locus-tag class description M1S23_00005 PF00308 Bacterial dnaA protein M1S23_00005 PF08299 Bacterial dnaA protein helix-turn-helix M1S23_00005 PF11638 DnaA N-terminal domain M1S23_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S23_00010 PF02767 DNA polymerase III beta subunit, central domain M1S23_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S23_00015 PF02463 RecF/RecN/SMC N terminal domain M1S23_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_00020 PF18053 DNA gyrase B subunit insert domain M1S23_00020 PF01751 Toprim domain M1S23_00020 PF00204 DNA gyrase B M1S23_00020 PF00986 DNA gyrase B subunit, carboxyl terminus M1S23_00030 PF09335 SNARE associated Golgi protein M1S23_00035 PF00005 ABC transporter M1S23_00035 PF12848 ABC transporter M1S23_00055 PF01521 Iron-sulphur cluster biosynthesis M1S23_00060 PF00561 alpha/beta hydrolase fold M1S23_00065 PF03702 Anhydro-N-acetylmuramic acid kinase M1S23_00070 PF00579 tRNA synthetases class I (W and Y) M1S23_00110 PF00209 Sodium:neurotransmitter symporter family M1S23_00120 PF01029 NusB family M1S23_00120 PF01189 16S rRNA methyltransferase RsmB/F M1S23_00125 PF00551 Formyl transferase M1S23_00125 PF02911 Formyl transferase, C-terminal domain M1S23_00130 PF00920 Dehydratase family M1S23_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_00145 PF03466 LysR substrate binding domain M1S23_00150 PF00860 Permease family M1S23_00155 PF00311 Phosphoenolpyruvate carboxylase M1S23_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S23_00160 PF00440 Bacterial regulatory proteins, tetR family M1S23_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S23_00170 PF00873 AcrB/AcrD/AcrF family M1S23_00180 PF00684 DnaJ central domain M1S23_00180 PF00226 DnaJ domain M1S23_00180 PF01556 DnaJ C terminal domain M1S23_00190 PF01113 Dihydrodipicolinate reductase, N-terminus M1S23_00190 PF05173 Dihydrodipicolinate reductase, C-terminus M1S23_00200 PF07690 Major Facilitator Superfamily M1S23_00205 PF00248 Aldo/keto reductase family M1S23_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_00210 PF03466 LysR substrate binding domain M1S23_00225 PF00392 Bacterial regulatory proteins, gntR family M1S23_00225 PF00155 Aminotransferase class I and II M1S23_00230 PF00107 Zinc-binding dehydrogenase M1S23_00230 PF08240 Alcohol dehydrogenase GroES-like domain M1S23_00235 PF03352 Methyladenine glycosylase M1S23_00250 PF10576 Iron-sulfur binding domain of endonuclease III M1S23_00250 PF00633 Helix-hairpin-helix motif M1S23_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S23_00250 PF14815 NUDIX domain M1S23_00265 PF07043 Protein of unknown function (DUF1328) M1S23_00270 PF03692 Putative zinc- or iron-chelating domain M1S23_00275 PF07995 Glucose / Sorbosone dehydrogenase M1S23_00280 PF12002 MgsA AAA+ ATPase C terminal M1S23_00280 PF16193 AAA C-terminal domain M1S23_00280 PF00004 ATPase family associated with various cellular activities (AAA) M1S23_00285 PF01226 Formate/nitrite transporter M1S23_00295 PF01259 SAICAR synthetase M1S23_00305 PF00701 Dihydrodipicolinate synthetase family M1S23_00310 PF00857 Isochorismatase family M1S23_00315 PF01758 Sodium Bile acid symporter family M1S23_00320 PF01554 MatE M1S23_00325 PF04463 Protein of unknown function (DUF523) M1S23_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S23_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S23_00345 PF14497 Glutathione S-transferase, C-terminal domain M1S23_00345 PF02798 Glutathione S-transferase, N-terminal domain M1S23_00355 PF00324 Amino acid permease M1S23_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S23_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S23_00375 PF00392 Bacterial regulatory proteins, gntR family M1S23_00375 PF07702 UTRA domain M1S23_00380 PF05962 HutD M1S23_00385 PF17392 Urocanase C-terminal domain M1S23_00385 PF17391 Urocanase N-terminal domain M1S23_00385 PF01175 Urocanase Rossmann-like domain M1S23_00390 PF00221 Aromatic amino acid lyase M1S23_00395 PF00324 Amino acid permease M1S23_00400 PF01979 Amidohydrolase family M1S23_00405 PF00491 Arginase family M1S23_00420 PF01177 Asp/Glu/Hydantoin racemase M1S23_00425 PF01380 SIS domain M1S23_00430 PF14602 Hexapeptide repeat of succinyl-transferase M1S23_00430 PF00132 Bacterial transferase hexapeptide (six repeats) M1S23_00430 PF12804 MobA-like NTP transferase domain M1S23_00435 PF04608 Phosphatidylglycerophosphatase A M1S23_00440 PF02769 AIR synthase related protein, C-terminal domain M1S23_00440 PF00586 AIR synthase related protein, N-terminal domain M1S23_00445 PF01029 NusB family M1S23_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase M1S23_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S23_00455 PF00925 GTP cyclohydrolase II M1S23_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase M1S23_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S23_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M1S23_00490 PF00581 Rhodanese-like domain M1S23_00495 PF02666 Phosphatidylserine decarboxylase M1S23_00500 PF03069 Acetamidase/Formamidase family M1S23_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_00520 PF00512 His Kinase A (phospho-acceptor) domain M1S23_00520 PF00989 PAS fold M1S23_00520 PF11808 Phosphate regulon sensor protein PhoR M1S23_00525 PF00072 Response regulator receiver domain M1S23_00525 PF00486 Transcriptional regulatory protein, C terminal M1S23_00535 PF00106 short chain dehydrogenase M1S23_00540 PF01554 MatE M1S23_00545 PF00155 Aminotransferase class I and II M1S23_00550 PF04286 Protein of unknown function (DUF445) M1S23_00565 PF04262 Glutamate-cysteine ligase M1S23_00570 PF02600 Disulfide bond formation protein DsbB M1S23_00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S23_00575 PF04717 Type VI secretion system, phage-baseplate injector M1S23_00575 PF13296 Putative type VI secretion system Rhs element Vgr M1S23_00580 PF00877 NlpC/P60 family M1S23_00580 PF01476 LysM domain M1S23_00595 PF05728 Uncharacterised protein family (UPF0227) M1S23_00600 PF01751 Toprim domain M1S23_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_00600 PF00986 DNA gyrase B subunit, carboxyl terminus M1S23_00600 PF00204 DNA gyrase B M1S23_00605 PF00106 short chain dehydrogenase M1S23_00610 PF04115 Ureidoglycolate lyase M1S23_00615 PF03561 Allantoicase repeat M1S23_00620 PF01494 FAD binding domain M1S23_00630 PF00860 Permease family M1S23_00635 PF00576 HIUase/Transthyretin family M1S23_00665 PF02683 Cytochrome C biogenesis protein transmembrane region M1S23_00665 PF11412 Disulphide bond corrector protein DsbC M1S23_00670 PF00990 Diguanylate cyclase, GGDEF domain M1S23_00670 PF07694 5TMR of 5TMR-LYT M1S23_00675 PF07859 alpha/beta hydrolase fold M1S23_00685 PF03960 ArsC family M1S23_00690 PF03372 Endonuclease/Exonuclease/phosphatase family M1S23_00695 PF00156 Phosphoribosyl transferase domain M1S23_00700 PF00593 TonB dependent receptor M1S23_00700 PF07715 TonB-dependent Receptor Plug Domain M1S23_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M1S23_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M1S23_00715 PF04101 Glycosyltransferase family 28 C-terminal domain M1S23_00715 PF03033 Glycosyltransferase family 28 N-terminal domain M1S23_00720 PF08245 Mur ligase middle domain M1S23_00720 PF01225 Mur ligase family, catalytic domain M1S23_00720 PF02875 Mur ligase family, glutamate ligase domain M1S23_00725 PF01820 D-ala D-ala ligase N-terminus M1S23_00725 PF07478 D-ala D-ala ligase C-terminus M1S23_00730 PF08478 POTRA domain, FtsQ-type M1S23_00730 PF03799 Cell division protein FtsQ M1S23_00735 PF02491 SHS2 domain inserted in FTSA M1S23_00740 PF12327 FtsZ family, C-terminal domain M1S23_00740 PF00091 Tubulin/FtsZ family, GTPase domain M1S23_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M1S23_00755 PF01551 Peptidase family M23 M1S23_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain M1S23_00760 PF00456 Transketolase, thiamine diphosphate binding domain M1S23_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S23_00765 PF00364 Biotin-requiring enzyme M1S23_00765 PF02817 e3 binding domain M1S23_00775 PF01169 Uncharacterized protein family UPF0016 M1S23_00780 PF00593 TonB dependent receptor M1S23_00780 PF07715 TonB-dependent Receptor Plug Domain M1S23_00785 PF01613 Flavin reductase like domain M1S23_00785 PF00258 Flavodoxin M1S23_00790 PF03692 Putative zinc- or iron-chelating domain M1S23_00795 PF00478 IMP dehydrogenase / GMP reductase domain M1S23_00795 PF00571 CBS domain M1S23_00800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S23_00800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S23_00800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S23_00800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S23_00805 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M1S23_00805 PF01243 Pyridoxamine 5'-phosphate oxidase M1S23_00810 PF01368 DHH family M1S23_00810 PF02272 DHHA1 domain M1S23_00810 PF17768 RecJ OB domain M1S23_00830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S23_00835 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M1S23_00840 PF04452 RNA methyltransferase M1S23_00845 PF00924 Mechanosensitive ion channel M1S23_00855 PF16177 Acetyl-coenzyme A synthetase N-terminus M1S23_00855 PF13193 AMP-binding enzyme C-terminal domain M1S23_00855 PF00501 AMP-binding enzyme M1S23_00860 PF00857 Isochorismatase family M1S23_00865 PF01037 Lrp/AsnC ligand binding domain M1S23_00870 PF00872 Transposase, Mutator family M1S23_00875 PF00296 Luciferase-like monooxygenase M1S23_00880 PF03358 NADPH-dependent FMN reductase M1S23_00885 PF00196 Bacterial regulatory proteins, luxR family M1S23_00885 PF00072 Response regulator receiver domain M1S23_00895 PF00512 His Kinase A (phospho-acceptor) domain M1S23_00895 PF00672 HAMP domain M1S23_00895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_00895 PF01627 Hpt domain M1S23_00895 PF00072 Response regulator receiver domain M1S23_00900 PF04341 Protein of unknown function, DUF485 M1S23_00905 PF00474 Sodium:solute symporter family M1S23_00915 PF02028 BCCT, betaine/carnitine/choline family transporter M1S23_00925 PF00990 Diguanylate cyclase, GGDEF domain M1S23_00935 PF00005 ABC transporter M1S23_00935 PF17755 UvrA DNA-binding domain M1S23_00935 PF17760 UvrA interaction domain M1S23_00940 PF16925 Tetracyclin repressor-like, C-terminal domain M1S23_00940 PF00440 Bacterial regulatory proteins, tetR family M1S23_00945 PF08240 Alcohol dehydrogenase GroES-like domain M1S23_00945 PF00107 Zinc-binding dehydrogenase M1S23_00960 PF06942 GlpM protein M1S23_00965 PF02581 Thiamine monophosphate synthase M1S23_00965 PF03070 TENA/THI-4/PQQC family M1S23_00965 PF08543 Phosphomethylpyrimidine kinase M1S23_00975 PF07690 Major Facilitator Superfamily M1S23_00980 PF00436 Single-strand binding protein family M1S23_00990 PF03591 AzlC protein M1S23_01000 PF00324 Amino acid permease M1S23_01005 PF00392 Bacterial regulatory proteins, gntR family M1S23_01005 PF00155 Aminotransferase class I and II M1S23_01010 PF00202 Aminotransferase class-III M1S23_01015 PF00171 Aldehyde dehydrogenase family M1S23_01020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_01025 PF00857 Isochorismatase family M1S23_01030 PF02678 Pirin M1S23_01030 PF05726 Pirin C-terminal cupin domain M1S23_01035 PF01593 Flavin containing amine oxidoreductase M1S23_01055 PF07690 Major Facilitator Superfamily M1S23_01060 PF03466 LysR substrate binding domain M1S23_01060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_01080 PF00248 Aldo/keto reductase family M1S23_01085 PF02311 AraC-like ligand binding domain M1S23_01085 PF12833 Helix-turn-helix domain M1S23_01115 PF01638 HxlR-like helix-turn-helix M1S23_01120 PF02525 Flavodoxin-like fold M1S23_01140 PF02705 K+ potassium transporter M1S23_01165 PF00230 Major intrinsic protein M1S23_01185 PF00977 Histidine biosynthesis protein M1S23_01190 PF01636 Phosphotransferase enzyme family M1S23_01205 PF03992 Antibiotic biosynthesis monooxygenase M1S23_01220 PF00977 Histidine biosynthesis protein M1S23_01235 PF00117 Glutamine amidotransferase class-I M1S23_01240 PF00475 Imidazoleglycerol-phosphate dehydratase M1S23_01260 PF00583 Acetyltransferase (GNAT) family M1S23_01265 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M1S23_01265 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M1S23_01275 PF00672 HAMP domain M1S23_01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_01275 PF00512 His Kinase A (phospho-acceptor) domain M1S23_01280 PF00486 Transcriptional regulatory protein, C terminal M1S23_01280 PF00072 Response regulator receiver domain M1S23_01285 PF00575 S1 RNA binding domain M1S23_01285 PF09371 Tex-like protein N-terminal domain M1S23_01285 PF17674 HHH domain M1S23_01285 PF16921 Tex protein YqgF-like domain M1S23_01290 PF01740 STAS domain M1S23_01290 PF00916 Sulfate permease family M1S23_01295 PF00106 short chain dehydrogenase M1S23_01300 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S23_01305 PF00005 ABC transporter M1S23_01305 PF12848 ABC transporter M1S23_01330 PF04191 Phospholipid methyltransferase M1S23_01350 PF00529 HlyD membrane-fusion protein of T1SS M1S23_01350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S23_01355 PF00873 AcrB/AcrD/AcrF family M1S23_01360 PF01545 Cation efflux family M1S23_01390 PF00324 Amino acid permease M1S23_01405 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S23_01420 PF01795 MraW methylase family M1S23_01430 PF00905 Penicillin binding protein transpeptidase domain M1S23_01430 PF03717 Penicillin-binding Protein dimerisation domain M1S23_01435 PF08245 Mur ligase middle domain M1S23_01435 PF02875 Mur ligase family, glutamate ligase domain M1S23_01435 PF01225 Mur ligase family, catalytic domain M1S23_01440 PF08245 Mur ligase middle domain M1S23_01440 PF02875 Mur ligase family, glutamate ligase domain M1S23_01440 PF01225 Mur ligase family, catalytic domain M1S23_01445 PF00953 Glycosyl transferase family 4 M1S23_01455 PF13847 Methyltransferase domain M1S23_01460 PF17092 Penicillin-binding protein OB-like domain M1S23_01460 PF00905 Penicillin binding protein transpeptidase domain M1S23_01460 PF00912 Transglycosylase M1S23_01465 PF11104 Type IV pilus assembly protein PilM; M1S23_01470 PF05137 Fimbrial assembly protein (PilN) M1S23_01475 PF04350 Pilus assembly protein, PilO M1S23_01485 PF11741 AMIN domain M1S23_01485 PF00263 Bacterial type II and III secretion system protein M1S23_01485 PF03958 Bacterial type II/III secretion system short domain M1S23_01485 PF07660 Secretin and TonB N terminus short domain M1S23_01490 PF01202 Shikimate kinase M1S23_01495 PF01761 3-dehydroquinate synthase M1S23_01505 PF01645 Conserved region in glutamate synthase M1S23_01505 PF00310 Glutamine amidotransferases class-II M1S23_01505 PF04898 Glutamate synthase central domain M1S23_01505 PF01493 GXGXG motif M1S23_01510 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M1S23_01510 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_01520 PF04011 LemA family M1S23_01525 PF04536 TPM domain M1S23_01535 PF07963 Prokaryotic N-terminal methylation motif M1S23_01535 PF00114 Pilin (bacterial filament) M1S23_01545 PF11846 Virulence factor membrane-bound polymerase, C-terminal M1S23_01545 PF15864 Protein glycosylation ligase M1S23_01545 PF04932 O-Antigen ligase M1S23_01555 PF00210 Ferritin-like domain M1S23_01560 PF04324 BFD-like [2Fe-2S] binding domain M1S23_01565 PF01042 Endoribonuclease L-PSP M1S23_01570 PF13291 ACT domain M1S23_01570 PF04607 Region found in RelA / SpoT proteins M1S23_01570 PF02824 TGS domain M1S23_01580 PF01192 RNA polymerase Rpb6 M1S23_01585 PF00625 Guanylate kinase M1S23_01590 PF02401 LytB protein M1S23_01630 PF00886 Ribosomal protein S16 M1S23_01635 PF01782 RimM N-terminal domain M1S23_01635 PF05239 PRC-barrel domain M1S23_01640 PF01746 tRNA (Guanine-1)-methyltransferase M1S23_01645 PF01245 Ribosomal protein L19 M1S23_01650 PF00561 alpha/beta hydrolase fold M1S23_01660 PF09157 Pseudouridine synthase II TruB, C-terminal M1S23_01660 PF01509 TruB family pseudouridylate synthase (N terminal domain) M1S23_01660 PF16198 tRNA pseudouridylate synthase B C-terminal domain M1S23_01665 PF01925 Sulfite exporter TauE/SafE M1S23_01675 PF00892 EamA-like transporter family M1S23_01680 PF00892 EamA-like transporter family M1S23_01685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S23_01685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S23_01690 PF01565 FAD binding domain M1S23_01690 PF02913 FAD linked oxidases, C-terminal domain M1S23_01700 PF03992 Antibiotic biosynthesis monooxygenase M1S23_01705 PF02525 Flavodoxin-like fold M1S23_01715 PF07690 Major Facilitator Superfamily M1S23_01720 PF12805 FUSC-like inner membrane protein yccS M1S23_01725 PF00080 Copper/zinc superoxide dismutase (SODC) M1S23_01730 PF01594 AI-2E family transporter M1S23_01735 PF13614 AAA domain M1S23_01765 PF00324 Amino acid permease M1S23_01770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S23_01770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S23_01775 PF00202 Aminotransferase class-III M1S23_01780 PF04958 Arginine N-succinyltransferase beta subunit M1S23_01785 PF00171 Aldehyde dehydrogenase family M1S23_01790 PF04996 Succinylarginine dihydrolase M1S23_01795 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M1S23_01810 PF00082 Subtilase family M1S23_01810 PF05922 Peptidase inhibitor I9 M1S23_01825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_01825 PF03466 LysR substrate binding domain M1S23_01830 PF00892 EamA-like transporter family M1S23_01840 PF02092 Glycyl-tRNA synthetase beta subunit M1S23_01840 PF05746 DALR anticodon binding domain M1S23_01845 PF02091 Glycyl-tRNA synthetase alpha subunit M1S23_01870 PF00571 CBS domain M1S23_01875 PF04024 PspC domain M1S23_01885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_01885 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_01885 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S23_01885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_01895 PF08501 Shikimate dehydrogenase substrate binding domain M1S23_01895 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M1S23_01895 PF01488 Shikimate / quinate 5-dehydrogenase M1S23_01900 PF01218 Coproporphyrinogen III oxidase M1S23_01905 PF00925 GTP cyclohydrolase II M1S23_01910 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M1S23_01910 PF02779 Transketolase, pyrimidine binding domain M1S23_01910 PF02780 Transketolase, C-terminal domain M1S23_01915 PF00459 Inositol monophosphatase family M1S23_01920 PF12343 Cold shock protein DEAD box A M1S23_01920 PF03880 DbpA RNA binding domain M1S23_01920 PF00270 DEAD/DEAH box helicase M1S23_01920 PF00271 Helicase conserved C-terminal domain M1S23_01930 PF00005 ABC transporter M1S23_01935 PF02405 Permease MlaE M1S23_01945 PF05494 MlaC protein M1S23_01955 PF01544 CorA-like Mg2+ transporter protein M1S23_01960 PF03641 Possible lysine decarboxylase M1S23_01965 PF00293 NUDIX domain M1S23_01970 PF00156 Phosphoribosyl transferase domain M1S23_01975 PF00270 DEAD/DEAH box helicase M1S23_01975 PF00271 Helicase conserved C-terminal domain M1S23_01975 PF17191 RecG wedge domain M1S23_01990 PF01553 Acyltransferase M1S23_02000 PF00375 Sodium:dicarboxylate symporter family M1S23_02010 PF01926 50S ribosome-binding GTPase M1S23_02015 PF02082 Transcriptional regulator M1S23_02020 PF00970 Oxidoreductase FAD-binding domain M1S23_02020 PF00042 Globin M1S23_02020 PF00175 Oxidoreductase NAD-binding domain M1S23_02035 PF00117 Glutamine amidotransferase class-I M1S23_02040 PF00338 Ribosomal protein S10p/S20e M1S23_02045 PF00297 Ribosomal protein L3 M1S23_02050 PF00573 Ribosomal protein L4/L1 family M1S23_02055 PF00276 Ribosomal protein L23 M1S23_02060 PF03947 Ribosomal Proteins L2, C-terminal domain M1S23_02060 PF00181 Ribosomal Proteins L2, RNA binding domain M1S23_02065 PF00203 Ribosomal protein S19 M1S23_02070 PF00237 Ribosomal protein L22p/L17e M1S23_02080 PF00252 Ribosomal protein L16p/L10e M1S23_02085 PF00831 Ribosomal L29 protein M1S23_02090 PF00366 Ribosomal protein S17 M1S23_02095 PF00238 Ribosomal protein L14p/L23e M1S23_02100 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M1S23_02100 PF00467 KOW motif M1S23_02105 PF00281 Ribosomal protein L5 M1S23_02105 PF00673 ribosomal L5P family C-terminus M1S23_02110 PF00253 Ribosomal protein S14p/S29e M1S23_02115 PF00410 Ribosomal protein S8 M1S23_02120 PF00347 Ribosomal protein L6 M1S23_02125 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M1S23_02130 PF00333 Ribosomal protein S5, N-terminal domain M1S23_02130 PF03719 Ribosomal protein S5, C-terminal domain M1S23_02135 PF00327 Ribosomal protein L30p/L7e M1S23_02140 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M1S23_02145 PF00344 SecY translocase M1S23_02150 PF00444 Ribosomal protein L36 M1S23_02155 PF00416 Ribosomal protein S13/S18 M1S23_02160 PF00411 Ribosomal protein S11 M1S23_02165 PF00163 Ribosomal protein S4/S9 N-terminal domain M1S23_02165 PF01479 S4 domain M1S23_02170 PF01000 RNA polymerase Rpb3/RpoA insert domain M1S23_02170 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M1S23_02170 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M1S23_02175 PF01196 Ribosomal protein L17 M1S23_02180 PF00743 Flavin-binding monooxygenase-like M1S23_02185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_02185 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_02185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_02190 PF03937 Flavinator of succinate dehydrogenase M1S23_02220 PF09526 Probable metal-binding protein (DUF2387) M1S23_02225 PF01432 Peptidase family M3 M1S23_02230 PF08461 Ribonuclease R winged-helix domain M1S23_02230 PF00773 RNB domain M1S23_02230 PF00575 S1 RNA binding domain M1S23_02230 PF08206 Ribonuclease B OB domain M1S23_02230 PF17876 Cold shock domain M1S23_02275 PF01557 Fumarylacetoacetate (FAA) hydrolase family M1S23_02280 PF12833 Helix-turn-helix domain M1S23_02285 PF00892 EamA-like transporter family M1S23_02290 PF03631 Virulence factor BrkB M1S23_02295 PF03358 NADPH-dependent FMN reductase M1S23_02320 PF02130 Uncharacterized protein family UPF0054 M1S23_02325 PF02562 PhoH-like protein M1S23_02330 PF04055 Radical SAM superfamily M1S23_02330 PF01938 TRAM domain M1S23_02330 PF00919 Uncharacterized protein family UPF0004 M1S23_02335 PF10145 Phage-related minor tail protein M1S23_02335 PF01551 Peptidase family M23 M1S23_02335 PF01464 Transglycosylase SLT domain M1S23_02345 PF00056 lactate/malate dehydrogenase, NAD binding domain M1S23_02345 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1S23_02365 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M1S23_02370 PF01066 CDP-alcohol phosphatidyltransferase M1S23_02415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_02415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_02415 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_02420 PF00440 Bacterial regulatory proteins, tetR family M1S23_02420 PF17932 Tetracyclin repressor-like, C-terminal domain M1S23_02435 PF01039 Carboxyl transferase domain M1S23_02440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_02440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_02440 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_02450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S23_02450 PF00364 Biotin-requiring enzyme M1S23_02450 PF00289 Biotin carboxylase, N-terminal domain M1S23_02450 PF02785 Biotin carboxylase C-terminal domain M1S23_02460 PF04386 Stringent starvation protein B M1S23_02465 PF00043 Glutathione S-transferase, C-terminal domain M1S23_02465 PF13417 Glutathione S-transferase, N-terminal domain M1S23_02470 PF00380 Ribosomal protein S9/S16 M1S23_02475 PF00572 Ribosomal protein L13 M1S23_02480 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M1S23_02485 PF00398 Ribosomal RNA adenine dimethylase M1S23_02490 PF00149 Calcineurin-like phosphoesterase M1S23_02510 PF13167 GTP-binding GTPase N-terminal M1S23_02510 PF16360 GTP-binding GTPase Middle Region M1S23_02510 PF01926 50S ribosome-binding GTPase M1S23_02520 PF13091 PLD-like domain M1S23_02525 PF00149 Calcineurin-like phosphoesterase M1S23_02525 PF10518 TAT (twin-arginine translocation) pathway signal sequence M1S23_02530 PF00691 OmpA family M1S23_02530 PF01389 OmpA-like transmembrane domain M1S23_02535 PF17152 Periplasmic sensor domain M1S23_02535 PF00990 Diguanylate cyclase, GGDEF domain M1S23_02570 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_02570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S23_02580 PF04273 Putative phosphatase (DUF442) M1S23_02580 PF00753 Metallo-beta-lactamase superfamily M1S23_02585 PF00561 alpha/beta hydrolase fold M1S23_02590 PF00085 Thioredoxin M1S23_02595 PF03061 Thioesterase superfamily M1S23_02605 PF04461 Protein of unknown function (DUF520) M1S23_02615 PF01266 FAD dependent oxidoreductase M1S23_02615 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S23_02625 PF03795 YCII-related domain M1S23_02630 PF04279 Intracellular septation protein A M1S23_02635 PF02811 PHP domain M1S23_02640 PF01062 Bestrophin, RFP-TM, chloride channel M1S23_02645 PF04002 RadC-like JAB domain M1S23_02650 PF02441 Flavoprotein M1S23_02650 PF04127 DNA / pantothenate metabolism flavoprotein M1S23_02655 PF02355 Protein export membrane protein M1S23_02655 PF07549 SecD/SecF GG Motif M1S23_02660 PF02355 Protein export membrane protein M1S23_02660 PF13721 SecD export protein N-terminal TM region M1S23_02660 PF07549 SecD/SecF GG Motif M1S23_02665 PF02699 Preprotein translocase subunit M1S23_02670 PF01702 Queuine tRNA-ribosyltransferase M1S23_02685 PF02547 Queuosine biosynthesis protein M1S23_02695 PF07689 KaiB domain M1S23_02695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_02695 PF00512 His Kinase A (phospho-acceptor) domain M1S23_02700 PF08335 GlnD PII-uridylyltransferase M1S23_02700 PF03710 Glutamate-ammonia ligase adenylyltransferase M1S23_02705 PF01063 Amino-transferase class IV M1S23_02720 PF01522 Polysaccharide deacetylase M1S23_02730 PF13439 Glycosyltransferase Family 4 M1S23_02730 PF00534 Glycosyl transferases group 1 M1S23_02755 PF17101 Stealth protein CR1, conserved region 1 M1S23_02755 PF17102 Stealth protein CR3, conserved region 3 M1S23_02755 PF11380 Stealth protein CR2, conserved region 2 M1S23_02760 PF02938 GAD domain M1S23_02760 PF01336 OB-fold nucleic acid binding domain M1S23_02760 PF00152 tRNA synthetases class II (D, K and N) M1S23_02770 PF07715 TonB-dependent Receptor Plug Domain M1S23_02770 PF00593 TonB dependent receptor M1S23_02790 PF06146 Phosphate-starvation-inducible E M1S23_02795 PF02798 Glutathione S-transferase, N-terminal domain M1S23_02795 PF00043 Glutathione S-transferase, C-terminal domain M1S23_02800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_02800 PF03466 LysR substrate binding domain M1S23_02805 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_02805 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S23_02805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_02805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_02810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_02810 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S23_02810 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_02810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_02820 PF00512 His Kinase A (phospho-acceptor) domain M1S23_02820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_02820 PF00672 HAMP domain M1S23_02825 PF00486 Transcriptional regulatory protein, C terminal M1S23_02825 PF00072 Response regulator receiver domain M1S23_02830 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M1S23_02850 PF01923 Cobalamin adenosyltransferase M1S23_02855 PF07715 TonB-dependent Receptor Plug Domain M1S23_02855 PF00593 TonB dependent receptor M1S23_02860 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M1S23_02865 PF00291 Pyridoxal-phosphate dependent enzyme M1S23_02890 PF00290 Tryptophan synthase alpha chain M1S23_02895 PF01039 Carboxyl transferase domain M1S23_02900 PF08245 Mur ligase middle domain M1S23_02900 PF02875 Mur ligase family, glutamate ligase domain M1S23_02915 PF00753 Metallo-beta-lactamase superfamily M1S23_02920 PF00578 AhpC/TSA family M1S23_02920 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S23_02925 PF02810 SEC-C motif M1S23_02925 PF07517 SecA DEAD-like domain M1S23_02925 PF07516 SecA Wing and Scaffold domain M1S23_02925 PF01043 SecA preprotein cross-linking domain M1S23_02935 PF07690 Major Facilitator Superfamily M1S23_02935 PF00083 Sugar (and other) transporter M1S23_02940 PF03006 Haemolysin-III related M1S23_02965 PF00378 Enoyl-CoA hydratase/isomerase M1S23_02965 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S23_02965 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S23_02970 PF00108 Thiolase, N-terminal domain M1S23_02970 PF02803 Thiolase, C-terminal domain M1S23_02975 PF12833 Helix-turn-helix domain M1S23_02975 PF02311 AraC-like ligand binding domain M1S23_02980 PF02515 CoA-transferase family III M1S23_02985 PF04966 Carbohydrate-selective porin, OprB family M1S23_02990 PF01011 PQQ enzyme repeat M1S23_02995 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S23_02995 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S23_03005 PF00893 Small Multidrug Resistance protein M1S23_03015 PF00108 Thiolase, N-terminal domain M1S23_03015 PF02803 Thiolase, C-terminal domain M1S23_03025 PF13505 Outer membrane protein beta-barrel domain M1S23_03025 PF00691 OmpA family M1S23_03035 PF01139 tRNA-splicing ligase RtcB M1S23_03040 PF00324 Amino acid permease M1S23_03045 PF05175 Methyltransferase small domain M1S23_03045 PF08468 Methyltransferase small domain N-terminal M1S23_03050 PF00860 Permease family M1S23_03055 PF00679 Elongation factor G C-terminus M1S23_03055 PF00009 Elongation factor Tu GTP binding domain M1S23_03055 PF03144 Elongation factor Tu domain 2 M1S23_03060 PF01741 Large-conductance mechanosensitive channel, MscL M1S23_03075 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M1S23_03075 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M1S23_03075 PF06827 Zinc finger found in FPG and IleRS M1S23_03080 PF02245 Methylpurine-DNA glycosylase (MPG) M1S23_03100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S23_03115 PF13098 Thioredoxin-like domain M1S23_03115 PF10411 Disulfide bond isomerase protein N-terminus M1S23_03120 PF01571 Aminomethyltransferase folate-binding domain M1S23_03130 PF04343 Protein of unknown function, DUF488 M1S23_03135 PF03831 PhnA domain M1S23_03135 PF08274 PhnA Zinc-Ribbon M1S23_03140 PF07411 Domain of unknown function (DUF1508) M1S23_03145 PF03129 Anticodon binding domain M1S23_03145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S23_03145 PF04073 Aminoacyl-tRNA editing domain M1S23_03150 PF00873 AcrB/AcrD/AcrF family M1S23_03165 PF00072 Response regulator receiver domain M1S23_03170 PF00072 Response regulator receiver domain M1S23_03175 PF01584 CheW-like domain M1S23_03180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M1S23_03180 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M1S23_03185 PF00072 Response regulator receiver domain M1S23_03185 PF01584 CheW-like domain M1S23_03185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_03185 PF01627 Hpt domain M1S23_03195 PF01546 Peptidase family M20/M25/M40 M1S23_03195 PF07687 Peptidase dimerisation domain M1S23_03200 PF08085 Entericidin EcnA/B family M1S23_03210 PF04304 Protein of unknown function (DUF454) M1S23_03215 PF03734 L,D-transpeptidase catalytic domain M1S23_03215 PF17969 L,D-transpeptidase C-terminal domain M1S23_03255 PF00667 FAD binding domain M1S23_03255 PF00258 Flavodoxin M1S23_03255 PF00175 Oxidoreductase NAD-binding domain M1S23_03265 PF12805 FUSC-like inner membrane protein yccS M1S23_03270 PF07690 Major Facilitator Superfamily M1S23_03275 PF00881 Nitroreductase family M1S23_03290 PF01235 Sodium:alanine symporter family M1S23_03295 PF01734 Patatin-like phospholipase M1S23_03300 PF13291 ACT domain M1S23_03300 PF00291 Pyridoxal-phosphate dependent enzyme M1S23_03305 PF05992 SbmA/BacA-like family M1S23_03335 PF02637 GatB domain M1S23_03335 PF02934 GatB/GatE catalytic domain M1S23_03340 PF01425 Amidase M1S23_03345 PF02686 Glu-tRNAGln amidotransferase C subunit M1S23_03355 PF04085 rod shape-determining protein MreC M1S23_03360 PF04093 rod shape-determining protein MreD M1S23_03365 PF02545 Maf-like protein M1S23_03370 PF10150 Ribonuclease E/G family M1S23_03370 PF00575 S1 RNA binding domain M1S23_03380 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain M1S23_03380 PF06974 Protein of unknown function (DUF1298) M1S23_03385 PF01507 Phosphoadenosine phosphosulfate reductase family M1S23_03400 PF02525 Flavodoxin-like fold M1S23_03420 PF02673 Bacitracin resistance protein BacA M1S23_03425 PF12833 Helix-turn-helix domain M1S23_03425 PF06719 AraC-type transcriptional regulator N-terminus M1S23_03430 PF00698 Acyl transferase domain M1S23_03430 PF14765 Polyketide synthase dehydratase M1S23_03430 PF00550 Phosphopantetheine attachment site M1S23_03430 PF08659 KR domain M1S23_03430 PF08240 Alcohol dehydrogenase GroES-like domain M1S23_03430 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S23_03430 PF16197 Ketoacyl-synthetase C-terminal extension M1S23_03430 PF09277 Erythronolide synthase, docking M1S23_03430 PF08990 Erythronolide synthase docking M1S23_03430 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S23_03435 PF01965 DJ-1/PfpI family M1S23_03445 PF00324 Amino acid permease M1S23_03450 PF04303 PrpF protein M1S23_03455 PF00348 Polyprenyl synthetase M1S23_03460 PF04237 YjbR M1S23_03465 PF01145 SPFH domain / Band 7 family M1S23_03475 PF01734 Patatin-like phospholipase M1S23_03495 PF08019 Phosphoethanolamine transferase EptA/EptB M1S23_03495 PF00884 Sulfatase M1S23_03500 PF00072 Response regulator receiver domain M1S23_03500 PF00486 Transcriptional regulatory protein, C terminal M1S23_03505 PF08521 Two-component sensor kinase N-terminal M1S23_03505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_03505 PF00512 His Kinase A (phospho-acceptor) domain M1S23_03515 PF00909 Ammonium Transporter Family M1S23_03520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_03520 PF03466 LysR substrate binding domain M1S23_03540 PF08264 Anticodon-binding domain of tRNA M1S23_03540 PF10458 Valyl tRNA synthetase tRNA binding arm M1S23_03540 PF00133 tRNA synthetases class I (I, L, M and V) M1S23_03560 PF01906 Putative heavy-metal-binding M1S23_03565 PF01906 Putative heavy-metal-binding M1S23_03570 PF02321 Outer membrane efflux protein M1S23_03575 PF00873 AcrB/AcrD/AcrF family M1S23_03580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S23_03580 PF00529 HlyD membrane-fusion protein of T1SS M1S23_03585 PF01569 PAP2 superfamily M1S23_03595 PF00348 Polyprenyl synthetase M1S23_03605 PF00829 Ribosomal prokaryotic L21 protein M1S23_03610 PF01016 Ribosomal L27 protein M1S23_03615 PF03548 Outer membrane lipoprotein carrier protein LolA M1S23_03625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S23_03625 PF02403 Seryl-tRNA synthetase N-terminal domain M1S23_03630 PF10414 Sirohaem synthase dimerisation region M1S23_03630 PF14824 Sirohaem biosynthesis protein central M1S23_03630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S23_03635 PF00588 SpoU rRNA Methylase family M1S23_03640 PF01638 HxlR-like helix-turn-helix M1S23_03645 PF03358 NADPH-dependent FMN reductase M1S23_03650 PF13520 Amino acid permease M1S23_03655 PF00465 Iron-containing alcohol dehydrogenase M1S23_03665 PF03099 Biotin/lipoate A/B protein ligase family M1S23_03670 PF04359 Protein of unknown function (DUF493) M1S23_03675 PF04546 Sigma-70, non-essential region M1S23_03675 PF03979 Sigma-70 factor, region 1.1 M1S23_03675 PF00140 Sigma-70 factor, region 1.2 M1S23_03675 PF04542 Sigma-70 region 2 M1S23_03675 PF04539 Sigma-70 region 3 M1S23_03675 PF04545 Sigma-70, region 4 M1S23_03695 PF00581 Rhodanese-like domain M1S23_03695 PF17773 UPF0176 acylphosphatase like domain M1S23_03705 PF00285 Citrate synthase, C-terminal domain M1S23_03710 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S23_03715 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S23_03720 PF00890 FAD binding domain M1S23_03720 PF02910 Fumarate reductase flavoprotein C-term M1S23_03725 PF13085 2Fe-2S iron-sulfur cluster binding domain M1S23_03740 PF02779 Transketolase, pyrimidine binding domain M1S23_03740 PF16078 2-oxoglutarate dehydrogenase N-terminus M1S23_03740 PF00676 Dehydrogenase E1 component M1S23_03740 PF16870 2-oxoglutarate dehydrogenase C-terminal M1S23_03745 PF02817 e3 binding domain M1S23_03745 PF00364 Biotin-requiring enzyme M1S23_03745 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S23_03750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S23_03750 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_03755 PF08442 ATP-grasp domain M1S23_03755 PF00549 CoA-ligase M1S23_03760 PF02629 CoA binding domain M1S23_03760 PF00549 CoA-ligase M1S23_03765 PF00579 tRNA synthetases class I (W and Y) M1S23_03770 PF05661 Protein of unknown function (DUF808) M1S23_03775 PF04228 Putative neutral zinc metallopeptidase M1S23_03780 PF00999 Sodium/hydrogen exchanger family M1S23_03795 PF09587 Bacterial capsule synthesis protein PGA_cap M1S23_03805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S23_03810 PF00582 Universal stress protein family M1S23_03815 PF00132 Bacterial transferase hexapeptide (six repeats) M1S23_03820 PF03449 Transcription elongation factor, N-terminal M1S23_03820 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S23_03825 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M1S23_03825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S23_03825 PF02142 MGS-like domain M1S23_03830 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M1S23_03830 PF00117 Glutamine amidotransferase class-I M1S23_03845 PF01985 CRS1 / YhbY (CRM) domain M1S23_03850 PF01728 FtsJ-like methyltransferase M1S23_03855 PF00004 ATPase family associated with various cellular activities (AAA) M1S23_03855 PF17862 AAA+ lid domain M1S23_03855 PF06480 FtsH Extracellular M1S23_03855 PF01434 Peptidase family M41 M1S23_03860 PF00809 Pterin binding enzyme M1S23_03880 PF09423 PhoD-like phosphatase M1S23_03880 PF16655 PhoD-like phosphatase, N-terminal domain M1S23_03895 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M1S23_03895 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M1S23_03910 PF00083 Sugar (and other) transporter M1S23_03915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1S23_03915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1S23_03920 PF01266 FAD dependent oxidoreductase M1S23_03920 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M1S23_03925 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1S23_03925 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1S23_03930 PF00781 Diacylglycerol kinase catalytic domain M1S23_03935 PF00149 Calcineurin-like phosphoesterase M1S23_03945 PF00166 Chaperonin 10 Kd subunit M1S23_03950 PF00118 TCP-1/cpn60 chaperonin family M1S23_03955 PF01219 Prokaryotic diacylglycerol kinase M1S23_03965 PF03009 Glycerophosphoryl diester phosphodiesterase family M1S23_03970 PF00873 AcrB/AcrD/AcrF family M1S23_03980 PF01435 Peptidase family M48 M1S23_03985 PF01464 Transglycosylase SLT domain M1S23_03990 PF01171 PP-loop family M1S23_04000 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S23_04000 PF01464 Transglycosylase SLT domain M1S23_04005 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S23_04005 PF03449 Transcription elongation factor, N-terminal M1S23_04020 PF00501 AMP-binding enzyme M1S23_04020 PF13193 AMP-binding enzyme C-terminal domain M1S23_04020 PF00668 Condensation domain M1S23_04020 PF00550 Phosphopantetheine attachment site M1S23_04020 PF00975 Thioesterase domain M1S23_04050 PF00881 Nitroreductase family M1S23_04065 PF02595 Glycerate kinase family M1S23_04070 PF00384 Molybdopterin oxidoreductase M1S23_04075 PF02634 FdhD/NarQ family M1S23_04080 PF06803 Protein of unknown function (DUF1232) M1S23_04085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S23_04085 PF11890 Domain of unknown function (DUF3410) M1S23_04085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S23_04090 PF00152 tRNA synthetases class II (D, K and N) M1S23_04100 PF18073 Rubredoxin metal binding domain M1S23_04105 PF00324 Amino acid permease M1S23_04115 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M1S23_04115 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M1S23_04120 PF01678 Diaminopimelate epimerase M1S23_04125 PF01810 LysE type translocator M1S23_04130 PF02899 Phage integrase, N-terminal SAM-like domain M1S23_04130 PF00589 Phage integrase family M1S23_04135 PF01012 Electron transfer flavoprotein domain M1S23_04140 PF00766 Electron transfer flavoprotein FAD-binding domain M1S23_04140 PF01012 Electron transfer flavoprotein domain M1S23_04145 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S23_04145 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S23_04160 PF00535 Glycosyl transferase family 2 M1S23_04180 PF13533 Biotin-lipoyl like M1S23_04190 PF00266 Aminotransferase class-V M1S23_04205 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M1S23_04215 PF02687 FtsX-like permease family M1S23_04215 PF12704 MacB-like periplasmic core domain M1S23_04220 PF00005 ABC transporter M1S23_04225 PF03772 Competence protein M1S23_04225 PF13567 Domain of unknown function (DUF4131) M1S23_04225 PF00753 Metallo-beta-lactamase superfamily M1S23_04235 PF06965 Na+/H+ antiporter 1 M1S23_04235 PF01343 Peptidase family S49 M1S23_04240 PF12697 Alpha/beta hydrolase family M1S23_04245 PF00551 Formyl transferase M1S23_04250 PF02769 AIR synthase related protein, C-terminal domain M1S23_04250 PF00586 AIR synthase related protein, N-terminal domain M1S23_04255 PF01594 AI-2E family transporter M1S23_04260 PF11638 DnaA N-terminal domain M1S23_04260 PF00308 Bacterial dnaA protein M1S23_04260 PF08299 Bacterial dnaA protein helix-turn-helix M1S23_04290 PF00588 SpoU rRNA Methylase family M1S23_04290 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S23_04295 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M1S23_04305 PF00691 OmpA family M1S23_04310 PF04052 TolB amino-terminal domain M1S23_04310 PF07676 WD40-like Beta Propeller Repeat M1S23_04320 PF02472 Biopolymer transport protein ExbD/TolR M1S23_04325 PF01618 MotA/TolQ/ExbB proton channel family M1S23_04330 PF03061 Thioesterase superfamily M1S23_04335 PF07687 Peptidase dimerisation domain M1S23_04335 PF01546 Peptidase family M20/M25/M40 M1S23_04340 PF05496 Holliday junction DNA helicase RuvB P-loop domain M1S23_04340 PF05491 RuvB C-terminal winged helix domain M1S23_04340 PF17864 RuvB AAA lid domain M1S23_04345 PF01330 RuvA N terminal domain M1S23_04345 PF07499 RuvA, C-terminal domain M1S23_04350 PF01966 HD domain M1S23_04355 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M1S23_04355 PF02769 AIR synthase related protein, C-terminal domain M1S23_04355 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M1S23_04360 PF07690 Major Facilitator Superfamily M1S23_04365 PF01784 NIF3 (NGG1p interacting factor 3) M1S23_04370 PF00378 Enoyl-CoA hydratase/isomerase M1S23_04375 PF00293 NUDIX domain M1S23_04375 PF01467 Cytidylyltransferase-like M1S23_04385 PF00578 AhpC/TSA family M1S23_04400 PF06508 Queuosine biosynthesis protein QueC M1S23_04410 PF00132 Bacterial transferase hexapeptide (six repeats) M1S23_04410 PF14602 Hexapeptide repeat of succinyl-transferase M1S23_04410 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M1S23_04420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_04420 PF03466 LysR substrate binding domain M1S23_04425 PF00005 ABC transporter M1S23_04425 PF12857 TOBE-like domain M1S23_04430 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_04435 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_04450 PF01063 Amino-transferase class IV M1S23_04455 PF02618 YceG-like family M1S23_04460 PF02223 Thymidylate kinase M1S23_04470 PF00890 FAD binding domain M1S23_04470 PF02910 Fumarate reductase flavoprotein C-term M1S23_04475 PF13180 PDZ domain M1S23_04485 PF00679 Elongation factor G C-terminus M1S23_04485 PF00009 Elongation factor Tu GTP binding domain M1S23_04485 PF03144 Elongation factor Tu domain 2 M1S23_04485 PF06421 GTP-binding protein LepA C-terminus M1S23_04490 PF10502 Signal peptidase, peptidase S26 M1S23_04500 PF00035 Double-stranded RNA binding motif M1S23_04500 PF14622 Ribonuclease-III-like M1S23_04505 PF01926 50S ribosome-binding GTPase M1S23_04505 PF07650 KH domain M1S23_04515 PF11967 Recombination protein O N terminal M1S23_04515 PF02565 Recombination protein O C terminal M1S23_04520 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M1S23_04525 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M1S23_04530 PF00106 short chain dehydrogenase M1S23_04560 PF00155 Aminotransferase class I and II M1S23_04570 PF00990 Diguanylate cyclase, GGDEF domain M1S23_04570 PF17151 Periplasmic sensor domain M1S23_04580 PF00271 Helicase conserved C-terminal domain M1S23_04580 PF04851 Type III restriction enzyme, res subunit M1S23_04580 PF02151 UvrB/uvrC motif M1S23_04580 PF12344 Ultra-violet resistance protein B M1S23_04580 PF17757 UvrB interaction domain M1S23_04590 PF00892 EamA-like transporter family M1S23_04595 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S23_04595 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S23_04610 PF01018 GTP1/OBG M1S23_04610 PF01926 50S ribosome-binding GTPase M1S23_04615 PF01472 PUA domain M1S23_04615 PF00696 Amino acid kinase family M1S23_04625 PF07759 Protein of unknown function (DUF1615) M1S23_04630 PF01207 Dihydrouridine synthase (Dus) M1S23_04635 PF03060 Nitronate monooxygenase M1S23_04650 PF02350 UDP-N-acetylglucosamine 2-epimerase M1S23_04680 PF00875 DNA photolyase M1S23_04680 PF03441 FAD binding domain of DNA photolyase M1S23_04685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S23_04690 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_04695 PF00768 D-alanyl-D-alanine carboxypeptidase M1S23_04695 PF07943 Penicillin-binding protein 5, C-terminal domain M1S23_04705 PF03971 Monomeric isocitrate dehydrogenase M1S23_04710 PF00849 RNA pseudouridylate synthase M1S23_04715 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S23_04735 PF06779 Uncharacterised MFS-type transporter YbfB M1S23_04740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_04740 PF03466 LysR substrate binding domain M1S23_04745 PF00375 Sodium:dicarboxylate symporter family M1S23_04750 PF02567 Phenazine biosynthesis-like protein M1S23_04755 PF05193 Peptidase M16 inactive domain M1S23_04755 PF00675 Insulinase (Peptidase family M16) M1S23_04780 PF02581 Thiamine monophosphate synthase M1S23_04785 PF00202 Aminotransferase class-III M1S23_04795 PF00849 RNA pseudouridylate synthase M1S23_04800 PF00271 Helicase conserved C-terminal domain M1S23_04800 PF12137 RNA polymerase recycling family C-terminal M1S23_04800 PF00176 SNF2 family N-terminal domain M1S23_04800 PF18339 RapA N-terminal Tudor like domain 1 M1S23_04800 PF18337 RapA N-terminal Tudor like domain M1S23_04810 PF00440 Bacterial regulatory proteins, tetR family M1S23_04815 PF00970 Oxidoreductase FAD-binding domain M1S23_04815 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S23_04815 PF00175 Oxidoreductase NAD-binding domain M1S23_04820 PF00487 Fatty acid desaturase M1S23_04830 PF17754 MftR C-terminal domain M1S23_04830 PF00440 Bacterial regulatory proteins, tetR family M1S23_04840 PF00202 Aminotransferase class-III M1S23_04845 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S23_04850 PF00171 Aldehyde dehydrogenase family M1S23_04855 PF01037 Lrp/AsnC ligand binding domain M1S23_04860 PF00205 Thiamine pyrophosphate enzyme, central domain M1S23_04860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S23_04860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S23_04865 PF00324 Amino acid permease M1S23_04870 PF12849 PBP superfamily domain M1S23_04875 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_04880 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_04885 PF00005 ABC transporter M1S23_04890 PF01343 Peptidase family S49 M1S23_04890 PF08496 Peptidase family S49 N-terminal M1S23_04905 PF08328 Adenylosuccinate lyase C-terminal M1S23_04905 PF00206 Lyase M1S23_04910 PF04356 Protein of unknown function (DUF489) M1S23_04920 PF13344 Haloacid dehalogenase-like hydrolase M1S23_04920 PF00293 NUDIX domain M1S23_04925 PF00132 Bacterial transferase hexapeptide (six repeats) M1S23_04930 PF00768 D-alanyl-D-alanine carboxypeptidase M1S23_04930 PF07943 Penicillin-binding protein 5, C-terminal domain M1S23_04945 PF01975 Survival protein SurE M1S23_04950 PF01476 LysM domain M1S23_04950 PF01551 Peptidase family M23 M1S23_04955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_04955 PF03466 LysR substrate binding domain M1S23_04960 PF13654 AAA domain M1S23_04960 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S23_04965 PF07690 Major Facilitator Superfamily M1S23_04970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S23_04975 PF13593 SBF-like CPA transporter family (DUF4137) M1S23_04980 PF01197 Ribosomal protein L31 M1S23_04995 PF04055 Radical SAM superfamily M1S23_05000 PF09285 Elongation factor P, C-terminal M1S23_05000 PF08207 Elongation factor P (EF-P) KOW-like domain M1S23_05000 PF01132 Elongation factor P (EF-P) OB domain M1S23_05005 PF13722 5TM C-terminal transporter carbon starvation CstA M1S23_05005 PF02554 Carbon starvation protein CstA M1S23_05010 PF04328 Selenoprotein, putative M1S23_05045 PF13556 PucR C-terminal helix-turn-helix domain M1S23_05045 PF17853 GGDEF-like domain M1S23_05045 PF06018 CodY GAF-like domain M1S23_05060 PF00171 Aldehyde dehydrogenase family M1S23_05065 PF00324 Amino acid permease M1S23_05070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_05070 PF03466 LysR substrate binding domain M1S23_05075 PF02028 BCCT, betaine/carnitine/choline family transporter M1S23_05095 PF00355 Rieske [2Fe-2S] domain M1S23_05095 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S23_05100 PF00171 Aldehyde dehydrogenase family M1S23_05110 PF18113 Rubredoxin binding C-terminal domain M1S23_05110 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_05115 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S23_05115 PF01266 FAD dependent oxidoreductase M1S23_05135 PF00892 EamA-like transporter family M1S23_05145 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M1S23_05150 PF00083 Sugar (and other) transporter M1S23_05155 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S23_05155 PF13378 Enolase C-terminal domain-like M1S23_05160 PF08990 Erythronolide synthase docking M1S23_05160 PF08240 Alcohol dehydrogenase GroES-like domain M1S23_05160 PF09277 Erythronolide synthase, docking M1S23_05160 PF16197 Ketoacyl-synthetase C-terminal extension M1S23_05160 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S23_05160 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S23_05160 PF08659 KR domain M1S23_05160 PF00550 Phosphopantetheine attachment site M1S23_05160 PF00698 Acyl transferase domain M1S23_05160 PF14765 Polyketide synthase dehydratase M1S23_05165 PF00440 Bacterial regulatory proteins, tetR family M1S23_05185 PF02678 Pirin M1S23_05185 PF17954 Quercetinase C-terminal cupin domain M1S23_05195 PF13309 HTH domain M1S23_05195 PF08348 YheO-like PAS domain M1S23_05205 PF00668 Condensation domain M1S23_05205 PF00501 AMP-binding enzyme M1S23_05205 PF00550 Phosphopantetheine attachment site M1S23_05205 PF13193 AMP-binding enzyme C-terminal domain M1S23_05210 PF00975 Thioesterase domain M1S23_05210 PF13193 AMP-binding enzyme C-terminal domain M1S23_05210 PF00501 AMP-binding enzyme M1S23_05210 PF00668 Condensation domain M1S23_05210 PF00550 Phosphopantetheine attachment site M1S23_05215 PF01032 FecCD transport family M1S23_05220 PF01032 FecCD transport family M1S23_05225 PF00005 ABC transporter M1S23_05230 PF01497 Periplasmic binding protein M1S23_05235 PF00593 TonB dependent receptor M1S23_05235 PF07715 TonB-dependent Receptor Plug Domain M1S23_05240 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S23_05245 PF00550 Phosphopantetheine attachment site M1S23_05245 PF00501 AMP-binding enzyme M1S23_05245 PF00668 Condensation domain M1S23_05250 PF00501 AMP-binding enzyme M1S23_05250 PF13193 AMP-binding enzyme C-terminal domain M1S23_05255 PF00857 Isochorismatase family M1S23_05255 PF00550 Phosphopantetheine attachment site M1S23_05260 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S23_05270 PF00005 ABC transporter M1S23_05275 PF00005 ABC transporter M1S23_05280 PF00975 Thioesterase domain M1S23_05290 PF00425 chorismate binding enzyme M1S23_05300 PF01208 Uroporphyrinogen decarboxylase (URO-D) M1S23_05305 PF05675 Protein of unknown function (DUF817) M1S23_05320 PF00144 Beta-lactamase M1S23_05330 PF01227 GTP cyclohydrolase I M1S23_05335 PF01799 [2Fe-2S] binding domain M1S23_05335 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S23_05340 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M1S23_05340 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M1S23_05355 PF00218 Indole-3-glycerol phosphate synthase M1S23_05360 PF00591 Glycosyl transferase family, a/b domain M1S23_05360 PF02885 Glycosyl transferase family, helical bundle domain M1S23_05365 PF07715 TonB-dependent Receptor Plug Domain M1S23_05365 PF00593 TonB dependent receptor M1S23_05370 PF01433 Peptidase family M1 domain M1S23_05370 PF11838 ERAP1-like C-terminal domain M1S23_05375 PF00117 Glutamine amidotransferase class-I M1S23_05385 PF00854 POT family M1S23_05390 PF00120 Glutamine synthetase, catalytic domain M1S23_05390 PF03951 Glutamine synthetase, beta-Grasp domain M1S23_05395 PF04345 Chorismate lyase M1S23_05400 PF01040 UbiA prenyltransferase family M1S23_05435 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M1S23_05435 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M1S23_05440 PF01784 NIF3 (NGG1p interacting factor 3) M1S23_05445 PF13180 PDZ domain M1S23_05450 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S23_05450 PF01743 Poly A polymerase head domain M1S23_05455 PF03949 Malic enzyme, NAD binding domain M1S23_05455 PF00390 Malic enzyme, N-terminal domain M1S23_05455 PF01515 Phosphate acetyl/butaryl transferase M1S23_05460 PF03707 Bacterial signalling protein N terminal repeat M1S23_05460 PF00563 EAL domain M1S23_05460 PF00990 Diguanylate cyclase, GGDEF domain M1S23_05465 PF04452 RNA methyltransferase M1S23_05470 PF02219 Methylenetetrahydrofolate reductase M1S23_05475 PF05221 S-adenosyl-L-homocysteine hydrolase M1S23_05475 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M1S23_05490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_05490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_05490 PF09317 Domain of unknown function (DUF1974) M1S23_05495 PF04055 Radical SAM superfamily M1S23_05500 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_05500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S23_05510 PF07690 Major Facilitator Superfamily M1S23_05520 PF00557 Metallopeptidase family M24 M1S23_05525 PF00318 Ribosomal protein S2 M1S23_05530 PF00889 Elongation factor TS M1S23_05540 PF12833 Helix-turn-helix domain M1S23_05560 PF05036 Sporulation related domain M1S23_05560 PF03330 Lytic transglycolase M1S23_05565 PF13406 Transglycosylase SLT domain M1S23_05570 PF01098 Cell cycle protein M1S23_05580 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M1S23_05580 PF14489 QueF-like protein M1S23_05585 PF01061 ABC-2 type transporter M1S23_05590 PF00005 ABC transporter M1S23_05620 PF00464 Serine hydroxymethyltransferase M1S23_05625 PF02321 Outer membrane efflux protein M1S23_05630 PF00873 AcrB/AcrD/AcrF family M1S23_05635 PF13533 Biotin-lipoyl like M1S23_05640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_05640 PF03466 LysR substrate binding domain M1S23_05645 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S23_05650 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_05655 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_05660 PF00005 ABC transporter M1S23_05665 PF00893 Small Multidrug Resistance protein M1S23_05670 PF00037 4Fe-4S binding domain M1S23_05675 PF16325 Peptidase family U32 C-terminal domain M1S23_05675 PF01136 Peptidase family U32 M1S23_05680 PF00392 Bacterial regulatory proteins, gntR family M1S23_05680 PF00155 Aminotransferase class I and II M1S23_05685 PF02567 Phenazine biosynthesis-like protein M1S23_05690 PF00970 Oxidoreductase FAD-binding domain M1S23_05690 PF00175 Oxidoreductase NAD-binding domain M1S23_05695 PF01980 tRNA-methyltransferase O M1S23_05695 PF18389 TrmO C-terminal domain M1S23_05705 PF00437 Type II/IV secretion system protein M1S23_05705 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S23_05715 PF00072 Response regulator receiver domain M1S23_05715 PF00486 Transcriptional regulatory protein, C terminal M1S23_05720 PF08521 Two-component sensor kinase N-terminal M1S23_05720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_05720 PF00512 His Kinase A (phospho-acceptor) domain M1S23_05730 PF00293 NUDIX domain M1S23_05740 PF14814 Bifunctional transglycosylase second domain M1S23_05740 PF00912 Transglycosylase M1S23_05740 PF00905 Penicillin binding protein transpeptidase domain M1S23_05745 PF01513 ATP-NAD kinase M1S23_05750 PF07023 Protein of unknown function (DUF1315) M1S23_05755 PF02885 Glycosyl transferase family, helical bundle domain M1S23_05755 PF00591 Glycosyl transferase family, a/b domain M1S23_05760 PF00375 Sodium:dicarboxylate symporter family M1S23_05765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_05765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_05765 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_05770 PF00756 Putative esterase M1S23_05775 PF00800 Prephenate dehydratase M1S23_05775 PF01817 Chorismate mutase type II M1S23_05775 PF01842 ACT domain M1S23_05780 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S23_05790 PF07687 Peptidase dimerisation domain M1S23_05790 PF01546 Peptidase family M20/M25/M40 M1S23_05795 PF12706 Beta-lactamase superfamily domain M1S23_05805 PF03883 Peroxide stress protein YaaA M1S23_05815 PF05690 Thiazole biosynthesis protein ThiG M1S23_05825 PF04241 Protein of unknown function (DUF423) M1S23_05830 PF00140 Sigma-70 factor, region 1.2 M1S23_05830 PF04545 Sigma-70, region 4 M1S23_05830 PF04542 Sigma-70 region 2 M1S23_05845 PF00313 'Cold-shock' DNA-binding domain M1S23_05850 PF00271 Helicase conserved C-terminal domain M1S23_05850 PF00270 DEAD/DEAH box helicase M1S23_05860 PF00881 Nitroreductase family M1S23_05865 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M1S23_05865 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M1S23_05885 PF01180 Dihydroorotate dehydrogenase M1S23_05890 PF02674 Colicin V production protein M1S23_05895 PF00156 Phosphoribosyl transferase domain M1S23_05910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S23_05910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S23_05915 PF01435 Peptidase family M48 M1S23_05920 PF09424 Yqey-like protein M1S23_05925 PF01165 Ribosomal protein S21 M1S23_05930 PF00814 Glycoprotease family M1S23_05950 PF00069 Protein kinase domain M1S23_05975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_05975 PF03466 LysR substrate binding domain M1S23_05980 PF00202 Aminotransferase class-III M1S23_05985 PF00171 Aldehyde dehydrogenase family M1S23_05990 PF00324 Amino acid permease M1S23_06020 PF04076 Bacterial OB fold (BOF) protein M1S23_06045 PF00561 alpha/beta hydrolase fold M1S23_06050 PF03616 Sodium/glutamate symporter M1S23_06060 PF00392 Bacterial regulatory proteins, gntR family M1S23_06060 PF07729 FCD domain M1S23_06110 PF00083 Sugar (and other) transporter M1S23_06110 PF08946 Osmosensory transporter coiled coil M1S23_06135 PF00155 Aminotransferase class I and II M1S23_06145 PF13610 DDE domain M1S23_06160 PF00809 Pterin binding enzyme M1S23_06165 PF00893 Small Multidrug Resistance protein M1S23_06175 PF00132 Bacterial transferase hexapeptide (six repeats) M1S23_06190 PF13610 DDE domain M1S23_06195 PF01636 Phosphotransferase enzyme family M1S23_06205 PF13610 DDE domain M1S23_06210 PF07091 Ribosomal RNA methyltransferase (FmrO) M1S23_06225 PF00005 ABC transporter M1S23_06225 PF12848 ABC transporter M1S23_06230 PF01636 Phosphotransferase enzyme family M1S23_06240 PF13005 zinc-finger binding domain of transposase IS66 M1S23_06240 PF03050 Transposase IS66 family M1S23_06240 PF13817 IS66 C-terminal element M1S23_06240 PF13007 Transposase C of IS166 homeodomain M1S23_06265 PF13610 DDE domain M1S23_06270 PF02796 Helix-turn-helix domain of resolvase M1S23_06270 PF00239 Resolvase, N terminal domain M1S23_06280 PF13610 DDE domain M1S23_06290 PF00106 short chain dehydrogenase M1S23_06300 PF17932 Tetracyclin repressor-like, C-terminal domain M1S23_06300 PF00440 Bacterial regulatory proteins, tetR family M1S23_06305 PF02678 Pirin M1S23_06305 PF17954 Quercetinase C-terminal cupin domain M1S23_06315 PF00106 short chain dehydrogenase M1S23_06320 PF00743 Flavin-binding monooxygenase-like M1S23_06330 PF00860 Permease family M1S23_06335 PF00962 Adenosine/AMP deaminase M1S23_06340 PF01292 Prokaryotic cytochrome b561 M1S23_06350 PF01351 Ribonuclease HII M1S23_06355 PF02599 Global regulator protein family M1S23_06360 PF01842 ACT domain M1S23_06360 PF00696 Amino acid kinase family M1S23_06360 PF13840 ACT domain M1S23_06365 PF02272 DHHA1 domain M1S23_06365 PF01411 tRNA synthetases class II (A) M1S23_06365 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S23_06370 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S23_06370 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S23_06375 PF13393 Histidyl-tRNA synthetase M1S23_06380 PF00709 Adenylosuccinate synthetase M1S23_06395 PF00248 Aldo/keto reductase family M1S23_06405 PF00027 Cyclic nucleotide-binding domain M1S23_06405 PF13545 Crp-like helix-turn-helix domain M1S23_06415 PF02566 OsmC-like protein M1S23_06430 PF00004 ATPase family associated with various cellular activities (AAA) M1S23_06430 PF10431 C-terminal, D2-small domain, of ClpB protein M1S23_06430 PF02861 Clp amino terminal domain, pathogenicity island component M1S23_06430 PF17871 AAA lid domain M1S23_06430 PF07724 AAA domain (Cdc48 subfamily) M1S23_06445 PF01170 Putative RNA methylase family UPF0020 M1S23_06445 PF02926 THUMP domain M1S23_06445 PF10672 S-adenosylmethionine-dependent methyltransferase M1S23_06455 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S23_06455 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S23_06460 PF01979 Amidohydrolase family M1S23_06465 PF00691 OmpA family M1S23_06465 PF13488 Glycine zipper M1S23_06475 PF00043 Glutathione S-transferase, C-terminal domain M1S23_06475 PF13417 Glutathione S-transferase, N-terminal domain M1S23_06480 PF02390 Putative methyltransferase M1S23_06490 PF02798 Glutathione S-transferase, N-terminal domain M1S23_06490 PF00043 Glutathione S-transferase, C-terminal domain M1S23_06500 PF13192 Thioredoxin domain M1S23_06500 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_06520 PF00578 AhpC/TSA family M1S23_06520 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S23_06525 PF00270 DEAD/DEAH box helicase M1S23_06525 PF04408 Helicase associated domain (HA2) M1S23_06525 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M1S23_06525 PF11898 Domain of unknown function (DUF3418) M1S23_06525 PF00271 Helicase conserved C-terminal domain M1S23_06530 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M1S23_06530 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M1S23_06540 PF07690 Major Facilitator Superfamily M1S23_06545 PF03594 Benzoate membrane transport protein M1S23_06550 PF00106 short chain dehydrogenase M1S23_06555 PF00175 Oxidoreductase NAD-binding domain M1S23_06555 PF00970 Oxidoreductase FAD-binding domain M1S23_06555 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S23_06560 PF00866 Ring hydroxylating beta subunit M1S23_06565 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S23_06565 PF00355 Rieske [2Fe-2S] domain M1S23_06575 PF03466 LysR substrate binding domain M1S23_06575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_06585 PF00403 Heavy-metal-associated domain M1S23_06590 PF09278 MerR, DNA binding M1S23_06590 PF00376 MerR family regulatory protein M1S23_06625 PF02601 Exonuclease VII, large subunit M1S23_06625 PF13742 OB-fold nucleic acid binding domain M1S23_06655 PF01810 LysE type translocator M1S23_06660 PF00313 'Cold-shock' DNA-binding domain M1S23_06670 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S23_06670 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S23_06695 PF07690 Major Facilitator Superfamily M1S23_06700 PF01638 HxlR-like helix-turn-helix M1S23_06735 PF01406 tRNA synthetases class I (C) catalytic domain M1S23_06735 PF09190 DALR domain M1S23_06740 PF00571 CBS domain M1S23_06740 PF01380 SIS domain M1S23_06755 PF03968 OstA-like protein M1S23_06760 PF12399 Branched-chain amino acid ATP-binding cassette transporter M1S23_06760 PF00005 ABC transporter M1S23_06765 PF02321 Outer membrane efflux protein M1S23_06770 PF00664 ABC transporter transmembrane region M1S23_06770 PF00005 ABC transporter M1S23_06770 PF03412 Peptidase C39 family M1S23_06780 PF01205 Uncharacterized protein family UPF0029 M1S23_06785 PF00132 Bacterial transferase hexapeptide (six repeats) M1S23_06795 PF01596 O-methyltransferase M1S23_06805 PF00037 4Fe-4S binding domain M1S23_06805 PF11953 Domain of unknown function (DUF3470) M1S23_06815 PF01624 MutS domain I M1S23_06815 PF05192 MutS domain III M1S23_06815 PF05188 MutS domain II M1S23_06815 PF00488 MutS domain V M1S23_06815 PF05190 MutS family domain IV M1S23_06820 PF01037 Lrp/AsnC ligand binding domain M1S23_06825 PF00892 EamA-like transporter family M1S23_06830 PF03707 Bacterial signalling protein N terminal repeat M1S23_06830 PF00990 Diguanylate cyclase, GGDEF domain M1S23_06830 PF00563 EAL domain M1S23_06835 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S23_06850 PF07690 Major Facilitator Superfamily M1S23_06870 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S23_06870 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S23_06890 PF13419 Haloacid dehalogenase-like hydrolase M1S23_06900 PF04717 Type VI secretion system, phage-baseplate injector M1S23_06900 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S23_06900 PF13296 Putative type VI secretion system Rhs element Vgr M1S23_06905 PF05593 RHS Repeat M1S23_06905 PF03527 RHS protein M1S23_06920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_06920 PF03466 LysR substrate binding domain M1S23_06925 PF01566 Natural resistance-associated macrophage protein M1S23_06930 PF03746 LamB/YcsF family M1S23_06935 PF07286 Protein of unknown function (DUF1445) M1S23_06945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S23_06945 PF00364 Biotin-requiring enzyme M1S23_06945 PF00289 Biotin carboxylase, N-terminal domain M1S23_06945 PF02785 Biotin carboxylase C-terminal domain M1S23_06950 PF00654 Voltage gated chloride channel M1S23_06970 PF00440 Bacterial regulatory proteins, tetR family M1S23_06980 PF08240 Alcohol dehydrogenase GroES-like domain M1S23_06980 PF13823 Alcohol dehydrogenase GroES-associated M1S23_06980 PF00107 Zinc-binding dehydrogenase M1S23_06995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S23_06995 PF02785 Biotin carboxylase C-terminal domain M1S23_06995 PF00289 Biotin carboxylase, N-terminal domain M1S23_07000 PF02525 Flavodoxin-like fold M1S23_07020 PF01402 Ribbon-helix-helix protein, copG family M1S23_07020 PF08753 NikR C terminal nickel binding domain M1S23_07025 PF01425 Amidase M1S23_07030 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S23_07035 PF00005 ABC transporter M1S23_07065 PF13610 DDE domain M1S23_07080 PF00375 Sodium:dicarboxylate symporter family M1S23_07090 PF00753 Metallo-beta-lactamase superfamily M1S23_07090 PF16123 Hydroxyacylglutathione hydrolase C-terminus M1S23_07095 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_07100 PF00005 ABC transporter M1S23_07100 PF09383 NIL domain M1S23_07105 PF03180 NLPA lipoprotein M1S23_07110 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M1S23_07110 PF02843 Phosphoribosylglycinamide synthetase, C domain M1S23_07110 PF02844 Phosphoribosylglycinamide synthetase, N domain M1S23_07115 PF01808 AICARFT/IMPCHase bienzyme M1S23_07115 PF02142 MGS-like domain M1S23_07120 PF02954 Bacterial regulatory protein, Fis family M1S23_07140 PF01134 Glucose inhibited division protein A M1S23_07140 PF13932 GidA associated domain M1S23_07150 PF14403 Circularly permuted ATP-grasp type 2 M1S23_07160 PF08379 Bacterial transglutaminase-like N-terminal region M1S23_07160 PF01841 Transglutaminase-like superfamily M1S23_07170 PF01168 Alanine racemase, N-terminal domain M1S23_07170 PF00842 Alanine racemase, C-terminal domain M1S23_07175 PF00772 DnaB-like helicase N terminal domain M1S23_07175 PF03796 DnaB-like helicase C terminal domain M1S23_07180 PF01281 Ribosomal protein L9, N-terminal domain M1S23_07180 PF03948 Ribosomal protein L9, C-terminal domain M1S23_07185 PF01084 Ribosomal protein S18 M1S23_07190 PF01250 Ribosomal protein S6 M1S23_07195 PF01040 UbiA prenyltransferase family M1S23_07200 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M1S23_07205 PF00510 Cytochrome c oxidase subunit III M1S23_07210 PF00115 Cytochrome C and Quinol oxidase polypeptide I M1S23_07215 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M1S23_07215 PF06481 COX Aromatic Rich Motif M1S23_07225 PF00391 PEP-utilising enzyme, mobile domain M1S23_07225 PF02896 PEP-utilising enzyme, TIM barrel domain M1S23_07225 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M1S23_07230 PF03618 Kinase/pyrophosphorylase M1S23_07240 PF14883 Hypothetical glycosyl hydrolase family 13 M1S23_07240 PF01522 Polysaccharide deacetylase M1S23_07245 PF00535 Glycosyl transferase family 2 M1S23_07250 PF13994 PgaD-like protein M1S23_07260 PF00296 Luciferase-like monooxygenase M1S23_07275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_07275 PF03466 LysR substrate binding domain M1S23_07285 PF03462 PCRF domain M1S23_07285 PF00472 RF-1 domain M1S23_07290 PF13847 Methyltransferase domain M1S23_07290 PF17827 PrmC N-terminal domain M1S23_07295 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_07300 PF09084 NMT1/THI5 like M1S23_07305 PF12833 Helix-turn-helix domain M1S23_07310 PF00106 short chain dehydrogenase M1S23_07315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_07315 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_07315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_07320 PF13193 AMP-binding enzyme C-terminal domain M1S23_07320 PF00501 AMP-binding enzyme M1S23_07325 PF01613 Flavin reductase like domain M1S23_07330 PF00899 ThiF family M1S23_07335 PF03109 ABC1 family M1S23_07350 PF03814 Potassium-transporting ATPase A subunit M1S23_07360 PF02669 K+-transporting ATPase, c chain M1S23_07365 PF13493 Domain of unknown function (DUF4118) M1S23_07365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_07365 PF00512 His Kinase A (phospho-acceptor) domain M1S23_07365 PF02702 Osmosensitive K+ channel His kinase sensor domain M1S23_07370 PF00072 Response regulator receiver domain M1S23_07370 PF00486 Transcriptional regulatory protein, C terminal M1S23_07375 PF00120 Glutamine synthetase, catalytic domain M1S23_07385 PF03232 Ubiquinone biosynthesis protein COQ7 M1S23_07390 PF07690 Major Facilitator Superfamily M1S23_07395 PF01103 Surface antigen M1S23_07395 PF17243 POTRA domain TamA domain 1 M1S23_07395 PF07244 Surface antigen variable number repeat M1S23_07410 PF00330 Aconitase family (aconitate hydratase) M1S23_07410 PF11791 Aconitate B N-terminal domain M1S23_07410 PF06434 Aconitate hydratase 2 N-terminus M1S23_07420 PF00027 Cyclic nucleotide-binding domain M1S23_07420 PF00520 Ion transport protein M1S23_07425 PF07690 Major Facilitator Superfamily M1S23_07440 PF03466 LysR substrate binding domain M1S23_07440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_07445 PF04284 Protein of unknown function (DUF441) M1S23_07455 PF01479 S4 domain M1S23_07455 PF00849 RNA pseudouridylate synthase M1S23_07470 PF00849 RNA pseudouridylate synthase M1S23_07470 PF01479 S4 domain M1S23_07475 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M1S23_07480 PF01119 DNA mismatch repair protein, C-terminal domain M1S23_07480 PF08676 MutL C terminal dimerisation domain M1S23_07490 PF17209 Hfq protein M1S23_07500 PF00881 Nitroreductase family M1S23_07510 PF00149 Calcineurin-like phosphoesterase M1S23_07515 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S23_07520 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M1S23_07520 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S23_07525 PF02540 NAD synthase M1S23_07525 PF00958 GMP synthase C terminal domain M1S23_07525 PF00117 Glutamine amidotransferase class-I M1S23_07530 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M1S23_07535 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M1S23_07540 PF13520 Amino acid permease M1S23_07545 PF00171 Aldehyde dehydrogenase family M1S23_07560 PF00465 Iron-containing alcohol dehydrogenase M1S23_07565 PF05970 PIF1-like helicase M1S23_07565 PF14493 Helix-turn-helix domain M1S23_07575 PF06445 GyrI-like small molecule binding domain M1S23_07580 PF02110 Hydroxyethylthiazole kinase family M1S23_07595 PF01433 Peptidase family M1 domain M1S23_07595 PF11940 Domain of unknown function (DUF3458) Ig-like fold M1S23_07595 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M1S23_07605 PF00106 short chain dehydrogenase M1S23_07615 PF01817 Chorismate mutase type II M1S23_07620 PF01037 Lrp/AsnC ligand binding domain M1S23_07635 PF00440 Bacterial regulatory proteins, tetR family M1S23_07640 PF07715 TonB-dependent Receptor Plug Domain M1S23_07640 PF00593 TonB dependent receptor M1S23_07645 PF00924 Mechanosensitive ion channel M1S23_07680 PF07715 TonB-dependent Receptor Plug Domain M1S23_07680 PF00593 TonB dependent receptor M1S23_07700 PF00005 ABC transporter M1S23_07700 PF12848 ABC transporter M1S23_07705 PF00582 Universal stress protein family M1S23_07730 PF00689 Cation transporting ATPase, C-terminus M1S23_07730 PF00690 Cation transporter/ATPase, N-terminus M1S23_07735 PF02308 MgtC family M1S23_07740 PF03594 Benzoate membrane transport protein M1S23_07745 PF01037 Lrp/AsnC ligand binding domain M1S23_07750 PF01810 LysE type translocator M1S23_07755 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1S23_07760 PF03466 LysR substrate binding domain M1S23_07760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_07770 PF00108 Thiolase, N-terminal domain M1S23_07770 PF02803 Thiolase, C-terminal domain M1S23_07780 PF01575 MaoC like domain M1S23_07785 PF00144 Beta-lactamase M1S23_07795 PF07690 Major Facilitator Superfamily M1S23_07800 PF12170 DNA polymerase III tau subunit V interacting with alpha M1S23_07800 PF12169 DNA polymerase III subunits gamma and tau domain III M1S23_07800 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M1S23_07805 PF04185 Phosphoesterase family M1S23_07805 PF05506 Domain of unknown function (DUF756) M1S23_07810 PF03061 Thioesterase superfamily M1S23_07815 PF00465 Iron-containing alcohol dehydrogenase M1S23_07825 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S23_07830 PF01565 FAD binding domain M1S23_07830 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M1S23_07845 PF01645 Conserved region in glutamate synthase M1S23_07955 PF01555 DNA methylase M1S23_08140 PF03869 Arc-like DNA binding domain M1S23_08160 PF01464 Transglycosylase SLT domain M1S23_08160 PF01551 Peptidase family M23 M1S23_08160 PF10145 Phage-related minor tail protein M1S23_08230 PF12832 MFS_1 like family M1S23_08240 PF00289 Biotin carboxylase, N-terminal domain M1S23_08240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S23_08240 PF02785 Biotin carboxylase C-terminal domain M1S23_08245 PF00364 Biotin-requiring enzyme M1S23_08250 PF01220 Dehydroquinase class II M1S23_08255 PF11799 impB/mucB/samB family C-terminal domain M1S23_08255 PF13438 Domain of unknown function (DUF4113) M1S23_08255 PF00817 impB/mucB/samB family M1S23_08265 PF00005 ABC transporter M1S23_08270 PF00486 Transcriptional regulatory protein, C terminal M1S23_08270 PF00072 Response regulator receiver domain M1S23_08280 PF04324 BFD-like [2Fe-2S] binding domain M1S23_08280 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S23_08280 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S23_08280 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_08280 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S23_08280 PF13806 Rieske-like [2Fe-2S] domain M1S23_08285 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_08285 PF04324 BFD-like [2Fe-2S] binding domain M1S23_08285 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S23_08285 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S23_08285 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S23_08290 PF04324 BFD-like [2Fe-2S] binding domain M1S23_08290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S23_08290 PF00384 Molybdopterin oxidoreductase M1S23_08290 PF01568 Molydopterin dinucleotide binding domain M1S23_08295 PF12804 MobA-like NTP transferase domain M1S23_08300 PF01568 Molydopterin dinucleotide binding domain M1S23_08300 PF00384 Molybdopterin oxidoreductase M1S23_08300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S23_08305 PF04055 Radical SAM superfamily M1S23_08305 PF06463 Molybdenum Cofactor Synthesis C M1S23_08315 PF02391 MoaE protein M1S23_08320 PF01967 MoaC family M1S23_08320 PF00994 Probable molybdopterin binding domain M1S23_08325 PF00994 Probable molybdopterin binding domain M1S23_08325 PF03454 MoeA C-terminal region (domain IV) M1S23_08325 PF03453 MoeA N-terminal region (domain I and II) M1S23_08330 PF01638 HxlR-like helix-turn-helix M1S23_08335 PF00155 Aminotransferase class I and II M1S23_08335 PF00392 Bacterial regulatory proteins, gntR family M1S23_08340 PF00892 EamA-like transporter family M1S23_08360 PF02635 DsrE/DsrF-like family M1S23_08365 PF16363 GDP-mannose 4,6 dehydratase M1S23_08370 PF10415 Fumarase C C-terminus M1S23_08370 PF00206 Lyase M1S23_08390 PF01266 FAD dependent oxidoreductase M1S23_08400 PF02542 YgbB family M1S23_08410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S23_08410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S23_08430 PF00158 Sigma-54 interaction domain M1S23_08430 PF02954 Bacterial regulatory protein, Fis family M1S23_08430 PF00072 Response regulator receiver domain M1S23_08435 PF00989 PAS fold M1S23_08435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_08435 PF00512 His Kinase A (phospho-acceptor) domain M1S23_08440 PF00919 Uncharacterized protein family UPF0004 M1S23_08440 PF18693 TRAM domain M1S23_08440 PF04055 Radical SAM superfamily M1S23_08445 PF00696 Amino acid kinase family M1S23_08450 PF01765 Ribosome recycling factor M1S23_08455 PF01255 Putative undecaprenyl diphosphate synthase M1S23_08465 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M1S23_08465 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M1S23_08465 PF13288 DXP reductoisomerase C-terminal domain M1S23_08470 PF13180 PDZ domain M1S23_08470 PF17820 PDZ domain M1S23_08470 PF02163 Peptidase family M50 M1S23_08475 PF01103 Surface antigen M1S23_08475 PF07244 Surface antigen variable number repeat M1S23_08485 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M1S23_08485 PF00132 Bacterial transferase hexapeptide (six repeats) M1S23_08490 PF07977 FabA-like domain M1S23_08495 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M1S23_08495 PF00132 Bacterial transferase hexapeptide (six repeats) M1S23_08510 PF02631 RecX family M1S23_08515 PF00154 recA bacterial DNA recombination protein M1S23_08520 PF01479 S4 domain M1S23_08525 PF13419 Haloacid dehalogenase-like hydrolase M1S23_08550 PF01037 Lrp/AsnC ligand binding domain M1S23_08555 PF00266 Aminotransferase class-V M1S23_08560 PF00324 Amino acid permease M1S23_08575 PF05922 Peptidase inhibitor I9 M1S23_08575 PF00082 Subtilase family M1S23_08580 PF01740 STAS domain M1S23_08580 PF00916 Sulfate permease family M1S23_08585 PF02586 SOS response associated peptidase (SRAP) M1S23_08590 PF07995 Glucose / Sorbosone dehydrogenase M1S23_08600 PF00563 EAL domain M1S23_08600 PF00990 Diguanylate cyclase, GGDEF domain M1S23_08600 PF03707 Bacterial signalling protein N terminal repeat M1S23_08620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M1S23_08620 PF02378 Phosphotransferase system, EIIC M1S23_08625 PF00294 pfkB family carbohydrate kinase M1S23_08630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M1S23_08630 PF00381 PTS HPr component phosphorylation site M1S23_08630 PF02896 PEP-utilising enzyme, TIM barrel domain M1S23_08630 PF00391 PEP-utilising enzyme, mobile domain M1S23_08630 PF05524 PEP-utilising enzyme, N-terminal M1S23_08655 PF05525 Branched-chain amino acid transport protein M1S23_08660 PF00557 Metallopeptidase family M24 M1S23_08665 PF03466 LysR substrate binding domain M1S23_08665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_08675 PF00462 Glutaredoxin M1S23_08680 PF00202 Aminotransferase class-III M1S23_08685 PF00571 CBS domain M1S23_08685 PF00478 IMP dehydrogenase / GMP reductase domain M1S23_08710 PF00448 SRP54-type protein, GTPase domain M1S23_08710 PF02881 SRP54-type protein, helical bundle domain M1S23_08720 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M1S23_08735 PF08173 Membrane bound YbgT-like protein M1S23_08740 PF02322 Cytochrome bd terminal oxidase subunit II M1S23_08745 PF01654 Cytochrome bd terminal oxidase subunit I M1S23_08755 PF07290 Protein of unknown function (DUF1449) M1S23_08765 PF00294 pfkB family carbohydrate kinase M1S23_08770 PF07715 TonB-dependent Receptor Plug Domain M1S23_08770 PF00593 TonB dependent receptor M1S23_08775 PF08367 Peptidase M16C associated M1S23_08775 PF00675 Insulinase (Peptidase family M16) M1S23_08775 PF05193 Peptidase M16 inactive domain M1S23_08780 PF02253 Phospholipase A1 M1S23_08785 PF02386 Cation transport protein M1S23_08790 PF02080 TrkA-C domain M1S23_08790 PF02254 TrkA-N domain M1S23_08795 PF00291 Pyridoxal-phosphate dependent enzyme M1S23_08795 PF00585 C-terminal regulatory domain of Threonine dehydratase M1S23_08800 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M1S23_08815 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S23_08815 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S23_08825 PF02617 ATP-dependent Clp protease adaptor protein ClpS M1S23_08830 PF00004 ATPase family associated with various cellular activities (AAA) M1S23_08830 PF07724 AAA domain (Cdc48 subfamily) M1S23_08830 PF17871 AAA lid domain M1S23_08830 PF02861 Clp amino terminal domain, pathogenicity island component M1S23_08830 PF10431 C-terminal, D2-small domain, of ClpB protein M1S23_08835 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M1S23_08840 PF00793 DAHP synthetase I family M1S23_08855 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_08855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S23_08885 PF06418 CTP synthase N-terminus M1S23_08885 PF00117 Glutamine amidotransferase class-I M1S23_08890 PF00793 DAHP synthetase I family M1S23_08895 PF00113 Enolase, C-terminal TIM barrel domain M1S23_08895 PF03952 Enolase, N-terminal domain M1S23_08900 PF04239 Protein of unknown function (DUF421) M1S23_08905 PF04977 Septum formation initiator M1S23_08910 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M1S23_08915 PF01144 Coenzyme A transferase M1S23_08920 PF01144 Coenzyme A transferase M1S23_08925 PF02803 Thiolase, C-terminal domain M1S23_08925 PF00108 Thiolase, N-terminal domain M1S23_08930 PF10397 Adenylosuccinate lyase C-terminus M1S23_08930 PF00206 Lyase M1S23_08935 PF00561 alpha/beta hydrolase fold M1S23_08940 PF07690 Major Facilitator Superfamily M1S23_08945 PF02627 Carboxymuconolactone decarboxylase family M1S23_08950 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M1S23_08950 PF00775 Dioxygenase M1S23_08955 PF00775 Dioxygenase M1S23_08960 PF01487 Type I 3-dehydroquinase M1S23_08965 PF05048 Periplasmic copper-binding protein (NosD) M1S23_08970 PF04966 Carbohydrate-selective porin, OprB family M1S23_08975 PF01011 PQQ enzyme repeat M1S23_08975 PF13360 PQQ-like domain M1S23_08985 PF04143 Sulphur transport M1S23_08995 PF00753 Metallo-beta-lactamase superfamily M1S23_09000 PF09339 IclR helix-turn-helix domain M1S23_09000 PF01614 Bacterial transcriptional regulator M1S23_09005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_09005 PF03466 LysR substrate binding domain M1S23_09010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_09010 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_09010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_09025 PF00106 short chain dehydrogenase M1S23_09035 PF07690 Major Facilitator Superfamily M1S23_09045 PF01425 Amidase M1S23_09050 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S23_09065 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S23_09065 PF00355 Rieske [2Fe-2S] domain M1S23_09080 PF00175 Oxidoreductase NAD-binding domain M1S23_09080 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S23_09085 PF01613 Flavin reductase like domain M1S23_09090 PF12833 Helix-turn-helix domain M1S23_09090 PF02311 AraC-like ligand binding domain M1S23_09095 PF01179 Copper amine oxidase, enzyme domain M1S23_09095 PF02728 Copper amine oxidase, N3 domain M1S23_09095 PF07833 Copper amine oxidase N-terminal domain M1S23_09095 PF02727 Copper amine oxidase, N2 domain M1S23_09105 PF00171 Aldehyde dehydrogenase family M1S23_09110 PF01804 Penicillin amidase M1S23_09115 PF12146 Serine aminopeptidase, S33 M1S23_09120 PF02803 Thiolase, C-terminal domain M1S23_09120 PF00108 Thiolase, N-terminal domain M1S23_09140 PF02426 Muconolactone delta-isomerase M1S23_09145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S23_09145 PF13378 Enolase C-terminal domain-like M1S23_09150 PF03466 LysR substrate binding domain M1S23_09150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_09160 PF00392 Bacterial regulatory proteins, gntR family M1S23_09160 PF07729 FCD domain M1S23_09165 PF00920 Dehydratase family M1S23_09170 PF07690 Major Facilitator Superfamily M1S23_09200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_09200 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_09200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_09210 PF00158 Sigma-54 interaction domain M1S23_09210 PF06506 Propionate catabolism activator M1S23_09210 PF02954 Bacterial regulatory protein, Fis family M1S23_09220 PF04341 Protein of unknown function, DUF485 M1S23_09235 PF00474 Sodium:solute symporter family M1S23_09240 PF08240 Alcohol dehydrogenase GroES-like domain M1S23_09240 PF00107 Zinc-binding dehydrogenase M1S23_09245 PF00171 Aldehyde dehydrogenase family M1S23_09255 PF00561 alpha/beta hydrolase fold M1S23_09260 PF00199 Catalase M1S23_09260 PF06628 Catalase-related immune-responsive M1S23_09275 PF07859 alpha/beta hydrolase fold M1S23_09280 PF01047 MarR family M1S23_09285 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_09285 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S23_09290 PF00106 short chain dehydrogenase M1S23_09295 PF01872 RibD C-terminal domain M1S23_09300 PF09278 MerR, DNA binding M1S23_09300 PF00376 MerR family regulatory protein M1S23_09310 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_09320 PF12706 Beta-lactamase superfamily domain M1S23_09325 PF08359 YsiA-like protein, C-terminal region M1S23_09325 PF00440 Bacterial regulatory proteins, tetR family M1S23_09335 PF00857 Isochorismatase family M1S23_09340 PF03466 LysR substrate binding domain M1S23_09340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_09345 PF07995 Glucose / Sorbosone dehydrogenase M1S23_09350 PF02254 TrkA-N domain M1S23_09350 PF00999 Sodium/hydrogen exchanger family M1S23_09360 PF01546 Peptidase family M20/M25/M40 M1S23_09360 PF07687 Peptidase dimerisation domain M1S23_09370 PF08479 POTRA domain, ShlB-type M1S23_09370 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M1S23_09370 PF17287 POTRA domain M1S23_09375 PF05860 haemagglutination activity domain M1S23_09375 PF13018 Extended Signal Peptide of Type V secretion system M1S23_09375 PF04829 Pre-toxin domain with VENN motif M1S23_09375 PF13332 Hemagglutinin repeat M1S23_09390 PF07690 Major Facilitator Superfamily M1S23_09395 PF04909 Amidohydrolase M1S23_09405 PF00392 Bacterial regulatory proteins, gntR family M1S23_09405 PF07702 UTRA domain M1S23_09410 PF08450 SMP-30/Gluconolactonase/LRE-like region M1S23_09420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_09420 PF03466 LysR substrate binding domain M1S23_09440 PF07690 Major Facilitator Superfamily M1S23_09445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S23_09445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S23_09445 PF01842 ACT domain M1S23_09450 PF03737 Aldolase/RraA M1S23_09480 PF00529 HlyD membrane-fusion protein of T1SS M1S23_09480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S23_09495 PF00171 Aldehyde dehydrogenase family M1S23_09500 PF00920 Dehydratase family M1S23_09510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_09510 PF03466 LysR substrate binding domain M1S23_09515 PF01370 NAD dependent epimerase/dehydratase family M1S23_09520 PF07690 Major Facilitator Superfamily M1S23_09525 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S23_09525 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S23_09530 PF12833 Helix-turn-helix domain M1S23_09530 PF06719 AraC-type transcriptional regulator N-terminus M1S23_09545 PF00107 Zinc-binding dehydrogenase M1S23_09545 PF08240 Alcohol dehydrogenase GroES-like domain M1S23_09555 PF01032 FecCD transport family M1S23_09560 PF00005 ABC transporter M1S23_09580 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S23_09580 PF14572 Phosphoribosyl synthetase-associated domain M1S23_09585 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S23_09660 PF00196 Bacterial regulatory proteins, luxR family M1S23_09665 PF01425 Amidase M1S23_09670 PF13533 Biotin-lipoyl like M1S23_09675 PF07690 Major Facilitator Superfamily M1S23_09700 PF01975 Survival protein SurE M1S23_09710 PF13291 ACT domain M1S23_09710 PF04607 Region found in RelA / SpoT proteins M1S23_09710 PF02824 TGS domain M1S23_09760 PF12146 Serine aminopeptidase, S33 M1S23_09765 PF02311 AraC-like ligand binding domain M1S23_09765 PF12833 Helix-turn-helix domain M1S23_09775 PF16527 Two-component sensor protein CpxA, periplasmic domain M1S23_09775 PF00672 HAMP domain M1S23_09775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_09775 PF00512 His Kinase A (phospho-acceptor) domain M1S23_09795 PF00529 HlyD membrane-fusion protein of T1SS M1S23_09795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S23_09800 PF00873 AcrB/AcrD/AcrF family M1S23_09805 PF02321 Outer membrane efflux protein M1S23_09810 PF12146 Serine aminopeptidase, S33 M1S23_09815 PF00743 Flavin-binding monooxygenase-like M1S23_09820 PF01593 Flavin containing amine oxidoreductase M1S23_09835 PF01266 FAD dependent oxidoreductase M1S23_09855 PF16970 Type-1 fimbrial protein, A M1S23_09865 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S23_09865 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S23_09870 PF13953 PapC C-terminal domain M1S23_09870 PF13954 PapC N-terminal domain M1S23_09870 PF00577 Outer membrane usher protein M1S23_09875 PF00419 Fimbrial protein M1S23_09885 PF00107 Zinc-binding dehydrogenase M1S23_09885 PF08240 Alcohol dehydrogenase GroES-like domain M1S23_09895 PF00199 Catalase M1S23_09910 PF13091 PLD-like domain M1S23_09925 PF01244 Membrane dipeptidase (Peptidase family M19) M1S23_09930 PF04055 Radical SAM superfamily M1S23_09930 PF13186 Iron-sulfur cluster-binding domain M1S23_09935 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M1S23_09940 PF03070 TENA/THI-4/PQQC family M1S23_09945 PF12706 Beta-lactamase superfamily domain M1S23_09950 PF08042 PqqA family M1S23_09955 PF02503 Polyphosphate kinase middle domain M1S23_09955 PF13089 Polyphosphate kinase N-terminal domain M1S23_09955 PF13090 Polyphosphate kinase C-terminal domain 2 M1S23_09955 PF17941 Polyphosphate kinase C-terminal domain 1 M1S23_09960 PF00149 Calcineurin-like phosphoesterase M1S23_09970 PF00857 Isochorismatase family M1S23_09970 PF00550 Phosphopantetheine attachment site M1S23_09975 PF00106 short chain dehydrogenase M1S23_09980 PF00005 ABC transporter M1S23_09980 PF03459 TOBE domain M1S23_09985 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_09995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_09995 PF03459 TOBE domain M1S23_10000 PF00355 Rieske [2Fe-2S] domain M1S23_10000 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S23_10005 PF00866 Ring hydroxylating beta subunit M1S23_10010 PF00175 Oxidoreductase NAD-binding domain M1S23_10010 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S23_10010 PF00970 Oxidoreductase FAD-binding domain M1S23_10015 PF14525 AraC-binding-like domain M1S23_10015 PF12833 Helix-turn-helix domain M1S23_10025 PF01613 Flavin reductase like domain M1S23_10040 PF01738 Dienelactone hydrolase family M1S23_10045 PF07690 Major Facilitator Superfamily M1S23_10050 PF12833 Helix-turn-helix domain M1S23_10050 PF06719 AraC-type transcriptional regulator N-terminus M1S23_10075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_10075 PF03466 LysR substrate binding domain M1S23_10080 PF01144 Coenzyme A transferase M1S23_10085 PF01144 Coenzyme A transferase M1S23_10090 PF02667 Short chain fatty acid transporter M1S23_10095 PF02803 Thiolase, C-terminal domain M1S23_10095 PF00108 Thiolase, N-terminal domain M1S23_10100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_10100 PF03466 LysR substrate binding domain M1S23_10105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_10105 PF03466 LysR substrate binding domain M1S23_10120 PF10415 Fumarase C C-terminus M1S23_10120 PF00206 Lyase M1S23_10125 PF07715 TonB-dependent Receptor Plug Domain M1S23_10125 PF00593 TonB dependent receptor M1S23_10130 PF00083 Sugar (and other) transporter M1S23_10145 PF00005 ABC transporter M1S23_10150 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_10155 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S23_10170 PF07702 UTRA domain M1S23_10170 PF00392 Bacterial regulatory proteins, gntR family M1S23_10180 PF02525 Flavodoxin-like fold M1S23_10185 PF01638 HxlR-like helix-turn-helix M1S23_10190 PF06445 GyrI-like small molecule binding domain M1S23_10190 PF12833 Helix-turn-helix domain M1S23_10205 PF01925 Sulfite exporter TauE/SafE M1S23_10220 PF04273 Putative phosphatase (DUF442) M1S23_10220 PF00753 Metallo-beta-lactamase superfamily M1S23_10225 PF00158 Sigma-54 interaction domain M1S23_10225 PF02954 Bacterial regulatory protein, Fis family M1S23_10225 PF00072 Response regulator receiver domain M1S23_10230 PF01062 Bestrophin, RFP-TM, chloride channel M1S23_10235 PF08240 Alcohol dehydrogenase GroES-like domain M1S23_10235 PF00107 Zinc-binding dehydrogenase M1S23_10240 PF00106 short chain dehydrogenase M1S23_10245 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_10245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S23_10250 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S23_10250 PF00364 Biotin-requiring enzyme M1S23_10250 PF02817 e3 binding domain M1S23_10255 PF02779 Transketolase, pyrimidine binding domain M1S23_10255 PF02780 Transketolase, C-terminal domain M1S23_10260 PF00676 Dehydrogenase E1 component M1S23_10265 PF04055 Radical SAM superfamily M1S23_10280 PF00990 Diguanylate cyclase, GGDEF domain M1S23_10280 PF08448 PAS fold M1S23_10285 PF01264 Chorismate synthase M1S23_10290 PF05175 Methyltransferase small domain M1S23_10295 PF00291 Pyridoxal-phosphate dependent enzyme M1S23_10305 PF17862 AAA+ lid domain M1S23_10305 PF00004 ATPase family associated with various cellular activities (AAA) M1S23_10305 PF01434 Peptidase family M41 M1S23_10315 PF05166 YcgL domain M1S23_10335 PF01612 3'-5' exonuclease M1S23_10335 PF00570 HRDC domain M1S23_10340 PF02132 RecR protein M1S23_10340 PF13662 Toprim domain M1S23_10345 PF02575 YbaB/EbfC DNA-binding family M1S23_10355 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S23_10360 PF00561 alpha/beta hydrolase fold M1S23_10365 PF08241 Methyltransferase domain M1S23_10395 PF01230 HIT domain M1S23_10430 PF00005 ABC transporter M1S23_10435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S23_10445 PF02684 Lipid-A-disaccharide synthetase M1S23_10450 PF00593 TonB dependent receptor M1S23_10450 PF07715 TonB-dependent Receptor Plug Domain M1S23_10470 PF01925 Sulfite exporter TauE/SafE M1S23_10475 PF00793 DAHP synthetase I family M1S23_10480 PF02654 Cobalamin-5-phosphate synthase M1S23_10495 PF02277 Phosphoribosyltransferase M1S23_10500 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M1S23_10510 PF13419 Haloacid dehalogenase-like hydrolase M1S23_10535 PF07715 TonB-dependent Receptor Plug Domain M1S23_10535 PF00593 TonB dependent receptor M1S23_10550 PF06276 Ferric iron reductase FhuF-like transporter M1S23_10550 PF04183 IucA / IucC family M1S23_10555 PF04183 IucA / IucC family M1S23_10555 PF06276 Ferric iron reductase FhuF-like transporter M1S23_10560 PF07690 Major Facilitator Superfamily M1S23_10565 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S23_10570 PF06276 Ferric iron reductase FhuF-like transporter M1S23_10570 PF04183 IucA / IucC family M1S23_10575 PF04073 Aminoacyl-tRNA editing domain M1S23_10585 PF03109 ABC1 family M1S23_10590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_10590 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_10590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_10595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_10595 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_10595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_10600 PF00487 Fatty acid desaturase M1S23_10605 PF12833 Helix-turn-helix domain M1S23_10605 PF12852 Cupin M1S23_10610 PF00639 PPIC-type PPIASE domain M1S23_10610 PF09312 SurA N-terminal domain M1S23_10615 PF00216 Bacterial DNA-binding protein M1S23_10630 PF02082 Transcriptional regulator M1S23_10635 PF00266 Aminotransferase class-V M1S23_10640 PF01592 NifU-like N terminal domain M1S23_10645 PF01521 Iron-sulphur cluster biosynthesis M1S23_10650 PF00226 DnaJ domain M1S23_10650 PF07743 HSCB C-terminal oligomerisation domain M1S23_10655 PF00012 Hsp70 protein M1S23_10660 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S23_10665 PF00211 Adenylate and Guanylate cyclase catalytic domain M1S23_10675 PF03461 TRCF domain M1S23_10675 PF00271 Helicase conserved C-terminal domain M1S23_10675 PF17757 UvrB interaction domain M1S23_10675 PF02559 CarD-like/TRCF domain M1S23_10675 PF00270 DEAD/DEAH box helicase M1S23_10695 PF03737 Aldolase/RraA M1S23_10700 PF13460 NAD(P)H-binding M1S23_10705 PF01649 Ribosomal protein S20 M1S23_10715 PF00459 Inositol monophosphatase family M1S23_10730 PF00005 ABC transporter M1S23_10730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S23_10735 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_10740 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_10745 PF01432 Peptidase family M3 M1S23_10765 PF07715 TonB-dependent Receptor Plug Domain M1S23_10765 PF00593 TonB dependent receptor M1S23_10775 PF01618 MotA/TolQ/ExbB proton channel family M1S23_10780 PF02472 Biopolymer transport protein ExbD/TolR M1S23_10785 PF02472 Biopolymer transport protein ExbD/TolR M1S23_10795 PF01274 Malate synthase M1S23_10800 PF03969 AFG1-like ATPase M1S23_10810 PF00743 Flavin-binding monooxygenase-like M1S23_10820 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M1S23_10830 PF00216 Bacterial DNA-binding protein M1S23_10835 PF00575 S1 RNA binding domain M1S23_10840 PF02224 Cytidylate kinase M1S23_10850 PF14437 MafB19-like deaminase M1S23_10860 PF03167 Uracil DNA glycosylase superfamily M1S23_10870 PF03934 Type II secretion system (T2SS), protein K M1S23_10875 PF11612 Type II secretion system (T2SS), protein J M1S23_10875 PF07963 Prokaryotic N-terminal methylation motif M1S23_10880 PF07963 Prokaryotic N-terminal methylation motif M1S23_10880 PF02501 Type II secretion system (T2SS), protein I M1S23_10895 PF01026 TatD related DNase M1S23_10905 PF09115 DNA polymerase III, delta subunit, C terminal M1S23_10910 PF02348 Cytidylyltransferase M1S23_10915 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M1S23_10920 PF00005 ABC transporter M1S23_10920 PF00664 ABC transporter transmembrane region M1S23_10930 PF01618 MotA/TolQ/ExbB proton channel family M1S23_10935 PF02195 ParB-like nuclease domain M1S23_10935 PF17762 HTH domain found in ParB protein M1S23_10940 PF13614 AAA domain M1S23_10945 PF02527 rRNA small subunit methyltransferase G M1S23_10950 PF00483 Nucleotidyl transferase M1S23_10955 PF01636 Phosphotransferase enzyme family M1S23_10960 PF04453 LPS transport system D M1S23_10960 PF03968 OstA-like protein M1S23_10965 PF00639 PPIC-type PPIASE domain M1S23_10965 PF09312 SurA N-terminal domain M1S23_10970 PF01116 Fructose-bisphosphate aldolase class-II M1S23_10980 PF00162 Phosphoglycerate kinase M1S23_10990 PF02545 Maf-like protein M1S23_10995 PF08007 Cupin superfamily protein M1S23_11010 PF00375 Sodium:dicarboxylate symporter family M1S23_11015 PF06912 Protein of unknown function (DUF1275) M1S23_11020 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M1S23_11025 PF00005 ABC transporter M1S23_11025 PF00664 ABC transporter transmembrane region M1S23_11035 PF12833 Helix-turn-helix domain M1S23_11035 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S23_11040 PF01597 Glycine cleavage H-protein M1S23_11045 PF02146 Sir2 family M1S23_11050 PF00474 Sodium:solute symporter family M1S23_11055 PF01037 Lrp/AsnC ligand binding domain M1S23_11060 PF14850 DNA-binding domain of Proline dehydrogenase M1S23_11060 PF01619 Proline dehydrogenase M1S23_11060 PF00171 Aldehyde dehydrogenase family M1S23_11060 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M1S23_11065 PF04229 GrpB protein M1S23_11070 PF05958 tRNA (Uracil-5-)-methyltransferase M1S23_11080 PF09992 Phosphodiester glycosidase M1S23_11090 PF04264 YceI-like domain M1S23_11100 PF02779 Transketolase, pyrimidine binding domain M1S23_11100 PF02780 Transketolase, C-terminal domain M1S23_11100 PF00456 Transketolase, thiamine diphosphate binding domain M1S23_11105 PF02773 S-adenosylmethionine synthetase, C-terminal domain M1S23_11105 PF02772 S-adenosylmethionine synthetase, central domain M1S23_11105 PF00438 S-adenosylmethionine synthetase, N-terminal domain M1S23_11125 PF00905 Penicillin binding protein transpeptidase domain M1S23_11140 PF02075 Crossover junction endodeoxyribonuclease RuvC M1S23_11145 PF03853 YjeF-related protein N-terminus M1S23_11145 PF01256 Carbohydrate kinase M1S23_11150 PF08331 Domain of unknown function (DUF1730) M1S23_11155 PF04055 Radical SAM superfamily M1S23_11155 PF06968 Biotin and Thiamin Synthesis associated domain M1S23_11170 PF16970 Type-1 fimbrial protein, A M1S23_11175 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S23_11175 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S23_11180 PF00577 Outer membrane usher protein M1S23_11180 PF13954 PapC N-terminal domain M1S23_11180 PF13953 PapC C-terminal domain M1S23_11200 PF00892 EamA-like transporter family M1S23_11210 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S23_11220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_11220 PF03466 LysR substrate binding domain M1S23_11240 PF00440 Bacterial regulatory proteins, tetR family M1S23_11250 PF01709 Transcriptional regulator M1S23_11255 PF01037 Lrp/AsnC ligand binding domain M1S23_11270 PF00005 ABC transporter M1S23_11275 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_11280 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_11295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_11295 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S23_11305 PF00296 Luciferase-like monooxygenase M1S23_11310 PF03180 NLPA lipoprotein M1S23_11330 PF09383 NIL domain M1S23_11330 PF00005 ABC transporter M1S23_11335 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_11340 PF01926 50S ribosome-binding GTPase M1S23_11340 PF06071 Protein of unknown function (DUF933) M1S23_11365 PF03591 AzlC protein M1S23_11370 PF05437 Branched-chain amino acid transport protein (AzlD) M1S23_11380 PF02222 ATP-grasp domain M1S23_11385 PF01909 Nucleotidyltransferase domain M1S23_11385 PF01966 HD domain M1S23_11385 PF08335 GlnD PII-uridylyltransferase M1S23_11390 PF00155 Aminotransferase class I and II M1S23_11400 PF12833 Helix-turn-helix domain M1S23_11400 PF12852 Cupin M1S23_11405 PF00255 Glutathione peroxidase M1S23_11410 PF01641 SelR domain M1S23_11415 PF00155 Aminotransferase class I and II M1S23_11420 PF00375 Sodium:dicarboxylate symporter family M1S23_11425 PF17763 Glutaminase/Asparaginase C-terminal domain M1S23_11425 PF00710 Asparaginase, N-terminal M1S23_11430 PF02811 PHP domain M1S23_11430 PF14579 Helix-hairpin-helix motif M1S23_11430 PF01336 OB-fold nucleic acid binding domain M1S23_11430 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S23_11430 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S23_11435 PF00588 SpoU rRNA Methylase family M1S23_11440 PF00132 Bacterial transferase hexapeptide (six repeats) M1S23_11455 PF13192 Thioredoxin domain M1S23_11455 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_11470 PF03466 LysR substrate binding domain M1S23_11470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_11475 PF01758 Sodium Bile acid symporter family M1S23_11480 PF01022 Bacterial regulatory protein, arsR family M1S23_11485 PF03960 ArsC family M1S23_11495 PF13382 Adenine deaminase C-terminal domain M1S23_11495 PF01979 Amidohydrolase family M1S23_11505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_11505 PF03466 LysR substrate binding domain M1S23_11515 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S23_11520 PF01177 Asp/Glu/Hydantoin racemase M1S23_11525 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M1S23_11530 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_11535 PF00005 ABC transporter M1S23_11540 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S23_11550 PF00083 Sugar (and other) transporter M1S23_11555 PF00296 Luciferase-like monooxygenase M1S23_11560 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S23_11560 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_11560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_11570 PF01654 Cytochrome bd terminal oxidase subunit I M1S23_11575 PF02322 Cytochrome bd terminal oxidase subunit II M1S23_11585 PF00392 Bacterial regulatory proteins, gntR family M1S23_11585 PF00155 Aminotransferase class I and II M1S23_11590 PF03466 LysR substrate binding domain M1S23_11590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_11605 PF00698 Acyl transferase domain M1S23_11610 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M1S23_11620 PF01039 Carboxyl transferase domain M1S23_11625 PF06857 Malonate decarboxylase delta subunit (MdcD) M1S23_11630 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M1S23_11635 PF16957 Malonate decarboxylase, alpha subunit, transporter M1S23_11640 PF07690 Major Facilitator Superfamily M1S23_11655 PF00392 Bacterial regulatory proteins, gntR family M1S23_11655 PF00155 Aminotransferase class I and II M1S23_11660 PF04172 LrgB-like family M1S23_11665 PF03788 LrgA family M1S23_11670 PF03466 LysR substrate binding domain M1S23_11670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_11675 PF14834 Glutathione S-transferase, C-terminal domain M1S23_11675 PF02798 Glutathione S-transferase, N-terminal domain M1S23_11680 PF02798 Glutathione S-transferase, N-terminal domain M1S23_11685 PF03466 LysR substrate binding domain M1S23_11685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_11695 PF00581 Rhodanese-like domain M1S23_11700 PF00132 Bacterial transferase hexapeptide (six repeats) M1S23_11710 PF00266 Aminotransferase class-V M1S23_11720 PF01810 LysE type translocator M1S23_11725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_11725 PF03466 LysR substrate binding domain M1S23_11735 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S23_11740 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S23_11745 PF00005 ABC transporter M1S23_11750 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_11755 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_11770 PF00072 Response regulator receiver domain M1S23_11775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_11775 PF00512 His Kinase A (phospho-acceptor) domain M1S23_11775 PF09308 LuxQ, periplasmic M1S23_11775 PF00072 Response regulator receiver domain M1S23_11785 PF13404 AsnC-type helix-turn-helix domain M1S23_11785 PF01037 Lrp/AsnC ligand binding domain M1S23_11795 PF00717 Peptidase S24-like M1S23_11820 PF06628 Catalase-related immune-responsive M1S23_11820 PF00199 Catalase M1S23_11820 PF18011 C-terminal domain found in long catalases M1S23_11830 PF18146 Damage-inducible protein CinA KH domain M1S23_11830 PF02464 Competence-damaged protein M1S23_11830 PF00994 Probable molybdopterin binding domain M1S23_11865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_11865 PF03466 LysR substrate binding domain M1S23_11885 PF13193 AMP-binding enzyme C-terminal domain M1S23_11885 PF00501 AMP-binding enzyme M1S23_11890 PF00440 Bacterial regulatory proteins, tetR family M1S23_11895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_11895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_11895 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_11900 PF01039 Carboxyl transferase domain M1S23_11905 PF00378 Enoyl-CoA hydratase/isomerase M1S23_11910 PF02785 Biotin carboxylase C-terminal domain M1S23_11910 PF18140 Propionyl-coenzyme A carboxylase BT domain M1S23_11910 PF00289 Biotin carboxylase, N-terminal domain M1S23_11910 PF00364 Biotin-requiring enzyme M1S23_11910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S23_11915 PF00682 HMGL-like M1S23_11920 PF03466 LysR substrate binding domain M1S23_11920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_11935 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S23_11935 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_11935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_11935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_11945 PF07690 Major Facilitator Superfamily M1S23_11955 PF01144 Coenzyme A transferase M1S23_11960 PF01144 Coenzyme A transferase M1S23_11965 PF07690 Major Facilitator Superfamily M1S23_11970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_11970 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_11970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_11975 PF00378 Enoyl-CoA hydratase/isomerase M1S23_11985 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S23_11985 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S23_11985 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S23_11990 PF02803 Thiolase, C-terminal domain M1S23_11990 PF00108 Thiolase, N-terminal domain M1S23_11995 PF09339 IclR helix-turn-helix domain M1S23_12000 PF07690 Major Facilitator Superfamily M1S23_12005 PF03060 Nitronate monooxygenase M1S23_12010 PF00378 Enoyl-CoA hydratase/isomerase M1S23_12015 PF09339 IclR helix-turn-helix domain M1S23_12020 PF02515 CoA-transferase family III M1S23_12025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_12025 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_12025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_12030 PF07690 Major Facilitator Superfamily M1S23_12035 PF13419 Haloacid dehalogenase-like hydrolase M1S23_12040 PF00266 Aminotransferase class-V M1S23_12045 PF01266 FAD dependent oxidoreductase M1S23_12050 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_12055 PF08402 TOBE domain M1S23_12055 PF00005 ABC transporter M1S23_12065 PF00392 Bacterial regulatory proteins, gntR family M1S23_12065 PF07702 UTRA domain M1S23_12070 PF01494 FAD binding domain M1S23_12075 PF09339 IclR helix-turn-helix domain M1S23_12075 PF01614 Bacterial transcriptional regulator M1S23_12080 PF02525 Flavodoxin-like fold M1S23_12085 PF03466 LysR substrate binding domain M1S23_12085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_12090 PF02627 Carboxymuconolactone decarboxylase family M1S23_12095 PF00171 Aldehyde dehydrogenase family M1S23_12105 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S23_12115 PF00171 Aldehyde dehydrogenase family M1S23_12120 PF00296 Luciferase-like monooxygenase M1S23_12125 PF01613 Flavin reductase like domain M1S23_12130 PF12697 Alpha/beta hydrolase family M1S23_12150 PF01292 Prokaryotic cytochrome b561 M1S23_12155 PF00199 Catalase M1S23_12190 PF03061 Thioesterase superfamily M1S23_12195 PF00132 Bacterial transferase hexapeptide (six repeats) M1S23_12200 PF07848 PaaX-like protein M1S23_12200 PF08223 PaaX-like protein C-terminal domain M1S23_12210 PF13610 DDE domain M1S23_12215 PF00563 EAL domain M1S23_12215 PF11809 Domain of unknown function (DUF3330) M1S23_12225 PF13495 Phage integrase, N-terminal SAM-like domain M1S23_12225 PF00589 Phage integrase family M1S23_12230 PF00583 Acetyltransferase (GNAT) family M1S23_12250 PF00893 Small Multidrug Resistance protein M1S23_12255 PF00809 Pterin binding enzyme M1S23_12275 PF13610 DDE domain M1S23_12280 PF01636 Phosphotransferase enzyme family M1S23_12295 PF13610 DDE domain M1S23_12300 PF00239 Resolvase, N terminal domain M1S23_12300 PF02796 Helix-turn-helix domain of resolvase M1S23_12310 PF13610 DDE domain M1S23_12320 PF00239 Resolvase, N terminal domain M1S23_12320 PF02796 Helix-turn-helix domain of resolvase M1S23_12325 PF13610 DDE domain M1S23_12335 PF04958 Arginine N-succinyltransferase beta subunit M1S23_12340 PF00202 Aminotransferase class-III M1S23_12350 PF00171 Aldehyde dehydrogenase family M1S23_12360 PF07729 FCD domain M1S23_12360 PF00392 Bacterial regulatory proteins, gntR family M1S23_12370 PF00324 Amino acid permease M1S23_12375 PF01266 FAD dependent oxidoreductase M1S23_12380 PF00324 Amino acid permease M1S23_12420 PF05593 RHS Repeat M1S23_12420 PF03527 RHS protein M1S23_12425 PF04717 Type VI secretion system, phage-baseplate injector M1S23_12425 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S23_12425 PF13296 Putative type VI secretion system Rhs element Vgr M1S23_12445 PF03180 NLPA lipoprotein M1S23_12450 PF05987 Bacterial protein of unknown function (DUF898) M1S23_12465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S23_12465 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_12470 PF00764 Arginosuccinate synthase M1S23_12475 PF01590 GAF domain M1S23_12475 PF00360 Phytochrome region M1S23_12475 PF00990 Diguanylate cyclase, GGDEF domain M1S23_12475 PF00563 EAL domain M1S23_12480 PF01979 Amidohydrolase family M1S23_12485 PF00929 Exonuclease M1S23_12495 PF07715 TonB-dependent Receptor Plug Domain M1S23_12495 PF00593 TonB dependent receptor M1S23_12500 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_12500 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S23_12505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S23_12505 PF00005 ABC transporter M1S23_12510 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_12510 PF12911 N-terminal TM domain of oligopeptide transport permease C M1S23_12515 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_12520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1S23_12525 PF01464 Transglycosylase SLT domain M1S23_12525 PF01476 LysM domain M1S23_12525 PF01464 Transglycosylase SLT domain M1S23_12525 PF01476 LysM domain M1S23_12530 PF00929 Exonuclease M1S23_12540 PF09297 NADH pyrophosphatase zinc ribbon domain M1S23_12540 PF00293 NUDIX domain M1S23_12550 PF04972 BON domain M1S23_12555 PF02021 Uncharacterised protein family UPF0102 M1S23_12560 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S23_12570 PF03466 LysR substrate binding domain M1S23_12570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_12575 PF01810 LysE type translocator M1S23_12585 PF13411 MerR HTH family regulatory protein M1S23_12595 PF01494 FAD binding domain M1S23_12600 PF01494 FAD binding domain M1S23_12605 PF05195 Aminopeptidase P, N-terminal domain M1S23_12605 PF00557 Metallopeptidase family M24 M1S23_12690 PF01551 Peptidase family M23 M1S23_12690 PF10145 Phage-related minor tail protein M1S23_12690 PF01464 Transglycosylase SLT domain M1S23_12750 PF04860 Phage portal protein M1S23_12850 PF03796 DnaB-like helicase C terminal domain M1S23_12850 PF00772 DnaB-like helicase N terminal domain M1S23_12865 PF01726 LexA DNA binding domain M1S23_12865 PF00717 Peptidase S24-like M1S23_12920 PF08019 Phosphoethanolamine transferase EptA/EptB M1S23_12920 PF00884 Sulfatase M1S23_12965 PF01476 LysM domain M1S23_12965 PF08525 Opacity-associated protein A N-terminal motif M1S23_12965 PF01551 Peptidase family M23 M1S23_13290 PF01812 5-formyltetrahydrofolate cyclo-ligase family M1S23_13295 PF04355 SmpA / OmlA family M1S23_13295 PF00691 OmpA family M1S23_13300 PF03895 YadA-like membrane anchor domain M1S23_13300 PF05662 Coiled stalk of trimeric autotransporter adhesin M1S23_13300 PF13018 Extended Signal Peptide of Type V secretion system M1S23_13300 PF05658 Head domain of trimeric autotransporter adhesin M1S23_13305 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S23_13305 PF00004 ATPase family associated with various cellular activities (AAA) M1S23_13305 PF02190 ATP-dependent protease La (LON) substrate-binding domain M1S23_13310 PF02590 Predicted SPOUT methyltransferase M1S23_13315 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M1S23_13325 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S23_13325 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S23_13330 PF04060 Putative Fe-S cluster M1S23_13335 PF10576 Iron-sulfur binding domain of endonuclease III M1S23_13335 PF00633 Helix-hairpin-helix motif M1S23_13335 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S23_13345 PF05191 Adenylate kinase, active site lid M1S23_13360 PF00905 Penicillin binding protein transpeptidase domain M1S23_13360 PF03717 Penicillin-binding Protein dimerisation domain M1S23_13375 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S23_13380 PF01730 UreF M1S23_13385 PF02814 UreE urease accessory protein, N-terminal domain M1S23_13385 PF05194 UreE urease accessory protein, C-terminal domain M1S23_13390 PF01979 Amidohydrolase family M1S23_13390 PF00449 Urease alpha-subunit, N-terminal domain M1S23_13395 PF00699 Urease beta subunit M1S23_13400 PF00547 Urease, gamma subunit M1S23_13405 PF01774 UreD urease accessory protein M1S23_13420 PF00463 Isocitrate lyase family M1S23_13425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_13425 PF03466 LysR substrate binding domain M1S23_13430 PF03471 Transporter associated domain M1S23_13430 PF01595 Cyclin M transmembrane N-terminal domain M1S23_13430 PF00571 CBS domain M1S23_13435 PF03600 Citrate transporter M1S23_13450 PF00009 Elongation factor Tu GTP binding domain M1S23_13455 PF01507 Phosphoadenosine phosphosulfate reductase family M1S23_13465 PF14052 Capsule assembly protein Wzi M1S23_13470 PF01336 OB-fold nucleic acid binding domain M1S23_13470 PF00152 tRNA synthetases class II (D, K and N) M1S23_13485 PF00301 Rubredoxin M1S23_13490 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_13490 PF18113 Rubredoxin binding C-terminal domain M1S23_13495 PF00561 alpha/beta hydrolase fold M1S23_13500 PF03466 LysR substrate binding domain M1S23_13500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_13510 PF13090 Polyphosphate kinase C-terminal domain 2 M1S23_13510 PF02503 Polyphosphate kinase middle domain M1S23_13510 PF17941 Polyphosphate kinase C-terminal domain 1 M1S23_13510 PF13089 Polyphosphate kinase N-terminal domain M1S23_13515 PF00912 Transglycosylase M1S23_13520 PF01694 Rhomboid family M1S23_13530 PF00005 ABC transporter M1S23_13535 PF13472 GDSL-like Lipase/Acylhydrolase family M1S23_13540 PF00484 Carbonic anhydrase M1S23_13545 PF00561 alpha/beta hydrolase fold M1S23_13555 PF07715 TonB-dependent Receptor Plug Domain M1S23_13555 PF00593 TonB dependent receptor M1S23_13560 PF01106 NifU-like domain M1S23_13560 PF01521 Iron-sulphur cluster biosynthesis M1S23_13570 PF00884 Sulfatase M1S23_13575 PF03781 Sulfatase-modifying factor enzyme 1 M1S23_13590 PF00291 Pyridoxal-phosphate dependent enzyme M1S23_13595 PF01384 Phosphate transporter family M1S23_13600 PF02607 B12 binding domain M1S23_13600 PF02965 Vitamin B12 dependent methionine synthase, activation domain M1S23_13600 PF00809 Pterin binding enzyme M1S23_13600 PF02574 Homocysteine S-methyltransferase M1S23_13600 PF02310 B12 binding domain M1S23_13610 PF00456 Transketolase, thiamine diphosphate binding domain M1S23_13615 PF07690 Major Facilitator Superfamily M1S23_13625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_13625 PF03466 LysR substrate binding domain M1S23_13635 PF01263 Aldose 1-epimerase M1S23_13640 PF07690 Major Facilitator Superfamily M1S23_13645 PF12833 Helix-turn-helix domain M1S23_13645 PF02311 AraC-like ligand binding domain M1S23_13650 PF04960 Glutaminase M1S23_13655 PF01327 Polypeptide deformylase M1S23_13660 PF07690 Major Facilitator Superfamily M1S23_13670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S23_13670 PF00205 Thiamine pyrophosphate enzyme, central domain M1S23_13670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S23_13675 PF00171 Aldehyde dehydrogenase family M1S23_13680 PF01958 Domain of unknown function DUF108 M1S23_13680 PF03447 Homoserine dehydrogenase, NAD binding domain M1S23_13690 PF12697 Alpha/beta hydrolase family M1S23_13700 PF07690 Major Facilitator Superfamily M1S23_13705 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S23_13705 PF14759 Reductase C-terminal M1S23_13710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S23_13720 PF00355 Rieske [2Fe-2S] domain M1S23_13730 PF00355 Rieske [2Fe-2S] domain M1S23_13735 PF09339 IclR helix-turn-helix domain M1S23_13735 PF01614 Bacterial transcriptional regulator M1S23_13750 PF00378 Enoyl-CoA hydratase/isomerase M1S23_13760 PF00535 Glycosyl transferase family 2 M1S23_13765 PF01522 Polysaccharide deacetylase M1S23_13765 PF14883 Hypothetical glycosyl hydrolase family 13 M1S23_13770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S23_13775 PF07152 YaeQ protein M1S23_13780 PF00375 Sodium:dicarboxylate symporter family M1S23_13785 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S23_13785 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S23_13795 PF03061 Thioesterase superfamily M1S23_13805 PF02028 BCCT, betaine/carnitine/choline family transporter M1S23_13810 PF02028 BCCT, betaine/carnitine/choline family transporter M1S23_13815 PF13977 BetI-type transcriptional repressor, C-terminal M1S23_13815 PF00440 Bacterial regulatory proteins, tetR family M1S23_13820 PF00171 Aldehyde dehydrogenase family M1S23_13825 PF05199 GMC oxidoreductase M1S23_13825 PF00732 GMC oxidoreductase M1S23_13830 PF06039 Malate:quinone oxidoreductase (Mqo) M1S23_13840 PF02574 Homocysteine S-methyltransferase M1S23_13845 PF13520 Amino acid permease M1S23_13870 PF01126 Heme oxygenase M1S23_13880 PF04575 Protein of unknown function (DUF560) M1S23_13900 PF04542 Sigma-70 region 2 M1S23_13900 PF08281 Sigma-70, region 4 M1S23_13910 PF00701 Dihydrodipicolinate synthetase family M1S23_13915 PF00083 Sugar (and other) transporter M1S23_13935 PF01026 TatD related DNase M1S23_13950 PF07693 KAP family P-loop domain M1S23_13970 PF00436 Single-strand binding protein family M1S23_14025 PF00589 Phage integrase family M1S23_14025 PF13356 Arm DNA-binding domain M1S23_14065 PF10544 T5orf172 domain M1S23_14070 PF13614 AAA domain M1S23_14090 PF00905 Penicillin binding protein transpeptidase domain M1S23_14170 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S23_14170 PF02767 DNA polymerase III beta subunit, central domain M1S23_14170 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S23_14210 PF05016 ParE toxin of type II toxin-antitoxin system, parDE M1S23_14360 PF07007 Lysozyme inhibitor LprI M1S23_14405 PF01695 IstB-like ATP binding protein M1S23_14415 PF00145 C-5 cytosine-specific DNA methylase M1S23_14460 PF01381 Helix-turn-helix M1S23_14460 PF00717 Peptidase S24-like M1S23_14495 PF00929 Exonuclease M1S23_14570 PF07690 Major Facilitator Superfamily M1S23_14575 PF13533 Biotin-lipoyl like M1S23_14580 PF03061 Thioesterase superfamily M1S23_14585 PF00490 Delta-aminolevulinic acid dehydratase M1S23_14590 PF01266 FAD dependent oxidoreductase M1S23_14595 PF01370 NAD dependent epimerase/dehydratase family M1S23_14595 PF08338 Domain of unknown function (DUF1731) M1S23_14615 PF00149 Calcineurin-like phosphoesterase M1S23_14615 PF12320 Type 5 capsule protein repressor C-terminal domain M1S23_14625 PF01168 Alanine racemase, N-terminal domain M1S23_14630 PF00437 Type II/IV secretion system protein M1S23_14635 PF00437 Type II/IV secretion system protein M1S23_14640 PF01475 Ferric uptake regulator family M1S23_14645 PF04355 SmpA / OmlA family M1S23_14650 PF03658 RnfH family Ubiquitin M1S23_14660 PF01814 Hemerythrin HHE cation binding domain M1S23_14675 PF00696 Amino acid kinase family M1S23_14680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S23_14680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S23_14680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S23_14680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S23_14685 PF00692 dUTPase M1S23_14690 PF00580 UvrD/REP helicase N-terminal domain M1S23_14690 PF13361 UvrD-like helicase C-terminal domain M1S23_14695 PF00691 OmpA family M1S23_14695 PF13488 Glycine zipper M1S23_14700 PF01553 Acyltransferase M1S23_14710 PF03775 Septum formation inhibitor MinC, C-terminal domain M1S23_14715 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M1S23_14720 PF03776 Septum formation topological specificity factor MinE M1S23_14740 PF01810 LysE type translocator M1S23_14745 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M1S23_14745 PF09397 Ftsk gamma domain M1S23_14745 PF01580 FtsK/SpoIIIE family M1S23_14745 PF17854 FtsK alpha domain M1S23_14755 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M1S23_14760 PF04377 Arginine-tRNA-protein transferase, C terminus M1S23_14760 PF04376 Arginine-tRNA-protein transferase, N terminus M1S23_14765 PF00583 Acetyltransferase (GNAT) family M1S23_14780 PF00009 Elongation factor Tu GTP binding domain M1S23_14780 PF03144 Elongation factor Tu domain 2 M1S23_14780 PF03143 Elongation factor Tu C-terminal domain M1S23_14785 PF03144 Elongation factor Tu domain 2 M1S23_14785 PF00009 Elongation factor Tu GTP binding domain M1S23_14785 PF14492 Elongation Factor G, domain II M1S23_14785 PF00679 Elongation factor G C-terminus M1S23_14785 PF03764 Elongation factor G, domain IV M1S23_14790 PF00177 Ribosomal protein S7p/S5e M1S23_14795 PF00164 Ribosomal protein S12/S23 M1S23_14805 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S23_14805 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S23_14810 PF03653 Uncharacterised protein family (UPF0093) M1S23_14815 PF02678 Pirin M1S23_14815 PF05726 Pirin C-terminal cupin domain M1S23_14825 PF00795 Carbon-nitrogen hydrolase M1S23_14825 PF02540 NAD synthase M1S23_14840 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S23_14840 PF00970 Oxidoreductase FAD-binding domain M1S23_14840 PF00175 Oxidoreductase NAD-binding domain M1S23_14845 PF00171 Aldehyde dehydrogenase family M1S23_14850 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S23_14850 PF00355 Rieske [2Fe-2S] domain M1S23_14855 PF07859 alpha/beta hydrolase fold M1S23_14860 PF02028 BCCT, betaine/carnitine/choline family transporter M1S23_14865 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S23_14870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_14870 PF03466 LysR substrate binding domain M1S23_14890 PF00037 4Fe-4S binding domain M1S23_14895 PF01467 Cytidylyltransferase-like M1S23_14900 PF01668 SmpB protein M1S23_14905 PF03358 NADPH-dependent FMN reductase M1S23_14910 PF02578 Multi-copper polyphenol oxidoreductase laccase M1S23_14915 PF00849 RNA pseudouridylate synthase M1S23_14915 PF01479 S4 domain M1S23_14920 PF13525 Outer membrane lipoprotein M1S23_14925 PF10410 DnaB-helicase binding domain of primase M1S23_14925 PF08278 DNA primase DnaG DnaB-binding M1S23_14925 PF08275 DNA primase catalytic core, N-terminal domain M1S23_14925 PF01807 CHC2 zinc finger M1S23_14930 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M1S23_14930 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M1S23_14930 PF01488 Shikimate / quinate 5-dehydrogenase M1S23_14940 PF03550 Outer membrane lipoprotein LolB M1S23_14945 PF00288 GHMP kinases N terminal domain M1S23_14945 PF08544 GHMP kinases C terminal M1S23_14970 PF14572 Phosphoribosyl synthetase-associated domain M1S23_14970 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S23_14975 PF01386 Ribosomal L25p family M1S23_14980 PF01195 Peptidyl-tRNA hydrolase M1S23_14985 PF02261 Aspartate decarboxylase M1S23_15000 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S23_15010 PF02581 Thiamine monophosphate synthase M1S23_15010 PF08543 Phosphomethylpyrimidine kinase M1S23_15010 PF03070 TENA/THI-4/PQQC family M1S23_15015 PF04972 BON domain M1S23_15015 PF01476 LysM domain M1S23_15020 PF00550 Phosphopantetheine attachment site M1S23_15030 PF00698 Acyl transferase domain M1S23_15035 PF01783 Ribosomal L32p protein family M1S23_15040 PF02620 Large ribosomal RNA subunit accumulation protein YceD M1S23_15045 PF04315 Elongation factor P hydroxylase M1S23_15050 PF01300 Telomere recombination M1S23_15055 PF02616 Segregation and condensation protein ScpA M1S23_15060 PF04079 Segregation and condensation complex subunit ScpB M1S23_15065 PF01479 S4 domain M1S23_15065 PF00849 RNA pseudouridylate synthase M1S23_15080 PF00155 Aminotransferase class I and II M1S23_15085 PF00202 Aminotransferase class-III M1S23_15085 PF06968 Biotin and Thiamin Synthesis associated domain M1S23_15085 PF04055 Radical SAM superfamily M1S23_15090 PF12697 Alpha/beta hydrolase family M1S23_15090 PF08241 Methyltransferase domain M1S23_15095 PF02358 Trehalose-phosphatase M1S23_15100 PF00982 Glycosyltransferase family 20 M1S23_15105 PF07690 Major Facilitator Superfamily M1S23_15110 PF00210 Ferritin-like domain M1S23_15115 PF12826 Helix-hairpin-helix motif M1S23_15115 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M1S23_15115 PF00533 BRCA1 C Terminus (BRCT) domain M1S23_15115 PF01653 NAD-dependent DNA ligase adenylation domain M1S23_15115 PF03120 NAD-dependent DNA ligase OB-fold domain M1S23_15125 PF06470 SMC proteins Flexible Hinge Domain M1S23_15125 PF02463 RecF/RecN/SMC N terminal domain M1S23_15135 PF01925 Sulfite exporter TauE/SafE M1S23_15145 PF03309 Type III pantothenate kinase M1S23_15150 PF02881 SRP54-type protein, helical bundle domain M1S23_15150 PF00448 SRP54-type protein, GTPase domain M1S23_15150 PF02978 Signal peptide binding domain M1S23_15160 PF01207 Dihydrouridine synthase (Dus) M1S23_15190 PF00692 dUTPase M1S23_15205 PF01048 Phosphorylase superfamily M1S23_15210 PF10609 NUBPL iron-transfer P-loop NTPase M1S23_15220 PF09334 tRNA synthetases class I (M) M1S23_15220 PF01588 Putative tRNA binding domain M1S23_15245 PF13533 Biotin-lipoyl like M1S23_15250 PF00291 Pyridoxal-phosphate dependent enzyme M1S23_15265 PF05552 Conserved TM helix M1S23_15280 PF00175 Oxidoreductase NAD-binding domain M1S23_15280 PF00970 Oxidoreductase FAD-binding domain M1S23_15285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_15285 PF03466 LysR substrate binding domain M1S23_15290 PF00313 'Cold-shock' DNA-binding domain M1S23_15300 PF00361 Proton-conducting membrane transporter M1S23_15305 PF00361 Proton-conducting membrane transporter M1S23_15310 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S23_15310 PF00361 Proton-conducting membrane transporter M1S23_15315 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S23_15320 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M1S23_15325 PF12838 4Fe-4S dicluster domain M1S23_15330 PF00146 NADH dehydrogenase M1S23_15335 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M1S23_15335 PF00384 Molybdopterin oxidoreductase M1S23_15335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S23_15340 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M1S23_15340 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M1S23_15340 PF10531 SLBB domain M1S23_15350 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M1S23_15350 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M1S23_15355 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M1S23_15360 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M1S23_15365 PF00990 Diguanylate cyclase, GGDEF domain M1S23_15365 PF17151 Periplasmic sensor domain M1S23_15375 PF00672 HAMP domain M1S23_15375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_15375 PF00512 His Kinase A (phospho-acceptor) domain M1S23_15380 PF00072 Response regulator receiver domain M1S23_15380 PF00486 Transcriptional regulatory protein, C terminal M1S23_15390 PF03477 ATP cone domain M1S23_15390 PF02867 Ribonucleotide reductase, barrel domain M1S23_15390 PF00317 Ribonucleotide reductase, all-alpha domain M1S23_15400 PF00268 Ribonucleotide reductase, small chain M1S23_15410 PF00512 His Kinase A (phospho-acceptor) domain M1S23_15410 PF13756 Stimulus-sensing domain M1S23_15410 PF00672 HAMP domain M1S23_15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_15410 PF13755 Sensor N-terminal transmembrane domain M1S23_15480 PF01011 PQQ enzyme repeat M1S23_15480 PF13360 PQQ-like domain M1S23_15505 PF02567 Phenazine biosynthesis-like protein M1S23_15530 PF01613 Flavin reductase like domain M1S23_15535 PF08267 Cobalamin-independent synthase, N-terminal domain M1S23_15535 PF01717 Cobalamin-independent synthase, Catalytic domain M1S23_15545 PF03466 LysR substrate binding domain M1S23_15545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_15550 PF01810 LysE type translocator M1S23_15560 PF12833 Helix-turn-helix domain M1S23_15560 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S23_15565 PF07687 Peptidase dimerisation domain M1S23_15565 PF01546 Peptidase family M20/M25/M40 M1S23_15575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_15575 PF03466 LysR substrate binding domain M1S23_15580 PF07690 Major Facilitator Superfamily M1S23_15590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_15590 PF03466 LysR substrate binding domain M1S23_15595 PF14537 Cytochrome c3 M1S23_15595 PF00890 FAD binding domain M1S23_15605 PF02515 CoA-transferase family III M1S23_15610 PF07690 Major Facilitator Superfamily M1S23_15615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_15615 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_15615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_15620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_15620 PF03466 LysR substrate binding domain M1S23_15625 PF00107 Zinc-binding dehydrogenase M1S23_15625 PF08240 Alcohol dehydrogenase GroES-like domain M1S23_15630 PF00962 Adenosine/AMP deaminase M1S23_15655 PF02445 Quinolinate synthetase A protein M1S23_15660 PF01960 ArgJ family M1S23_15665 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S23_15665 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S23_15670 PF00893 Small Multidrug Resistance protein M1S23_15680 PF05275 Copper resistance protein B precursor (CopB) M1S23_15685 PF07731 Multicopper oxidase M1S23_15685 PF07732 Multicopper oxidase M1S23_15685 PF00394 Multicopper oxidase M1S23_15700 PF00834 Ribulose-phosphate 3 epimerase family M1S23_15710 PF00756 Putative esterase M1S23_15720 PF04445 Putative SAM-dependent methyltransferase M1S23_15725 PF00814 Glycoprotease family M1S23_15730 PF00132 Bacterial transferase hexapeptide (six repeats) M1S23_15735 PF00293 NUDIX domain M1S23_15775 PF00425 chorismate binding enzyme M1S23_15775 PF04715 Anthranilate synthase component I, N terminal region M1S23_15780 PF00155 Aminotransferase class I and II M1S23_15785 PF00815 Histidinol dehydrogenase M1S23_15790 PF01634 ATP phosphoribosyltransferase M1S23_15800 PF01722 BolA-like protein M1S23_15805 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M1S23_15810 PF00309 Sigma-54 factor, Activator interacting domain (AID) M1S23_15810 PF04963 Sigma-54 factor, core binding domain M1S23_15810 PF04552 Sigma-54, DNA binding domain M1S23_15855 PF00795 Carbon-nitrogen hydrolase M1S23_15865 PF01047 MarR family M1S23_15870 PF02566 OsmC-like protein M1S23_15875 PF00437 Type II/IV secretion system protein M1S23_15895 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S23_15895 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S23_15895 PF01612 3'-5' exonuclease M1S23_15895 PF00476 DNA polymerase family A M1S23_15900 PF02325 YGGT family M1S23_15905 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S23_15905 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S23_15910 PF01171 PP-loop family M1S23_15910 PF09179 TilS substrate binding domain M1S23_15910 PF11734 TilS substrate C-terminal domain M1S23_15915 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M1S23_15920 PF02541 Ppx/GppA phosphatase family M1S23_15925 PF00085 Thioredoxin M1S23_15930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S23_15930 PF07498 Rho termination factor, N-terminal domain M1S23_15930 PF07497 Rho termination factor, RNA-binding domain M1S23_15945 PF00216 Bacterial DNA-binding protein M1S23_15950 PF01588 Putative tRNA binding domain M1S23_15950 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M1S23_15950 PF03483 B3/4 domain M1S23_15950 PF03484 tRNA synthetase B5 domain M1S23_15950 PF03147 Ferredoxin-fold anticodon binding domain M1S23_15955 PF01409 tRNA synthetases class II core domain (F) M1S23_15955 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M1S23_15975 PF00453 Ribosomal protein L20 M1S23_15980 PF01632 Ribosomal protein L35 M1S23_15990 PF07690 Major Facilitator Superfamily M1S23_15995 PF09335 SNARE associated Golgi protein M1S23_16000 PF00043 Glutathione S-transferase, C-terminal domain M1S23_16000 PF02798 Glutathione S-transferase, N-terminal domain M1S23_16005 PF00707 Translation initiation factor IF-3, C-terminal domain M1S23_16005 PF05198 Translation initiation factor IF-3, N-terminal domain M1S23_16010 PF03129 Anticodon binding domain M1S23_16010 PF02824 TGS domain M1S23_16010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S23_16010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S23_16015 PF00501 AMP-binding enzyme M1S23_16015 PF13193 AMP-binding enzyme C-terminal domain M1S23_16020 PF04751 Protein of unknown function (DUF615) M1S23_16025 PF00381 PTS HPr component phosphorylation site M1S23_16030 PF03668 P-loop ATPase protein family M1S23_16035 PF02569 Pantoate-beta-alanine ligase M1S23_16040 PF02548 Ketopantoate hydroxymethyltransferase M1S23_16045 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M1S23_16050 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S23_16050 PF12626 Polymerase A arginine-rich C-terminus M1S23_16050 PF01743 Poly A polymerase head domain M1S23_16060 PF03819 MazG nucleotide pyrophosphohydrolase domain M1S23_16070 PF13291 ACT domain M1S23_16070 PF04607 Region found in RelA / SpoT proteins M1S23_16070 PF02824 TGS domain M1S23_16075 PF05958 tRNA (Uracil-5-)-methyltransferase M1S23_16085 PF00291 Pyridoxal-phosphate dependent enzyme M1S23_16090 PF00672 HAMP domain M1S23_16090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_16090 PF00512 His Kinase A (phospho-acceptor) domain M1S23_16090 PF01627 Hpt domain M1S23_16090 PF00072 Response regulator receiver domain M1S23_16090 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M1S23_16095 PF00378 Enoyl-CoA hydratase/isomerase M1S23_16100 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S23_16100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S23_16105 PF01261 Xylose isomerase-like TIM barrel M1S23_16115 PF00106 short chain dehydrogenase M1S23_16120 PF02233 NAD(P) transhydrogenase beta subunit M1S23_16125 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M1S23_16130 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M1S23_16130 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M1S23_16135 PF00892 EamA-like transporter family M1S23_16145 PF07690 Major Facilitator Superfamily M1S23_16150 PF01207 Dihydrouridine synthase (Dus) M1S23_16160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_16160 PF03466 LysR substrate binding domain M1S23_16170 PF00899 ThiF family M1S23_16180 PF00694 Aconitase C-terminal domain M1S23_16180 PF00330 Aconitase family (aconitate hydratase) M1S23_16185 PF01026 TatD related DNase M1S23_16200 PF00009 Elongation factor Tu GTP binding domain M1S23_16200 PF03144 Elongation factor Tu domain 2 M1S23_16200 PF16658 Class II release factor RF3, C-terminal domain M1S23_16220 PF00563 EAL domain M1S23_16220 PF03707 Bacterial signalling protein N terminal repeat M1S23_16220 PF00990 Diguanylate cyclase, GGDEF domain M1S23_16225 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M1S23_16225 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M1S23_16230 PF10369 Small subunit of acetolactate synthase M1S23_16235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S23_16235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S23_16235 PF00205 Thiamine pyrophosphate enzyme, central domain M1S23_16245 PF09334 tRNA synthetases class I (M) M1S23_16245 PF13603 Leucyl-tRNA synthetase, Domain 2 M1S23_16245 PF00133 tRNA synthetases class I (I, L, M and V) M1S23_16245 PF08264 Anticodon-binding domain of tRNA M1S23_16260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S23_16265 PF12704 MacB-like periplasmic core domain M1S23_16265 PF02687 FtsX-like permease family M1S23_16265 PF00005 ABC transporter M1S23_16270 PF02321 Outer membrane efflux protein M1S23_16285 PF00929 Exonuclease M1S23_16290 PF03193 RsgA GTPase M1S23_16300 PF00462 Glutaredoxin M1S23_16305 PF02556 Preprotein translocase subunit SecB M1S23_16320 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S23_16320 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S23_16335 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S23_16335 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S23_16345 PF04820 Tryptophan halogenase M1S23_16365 PF00221 Aromatic amino acid lyase M1S23_16380 PF00501 AMP-binding enzyme M1S23_16380 PF13193 AMP-binding enzyme C-terminal domain M1S23_16390 PF00550 Phosphopantetheine attachment site M1S23_16395 PF00550 Phosphopantetheine attachment site M1S23_16410 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M1S23_16410 PF01926 50S ribosome-binding GTPase M1S23_16415 PF13360 PQQ-like domain M1S23_16425 PF03129 Anticodon binding domain M1S23_16425 PF13393 Histidyl-tRNA synthetase M1S23_16430 PF04551 GcpE protein M1S23_16435 PF13464 Domain of unknown function (DUF4115) M1S23_16445 PF04055 Radical SAM superfamily M1S23_16450 PF00334 Nucleoside diphosphate kinase M1S23_16455 PF04384 Iron-sulphur cluster assembly M1S23_16460 PF01569 PAP2 superfamily M1S23_16465 PF00534 Glycosyl transferases group 1 M1S23_16465 PF13439 Glycosyltransferase Family 4 M1S23_16470 PF00595 PDZ domain M1S23_16470 PF11818 C-terminal domain of tail specific protease (DUF3340) M1S23_16470 PF03572 Peptidase family S41 M1S23_16470 PF17804 Tail specific protease N-terminal domain M1S23_16475 PF00933 Glycosyl hydrolase family 3 N terminal domain M1S23_16485 PF00561 alpha/beta hydrolase fold M1S23_16490 PF00171 Aldehyde dehydrogenase family M1S23_16495 PF00171 Aldehyde dehydrogenase family M1S23_16500 PF01202 Shikimate kinase M1S23_16505 PF02447 GntP family permease M1S23_16510 PF01081 KDPG and KHG aldolase M1S23_16515 PF00920 Dehydratase family M1S23_16520 PF00871 Acetokinase family M1S23_16525 PF01515 Phosphate acetyl/butaryl transferase M1S23_16525 PF07085 DRTGG domain M1S23_16530 PF05681 Fumarate hydratase (Fumerase) M1S23_16530 PF05683 Fumarase C-terminus M1S23_16545 PF10431 C-terminal, D2-small domain, of ClpB protein M1S23_16545 PF06689 ClpX C4-type zinc finger M1S23_16545 PF07724 AAA domain (Cdc48 subfamily) M1S23_16550 PF00574 Clp protease M1S23_16555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S23_16555 PF05698 Bacterial trigger factor protein (TF) C-terminus M1S23_16555 PF05697 Bacterial trigger factor protein (TF) M1S23_16560 PF07715 TonB-dependent Receptor Plug Domain M1S23_16560 PF00593 TonB dependent receptor M1S23_16565 PF13640 2OG-Fe(II) oxygenase superfamily M1S23_16565 PF18331 PKHD-type hydroxylase C-terminal domain M1S23_16570 PF00682 HMGL-like M1S23_16570 PF08502 LeuA allosteric (dimerisation) domain M1S23_16575 PF00561 alpha/beta hydrolase fold M1S23_16580 PF07021 Methionine biosynthesis protein MetW M1S23_16580 PF00561 alpha/beta hydrolase fold M1S23_16590 PF01725 Ham1 family M1S23_16600 PF02416 mttA/Hcf106 family M1S23_16605 PF02416 mttA/Hcf106 family M1S23_16610 PF00902 Sec-independent protein translocase protein (TatC) M1S23_16630 PF01790 Prolipoprotein diacylglyceryl transferase M1S23_16645 PF00303 Thymidylate synthase M1S23_16650 PF00186 Dihydrofolate reductase M1S23_16660 PF01625 Peptide methionine sulfoxide reductase M1S23_16670 PF01618 MotA/TolQ/ExbB proton channel family M1S23_16680 PF01842 ACT domain M1S23_16680 PF00551 Formyl transferase M1S23_16690 PF00171 Aldehyde dehydrogenase family M1S23_16695 PF00830 Ribosomal L28 family M1S23_16700 PF00471 Ribosomal protein L33 M1S23_16705 PF00999 Sodium/hydrogen exchanger family M1S23_16705 PF02254 TrkA-N domain M1S23_16725 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) M1S23_16730 PF13361 UvrD-like helicase C-terminal domain M1S23_16730 PF00580 UvrD/REP helicase N-terminal domain M1S23_16745 PF08272 Topoisomerase I zinc-ribbon-like M1S23_16745 PF01131 DNA topoisomerase M1S23_16745 PF01751 Toprim domain M1S23_16745 PF01396 Topoisomerase DNA binding C4 zinc finger M1S23_16755 PF01638 HxlR-like helix-turn-helix M1S23_16760 PF08240 Alcohol dehydrogenase GroES-like domain M1S23_16760 PF00107 Zinc-binding dehydrogenase M1S23_16765 PF04102 SlyX M1S23_16770 PF00005 ABC transporter M1S23_16770 PF16326 ABC transporter C-terminal domain M1S23_16770 PF12848 ABC transporter M1S23_16775 PF01810 LysE type translocator M1S23_16780 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S23_16790 PF00375 Sodium:dicarboxylate symporter family M1S23_16800 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S23_16800 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S23_16820 PF01416 tRNA pseudouridine synthase M1S23_16830 PF01176 Translation initiation factor 1A / IF-1 M1S23_16845 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S23_16855 PF00694 Aconitase C-terminal domain M1S23_16860 PF00330 Aconitase family (aconitate hydratase) M1S23_16870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_16870 PF03466 LysR substrate binding domain M1S23_16890 PF00293 NUDIX domain M1S23_16895 PF02896 PEP-utilising enzyme, TIM barrel domain M1S23_16895 PF00391 PEP-utilising enzyme, mobile domain M1S23_16895 PF05524 PEP-utilising enzyme, N-terminal M1S23_16895 PF01590 GAF domain M1S23_16900 PF00141 Peroxidase M1S23_16905 PF12706 Beta-lactamase superfamily domain M1S23_16910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_16910 PF03466 LysR substrate binding domain M1S23_16920 PF02798 Glutathione S-transferase, N-terminal domain M1S23_16925 PF13280 WYL domain M1S23_16925 PF08279 HTH domain M1S23_16930 PF13419 Haloacid dehalogenase-like hydrolase M1S23_16935 PF00849 RNA pseudouridylate synthase M1S23_16935 PF01479 S4 domain M1S23_16940 PF00575 S1 RNA binding domain M1S23_16940 PF12111 Polyribonucleotide phosphorylase C terminal M1S23_16940 PF10150 Ribonuclease E/G family M1S23_16945 PF00501 AMP-binding enzyme M1S23_16945 PF13193 AMP-binding enzyme C-terminal domain M1S23_16960 PF03466 LysR substrate binding domain M1S23_16960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_16965 PF00106 short chain dehydrogenase M1S23_16970 PF04055 Radical SAM superfamily M1S23_16970 PF06969 HemN C-terminal domain M1S23_16980 PF01554 MatE M1S23_16985 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_16985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_16985 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S23_16990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_16990 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S23_16995 PF03109 ABC1 family M1S23_17000 PF01197 Ribosomal protein L31 M1S23_17015 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1S23_17035 PF03884 DNA gyrase inhibitor YacG M1S23_17040 PF00753 Metallo-beta-lactamase superfamily M1S23_17045 PF00762 Ferrochelatase M1S23_17055 PF01177 Asp/Glu/Hydantoin racemase M1S23_17070 PF01206 Sulfurtransferase TusA M1S23_17075 PF00571 CBS domain M1S23_17075 PF03471 Transporter associated domain M1S23_17080 PF00795 Carbon-nitrogen hydrolase M1S23_17085 PF01588 Putative tRNA binding domain M1S23_17095 PF08334 Type II secretion system (T2SS), protein G M1S23_17095 PF07963 Prokaryotic N-terminal methylation motif M1S23_17100 PF00482 Type II secretion system (T2SS), protein F M1S23_17105 PF00270 DEAD/DEAH box helicase M1S23_17105 PF00271 Helicase conserved C-terminal domain M1S23_17105 PF17764 3′ DNA-binding domain (3′BD) M1S23_17105 PF18074 Primosomal protein N C-terminal domain M1S23_17105 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M1S23_17110 PF00999 Sodium/hydrogen exchanger family M1S23_17110 PF02254 TrkA-N domain M1S23_17115 PF01430 Hsp33 protein M1S23_17125 PF01556 DnaJ C terminal domain M1S23_17125 PF00226 DnaJ domain M1S23_17135 PF01544 CorA-like Mg2+ transporter protein M1S23_17140 PF00575 S1 RNA binding domain M1S23_17140 PF00013 KH domain M1S23_17140 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M1S23_17140 PF01138 3' exoribonuclease family, domain 1 M1S23_17140 PF03725 3' exoribonuclease family, domain 2 M1S23_17145 PF00312 Ribosomal protein S15 M1S23_17150 PF00144 Beta-lactamase M1S23_17155 PF13538 UvrD-like helicase C-terminal domain M1S23_17160 PF00580 UvrD/REP helicase N-terminal domain M1S23_17160 PF13361 UvrD-like helicase C-terminal domain M1S23_17160 PF12705 PD-(D/E)XK nuclease superfamily M1S23_17165 PF17946 RecC C-terminal domain M1S23_17175 PF03976 Polyphosphate kinase 2 (PPK2) M1S23_17185 PF01209 ubiE/COQ5 methyltransferase family M1S23_17195 PF03109 ABC1 family M1S23_17200 PF01494 FAD binding domain M1S23_17205 PF01502 Phosphoribosyl-AMP cyclohydrolase M1S23_17220 PF00361 Proton-conducting membrane transporter M1S23_17220 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S23_17220 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M1S23_17220 PF13244 Domain of unknown function (DUF4040) M1S23_17225 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S23_17230 PF00361 Proton-conducting membrane transporter M1S23_17235 PF01899 Na+/H+ ion antiporter subunit M1S23_17240 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M1S23_17245 PF03334 Na+/H+ antiporter subunit M1S23_17250 PF02033 Ribosome-binding factor A M1S23_17255 PF04760 Translation initiation factor IF-2, N-terminal region M1S23_17255 PF00009 Elongation factor Tu GTP binding domain M1S23_17255 PF11987 Translation-initiation factor 2 M1S23_17255 PF08364 Bacterial translation initiation factor IF-2 associated region M1S23_17260 PF13184 NusA-like KH domain M1S23_17260 PF08529 NusA N-terminal domain M1S23_17260 PF00575 S1 RNA binding domain M1S23_17265 PF02576 RimP N-terminal domain M1S23_17265 PF17384 RimP C-terminal SH3 domain M1S23_17285 PF03840 Preprotein translocase SecG subunit M1S23_17290 PF00121 Triosephosphate isomerase M1S23_17295 PF00437 Type II/IV secretion system protein M1S23_17295 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S23_17300 PF00482 Type II secretion system (T2SS), protein F M1S23_17310 PF06750 Bacterial Peptidase A24 N-terminal domain M1S23_17310 PF01478 Type IV leader peptidase family M1S23_17315 PF01121 Dephospho-CoA kinase M1S23_17325 PF00588 SpoU rRNA Methylase family M1S23_17325 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S23_17330 PF06865 Pyrimidine/purine nucleoside phosphorylase M1S23_17340 PF02463 RecF/RecN/SMC N terminal domain M1S23_17345 PF02622 Uncharacterized ACR, COG1678 M1S23_17350 PF03652 Holliday junction resolvase M1S23_17355 PF13533 Biotin-lipoyl like M1S23_17380 PF12833 Helix-turn-helix domain M1S23_17380 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S23_17380 PF02805 Metal binding domain of Ada M1S23_17380 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S23_17385 PF01066 CDP-alcohol phosphatidyltransferase M1S23_17395 PF01541 GIY-YIG catalytic domain M1S23_17395 PF02151 UvrB/uvrC motif M1S23_17395 PF08459 UvrC Helix-hairpin-helix N-terminal M1S23_17415 PF00378 Enoyl-CoA hydratase/isomerase M1S23_17415 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S23_17415 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S23_17420 PF00108 Thiolase, N-terminal domain M1S23_17420 PF02803 Thiolase, C-terminal domain M1S23_17440 PF00376 MerR family regulatory protein M1S23_17440 PF09278 MerR, DNA binding M1S23_17450 PF01323 DSBA-like thioredoxin domain M1S23_17465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_17465 PF00183 Hsp90 protein M1S23_17480 PF03553 Na+/H+ antiporter family M1S23_17480 PF13726 Na+-H+ antiporter family M1S23_17485 PF00561 alpha/beta hydrolase fold M1S23_17510 PF04563 RNA polymerase beta subunit M1S23_17510 PF04561 RNA polymerase Rpb2, domain 2 M1S23_17510 PF04565 RNA polymerase Rpb2, domain 3 M1S23_17510 PF10385 RNA polymerase beta subunit external 1 domain M1S23_17510 PF00562 RNA polymerase Rpb2, domain 6 M1S23_17510 PF04560 RNA polymerase Rpb2, domain 7 M1S23_17515 PF00542 Ribosomal protein L7/L12 C-terminal domain M1S23_17515 PF16320 Ribosomal protein L7/L12 dimerisation domain M1S23_17520 PF00466 Ribosomal protein L10 M1S23_17525 PF00687 Ribosomal protein L1p/L10e family M1S23_17530 PF00298 Ribosomal protein L11, RNA binding domain M1S23_17530 PF03946 Ribosomal protein L11, N-terminal domain M1S23_17535 PF02357 Transcription termination factor nusG M1S23_17535 PF00467 KOW motif M1S23_17540 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M1S23_17550 PF03144 Elongation factor Tu domain 2 M1S23_17550 PF00009 Elongation factor Tu GTP binding domain M1S23_17550 PF03143 Elongation factor Tu C-terminal domain M1S23_17575 PF04715 Anthranilate synthase component I, N terminal region M1S23_17575 PF00425 chorismate binding enzyme M1S23_17580 PF13419 Haloacid dehalogenase-like hydrolase M1S23_17585 PF12401 Protein of unknown function (DUF2662) M1S23_17585 PF00498 FHA domain M1S23_17590 PF00263 Bacterial type II and III secretion system protein M1S23_17590 PF03958 Bacterial type II/III secretion system short domain M1S23_17605 PF00816 H-NS histone family M1S23_17630 PF03900 Porphobilinogen deaminase, C-terminal domain M1S23_17630 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M1S23_17635 PF00072 Response regulator receiver domain M1S23_17635 PF04397 LytTr DNA-binding domain M1S23_17640 PF07694 5TMR of 5TMR-LYT M1S23_17640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_17640 PF06580 Histidine kinase M1S23_17645 PF14698 Argininosuccinate lyase C-terminal M1S23_17645 PF00206 Lyase M1S23_17650 PF04362 Bacterial Fe(2+) trafficking M1S23_17655 PF01895 PhoU domain M1S23_17660 PF02321 Outer membrane efflux protein M1S23_17665 PF00892 EamA-like transporter family M1S23_17680 PF13667 ThiC-associated domain M1S23_17680 PF01964 Radical SAM ThiC family M1S23_17685 PF00293 NUDIX domain M1S23_17690 PF00149 Calcineurin-like phosphoesterase M1S23_17695 PF01258 Prokaryotic dksA/traR C4-type zinc finger M1S23_17700 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S23_17705 PF01098 Cell cycle protein M1S23_17710 PF02875 Mur ligase family, glutamate ligase domain M1S23_17710 PF08245 Mur ligase middle domain M1S23_17720 PF02421 Ferrous iron transport protein B M1S23_17720 PF07664 Ferrous iron transport protein B C terminus M1S23_17720 PF07670 Nucleoside recognition M1S23_17730 PF02899 Phage integrase, N-terminal SAM-like domain M1S23_17730 PF00589 Phage integrase family M1S23_17735 PF10411 Disulfide bond isomerase protein N-terminus M1S23_17735 PF13098 Thioredoxin-like domain M1S23_17740 PF01842 ACT domain M1S23_17740 PF00742 Homoserine dehydrogenase M1S23_17740 PF03447 Homoserine dehydrogenase, NAD binding domain M1S23_17745 PF00291 Pyridoxal-phosphate dependent enzyme M1S23_17750 PF00768 D-alanyl-D-alanine carboxypeptidase M1S23_17755 PF00196 Bacterial regulatory proteins, luxR family M1S23_17755 PF00072 Response regulator receiver domain M1S23_17760 PF00512 His Kinase A (phospho-acceptor) domain M1S23_17760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S23_17765 PF02954 Bacterial regulatory protein, Fis family M1S23_17765 PF00072 Response regulator receiver domain M1S23_17765 PF00158 Sigma-54 interaction domain M1S23_17770 PF00595 PDZ domain M1S23_17770 PF03572 Peptidase family S41 M1S23_17775 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M1S23_17775 PF01676 Metalloenzyme superfamily M1S23_17780 PF03739 Lipopolysaccharide export system permease LptF/LptG M1S23_17790 PF02789 Cytosol aminopeptidase family, N-terminal domain M1S23_17790 PF00883 Cytosol aminopeptidase family, catalytic domain M1S23_17810 PF00677 Lumazine binding domain M1S23_17820 PF01872 RibD C-terminal domain M1S23_17820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S23_17825 PF03477 ATP cone domain M1S23_17830 PF00909 Ammonium Transporter Family M1S23_17835 PF00543 Nitrogen regulatory protein P-II M1S23_17855 PF01636 Phosphotransferase enzyme family M1S23_17860 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M1S23_17880 PF02909 Tetracyclin repressor-like, C-terminal domain M1S23_17880 PF00440 Bacterial regulatory proteins, tetR family M1S23_17885 PF07690 Major Facilitator Superfamily M1S23_17895 PF01740 STAS domain M1S23_17895 PF00916 Sulfate permease family M1S23_17900 PF00582 Universal stress protein family M1S23_17920 PF00665 Integrase core domain M1S23_17935 PF00155 Aminotransferase class I and II M1S23_17935 PF00392 Bacterial regulatory proteins, gntR family M1S23_17945 PF00701 Dihydrodipicolinate synthetase family M1S23_17960 PF03573 outer membrane porin, OprD family M1S23_17965 PF00719 Inorganic pyrophosphatase M1S23_17980 PF13193 AMP-binding enzyme C-terminal domain M1S23_17980 PF00501 AMP-binding enzyme M1S23_17985 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S23_17985 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S23_17990 PF07690 Major Facilitator Superfamily M1S23_17995 PF03458 UPF0126 domain M1S23_18000 PF02810 SEC-C motif M1S23_18005 PF03471 Transporter associated domain M1S23_18005 PF03741 Integral membrane protein TerC family M1S23_18010 PF03641 Possible lysine decarboxylase M1S23_18015 PF07690 Major Facilitator Superfamily M1S23_18025 PF11799 impB/mucB/samB family C-terminal domain M1S23_18025 PF11798 IMS family HHH motif M1S23_18025 PF00817 impB/mucB/samB family M1S23_18045 PF08497 Radical SAM N-terminal M1S23_18045 PF11842 Domain of unknown function (DUF3362) M1S23_18045 PF04055 Radical SAM superfamily M1S23_18065 PF03358 NADPH-dependent FMN reductase M1S23_18075 PF00291 Pyridoxal-phosphate dependent enzyme M1S23_18135 PF01327 Polypeptide deformylase M1S23_18145 PF02481 DNA recombination-mediator protein A M1S23_18145 PF17782 DprA winged helix domain M1S23_18150 PF01300 Telomere recombination M1S23_18155 PF00892 EamA-like transporter family M1S23_18160 PF00440 Bacterial regulatory proteins, tetR family M1S23_18165 PF07690 Major Facilitator Superfamily M1S23_18175 PF00255 Glutathione peroxidase M1S23_18185 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M1S23_18190 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S23_18190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S23_18195 PF00231 ATP synthase M1S23_18200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S23_18200 PF00306 ATP synthase alpha/beta chain, C terminal domain M1S23_18200 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S23_18205 PF00213 ATP synthase delta (OSCP) subunit M1S23_18210 PF00430 ATP synthase B/B' CF(0) M1S23_18215 PF00137 ATP synthase subunit C M1S23_18220 PF00119 ATP synthase A chain M1S23_18240 PF00005 ABC transporter M1S23_18245 PF00950 ABC 3 transport family M1S23_18250 PF01810 LysE type translocator M1S23_18255 PF04261 Dyp-type peroxidase family M1S23_18265 PF00390 Malic enzyme, N-terminal domain M1S23_18265 PF03949 Malic enzyme, NAD binding domain M1S23_18270 PF05746 DALR anticodon binding domain M1S23_18270 PF00750 tRNA synthetases class I (R) M1S23_18270 PF03485 Arginyl tRNA synthetase N terminal domain M1S23_18290 PF02678 Pirin M1S23_18290 PF05726 Pirin C-terminal cupin domain M1S23_18300 PF03551 Transcriptional regulator PadR-like family M1S23_18305 PF13427 Domain of unknown function (DUF4111) M1S23_18305 PF01909 Nucleotidyltransferase domain M1S23_18310 PF00117 Glutamine amidotransferase class-I M1S23_18310 PF00958 GMP synthase C terminal domain M1S23_18310 PF02540 NAD synthase M1S23_18315 PF04286 Protein of unknown function (DUF445) M1S23_18320 PF07681 DoxX M1S23_18325 PF09335 SNARE associated Golgi protein M1S23_18340 PF13614 AAA domain M1S23_18350 PF01722 BolA-like protein M1S23_18365 PF01648 4'-phosphopantetheinyl transferase superfamily M1S23_18370 PF12697 Alpha/beta hydrolase family M1S23_18390 PF00975 Thioesterase domain M1S23_18390 PF14765 Polyketide synthase dehydratase M1S23_18390 PF00550 Phosphopantetheine attachment site M1S23_18390 PF08242 Methyltransferase domain M1S23_18390 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S23_18390 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S23_18390 PF16197 Ketoacyl-synthetase C-terminal extension M1S23_18395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_18395 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_18395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_18400 PF00501 AMP-binding enzyme M1S23_18405 PF00196 Bacterial regulatory proteins, luxR family M1S23_18405 PF03472 Autoinducer binding domain M1S23_18415 PF00765 Autoinducer synthase M1S23_18420 PF00083 Sugar (and other) transporter M1S23_18420 PF07690 Major Facilitator Superfamily M1S23_18425 PF00378 Enoyl-CoA hydratase/isomerase M1S23_18430 PF00378 Enoyl-CoA hydratase/isomerase M1S23_18435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S23_18435 PF02770 Acyl-CoA dehydrogenase, middle domain M1S23_18435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S23_18440 PF00501 AMP-binding enzyme M1S23_18440 PF13193 AMP-binding enzyme C-terminal domain M1S23_18445 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S23_18445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S23_18450 PF00171 Aldehyde dehydrogenase family M1S23_18460 PF00324 Amino acid permease M1S23_18465 PF00324 Amino acid permease M1S23_18470 PF01042 Endoribonuclease L-PSP M1S23_18475 PF01168 Alanine racemase, N-terminal domain M1S23_18475 PF00842 Alanine racemase, C-terminal domain M1S23_18480 PF01266 FAD dependent oxidoreductase M1S23_18485 PF01037 Lrp/AsnC ligand binding domain M1S23_18495 PF07715 TonB-dependent Receptor Plug Domain M1S23_18495 PF00593 TonB dependent receptor M1S23_18510 PF00849 RNA pseudouridylate synthase M1S23_18525 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S23_18525 PF00440 Bacterial regulatory proteins, tetR family M1S23_18535 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S23_18535 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S23_18570 PF00330 Aconitase family (aconitate hydratase) M1S23_18570 PF00694 Aconitase C-terminal domain M1S23_18575 PF00285 Citrate synthase, C-terminal domain M1S23_18585 PF07729 FCD domain M1S23_18585 PF00392 Bacterial regulatory proteins, gntR family M1S23_18595 PF00155 Aminotransferase class I and II M1S23_18600 PF01565 FAD binding domain M1S23_18600 PF09330 D-lactate dehydrogenase, membrane binding M1S23_18605 PF01070 FMN-dependent dehydrogenase M1S23_18610 PF00392 Bacterial regulatory proteins, gntR family M1S23_18610 PF07729 FCD domain M1S23_18615 PF02652 L-lactate permease M1S23_18620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S23_18620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S23_18620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S23_18620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S23_18625 PF16363 GDP-mannose 4,6 dehydratase M1S23_18630 PF00342 Phosphoglucose isomerase M1S23_18635 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S23_18635 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S23_18635 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S23_18640 PF00483 Nucleotidyl transferase M1S23_18645 PF02397 Bacterial sugar transferase M1S23_18650 PF00535 Glycosyl transferase family 2 M1S23_18660 PF05159 Capsule polysaccharide biosynthesis protein M1S23_18670 PF08666 SAF domain M1S23_18670 PF03102 NeuB family M1S23_18685 PF02348 Cytidylyltransferase M1S23_18690 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M1S23_18695 PF02719 Polysaccharide biosynthesis protein M1S23_18700 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S23_18700 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S23_18700 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S23_18705 PF18412 Outer-membrane lipoprotein Wza C-terminal domain M1S23_18705 PF10531 SLBB domain M1S23_18705 PF02563 Polysaccharide biosynthesis/export protein M1S23_18710 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S23_18715 PF02706 Chain length determinant protein M1S23_18715 PF13807 G-rich domain on putative tyrosine kinase M1S23_18715 PF13614 AAA domain M1S23_18720 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S23_18720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S23_18725 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S23_18725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S23_18730 PF03023 Lipid II flippase MurJ M1S23_18735 PF01510 N-acetylmuramoyl-L-alanine amidase M1S23_18740 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M1S23_18740 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M1S23_18750 PF04185 Phosphoesterase family M1S23_18750 PF05506 Domain of unknown function (DUF756) M1S23_18760 PF01138 3' exoribonuclease family, domain 1 M1S23_18760 PF03725 3' exoribonuclease family, domain 2 M1S23_18765 PF00487 Fatty acid desaturase M1S23_18770 PF00175 Oxidoreductase NAD-binding domain M1S23_18775 PF00440 Bacterial regulatory proteins, tetR family M1S23_18780 PF08360 QacR-like protein, C-terminal region M1S23_18780 PF00440 Bacterial regulatory proteins, tetR family M1S23_18785 PF01323 DSBA-like thioredoxin domain M1S23_18795 PF13419 Haloacid dehalogenase-like hydrolase M1S23_18800 PF00106 short chain dehydrogenase M1S23_18815 PF00696 Amino acid kinase family M1S23_18815 PF00583 Acetyltransferase (GNAT) family M1S23_18820 PF09084 NMT1/THI5 like M1S23_18825 PF09084 NMT1/THI5 like M1S23_18830 PF00296 Luciferase-like monooxygenase M1S23_18835 PF00528 Binding-protein-dependent transport system inner membrane component M1S23_18840 PF00005 ABC transporter M1S23_18845 PF08362 YcdC-like protein, C-terminal region M1S23_18845 PF00440 Bacterial regulatory proteins, tetR family M1S23_18850 PF01048 Phosphorylase superfamily M1S23_18860 PF06574 FAD synthetase M1S23_18860 PF01687 Riboflavin kinase M1S23_18865 PF00133 tRNA synthetases class I (I, L, M and V) M1S23_18865 PF06827 Zinc finger found in FPG and IleRS M1S23_18865 PF08264 Anticodon-binding domain of tRNA M1S23_18870 PF01252 Signal peptidase (SPase) II M1S23_18875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S23_18915 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S23_18920 PF07859 alpha/beta hydrolase fold M1S23_18945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S23_18945 PF03466 LysR substrate binding domain M1S23_18950 PF01025 GrpE M1S23_18955 PF00012 Hsp70 protein M1S23_18975 PF13406 Transglycosylase SLT domain M1S23_18980 PF02222 ATP-grasp domain M1S23_18980 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M1S23_18985 PF00731 AIR carboxylase M1S23_18995 PF08245 Mur ligase middle domain M1S23_18995 PF02875 Mur ligase family, glutamate ligase domain M1S23_18995 PF01225 Mur ligase family, catalytic domain M1S23_19005 PF01569 PAP2 superfamily M1S23_19010 PF03741 Integral membrane protein TerC family M1S23_19020 PF03738 Glutathionylspermidine synthase preATP-grasp M1S23_19025 PF00355 Rieske [2Fe-2S] domain M1S23_19030 PF01979 Amidohydrolase family M1S23_19035 PF00156 Phosphoribosyl transferase domain M1S23_19045 PF10411 Disulfide bond isomerase protein N-terminus M1S23_19045 PF13098 Thioredoxin-like domain M1S23_19050 PF16916 Dimerisation domain of Zinc Transporter M1S23_19050 PF01545 Cation efflux family M1S23_19055 PF02583 Metal-sensitive transcriptional repressor M1S23_19060 PF01926 50S ribosome-binding GTPase M1S23_19060 PF12631 MnmE helical domain M1S23_19060 PF10396 GTP-binding protein TrmE N-terminus M1S23_19065 PF02096 60Kd inner membrane protein M1S23_19065 PF14849 YidC periplasmic domain M1S23_19070 PF01809 Putative membrane protein insertion efficiency factor M1S23_19075 PF00825 Ribonuclease P M1S23_19080 PF00468 Ribosomal protein L34 M1S23_19085 PF01051 Initiator Replication protein M1S23_19110 PF07715 TonB-dependent Receptor Plug Domain M1S23_19110 PF00593 TonB dependent receptor M1S23_19130 PF05973 Phage derived protein Gp49-like (DUF891) M1S23_19145 PF03389 MobA/MobL family