locus-tag class description M1S30_00005 PF00308 Bacterial dnaA protein M1S30_00005 PF08299 Bacterial dnaA protein helix-turn-helix M1S30_00005 PF11638 DnaA N-terminal domain M1S30_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S30_00010 PF02767 DNA polymerase III beta subunit, central domain M1S30_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S30_00015 PF02463 RecF/RecN/SMC N terminal domain M1S30_00020 PF00204 DNA gyrase B M1S30_00020 PF00986 DNA gyrase B subunit, carboxyl terminus M1S30_00020 PF18053 DNA gyrase B subunit insert domain M1S30_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_00020 PF01751 Toprim domain M1S30_00030 PF09335 SNARE associated Golgi protein M1S30_00035 PF00005 ABC transporter M1S30_00035 PF12848 ABC transporter M1S30_00055 PF01521 Iron-sulphur cluster biosynthesis M1S30_00060 PF00561 alpha/beta hydrolase fold M1S30_00065 PF03702 Anhydro-N-acetylmuramic acid kinase M1S30_00070 PF00579 tRNA synthetases class I (W and Y) M1S30_00110 PF00209 Sodium:neurotransmitter symporter family M1S30_00120 PF01189 16S rRNA methyltransferase RsmB/F M1S30_00120 PF01029 NusB family M1S30_00130 PF00920 Dehydratase family M1S30_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_00145 PF03466 LysR substrate binding domain M1S30_00150 PF00860 Permease family M1S30_00155 PF00311 Phosphoenolpyruvate carboxylase M1S30_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S30_00160 PF00440 Bacterial regulatory proteins, tetR family M1S30_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S30_00170 PF00873 AcrB/AcrD/AcrF family M1S30_00180 PF00226 DnaJ domain M1S30_00180 PF01556 DnaJ C terminal domain M1S30_00180 PF00684 DnaJ central domain M1S30_00190 PF01113 Dihydrodipicolinate reductase, N-terminus M1S30_00190 PF05173 Dihydrodipicolinate reductase, C-terminus M1S30_00200 PF07690 Major Facilitator Superfamily M1S30_00205 PF00248 Aldo/keto reductase family M1S30_00210 PF03466 LysR substrate binding domain M1S30_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_00225 PF00392 Bacterial regulatory proteins, gntR family M1S30_00225 PF00155 Aminotransferase class I and II M1S30_00230 PF08240 Alcohol dehydrogenase GroES-like domain M1S30_00230 PF00107 Zinc-binding dehydrogenase M1S30_00235 PF03352 Methyladenine glycosylase M1S30_00250 PF14815 NUDIX domain M1S30_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S30_00250 PF00633 Helix-hairpin-helix motif M1S30_00250 PF10576 Iron-sulfur binding domain of endonuclease III M1S30_00265 PF07043 Protein of unknown function (DUF1328) M1S30_00270 PF03692 Putative zinc- or iron-chelating domain M1S30_00275 PF07995 Glucose / Sorbosone dehydrogenase M1S30_00280 PF12002 MgsA AAA+ ATPase C terminal M1S30_00280 PF00004 ATPase family associated with various cellular activities (AAA) M1S30_00280 PF16193 AAA C-terminal domain M1S30_00285 PF01226 Formate/nitrite transporter M1S30_00295 PF01259 SAICAR synthetase M1S30_00305 PF00701 Dihydrodipicolinate synthetase family M1S30_00310 PF00857 Isochorismatase family M1S30_00315 PF01758 Sodium Bile acid symporter family M1S30_00320 PF01554 MatE M1S30_00325 PF04463 Protein of unknown function (DUF523) M1S30_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S30_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S30_00345 PF02798 Glutathione S-transferase, N-terminal domain M1S30_00345 PF14497 Glutathione S-transferase, C-terminal domain M1S30_00355 PF00324 Amino acid permease M1S30_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S30_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S30_00375 PF07702 UTRA domain M1S30_00375 PF00392 Bacterial regulatory proteins, gntR family M1S30_00380 PF05962 HutD M1S30_00385 PF01175 Urocanase Rossmann-like domain M1S30_00385 PF17391 Urocanase N-terminal domain M1S30_00385 PF17392 Urocanase C-terminal domain M1S30_00390 PF00221 Aromatic amino acid lyase M1S30_00395 PF00324 Amino acid permease M1S30_00400 PF01979 Amidohydrolase family M1S30_00405 PF00491 Arginase family M1S30_00420 PF01177 Asp/Glu/Hydantoin racemase M1S30_00425 PF01380 SIS domain M1S30_00430 PF12804 MobA-like NTP transferase domain M1S30_00430 PF14602 Hexapeptide repeat of succinyl-transferase M1S30_00430 PF00132 Bacterial transferase hexapeptide (six repeats) M1S30_00435 PF04608 Phosphatidylglycerophosphatase A M1S30_00440 PF00586 AIR synthase related protein, N-terminal domain M1S30_00440 PF02769 AIR synthase related protein, C-terminal domain M1S30_00445 PF01029 NusB family M1S30_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase M1S30_00455 PF00925 GTP cyclohydrolase II M1S30_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S30_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase M1S30_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S30_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M1S30_00490 PF00581 Rhodanese-like domain M1S30_00495 PF02666 Phosphatidylserine decarboxylase M1S30_00500 PF03069 Acetamidase/Formamidase family M1S30_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_00520 PF00512 His Kinase A (phospho-acceptor) domain M1S30_00520 PF00989 PAS fold M1S30_00520 PF11808 Phosphate regulon sensor protein PhoR M1S30_00525 PF00486 Transcriptional regulatory protein, C terminal M1S30_00525 PF00072 Response regulator receiver domain M1S30_00535 PF00106 short chain dehydrogenase M1S30_00540 PF01554 MatE M1S30_00545 PF00155 Aminotransferase class I and II M1S30_00550 PF04286 Protein of unknown function (DUF445) M1S30_00565 PF04262 Glutamate-cysteine ligase M1S30_00570 PF02600 Disulfide bond formation protein DsbB M1S30_00575 PF13296 Putative type VI secretion system Rhs element Vgr M1S30_00575 PF04717 Type VI secretion system, phage-baseplate injector M1S30_00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S30_00580 PF00877 NlpC/P60 family M1S30_00580 PF01476 LysM domain M1S30_00595 PF05728 Uncharacterised protein family (UPF0227) M1S30_00600 PF00986 DNA gyrase B subunit, carboxyl terminus M1S30_00600 PF00204 DNA gyrase B M1S30_00600 PF01751 Toprim domain M1S30_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_00605 PF00106 short chain dehydrogenase M1S30_00610 PF04115 Ureidoglycolate lyase M1S30_00615 PF03561 Allantoicase repeat M1S30_00620 PF01494 FAD binding domain M1S30_00630 PF00860 Permease family M1S30_00635 PF00576 HIUase/Transthyretin family M1S30_00665 PF02683 Cytochrome C biogenesis protein transmembrane region M1S30_00665 PF11412 Disulphide bond corrector protein DsbC M1S30_00670 PF00990 Diguanylate cyclase, GGDEF domain M1S30_00670 PF07694 5TMR of 5TMR-LYT M1S30_00675 PF07859 alpha/beta hydrolase fold M1S30_00685 PF03960 ArsC family M1S30_00690 PF03372 Endonuclease/Exonuclease/phosphatase family M1S30_00695 PF00156 Phosphoribosyl transferase domain M1S30_00700 PF00593 TonB dependent receptor M1S30_00700 PF07715 TonB-dependent Receptor Plug Domain M1S30_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M1S30_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M1S30_00715 PF03033 Glycosyltransferase family 28 N-terminal domain M1S30_00715 PF04101 Glycosyltransferase family 28 C-terminal domain M1S30_00720 PF08245 Mur ligase middle domain M1S30_00720 PF02875 Mur ligase family, glutamate ligase domain M1S30_00720 PF01225 Mur ligase family, catalytic domain M1S30_00725 PF01820 D-ala D-ala ligase N-terminus M1S30_00725 PF07478 D-ala D-ala ligase C-terminus M1S30_00730 PF08478 POTRA domain, FtsQ-type M1S30_00730 PF03799 Cell division protein FtsQ M1S30_00735 PF02491 SHS2 domain inserted in FTSA M1S30_00740 PF00091 Tubulin/FtsZ family, GTPase domain M1S30_00740 PF12327 FtsZ family, C-terminal domain M1S30_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M1S30_00755 PF01551 Peptidase family M23 M1S30_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain M1S30_00760 PF00456 Transketolase, thiamine diphosphate binding domain M1S30_00765 PF00364 Biotin-requiring enzyme M1S30_00765 PF02817 e3 binding domain M1S30_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S30_00775 PF01169 Uncharacterized protein family UPF0016 M1S30_00780 PF00593 TonB dependent receptor M1S30_00780 PF07715 TonB-dependent Receptor Plug Domain M1S30_00785 PF00258 Flavodoxin M1S30_00785 PF01613 Flavin reductase like domain M1S30_00790 PF03692 Putative zinc- or iron-chelating domain M1S30_00795 PF00478 IMP dehydrogenase / GMP reductase domain M1S30_00795 PF00571 CBS domain M1S30_00800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S30_00800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S30_00800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S30_00800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S30_00805 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M1S30_00805 PF01243 Pyridoxamine 5'-phosphate oxidase M1S30_00810 PF01368 DHH family M1S30_00810 PF02272 DHHA1 domain M1S30_00810 PF17768 RecJ OB domain M1S30_00830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S30_00835 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M1S30_00840 PF04452 RNA methyltransferase M1S30_00845 PF00924 Mechanosensitive ion channel M1S30_00855 PF16177 Acetyl-coenzyme A synthetase N-terminus M1S30_00855 PF00501 AMP-binding enzyme M1S30_00855 PF13193 AMP-binding enzyme C-terminal domain M1S30_00860 PF00857 Isochorismatase family M1S30_00865 PF01037 Lrp/AsnC ligand binding domain M1S30_00870 PF00872 Transposase, Mutator family M1S30_00875 PF00296 Luciferase-like monooxygenase M1S30_00880 PF03358 NADPH-dependent FMN reductase M1S30_00885 PF00072 Response regulator receiver domain M1S30_00885 PF00196 Bacterial regulatory proteins, luxR family M1S30_00895 PF00072 Response regulator receiver domain M1S30_00895 PF01627 Hpt domain M1S30_00895 PF00512 His Kinase A (phospho-acceptor) domain M1S30_00895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_00895 PF00672 HAMP domain M1S30_00900 PF04341 Protein of unknown function, DUF485 M1S30_00905 PF00474 Sodium:solute symporter family M1S30_00915 PF02028 BCCT, betaine/carnitine/choline family transporter M1S30_00925 PF00990 Diguanylate cyclase, GGDEF domain M1S30_00935 PF17760 UvrA interaction domain M1S30_00935 PF17755 UvrA DNA-binding domain M1S30_00935 PF00005 ABC transporter M1S30_00940 PF16925 Tetracyclin repressor-like, C-terminal domain M1S30_00940 PF00440 Bacterial regulatory proteins, tetR family M1S30_00945 PF00107 Zinc-binding dehydrogenase M1S30_00945 PF08240 Alcohol dehydrogenase GroES-like domain M1S30_00955 PF06942 GlpM protein M1S30_00960 PF02581 Thiamine monophosphate synthase M1S30_00960 PF08543 Phosphomethylpyrimidine kinase M1S30_00960 PF03070 TENA/THI-4/PQQC family M1S30_00970 PF07690 Major Facilitator Superfamily M1S30_00975 PF00436 Single-strand binding protein family M1S30_00985 PF03591 AzlC protein M1S30_00995 PF00324 Amino acid permease M1S30_01000 PF00155 Aminotransferase class I and II M1S30_01000 PF00392 Bacterial regulatory proteins, gntR family M1S30_01005 PF00202 Aminotransferase class-III M1S30_01010 PF00171 Aldehyde dehydrogenase family M1S30_01015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_01020 PF00857 Isochorismatase family M1S30_01025 PF05726 Pirin C-terminal cupin domain M1S30_01025 PF02678 Pirin M1S30_01030 PF01593 Flavin containing amine oxidoreductase M1S30_01050 PF07690 Major Facilitator Superfamily M1S30_01055 PF03466 LysR substrate binding domain M1S30_01055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_01075 PF00248 Aldo/keto reductase family M1S30_01080 PF12833 Helix-turn-helix domain M1S30_01080 PF02311 AraC-like ligand binding domain M1S30_01110 PF01638 HxlR-like helix-turn-helix M1S30_01115 PF02525 Flavodoxin-like fold M1S30_01135 PF02705 K+ potassium transporter M1S30_01160 PF00230 Major intrinsic protein M1S30_01175 PF00977 Histidine biosynthesis protein M1S30_01180 PF01636 Phosphotransferase enzyme family M1S30_01195 PF03992 Antibiotic biosynthesis monooxygenase M1S30_01210 PF00977 Histidine biosynthesis protein M1S30_01225 PF00117 Glutamine amidotransferase class-I M1S30_01230 PF00475 Imidazoleglycerol-phosphate dehydratase M1S30_01250 PF00583 Acetyltransferase (GNAT) family M1S30_01255 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M1S30_01255 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M1S30_01265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_01265 PF00672 HAMP domain M1S30_01265 PF00512 His Kinase A (phospho-acceptor) domain M1S30_01270 PF00486 Transcriptional regulatory protein, C terminal M1S30_01270 PF00072 Response regulator receiver domain M1S30_01275 PF09371 Tex-like protein N-terminal domain M1S30_01275 PF16921 Tex protein YqgF-like domain M1S30_01275 PF00575 S1 RNA binding domain M1S30_01275 PF17674 HHH domain M1S30_01280 PF01740 STAS domain M1S30_01280 PF00916 Sulfate permease family M1S30_01285 PF00106 short chain dehydrogenase M1S30_01290 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S30_01295 PF12848 ABC transporter M1S30_01295 PF00005 ABC transporter M1S30_01320 PF04191 Phospholipid methyltransferase M1S30_01340 PF00529 HlyD membrane-fusion protein of T1SS M1S30_01340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S30_01345 PF00873 AcrB/AcrD/AcrF family M1S30_01350 PF01545 Cation efflux family M1S30_01380 PF00324 Amino acid permease M1S30_01395 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S30_01410 PF01795 MraW methylase family M1S30_01420 PF03717 Penicillin-binding Protein dimerisation domain M1S30_01420 PF00905 Penicillin binding protein transpeptidase domain M1S30_01425 PF08245 Mur ligase middle domain M1S30_01425 PF01225 Mur ligase family, catalytic domain M1S30_01425 PF02875 Mur ligase family, glutamate ligase domain M1S30_01430 PF08245 Mur ligase middle domain M1S30_01430 PF02875 Mur ligase family, glutamate ligase domain M1S30_01430 PF01225 Mur ligase family, catalytic domain M1S30_01435 PF00953 Glycosyl transferase family 4 M1S30_01445 PF13847 Methyltransferase domain M1S30_01450 PF00912 Transglycosylase M1S30_01450 PF00905 Penicillin binding protein transpeptidase domain M1S30_01450 PF17092 Penicillin-binding protein OB-like domain M1S30_01455 PF11104 Type IV pilus assembly protein PilM; M1S30_01460 PF05137 Fimbrial assembly protein (PilN) M1S30_01465 PF04350 Pilus assembly protein, PilO M1S30_01475 PF03958 Bacterial type II/III secretion system short domain M1S30_01475 PF00263 Bacterial type II and III secretion system protein M1S30_01475 PF07660 Secretin and TonB N terminus short domain M1S30_01475 PF11741 AMIN domain M1S30_01480 PF01202 Shikimate kinase M1S30_01485 PF01761 3-dehydroquinate synthase M1S30_01495 PF01493 GXGXG motif M1S30_01495 PF01645 Conserved region in glutamate synthase M1S30_01495 PF04898 Glutamate synthase central domain M1S30_01495 PF00310 Glutamine amidotransferases class-II M1S30_01500 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M1S30_01500 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_01510 PF04011 LemA family M1S30_01515 PF04536 TPM domain M1S30_01525 PF00114 Pilin (bacterial filament) M1S30_01525 PF07963 Prokaryotic N-terminal methylation motif M1S30_01535 PF04932 O-Antigen ligase M1S30_01535 PF11846 Virulence factor membrane-bound polymerase, C-terminal M1S30_01535 PF15864 Protein glycosylation ligase M1S30_01545 PF00210 Ferritin-like domain M1S30_01550 PF04324 BFD-like [2Fe-2S] binding domain M1S30_01555 PF01042 Endoribonuclease L-PSP M1S30_01560 PF04607 Region found in RelA / SpoT proteins M1S30_01560 PF13291 ACT domain M1S30_01560 PF02824 TGS domain M1S30_01570 PF01192 RNA polymerase Rpb6 M1S30_01575 PF00625 Guanylate kinase M1S30_01580 PF02401 LytB protein M1S30_01620 PF00886 Ribosomal protein S16 M1S30_01625 PF05239 PRC-barrel domain M1S30_01625 PF01782 RimM N-terminal domain M1S30_01630 PF01746 tRNA (Guanine-1)-methyltransferase M1S30_01635 PF01245 Ribosomal protein L19 M1S30_01640 PF00561 alpha/beta hydrolase fold M1S30_01645 PF03280 Proteobacterial lipase chaperone protein M1S30_01650 PF09157 Pseudouridine synthase II TruB, C-terminal M1S30_01650 PF16198 tRNA pseudouridylate synthase B C-terminal domain M1S30_01650 PF01509 TruB family pseudouridylate synthase (N terminal domain) M1S30_01655 PF01925 Sulfite exporter TauE/SafE M1S30_01665 PF00892 EamA-like transporter family M1S30_01670 PF00892 EamA-like transporter family M1S30_01675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S30_01675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S30_01680 PF02913 FAD linked oxidases, C-terminal domain M1S30_01680 PF01565 FAD binding domain M1S30_01690 PF03992 Antibiotic biosynthesis monooxygenase M1S30_01695 PF02525 Flavodoxin-like fold M1S30_01705 PF07690 Major Facilitator Superfamily M1S30_01710 PF12805 FUSC-like inner membrane protein yccS M1S30_01715 PF00080 Copper/zinc superoxide dismutase (SODC) M1S30_01720 PF01594 AI-2E family transporter M1S30_01755 PF00324 Amino acid permease M1S30_01760 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S30_01760 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S30_01770 PF04958 Arginine N-succinyltransferase beta subunit M1S30_01775 PF00171 Aldehyde dehydrogenase family M1S30_01780 PF04996 Succinylarginine dihydrolase M1S30_01785 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M1S30_01800 PF05922 Peptidase inhibitor I9 M1S30_01800 PF00082 Subtilase family M1S30_01815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_01815 PF03466 LysR substrate binding domain M1S30_01820 PF00892 EamA-like transporter family M1S30_01830 PF02092 Glycyl-tRNA synthetase beta subunit M1S30_01830 PF05746 DALR anticodon binding domain M1S30_01835 PF02091 Glycyl-tRNA synthetase alpha subunit M1S30_01860 PF00571 CBS domain M1S30_01865 PF04024 PspC domain M1S30_01875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_01875 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S30_01875 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_01875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_01885 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M1S30_01885 PF01488 Shikimate / quinate 5-dehydrogenase M1S30_01885 PF08501 Shikimate dehydrogenase substrate binding domain M1S30_01890 PF01218 Coproporphyrinogen III oxidase M1S30_01895 PF00925 GTP cyclohydrolase II M1S30_01900 PF02780 Transketolase, C-terminal domain M1S30_01900 PF02779 Transketolase, pyrimidine binding domain M1S30_01900 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M1S30_01905 PF00459 Inositol monophosphatase family M1S30_01910 PF00271 Helicase conserved C-terminal domain M1S30_01910 PF12343 Cold shock protein DEAD box A M1S30_01910 PF00270 DEAD/DEAH box helicase M1S30_01910 PF03880 DbpA RNA binding domain M1S30_01920 PF00005 ABC transporter M1S30_01925 PF02405 Permease MlaE M1S30_01935 PF05494 MlaC protein M1S30_01945 PF01544 CorA-like Mg2+ transporter protein M1S30_01950 PF03641 Possible lysine decarboxylase M1S30_01955 PF00293 NUDIX domain M1S30_01960 PF00156 Phosphoribosyl transferase domain M1S30_01965 PF17191 RecG wedge domain M1S30_01965 PF00270 DEAD/DEAH box helicase M1S30_01965 PF00271 Helicase conserved C-terminal domain M1S30_01980 PF01553 Acyltransferase M1S30_01990 PF00375 Sodium:dicarboxylate symporter family M1S30_02000 PF01926 50S ribosome-binding GTPase M1S30_02005 PF02082 Transcriptional regulator M1S30_02010 PF00970 Oxidoreductase FAD-binding domain M1S30_02010 PF00042 Globin M1S30_02010 PF00175 Oxidoreductase NAD-binding domain M1S30_02015 PF05872 Bacterial protein of unknown function (DUF853) M1S30_02020 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S30_02025 PF00117 Glutamine amidotransferase class-I M1S30_02030 PF00338 Ribosomal protein S10p/S20e M1S30_02035 PF00297 Ribosomal protein L3 M1S30_02040 PF00573 Ribosomal protein L4/L1 family M1S30_02045 PF00276 Ribosomal protein L23 M1S30_02050 PF03947 Ribosomal Proteins L2, C-terminal domain M1S30_02050 PF00181 Ribosomal Proteins L2, RNA binding domain M1S30_02055 PF00203 Ribosomal protein S19 M1S30_02060 PF00237 Ribosomal protein L22p/L17e M1S30_02070 PF00252 Ribosomal protein L16p/L10e M1S30_02075 PF00831 Ribosomal L29 protein M1S30_02080 PF00366 Ribosomal protein S17 M1S30_02085 PF00238 Ribosomal protein L14p/L23e M1S30_02090 PF00467 KOW motif M1S30_02090 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M1S30_02095 PF00281 Ribosomal protein L5 M1S30_02095 PF00673 ribosomal L5P family C-terminus M1S30_02100 PF00253 Ribosomal protein S14p/S29e M1S30_02105 PF00410 Ribosomal protein S8 M1S30_02110 PF00347 Ribosomal protein L6 M1S30_02115 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M1S30_02120 PF03719 Ribosomal protein S5, C-terminal domain M1S30_02120 PF00333 Ribosomal protein S5, N-terminal domain M1S30_02125 PF00327 Ribosomal protein L30p/L7e M1S30_02130 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M1S30_02135 PF00344 SecY translocase M1S30_02140 PF00444 Ribosomal protein L36 M1S30_02145 PF00416 Ribosomal protein S13/S18 M1S30_02150 PF00411 Ribosomal protein S11 M1S30_02155 PF00163 Ribosomal protein S4/S9 N-terminal domain M1S30_02155 PF01479 S4 domain M1S30_02160 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M1S30_02160 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M1S30_02160 PF01000 RNA polymerase Rpb3/RpoA insert domain M1S30_02165 PF01196 Ribosomal protein L17 M1S30_02170 PF00743 Flavin-binding monooxygenase-like M1S30_02175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_02175 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_02175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_02180 PF03937 Flavinator of succinate dehydrogenase M1S30_02210 PF09526 Probable metal-binding protein (DUF2387) M1S30_02215 PF01432 Peptidase family M3 M1S30_02220 PF17876 Cold shock domain M1S30_02220 PF08461 Ribonuclease R winged-helix domain M1S30_02220 PF08206 Ribonuclease B OB domain M1S30_02220 PF00773 RNB domain M1S30_02220 PF00575 S1 RNA binding domain M1S30_02265 PF01557 Fumarylacetoacetate (FAA) hydrolase family M1S30_02270 PF12833 Helix-turn-helix domain M1S30_02275 PF00892 EamA-like transporter family M1S30_02280 PF03631 Virulence factor BrkB M1S30_02285 PF03358 NADPH-dependent FMN reductase M1S30_02310 PF02130 Uncharacterized protein family UPF0054 M1S30_02315 PF02562 PhoH-like protein M1S30_02320 PF04055 Radical SAM superfamily M1S30_02320 PF01938 TRAM domain M1S30_02320 PF00919 Uncharacterized protein family UPF0004 M1S30_02325 PF01464 Transglycosylase SLT domain M1S30_02325 PF01551 Peptidase family M23 M1S30_02325 PF10145 Phage-related minor tail protein M1S30_02335 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1S30_02335 PF00056 lactate/malate dehydrogenase, NAD binding domain M1S30_02355 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M1S30_02360 PF01066 CDP-alcohol phosphatidyltransferase M1S30_02405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_02405 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_02405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_02410 PF17932 Tetracyclin repressor-like, C-terminal domain M1S30_02410 PF00440 Bacterial regulatory proteins, tetR family M1S30_02425 PF01039 Carboxyl transferase domain M1S30_02430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_02430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_02430 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_02440 PF00289 Biotin carboxylase, N-terminal domain M1S30_02440 PF00364 Biotin-requiring enzyme M1S30_02440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S30_02440 PF02785 Biotin carboxylase C-terminal domain M1S30_02450 PF04386 Stringent starvation protein B M1S30_02455 PF00043 Glutathione S-transferase, C-terminal domain M1S30_02455 PF13417 Glutathione S-transferase, N-terminal domain M1S30_02460 PF00380 Ribosomal protein S9/S16 M1S30_02465 PF00572 Ribosomal protein L13 M1S30_02470 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M1S30_02475 PF00398 Ribosomal RNA adenine dimethylase M1S30_02480 PF00149 Calcineurin-like phosphoesterase M1S30_02500 PF16360 GTP-binding GTPase Middle Region M1S30_02500 PF13167 GTP-binding GTPase N-terminal M1S30_02500 PF01926 50S ribosome-binding GTPase M1S30_02510 PF13091 PLD-like domain M1S30_02515 PF00149 Calcineurin-like phosphoesterase M1S30_02515 PF10518 TAT (twin-arginine translocation) pathway signal sequence M1S30_02520 PF00691 OmpA family M1S30_02520 PF01389 OmpA-like transmembrane domain M1S30_02525 PF17152 Periplasmic sensor domain M1S30_02525 PF00990 Diguanylate cyclase, GGDEF domain M1S30_02560 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_02560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S30_02570 PF04273 Putative phosphatase (DUF442) M1S30_02570 PF00753 Metallo-beta-lactamase superfamily M1S30_02575 PF00561 alpha/beta hydrolase fold M1S30_02580 PF00085 Thioredoxin M1S30_02585 PF03061 Thioesterase superfamily M1S30_02595 PF04461 Protein of unknown function (DUF520) M1S30_02605 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S30_02605 PF01266 FAD dependent oxidoreductase M1S30_02615 PF03795 YCII-related domain M1S30_02620 PF04279 Intracellular septation protein A M1S30_02625 PF02811 PHP domain M1S30_02630 PF01062 Bestrophin, RFP-TM, chloride channel M1S30_02635 PF04002 RadC-like JAB domain M1S30_02640 PF04127 DNA / pantothenate metabolism flavoprotein M1S30_02640 PF02441 Flavoprotein M1S30_02645 PF07549 SecD/SecF GG Motif M1S30_02645 PF02355 Protein export membrane protein M1S30_02650 PF07549 SecD/SecF GG Motif M1S30_02650 PF13721 SecD export protein N-terminal TM region M1S30_02650 PF02355 Protein export membrane protein M1S30_02655 PF02699 Preprotein translocase subunit M1S30_02660 PF01702 Queuine tRNA-ribosyltransferase M1S30_02675 PF02547 Queuosine biosynthesis protein M1S30_02690 PF08335 GlnD PII-uridylyltransferase M1S30_02690 PF03710 Glutamate-ammonia ligase adenylyltransferase M1S30_02695 PF01063 Amino-transferase class IV M1S30_02710 PF01522 Polysaccharide deacetylase M1S30_02715 PF00535 Glycosyl transferase family 2 M1S30_02720 PF13439 Glycosyltransferase Family 4 M1S30_02720 PF00534 Glycosyl transferases group 1 M1S30_02745 PF17101 Stealth protein CR1, conserved region 1 M1S30_02745 PF17102 Stealth protein CR3, conserved region 3 M1S30_02745 PF11380 Stealth protein CR2, conserved region 2 M1S30_02750 PF00152 tRNA synthetases class II (D, K and N) M1S30_02750 PF01336 OB-fold nucleic acid binding domain M1S30_02750 PF02938 GAD domain M1S30_02760 PF00593 TonB dependent receptor M1S30_02760 PF07715 TonB-dependent Receptor Plug Domain M1S30_02780 PF06146 Phosphate-starvation-inducible E M1S30_02785 PF00043 Glutathione S-transferase, C-terminal domain M1S30_02785 PF02798 Glutathione S-transferase, N-terminal domain M1S30_02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_02790 PF03466 LysR substrate binding domain M1S30_02795 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S30_02795 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_02795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_02795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_02800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_02800 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_02800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_02800 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S30_02810 PF00672 HAMP domain M1S30_02810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_02810 PF00512 His Kinase A (phospho-acceptor) domain M1S30_02815 PF00486 Transcriptional regulatory protein, C terminal M1S30_02815 PF00072 Response regulator receiver domain M1S30_02820 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M1S30_02840 PF01923 Cobalamin adenosyltransferase M1S30_02845 PF07715 TonB-dependent Receptor Plug Domain M1S30_02845 PF00593 TonB dependent receptor M1S30_02850 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M1S30_02855 PF00291 Pyridoxal-phosphate dependent enzyme M1S30_02880 PF00290 Tryptophan synthase alpha chain M1S30_02885 PF01039 Carboxyl transferase domain M1S30_02890 PF08245 Mur ligase middle domain M1S30_02890 PF02875 Mur ligase family, glutamate ligase domain M1S30_02905 PF00753 Metallo-beta-lactamase superfamily M1S30_02910 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S30_02910 PF00578 AhpC/TSA family M1S30_02915 PF02810 SEC-C motif M1S30_02915 PF07517 SecA DEAD-like domain M1S30_02915 PF01043 SecA preprotein cross-linking domain M1S30_02915 PF07516 SecA Wing and Scaffold domain M1S30_02925 PF07690 Major Facilitator Superfamily M1S30_02925 PF00083 Sugar (and other) transporter M1S30_02930 PF03006 Haemolysin-III related M1S30_02955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S30_02955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S30_02955 PF00378 Enoyl-CoA hydratase/isomerase M1S30_02960 PF02803 Thiolase, C-terminal domain M1S30_02960 PF00108 Thiolase, N-terminal domain M1S30_02965 PF12833 Helix-turn-helix domain M1S30_02965 PF02311 AraC-like ligand binding domain M1S30_02970 PF02515 CoA-transferase family III M1S30_02975 PF04966 Carbohydrate-selective porin, OprB family M1S30_02980 PF01011 PQQ enzyme repeat M1S30_02985 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S30_02985 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S30_02995 PF00893 Small Multidrug Resistance protein M1S30_03005 PF00108 Thiolase, N-terminal domain M1S30_03005 PF02803 Thiolase, C-terminal domain M1S30_03015 PF13505 Outer membrane protein beta-barrel domain M1S30_03015 PF00691 OmpA family M1S30_03025 PF01139 tRNA-splicing ligase RtcB M1S30_03030 PF00324 Amino acid permease M1S30_03035 PF08468 Methyltransferase small domain N-terminal M1S30_03035 PF05175 Methyltransferase small domain M1S30_03040 PF00860 Permease family M1S30_03045 PF00009 Elongation factor Tu GTP binding domain M1S30_03045 PF00679 Elongation factor G C-terminus M1S30_03045 PF03144 Elongation factor Tu domain 2 M1S30_03050 PF01741 Large-conductance mechanosensitive channel, MscL M1S30_03065 PF06827 Zinc finger found in FPG and IleRS M1S30_03065 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M1S30_03065 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M1S30_03070 PF02245 Methylpurine-DNA glycosylase (MPG) M1S30_03090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S30_03105 PF13098 Thioredoxin-like domain M1S30_03105 PF10411 Disulfide bond isomerase protein N-terminus M1S30_03110 PF01571 Aminomethyltransferase folate-binding domain M1S30_03120 PF04343 Protein of unknown function, DUF488 M1S30_03125 PF03831 PhnA domain M1S30_03125 PF08274 PhnA Zinc-Ribbon M1S30_03130 PF07411 Domain of unknown function (DUF1508) M1S30_03135 PF03129 Anticodon binding domain M1S30_03135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S30_03135 PF04073 Aminoacyl-tRNA editing domain M1S30_03140 PF00873 AcrB/AcrD/AcrF family M1S30_03155 PF00072 Response regulator receiver domain M1S30_03160 PF00072 Response regulator receiver domain M1S30_03165 PF01584 CheW-like domain M1S30_03170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M1S30_03170 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M1S30_03175 PF00072 Response regulator receiver domain M1S30_03175 PF01584 CheW-like domain M1S30_03175 PF01627 Hpt domain M1S30_03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_03185 PF01546 Peptidase family M20/M25/M40 M1S30_03185 PF07687 Peptidase dimerisation domain M1S30_03190 PF08085 Entericidin EcnA/B family M1S30_03200 PF04304 Protein of unknown function (DUF454) M1S30_03205 PF03734 L,D-transpeptidase catalytic domain M1S30_03205 PF17969 L,D-transpeptidase C-terminal domain M1S30_03245 PF00175 Oxidoreductase NAD-binding domain M1S30_03245 PF00258 Flavodoxin M1S30_03245 PF00667 FAD binding domain M1S30_03255 PF12805 FUSC-like inner membrane protein yccS M1S30_03260 PF07690 Major Facilitator Superfamily M1S30_03265 PF00881 Nitroreductase family M1S30_03280 PF01235 Sodium:alanine symporter family M1S30_03285 PF01734 Patatin-like phospholipase M1S30_03290 PF13291 ACT domain M1S30_03290 PF00291 Pyridoxal-phosphate dependent enzyme M1S30_03295 PF05992 SbmA/BacA-like family M1S30_03325 PF02934 GatB/GatE catalytic domain M1S30_03325 PF02637 GatB domain M1S30_03330 PF01425 Amidase M1S30_03335 PF02686 Glu-tRNAGln amidotransferase C subunit M1S30_03345 PF04085 rod shape-determining protein MreC M1S30_03350 PF04093 rod shape-determining protein MreD M1S30_03355 PF02545 Maf-like protein M1S30_03360 PF10150 Ribonuclease E/G family M1S30_03360 PF00575 S1 RNA binding domain M1S30_03370 PF06974 Protein of unknown function (DUF1298) M1S30_03370 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain M1S30_03375 PF01507 Phosphoadenosine phosphosulfate reductase family M1S30_03390 PF02525 Flavodoxin-like fold M1S30_03410 PF02673 Bacitracin resistance protein BacA M1S30_03415 PF12833 Helix-turn-helix domain M1S30_03415 PF06719 AraC-type transcriptional regulator N-terminus M1S30_03420 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S30_03420 PF14765 Polyketide synthase dehydratase M1S30_03420 PF00550 Phosphopantetheine attachment site M1S30_03420 PF00698 Acyl transferase domain M1S30_03420 PF08659 KR domain M1S30_03420 PF08990 Erythronolide synthase docking M1S30_03420 PF09277 Erythronolide synthase, docking M1S30_03420 PF16197 Ketoacyl-synthetase C-terminal extension M1S30_03420 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S30_03420 PF08240 Alcohol dehydrogenase GroES-like domain M1S30_03425 PF01965 DJ-1/PfpI family M1S30_03435 PF00324 Amino acid permease M1S30_03440 PF04303 PrpF protein M1S30_03445 PF00348 Polyprenyl synthetase M1S30_03450 PF04237 YjbR M1S30_03455 PF01145 SPFH domain / Band 7 family M1S30_03465 PF01734 Patatin-like phospholipase M1S30_03485 PF00884 Sulfatase M1S30_03485 PF08019 Phosphoethanolamine transferase EptA/EptB M1S30_03490 PF00486 Transcriptional regulatory protein, C terminal M1S30_03490 PF00072 Response regulator receiver domain M1S30_03495 PF08521 Two-component sensor kinase N-terminal M1S30_03495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_03495 PF00512 His Kinase A (phospho-acceptor) domain M1S30_03505 PF00909 Ammonium Transporter Family M1S30_03510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_03510 PF03466 LysR substrate binding domain M1S30_03530 PF08264 Anticodon-binding domain of tRNA M1S30_03530 PF00133 tRNA synthetases class I (I, L, M and V) M1S30_03530 PF10458 Valyl tRNA synthetase tRNA binding arm M1S30_03550 PF01906 Putative heavy-metal-binding M1S30_03555 PF01906 Putative heavy-metal-binding M1S30_03560 PF02321 Outer membrane efflux protein M1S30_03565 PF00873 AcrB/AcrD/AcrF family M1S30_03570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S30_03570 PF00529 HlyD membrane-fusion protein of T1SS M1S30_03575 PF01569 PAP2 superfamily M1S30_03585 PF00348 Polyprenyl synthetase M1S30_03595 PF00829 Ribosomal prokaryotic L21 protein M1S30_03600 PF01016 Ribosomal L27 protein M1S30_03605 PF03548 Outer membrane lipoprotein carrier protein LolA M1S30_03615 PF02403 Seryl-tRNA synthetase N-terminal domain M1S30_03615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S30_03620 PF10414 Sirohaem synthase dimerisation region M1S30_03620 PF14824 Sirohaem biosynthesis protein central M1S30_03620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S30_03625 PF00588 SpoU rRNA Methylase family M1S30_03630 PF01638 HxlR-like helix-turn-helix M1S30_03635 PF03358 NADPH-dependent FMN reductase M1S30_03640 PF13520 Amino acid permease M1S30_03645 PF00465 Iron-containing alcohol dehydrogenase M1S30_03655 PF03099 Biotin/lipoate A/B protein ligase family M1S30_03660 PF04359 Protein of unknown function (DUF493) M1S30_03665 PF00140 Sigma-70 factor, region 1.2 M1S30_03665 PF04539 Sigma-70 region 3 M1S30_03665 PF04542 Sigma-70 region 2 M1S30_03665 PF04546 Sigma-70, non-essential region M1S30_03665 PF04545 Sigma-70, region 4 M1S30_03665 PF03979 Sigma-70 factor, region 1.1 M1S30_03685 PF17773 UPF0176 acylphosphatase like domain M1S30_03685 PF00581 Rhodanese-like domain M1S30_03695 PF00285 Citrate synthase, C-terminal domain M1S30_03700 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S30_03705 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S30_03710 PF02910 Fumarate reductase flavoprotein C-term M1S30_03710 PF00890 FAD binding domain M1S30_03715 PF13085 2Fe-2S iron-sulfur cluster binding domain M1S30_03730 PF16078 2-oxoglutarate dehydrogenase N-terminus M1S30_03730 PF00676 Dehydrogenase E1 component M1S30_03730 PF02779 Transketolase, pyrimidine binding domain M1S30_03730 PF16870 2-oxoglutarate dehydrogenase C-terminal M1S30_03735 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S30_03735 PF00364 Biotin-requiring enzyme M1S30_03735 PF02817 e3 binding domain M1S30_03740 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_03740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S30_03745 PF08442 ATP-grasp domain M1S30_03745 PF00549 CoA-ligase M1S30_03750 PF00549 CoA-ligase M1S30_03750 PF02629 CoA binding domain M1S30_03755 PF00579 tRNA synthetases class I (W and Y) M1S30_03760 PF05661 Protein of unknown function (DUF808) M1S30_03765 PF04228 Putative neutral zinc metallopeptidase M1S30_03775 PF00999 Sodium/hydrogen exchanger family M1S30_03790 PF09587 Bacterial capsule synthesis protein PGA_cap M1S30_03800 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S30_03805 PF00582 Universal stress protein family M1S30_03810 PF00132 Bacterial transferase hexapeptide (six repeats) M1S30_03815 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S30_03815 PF03449 Transcription elongation factor, N-terminal M1S30_03820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S30_03820 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M1S30_03820 PF02142 MGS-like domain M1S30_03825 PF00117 Glutamine amidotransferase class-I M1S30_03825 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M1S30_03840 PF01985 CRS1 / YhbY (CRM) domain M1S30_03845 PF01728 FtsJ-like methyltransferase M1S30_03850 PF01434 Peptidase family M41 M1S30_03850 PF06480 FtsH Extracellular M1S30_03850 PF17862 AAA+ lid domain M1S30_03850 PF00004 ATPase family associated with various cellular activities (AAA) M1S30_03855 PF00809 Pterin binding enzyme M1S30_03875 PF16655 PhoD-like phosphatase, N-terminal domain M1S30_03875 PF09423 PhoD-like phosphatase M1S30_03890 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M1S30_03890 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M1S30_03905 PF00083 Sugar (and other) transporter M1S30_03910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1S30_03910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1S30_03915 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M1S30_03915 PF01266 FAD dependent oxidoreductase M1S30_03920 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1S30_03920 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1S30_03925 PF00781 Diacylglycerol kinase catalytic domain M1S30_03930 PF00149 Calcineurin-like phosphoesterase M1S30_03940 PF00166 Chaperonin 10 Kd subunit M1S30_03945 PF00118 TCP-1/cpn60 chaperonin family M1S30_03950 PF01219 Prokaryotic diacylglycerol kinase M1S30_03960 PF03009 Glycerophosphoryl diester phosphodiesterase family M1S30_03965 PF00873 AcrB/AcrD/AcrF family M1S30_03975 PF01435 Peptidase family M48 M1S30_03980 PF01464 Transglycosylase SLT domain M1S30_03985 PF01171 PP-loop family M1S30_03995 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S30_03995 PF01464 Transglycosylase SLT domain M1S30_04000 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S30_04000 PF03449 Transcription elongation factor, N-terminal M1S30_04015 PF00975 Thioesterase domain M1S30_04015 PF00668 Condensation domain M1S30_04015 PF00550 Phosphopantetheine attachment site M1S30_04015 PF13193 AMP-binding enzyme C-terminal domain M1S30_04015 PF00501 AMP-binding enzyme M1S30_04045 PF00881 Nitroreductase family M1S30_04060 PF02595 Glycerate kinase family M1S30_04070 PF02634 FdhD/NarQ family M1S30_04075 PF06803 Protein of unknown function (DUF1232) M1S30_04080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S30_04080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S30_04080 PF11890 Domain of unknown function (DUF3410) M1S30_04085 PF00152 tRNA synthetases class II (D, K and N) M1S30_04095 PF18073 Rubredoxin metal binding domain M1S30_04100 PF00324 Amino acid permease M1S30_04110 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M1S30_04110 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M1S30_04115 PF01678 Diaminopimelate epimerase M1S30_04120 PF01810 LysE type translocator M1S30_04125 PF02899 Phage integrase, N-terminal SAM-like domain M1S30_04125 PF00589 Phage integrase family M1S30_04130 PF01012 Electron transfer flavoprotein domain M1S30_04135 PF01012 Electron transfer flavoprotein domain M1S30_04135 PF00766 Electron transfer flavoprotein FAD-binding domain M1S30_04140 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S30_04140 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S30_04155 PF00535 Glycosyl transferase family 2 M1S30_04175 PF13533 Biotin-lipoyl like M1S30_04185 PF00266 Aminotransferase class-V M1S30_04200 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M1S30_04210 PF02687 FtsX-like permease family M1S30_04210 PF12704 MacB-like periplasmic core domain M1S30_04215 PF00005 ABC transporter M1S30_04220 PF00753 Metallo-beta-lactamase superfamily M1S30_04220 PF13567 Domain of unknown function (DUF4131) M1S30_04220 PF03772 Competence protein M1S30_04230 PF01343 Peptidase family S49 M1S30_04230 PF06965 Na+/H+ antiporter 1 M1S30_04235 PF12697 Alpha/beta hydrolase family M1S30_04240 PF00551 Formyl transferase M1S30_04245 PF00586 AIR synthase related protein, N-terminal domain M1S30_04245 PF02769 AIR synthase related protein, C-terminal domain M1S30_04250 PF01594 AI-2E family transporter M1S30_04255 PF00308 Bacterial dnaA protein M1S30_04255 PF08299 Bacterial dnaA protein helix-turn-helix M1S30_04255 PF11638 DnaA N-terminal domain M1S30_04285 PF00588 SpoU rRNA Methylase family M1S30_04285 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S30_04290 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M1S30_04300 PF00691 OmpA family M1S30_04305 PF07676 WD40-like Beta Propeller Repeat M1S30_04305 PF04052 TolB amino-terminal domain M1S30_04315 PF02472 Biopolymer transport protein ExbD/TolR M1S30_04320 PF01618 MotA/TolQ/ExbB proton channel family M1S30_04325 PF03061 Thioesterase superfamily M1S30_04330 PF07687 Peptidase dimerisation domain M1S30_04330 PF01546 Peptidase family M20/M25/M40 M1S30_04335 PF05496 Holliday junction DNA helicase RuvB P-loop domain M1S30_04335 PF17864 RuvB AAA lid domain M1S30_04335 PF05491 RuvB C-terminal winged helix domain M1S30_04340 PF07499 RuvA, C-terminal domain M1S30_04340 PF01330 RuvA N terminal domain M1S30_04345 PF01966 HD domain M1S30_04350 PF02769 AIR synthase related protein, C-terminal domain M1S30_04350 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M1S30_04350 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M1S30_04355 PF07690 Major Facilitator Superfamily M1S30_04360 PF01784 NIF3 (NGG1p interacting factor 3) M1S30_04365 PF00378 Enoyl-CoA hydratase/isomerase M1S30_04370 PF00293 NUDIX domain M1S30_04370 PF01467 Cytidylyltransferase-like M1S30_04380 PF00578 AhpC/TSA family M1S30_04395 PF06508 Queuosine biosynthesis protein QueC M1S30_04405 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M1S30_04405 PF14602 Hexapeptide repeat of succinyl-transferase M1S30_04405 PF00132 Bacterial transferase hexapeptide (six repeats) M1S30_04415 PF03466 LysR substrate binding domain M1S30_04415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_04420 PF12857 TOBE-like domain M1S30_04420 PF00005 ABC transporter M1S30_04425 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_04430 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_04445 PF01063 Amino-transferase class IV M1S30_04450 PF02618 YceG-like family M1S30_04455 PF02223 Thymidylate kinase M1S30_04465 PF02910 Fumarate reductase flavoprotein C-term M1S30_04465 PF00890 FAD binding domain M1S30_04470 PF13180 PDZ domain M1S30_04480 PF00009 Elongation factor Tu GTP binding domain M1S30_04480 PF00679 Elongation factor G C-terminus M1S30_04480 PF06421 GTP-binding protein LepA C-terminus M1S30_04480 PF03144 Elongation factor Tu domain 2 M1S30_04485 PF10502 Signal peptidase, peptidase S26 M1S30_04495 PF14622 Ribonuclease-III-like M1S30_04495 PF00035 Double-stranded RNA binding motif M1S30_04500 PF01926 50S ribosome-binding GTPase M1S30_04500 PF07650 KH domain M1S30_04510 PF11967 Recombination protein O N terminal M1S30_04510 PF02565 Recombination protein O C terminal M1S30_04515 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M1S30_04520 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M1S30_04525 PF00106 short chain dehydrogenase M1S30_04555 PF00155 Aminotransferase class I and II M1S30_04565 PF00990 Diguanylate cyclase, GGDEF domain M1S30_04565 PF17151 Periplasmic sensor domain M1S30_04575 PF17757 UvrB interaction domain M1S30_04575 PF04851 Type III restriction enzyme, res subunit M1S30_04575 PF00271 Helicase conserved C-terminal domain M1S30_04575 PF02151 UvrB/uvrC motif M1S30_04575 PF12344 Ultra-violet resistance protein B M1S30_04585 PF00892 EamA-like transporter family M1S30_04590 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S30_04590 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S30_04605 PF01018 GTP1/OBG M1S30_04605 PF01926 50S ribosome-binding GTPase M1S30_04610 PF01472 PUA domain M1S30_04610 PF00696 Amino acid kinase family M1S30_04620 PF07759 Protein of unknown function (DUF1615) M1S30_04625 PF01207 Dihydrouridine synthase (Dus) M1S30_04630 PF03060 Nitronate monooxygenase M1S30_04645 PF02350 UDP-N-acetylglucosamine 2-epimerase M1S30_04675 PF00875 DNA photolyase M1S30_04675 PF03441 FAD binding domain of DNA photolyase M1S30_04680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S30_04685 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_04690 PF07943 Penicillin-binding protein 5, C-terminal domain M1S30_04690 PF00768 D-alanyl-D-alanine carboxypeptidase M1S30_04700 PF03971 Monomeric isocitrate dehydrogenase M1S30_04705 PF00849 RNA pseudouridylate synthase M1S30_04710 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S30_04730 PF06779 Uncharacterised MFS-type transporter YbfB M1S30_04735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_04735 PF03466 LysR substrate binding domain M1S30_04740 PF00375 Sodium:dicarboxylate symporter family M1S30_04745 PF02567 Phenazine biosynthesis-like protein M1S30_04750 PF00675 Insulinase (Peptidase family M16) M1S30_04750 PF05193 Peptidase M16 inactive domain M1S30_04775 PF02581 Thiamine monophosphate synthase M1S30_04780 PF00202 Aminotransferase class-III M1S30_04790 PF00849 RNA pseudouridylate synthase M1S30_04795 PF18337 RapA N-terminal Tudor like domain M1S30_04795 PF00176 SNF2 family N-terminal domain M1S30_04795 PF12137 RNA polymerase recycling family C-terminal M1S30_04795 PF00271 Helicase conserved C-terminal domain M1S30_04795 PF18339 RapA N-terminal Tudor like domain 1 M1S30_04805 PF00440 Bacterial regulatory proteins, tetR family M1S30_04810 PF00970 Oxidoreductase FAD-binding domain M1S30_04810 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S30_04810 PF00175 Oxidoreductase NAD-binding domain M1S30_04815 PF00487 Fatty acid desaturase M1S30_04825 PF17754 MftR C-terminal domain M1S30_04825 PF00440 Bacterial regulatory proteins, tetR family M1S30_04835 PF00202 Aminotransferase class-III M1S30_04840 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S30_04845 PF00171 Aldehyde dehydrogenase family M1S30_04850 PF01037 Lrp/AsnC ligand binding domain M1S30_04855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S30_04855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S30_04855 PF00205 Thiamine pyrophosphate enzyme, central domain M1S30_04860 PF00324 Amino acid permease M1S30_04865 PF12849 PBP superfamily domain M1S30_04870 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_04875 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_04880 PF00005 ABC transporter M1S30_04885 PF01343 Peptidase family S49 M1S30_04885 PF08496 Peptidase family S49 N-terminal M1S30_04900 PF08328 Adenylosuccinate lyase C-terminal M1S30_04900 PF00206 Lyase M1S30_04905 PF04356 Protein of unknown function (DUF489) M1S30_04915 PF13344 Haloacid dehalogenase-like hydrolase M1S30_04915 PF00293 NUDIX domain M1S30_04920 PF00132 Bacterial transferase hexapeptide (six repeats) M1S30_04925 PF07943 Penicillin-binding protein 5, C-terminal domain M1S30_04925 PF00768 D-alanyl-D-alanine carboxypeptidase M1S30_04940 PF01975 Survival protein SurE M1S30_04945 PF01476 LysM domain M1S30_04945 PF01551 Peptidase family M23 M1S30_04950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_04950 PF03466 LysR substrate binding domain M1S30_04955 PF13654 AAA domain M1S30_04955 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S30_04960 PF07690 Major Facilitator Superfamily M1S30_04965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S30_04970 PF13593 SBF-like CPA transporter family (DUF4137) M1S30_04975 PF01197 Ribosomal protein L31 M1S30_04990 PF04055 Radical SAM superfamily M1S30_04995 PF09285 Elongation factor P, C-terminal M1S30_04995 PF08207 Elongation factor P (EF-P) KOW-like domain M1S30_04995 PF01132 Elongation factor P (EF-P) OB domain M1S30_05000 PF13722 5TM C-terminal transporter carbon starvation CstA M1S30_05000 PF02554 Carbon starvation protein CstA M1S30_05005 PF04328 Selenoprotein, putative M1S30_05040 PF17853 GGDEF-like domain M1S30_05040 PF06018 CodY GAF-like domain M1S30_05040 PF13556 PucR C-terminal helix-turn-helix domain M1S30_05055 PF00171 Aldehyde dehydrogenase family M1S30_05060 PF00324 Amino acid permease M1S30_05065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_05065 PF03466 LysR substrate binding domain M1S30_05070 PF02028 BCCT, betaine/carnitine/choline family transporter M1S30_05075 PF02028 BCCT, betaine/carnitine/choline family transporter M1S30_05080 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S30_05080 PF00355 Rieske [2Fe-2S] domain M1S30_05085 PF00171 Aldehyde dehydrogenase family M1S30_05095 PF18113 Rubredoxin binding C-terminal domain M1S30_05095 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_05100 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S30_05100 PF01266 FAD dependent oxidoreductase M1S30_05120 PF00892 EamA-like transporter family M1S30_05130 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M1S30_05135 PF00083 Sugar (and other) transporter M1S30_05140 PF13378 Enolase C-terminal domain-like M1S30_05140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S30_05145 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S30_05145 PF14765 Polyketide synthase dehydratase M1S30_05145 PF00550 Phosphopantetheine attachment site M1S30_05145 PF08659 KR domain M1S30_05145 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S30_05145 PF16197 Ketoacyl-synthetase C-terminal extension M1S30_05145 PF08240 Alcohol dehydrogenase GroES-like domain M1S30_05145 PF08990 Erythronolide synthase docking M1S30_05145 PF09277 Erythronolide synthase, docking M1S30_05145 PF00698 Acyl transferase domain M1S30_05150 PF00440 Bacterial regulatory proteins, tetR family M1S30_05170 PF02678 Pirin M1S30_05170 PF17954 Quercetinase C-terminal cupin domain M1S30_05180 PF08348 YheO-like PAS domain M1S30_05180 PF13309 HTH domain M1S30_05190 PF00501 AMP-binding enzyme M1S30_05190 PF00550 Phosphopantetheine attachment site M1S30_05190 PF00668 Condensation domain M1S30_05190 PF13193 AMP-binding enzyme C-terminal domain M1S30_05195 PF00975 Thioesterase domain M1S30_05195 PF00501 AMP-binding enzyme M1S30_05195 PF13193 AMP-binding enzyme C-terminal domain M1S30_05195 PF00668 Condensation domain M1S30_05195 PF00550 Phosphopantetheine attachment site M1S30_05200 PF01032 FecCD transport family M1S30_05205 PF01032 FecCD transport family M1S30_05210 PF00005 ABC transporter M1S30_05215 PF01497 Periplasmic binding protein M1S30_05220 PF07715 TonB-dependent Receptor Plug Domain M1S30_05220 PF00593 TonB dependent receptor M1S30_05225 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S30_05230 PF00501 AMP-binding enzyme M1S30_05230 PF00668 Condensation domain M1S30_05230 PF00550 Phosphopantetheine attachment site M1S30_05235 PF13193 AMP-binding enzyme C-terminal domain M1S30_05235 PF00501 AMP-binding enzyme M1S30_05240 PF00857 Isochorismatase family M1S30_05240 PF00550 Phosphopantetheine attachment site M1S30_05245 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S30_05255 PF00005 ABC transporter M1S30_05260 PF00005 ABC transporter M1S30_05265 PF00975 Thioesterase domain M1S30_05275 PF00425 chorismate binding enzyme M1S30_05285 PF01208 Uroporphyrinogen decarboxylase (URO-D) M1S30_05290 PF05675 Protein of unknown function (DUF817) M1S30_05305 PF00144 Beta-lactamase M1S30_05315 PF01227 GTP cyclohydrolase I M1S30_05320 PF01799 [2Fe-2S] binding domain M1S30_05320 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S30_05325 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M1S30_05325 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M1S30_05340 PF00218 Indole-3-glycerol phosphate synthase M1S30_05345 PF02885 Glycosyl transferase family, helical bundle domain M1S30_05345 PF00591 Glycosyl transferase family, a/b domain M1S30_05350 PF07715 TonB-dependent Receptor Plug Domain M1S30_05350 PF00593 TonB dependent receptor M1S30_05355 PF11838 ERAP1-like C-terminal domain M1S30_05355 PF01433 Peptidase family M1 domain M1S30_05360 PF00117 Glutamine amidotransferase class-I M1S30_05370 PF00854 POT family M1S30_05375 PF00120 Glutamine synthetase, catalytic domain M1S30_05375 PF03951 Glutamine synthetase, beta-Grasp domain M1S30_05380 PF04345 Chorismate lyase M1S30_05385 PF01040 UbiA prenyltransferase family M1S30_05420 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M1S30_05420 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M1S30_05425 PF01784 NIF3 (NGG1p interacting factor 3) M1S30_05430 PF13180 PDZ domain M1S30_05435 PF01743 Poly A polymerase head domain M1S30_05435 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S30_05440 PF01515 Phosphate acetyl/butaryl transferase M1S30_05440 PF00390 Malic enzyme, N-terminal domain M1S30_05440 PF03949 Malic enzyme, NAD binding domain M1S30_05445 PF00563 EAL domain M1S30_05445 PF03707 Bacterial signalling protein N terminal repeat M1S30_05445 PF00990 Diguanylate cyclase, GGDEF domain M1S30_05450 PF04452 RNA methyltransferase M1S30_05455 PF02219 Methylenetetrahydrofolate reductase M1S30_05460 PF05221 S-adenosyl-L-homocysteine hydrolase M1S30_05460 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M1S30_05475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_05475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_05475 PF09317 Domain of unknown function (DUF1974) M1S30_05480 PF04055 Radical SAM superfamily M1S30_05485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S30_05485 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_05495 PF07690 Major Facilitator Superfamily M1S30_05505 PF00557 Metallopeptidase family M24 M1S30_05510 PF00318 Ribosomal protein S2 M1S30_05515 PF00889 Elongation factor TS M1S30_05525 PF12833 Helix-turn-helix domain M1S30_05545 PF03330 Lytic transglycolase M1S30_05545 PF05036 Sporulation related domain M1S30_05550 PF13406 Transglycosylase SLT domain M1S30_05555 PF01098 Cell cycle protein M1S30_05565 PF14489 QueF-like protein M1S30_05565 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M1S30_05570 PF01061 ABC-2 type transporter M1S30_05575 PF00005 ABC transporter M1S30_05605 PF00464 Serine hydroxymethyltransferase M1S30_05610 PF02321 Outer membrane efflux protein M1S30_05615 PF00873 AcrB/AcrD/AcrF family M1S30_05620 PF13533 Biotin-lipoyl like M1S30_05625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_05625 PF03466 LysR substrate binding domain M1S30_05630 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S30_05635 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_05640 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_05645 PF00005 ABC transporter M1S30_05650 PF00893 Small Multidrug Resistance protein M1S30_05655 PF00037 4Fe-4S binding domain M1S30_05660 PF16325 Peptidase family U32 C-terminal domain M1S30_05660 PF01136 Peptidase family U32 M1S30_05665 PF00155 Aminotransferase class I and II M1S30_05665 PF00392 Bacterial regulatory proteins, gntR family M1S30_05670 PF02567 Phenazine biosynthesis-like protein M1S30_05675 PF00970 Oxidoreductase FAD-binding domain M1S30_05675 PF00175 Oxidoreductase NAD-binding domain M1S30_05680 PF18389 TrmO C-terminal domain M1S30_05680 PF01980 tRNA-methyltransferase O M1S30_05690 PF00437 Type II/IV secretion system protein M1S30_05690 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S30_05700 PF00072 Response regulator receiver domain M1S30_05700 PF00486 Transcriptional regulatory protein, C terminal M1S30_05705 PF08521 Two-component sensor kinase N-terminal M1S30_05705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_05705 PF00512 His Kinase A (phospho-acceptor) domain M1S30_05715 PF00293 NUDIX domain M1S30_05725 PF00905 Penicillin binding protein transpeptidase domain M1S30_05725 PF00912 Transglycosylase M1S30_05725 PF14814 Bifunctional transglycosylase second domain M1S30_05730 PF01513 ATP-NAD kinase M1S30_05735 PF07023 Protein of unknown function (DUF1315) M1S30_05740 PF00591 Glycosyl transferase family, a/b domain M1S30_05740 PF02885 Glycosyl transferase family, helical bundle domain M1S30_05745 PF00375 Sodium:dicarboxylate symporter family M1S30_05750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_05750 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_05750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_05755 PF00756 Putative esterase M1S30_05760 PF01842 ACT domain M1S30_05760 PF01817 Chorismate mutase type II M1S30_05760 PF00800 Prephenate dehydratase M1S30_05765 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S30_05775 PF07687 Peptidase dimerisation domain M1S30_05775 PF01546 Peptidase family M20/M25/M40 M1S30_05780 PF12706 Beta-lactamase superfamily domain M1S30_05790 PF03883 Peroxide stress protein YaaA M1S30_05800 PF05690 Thiazole biosynthesis protein ThiG M1S30_05810 PF04241 Protein of unknown function (DUF423) M1S30_05815 PF04542 Sigma-70 region 2 M1S30_05815 PF04545 Sigma-70, region 4 M1S30_05815 PF00140 Sigma-70 factor, region 1.2 M1S30_05845 PF00881 Nitroreductase family M1S30_05850 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M1S30_05850 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M1S30_05860 PF00589 Phage integrase family M1S30_05955 PF01555 DNA methylase M1S30_06200 PF01180 Dihydroorotate dehydrogenase M1S30_06205 PF02674 Colicin V production protein M1S30_06210 PF00156 Phosphoribosyl transferase domain M1S30_06225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S30_06225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S30_06230 PF01435 Peptidase family M48 M1S30_06235 PF09424 Yqey-like protein M1S30_06240 PF01165 Ribosomal protein S21 M1S30_06245 PF00814 Glycoprotease family M1S30_06265 PF00069 Protein kinase domain M1S30_06290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_06290 PF03466 LysR substrate binding domain M1S30_06295 PF00202 Aminotransferase class-III M1S30_06300 PF00171 Aldehyde dehydrogenase family M1S30_06305 PF00324 Amino acid permease M1S30_06335 PF04076 Bacterial OB fold (BOF) protein M1S30_06360 PF00561 alpha/beta hydrolase fold M1S30_06365 PF03616 Sodium/glutamate symporter M1S30_06375 PF07729 FCD domain M1S30_06375 PF00392 Bacterial regulatory proteins, gntR family M1S30_06425 PF08946 Osmosensory transporter coiled coil M1S30_06425 PF00083 Sugar (and other) transporter M1S30_06435 PF13610 DDE domain M1S30_06445 PF01636 Phosphotransferase enzyme family M1S30_06450 PF13610 DDE domain M1S30_06465 PF00132 Bacterial transferase hexapeptide (six repeats) M1S30_06475 PF00893 Small Multidrug Resistance protein M1S30_06480 PF00809 Pterin binding enzyme M1S30_06495 PF07091 Ribosomal RNA methyltransferase (FmrO) M1S30_06510 PF00005 ABC transporter M1S30_06510 PF12848 ABC transporter M1S30_06515 PF01636 Phosphotransferase enzyme family M1S30_06525 PF03050 Transposase IS66 family M1S30_06525 PF13817 IS66 C-terminal element M1S30_06525 PF13007 Transposase C of IS166 homeodomain M1S30_06525 PF13005 zinc-finger binding domain of transposase IS66 M1S30_06530 PF13610 DDE domain M1S30_06545 PF13419 Haloacid dehalogenase-like hydrolase M1S30_06555 PF13296 Putative type VI secretion system Rhs element Vgr M1S30_06555 PF04717 Type VI secretion system, phage-baseplate injector M1S30_06555 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S30_06560 PF03527 RHS protein M1S30_06560 PF05593 RHS Repeat M1S30_06575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_06575 PF03466 LysR substrate binding domain M1S30_06580 PF01566 Natural resistance-associated macrophage protein M1S30_06585 PF03746 LamB/YcsF family M1S30_06590 PF07286 Protein of unknown function (DUF1445) M1S30_06600 PF00364 Biotin-requiring enzyme M1S30_06600 PF00289 Biotin carboxylase, N-terminal domain M1S30_06600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S30_06600 PF02785 Biotin carboxylase C-terminal domain M1S30_06605 PF00654 Voltage gated chloride channel M1S30_06625 PF00440 Bacterial regulatory proteins, tetR family M1S30_06635 PF00107 Zinc-binding dehydrogenase M1S30_06635 PF08240 Alcohol dehydrogenase GroES-like domain M1S30_06635 PF13823 Alcohol dehydrogenase GroES-associated M1S30_06650 PF02785 Biotin carboxylase C-terminal domain M1S30_06650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S30_06650 PF00289 Biotin carboxylase, N-terminal domain M1S30_06655 PF02525 Flavodoxin-like fold M1S30_06675 PF01402 Ribbon-helix-helix protein, copG family M1S30_06675 PF08753 NikR C terminal nickel binding domain M1S30_06680 PF01425 Amidase M1S30_06685 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S30_06690 PF00005 ABC transporter M1S30_06715 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M1S30_06730 PF05947 Type VI secretion system, TssF M1S30_06745 PF06744 Type VI secretion protein IcmF C-terminal M1S30_06745 PF06761 Intracellular multiplication and human macrophage-killing M1S30_06745 PF14331 ImcF-related N-terminal domain M1S30_06755 PF00691 OmpA family M1S30_06755 PF01389 OmpA-like transmembrane domain M1S30_06770 PF10431 C-terminal, D2-small domain, of ClpB protein M1S30_06770 PF17871 AAA lid domain M1S30_06770 PF07724 AAA domain (Cdc48 subfamily) M1S30_06770 PF00004 ATPase family associated with various cellular activities (AAA) M1S30_06775 PF06812 ImpA, N-terminal, type VI secretion system M1S30_06780 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M1S30_06800 PF03466 LysR substrate binding domain M1S30_06800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_06810 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S30_06815 PF07690 Major Facilitator Superfamily M1S30_06830 PF02677 Epoxyqueuosine reductase QueH M1S30_06845 PF09278 MerR, DNA binding M1S30_06845 PF00376 MerR family regulatory protein M1S30_06855 PF00701 Dihydrodipicolinate synthetase family M1S30_06865 PF00392 Bacterial regulatory proteins, gntR family M1S30_06870 PF05544 Proline racemase M1S30_06875 PF01266 FAD dependent oxidoreductase M1S30_06885 PF04324 BFD-like [2Fe-2S] binding domain M1S30_06885 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_06895 PF00083 Sugar (and other) transporter M1S30_06900 PF00171 Aldehyde dehydrogenase family M1S30_06905 PF13520 Amino acid permease M1S30_06910 PF03315 Serine dehydratase beta chain M1S30_06910 PF03313 Serine dehydratase alpha chain M1S30_06915 PF01575 MaoC like domain M1S30_06915 PF00171 Aldehyde dehydrogenase family M1S30_06920 PF05138 Phenylacetic acid catabolic protein M1S30_06925 PF06243 Phenylacetic acid degradation B M1S30_06930 PF05138 Phenylacetic acid catabolic protein M1S30_06935 PF01883 Iron-sulfur cluster assembly protein M1S30_06940 PF00970 Oxidoreductase FAD-binding domain M1S30_06940 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S30_06940 PF00175 Oxidoreductase NAD-binding domain M1S30_06945 PF00378 Enoyl-CoA hydratase/isomerase M1S30_06950 PF00378 Enoyl-CoA hydratase/isomerase M1S30_06955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S30_06955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S30_06955 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S30_06960 PF00108 Thiolase, N-terminal domain M1S30_06960 PF02803 Thiolase, C-terminal domain M1S30_06965 PF00501 AMP-binding enzyme M1S30_06965 PF14535 AMP-binding enzyme C-terminal domain M1S30_06970 PF07848 PaaX-like protein M1S30_06970 PF08223 PaaX-like protein C-terminal domain M1S30_06975 PF00132 Bacterial transferase hexapeptide (six repeats) M1S30_06980 PF03061 Thioesterase superfamily M1S30_07015 PF00199 Catalase M1S30_07020 PF01292 Prokaryotic cytochrome b561 M1S30_07040 PF12697 Alpha/beta hydrolase family M1S30_07045 PF01613 Flavin reductase like domain M1S30_07050 PF00296 Luciferase-like monooxygenase M1S30_07055 PF00171 Aldehyde dehydrogenase family M1S30_07065 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S30_07075 PF00171 Aldehyde dehydrogenase family M1S30_07080 PF02627 Carboxymuconolactone decarboxylase family M1S30_07085 PF03466 LysR substrate binding domain M1S30_07085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_07090 PF02525 Flavodoxin-like fold M1S30_07095 PF01614 Bacterial transcriptional regulator M1S30_07095 PF09339 IclR helix-turn-helix domain M1S30_07100 PF01494 FAD binding domain M1S30_07105 PF00392 Bacterial regulatory proteins, gntR family M1S30_07105 PF07702 UTRA domain M1S30_07115 PF08402 TOBE domain M1S30_07115 PF00005 ABC transporter M1S30_07120 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_07125 PF01266 FAD dependent oxidoreductase M1S30_07130 PF00266 Aminotransferase class-V M1S30_07135 PF13419 Haloacid dehalogenase-like hydrolase M1S30_07140 PF07690 Major Facilitator Superfamily M1S30_07145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_07145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_07145 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_07150 PF02515 CoA-transferase family III M1S30_07155 PF09339 IclR helix-turn-helix domain M1S30_07160 PF00378 Enoyl-CoA hydratase/isomerase M1S30_07165 PF03060 Nitronate monooxygenase M1S30_07170 PF07690 Major Facilitator Superfamily M1S30_07175 PF09339 IclR helix-turn-helix domain M1S30_07180 PF02803 Thiolase, C-terminal domain M1S30_07180 PF00108 Thiolase, N-terminal domain M1S30_07185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S30_07185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S30_07185 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S30_07195 PF00378 Enoyl-CoA hydratase/isomerase M1S30_07200 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_07200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_07200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_07205 PF07690 Major Facilitator Superfamily M1S30_07210 PF01144 Coenzyme A transferase M1S30_07215 PF01144 Coenzyme A transferase M1S30_07225 PF07690 Major Facilitator Superfamily M1S30_07235 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S30_07235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_07235 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_07235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_07250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_07250 PF03466 LysR substrate binding domain M1S30_07255 PF00682 HMGL-like M1S30_07260 PF00289 Biotin carboxylase, N-terminal domain M1S30_07260 PF02785 Biotin carboxylase C-terminal domain M1S30_07260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S30_07260 PF18140 Propionyl-coenzyme A carboxylase BT domain M1S30_07260 PF00364 Biotin-requiring enzyme M1S30_07265 PF00378 Enoyl-CoA hydratase/isomerase M1S30_07270 PF01039 Carboxyl transferase domain M1S30_07275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_07275 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_07275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_07280 PF00440 Bacterial regulatory proteins, tetR family M1S30_07285 PF00501 AMP-binding enzyme M1S30_07285 PF13193 AMP-binding enzyme C-terminal domain M1S30_07310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_07310 PF03466 LysR substrate binding domain M1S30_07345 PF02464 Competence-damaged protein M1S30_07345 PF00994 Probable molybdopterin binding domain M1S30_07345 PF18146 Damage-inducible protein CinA KH domain M1S30_07355 PF00199 Catalase M1S30_07355 PF06628 Catalase-related immune-responsive M1S30_07355 PF18011 C-terminal domain found in long catalases M1S30_07380 PF00717 Peptidase S24-like M1S30_07390 PF01037 Lrp/AsnC ligand binding domain M1S30_07390 PF13404 AsnC-type helix-turn-helix domain M1S30_07400 PF00072 Response regulator receiver domain M1S30_07400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_07400 PF00512 His Kinase A (phospho-acceptor) domain M1S30_07400 PF09308 LuxQ, periplasmic M1S30_07405 PF00072 Response regulator receiver domain M1S30_07420 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_07425 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_07430 PF00005 ABC transporter M1S30_07435 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S30_07440 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S30_07450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_07450 PF03466 LysR substrate binding domain M1S30_07455 PF01810 LysE type translocator M1S30_07465 PF00266 Aminotransferase class-V M1S30_07475 PF00132 Bacterial transferase hexapeptide (six repeats) M1S30_07480 PF00581 Rhodanese-like domain M1S30_07490 PF03466 LysR substrate binding domain M1S30_07490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_07495 PF02798 Glutathione S-transferase, N-terminal domain M1S30_07500 PF14834 Glutathione S-transferase, C-terminal domain M1S30_07500 PF02798 Glutathione S-transferase, N-terminal domain M1S30_07505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_07505 PF03466 LysR substrate binding domain M1S30_07510 PF03788 LrgA family M1S30_07515 PF04172 LrgB-like family M1S30_07520 PF00155 Aminotransferase class I and II M1S30_07520 PF00392 Bacterial regulatory proteins, gntR family M1S30_07535 PF07690 Major Facilitator Superfamily M1S30_07540 PF16957 Malonate decarboxylase, alpha subunit, transporter M1S30_07545 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M1S30_07550 PF06857 Malonate decarboxylase delta subunit (MdcD) M1S30_07555 PF01039 Carboxyl transferase domain M1S30_07565 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M1S30_07570 PF00698 Acyl transferase domain M1S30_07585 PF03466 LysR substrate binding domain M1S30_07585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_07590 PF00392 Bacterial regulatory proteins, gntR family M1S30_07590 PF00155 Aminotransferase class I and II M1S30_07600 PF02322 Cytochrome bd terminal oxidase subunit II M1S30_07605 PF01654 Cytochrome bd terminal oxidase subunit I M1S30_07615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_07615 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_07615 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S30_07620 PF00296 Luciferase-like monooxygenase M1S30_07625 PF00083 Sugar (and other) transporter M1S30_07635 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S30_07640 PF00005 ABC transporter M1S30_07645 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_07650 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M1S30_07655 PF01177 Asp/Glu/Hydantoin racemase M1S30_07660 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S30_07670 PF03466 LysR substrate binding domain M1S30_07670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_07680 PF01979 Amidohydrolase family M1S30_07680 PF13382 Adenine deaminase C-terminal domain M1S30_07690 PF03960 ArsC family M1S30_07695 PF01022 Bacterial regulatory protein, arsR family M1S30_07700 PF01758 Sodium Bile acid symporter family M1S30_07705 PF03466 LysR substrate binding domain M1S30_07705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_07720 PF13192 Thioredoxin domain M1S30_07720 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_07735 PF00132 Bacterial transferase hexapeptide (six repeats) M1S30_07740 PF00588 SpoU rRNA Methylase family M1S30_07745 PF01336 OB-fold nucleic acid binding domain M1S30_07745 PF02811 PHP domain M1S30_07745 PF14579 Helix-hairpin-helix motif M1S30_07745 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S30_07745 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S30_07750 PF17763 Glutaminase/Asparaginase C-terminal domain M1S30_07750 PF00710 Asparaginase, N-terminal M1S30_07755 PF00375 Sodium:dicarboxylate symporter family M1S30_07760 PF00155 Aminotransferase class I and II M1S30_07765 PF01641 SelR domain M1S30_07770 PF00255 Glutathione peroxidase M1S30_07775 PF12833 Helix-turn-helix domain M1S30_07775 PF12852 Cupin M1S30_07785 PF00155 Aminotransferase class I and II M1S30_07790 PF08335 GlnD PII-uridylyltransferase M1S30_07790 PF01966 HD domain M1S30_07790 PF01909 Nucleotidyltransferase domain M1S30_07795 PF02222 ATP-grasp domain M1S30_07805 PF05437 Branched-chain amino acid transport protein (AzlD) M1S30_07810 PF03591 AzlC protein M1S30_07835 PF01926 50S ribosome-binding GTPase M1S30_07835 PF06071 Protein of unknown function (DUF933) M1S30_07840 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_07845 PF00005 ABC transporter M1S30_07845 PF09383 NIL domain M1S30_07850 PF03180 NLPA lipoprotein M1S30_07855 PF03180 NLPA lipoprotein M1S30_07860 PF00296 Luciferase-like monooxygenase M1S30_07870 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S30_07870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_07885 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_07890 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_07895 PF00005 ABC transporter M1S30_07910 PF01037 Lrp/AsnC ligand binding domain M1S30_07915 PF01709 Transcriptional regulator M1S30_07925 PF00440 Bacterial regulatory proteins, tetR family M1S30_07945 PF03466 LysR substrate binding domain M1S30_07945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_07955 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S30_07965 PF00892 EamA-like transporter family M1S30_07985 PF13953 PapC C-terminal domain M1S30_07985 PF00577 Outer membrane usher protein M1S30_07985 PF13954 PapC N-terminal domain M1S30_07990 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S30_07990 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S30_07995 PF16970 Type-1 fimbrial protein, A M1S30_08010 PF04055 Radical SAM superfamily M1S30_08010 PF06968 Biotin and Thiamin Synthesis associated domain M1S30_08015 PF08331 Domain of unknown function (DUF1730) M1S30_08020 PF01256 Carbohydrate kinase M1S30_08020 PF03853 YjeF-related protein N-terminus M1S30_08025 PF02075 Crossover junction endodeoxyribonuclease RuvC M1S30_08040 PF00905 Penicillin binding protein transpeptidase domain M1S30_08060 PF02772 S-adenosylmethionine synthetase, central domain M1S30_08060 PF00438 S-adenosylmethionine synthetase, N-terminal domain M1S30_08060 PF02773 S-adenosylmethionine synthetase, C-terminal domain M1S30_08065 PF02780 Transketolase, C-terminal domain M1S30_08065 PF02779 Transketolase, pyrimidine binding domain M1S30_08065 PF00456 Transketolase, thiamine diphosphate binding domain M1S30_08075 PF04264 YceI-like domain M1S30_08085 PF09992 Phosphodiester glycosidase M1S30_08095 PF05958 tRNA (Uracil-5-)-methyltransferase M1S30_08100 PF04229 GrpB protein M1S30_08105 PF00171 Aldehyde dehydrogenase family M1S30_08105 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M1S30_08105 PF14850 DNA-binding domain of Proline dehydrogenase M1S30_08105 PF01619 Proline dehydrogenase M1S30_08110 PF01037 Lrp/AsnC ligand binding domain M1S30_08115 PF00474 Sodium:solute symporter family M1S30_08120 PF02146 Sir2 family M1S30_08125 PF01597 Glycine cleavage H-protein M1S30_08130 PF12833 Helix-turn-helix domain M1S30_08130 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S30_08140 PF00664 ABC transporter transmembrane region M1S30_08140 PF00005 ABC transporter M1S30_08145 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M1S30_08150 PF06912 Protein of unknown function (DUF1275) M1S30_08155 PF00375 Sodium:dicarboxylate symporter family M1S30_08170 PF08007 Cupin superfamily protein M1S30_08175 PF02545 Maf-like protein M1S30_08185 PF00162 Phosphoglycerate kinase M1S30_08195 PF01116 Fructose-bisphosphate aldolase class-II M1S30_08200 PF00639 PPIC-type PPIASE domain M1S30_08200 PF09312 SurA N-terminal domain M1S30_08205 PF04453 LPS transport system D M1S30_08205 PF03968 OstA-like protein M1S30_08210 PF01636 Phosphotransferase enzyme family M1S30_08215 PF00483 Nucleotidyl transferase M1S30_08220 PF02527 rRNA small subunit methyltransferase G M1S30_08225 PF13614 AAA domain M1S30_08230 PF17762 HTH domain found in ParB protein M1S30_08230 PF02195 ParB-like nuclease domain M1S30_08235 PF01618 MotA/TolQ/ExbB proton channel family M1S30_08245 PF00005 ABC transporter M1S30_08245 PF00664 ABC transporter transmembrane region M1S30_08250 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M1S30_08255 PF02348 Cytidylyltransferase M1S30_08260 PF09115 DNA polymerase III, delta subunit, C terminal M1S30_08270 PF01026 TatD related DNase M1S30_08285 PF07963 Prokaryotic N-terminal methylation motif M1S30_08285 PF02501 Type II secretion system (T2SS), protein I M1S30_08290 PF07963 Prokaryotic N-terminal methylation motif M1S30_08290 PF11612 Type II secretion system (T2SS), protein J M1S30_08295 PF03934 Type II secretion system (T2SS), protein K M1S30_08305 PF03167 Uracil DNA glycosylase superfamily M1S30_08315 PF14437 MafB19-like deaminase M1S30_08325 PF02224 Cytidylate kinase M1S30_08330 PF00575 S1 RNA binding domain M1S30_08335 PF00216 Bacterial DNA-binding protein M1S30_08345 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M1S30_08355 PF00743 Flavin-binding monooxygenase-like M1S30_08365 PF03969 AFG1-like ATPase M1S30_08370 PF02899 Phage integrase, N-terminal SAM-like domain M1S30_08370 PF00589 Phage integrase family M1S30_08460 PF10668 Phage terminase small subunit M1S30_08460 PF03592 Terminase small subunit M1S30_08580 PF01274 Malate synthase M1S30_08590 PF02472 Biopolymer transport protein ExbD/TolR M1S30_08595 PF02472 Biopolymer transport protein ExbD/TolR M1S30_08600 PF01618 MotA/TolQ/ExbB proton channel family M1S30_08610 PF07715 TonB-dependent Receptor Plug Domain M1S30_08610 PF00593 TonB dependent receptor M1S30_08630 PF01432 Peptidase family M3 M1S30_08635 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_08640 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_08645 PF00005 ABC transporter M1S30_08645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S30_08660 PF00459 Inositol monophosphatase family M1S30_08670 PF01649 Ribosomal protein S20 M1S30_08675 PF13460 NAD(P)H-binding M1S30_08680 PF03737 Aldolase/RraA M1S30_08710 PF03461 TRCF domain M1S30_08710 PF00271 Helicase conserved C-terminal domain M1S30_08710 PF17757 UvrB interaction domain M1S30_08710 PF02559 CarD-like/TRCF domain M1S30_08710 PF00270 DEAD/DEAH box helicase M1S30_08720 PF00211 Adenylate and Guanylate cyclase catalytic domain M1S30_08725 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S30_08730 PF00012 Hsp70 protein M1S30_08735 PF00226 DnaJ domain M1S30_08735 PF07743 HSCB C-terminal oligomerisation domain M1S30_08740 PF01521 Iron-sulphur cluster biosynthesis M1S30_08745 PF01592 NifU-like N terminal domain M1S30_08750 PF00266 Aminotransferase class-V M1S30_08755 PF02082 Transcriptional regulator M1S30_08770 PF00216 Bacterial DNA-binding protein M1S30_08775 PF00639 PPIC-type PPIASE domain M1S30_08775 PF09312 SurA N-terminal domain M1S30_08780 PF12833 Helix-turn-helix domain M1S30_08780 PF12852 Cupin M1S30_08785 PF00487 Fatty acid desaturase M1S30_08790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_08790 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_08790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_08795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_08795 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_08795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_08800 PF03109 ABC1 family M1S30_08810 PF04073 Aminoacyl-tRNA editing domain M1S30_08815 PF06276 Ferric iron reductase FhuF-like transporter M1S30_08815 PF04183 IucA / IucC family M1S30_08820 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S30_08825 PF07690 Major Facilitator Superfamily M1S30_08830 PF06276 Ferric iron reductase FhuF-like transporter M1S30_08830 PF04183 IucA / IucC family M1S30_08835 PF06276 Ferric iron reductase FhuF-like transporter M1S30_08835 PF04183 IucA / IucC family M1S30_08850 PF07715 TonB-dependent Receptor Plug Domain M1S30_08850 PF00593 TonB dependent receptor M1S30_08875 PF13419 Haloacid dehalogenase-like hydrolase M1S30_08885 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M1S30_08890 PF02277 Phosphoribosyltransferase M1S30_08905 PF02654 Cobalamin-5-phosphate synthase M1S30_08910 PF00793 DAHP synthetase I family M1S30_08915 PF01925 Sulfite exporter TauE/SafE M1S30_08935 PF07715 TonB-dependent Receptor Plug Domain M1S30_08935 PF00593 TonB dependent receptor M1S30_08940 PF02684 Lipid-A-disaccharide synthetase M1S30_08950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S30_08955 PF00005 ABC transporter M1S30_08990 PF01230 HIT domain M1S30_09020 PF08241 Methyltransferase domain M1S30_09025 PF00561 alpha/beta hydrolase fold M1S30_09030 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S30_09040 PF02575 YbaB/EbfC DNA-binding family M1S30_09045 PF02132 RecR protein M1S30_09045 PF13662 Toprim domain M1S30_09050 PF01612 3'-5' exonuclease M1S30_09050 PF00570 HRDC domain M1S30_09070 PF05166 YcgL domain M1S30_09080 PF00004 ATPase family associated with various cellular activities (AAA) M1S30_09080 PF17862 AAA+ lid domain M1S30_09080 PF01434 Peptidase family M41 M1S30_09090 PF00291 Pyridoxal-phosphate dependent enzyme M1S30_09095 PF05175 Methyltransferase small domain M1S30_09100 PF01264 Chorismate synthase M1S30_09105 PF00990 Diguanylate cyclase, GGDEF domain M1S30_09105 PF08448 PAS fold M1S30_09120 PF04055 Radical SAM superfamily M1S30_09125 PF00676 Dehydrogenase E1 component M1S30_09130 PF02780 Transketolase, C-terminal domain M1S30_09130 PF02779 Transketolase, pyrimidine binding domain M1S30_09135 PF00364 Biotin-requiring enzyme M1S30_09135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S30_09135 PF02817 e3 binding domain M1S30_09140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S30_09140 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_09145 PF00106 short chain dehydrogenase M1S30_09150 PF08240 Alcohol dehydrogenase GroES-like domain M1S30_09150 PF00107 Zinc-binding dehydrogenase M1S30_09155 PF01062 Bestrophin, RFP-TM, chloride channel M1S30_09160 PF02954 Bacterial regulatory protein, Fis family M1S30_09160 PF00072 Response regulator receiver domain M1S30_09160 PF00158 Sigma-54 interaction domain M1S30_09165 PF04273 Putative phosphatase (DUF442) M1S30_09165 PF00753 Metallo-beta-lactamase superfamily M1S30_09180 PF01925 Sulfite exporter TauE/SafE M1S30_09195 PF12833 Helix-turn-helix domain M1S30_09195 PF06445 GyrI-like small molecule binding domain M1S30_09200 PF01638 HxlR-like helix-turn-helix M1S30_09205 PF02525 Flavodoxin-like fold M1S30_09215 PF07702 UTRA domain M1S30_09215 PF00392 Bacterial regulatory proteins, gntR family M1S30_09230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S30_09235 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_09240 PF00005 ABC transporter M1S30_09255 PF00083 Sugar (and other) transporter M1S30_09260 PF00593 TonB dependent receptor M1S30_09260 PF07715 TonB-dependent Receptor Plug Domain M1S30_09265 PF00206 Lyase M1S30_09265 PF10415 Fumarase C C-terminus M1S30_09280 PF03466 LysR substrate binding domain M1S30_09280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_09285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_09285 PF03466 LysR substrate binding domain M1S30_09295 PF00108 Thiolase, N-terminal domain M1S30_09295 PF02803 Thiolase, C-terminal domain M1S30_09300 PF02667 Short chain fatty acid transporter M1S30_09305 PF01144 Coenzyme A transferase M1S30_09310 PF01144 Coenzyme A transferase M1S30_09315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_09315 PF03466 LysR substrate binding domain M1S30_09340 PF06719 AraC-type transcriptional regulator N-terminus M1S30_09340 PF12833 Helix-turn-helix domain M1S30_09345 PF07690 Major Facilitator Superfamily M1S30_09350 PF01738 Dienelactone hydrolase family M1S30_09365 PF01613 Flavin reductase like domain M1S30_09375 PF12833 Helix-turn-helix domain M1S30_09375 PF14525 AraC-binding-like domain M1S30_09380 PF00970 Oxidoreductase FAD-binding domain M1S30_09380 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S30_09380 PF00175 Oxidoreductase NAD-binding domain M1S30_09385 PF00866 Ring hydroxylating beta subunit M1S30_09390 PF00355 Rieske [2Fe-2S] domain M1S30_09390 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S30_09395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_09395 PF03459 TOBE domain M1S30_09405 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_09410 PF00005 ABC transporter M1S30_09410 PF03459 TOBE domain M1S30_09415 PF00106 short chain dehydrogenase M1S30_09420 PF00550 Phosphopantetheine attachment site M1S30_09420 PF00857 Isochorismatase family M1S30_09430 PF00149 Calcineurin-like phosphoesterase M1S30_09435 PF13089 Polyphosphate kinase N-terminal domain M1S30_09435 PF17941 Polyphosphate kinase C-terminal domain 1 M1S30_09435 PF13090 Polyphosphate kinase C-terminal domain 2 M1S30_09435 PF02503 Polyphosphate kinase middle domain M1S30_09440 PF08042 PqqA family M1S30_09445 PF12706 Beta-lactamase superfamily domain M1S30_09450 PF03070 TENA/THI-4/PQQC family M1S30_09455 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M1S30_09460 PF13186 Iron-sulfur cluster-binding domain M1S30_09460 PF04055 Radical SAM superfamily M1S30_09465 PF01244 Membrane dipeptidase (Peptidase family M19) M1S30_09480 PF13091 PLD-like domain M1S30_09495 PF00199 Catalase M1S30_09505 PF08240 Alcohol dehydrogenase GroES-like domain M1S30_09505 PF00107 Zinc-binding dehydrogenase M1S30_09515 PF00419 Fimbrial protein M1S30_09520 PF13953 PapC C-terminal domain M1S30_09520 PF00577 Outer membrane usher protein M1S30_09520 PF13954 PapC N-terminal domain M1S30_09525 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S30_09525 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S30_09535 PF16970 Type-1 fimbrial protein, A M1S30_09555 PF01266 FAD dependent oxidoreductase M1S30_09570 PF01593 Flavin containing amine oxidoreductase M1S30_09575 PF00743 Flavin-binding monooxygenase-like M1S30_09580 PF12146 Serine aminopeptidase, S33 M1S30_09585 PF02321 Outer membrane efflux protein M1S30_09590 PF00873 AcrB/AcrD/AcrF family M1S30_09595 PF00529 HlyD membrane-fusion protein of T1SS M1S30_09595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S30_09600 PF00072 Response regulator receiver domain M1S30_09600 PF00486 Transcriptional regulatory protein, C terminal M1S30_09605 PF00512 His Kinase A (phospho-acceptor) domain M1S30_09605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_09605 PF16527 Two-component sensor protein CpxA, periplasmic domain M1S30_09605 PF00672 HAMP domain M1S30_09620 PF02311 AraC-like ligand binding domain M1S30_09620 PF12833 Helix-turn-helix domain M1S30_09625 PF12146 Serine aminopeptidase, S33 M1S30_09675 PF02824 TGS domain M1S30_09675 PF13291 ACT domain M1S30_09675 PF04607 Region found in RelA / SpoT proteins M1S30_09685 PF01975 Survival protein SurE M1S30_09710 PF07690 Major Facilitator Superfamily M1S30_09715 PF13533 Biotin-lipoyl like M1S30_09720 PF01425 Amidase M1S30_09725 PF00196 Bacterial regulatory proteins, luxR family M1S30_09800 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S30_09805 PF14572 Phosphoribosyl synthetase-associated domain M1S30_09805 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S30_09825 PF00005 ABC transporter M1S30_09830 PF01032 FecCD transport family M1S30_09840 PF00107 Zinc-binding dehydrogenase M1S30_09840 PF08240 Alcohol dehydrogenase GroES-like domain M1S30_09855 PF12833 Helix-turn-helix domain M1S30_09855 PF06719 AraC-type transcriptional regulator N-terminus M1S30_09860 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S30_09860 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S30_09865 PF07690 Major Facilitator Superfamily M1S30_09870 PF01370 NAD dependent epimerase/dehydratase family M1S30_09875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_09875 PF03466 LysR substrate binding domain M1S30_09885 PF00920 Dehydratase family M1S30_09890 PF00171 Aldehyde dehydrogenase family M1S30_09905 PF00529 HlyD membrane-fusion protein of T1SS M1S30_09905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S30_09940 PF03737 Aldolase/RraA M1S30_09945 PF01842 ACT domain M1S30_09945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S30_09945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S30_09950 PF07690 Major Facilitator Superfamily M1S30_09970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_09970 PF03466 LysR substrate binding domain M1S30_09980 PF08450 SMP-30/Gluconolactonase/LRE-like region M1S30_09985 PF00392 Bacterial regulatory proteins, gntR family M1S30_09985 PF07702 UTRA domain M1S30_09995 PF04909 Amidohydrolase M1S30_10000 PF07690 Major Facilitator Superfamily M1S30_10015 PF05860 haemagglutination activity domain M1S30_10015 PF13018 Extended Signal Peptide of Type V secretion system M1S30_10015 PF13332 Hemagglutinin repeat M1S30_10015 PF04829 Pre-toxin domain with VENN motif M1S30_10020 PF17287 POTRA domain M1S30_10020 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M1S30_10020 PF08479 POTRA domain, ShlB-type M1S30_10030 PF01546 Peptidase family M20/M25/M40 M1S30_10030 PF07687 Peptidase dimerisation domain M1S30_10040 PF00999 Sodium/hydrogen exchanger family M1S30_10040 PF02254 TrkA-N domain M1S30_10045 PF07995 Glucose / Sorbosone dehydrogenase M1S30_10050 PF03466 LysR substrate binding domain M1S30_10050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_10055 PF00857 Isochorismatase family M1S30_10065 PF00440 Bacterial regulatory proteins, tetR family M1S30_10065 PF08359 YsiA-like protein, C-terminal region M1S30_10070 PF12706 Beta-lactamase superfamily domain M1S30_10080 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_10090 PF00376 MerR family regulatory protein M1S30_10090 PF09278 MerR, DNA binding M1S30_10095 PF01872 RibD C-terminal domain M1S30_10100 PF00106 short chain dehydrogenase M1S30_10105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S30_10105 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_10110 PF01047 MarR family M1S30_10115 PF07859 alpha/beta hydrolase fold M1S30_10130 PF06628 Catalase-related immune-responsive M1S30_10130 PF00199 Catalase M1S30_10135 PF00561 alpha/beta hydrolase fold M1S30_10145 PF00171 Aldehyde dehydrogenase family M1S30_10150 PF08240 Alcohol dehydrogenase GroES-like domain M1S30_10150 PF00107 Zinc-binding dehydrogenase M1S30_10155 PF00474 Sodium:solute symporter family M1S30_10160 PF04341 Protein of unknown function, DUF485 M1S30_10165 PF00501 AMP-binding enzyme M1S30_10165 PF13193 AMP-binding enzyme C-terminal domain M1S30_10170 PF02954 Bacterial regulatory protein, Fis family M1S30_10170 PF06506 Propionate catabolism activator M1S30_10170 PF00158 Sigma-54 interaction domain M1S30_10180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_10180 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_10180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_10200 PF00171 Aldehyde dehydrogenase family M1S30_10210 PF07690 Major Facilitator Superfamily M1S30_10215 PF00920 Dehydratase family M1S30_10220 PF07729 FCD domain M1S30_10220 PF00392 Bacterial regulatory proteins, gntR family M1S30_10230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_10230 PF03466 LysR substrate binding domain M1S30_10235 PF13378 Enolase C-terminal domain-like M1S30_10235 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S30_10240 PF02426 Muconolactone delta-isomerase M1S30_10245 PF00775 Dioxygenase M1S30_10245 PF04444 Catechol dioxygenase N terminus M1S30_10250 PF01144 Coenzyme A transferase M1S30_10255 PF01144 Coenzyme A transferase M1S30_10260 PF00108 Thiolase, N-terminal domain M1S30_10260 PF02803 Thiolase, C-terminal domain M1S30_10265 PF12146 Serine aminopeptidase, S33 M1S30_10270 PF01804 Penicillin amidase M1S30_10275 PF00171 Aldehyde dehydrogenase family M1S30_10285 PF01179 Copper amine oxidase, enzyme domain M1S30_10285 PF07833 Copper amine oxidase N-terminal domain M1S30_10285 PF02728 Copper amine oxidase, N3 domain M1S30_10285 PF02727 Copper amine oxidase, N2 domain M1S30_10290 PF02311 AraC-like ligand binding domain M1S30_10290 PF12833 Helix-turn-helix domain M1S30_10295 PF01613 Flavin reductase like domain M1S30_10300 PF00175 Oxidoreductase NAD-binding domain M1S30_10300 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S30_10315 PF00355 Rieske [2Fe-2S] domain M1S30_10315 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S30_10330 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S30_10335 PF01425 Amidase M1S30_10345 PF07690 Major Facilitator Superfamily M1S30_10355 PF00106 short chain dehydrogenase M1S30_10370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_10370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_10370 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_10375 PF03466 LysR substrate binding domain M1S30_10375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_10380 PF01614 Bacterial transcriptional regulator M1S30_10380 PF09339 IclR helix-turn-helix domain M1S30_10385 PF00753 Metallo-beta-lactamase superfamily M1S30_10395 PF04143 Sulphur transport M1S30_10405 PF01011 PQQ enzyme repeat M1S30_10405 PF13360 PQQ-like domain M1S30_10410 PF04966 Carbohydrate-selective porin, OprB family M1S30_10415 PF05048 Periplasmic copper-binding protein (NosD) M1S30_10420 PF01487 Type I 3-dehydroquinase M1S30_10425 PF00775 Dioxygenase M1S30_10430 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M1S30_10430 PF00775 Dioxygenase M1S30_10435 PF02627 Carboxymuconolactone decarboxylase family M1S30_10440 PF07690 Major Facilitator Superfamily M1S30_10445 PF00561 alpha/beta hydrolase fold M1S30_10450 PF00206 Lyase M1S30_10450 PF10397 Adenylosuccinate lyase C-terminus M1S30_10455 PF00108 Thiolase, N-terminal domain M1S30_10455 PF02803 Thiolase, C-terminal domain M1S30_10460 PF01144 Coenzyme A transferase M1S30_10470 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M1S30_10475 PF04977 Septum formation initiator M1S30_10480 PF04239 Protein of unknown function (DUF421) M1S30_10485 PF00113 Enolase, C-terminal TIM barrel domain M1S30_10485 PF03952 Enolase, N-terminal domain M1S30_10490 PF00793 DAHP synthetase I family M1S30_10495 PF06418 CTP synthase N-terminus M1S30_10495 PF00117 Glutamine amidotransferase class-I M1S30_10525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S30_10525 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_10540 PF00793 DAHP synthetase I family M1S30_10545 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M1S30_10550 PF10431 C-terminal, D2-small domain, of ClpB protein M1S30_10550 PF00004 ATPase family associated with various cellular activities (AAA) M1S30_10550 PF07724 AAA domain (Cdc48 subfamily) M1S30_10550 PF17871 AAA lid domain M1S30_10550 PF02861 Clp amino terminal domain, pathogenicity island component M1S30_10555 PF02617 ATP-dependent Clp protease adaptor protein ClpS M1S30_10565 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S30_10565 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S30_10580 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M1S30_10585 PF00585 C-terminal regulatory domain of Threonine dehydratase M1S30_10585 PF00291 Pyridoxal-phosphate dependent enzyme M1S30_10590 PF02254 TrkA-N domain M1S30_10590 PF02080 TrkA-C domain M1S30_10595 PF02386 Cation transport protein M1S30_10600 PF02253 Phospholipase A1 M1S30_10605 PF05193 Peptidase M16 inactive domain M1S30_10605 PF08367 Peptidase M16C associated M1S30_10605 PF00675 Insulinase (Peptidase family M16) M1S30_10610 PF07715 TonB-dependent Receptor Plug Domain M1S30_10610 PF00593 TonB dependent receptor M1S30_10615 PF00294 pfkB family carbohydrate kinase M1S30_10625 PF07290 Protein of unknown function (DUF1449) M1S30_10635 PF01654 Cytochrome bd terminal oxidase subunit I M1S30_10640 PF02322 Cytochrome bd terminal oxidase subunit II M1S30_10645 PF08173 Membrane bound YbgT-like protein M1S30_10660 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M1S30_10670 PF02881 SRP54-type protein, helical bundle domain M1S30_10670 PF00448 SRP54-type protein, GTPase domain M1S30_10695 PF00571 CBS domain M1S30_10695 PF00478 IMP dehydrogenase / GMP reductase domain M1S30_10700 PF00202 Aminotransferase class-III M1S30_10705 PF00462 Glutaredoxin M1S30_10715 PF03466 LysR substrate binding domain M1S30_10715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_10720 PF00557 Metallopeptidase family M24 M1S30_10725 PF05525 Branched-chain amino acid transport protein M1S30_10750 PF00381 PTS HPr component phosphorylation site M1S30_10750 PF02896 PEP-utilising enzyme, TIM barrel domain M1S30_10750 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M1S30_10750 PF05524 PEP-utilising enzyme, N-terminal M1S30_10750 PF00391 PEP-utilising enzyme, mobile domain M1S30_10755 PF00294 pfkB family carbohydrate kinase M1S30_10760 PF02378 Phosphotransferase system, EIIC M1S30_10760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M1S30_10790 PF07995 Glucose / Sorbosone dehydrogenase M1S30_10795 PF02586 SOS response associated peptidase (SRAP) M1S30_10800 PF00916 Sulfate permease family M1S30_10800 PF01740 STAS domain M1S30_10805 PF00082 Subtilase family M1S30_10805 PF05922 Peptidase inhibitor I9 M1S30_10820 PF00324 Amino acid permease M1S30_10825 PF00266 Aminotransferase class-V M1S30_10830 PF01037 Lrp/AsnC ligand binding domain M1S30_10855 PF13419 Haloacid dehalogenase-like hydrolase M1S30_10860 PF01479 S4 domain M1S30_10865 PF00154 recA bacterial DNA recombination protein M1S30_10870 PF02631 RecX family M1S30_10885 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M1S30_10885 PF00132 Bacterial transferase hexapeptide (six repeats) M1S30_10890 PF07977 FabA-like domain M1S30_10895 PF00132 Bacterial transferase hexapeptide (six repeats) M1S30_10895 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M1S30_10905 PF07244 Surface antigen variable number repeat M1S30_10905 PF01103 Surface antigen M1S30_10910 PF13180 PDZ domain M1S30_10910 PF17820 PDZ domain M1S30_10910 PF02163 Peptidase family M50 M1S30_10915 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M1S30_10915 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M1S30_10915 PF13288 DXP reductoisomerase C-terminal domain M1S30_10925 PF01255 Putative undecaprenyl diphosphate synthase M1S30_10930 PF01765 Ribosome recycling factor M1S30_10935 PF00696 Amino acid kinase family M1S30_10940 PF18693 TRAM domain M1S30_10940 PF04055 Radical SAM superfamily M1S30_10940 PF00919 Uncharacterized protein family UPF0004 M1S30_10945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_10945 PF00512 His Kinase A (phospho-acceptor) domain M1S30_10945 PF00989 PAS fold M1S30_10950 PF02954 Bacterial regulatory protein, Fis family M1S30_10950 PF00072 Response regulator receiver domain M1S30_10950 PF00158 Sigma-54 interaction domain M1S30_10970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S30_10970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S30_10980 PF02542 YgbB family M1S30_10990 PF01266 FAD dependent oxidoreductase M1S30_11010 PF10415 Fumarase C C-terminus M1S30_11010 PF00206 Lyase M1S30_11015 PF16363 GDP-mannose 4,6 dehydratase M1S30_11020 PF02635 DsrE/DsrF-like family M1S30_11040 PF00892 EamA-like transporter family M1S30_11045 PF00392 Bacterial regulatory proteins, gntR family M1S30_11045 PF00155 Aminotransferase class I and II M1S30_11050 PF01638 HxlR-like helix-turn-helix M1S30_11055 PF03453 MoeA N-terminal region (domain I and II) M1S30_11055 PF00994 Probable molybdopterin binding domain M1S30_11055 PF03454 MoeA C-terminal region (domain IV) M1S30_11060 PF00994 Probable molybdopterin binding domain M1S30_11060 PF01967 MoaC family M1S30_11065 PF02391 MoaE protein M1S30_11075 PF06463 Molybdenum Cofactor Synthesis C M1S30_11075 PF04055 Radical SAM superfamily M1S30_11080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S30_11080 PF00384 Molybdopterin oxidoreductase M1S30_11080 PF01568 Molydopterin dinucleotide binding domain M1S30_11085 PF12804 MobA-like NTP transferase domain M1S30_11090 PF04324 BFD-like [2Fe-2S] binding domain M1S30_11090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S30_11090 PF00384 Molybdopterin oxidoreductase M1S30_11090 PF01568 Molydopterin dinucleotide binding domain M1S30_11095 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_11095 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S30_11095 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S30_11095 PF04324 BFD-like [2Fe-2S] binding domain M1S30_11095 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S30_11100 PF13806 Rieske-like [2Fe-2S] domain M1S30_11100 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S30_11100 PF04324 BFD-like [2Fe-2S] binding domain M1S30_11100 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S30_11100 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S30_11100 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_11110 PF00486 Transcriptional regulatory protein, C terminal M1S30_11110 PF00072 Response regulator receiver domain M1S30_11115 PF00005 ABC transporter M1S30_11125 PF13438 Domain of unknown function (DUF4113) M1S30_11125 PF00817 impB/mucB/samB family M1S30_11125 PF11799 impB/mucB/samB family C-terminal domain M1S30_11130 PF01220 Dehydroquinase class II M1S30_11135 PF00364 Biotin-requiring enzyme M1S30_11140 PF00289 Biotin carboxylase, N-terminal domain M1S30_11140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S30_11140 PF02785 Biotin carboxylase C-terminal domain M1S30_11150 PF12832 MFS_1 like family M1S30_11220 PF10145 Phage-related minor tail protein M1S30_11220 PF01551 Peptidase family M23 M1S30_11220 PF01464 Transglycosylase SLT domain M1S30_11240 PF03869 Arc-like DNA binding domain M1S30_11425 PF01555 DNA methylase M1S30_11455 PF02384 N-6 DNA Methylase M1S30_11455 PF12161 HsdM N-terminal domain M1S30_11525 PF01645 Conserved region in glutamate synthase M1S30_11540 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M1S30_11540 PF01565 FAD binding domain M1S30_11545 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S30_11555 PF00465 Iron-containing alcohol dehydrogenase M1S30_11560 PF03061 Thioesterase superfamily M1S30_11565 PF04185 Phosphoesterase family M1S30_11565 PF05506 Domain of unknown function (DUF756) M1S30_11570 PF12170 DNA polymerase III tau subunit V interacting with alpha M1S30_11570 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M1S30_11570 PF12169 DNA polymerase III subunits gamma and tau domain III M1S30_11575 PF07690 Major Facilitator Superfamily M1S30_11585 PF00144 Beta-lactamase M1S30_11590 PF01575 MaoC like domain M1S30_11600 PF00108 Thiolase, N-terminal domain M1S30_11600 PF02803 Thiolase, C-terminal domain M1S30_11610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_11610 PF03466 LysR substrate binding domain M1S30_11615 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1S30_11620 PF01810 LysE type translocator M1S30_11625 PF01037 Lrp/AsnC ligand binding domain M1S30_11630 PF03594 Benzoate membrane transport protein M1S30_11635 PF02308 MgtC family M1S30_11640 PF00689 Cation transporting ATPase, C-terminus M1S30_11640 PF00690 Cation transporter/ATPase, N-terminus M1S30_11665 PF00582 Universal stress protein family M1S30_11670 PF12848 ABC transporter M1S30_11670 PF00005 ABC transporter M1S30_11690 PF00593 TonB dependent receptor M1S30_11690 PF07715 TonB-dependent Receptor Plug Domain M1S30_11725 PF00924 Mechanosensitive ion channel M1S30_11730 PF00593 TonB dependent receptor M1S30_11730 PF07715 TonB-dependent Receptor Plug Domain M1S30_11735 PF00440 Bacterial regulatory proteins, tetR family M1S30_11750 PF01037 Lrp/AsnC ligand binding domain M1S30_11755 PF01817 Chorismate mutase type II M1S30_11765 PF00106 short chain dehydrogenase M1S30_11775 PF11940 Domain of unknown function (DUF3458) Ig-like fold M1S30_11775 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M1S30_11775 PF01433 Peptidase family M1 domain M1S30_11790 PF02110 Hydroxyethylthiazole kinase family M1S30_11795 PF06445 GyrI-like small molecule binding domain M1S30_11805 PF05970 PIF1-like helicase M1S30_11805 PF14493 Helix-turn-helix domain M1S30_11810 PF00465 Iron-containing alcohol dehydrogenase M1S30_11825 PF00171 Aldehyde dehydrogenase family M1S30_11830 PF13520 Amino acid permease M1S30_11835 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M1S30_11840 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M1S30_11845 PF00117 Glutamine amidotransferase class-I M1S30_11845 PF00958 GMP synthase C terminal domain M1S30_11845 PF02540 NAD synthase M1S30_11850 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S30_11850 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M1S30_11855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S30_11860 PF00149 Calcineurin-like phosphoesterase M1S30_11870 PF00881 Nitroreductase family M1S30_11880 PF17209 Hfq protein M1S30_11890 PF01119 DNA mismatch repair protein, C-terminal domain M1S30_11890 PF08676 MutL C terminal dimerisation domain M1S30_11895 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M1S30_11900 PF01479 S4 domain M1S30_11900 PF00849 RNA pseudouridylate synthase M1S30_11915 PF01479 S4 domain M1S30_11915 PF00849 RNA pseudouridylate synthase M1S30_11925 PF04284 Protein of unknown function (DUF441) M1S30_11930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_11930 PF03466 LysR substrate binding domain M1S30_11945 PF07690 Major Facilitator Superfamily M1S30_11950 PF00027 Cyclic nucleotide-binding domain M1S30_11950 PF00520 Ion transport protein M1S30_11960 PF06434 Aconitate hydratase 2 N-terminus M1S30_11960 PF00330 Aconitase family (aconitate hydratase) M1S30_11960 PF11791 Aconitate B N-terminal domain M1S30_11975 PF01103 Surface antigen M1S30_11975 PF07244 Surface antigen variable number repeat M1S30_11975 PF17243 POTRA domain TamA domain 1 M1S30_11980 PF07690 Major Facilitator Superfamily M1S30_11985 PF03232 Ubiquinone biosynthesis protein COQ7 M1S30_11995 PF00120 Glutamine synthetase, catalytic domain M1S30_12000 PF00072 Response regulator receiver domain M1S30_12000 PF00486 Transcriptional regulatory protein, C terminal M1S30_12005 PF13493 Domain of unknown function (DUF4118) M1S30_12005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_12005 PF00512 His Kinase A (phospho-acceptor) domain M1S30_12005 PF02702 Osmosensitive K+ channel His kinase sensor domain M1S30_12010 PF02669 K+-transporting ATPase, c chain M1S30_12020 PF03814 Potassium-transporting ATPase A subunit M1S30_12035 PF03109 ABC1 family M1S30_12040 PF00899 ThiF family M1S30_12045 PF01613 Flavin reductase like domain M1S30_12050 PF00501 AMP-binding enzyme M1S30_12050 PF13193 AMP-binding enzyme C-terminal domain M1S30_12055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_12055 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_12055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_12060 PF00106 short chain dehydrogenase M1S30_12065 PF12833 Helix-turn-helix domain M1S30_12070 PF09084 NMT1/THI5 like M1S30_12075 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_12080 PF17827 PrmC N-terminal domain M1S30_12080 PF13847 Methyltransferase domain M1S30_12085 PF03462 PCRF domain M1S30_12085 PF00472 RF-1 domain M1S30_12095 PF03466 LysR substrate binding domain M1S30_12095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_12110 PF00296 Luciferase-like monooxygenase M1S30_12120 PF13994 PgaD-like protein M1S30_12125 PF00535 Glycosyl transferase family 2 M1S30_12130 PF01522 Polysaccharide deacetylase M1S30_12130 PF14883 Hypothetical glycosyl hydrolase family 13 M1S30_12140 PF03618 Kinase/pyrophosphorylase M1S30_12145 PF02896 PEP-utilising enzyme, TIM barrel domain M1S30_12145 PF00391 PEP-utilising enzyme, mobile domain M1S30_12145 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M1S30_12155 PF06481 COX Aromatic Rich Motif M1S30_12155 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M1S30_12160 PF00115 Cytochrome C and Quinol oxidase polypeptide I M1S30_12165 PF00510 Cytochrome c oxidase subunit III M1S30_12170 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M1S30_12175 PF01040 UbiA prenyltransferase family M1S30_12180 PF01250 Ribosomal protein S6 M1S30_12185 PF01084 Ribosomal protein S18 M1S30_12190 PF03948 Ribosomal protein L9, C-terminal domain M1S30_12190 PF01281 Ribosomal protein L9, N-terminal domain M1S30_12195 PF00772 DnaB-like helicase N terminal domain M1S30_12195 PF03796 DnaB-like helicase C terminal domain M1S30_12200 PF00842 Alanine racemase, C-terminal domain M1S30_12200 PF01168 Alanine racemase, N-terminal domain M1S30_12210 PF01841 Transglutaminase-like superfamily M1S30_12210 PF08379 Bacterial transglutaminase-like N-terminal region M1S30_12220 PF14403 Circularly permuted ATP-grasp type 2 M1S30_12230 PF13932 GidA associated domain M1S30_12230 PF01134 Glucose inhibited division protein A M1S30_12250 PF02954 Bacterial regulatory protein, Fis family M1S30_12255 PF01808 AICARFT/IMPCHase bienzyme M1S30_12255 PF02142 MGS-like domain M1S30_12260 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M1S30_12260 PF02843 Phosphoribosylglycinamide synthetase, C domain M1S30_12260 PF02844 Phosphoribosylglycinamide synthetase, N domain M1S30_12265 PF03180 NLPA lipoprotein M1S30_12270 PF00005 ABC transporter M1S30_12270 PF09383 NIL domain M1S30_12275 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_12280 PF16123 Hydroxyacylglutathione hydrolase C-terminus M1S30_12280 PF00753 Metallo-beta-lactamase superfamily M1S30_12290 PF00375 Sodium:dicarboxylate symporter family M1S30_12305 PF13610 DDE domain M1S30_12320 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S30_12320 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S30_12340 PF07690 Major Facilitator Superfamily M1S30_12355 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S30_12360 PF00563 EAL domain M1S30_12360 PF00990 Diguanylate cyclase, GGDEF domain M1S30_12360 PF03707 Bacterial signalling protein N terminal repeat M1S30_12365 PF00892 EamA-like transporter family M1S30_12370 PF01037 Lrp/AsnC ligand binding domain M1S30_12375 PF01624 MutS domain I M1S30_12375 PF05188 MutS domain II M1S30_12375 PF05192 MutS domain III M1S30_12375 PF05190 MutS family domain IV M1S30_12375 PF00488 MutS domain V M1S30_12385 PF11953 Domain of unknown function (DUF3470) M1S30_12385 PF00037 4Fe-4S binding domain M1S30_12395 PF01596 O-methyltransferase M1S30_12405 PF00132 Bacterial transferase hexapeptide (six repeats) M1S30_12410 PF01205 Uncharacterized protein family UPF0029 M1S30_12420 PF00664 ABC transporter transmembrane region M1S30_12420 PF00005 ABC transporter M1S30_12420 PF03412 Peptidase C39 family M1S30_12425 PF02321 Outer membrane efflux protein M1S30_12430 PF00005 ABC transporter M1S30_12430 PF12399 Branched-chain amino acid ATP-binding cassette transporter M1S30_12435 PF03968 OstA-like protein M1S30_12450 PF01380 SIS domain M1S30_12450 PF00571 CBS domain M1S30_12455 PF01406 tRNA synthetases class I (C) catalytic domain M1S30_12455 PF09190 DALR domain M1S30_12480 PF01638 HxlR-like helix-turn-helix M1S30_12485 PF07690 Major Facilitator Superfamily M1S30_12510 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S30_12510 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S30_12520 PF00313 'Cold-shock' DNA-binding domain M1S30_12525 PF01810 LysE type translocator M1S30_12555 PF13742 OB-fold nucleic acid binding domain M1S30_12555 PF02601 Exonuclease VII, large subunit M1S30_12590 PF09278 MerR, DNA binding M1S30_12590 PF00376 MerR family regulatory protein M1S30_12595 PF00403 Heavy-metal-associated domain M1S30_12600 PF00403 Heavy-metal-associated domain M1S30_12605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_12605 PF03466 LysR substrate binding domain M1S30_12615 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S30_12615 PF00355 Rieske [2Fe-2S] domain M1S30_12620 PF00866 Ring hydroxylating beta subunit M1S30_12625 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S30_12625 PF00175 Oxidoreductase NAD-binding domain M1S30_12625 PF00970 Oxidoreductase FAD-binding domain M1S30_12630 PF00106 short chain dehydrogenase M1S30_12635 PF03594 Benzoate membrane transport protein M1S30_12640 PF07690 Major Facilitator Superfamily M1S30_12650 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M1S30_12650 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M1S30_12655 PF00270 DEAD/DEAH box helicase M1S30_12655 PF11898 Domain of unknown function (DUF3418) M1S30_12655 PF04408 Helicase associated domain (HA2) M1S30_12655 PF00271 Helicase conserved C-terminal domain M1S30_12655 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M1S30_12660 PF00578 AhpC/TSA family M1S30_12660 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S30_12690 PF00043 Glutathione S-transferase, C-terminal domain M1S30_12690 PF02798 Glutathione S-transferase, N-terminal domain M1S30_12700 PF02390 Putative methyltransferase M1S30_12705 PF13417 Glutathione S-transferase, N-terminal domain M1S30_12705 PF00043 Glutathione S-transferase, C-terminal domain M1S30_12715 PF13488 Glycine zipper M1S30_12715 PF00691 OmpA family M1S30_12720 PF01979 Amidohydrolase family M1S30_12725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S30_12725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S30_12735 PF10672 S-adenosylmethionine-dependent methyltransferase M1S30_12735 PF02926 THUMP domain M1S30_12735 PF01170 Putative RNA methylase family UPF0020 M1S30_12750 PF00004 ATPase family associated with various cellular activities (AAA) M1S30_12750 PF02861 Clp amino terminal domain, pathogenicity island component M1S30_12750 PF10431 C-terminal, D2-small domain, of ClpB protein M1S30_12750 PF17871 AAA lid domain M1S30_12750 PF07724 AAA domain (Cdc48 subfamily) M1S30_12765 PF02566 OsmC-like protein M1S30_12775 PF00027 Cyclic nucleotide-binding domain M1S30_12775 PF13545 Crp-like helix-turn-helix domain M1S30_12785 PF00248 Aldo/keto reductase family M1S30_12800 PF00709 Adenylosuccinate synthetase M1S30_12805 PF13393 Histidyl-tRNA synthetase M1S30_12810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S30_12810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S30_12815 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S30_12815 PF02272 DHHA1 domain M1S30_12815 PF01411 tRNA synthetases class II (A) M1S30_12820 PF13840 ACT domain M1S30_12820 PF01842 ACT domain M1S30_12820 PF00696 Amino acid kinase family M1S30_12825 PF02599 Global regulator protein family M1S30_12830 PF01351 Ribonuclease HII M1S30_12840 PF01292 Prokaryotic cytochrome b561 M1S30_12845 PF00962 Adenosine/AMP deaminase M1S30_12855 PF13610 DDE domain M1S30_12860 PF00239 Resolvase, N terminal domain M1S30_12860 PF02796 Helix-turn-helix domain of resolvase M1S30_12870 PF13610 DDE domain M1S30_12880 PF00239 Resolvase, N terminal domain M1S30_12880 PF02796 Helix-turn-helix domain of resolvase M1S30_12885 PF13610 DDE domain M1S30_12895 PF04958 Arginine N-succinyltransferase beta subunit M1S30_12900 PF00202 Aminotransferase class-III M1S30_12910 PF00171 Aldehyde dehydrogenase family M1S30_12920 PF00392 Bacterial regulatory proteins, gntR family M1S30_12920 PF07729 FCD domain M1S30_12930 PF00324 Amino acid permease M1S30_12935 PF01266 FAD dependent oxidoreductase M1S30_12940 PF00324 Amino acid permease M1S30_12980 PF03527 RHS protein M1S30_12980 PF05593 RHS Repeat M1S30_12985 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S30_12985 PF04717 Type VI secretion system, phage-baseplate injector M1S30_12985 PF13296 Putative type VI secretion system Rhs element Vgr M1S30_13005 PF03180 NLPA lipoprotein M1S30_13010 PF05987 Bacterial protein of unknown function (DUF898) M1S30_13025 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_13025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S30_13030 PF00764 Arginosuccinate synthase M1S30_13035 PF00990 Diguanylate cyclase, GGDEF domain M1S30_13035 PF01590 GAF domain M1S30_13035 PF00563 EAL domain M1S30_13035 PF00360 Phytochrome region M1S30_13040 PF01979 Amidohydrolase family M1S30_13045 PF00929 Exonuclease M1S30_13055 PF07715 TonB-dependent Receptor Plug Domain M1S30_13055 PF00593 TonB dependent receptor M1S30_13060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S30_13060 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_13065 PF00005 ABC transporter M1S30_13065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S30_13070 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_13070 PF12911 N-terminal TM domain of oligopeptide transport permease C M1S30_13075 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_13080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1S30_13085 PF01464 Transglycosylase SLT domain M1S30_13085 PF01476 LysM domain M1S30_13085 PF01464 Transglycosylase SLT domain M1S30_13085 PF01476 LysM domain M1S30_13090 PF00929 Exonuclease M1S30_13100 PF00293 NUDIX domain M1S30_13100 PF09297 NADH pyrophosphatase zinc ribbon domain M1S30_13110 PF04972 BON domain M1S30_13115 PF02021 Uncharacterised protein family UPF0102 M1S30_13120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S30_13130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_13130 PF03466 LysR substrate binding domain M1S30_13135 PF01810 LysE type translocator M1S30_13145 PF13411 MerR HTH family regulatory protein M1S30_13155 PF01494 FAD binding domain M1S30_13160 PF01494 FAD binding domain M1S30_13165 PF05195 Aminopeptidase P, N-terminal domain M1S30_13165 PF00557 Metallopeptidase family M24 M1S30_13260 PF01464 Transglycosylase SLT domain M1S30_13260 PF10145 Phage-related minor tail protein M1S30_13260 PF01551 Peptidase family M23 M1S30_13320 PF04860 Phage portal protein M1S30_13420 PF03796 DnaB-like helicase C terminal domain M1S30_13420 PF00772 DnaB-like helicase N terminal domain M1S30_13435 PF01726 LexA DNA binding domain M1S30_13435 PF00717 Peptidase S24-like M1S30_13490 PF08019 Phosphoethanolamine transferase EptA/EptB M1S30_13490 PF00884 Sulfatase M1S30_13535 PF01476 LysM domain M1S30_13535 PF08525 Opacity-associated protein A N-terminal motif M1S30_13535 PF01551 Peptidase family M23 M1S30_13860 PF01812 5-formyltetrahydrofolate cyclo-ligase family M1S30_13865 PF04355 SmpA / OmlA family M1S30_13865 PF00691 OmpA family M1S30_13870 PF13018 Extended Signal Peptide of Type V secretion system M1S30_13870 PF03895 YadA-like membrane anchor domain M1S30_13870 PF05658 Head domain of trimeric autotransporter adhesin M1S30_13870 PF05662 Coiled stalk of trimeric autotransporter adhesin M1S30_13875 PF00004 ATPase family associated with various cellular activities (AAA) M1S30_13875 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S30_13875 PF02190 ATP-dependent protease La (LON) substrate-binding domain M1S30_13880 PF02590 Predicted SPOUT methyltransferase M1S30_13885 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M1S30_13895 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S30_13895 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S30_13900 PF04060 Putative Fe-S cluster M1S30_13905 PF10576 Iron-sulfur binding domain of endonuclease III M1S30_13905 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S30_13905 PF00633 Helix-hairpin-helix motif M1S30_13915 PF05191 Adenylate kinase, active site lid M1S30_13930 PF03717 Penicillin-binding Protein dimerisation domain M1S30_13930 PF00905 Penicillin binding protein transpeptidase domain M1S30_13945 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S30_13950 PF01730 UreF M1S30_13955 PF05194 UreE urease accessory protein, C-terminal domain M1S30_13955 PF02814 UreE urease accessory protein, N-terminal domain M1S30_13960 PF01979 Amidohydrolase family M1S30_13960 PF00449 Urease alpha-subunit, N-terminal domain M1S30_13965 PF00699 Urease beta subunit M1S30_13970 PF00547 Urease, gamma subunit M1S30_13975 PF01774 UreD urease accessory protein M1S30_13990 PF00463 Isocitrate lyase family M1S30_13995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_13995 PF03466 LysR substrate binding domain M1S30_14000 PF00571 CBS domain M1S30_14000 PF03471 Transporter associated domain M1S30_14000 PF01595 Cyclin M transmembrane N-terminal domain M1S30_14005 PF03600 Citrate transporter M1S30_14020 PF00009 Elongation factor Tu GTP binding domain M1S30_14025 PF01507 Phosphoadenosine phosphosulfate reductase family M1S30_14035 PF14052 Capsule assembly protein Wzi M1S30_14040 PF00152 tRNA synthetases class II (D, K and N) M1S30_14040 PF01336 OB-fold nucleic acid binding domain M1S30_14055 PF00301 Rubredoxin M1S30_14060 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_14060 PF18113 Rubredoxin binding C-terminal domain M1S30_14065 PF00561 alpha/beta hydrolase fold M1S30_14070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_14070 PF03466 LysR substrate binding domain M1S30_14080 PF02503 Polyphosphate kinase middle domain M1S30_14080 PF17941 Polyphosphate kinase C-terminal domain 1 M1S30_14080 PF13090 Polyphosphate kinase C-terminal domain 2 M1S30_14080 PF13089 Polyphosphate kinase N-terminal domain M1S30_14085 PF00912 Transglycosylase M1S30_14090 PF01694 Rhomboid family M1S30_14100 PF00005 ABC transporter M1S30_14105 PF13472 GDSL-like Lipase/Acylhydrolase family M1S30_14110 PF00484 Carbonic anhydrase M1S30_14115 PF00561 alpha/beta hydrolase fold M1S30_14125 PF07715 TonB-dependent Receptor Plug Domain M1S30_14125 PF00593 TonB dependent receptor M1S30_14130 PF01521 Iron-sulphur cluster biosynthesis M1S30_14130 PF01106 NifU-like domain M1S30_14140 PF00884 Sulfatase M1S30_14145 PF03781 Sulfatase-modifying factor enzyme 1 M1S30_14160 PF00291 Pyridoxal-phosphate dependent enzyme M1S30_14165 PF01384 Phosphate transporter family M1S30_14170 PF02310 B12 binding domain M1S30_14170 PF02607 B12 binding domain M1S30_14170 PF02965 Vitamin B12 dependent methionine synthase, activation domain M1S30_14170 PF00809 Pterin binding enzyme M1S30_14170 PF02574 Homocysteine S-methyltransferase M1S30_14175 PF02779 Transketolase, pyrimidine binding domain M1S30_14175 PF02780 Transketolase, C-terminal domain M1S30_14180 PF00456 Transketolase, thiamine diphosphate binding domain M1S30_14185 PF07690 Major Facilitator Superfamily M1S30_14195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_14195 PF03466 LysR substrate binding domain M1S30_14205 PF01263 Aldose 1-epimerase M1S30_14210 PF07690 Major Facilitator Superfamily M1S30_14215 PF12833 Helix-turn-helix domain M1S30_14215 PF02311 AraC-like ligand binding domain M1S30_14220 PF04960 Glutaminase M1S30_14225 PF01327 Polypeptide deformylase M1S30_14230 PF07690 Major Facilitator Superfamily M1S30_14240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S30_14240 PF00205 Thiamine pyrophosphate enzyme, central domain M1S30_14240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S30_14245 PF00171 Aldehyde dehydrogenase family M1S30_14250 PF01958 Domain of unknown function DUF108 M1S30_14250 PF03447 Homoserine dehydrogenase, NAD binding domain M1S30_14260 PF12697 Alpha/beta hydrolase family M1S30_14270 PF07690 Major Facilitator Superfamily M1S30_14275 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_14275 PF14759 Reductase C-terminal M1S30_14280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S30_14290 PF00355 Rieske [2Fe-2S] domain M1S30_14300 PF00355 Rieske [2Fe-2S] domain M1S30_14305 PF09339 IclR helix-turn-helix domain M1S30_14305 PF01614 Bacterial transcriptional regulator M1S30_14320 PF00378 Enoyl-CoA hydratase/isomerase M1S30_14330 PF00535 Glycosyl transferase family 2 M1S30_14335 PF01522 Polysaccharide deacetylase M1S30_14335 PF14883 Hypothetical glycosyl hydrolase family 13 M1S30_14340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S30_14345 PF07152 YaeQ protein M1S30_14350 PF00375 Sodium:dicarboxylate symporter family M1S30_14355 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S30_14355 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S30_14365 PF03061 Thioesterase superfamily M1S30_14375 PF02028 BCCT, betaine/carnitine/choline family transporter M1S30_14380 PF02028 BCCT, betaine/carnitine/choline family transporter M1S30_14385 PF13977 BetI-type transcriptional repressor, C-terminal M1S30_14385 PF00440 Bacterial regulatory proteins, tetR family M1S30_14390 PF00171 Aldehyde dehydrogenase family M1S30_14395 PF00732 GMC oxidoreductase M1S30_14395 PF05199 GMC oxidoreductase M1S30_14400 PF06039 Malate:quinone oxidoreductase (Mqo) M1S30_14410 PF02574 Homocysteine S-methyltransferase M1S30_14415 PF13520 Amino acid permease M1S30_14440 PF01126 Heme oxygenase M1S30_14450 PF04575 Protein of unknown function (DUF560) M1S30_14460 PF07715 TonB-dependent Receptor Plug Domain M1S30_14460 PF00593 TonB dependent receptor M1S30_14470 PF04542 Sigma-70 region 2 M1S30_14470 PF08281 Sigma-70, region 4 M1S30_14480 PF00701 Dihydrodipicolinate synthetase family M1S30_14485 PF00083 Sugar (and other) transporter M1S30_14505 PF01026 TatD related DNase M1S30_14520 PF07693 KAP family P-loop domain M1S30_14540 PF00436 Single-strand binding protein family M1S30_14595 PF13356 Arm DNA-binding domain M1S30_14595 PF00589 Phage integrase family M1S30_14685 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S30_14685 PF02767 DNA polymerase III beta subunit, central domain M1S30_14685 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S30_14725 PF05016 ParE toxin of type II toxin-antitoxin system, parDE M1S30_14875 PF07007 Lysozyme inhibitor LprI M1S30_14920 PF01695 IstB-like ATP binding protein M1S30_14930 PF00145 C-5 cytosine-specific DNA methylase M1S30_14975 PF01381 Helix-turn-helix M1S30_14975 PF00717 Peptidase S24-like M1S30_15010 PF00929 Exonuclease M1S30_15085 PF07690 Major Facilitator Superfamily M1S30_15090 PF13533 Biotin-lipoyl like M1S30_15095 PF03061 Thioesterase superfamily M1S30_15100 PF00490 Delta-aminolevulinic acid dehydratase M1S30_15105 PF01266 FAD dependent oxidoreductase M1S30_15110 PF01370 NAD dependent epimerase/dehydratase family M1S30_15110 PF08338 Domain of unknown function (DUF1731) M1S30_15130 PF12320 Type 5 capsule protein repressor C-terminal domain M1S30_15130 PF00149 Calcineurin-like phosphoesterase M1S30_15140 PF01168 Alanine racemase, N-terminal domain M1S30_15145 PF00437 Type II/IV secretion system protein M1S30_15150 PF00437 Type II/IV secretion system protein M1S30_15155 PF01475 Ferric uptake regulator family M1S30_15160 PF04355 SmpA / OmlA family M1S30_15165 PF03658 RnfH family Ubiquitin M1S30_15175 PF01814 Hemerythrin HHE cation binding domain M1S30_15180 PF13230 Glutamine amidotransferases class-II M1S30_15190 PF00696 Amino acid kinase family M1S30_15195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S30_15195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S30_15195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S30_15195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S30_15200 PF00692 dUTPase M1S30_15205 PF00580 UvrD/REP helicase N-terminal domain M1S30_15205 PF13361 UvrD-like helicase C-terminal domain M1S30_15210 PF00691 OmpA family M1S30_15210 PF13488 Glycine zipper M1S30_15215 PF01553 Acyltransferase M1S30_15225 PF03775 Septum formation inhibitor MinC, C-terminal domain M1S30_15230 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M1S30_15235 PF03776 Septum formation topological specificity factor MinE M1S30_15255 PF01810 LysE type translocator M1S30_15260 PF17854 FtsK alpha domain M1S30_15260 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M1S30_15260 PF01580 FtsK/SpoIIIE family M1S30_15260 PF09397 Ftsk gamma domain M1S30_15265 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S30_15270 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M1S30_15275 PF04377 Arginine-tRNA-protein transferase, C terminus M1S30_15275 PF04376 Arginine-tRNA-protein transferase, N terminus M1S30_15280 PF00583 Acetyltransferase (GNAT) family M1S30_15295 PF03144 Elongation factor Tu domain 2 M1S30_15295 PF00009 Elongation factor Tu GTP binding domain M1S30_15295 PF03143 Elongation factor Tu C-terminal domain M1S30_15300 PF14492 Elongation Factor G, domain II M1S30_15300 PF00009 Elongation factor Tu GTP binding domain M1S30_15300 PF00679 Elongation factor G C-terminus M1S30_15300 PF03764 Elongation factor G, domain IV M1S30_15300 PF03144 Elongation factor Tu domain 2 M1S30_15305 PF00177 Ribosomal protein S7p/S5e M1S30_15310 PF00164 Ribosomal protein S12/S23 M1S30_15320 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S30_15320 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S30_15325 PF03653 Uncharacterised protein family (UPF0093) M1S30_15330 PF02678 Pirin M1S30_15330 PF05726 Pirin C-terminal cupin domain M1S30_15340 PF02540 NAD synthase M1S30_15340 PF00795 Carbon-nitrogen hydrolase M1S30_15355 PF00175 Oxidoreductase NAD-binding domain M1S30_15355 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S30_15355 PF00970 Oxidoreductase FAD-binding domain M1S30_15360 PF00171 Aldehyde dehydrogenase family M1S30_15365 PF00355 Rieske [2Fe-2S] domain M1S30_15365 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S30_15370 PF07859 alpha/beta hydrolase fold M1S30_15375 PF02028 BCCT, betaine/carnitine/choline family transporter M1S30_15380 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S30_15385 PF03466 LysR substrate binding domain M1S30_15385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_15405 PF00037 4Fe-4S binding domain M1S30_15410 PF01467 Cytidylyltransferase-like M1S30_15415 PF01668 SmpB protein M1S30_15420 PF03358 NADPH-dependent FMN reductase M1S30_15425 PF02578 Multi-copper polyphenol oxidoreductase laccase M1S30_15430 PF00849 RNA pseudouridylate synthase M1S30_15430 PF01479 S4 domain M1S30_15435 PF13525 Outer membrane lipoprotein M1S30_15440 PF10410 DnaB-helicase binding domain of primase M1S30_15440 PF08278 DNA primase DnaG DnaB-binding M1S30_15440 PF01807 CHC2 zinc finger M1S30_15440 PF08275 DNA primase catalytic core, N-terminal domain M1S30_15445 PF01488 Shikimate / quinate 5-dehydrogenase M1S30_15445 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M1S30_15445 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M1S30_15455 PF03550 Outer membrane lipoprotein LolB M1S30_15460 PF00288 GHMP kinases N terminal domain M1S30_15460 PF08544 GHMP kinases C terminal M1S30_15485 PF14572 Phosphoribosyl synthetase-associated domain M1S30_15485 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S30_15490 PF01386 Ribosomal L25p family M1S30_15495 PF01195 Peptidyl-tRNA hydrolase M1S30_15500 PF02261 Aspartate decarboxylase M1S30_15515 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S30_15525 PF02581 Thiamine monophosphate synthase M1S30_15525 PF03070 TENA/THI-4/PQQC family M1S30_15525 PF08543 Phosphomethylpyrimidine kinase M1S30_15530 PF04972 BON domain M1S30_15530 PF01476 LysM domain M1S30_15535 PF00550 Phosphopantetheine attachment site M1S30_15545 PF00698 Acyl transferase domain M1S30_15550 PF01783 Ribosomal L32p protein family M1S30_15555 PF02620 Large ribosomal RNA subunit accumulation protein YceD M1S30_15560 PF04315 Elongation factor P hydroxylase M1S30_15565 PF01300 Telomere recombination M1S30_15570 PF02616 Segregation and condensation protein ScpA M1S30_15575 PF04079 Segregation and condensation complex subunit ScpB M1S30_15580 PF00849 RNA pseudouridylate synthase M1S30_15580 PF01479 S4 domain M1S30_15595 PF00155 Aminotransferase class I and II M1S30_15600 PF00202 Aminotransferase class-III M1S30_15600 PF04055 Radical SAM superfamily M1S30_15600 PF06968 Biotin and Thiamin Synthesis associated domain M1S30_15605 PF08241 Methyltransferase domain M1S30_15605 PF12697 Alpha/beta hydrolase family M1S30_15610 PF02358 Trehalose-phosphatase M1S30_15615 PF00982 Glycosyltransferase family 20 M1S30_15620 PF07690 Major Facilitator Superfamily M1S30_15625 PF00210 Ferritin-like domain M1S30_15630 PF00533 BRCA1 C Terminus (BRCT) domain M1S30_15630 PF01653 NAD-dependent DNA ligase adenylation domain M1S30_15630 PF03120 NAD-dependent DNA ligase OB-fold domain M1S30_15630 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M1S30_15630 PF12826 Helix-hairpin-helix motif M1S30_15640 PF06470 SMC proteins Flexible Hinge Domain M1S30_15640 PF02463 RecF/RecN/SMC N terminal domain M1S30_15650 PF01925 Sulfite exporter TauE/SafE M1S30_15660 PF03309 Type III pantothenate kinase M1S30_15665 PF02978 Signal peptide binding domain M1S30_15665 PF00448 SRP54-type protein, GTPase domain M1S30_15665 PF02881 SRP54-type protein, helical bundle domain M1S30_15675 PF01207 Dihydrouridine synthase (Dus) M1S30_15715 PF00692 dUTPase M1S30_15730 PF01048 Phosphorylase superfamily M1S30_15735 PF10609 NUBPL iron-transfer P-loop NTPase M1S30_15745 PF01588 Putative tRNA binding domain M1S30_15745 PF09334 tRNA synthetases class I (M) M1S30_15770 PF13533 Biotin-lipoyl like M1S30_15775 PF00291 Pyridoxal-phosphate dependent enzyme M1S30_15790 PF05552 Conserved TM helix M1S30_15805 PF00175 Oxidoreductase NAD-binding domain M1S30_15805 PF00970 Oxidoreductase FAD-binding domain M1S30_15810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_15810 PF03466 LysR substrate binding domain M1S30_15815 PF00313 'Cold-shock' DNA-binding domain M1S30_15825 PF00361 Proton-conducting membrane transporter M1S30_15830 PF00361 Proton-conducting membrane transporter M1S30_15835 PF00361 Proton-conducting membrane transporter M1S30_15835 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S30_15840 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S30_15845 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M1S30_15850 PF12838 4Fe-4S dicluster domain M1S30_15855 PF00146 NADH dehydrogenase M1S30_15860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S30_15860 PF00384 Molybdopterin oxidoreductase M1S30_15860 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M1S30_15865 PF10531 SLBB domain M1S30_15865 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M1S30_15865 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M1S30_15875 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M1S30_15875 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M1S30_15880 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M1S30_15885 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M1S30_15890 PF17151 Periplasmic sensor domain M1S30_15890 PF00990 Diguanylate cyclase, GGDEF domain M1S30_15900 PF00672 HAMP domain M1S30_15900 PF00512 His Kinase A (phospho-acceptor) domain M1S30_15900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_15905 PF00072 Response regulator receiver domain M1S30_15905 PF00486 Transcriptional regulatory protein, C terminal M1S30_15915 PF00317 Ribonucleotide reductase, all-alpha domain M1S30_15915 PF02867 Ribonucleotide reductase, barrel domain M1S30_15915 PF03477 ATP cone domain M1S30_15925 PF00268 Ribonucleotide reductase, small chain M1S30_15935 PF00672 HAMP domain M1S30_15935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_15935 PF00512 His Kinase A (phospho-acceptor) domain M1S30_15935 PF13755 Sensor N-terminal transmembrane domain M1S30_15935 PF13756 Stimulus-sensing domain M1S30_16005 PF13360 PQQ-like domain M1S30_16005 PF01011 PQQ enzyme repeat M1S30_16030 PF02567 Phenazine biosynthesis-like protein M1S30_16055 PF01613 Flavin reductase like domain M1S30_16060 PF08267 Cobalamin-independent synthase, N-terminal domain M1S30_16060 PF01717 Cobalamin-independent synthase, Catalytic domain M1S30_16070 PF03466 LysR substrate binding domain M1S30_16070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_16075 PF01810 LysE type translocator M1S30_16085 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S30_16085 PF12833 Helix-turn-helix domain M1S30_16090 PF07687 Peptidase dimerisation domain M1S30_16090 PF01546 Peptidase family M20/M25/M40 M1S30_16100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_16100 PF03466 LysR substrate binding domain M1S30_16105 PF07690 Major Facilitator Superfamily M1S30_16115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_16115 PF03466 LysR substrate binding domain M1S30_16120 PF14537 Cytochrome c3 M1S30_16120 PF00890 FAD binding domain M1S30_16130 PF02515 CoA-transferase family III M1S30_16135 PF07690 Major Facilitator Superfamily M1S30_16140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_16140 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_16140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_16145 PF03466 LysR substrate binding domain M1S30_16145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_16150 PF00107 Zinc-binding dehydrogenase M1S30_16150 PF08240 Alcohol dehydrogenase GroES-like domain M1S30_16155 PF00962 Adenosine/AMP deaminase M1S30_16180 PF02445 Quinolinate synthetase A protein M1S30_16185 PF01960 ArgJ family M1S30_16190 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S30_16190 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S30_16195 PF00893 Small Multidrug Resistance protein M1S30_16205 PF05275 Copper resistance protein B precursor (CopB) M1S30_16210 PF07731 Multicopper oxidase M1S30_16210 PF07732 Multicopper oxidase M1S30_16210 PF00394 Multicopper oxidase M1S30_16225 PF00834 Ribulose-phosphate 3 epimerase family M1S30_16235 PF00756 Putative esterase M1S30_16245 PF04445 Putative SAM-dependent methyltransferase M1S30_16250 PF00814 Glycoprotease family M1S30_16255 PF00132 Bacterial transferase hexapeptide (six repeats) M1S30_16260 PF00293 NUDIX domain M1S30_16300 PF00425 chorismate binding enzyme M1S30_16300 PF04715 Anthranilate synthase component I, N terminal region M1S30_16305 PF00155 Aminotransferase class I and II M1S30_16310 PF00815 Histidinol dehydrogenase M1S30_16315 PF01634 ATP phosphoribosyltransferase M1S30_16320 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S30_16325 PF01722 BolA-like protein M1S30_16330 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M1S30_16335 PF04963 Sigma-54 factor, core binding domain M1S30_16335 PF00309 Sigma-54 factor, Activator interacting domain (AID) M1S30_16335 PF04552 Sigma-54, DNA binding domain M1S30_16380 PF00795 Carbon-nitrogen hydrolase M1S30_16390 PF01047 MarR family M1S30_16395 PF02566 OsmC-like protein M1S30_16400 PF00437 Type II/IV secretion system protein M1S30_16420 PF01612 3'-5' exonuclease M1S30_16420 PF00476 DNA polymerase family A M1S30_16420 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S30_16420 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S30_16425 PF02325 YGGT family M1S30_16430 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S30_16430 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S30_16435 PF01171 PP-loop family M1S30_16435 PF09179 TilS substrate binding domain M1S30_16435 PF11734 TilS substrate C-terminal domain M1S30_16440 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M1S30_16445 PF02541 Ppx/GppA phosphatase family M1S30_16450 PF00085 Thioredoxin M1S30_16455 PF07498 Rho termination factor, N-terminal domain M1S30_16455 PF07497 Rho termination factor, RNA-binding domain M1S30_16455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S30_16470 PF00216 Bacterial DNA-binding protein M1S30_16475 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M1S30_16475 PF03483 B3/4 domain M1S30_16475 PF01588 Putative tRNA binding domain M1S30_16475 PF03147 Ferredoxin-fold anticodon binding domain M1S30_16475 PF03484 tRNA synthetase B5 domain M1S30_16480 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M1S30_16480 PF01409 tRNA synthetases class II core domain (F) M1S30_16500 PF00453 Ribosomal protein L20 M1S30_16505 PF01632 Ribosomal protein L35 M1S30_16515 PF07690 Major Facilitator Superfamily M1S30_16520 PF09335 SNARE associated Golgi protein M1S30_16525 PF00043 Glutathione S-transferase, C-terminal domain M1S30_16525 PF02798 Glutathione S-transferase, N-terminal domain M1S30_16530 PF00707 Translation initiation factor IF-3, C-terminal domain M1S30_16530 PF05198 Translation initiation factor IF-3, N-terminal domain M1S30_16535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S30_16535 PF03129 Anticodon binding domain M1S30_16535 PF02824 TGS domain M1S30_16535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S30_16540 PF00501 AMP-binding enzyme M1S30_16540 PF13193 AMP-binding enzyme C-terminal domain M1S30_16545 PF04751 Protein of unknown function (DUF615) M1S30_16550 PF00381 PTS HPr component phosphorylation site M1S30_16555 PF03668 P-loop ATPase protein family M1S30_16560 PF02569 Pantoate-beta-alanine ligase M1S30_16565 PF02548 Ketopantoate hydroxymethyltransferase M1S30_16570 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M1S30_16575 PF01743 Poly A polymerase head domain M1S30_16575 PF12626 Polymerase A arginine-rich C-terminus M1S30_16575 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S30_16585 PF03819 MazG nucleotide pyrophosphohydrolase domain M1S30_16595 PF13291 ACT domain M1S30_16595 PF02824 TGS domain M1S30_16595 PF04607 Region found in RelA / SpoT proteins M1S30_16600 PF05958 tRNA (Uracil-5-)-methyltransferase M1S30_16610 PF00291 Pyridoxal-phosphate dependent enzyme M1S30_16615 PF00672 HAMP domain M1S30_16615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_16615 PF00512 His Kinase A (phospho-acceptor) domain M1S30_16615 PF01627 Hpt domain M1S30_16615 PF00072 Response regulator receiver domain M1S30_16615 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M1S30_16620 PF00378 Enoyl-CoA hydratase/isomerase M1S30_16625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S30_16625 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S30_16630 PF01261 Xylose isomerase-like TIM barrel M1S30_16640 PF00106 short chain dehydrogenase M1S30_16645 PF02233 NAD(P) transhydrogenase beta subunit M1S30_16650 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M1S30_16655 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M1S30_16655 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M1S30_16660 PF00892 EamA-like transporter family M1S30_16670 PF07690 Major Facilitator Superfamily M1S30_16675 PF01207 Dihydrouridine synthase (Dus) M1S30_16685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_16685 PF03466 LysR substrate binding domain M1S30_16695 PF00899 ThiF family M1S30_16705 PF00694 Aconitase C-terminal domain M1S30_16705 PF00330 Aconitase family (aconitate hydratase) M1S30_16710 PF01026 TatD related DNase M1S30_16725 PF00009 Elongation factor Tu GTP binding domain M1S30_16725 PF03144 Elongation factor Tu domain 2 M1S30_16725 PF16658 Class II release factor RF3, C-terminal domain M1S30_16745 PF03707 Bacterial signalling protein N terminal repeat M1S30_16745 PF00990 Diguanylate cyclase, GGDEF domain M1S30_16745 PF00563 EAL domain M1S30_16750 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M1S30_16750 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M1S30_16755 PF10369 Small subunit of acetolactate synthase M1S30_16760 PF00205 Thiamine pyrophosphate enzyme, central domain M1S30_16760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S30_16760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S30_16770 PF08264 Anticodon-binding domain of tRNA M1S30_16770 PF00133 tRNA synthetases class I (I, L, M and V) M1S30_16770 PF13603 Leucyl-tRNA synthetase, Domain 2 M1S30_16770 PF09334 tRNA synthetases class I (M) M1S30_16785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S30_16790 PF00005 ABC transporter M1S30_16790 PF02687 FtsX-like permease family M1S30_16790 PF12704 MacB-like periplasmic core domain M1S30_16795 PF02321 Outer membrane efflux protein M1S30_16810 PF00929 Exonuclease M1S30_16815 PF03193 RsgA GTPase M1S30_16825 PF00462 Glutaredoxin M1S30_16830 PF02556 Preprotein translocase subunit SecB M1S30_16845 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S30_16845 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S30_16860 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S30_16860 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S30_16870 PF04820 Tryptophan halogenase M1S30_16890 PF00221 Aromatic amino acid lyase M1S30_16905 PF00501 AMP-binding enzyme M1S30_16905 PF13193 AMP-binding enzyme C-terminal domain M1S30_16915 PF00550 Phosphopantetheine attachment site M1S30_16920 PF00550 Phosphopantetheine attachment site M1S30_16935 PF01926 50S ribosome-binding GTPase M1S30_16935 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M1S30_16940 PF13360 PQQ-like domain M1S30_16950 PF13393 Histidyl-tRNA synthetase M1S30_16950 PF03129 Anticodon binding domain M1S30_16955 PF04551 GcpE protein M1S30_16960 PF13464 Domain of unknown function (DUF4115) M1S30_16970 PF04055 Radical SAM superfamily M1S30_16975 PF00334 Nucleoside diphosphate kinase M1S30_16980 PF04384 Iron-sulphur cluster assembly M1S30_16985 PF01569 PAP2 superfamily M1S30_16990 PF13439 Glycosyltransferase Family 4 M1S30_16990 PF00534 Glycosyl transferases group 1 M1S30_16995 PF17804 Tail specific protease N-terminal domain M1S30_16995 PF11818 C-terminal domain of tail specific protease (DUF3340) M1S30_16995 PF00595 PDZ domain M1S30_16995 PF03572 Peptidase family S41 M1S30_17000 PF00933 Glycosyl hydrolase family 3 N terminal domain M1S30_17010 PF00561 alpha/beta hydrolase fold M1S30_17015 PF00171 Aldehyde dehydrogenase family M1S30_17020 PF00171 Aldehyde dehydrogenase family M1S30_17025 PF01202 Shikimate kinase M1S30_17030 PF02447 GntP family permease M1S30_17035 PF01081 KDPG and KHG aldolase M1S30_17040 PF00920 Dehydratase family M1S30_17045 PF00871 Acetokinase family M1S30_17050 PF01515 Phosphate acetyl/butaryl transferase M1S30_17050 PF07085 DRTGG domain M1S30_17055 PF05683 Fumarase C-terminus M1S30_17055 PF05681 Fumarate hydratase (Fumerase) M1S30_17070 PF06689 ClpX C4-type zinc finger M1S30_17070 PF10431 C-terminal, D2-small domain, of ClpB protein M1S30_17070 PF07724 AAA domain (Cdc48 subfamily) M1S30_17075 PF00574 Clp protease M1S30_17080 PF05697 Bacterial trigger factor protein (TF) M1S30_17080 PF05698 Bacterial trigger factor protein (TF) C-terminus M1S30_17080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S30_17085 PF00593 TonB dependent receptor M1S30_17085 PF07715 TonB-dependent Receptor Plug Domain M1S30_17090 PF13640 2OG-Fe(II) oxygenase superfamily M1S30_17090 PF18331 PKHD-type hydroxylase C-terminal domain M1S30_17095 PF00682 HMGL-like M1S30_17095 PF08502 LeuA allosteric (dimerisation) domain M1S30_17100 PF00561 alpha/beta hydrolase fold M1S30_17105 PF00561 alpha/beta hydrolase fold M1S30_17105 PF07021 Methionine biosynthesis protein MetW M1S30_17115 PF01725 Ham1 family M1S30_17125 PF02416 mttA/Hcf106 family M1S30_17130 PF02416 mttA/Hcf106 family M1S30_17135 PF00902 Sec-independent protein translocase protein (TatC) M1S30_17155 PF01790 Prolipoprotein diacylglyceryl transferase M1S30_17170 PF00303 Thymidylate synthase M1S30_17175 PF00186 Dihydrofolate reductase M1S30_17185 PF01625 Peptide methionine sulfoxide reductase M1S30_17195 PF01618 MotA/TolQ/ExbB proton channel family M1S30_17205 PF01842 ACT domain M1S30_17205 PF00551 Formyl transferase M1S30_17215 PF00171 Aldehyde dehydrogenase family M1S30_17220 PF00830 Ribosomal L28 family M1S30_17225 PF00471 Ribosomal protein L33 M1S30_17230 PF00999 Sodium/hydrogen exchanger family M1S30_17230 PF02254 TrkA-N domain M1S30_17250 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) M1S30_17255 PF00580 UvrD/REP helicase N-terminal domain M1S30_17255 PF13361 UvrD-like helicase C-terminal domain M1S30_17270 PF01751 Toprim domain M1S30_17270 PF08272 Topoisomerase I zinc-ribbon-like M1S30_17270 PF01131 DNA topoisomerase M1S30_17270 PF01396 Topoisomerase DNA binding C4 zinc finger M1S30_17280 PF01638 HxlR-like helix-turn-helix M1S30_17285 PF08240 Alcohol dehydrogenase GroES-like domain M1S30_17285 PF00107 Zinc-binding dehydrogenase M1S30_17290 PF04102 SlyX M1S30_17295 PF16326 ABC transporter C-terminal domain M1S30_17295 PF00005 ABC transporter M1S30_17295 PF12848 ABC transporter M1S30_17300 PF01810 LysE type translocator M1S30_17305 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S30_17315 PF00375 Sodium:dicarboxylate symporter family M1S30_17325 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S30_17325 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S30_17345 PF01416 tRNA pseudouridine synthase M1S30_17355 PF01176 Translation initiation factor 1A / IF-1 M1S30_17370 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S30_17380 PF00694 Aconitase C-terminal domain M1S30_17385 PF00330 Aconitase family (aconitate hydratase) M1S30_17395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_17395 PF03466 LysR substrate binding domain M1S30_17415 PF00293 NUDIX domain M1S30_17420 PF01590 GAF domain M1S30_17420 PF05524 PEP-utilising enzyme, N-terminal M1S30_17420 PF00391 PEP-utilising enzyme, mobile domain M1S30_17420 PF02896 PEP-utilising enzyme, TIM barrel domain M1S30_17425 PF00141 Peroxidase M1S30_17430 PF12706 Beta-lactamase superfamily domain M1S30_17435 PF03466 LysR substrate binding domain M1S30_17435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_17445 PF02798 Glutathione S-transferase, N-terminal domain M1S30_17450 PF13280 WYL domain M1S30_17450 PF08279 HTH domain M1S30_17455 PF13419 Haloacid dehalogenase-like hydrolase M1S30_17460 PF00849 RNA pseudouridylate synthase M1S30_17460 PF01479 S4 domain M1S30_17465 PF12111 Polyribonucleotide phosphorylase C terminal M1S30_17465 PF10150 Ribonuclease E/G family M1S30_17465 PF00575 S1 RNA binding domain M1S30_17470 PF00501 AMP-binding enzyme M1S30_17470 PF13193 AMP-binding enzyme C-terminal domain M1S30_17485 PF03466 LysR substrate binding domain M1S30_17485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_17490 PF00106 short chain dehydrogenase M1S30_17495 PF06969 HemN C-terminal domain M1S30_17495 PF04055 Radical SAM superfamily M1S30_17505 PF01554 MatE M1S30_17510 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S30_17510 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_17510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_17515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_17515 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S30_17520 PF03109 ABC1 family M1S30_17525 PF01197 Ribosomal protein L31 M1S30_17540 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1S30_17560 PF03884 DNA gyrase inhibitor YacG M1S30_17565 PF00753 Metallo-beta-lactamase superfamily M1S30_17570 PF00762 Ferrochelatase M1S30_17580 PF01177 Asp/Glu/Hydantoin racemase M1S30_17595 PF01206 Sulfurtransferase TusA M1S30_17600 PF03471 Transporter associated domain M1S30_17600 PF00571 CBS domain M1S30_17605 PF00795 Carbon-nitrogen hydrolase M1S30_17610 PF01588 Putative tRNA binding domain M1S30_17620 PF07963 Prokaryotic N-terminal methylation motif M1S30_17620 PF08334 Type II secretion system (T2SS), protein G M1S30_17625 PF00482 Type II secretion system (T2SS), protein F M1S30_17630 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M1S30_17630 PF18074 Primosomal protein N C-terminal domain M1S30_17630 PF00271 Helicase conserved C-terminal domain M1S30_17630 PF00270 DEAD/DEAH box helicase M1S30_17630 PF17764 3′ DNA-binding domain (3′BD) M1S30_17635 PF00999 Sodium/hydrogen exchanger family M1S30_17635 PF02254 TrkA-N domain M1S30_17640 PF01430 Hsp33 protein M1S30_17650 PF00226 DnaJ domain M1S30_17650 PF01556 DnaJ C terminal domain M1S30_17660 PF01544 CorA-like Mg2+ transporter protein M1S30_17665 PF00013 KH domain M1S30_17665 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M1S30_17665 PF01138 3' exoribonuclease family, domain 1 M1S30_17665 PF03725 3' exoribonuclease family, domain 2 M1S30_17665 PF00575 S1 RNA binding domain M1S30_17670 PF00312 Ribosomal protein S15 M1S30_17675 PF00144 Beta-lactamase M1S30_17680 PF13538 UvrD-like helicase C-terminal domain M1S30_17685 PF12705 PD-(D/E)XK nuclease superfamily M1S30_17685 PF00580 UvrD/REP helicase N-terminal domain M1S30_17685 PF13361 UvrD-like helicase C-terminal domain M1S30_17690 PF17946 RecC C-terminal domain M1S30_17700 PF03976 Polyphosphate kinase 2 (PPK2) M1S30_17710 PF01209 ubiE/COQ5 methyltransferase family M1S30_17720 PF03109 ABC1 family M1S30_17725 PF01494 FAD binding domain M1S30_17730 PF01502 Phosphoribosyl-AMP cyclohydrolase M1S30_17745 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S30_17745 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M1S30_17745 PF13244 Domain of unknown function (DUF4040) M1S30_17745 PF00361 Proton-conducting membrane transporter M1S30_17750 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S30_17755 PF00361 Proton-conducting membrane transporter M1S30_17760 PF01899 Na+/H+ ion antiporter subunit M1S30_17765 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M1S30_17770 PF03334 Na+/H+ antiporter subunit M1S30_17775 PF02033 Ribosome-binding factor A M1S30_17780 PF11987 Translation-initiation factor 2 M1S30_17780 PF08364 Bacterial translation initiation factor IF-2 associated region M1S30_17780 PF00009 Elongation factor Tu GTP binding domain M1S30_17780 PF04760 Translation initiation factor IF-2, N-terminal region M1S30_17785 PF13184 NusA-like KH domain M1S30_17785 PF08529 NusA N-terminal domain M1S30_17785 PF00575 S1 RNA binding domain M1S30_17790 PF02576 RimP N-terminal domain M1S30_17790 PF17384 RimP C-terminal SH3 domain M1S30_17810 PF03840 Preprotein translocase SecG subunit M1S30_17815 PF00121 Triosephosphate isomerase M1S30_17820 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S30_17820 PF00437 Type II/IV secretion system protein M1S30_17825 PF00482 Type II secretion system (T2SS), protein F M1S30_17835 PF06750 Bacterial Peptidase A24 N-terminal domain M1S30_17835 PF01478 Type IV leader peptidase family M1S30_17840 PF01121 Dephospho-CoA kinase M1S30_17850 PF00588 SpoU rRNA Methylase family M1S30_17850 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S30_17855 PF06865 Pyrimidine/purine nucleoside phosphorylase M1S30_17865 PF02463 RecF/RecN/SMC N terminal domain M1S30_17870 PF02622 Uncharacterized ACR, COG1678 M1S30_17875 PF03652 Holliday junction resolvase M1S30_17880 PF13533 Biotin-lipoyl like M1S30_17905 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S30_17905 PF12833 Helix-turn-helix domain M1S30_17905 PF02805 Metal binding domain of Ada M1S30_17905 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S30_17910 PF01066 CDP-alcohol phosphatidyltransferase M1S30_17920 PF01541 GIY-YIG catalytic domain M1S30_17920 PF02151 UvrB/uvrC motif M1S30_17920 PF08459 UvrC Helix-hairpin-helix N-terminal M1S30_17940 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S30_17940 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S30_17940 PF00378 Enoyl-CoA hydratase/isomerase M1S30_17945 PF02803 Thiolase, C-terminal domain M1S30_17945 PF00108 Thiolase, N-terminal domain M1S30_17965 PF00376 MerR family regulatory protein M1S30_17965 PF09278 MerR, DNA binding M1S30_17975 PF01323 DSBA-like thioredoxin domain M1S30_17990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_17990 PF00183 Hsp90 protein M1S30_18005 PF13726 Na+-H+ antiporter family M1S30_18005 PF03553 Na+/H+ antiporter family M1S30_18010 PF00561 alpha/beta hydrolase fold M1S30_18030 PF04998 RNA polymerase Rpb1, domain 5 M1S30_18030 PF05000 RNA polymerase Rpb1, domain 4 M1S30_18030 PF04997 RNA polymerase Rpb1, domain 1 M1S30_18030 PF00623 RNA polymerase Rpb1, domain 2 M1S30_18030 PF04983 RNA polymerase Rpb1, domain 3 M1S30_18035 PF04560 RNA polymerase Rpb2, domain 7 M1S30_18035 PF04563 RNA polymerase beta subunit M1S30_18035 PF10385 RNA polymerase beta subunit external 1 domain M1S30_18035 PF04565 RNA polymerase Rpb2, domain 3 M1S30_18035 PF04561 RNA polymerase Rpb2, domain 2 M1S30_18035 PF00562 RNA polymerase Rpb2, domain 6 M1S30_18040 PF00542 Ribosomal protein L7/L12 C-terminal domain M1S30_18040 PF16320 Ribosomal protein L7/L12 dimerisation domain M1S30_18045 PF00466 Ribosomal protein L10 M1S30_18050 PF00687 Ribosomal protein L1p/L10e family M1S30_18055 PF00298 Ribosomal protein L11, RNA binding domain M1S30_18055 PF03946 Ribosomal protein L11, N-terminal domain M1S30_18060 PF00467 KOW motif M1S30_18060 PF02357 Transcription termination factor nusG M1S30_18065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M1S30_18075 PF03143 Elongation factor Tu C-terminal domain M1S30_18075 PF03144 Elongation factor Tu domain 2 M1S30_18075 PF00009 Elongation factor Tu GTP binding domain M1S30_18100 PF00425 chorismate binding enzyme M1S30_18100 PF04715 Anthranilate synthase component I, N terminal region M1S30_18105 PF13419 Haloacid dehalogenase-like hydrolase M1S30_18110 PF12401 Protein of unknown function (DUF2662) M1S30_18110 PF00498 FHA domain M1S30_18115 PF00263 Bacterial type II and III secretion system protein M1S30_18115 PF03958 Bacterial type II/III secretion system short domain M1S30_18130 PF00816 H-NS histone family M1S30_18155 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M1S30_18155 PF03900 Porphobilinogen deaminase, C-terminal domain M1S30_18160 PF04397 LytTr DNA-binding domain M1S30_18160 PF00072 Response regulator receiver domain M1S30_18165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_18165 PF06580 Histidine kinase M1S30_18165 PF07694 5TMR of 5TMR-LYT M1S30_18170 PF14698 Argininosuccinate lyase C-terminal M1S30_18170 PF00206 Lyase M1S30_18175 PF04362 Bacterial Fe(2+) trafficking M1S30_18180 PF01895 PhoU domain M1S30_18185 PF02321 Outer membrane efflux protein M1S30_18190 PF00892 EamA-like transporter family M1S30_18205 PF13667 ThiC-associated domain M1S30_18205 PF01964 Radical SAM ThiC family M1S30_18210 PF00293 NUDIX domain M1S30_18215 PF00149 Calcineurin-like phosphoesterase M1S30_18220 PF01258 Prokaryotic dksA/traR C4-type zinc finger M1S30_18225 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S30_18230 PF01098 Cell cycle protein M1S30_18235 PF08245 Mur ligase middle domain M1S30_18235 PF02875 Mur ligase family, glutamate ligase domain M1S30_18245 PF07664 Ferrous iron transport protein B C terminus M1S30_18245 PF02421 Ferrous iron transport protein B M1S30_18245 PF07670 Nucleoside recognition M1S30_18255 PF02899 Phage integrase, N-terminal SAM-like domain M1S30_18255 PF00589 Phage integrase family M1S30_18260 PF13098 Thioredoxin-like domain M1S30_18260 PF10411 Disulfide bond isomerase protein N-terminus M1S30_18265 PF01842 ACT domain M1S30_18265 PF03447 Homoserine dehydrogenase, NAD binding domain M1S30_18265 PF00742 Homoserine dehydrogenase M1S30_18270 PF00291 Pyridoxal-phosphate dependent enzyme M1S30_18275 PF00768 D-alanyl-D-alanine carboxypeptidase M1S30_18280 PF00196 Bacterial regulatory proteins, luxR family M1S30_18280 PF00072 Response regulator receiver domain M1S30_18285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S30_18285 PF00512 His Kinase A (phospho-acceptor) domain M1S30_18290 PF02954 Bacterial regulatory protein, Fis family M1S30_18290 PF00158 Sigma-54 interaction domain M1S30_18290 PF00072 Response regulator receiver domain M1S30_18295 PF00595 PDZ domain M1S30_18295 PF03572 Peptidase family S41 M1S30_18300 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M1S30_18300 PF01676 Metalloenzyme superfamily M1S30_18305 PF03739 Lipopolysaccharide export system permease LptF/LptG M1S30_18315 PF00883 Cytosol aminopeptidase family, catalytic domain M1S30_18315 PF02789 Cytosol aminopeptidase family, N-terminal domain M1S30_18335 PF00677 Lumazine binding domain M1S30_18345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S30_18345 PF01872 RibD C-terminal domain M1S30_18350 PF03477 ATP cone domain M1S30_18355 PF00909 Ammonium Transporter Family M1S30_18360 PF00543 Nitrogen regulatory protein P-II M1S30_18380 PF01636 Phosphotransferase enzyme family M1S30_18385 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M1S30_18405 PF02909 Tetracyclin repressor-like, C-terminal domain M1S30_18405 PF00440 Bacterial regulatory proteins, tetR family M1S30_18410 PF07690 Major Facilitator Superfamily M1S30_18420 PF00916 Sulfate permease family M1S30_18420 PF01740 STAS domain M1S30_18425 PF00582 Universal stress protein family M1S30_18445 PF00665 Integrase core domain M1S30_18460 PF00392 Bacterial regulatory proteins, gntR family M1S30_18460 PF00155 Aminotransferase class I and II M1S30_18470 PF00701 Dihydrodipicolinate synthetase family M1S30_18485 PF03573 outer membrane porin, OprD family M1S30_18490 PF00719 Inorganic pyrophosphatase M1S30_18505 PF00501 AMP-binding enzyme M1S30_18505 PF13193 AMP-binding enzyme C-terminal domain M1S30_18510 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S30_18510 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S30_18515 PF07690 Major Facilitator Superfamily M1S30_18520 PF03458 UPF0126 domain M1S30_18525 PF02810 SEC-C motif M1S30_18530 PF03741 Integral membrane protein TerC family M1S30_18530 PF03471 Transporter associated domain M1S30_18535 PF03641 Possible lysine decarboxylase M1S30_18540 PF07690 Major Facilitator Superfamily M1S30_18550 PF11798 IMS family HHH motif M1S30_18550 PF11799 impB/mucB/samB family C-terminal domain M1S30_18550 PF00817 impB/mucB/samB family M1S30_18570 PF11842 Domain of unknown function (DUF3362) M1S30_18570 PF04055 Radical SAM superfamily M1S30_18570 PF08497 Radical SAM N-terminal M1S30_18590 PF03358 NADPH-dependent FMN reductase M1S30_18600 PF00291 Pyridoxal-phosphate dependent enzyme M1S30_18660 PF01327 Polypeptide deformylase M1S30_18670 PF02481 DNA recombination-mediator protein A M1S30_18670 PF17782 DprA winged helix domain M1S30_18675 PF01300 Telomere recombination M1S30_18680 PF00892 EamA-like transporter family M1S30_18685 PF00440 Bacterial regulatory proteins, tetR family M1S30_18690 PF07690 Major Facilitator Superfamily M1S30_18700 PF00255 Glutathione peroxidase M1S30_18710 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M1S30_18715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S30_18715 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S30_18720 PF00231 ATP synthase M1S30_18725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S30_18725 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S30_18725 PF00306 ATP synthase alpha/beta chain, C terminal domain M1S30_18730 PF00213 ATP synthase delta (OSCP) subunit M1S30_18735 PF00430 ATP synthase B/B' CF(0) M1S30_18740 PF00137 ATP synthase subunit C M1S30_18745 PF00119 ATP synthase A chain M1S30_18765 PF00005 ABC transporter M1S30_18770 PF00950 ABC 3 transport family M1S30_18775 PF01810 LysE type translocator M1S30_18780 PF04261 Dyp-type peroxidase family M1S30_18790 PF03949 Malic enzyme, NAD binding domain M1S30_18790 PF00390 Malic enzyme, N-terminal domain M1S30_18795 PF03485 Arginyl tRNA synthetase N terminal domain M1S30_18795 PF05746 DALR anticodon binding domain M1S30_18795 PF00750 tRNA synthetases class I (R) M1S30_18815 PF05726 Pirin C-terminal cupin domain M1S30_18815 PF02678 Pirin M1S30_18825 PF03551 Transcriptional regulator PadR-like family M1S30_18830 PF01909 Nucleotidyltransferase domain M1S30_18830 PF13427 Domain of unknown function (DUF4111) M1S30_18835 PF02540 NAD synthase M1S30_18835 PF00958 GMP synthase C terminal domain M1S30_18835 PF00117 Glutamine amidotransferase class-I M1S30_18840 PF04286 Protein of unknown function (DUF445) M1S30_18845 PF07681 DoxX M1S30_18850 PF09335 SNARE associated Golgi protein M1S30_18865 PF13614 AAA domain M1S30_18875 PF01722 BolA-like protein M1S30_18890 PF01648 4'-phosphopantetheinyl transferase superfamily M1S30_18895 PF12697 Alpha/beta hydrolase family M1S30_18915 PF00975 Thioesterase domain M1S30_18915 PF00550 Phosphopantetheine attachment site M1S30_18915 PF08242 Methyltransferase domain M1S30_18915 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S30_18915 PF16197 Ketoacyl-synthetase C-terminal extension M1S30_18915 PF14765 Polyketide synthase dehydratase M1S30_18915 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S30_18920 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_18920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_18920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_18925 PF00501 AMP-binding enzyme M1S30_18930 PF03472 Autoinducer binding domain M1S30_18930 PF00196 Bacterial regulatory proteins, luxR family M1S30_18940 PF00765 Autoinducer synthase M1S30_18945 PF00083 Sugar (and other) transporter M1S30_18945 PF07690 Major Facilitator Superfamily M1S30_18950 PF00378 Enoyl-CoA hydratase/isomerase M1S30_18955 PF00378 Enoyl-CoA hydratase/isomerase M1S30_18960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S30_18960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S30_18960 PF02770 Acyl-CoA dehydrogenase, middle domain M1S30_18965 PF00501 AMP-binding enzyme M1S30_18965 PF13193 AMP-binding enzyme C-terminal domain M1S30_18970 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S30_18970 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S30_18975 PF00171 Aldehyde dehydrogenase family M1S30_18985 PF00324 Amino acid permease M1S30_18990 PF00324 Amino acid permease M1S30_18995 PF01042 Endoribonuclease L-PSP M1S30_19000 PF00842 Alanine racemase, C-terminal domain M1S30_19000 PF01168 Alanine racemase, N-terminal domain M1S30_19005 PF01266 FAD dependent oxidoreductase M1S30_19010 PF01037 Lrp/AsnC ligand binding domain M1S30_19020 PF07715 TonB-dependent Receptor Plug Domain M1S30_19020 PF00593 TonB dependent receptor M1S30_19035 PF00849 RNA pseudouridylate synthase M1S30_19050 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S30_19050 PF00440 Bacterial regulatory proteins, tetR family M1S30_19060 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S30_19060 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S30_19095 PF00330 Aconitase family (aconitate hydratase) M1S30_19095 PF00694 Aconitase C-terminal domain M1S30_19100 PF00285 Citrate synthase, C-terminal domain M1S30_19110 PF00392 Bacterial regulatory proteins, gntR family M1S30_19110 PF07729 FCD domain M1S30_19120 PF00155 Aminotransferase class I and II M1S30_19125 PF09330 D-lactate dehydrogenase, membrane binding M1S30_19125 PF01565 FAD binding domain M1S30_19130 PF01070 FMN-dependent dehydrogenase M1S30_19135 PF07729 FCD domain M1S30_19135 PF00392 Bacterial regulatory proteins, gntR family M1S30_19140 PF02652 L-lactate permease M1S30_19145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S30_19145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S30_19145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S30_19145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S30_19150 PF16363 GDP-mannose 4,6 dehydratase M1S30_19155 PF00342 Phosphoglucose isomerase M1S30_19160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S30_19160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S30_19160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S30_19165 PF00483 Nucleotidyl transferase M1S30_19170 PF02397 Bacterial sugar transferase M1S30_19175 PF00535 Glycosyl transferase family 2 M1S30_19205 PF08666 SAF domain M1S30_19205 PF03102 NeuB family M1S30_19220 PF02348 Cytidylyltransferase M1S30_19225 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M1S30_19230 PF02719 Polysaccharide biosynthesis protein M1S30_19235 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S30_19235 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S30_19235 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S30_19240 PF18412 Outer-membrane lipoprotein Wza C-terminal domain M1S30_19240 PF10531 SLBB domain M1S30_19240 PF02563 Polysaccharide biosynthesis/export protein M1S30_19245 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S30_19250 PF02706 Chain length determinant protein M1S30_19250 PF13807 G-rich domain on putative tyrosine kinase M1S30_19250 PF13614 AAA domain M1S30_19255 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S30_19255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S30_19260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S30_19260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S30_19265 PF03023 Lipid II flippase MurJ M1S30_19270 PF01510 N-acetylmuramoyl-L-alanine amidase M1S30_19275 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M1S30_19275 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M1S30_19285 PF04185 Phosphoesterase family M1S30_19285 PF05506 Domain of unknown function (DUF756) M1S30_19295 PF01138 3' exoribonuclease family, domain 1 M1S30_19295 PF03725 3' exoribonuclease family, domain 2 M1S30_19300 PF00487 Fatty acid desaturase M1S30_19305 PF00175 Oxidoreductase NAD-binding domain M1S30_19310 PF00440 Bacterial regulatory proteins, tetR family M1S30_19315 PF00440 Bacterial regulatory proteins, tetR family M1S30_19315 PF08360 QacR-like protein, C-terminal region M1S30_19320 PF01323 DSBA-like thioredoxin domain M1S30_19330 PF13419 Haloacid dehalogenase-like hydrolase M1S30_19335 PF00106 short chain dehydrogenase M1S30_19350 PF00696 Amino acid kinase family M1S30_19350 PF00583 Acetyltransferase (GNAT) family M1S30_19355 PF09084 NMT1/THI5 like M1S30_19360 PF09084 NMT1/THI5 like M1S30_19365 PF00296 Luciferase-like monooxygenase M1S30_19370 PF00528 Binding-protein-dependent transport system inner membrane component M1S30_19375 PF00005 ABC transporter M1S30_19380 PF00440 Bacterial regulatory proteins, tetR family M1S30_19380 PF08362 YcdC-like protein, C-terminal region M1S30_19385 PF01048 Phosphorylase superfamily M1S30_19395 PF01687 Riboflavin kinase M1S30_19395 PF06574 FAD synthetase M1S30_19400 PF06827 Zinc finger found in FPG and IleRS M1S30_19400 PF00133 tRNA synthetases class I (I, L, M and V) M1S30_19400 PF08264 Anticodon-binding domain of tRNA M1S30_19405 PF01252 Signal peptidase (SPase) II M1S30_19410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S30_19450 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S30_19455 PF07859 alpha/beta hydrolase fold M1S30_19475 PF03466 LysR substrate binding domain M1S30_19475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S30_19480 PF01025 GrpE M1S30_19485 PF00012 Hsp70 protein M1S30_19505 PF13406 Transglycosylase SLT domain M1S30_19510 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M1S30_19510 PF02222 ATP-grasp domain M1S30_19515 PF00731 AIR carboxylase M1S30_19525 PF08245 Mur ligase middle domain M1S30_19525 PF02875 Mur ligase family, glutamate ligase domain M1S30_19525 PF01225 Mur ligase family, catalytic domain M1S30_19535 PF01569 PAP2 superfamily M1S30_19540 PF03741 Integral membrane protein TerC family M1S30_19550 PF03738 Glutathionylspermidine synthase preATP-grasp M1S30_19555 PF00355 Rieske [2Fe-2S] domain M1S30_19560 PF01979 Amidohydrolase family M1S30_19565 PF00156 Phosphoribosyl transferase domain M1S30_19575 PF10411 Disulfide bond isomerase protein N-terminus M1S30_19575 PF13098 Thioredoxin-like domain M1S30_19580 PF16916 Dimerisation domain of Zinc Transporter M1S30_19580 PF01545 Cation efflux family M1S30_19585 PF02583 Metal-sensitive transcriptional repressor M1S30_19590 PF10396 GTP-binding protein TrmE N-terminus M1S30_19590 PF01926 50S ribosome-binding GTPase M1S30_19590 PF12631 MnmE helical domain M1S30_19595 PF02096 60Kd inner membrane protein M1S30_19595 PF14849 YidC periplasmic domain M1S30_19600 PF01809 Putative membrane protein insertion efficiency factor M1S30_19605 PF00825 Ribonuclease P M1S30_19610 PF00468 Ribosomal protein L34 M1S30_19615 PF13614 AAA domain M1S30_19695 PF10544 T5orf172 domain M1S30_19700 PF13614 AAA domain M1S30_19720 PF00905 Penicillin binding protein transpeptidase domain M1S30_19765 PF00226 DnaJ domain M1S30_19765 PF00684 DnaJ central domain M1S30_19765 PF01556 DnaJ C terminal domain M1S30_19790 PF18272 single-stranded DNA binding TraI N-terminal subdomain M1S30_19790 PF07057 DNA helicase TraI M1S30_19790 PF18340 DNA relaxase TraI 2B/2B-like domain M1S30_19790 PF08751 TrwC relaxase M1S30_19845 PF02796 Helix-turn-helix domain of resolvase M1S30_19845 PF00239 Resolvase, N terminal domain M1S30_19895 PF13098 Thioredoxin-like domain M1S30_19895 PF10411 Disulfide bond isomerase protein N-terminus M1S30_19925 PF06834 TraU protein M1S30_19935 PF06986 Type-1V conjugative transfer system mating pair stabilisation M1S30_19945 PF06122 Conjugative relaxosome accessory transposon protein M1S30_19965 PF11799 impB/mucB/samB family C-terminal domain M1S30_19965 PF00817 impB/mucB/samB family M1S30_19965 PF13438 Domain of unknown function (DUF4113) M1S30_20015 PF00565 Staphylococcal nuclease homologue M1S30_20030 PF00816 H-NS histone family M1S30_20100 PF01807 CHC2 zinc finger M1S30_20100 PF10410 DnaB-helicase binding domain of primase M1S30_20100 PF08275 DNA primase catalytic core, N-terminal domain M1S30_20130 PF00625 Guanylate kinase M1S30_20145 PF07015 VirC1 protein M1S30_20155 PF00589 Phage integrase family M1S30_20155 PF02899 Phage integrase, N-terminal SAM-like domain M1S30_20190 PF02811 PHP domain M1S30_20190 PF14579 Helix-hairpin-helix motif M1S30_20190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S30_20190 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S30_20200 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S30_20200 PF14579 Helix-hairpin-helix motif M1S30_20200 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S30_20200 PF02811 PHP domain M1S30_20215 PF01612 3'-5' exonuclease M1S30_20215 PF00476 DNA polymerase family A M1S30_20215 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S30_20215 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S30_20220 PF00154 recA bacterial DNA recombination protein M1S30_20220 PF03161 LAGLIDADG DNA endonuclease family M1S30_20245 PF06470 SMC proteins Flexible Hinge Domain M1S30_20245 PF02463 RecF/RecN/SMC N terminal domain M1S30_20270 PF00317 Ribonucleotide reductase, all-alpha domain M1S30_20270 PF02867 Ribonucleotide reductase, barrel domain M1S30_20270 PF03477 ATP cone domain M1S30_20275 PF00268 Ribonucleotide reductase, small chain M1S30_20315 PF00929 Exonuclease M1S30_20350 PF13737 Transposase DDE domain M1S30_20360 PF16925 Tetracyclin repressor-like, C-terminal domain M1S30_20360 PF00440 Bacterial regulatory proteins, tetR family M1S30_20370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S30_20380 PF00465 Iron-containing alcohol dehydrogenase M1S30_20395 PF00756 Putative esterase M1S30_20400 PF08240 Alcohol dehydrogenase GroES-like domain M1S30_20400 PF00107 Zinc-binding dehydrogenase M1S30_20405 PF02583 Metal-sensitive transcriptional repressor M1S30_20420 PF00107 Zinc-binding dehydrogenase M1S30_20420 PF13823 Alcohol dehydrogenase GroES-associated M1S30_20420 PF08240 Alcohol dehydrogenase GroES-like domain M1S30_20485 PF04650 YSIRK type signal peptide M1S30_20485 PF03373 Octapeptide repeat M1S30_20485 PF02216 B domain M1S30_20485 PF00746 LPXTG cell wall anchor motif M1S30_20485 PF01476 LysM domain M1S30_20500 PF02559 CarD-like/TRCF domain M1S30_20500 PF00270 DEAD/DEAH box helicase M1S30_20500 PF00271 Helicase conserved C-terminal domain M1S30_20500 PF03461 TRCF domain M1S30_20500 PF17757 UvrB interaction domain M1S30_20520 PF00005 ABC transporter M1S30_20520 PF09383 NIL domain