locus-tag class description M1S49_00005 PF00308 Bacterial dnaA protein M1S49_00005 PF08299 Bacterial dnaA protein helix-turn-helix M1S49_00005 PF11638 DnaA N-terminal domain M1S49_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S49_00010 PF02767 DNA polymerase III beta subunit, central domain M1S49_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S49_00015 PF02463 RecF/RecN/SMC N terminal domain M1S49_00020 PF00204 DNA gyrase B M1S49_00020 PF00986 DNA gyrase B subunit, carboxyl terminus M1S49_00020 PF18053 DNA gyrase B subunit insert domain M1S49_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_00020 PF01751 Toprim domain M1S49_00030 PF09335 SNARE associated Golgi protein M1S49_00035 PF12848 ABC transporter M1S49_00035 PF00005 ABC transporter M1S49_00055 PF01521 Iron-sulphur cluster biosynthesis M1S49_00060 PF00561 alpha/beta hydrolase fold M1S49_00065 PF03702 Anhydro-N-acetylmuramic acid kinase M1S49_00070 PF00579 tRNA synthetases class I (W and Y) M1S49_00110 PF00209 Sodium:neurotransmitter symporter family M1S49_00120 PF01189 16S rRNA methyltransferase RsmB/F M1S49_00120 PF01029 NusB family M1S49_00125 PF02911 Formyl transferase, C-terminal domain M1S49_00125 PF00551 Formyl transferase M1S49_00130 PF00920 Dehydratase family M1S49_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_00145 PF03466 LysR substrate binding domain M1S49_00150 PF00860 Permease family M1S49_00155 PF00311 Phosphoenolpyruvate carboxylase M1S49_00160 PF00440 Bacterial regulatory proteins, tetR family M1S49_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S49_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S49_00170 PF00873 AcrB/AcrD/AcrF family M1S49_00180 PF01556 DnaJ C terminal domain M1S49_00180 PF00684 DnaJ central domain M1S49_00180 PF00226 DnaJ domain M1S49_00190 PF01113 Dihydrodipicolinate reductase, N-terminus M1S49_00190 PF05173 Dihydrodipicolinate reductase, C-terminus M1S49_00200 PF07690 Major Facilitator Superfamily M1S49_00205 PF00248 Aldo/keto reductase family M1S49_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_00210 PF03466 LysR substrate binding domain M1S49_00225 PF00392 Bacterial regulatory proteins, gntR family M1S49_00225 PF00155 Aminotransferase class I and II M1S49_00230 PF00107 Zinc-binding dehydrogenase M1S49_00230 PF08240 Alcohol dehydrogenase GroES-like domain M1S49_00235 PF03352 Methyladenine glycosylase M1S49_00250 PF10576 Iron-sulfur binding domain of endonuclease III M1S49_00250 PF00633 Helix-hairpin-helix motif M1S49_00250 PF14815 NUDIX domain M1S49_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S49_00265 PF07043 Protein of unknown function (DUF1328) M1S49_00270 PF03692 Putative zinc- or iron-chelating domain M1S49_00275 PF07995 Glucose / Sorbosone dehydrogenase M1S49_00280 PF00004 ATPase family associated with various cellular activities (AAA) M1S49_00280 PF16193 AAA C-terminal domain M1S49_00280 PF12002 MgsA AAA+ ATPase C terminal M1S49_00285 PF01226 Formate/nitrite transporter M1S49_00295 PF01259 SAICAR synthetase M1S49_00305 PF00701 Dihydrodipicolinate synthetase family M1S49_00310 PF00857 Isochorismatase family M1S49_00315 PF01758 Sodium Bile acid symporter family M1S49_00320 PF01554 MatE M1S49_00325 PF04463 Protein of unknown function (DUF523) M1S49_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S49_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S49_00345 PF02798 Glutathione S-transferase, N-terminal domain M1S49_00345 PF14497 Glutathione S-transferase, C-terminal domain M1S49_00355 PF00324 Amino acid permease M1S49_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S49_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S49_00375 PF07702 UTRA domain M1S49_00375 PF00392 Bacterial regulatory proteins, gntR family M1S49_00380 PF05962 HutD M1S49_00385 PF17391 Urocanase N-terminal domain M1S49_00385 PF17392 Urocanase C-terminal domain M1S49_00385 PF01175 Urocanase Rossmann-like domain M1S49_00390 PF00221 Aromatic amino acid lyase M1S49_00395 PF00324 Amino acid permease M1S49_00400 PF01979 Amidohydrolase family M1S49_00405 PF00491 Arginase family M1S49_00420 PF01177 Asp/Glu/Hydantoin racemase M1S49_00425 PF01380 SIS domain M1S49_00430 PF00132 Bacterial transferase hexapeptide (six repeats) M1S49_00430 PF14602 Hexapeptide repeat of succinyl-transferase M1S49_00430 PF12804 MobA-like NTP transferase domain M1S49_00435 PF04608 Phosphatidylglycerophosphatase A M1S49_00440 PF00586 AIR synthase related protein, N-terminal domain M1S49_00440 PF02769 AIR synthase related protein, C-terminal domain M1S49_00445 PF01029 NusB family M1S49_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase M1S49_00455 PF00925 GTP cyclohydrolase II M1S49_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S49_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase M1S49_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M1S49_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S49_00490 PF00581 Rhodanese-like domain M1S49_00495 PF02666 Phosphatidylserine decarboxylase M1S49_00500 PF03069 Acetamidase/Formamidase family M1S49_00520 PF00989 PAS fold M1S49_00520 PF00512 His Kinase A (phospho-acceptor) domain M1S49_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_00520 PF11808 Phosphate regulon sensor protein PhoR M1S49_00525 PF00072 Response regulator receiver domain M1S49_00525 PF00486 Transcriptional regulatory protein, C terminal M1S49_00535 PF00106 short chain dehydrogenase M1S49_00540 PF01554 MatE M1S49_00545 PF00155 Aminotransferase class I and II M1S49_00550 PF04286 Protein of unknown function (DUF445) M1S49_00565 PF04262 Glutamate-cysteine ligase M1S49_00570 PF02600 Disulfide bond formation protein DsbB M1S49_00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S49_00575 PF13296 Putative type VI secretion system Rhs element Vgr M1S49_00575 PF04717 Type VI secretion system, phage-baseplate injector M1S49_00580 PF01476 LysM domain M1S49_00580 PF00877 NlpC/P60 family M1S49_00595 PF05728 Uncharacterised protein family (UPF0227) M1S49_00600 PF01751 Toprim domain M1S49_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_00600 PF00986 DNA gyrase B subunit, carboxyl terminus M1S49_00600 PF00204 DNA gyrase B M1S49_00605 PF00106 short chain dehydrogenase M1S49_00610 PF04115 Ureidoglycolate lyase M1S49_00615 PF03561 Allantoicase repeat M1S49_00620 PF01494 FAD binding domain M1S49_00630 PF00860 Permease family M1S49_00635 PF00576 HIUase/Transthyretin family M1S49_00665 PF02683 Cytochrome C biogenesis protein transmembrane region M1S49_00665 PF11412 Disulphide bond corrector protein DsbC M1S49_00670 PF00990 Diguanylate cyclase, GGDEF domain M1S49_00670 PF07694 5TMR of 5TMR-LYT M1S49_00675 PF07859 alpha/beta hydrolase fold M1S49_00685 PF03960 ArsC family M1S49_00690 PF03372 Endonuclease/Exonuclease/phosphatase family M1S49_00695 PF00156 Phosphoribosyl transferase domain M1S49_00700 PF00593 TonB dependent receptor M1S49_00700 PF07715 TonB-dependent Receptor Plug Domain M1S49_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M1S49_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M1S49_00715 PF03033 Glycosyltransferase family 28 N-terminal domain M1S49_00715 PF04101 Glycosyltransferase family 28 C-terminal domain M1S49_00720 PF08245 Mur ligase middle domain M1S49_00720 PF01225 Mur ligase family, catalytic domain M1S49_00720 PF02875 Mur ligase family, glutamate ligase domain M1S49_00725 PF01820 D-ala D-ala ligase N-terminus M1S49_00725 PF07478 D-ala D-ala ligase C-terminus M1S49_00730 PF08478 POTRA domain, FtsQ-type M1S49_00730 PF03799 Cell division protein FtsQ M1S49_00735 PF02491 SHS2 domain inserted in FTSA M1S49_00740 PF00091 Tubulin/FtsZ family, GTPase domain M1S49_00740 PF12327 FtsZ family, C-terminal domain M1S49_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M1S49_00755 PF01551 Peptidase family M23 M1S49_00760 PF00456 Transketolase, thiamine diphosphate binding domain M1S49_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain M1S49_00765 PF00364 Biotin-requiring enzyme M1S49_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S49_00765 PF02817 e3 binding domain M1S49_00775 PF01169 Uncharacterized protein family UPF0016 M1S49_00795 PF00258 Flavodoxin M1S49_00795 PF01613 Flavin reductase like domain M1S49_00800 PF03692 Putative zinc- or iron-chelating domain M1S49_00805 PF00478 IMP dehydrogenase / GMP reductase domain M1S49_00805 PF00571 CBS domain M1S49_00810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S49_00810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S49_00810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S49_00810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S49_00815 PF01243 Pyridoxamine 5'-phosphate oxidase M1S49_00815 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M1S49_00820 PF17768 RecJ OB domain M1S49_00820 PF02272 DHHA1 domain M1S49_00820 PF01368 DHH family M1S49_00840 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S49_00845 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M1S49_00850 PF04452 RNA methyltransferase M1S49_00855 PF00924 Mechanosensitive ion channel M1S49_00865 PF13193 AMP-binding enzyme C-terminal domain M1S49_00865 PF00501 AMP-binding enzyme M1S49_00865 PF16177 Acetyl-coenzyme A synthetase N-terminus M1S49_00870 PF00857 Isochorismatase family M1S49_00875 PF01037 Lrp/AsnC ligand binding domain M1S49_00880 PF00872 Transposase, Mutator family M1S49_00885 PF00296 Luciferase-like monooxygenase M1S49_00890 PF03358 NADPH-dependent FMN reductase M1S49_00895 PF00196 Bacterial regulatory proteins, luxR family M1S49_00895 PF00072 Response regulator receiver domain M1S49_00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_00905 PF00672 HAMP domain M1S49_00905 PF01627 Hpt domain M1S49_00905 PF00072 Response regulator receiver domain M1S49_00905 PF00512 His Kinase A (phospho-acceptor) domain M1S49_00910 PF04341 Protein of unknown function, DUF485 M1S49_00915 PF00474 Sodium:solute symporter family M1S49_00925 PF02028 BCCT, betaine/carnitine/choline family transporter M1S49_00935 PF00990 Diguanylate cyclase, GGDEF domain M1S49_00945 PF00005 ABC transporter M1S49_00945 PF17755 UvrA DNA-binding domain M1S49_00945 PF17760 UvrA interaction domain M1S49_00950 PF00440 Bacterial regulatory proteins, tetR family M1S49_00950 PF16925 Tetracyclin repressor-like, C-terminal domain M1S49_00955 PF08240 Alcohol dehydrogenase GroES-like domain M1S49_00955 PF00107 Zinc-binding dehydrogenase M1S49_00965 PF06942 GlpM protein M1S49_00970 PF08543 Phosphomethylpyrimidine kinase M1S49_00970 PF03070 TENA/THI-4/PQQC family M1S49_00970 PF02581 Thiamine monophosphate synthase M1S49_00980 PF07690 Major Facilitator Superfamily M1S49_00985 PF00436 Single-strand binding protein family M1S49_00995 PF03591 AzlC protein M1S49_01005 PF00324 Amino acid permease M1S49_01010 PF00155 Aminotransferase class I and II M1S49_01010 PF00392 Bacterial regulatory proteins, gntR family M1S49_01015 PF00202 Aminotransferase class-III M1S49_01020 PF00171 Aldehyde dehydrogenase family M1S49_01025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_01030 PF00857 Isochorismatase family M1S49_01035 PF02678 Pirin M1S49_01035 PF05726 Pirin C-terminal cupin domain M1S49_01070 PF07690 Major Facilitator Superfamily M1S49_01075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_01075 PF03466 LysR substrate binding domain M1S49_01095 PF00248 Aldo/keto reductase family M1S49_01100 PF02311 AraC-like ligand binding domain M1S49_01100 PF12833 Helix-turn-helix domain M1S49_01130 PF01638 HxlR-like helix-turn-helix M1S49_01135 PF02525 Flavodoxin-like fold M1S49_01155 PF02705 K+ potassium transporter M1S49_01180 PF00230 Major intrinsic protein M1S49_01195 PF00977 Histidine biosynthesis protein M1S49_01200 PF01636 Phosphotransferase enzyme family M1S49_01215 PF03992 Antibiotic biosynthesis monooxygenase M1S49_01230 PF00977 Histidine biosynthesis protein M1S49_01245 PF00117 Glutamine amidotransferase class-I M1S49_01250 PF00475 Imidazoleglycerol-phosphate dehydratase M1S49_01270 PF00583 Acetyltransferase (GNAT) family M1S49_01275 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M1S49_01275 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M1S49_01285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_01285 PF00512 His Kinase A (phospho-acceptor) domain M1S49_01285 PF00672 HAMP domain M1S49_01290 PF00072 Response regulator receiver domain M1S49_01290 PF00486 Transcriptional regulatory protein, C terminal M1S49_01295 PF16921 Tex protein YqgF-like domain M1S49_01295 PF00575 S1 RNA binding domain M1S49_01295 PF17674 HHH domain M1S49_01295 PF09371 Tex-like protein N-terminal domain M1S49_01300 PF01740 STAS domain M1S49_01300 PF00916 Sulfate permease family M1S49_01305 PF00106 short chain dehydrogenase M1S49_01310 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S49_01315 PF00005 ABC transporter M1S49_01315 PF12848 ABC transporter M1S49_01340 PF04191 Phospholipid methyltransferase M1S49_01360 PF00529 HlyD membrane-fusion protein of T1SS M1S49_01360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S49_01365 PF00873 AcrB/AcrD/AcrF family M1S49_01370 PF01545 Cation efflux family M1S49_01400 PF00324 Amino acid permease M1S49_01415 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S49_01430 PF01795 MraW methylase family M1S49_01440 PF03717 Penicillin-binding Protein dimerisation domain M1S49_01440 PF00905 Penicillin binding protein transpeptidase domain M1S49_01445 PF01225 Mur ligase family, catalytic domain M1S49_01445 PF02875 Mur ligase family, glutamate ligase domain M1S49_01445 PF08245 Mur ligase middle domain M1S49_01450 PF02875 Mur ligase family, glutamate ligase domain M1S49_01450 PF08245 Mur ligase middle domain M1S49_01450 PF01225 Mur ligase family, catalytic domain M1S49_01455 PF00953 Glycosyl transferase family 4 M1S49_01465 PF13847 Methyltransferase domain M1S49_01470 PF00912 Transglycosylase M1S49_01470 PF00905 Penicillin binding protein transpeptidase domain M1S49_01470 PF17092 Penicillin-binding protein OB-like domain M1S49_01475 PF11104 Type IV pilus assembly protein PilM; M1S49_01480 PF05137 Fimbrial assembly protein (PilN) M1S49_01485 PF04350 Pilus assembly protein, PilO M1S49_01495 PF11741 AMIN domain M1S49_01495 PF00263 Bacterial type II and III secretion system protein M1S49_01495 PF03958 Bacterial type II/III secretion system short domain M1S49_01495 PF07660 Secretin and TonB N terminus short domain M1S49_01500 PF01202 Shikimate kinase M1S49_01505 PF01761 3-dehydroquinate synthase M1S49_01515 PF00310 Glutamine amidotransferases class-II M1S49_01515 PF04898 Glutamate synthase central domain M1S49_01515 PF01645 Conserved region in glutamate synthase M1S49_01515 PF01493 GXGXG motif M1S49_01520 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_01520 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M1S49_01530 PF04011 LemA family M1S49_01535 PF04536 TPM domain M1S49_01545 PF00114 Pilin (bacterial filament) M1S49_01545 PF07963 Prokaryotic N-terminal methylation motif M1S49_01555 PF15864 Protein glycosylation ligase M1S49_01555 PF04932 O-Antigen ligase M1S49_01555 PF11846 Virulence factor membrane-bound polymerase, C-terminal M1S49_01560 PF00210 Ferritin-like domain M1S49_01565 PF04324 BFD-like [2Fe-2S] binding domain M1S49_01570 PF01042 Endoribonuclease L-PSP M1S49_01575 PF02824 TGS domain M1S49_01575 PF13291 ACT domain M1S49_01575 PF04607 Region found in RelA / SpoT proteins M1S49_01585 PF01192 RNA polymerase Rpb6 M1S49_01590 PF00625 Guanylate kinase M1S49_01595 PF02401 LytB protein M1S49_01635 PF00886 Ribosomal protein S16 M1S49_01640 PF01782 RimM N-terminal domain M1S49_01640 PF05239 PRC-barrel domain M1S49_01645 PF01746 tRNA (Guanine-1)-methyltransferase M1S49_01650 PF01245 Ribosomal protein L19 M1S49_01655 PF00561 alpha/beta hydrolase fold M1S49_01660 PF03280 Proteobacterial lipase chaperone protein M1S49_01665 PF01509 TruB family pseudouridylate synthase (N terminal domain) M1S49_01665 PF16198 tRNA pseudouridylate synthase B C-terminal domain M1S49_01665 PF09157 Pseudouridine synthase II TruB, C-terminal M1S49_01670 PF01925 Sulfite exporter TauE/SafE M1S49_01680 PF00892 EamA-like transporter family M1S49_01685 PF00892 EamA-like transporter family M1S49_01690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S49_01690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S49_01695 PF01565 FAD binding domain M1S49_01695 PF02913 FAD linked oxidases, C-terminal domain M1S49_01705 PF03992 Antibiotic biosynthesis monooxygenase M1S49_01710 PF02525 Flavodoxin-like fold M1S49_01720 PF07690 Major Facilitator Superfamily M1S49_01725 PF12805 FUSC-like inner membrane protein yccS M1S49_01730 PF00080 Copper/zinc superoxide dismutase (SODC) M1S49_01735 PF01594 AI-2E family transporter M1S49_01740 PF13614 AAA domain M1S49_01770 PF00324 Amino acid permease M1S49_01775 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S49_01775 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S49_01780 PF00202 Aminotransferase class-III M1S49_01785 PF04958 Arginine N-succinyltransferase beta subunit M1S49_01790 PF00171 Aldehyde dehydrogenase family M1S49_01795 PF04996 Succinylarginine dihydrolase M1S49_01800 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M1S49_01815 PF00082 Subtilase family M1S49_01815 PF05922 Peptidase inhibitor I9 M1S49_01830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_01830 PF03466 LysR substrate binding domain M1S49_01835 PF00892 EamA-like transporter family M1S49_01845 PF05746 DALR anticodon binding domain M1S49_01845 PF02092 Glycyl-tRNA synthetase beta subunit M1S49_01850 PF02091 Glycyl-tRNA synthetase alpha subunit M1S49_01875 PF00571 CBS domain M1S49_01880 PF04024 PspC domain M1S49_01890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_01890 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S49_01890 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_01890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_01900 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M1S49_01900 PF01488 Shikimate / quinate 5-dehydrogenase M1S49_01900 PF08501 Shikimate dehydrogenase substrate binding domain M1S49_01905 PF01218 Coproporphyrinogen III oxidase M1S49_01910 PF00925 GTP cyclohydrolase II M1S49_01915 PF02779 Transketolase, pyrimidine binding domain M1S49_01915 PF02780 Transketolase, C-terminal domain M1S49_01915 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M1S49_01920 PF00459 Inositol monophosphatase family M1S49_01925 PF00270 DEAD/DEAH box helicase M1S49_01925 PF12343 Cold shock protein DEAD box A M1S49_01925 PF00271 Helicase conserved C-terminal domain M1S49_01925 PF03880 DbpA RNA binding domain M1S49_01935 PF00005 ABC transporter M1S49_01940 PF02405 Permease MlaE M1S49_01950 PF05494 MlaC protein M1S49_01960 PF01544 CorA-like Mg2+ transporter protein M1S49_01965 PF03641 Possible lysine decarboxylase M1S49_01970 PF00293 NUDIX domain M1S49_01975 PF00156 Phosphoribosyl transferase domain M1S49_01980 PF00271 Helicase conserved C-terminal domain M1S49_01980 PF00270 DEAD/DEAH box helicase M1S49_01980 PF17191 RecG wedge domain M1S49_01995 PF01553 Acyltransferase M1S49_02005 PF00375 Sodium:dicarboxylate symporter family M1S49_02015 PF01926 50S ribosome-binding GTPase M1S49_02020 PF02082 Transcriptional regulator M1S49_02025 PF00042 Globin M1S49_02025 PF00175 Oxidoreductase NAD-binding domain M1S49_02025 PF00970 Oxidoreductase FAD-binding domain M1S49_02030 PF05872 Bacterial protein of unknown function (DUF853) M1S49_02035 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S49_02040 PF00117 Glutamine amidotransferase class-I M1S49_02045 PF00338 Ribosomal protein S10p/S20e M1S49_02050 PF00297 Ribosomal protein L3 M1S49_02055 PF00573 Ribosomal protein L4/L1 family M1S49_02060 PF00276 Ribosomal protein L23 M1S49_02065 PF03947 Ribosomal Proteins L2, C-terminal domain M1S49_02065 PF00181 Ribosomal Proteins L2, RNA binding domain M1S49_02070 PF00203 Ribosomal protein S19 M1S49_02075 PF00237 Ribosomal protein L22p/L17e M1S49_02085 PF00252 Ribosomal protein L16p/L10e M1S49_02090 PF00831 Ribosomal L29 protein M1S49_02095 PF00366 Ribosomal protein S17 M1S49_02100 PF00238 Ribosomal protein L14p/L23e M1S49_02105 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M1S49_02105 PF00467 KOW motif M1S49_02110 PF00673 ribosomal L5P family C-terminus M1S49_02110 PF00281 Ribosomal protein L5 M1S49_02115 PF00253 Ribosomal protein S14p/S29e M1S49_02120 PF00410 Ribosomal protein S8 M1S49_02125 PF00347 Ribosomal protein L6 M1S49_02130 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M1S49_02135 PF03719 Ribosomal protein S5, C-terminal domain M1S49_02135 PF00333 Ribosomal protein S5, N-terminal domain M1S49_02140 PF00327 Ribosomal protein L30p/L7e M1S49_02145 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M1S49_02150 PF00344 SecY translocase M1S49_02155 PF00444 Ribosomal protein L36 M1S49_02160 PF00416 Ribosomal protein S13/S18 M1S49_02165 PF00411 Ribosomal protein S11 M1S49_02170 PF00163 Ribosomal protein S4/S9 N-terminal domain M1S49_02170 PF01479 S4 domain M1S49_02175 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M1S49_02175 PF01000 RNA polymerase Rpb3/RpoA insert domain M1S49_02175 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M1S49_02180 PF01196 Ribosomal protein L17 M1S49_02185 PF00743 Flavin-binding monooxygenase-like M1S49_02190 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_02190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_02190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_02195 PF03937 Flavinator of succinate dehydrogenase M1S49_02225 PF09526 Probable metal-binding protein (DUF2387) M1S49_02230 PF01432 Peptidase family M3 M1S49_02235 PF00575 S1 RNA binding domain M1S49_02235 PF17876 Cold shock domain M1S49_02235 PF08461 Ribonuclease R winged-helix domain M1S49_02235 PF08206 Ribonuclease B OB domain M1S49_02235 PF00773 RNB domain M1S49_02280 PF01557 Fumarylacetoacetate (FAA) hydrolase family M1S49_02285 PF12833 Helix-turn-helix domain M1S49_02290 PF00892 EamA-like transporter family M1S49_02295 PF03631 Virulence factor BrkB M1S49_02300 PF03358 NADPH-dependent FMN reductase M1S49_02325 PF02130 Uncharacterized protein family UPF0054 M1S49_02330 PF02562 PhoH-like protein M1S49_02335 PF00919 Uncharacterized protein family UPF0004 M1S49_02335 PF04055 Radical SAM superfamily M1S49_02335 PF01938 TRAM domain M1S49_02340 PF01551 Peptidase family M23 M1S49_02340 PF10145 Phage-related minor tail protein M1S49_02340 PF01464 Transglycosylase SLT domain M1S49_02350 PF00056 lactate/malate dehydrogenase, NAD binding domain M1S49_02350 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1S49_02370 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M1S49_02375 PF01066 CDP-alcohol phosphatidyltransferase M1S49_02420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_02420 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_02420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_02425 PF17932 Tetracyclin repressor-like, C-terminal domain M1S49_02425 PF00440 Bacterial regulatory proteins, tetR family M1S49_02440 PF01039 Carboxyl transferase domain M1S49_02445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_02445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_02445 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_02455 PF02785 Biotin carboxylase C-terminal domain M1S49_02455 PF00289 Biotin carboxylase, N-terminal domain M1S49_02455 PF00364 Biotin-requiring enzyme M1S49_02455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S49_02465 PF04386 Stringent starvation protein B M1S49_02470 PF00043 Glutathione S-transferase, C-terminal domain M1S49_02470 PF13417 Glutathione S-transferase, N-terminal domain M1S49_02475 PF00380 Ribosomal protein S9/S16 M1S49_02480 PF00572 Ribosomal protein L13 M1S49_02485 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M1S49_02490 PF00398 Ribosomal RNA adenine dimethylase M1S49_02495 PF00149 Calcineurin-like phosphoesterase M1S49_02515 PF16360 GTP-binding GTPase Middle Region M1S49_02515 PF13167 GTP-binding GTPase N-terminal M1S49_02515 PF01926 50S ribosome-binding GTPase M1S49_02525 PF13091 PLD-like domain M1S49_02530 PF00149 Calcineurin-like phosphoesterase M1S49_02530 PF10518 TAT (twin-arginine translocation) pathway signal sequence M1S49_02535 PF01389 OmpA-like transmembrane domain M1S49_02535 PF00691 OmpA family M1S49_02540 PF00990 Diguanylate cyclase, GGDEF domain M1S49_02540 PF17152 Periplasmic sensor domain M1S49_02575 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_02575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S49_02585 PF04273 Putative phosphatase (DUF442) M1S49_02585 PF00753 Metallo-beta-lactamase superfamily M1S49_02590 PF00561 alpha/beta hydrolase fold M1S49_02595 PF00085 Thioredoxin M1S49_02600 PF03061 Thioesterase superfamily M1S49_02610 PF04461 Protein of unknown function (DUF520) M1S49_02620 PF01266 FAD dependent oxidoreductase M1S49_02620 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S49_02630 PF03795 YCII-related domain M1S49_02635 PF04279 Intracellular septation protein A M1S49_02640 PF02811 PHP domain M1S49_02645 PF01062 Bestrophin, RFP-TM, chloride channel M1S49_02650 PF04002 RadC-like JAB domain M1S49_02655 PF04127 DNA / pantothenate metabolism flavoprotein M1S49_02655 PF02441 Flavoprotein M1S49_02660 PF07549 SecD/SecF GG Motif M1S49_02660 PF02355 Protein export membrane protein M1S49_02665 PF07549 SecD/SecF GG Motif M1S49_02665 PF13721 SecD export protein N-terminal TM region M1S49_02665 PF02355 Protein export membrane protein M1S49_02670 PF02699 Preprotein translocase subunit M1S49_02675 PF01702 Queuine tRNA-ribosyltransferase M1S49_02690 PF02547 Queuosine biosynthesis protein M1S49_02720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_02720 PF00512 His Kinase A (phospho-acceptor) domain M1S49_02720 PF07689 KaiB domain M1S49_02725 PF08335 GlnD PII-uridylyltransferase M1S49_02725 PF03710 Glutamate-ammonia ligase adenylyltransferase M1S49_02730 PF01063 Amino-transferase class IV M1S49_02745 PF01522 Polysaccharide deacetylase M1S49_02750 PF00535 Glycosyl transferase family 2 M1S49_02755 PF00534 Glycosyl transferases group 1 M1S49_02755 PF13439 Glycosyltransferase Family 4 M1S49_02780 PF17101 Stealth protein CR1, conserved region 1 M1S49_02780 PF17102 Stealth protein CR3, conserved region 3 M1S49_02780 PF11380 Stealth protein CR2, conserved region 2 M1S49_02785 PF01336 OB-fold nucleic acid binding domain M1S49_02785 PF00152 tRNA synthetases class II (D, K and N) M1S49_02785 PF02938 GAD domain M1S49_02795 PF00593 TonB dependent receptor M1S49_02795 PF07715 TonB-dependent Receptor Plug Domain M1S49_02815 PF06146 Phosphate-starvation-inducible E M1S49_02820 PF02798 Glutathione S-transferase, N-terminal domain M1S49_02820 PF00043 Glutathione S-transferase, C-terminal domain M1S49_02825 PF03466 LysR substrate binding domain M1S49_02825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_02830 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S49_02830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_02830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_02830 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_02835 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S49_02835 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_02835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_02835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_02845 PF00512 His Kinase A (phospho-acceptor) domain M1S49_02845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_02845 PF00672 HAMP domain M1S49_02850 PF00486 Transcriptional regulatory protein, C terminal M1S49_02850 PF00072 Response regulator receiver domain M1S49_02855 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M1S49_02875 PF01923 Cobalamin adenosyltransferase M1S49_02880 PF07715 TonB-dependent Receptor Plug Domain M1S49_02880 PF00593 TonB dependent receptor M1S49_02885 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M1S49_02890 PF00291 Pyridoxal-phosphate dependent enzyme M1S49_02915 PF00290 Tryptophan synthase alpha chain M1S49_02920 PF01039 Carboxyl transferase domain M1S49_02925 PF08245 Mur ligase middle domain M1S49_02925 PF02875 Mur ligase family, glutamate ligase domain M1S49_02940 PF00753 Metallo-beta-lactamase superfamily M1S49_02945 PF00578 AhpC/TSA family M1S49_02945 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S49_02950 PF07516 SecA Wing and Scaffold domain M1S49_02950 PF01043 SecA preprotein cross-linking domain M1S49_02950 PF07517 SecA DEAD-like domain M1S49_02950 PF02810 SEC-C motif M1S49_02960 PF00083 Sugar (and other) transporter M1S49_02960 PF07690 Major Facilitator Superfamily M1S49_02965 PF03006 Haemolysin-III related M1S49_02990 PF00378 Enoyl-CoA hydratase/isomerase M1S49_02990 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S49_02990 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S49_02995 PF02803 Thiolase, C-terminal domain M1S49_02995 PF00108 Thiolase, N-terminal domain M1S49_03000 PF12833 Helix-turn-helix domain M1S49_03000 PF02311 AraC-like ligand binding domain M1S49_03005 PF02515 CoA-transferase family III M1S49_03010 PF04966 Carbohydrate-selective porin, OprB family M1S49_03015 PF01011 PQQ enzyme repeat M1S49_03020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S49_03020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S49_03030 PF00893 Small Multidrug Resistance protein M1S49_03040 PF02803 Thiolase, C-terminal domain M1S49_03040 PF00108 Thiolase, N-terminal domain M1S49_03050 PF13505 Outer membrane protein beta-barrel domain M1S49_03050 PF00691 OmpA family M1S49_03060 PF01139 tRNA-splicing ligase RtcB M1S49_03065 PF00324 Amino acid permease M1S49_03070 PF05175 Methyltransferase small domain M1S49_03070 PF08468 Methyltransferase small domain N-terminal M1S49_03075 PF00860 Permease family M1S49_03080 PF00679 Elongation factor G C-terminus M1S49_03080 PF00009 Elongation factor Tu GTP binding domain M1S49_03080 PF03144 Elongation factor Tu domain 2 M1S49_03085 PF01741 Large-conductance mechanosensitive channel, MscL M1S49_03100 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M1S49_03100 PF06827 Zinc finger found in FPG and IleRS M1S49_03100 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M1S49_03105 PF02245 Methylpurine-DNA glycosylase (MPG) M1S49_03125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S49_03140 PF13098 Thioredoxin-like domain M1S49_03140 PF10411 Disulfide bond isomerase protein N-terminus M1S49_03145 PF01571 Aminomethyltransferase folate-binding domain M1S49_03155 PF04343 Protein of unknown function, DUF488 M1S49_03160 PF08274 PhnA Zinc-Ribbon M1S49_03160 PF03831 PhnA domain M1S49_03165 PF07411 Domain of unknown function (DUF1508) M1S49_03170 PF03129 Anticodon binding domain M1S49_03170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S49_03170 PF04073 Aminoacyl-tRNA editing domain M1S49_03175 PF00873 AcrB/AcrD/AcrF family M1S49_03190 PF00072 Response regulator receiver domain M1S49_03195 PF00072 Response regulator receiver domain M1S49_03200 PF01584 CheW-like domain M1S49_03205 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M1S49_03205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M1S49_03210 PF01584 CheW-like domain M1S49_03210 PF01627 Hpt domain M1S49_03210 PF00072 Response regulator receiver domain M1S49_03210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_03220 PF07687 Peptidase dimerisation domain M1S49_03220 PF01546 Peptidase family M20/M25/M40 M1S49_03225 PF08085 Entericidin EcnA/B family M1S49_03235 PF04304 Protein of unknown function (DUF454) M1S49_03240 PF17969 L,D-transpeptidase C-terminal domain M1S49_03240 PF03734 L,D-transpeptidase catalytic domain M1S49_03280 PF00667 FAD binding domain M1S49_03280 PF00258 Flavodoxin M1S49_03280 PF00175 Oxidoreductase NAD-binding domain M1S49_03290 PF12805 FUSC-like inner membrane protein yccS M1S49_03295 PF07690 Major Facilitator Superfamily M1S49_03300 PF00881 Nitroreductase family M1S49_03315 PF01235 Sodium:alanine symporter family M1S49_03320 PF01734 Patatin-like phospholipase M1S49_03325 PF13291 ACT domain M1S49_03325 PF00291 Pyridoxal-phosphate dependent enzyme M1S49_03330 PF05992 SbmA/BacA-like family M1S49_03360 PF02934 GatB/GatE catalytic domain M1S49_03360 PF02637 GatB domain M1S49_03365 PF01425 Amidase M1S49_03370 PF02686 Glu-tRNAGln amidotransferase C subunit M1S49_03380 PF04085 rod shape-determining protein MreC M1S49_03385 PF04093 rod shape-determining protein MreD M1S49_03390 PF02545 Maf-like protein M1S49_03395 PF00575 S1 RNA binding domain M1S49_03395 PF10150 Ribonuclease E/G family M1S49_03405 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain M1S49_03405 PF06974 Protein of unknown function (DUF1298) M1S49_03410 PF01507 Phosphoadenosine phosphosulfate reductase family M1S49_03425 PF02525 Flavodoxin-like fold M1S49_03445 PF02673 Bacitracin resistance protein BacA M1S49_03450 PF12833 Helix-turn-helix domain M1S49_03450 PF06719 AraC-type transcriptional regulator N-terminus M1S49_03455 PF14765 Polyketide synthase dehydratase M1S49_03455 PF00550 Phosphopantetheine attachment site M1S49_03455 PF08990 Erythronolide synthase docking M1S49_03455 PF09277 Erythronolide synthase, docking M1S49_03455 PF00698 Acyl transferase domain M1S49_03455 PF16197 Ketoacyl-synthetase C-terminal extension M1S49_03455 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S49_03455 PF08240 Alcohol dehydrogenase GroES-like domain M1S49_03455 PF08659 KR domain M1S49_03455 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S49_03460 PF01965 DJ-1/PfpI family M1S49_03470 PF00324 Amino acid permease M1S49_03475 PF04303 PrpF protein M1S49_03480 PF00348 Polyprenyl synthetase M1S49_03485 PF04237 YjbR M1S49_03490 PF01145 SPFH domain / Band 7 family M1S49_03500 PF01734 Patatin-like phospholipase M1S49_03520 PF08019 Phosphoethanolamine transferase EptA/EptB M1S49_03520 PF00884 Sulfatase M1S49_03525 PF00072 Response regulator receiver domain M1S49_03525 PF00486 Transcriptional regulatory protein, C terminal M1S49_03530 PF08521 Two-component sensor kinase N-terminal M1S49_03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_03530 PF00512 His Kinase A (phospho-acceptor) domain M1S49_03540 PF00909 Ammonium Transporter Family M1S49_03545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_03545 PF03466 LysR substrate binding domain M1S49_03565 PF00133 tRNA synthetases class I (I, L, M and V) M1S49_03565 PF10458 Valyl tRNA synthetase tRNA binding arm M1S49_03565 PF08264 Anticodon-binding domain of tRNA M1S49_03585 PF01906 Putative heavy-metal-binding M1S49_03590 PF01906 Putative heavy-metal-binding M1S49_03595 PF02321 Outer membrane efflux protein M1S49_03600 PF00873 AcrB/AcrD/AcrF family M1S49_03605 PF00529 HlyD membrane-fusion protein of T1SS M1S49_03605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S49_03610 PF01569 PAP2 superfamily M1S49_03620 PF00348 Polyprenyl synthetase M1S49_03630 PF00829 Ribosomal prokaryotic L21 protein M1S49_03635 PF01016 Ribosomal L27 protein M1S49_03640 PF03548 Outer membrane lipoprotein carrier protein LolA M1S49_03650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S49_03650 PF02403 Seryl-tRNA synthetase N-terminal domain M1S49_03655 PF10414 Sirohaem synthase dimerisation region M1S49_03655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S49_03655 PF14824 Sirohaem biosynthesis protein central M1S49_03660 PF00588 SpoU rRNA Methylase family M1S49_03665 PF01638 HxlR-like helix-turn-helix M1S49_03670 PF03358 NADPH-dependent FMN reductase M1S49_03675 PF13520 Amino acid permease M1S49_03680 PF00465 Iron-containing alcohol dehydrogenase M1S49_03690 PF03099 Biotin/lipoate A/B protein ligase family M1S49_03695 PF04359 Protein of unknown function (DUF493) M1S49_03700 PF04546 Sigma-70, non-essential region M1S49_03700 PF03979 Sigma-70 factor, region 1.1 M1S49_03700 PF00140 Sigma-70 factor, region 1.2 M1S49_03700 PF04542 Sigma-70 region 2 M1S49_03700 PF04539 Sigma-70 region 3 M1S49_03700 PF04545 Sigma-70, region 4 M1S49_03720 PF17773 UPF0176 acylphosphatase like domain M1S49_03720 PF00581 Rhodanese-like domain M1S49_03730 PF00285 Citrate synthase, C-terminal domain M1S49_03735 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S49_03740 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S49_03745 PF00890 FAD binding domain M1S49_03745 PF02910 Fumarate reductase flavoprotein C-term M1S49_03750 PF13085 2Fe-2S iron-sulfur cluster binding domain M1S49_03765 PF02779 Transketolase, pyrimidine binding domain M1S49_03765 PF16870 2-oxoglutarate dehydrogenase C-terminal M1S49_03765 PF00676 Dehydrogenase E1 component M1S49_03765 PF16078 2-oxoglutarate dehydrogenase N-terminus M1S49_03770 PF02817 e3 binding domain M1S49_03770 PF00364 Biotin-requiring enzyme M1S49_03770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S49_03775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S49_03775 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_03780 PF08442 ATP-grasp domain M1S49_03780 PF00549 CoA-ligase M1S49_03785 PF02629 CoA binding domain M1S49_03785 PF00549 CoA-ligase M1S49_03790 PF00579 tRNA synthetases class I (W and Y) M1S49_03795 PF05661 Protein of unknown function (DUF808) M1S49_03800 PF04228 Putative neutral zinc metallopeptidase M1S49_03805 PF00999 Sodium/hydrogen exchanger family M1S49_03820 PF09587 Bacterial capsule synthesis protein PGA_cap M1S49_03830 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S49_03835 PF00582 Universal stress protein family M1S49_03840 PF00132 Bacterial transferase hexapeptide (six repeats) M1S49_03845 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S49_03845 PF03449 Transcription elongation factor, N-terminal M1S49_03850 PF02142 MGS-like domain M1S49_03850 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M1S49_03850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S49_03855 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M1S49_03855 PF00117 Glutamine amidotransferase class-I M1S49_03870 PF01985 CRS1 / YhbY (CRM) domain M1S49_03875 PF01728 FtsJ-like methyltransferase M1S49_03880 PF00004 ATPase family associated with various cellular activities (AAA) M1S49_03880 PF17862 AAA+ lid domain M1S49_03880 PF06480 FtsH Extracellular M1S49_03880 PF01434 Peptidase family M41 M1S49_03885 PF00809 Pterin binding enzyme M1S49_03905 PF09423 PhoD-like phosphatase M1S49_03905 PF16655 PhoD-like phosphatase, N-terminal domain M1S49_03920 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M1S49_03920 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M1S49_03935 PF00083 Sugar (and other) transporter M1S49_03940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1S49_03940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1S49_03945 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M1S49_03945 PF01266 FAD dependent oxidoreductase M1S49_03950 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1S49_03950 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1S49_03955 PF00781 Diacylglycerol kinase catalytic domain M1S49_03960 PF00149 Calcineurin-like phosphoesterase M1S49_03970 PF00166 Chaperonin 10 Kd subunit M1S49_03975 PF00118 TCP-1/cpn60 chaperonin family M1S49_03980 PF01219 Prokaryotic diacylglycerol kinase M1S49_03985 PF00753 Metallo-beta-lactamase superfamily M1S49_03990 PF03009 Glycerophosphoryl diester phosphodiesterase family M1S49_03995 PF00873 AcrB/AcrD/AcrF family M1S49_04005 PF01435 Peptidase family M48 M1S49_04010 PF01464 Transglycosylase SLT domain M1S49_04015 PF01171 PP-loop family M1S49_04025 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S49_04025 PF01464 Transglycosylase SLT domain M1S49_04030 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S49_04030 PF03449 Transcription elongation factor, N-terminal M1S49_04045 PF00975 Thioesterase domain M1S49_04045 PF00668 Condensation domain M1S49_04045 PF13193 AMP-binding enzyme C-terminal domain M1S49_04045 PF00501 AMP-binding enzyme M1S49_04045 PF00550 Phosphopantetheine attachment site M1S49_04075 PF00881 Nitroreductase family M1S49_04090 PF02595 Glycerate kinase family M1S49_04095 PF00384 Molybdopterin oxidoreductase M1S49_04100 PF02634 FdhD/NarQ family M1S49_04105 PF06803 Protein of unknown function (DUF1232) M1S49_04110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S49_04110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S49_04110 PF11890 Domain of unknown function (DUF3410) M1S49_04115 PF00152 tRNA synthetases class II (D, K and N) M1S49_04125 PF18073 Rubredoxin metal binding domain M1S49_04130 PF00324 Amino acid permease M1S49_04140 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M1S49_04140 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M1S49_04145 PF01678 Diaminopimelate epimerase M1S49_04150 PF01810 LysE type translocator M1S49_04155 PF02899 Phage integrase, N-terminal SAM-like domain M1S49_04155 PF00589 Phage integrase family M1S49_04160 PF01012 Electron transfer flavoprotein domain M1S49_04165 PF01012 Electron transfer flavoprotein domain M1S49_04165 PF00766 Electron transfer flavoprotein FAD-binding domain M1S49_04170 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S49_04170 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S49_04185 PF00535 Glycosyl transferase family 2 M1S49_04205 PF13533 Biotin-lipoyl like M1S49_04215 PF00266 Aminotransferase class-V M1S49_04230 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M1S49_04240 PF02687 FtsX-like permease family M1S49_04240 PF12704 MacB-like periplasmic core domain M1S49_04245 PF00005 ABC transporter M1S49_04250 PF00753 Metallo-beta-lactamase superfamily M1S49_04250 PF13567 Domain of unknown function (DUF4131) M1S49_04250 PF03772 Competence protein M1S49_04260 PF01343 Peptidase family S49 M1S49_04260 PF06965 Na+/H+ antiporter 1 M1S49_04265 PF12697 Alpha/beta hydrolase family M1S49_04270 PF00551 Formyl transferase M1S49_04275 PF02769 AIR synthase related protein, C-terminal domain M1S49_04275 PF00586 AIR synthase related protein, N-terminal domain M1S49_04280 PF01594 AI-2E family transporter M1S49_04285 PF00308 Bacterial dnaA protein M1S49_04285 PF08299 Bacterial dnaA protein helix-turn-helix M1S49_04285 PF11638 DnaA N-terminal domain M1S49_04315 PF00588 SpoU rRNA Methylase family M1S49_04315 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S49_04320 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M1S49_04330 PF00691 OmpA family M1S49_04335 PF04052 TolB amino-terminal domain M1S49_04335 PF07676 WD40-like Beta Propeller Repeat M1S49_04345 PF02472 Biopolymer transport protein ExbD/TolR M1S49_04350 PF01618 MotA/TolQ/ExbB proton channel family M1S49_04355 PF03061 Thioesterase superfamily M1S49_04360 PF07687 Peptidase dimerisation domain M1S49_04360 PF01546 Peptidase family M20/M25/M40 M1S49_04365 PF05496 Holliday junction DNA helicase RuvB P-loop domain M1S49_04365 PF17864 RuvB AAA lid domain M1S49_04365 PF05491 RuvB C-terminal winged helix domain M1S49_04370 PF07499 RuvA, C-terminal domain M1S49_04370 PF01330 RuvA N terminal domain M1S49_04375 PF01966 HD domain M1S49_04380 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M1S49_04380 PF02769 AIR synthase related protein, C-terminal domain M1S49_04380 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M1S49_04385 PF07690 Major Facilitator Superfamily M1S49_04390 PF01784 NIF3 (NGG1p interacting factor 3) M1S49_04395 PF00378 Enoyl-CoA hydratase/isomerase M1S49_04400 PF01467 Cytidylyltransferase-like M1S49_04400 PF00293 NUDIX domain M1S49_04410 PF00578 AhpC/TSA family M1S49_04425 PF06508 Queuosine biosynthesis protein QueC M1S49_04435 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M1S49_04435 PF00132 Bacterial transferase hexapeptide (six repeats) M1S49_04435 PF14602 Hexapeptide repeat of succinyl-transferase M1S49_04445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_04445 PF03466 LysR substrate binding domain M1S49_04450 PF12857 TOBE-like domain M1S49_04450 PF00005 ABC transporter M1S49_04455 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_04460 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_04475 PF01063 Amino-transferase class IV M1S49_04480 PF02618 YceG-like family M1S49_04485 PF02223 Thymidylate kinase M1S49_04495 PF02910 Fumarate reductase flavoprotein C-term M1S49_04495 PF00890 FAD binding domain M1S49_04500 PF13180 PDZ domain M1S49_04510 PF03144 Elongation factor Tu domain 2 M1S49_04510 PF00009 Elongation factor Tu GTP binding domain M1S49_04510 PF00679 Elongation factor G C-terminus M1S49_04510 PF06421 GTP-binding protein LepA C-terminus M1S49_04515 PF10502 Signal peptidase, peptidase S26 M1S49_04525 PF00035 Double-stranded RNA binding motif M1S49_04525 PF14622 Ribonuclease-III-like M1S49_04530 PF07650 KH domain M1S49_04530 PF01926 50S ribosome-binding GTPase M1S49_04540 PF02565 Recombination protein O C terminal M1S49_04540 PF11967 Recombination protein O N terminal M1S49_04545 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M1S49_04550 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M1S49_04555 PF00106 short chain dehydrogenase M1S49_04585 PF00155 Aminotransferase class I and II M1S49_04595 PF00990 Diguanylate cyclase, GGDEF domain M1S49_04595 PF17151 Periplasmic sensor domain M1S49_04605 PF02151 UvrB/uvrC motif M1S49_04605 PF04851 Type III restriction enzyme, res subunit M1S49_04605 PF17757 UvrB interaction domain M1S49_04605 PF00271 Helicase conserved C-terminal domain M1S49_04605 PF12344 Ultra-violet resistance protein B M1S49_04615 PF00892 EamA-like transporter family M1S49_04620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S49_04620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S49_04635 PF01926 50S ribosome-binding GTPase M1S49_04635 PF01018 GTP1/OBG M1S49_04640 PF00696 Amino acid kinase family M1S49_04640 PF01472 PUA domain M1S49_04650 PF07759 Protein of unknown function (DUF1615) M1S49_04985 PF00589 Phage integrase family M1S49_04990 PF01207 Dihydrouridine synthase (Dus) M1S49_04995 PF03060 Nitronate monooxygenase M1S49_05010 PF02350 UDP-N-acetylglucosamine 2-epimerase M1S49_05040 PF00875 DNA photolyase M1S49_05040 PF03441 FAD binding domain of DNA photolyase M1S49_05045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S49_05050 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_05055 PF00768 D-alanyl-D-alanine carboxypeptidase M1S49_05055 PF07943 Penicillin-binding protein 5, C-terminal domain M1S49_05065 PF03971 Monomeric isocitrate dehydrogenase M1S49_05070 PF00849 RNA pseudouridylate synthase M1S49_05075 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S49_05095 PF06779 Uncharacterised MFS-type transporter YbfB M1S49_05100 PF03466 LysR substrate binding domain M1S49_05100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_05105 PF00375 Sodium:dicarboxylate symporter family M1S49_05110 PF02567 Phenazine biosynthesis-like protein M1S49_05140 PF02581 Thiamine monophosphate synthase M1S49_05145 PF00202 Aminotransferase class-III M1S49_05155 PF00849 RNA pseudouridylate synthase M1S49_05160 PF18337 RapA N-terminal Tudor like domain M1S49_05160 PF00176 SNF2 family N-terminal domain M1S49_05160 PF12137 RNA polymerase recycling family C-terminal M1S49_05160 PF00271 Helicase conserved C-terminal domain M1S49_05160 PF18339 RapA N-terminal Tudor like domain 1 M1S49_05170 PF00440 Bacterial regulatory proteins, tetR family M1S49_05175 PF00970 Oxidoreductase FAD-binding domain M1S49_05175 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S49_05175 PF00175 Oxidoreductase NAD-binding domain M1S49_05180 PF00487 Fatty acid desaturase M1S49_05190 PF17754 MftR C-terminal domain M1S49_05190 PF00440 Bacterial regulatory proteins, tetR family M1S49_05200 PF00202 Aminotransferase class-III M1S49_05205 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S49_05210 PF00171 Aldehyde dehydrogenase family M1S49_05215 PF01037 Lrp/AsnC ligand binding domain M1S49_05220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S49_05220 PF00205 Thiamine pyrophosphate enzyme, central domain M1S49_05220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S49_05225 PF00324 Amino acid permease M1S49_05235 PF00905 Penicillin binding protein transpeptidase domain M1S49_05245 PF12849 PBP superfamily domain M1S49_05250 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_05255 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_05260 PF00005 ABC transporter M1S49_05265 PF01343 Peptidase family S49 M1S49_05265 PF08496 Peptidase family S49 N-terminal M1S49_05280 PF08328 Adenylosuccinate lyase C-terminal M1S49_05280 PF00206 Lyase M1S49_05285 PF04356 Protein of unknown function (DUF489) M1S49_05295 PF13344 Haloacid dehalogenase-like hydrolase M1S49_05295 PF00293 NUDIX domain M1S49_05300 PF00132 Bacterial transferase hexapeptide (six repeats) M1S49_05305 PF07943 Penicillin-binding protein 5, C-terminal domain M1S49_05305 PF00768 D-alanyl-D-alanine carboxypeptidase M1S49_05320 PF01975 Survival protein SurE M1S49_05325 PF01551 Peptidase family M23 M1S49_05325 PF01476 LysM domain M1S49_05330 PF03466 LysR substrate binding domain M1S49_05330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_05335 PF13654 AAA domain M1S49_05335 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S49_05340 PF07690 Major Facilitator Superfamily M1S49_05345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S49_05350 PF13593 SBF-like CPA transporter family (DUF4137) M1S49_05355 PF01197 Ribosomal protein L31 M1S49_05370 PF04055 Radical SAM superfamily M1S49_05375 PF01132 Elongation factor P (EF-P) OB domain M1S49_05375 PF08207 Elongation factor P (EF-P) KOW-like domain M1S49_05375 PF09285 Elongation factor P, C-terminal M1S49_05380 PF02554 Carbon starvation protein CstA M1S49_05380 PF13722 5TM C-terminal transporter carbon starvation CstA M1S49_05385 PF04328 Selenoprotein, putative M1S49_05420 PF06018 CodY GAF-like domain M1S49_05420 PF17853 GGDEF-like domain M1S49_05420 PF13556 PucR C-terminal helix-turn-helix domain M1S49_05435 PF00171 Aldehyde dehydrogenase family M1S49_05440 PF00324 Amino acid permease M1S49_05445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_05445 PF03466 LysR substrate binding domain M1S49_05450 PF02028 BCCT, betaine/carnitine/choline family transporter M1S49_05455 PF02028 BCCT, betaine/carnitine/choline family transporter M1S49_05460 PF00355 Rieske [2Fe-2S] domain M1S49_05460 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S49_05465 PF00171 Aldehyde dehydrogenase family M1S49_05475 PF18113 Rubredoxin binding C-terminal domain M1S49_05475 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_05480 PF01266 FAD dependent oxidoreductase M1S49_05480 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S49_05500 PF00892 EamA-like transporter family M1S49_05510 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M1S49_05515 PF00083 Sugar (and other) transporter M1S49_05520 PF13378 Enolase C-terminal domain-like M1S49_05520 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S49_05525 PF08990 Erythronolide synthase docking M1S49_05525 PF16197 Ketoacyl-synthetase C-terminal extension M1S49_05525 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S49_05525 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S49_05525 PF08659 KR domain M1S49_05525 PF00550 Phosphopantetheine attachment site M1S49_05525 PF14765 Polyketide synthase dehydratase M1S49_05525 PF08240 Alcohol dehydrogenase GroES-like domain M1S49_05525 PF00698 Acyl transferase domain M1S49_05525 PF09277 Erythronolide synthase, docking M1S49_05530 PF00440 Bacterial regulatory proteins, tetR family M1S49_05550 PF02678 Pirin M1S49_05550 PF17954 Quercetinase C-terminal cupin domain M1S49_05560 PF13309 HTH domain M1S49_05560 PF08348 YheO-like PAS domain M1S49_05570 PF00501 AMP-binding enzyme M1S49_05570 PF13193 AMP-binding enzyme C-terminal domain M1S49_05570 PF00550 Phosphopantetheine attachment site M1S49_05570 PF00668 Condensation domain M1S49_05575 PF00975 Thioesterase domain M1S49_05575 PF00550 Phosphopantetheine attachment site M1S49_05575 PF00668 Condensation domain M1S49_05575 PF13193 AMP-binding enzyme C-terminal domain M1S49_05575 PF00501 AMP-binding enzyme M1S49_05580 PF01032 FecCD transport family M1S49_05585 PF01032 FecCD transport family M1S49_05590 PF00005 ABC transporter M1S49_05595 PF01497 Periplasmic binding protein M1S49_05600 PF07715 TonB-dependent Receptor Plug Domain M1S49_05600 PF00593 TonB dependent receptor M1S49_05605 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S49_05610 PF00501 AMP-binding enzyme M1S49_05610 PF00668 Condensation domain M1S49_05610 PF00550 Phosphopantetheine attachment site M1S49_05615 PF13193 AMP-binding enzyme C-terminal domain M1S49_05615 PF00501 AMP-binding enzyme M1S49_05620 PF00550 Phosphopantetheine attachment site M1S49_05620 PF00857 Isochorismatase family M1S49_05625 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S49_05635 PF00005 ABC transporter M1S49_05640 PF00005 ABC transporter M1S49_05645 PF00975 Thioesterase domain M1S49_05655 PF00425 chorismate binding enzyme M1S49_05665 PF01208 Uroporphyrinogen decarboxylase (URO-D) M1S49_05670 PF05675 Protein of unknown function (DUF817) M1S49_05685 PF00144 Beta-lactamase M1S49_05695 PF01227 GTP cyclohydrolase I M1S49_05700 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S49_05700 PF01799 [2Fe-2S] binding domain M1S49_05705 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M1S49_05705 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M1S49_05720 PF00218 Indole-3-glycerol phosphate synthase M1S49_05725 PF02885 Glycosyl transferase family, helical bundle domain M1S49_05725 PF00591 Glycosyl transferase family, a/b domain M1S49_05730 PF00593 TonB dependent receptor M1S49_05730 PF07715 TonB-dependent Receptor Plug Domain M1S49_05735 PF11838 ERAP1-like C-terminal domain M1S49_05735 PF01433 Peptidase family M1 domain M1S49_05740 PF00117 Glutamine amidotransferase class-I M1S49_05750 PF00854 POT family M1S49_05755 PF00120 Glutamine synthetase, catalytic domain M1S49_05755 PF03951 Glutamine synthetase, beta-Grasp domain M1S49_05760 PF04345 Chorismate lyase M1S49_05765 PF01040 UbiA prenyltransferase family M1S49_05800 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M1S49_05800 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M1S49_05805 PF01784 NIF3 (NGG1p interacting factor 3) M1S49_05810 PF13180 PDZ domain M1S49_05815 PF01743 Poly A polymerase head domain M1S49_05815 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S49_05820 PF00390 Malic enzyme, N-terminal domain M1S49_05820 PF03949 Malic enzyme, NAD binding domain M1S49_05820 PF01515 Phosphate acetyl/butaryl transferase M1S49_05825 PF00563 EAL domain M1S49_05825 PF00990 Diguanylate cyclase, GGDEF domain M1S49_05825 PF03707 Bacterial signalling protein N terminal repeat M1S49_05830 PF04452 RNA methyltransferase M1S49_05835 PF02219 Methylenetetrahydrofolate reductase M1S49_05840 PF05221 S-adenosyl-L-homocysteine hydrolase M1S49_05840 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M1S49_05855 PF09317 Domain of unknown function (DUF1974) M1S49_05855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_05855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_05860 PF04055 Radical SAM superfamily M1S49_05865 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_05865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S49_05875 PF07690 Major Facilitator Superfamily M1S49_05885 PF00557 Metallopeptidase family M24 M1S49_05890 PF00318 Ribosomal protein S2 M1S49_05895 PF00889 Elongation factor TS M1S49_05905 PF12833 Helix-turn-helix domain M1S49_05925 PF03330 Lytic transglycolase M1S49_05925 PF05036 Sporulation related domain M1S49_05930 PF13406 Transglycosylase SLT domain M1S49_05935 PF01098 Cell cycle protein M1S49_05945 PF14489 QueF-like protein M1S49_05945 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M1S49_05950 PF01061 ABC-2 type transporter M1S49_05955 PF00005 ABC transporter M1S49_05985 PF00464 Serine hydroxymethyltransferase M1S49_05990 PF02321 Outer membrane efflux protein M1S49_05995 PF00873 AcrB/AcrD/AcrF family M1S49_06000 PF13533 Biotin-lipoyl like M1S49_06005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_06005 PF03466 LysR substrate binding domain M1S49_06010 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S49_06015 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_06020 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_06025 PF00005 ABC transporter M1S49_06030 PF00893 Small Multidrug Resistance protein M1S49_06035 PF00037 4Fe-4S binding domain M1S49_06040 PF01136 Peptidase family U32 M1S49_06040 PF16325 Peptidase family U32 C-terminal domain M1S49_06045 PF00155 Aminotransferase class I and II M1S49_06045 PF00392 Bacterial regulatory proteins, gntR family M1S49_06050 PF02567 Phenazine biosynthesis-like protein M1S49_06055 PF00970 Oxidoreductase FAD-binding domain M1S49_06055 PF00175 Oxidoreductase NAD-binding domain M1S49_06060 PF01980 tRNA-methyltransferase O M1S49_06060 PF18389 TrmO C-terminal domain M1S49_06070 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S49_06070 PF00437 Type II/IV secretion system protein M1S49_06080 PF00486 Transcriptional regulatory protein, C terminal M1S49_06080 PF00072 Response regulator receiver domain M1S49_06085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_06085 PF08521 Two-component sensor kinase N-terminal M1S49_06085 PF00512 His Kinase A (phospho-acceptor) domain M1S49_06095 PF00293 NUDIX domain M1S49_06105 PF00912 Transglycosylase M1S49_06105 PF14814 Bifunctional transglycosylase second domain M1S49_06105 PF00905 Penicillin binding protein transpeptidase domain M1S49_06110 PF01513 ATP-NAD kinase M1S49_06115 PF07023 Protein of unknown function (DUF1315) M1S49_06120 PF02885 Glycosyl transferase family, helical bundle domain M1S49_06120 PF00591 Glycosyl transferase family, a/b domain M1S49_06125 PF00375 Sodium:dicarboxylate symporter family M1S49_06130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_06130 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_06130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_06135 PF00756 Putative esterase M1S49_06140 PF00800 Prephenate dehydratase M1S49_06140 PF01817 Chorismate mutase type II M1S49_06140 PF01842 ACT domain M1S49_06145 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S49_06155 PF07687 Peptidase dimerisation domain M1S49_06155 PF01546 Peptidase family M20/M25/M40 M1S49_06160 PF12706 Beta-lactamase superfamily domain M1S49_06170 PF03883 Peroxide stress protein YaaA M1S49_06180 PF05690 Thiazole biosynthesis protein ThiG M1S49_06190 PF04241 Protein of unknown function (DUF423) M1S49_06195 PF00140 Sigma-70 factor, region 1.2 M1S49_06195 PF04542 Sigma-70 region 2 M1S49_06195 PF04545 Sigma-70, region 4 M1S49_06210 PF00313 'Cold-shock' DNA-binding domain M1S49_06215 PF00271 Helicase conserved C-terminal domain M1S49_06215 PF00270 DEAD/DEAH box helicase M1S49_06225 PF00881 Nitroreductase family M1S49_06230 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M1S49_06230 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M1S49_06250 PF01180 Dihydroorotate dehydrogenase M1S49_06255 PF02674 Colicin V production protein M1S49_06260 PF00156 Phosphoribosyl transferase domain M1S49_06275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S49_06275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S49_06280 PF01435 Peptidase family M48 M1S49_06285 PF09424 Yqey-like protein M1S49_06290 PF01165 Ribosomal protein S21 M1S49_06295 PF00814 Glycoprotease family M1S49_06315 PF00069 Protein kinase domain M1S49_06340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_06340 PF03466 LysR substrate binding domain M1S49_06345 PF00202 Aminotransferase class-III M1S49_06350 PF00171 Aldehyde dehydrogenase family M1S49_06355 PF00324 Amino acid permease M1S49_06385 PF04076 Bacterial OB fold (BOF) protein M1S49_06410 PF00561 alpha/beta hydrolase fold M1S49_06415 PF03616 Sodium/glutamate symporter M1S49_06425 PF00392 Bacterial regulatory proteins, gntR family M1S49_06425 PF07729 FCD domain M1S49_06475 PF08946 Osmosensory transporter coiled coil M1S49_06475 PF00083 Sugar (and other) transporter M1S49_06500 PF00155 Aminotransferase class I and II M1S49_06505 PF06826 Predicted Permease Membrane Region M1S49_06505 PF02080 TrkA-C domain M1S49_06515 PF04403 Paraquat-inducible protein A M1S49_06520 PF02470 MlaD protein M1S49_06530 PF01177 Asp/Glu/Hydantoin racemase M1S49_06535 PF00892 EamA-like transporter family M1S49_06540 PF07995 Glucose / Sorbosone dehydrogenase M1S49_06550 PF13610 DDE domain M1S49_06560 PF01636 Phosphotransferase enzyme family M1S49_06565 PF13610 DDE domain M1S49_06580 PF00132 Bacterial transferase hexapeptide (six repeats) M1S49_06590 PF00893 Small Multidrug Resistance protein M1S49_06595 PF00809 Pterin binding enzyme M1S49_06610 PF07091 Ribosomal RNA methyltransferase (FmrO) M1S49_06625 PF00005 ABC transporter M1S49_06625 PF12848 ABC transporter M1S49_06630 PF01636 Phosphotransferase enzyme family M1S49_06640 PF13005 zinc-finger binding domain of transposase IS66 M1S49_06640 PF13007 Transposase C of IS166 homeodomain M1S49_06640 PF03050 Transposase IS66 family M1S49_06640 PF13817 IS66 C-terminal element M1S49_06665 PF13610 DDE domain M1S49_06670 PF00171 Aldehyde dehydrogenase family M1S49_06675 PF02627 Carboxymuconolactone decarboxylase family M1S49_06680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_06680 PF03466 LysR substrate binding domain M1S49_06685 PF02525 Flavodoxin-like fold M1S49_06690 PF09339 IclR helix-turn-helix domain M1S49_06690 PF01614 Bacterial transcriptional regulator M1S49_06695 PF01494 FAD binding domain M1S49_06700 PF00392 Bacterial regulatory proteins, gntR family M1S49_06700 PF07702 UTRA domain M1S49_06710 PF08402 TOBE domain M1S49_06710 PF00005 ABC transporter M1S49_06715 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_06720 PF01266 FAD dependent oxidoreductase M1S49_06725 PF00266 Aminotransferase class-V M1S49_06730 PF13419 Haloacid dehalogenase-like hydrolase M1S49_06735 PF07690 Major Facilitator Superfamily M1S49_06740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_06740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_06740 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_06745 PF02515 CoA-transferase family III M1S49_06750 PF09339 IclR helix-turn-helix domain M1S49_06755 PF00378 Enoyl-CoA hydratase/isomerase M1S49_06760 PF03060 Nitronate monooxygenase M1S49_06765 PF07690 Major Facilitator Superfamily M1S49_06770 PF09339 IclR helix-turn-helix domain M1S49_06775 PF02803 Thiolase, C-terminal domain M1S49_06775 PF00108 Thiolase, N-terminal domain M1S49_06780 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S49_06780 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S49_06780 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S49_06790 PF00378 Enoyl-CoA hydratase/isomerase M1S49_06795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_06795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_06795 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_06800 PF07690 Major Facilitator Superfamily M1S49_06805 PF01144 Coenzyme A transferase M1S49_06810 PF01144 Coenzyme A transferase M1S49_06820 PF07690 Major Facilitator Superfamily M1S49_06830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_06830 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_06830 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S49_06830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_06845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_06845 PF03466 LysR substrate binding domain M1S49_06850 PF00682 HMGL-like M1S49_06855 PF00289 Biotin carboxylase, N-terminal domain M1S49_06855 PF02785 Biotin carboxylase C-terminal domain M1S49_06855 PF18140 Propionyl-coenzyme A carboxylase BT domain M1S49_06855 PF00364 Biotin-requiring enzyme M1S49_06855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S49_06860 PF00378 Enoyl-CoA hydratase/isomerase M1S49_06865 PF01039 Carboxyl transferase domain M1S49_06870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_06870 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_06870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_06875 PF00440 Bacterial regulatory proteins, tetR family M1S49_06880 PF00501 AMP-binding enzyme M1S49_06880 PF13193 AMP-binding enzyme C-terminal domain M1S49_06900 PF03466 LysR substrate binding domain M1S49_06900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_06935 PF00994 Probable molybdopterin binding domain M1S49_06935 PF18146 Damage-inducible protein CinA KH domain M1S49_06935 PF02464 Competence-damaged protein M1S49_06945 PF18011 C-terminal domain found in long catalases M1S49_06945 PF00199 Catalase M1S49_06945 PF06628 Catalase-related immune-responsive M1S49_06970 PF00717 Peptidase S24-like M1S49_06980 PF13404 AsnC-type helix-turn-helix domain M1S49_06980 PF01037 Lrp/AsnC ligand binding domain M1S49_06990 PF00512 His Kinase A (phospho-acceptor) domain M1S49_06990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_06990 PF09308 LuxQ, periplasmic M1S49_06990 PF00072 Response regulator receiver domain M1S49_06995 PF00072 Response regulator receiver domain M1S49_07010 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_07015 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_07020 PF00005 ABC transporter M1S49_07025 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S49_07030 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S49_07040 PF03466 LysR substrate binding domain M1S49_07040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_07045 PF01810 LysE type translocator M1S49_07055 PF00266 Aminotransferase class-V M1S49_07065 PF00132 Bacterial transferase hexapeptide (six repeats) M1S49_07070 PF00581 Rhodanese-like domain M1S49_07080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_07080 PF03466 LysR substrate binding domain M1S49_07085 PF02798 Glutathione S-transferase, N-terminal domain M1S49_07090 PF14834 Glutathione S-transferase, C-terminal domain M1S49_07090 PF02798 Glutathione S-transferase, N-terminal domain M1S49_07095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_07095 PF03466 LysR substrate binding domain M1S49_07100 PF03788 LrgA family M1S49_07105 PF04172 LrgB-like family M1S49_07110 PF00155 Aminotransferase class I and II M1S49_07110 PF00392 Bacterial regulatory proteins, gntR family M1S49_07125 PF07690 Major Facilitator Superfamily M1S49_07130 PF16957 Malonate decarboxylase, alpha subunit, transporter M1S49_07135 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M1S49_07140 PF06857 Malonate decarboxylase delta subunit (MdcD) M1S49_07145 PF01039 Carboxyl transferase domain M1S49_07155 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M1S49_07160 PF00698 Acyl transferase domain M1S49_07175 PF03466 LysR substrate binding domain M1S49_07175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_07180 PF00155 Aminotransferase class I and II M1S49_07180 PF00392 Bacterial regulatory proteins, gntR family M1S49_07190 PF02322 Cytochrome bd terminal oxidase subunit II M1S49_07195 PF01654 Cytochrome bd terminal oxidase subunit I M1S49_07205 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S49_07205 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_07205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_07210 PF00296 Luciferase-like monooxygenase M1S49_07215 PF00083 Sugar (and other) transporter M1S49_07225 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S49_07230 PF00005 ABC transporter M1S49_07235 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_07240 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M1S49_07245 PF01177 Asp/Glu/Hydantoin racemase M1S49_07250 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S49_07260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_07260 PF03466 LysR substrate binding domain M1S49_07270 PF13382 Adenine deaminase C-terminal domain M1S49_07270 PF01979 Amidohydrolase family M1S49_07280 PF03960 ArsC family M1S49_07285 PF01022 Bacterial regulatory protein, arsR family M1S49_07290 PF01758 Sodium Bile acid symporter family M1S49_07295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_07295 PF03466 LysR substrate binding domain M1S49_07310 PF13192 Thioredoxin domain M1S49_07310 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_07325 PF00132 Bacterial transferase hexapeptide (six repeats) M1S49_07330 PF00588 SpoU rRNA Methylase family M1S49_07335 PF14579 Helix-hairpin-helix motif M1S49_07335 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S49_07335 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S49_07335 PF02811 PHP domain M1S49_07335 PF01336 OB-fold nucleic acid binding domain M1S49_07340 PF00710 Asparaginase, N-terminal M1S49_07340 PF17763 Glutaminase/Asparaginase C-terminal domain M1S49_07345 PF00375 Sodium:dicarboxylate symporter family M1S49_07350 PF00155 Aminotransferase class I and II M1S49_07355 PF01641 SelR domain M1S49_07360 PF00255 Glutathione peroxidase M1S49_07365 PF12833 Helix-turn-helix domain M1S49_07365 PF12852 Cupin M1S49_07375 PF00155 Aminotransferase class I and II M1S49_07380 PF01966 HD domain M1S49_07380 PF01909 Nucleotidyltransferase domain M1S49_07380 PF08335 GlnD PII-uridylyltransferase M1S49_07385 PF02222 ATP-grasp domain M1S49_07395 PF05437 Branched-chain amino acid transport protein (AzlD) M1S49_07400 PF03591 AzlC protein M1S49_07425 PF01926 50S ribosome-binding GTPase M1S49_07425 PF06071 Protein of unknown function (DUF933) M1S49_07430 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_07435 PF09383 NIL domain M1S49_07435 PF00005 ABC transporter M1S49_07440 PF03180 NLPA lipoprotein M1S49_07445 PF03180 NLPA lipoprotein M1S49_07450 PF00296 Luciferase-like monooxygenase M1S49_07460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_07460 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S49_07475 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_07480 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_07485 PF00005 ABC transporter M1S49_07495 PF01037 Lrp/AsnC ligand binding domain M1S49_07500 PF01709 Transcriptional regulator M1S49_07510 PF00440 Bacterial regulatory proteins, tetR family M1S49_07530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_07530 PF03466 LysR substrate binding domain M1S49_07540 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S49_07550 PF00892 EamA-like transporter family M1S49_07570 PF13953 PapC C-terminal domain M1S49_07570 PF13954 PapC N-terminal domain M1S49_07570 PF00577 Outer membrane usher protein M1S49_07575 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S49_07575 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S49_07580 PF16970 Type-1 fimbrial protein, A M1S49_07595 PF06968 Biotin and Thiamin Synthesis associated domain M1S49_07595 PF04055 Radical SAM superfamily M1S49_07600 PF08331 Domain of unknown function (DUF1730) M1S49_07605 PF01256 Carbohydrate kinase M1S49_07605 PF03853 YjeF-related protein N-terminus M1S49_07610 PF02075 Crossover junction endodeoxyribonuclease RuvC M1S49_07625 PF00905 Penicillin binding protein transpeptidase domain M1S49_07645 PF00438 S-adenosylmethionine synthetase, N-terminal domain M1S49_07645 PF02772 S-adenosylmethionine synthetase, central domain M1S49_07645 PF02773 S-adenosylmethionine synthetase, C-terminal domain M1S49_07650 PF02780 Transketolase, C-terminal domain M1S49_07650 PF00456 Transketolase, thiamine diphosphate binding domain M1S49_07650 PF02779 Transketolase, pyrimidine binding domain M1S49_07660 PF04264 YceI-like domain M1S49_07670 PF09992 Phosphodiester glycosidase M1S49_07680 PF05958 tRNA (Uracil-5-)-methyltransferase M1S49_07685 PF04229 GrpB protein M1S49_07690 PF00171 Aldehyde dehydrogenase family M1S49_07690 PF01619 Proline dehydrogenase M1S49_07690 PF14850 DNA-binding domain of Proline dehydrogenase M1S49_07690 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M1S49_07695 PF01037 Lrp/AsnC ligand binding domain M1S49_07700 PF00474 Sodium:solute symporter family M1S49_07705 PF02146 Sir2 family M1S49_07710 PF01597 Glycine cleavage H-protein M1S49_07715 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S49_07715 PF12833 Helix-turn-helix domain M1S49_07725 PF00005 ABC transporter M1S49_07725 PF00664 ABC transporter transmembrane region M1S49_07730 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M1S49_07735 PF06912 Protein of unknown function (DUF1275) M1S49_07740 PF00375 Sodium:dicarboxylate symporter family M1S49_07755 PF08007 Cupin superfamily protein M1S49_07760 PF02545 Maf-like protein M1S49_07770 PF00162 Phosphoglycerate kinase M1S49_07780 PF01116 Fructose-bisphosphate aldolase class-II M1S49_07785 PF00639 PPIC-type PPIASE domain M1S49_07785 PF09312 SurA N-terminal domain M1S49_07790 PF04453 LPS transport system D M1S49_07790 PF03968 OstA-like protein M1S49_07795 PF01636 Phosphotransferase enzyme family M1S49_07800 PF00483 Nucleotidyl transferase M1S49_07805 PF02527 rRNA small subunit methyltransferase G M1S49_07810 PF13614 AAA domain M1S49_07815 PF02195 ParB-like nuclease domain M1S49_07815 PF17762 HTH domain found in ParB protein M1S49_07820 PF01618 MotA/TolQ/ExbB proton channel family M1S49_07830 PF00664 ABC transporter transmembrane region M1S49_07830 PF00005 ABC transporter M1S49_07835 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M1S49_07840 PF02348 Cytidylyltransferase M1S49_07845 PF09115 DNA polymerase III, delta subunit, C terminal M1S49_07855 PF01026 TatD related DNase M1S49_07870 PF07963 Prokaryotic N-terminal methylation motif M1S49_07870 PF02501 Type II secretion system (T2SS), protein I M1S49_07875 PF07963 Prokaryotic N-terminal methylation motif M1S49_07875 PF11612 Type II secretion system (T2SS), protein J M1S49_07880 PF03934 Type II secretion system (T2SS), protein K M1S49_07890 PF03167 Uracil DNA glycosylase superfamily M1S49_07900 PF14437 MafB19-like deaminase M1S49_07910 PF02224 Cytidylate kinase M1S49_07915 PF00575 S1 RNA binding domain M1S49_07920 PF00216 Bacterial DNA-binding protein M1S49_07930 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M1S49_07950 PF03969 AFG1-like ATPase M1S49_07955 PF01274 Malate synthase M1S49_07965 PF02472 Biopolymer transport protein ExbD/TolR M1S49_07970 PF02472 Biopolymer transport protein ExbD/TolR M1S49_07975 PF01618 MotA/TolQ/ExbB proton channel family M1S49_07985 PF07715 TonB-dependent Receptor Plug Domain M1S49_07985 PF00593 TonB dependent receptor M1S49_08005 PF01432 Peptidase family M3 M1S49_08010 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_08015 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_08020 PF00005 ABC transporter M1S49_08020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S49_08035 PF00459 Inositol monophosphatase family M1S49_08045 PF01649 Ribosomal protein S20 M1S49_08050 PF13460 NAD(P)H-binding M1S49_08055 PF03737 Aldolase/RraA M1S49_08075 PF02559 CarD-like/TRCF domain M1S49_08075 PF00270 DEAD/DEAH box helicase M1S49_08075 PF00271 Helicase conserved C-terminal domain M1S49_08075 PF03461 TRCF domain M1S49_08075 PF17757 UvrB interaction domain M1S49_08085 PF00211 Adenylate and Guanylate cyclase catalytic domain M1S49_08090 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S49_08095 PF00012 Hsp70 protein M1S49_08100 PF07743 HSCB C-terminal oligomerisation domain M1S49_08100 PF00226 DnaJ domain M1S49_08105 PF01521 Iron-sulphur cluster biosynthesis M1S49_08110 PF01592 NifU-like N terminal domain M1S49_08115 PF00266 Aminotransferase class-V M1S49_08120 PF02082 Transcriptional regulator M1S49_08135 PF00216 Bacterial DNA-binding protein M1S49_08140 PF00639 PPIC-type PPIASE domain M1S49_08140 PF09312 SurA N-terminal domain M1S49_08145 PF12833 Helix-turn-helix domain M1S49_08145 PF12852 Cupin M1S49_08150 PF00487 Fatty acid desaturase M1S49_08155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_08155 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_08155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_08160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_08160 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_08160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_08165 PF03109 ABC1 family M1S49_08175 PF04073 Aminoacyl-tRNA editing domain M1S49_08180 PF06276 Ferric iron reductase FhuF-like transporter M1S49_08180 PF04183 IucA / IucC family M1S49_08185 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S49_08190 PF07690 Major Facilitator Superfamily M1S49_08195 PF06276 Ferric iron reductase FhuF-like transporter M1S49_08195 PF04183 IucA / IucC family M1S49_08200 PF06276 Ferric iron reductase FhuF-like transporter M1S49_08200 PF04183 IucA / IucC family M1S49_08215 PF07715 TonB-dependent Receptor Plug Domain M1S49_08215 PF00593 TonB dependent receptor M1S49_08240 PF13419 Haloacid dehalogenase-like hydrolase M1S49_08250 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M1S49_08255 PF02277 Phosphoribosyltransferase M1S49_08270 PF02654 Cobalamin-5-phosphate synthase M1S49_08275 PF00793 DAHP synthetase I family M1S49_08280 PF01925 Sulfite exporter TauE/SafE M1S49_08300 PF00593 TonB dependent receptor M1S49_08300 PF07715 TonB-dependent Receptor Plug Domain M1S49_08305 PF02684 Lipid-A-disaccharide synthetase M1S49_08315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S49_08320 PF00005 ABC transporter M1S49_08355 PF01230 HIT domain M1S49_08385 PF08241 Methyltransferase domain M1S49_08390 PF00561 alpha/beta hydrolase fold M1S49_08395 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S49_08405 PF02575 YbaB/EbfC DNA-binding family M1S49_08410 PF02132 RecR protein M1S49_08410 PF13662 Toprim domain M1S49_08415 PF00570 HRDC domain M1S49_08415 PF01612 3'-5' exonuclease M1S49_08440 PF05166 YcgL domain M1S49_08450 PF00004 ATPase family associated with various cellular activities (AAA) M1S49_08450 PF17862 AAA+ lid domain M1S49_08450 PF01434 Peptidase family M41 M1S49_08460 PF00291 Pyridoxal-phosphate dependent enzyme M1S49_08465 PF05175 Methyltransferase small domain M1S49_08470 PF01264 Chorismate synthase M1S49_08475 PF08448 PAS fold M1S49_08475 PF00990 Diguanylate cyclase, GGDEF domain M1S49_08490 PF04055 Radical SAM superfamily M1S49_08495 PF00676 Dehydrogenase E1 component M1S49_08500 PF02779 Transketolase, pyrimidine binding domain M1S49_08500 PF02780 Transketolase, C-terminal domain M1S49_08505 PF02817 e3 binding domain M1S49_08505 PF00364 Biotin-requiring enzyme M1S49_08505 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S49_08510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S49_08510 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_08515 PF00106 short chain dehydrogenase M1S49_08520 PF00107 Zinc-binding dehydrogenase M1S49_08520 PF08240 Alcohol dehydrogenase GroES-like domain M1S49_08525 PF01062 Bestrophin, RFP-TM, chloride channel M1S49_08530 PF02954 Bacterial regulatory protein, Fis family M1S49_08530 PF00072 Response regulator receiver domain M1S49_08530 PF00158 Sigma-54 interaction domain M1S49_08535 PF04273 Putative phosphatase (DUF442) M1S49_08535 PF00753 Metallo-beta-lactamase superfamily M1S49_08550 PF01925 Sulfite exporter TauE/SafE M1S49_08565 PF06445 GyrI-like small molecule binding domain M1S49_08565 PF12833 Helix-turn-helix domain M1S49_08570 PF01638 HxlR-like helix-turn-helix M1S49_08575 PF02525 Flavodoxin-like fold M1S49_08585 PF00392 Bacterial regulatory proteins, gntR family M1S49_08585 PF07702 UTRA domain M1S49_08600 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S49_08605 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_08610 PF00005 ABC transporter M1S49_08625 PF00083 Sugar (and other) transporter M1S49_08630 PF07715 TonB-dependent Receptor Plug Domain M1S49_08630 PF00593 TonB dependent receptor M1S49_08650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_08650 PF03466 LysR substrate binding domain M1S49_08655 PF03466 LysR substrate binding domain M1S49_08655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_08660 PF00108 Thiolase, N-terminal domain M1S49_08660 PF02803 Thiolase, C-terminal domain M1S49_08665 PF02667 Short chain fatty acid transporter M1S49_08670 PF01144 Coenzyme A transferase M1S49_08675 PF01144 Coenzyme A transferase M1S49_08680 PF03466 LysR substrate binding domain M1S49_08680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_08705 PF06719 AraC-type transcriptional regulator N-terminus M1S49_08705 PF12833 Helix-turn-helix domain M1S49_08710 PF07690 Major Facilitator Superfamily M1S49_08715 PF01738 Dienelactone hydrolase family M1S49_08730 PF01613 Flavin reductase like domain M1S49_08740 PF14525 AraC-binding-like domain M1S49_08740 PF12833 Helix-turn-helix domain M1S49_08745 PF00970 Oxidoreductase FAD-binding domain M1S49_08745 PF00175 Oxidoreductase NAD-binding domain M1S49_08745 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S49_08750 PF00866 Ring hydroxylating beta subunit M1S49_08755 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S49_08755 PF00355 Rieske [2Fe-2S] domain M1S49_08760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_08760 PF03459 TOBE domain M1S49_08770 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_08775 PF00005 ABC transporter M1S49_08775 PF03459 TOBE domain M1S49_08780 PF00106 short chain dehydrogenase M1S49_08785 PF00550 Phosphopantetheine attachment site M1S49_08785 PF00857 Isochorismatase family M1S49_08795 PF00149 Calcineurin-like phosphoesterase M1S49_08800 PF13089 Polyphosphate kinase N-terminal domain M1S49_08800 PF17941 Polyphosphate kinase C-terminal domain 1 M1S49_08800 PF13090 Polyphosphate kinase C-terminal domain 2 M1S49_08800 PF02503 Polyphosphate kinase middle domain M1S49_08805 PF08042 PqqA family M1S49_08810 PF12706 Beta-lactamase superfamily domain M1S49_08815 PF03070 TENA/THI-4/PQQC family M1S49_08820 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M1S49_08825 PF04055 Radical SAM superfamily M1S49_08825 PF13186 Iron-sulfur cluster-binding domain M1S49_08830 PF01244 Membrane dipeptidase (Peptidase family M19) M1S49_08850 PF13091 PLD-like domain M1S49_08865 PF00199 Catalase M1S49_08875 PF08240 Alcohol dehydrogenase GroES-like domain M1S49_08875 PF00107 Zinc-binding dehydrogenase M1S49_08885 PF00419 Fimbrial protein M1S49_08890 PF13953 PapC C-terminal domain M1S49_08890 PF13954 PapC N-terminal domain M1S49_08890 PF00577 Outer membrane usher protein M1S49_08895 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S49_08895 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S49_08905 PF16970 Type-1 fimbrial protein, A M1S49_08925 PF01266 FAD dependent oxidoreductase M1S49_08940 PF01593 Flavin containing amine oxidoreductase M1S49_08945 PF00743 Flavin-binding monooxygenase-like M1S49_08950 PF12146 Serine aminopeptidase, S33 M1S49_08955 PF02321 Outer membrane efflux protein M1S49_08960 PF00873 AcrB/AcrD/AcrF family M1S49_08965 PF00529 HlyD membrane-fusion protein of T1SS M1S49_08965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S49_08970 PF00072 Response regulator receiver domain M1S49_08970 PF00486 Transcriptional regulatory protein, C terminal M1S49_08975 PF16527 Two-component sensor protein CpxA, periplasmic domain M1S49_08975 PF00672 HAMP domain M1S49_08975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_08975 PF00512 His Kinase A (phospho-acceptor) domain M1S49_08985 PF02311 AraC-like ligand binding domain M1S49_08985 PF12833 Helix-turn-helix domain M1S49_08990 PF12146 Serine aminopeptidase, S33 M1S49_09040 PF04607 Region found in RelA / SpoT proteins M1S49_09040 PF02824 TGS domain M1S49_09040 PF13291 ACT domain M1S49_09050 PF01975 Survival protein SurE M1S49_09075 PF07690 Major Facilitator Superfamily M1S49_09080 PF13533 Biotin-lipoyl like M1S49_09085 PF01425 Amidase M1S49_09090 PF00196 Bacterial regulatory proteins, luxR family M1S49_09165 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S49_09170 PF14572 Phosphoribosyl synthetase-associated domain M1S49_09170 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S49_09190 PF00005 ABC transporter M1S49_09195 PF01032 FecCD transport family M1S49_09205 PF08240 Alcohol dehydrogenase GroES-like domain M1S49_09205 PF00107 Zinc-binding dehydrogenase M1S49_09220 PF06719 AraC-type transcriptional regulator N-terminus M1S49_09220 PF12833 Helix-turn-helix domain M1S49_09225 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S49_09225 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S49_09230 PF07690 Major Facilitator Superfamily M1S49_09235 PF01370 NAD dependent epimerase/dehydratase family M1S49_09240 PF03466 LysR substrate binding domain M1S49_09240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_09250 PF00920 Dehydratase family M1S49_09255 PF00171 Aldehyde dehydrogenase family M1S49_09270 PF00529 HlyD membrane-fusion protein of T1SS M1S49_09270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S49_09290 PF10425 C-terminus of bacterial fibrinogen-binding adhesin M1S49_09290 PF17210 SdrD B-like domain M1S49_09290 PF04650 YSIRK type signal peptide M1S49_09290 PF17961 Bacterial Ig domain M1S49_09290 PF00746 LPXTG cell wall anchor motif M1S49_09310 PF03737 Aldolase/RraA M1S49_09315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S49_09315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S49_09315 PF01842 ACT domain M1S49_09320 PF07690 Major Facilitator Superfamily M1S49_09340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_09340 PF03466 LysR substrate binding domain M1S49_09350 PF08450 SMP-30/Gluconolactonase/LRE-like region M1S49_09355 PF00392 Bacterial regulatory proteins, gntR family M1S49_09355 PF07702 UTRA domain M1S49_09365 PF04909 Amidohydrolase M1S49_09370 PF07690 Major Facilitator Superfamily M1S49_09385 PF13332 Hemagglutinin repeat M1S49_09385 PF04829 Pre-toxin domain with VENN motif M1S49_09385 PF05860 haemagglutination activity domain M1S49_09385 PF13018 Extended Signal Peptide of Type V secretion system M1S49_09390 PF08479 POTRA domain, ShlB-type M1S49_09390 PF17287 POTRA domain M1S49_09390 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M1S49_09400 PF07687 Peptidase dimerisation domain M1S49_09400 PF01546 Peptidase family M20/M25/M40 M1S49_09410 PF00999 Sodium/hydrogen exchanger family M1S49_09410 PF02254 TrkA-N domain M1S49_09415 PF07995 Glucose / Sorbosone dehydrogenase M1S49_09420 PF03466 LysR substrate binding domain M1S49_09420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_09425 PF00857 Isochorismatase family M1S49_09435 PF00440 Bacterial regulatory proteins, tetR family M1S49_09435 PF08359 YsiA-like protein, C-terminal region M1S49_09440 PF12706 Beta-lactamase superfamily domain M1S49_09450 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_09460 PF00376 MerR family regulatory protein M1S49_09460 PF09278 MerR, DNA binding M1S49_09465 PF01872 RibD C-terminal domain M1S49_09470 PF00106 short chain dehydrogenase M1S49_09475 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_09475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S49_09480 PF01047 MarR family M1S49_09485 PF07859 alpha/beta hydrolase fold M1S49_09500 PF00199 Catalase M1S49_09500 PF06628 Catalase-related immune-responsive M1S49_09505 PF00561 alpha/beta hydrolase fold M1S49_09515 PF00171 Aldehyde dehydrogenase family M1S49_09520 PF08240 Alcohol dehydrogenase GroES-like domain M1S49_09520 PF00107 Zinc-binding dehydrogenase M1S49_09525 PF00474 Sodium:solute symporter family M1S49_09530 PF04341 Protein of unknown function, DUF485 M1S49_09535 PF00501 AMP-binding enzyme M1S49_09535 PF13193 AMP-binding enzyme C-terminal domain M1S49_09540 PF00158 Sigma-54 interaction domain M1S49_09540 PF02954 Bacterial regulatory protein, Fis family M1S49_09540 PF06506 Propionate catabolism activator M1S49_09570 PF00171 Aldehyde dehydrogenase family M1S49_09580 PF07690 Major Facilitator Superfamily M1S49_09585 PF00920 Dehydratase family M1S49_09590 PF00392 Bacterial regulatory proteins, gntR family M1S49_09590 PF07729 FCD domain M1S49_09600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_09600 PF03466 LysR substrate binding domain M1S49_09605 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S49_09605 PF13378 Enolase C-terminal domain-like M1S49_09610 PF02426 Muconolactone delta-isomerase M1S49_09615 PF00775 Dioxygenase M1S49_09615 PF04444 Catechol dioxygenase N terminus M1S49_09620 PF01144 Coenzyme A transferase M1S49_09625 PF01144 Coenzyme A transferase M1S49_09630 PF02803 Thiolase, C-terminal domain M1S49_09630 PF00108 Thiolase, N-terminal domain M1S49_09635 PF12146 Serine aminopeptidase, S33 M1S49_09640 PF01804 Penicillin amidase M1S49_09645 PF00171 Aldehyde dehydrogenase family M1S49_09655 PF01179 Copper amine oxidase, enzyme domain M1S49_09655 PF07833 Copper amine oxidase N-terminal domain M1S49_09655 PF02727 Copper amine oxidase, N2 domain M1S49_09655 PF02728 Copper amine oxidase, N3 domain M1S49_09660 PF02311 AraC-like ligand binding domain M1S49_09660 PF12833 Helix-turn-helix domain M1S49_09665 PF01613 Flavin reductase like domain M1S49_09670 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S49_09670 PF00175 Oxidoreductase NAD-binding domain M1S49_09685 PF00355 Rieske [2Fe-2S] domain M1S49_09685 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S49_09700 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S49_09705 PF01425 Amidase M1S49_09715 PF07690 Major Facilitator Superfamily M1S49_09725 PF00106 short chain dehydrogenase M1S49_09740 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_09740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_09740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_09745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_09745 PF03466 LysR substrate binding domain M1S49_09750 PF09339 IclR helix-turn-helix domain M1S49_09750 PF01614 Bacterial transcriptional regulator M1S49_09755 PF00753 Metallo-beta-lactamase superfamily M1S49_09765 PF04143 Sulphur transport M1S49_09775 PF13360 PQQ-like domain M1S49_09775 PF01011 PQQ enzyme repeat M1S49_09780 PF04966 Carbohydrate-selective porin, OprB family M1S49_09785 PF05048 Periplasmic copper-binding protein (NosD) M1S49_09790 PF01487 Type I 3-dehydroquinase M1S49_09795 PF00775 Dioxygenase M1S49_09800 PF00775 Dioxygenase M1S49_09800 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M1S49_09805 PF02627 Carboxymuconolactone decarboxylase family M1S49_09810 PF07690 Major Facilitator Superfamily M1S49_09815 PF00561 alpha/beta hydrolase fold M1S49_09820 PF00206 Lyase M1S49_09820 PF10397 Adenylosuccinate lyase C-terminus M1S49_09825 PF00108 Thiolase, N-terminal domain M1S49_09825 PF02803 Thiolase, C-terminal domain M1S49_09830 PF01144 Coenzyme A transferase M1S49_09835 PF01144 Coenzyme A transferase M1S49_09840 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M1S49_09845 PF04977 Septum formation initiator M1S49_09850 PF04239 Protein of unknown function (DUF421) M1S49_09855 PF00113 Enolase, C-terminal TIM barrel domain M1S49_09855 PF03952 Enolase, N-terminal domain M1S49_09860 PF00793 DAHP synthetase I family M1S49_09865 PF06418 CTP synthase N-terminus M1S49_09865 PF00117 Glutamine amidotransferase class-I M1S49_09895 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_09895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S49_09910 PF00793 DAHP synthetase I family M1S49_09915 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M1S49_09920 PF00004 ATPase family associated with various cellular activities (AAA) M1S49_09920 PF07724 AAA domain (Cdc48 subfamily) M1S49_09920 PF17871 AAA lid domain M1S49_09920 PF02861 Clp amino terminal domain, pathogenicity island component M1S49_09920 PF10431 C-terminal, D2-small domain, of ClpB protein M1S49_09925 PF02617 ATP-dependent Clp protease adaptor protein ClpS M1S49_09935 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S49_09935 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S49_09950 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M1S49_09955 PF00585 C-terminal regulatory domain of Threonine dehydratase M1S49_09955 PF00291 Pyridoxal-phosphate dependent enzyme M1S49_09960 PF02254 TrkA-N domain M1S49_09960 PF02080 TrkA-C domain M1S49_09965 PF02386 Cation transport protein M1S49_09970 PF02253 Phospholipase A1 M1S49_09975 PF05193 Peptidase M16 inactive domain M1S49_09975 PF00675 Insulinase (Peptidase family M16) M1S49_09975 PF08367 Peptidase M16C associated M1S49_09980 PF00593 TonB dependent receptor M1S49_09980 PF07715 TonB-dependent Receptor Plug Domain M1S49_09985 PF00294 pfkB family carbohydrate kinase M1S49_09995 PF07290 Protein of unknown function (DUF1449) M1S49_10010 PF01654 Cytochrome bd terminal oxidase subunit I M1S49_10015 PF02322 Cytochrome bd terminal oxidase subunit II M1S49_10020 PF08173 Membrane bound YbgT-like protein M1S49_10035 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M1S49_10045 PF02881 SRP54-type protein, helical bundle domain M1S49_10045 PF00448 SRP54-type protein, GTPase domain M1S49_10070 PF00571 CBS domain M1S49_10070 PF00478 IMP dehydrogenase / GMP reductase domain M1S49_10075 PF00202 Aminotransferase class-III M1S49_10080 PF00462 Glutaredoxin M1S49_10090 PF03466 LysR substrate binding domain M1S49_10090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_10095 PF00557 Metallopeptidase family M24 M1S49_10100 PF05525 Branched-chain amino acid transport protein M1S49_10125 PF05524 PEP-utilising enzyme, N-terminal M1S49_10125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M1S49_10125 PF00381 PTS HPr component phosphorylation site M1S49_10125 PF00391 PEP-utilising enzyme, mobile domain M1S49_10125 PF02896 PEP-utilising enzyme, TIM barrel domain M1S49_10130 PF00294 pfkB family carbohydrate kinase M1S49_10135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M1S49_10135 PF02378 Phosphotransferase system, EIIC M1S49_10155 PF00563 EAL domain M1S49_10155 PF00990 Diguanylate cyclase, GGDEF domain M1S49_10155 PF03707 Bacterial signalling protein N terminal repeat M1S49_10165 PF07995 Glucose / Sorbosone dehydrogenase M1S49_10170 PF02586 SOS response associated peptidase (SRAP) M1S49_10175 PF01740 STAS domain M1S49_10175 PF00916 Sulfate permease family M1S49_10180 PF00082 Subtilase family M1S49_10180 PF05922 Peptidase inhibitor I9 M1S49_10195 PF00324 Amino acid permease M1S49_10200 PF00266 Aminotransferase class-V M1S49_10205 PF01037 Lrp/AsnC ligand binding domain M1S49_10230 PF13419 Haloacid dehalogenase-like hydrolase M1S49_10235 PF01479 S4 domain M1S49_10240 PF00154 recA bacterial DNA recombination protein M1S49_10245 PF02631 RecX family M1S49_10260 PF00132 Bacterial transferase hexapeptide (six repeats) M1S49_10260 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M1S49_10265 PF07977 FabA-like domain M1S49_10270 PF00132 Bacterial transferase hexapeptide (six repeats) M1S49_10270 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M1S49_10280 PF01103 Surface antigen M1S49_10280 PF07244 Surface antigen variable number repeat M1S49_10285 PF02163 Peptidase family M50 M1S49_10285 PF17820 PDZ domain M1S49_10285 PF13180 PDZ domain M1S49_10290 PF13288 DXP reductoisomerase C-terminal domain M1S49_10290 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M1S49_10290 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M1S49_10300 PF01255 Putative undecaprenyl diphosphate synthase M1S49_10305 PF01765 Ribosome recycling factor M1S49_10310 PF00696 Amino acid kinase family M1S49_10315 PF04055 Radical SAM superfamily M1S49_10315 PF18693 TRAM domain M1S49_10315 PF00919 Uncharacterized protein family UPF0004 M1S49_10320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_10320 PF00512 His Kinase A (phospho-acceptor) domain M1S49_10320 PF00989 PAS fold M1S49_10325 PF00072 Response regulator receiver domain M1S49_10325 PF00158 Sigma-54 interaction domain M1S49_10325 PF02954 Bacterial regulatory protein, Fis family M1S49_10330 PF00440 Bacterial regulatory proteins, tetR family M1S49_10335 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S49_10335 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S49_10345 PF02542 YgbB family M1S49_10355 PF01266 FAD dependent oxidoreductase M1S49_10375 PF10415 Fumarase C C-terminus M1S49_10375 PF00206 Lyase M1S49_10380 PF16363 GDP-mannose 4,6 dehydratase M1S49_10385 PF02635 DsrE/DsrF-like family M1S49_10405 PF00892 EamA-like transporter family M1S49_10410 PF00155 Aminotransferase class I and II M1S49_10410 PF00392 Bacterial regulatory proteins, gntR family M1S49_10415 PF01638 HxlR-like helix-turn-helix M1S49_10420 PF00994 Probable molybdopterin binding domain M1S49_10420 PF03454 MoeA C-terminal region (domain IV) M1S49_10420 PF03453 MoeA N-terminal region (domain I and II) M1S49_10425 PF01967 MoaC family M1S49_10425 PF00994 Probable molybdopterin binding domain M1S49_10430 PF02391 MoaE protein M1S49_10440 PF06463 Molybdenum Cofactor Synthesis C M1S49_10440 PF04055 Radical SAM superfamily M1S49_10445 PF01568 Molydopterin dinucleotide binding domain M1S49_10445 PF00384 Molybdopterin oxidoreductase M1S49_10445 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S49_10450 PF12804 MobA-like NTP transferase domain M1S49_10455 PF01568 Molydopterin dinucleotide binding domain M1S49_10455 PF00384 Molybdopterin oxidoreductase M1S49_10455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S49_10455 PF04324 BFD-like [2Fe-2S] binding domain M1S49_10460 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_10460 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S49_10460 PF04324 BFD-like [2Fe-2S] binding domain M1S49_10460 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S49_10460 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S49_10465 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S49_10465 PF04324 BFD-like [2Fe-2S] binding domain M1S49_10465 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S49_10465 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S49_10465 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_10465 PF13806 Rieske-like [2Fe-2S] domain M1S49_10475 PF00486 Transcriptional regulatory protein, C terminal M1S49_10475 PF00072 Response regulator receiver domain M1S49_10480 PF00005 ABC transporter M1S49_10490 PF11799 impB/mucB/samB family C-terminal domain M1S49_10490 PF13438 Domain of unknown function (DUF4113) M1S49_10490 PF00817 impB/mucB/samB family M1S49_10495 PF01220 Dehydroquinase class II M1S49_10500 PF00364 Biotin-requiring enzyme M1S49_10505 PF02785 Biotin carboxylase C-terminal domain M1S49_10505 PF00289 Biotin carboxylase, N-terminal domain M1S49_10505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S49_10515 PF12832 MFS_1 like family M1S49_10525 PF10137 Predicted nucleotide-binding protein containing TIR-like domain M1S49_10570 PF01476 LysM domain M1S49_10570 PF08525 Opacity-associated protein A N-terminal motif M1S49_10570 PF01551 Peptidase family M23 M1S49_10605 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system M1S49_10725 PF13737 Transposase DDE domain M1S49_10785 PF01555 DNA methylase M1S49_10875 PF01645 Conserved region in glutamate synthase M1S49_10890 PF01565 FAD binding domain M1S49_10890 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M1S49_10895 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S49_10905 PF00465 Iron-containing alcohol dehydrogenase M1S49_10910 PF03061 Thioesterase superfamily M1S49_10915 PF05506 Domain of unknown function (DUF756) M1S49_10915 PF04185 Phosphoesterase family M1S49_10920 PF12170 DNA polymerase III tau subunit V interacting with alpha M1S49_10920 PF12169 DNA polymerase III subunits gamma and tau domain III M1S49_10920 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M1S49_10925 PF07690 Major Facilitator Superfamily M1S49_10935 PF00144 Beta-lactamase M1S49_10940 PF01575 MaoC like domain M1S49_10950 PF00108 Thiolase, N-terminal domain M1S49_10950 PF02803 Thiolase, C-terminal domain M1S49_10960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_10960 PF03466 LysR substrate binding domain M1S49_10965 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1S49_10970 PF01810 LysE type translocator M1S49_10975 PF01037 Lrp/AsnC ligand binding domain M1S49_10980 PF03594 Benzoate membrane transport protein M1S49_10985 PF02308 MgtC family M1S49_10990 PF00689 Cation transporting ATPase, C-terminus M1S49_10990 PF00690 Cation transporter/ATPase, N-terminus M1S49_11015 PF00582 Universal stress protein family M1S49_11020 PF12848 ABC transporter M1S49_11020 PF00005 ABC transporter M1S49_11040 PF07715 TonB-dependent Receptor Plug Domain M1S49_11040 PF00593 TonB dependent receptor M1S49_11075 PF00924 Mechanosensitive ion channel M1S49_11080 PF00593 TonB dependent receptor M1S49_11080 PF07715 TonB-dependent Receptor Plug Domain M1S49_11085 PF00440 Bacterial regulatory proteins, tetR family M1S49_11100 PF01037 Lrp/AsnC ligand binding domain M1S49_11105 PF01817 Chorismate mutase type II M1S49_11115 PF00106 short chain dehydrogenase M1S49_11125 PF11940 Domain of unknown function (DUF3458) Ig-like fold M1S49_11125 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M1S49_11125 PF01433 Peptidase family M1 domain M1S49_11140 PF02110 Hydroxyethylthiazole kinase family M1S49_11145 PF06445 GyrI-like small molecule binding domain M1S49_11155 PF05970 PIF1-like helicase M1S49_11155 PF14493 Helix-turn-helix domain M1S49_11160 PF00465 Iron-containing alcohol dehydrogenase M1S49_11175 PF00171 Aldehyde dehydrogenase family M1S49_11180 PF13520 Amino acid permease M1S49_11185 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M1S49_11190 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M1S49_11195 PF02540 NAD synthase M1S49_11195 PF00117 Glutamine amidotransferase class-I M1S49_11195 PF00958 GMP synthase C terminal domain M1S49_11200 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M1S49_11200 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S49_11205 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S49_11210 PF00149 Calcineurin-like phosphoesterase M1S49_11220 PF00881 Nitroreductase family M1S49_11230 PF17209 Hfq protein M1S49_11240 PF01119 DNA mismatch repair protein, C-terminal domain M1S49_11240 PF08676 MutL C terminal dimerisation domain M1S49_11245 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M1S49_11250 PF00849 RNA pseudouridylate synthase M1S49_11250 PF01479 S4 domain M1S49_11265 PF00849 RNA pseudouridylate synthase M1S49_11265 PF01479 S4 domain M1S49_11275 PF04284 Protein of unknown function (DUF441) M1S49_11280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_11280 PF03466 LysR substrate binding domain M1S49_11295 PF07690 Major Facilitator Superfamily M1S49_11300 PF00027 Cyclic nucleotide-binding domain M1S49_11300 PF00520 Ion transport protein M1S49_11310 PF00330 Aconitase family (aconitate hydratase) M1S49_11310 PF11791 Aconitate B N-terminal domain M1S49_11310 PF06434 Aconitate hydratase 2 N-terminus M1S49_11325 PF17243 POTRA domain TamA domain 1 M1S49_11325 PF07244 Surface antigen variable number repeat M1S49_11325 PF01103 Surface antigen M1S49_11330 PF07690 Major Facilitator Superfamily M1S49_11335 PF03232 Ubiquinone biosynthesis protein COQ7 M1S49_11345 PF00120 Glutamine synthetase, catalytic domain M1S49_11350 PF00486 Transcriptional regulatory protein, C terminal M1S49_11350 PF00072 Response regulator receiver domain M1S49_11355 PF02702 Osmosensitive K+ channel His kinase sensor domain M1S49_11355 PF00512 His Kinase A (phospho-acceptor) domain M1S49_11355 PF13493 Domain of unknown function (DUF4118) M1S49_11355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_11360 PF02669 K+-transporting ATPase, c chain M1S49_11370 PF03814 Potassium-transporting ATPase A subunit M1S49_11385 PF03109 ABC1 family M1S49_11390 PF00899 ThiF family M1S49_11395 PF01613 Flavin reductase like domain M1S49_11400 PF00501 AMP-binding enzyme M1S49_11400 PF13193 AMP-binding enzyme C-terminal domain M1S49_11405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_11405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_11405 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_11410 PF00106 short chain dehydrogenase M1S49_11415 PF12833 Helix-turn-helix domain M1S49_11420 PF09084 NMT1/THI5 like M1S49_11425 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_11430 PF13847 Methyltransferase domain M1S49_11430 PF17827 PrmC N-terminal domain M1S49_11435 PF03462 PCRF domain M1S49_11435 PF00472 RF-1 domain M1S49_11445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_11445 PF03466 LysR substrate binding domain M1S49_11460 PF00296 Luciferase-like monooxygenase M1S49_11470 PF13994 PgaD-like protein M1S49_11475 PF00535 Glycosyl transferase family 2 M1S49_11480 PF01522 Polysaccharide deacetylase M1S49_11480 PF14883 Hypothetical glycosyl hydrolase family 13 M1S49_11490 PF03618 Kinase/pyrophosphorylase M1S49_11495 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M1S49_11495 PF02896 PEP-utilising enzyme, TIM barrel domain M1S49_11495 PF00391 PEP-utilising enzyme, mobile domain M1S49_11505 PF06481 COX Aromatic Rich Motif M1S49_11505 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M1S49_11510 PF00115 Cytochrome C and Quinol oxidase polypeptide I M1S49_11515 PF00510 Cytochrome c oxidase subunit III M1S49_11520 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M1S49_11525 PF01040 UbiA prenyltransferase family M1S49_11530 PF01250 Ribosomal protein S6 M1S49_11535 PF01084 Ribosomal protein S18 M1S49_11540 PF03948 Ribosomal protein L9, C-terminal domain M1S49_11540 PF01281 Ribosomal protein L9, N-terminal domain M1S49_11545 PF00772 DnaB-like helicase N terminal domain M1S49_11545 PF03796 DnaB-like helicase C terminal domain M1S49_11550 PF00842 Alanine racemase, C-terminal domain M1S49_11550 PF01168 Alanine racemase, N-terminal domain M1S49_11560 PF01841 Transglutaminase-like superfamily M1S49_11560 PF08379 Bacterial transglutaminase-like N-terminal region M1S49_11570 PF14403 Circularly permuted ATP-grasp type 2 M1S49_11580 PF01134 Glucose inhibited division protein A M1S49_11580 PF13932 GidA associated domain M1S49_11600 PF02954 Bacterial regulatory protein, Fis family M1S49_11605 PF01808 AICARFT/IMPCHase bienzyme M1S49_11605 PF02142 MGS-like domain M1S49_11610 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M1S49_11610 PF02843 Phosphoribosylglycinamide synthetase, C domain M1S49_11610 PF02844 Phosphoribosylglycinamide synthetase, N domain M1S49_11615 PF03180 NLPA lipoprotein M1S49_11620 PF00005 ABC transporter M1S49_11620 PF09383 NIL domain M1S49_11625 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_11630 PF00753 Metallo-beta-lactamase superfamily M1S49_11630 PF16123 Hydroxyacylglutathione hydrolase C-terminus M1S49_11640 PF00375 Sodium:dicarboxylate symporter family M1S49_11655 PF13610 DDE domain M1S49_11665 PF00199 Catalase M1S49_11700 PF03061 Thioesterase superfamily M1S49_11705 PF00132 Bacterial transferase hexapeptide (six repeats) M1S49_11710 PF07848 PaaX-like protein M1S49_11710 PF08223 PaaX-like protein C-terminal domain M1S49_11715 PF00501 AMP-binding enzyme M1S49_11715 PF14535 AMP-binding enzyme C-terminal domain M1S49_11720 PF02803 Thiolase, C-terminal domain M1S49_11720 PF00108 Thiolase, N-terminal domain M1S49_11725 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S49_11725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S49_11725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S49_11730 PF00378 Enoyl-CoA hydratase/isomerase M1S49_11735 PF00378 Enoyl-CoA hydratase/isomerase M1S49_11740 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S49_11740 PF00970 Oxidoreductase FAD-binding domain M1S49_11740 PF00175 Oxidoreductase NAD-binding domain M1S49_11745 PF01883 Iron-sulfur cluster assembly protein M1S49_11750 PF05138 Phenylacetic acid catabolic protein M1S49_11755 PF06243 Phenylacetic acid degradation B M1S49_11760 PF05138 Phenylacetic acid catabolic protein M1S49_11765 PF00171 Aldehyde dehydrogenase family M1S49_11765 PF01575 MaoC like domain M1S49_11770 PF03313 Serine dehydratase alpha chain M1S49_11770 PF03315 Serine dehydratase beta chain M1S49_11775 PF13520 Amino acid permease M1S49_11780 PF00171 Aldehyde dehydrogenase family M1S49_11785 PF00083 Sugar (and other) transporter M1S49_11795 PF04324 BFD-like [2Fe-2S] binding domain M1S49_11795 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_11805 PF01266 FAD dependent oxidoreductase M1S49_11810 PF05544 Proline racemase M1S49_11815 PF00392 Bacterial regulatory proteins, gntR family M1S49_11825 PF00701 Dihydrodipicolinate synthetase family M1S49_11835 PF00376 MerR family regulatory protein M1S49_11835 PF09278 MerR, DNA binding M1S49_11850 PF02677 Epoxyqueuosine reductase QueH M1S49_11865 PF07690 Major Facilitator Superfamily M1S49_11870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S49_11880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_11880 PF03466 LysR substrate binding domain M1S49_11900 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M1S49_11905 PF06812 ImpA, N-terminal, type VI secretion system M1S49_11910 PF00004 ATPase family associated with various cellular activities (AAA) M1S49_11910 PF07724 AAA domain (Cdc48 subfamily) M1S49_11910 PF17871 AAA lid domain M1S49_11910 PF10431 C-terminal, D2-small domain, of ClpB protein M1S49_11925 PF00691 OmpA family M1S49_11925 PF01389 OmpA-like transmembrane domain M1S49_11935 PF06761 Intracellular multiplication and human macrophage-killing M1S49_11935 PF14331 ImcF-related N-terminal domain M1S49_11935 PF06744 Type VI secretion protein IcmF C-terminal M1S49_11950 PF05947 Type VI secretion system, TssF M1S49_11965 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M1S49_11990 PF00005 ABC transporter M1S49_11995 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S49_12000 PF01425 Amidase M1S49_12005 PF08753 NikR C terminal nickel binding domain M1S49_12005 PF01402 Ribbon-helix-helix protein, copG family M1S49_12025 PF02525 Flavodoxin-like fold M1S49_12030 PF02785 Biotin carboxylase C-terminal domain M1S49_12030 PF00289 Biotin carboxylase, N-terminal domain M1S49_12030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S49_12045 PF08240 Alcohol dehydrogenase GroES-like domain M1S49_12045 PF13823 Alcohol dehydrogenase GroES-associated M1S49_12045 PF00107 Zinc-binding dehydrogenase M1S49_12055 PF00440 Bacterial regulatory proteins, tetR family M1S49_12075 PF00654 Voltage gated chloride channel M1S49_12080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S49_12080 PF00364 Biotin-requiring enzyme M1S49_12080 PF00289 Biotin carboxylase, N-terminal domain M1S49_12080 PF02785 Biotin carboxylase C-terminal domain M1S49_12090 PF07286 Protein of unknown function (DUF1445) M1S49_12095 PF03746 LamB/YcsF family M1S49_12100 PF01566 Natural resistance-associated macrophage protein M1S49_12105 PF03466 LysR substrate binding domain M1S49_12105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_12120 PF05593 RHS Repeat M1S49_12120 PF03527 RHS protein M1S49_12125 PF13296 Putative type VI secretion system Rhs element Vgr M1S49_12125 PF04717 Type VI secretion system, phage-baseplate injector M1S49_12125 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S49_12135 PF13419 Haloacid dehalogenase-like hydrolase M1S49_12155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S49_12155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S49_12190 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S49_12195 PF00563 EAL domain M1S49_12195 PF03707 Bacterial signalling protein N terminal repeat M1S49_12195 PF00990 Diguanylate cyclase, GGDEF domain M1S49_12200 PF00892 EamA-like transporter family M1S49_12205 PF01037 Lrp/AsnC ligand binding domain M1S49_12210 PF05188 MutS domain II M1S49_12210 PF05192 MutS domain III M1S49_12210 PF01624 MutS domain I M1S49_12210 PF00488 MutS domain V M1S49_12210 PF05190 MutS family domain IV M1S49_12220 PF11953 Domain of unknown function (DUF3470) M1S49_12220 PF00037 4Fe-4S binding domain M1S49_12230 PF01596 O-methyltransferase M1S49_12240 PF00132 Bacterial transferase hexapeptide (six repeats) M1S49_12245 PF01205 Uncharacterized protein family UPF0029 M1S49_12255 PF00005 ABC transporter M1S49_12255 PF00664 ABC transporter transmembrane region M1S49_12255 PF03412 Peptidase C39 family M1S49_12260 PF02321 Outer membrane efflux protein M1S49_12265 PF12399 Branched-chain amino acid ATP-binding cassette transporter M1S49_12265 PF00005 ABC transporter M1S49_12270 PF03968 OstA-like protein M1S49_12285 PF00571 CBS domain M1S49_12285 PF01380 SIS domain M1S49_12290 PF09190 DALR domain M1S49_12290 PF01406 tRNA synthetases class I (C) catalytic domain M1S49_12315 PF01638 HxlR-like helix-turn-helix M1S49_12320 PF07690 Major Facilitator Superfamily M1S49_12345 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S49_12345 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S49_12355 PF00313 'Cold-shock' DNA-binding domain M1S49_12360 PF01810 LysE type translocator M1S49_12395 PF13742 OB-fold nucleic acid binding domain M1S49_12395 PF02601 Exonuclease VII, large subunit M1S49_12430 PF09278 MerR, DNA binding M1S49_12430 PF00376 MerR family regulatory protein M1S49_12435 PF00403 Heavy-metal-associated domain M1S49_12440 PF00403 Heavy-metal-associated domain M1S49_12445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_12445 PF03466 LysR substrate binding domain M1S49_12455 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S49_12455 PF00355 Rieske [2Fe-2S] domain M1S49_12460 PF00866 Ring hydroxylating beta subunit M1S49_12465 PF00970 Oxidoreductase FAD-binding domain M1S49_12465 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S49_12465 PF00175 Oxidoreductase NAD-binding domain M1S49_12470 PF00106 short chain dehydrogenase M1S49_12475 PF03594 Benzoate membrane transport protein M1S49_12480 PF07690 Major Facilitator Superfamily M1S49_12490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M1S49_12490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M1S49_12495 PF00270 DEAD/DEAH box helicase M1S49_12495 PF11898 Domain of unknown function (DUF3418) M1S49_12495 PF04408 Helicase associated domain (HA2) M1S49_12495 PF00271 Helicase conserved C-terminal domain M1S49_12495 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M1S49_12500 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S49_12500 PF00578 AhpC/TSA family M1S49_12520 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_12520 PF13192 Thioredoxin domain M1S49_12530 PF00043 Glutathione S-transferase, C-terminal domain M1S49_12530 PF02798 Glutathione S-transferase, N-terminal domain M1S49_12540 PF02390 Putative methyltransferase M1S49_12545 PF00043 Glutathione S-transferase, C-terminal domain M1S49_12545 PF13417 Glutathione S-transferase, N-terminal domain M1S49_12555 PF13488 Glycine zipper M1S49_12555 PF00691 OmpA family M1S49_12560 PF01979 Amidohydrolase family M1S49_12565 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S49_12565 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S49_12580 PF02926 THUMP domain M1S49_12580 PF01170 Putative RNA methylase family UPF0020 M1S49_12580 PF10672 S-adenosylmethionine-dependent methyltransferase M1S49_12595 PF00004 ATPase family associated with various cellular activities (AAA) M1S49_12595 PF17871 AAA lid domain M1S49_12595 PF02861 Clp amino terminal domain, pathogenicity island component M1S49_12595 PF10431 C-terminal, D2-small domain, of ClpB protein M1S49_12595 PF07724 AAA domain (Cdc48 subfamily) M1S49_12610 PF02566 OsmC-like protein M1S49_12620 PF00027 Cyclic nucleotide-binding domain M1S49_12620 PF13545 Crp-like helix-turn-helix domain M1S49_12630 PF00248 Aldo/keto reductase family M1S49_12645 PF00709 Adenylosuccinate synthetase M1S49_12650 PF13393 Histidyl-tRNA synthetase M1S49_12655 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S49_12655 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S49_12660 PF01411 tRNA synthetases class II (A) M1S49_12660 PF02272 DHHA1 domain M1S49_12660 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S49_12665 PF01842 ACT domain M1S49_12665 PF00696 Amino acid kinase family M1S49_12665 PF13840 ACT domain M1S49_12670 PF02599 Global regulator protein family M1S49_12675 PF01351 Ribonuclease HII M1S49_12685 PF01292 Prokaryotic cytochrome b561 M1S49_12690 PF00962 Adenosine/AMP deaminase M1S49_12695 PF00860 Permease family M1S49_12700 PF13610 DDE domain M1S49_12710 PF13610 DDE domain M1S49_12720 PF02796 Helix-turn-helix domain of resolvase M1S49_12720 PF00239 Resolvase, N terminal domain M1S49_12725 PF13610 DDE domain M1S49_12735 PF04958 Arginine N-succinyltransferase beta subunit M1S49_12740 PF00202 Aminotransferase class-III M1S49_12750 PF00171 Aldehyde dehydrogenase family M1S49_12760 PF07729 FCD domain M1S49_12760 PF00392 Bacterial regulatory proteins, gntR family M1S49_12770 PF00324 Amino acid permease M1S49_12775 PF01266 FAD dependent oxidoreductase M1S49_12780 PF00324 Amino acid permease M1S49_12820 PF03527 RHS protein M1S49_12820 PF05593 RHS Repeat M1S49_12825 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S49_12825 PF04717 Type VI secretion system, phage-baseplate injector M1S49_12825 PF13296 Putative type VI secretion system Rhs element Vgr M1S49_12845 PF03180 NLPA lipoprotein M1S49_12850 PF05987 Bacterial protein of unknown function (DUF898) M1S49_12865 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_12865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S49_12870 PF00764 Arginosuccinate synthase M1S49_12875 PF00360 Phytochrome region M1S49_12875 PF01590 GAF domain M1S49_12875 PF00563 EAL domain M1S49_12875 PF00990 Diguanylate cyclase, GGDEF domain M1S49_12880 PF01979 Amidohydrolase family M1S49_12885 PF00929 Exonuclease M1S49_12895 PF07715 TonB-dependent Receptor Plug Domain M1S49_12895 PF00593 TonB dependent receptor M1S49_12900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S49_12900 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_12905 PF00005 ABC transporter M1S49_12905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S49_12910 PF12911 N-terminal TM domain of oligopeptide transport permease C M1S49_12910 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_12915 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_12920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1S49_12925 PF01464 Transglycosylase SLT domain M1S49_12925 PF01476 LysM domain M1S49_12925 PF01476 LysM domain M1S49_12925 PF01464 Transglycosylase SLT domain M1S49_12930 PF00929 Exonuclease M1S49_12940 PF00293 NUDIX domain M1S49_12940 PF09297 NADH pyrophosphatase zinc ribbon domain M1S49_12950 PF04972 BON domain M1S49_12955 PF02021 Uncharacterised protein family UPF0102 M1S49_12960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S49_12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_12970 PF03466 LysR substrate binding domain M1S49_12975 PF01810 LysE type translocator M1S49_12985 PF13411 MerR HTH family regulatory protein M1S49_12995 PF01494 FAD binding domain M1S49_13000 PF01494 FAD binding domain M1S49_13005 PF00557 Metallopeptidase family M24 M1S49_13005 PF05195 Aminopeptidase P, N-terminal domain M1S49_13045 PF08019 Phosphoethanolamine transferase EptA/EptB M1S49_13045 PF00884 Sulfatase M1S49_13100 PF01551 Peptidase family M23 M1S49_13100 PF08525 Opacity-associated protein A N-terminal motif M1S49_13100 PF01476 LysM domain M1S49_13425 PF01812 5-formyltetrahydrofolate cyclo-ligase family M1S49_13430 PF04355 SmpA / OmlA family M1S49_13430 PF00691 OmpA family M1S49_13440 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S49_13440 PF02190 ATP-dependent protease La (LON) substrate-binding domain M1S49_13440 PF00004 ATPase family associated with various cellular activities (AAA) M1S49_13445 PF02590 Predicted SPOUT methyltransferase M1S49_13450 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M1S49_13460 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S49_13460 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S49_13465 PF04060 Putative Fe-S cluster M1S49_13470 PF10576 Iron-sulfur binding domain of endonuclease III M1S49_13470 PF00633 Helix-hairpin-helix motif M1S49_13470 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S49_13480 PF05191 Adenylate kinase, active site lid M1S49_13495 PF00905 Penicillin binding protein transpeptidase domain M1S49_13495 PF03717 Penicillin-binding Protein dimerisation domain M1S49_13510 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S49_13515 PF01730 UreF M1S49_13520 PF02814 UreE urease accessory protein, N-terminal domain M1S49_13520 PF05194 UreE urease accessory protein, C-terminal domain M1S49_13525 PF01979 Amidohydrolase family M1S49_13525 PF00449 Urease alpha-subunit, N-terminal domain M1S49_13530 PF00699 Urease beta subunit M1S49_13535 PF00547 Urease, gamma subunit M1S49_13540 PF01774 UreD urease accessory protein M1S49_13555 PF00463 Isocitrate lyase family M1S49_13560 PF03466 LysR substrate binding domain M1S49_13560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_13565 PF01595 Cyclin M transmembrane N-terminal domain M1S49_13565 PF03471 Transporter associated domain M1S49_13565 PF00571 CBS domain M1S49_13570 PF03600 Citrate transporter M1S49_13585 PF00009 Elongation factor Tu GTP binding domain M1S49_13590 PF01507 Phosphoadenosine phosphosulfate reductase family M1S49_13600 PF14052 Capsule assembly protein Wzi M1S49_13605 PF01336 OB-fold nucleic acid binding domain M1S49_13605 PF00152 tRNA synthetases class II (D, K and N) M1S49_13620 PF00301 Rubredoxin M1S49_13625 PF18113 Rubredoxin binding C-terminal domain M1S49_13625 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_13630 PF00561 alpha/beta hydrolase fold M1S49_13635 PF03466 LysR substrate binding domain M1S49_13635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_13645 PF02503 Polyphosphate kinase middle domain M1S49_13645 PF13089 Polyphosphate kinase N-terminal domain M1S49_13645 PF17941 Polyphosphate kinase C-terminal domain 1 M1S49_13645 PF13090 Polyphosphate kinase C-terminal domain 2 M1S49_13650 PF00912 Transglycosylase M1S49_13655 PF01694 Rhomboid family M1S49_13665 PF00005 ABC transporter M1S49_13670 PF13472 GDSL-like Lipase/Acylhydrolase family M1S49_13675 PF00484 Carbonic anhydrase M1S49_13680 PF00561 alpha/beta hydrolase fold M1S49_13690 PF00593 TonB dependent receptor M1S49_13690 PF07715 TonB-dependent Receptor Plug Domain M1S49_13695 PF01521 Iron-sulphur cluster biosynthesis M1S49_13695 PF01106 NifU-like domain M1S49_13705 PF00884 Sulfatase M1S49_13710 PF03781 Sulfatase-modifying factor enzyme 1 M1S49_13725 PF00291 Pyridoxal-phosphate dependent enzyme M1S49_13730 PF01384 Phosphate transporter family M1S49_13735 PF02574 Homocysteine S-methyltransferase M1S49_13735 PF00809 Pterin binding enzyme M1S49_13735 PF02310 B12 binding domain M1S49_13735 PF02607 B12 binding domain M1S49_13735 PF02965 Vitamin B12 dependent methionine synthase, activation domain M1S49_13740 PF02779 Transketolase, pyrimidine binding domain M1S49_13740 PF02780 Transketolase, C-terminal domain M1S49_13745 PF00456 Transketolase, thiamine diphosphate binding domain M1S49_13750 PF07690 Major Facilitator Superfamily M1S49_13760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_13760 PF03466 LysR substrate binding domain M1S49_13770 PF01263 Aldose 1-epimerase M1S49_13775 PF07690 Major Facilitator Superfamily M1S49_13780 PF02311 AraC-like ligand binding domain M1S49_13780 PF12833 Helix-turn-helix domain M1S49_13785 PF04960 Glutaminase M1S49_13790 PF01327 Polypeptide deformylase M1S49_13795 PF07690 Major Facilitator Superfamily M1S49_13805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S49_13805 PF00205 Thiamine pyrophosphate enzyme, central domain M1S49_13805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S49_13810 PF00171 Aldehyde dehydrogenase family M1S49_13815 PF03447 Homoserine dehydrogenase, NAD binding domain M1S49_13815 PF01958 Domain of unknown function DUF108 M1S49_13825 PF12697 Alpha/beta hydrolase family M1S49_13835 PF07690 Major Facilitator Superfamily M1S49_13840 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_13840 PF14759 Reductase C-terminal M1S49_13845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S49_13855 PF00355 Rieske [2Fe-2S] domain M1S49_13865 PF00355 Rieske [2Fe-2S] domain M1S49_13870 PF09339 IclR helix-turn-helix domain M1S49_13870 PF01614 Bacterial transcriptional regulator M1S49_13885 PF00378 Enoyl-CoA hydratase/isomerase M1S49_13895 PF00535 Glycosyl transferase family 2 M1S49_13900 PF14883 Hypothetical glycosyl hydrolase family 13 M1S49_13900 PF01522 Polysaccharide deacetylase M1S49_13905 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S49_13910 PF07152 YaeQ protein M1S49_13915 PF00375 Sodium:dicarboxylate symporter family M1S49_13920 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S49_13920 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S49_13930 PF03061 Thioesterase superfamily M1S49_13940 PF02028 BCCT, betaine/carnitine/choline family transporter M1S49_13945 PF02028 BCCT, betaine/carnitine/choline family transporter M1S49_13950 PF00440 Bacterial regulatory proteins, tetR family M1S49_13950 PF13977 BetI-type transcriptional repressor, C-terminal M1S49_13955 PF00171 Aldehyde dehydrogenase family M1S49_13960 PF05199 GMC oxidoreductase M1S49_13960 PF00732 GMC oxidoreductase M1S49_13965 PF06039 Malate:quinone oxidoreductase (Mqo) M1S49_13975 PF02574 Homocysteine S-methyltransferase M1S49_13980 PF13520 Amino acid permease M1S49_14005 PF01126 Heme oxygenase M1S49_14015 PF04575 Protein of unknown function (DUF560) M1S49_14025 PF07715 TonB-dependent Receptor Plug Domain M1S49_14025 PF00593 TonB dependent receptor M1S49_14035 PF04542 Sigma-70 region 2 M1S49_14035 PF08281 Sigma-70, region 4 M1S49_14045 PF00701 Dihydrodipicolinate synthetase family M1S49_14050 PF00083 Sugar (and other) transporter M1S49_14070 PF01026 TatD related DNase M1S49_14085 PF07693 KAP family P-loop domain M1S49_14110 PF00436 Single-strand binding protein family M1S49_14155 PF13356 Arm DNA-binding domain M1S49_14155 PF00589 Phage integrase family M1S49_14170 PF07690 Major Facilitator Superfamily M1S49_14175 PF13533 Biotin-lipoyl like M1S49_14180 PF03061 Thioesterase superfamily M1S49_14185 PF00490 Delta-aminolevulinic acid dehydratase M1S49_14190 PF01266 FAD dependent oxidoreductase M1S49_14195 PF08338 Domain of unknown function (DUF1731) M1S49_14195 PF01370 NAD dependent epimerase/dehydratase family M1S49_14215 PF00149 Calcineurin-like phosphoesterase M1S49_14215 PF12320 Type 5 capsule protein repressor C-terminal domain M1S49_14225 PF01168 Alanine racemase, N-terminal domain M1S49_14230 PF00437 Type II/IV secretion system protein M1S49_14235 PF00437 Type II/IV secretion system protein M1S49_14240 PF01475 Ferric uptake regulator family M1S49_14245 PF04355 SmpA / OmlA family M1S49_14250 PF03658 RnfH family Ubiquitin M1S49_14260 PF01814 Hemerythrin HHE cation binding domain M1S49_14265 PF13230 Glutamine amidotransferases class-II M1S49_14275 PF00696 Amino acid kinase family M1S49_14280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S49_14280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S49_14280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S49_14280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S49_14285 PF00692 dUTPase M1S49_14290 PF13361 UvrD-like helicase C-terminal domain M1S49_14290 PF00580 UvrD/REP helicase N-terminal domain M1S49_14295 PF00691 OmpA family M1S49_14295 PF13488 Glycine zipper M1S49_14300 PF01553 Acyltransferase M1S49_14310 PF03775 Septum formation inhibitor MinC, C-terminal domain M1S49_14315 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M1S49_14320 PF03776 Septum formation topological specificity factor MinE M1S49_14335 PF01810 LysE type translocator M1S49_14340 PF17854 FtsK alpha domain M1S49_14340 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M1S49_14340 PF09397 Ftsk gamma domain M1S49_14340 PF01580 FtsK/SpoIIIE family M1S49_14345 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S49_14350 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M1S49_14355 PF04377 Arginine-tRNA-protein transferase, C terminus M1S49_14355 PF04376 Arginine-tRNA-protein transferase, N terminus M1S49_14360 PF00583 Acetyltransferase (GNAT) family M1S49_14375 PF00009 Elongation factor Tu GTP binding domain M1S49_14375 PF03144 Elongation factor Tu domain 2 M1S49_14375 PF03143 Elongation factor Tu C-terminal domain M1S49_14380 PF03144 Elongation factor Tu domain 2 M1S49_14380 PF00679 Elongation factor G C-terminus M1S49_14380 PF14492 Elongation Factor G, domain II M1S49_14380 PF03764 Elongation factor G, domain IV M1S49_14380 PF00009 Elongation factor Tu GTP binding domain M1S49_14385 PF00177 Ribosomal protein S7p/S5e M1S49_14390 PF00164 Ribosomal protein S12/S23 M1S49_14400 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S49_14400 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S49_14405 PF03653 Uncharacterised protein family (UPF0093) M1S49_14410 PF02678 Pirin M1S49_14410 PF05726 Pirin C-terminal cupin domain M1S49_14420 PF02540 NAD synthase M1S49_14420 PF00795 Carbon-nitrogen hydrolase M1S49_14435 PF00970 Oxidoreductase FAD-binding domain M1S49_14435 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S49_14435 PF00175 Oxidoreductase NAD-binding domain M1S49_14440 PF00171 Aldehyde dehydrogenase family M1S49_14445 PF00355 Rieske [2Fe-2S] domain M1S49_14445 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S49_14450 PF07859 alpha/beta hydrolase fold M1S49_14455 PF02028 BCCT, betaine/carnitine/choline family transporter M1S49_14460 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S49_14465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_14465 PF03466 LysR substrate binding domain M1S49_14485 PF00037 4Fe-4S binding domain M1S49_14490 PF01467 Cytidylyltransferase-like M1S49_14495 PF01668 SmpB protein M1S49_14500 PF03358 NADPH-dependent FMN reductase M1S49_14505 PF02578 Multi-copper polyphenol oxidoreductase laccase M1S49_14510 PF00849 RNA pseudouridylate synthase M1S49_14510 PF01479 S4 domain M1S49_14515 PF13525 Outer membrane lipoprotein M1S49_14520 PF08278 DNA primase DnaG DnaB-binding M1S49_14520 PF08275 DNA primase catalytic core, N-terminal domain M1S49_14520 PF01807 CHC2 zinc finger M1S49_14520 PF10410 DnaB-helicase binding domain of primase M1S49_14525 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M1S49_14525 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M1S49_14525 PF01488 Shikimate / quinate 5-dehydrogenase M1S49_14535 PF03550 Outer membrane lipoprotein LolB M1S49_14540 PF08544 GHMP kinases C terminal M1S49_14540 PF00288 GHMP kinases N terminal domain M1S49_14565 PF14572 Phosphoribosyl synthetase-associated domain M1S49_14565 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S49_14570 PF01386 Ribosomal L25p family M1S49_14575 PF01195 Peptidyl-tRNA hydrolase M1S49_14580 PF02261 Aspartate decarboxylase M1S49_14595 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S49_14605 PF02581 Thiamine monophosphate synthase M1S49_14605 PF03070 TENA/THI-4/PQQC family M1S49_14605 PF08543 Phosphomethylpyrimidine kinase M1S49_14610 PF04972 BON domain M1S49_14610 PF01476 LysM domain M1S49_14615 PF00550 Phosphopantetheine attachment site M1S49_14625 PF00698 Acyl transferase domain M1S49_14630 PF01783 Ribosomal L32p protein family M1S49_14635 PF02620 Large ribosomal RNA subunit accumulation protein YceD M1S49_14640 PF04315 Elongation factor P hydroxylase M1S49_14645 PF01300 Telomere recombination M1S49_14650 PF02616 Segregation and condensation protein ScpA M1S49_14655 PF04079 Segregation and condensation complex subunit ScpB M1S49_14660 PF00849 RNA pseudouridylate synthase M1S49_14660 PF01479 S4 domain M1S49_14675 PF00155 Aminotransferase class I and II M1S49_14680 PF06968 Biotin and Thiamin Synthesis associated domain M1S49_14680 PF04055 Radical SAM superfamily M1S49_14680 PF00202 Aminotransferase class-III M1S49_14685 PF12697 Alpha/beta hydrolase family M1S49_14685 PF08241 Methyltransferase domain M1S49_14690 PF02358 Trehalose-phosphatase M1S49_14695 PF00982 Glycosyltransferase family 20 M1S49_14700 PF07690 Major Facilitator Superfamily M1S49_14705 PF00210 Ferritin-like domain M1S49_14710 PF01653 NAD-dependent DNA ligase adenylation domain M1S49_14710 PF03120 NAD-dependent DNA ligase OB-fold domain M1S49_14710 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M1S49_14710 PF12826 Helix-hairpin-helix motif M1S49_14710 PF00533 BRCA1 C Terminus (BRCT) domain M1S49_14720 PF06470 SMC proteins Flexible Hinge Domain M1S49_14720 PF02463 RecF/RecN/SMC N terminal domain M1S49_14730 PF01925 Sulfite exporter TauE/SafE M1S49_14740 PF03309 Type III pantothenate kinase M1S49_14745 PF02881 SRP54-type protein, helical bundle domain M1S49_14745 PF00448 SRP54-type protein, GTPase domain M1S49_14745 PF02978 Signal peptide binding domain M1S49_14755 PF01207 Dihydrouridine synthase (Dus) M1S49_14785 PF00692 dUTPase M1S49_14800 PF01048 Phosphorylase superfamily M1S49_14805 PF10609 NUBPL iron-transfer P-loop NTPase M1S49_14815 PF01588 Putative tRNA binding domain M1S49_14815 PF09334 tRNA synthetases class I (M) M1S49_14840 PF13533 Biotin-lipoyl like M1S49_14845 PF00291 Pyridoxal-phosphate dependent enzyme M1S49_14860 PF05552 Conserved TM helix M1S49_14875 PF00970 Oxidoreductase FAD-binding domain M1S49_14875 PF00175 Oxidoreductase NAD-binding domain M1S49_14880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_14880 PF03466 LysR substrate binding domain M1S49_14885 PF00313 'Cold-shock' DNA-binding domain M1S49_14895 PF00361 Proton-conducting membrane transporter M1S49_14900 PF00361 Proton-conducting membrane transporter M1S49_14905 PF00361 Proton-conducting membrane transporter M1S49_14905 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S49_14910 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S49_14915 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M1S49_14920 PF12838 4Fe-4S dicluster domain M1S49_14925 PF00146 NADH dehydrogenase M1S49_14930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S49_14930 PF00384 Molybdopterin oxidoreductase M1S49_14930 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M1S49_14935 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M1S49_14935 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M1S49_14935 PF10531 SLBB domain M1S49_14945 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M1S49_14945 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M1S49_14950 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M1S49_14955 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M1S49_14960 PF17151 Periplasmic sensor domain M1S49_14960 PF00990 Diguanylate cyclase, GGDEF domain M1S49_14970 PF00672 HAMP domain M1S49_14970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_14970 PF00512 His Kinase A (phospho-acceptor) domain M1S49_14975 PF00486 Transcriptional regulatory protein, C terminal M1S49_14975 PF00072 Response regulator receiver domain M1S49_14985 PF03477 ATP cone domain M1S49_14985 PF02867 Ribonucleotide reductase, barrel domain M1S49_14985 PF00317 Ribonucleotide reductase, all-alpha domain M1S49_14995 PF00268 Ribonucleotide reductase, small chain M1S49_15005 PF13755 Sensor N-terminal transmembrane domain M1S49_15005 PF00672 HAMP domain M1S49_15005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_15005 PF00512 His Kinase A (phospho-acceptor) domain M1S49_15005 PF13756 Stimulus-sensing domain M1S49_15075 PF13360 PQQ-like domain M1S49_15075 PF01011 PQQ enzyme repeat M1S49_15100 PF02567 Phenazine biosynthesis-like protein M1S49_15125 PF01613 Flavin reductase like domain M1S49_15130 PF01717 Cobalamin-independent synthase, Catalytic domain M1S49_15130 PF08267 Cobalamin-independent synthase, N-terminal domain M1S49_15140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_15140 PF03466 LysR substrate binding domain M1S49_15145 PF01810 LysE type translocator M1S49_15155 PF12833 Helix-turn-helix domain M1S49_15155 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S49_15160 PF01546 Peptidase family M20/M25/M40 M1S49_15160 PF07687 Peptidase dimerisation domain M1S49_15170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_15170 PF03466 LysR substrate binding domain M1S49_15175 PF07690 Major Facilitator Superfamily M1S49_15185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_15185 PF03466 LysR substrate binding domain M1S49_15190 PF14537 Cytochrome c3 M1S49_15190 PF00890 FAD binding domain M1S49_15200 PF02515 CoA-transferase family III M1S49_15205 PF07690 Major Facilitator Superfamily M1S49_15210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_15210 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_15210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_15215 PF03466 LysR substrate binding domain M1S49_15215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_15220 PF08240 Alcohol dehydrogenase GroES-like domain M1S49_15220 PF00107 Zinc-binding dehydrogenase M1S49_15225 PF00962 Adenosine/AMP deaminase M1S49_15250 PF02445 Quinolinate synthetase A protein M1S49_15255 PF01960 ArgJ family M1S49_15260 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S49_15260 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S49_15265 PF00893 Small Multidrug Resistance protein M1S49_15275 PF05275 Copper resistance protein B precursor (CopB) M1S49_15280 PF07731 Multicopper oxidase M1S49_15280 PF00394 Multicopper oxidase M1S49_15280 PF07732 Multicopper oxidase M1S49_15295 PF00834 Ribulose-phosphate 3 epimerase family M1S49_15305 PF00756 Putative esterase M1S49_15315 PF04445 Putative SAM-dependent methyltransferase M1S49_15320 PF00814 Glycoprotease family M1S49_15325 PF00132 Bacterial transferase hexapeptide (six repeats) M1S49_15330 PF00293 NUDIX domain M1S49_15370 PF04715 Anthranilate synthase component I, N terminal region M1S49_15370 PF00425 chorismate binding enzyme M1S49_15375 PF00155 Aminotransferase class I and II M1S49_15380 PF00815 Histidinol dehydrogenase M1S49_15385 PF01634 ATP phosphoribosyltransferase M1S49_15390 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S49_15395 PF01722 BolA-like protein M1S49_15400 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M1S49_15405 PF00309 Sigma-54 factor, Activator interacting domain (AID) M1S49_15405 PF04552 Sigma-54, DNA binding domain M1S49_15405 PF04963 Sigma-54 factor, core binding domain M1S49_15450 PF00795 Carbon-nitrogen hydrolase M1S49_15460 PF01047 MarR family M1S49_15465 PF02566 OsmC-like protein M1S49_15470 PF00437 Type II/IV secretion system protein M1S49_15490 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S49_15490 PF01612 3'-5' exonuclease M1S49_15490 PF00476 DNA polymerase family A M1S49_15490 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S49_15495 PF02325 YGGT family M1S49_15500 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S49_15500 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S49_15505 PF11734 TilS substrate C-terminal domain M1S49_15505 PF01171 PP-loop family M1S49_15505 PF09179 TilS substrate binding domain M1S49_15510 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M1S49_15515 PF02541 Ppx/GppA phosphatase family M1S49_15520 PF00085 Thioredoxin M1S49_15525 PF07498 Rho termination factor, N-terminal domain M1S49_15525 PF07497 Rho termination factor, RNA-binding domain M1S49_15525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S49_15540 PF00216 Bacterial DNA-binding protein M1S49_15545 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M1S49_15545 PF03147 Ferredoxin-fold anticodon binding domain M1S49_15545 PF03483 B3/4 domain M1S49_15545 PF03484 tRNA synthetase B5 domain M1S49_15545 PF01588 Putative tRNA binding domain M1S49_15550 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M1S49_15550 PF01409 tRNA synthetases class II core domain (F) M1S49_15570 PF00453 Ribosomal protein L20 M1S49_15575 PF01632 Ribosomal protein L35 M1S49_15585 PF07690 Major Facilitator Superfamily M1S49_15590 PF09335 SNARE associated Golgi protein M1S49_15595 PF00043 Glutathione S-transferase, C-terminal domain M1S49_15595 PF02798 Glutathione S-transferase, N-terminal domain M1S49_15600 PF00707 Translation initiation factor IF-3, C-terminal domain M1S49_15600 PF05198 Translation initiation factor IF-3, N-terminal domain M1S49_15605 PF03129 Anticodon binding domain M1S49_15605 PF02824 TGS domain M1S49_15605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S49_15605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S49_15610 PF00501 AMP-binding enzyme M1S49_15610 PF13193 AMP-binding enzyme C-terminal domain M1S49_15615 PF04751 Protein of unknown function (DUF615) M1S49_15620 PF00381 PTS HPr component phosphorylation site M1S49_15625 PF03668 P-loop ATPase protein family M1S49_15630 PF02569 Pantoate-beta-alanine ligase M1S49_15635 PF02548 Ketopantoate hydroxymethyltransferase M1S49_15640 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M1S49_15645 PF12626 Polymerase A arginine-rich C-terminus M1S49_15645 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S49_15645 PF01743 Poly A polymerase head domain M1S49_15655 PF03819 MazG nucleotide pyrophosphohydrolase domain M1S49_15665 PF13291 ACT domain M1S49_15665 PF04607 Region found in RelA / SpoT proteins M1S49_15665 PF02824 TGS domain M1S49_15670 PF05958 tRNA (Uracil-5-)-methyltransferase M1S49_15680 PF00291 Pyridoxal-phosphate dependent enzyme M1S49_15685 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M1S49_15685 PF01627 Hpt domain M1S49_15685 PF00072 Response regulator receiver domain M1S49_15685 PF00672 HAMP domain M1S49_15685 PF00512 His Kinase A (phospho-acceptor) domain M1S49_15685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_15690 PF00378 Enoyl-CoA hydratase/isomerase M1S49_15695 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S49_15695 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S49_15700 PF01261 Xylose isomerase-like TIM barrel M1S49_15710 PF00106 short chain dehydrogenase M1S49_15715 PF02233 NAD(P) transhydrogenase beta subunit M1S49_15720 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M1S49_15725 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M1S49_15725 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M1S49_15730 PF00892 EamA-like transporter family M1S49_15740 PF07690 Major Facilitator Superfamily M1S49_15745 PF01207 Dihydrouridine synthase (Dus) M1S49_15755 PF03466 LysR substrate binding domain M1S49_15755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_15765 PF00899 ThiF family M1S49_15775 PF00330 Aconitase family (aconitate hydratase) M1S49_15775 PF00694 Aconitase C-terminal domain M1S49_15780 PF01026 TatD related DNase M1S49_15795 PF00009 Elongation factor Tu GTP binding domain M1S49_15795 PF03144 Elongation factor Tu domain 2 M1S49_15795 PF16658 Class II release factor RF3, C-terminal domain M1S49_15815 PF00563 EAL domain M1S49_15815 PF03707 Bacterial signalling protein N terminal repeat M1S49_15815 PF00990 Diguanylate cyclase, GGDEF domain M1S49_15820 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M1S49_15820 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M1S49_15825 PF10369 Small subunit of acetolactate synthase M1S49_15830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S49_15830 PF00205 Thiamine pyrophosphate enzyme, central domain M1S49_15830 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S49_15840 PF09334 tRNA synthetases class I (M) M1S49_15840 PF08264 Anticodon-binding domain of tRNA M1S49_15840 PF00133 tRNA synthetases class I (I, L, M and V) M1S49_15840 PF13603 Leucyl-tRNA synthetase, Domain 2 M1S49_15855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S49_15860 PF00005 ABC transporter M1S49_15860 PF02687 FtsX-like permease family M1S49_15860 PF12704 MacB-like periplasmic core domain M1S49_15865 PF02321 Outer membrane efflux protein M1S49_15880 PF00929 Exonuclease M1S49_15885 PF03193 RsgA GTPase M1S49_15895 PF00462 Glutaredoxin M1S49_15900 PF02556 Preprotein translocase subunit SecB M1S49_15915 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S49_15915 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S49_15930 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S49_15930 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S49_15940 PF04820 Tryptophan halogenase M1S49_15960 PF00221 Aromatic amino acid lyase M1S49_15975 PF13193 AMP-binding enzyme C-terminal domain M1S49_15975 PF00501 AMP-binding enzyme M1S49_15985 PF00550 Phosphopantetheine attachment site M1S49_15990 PF00550 Phosphopantetheine attachment site M1S49_16005 PF01926 50S ribosome-binding GTPase M1S49_16005 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M1S49_16010 PF13360 PQQ-like domain M1S49_16020 PF13393 Histidyl-tRNA synthetase M1S49_16020 PF03129 Anticodon binding domain M1S49_16025 PF04551 GcpE protein M1S49_16030 PF13464 Domain of unknown function (DUF4115) M1S49_16040 PF04055 Radical SAM superfamily M1S49_16045 PF00334 Nucleoside diphosphate kinase M1S49_16050 PF04384 Iron-sulphur cluster assembly M1S49_16055 PF01569 PAP2 superfamily M1S49_16060 PF13439 Glycosyltransferase Family 4 M1S49_16060 PF00534 Glycosyl transferases group 1 M1S49_16065 PF11818 C-terminal domain of tail specific protease (DUF3340) M1S49_16065 PF17804 Tail specific protease N-terminal domain M1S49_16065 PF03572 Peptidase family S41 M1S49_16065 PF00595 PDZ domain M1S49_16070 PF00933 Glycosyl hydrolase family 3 N terminal domain M1S49_16080 PF00561 alpha/beta hydrolase fold M1S49_16085 PF00171 Aldehyde dehydrogenase family M1S49_16090 PF00171 Aldehyde dehydrogenase family M1S49_16095 PF01202 Shikimate kinase M1S49_16100 PF02447 GntP family permease M1S49_16105 PF01081 KDPG and KHG aldolase M1S49_16110 PF00920 Dehydratase family M1S49_16115 PF00871 Acetokinase family M1S49_16120 PF01515 Phosphate acetyl/butaryl transferase M1S49_16120 PF07085 DRTGG domain M1S49_16125 PF05681 Fumarate hydratase (Fumerase) M1S49_16125 PF05683 Fumarase C-terminus M1S49_16140 PF07724 AAA domain (Cdc48 subfamily) M1S49_16140 PF10431 C-terminal, D2-small domain, of ClpB protein M1S49_16140 PF06689 ClpX C4-type zinc finger M1S49_16145 PF00574 Clp protease M1S49_16150 PF05697 Bacterial trigger factor protein (TF) M1S49_16150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S49_16150 PF05698 Bacterial trigger factor protein (TF) C-terminus M1S49_16155 PF07715 TonB-dependent Receptor Plug Domain M1S49_16155 PF00593 TonB dependent receptor M1S49_16160 PF18331 PKHD-type hydroxylase C-terminal domain M1S49_16160 PF13640 2OG-Fe(II) oxygenase superfamily M1S49_16165 PF08502 LeuA allosteric (dimerisation) domain M1S49_16165 PF00682 HMGL-like M1S49_16170 PF00561 alpha/beta hydrolase fold M1S49_16175 PF07021 Methionine biosynthesis protein MetW M1S49_16175 PF00561 alpha/beta hydrolase fold M1S49_16185 PF01725 Ham1 family M1S49_16195 PF02416 mttA/Hcf106 family M1S49_16200 PF02416 mttA/Hcf106 family M1S49_16205 PF00902 Sec-independent protein translocase protein (TatC) M1S49_16225 PF01790 Prolipoprotein diacylglyceryl transferase M1S49_16240 PF00303 Thymidylate synthase M1S49_16245 PF00186 Dihydrofolate reductase M1S49_16255 PF01625 Peptide methionine sulfoxide reductase M1S49_16265 PF01618 MotA/TolQ/ExbB proton channel family M1S49_16275 PF00551 Formyl transferase M1S49_16275 PF01842 ACT domain M1S49_16285 PF00171 Aldehyde dehydrogenase family M1S49_16290 PF00830 Ribosomal L28 family M1S49_16295 PF00471 Ribosomal protein L33 M1S49_16300 PF02254 TrkA-N domain M1S49_16300 PF00999 Sodium/hydrogen exchanger family M1S49_16320 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) M1S49_16325 PF00580 UvrD/REP helicase N-terminal domain M1S49_16325 PF13361 UvrD-like helicase C-terminal domain M1S49_16340 PF01751 Toprim domain M1S49_16340 PF01131 DNA topoisomerase M1S49_16340 PF01396 Topoisomerase DNA binding C4 zinc finger M1S49_16340 PF08272 Topoisomerase I zinc-ribbon-like M1S49_16350 PF01638 HxlR-like helix-turn-helix M1S49_16355 PF08240 Alcohol dehydrogenase GroES-like domain M1S49_16355 PF00107 Zinc-binding dehydrogenase M1S49_16360 PF04102 SlyX M1S49_16365 PF00005 ABC transporter M1S49_16365 PF16326 ABC transporter C-terminal domain M1S49_16365 PF12848 ABC transporter M1S49_16370 PF01810 LysE type translocator M1S49_16375 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S49_16385 PF00375 Sodium:dicarboxylate symporter family M1S49_16395 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S49_16395 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S49_16415 PF01416 tRNA pseudouridine synthase M1S49_16425 PF01176 Translation initiation factor 1A / IF-1 M1S49_16440 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S49_16450 PF00694 Aconitase C-terminal domain M1S49_16455 PF00330 Aconitase family (aconitate hydratase) M1S49_16465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_16465 PF03466 LysR substrate binding domain M1S49_16485 PF00293 NUDIX domain M1S49_16490 PF05524 PEP-utilising enzyme, N-terminal M1S49_16490 PF00391 PEP-utilising enzyme, mobile domain M1S49_16490 PF02896 PEP-utilising enzyme, TIM barrel domain M1S49_16490 PF01590 GAF domain M1S49_16495 PF00141 Peroxidase M1S49_16500 PF12706 Beta-lactamase superfamily domain M1S49_16505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_16505 PF03466 LysR substrate binding domain M1S49_16515 PF02798 Glutathione S-transferase, N-terminal domain M1S49_16520 PF08279 HTH domain M1S49_16520 PF13280 WYL domain M1S49_16525 PF13419 Haloacid dehalogenase-like hydrolase M1S49_16530 PF00849 RNA pseudouridylate synthase M1S49_16530 PF01479 S4 domain M1S49_16535 PF10150 Ribonuclease E/G family M1S49_16535 PF00575 S1 RNA binding domain M1S49_16535 PF12111 Polyribonucleotide phosphorylase C terminal M1S49_16540 PF13193 AMP-binding enzyme C-terminal domain M1S49_16540 PF00501 AMP-binding enzyme M1S49_16555 PF03466 LysR substrate binding domain M1S49_16555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_16560 PF00106 short chain dehydrogenase M1S49_16565 PF06969 HemN C-terminal domain M1S49_16565 PF04055 Radical SAM superfamily M1S49_16575 PF01554 MatE M1S49_16580 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S49_16580 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_16580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_16585 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S49_16585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_16590 PF03109 ABC1 family M1S49_16595 PF01197 Ribosomal protein L31 M1S49_16610 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1S49_16630 PF03884 DNA gyrase inhibitor YacG M1S49_16635 PF00753 Metallo-beta-lactamase superfamily M1S49_16640 PF00762 Ferrochelatase M1S49_16650 PF01177 Asp/Glu/Hydantoin racemase M1S49_16665 PF01206 Sulfurtransferase TusA M1S49_16670 PF00571 CBS domain M1S49_16670 PF03471 Transporter associated domain M1S49_16675 PF00795 Carbon-nitrogen hydrolase M1S49_16680 PF01588 Putative tRNA binding domain M1S49_16690 PF07963 Prokaryotic N-terminal methylation motif M1S49_16690 PF08334 Type II secretion system (T2SS), protein G M1S49_16695 PF00482 Type II secretion system (T2SS), protein F M1S49_16700 PF00270 DEAD/DEAH box helicase M1S49_16700 PF00271 Helicase conserved C-terminal domain M1S49_16700 PF17764 3′ DNA-binding domain (3′BD) M1S49_16700 PF18074 Primosomal protein N C-terminal domain M1S49_16700 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M1S49_16705 PF00999 Sodium/hydrogen exchanger family M1S49_16705 PF02254 TrkA-N domain M1S49_16710 PF01430 Hsp33 protein M1S49_16720 PF00226 DnaJ domain M1S49_16720 PF01556 DnaJ C terminal domain M1S49_16730 PF01544 CorA-like Mg2+ transporter protein M1S49_16735 PF00013 KH domain M1S49_16735 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M1S49_16735 PF01138 3' exoribonuclease family, domain 1 M1S49_16735 PF03725 3' exoribonuclease family, domain 2 M1S49_16735 PF00575 S1 RNA binding domain M1S49_16740 PF00312 Ribosomal protein S15 M1S49_16745 PF00144 Beta-lactamase M1S49_16750 PF13538 UvrD-like helicase C-terminal domain M1S49_16755 PF00580 UvrD/REP helicase N-terminal domain M1S49_16755 PF13361 UvrD-like helicase C-terminal domain M1S49_16755 PF12705 PD-(D/E)XK nuclease superfamily M1S49_16760 PF17946 RecC C-terminal domain M1S49_16770 PF03976 Polyphosphate kinase 2 (PPK2) M1S49_16780 PF01209 ubiE/COQ5 methyltransferase family M1S49_16790 PF03109 ABC1 family M1S49_16795 PF01494 FAD binding domain M1S49_16800 PF01502 Phosphoribosyl-AMP cyclohydrolase M1S49_16815 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S49_16815 PF00361 Proton-conducting membrane transporter M1S49_16815 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M1S49_16815 PF13244 Domain of unknown function (DUF4040) M1S49_16820 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S49_16825 PF00361 Proton-conducting membrane transporter M1S49_16830 PF01899 Na+/H+ ion antiporter subunit M1S49_16835 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M1S49_16840 PF03334 Na+/H+ antiporter subunit M1S49_16845 PF02033 Ribosome-binding factor A M1S49_16850 PF00009 Elongation factor Tu GTP binding domain M1S49_16850 PF11987 Translation-initiation factor 2 M1S49_16850 PF08364 Bacterial translation initiation factor IF-2 associated region M1S49_16850 PF04760 Translation initiation factor IF-2, N-terminal region M1S49_16855 PF00575 S1 RNA binding domain M1S49_16855 PF13184 NusA-like KH domain M1S49_16855 PF08529 NusA N-terminal domain M1S49_16860 PF02576 RimP N-terminal domain M1S49_16860 PF17384 RimP C-terminal SH3 domain M1S49_16880 PF03840 Preprotein translocase SecG subunit M1S49_16885 PF00121 Triosephosphate isomerase M1S49_16890 PF00437 Type II/IV secretion system protein M1S49_16890 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S49_16895 PF00482 Type II secretion system (T2SS), protein F M1S49_16905 PF06750 Bacterial Peptidase A24 N-terminal domain M1S49_16905 PF01478 Type IV leader peptidase family M1S49_16910 PF01121 Dephospho-CoA kinase M1S49_16920 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S49_16920 PF00588 SpoU rRNA Methylase family M1S49_16925 PF06865 Pyrimidine/purine nucleoside phosphorylase M1S49_16935 PF02463 RecF/RecN/SMC N terminal domain M1S49_16940 PF02622 Uncharacterized ACR, COG1678 M1S49_16945 PF03652 Holliday junction resolvase M1S49_16950 PF13533 Biotin-lipoyl like M1S49_16975 PF02805 Metal binding domain of Ada M1S49_16975 PF12833 Helix-turn-helix domain M1S49_16975 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S49_16975 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S49_16980 PF01066 CDP-alcohol phosphatidyltransferase M1S49_16990 PF08459 UvrC Helix-hairpin-helix N-terminal M1S49_16990 PF01541 GIY-YIG catalytic domain M1S49_16990 PF02151 UvrB/uvrC motif M1S49_17010 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S49_17010 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S49_17010 PF00378 Enoyl-CoA hydratase/isomerase M1S49_17015 PF02803 Thiolase, C-terminal domain M1S49_17015 PF00108 Thiolase, N-terminal domain M1S49_17035 PF00376 MerR family regulatory protein M1S49_17035 PF09278 MerR, DNA binding M1S49_17045 PF01323 DSBA-like thioredoxin domain M1S49_17060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_17060 PF00183 Hsp90 protein M1S49_17075 PF13726 Na+-H+ antiporter family M1S49_17075 PF03553 Na+/H+ antiporter family M1S49_17080 PF00561 alpha/beta hydrolase fold M1S49_17100 PF00623 RNA polymerase Rpb1, domain 2 M1S49_17100 PF04983 RNA polymerase Rpb1, domain 3 M1S49_17100 PF05000 RNA polymerase Rpb1, domain 4 M1S49_17100 PF04998 RNA polymerase Rpb1, domain 5 M1S49_17100 PF04997 RNA polymerase Rpb1, domain 1 M1S49_17105 PF04561 RNA polymerase Rpb2, domain 2 M1S49_17105 PF04563 RNA polymerase beta subunit M1S49_17105 PF04565 RNA polymerase Rpb2, domain 3 M1S49_17105 PF00562 RNA polymerase Rpb2, domain 6 M1S49_17105 PF04560 RNA polymerase Rpb2, domain 7 M1S49_17105 PF10385 RNA polymerase beta subunit external 1 domain M1S49_17110 PF00542 Ribosomal protein L7/L12 C-terminal domain M1S49_17110 PF16320 Ribosomal protein L7/L12 dimerisation domain M1S49_17115 PF00466 Ribosomal protein L10 M1S49_17120 PF00687 Ribosomal protein L1p/L10e family M1S49_17125 PF00298 Ribosomal protein L11, RNA binding domain M1S49_17125 PF03946 Ribosomal protein L11, N-terminal domain M1S49_17130 PF00467 KOW motif M1S49_17130 PF02357 Transcription termination factor nusG M1S49_17135 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M1S49_17145 PF03144 Elongation factor Tu domain 2 M1S49_17145 PF00009 Elongation factor Tu GTP binding domain M1S49_17145 PF03143 Elongation factor Tu C-terminal domain M1S49_17170 PF00425 chorismate binding enzyme M1S49_17170 PF04715 Anthranilate synthase component I, N terminal region M1S49_17175 PF13419 Haloacid dehalogenase-like hydrolase M1S49_17180 PF00498 FHA domain M1S49_17180 PF12401 Protein of unknown function (DUF2662) M1S49_17185 PF00263 Bacterial type II and III secretion system protein M1S49_17185 PF03958 Bacterial type II/III secretion system short domain M1S49_17200 PF00816 H-NS histone family M1S49_17225 PF03900 Porphobilinogen deaminase, C-terminal domain M1S49_17225 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M1S49_17230 PF00072 Response regulator receiver domain M1S49_17230 PF04397 LytTr DNA-binding domain M1S49_17235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_17235 PF06580 Histidine kinase M1S49_17235 PF07694 5TMR of 5TMR-LYT M1S49_17240 PF14698 Argininosuccinate lyase C-terminal M1S49_17240 PF00206 Lyase M1S49_17245 PF04362 Bacterial Fe(2+) trafficking M1S49_17250 PF01895 PhoU domain M1S49_17255 PF02321 Outer membrane efflux protein M1S49_17260 PF00892 EamA-like transporter family M1S49_17275 PF13667 ThiC-associated domain M1S49_17275 PF01964 Radical SAM ThiC family M1S49_17280 PF00293 NUDIX domain M1S49_17285 PF00149 Calcineurin-like phosphoesterase M1S49_17290 PF01258 Prokaryotic dksA/traR C4-type zinc finger M1S49_17295 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S49_17300 PF01098 Cell cycle protein M1S49_17305 PF02875 Mur ligase family, glutamate ligase domain M1S49_17305 PF08245 Mur ligase middle domain M1S49_17315 PF07664 Ferrous iron transport protein B C terminus M1S49_17315 PF02421 Ferrous iron transport protein B M1S49_17315 PF07670 Nucleoside recognition M1S49_17325 PF02899 Phage integrase, N-terminal SAM-like domain M1S49_17325 PF00589 Phage integrase family M1S49_17330 PF10411 Disulfide bond isomerase protein N-terminus M1S49_17330 PF13098 Thioredoxin-like domain M1S49_17335 PF03447 Homoserine dehydrogenase, NAD binding domain M1S49_17335 PF01842 ACT domain M1S49_17335 PF00742 Homoserine dehydrogenase M1S49_17340 PF00291 Pyridoxal-phosphate dependent enzyme M1S49_17345 PF00768 D-alanyl-D-alanine carboxypeptidase M1S49_17350 PF00196 Bacterial regulatory proteins, luxR family M1S49_17350 PF00072 Response regulator receiver domain M1S49_17355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S49_17355 PF00512 His Kinase A (phospho-acceptor) domain M1S49_17360 PF00158 Sigma-54 interaction domain M1S49_17360 PF00072 Response regulator receiver domain M1S49_17360 PF02954 Bacterial regulatory protein, Fis family M1S49_17365 PF00595 PDZ domain M1S49_17365 PF03572 Peptidase family S41 M1S49_17370 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M1S49_17370 PF01676 Metalloenzyme superfamily M1S49_17375 PF03739 Lipopolysaccharide export system permease LptF/LptG M1S49_17385 PF02789 Cytosol aminopeptidase family, N-terminal domain M1S49_17385 PF00883 Cytosol aminopeptidase family, catalytic domain M1S49_17405 PF00677 Lumazine binding domain M1S49_17415 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S49_17415 PF01872 RibD C-terminal domain M1S49_17420 PF03477 ATP cone domain M1S49_17425 PF00909 Ammonium Transporter Family M1S49_17430 PF00543 Nitrogen regulatory protein P-II M1S49_17450 PF01636 Phosphotransferase enzyme family M1S49_17455 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M1S49_17475 PF02909 Tetracyclin repressor-like, C-terminal domain M1S49_17475 PF00440 Bacterial regulatory proteins, tetR family M1S49_17480 PF07690 Major Facilitator Superfamily M1S49_17490 PF00916 Sulfate permease family M1S49_17490 PF01740 STAS domain M1S49_17495 PF00582 Universal stress protein family M1S49_17525 PF00665 Integrase core domain M1S49_17535 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S49_17535 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S49_17535 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S49_17535 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S49_17540 PF00809 Pterin binding enzyme M1S49_17580 PF02899 Phage integrase, N-terminal SAM-like domain M1S49_17580 PF00589 Phage integrase family M1S49_17645 PF00665 Integrase core domain M1S49_17655 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S49_17655 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S49_17655 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S49_17655 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S49_17660 PF00809 Pterin binding enzyme M1S49_17700 PF00589 Phage integrase family M1S49_17700 PF02899 Phage integrase, N-terminal SAM-like domain M1S49_17730 PF01740 STAS domain M1S49_17730 PF00916 Sulfate permease family M1S49_17735 PF00582 Universal stress protein family M1S49_17755 PF00665 Integrase core domain M1S49_17770 PF00392 Bacterial regulatory proteins, gntR family M1S49_17770 PF00155 Aminotransferase class I and II M1S49_17780 PF00701 Dihydrodipicolinate synthetase family M1S49_17795 PF03573 outer membrane porin, OprD family M1S49_17800 PF00719 Inorganic pyrophosphatase M1S49_17815 PF13193 AMP-binding enzyme C-terminal domain M1S49_17815 PF00501 AMP-binding enzyme M1S49_17820 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S49_17820 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S49_17825 PF07690 Major Facilitator Superfamily M1S49_17830 PF03458 UPF0126 domain M1S49_17835 PF02810 SEC-C motif M1S49_17840 PF03471 Transporter associated domain M1S49_17840 PF03741 Integral membrane protein TerC family M1S49_17845 PF03641 Possible lysine decarboxylase M1S49_17850 PF07690 Major Facilitator Superfamily M1S49_17860 PF00817 impB/mucB/samB family M1S49_17860 PF11799 impB/mucB/samB family C-terminal domain M1S49_17860 PF11798 IMS family HHH motif M1S49_17885 PF11842 Domain of unknown function (DUF3362) M1S49_17885 PF04055 Radical SAM superfamily M1S49_17885 PF08497 Radical SAM N-terminal M1S49_17905 PF03358 NADPH-dependent FMN reductase M1S49_17915 PF00291 Pyridoxal-phosphate dependent enzyme M1S49_17975 PF01327 Polypeptide deformylase M1S49_17985 PF02481 DNA recombination-mediator protein A M1S49_17985 PF17782 DprA winged helix domain M1S49_17990 PF01300 Telomere recombination M1S49_17995 PF00892 EamA-like transporter family M1S49_18000 PF00440 Bacterial regulatory proteins, tetR family M1S49_18005 PF07690 Major Facilitator Superfamily M1S49_18015 PF00255 Glutathione peroxidase M1S49_18025 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M1S49_18030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S49_18030 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S49_18035 PF00231 ATP synthase M1S49_18040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S49_18040 PF00306 ATP synthase alpha/beta chain, C terminal domain M1S49_18040 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S49_18045 PF00213 ATP synthase delta (OSCP) subunit M1S49_18050 PF00430 ATP synthase B/B' CF(0) M1S49_18055 PF00137 ATP synthase subunit C M1S49_18060 PF00119 ATP synthase A chain M1S49_18080 PF00005 ABC transporter M1S49_18085 PF00950 ABC 3 transport family M1S49_18090 PF01810 LysE type translocator M1S49_18095 PF04261 Dyp-type peroxidase family M1S49_18105 PF00390 Malic enzyme, N-terminal domain M1S49_18105 PF03949 Malic enzyme, NAD binding domain M1S49_18110 PF03485 Arginyl tRNA synthetase N terminal domain M1S49_18110 PF05746 DALR anticodon binding domain M1S49_18110 PF00750 tRNA synthetases class I (R) M1S49_18130 PF02678 Pirin M1S49_18130 PF05726 Pirin C-terminal cupin domain M1S49_18140 PF03551 Transcriptional regulator PadR-like family M1S49_18145 PF01909 Nucleotidyltransferase domain M1S49_18145 PF13427 Domain of unknown function (DUF4111) M1S49_18150 PF00117 Glutamine amidotransferase class-I M1S49_18150 PF00958 GMP synthase C terminal domain M1S49_18150 PF02540 NAD synthase M1S49_18155 PF04286 Protein of unknown function (DUF445) M1S49_18160 PF07681 DoxX M1S49_18165 PF09335 SNARE associated Golgi protein M1S49_18180 PF13614 AAA domain M1S49_18190 PF01722 BolA-like protein M1S49_18205 PF01648 4'-phosphopantetheinyl transferase superfamily M1S49_18210 PF12697 Alpha/beta hydrolase family M1S49_18230 PF16197 Ketoacyl-synthetase C-terminal extension M1S49_18230 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S49_18230 PF08242 Methyltransferase domain M1S49_18230 PF14765 Polyketide synthase dehydratase M1S49_18230 PF00975 Thioesterase domain M1S49_18230 PF00550 Phosphopantetheine attachment site M1S49_18230 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S49_18235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_18235 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_18235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_18240 PF00501 AMP-binding enzyme M1S49_18245 PF03472 Autoinducer binding domain M1S49_18245 PF00196 Bacterial regulatory proteins, luxR family M1S49_18255 PF00765 Autoinducer synthase M1S49_18260 PF07690 Major Facilitator Superfamily M1S49_18260 PF00083 Sugar (and other) transporter M1S49_18265 PF00378 Enoyl-CoA hydratase/isomerase M1S49_18270 PF00378 Enoyl-CoA hydratase/isomerase M1S49_18275 PF02770 Acyl-CoA dehydrogenase, middle domain M1S49_18275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S49_18275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S49_18280 PF13193 AMP-binding enzyme C-terminal domain M1S49_18280 PF00501 AMP-binding enzyme M1S49_18285 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S49_18285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S49_18290 PF00171 Aldehyde dehydrogenase family M1S49_18300 PF00324 Amino acid permease M1S49_18305 PF00324 Amino acid permease M1S49_18310 PF01042 Endoribonuclease L-PSP M1S49_18315 PF00842 Alanine racemase, C-terminal domain M1S49_18315 PF01168 Alanine racemase, N-terminal domain M1S49_18320 PF01266 FAD dependent oxidoreductase M1S49_18325 PF01037 Lrp/AsnC ligand binding domain M1S49_18335 PF07715 TonB-dependent Receptor Plug Domain M1S49_18335 PF00593 TonB dependent receptor M1S49_18350 PF00849 RNA pseudouridylate synthase M1S49_18365 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S49_18365 PF00440 Bacterial regulatory proteins, tetR family M1S49_18375 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S49_18375 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S49_18420 PF00330 Aconitase family (aconitate hydratase) M1S49_18420 PF00694 Aconitase C-terminal domain M1S49_18425 PF00285 Citrate synthase, C-terminal domain M1S49_18435 PF07729 FCD domain M1S49_18435 PF00392 Bacterial regulatory proteins, gntR family M1S49_18450 PF01565 FAD binding domain M1S49_18450 PF09330 D-lactate dehydrogenase, membrane binding M1S49_18455 PF01070 FMN-dependent dehydrogenase M1S49_18460 PF07729 FCD domain M1S49_18460 PF00392 Bacterial regulatory proteins, gntR family M1S49_18465 PF02652 L-lactate permease M1S49_18470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S49_18470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S49_18470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S49_18470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S49_18475 PF16363 GDP-mannose 4,6 dehydratase M1S49_18480 PF00342 Phosphoglucose isomerase M1S49_18485 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S49_18485 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S49_18485 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S49_18490 PF00483 Nucleotidyl transferase M1S49_18495 PF02397 Bacterial sugar transferase M1S49_18515 PF07922 Glycosyltransferase family 52 M1S49_18520 PF01943 Polysaccharide biosynthesis protein M1S49_18525 PF03102 NeuB family M1S49_18525 PF08666 SAF domain M1S49_18540 PF02348 Cytidylyltransferase M1S49_18545 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M1S49_18550 PF02719 Polysaccharide biosynthesis protein M1S49_18555 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S49_18555 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S49_18555 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S49_18560 PF02563 Polysaccharide biosynthesis/export protein M1S49_18560 PF10531 SLBB domain M1S49_18560 PF18412 Outer-membrane lipoprotein Wza C-terminal domain M1S49_18565 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S49_18570 PF13614 AAA domain M1S49_18570 PF02706 Chain length determinant protein M1S49_18570 PF13807 G-rich domain on putative tyrosine kinase M1S49_18575 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S49_18575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S49_18580 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S49_18580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S49_18585 PF03023 Lipid II flippase MurJ M1S49_18590 PF01510 N-acetylmuramoyl-L-alanine amidase M1S49_18595 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M1S49_18595 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M1S49_18605 PF04185 Phosphoesterase family M1S49_18605 PF05506 Domain of unknown function (DUF756) M1S49_18615 PF03725 3' exoribonuclease family, domain 2 M1S49_18615 PF01138 3' exoribonuclease family, domain 1 M1S49_18620 PF00487 Fatty acid desaturase M1S49_18625 PF00175 Oxidoreductase NAD-binding domain M1S49_18630 PF00440 Bacterial regulatory proteins, tetR family M1S49_18635 PF00440 Bacterial regulatory proteins, tetR family M1S49_18635 PF08360 QacR-like protein, C-terminal region M1S49_18640 PF01323 DSBA-like thioredoxin domain M1S49_18650 PF13419 Haloacid dehalogenase-like hydrolase M1S49_18655 PF00106 short chain dehydrogenase M1S49_18670 PF00583 Acetyltransferase (GNAT) family M1S49_18670 PF00696 Amino acid kinase family M1S49_18675 PF09084 NMT1/THI5 like M1S49_18680 PF09084 NMT1/THI5 like M1S49_18685 PF00296 Luciferase-like monooxygenase M1S49_18690 PF00528 Binding-protein-dependent transport system inner membrane component M1S49_18695 PF00005 ABC transporter M1S49_18700 PF08362 YcdC-like protein, C-terminal region M1S49_18700 PF00440 Bacterial regulatory proteins, tetR family M1S49_18705 PF01048 Phosphorylase superfamily M1S49_18715 PF06574 FAD synthetase M1S49_18715 PF01687 Riboflavin kinase M1S49_18720 PF08264 Anticodon-binding domain of tRNA M1S49_18720 PF00133 tRNA synthetases class I (I, L, M and V) M1S49_18720 PF06827 Zinc finger found in FPG and IleRS M1S49_18725 PF01252 Signal peptidase (SPase) II M1S49_18730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S49_18770 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S49_18775 PF07859 alpha/beta hydrolase fold M1S49_18795 PF03466 LysR substrate binding domain M1S49_18795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S49_18800 PF01025 GrpE M1S49_18805 PF00012 Hsp70 protein M1S49_18825 PF13406 Transglycosylase SLT domain M1S49_18830 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M1S49_18830 PF02222 ATP-grasp domain M1S49_18835 PF00731 AIR carboxylase M1S49_18845 PF01225 Mur ligase family, catalytic domain M1S49_18845 PF02875 Mur ligase family, glutamate ligase domain M1S49_18845 PF08245 Mur ligase middle domain M1S49_18855 PF01569 PAP2 superfamily M1S49_18860 PF03741 Integral membrane protein TerC family M1S49_18870 PF03738 Glutathionylspermidine synthase preATP-grasp M1S49_18875 PF00355 Rieske [2Fe-2S] domain M1S49_18880 PF01979 Amidohydrolase family M1S49_18885 PF00156 Phosphoribosyl transferase domain M1S49_18895 PF13098 Thioredoxin-like domain M1S49_18895 PF10411 Disulfide bond isomerase protein N-terminus M1S49_18900 PF16916 Dimerisation domain of Zinc Transporter M1S49_18900 PF01545 Cation efflux family M1S49_18905 PF02583 Metal-sensitive transcriptional repressor M1S49_18910 PF10396 GTP-binding protein TrmE N-terminus M1S49_18910 PF12631 MnmE helical domain M1S49_18910 PF01926 50S ribosome-binding GTPase M1S49_18915 PF14849 YidC periplasmic domain M1S49_18915 PF02096 60Kd inner membrane protein M1S49_18920 PF01809 Putative membrane protein insertion efficiency factor M1S49_18925 PF00825 Ribonuclease P M1S49_18930 PF00468 Ribosomal protein L34 M1S49_18955 PF10410 DnaB-helicase binding domain of primase M1S49_18955 PF01807 CHC2 zinc finger M1S49_18955 PF08275 DNA primase catalytic core, N-terminal domain M1S49_18985 PF00625 Guanylate kinase M1S49_19000 PF07015 VirC1 protein M1S49_19010 PF00589 Phage integrase family M1S49_19010 PF02899 Phage integrase, N-terminal SAM-like domain M1S49_19045 PF14579 Helix-hairpin-helix motif M1S49_19045 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S49_19045 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S49_19045 PF02811 PHP domain M1S49_19055 PF02811 PHP domain M1S49_19055 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S49_19055 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S49_19055 PF14579 Helix-hairpin-helix motif M1S49_19070 PF01612 3'-5' exonuclease M1S49_19070 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S49_19070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S49_19070 PF00476 DNA polymerase family A M1S49_19075 PF00154 recA bacterial DNA recombination protein M1S49_19075 PF03161 LAGLIDADG DNA endonuclease family M1S49_19100 PF02463 RecF/RecN/SMC N terminal domain M1S49_19100 PF06470 SMC proteins Flexible Hinge Domain M1S49_19120 PF00317 Ribonucleotide reductase, all-alpha domain M1S49_19120 PF02867 Ribonucleotide reductase, barrel domain M1S49_19120 PF03477 ATP cone domain M1S49_19125 PF00268 Ribonucleotide reductase, small chain M1S49_19165 PF00929 Exonuclease M1S49_19200 PF13737 Transposase DDE domain M1S49_19210 PF16925 Tetracyclin repressor-like, C-terminal domain M1S49_19210 PF00440 Bacterial regulatory proteins, tetR family M1S49_19220 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S49_19230 PF00465 Iron-containing alcohol dehydrogenase M1S49_19245 PF00756 Putative esterase M1S49_19250 PF08240 Alcohol dehydrogenase GroES-like domain M1S49_19250 PF00107 Zinc-binding dehydrogenase M1S49_19255 PF02583 Metal-sensitive transcriptional repressor M1S49_19270 PF00107 Zinc-binding dehydrogenase M1S49_19270 PF08240 Alcohol dehydrogenase GroES-like domain M1S49_19270 PF13823 Alcohol dehydrogenase GroES-associated M1S49_19335 PF02216 B domain M1S49_19335 PF00746 LPXTG cell wall anchor motif M1S49_19335 PF01476 LysM domain M1S49_19335 PF03373 Octapeptide repeat M1S49_19335 PF04650 YSIRK type signal peptide M1S49_19350 PF02559 CarD-like/TRCF domain M1S49_19350 PF00270 DEAD/DEAH box helicase M1S49_19350 PF00271 Helicase conserved C-terminal domain M1S49_19350 PF03461 TRCF domain M1S49_19350 PF17757 UvrB interaction domain M1S49_19370 PF09383 NIL domain M1S49_19370 PF00005 ABC transporter M1S49_19530 PF13614 AAA domain M1S49_19640 PF00226 DnaJ domain M1S49_19640 PF01556 DnaJ C terminal domain M1S49_19640 PF00684 DnaJ central domain M1S49_19665 PF18272 single-stranded DNA binding TraI N-terminal subdomain M1S49_19665 PF07057 DNA helicase TraI M1S49_19665 PF18340 DNA relaxase TraI 2B/2B-like domain M1S49_19665 PF08751 TrwC relaxase M1S49_19725 PF02796 Helix-turn-helix domain of resolvase M1S49_19725 PF00239 Resolvase, N terminal domain M1S49_19775 PF10411 Disulfide bond isomerase protein N-terminus M1S49_19775 PF13098 Thioredoxin-like domain M1S49_19805 PF06834 TraU protein M1S49_19815 PF06986 Type-1V conjugative transfer system mating pair stabilisation M1S49_19825 PF06122 Conjugative relaxosome accessory transposon protein M1S49_19845 PF11799 impB/mucB/samB family C-terminal domain M1S49_19845 PF13438 Domain of unknown function (DUF4113) M1S49_19845 PF00817 impB/mucB/samB family M1S49_19900 PF00565 Staphylococcal nuclease homologue M1S49_19915 PF00816 H-NS histone family