locus-tag class description M1S25_00005 PF00308 Bacterial dnaA protein M1S25_00005 PF08299 Bacterial dnaA protein helix-turn-helix M1S25_00005 PF11638 DnaA N-terminal domain M1S25_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S25_00010 PF02767 DNA polymerase III beta subunit, central domain M1S25_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S25_00015 PF02463 RecF/RecN/SMC N terminal domain M1S25_00020 PF00204 DNA gyrase B M1S25_00020 PF00986 DNA gyrase B subunit, carboxyl terminus M1S25_00020 PF18053 DNA gyrase B subunit insert domain M1S25_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_00020 PF01751 Toprim domain M1S25_00030 PF09335 SNARE associated Golgi protein M1S25_00035 PF00005 ABC transporter M1S25_00035 PF12848 ABC transporter M1S25_00055 PF01521 Iron-sulphur cluster biosynthesis M1S25_00060 PF00561 alpha/beta hydrolase fold M1S25_00065 PF03702 Anhydro-N-acetylmuramic acid kinase M1S25_00070 PF00579 tRNA synthetases class I (W and Y) M1S25_00110 PF00209 Sodium:neurotransmitter symporter family M1S25_00120 PF01189 16S rRNA methyltransferase RsmB/F M1S25_00120 PF01029 NusB family M1S25_00125 PF02911 Formyl transferase, C-terminal domain M1S25_00125 PF00551 Formyl transferase M1S25_00130 PF00920 Dehydratase family M1S25_00145 PF03466 LysR substrate binding domain M1S25_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_00150 PF00860 Permease family M1S25_00155 PF00311 Phosphoenolpyruvate carboxylase M1S25_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S25_00160 PF00440 Bacterial regulatory proteins, tetR family M1S25_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S25_00170 PF00873 AcrB/AcrD/AcrF family M1S25_00180 PF00684 DnaJ central domain M1S25_00180 PF01556 DnaJ C terminal domain M1S25_00180 PF00226 DnaJ domain M1S25_00190 PF05173 Dihydrodipicolinate reductase, C-terminus M1S25_00190 PF01113 Dihydrodipicolinate reductase, N-terminus M1S25_00200 PF07690 Major Facilitator Superfamily M1S25_00205 PF00248 Aldo/keto reductase family M1S25_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_00210 PF03466 LysR substrate binding domain M1S25_00225 PF00392 Bacterial regulatory proteins, gntR family M1S25_00225 PF00155 Aminotransferase class I and II M1S25_00230 PF08240 Alcohol dehydrogenase GroES-like domain M1S25_00230 PF00107 Zinc-binding dehydrogenase M1S25_00235 PF03352 Methyladenine glycosylase M1S25_00250 PF14815 NUDIX domain M1S25_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S25_00250 PF00633 Helix-hairpin-helix motif M1S25_00250 PF10576 Iron-sulfur binding domain of endonuclease III M1S25_00265 PF07043 Protein of unknown function (DUF1328) M1S25_00270 PF03692 Putative zinc- or iron-chelating domain M1S25_00275 PF07995 Glucose / Sorbosone dehydrogenase M1S25_00280 PF00004 ATPase family associated with various cellular activities (AAA) M1S25_00280 PF16193 AAA C-terminal domain M1S25_00280 PF12002 MgsA AAA+ ATPase C terminal M1S25_00285 PF01226 Formate/nitrite transporter M1S25_00295 PF01259 SAICAR synthetase M1S25_00305 PF00701 Dihydrodipicolinate synthetase family M1S25_00310 PF00857 Isochorismatase family M1S25_00315 PF01758 Sodium Bile acid symporter family M1S25_00320 PF01554 MatE M1S25_00325 PF04463 Protein of unknown function (DUF523) M1S25_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S25_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S25_00345 PF02798 Glutathione S-transferase, N-terminal domain M1S25_00345 PF14497 Glutathione S-transferase, C-terminal domain M1S25_00355 PF00324 Amino acid permease M1S25_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S25_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S25_00375 PF00392 Bacterial regulatory proteins, gntR family M1S25_00375 PF07702 UTRA domain M1S25_00380 PF05962 HutD M1S25_00385 PF17392 Urocanase C-terminal domain M1S25_00385 PF01175 Urocanase Rossmann-like domain M1S25_00385 PF17391 Urocanase N-terminal domain M1S25_00390 PF00221 Aromatic amino acid lyase M1S25_00395 PF00324 Amino acid permease M1S25_00400 PF01979 Amidohydrolase family M1S25_00405 PF00491 Arginase family M1S25_00420 PF01177 Asp/Glu/Hydantoin racemase M1S25_00425 PF01380 SIS domain M1S25_00430 PF00132 Bacterial transferase hexapeptide (six repeats) M1S25_00430 PF14602 Hexapeptide repeat of succinyl-transferase M1S25_00430 PF12804 MobA-like NTP transferase domain M1S25_00435 PF04608 Phosphatidylglycerophosphatase A M1S25_00440 PF02769 AIR synthase related protein, C-terminal domain M1S25_00440 PF00586 AIR synthase related protein, N-terminal domain M1S25_00445 PF01029 NusB family M1S25_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase M1S25_00455 PF00925 GTP cyclohydrolase II M1S25_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S25_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase M1S25_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M1S25_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S25_00490 PF00581 Rhodanese-like domain M1S25_00495 PF02666 Phosphatidylserine decarboxylase M1S25_00500 PF03069 Acetamidase/Formamidase family M1S25_00520 PF00989 PAS fold M1S25_00520 PF11808 Phosphate regulon sensor protein PhoR M1S25_00520 PF00512 His Kinase A (phospho-acceptor) domain M1S25_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_00525 PF00072 Response regulator receiver domain M1S25_00525 PF00486 Transcriptional regulatory protein, C terminal M1S25_00535 PF00106 short chain dehydrogenase M1S25_00540 PF01554 MatE M1S25_00545 PF00155 Aminotransferase class I and II M1S25_00550 PF04286 Protein of unknown function (DUF445) M1S25_00565 PF04262 Glutamate-cysteine ligase M1S25_00570 PF02600 Disulfide bond formation protein DsbB M1S25_00575 PF04717 Type VI secretion system, phage-baseplate injector M1S25_00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S25_00575 PF13296 Putative type VI secretion system Rhs element Vgr M1S25_00580 PF00877 NlpC/P60 family M1S25_00580 PF01476 LysM domain M1S25_00595 PF05728 Uncharacterised protein family (UPF0227) M1S25_00600 PF01751 Toprim domain M1S25_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_00600 PF00986 DNA gyrase B subunit, carboxyl terminus M1S25_00600 PF00204 DNA gyrase B M1S25_00605 PF00106 short chain dehydrogenase M1S25_00610 PF04115 Ureidoglycolate lyase M1S25_00615 PF03561 Allantoicase repeat M1S25_00620 PF01494 FAD binding domain M1S25_00630 PF00860 Permease family M1S25_00635 PF00576 HIUase/Transthyretin family M1S25_00665 PF02683 Cytochrome C biogenesis protein transmembrane region M1S25_00665 PF11412 Disulphide bond corrector protein DsbC M1S25_00670 PF00990 Diguanylate cyclase, GGDEF domain M1S25_00670 PF07694 5TMR of 5TMR-LYT M1S25_00675 PF07859 alpha/beta hydrolase fold M1S25_00685 PF03960 ArsC family M1S25_00690 PF03372 Endonuclease/Exonuclease/phosphatase family M1S25_00695 PF00156 Phosphoribosyl transferase domain M1S25_00700 PF00593 TonB dependent receptor M1S25_00700 PF07715 TonB-dependent Receptor Plug Domain M1S25_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M1S25_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M1S25_00715 PF03033 Glycosyltransferase family 28 N-terminal domain M1S25_00715 PF04101 Glycosyltransferase family 28 C-terminal domain M1S25_00720 PF08245 Mur ligase middle domain M1S25_00720 PF02875 Mur ligase family, glutamate ligase domain M1S25_00720 PF01225 Mur ligase family, catalytic domain M1S25_00725 PF01820 D-ala D-ala ligase N-terminus M1S25_00725 PF07478 D-ala D-ala ligase C-terminus M1S25_00730 PF08478 POTRA domain, FtsQ-type M1S25_00730 PF03799 Cell division protein FtsQ M1S25_00735 PF02491 SHS2 domain inserted in FTSA M1S25_00740 PF00091 Tubulin/FtsZ family, GTPase domain M1S25_00740 PF12327 FtsZ family, C-terminal domain M1S25_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M1S25_00755 PF01551 Peptidase family M23 M1S25_00760 PF00456 Transketolase, thiamine diphosphate binding domain M1S25_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain M1S25_00765 PF02817 e3 binding domain M1S25_00765 PF00364 Biotin-requiring enzyme M1S25_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S25_00775 PF01169 Uncharacterized protein family UPF0016 M1S25_00795 PF00258 Flavodoxin M1S25_00795 PF01613 Flavin reductase like domain M1S25_00800 PF03692 Putative zinc- or iron-chelating domain M1S25_00805 PF00478 IMP dehydrogenase / GMP reductase domain M1S25_00805 PF00571 CBS domain M1S25_00810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S25_00810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S25_00810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S25_00810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S25_00815 PF01243 Pyridoxamine 5'-phosphate oxidase M1S25_00815 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M1S25_00820 PF17768 RecJ OB domain M1S25_00820 PF02272 DHHA1 domain M1S25_00820 PF01368 DHH family M1S25_00840 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S25_00850 PF04452 RNA methyltransferase M1S25_00855 PF00924 Mechanosensitive ion channel M1S25_00865 PF13193 AMP-binding enzyme C-terminal domain M1S25_00865 PF00501 AMP-binding enzyme M1S25_00865 PF16177 Acetyl-coenzyme A synthetase N-terminus M1S25_00870 PF00857 Isochorismatase family M1S25_00875 PF01037 Lrp/AsnC ligand binding domain M1S25_00880 PF00872 Transposase, Mutator family M1S25_00885 PF00296 Luciferase-like monooxygenase M1S25_00890 PF03358 NADPH-dependent FMN reductase M1S25_00895 PF00072 Response regulator receiver domain M1S25_00895 PF00196 Bacterial regulatory proteins, luxR family M1S25_00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_00905 PF00672 HAMP domain M1S25_00905 PF00072 Response regulator receiver domain M1S25_00905 PF01627 Hpt domain M1S25_00905 PF00512 His Kinase A (phospho-acceptor) domain M1S25_00910 PF04341 Protein of unknown function, DUF485 M1S25_00915 PF00474 Sodium:solute symporter family M1S25_00925 PF02028 BCCT, betaine/carnitine/choline family transporter M1S25_00935 PF00990 Diguanylate cyclase, GGDEF domain M1S25_00945 PF00005 ABC transporter M1S25_00945 PF17760 UvrA interaction domain M1S25_00945 PF17755 UvrA DNA-binding domain M1S25_00950 PF16925 Tetracyclin repressor-like, C-terminal domain M1S25_00950 PF00440 Bacterial regulatory proteins, tetR family M1S25_00955 PF08240 Alcohol dehydrogenase GroES-like domain M1S25_00955 PF00107 Zinc-binding dehydrogenase M1S25_00965 PF06942 GlpM protein M1S25_00970 PF08543 Phosphomethylpyrimidine kinase M1S25_00970 PF02581 Thiamine monophosphate synthase M1S25_00970 PF03070 TENA/THI-4/PQQC family M1S25_00980 PF07690 Major Facilitator Superfamily M1S25_00985 PF00436 Single-strand binding protein family M1S25_00995 PF03591 AzlC protein M1S25_01005 PF00324 Amino acid permease M1S25_01010 PF00392 Bacterial regulatory proteins, gntR family M1S25_01010 PF00155 Aminotransferase class I and II M1S25_01015 PF00202 Aminotransferase class-III M1S25_01020 PF00171 Aldehyde dehydrogenase family M1S25_01025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_01030 PF00857 Isochorismatase family M1S25_01035 PF05726 Pirin C-terminal cupin domain M1S25_01035 PF02678 Pirin M1S25_01040 PF01593 Flavin containing amine oxidoreductase M1S25_01060 PF07690 Major Facilitator Superfamily M1S25_01065 PF03466 LysR substrate binding domain M1S25_01065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_01085 PF00248 Aldo/keto reductase family M1S25_01090 PF02311 AraC-like ligand binding domain M1S25_01090 PF12833 Helix-turn-helix domain M1S25_01120 PF01638 HxlR-like helix-turn-helix M1S25_01125 PF02525 Flavodoxin-like fold M1S25_01145 PF02705 K+ potassium transporter M1S25_01170 PF00230 Major intrinsic protein M1S25_01185 PF00977 Histidine biosynthesis protein M1S25_01190 PF01636 Phosphotransferase enzyme family M1S25_01205 PF03992 Antibiotic biosynthesis monooxygenase M1S25_01220 PF00977 Histidine biosynthesis protein M1S25_01235 PF00117 Glutamine amidotransferase class-I M1S25_01240 PF00475 Imidazoleglycerol-phosphate dehydratase M1S25_01260 PF00583 Acetyltransferase (GNAT) family M1S25_01265 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M1S25_01265 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M1S25_01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_01275 PF00672 HAMP domain M1S25_01275 PF00512 His Kinase A (phospho-acceptor) domain M1S25_01280 PF00486 Transcriptional regulatory protein, C terminal M1S25_01280 PF00072 Response regulator receiver domain M1S25_01285 PF00575 S1 RNA binding domain M1S25_01285 PF09371 Tex-like protein N-terminal domain M1S25_01285 PF16921 Tex protein YqgF-like domain M1S25_01285 PF17674 HHH domain M1S25_01290 PF00916 Sulfate permease family M1S25_01290 PF01740 STAS domain M1S25_01295 PF00106 short chain dehydrogenase M1S25_01300 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S25_01305 PF00005 ABC transporter M1S25_01305 PF12848 ABC transporter M1S25_01330 PF04191 Phospholipid methyltransferase M1S25_01350 PF00529 HlyD membrane-fusion protein of T1SS M1S25_01350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S25_01355 PF00873 AcrB/AcrD/AcrF family M1S25_01360 PF01545 Cation efflux family M1S25_01390 PF00324 Amino acid permease M1S25_01405 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S25_01420 PF01795 MraW methylase family M1S25_01430 PF03717 Penicillin-binding Protein dimerisation domain M1S25_01430 PF00905 Penicillin binding protein transpeptidase domain M1S25_01435 PF02875 Mur ligase family, glutamate ligase domain M1S25_01435 PF01225 Mur ligase family, catalytic domain M1S25_01435 PF08245 Mur ligase middle domain M1S25_01440 PF08245 Mur ligase middle domain M1S25_01440 PF02875 Mur ligase family, glutamate ligase domain M1S25_01440 PF01225 Mur ligase family, catalytic domain M1S25_01445 PF00953 Glycosyl transferase family 4 M1S25_01455 PF13847 Methyltransferase domain M1S25_01460 PF17092 Penicillin-binding protein OB-like domain M1S25_01460 PF00905 Penicillin binding protein transpeptidase domain M1S25_01460 PF00912 Transglycosylase M1S25_01465 PF11104 Type IV pilus assembly protein PilM; M1S25_01470 PF05137 Fimbrial assembly protein (PilN) M1S25_01475 PF04350 Pilus assembly protein, PilO M1S25_01485 PF00263 Bacterial type II and III secretion system protein M1S25_01485 PF11741 AMIN domain M1S25_01485 PF03958 Bacterial type II/III secretion system short domain M1S25_01485 PF07660 Secretin and TonB N terminus short domain M1S25_01490 PF01202 Shikimate kinase M1S25_01495 PF01761 3-dehydroquinate synthase M1S25_01505 PF04898 Glutamate synthase central domain M1S25_01505 PF01645 Conserved region in glutamate synthase M1S25_01505 PF01493 GXGXG motif M1S25_01505 PF00310 Glutamine amidotransferases class-II M1S25_01510 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M1S25_01510 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_01520 PF04011 LemA family M1S25_01525 PF04536 TPM domain M1S25_01535 PF07963 Prokaryotic N-terminal methylation motif M1S25_01535 PF00114 Pilin (bacterial filament) M1S25_01545 PF15864 Protein glycosylation ligase M1S25_01545 PF04932 O-Antigen ligase M1S25_01545 PF11846 Virulence factor membrane-bound polymerase, C-terminal M1S25_01550 PF00210 Ferritin-like domain M1S25_01555 PF04324 BFD-like [2Fe-2S] binding domain M1S25_01560 PF01042 Endoribonuclease L-PSP M1S25_01565 PF04607 Region found in RelA / SpoT proteins M1S25_01565 PF02824 TGS domain M1S25_01565 PF13291 ACT domain M1S25_01575 PF01192 RNA polymerase Rpb6 M1S25_01580 PF00625 Guanylate kinase M1S25_01585 PF02401 LytB protein M1S25_01625 PF00886 Ribosomal protein S16 M1S25_01630 PF01782 RimM N-terminal domain M1S25_01630 PF05239 PRC-barrel domain M1S25_01635 PF01746 tRNA (Guanine-1)-methyltransferase M1S25_01640 PF01245 Ribosomal protein L19 M1S25_01645 PF00561 alpha/beta hydrolase fold M1S25_01650 PF03280 Proteobacterial lipase chaperone protein M1S25_01655 PF16198 tRNA pseudouridylate synthase B C-terminal domain M1S25_01655 PF01509 TruB family pseudouridylate synthase (N terminal domain) M1S25_01655 PF09157 Pseudouridine synthase II TruB, C-terminal M1S25_01660 PF01925 Sulfite exporter TauE/SafE M1S25_01670 PF00892 EamA-like transporter family M1S25_01675 PF00892 EamA-like transporter family M1S25_01680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S25_01680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S25_01685 PF02913 FAD linked oxidases, C-terminal domain M1S25_01685 PF01565 FAD binding domain M1S25_01695 PF03992 Antibiotic biosynthesis monooxygenase M1S25_01700 PF02525 Flavodoxin-like fold M1S25_01710 PF07690 Major Facilitator Superfamily M1S25_01715 PF12805 FUSC-like inner membrane protein yccS M1S25_01720 PF00080 Copper/zinc superoxide dismutase (SODC) M1S25_01725 PF01594 AI-2E family transporter M1S25_01730 PF13614 AAA domain M1S25_01760 PF00324 Amino acid permease M1S25_01765 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S25_01765 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S25_01770 PF00202 Aminotransferase class-III M1S25_01775 PF04958 Arginine N-succinyltransferase beta subunit M1S25_01780 PF00171 Aldehyde dehydrogenase family M1S25_01785 PF04996 Succinylarginine dihydrolase M1S25_01790 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M1S25_01805 PF05922 Peptidase inhibitor I9 M1S25_01805 PF00082 Subtilase family M1S25_01820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_01820 PF03466 LysR substrate binding domain M1S25_01825 PF00892 EamA-like transporter family M1S25_01835 PF02092 Glycyl-tRNA synthetase beta subunit M1S25_01835 PF05746 DALR anticodon binding domain M1S25_01840 PF02091 Glycyl-tRNA synthetase alpha subunit M1S25_01865 PF00571 CBS domain M1S25_01870 PF04024 PspC domain M1S25_01880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_01880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_01880 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_01880 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S25_01890 PF08501 Shikimate dehydrogenase substrate binding domain M1S25_01890 PF01488 Shikimate / quinate 5-dehydrogenase M1S25_01890 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M1S25_01895 PF01218 Coproporphyrinogen III oxidase M1S25_01900 PF00925 GTP cyclohydrolase II M1S25_01905 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M1S25_01905 PF02779 Transketolase, pyrimidine binding domain M1S25_01905 PF02780 Transketolase, C-terminal domain M1S25_01910 PF00459 Inositol monophosphatase family M1S25_01915 PF00271 Helicase conserved C-terminal domain M1S25_01915 PF12343 Cold shock protein DEAD box A M1S25_01915 PF03880 DbpA RNA binding domain M1S25_01915 PF00270 DEAD/DEAH box helicase M1S25_01925 PF00005 ABC transporter M1S25_01930 PF02405 Permease MlaE M1S25_01940 PF05494 MlaC protein M1S25_01950 PF01544 CorA-like Mg2+ transporter protein M1S25_01955 PF03641 Possible lysine decarboxylase M1S25_01960 PF00293 NUDIX domain M1S25_01965 PF00156 Phosphoribosyl transferase domain M1S25_01970 PF00270 DEAD/DEAH box helicase M1S25_01970 PF00271 Helicase conserved C-terminal domain M1S25_01970 PF17191 RecG wedge domain M1S25_01985 PF01553 Acyltransferase M1S25_01995 PF00375 Sodium:dicarboxylate symporter family M1S25_02005 PF01926 50S ribosome-binding GTPase M1S25_02010 PF02082 Transcriptional regulator M1S25_02015 PF00970 Oxidoreductase FAD-binding domain M1S25_02015 PF00042 Globin M1S25_02015 PF00175 Oxidoreductase NAD-binding domain M1S25_02020 PF05872 Bacterial protein of unknown function (DUF853) M1S25_02025 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S25_02030 PF00117 Glutamine amidotransferase class-I M1S25_02035 PF00338 Ribosomal protein S10p/S20e M1S25_02040 PF00297 Ribosomal protein L3 M1S25_02045 PF00573 Ribosomal protein L4/L1 family M1S25_02050 PF00276 Ribosomal protein L23 M1S25_02055 PF03947 Ribosomal Proteins L2, C-terminal domain M1S25_02055 PF00181 Ribosomal Proteins L2, RNA binding domain M1S25_02060 PF00203 Ribosomal protein S19 M1S25_02065 PF00237 Ribosomal protein L22p/L17e M1S25_02075 PF00252 Ribosomal protein L16p/L10e M1S25_02080 PF00831 Ribosomal L29 protein M1S25_02085 PF00366 Ribosomal protein S17 M1S25_02090 PF00238 Ribosomal protein L14p/L23e M1S25_02095 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M1S25_02095 PF00467 KOW motif M1S25_02100 PF00281 Ribosomal protein L5 M1S25_02100 PF00673 ribosomal L5P family C-terminus M1S25_02105 PF00253 Ribosomal protein S14p/S29e M1S25_02110 PF00410 Ribosomal protein S8 M1S25_02115 PF00347 Ribosomal protein L6 M1S25_02120 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M1S25_02125 PF00333 Ribosomal protein S5, N-terminal domain M1S25_02125 PF03719 Ribosomal protein S5, C-terminal domain M1S25_02130 PF00327 Ribosomal protein L30p/L7e M1S25_02135 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M1S25_02140 PF00344 SecY translocase M1S25_02145 PF00444 Ribosomal protein L36 M1S25_02150 PF00416 Ribosomal protein S13/S18 M1S25_02155 PF00411 Ribosomal protein S11 M1S25_02160 PF00163 Ribosomal protein S4/S9 N-terminal domain M1S25_02160 PF01479 S4 domain M1S25_02165 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M1S25_02165 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M1S25_02165 PF01000 RNA polymerase Rpb3/RpoA insert domain M1S25_02170 PF01196 Ribosomal protein L17 M1S25_02175 PF00743 Flavin-binding monooxygenase-like M1S25_02180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_02180 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_02180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_02185 PF03937 Flavinator of succinate dehydrogenase M1S25_02215 PF09526 Probable metal-binding protein (DUF2387) M1S25_02220 PF01432 Peptidase family M3 M1S25_02225 PF17876 Cold shock domain M1S25_02225 PF08461 Ribonuclease R winged-helix domain M1S25_02225 PF08206 Ribonuclease B OB domain M1S25_02225 PF00773 RNB domain M1S25_02225 PF00575 S1 RNA binding domain M1S25_02270 PF01557 Fumarylacetoacetate (FAA) hydrolase family M1S25_02275 PF12833 Helix-turn-helix domain M1S25_02280 PF00892 EamA-like transporter family M1S25_02285 PF03631 Virulence factor BrkB M1S25_02290 PF03358 NADPH-dependent FMN reductase M1S25_02315 PF02130 Uncharacterized protein family UPF0054 M1S25_02320 PF02562 PhoH-like protein M1S25_02325 PF04055 Radical SAM superfamily M1S25_02325 PF01938 TRAM domain M1S25_02325 PF00919 Uncharacterized protein family UPF0004 M1S25_02330 PF01551 Peptidase family M23 M1S25_02330 PF10145 Phage-related minor tail protein M1S25_02330 PF01464 Transglycosylase SLT domain M1S25_02340 PF00056 lactate/malate dehydrogenase, NAD binding domain M1S25_02340 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1S25_02360 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M1S25_02365 PF01066 CDP-alcohol phosphatidyltransferase M1S25_02410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_02410 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_02410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_02415 PF00440 Bacterial regulatory proteins, tetR family M1S25_02415 PF17932 Tetracyclin repressor-like, C-terminal domain M1S25_02430 PF01039 Carboxyl transferase domain M1S25_02435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_02435 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_02435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_02445 PF00364 Biotin-requiring enzyme M1S25_02445 PF00289 Biotin carboxylase, N-terminal domain M1S25_02445 PF02785 Biotin carboxylase C-terminal domain M1S25_02445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S25_02455 PF04386 Stringent starvation protein B M1S25_02460 PF00043 Glutathione S-transferase, C-terminal domain M1S25_02460 PF13417 Glutathione S-transferase, N-terminal domain M1S25_02465 PF00380 Ribosomal protein S9/S16 M1S25_02470 PF00572 Ribosomal protein L13 M1S25_02475 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M1S25_02480 PF00398 Ribosomal RNA adenine dimethylase M1S25_02485 PF00149 Calcineurin-like phosphoesterase M1S25_02505 PF01926 50S ribosome-binding GTPase M1S25_02505 PF13167 GTP-binding GTPase N-terminal M1S25_02505 PF16360 GTP-binding GTPase Middle Region M1S25_02515 PF13091 PLD-like domain M1S25_02520 PF00149 Calcineurin-like phosphoesterase M1S25_02520 PF10518 TAT (twin-arginine translocation) pathway signal sequence M1S25_02525 PF01389 OmpA-like transmembrane domain M1S25_02525 PF00691 OmpA family M1S25_02565 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_02565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S25_02575 PF04273 Putative phosphatase (DUF442) M1S25_02575 PF00753 Metallo-beta-lactamase superfamily M1S25_02580 PF00561 alpha/beta hydrolase fold M1S25_02585 PF00085 Thioredoxin M1S25_02590 PF03061 Thioesterase superfamily M1S25_02600 PF04461 Protein of unknown function (DUF520) M1S25_02610 PF01266 FAD dependent oxidoreductase M1S25_02610 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S25_02620 PF03795 YCII-related domain M1S25_02625 PF04279 Intracellular septation protein A M1S25_02630 PF02811 PHP domain M1S25_02635 PF01062 Bestrophin, RFP-TM, chloride channel M1S25_02640 PF04002 RadC-like JAB domain M1S25_02645 PF04127 DNA / pantothenate metabolism flavoprotein M1S25_02645 PF02441 Flavoprotein M1S25_02650 PF07549 SecD/SecF GG Motif M1S25_02650 PF02355 Protein export membrane protein M1S25_02655 PF07549 SecD/SecF GG Motif M1S25_02655 PF13721 SecD export protein N-terminal TM region M1S25_02655 PF02355 Protein export membrane protein M1S25_02660 PF02699 Preprotein translocase subunit M1S25_02665 PF01702 Queuine tRNA-ribosyltransferase M1S25_02680 PF02547 Queuosine biosynthesis protein M1S25_02710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_02710 PF00512 His Kinase A (phospho-acceptor) domain M1S25_02710 PF07689 KaiB domain M1S25_02715 PF08335 GlnD PII-uridylyltransferase M1S25_02715 PF03710 Glutamate-ammonia ligase adenylyltransferase M1S25_02720 PF01063 Amino-transferase class IV M1S25_02735 PF01522 Polysaccharide deacetylase M1S25_02740 PF00535 Glycosyl transferase family 2 M1S25_02745 PF00534 Glycosyl transferases group 1 M1S25_02745 PF13439 Glycosyltransferase Family 4 M1S25_02770 PF17101 Stealth protein CR1, conserved region 1 M1S25_02770 PF11380 Stealth protein CR2, conserved region 2 M1S25_02770 PF17102 Stealth protein CR3, conserved region 3 M1S25_02775 PF02938 GAD domain M1S25_02775 PF00152 tRNA synthetases class II (D, K and N) M1S25_02775 PF01336 OB-fold nucleic acid binding domain M1S25_02785 PF00593 TonB dependent receptor M1S25_02785 PF07715 TonB-dependent Receptor Plug Domain M1S25_02805 PF06146 Phosphate-starvation-inducible E M1S25_02810 PF00043 Glutathione S-transferase, C-terminal domain M1S25_02810 PF02798 Glutathione S-transferase, N-terminal domain M1S25_02815 PF03466 LysR substrate binding domain M1S25_02815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_02820 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_02820 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S25_02820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_02820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_02825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_02825 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S25_02825 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_02825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_02835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_02835 PF00672 HAMP domain M1S25_02835 PF00512 His Kinase A (phospho-acceptor) domain M1S25_02840 PF00072 Response regulator receiver domain M1S25_02840 PF00486 Transcriptional regulatory protein, C terminal M1S25_02845 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M1S25_02865 PF01923 Cobalamin adenosyltransferase M1S25_02870 PF00593 TonB dependent receptor M1S25_02870 PF07715 TonB-dependent Receptor Plug Domain M1S25_02875 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M1S25_02880 PF00291 Pyridoxal-phosphate dependent enzyme M1S25_02905 PF00290 Tryptophan synthase alpha chain M1S25_02910 PF01039 Carboxyl transferase domain M1S25_02915 PF02875 Mur ligase family, glutamate ligase domain M1S25_02915 PF08245 Mur ligase middle domain M1S25_02930 PF00753 Metallo-beta-lactamase superfamily M1S25_02935 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S25_02935 PF00578 AhpC/TSA family M1S25_02940 PF01043 SecA preprotein cross-linking domain M1S25_02940 PF02810 SEC-C motif M1S25_02940 PF07517 SecA DEAD-like domain M1S25_02940 PF07516 SecA Wing and Scaffold domain M1S25_02950 PF07690 Major Facilitator Superfamily M1S25_02950 PF00083 Sugar (and other) transporter M1S25_02955 PF03006 Haemolysin-III related M1S25_02980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S25_02980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S25_02980 PF00378 Enoyl-CoA hydratase/isomerase M1S25_02985 PF00108 Thiolase, N-terminal domain M1S25_02985 PF02803 Thiolase, C-terminal domain M1S25_02990 PF12833 Helix-turn-helix domain M1S25_02990 PF02311 AraC-like ligand binding domain M1S25_02995 PF02515 CoA-transferase family III M1S25_03000 PF04966 Carbohydrate-selective porin, OprB family M1S25_03005 PF01011 PQQ enzyme repeat M1S25_03010 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S25_03010 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S25_03020 PF00893 Small Multidrug Resistance protein M1S25_03030 PF02803 Thiolase, C-terminal domain M1S25_03030 PF00108 Thiolase, N-terminal domain M1S25_03040 PF13505 Outer membrane protein beta-barrel domain M1S25_03040 PF00691 OmpA family M1S25_03050 PF01139 tRNA-splicing ligase RtcB M1S25_03055 PF00324 Amino acid permease M1S25_03060 PF05175 Methyltransferase small domain M1S25_03060 PF08468 Methyltransferase small domain N-terminal M1S25_03065 PF00860 Permease family M1S25_03070 PF00009 Elongation factor Tu GTP binding domain M1S25_03070 PF00679 Elongation factor G C-terminus M1S25_03070 PF03144 Elongation factor Tu domain 2 M1S25_03075 PF01741 Large-conductance mechanosensitive channel, MscL M1S25_03090 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M1S25_03090 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M1S25_03090 PF06827 Zinc finger found in FPG and IleRS M1S25_03095 PF02245 Methylpurine-DNA glycosylase (MPG) M1S25_03115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S25_03130 PF10411 Disulfide bond isomerase protein N-terminus M1S25_03130 PF13098 Thioredoxin-like domain M1S25_03135 PF01571 Aminomethyltransferase folate-binding domain M1S25_03145 PF04343 Protein of unknown function, DUF488 M1S25_03150 PF03831 PhnA domain M1S25_03150 PF08274 PhnA Zinc-Ribbon M1S25_03155 PF07411 Domain of unknown function (DUF1508) M1S25_03160 PF04073 Aminoacyl-tRNA editing domain M1S25_03160 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S25_03160 PF03129 Anticodon binding domain M1S25_03165 PF00873 AcrB/AcrD/AcrF family M1S25_03180 PF00072 Response regulator receiver domain M1S25_03185 PF00072 Response regulator receiver domain M1S25_03190 PF01584 CheW-like domain M1S25_03195 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M1S25_03195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M1S25_03200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_03200 PF01584 CheW-like domain M1S25_03200 PF00072 Response regulator receiver domain M1S25_03200 PF01627 Hpt domain M1S25_03210 PF07687 Peptidase dimerisation domain M1S25_03210 PF01546 Peptidase family M20/M25/M40 M1S25_03215 PF08085 Entericidin EcnA/B family M1S25_03225 PF04304 Protein of unknown function (DUF454) M1S25_03230 PF03734 L,D-transpeptidase catalytic domain M1S25_03230 PF17969 L,D-transpeptidase C-terminal domain M1S25_03270 PF00175 Oxidoreductase NAD-binding domain M1S25_03270 PF00258 Flavodoxin M1S25_03270 PF00667 FAD binding domain M1S25_03280 PF12805 FUSC-like inner membrane protein yccS M1S25_03285 PF07690 Major Facilitator Superfamily M1S25_03290 PF00881 Nitroreductase family M1S25_03305 PF01235 Sodium:alanine symporter family M1S25_03310 PF01734 Patatin-like phospholipase M1S25_03315 PF00291 Pyridoxal-phosphate dependent enzyme M1S25_03315 PF13291 ACT domain M1S25_03320 PF05992 SbmA/BacA-like family M1S25_03350 PF02934 GatB/GatE catalytic domain M1S25_03350 PF02637 GatB domain M1S25_03355 PF01425 Amidase M1S25_03360 PF02686 Glu-tRNAGln amidotransferase C subunit M1S25_03370 PF04085 rod shape-determining protein MreC M1S25_03375 PF04093 rod shape-determining protein MreD M1S25_03380 PF02545 Maf-like protein M1S25_03385 PF00575 S1 RNA binding domain M1S25_03385 PF10150 Ribonuclease E/G family M1S25_03395 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain M1S25_03395 PF06974 Protein of unknown function (DUF1298) M1S25_03400 PF01507 Phosphoadenosine phosphosulfate reductase family M1S25_03415 PF02525 Flavodoxin-like fold M1S25_03435 PF02673 Bacitracin resistance protein BacA M1S25_03440 PF06719 AraC-type transcriptional regulator N-terminus M1S25_03440 PF12833 Helix-turn-helix domain M1S25_03445 PF08240 Alcohol dehydrogenase GroES-like domain M1S25_03445 PF08990 Erythronolide synthase docking M1S25_03445 PF14765 Polyketide synthase dehydratase M1S25_03445 PF00550 Phosphopantetheine attachment site M1S25_03445 PF08659 KR domain M1S25_03445 PF00698 Acyl transferase domain M1S25_03445 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S25_03445 PF16197 Ketoacyl-synthetase C-terminal extension M1S25_03445 PF09277 Erythronolide synthase, docking M1S25_03445 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S25_03450 PF01965 DJ-1/PfpI family M1S25_03460 PF00324 Amino acid permease M1S25_03465 PF04303 PrpF protein M1S25_03470 PF00348 Polyprenyl synthetase M1S25_03475 PF04237 YjbR M1S25_03480 PF01145 SPFH domain / Band 7 family M1S25_03490 PF01734 Patatin-like phospholipase M1S25_03510 PF08019 Phosphoethanolamine transferase EptA/EptB M1S25_03510 PF00884 Sulfatase M1S25_03515 PF00486 Transcriptional regulatory protein, C terminal M1S25_03515 PF00072 Response regulator receiver domain M1S25_03520 PF08521 Two-component sensor kinase N-terminal M1S25_03520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_03520 PF00512 His Kinase A (phospho-acceptor) domain M1S25_03530 PF00909 Ammonium Transporter Family M1S25_03535 PF03466 LysR substrate binding domain M1S25_03535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_03555 PF00133 tRNA synthetases class I (I, L, M and V) M1S25_03555 PF10458 Valyl tRNA synthetase tRNA binding arm M1S25_03555 PF08264 Anticodon-binding domain of tRNA M1S25_03575 PF01906 Putative heavy-metal-binding M1S25_03580 PF01906 Putative heavy-metal-binding M1S25_03585 PF02321 Outer membrane efflux protein M1S25_03590 PF00873 AcrB/AcrD/AcrF family M1S25_03595 PF00529 HlyD membrane-fusion protein of T1SS M1S25_03595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S25_03600 PF01569 PAP2 superfamily M1S25_03610 PF00348 Polyprenyl synthetase M1S25_03620 PF00829 Ribosomal prokaryotic L21 protein M1S25_03625 PF01016 Ribosomal L27 protein M1S25_03630 PF03548 Outer membrane lipoprotein carrier protein LolA M1S25_03640 PF02403 Seryl-tRNA synthetase N-terminal domain M1S25_03640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S25_03645 PF10414 Sirohaem synthase dimerisation region M1S25_03645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S25_03645 PF14824 Sirohaem biosynthesis protein central M1S25_03650 PF00588 SpoU rRNA Methylase family M1S25_03655 PF01638 HxlR-like helix-turn-helix M1S25_03660 PF03358 NADPH-dependent FMN reductase M1S25_03665 PF13520 Amino acid permease M1S25_03670 PF00465 Iron-containing alcohol dehydrogenase M1S25_03680 PF03099 Biotin/lipoate A/B protein ligase family M1S25_03685 PF04359 Protein of unknown function (DUF493) M1S25_03690 PF04546 Sigma-70, non-essential region M1S25_03690 PF03979 Sigma-70 factor, region 1.1 M1S25_03690 PF00140 Sigma-70 factor, region 1.2 M1S25_03690 PF04542 Sigma-70 region 2 M1S25_03690 PF04539 Sigma-70 region 3 M1S25_03690 PF04545 Sigma-70, region 4 M1S25_03710 PF00581 Rhodanese-like domain M1S25_03710 PF17773 UPF0176 acylphosphatase like domain M1S25_03720 PF00285 Citrate synthase, C-terminal domain M1S25_03725 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S25_03730 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S25_03735 PF02910 Fumarate reductase flavoprotein C-term M1S25_03735 PF00890 FAD binding domain M1S25_03740 PF13085 2Fe-2S iron-sulfur cluster binding domain M1S25_03755 PF16078 2-oxoglutarate dehydrogenase N-terminus M1S25_03755 PF00676 Dehydrogenase E1 component M1S25_03755 PF16870 2-oxoglutarate dehydrogenase C-terminal M1S25_03755 PF02779 Transketolase, pyrimidine binding domain M1S25_03760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S25_03760 PF00364 Biotin-requiring enzyme M1S25_03760 PF02817 e3 binding domain M1S25_03765 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_03765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S25_03770 PF00549 CoA-ligase M1S25_03770 PF08442 ATP-grasp domain M1S25_03775 PF02629 CoA binding domain M1S25_03775 PF00549 CoA-ligase M1S25_03780 PF00579 tRNA synthetases class I (W and Y) M1S25_03785 PF05661 Protein of unknown function (DUF808) M1S25_03790 PF04228 Putative neutral zinc metallopeptidase M1S25_03795 PF00999 Sodium/hydrogen exchanger family M1S25_03810 PF09587 Bacterial capsule synthesis protein PGA_cap M1S25_03820 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S25_03825 PF00582 Universal stress protein family M1S25_03830 PF00132 Bacterial transferase hexapeptide (six repeats) M1S25_03835 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S25_03835 PF03449 Transcription elongation factor, N-terminal M1S25_03840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S25_03840 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M1S25_03840 PF02142 MGS-like domain M1S25_03845 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M1S25_03845 PF00117 Glutamine amidotransferase class-I M1S25_03860 PF01985 CRS1 / YhbY (CRM) domain M1S25_03865 PF01728 FtsJ-like methyltransferase M1S25_03870 PF06480 FtsH Extracellular M1S25_03870 PF01434 Peptidase family M41 M1S25_03870 PF00004 ATPase family associated with various cellular activities (AAA) M1S25_03870 PF17862 AAA+ lid domain M1S25_03875 PF00809 Pterin binding enzyme M1S25_03895 PF09423 PhoD-like phosphatase M1S25_03895 PF16655 PhoD-like phosphatase, N-terminal domain M1S25_03910 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M1S25_03910 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M1S25_03925 PF00083 Sugar (and other) transporter M1S25_03930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1S25_03930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1S25_03935 PF01266 FAD dependent oxidoreductase M1S25_03935 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M1S25_03940 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1S25_03940 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1S25_03945 PF00781 Diacylglycerol kinase catalytic domain M1S25_03950 PF00149 Calcineurin-like phosphoesterase M1S25_03960 PF00166 Chaperonin 10 Kd subunit M1S25_03965 PF00118 TCP-1/cpn60 chaperonin family M1S25_03970 PF01219 Prokaryotic diacylglycerol kinase M1S25_03975 PF00753 Metallo-beta-lactamase superfamily M1S25_03980 PF03009 Glycerophosphoryl diester phosphodiesterase family M1S25_03985 PF00873 AcrB/AcrD/AcrF family M1S25_03995 PF01435 Peptidase family M48 M1S25_04000 PF01464 Transglycosylase SLT domain M1S25_04005 PF01171 PP-loop family M1S25_04015 PF01464 Transglycosylase SLT domain M1S25_04015 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S25_04020 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S25_04020 PF03449 Transcription elongation factor, N-terminal M1S25_04035 PF00501 AMP-binding enzyme M1S25_04035 PF13193 AMP-binding enzyme C-terminal domain M1S25_04035 PF00668 Condensation domain M1S25_04035 PF00550 Phosphopantetheine attachment site M1S25_04035 PF00975 Thioesterase domain M1S25_04065 PF00881 Nitroreductase family M1S25_04080 PF02595 Glycerate kinase family M1S25_04085 PF00384 Molybdopterin oxidoreductase M1S25_04090 PF02634 FdhD/NarQ family M1S25_04095 PF06803 Protein of unknown function (DUF1232) M1S25_04100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S25_04100 PF11890 Domain of unknown function (DUF3410) M1S25_04100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S25_04105 PF00152 tRNA synthetases class II (D, K and N) M1S25_04115 PF18073 Rubredoxin metal binding domain M1S25_04120 PF00324 Amino acid permease M1S25_04130 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M1S25_04130 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M1S25_04135 PF01678 Diaminopimelate epimerase M1S25_04140 PF01810 LysE type translocator M1S25_04145 PF02899 Phage integrase, N-terminal SAM-like domain M1S25_04145 PF00589 Phage integrase family M1S25_04150 PF01012 Electron transfer flavoprotein domain M1S25_04155 PF01012 Electron transfer flavoprotein domain M1S25_04155 PF00766 Electron transfer flavoprotein FAD-binding domain M1S25_04160 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S25_04160 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S25_04175 PF00535 Glycosyl transferase family 2 M1S25_04195 PF13533 Biotin-lipoyl like M1S25_04205 PF00266 Aminotransferase class-V M1S25_04220 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M1S25_04230 PF02687 FtsX-like permease family M1S25_04230 PF12704 MacB-like periplasmic core domain M1S25_04235 PF00005 ABC transporter M1S25_04240 PF03772 Competence protein M1S25_04240 PF13567 Domain of unknown function (DUF4131) M1S25_04240 PF00753 Metallo-beta-lactamase superfamily M1S25_04250 PF01343 Peptidase family S49 M1S25_04250 PF06965 Na+/H+ antiporter 1 M1S25_04255 PF12697 Alpha/beta hydrolase family M1S25_04260 PF00551 Formyl transferase M1S25_04265 PF00586 AIR synthase related protein, N-terminal domain M1S25_04265 PF02769 AIR synthase related protein, C-terminal domain M1S25_04270 PF01594 AI-2E family transporter M1S25_04275 PF00308 Bacterial dnaA protein M1S25_04275 PF08299 Bacterial dnaA protein helix-turn-helix M1S25_04275 PF11638 DnaA N-terminal domain M1S25_04315 PF00588 SpoU rRNA Methylase family M1S25_04315 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S25_04320 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M1S25_04330 PF00691 OmpA family M1S25_04335 PF07676 WD40-like Beta Propeller Repeat M1S25_04335 PF04052 TolB amino-terminal domain M1S25_04345 PF02472 Biopolymer transport protein ExbD/TolR M1S25_04350 PF01618 MotA/TolQ/ExbB proton channel family M1S25_04355 PF03061 Thioesterase superfamily M1S25_04360 PF07687 Peptidase dimerisation domain M1S25_04360 PF01546 Peptidase family M20/M25/M40 M1S25_04365 PF17864 RuvB AAA lid domain M1S25_04365 PF05491 RuvB C-terminal winged helix domain M1S25_04365 PF05496 Holliday junction DNA helicase RuvB P-loop domain M1S25_04370 PF01330 RuvA N terminal domain M1S25_04370 PF07499 RuvA, C-terminal domain M1S25_04375 PF01966 HD domain M1S25_04380 PF02769 AIR synthase related protein, C-terminal domain M1S25_04380 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M1S25_04380 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M1S25_04385 PF07690 Major Facilitator Superfamily M1S25_04390 PF01784 NIF3 (NGG1p interacting factor 3) M1S25_04395 PF00378 Enoyl-CoA hydratase/isomerase M1S25_04400 PF01467 Cytidylyltransferase-like M1S25_04400 PF00293 NUDIX domain M1S25_04410 PF00578 AhpC/TSA family M1S25_04425 PF06508 Queuosine biosynthesis protein QueC M1S25_04435 PF00132 Bacterial transferase hexapeptide (six repeats) M1S25_04435 PF14602 Hexapeptide repeat of succinyl-transferase M1S25_04435 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M1S25_04445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_04445 PF03466 LysR substrate binding domain M1S25_04450 PF00005 ABC transporter M1S25_04450 PF12857 TOBE-like domain M1S25_04455 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_04460 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_04475 PF01063 Amino-transferase class IV M1S25_04480 PF02618 YceG-like family M1S25_04485 PF02223 Thymidylate kinase M1S25_04495 PF00890 FAD binding domain M1S25_04495 PF02910 Fumarate reductase flavoprotein C-term M1S25_04500 PF13180 PDZ domain M1S25_04510 PF00679 Elongation factor G C-terminus M1S25_04510 PF00009 Elongation factor Tu GTP binding domain M1S25_04510 PF03144 Elongation factor Tu domain 2 M1S25_04510 PF06421 GTP-binding protein LepA C-terminus M1S25_04515 PF10502 Signal peptidase, peptidase S26 M1S25_04525 PF00035 Double-stranded RNA binding motif M1S25_04525 PF14622 Ribonuclease-III-like M1S25_04530 PF07650 KH domain M1S25_04530 PF01926 50S ribosome-binding GTPase M1S25_04540 PF02565 Recombination protein O C terminal M1S25_04540 PF11967 Recombination protein O N terminal M1S25_04545 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M1S25_04550 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M1S25_04555 PF00106 short chain dehydrogenase M1S25_04585 PF00155 Aminotransferase class I and II M1S25_04595 PF00990 Diguanylate cyclase, GGDEF domain M1S25_04595 PF17151 Periplasmic sensor domain M1S25_04605 PF00271 Helicase conserved C-terminal domain M1S25_04605 PF17757 UvrB interaction domain M1S25_04605 PF02151 UvrB/uvrC motif M1S25_04605 PF04851 Type III restriction enzyme, res subunit M1S25_04605 PF12344 Ultra-violet resistance protein B M1S25_04615 PF00892 EamA-like transporter family M1S25_04620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S25_04620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S25_04635 PF01926 50S ribosome-binding GTPase M1S25_04635 PF01018 GTP1/OBG M1S25_04640 PF01472 PUA domain M1S25_04640 PF00696 Amino acid kinase family M1S25_04650 PF07759 Protein of unknown function (DUF1615) M1S25_04655 PF01207 Dihydrouridine synthase (Dus) M1S25_04660 PF03060 Nitronate monooxygenase M1S25_04675 PF02350 UDP-N-acetylglucosamine 2-epimerase M1S25_04705 PF03441 FAD binding domain of DNA photolyase M1S25_04705 PF00875 DNA photolyase M1S25_04710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S25_04715 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_04720 PF07943 Penicillin-binding protein 5, C-terminal domain M1S25_04720 PF00768 D-alanyl-D-alanine carboxypeptidase M1S25_04730 PF03971 Monomeric isocitrate dehydrogenase M1S25_04735 PF00849 RNA pseudouridylate synthase M1S25_04740 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S25_04760 PF06779 Uncharacterised MFS-type transporter YbfB M1S25_04765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_04765 PF03466 LysR substrate binding domain M1S25_04770 PF00375 Sodium:dicarboxylate symporter family M1S25_04775 PF02567 Phenazine biosynthesis-like protein M1S25_04780 PF05193 Peptidase M16 inactive domain M1S25_04780 PF00675 Insulinase (Peptidase family M16) M1S25_04805 PF02581 Thiamine monophosphate synthase M1S25_04810 PF00202 Aminotransferase class-III M1S25_04820 PF00849 RNA pseudouridylate synthase M1S25_04825 PF12137 RNA polymerase recycling family C-terminal M1S25_04825 PF00176 SNF2 family N-terminal domain M1S25_04825 PF18339 RapA N-terminal Tudor like domain 1 M1S25_04825 PF00271 Helicase conserved C-terminal domain M1S25_04825 PF18337 RapA N-terminal Tudor like domain M1S25_04835 PF00440 Bacterial regulatory proteins, tetR family M1S25_04840 PF00970 Oxidoreductase FAD-binding domain M1S25_04840 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S25_04840 PF00175 Oxidoreductase NAD-binding domain M1S25_04845 PF00487 Fatty acid desaturase M1S25_04855 PF17754 MftR C-terminal domain M1S25_04855 PF00440 Bacterial regulatory proteins, tetR family M1S25_04865 PF00202 Aminotransferase class-III M1S25_04870 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S25_04875 PF00171 Aldehyde dehydrogenase family M1S25_04885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S25_04885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S25_04885 PF00205 Thiamine pyrophosphate enzyme, central domain M1S25_04890 PF00324 Amino acid permease M1S25_04895 PF12849 PBP superfamily domain M1S25_04900 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_04905 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_04910 PF00005 ABC transporter M1S25_04915 PF01343 Peptidase family S49 M1S25_04915 PF08496 Peptidase family S49 N-terminal M1S25_04930 PF00206 Lyase M1S25_04930 PF08328 Adenylosuccinate lyase C-terminal M1S25_04935 PF04356 Protein of unknown function (DUF489) M1S25_04945 PF13344 Haloacid dehalogenase-like hydrolase M1S25_04945 PF00293 NUDIX domain M1S25_04950 PF00132 Bacterial transferase hexapeptide (six repeats) M1S25_04955 PF00768 D-alanyl-D-alanine carboxypeptidase M1S25_04955 PF07943 Penicillin-binding protein 5, C-terminal domain M1S25_04970 PF01975 Survival protein SurE M1S25_04975 PF01551 Peptidase family M23 M1S25_04975 PF01476 LysM domain M1S25_04980 PF03466 LysR substrate binding domain M1S25_04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_04985 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S25_04985 PF13654 AAA domain M1S25_04990 PF07690 Major Facilitator Superfamily M1S25_04995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S25_05000 PF13593 SBF-like CPA transporter family (DUF4137) M1S25_05005 PF01197 Ribosomal protein L31 M1S25_05020 PF04055 Radical SAM superfamily M1S25_05025 PF01132 Elongation factor P (EF-P) OB domain M1S25_05025 PF08207 Elongation factor P (EF-P) KOW-like domain M1S25_05025 PF09285 Elongation factor P, C-terminal M1S25_05030 PF13722 5TM C-terminal transporter carbon starvation CstA M1S25_05030 PF02554 Carbon starvation protein CstA M1S25_05035 PF04328 Selenoprotein, putative M1S25_05070 PF13556 PucR C-terminal helix-turn-helix domain M1S25_05070 PF06018 CodY GAF-like domain M1S25_05070 PF17853 GGDEF-like domain M1S25_05085 PF00171 Aldehyde dehydrogenase family M1S25_05090 PF00324 Amino acid permease M1S25_05095 PF03466 LysR substrate binding domain M1S25_05095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_05100 PF02028 BCCT, betaine/carnitine/choline family transporter M1S25_05105 PF02028 BCCT, betaine/carnitine/choline family transporter M1S25_05110 PF00355 Rieske [2Fe-2S] domain M1S25_05110 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S25_05115 PF00171 Aldehyde dehydrogenase family M1S25_05125 PF18113 Rubredoxin binding C-terminal domain M1S25_05125 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_05130 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S25_05130 PF01266 FAD dependent oxidoreductase M1S25_05150 PF00892 EamA-like transporter family M1S25_05160 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M1S25_05165 PF00083 Sugar (and other) transporter M1S25_05170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S25_05170 PF13378 Enolase C-terminal domain-like M1S25_05175 PF08990 Erythronolide synthase docking M1S25_05175 PF14765 Polyketide synthase dehydratase M1S25_05175 PF00550 Phosphopantetheine attachment site M1S25_05175 PF08659 KR domain M1S25_05175 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S25_05175 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S25_05175 PF16197 Ketoacyl-synthetase C-terminal extension M1S25_05175 PF09277 Erythronolide synthase, docking M1S25_05175 PF08240 Alcohol dehydrogenase GroES-like domain M1S25_05175 PF00698 Acyl transferase domain M1S25_05180 PF00440 Bacterial regulatory proteins, tetR family M1S25_05200 PF17954 Quercetinase C-terminal cupin domain M1S25_05200 PF02678 Pirin M1S25_05210 PF13309 HTH domain M1S25_05210 PF08348 YheO-like PAS domain M1S25_05220 PF13193 AMP-binding enzyme C-terminal domain M1S25_05220 PF00501 AMP-binding enzyme M1S25_05220 PF00550 Phosphopantetheine attachment site M1S25_05220 PF00668 Condensation domain M1S25_05225 PF13193 AMP-binding enzyme C-terminal domain M1S25_05225 PF00501 AMP-binding enzyme M1S25_05225 PF00550 Phosphopantetheine attachment site M1S25_05225 PF00975 Thioesterase domain M1S25_05225 PF00668 Condensation domain M1S25_05230 PF01032 FecCD transport family M1S25_05235 PF01032 FecCD transport family M1S25_05240 PF00005 ABC transporter M1S25_05245 PF01497 Periplasmic binding protein M1S25_05250 PF00593 TonB dependent receptor M1S25_05250 PF07715 TonB-dependent Receptor Plug Domain M1S25_05255 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S25_05260 PF00501 AMP-binding enzyme M1S25_05260 PF00668 Condensation domain M1S25_05260 PF00550 Phosphopantetheine attachment site M1S25_05265 PF00501 AMP-binding enzyme M1S25_05265 PF13193 AMP-binding enzyme C-terminal domain M1S25_05270 PF00550 Phosphopantetheine attachment site M1S25_05270 PF00857 Isochorismatase family M1S25_05275 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S25_05285 PF00005 ABC transporter M1S25_05290 PF00005 ABC transporter M1S25_05295 PF00975 Thioesterase domain M1S25_05305 PF00425 chorismate binding enzyme M1S25_05315 PF01208 Uroporphyrinogen decarboxylase (URO-D) M1S25_05320 PF05675 Protein of unknown function (DUF817) M1S25_05335 PF00144 Beta-lactamase M1S25_05345 PF01227 GTP cyclohydrolase I M1S25_05350 PF01799 [2Fe-2S] binding domain M1S25_05350 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S25_05355 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M1S25_05355 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M1S25_05370 PF00218 Indole-3-glycerol phosphate synthase M1S25_05375 PF02885 Glycosyl transferase family, helical bundle domain M1S25_05375 PF00591 Glycosyl transferase family, a/b domain M1S25_05380 PF07715 TonB-dependent Receptor Plug Domain M1S25_05380 PF00593 TonB dependent receptor M1S25_05385 PF11838 ERAP1-like C-terminal domain M1S25_05385 PF01433 Peptidase family M1 domain M1S25_05390 PF00117 Glutamine amidotransferase class-I M1S25_05400 PF00854 POT family M1S25_05405 PF00120 Glutamine synthetase, catalytic domain M1S25_05405 PF03951 Glutamine synthetase, beta-Grasp domain M1S25_05410 PF04345 Chorismate lyase M1S25_05415 PF01040 UbiA prenyltransferase family M1S25_05450 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M1S25_05450 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M1S25_05455 PF01784 NIF3 (NGG1p interacting factor 3) M1S25_05460 PF13180 PDZ domain M1S25_05465 PF01743 Poly A polymerase head domain M1S25_05465 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S25_05470 PF00390 Malic enzyme, N-terminal domain M1S25_05470 PF03949 Malic enzyme, NAD binding domain M1S25_05470 PF01515 Phosphate acetyl/butaryl transferase M1S25_05475 PF00563 EAL domain M1S25_05475 PF00990 Diguanylate cyclase, GGDEF domain M1S25_05475 PF03707 Bacterial signalling protein N terminal repeat M1S25_05480 PF04452 RNA methyltransferase M1S25_05485 PF02219 Methylenetetrahydrofolate reductase M1S25_05490 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M1S25_05490 PF05221 S-adenosyl-L-homocysteine hydrolase M1S25_05505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_05505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_05505 PF09317 Domain of unknown function (DUF1974) M1S25_05510 PF04055 Radical SAM superfamily M1S25_05515 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_05515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S25_05525 PF07690 Major Facilitator Superfamily M1S25_05535 PF00557 Metallopeptidase family M24 M1S25_05540 PF00318 Ribosomal protein S2 M1S25_05545 PF00889 Elongation factor TS M1S25_05555 PF12833 Helix-turn-helix domain M1S25_05575 PF05036 Sporulation related domain M1S25_05575 PF03330 Lytic transglycolase M1S25_05580 PF13406 Transglycosylase SLT domain M1S25_05585 PF01098 Cell cycle protein M1S25_05595 PF14489 QueF-like protein M1S25_05595 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M1S25_05600 PF01061 ABC-2 type transporter M1S25_05605 PF00005 ABC transporter M1S25_05635 PF00464 Serine hydroxymethyltransferase M1S25_05640 PF02321 Outer membrane efflux protein M1S25_05645 PF00873 AcrB/AcrD/AcrF family M1S25_05650 PF13533 Biotin-lipoyl like M1S25_05655 PF03466 LysR substrate binding domain M1S25_05655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_05660 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S25_05665 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_05670 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_05675 PF00005 ABC transporter M1S25_05680 PF00893 Small Multidrug Resistance protein M1S25_05685 PF00037 4Fe-4S binding domain M1S25_05690 PF01136 Peptidase family U32 M1S25_05690 PF16325 Peptidase family U32 C-terminal domain M1S25_05695 PF00155 Aminotransferase class I and II M1S25_05695 PF00392 Bacterial regulatory proteins, gntR family M1S25_05700 PF02567 Phenazine biosynthesis-like protein M1S25_05705 PF00970 Oxidoreductase FAD-binding domain M1S25_05705 PF00175 Oxidoreductase NAD-binding domain M1S25_05710 PF18389 TrmO C-terminal domain M1S25_05710 PF01980 tRNA-methyltransferase O M1S25_05720 PF00437 Type II/IV secretion system protein M1S25_05720 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S25_05730 PF00072 Response regulator receiver domain M1S25_05730 PF00486 Transcriptional regulatory protein, C terminal M1S25_05735 PF08521 Two-component sensor kinase N-terminal M1S25_05735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_05735 PF00512 His Kinase A (phospho-acceptor) domain M1S25_05745 PF00293 NUDIX domain M1S25_05755 PF14814 Bifunctional transglycosylase second domain M1S25_05755 PF00912 Transglycosylase M1S25_05755 PF00905 Penicillin binding protein transpeptidase domain M1S25_05760 PF01513 ATP-NAD kinase M1S25_05765 PF07023 Protein of unknown function (DUF1315) M1S25_05770 PF00591 Glycosyl transferase family, a/b domain M1S25_05770 PF02885 Glycosyl transferase family, helical bundle domain M1S25_05775 PF00375 Sodium:dicarboxylate symporter family M1S25_05780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_05780 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_05780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_05785 PF00756 Putative esterase M1S25_05790 PF01817 Chorismate mutase type II M1S25_05790 PF01842 ACT domain M1S25_05790 PF00800 Prephenate dehydratase M1S25_05795 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S25_05805 PF07687 Peptidase dimerisation domain M1S25_05805 PF01546 Peptidase family M20/M25/M40 M1S25_05810 PF12706 Beta-lactamase superfamily domain M1S25_05820 PF03883 Peroxide stress protein YaaA M1S25_05830 PF05690 Thiazole biosynthesis protein ThiG M1S25_05840 PF04241 Protein of unknown function (DUF423) M1S25_05845 PF00140 Sigma-70 factor, region 1.2 M1S25_05845 PF04542 Sigma-70 region 2 M1S25_05845 PF04545 Sigma-70, region 4 M1S25_05860 PF00313 'Cold-shock' DNA-binding domain M1S25_05865 PF00271 Helicase conserved C-terminal domain M1S25_05865 PF00270 DEAD/DEAH box helicase M1S25_05875 PF00881 Nitroreductase family M1S25_05880 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M1S25_05880 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M1S25_05890 PF00589 Phage integrase family M1S25_05985 PF01555 DNA methylase M1S25_06220 PF01180 Dihydroorotate dehydrogenase M1S25_06225 PF02674 Colicin V production protein M1S25_06230 PF00156 Phosphoribosyl transferase domain M1S25_06245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S25_06245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S25_06250 PF01435 Peptidase family M48 M1S25_06255 PF09424 Yqey-like protein M1S25_06260 PF01165 Ribosomal protein S21 M1S25_06265 PF00814 Glycoprotease family M1S25_06285 PF00069 Protein kinase domain M1S25_06310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_06310 PF03466 LysR substrate binding domain M1S25_06315 PF00202 Aminotransferase class-III M1S25_06320 PF00171 Aldehyde dehydrogenase family M1S25_06325 PF00324 Amino acid permease M1S25_06355 PF04076 Bacterial OB fold (BOF) protein M1S25_06380 PF00561 alpha/beta hydrolase fold M1S25_06385 PF03616 Sodium/glutamate symporter M1S25_06395 PF07729 FCD domain M1S25_06395 PF00392 Bacterial regulatory proteins, gntR family M1S25_06445 PF08946 Osmosensory transporter coiled coil M1S25_06445 PF00083 Sugar (and other) transporter M1S25_06470 PF00155 Aminotransferase class I and II M1S25_06475 PF06826 Predicted Permease Membrane Region M1S25_06475 PF02080 TrkA-C domain M1S25_06485 PF04403 Paraquat-inducible protein A M1S25_06490 PF02470 MlaD protein M1S25_06500 PF01177 Asp/Glu/Hydantoin racemase M1S25_06505 PF00892 EamA-like transporter family M1S25_06510 PF07995 Glucose / Sorbosone dehydrogenase M1S25_06520 PF13610 DDE domain M1S25_06530 PF01636 Phosphotransferase enzyme family M1S25_06535 PF13610 DDE domain M1S25_06550 PF00132 Bacterial transferase hexapeptide (six repeats) M1S25_06560 PF00893 Small Multidrug Resistance protein M1S25_06565 PF00809 Pterin binding enzyme M1S25_06580 PF07091 Ribosomal RNA methyltransferase (FmrO) M1S25_06595 PF12848 ABC transporter M1S25_06595 PF00005 ABC transporter M1S25_06600 PF01636 Phosphotransferase enzyme family M1S25_06610 PF03050 Transposase IS66 family M1S25_06610 PF13005 zinc-finger binding domain of transposase IS66 M1S25_06610 PF13007 Transposase C of IS166 homeodomain M1S25_06610 PF13817 IS66 C-terminal element M1S25_06635 PF13610 DDE domain M1S25_06650 PF00375 Sodium:dicarboxylate symporter family M1S25_06660 PF16123 Hydroxyacylglutathione hydrolase C-terminus M1S25_06660 PF00753 Metallo-beta-lactamase superfamily M1S25_06665 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_06670 PF09383 NIL domain M1S25_06670 PF00005 ABC transporter M1S25_06675 PF03180 NLPA lipoprotein M1S25_06680 PF02844 Phosphoribosylglycinamide synthetase, N domain M1S25_06680 PF02843 Phosphoribosylglycinamide synthetase, C domain M1S25_06680 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M1S25_06685 PF02142 MGS-like domain M1S25_06685 PF01808 AICARFT/IMPCHase bienzyme M1S25_06690 PF02954 Bacterial regulatory protein, Fis family M1S25_06710 PF01134 Glucose inhibited division protein A M1S25_06710 PF13932 GidA associated domain M1S25_06720 PF14403 Circularly permuted ATP-grasp type 2 M1S25_06730 PF01841 Transglutaminase-like superfamily M1S25_06730 PF08379 Bacterial transglutaminase-like N-terminal region M1S25_06740 PF00842 Alanine racemase, C-terminal domain M1S25_06740 PF01168 Alanine racemase, N-terminal domain M1S25_06745 PF03796 DnaB-like helicase C terminal domain M1S25_06745 PF00772 DnaB-like helicase N terminal domain M1S25_06750 PF01281 Ribosomal protein L9, N-terminal domain M1S25_06750 PF03948 Ribosomal protein L9, C-terminal domain M1S25_06755 PF01084 Ribosomal protein S18 M1S25_06760 PF01250 Ribosomal protein S6 M1S25_06765 PF01040 UbiA prenyltransferase family M1S25_06770 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M1S25_06775 PF00510 Cytochrome c oxidase subunit III M1S25_06780 PF00115 Cytochrome C and Quinol oxidase polypeptide I M1S25_06785 PF06481 COX Aromatic Rich Motif M1S25_06785 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M1S25_06795 PF00391 PEP-utilising enzyme, mobile domain M1S25_06795 PF02896 PEP-utilising enzyme, TIM barrel domain M1S25_06795 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M1S25_06800 PF03618 Kinase/pyrophosphorylase M1S25_06810 PF01522 Polysaccharide deacetylase M1S25_06810 PF14883 Hypothetical glycosyl hydrolase family 13 M1S25_06815 PF00535 Glycosyl transferase family 2 M1S25_06820 PF13994 PgaD-like protein M1S25_06830 PF00296 Luciferase-like monooxygenase M1S25_06845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_06845 PF03466 LysR substrate binding domain M1S25_06855 PF00472 RF-1 domain M1S25_06855 PF03462 PCRF domain M1S25_06860 PF17827 PrmC N-terminal domain M1S25_06860 PF13847 Methyltransferase domain M1S25_06865 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_06870 PF09084 NMT1/THI5 like M1S25_06875 PF12833 Helix-turn-helix domain M1S25_06880 PF00106 short chain dehydrogenase M1S25_06885 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_06885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_06885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_06890 PF13193 AMP-binding enzyme C-terminal domain M1S25_06890 PF00501 AMP-binding enzyme M1S25_06895 PF01613 Flavin reductase like domain M1S25_06900 PF00899 ThiF family M1S25_06905 PF03109 ABC1 family M1S25_06920 PF03814 Potassium-transporting ATPase A subunit M1S25_06930 PF02669 K+-transporting ATPase, c chain M1S25_06935 PF02702 Osmosensitive K+ channel His kinase sensor domain M1S25_06935 PF00512 His Kinase A (phospho-acceptor) domain M1S25_06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_06935 PF13493 Domain of unknown function (DUF4118) M1S25_06940 PF00486 Transcriptional regulatory protein, C terminal M1S25_06940 PF00072 Response regulator receiver domain M1S25_06945 PF00120 Glutamine synthetase, catalytic domain M1S25_06955 PF03232 Ubiquinone biosynthesis protein COQ7 M1S25_06960 PF07690 Major Facilitator Superfamily M1S25_06965 PF01103 Surface antigen M1S25_06965 PF07244 Surface antigen variable number repeat M1S25_06965 PF17243 POTRA domain TamA domain 1 M1S25_06980 PF00330 Aconitase family (aconitate hydratase) M1S25_06980 PF06434 Aconitate hydratase 2 N-terminus M1S25_06980 PF11791 Aconitate B N-terminal domain M1S25_06990 PF00027 Cyclic nucleotide-binding domain M1S25_06990 PF00520 Ion transport protein M1S25_06995 PF07690 Major Facilitator Superfamily M1S25_07010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_07010 PF03466 LysR substrate binding domain M1S25_07015 PF04284 Protein of unknown function (DUF441) M1S25_07025 PF01479 S4 domain M1S25_07025 PF00849 RNA pseudouridylate synthase M1S25_07040 PF01479 S4 domain M1S25_07040 PF00849 RNA pseudouridylate synthase M1S25_07045 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M1S25_07050 PF08676 MutL C terminal dimerisation domain M1S25_07050 PF01119 DNA mismatch repair protein, C-terminal domain M1S25_07060 PF17209 Hfq protein M1S25_07070 PF00881 Nitroreductase family M1S25_07080 PF00149 Calcineurin-like phosphoesterase M1S25_07085 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S25_07090 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M1S25_07090 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S25_07095 PF00958 GMP synthase C terminal domain M1S25_07095 PF02540 NAD synthase M1S25_07095 PF00117 Glutamine amidotransferase class-I M1S25_07100 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M1S25_07105 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M1S25_07110 PF13520 Amino acid permease M1S25_07115 PF00171 Aldehyde dehydrogenase family M1S25_07130 PF00465 Iron-containing alcohol dehydrogenase M1S25_07135 PF05970 PIF1-like helicase M1S25_07135 PF14493 Helix-turn-helix domain M1S25_07145 PF06445 GyrI-like small molecule binding domain M1S25_07150 PF02110 Hydroxyethylthiazole kinase family M1S25_07165 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M1S25_07165 PF11940 Domain of unknown function (DUF3458) Ig-like fold M1S25_07165 PF01433 Peptidase family M1 domain M1S25_07175 PF00106 short chain dehydrogenase M1S25_07185 PF01817 Chorismate mutase type II M1S25_07190 PF01037 Lrp/AsnC ligand binding domain M1S25_07205 PF00440 Bacterial regulatory proteins, tetR family M1S25_07210 PF07715 TonB-dependent Receptor Plug Domain M1S25_07210 PF00593 TonB dependent receptor M1S25_07215 PF00924 Mechanosensitive ion channel M1S25_07250 PF00593 TonB dependent receptor M1S25_07250 PF07715 TonB-dependent Receptor Plug Domain M1S25_07270 PF12848 ABC transporter M1S25_07270 PF00005 ABC transporter M1S25_07275 PF00582 Universal stress protein family M1S25_07300 PF00690 Cation transporter/ATPase, N-terminus M1S25_07300 PF00689 Cation transporting ATPase, C-terminus M1S25_07305 PF02308 MgtC family M1S25_07310 PF03594 Benzoate membrane transport protein M1S25_07315 PF01037 Lrp/AsnC ligand binding domain M1S25_07320 PF01810 LysE type translocator M1S25_07325 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1S25_07330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_07330 PF03466 LysR substrate binding domain M1S25_07340 PF00108 Thiolase, N-terminal domain M1S25_07340 PF02803 Thiolase, C-terminal domain M1S25_07350 PF01575 MaoC like domain M1S25_07355 PF00144 Beta-lactamase M1S25_07365 PF07690 Major Facilitator Superfamily M1S25_07370 PF12170 DNA polymerase III tau subunit V interacting with alpha M1S25_07370 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M1S25_07370 PF12169 DNA polymerase III subunits gamma and tau domain III M1S25_07375 PF04185 Phosphoesterase family M1S25_07375 PF05506 Domain of unknown function (DUF756) M1S25_07380 PF03061 Thioesterase superfamily M1S25_07385 PF00465 Iron-containing alcohol dehydrogenase M1S25_07395 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S25_07400 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M1S25_07400 PF01565 FAD binding domain M1S25_07415 PF01645 Conserved region in glutamate synthase M1S25_07515 PF01555 DNA methylase M1S25_07695 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system M1S25_07785 PF12832 MFS_1 like family M1S25_07795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S25_07795 PF00289 Biotin carboxylase, N-terminal domain M1S25_07795 PF02785 Biotin carboxylase C-terminal domain M1S25_07800 PF00364 Biotin-requiring enzyme M1S25_07805 PF01220 Dehydroquinase class II M1S25_07810 PF00817 impB/mucB/samB family M1S25_07810 PF11799 impB/mucB/samB family C-terminal domain M1S25_07810 PF13438 Domain of unknown function (DUF4113) M1S25_07820 PF00005 ABC transporter M1S25_07825 PF00072 Response regulator receiver domain M1S25_07825 PF00486 Transcriptional regulatory protein, C terminal M1S25_07835 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S25_07835 PF13806 Rieske-like [2Fe-2S] domain M1S25_07835 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_07835 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S25_07835 PF04324 BFD-like [2Fe-2S] binding domain M1S25_07835 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S25_07840 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_07840 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S25_07840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S25_07840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S25_07840 PF04324 BFD-like [2Fe-2S] binding domain M1S25_07845 PF00384 Molybdopterin oxidoreductase M1S25_07845 PF01568 Molydopterin dinucleotide binding domain M1S25_07845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S25_07845 PF04324 BFD-like [2Fe-2S] binding domain M1S25_07850 PF12804 MobA-like NTP transferase domain M1S25_07855 PF00384 Molybdopterin oxidoreductase M1S25_07855 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S25_07855 PF01568 Molydopterin dinucleotide binding domain M1S25_07860 PF06463 Molybdenum Cofactor Synthesis C M1S25_07860 PF04055 Radical SAM superfamily M1S25_07870 PF02391 MoaE protein M1S25_07875 PF00994 Probable molybdopterin binding domain M1S25_07875 PF01967 MoaC family M1S25_07880 PF00994 Probable molybdopterin binding domain M1S25_07880 PF03454 MoeA C-terminal region (domain IV) M1S25_07880 PF03453 MoeA N-terminal region (domain I and II) M1S25_07885 PF01638 HxlR-like helix-turn-helix M1S25_07890 PF00155 Aminotransferase class I and II M1S25_07890 PF00392 Bacterial regulatory proteins, gntR family M1S25_07895 PF00892 EamA-like transporter family M1S25_07915 PF02635 DsrE/DsrF-like family M1S25_07920 PF16363 GDP-mannose 4,6 dehydratase M1S25_07925 PF10415 Fumarase C C-terminus M1S25_07925 PF00206 Lyase M1S25_07945 PF01266 FAD dependent oxidoreductase M1S25_07955 PF02542 YgbB family M1S25_07965 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S25_07965 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S25_07985 PF02954 Bacterial regulatory protein, Fis family M1S25_07985 PF00158 Sigma-54 interaction domain M1S25_07985 PF00072 Response regulator receiver domain M1S25_07990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_07990 PF00512 His Kinase A (phospho-acceptor) domain M1S25_07990 PF00989 PAS fold M1S25_07995 PF00919 Uncharacterized protein family UPF0004 M1S25_07995 PF04055 Radical SAM superfamily M1S25_07995 PF18693 TRAM domain M1S25_08000 PF00696 Amino acid kinase family M1S25_08005 PF01765 Ribosome recycling factor M1S25_08010 PF01255 Putative undecaprenyl diphosphate synthase M1S25_08020 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M1S25_08020 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M1S25_08020 PF13288 DXP reductoisomerase C-terminal domain M1S25_08025 PF02163 Peptidase family M50 M1S25_08025 PF17820 PDZ domain M1S25_08025 PF13180 PDZ domain M1S25_08030 PF07244 Surface antigen variable number repeat M1S25_08030 PF01103 Surface antigen M1S25_08040 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M1S25_08040 PF00132 Bacterial transferase hexapeptide (six repeats) M1S25_08045 PF07977 FabA-like domain M1S25_08050 PF00132 Bacterial transferase hexapeptide (six repeats) M1S25_08050 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M1S25_08065 PF02631 RecX family M1S25_08070 PF00154 recA bacterial DNA recombination protein M1S25_08075 PF01479 S4 domain M1S25_08080 PF13419 Haloacid dehalogenase-like hydrolase M1S25_08105 PF01037 Lrp/AsnC ligand binding domain M1S25_08110 PF00266 Aminotransferase class-V M1S25_08115 PF00324 Amino acid permease M1S25_08130 PF05922 Peptidase inhibitor I9 M1S25_08130 PF00082 Subtilase family M1S25_08135 PF01740 STAS domain M1S25_08135 PF00916 Sulfate permease family M1S25_08140 PF02586 SOS response associated peptidase (SRAP) M1S25_08145 PF07995 Glucose / Sorbosone dehydrogenase M1S25_08155 PF00990 Diguanylate cyclase, GGDEF domain M1S25_08155 PF03707 Bacterial signalling protein N terminal repeat M1S25_08155 PF00563 EAL domain M1S25_08175 PF02378 Phosphotransferase system, EIIC M1S25_08175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M1S25_08180 PF00294 pfkB family carbohydrate kinase M1S25_08185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M1S25_08185 PF00381 PTS HPr component phosphorylation site M1S25_08185 PF02896 PEP-utilising enzyme, TIM barrel domain M1S25_08185 PF00391 PEP-utilising enzyme, mobile domain M1S25_08185 PF05524 PEP-utilising enzyme, N-terminal M1S25_08210 PF05525 Branched-chain amino acid transport protein M1S25_08215 PF00557 Metallopeptidase family M24 M1S25_08220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_08220 PF03466 LysR substrate binding domain M1S25_08230 PF00462 Glutaredoxin M1S25_08235 PF00202 Aminotransferase class-III M1S25_08240 PF00571 CBS domain M1S25_08240 PF00478 IMP dehydrogenase / GMP reductase domain M1S25_08265 PF02881 SRP54-type protein, helical bundle domain M1S25_08265 PF00448 SRP54-type protein, GTPase domain M1S25_08275 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M1S25_08290 PF08173 Membrane bound YbgT-like protein M1S25_08295 PF02322 Cytochrome bd terminal oxidase subunit II M1S25_08300 PF01654 Cytochrome bd terminal oxidase subunit I M1S25_08310 PF07290 Protein of unknown function (DUF1449) M1S25_08320 PF00294 pfkB family carbohydrate kinase M1S25_08325 PF00593 TonB dependent receptor M1S25_08325 PF07715 TonB-dependent Receptor Plug Domain M1S25_08330 PF05193 Peptidase M16 inactive domain M1S25_08330 PF08367 Peptidase M16C associated M1S25_08330 PF00675 Insulinase (Peptidase family M16) M1S25_08335 PF02253 Phospholipase A1 M1S25_08340 PF02386 Cation transport protein M1S25_08345 PF02080 TrkA-C domain M1S25_08345 PF02254 TrkA-N domain M1S25_08350 PF00585 C-terminal regulatory domain of Threonine dehydratase M1S25_08350 PF00291 Pyridoxal-phosphate dependent enzyme M1S25_08355 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M1S25_08370 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S25_08370 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S25_08380 PF02617 ATP-dependent Clp protease adaptor protein ClpS M1S25_08385 PF10431 C-terminal, D2-small domain, of ClpB protein M1S25_08385 PF02861 Clp amino terminal domain, pathogenicity island component M1S25_08385 PF00004 ATPase family associated with various cellular activities (AAA) M1S25_08385 PF17871 AAA lid domain M1S25_08385 PF07724 AAA domain (Cdc48 subfamily) M1S25_08390 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M1S25_08395 PF00793 DAHP synthetase I family M1S25_08410 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_08410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S25_08440 PF06418 CTP synthase N-terminus M1S25_08440 PF00117 Glutamine amidotransferase class-I M1S25_08445 PF00793 DAHP synthetase I family M1S25_08450 PF03952 Enolase, N-terminal domain M1S25_08450 PF00113 Enolase, C-terminal TIM barrel domain M1S25_08455 PF04239 Protein of unknown function (DUF421) M1S25_08460 PF04977 Septum formation initiator M1S25_08465 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M1S25_08470 PF01144 Coenzyme A transferase M1S25_08475 PF01144 Coenzyme A transferase M1S25_08480 PF00108 Thiolase, N-terminal domain M1S25_08480 PF02803 Thiolase, C-terminal domain M1S25_08485 PF10397 Adenylosuccinate lyase C-terminus M1S25_08485 PF00206 Lyase M1S25_08490 PF00561 alpha/beta hydrolase fold M1S25_08495 PF07690 Major Facilitator Superfamily M1S25_08500 PF02627 Carboxymuconolactone decarboxylase family M1S25_08505 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M1S25_08505 PF00775 Dioxygenase M1S25_08510 PF00775 Dioxygenase M1S25_08515 PF01487 Type I 3-dehydroquinase M1S25_08520 PF05048 Periplasmic copper-binding protein (NosD) M1S25_08525 PF04966 Carbohydrate-selective porin, OprB family M1S25_08530 PF01011 PQQ enzyme repeat M1S25_08530 PF13360 PQQ-like domain M1S25_08540 PF04143 Sulphur transport M1S25_08550 PF00753 Metallo-beta-lactamase superfamily M1S25_08555 PF09339 IclR helix-turn-helix domain M1S25_08555 PF01614 Bacterial transcriptional regulator M1S25_08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_08560 PF03466 LysR substrate binding domain M1S25_08565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_08565 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_08565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_08580 PF00106 short chain dehydrogenase M1S25_08590 PF07690 Major Facilitator Superfamily M1S25_08600 PF01425 Amidase M1S25_08605 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S25_08620 PF00355 Rieske [2Fe-2S] domain M1S25_08620 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S25_08635 PF00175 Oxidoreductase NAD-binding domain M1S25_08635 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S25_08640 PF01613 Flavin reductase like domain M1S25_08645 PF02311 AraC-like ligand binding domain M1S25_08645 PF12833 Helix-turn-helix domain M1S25_08650 PF01179 Copper amine oxidase, enzyme domain M1S25_08650 PF07833 Copper amine oxidase N-terminal domain M1S25_08650 PF02727 Copper amine oxidase, N2 domain M1S25_08650 PF02728 Copper amine oxidase, N3 domain M1S25_08660 PF00171 Aldehyde dehydrogenase family M1S25_08665 PF01804 Penicillin amidase M1S25_08670 PF12146 Serine aminopeptidase, S33 M1S25_08675 PF00108 Thiolase, N-terminal domain M1S25_08675 PF02803 Thiolase, C-terminal domain M1S25_08680 PF01144 Coenzyme A transferase M1S25_08685 PF01144 Coenzyme A transferase M1S25_08690 PF00775 Dioxygenase M1S25_08690 PF04444 Catechol dioxygenase N terminus M1S25_08695 PF02426 Muconolactone delta-isomerase M1S25_08700 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S25_08700 PF13378 Enolase C-terminal domain-like M1S25_08705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_08705 PF03466 LysR substrate binding domain M1S25_08715 PF07729 FCD domain M1S25_08715 PF00392 Bacterial regulatory proteins, gntR family M1S25_08720 PF00920 Dehydratase family M1S25_08725 PF07690 Major Facilitator Superfamily M1S25_08735 PF00171 Aldehyde dehydrogenase family M1S25_08755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_08755 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_08755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_08765 PF00158 Sigma-54 interaction domain M1S25_08765 PF06506 Propionate catabolism activator M1S25_08765 PF02954 Bacterial regulatory protein, Fis family M1S25_08770 PF00501 AMP-binding enzyme M1S25_08770 PF13193 AMP-binding enzyme C-terminal domain M1S25_08775 PF04341 Protein of unknown function, DUF485 M1S25_08780 PF00474 Sodium:solute symporter family M1S25_08785 PF08240 Alcohol dehydrogenase GroES-like domain M1S25_08785 PF00107 Zinc-binding dehydrogenase M1S25_08790 PF00171 Aldehyde dehydrogenase family M1S25_08800 PF00561 alpha/beta hydrolase fold M1S25_08805 PF00199 Catalase M1S25_08805 PF06628 Catalase-related immune-responsive M1S25_08820 PF07859 alpha/beta hydrolase fold M1S25_08825 PF01047 MarR family M1S25_08830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S25_08830 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_08835 PF00106 short chain dehydrogenase M1S25_08840 PF01872 RibD C-terminal domain M1S25_08845 PF00376 MerR family regulatory protein M1S25_08845 PF09278 MerR, DNA binding M1S25_08855 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_08865 PF12706 Beta-lactamase superfamily domain M1S25_08870 PF00440 Bacterial regulatory proteins, tetR family M1S25_08870 PF08359 YsiA-like protein, C-terminal region M1S25_08880 PF00857 Isochorismatase family M1S25_08885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_08885 PF03466 LysR substrate binding domain M1S25_08890 PF07995 Glucose / Sorbosone dehydrogenase M1S25_08895 PF00999 Sodium/hydrogen exchanger family M1S25_08895 PF02254 TrkA-N domain M1S25_08905 PF07687 Peptidase dimerisation domain M1S25_08905 PF01546 Peptidase family M20/M25/M40 M1S25_08915 PF08479 POTRA domain, ShlB-type M1S25_08915 PF17287 POTRA domain M1S25_08915 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M1S25_08920 PF04829 Pre-toxin domain with VENN motif M1S25_08920 PF13018 Extended Signal Peptide of Type V secretion system M1S25_08920 PF13332 Hemagglutinin repeat M1S25_08920 PF05860 haemagglutination activity domain M1S25_08935 PF07690 Major Facilitator Superfamily M1S25_08940 PF04909 Amidohydrolase M1S25_08950 PF00392 Bacterial regulatory proteins, gntR family M1S25_08950 PF07702 UTRA domain M1S25_08955 PF08450 SMP-30/Gluconolactonase/LRE-like region M1S25_08965 PF03466 LysR substrate binding domain M1S25_08965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_08985 PF07690 Major Facilitator Superfamily M1S25_08990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S25_08990 PF01842 ACT domain M1S25_08990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S25_08995 PF03737 Aldolase/RraA M1S25_09025 PF00529 HlyD membrane-fusion protein of T1SS M1S25_09025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S25_09045 PF00920 Dehydratase family M1S25_09055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_09055 PF03466 LysR substrate binding domain M1S25_09060 PF01370 NAD dependent epimerase/dehydratase family M1S25_09065 PF07690 Major Facilitator Superfamily M1S25_09070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S25_09070 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S25_09075 PF06719 AraC-type transcriptional regulator N-terminus M1S25_09075 PF12833 Helix-turn-helix domain M1S25_09090 PF00107 Zinc-binding dehydrogenase M1S25_09090 PF08240 Alcohol dehydrogenase GroES-like domain M1S25_09100 PF01032 FecCD transport family M1S25_09105 PF00005 ABC transporter M1S25_09125 PF14572 Phosphoribosyl synthetase-associated domain M1S25_09125 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S25_09130 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S25_09205 PF00196 Bacterial regulatory proteins, luxR family M1S25_09210 PF01425 Amidase M1S25_09215 PF13533 Biotin-lipoyl like M1S25_09220 PF07690 Major Facilitator Superfamily M1S25_09245 PF01975 Survival protein SurE M1S25_09255 PF13291 ACT domain M1S25_09255 PF04607 Region found in RelA / SpoT proteins M1S25_09255 PF02824 TGS domain M1S25_09305 PF12146 Serine aminopeptidase, S33 M1S25_09310 PF12833 Helix-turn-helix domain M1S25_09310 PF02311 AraC-like ligand binding domain M1S25_09320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_09320 PF00512 His Kinase A (phospho-acceptor) domain M1S25_09320 PF16527 Two-component sensor protein CpxA, periplasmic domain M1S25_09320 PF00672 HAMP domain M1S25_09340 PF00529 HlyD membrane-fusion protein of T1SS M1S25_09340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S25_09345 PF00873 AcrB/AcrD/AcrF family M1S25_09350 PF02321 Outer membrane efflux protein M1S25_09355 PF12146 Serine aminopeptidase, S33 M1S25_09360 PF00743 Flavin-binding monooxygenase-like M1S25_09365 PF01593 Flavin containing amine oxidoreductase M1S25_09380 PF01266 FAD dependent oxidoreductase M1S25_09400 PF16970 Type-1 fimbrial protein, A M1S25_09410 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S25_09410 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S25_09415 PF13953 PapC C-terminal domain M1S25_09415 PF13954 PapC N-terminal domain M1S25_09415 PF00577 Outer membrane usher protein M1S25_09420 PF00419 Fimbrial protein M1S25_09430 PF00107 Zinc-binding dehydrogenase M1S25_09430 PF08240 Alcohol dehydrogenase GroES-like domain M1S25_09440 PF00199 Catalase M1S25_09455 PF13091 PLD-like domain M1S25_09470 PF01244 Membrane dipeptidase (Peptidase family M19) M1S25_09475 PF04055 Radical SAM superfamily M1S25_09475 PF13186 Iron-sulfur cluster-binding domain M1S25_09480 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M1S25_09485 PF03070 TENA/THI-4/PQQC family M1S25_09490 PF12706 Beta-lactamase superfamily domain M1S25_09495 PF08042 PqqA family M1S25_09500 PF17941 Polyphosphate kinase C-terminal domain 1 M1S25_09500 PF13090 Polyphosphate kinase C-terminal domain 2 M1S25_09500 PF13089 Polyphosphate kinase N-terminal domain M1S25_09500 PF02503 Polyphosphate kinase middle domain M1S25_09505 PF00149 Calcineurin-like phosphoesterase M1S25_09515 PF00550 Phosphopantetheine attachment site M1S25_09515 PF00857 Isochorismatase family M1S25_09520 PF00106 short chain dehydrogenase M1S25_09525 PF00005 ABC transporter M1S25_09525 PF03459 TOBE domain M1S25_09530 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_09540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_09540 PF03459 TOBE domain M1S25_09545 PF00355 Rieske [2Fe-2S] domain M1S25_09545 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S25_09550 PF00866 Ring hydroxylating beta subunit M1S25_09555 PF00970 Oxidoreductase FAD-binding domain M1S25_09555 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S25_09555 PF00175 Oxidoreductase NAD-binding domain M1S25_09560 PF12833 Helix-turn-helix domain M1S25_09560 PF14525 AraC-binding-like domain M1S25_09570 PF01613 Flavin reductase like domain M1S25_09585 PF01738 Dienelactone hydrolase family M1S25_09590 PF07690 Major Facilitator Superfamily M1S25_09595 PF06719 AraC-type transcriptional regulator N-terminus M1S25_09595 PF12833 Helix-turn-helix domain M1S25_09620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_09620 PF03466 LysR substrate binding domain M1S25_09625 PF01144 Coenzyme A transferase M1S25_09630 PF01144 Coenzyme A transferase M1S25_09635 PF02667 Short chain fatty acid transporter M1S25_09640 PF02803 Thiolase, C-terminal domain M1S25_09640 PF00108 Thiolase, N-terminal domain M1S25_09645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_09645 PF03466 LysR substrate binding domain M1S25_09650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_09650 PF03466 LysR substrate binding domain M1S25_09665 PF10415 Fumarase C C-terminus M1S25_09665 PF00206 Lyase M1S25_09670 PF00593 TonB dependent receptor M1S25_09670 PF07715 TonB-dependent Receptor Plug Domain M1S25_09675 PF00083 Sugar (and other) transporter M1S25_09690 PF00005 ABC transporter M1S25_09695 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_09700 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S25_09715 PF07702 UTRA domain M1S25_09715 PF00392 Bacterial regulatory proteins, gntR family M1S25_09725 PF02525 Flavodoxin-like fold M1S25_09730 PF01638 HxlR-like helix-turn-helix M1S25_09735 PF06445 GyrI-like small molecule binding domain M1S25_09735 PF12833 Helix-turn-helix domain M1S25_09750 PF01925 Sulfite exporter TauE/SafE M1S25_09765 PF00753 Metallo-beta-lactamase superfamily M1S25_09765 PF04273 Putative phosphatase (DUF442) M1S25_09770 PF00158 Sigma-54 interaction domain M1S25_09770 PF00072 Response regulator receiver domain M1S25_09770 PF02954 Bacterial regulatory protein, Fis family M1S25_09775 PF01062 Bestrophin, RFP-TM, chloride channel M1S25_09780 PF08240 Alcohol dehydrogenase GroES-like domain M1S25_09780 PF00107 Zinc-binding dehydrogenase M1S25_09785 PF00106 short chain dehydrogenase M1S25_09790 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_09790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S25_09795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S25_09795 PF02817 e3 binding domain M1S25_09795 PF00364 Biotin-requiring enzyme M1S25_09800 PF02780 Transketolase, C-terminal domain M1S25_09800 PF02779 Transketolase, pyrimidine binding domain M1S25_09805 PF00676 Dehydrogenase E1 component M1S25_09810 PF04055 Radical SAM superfamily M1S25_09825 PF08448 PAS fold M1S25_09825 PF00990 Diguanylate cyclase, GGDEF domain M1S25_09830 PF01264 Chorismate synthase M1S25_09835 PF05175 Methyltransferase small domain M1S25_09840 PF00291 Pyridoxal-phosphate dependent enzyme M1S25_09850 PF17862 AAA+ lid domain M1S25_09850 PF01434 Peptidase family M41 M1S25_09850 PF00004 ATPase family associated with various cellular activities (AAA) M1S25_09860 PF05166 YcgL domain M1S25_09880 PF00570 HRDC domain M1S25_09880 PF01612 3'-5' exonuclease M1S25_09885 PF13662 Toprim domain M1S25_09885 PF02132 RecR protein M1S25_09890 PF02575 YbaB/EbfC DNA-binding family M1S25_09900 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S25_09905 PF00561 alpha/beta hydrolase fold M1S25_09910 PF08241 Methyltransferase domain M1S25_09940 PF01230 HIT domain M1S25_09975 PF00005 ABC transporter M1S25_09980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S25_09990 PF02684 Lipid-A-disaccharide synthetase M1S25_09995 PF07715 TonB-dependent Receptor Plug Domain M1S25_09995 PF00593 TonB dependent receptor M1S25_10015 PF01925 Sulfite exporter TauE/SafE M1S25_10020 PF00793 DAHP synthetase I family M1S25_10025 PF02654 Cobalamin-5-phosphate synthase M1S25_10040 PF02277 Phosphoribosyltransferase M1S25_10045 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M1S25_10055 PF13419 Haloacid dehalogenase-like hydrolase M1S25_10080 PF07715 TonB-dependent Receptor Plug Domain M1S25_10080 PF00593 TonB dependent receptor M1S25_10100 PF04183 IucA / IucC family M1S25_10100 PF06276 Ferric iron reductase FhuF-like transporter M1S25_10105 PF07690 Major Facilitator Superfamily M1S25_10110 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S25_10115 PF06276 Ferric iron reductase FhuF-like transporter M1S25_10115 PF04183 IucA / IucC family M1S25_10120 PF04073 Aminoacyl-tRNA editing domain M1S25_10130 PF03109 ABC1 family M1S25_10135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_10135 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_10135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_10140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_10140 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_10140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_10145 PF00487 Fatty acid desaturase M1S25_10150 PF12852 Cupin M1S25_10150 PF12833 Helix-turn-helix domain M1S25_10155 PF00639 PPIC-type PPIASE domain M1S25_10155 PF09312 SurA N-terminal domain M1S25_10160 PF00216 Bacterial DNA-binding protein M1S25_10175 PF02082 Transcriptional regulator M1S25_10180 PF00266 Aminotransferase class-V M1S25_10185 PF01592 NifU-like N terminal domain M1S25_10190 PF01521 Iron-sulphur cluster biosynthesis M1S25_10195 PF00226 DnaJ domain M1S25_10195 PF07743 HSCB C-terminal oligomerisation domain M1S25_10200 PF00012 Hsp70 protein M1S25_10205 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S25_10210 PF00211 Adenylate and Guanylate cyclase catalytic domain M1S25_10220 PF00270 DEAD/DEAH box helicase M1S25_10220 PF03461 TRCF domain M1S25_10220 PF17757 UvrB interaction domain M1S25_10220 PF02559 CarD-like/TRCF domain M1S25_10220 PF00271 Helicase conserved C-terminal domain M1S25_10240 PF03737 Aldolase/RraA M1S25_10245 PF13460 NAD(P)H-binding M1S25_10250 PF01649 Ribosomal protein S20 M1S25_10260 PF00459 Inositol monophosphatase family M1S25_10275 PF00005 ABC transporter M1S25_10275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S25_10280 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_10285 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_10290 PF01432 Peptidase family M3 M1S25_10310 PF00593 TonB dependent receptor M1S25_10310 PF07715 TonB-dependent Receptor Plug Domain M1S25_10320 PF01618 MotA/TolQ/ExbB proton channel family M1S25_10325 PF02472 Biopolymer transport protein ExbD/TolR M1S25_10330 PF02472 Biopolymer transport protein ExbD/TolR M1S25_10340 PF01274 Malate synthase M1S25_10400 PF01551 Peptidase family M23 M1S25_10400 PF01464 Transglycosylase SLT domain M1S25_10400 PF10145 Phage-related minor tail protein M1S25_10460 PF04860 Phage portal protein M1S25_10615 PF02899 Phage integrase, N-terminal SAM-like domain M1S25_10615 PF00589 Phage integrase family M1S25_10620 PF03969 AFG1-like ATPase M1S25_10630 PF00743 Flavin-binding monooxygenase-like M1S25_10640 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M1S25_10650 PF00216 Bacterial DNA-binding protein M1S25_10655 PF00575 S1 RNA binding domain M1S25_10660 PF02224 Cytidylate kinase M1S25_10670 PF14437 MafB19-like deaminase M1S25_10680 PF03167 Uracil DNA glycosylase superfamily M1S25_10690 PF03934 Type II secretion system (T2SS), protein K M1S25_10695 PF11612 Type II secretion system (T2SS), protein J M1S25_10695 PF07963 Prokaryotic N-terminal methylation motif M1S25_10700 PF02501 Type II secretion system (T2SS), protein I M1S25_10700 PF07963 Prokaryotic N-terminal methylation motif M1S25_10715 PF01026 TatD related DNase M1S25_10725 PF09115 DNA polymerase III, delta subunit, C terminal M1S25_10730 PF02348 Cytidylyltransferase M1S25_10735 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M1S25_10740 PF00005 ABC transporter M1S25_10740 PF00664 ABC transporter transmembrane region M1S25_10750 PF01618 MotA/TolQ/ExbB proton channel family M1S25_10755 PF02195 ParB-like nuclease domain M1S25_10755 PF17762 HTH domain found in ParB protein M1S25_10760 PF13614 AAA domain M1S25_10765 PF02527 rRNA small subunit methyltransferase G M1S25_10770 PF00483 Nucleotidyl transferase M1S25_10780 PF04453 LPS transport system D M1S25_10780 PF03968 OstA-like protein M1S25_10785 PF00639 PPIC-type PPIASE domain M1S25_10785 PF09312 SurA N-terminal domain M1S25_10790 PF01116 Fructose-bisphosphate aldolase class-II M1S25_10800 PF00162 Phosphoglycerate kinase M1S25_10810 PF02545 Maf-like protein M1S25_10815 PF08007 Cupin superfamily protein M1S25_10830 PF00375 Sodium:dicarboxylate symporter family M1S25_10835 PF06912 Protein of unknown function (DUF1275) M1S25_10840 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M1S25_10845 PF00664 ABC transporter transmembrane region M1S25_10845 PF00005 ABC transporter M1S25_10855 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S25_10855 PF12833 Helix-turn-helix domain M1S25_10860 PF01597 Glycine cleavage H-protein M1S25_10865 PF02146 Sir2 family M1S25_10870 PF00474 Sodium:solute symporter family M1S25_10875 PF01037 Lrp/AsnC ligand binding domain M1S25_10880 PF00171 Aldehyde dehydrogenase family M1S25_10880 PF01619 Proline dehydrogenase M1S25_10880 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M1S25_10880 PF14850 DNA-binding domain of Proline dehydrogenase M1S25_10885 PF04229 GrpB protein M1S25_10890 PF05958 tRNA (Uracil-5-)-methyltransferase M1S25_10900 PF09992 Phosphodiester glycosidase M1S25_10910 PF04264 YceI-like domain M1S25_10920 PF02780 Transketolase, C-terminal domain M1S25_10920 PF00456 Transketolase, thiamine diphosphate binding domain M1S25_10920 PF02779 Transketolase, pyrimidine binding domain M1S25_10925 PF02773 S-adenosylmethionine synthetase, C-terminal domain M1S25_10925 PF02772 S-adenosylmethionine synthetase, central domain M1S25_10925 PF00438 S-adenosylmethionine synthetase, N-terminal domain M1S25_10950 PF00905 Penicillin binding protein transpeptidase domain M1S25_10965 PF02075 Crossover junction endodeoxyribonuclease RuvC M1S25_10970 PF03853 YjeF-related protein N-terminus M1S25_10970 PF01256 Carbohydrate kinase M1S25_10975 PF08331 Domain of unknown function (DUF1730) M1S25_10980 PF04055 Radical SAM superfamily M1S25_10980 PF06968 Biotin and Thiamin Synthesis associated domain M1S25_10995 PF16970 Type-1 fimbrial protein, A M1S25_11000 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S25_11000 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S25_11005 PF13953 PapC C-terminal domain M1S25_11005 PF00577 Outer membrane usher protein M1S25_11005 PF13954 PapC N-terminal domain M1S25_11025 PF00892 EamA-like transporter family M1S25_11035 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S25_11045 PF03466 LysR substrate binding domain M1S25_11045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_11065 PF00440 Bacterial regulatory proteins, tetR family M1S25_11075 PF01709 Transcriptional regulator M1S25_11080 PF01037 Lrp/AsnC ligand binding domain M1S25_11090 PF00005 ABC transporter M1S25_11095 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_11100 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_11115 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S25_11115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_11125 PF00296 Luciferase-like monooxygenase M1S25_11130 PF03180 NLPA lipoprotein M1S25_11135 PF03180 NLPA lipoprotein M1S25_11140 PF09383 NIL domain M1S25_11140 PF00005 ABC transporter M1S25_11145 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_11150 PF01926 50S ribosome-binding GTPase M1S25_11150 PF06071 Protein of unknown function (DUF933) M1S25_11175 PF03591 AzlC protein M1S25_11180 PF05437 Branched-chain amino acid transport protein (AzlD) M1S25_11195 PF01909 Nucleotidyltransferase domain M1S25_11195 PF01966 HD domain M1S25_11195 PF08335 GlnD PII-uridylyltransferase M1S25_11200 PF00155 Aminotransferase class I and II M1S25_11210 PF12852 Cupin M1S25_11210 PF12833 Helix-turn-helix domain M1S25_11215 PF00255 Glutathione peroxidase M1S25_11220 PF01641 SelR domain M1S25_11225 PF00155 Aminotransferase class I and II M1S25_11230 PF00375 Sodium:dicarboxylate symporter family M1S25_11235 PF00710 Asparaginase, N-terminal M1S25_11235 PF17763 Glutaminase/Asparaginase C-terminal domain M1S25_11240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S25_11240 PF01336 OB-fold nucleic acid binding domain M1S25_11240 PF02811 PHP domain M1S25_11240 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S25_11240 PF14579 Helix-hairpin-helix motif M1S25_11245 PF00588 SpoU rRNA Methylase family M1S25_11250 PF00132 Bacterial transferase hexapeptide (six repeats) M1S25_11280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_11280 PF03466 LysR substrate binding domain M1S25_11285 PF01758 Sodium Bile acid symporter family M1S25_11290 PF01022 Bacterial regulatory protein, arsR family M1S25_11295 PF03960 ArsC family M1S25_11305 PF01979 Amidohydrolase family M1S25_11305 PF13382 Adenine deaminase C-terminal domain M1S25_11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_11315 PF03466 LysR substrate binding domain M1S25_11325 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S25_11330 PF01177 Asp/Glu/Hydantoin racemase M1S25_11335 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M1S25_11340 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_11345 PF00005 ABC transporter M1S25_11350 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S25_11360 PF00083 Sugar (and other) transporter M1S25_11365 PF00296 Luciferase-like monooxygenase M1S25_11370 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S25_11370 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_11370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_11380 PF01654 Cytochrome bd terminal oxidase subunit I M1S25_11385 PF02322 Cytochrome bd terminal oxidase subunit II M1S25_11395 PF00392 Bacterial regulatory proteins, gntR family M1S25_11395 PF00155 Aminotransferase class I and II M1S25_11400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_11400 PF03466 LysR substrate binding domain M1S25_11415 PF00698 Acyl transferase domain M1S25_11420 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M1S25_11430 PF01039 Carboxyl transferase domain M1S25_11435 PF06857 Malonate decarboxylase delta subunit (MdcD) M1S25_11440 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M1S25_11445 PF16957 Malonate decarboxylase, alpha subunit, transporter M1S25_11450 PF07690 Major Facilitator Superfamily M1S25_11465 PF00155 Aminotransferase class I and II M1S25_11465 PF00392 Bacterial regulatory proteins, gntR family M1S25_11470 PF04172 LrgB-like family M1S25_11475 PF03788 LrgA family M1S25_11480 PF03466 LysR substrate binding domain M1S25_11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_11485 PF14834 Glutathione S-transferase, C-terminal domain M1S25_11485 PF02798 Glutathione S-transferase, N-terminal domain M1S25_11490 PF02798 Glutathione S-transferase, N-terminal domain M1S25_11495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_11495 PF03466 LysR substrate binding domain M1S25_11505 PF00581 Rhodanese-like domain M1S25_11510 PF00132 Bacterial transferase hexapeptide (six repeats) M1S25_11520 PF00266 Aminotransferase class-V M1S25_11530 PF01810 LysE type translocator M1S25_11535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_11535 PF03466 LysR substrate binding domain M1S25_11545 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S25_11550 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S25_11555 PF00005 ABC transporter M1S25_11560 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_11565 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_11580 PF00072 Response regulator receiver domain M1S25_11585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_11585 PF00512 His Kinase A (phospho-acceptor) domain M1S25_11585 PF09308 LuxQ, periplasmic M1S25_11585 PF00072 Response regulator receiver domain M1S25_11595 PF01037 Lrp/AsnC ligand binding domain M1S25_11595 PF13404 AsnC-type helix-turn-helix domain M1S25_11605 PF00717 Peptidase S24-like M1S25_11630 PF18011 C-terminal domain found in long catalases M1S25_11630 PF06628 Catalase-related immune-responsive M1S25_11630 PF00199 Catalase M1S25_11640 PF02464 Competence-damaged protein M1S25_11640 PF18146 Damage-inducible protein CinA KH domain M1S25_11640 PF00994 Probable molybdopterin binding domain M1S25_11675 PF03466 LysR substrate binding domain M1S25_11675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_11695 PF13193 AMP-binding enzyme C-terminal domain M1S25_11695 PF00501 AMP-binding enzyme M1S25_11700 PF00440 Bacterial regulatory proteins, tetR family M1S25_11705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_11705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_11705 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_11710 PF01039 Carboxyl transferase domain M1S25_11715 PF00378 Enoyl-CoA hydratase/isomerase M1S25_11720 PF00364 Biotin-requiring enzyme M1S25_11720 PF00289 Biotin carboxylase, N-terminal domain M1S25_11720 PF02785 Biotin carboxylase C-terminal domain M1S25_11720 PF18140 Propionyl-coenzyme A carboxylase BT domain M1S25_11720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S25_11725 PF00682 HMGL-like M1S25_11730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_11730 PF03466 LysR substrate binding domain M1S25_11745 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_11745 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S25_11745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_11745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_11755 PF07690 Major Facilitator Superfamily M1S25_11765 PF01144 Coenzyme A transferase M1S25_11770 PF01144 Coenzyme A transferase M1S25_11775 PF07690 Major Facilitator Superfamily M1S25_11780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_11780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_11780 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_11785 PF00378 Enoyl-CoA hydratase/isomerase M1S25_11795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S25_11795 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S25_11795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S25_11800 PF00108 Thiolase, N-terminal domain M1S25_11800 PF02803 Thiolase, C-terminal domain M1S25_11805 PF09339 IclR helix-turn-helix domain M1S25_11810 PF07690 Major Facilitator Superfamily M1S25_11815 PF03060 Nitronate monooxygenase M1S25_11820 PF00378 Enoyl-CoA hydratase/isomerase M1S25_11825 PF09339 IclR helix-turn-helix domain M1S25_11830 PF02515 CoA-transferase family III M1S25_11835 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_11835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_11835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_11840 PF07690 Major Facilitator Superfamily M1S25_11850 PF13419 Haloacid dehalogenase-like hydrolase M1S25_11855 PF00266 Aminotransferase class-V M1S25_11860 PF01266 FAD dependent oxidoreductase M1S25_11865 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_11870 PF08402 TOBE domain M1S25_11870 PF00005 ABC transporter M1S25_11880 PF00392 Bacterial regulatory proteins, gntR family M1S25_11880 PF07702 UTRA domain M1S25_11885 PF01494 FAD binding domain M1S25_11890 PF09339 IclR helix-turn-helix domain M1S25_11890 PF01614 Bacterial transcriptional regulator M1S25_11895 PF02525 Flavodoxin-like fold M1S25_11900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_11900 PF03466 LysR substrate binding domain M1S25_11905 PF02627 Carboxymuconolactone decarboxylase family M1S25_11910 PF00171 Aldehyde dehydrogenase family M1S25_11920 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S25_11930 PF00171 Aldehyde dehydrogenase family M1S25_11935 PF00296 Luciferase-like monooxygenase M1S25_11940 PF01613 Flavin reductase like domain M1S25_11945 PF12697 Alpha/beta hydrolase family M1S25_11965 PF01292 Prokaryotic cytochrome b561 M1S25_11970 PF00199 Catalase M1S25_12005 PF03061 Thioesterase superfamily M1S25_12010 PF00132 Bacterial transferase hexapeptide (six repeats) M1S25_12015 PF07848 PaaX-like protein M1S25_12015 PF08223 PaaX-like protein C-terminal domain M1S25_12020 PF00501 AMP-binding enzyme M1S25_12020 PF14535 AMP-binding enzyme C-terminal domain M1S25_12025 PF02803 Thiolase, C-terminal domain M1S25_12025 PF00108 Thiolase, N-terminal domain M1S25_12030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S25_12030 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S25_12030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S25_12035 PF00378 Enoyl-CoA hydratase/isomerase M1S25_12040 PF00378 Enoyl-CoA hydratase/isomerase M1S25_12045 PF00175 Oxidoreductase NAD-binding domain M1S25_12045 PF00970 Oxidoreductase FAD-binding domain M1S25_12045 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S25_12050 PF01883 Iron-sulfur cluster assembly protein M1S25_12055 PF05138 Phenylacetic acid catabolic protein M1S25_12060 PF06243 Phenylacetic acid degradation B M1S25_12065 PF05138 Phenylacetic acid catabolic protein M1S25_12070 PF00171 Aldehyde dehydrogenase family M1S25_12070 PF01575 MaoC like domain M1S25_12075 PF03313 Serine dehydratase alpha chain M1S25_12075 PF03315 Serine dehydratase beta chain M1S25_12080 PF13520 Amino acid permease M1S25_12085 PF00171 Aldehyde dehydrogenase family M1S25_12090 PF00083 Sugar (and other) transporter M1S25_12100 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_12100 PF04324 BFD-like [2Fe-2S] binding domain M1S25_12110 PF01266 FAD dependent oxidoreductase M1S25_12115 PF05544 Proline racemase M1S25_12120 PF00392 Bacterial regulatory proteins, gntR family M1S25_12130 PF00701 Dihydrodipicolinate synthetase family M1S25_12140 PF00376 MerR family regulatory protein M1S25_12140 PF09278 MerR, DNA binding M1S25_12155 PF02677 Epoxyqueuosine reductase QueH M1S25_12170 PF07690 Major Facilitator Superfamily M1S25_12175 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S25_12185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_12185 PF03466 LysR substrate binding domain M1S25_12205 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M1S25_12210 PF06812 ImpA, N-terminal, type VI secretion system M1S25_12215 PF10431 C-terminal, D2-small domain, of ClpB protein M1S25_12215 PF00004 ATPase family associated with various cellular activities (AAA) M1S25_12215 PF07724 AAA domain (Cdc48 subfamily) M1S25_12215 PF17871 AAA lid domain M1S25_12230 PF00691 OmpA family M1S25_12230 PF01389 OmpA-like transmembrane domain M1S25_12240 PF14331 ImcF-related N-terminal domain M1S25_12240 PF06744 Type VI secretion protein IcmF C-terminal M1S25_12240 PF06761 Intracellular multiplication and human macrophage-killing M1S25_12255 PF05947 Type VI secretion system, TssF M1S25_12270 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M1S25_12295 PF00005 ABC transporter M1S25_12300 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S25_12305 PF01425 Amidase M1S25_12310 PF01402 Ribbon-helix-helix protein, copG family M1S25_12310 PF08753 NikR C terminal nickel binding domain M1S25_12330 PF02525 Flavodoxin-like fold M1S25_12335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S25_12335 PF00289 Biotin carboxylase, N-terminal domain M1S25_12335 PF02785 Biotin carboxylase C-terminal domain M1S25_12350 PF08240 Alcohol dehydrogenase GroES-like domain M1S25_12350 PF13823 Alcohol dehydrogenase GroES-associated M1S25_12350 PF00107 Zinc-binding dehydrogenase M1S25_12360 PF00440 Bacterial regulatory proteins, tetR family M1S25_12380 PF00654 Voltage gated chloride channel M1S25_12385 PF00364 Biotin-requiring enzyme M1S25_12385 PF00289 Biotin carboxylase, N-terminal domain M1S25_12385 PF02785 Biotin carboxylase C-terminal domain M1S25_12385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S25_12395 PF07286 Protein of unknown function (DUF1445) M1S25_12400 PF03746 LamB/YcsF family M1S25_12405 PF01566 Natural resistance-associated macrophage protein M1S25_12410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_12410 PF03466 LysR substrate binding domain M1S25_12425 PF03527 RHS protein M1S25_12425 PF05593 RHS Repeat M1S25_12430 PF04717 Type VI secretion system, phage-baseplate injector M1S25_12430 PF13296 Putative type VI secretion system Rhs element Vgr M1S25_12430 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S25_12440 PF13419 Haloacid dehalogenase-like hydrolase M1S25_12460 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S25_12460 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S25_12480 PF07690 Major Facilitator Superfamily M1S25_12495 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S25_12500 PF03707 Bacterial signalling protein N terminal repeat M1S25_12500 PF00990 Diguanylate cyclase, GGDEF domain M1S25_12500 PF00563 EAL domain M1S25_12505 PF00892 EamA-like transporter family M1S25_12510 PF01037 Lrp/AsnC ligand binding domain M1S25_12515 PF01624 MutS domain I M1S25_12515 PF05188 MutS domain II M1S25_12515 PF05192 MutS domain III M1S25_12515 PF05190 MutS family domain IV M1S25_12515 PF00488 MutS domain V M1S25_12525 PF00037 4Fe-4S binding domain M1S25_12525 PF11953 Domain of unknown function (DUF3470) M1S25_12535 PF01596 O-methyltransferase M1S25_12545 PF00132 Bacterial transferase hexapeptide (six repeats) M1S25_12550 PF01205 Uncharacterized protein family UPF0029 M1S25_12560 PF00664 ABC transporter transmembrane region M1S25_12560 PF00005 ABC transporter M1S25_12560 PF03412 Peptidase C39 family M1S25_12565 PF02321 Outer membrane efflux protein M1S25_12570 PF00005 ABC transporter M1S25_12570 PF12399 Branched-chain amino acid ATP-binding cassette transporter M1S25_12575 PF03968 OstA-like protein M1S25_12590 PF00571 CBS domain M1S25_12590 PF01380 SIS domain M1S25_12595 PF09190 DALR domain M1S25_12595 PF01406 tRNA synthetases class I (C) catalytic domain M1S25_12620 PF01638 HxlR-like helix-turn-helix M1S25_12625 PF07690 Major Facilitator Superfamily M1S25_12650 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S25_12650 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S25_12660 PF00313 'Cold-shock' DNA-binding domain M1S25_12665 PF01810 LysE type translocator M1S25_12695 PF02601 Exonuclease VII, large subunit M1S25_12695 PF13742 OB-fold nucleic acid binding domain M1S25_12730 PF09278 MerR, DNA binding M1S25_12730 PF00376 MerR family regulatory protein M1S25_12735 PF00403 Heavy-metal-associated domain M1S25_12740 PF00403 Heavy-metal-associated domain M1S25_12745 PF03466 LysR substrate binding domain M1S25_12745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_12755 PF00355 Rieske [2Fe-2S] domain M1S25_12755 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S25_12760 PF00866 Ring hydroxylating beta subunit M1S25_12765 PF00175 Oxidoreductase NAD-binding domain M1S25_12765 PF00970 Oxidoreductase FAD-binding domain M1S25_12765 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S25_12770 PF00106 short chain dehydrogenase M1S25_12775 PF03594 Benzoate membrane transport protein M1S25_12780 PF07690 Major Facilitator Superfamily M1S25_12790 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M1S25_12790 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M1S25_12795 PF11898 Domain of unknown function (DUF3418) M1S25_12795 PF04408 Helicase associated domain (HA2) M1S25_12795 PF00271 Helicase conserved C-terminal domain M1S25_12795 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M1S25_12795 PF00270 DEAD/DEAH box helicase M1S25_12800 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S25_12800 PF00578 AhpC/TSA family M1S25_12820 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_12820 PF13192 Thioredoxin domain M1S25_12840 PF02390 Putative methyltransferase M1S25_12845 PF00043 Glutathione S-transferase, C-terminal domain M1S25_12845 PF13417 Glutathione S-transferase, N-terminal domain M1S25_12855 PF13488 Glycine zipper M1S25_12855 PF00691 OmpA family M1S25_12860 PF01979 Amidohydrolase family M1S25_12865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S25_12865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S25_12875 PF10672 S-adenosylmethionine-dependent methyltransferase M1S25_12875 PF01170 Putative RNA methylase family UPF0020 M1S25_12875 PF02926 THUMP domain M1S25_12890 PF07724 AAA domain (Cdc48 subfamily) M1S25_12890 PF17871 AAA lid domain M1S25_12890 PF02861 Clp amino terminal domain, pathogenicity island component M1S25_12890 PF10431 C-terminal, D2-small domain, of ClpB protein M1S25_12890 PF00004 ATPase family associated with various cellular activities (AAA) M1S25_12905 PF02566 OsmC-like protein M1S25_12915 PF00027 Cyclic nucleotide-binding domain M1S25_12915 PF13545 Crp-like helix-turn-helix domain M1S25_12925 PF00248 Aldo/keto reductase family M1S25_12940 PF00709 Adenylosuccinate synthetase M1S25_12945 PF13393 Histidyl-tRNA synthetase M1S25_12950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S25_12950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S25_12955 PF02272 DHHA1 domain M1S25_12955 PF01411 tRNA synthetases class II (A) M1S25_12955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S25_12960 PF13840 ACT domain M1S25_12960 PF00696 Amino acid kinase family M1S25_12960 PF01842 ACT domain M1S25_12965 PF02599 Global regulator protein family M1S25_12970 PF01351 Ribonuclease HII M1S25_12980 PF01292 Prokaryotic cytochrome b561 M1S25_12985 PF00962 Adenosine/AMP deaminase M1S25_12990 PF00860 Permease family M1S25_13000 PF00743 Flavin-binding monooxygenase-like M1S25_13005 PF00106 short chain dehydrogenase M1S25_13015 PF17954 Quercetinase C-terminal cupin domain M1S25_13015 PF02678 Pirin M1S25_13020 PF00440 Bacterial regulatory proteins, tetR family M1S25_13020 PF17932 Tetracyclin repressor-like, C-terminal domain M1S25_13030 PF00106 short chain dehydrogenase M1S25_13040 PF13610 DDE domain M1S25_13050 PF02796 Helix-turn-helix domain of resolvase M1S25_13050 PF00239 Resolvase, N terminal domain M1S25_13055 PF11809 Domain of unknown function (DUF3330) M1S25_13055 PF00563 EAL domain M1S25_13065 PF13610 DDE domain M1S25_13100 PF05593 RHS Repeat M1S25_13100 PF03527 RHS protein M1S25_13105 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S25_13105 PF04717 Type VI secretion system, phage-baseplate injector M1S25_13105 PF13296 Putative type VI secretion system Rhs element Vgr M1S25_13125 PF03180 NLPA lipoprotein M1S25_13130 PF05987 Bacterial protein of unknown function (DUF898) M1S25_13145 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_13145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S25_13150 PF00764 Arginosuccinate synthase M1S25_13155 PF00360 Phytochrome region M1S25_13155 PF00563 EAL domain M1S25_13155 PF01590 GAF domain M1S25_13155 PF00990 Diguanylate cyclase, GGDEF domain M1S25_13160 PF01979 Amidohydrolase family M1S25_13165 PF00929 Exonuclease M1S25_13175 PF07715 TonB-dependent Receptor Plug Domain M1S25_13175 PF00593 TonB dependent receptor M1S25_13180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S25_13180 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_13185 PF00005 ABC transporter M1S25_13185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S25_13190 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_13190 PF12911 N-terminal TM domain of oligopeptide transport permease C M1S25_13195 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_13200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1S25_13205 PF01476 LysM domain M1S25_13205 PF01464 Transglycosylase SLT domain M1S25_13205 PF01476 LysM domain M1S25_13205 PF01464 Transglycosylase SLT domain M1S25_13210 PF00929 Exonuclease M1S25_13220 PF00293 NUDIX domain M1S25_13220 PF09297 NADH pyrophosphatase zinc ribbon domain M1S25_13230 PF04972 BON domain M1S25_13235 PF02021 Uncharacterised protein family UPF0102 M1S25_13240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S25_13250 PF03466 LysR substrate binding domain M1S25_13250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_13255 PF01810 LysE type translocator M1S25_13265 PF13411 MerR HTH family regulatory protein M1S25_13275 PF01494 FAD binding domain M1S25_13280 PF01494 FAD binding domain M1S25_13285 PF00557 Metallopeptidase family M24 M1S25_13285 PF05195 Aminopeptidase P, N-terminal domain M1S25_13375 PF10145 Phage-related minor tail protein M1S25_13375 PF01551 Peptidase family M23 M1S25_13375 PF01464 Transglycosylase SLT domain M1S25_13435 PF04860 Phage portal protein M1S25_13535 PF00772 DnaB-like helicase N terminal domain M1S25_13535 PF03796 DnaB-like helicase C terminal domain M1S25_13550 PF01726 LexA DNA binding domain M1S25_13550 PF00717 Peptidase S24-like M1S25_13605 PF00884 Sulfatase M1S25_13605 PF08019 Phosphoethanolamine transferase EptA/EptB M1S25_13650 PF01476 LysM domain M1S25_13650 PF08525 Opacity-associated protein A N-terminal motif M1S25_13650 PF01551 Peptidase family M23 M1S25_13975 PF01812 5-formyltetrahydrofolate cyclo-ligase family M1S25_13980 PF04355 SmpA / OmlA family M1S25_13980 PF00691 OmpA family M1S25_13985 PF05662 Coiled stalk of trimeric autotransporter adhesin M1S25_13985 PF03895 YadA-like membrane anchor domain M1S25_13985 PF05658 Head domain of trimeric autotransporter adhesin M1S25_13985 PF13018 Extended Signal Peptide of Type V secretion system M1S25_13990 PF02190 ATP-dependent protease La (LON) substrate-binding domain M1S25_13990 PF00004 ATPase family associated with various cellular activities (AAA) M1S25_13990 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S25_13995 PF02590 Predicted SPOUT methyltransferase M1S25_14000 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M1S25_14010 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S25_14010 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S25_14015 PF04060 Putative Fe-S cluster M1S25_14020 PF00633 Helix-hairpin-helix motif M1S25_14020 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S25_14020 PF10576 Iron-sulfur binding domain of endonuclease III M1S25_14030 PF05191 Adenylate kinase, active site lid M1S25_14045 PF00905 Penicillin binding protein transpeptidase domain M1S25_14045 PF03717 Penicillin-binding Protein dimerisation domain M1S25_14060 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S25_14065 PF01730 UreF M1S25_14070 PF05194 UreE urease accessory protein, C-terminal domain M1S25_14070 PF02814 UreE urease accessory protein, N-terminal domain M1S25_14075 PF00449 Urease alpha-subunit, N-terminal domain M1S25_14075 PF01979 Amidohydrolase family M1S25_14080 PF00699 Urease beta subunit M1S25_14085 PF00547 Urease, gamma subunit M1S25_14090 PF01774 UreD urease accessory protein M1S25_14105 PF00463 Isocitrate lyase family M1S25_14110 PF03466 LysR substrate binding domain M1S25_14110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_14115 PF01595 Cyclin M transmembrane N-terminal domain M1S25_14115 PF03471 Transporter associated domain M1S25_14115 PF00571 CBS domain M1S25_14120 PF03600 Citrate transporter M1S25_14135 PF00009 Elongation factor Tu GTP binding domain M1S25_14140 PF01507 Phosphoadenosine phosphosulfate reductase family M1S25_14150 PF14052 Capsule assembly protein Wzi M1S25_14155 PF01336 OB-fold nucleic acid binding domain M1S25_14155 PF00152 tRNA synthetases class II (D, K and N) M1S25_14170 PF00301 Rubredoxin M1S25_14175 PF18113 Rubredoxin binding C-terminal domain M1S25_14175 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_14180 PF00561 alpha/beta hydrolase fold M1S25_14185 PF03466 LysR substrate binding domain M1S25_14185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_14195 PF02503 Polyphosphate kinase middle domain M1S25_14195 PF13090 Polyphosphate kinase C-terminal domain 2 M1S25_14195 PF17941 Polyphosphate kinase C-terminal domain 1 M1S25_14195 PF13089 Polyphosphate kinase N-terminal domain M1S25_14200 PF00912 Transglycosylase M1S25_14205 PF01694 Rhomboid family M1S25_14215 PF00005 ABC transporter M1S25_14220 PF13472 GDSL-like Lipase/Acylhydrolase family M1S25_14225 PF00484 Carbonic anhydrase M1S25_14230 PF00561 alpha/beta hydrolase fold M1S25_14240 PF07715 TonB-dependent Receptor Plug Domain M1S25_14240 PF00593 TonB dependent receptor M1S25_14245 PF01521 Iron-sulphur cluster biosynthesis M1S25_14245 PF01106 NifU-like domain M1S25_14255 PF00884 Sulfatase M1S25_14260 PF03781 Sulfatase-modifying factor enzyme 1 M1S25_14275 PF00291 Pyridoxal-phosphate dependent enzyme M1S25_14280 PF01384 Phosphate transporter family M1S25_14285 PF02310 B12 binding domain M1S25_14285 PF02607 B12 binding domain M1S25_14285 PF02965 Vitamin B12 dependent methionine synthase, activation domain M1S25_14285 PF00809 Pterin binding enzyme M1S25_14285 PF02574 Homocysteine S-methyltransferase M1S25_14290 PF02779 Transketolase, pyrimidine binding domain M1S25_14290 PF02780 Transketolase, C-terminal domain M1S25_14295 PF00456 Transketolase, thiamine diphosphate binding domain M1S25_14300 PF07690 Major Facilitator Superfamily M1S25_14310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_14310 PF03466 LysR substrate binding domain M1S25_14320 PF01263 Aldose 1-epimerase M1S25_14325 PF07690 Major Facilitator Superfamily M1S25_14330 PF02311 AraC-like ligand binding domain M1S25_14330 PF12833 Helix-turn-helix domain M1S25_14335 PF04960 Glutaminase M1S25_14340 PF01327 Polypeptide deformylase M1S25_14345 PF07690 Major Facilitator Superfamily M1S25_14355 PF00205 Thiamine pyrophosphate enzyme, central domain M1S25_14355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S25_14355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S25_14360 PF00171 Aldehyde dehydrogenase family M1S25_14365 PF01958 Domain of unknown function DUF108 M1S25_14365 PF03447 Homoserine dehydrogenase, NAD binding domain M1S25_14375 PF12697 Alpha/beta hydrolase family M1S25_14385 PF07690 Major Facilitator Superfamily M1S25_14390 PF14759 Reductase C-terminal M1S25_14390 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_14395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S25_14405 PF00355 Rieske [2Fe-2S] domain M1S25_14415 PF00355 Rieske [2Fe-2S] domain M1S25_14420 PF09339 IclR helix-turn-helix domain M1S25_14420 PF01614 Bacterial transcriptional regulator M1S25_14435 PF00378 Enoyl-CoA hydratase/isomerase M1S25_14445 PF00535 Glycosyl transferase family 2 M1S25_14450 PF14883 Hypothetical glycosyl hydrolase family 13 M1S25_14450 PF01522 Polysaccharide deacetylase M1S25_14455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S25_14460 PF07152 YaeQ protein M1S25_14465 PF00375 Sodium:dicarboxylate symporter family M1S25_14470 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S25_14470 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S25_14480 PF03061 Thioesterase superfamily M1S25_14490 PF02028 BCCT, betaine/carnitine/choline family transporter M1S25_14495 PF02028 BCCT, betaine/carnitine/choline family transporter M1S25_14500 PF13977 BetI-type transcriptional repressor, C-terminal M1S25_14500 PF00440 Bacterial regulatory proteins, tetR family M1S25_14505 PF00171 Aldehyde dehydrogenase family M1S25_14510 PF05199 GMC oxidoreductase M1S25_14510 PF00732 GMC oxidoreductase M1S25_14515 PF06039 Malate:quinone oxidoreductase (Mqo) M1S25_14525 PF02574 Homocysteine S-methyltransferase M1S25_14530 PF13520 Amino acid permease M1S25_14555 PF00701 Dihydrodipicolinate synthetase family M1S25_14560 PF00083 Sugar (and other) transporter M1S25_14630 PF10544 T5orf172 domain M1S25_14635 PF13614 AAA domain M1S25_14655 PF00905 Penicillin binding protein transpeptidase domain M1S25_14735 PF02767 DNA polymerase III beta subunit, central domain M1S25_14735 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S25_14735 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S25_14775 PF05016 ParE toxin of type II toxin-antitoxin system, parDE M1S25_14925 PF07007 Lysozyme inhibitor LprI M1S25_14970 PF01695 IstB-like ATP binding protein M1S25_14980 PF00145 C-5 cytosine-specific DNA methylase M1S25_15025 PF01381 Helix-turn-helix M1S25_15025 PF00717 Peptidase S24-like M1S25_15060 PF00929 Exonuclease M1S25_15135 PF07690 Major Facilitator Superfamily M1S25_15140 PF13533 Biotin-lipoyl like M1S25_15145 PF03061 Thioesterase superfamily M1S25_15150 PF00490 Delta-aminolevulinic acid dehydratase M1S25_15155 PF01266 FAD dependent oxidoreductase M1S25_15160 PF08338 Domain of unknown function (DUF1731) M1S25_15160 PF01370 NAD dependent epimerase/dehydratase family M1S25_15180 PF12320 Type 5 capsule protein repressor C-terminal domain M1S25_15180 PF00149 Calcineurin-like phosphoesterase M1S25_15190 PF01168 Alanine racemase, N-terminal domain M1S25_15195 PF00437 Type II/IV secretion system protein M1S25_15200 PF00437 Type II/IV secretion system protein M1S25_15205 PF01475 Ferric uptake regulator family M1S25_15210 PF04355 SmpA / OmlA family M1S25_15215 PF03658 RnfH family Ubiquitin M1S25_15225 PF01814 Hemerythrin HHE cation binding domain M1S25_15230 PF13230 Glutamine amidotransferases class-II M1S25_15240 PF00696 Amino acid kinase family M1S25_15245 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S25_15245 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S25_15245 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S25_15245 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S25_15250 PF00692 dUTPase M1S25_15255 PF00580 UvrD/REP helicase N-terminal domain M1S25_15255 PF13361 UvrD-like helicase C-terminal domain M1S25_15260 PF00691 OmpA family M1S25_15260 PF13488 Glycine zipper M1S25_15265 PF01553 Acyltransferase M1S25_15275 PF03775 Septum formation inhibitor MinC, C-terminal domain M1S25_15280 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M1S25_15285 PF03776 Septum formation topological specificity factor MinE M1S25_15305 PF01810 LysE type translocator M1S25_15310 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M1S25_15310 PF17854 FtsK alpha domain M1S25_15310 PF09397 Ftsk gamma domain M1S25_15310 PF01580 FtsK/SpoIIIE family M1S25_15315 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S25_15320 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M1S25_15325 PF04377 Arginine-tRNA-protein transferase, C terminus M1S25_15325 PF04376 Arginine-tRNA-protein transferase, N terminus M1S25_15330 PF00583 Acetyltransferase (GNAT) family M1S25_15345 PF00009 Elongation factor Tu GTP binding domain M1S25_15345 PF03144 Elongation factor Tu domain 2 M1S25_15345 PF03143 Elongation factor Tu C-terminal domain M1S25_15350 PF00679 Elongation factor G C-terminus M1S25_15350 PF14492 Elongation Factor G, domain II M1S25_15350 PF03764 Elongation factor G, domain IV M1S25_15350 PF03144 Elongation factor Tu domain 2 M1S25_15350 PF00009 Elongation factor Tu GTP binding domain M1S25_15355 PF00177 Ribosomal protein S7p/S5e M1S25_15360 PF00164 Ribosomal protein S12/S23 M1S25_15370 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S25_15370 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S25_15375 PF03653 Uncharacterised protein family (UPF0093) M1S25_15380 PF05726 Pirin C-terminal cupin domain M1S25_15380 PF02678 Pirin M1S25_15390 PF00795 Carbon-nitrogen hydrolase M1S25_15390 PF02540 NAD synthase M1S25_15405 PF00970 Oxidoreductase FAD-binding domain M1S25_15405 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S25_15405 PF00175 Oxidoreductase NAD-binding domain M1S25_15410 PF00171 Aldehyde dehydrogenase family M1S25_15415 PF00355 Rieske [2Fe-2S] domain M1S25_15415 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S25_15420 PF07859 alpha/beta hydrolase fold M1S25_15425 PF02028 BCCT, betaine/carnitine/choline family transporter M1S25_15430 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S25_15435 PF03466 LysR substrate binding domain M1S25_15435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_15455 PF00037 4Fe-4S binding domain M1S25_15460 PF01467 Cytidylyltransferase-like M1S25_15465 PF01668 SmpB protein M1S25_15470 PF03358 NADPH-dependent FMN reductase M1S25_15475 PF02578 Multi-copper polyphenol oxidoreductase laccase M1S25_15480 PF00849 RNA pseudouridylate synthase M1S25_15480 PF01479 S4 domain M1S25_15485 PF13525 Outer membrane lipoprotein M1S25_15490 PF01807 CHC2 zinc finger M1S25_15490 PF08275 DNA primase catalytic core, N-terminal domain M1S25_15490 PF08278 DNA primase DnaG DnaB-binding M1S25_15490 PF10410 DnaB-helicase binding domain of primase M1S25_15495 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M1S25_15495 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M1S25_15495 PF01488 Shikimate / quinate 5-dehydrogenase M1S25_15505 PF03550 Outer membrane lipoprotein LolB M1S25_15510 PF08544 GHMP kinases C terminal M1S25_15510 PF00288 GHMP kinases N terminal domain M1S25_15535 PF14572 Phosphoribosyl synthetase-associated domain M1S25_15535 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S25_15540 PF01386 Ribosomal L25p family M1S25_15545 PF01195 Peptidyl-tRNA hydrolase M1S25_15550 PF02261 Aspartate decarboxylase M1S25_15565 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S25_15575 PF02581 Thiamine monophosphate synthase M1S25_15575 PF03070 TENA/THI-4/PQQC family M1S25_15575 PF08543 Phosphomethylpyrimidine kinase M1S25_15580 PF04972 BON domain M1S25_15580 PF01476 LysM domain M1S25_15585 PF00550 Phosphopantetheine attachment site M1S25_15595 PF00698 Acyl transferase domain M1S25_15600 PF01783 Ribosomal L32p protein family M1S25_15605 PF02620 Large ribosomal RNA subunit accumulation protein YceD M1S25_15610 PF04315 Elongation factor P hydroxylase M1S25_15615 PF01300 Telomere recombination M1S25_15620 PF02616 Segregation and condensation protein ScpA M1S25_15625 PF04079 Segregation and condensation complex subunit ScpB M1S25_15630 PF01479 S4 domain M1S25_15630 PF00849 RNA pseudouridylate synthase M1S25_15645 PF00155 Aminotransferase class I and II M1S25_15650 PF00202 Aminotransferase class-III M1S25_15650 PF06968 Biotin and Thiamin Synthesis associated domain M1S25_15650 PF04055 Radical SAM superfamily M1S25_15655 PF12697 Alpha/beta hydrolase family M1S25_15655 PF08241 Methyltransferase domain M1S25_15660 PF02358 Trehalose-phosphatase M1S25_15665 PF00982 Glycosyltransferase family 20 M1S25_15670 PF07690 Major Facilitator Superfamily M1S25_15675 PF00210 Ferritin-like domain M1S25_15680 PF00533 BRCA1 C Terminus (BRCT) domain M1S25_15680 PF01653 NAD-dependent DNA ligase adenylation domain M1S25_15680 PF03120 NAD-dependent DNA ligase OB-fold domain M1S25_15680 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M1S25_15680 PF12826 Helix-hairpin-helix motif M1S25_15690 PF06470 SMC proteins Flexible Hinge Domain M1S25_15690 PF02463 RecF/RecN/SMC N terminal domain M1S25_15700 PF01925 Sulfite exporter TauE/SafE M1S25_15710 PF03309 Type III pantothenate kinase M1S25_15715 PF00448 SRP54-type protein, GTPase domain M1S25_15715 PF02881 SRP54-type protein, helical bundle domain M1S25_15715 PF02978 Signal peptide binding domain M1S25_15725 PF01207 Dihydrouridine synthase (Dus) M1S25_15755 PF00692 dUTPase M1S25_15770 PF01048 Phosphorylase superfamily M1S25_15775 PF10609 NUBPL iron-transfer P-loop NTPase M1S25_15785 PF09334 tRNA synthetases class I (M) M1S25_15785 PF01588 Putative tRNA binding domain M1S25_15810 PF13533 Biotin-lipoyl like M1S25_15815 PF00291 Pyridoxal-phosphate dependent enzyme M1S25_15830 PF05552 Conserved TM helix M1S25_15845 PF00970 Oxidoreductase FAD-binding domain M1S25_15845 PF00175 Oxidoreductase NAD-binding domain M1S25_15850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_15850 PF03466 LysR substrate binding domain M1S25_15855 PF00313 'Cold-shock' DNA-binding domain M1S25_15865 PF00361 Proton-conducting membrane transporter M1S25_15870 PF00361 Proton-conducting membrane transporter M1S25_15875 PF00361 Proton-conducting membrane transporter M1S25_15875 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S25_15880 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S25_15885 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M1S25_15890 PF12838 4Fe-4S dicluster domain M1S25_15895 PF00146 NADH dehydrogenase M1S25_15900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S25_15900 PF00384 Molybdopterin oxidoreductase M1S25_15900 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M1S25_15905 PF10531 SLBB domain M1S25_15905 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M1S25_15905 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M1S25_15915 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M1S25_15915 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M1S25_15920 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M1S25_15925 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M1S25_15930 PF17151 Periplasmic sensor domain M1S25_15930 PF00990 Diguanylate cyclase, GGDEF domain M1S25_15940 PF00672 HAMP domain M1S25_15940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_15940 PF00512 His Kinase A (phospho-acceptor) domain M1S25_15945 PF00486 Transcriptional regulatory protein, C terminal M1S25_15945 PF00072 Response regulator receiver domain M1S25_15955 PF02867 Ribonucleotide reductase, barrel domain M1S25_15955 PF03477 ATP cone domain M1S25_15955 PF00317 Ribonucleotide reductase, all-alpha domain M1S25_15965 PF00268 Ribonucleotide reductase, small chain M1S25_15975 PF00672 HAMP domain M1S25_15975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_15975 PF13755 Sensor N-terminal transmembrane domain M1S25_15975 PF13756 Stimulus-sensing domain M1S25_15975 PF00512 His Kinase A (phospho-acceptor) domain M1S25_16045 PF13360 PQQ-like domain M1S25_16045 PF01011 PQQ enzyme repeat M1S25_16070 PF02567 Phenazine biosynthesis-like protein M1S25_16095 PF01613 Flavin reductase like domain M1S25_16100 PF08267 Cobalamin-independent synthase, N-terminal domain M1S25_16100 PF01717 Cobalamin-independent synthase, Catalytic domain M1S25_16110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_16110 PF03466 LysR substrate binding domain M1S25_16115 PF01810 LysE type translocator M1S25_16125 PF12833 Helix-turn-helix domain M1S25_16125 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S25_16130 PF01546 Peptidase family M20/M25/M40 M1S25_16130 PF07687 Peptidase dimerisation domain M1S25_16140 PF03466 LysR substrate binding domain M1S25_16140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_16145 PF07690 Major Facilitator Superfamily M1S25_16155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_16155 PF03466 LysR substrate binding domain M1S25_16160 PF14537 Cytochrome c3 M1S25_16160 PF00890 FAD binding domain M1S25_16170 PF02515 CoA-transferase family III M1S25_16175 PF07690 Major Facilitator Superfamily M1S25_16180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_16180 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_16180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_16185 PF03466 LysR substrate binding domain M1S25_16185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_16190 PF08240 Alcohol dehydrogenase GroES-like domain M1S25_16190 PF00107 Zinc-binding dehydrogenase M1S25_16195 PF00962 Adenosine/AMP deaminase M1S25_16220 PF02445 Quinolinate synthetase A protein M1S25_16225 PF01960 ArgJ family M1S25_16230 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S25_16230 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S25_16235 PF00893 Small Multidrug Resistance protein M1S25_16245 PF05275 Copper resistance protein B precursor (CopB) M1S25_16250 PF00394 Multicopper oxidase M1S25_16250 PF07731 Multicopper oxidase M1S25_16250 PF07732 Multicopper oxidase M1S25_16265 PF00834 Ribulose-phosphate 3 epimerase family M1S25_16275 PF00756 Putative esterase M1S25_16285 PF04445 Putative SAM-dependent methyltransferase M1S25_16290 PF00814 Glycoprotease family M1S25_16295 PF00132 Bacterial transferase hexapeptide (six repeats) M1S25_16300 PF00293 NUDIX domain M1S25_16340 PF04715 Anthranilate synthase component I, N terminal region M1S25_16340 PF00425 chorismate binding enzyme M1S25_16345 PF00155 Aminotransferase class I and II M1S25_16350 PF00815 Histidinol dehydrogenase M1S25_16355 PF01634 ATP phosphoribosyltransferase M1S25_16360 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S25_16365 PF01722 BolA-like protein M1S25_16370 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M1S25_16375 PF00309 Sigma-54 factor, Activator interacting domain (AID) M1S25_16375 PF04963 Sigma-54 factor, core binding domain M1S25_16375 PF04552 Sigma-54, DNA binding domain M1S25_16420 PF00795 Carbon-nitrogen hydrolase M1S25_16430 PF01047 MarR family M1S25_16435 PF02566 OsmC-like protein M1S25_16440 PF00437 Type II/IV secretion system protein M1S25_16460 PF01612 3'-5' exonuclease M1S25_16460 PF00476 DNA polymerase family A M1S25_16460 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S25_16460 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S25_16465 PF02325 YGGT family M1S25_16470 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S25_16470 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S25_16475 PF11734 TilS substrate C-terminal domain M1S25_16475 PF09179 TilS substrate binding domain M1S25_16475 PF01171 PP-loop family M1S25_16480 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M1S25_16485 PF02541 Ppx/GppA phosphatase family M1S25_16490 PF00085 Thioredoxin M1S25_16495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S25_16495 PF07497 Rho termination factor, RNA-binding domain M1S25_16495 PF07498 Rho termination factor, N-terminal domain M1S25_16510 PF00216 Bacterial DNA-binding protein M1S25_16515 PF03483 B3/4 domain M1S25_16515 PF03484 tRNA synthetase B5 domain M1S25_16515 PF03147 Ferredoxin-fold anticodon binding domain M1S25_16515 PF01588 Putative tRNA binding domain M1S25_16515 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M1S25_16520 PF01409 tRNA synthetases class II core domain (F) M1S25_16520 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M1S25_16540 PF00453 Ribosomal protein L20 M1S25_16545 PF01632 Ribosomal protein L35 M1S25_16555 PF07690 Major Facilitator Superfamily M1S25_16560 PF09335 SNARE associated Golgi protein M1S25_16565 PF00043 Glutathione S-transferase, C-terminal domain M1S25_16565 PF02798 Glutathione S-transferase, N-terminal domain M1S25_16570 PF00707 Translation initiation factor IF-3, C-terminal domain M1S25_16570 PF05198 Translation initiation factor IF-3, N-terminal domain M1S25_16575 PF03129 Anticodon binding domain M1S25_16575 PF02824 TGS domain M1S25_16575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S25_16575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S25_16580 PF00501 AMP-binding enzyme M1S25_16580 PF13193 AMP-binding enzyme C-terminal domain M1S25_16585 PF04751 Protein of unknown function (DUF615) M1S25_16590 PF00381 PTS HPr component phosphorylation site M1S25_16595 PF03668 P-loop ATPase protein family M1S25_16600 PF02569 Pantoate-beta-alanine ligase M1S25_16605 PF02548 Ketopantoate hydroxymethyltransferase M1S25_16610 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M1S25_16615 PF12626 Polymerase A arginine-rich C-terminus M1S25_16615 PF01743 Poly A polymerase head domain M1S25_16615 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S25_16625 PF03819 MazG nucleotide pyrophosphohydrolase domain M1S25_16635 PF02824 TGS domain M1S25_16635 PF04607 Region found in RelA / SpoT proteins M1S25_16635 PF13291 ACT domain M1S25_16640 PF05958 tRNA (Uracil-5-)-methyltransferase M1S25_16650 PF00291 Pyridoxal-phosphate dependent enzyme M1S25_16655 PF00672 HAMP domain M1S25_16655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_16655 PF01627 Hpt domain M1S25_16655 PF00072 Response regulator receiver domain M1S25_16655 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M1S25_16655 PF00512 His Kinase A (phospho-acceptor) domain M1S25_16660 PF00378 Enoyl-CoA hydratase/isomerase M1S25_16665 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S25_16665 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S25_16670 PF01261 Xylose isomerase-like TIM barrel M1S25_16680 PF00106 short chain dehydrogenase M1S25_16685 PF02233 NAD(P) transhydrogenase beta subunit M1S25_16690 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M1S25_16695 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M1S25_16695 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M1S25_16700 PF00892 EamA-like transporter family M1S25_16710 PF07690 Major Facilitator Superfamily M1S25_16715 PF01207 Dihydrouridine synthase (Dus) M1S25_16725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_16725 PF03466 LysR substrate binding domain M1S25_16735 PF00899 ThiF family M1S25_16745 PF00330 Aconitase family (aconitate hydratase) M1S25_16745 PF00694 Aconitase C-terminal domain M1S25_16750 PF01026 TatD related DNase M1S25_16765 PF16658 Class II release factor RF3, C-terminal domain M1S25_16765 PF00009 Elongation factor Tu GTP binding domain M1S25_16765 PF03144 Elongation factor Tu domain 2 M1S25_16785 PF03707 Bacterial signalling protein N terminal repeat M1S25_16785 PF00563 EAL domain M1S25_16785 PF00990 Diguanylate cyclase, GGDEF domain M1S25_16790 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M1S25_16790 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M1S25_16795 PF10369 Small subunit of acetolactate synthase M1S25_16800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S25_16800 PF00205 Thiamine pyrophosphate enzyme, central domain M1S25_16800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S25_16810 PF09334 tRNA synthetases class I (M) M1S25_16810 PF00133 tRNA synthetases class I (I, L, M and V) M1S25_16810 PF08264 Anticodon-binding domain of tRNA M1S25_16810 PF13603 Leucyl-tRNA synthetase, Domain 2 M1S25_16825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S25_16830 PF02687 FtsX-like permease family M1S25_16830 PF12704 MacB-like periplasmic core domain M1S25_16830 PF00005 ABC transporter M1S25_16835 PF02321 Outer membrane efflux protein M1S25_16850 PF00929 Exonuclease M1S25_16855 PF03193 RsgA GTPase M1S25_16865 PF00462 Glutaredoxin M1S25_16870 PF02556 Preprotein translocase subunit SecB M1S25_16885 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S25_16885 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S25_16900 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S25_16900 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S25_16910 PF04820 Tryptophan halogenase M1S25_16930 PF00221 Aromatic amino acid lyase M1S25_16945 PF00501 AMP-binding enzyme M1S25_16945 PF13193 AMP-binding enzyme C-terminal domain M1S25_16955 PF00550 Phosphopantetheine attachment site M1S25_16960 PF00550 Phosphopantetheine attachment site M1S25_16975 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M1S25_16975 PF01926 50S ribosome-binding GTPase M1S25_16980 PF13360 PQQ-like domain M1S25_16990 PF03129 Anticodon binding domain M1S25_16990 PF13393 Histidyl-tRNA synthetase M1S25_16995 PF04551 GcpE protein M1S25_17000 PF13464 Domain of unknown function (DUF4115) M1S25_17010 PF04055 Radical SAM superfamily M1S25_17015 PF00334 Nucleoside diphosphate kinase M1S25_17020 PF04384 Iron-sulphur cluster assembly M1S25_17025 PF01569 PAP2 superfamily M1S25_17030 PF13439 Glycosyltransferase Family 4 M1S25_17030 PF00534 Glycosyl transferases group 1 M1S25_17035 PF11818 C-terminal domain of tail specific protease (DUF3340) M1S25_17035 PF00595 PDZ domain M1S25_17035 PF03572 Peptidase family S41 M1S25_17035 PF17804 Tail specific protease N-terminal domain M1S25_17040 PF00933 Glycosyl hydrolase family 3 N terminal domain M1S25_17050 PF00561 alpha/beta hydrolase fold M1S25_17055 PF00171 Aldehyde dehydrogenase family M1S25_17060 PF00171 Aldehyde dehydrogenase family M1S25_17065 PF01202 Shikimate kinase M1S25_17070 PF02447 GntP family permease M1S25_17075 PF01081 KDPG and KHG aldolase M1S25_17080 PF00920 Dehydratase family M1S25_17085 PF00871 Acetokinase family M1S25_17090 PF07085 DRTGG domain M1S25_17090 PF01515 Phosphate acetyl/butaryl transferase M1S25_17095 PF05683 Fumarase C-terminus M1S25_17095 PF05681 Fumarate hydratase (Fumerase) M1S25_17110 PF07724 AAA domain (Cdc48 subfamily) M1S25_17110 PF10431 C-terminal, D2-small domain, of ClpB protein M1S25_17110 PF06689 ClpX C4-type zinc finger M1S25_17115 PF00574 Clp protease M1S25_17120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S25_17120 PF05698 Bacterial trigger factor protein (TF) C-terminus M1S25_17120 PF05697 Bacterial trigger factor protein (TF) M1S25_17125 PF07715 TonB-dependent Receptor Plug Domain M1S25_17125 PF00593 TonB dependent receptor M1S25_17130 PF18331 PKHD-type hydroxylase C-terminal domain M1S25_17130 PF13640 2OG-Fe(II) oxygenase superfamily M1S25_17135 PF00682 HMGL-like M1S25_17135 PF08502 LeuA allosteric (dimerisation) domain M1S25_17140 PF00561 alpha/beta hydrolase fold M1S25_17145 PF00561 alpha/beta hydrolase fold M1S25_17145 PF07021 Methionine biosynthesis protein MetW M1S25_17155 PF01725 Ham1 family M1S25_17165 PF02416 mttA/Hcf106 family M1S25_17170 PF02416 mttA/Hcf106 family M1S25_17175 PF00902 Sec-independent protein translocase protein (TatC) M1S25_17195 PF01790 Prolipoprotein diacylglyceryl transferase M1S25_17210 PF00303 Thymidylate synthase M1S25_17215 PF00186 Dihydrofolate reductase M1S25_17225 PF01625 Peptide methionine sulfoxide reductase M1S25_17235 PF01618 MotA/TolQ/ExbB proton channel family M1S25_17245 PF01842 ACT domain M1S25_17245 PF00551 Formyl transferase M1S25_17255 PF00171 Aldehyde dehydrogenase family M1S25_17260 PF00830 Ribosomal L28 family M1S25_17265 PF00471 Ribosomal protein L33 M1S25_17270 PF00999 Sodium/hydrogen exchanger family M1S25_17270 PF02254 TrkA-N domain M1S25_17290 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) M1S25_17295 PF00580 UvrD/REP helicase N-terminal domain M1S25_17295 PF13361 UvrD-like helicase C-terminal domain M1S25_17310 PF01751 Toprim domain M1S25_17310 PF08272 Topoisomerase I zinc-ribbon-like M1S25_17310 PF01131 DNA topoisomerase M1S25_17310 PF01396 Topoisomerase DNA binding C4 zinc finger M1S25_17320 PF01638 HxlR-like helix-turn-helix M1S25_17325 PF08240 Alcohol dehydrogenase GroES-like domain M1S25_17325 PF00107 Zinc-binding dehydrogenase M1S25_17330 PF04102 SlyX M1S25_17335 PF00005 ABC transporter M1S25_17335 PF16326 ABC transporter C-terminal domain M1S25_17335 PF12848 ABC transporter M1S25_17340 PF01810 LysE type translocator M1S25_17345 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S25_17355 PF00375 Sodium:dicarboxylate symporter family M1S25_17365 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S25_17365 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S25_17385 PF01416 tRNA pseudouridine synthase M1S25_17395 PF01176 Translation initiation factor 1A / IF-1 M1S25_17410 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S25_17420 PF00694 Aconitase C-terminal domain M1S25_17425 PF00330 Aconitase family (aconitate hydratase) M1S25_17435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_17435 PF03466 LysR substrate binding domain M1S25_17455 PF00293 NUDIX domain M1S25_17460 PF05524 PEP-utilising enzyme, N-terminal M1S25_17460 PF00391 PEP-utilising enzyme, mobile domain M1S25_17460 PF02896 PEP-utilising enzyme, TIM barrel domain M1S25_17460 PF01590 GAF domain M1S25_17465 PF00141 Peroxidase M1S25_17470 PF12706 Beta-lactamase superfamily domain M1S25_17475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_17475 PF03466 LysR substrate binding domain M1S25_17485 PF02798 Glutathione S-transferase, N-terminal domain M1S25_17490 PF13280 WYL domain M1S25_17490 PF08279 HTH domain M1S25_17495 PF13419 Haloacid dehalogenase-like hydrolase M1S25_17500 PF01479 S4 domain M1S25_17500 PF00849 RNA pseudouridylate synthase M1S25_17505 PF12111 Polyribonucleotide phosphorylase C terminal M1S25_17505 PF10150 Ribonuclease E/G family M1S25_17505 PF00575 S1 RNA binding domain M1S25_17510 PF00501 AMP-binding enzyme M1S25_17510 PF13193 AMP-binding enzyme C-terminal domain M1S25_17525 PF03466 LysR substrate binding domain M1S25_17525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_17530 PF00106 short chain dehydrogenase M1S25_17535 PF06969 HemN C-terminal domain M1S25_17535 PF04055 Radical SAM superfamily M1S25_17545 PF01554 MatE M1S25_17550 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S25_17550 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_17550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_17555 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S25_17555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_17560 PF03109 ABC1 family M1S25_17565 PF01197 Ribosomal protein L31 M1S25_17580 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1S25_17600 PF03884 DNA gyrase inhibitor YacG M1S25_17605 PF00753 Metallo-beta-lactamase superfamily M1S25_17610 PF00762 Ferrochelatase M1S25_17620 PF01177 Asp/Glu/Hydantoin racemase M1S25_17635 PF01206 Sulfurtransferase TusA M1S25_17640 PF00571 CBS domain M1S25_17640 PF03471 Transporter associated domain M1S25_17645 PF00795 Carbon-nitrogen hydrolase M1S25_17650 PF01588 Putative tRNA binding domain M1S25_17660 PF07963 Prokaryotic N-terminal methylation motif M1S25_17660 PF08334 Type II secretion system (T2SS), protein G M1S25_17665 PF00482 Type II secretion system (T2SS), protein F M1S25_17670 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M1S25_17670 PF17764 3′ DNA-binding domain (3′BD) M1S25_17670 PF00271 Helicase conserved C-terminal domain M1S25_17670 PF18074 Primosomal protein N C-terminal domain M1S25_17670 PF00270 DEAD/DEAH box helicase M1S25_17675 PF02254 TrkA-N domain M1S25_17675 PF00999 Sodium/hydrogen exchanger family M1S25_17680 PF01430 Hsp33 protein M1S25_17690 PF01556 DnaJ C terminal domain M1S25_17690 PF00226 DnaJ domain M1S25_17700 PF01544 CorA-like Mg2+ transporter protein M1S25_17705 PF00013 KH domain M1S25_17705 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M1S25_17705 PF01138 3' exoribonuclease family, domain 1 M1S25_17705 PF03725 3' exoribonuclease family, domain 2 M1S25_17705 PF00575 S1 RNA binding domain M1S25_17710 PF00312 Ribosomal protein S15 M1S25_17715 PF00144 Beta-lactamase M1S25_17720 PF13538 UvrD-like helicase C-terminal domain M1S25_17725 PF00580 UvrD/REP helicase N-terminal domain M1S25_17725 PF12705 PD-(D/E)XK nuclease superfamily M1S25_17725 PF13361 UvrD-like helicase C-terminal domain M1S25_17730 PF17946 RecC C-terminal domain M1S25_17740 PF03976 Polyphosphate kinase 2 (PPK2) M1S25_17750 PF01209 ubiE/COQ5 methyltransferase family M1S25_17760 PF03109 ABC1 family M1S25_17765 PF01494 FAD binding domain M1S25_17770 PF01502 Phosphoribosyl-AMP cyclohydrolase M1S25_17785 PF13244 Domain of unknown function (DUF4040) M1S25_17785 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M1S25_17785 PF00361 Proton-conducting membrane transporter M1S25_17785 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S25_17790 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S25_17795 PF00361 Proton-conducting membrane transporter M1S25_17800 PF01899 Na+/H+ ion antiporter subunit M1S25_17805 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M1S25_17810 PF03334 Na+/H+ antiporter subunit M1S25_17815 PF02033 Ribosome-binding factor A M1S25_17820 PF08364 Bacterial translation initiation factor IF-2 associated region M1S25_17820 PF11987 Translation-initiation factor 2 M1S25_17820 PF00009 Elongation factor Tu GTP binding domain M1S25_17820 PF04760 Translation initiation factor IF-2, N-terminal region M1S25_17825 PF08529 NusA N-terminal domain M1S25_17825 PF13184 NusA-like KH domain M1S25_17825 PF00575 S1 RNA binding domain M1S25_17830 PF17384 RimP C-terminal SH3 domain M1S25_17830 PF02576 RimP N-terminal domain M1S25_17850 PF03840 Preprotein translocase SecG subunit M1S25_17855 PF00121 Triosephosphate isomerase M1S25_17860 PF00437 Type II/IV secretion system protein M1S25_17860 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S25_17865 PF00482 Type II secretion system (T2SS), protein F M1S25_17875 PF01478 Type IV leader peptidase family M1S25_17875 PF06750 Bacterial Peptidase A24 N-terminal domain M1S25_17880 PF01121 Dephospho-CoA kinase M1S25_17890 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S25_17890 PF00588 SpoU rRNA Methylase family M1S25_17895 PF06865 Pyrimidine/purine nucleoside phosphorylase M1S25_17905 PF02463 RecF/RecN/SMC N terminal domain M1S25_17910 PF02622 Uncharacterized ACR, COG1678 M1S25_17915 PF03652 Holliday junction resolvase M1S25_17920 PF13533 Biotin-lipoyl like M1S25_17945 PF02805 Metal binding domain of Ada M1S25_17945 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S25_17945 PF12833 Helix-turn-helix domain M1S25_17945 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S25_17950 PF01066 CDP-alcohol phosphatidyltransferase M1S25_17960 PF02151 UvrB/uvrC motif M1S25_17960 PF08459 UvrC Helix-hairpin-helix N-terminal M1S25_17960 PF01541 GIY-YIG catalytic domain M1S25_17980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S25_17980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S25_17980 PF00378 Enoyl-CoA hydratase/isomerase M1S25_17985 PF00108 Thiolase, N-terminal domain M1S25_17985 PF02803 Thiolase, C-terminal domain M1S25_18005 PF00376 MerR family regulatory protein M1S25_18005 PF09278 MerR, DNA binding M1S25_18015 PF01323 DSBA-like thioredoxin domain M1S25_18030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_18030 PF00183 Hsp90 protein M1S25_18045 PF13726 Na+-H+ antiporter family M1S25_18045 PF03553 Na+/H+ antiporter family M1S25_18050 PF00561 alpha/beta hydrolase fold M1S25_18070 PF05000 RNA polymerase Rpb1, domain 4 M1S25_18070 PF04983 RNA polymerase Rpb1, domain 3 M1S25_18070 PF00623 RNA polymerase Rpb1, domain 2 M1S25_18070 PF04997 RNA polymerase Rpb1, domain 1 M1S25_18070 PF04998 RNA polymerase Rpb1, domain 5 M1S25_18075 PF04563 RNA polymerase beta subunit M1S25_18075 PF04561 RNA polymerase Rpb2, domain 2 M1S25_18075 PF04565 RNA polymerase Rpb2, domain 3 M1S25_18075 PF10385 RNA polymerase beta subunit external 1 domain M1S25_18075 PF00562 RNA polymerase Rpb2, domain 6 M1S25_18075 PF04560 RNA polymerase Rpb2, domain 7 M1S25_18080 PF16320 Ribosomal protein L7/L12 dimerisation domain M1S25_18080 PF00542 Ribosomal protein L7/L12 C-terminal domain M1S25_18085 PF00466 Ribosomal protein L10 M1S25_18090 PF00687 Ribosomal protein L1p/L10e family M1S25_18095 PF00298 Ribosomal protein L11, RNA binding domain M1S25_18095 PF03946 Ribosomal protein L11, N-terminal domain M1S25_18100 PF00467 KOW motif M1S25_18100 PF02357 Transcription termination factor nusG M1S25_18105 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M1S25_18115 PF03143 Elongation factor Tu C-terminal domain M1S25_18115 PF03144 Elongation factor Tu domain 2 M1S25_18115 PF00009 Elongation factor Tu GTP binding domain M1S25_18140 PF00425 chorismate binding enzyme M1S25_18140 PF04715 Anthranilate synthase component I, N terminal region M1S25_18145 PF13419 Haloacid dehalogenase-like hydrolase M1S25_18150 PF00498 FHA domain M1S25_18150 PF12401 Protein of unknown function (DUF2662) M1S25_18155 PF03958 Bacterial type II/III secretion system short domain M1S25_18155 PF00263 Bacterial type II and III secretion system protein M1S25_18170 PF00816 H-NS histone family M1S25_18195 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M1S25_18195 PF03900 Porphobilinogen deaminase, C-terminal domain M1S25_18200 PF04397 LytTr DNA-binding domain M1S25_18200 PF00072 Response regulator receiver domain M1S25_18205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_18205 PF06580 Histidine kinase M1S25_18205 PF07694 5TMR of 5TMR-LYT M1S25_18210 PF14698 Argininosuccinate lyase C-terminal M1S25_18210 PF00206 Lyase M1S25_18215 PF04362 Bacterial Fe(2+) trafficking M1S25_18220 PF01895 PhoU domain M1S25_18225 PF02321 Outer membrane efflux protein M1S25_18230 PF00892 EamA-like transporter family M1S25_18245 PF01964 Radical SAM ThiC family M1S25_18245 PF13667 ThiC-associated domain M1S25_18250 PF00293 NUDIX domain M1S25_18255 PF00149 Calcineurin-like phosphoesterase M1S25_18260 PF01258 Prokaryotic dksA/traR C4-type zinc finger M1S25_18265 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S25_18270 PF01098 Cell cycle protein M1S25_18275 PF02875 Mur ligase family, glutamate ligase domain M1S25_18275 PF08245 Mur ligase middle domain M1S25_18285 PF07664 Ferrous iron transport protein B C terminus M1S25_18285 PF02421 Ferrous iron transport protein B M1S25_18285 PF07670 Nucleoside recognition M1S25_18295 PF00589 Phage integrase family M1S25_18295 PF02899 Phage integrase, N-terminal SAM-like domain M1S25_18300 PF10411 Disulfide bond isomerase protein N-terminus M1S25_18300 PF13098 Thioredoxin-like domain M1S25_18305 PF01842 ACT domain M1S25_18305 PF00742 Homoserine dehydrogenase M1S25_18305 PF03447 Homoserine dehydrogenase, NAD binding domain M1S25_18310 PF00291 Pyridoxal-phosphate dependent enzyme M1S25_18315 PF00768 D-alanyl-D-alanine carboxypeptidase M1S25_18320 PF00196 Bacterial regulatory proteins, luxR family M1S25_18320 PF00072 Response regulator receiver domain M1S25_18325 PF00512 His Kinase A (phospho-acceptor) domain M1S25_18325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S25_18330 PF02954 Bacterial regulatory protein, Fis family M1S25_18330 PF00072 Response regulator receiver domain M1S25_18330 PF00158 Sigma-54 interaction domain M1S25_18335 PF00595 PDZ domain M1S25_18335 PF03572 Peptidase family S41 M1S25_18340 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M1S25_18340 PF01676 Metalloenzyme superfamily M1S25_18345 PF03739 Lipopolysaccharide export system permease LptF/LptG M1S25_18355 PF00883 Cytosol aminopeptidase family, catalytic domain M1S25_18355 PF02789 Cytosol aminopeptidase family, N-terminal domain M1S25_18375 PF00677 Lumazine binding domain M1S25_18385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S25_18385 PF01872 RibD C-terminal domain M1S25_18390 PF03477 ATP cone domain M1S25_18395 PF00909 Ammonium Transporter Family M1S25_18400 PF00543 Nitrogen regulatory protein P-II M1S25_18420 PF01636 Phosphotransferase enzyme family M1S25_18425 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M1S25_18445 PF00440 Bacterial regulatory proteins, tetR family M1S25_18445 PF02909 Tetracyclin repressor-like, C-terminal domain M1S25_18450 PF07690 Major Facilitator Superfamily M1S25_18460 PF01740 STAS domain M1S25_18460 PF00916 Sulfate permease family M1S25_18465 PF00582 Universal stress protein family M1S25_18495 PF00665 Integrase core domain M1S25_18505 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S25_18505 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S25_18505 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S25_18505 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S25_18510 PF00809 Pterin binding enzyme M1S25_18525 PF00665 Integrase core domain M1S25_18550 PF02899 Phage integrase, N-terminal SAM-like domain M1S25_18550 PF00589 Phage integrase family M1S25_18580 PF01740 STAS domain M1S25_18580 PF00916 Sulfate permease family M1S25_18585 PF00582 Universal stress protein family M1S25_18620 PF00155 Aminotransferase class I and II M1S25_18620 PF00392 Bacterial regulatory proteins, gntR family M1S25_18630 PF00701 Dihydrodipicolinate synthetase family M1S25_18645 PF03573 outer membrane porin, OprD family M1S25_18650 PF00719 Inorganic pyrophosphatase M1S25_18665 PF13193 AMP-binding enzyme C-terminal domain M1S25_18665 PF00501 AMP-binding enzyme M1S25_18670 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S25_18670 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S25_18675 PF07690 Major Facilitator Superfamily M1S25_18680 PF03458 UPF0126 domain M1S25_18685 PF02810 SEC-C motif M1S25_18690 PF03741 Integral membrane protein TerC family M1S25_18690 PF03471 Transporter associated domain M1S25_18695 PF03641 Possible lysine decarboxylase M1S25_18700 PF07690 Major Facilitator Superfamily M1S25_18710 PF00817 impB/mucB/samB family M1S25_18710 PF11799 impB/mucB/samB family C-terminal domain M1S25_18710 PF11798 IMS family HHH motif M1S25_18730 PF11842 Domain of unknown function (DUF3362) M1S25_18730 PF04055 Radical SAM superfamily M1S25_18730 PF08497 Radical SAM N-terminal M1S25_18750 PF03358 NADPH-dependent FMN reductase M1S25_18760 PF00291 Pyridoxal-phosphate dependent enzyme M1S25_18820 PF01327 Polypeptide deformylase M1S25_18830 PF02481 DNA recombination-mediator protein A M1S25_18830 PF17782 DprA winged helix domain M1S25_18835 PF01300 Telomere recombination M1S25_18840 PF00892 EamA-like transporter family M1S25_18845 PF00440 Bacterial regulatory proteins, tetR family M1S25_18850 PF07690 Major Facilitator Superfamily M1S25_18860 PF00255 Glutathione peroxidase M1S25_18870 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M1S25_18875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S25_18875 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S25_18880 PF00231 ATP synthase M1S25_18890 PF00213 ATP synthase delta (OSCP) subunit M1S25_18895 PF00430 ATP synthase B/B' CF(0) M1S25_18900 PF00137 ATP synthase subunit C M1S25_18905 PF00119 ATP synthase A chain M1S25_18925 PF00005 ABC transporter M1S25_18930 PF00950 ABC 3 transport family M1S25_18935 PF01810 LysE type translocator M1S25_18940 PF04261 Dyp-type peroxidase family M1S25_18950 PF00390 Malic enzyme, N-terminal domain M1S25_18950 PF03949 Malic enzyme, NAD binding domain M1S25_18955 PF03485 Arginyl tRNA synthetase N terminal domain M1S25_18955 PF05746 DALR anticodon binding domain M1S25_18955 PF00750 tRNA synthetases class I (R) M1S25_18975 PF02678 Pirin M1S25_18975 PF05726 Pirin C-terminal cupin domain M1S25_18985 PF03551 Transcriptional regulator PadR-like family M1S25_18990 PF13427 Domain of unknown function (DUF4111) M1S25_18990 PF01909 Nucleotidyltransferase domain M1S25_18995 PF00117 Glutamine amidotransferase class-I M1S25_18995 PF00958 GMP synthase C terminal domain M1S25_18995 PF02540 NAD synthase M1S25_19000 PF04286 Protein of unknown function (DUF445) M1S25_19005 PF07681 DoxX M1S25_19010 PF09335 SNARE associated Golgi protein M1S25_19025 PF13614 AAA domain M1S25_19035 PF01722 BolA-like protein M1S25_19050 PF01648 4'-phosphopantetheinyl transferase superfamily M1S25_19055 PF12697 Alpha/beta hydrolase family M1S25_19075 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S25_19075 PF16197 Ketoacyl-synthetase C-terminal extension M1S25_19075 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S25_19075 PF00975 Thioesterase domain M1S25_19075 PF00550 Phosphopantetheine attachment site M1S25_19075 PF14765 Polyketide synthase dehydratase M1S25_19075 PF08242 Methyltransferase domain M1S25_19080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_19080 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_19080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_19085 PF00501 AMP-binding enzyme M1S25_19090 PF03472 Autoinducer binding domain M1S25_19090 PF00196 Bacterial regulatory proteins, luxR family M1S25_19100 PF00765 Autoinducer synthase M1S25_19105 PF00083 Sugar (and other) transporter M1S25_19105 PF07690 Major Facilitator Superfamily M1S25_19110 PF00378 Enoyl-CoA hydratase/isomerase M1S25_19115 PF00378 Enoyl-CoA hydratase/isomerase M1S25_19120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S25_19120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S25_19120 PF02770 Acyl-CoA dehydrogenase, middle domain M1S25_19125 PF00501 AMP-binding enzyme M1S25_19125 PF13193 AMP-binding enzyme C-terminal domain M1S25_19130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S25_19130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S25_19135 PF00171 Aldehyde dehydrogenase family M1S25_19145 PF00324 Amino acid permease M1S25_19150 PF00324 Amino acid permease M1S25_19155 PF01042 Endoribonuclease L-PSP M1S25_19160 PF00842 Alanine racemase, C-terminal domain M1S25_19160 PF01168 Alanine racemase, N-terminal domain M1S25_19165 PF01266 FAD dependent oxidoreductase M1S25_19170 PF01037 Lrp/AsnC ligand binding domain M1S25_19180 PF00593 TonB dependent receptor M1S25_19180 PF07715 TonB-dependent Receptor Plug Domain M1S25_19195 PF00849 RNA pseudouridylate synthase M1S25_19210 PF00440 Bacterial regulatory proteins, tetR family M1S25_19210 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S25_19220 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S25_19220 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S25_19255 PF00694 Aconitase C-terminal domain M1S25_19255 PF00330 Aconitase family (aconitate hydratase) M1S25_19260 PF00285 Citrate synthase, C-terminal domain M1S25_19270 PF07729 FCD domain M1S25_19270 PF00392 Bacterial regulatory proteins, gntR family M1S25_19280 PF00155 Aminotransferase class I and II M1S25_19285 PF01565 FAD binding domain M1S25_19285 PF09330 D-lactate dehydrogenase, membrane binding M1S25_19290 PF01070 FMN-dependent dehydrogenase M1S25_19295 PF07729 FCD domain M1S25_19295 PF00392 Bacterial regulatory proteins, gntR family M1S25_19300 PF02652 L-lactate permease M1S25_19305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S25_19305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S25_19305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S25_19305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S25_19310 PF16363 GDP-mannose 4,6 dehydratase M1S25_19315 PF00342 Phosphoglucose isomerase M1S25_19320 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S25_19320 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S25_19320 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S25_19325 PF00483 Nucleotidyl transferase M1S25_19330 PF02397 Bacterial sugar transferase M1S25_19335 PF00535 Glycosyl transferase family 2 M1S25_19365 PF08666 SAF domain M1S25_19365 PF03102 NeuB family M1S25_19380 PF02348 Cytidylyltransferase M1S25_19385 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M1S25_19390 PF02719 Polysaccharide biosynthesis protein M1S25_19395 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S25_19395 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S25_19395 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S25_19400 PF10531 SLBB domain M1S25_19400 PF02563 Polysaccharide biosynthesis/export protein M1S25_19400 PF18412 Outer-membrane lipoprotein Wza C-terminal domain M1S25_19405 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S25_19410 PF13807 G-rich domain on putative tyrosine kinase M1S25_19410 PF02706 Chain length determinant protein M1S25_19410 PF13614 AAA domain M1S25_19415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S25_19415 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S25_19420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S25_19420 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S25_19425 PF03023 Lipid II flippase MurJ M1S25_19430 PF01510 N-acetylmuramoyl-L-alanine amidase M1S25_19435 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M1S25_19435 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M1S25_19445 PF05506 Domain of unknown function (DUF756) M1S25_19445 PF04185 Phosphoesterase family M1S25_19455 PF01138 3' exoribonuclease family, domain 1 M1S25_19455 PF03725 3' exoribonuclease family, domain 2 M1S25_19460 PF00487 Fatty acid desaturase M1S25_19465 PF00175 Oxidoreductase NAD-binding domain M1S25_19470 PF00440 Bacterial regulatory proteins, tetR family M1S25_19475 PF08360 QacR-like protein, C-terminal region M1S25_19475 PF00440 Bacterial regulatory proteins, tetR family M1S25_19480 PF01323 DSBA-like thioredoxin domain M1S25_19490 PF13419 Haloacid dehalogenase-like hydrolase M1S25_19495 PF00106 short chain dehydrogenase M1S25_19510 PF00696 Amino acid kinase family M1S25_19510 PF00583 Acetyltransferase (GNAT) family M1S25_19515 PF09084 NMT1/THI5 like M1S25_19520 PF09084 NMT1/THI5 like M1S25_19525 PF00296 Luciferase-like monooxygenase M1S25_19530 PF00528 Binding-protein-dependent transport system inner membrane component M1S25_19535 PF00005 ABC transporter M1S25_19540 PF08362 YcdC-like protein, C-terminal region M1S25_19540 PF00440 Bacterial regulatory proteins, tetR family M1S25_19545 PF01048 Phosphorylase superfamily M1S25_19555 PF01687 Riboflavin kinase M1S25_19555 PF06574 FAD synthetase M1S25_19560 PF00133 tRNA synthetases class I (I, L, M and V) M1S25_19560 PF06827 Zinc finger found in FPG and IleRS M1S25_19560 PF08264 Anticodon-binding domain of tRNA M1S25_19565 PF01252 Signal peptidase (SPase) II M1S25_19570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S25_19610 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S25_19615 PF07859 alpha/beta hydrolase fold M1S25_19635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S25_19635 PF03466 LysR substrate binding domain M1S25_19640 PF01025 GrpE M1S25_19645 PF00012 Hsp70 protein M1S25_19665 PF13406 Transglycosylase SLT domain M1S25_19670 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M1S25_19670 PF02222 ATP-grasp domain M1S25_19675 PF00731 AIR carboxylase M1S25_19685 PF01225 Mur ligase family, catalytic domain M1S25_19685 PF08245 Mur ligase middle domain M1S25_19685 PF02875 Mur ligase family, glutamate ligase domain M1S25_19695 PF01569 PAP2 superfamily M1S25_19700 PF03741 Integral membrane protein TerC family M1S25_19710 PF03738 Glutathionylspermidine synthase preATP-grasp M1S25_19715 PF00355 Rieske [2Fe-2S] domain M1S25_19720 PF01979 Amidohydrolase family M1S25_19725 PF00156 Phosphoribosyl transferase domain M1S25_19735 PF10411 Disulfide bond isomerase protein N-terminus M1S25_19735 PF13098 Thioredoxin-like domain M1S25_19740 PF01545 Cation efflux family M1S25_19740 PF16916 Dimerisation domain of Zinc Transporter M1S25_19745 PF02583 Metal-sensitive transcriptional repressor M1S25_19750 PF01926 50S ribosome-binding GTPase M1S25_19750 PF12631 MnmE helical domain M1S25_19750 PF10396 GTP-binding protein TrmE N-terminus M1S25_19755 PF02096 60Kd inner membrane protein M1S25_19755 PF14849 YidC periplasmic domain M1S25_19760 PF01809 Putative membrane protein insertion efficiency factor M1S25_19765 PF00825 Ribonuclease P M1S25_19770 PF00468 Ribosomal protein L34 M1S25_19800 PF01807 CHC2 zinc finger M1S25_19800 PF08275 DNA primase catalytic core, N-terminal domain M1S25_19800 PF10410 DnaB-helicase binding domain of primase M1S25_19830 PF00625 Guanylate kinase M1S25_19845 PF07015 VirC1 protein M1S25_19855 PF00589 Phage integrase family M1S25_19855 PF02899 Phage integrase, N-terminal SAM-like domain M1S25_19890 PF02811 PHP domain M1S25_19890 PF14579 Helix-hairpin-helix motif M1S25_19890 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S25_19890 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S25_19900 PF02811 PHP domain M1S25_19900 PF14579 Helix-hairpin-helix motif M1S25_19900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S25_19900 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S25_19915 PF01612 3'-5' exonuclease M1S25_19915 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S25_19915 PF00476 DNA polymerase family A M1S25_19915 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S25_19920 PF00154 recA bacterial DNA recombination protein M1S25_19920 PF03161 LAGLIDADG DNA endonuclease family M1S25_19950 PF02463 RecF/RecN/SMC N terminal domain M1S25_19950 PF06470 SMC proteins Flexible Hinge Domain M1S25_19970 PF02867 Ribonucleotide reductase, barrel domain M1S25_19970 PF03477 ATP cone domain M1S25_19970 PF00317 Ribonucleotide reductase, all-alpha domain M1S25_19975 PF00268 Ribonucleotide reductase, small chain M1S25_20015 PF00929 Exonuclease M1S25_20050 PF13737 Transposase DDE domain M1S25_20060 PF00440 Bacterial regulatory proteins, tetR family M1S25_20060 PF16925 Tetracyclin repressor-like, C-terminal domain M1S25_20070 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S25_20080 PF00465 Iron-containing alcohol dehydrogenase M1S25_20095 PF00756 Putative esterase M1S25_20100 PF08240 Alcohol dehydrogenase GroES-like domain M1S25_20100 PF00107 Zinc-binding dehydrogenase M1S25_20105 PF02583 Metal-sensitive transcriptional repressor M1S25_20120 PF00107 Zinc-binding dehydrogenase M1S25_20120 PF08240 Alcohol dehydrogenase GroES-like domain M1S25_20120 PF13823 Alcohol dehydrogenase GroES-associated M1S25_20185 PF02216 B domain M1S25_20185 PF00746 LPXTG cell wall anchor motif M1S25_20185 PF01476 LysM domain M1S25_20185 PF03373 Octapeptide repeat M1S25_20185 PF04650 YSIRK type signal peptide M1S25_20200 PF02559 CarD-like/TRCF domain M1S25_20200 PF00270 DEAD/DEAH box helicase M1S25_20200 PF00271 Helicase conserved C-terminal domain M1S25_20200 PF03461 TRCF domain M1S25_20200 PF17757 UvrB interaction domain M1S25_20220 PF00005 ABC transporter M1S25_20220 PF09383 NIL domain