locus-tag class description M1S29_00005 PF00308 Bacterial dnaA protein M1S29_00005 PF08299 Bacterial dnaA protein helix-turn-helix M1S29_00005 PF11638 DnaA N-terminal domain M1S29_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S29_00010 PF02767 DNA polymerase III beta subunit, central domain M1S29_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S29_00015 PF02463 RecF/RecN/SMC N terminal domain M1S29_00020 PF00204 DNA gyrase B M1S29_00020 PF00986 DNA gyrase B subunit, carboxyl terminus M1S29_00020 PF18053 DNA gyrase B subunit insert domain M1S29_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_00020 PF01751 Toprim domain M1S29_00030 PF09335 SNARE associated Golgi protein M1S29_00035 PF00005 ABC transporter M1S29_00035 PF12848 ABC transporter M1S29_00055 PF01521 Iron-sulphur cluster biosynthesis M1S29_00060 PF00561 alpha/beta hydrolase fold M1S29_00065 PF03702 Anhydro-N-acetylmuramic acid kinase M1S29_00070 PF00579 tRNA synthetases class I (W and Y) M1S29_00110 PF00209 Sodium:neurotransmitter symporter family M1S29_00120 PF01189 16S rRNA methyltransferase RsmB/F M1S29_00120 PF01029 NusB family M1S29_00125 PF02911 Formyl transferase, C-terminal domain M1S29_00125 PF00551 Formyl transferase M1S29_00130 PF00920 Dehydratase family M1S29_00145 PF03466 LysR substrate binding domain M1S29_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_00150 PF00860 Permease family M1S29_00155 PF00311 Phosphoenolpyruvate carboxylase M1S29_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S29_00160 PF00440 Bacterial regulatory proteins, tetR family M1S29_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S29_00170 PF00873 AcrB/AcrD/AcrF family M1S29_00180 PF00226 DnaJ domain M1S29_00180 PF00684 DnaJ central domain M1S29_00180 PF01556 DnaJ C terminal domain M1S29_00190 PF01113 Dihydrodipicolinate reductase, N-terminus M1S29_00190 PF05173 Dihydrodipicolinate reductase, C-terminus M1S29_00200 PF07690 Major Facilitator Superfamily M1S29_00205 PF00248 Aldo/keto reductase family M1S29_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_00210 PF03466 LysR substrate binding domain M1S29_00225 PF00392 Bacterial regulatory proteins, gntR family M1S29_00225 PF00155 Aminotransferase class I and II M1S29_00230 PF08240 Alcohol dehydrogenase GroES-like domain M1S29_00230 PF00107 Zinc-binding dehydrogenase M1S29_00235 PF03352 Methyladenine glycosylase M1S29_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S29_00250 PF14815 NUDIX domain M1S29_00250 PF10576 Iron-sulfur binding domain of endonuclease III M1S29_00250 PF00633 Helix-hairpin-helix motif M1S29_00265 PF07043 Protein of unknown function (DUF1328) M1S29_00270 PF03692 Putative zinc- or iron-chelating domain M1S29_00275 PF07995 Glucose / Sorbosone dehydrogenase M1S29_00280 PF00004 ATPase family associated with various cellular activities (AAA) M1S29_00280 PF16193 AAA C-terminal domain M1S29_00280 PF12002 MgsA AAA+ ATPase C terminal M1S29_00285 PF01226 Formate/nitrite transporter M1S29_00295 PF01259 SAICAR synthetase M1S29_00305 PF00701 Dihydrodipicolinate synthetase family M1S29_00310 PF00857 Isochorismatase family M1S29_00315 PF01758 Sodium Bile acid symporter family M1S29_00320 PF01554 MatE M1S29_00325 PF04463 Protein of unknown function (DUF523) M1S29_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S29_00345 PF02798 Glutathione S-transferase, N-terminal domain M1S29_00345 PF14497 Glutathione S-transferase, C-terminal domain M1S29_00355 PF00324 Amino acid permease M1S29_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S29_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S29_00375 PF07702 UTRA domain M1S29_00375 PF00392 Bacterial regulatory proteins, gntR family M1S29_00380 PF05962 HutD M1S29_00385 PF17392 Urocanase C-terminal domain M1S29_00385 PF17391 Urocanase N-terminal domain M1S29_00385 PF01175 Urocanase Rossmann-like domain M1S29_00390 PF00221 Aromatic amino acid lyase M1S29_00395 PF00324 Amino acid permease M1S29_00400 PF01979 Amidohydrolase family M1S29_00405 PF00491 Arginase family M1S29_00420 PF01177 Asp/Glu/Hydantoin racemase M1S29_00425 PF01380 SIS domain M1S29_00430 PF00132 Bacterial transferase hexapeptide (six repeats) M1S29_00430 PF14602 Hexapeptide repeat of succinyl-transferase M1S29_00430 PF12804 MobA-like NTP transferase domain M1S29_00435 PF04608 Phosphatidylglycerophosphatase A M1S29_00440 PF02769 AIR synthase related protein, C-terminal domain M1S29_00440 PF00586 AIR synthase related protein, N-terminal domain M1S29_00445 PF01029 NusB family M1S29_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase M1S29_00455 PF00925 GTP cyclohydrolase II M1S29_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S29_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase M1S29_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S29_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M1S29_00490 PF00581 Rhodanese-like domain M1S29_00495 PF02666 Phosphatidylserine decarboxylase M1S29_00500 PF03069 Acetamidase/Formamidase family M1S29_00520 PF11808 Phosphate regulon sensor protein PhoR M1S29_00520 PF00989 PAS fold M1S29_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_00520 PF00512 His Kinase A (phospho-acceptor) domain M1S29_00525 PF00486 Transcriptional regulatory protein, C terminal M1S29_00525 PF00072 Response regulator receiver domain M1S29_00535 PF00106 short chain dehydrogenase M1S29_00540 PF01554 MatE M1S29_00545 PF00155 Aminotransferase class I and II M1S29_00550 PF04286 Protein of unknown function (DUF445) M1S29_00565 PF04262 Glutamate-cysteine ligase M1S29_00570 PF02600 Disulfide bond formation protein DsbB M1S29_00575 PF04717 Type VI secretion system, phage-baseplate injector M1S29_00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S29_00575 PF13296 Putative type VI secretion system Rhs element Vgr M1S29_00580 PF00877 NlpC/P60 family M1S29_00580 PF01476 LysM domain M1S29_00595 PF05728 Uncharacterised protein family (UPF0227) M1S29_00600 PF01751 Toprim domain M1S29_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_00600 PF00986 DNA gyrase B subunit, carboxyl terminus M1S29_00600 PF00204 DNA gyrase B M1S29_00605 PF00106 short chain dehydrogenase M1S29_00610 PF04115 Ureidoglycolate lyase M1S29_00615 PF03561 Allantoicase repeat M1S29_00620 PF01494 FAD binding domain M1S29_00630 PF00860 Permease family M1S29_00635 PF00576 HIUase/Transthyretin family M1S29_00665 PF11412 Disulphide bond corrector protein DsbC M1S29_00665 PF02683 Cytochrome C biogenesis protein transmembrane region M1S29_00670 PF00990 Diguanylate cyclase, GGDEF domain M1S29_00670 PF07694 5TMR of 5TMR-LYT M1S29_00675 PF07859 alpha/beta hydrolase fold M1S29_00685 PF03960 ArsC family M1S29_00690 PF03372 Endonuclease/Exonuclease/phosphatase family M1S29_00695 PF00156 Phosphoribosyl transferase domain M1S29_00700 PF00593 TonB dependent receptor M1S29_00700 PF07715 TonB-dependent Receptor Plug Domain M1S29_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M1S29_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M1S29_00715 PF03033 Glycosyltransferase family 28 N-terminal domain M1S29_00715 PF04101 Glycosyltransferase family 28 C-terminal domain M1S29_00720 PF08245 Mur ligase middle domain M1S29_00720 PF02875 Mur ligase family, glutamate ligase domain M1S29_00720 PF01225 Mur ligase family, catalytic domain M1S29_00725 PF07478 D-ala D-ala ligase C-terminus M1S29_00725 PF01820 D-ala D-ala ligase N-terminus M1S29_00730 PF08478 POTRA domain, FtsQ-type M1S29_00730 PF03799 Cell division protein FtsQ M1S29_00735 PF02491 SHS2 domain inserted in FTSA M1S29_00740 PF00091 Tubulin/FtsZ family, GTPase domain M1S29_00740 PF12327 FtsZ family, C-terminal domain M1S29_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M1S29_00755 PF01551 Peptidase family M23 M1S29_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain M1S29_00760 PF00456 Transketolase, thiamine diphosphate binding domain M1S29_00765 PF02817 e3 binding domain M1S29_00765 PF00364 Biotin-requiring enzyme M1S29_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S29_00775 PF01169 Uncharacterized protein family UPF0016 M1S29_00795 PF00258 Flavodoxin M1S29_00795 PF01613 Flavin reductase like domain M1S29_00800 PF03692 Putative zinc- or iron-chelating domain M1S29_00805 PF00478 IMP dehydrogenase / GMP reductase domain M1S29_00805 PF00571 CBS domain M1S29_00810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S29_00810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S29_00810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S29_00810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S29_00815 PF01243 Pyridoxamine 5'-phosphate oxidase M1S29_00815 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M1S29_00820 PF02272 DHHA1 domain M1S29_00820 PF01368 DHH family M1S29_00820 PF17768 RecJ OB domain M1S29_00840 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S29_00845 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M1S29_00850 PF04452 RNA methyltransferase M1S29_00855 PF00924 Mechanosensitive ion channel M1S29_00865 PF13193 AMP-binding enzyme C-terminal domain M1S29_00865 PF00501 AMP-binding enzyme M1S29_00865 PF16177 Acetyl-coenzyme A synthetase N-terminus M1S29_00870 PF00857 Isochorismatase family M1S29_00875 PF01037 Lrp/AsnC ligand binding domain M1S29_00880 PF00872 Transposase, Mutator family M1S29_00885 PF00296 Luciferase-like monooxygenase M1S29_00890 PF03358 NADPH-dependent FMN reductase M1S29_00895 PF00072 Response regulator receiver domain M1S29_00895 PF00196 Bacterial regulatory proteins, luxR family M1S29_00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_00905 PF00672 HAMP domain M1S29_00905 PF00072 Response regulator receiver domain M1S29_00905 PF00512 His Kinase A (phospho-acceptor) domain M1S29_00905 PF01627 Hpt domain M1S29_00910 PF04341 Protein of unknown function, DUF485 M1S29_00915 PF00474 Sodium:solute symporter family M1S29_00925 PF02028 BCCT, betaine/carnitine/choline family transporter M1S29_00935 PF00990 Diguanylate cyclase, GGDEF domain M1S29_00945 PF00005 ABC transporter M1S29_00945 PF17755 UvrA DNA-binding domain M1S29_00945 PF17760 UvrA interaction domain M1S29_00950 PF16925 Tetracyclin repressor-like, C-terminal domain M1S29_00950 PF00440 Bacterial regulatory proteins, tetR family M1S29_00955 PF08240 Alcohol dehydrogenase GroES-like domain M1S29_00955 PF00107 Zinc-binding dehydrogenase M1S29_00965 PF06942 GlpM protein M1S29_00970 PF08543 Phosphomethylpyrimidine kinase M1S29_00970 PF02581 Thiamine monophosphate synthase M1S29_00970 PF03070 TENA/THI-4/PQQC family M1S29_00980 PF07690 Major Facilitator Superfamily M1S29_00985 PF00436 Single-strand binding protein family M1S29_00995 PF03591 AzlC protein M1S29_01005 PF00324 Amino acid permease M1S29_01010 PF00392 Bacterial regulatory proteins, gntR family M1S29_01010 PF00155 Aminotransferase class I and II M1S29_01015 PF00202 Aminotransferase class-III M1S29_01020 PF00171 Aldehyde dehydrogenase family M1S29_01025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_01030 PF00857 Isochorismatase family M1S29_01035 PF02678 Pirin M1S29_01035 PF05726 Pirin C-terminal cupin domain M1S29_01040 PF01593 Flavin containing amine oxidoreductase M1S29_01060 PF07690 Major Facilitator Superfamily M1S29_01065 PF03466 LysR substrate binding domain M1S29_01065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_01085 PF00248 Aldo/keto reductase family M1S29_01090 PF12833 Helix-turn-helix domain M1S29_01090 PF02311 AraC-like ligand binding domain M1S29_01120 PF01638 HxlR-like helix-turn-helix M1S29_01125 PF02525 Flavodoxin-like fold M1S29_01150 PF02705 K+ potassium transporter M1S29_01175 PF00230 Major intrinsic protein M1S29_01190 PF00977 Histidine biosynthesis protein M1S29_01195 PF01636 Phosphotransferase enzyme family M1S29_01210 PF03992 Antibiotic biosynthesis monooxygenase M1S29_01225 PF00977 Histidine biosynthesis protein M1S29_01240 PF00117 Glutamine amidotransferase class-I M1S29_01245 PF00475 Imidazoleglycerol-phosphate dehydratase M1S29_01265 PF00583 Acetyltransferase (GNAT) family M1S29_01270 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M1S29_01270 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M1S29_01280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_01280 PF00672 HAMP domain M1S29_01280 PF00512 His Kinase A (phospho-acceptor) domain M1S29_01285 PF00486 Transcriptional regulatory protein, C terminal M1S29_01285 PF00072 Response regulator receiver domain M1S29_01290 PF00575 S1 RNA binding domain M1S29_01290 PF09371 Tex-like protein N-terminal domain M1S29_01290 PF16921 Tex protein YqgF-like domain M1S29_01290 PF17674 HHH domain M1S29_01295 PF00916 Sulfate permease family M1S29_01295 PF01740 STAS domain M1S29_01300 PF00106 short chain dehydrogenase M1S29_01305 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S29_01310 PF00005 ABC transporter M1S29_01310 PF12848 ABC transporter M1S29_01335 PF04191 Phospholipid methyltransferase M1S29_01355 PF00529 HlyD membrane-fusion protein of T1SS M1S29_01355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S29_01360 PF00873 AcrB/AcrD/AcrF family M1S29_01365 PF01545 Cation efflux family M1S29_01395 PF00324 Amino acid permease M1S29_01410 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S29_01425 PF01795 MraW methylase family M1S29_01435 PF03717 Penicillin-binding Protein dimerisation domain M1S29_01435 PF00905 Penicillin binding protein transpeptidase domain M1S29_01440 PF02875 Mur ligase family, glutamate ligase domain M1S29_01440 PF08245 Mur ligase middle domain M1S29_01440 PF01225 Mur ligase family, catalytic domain M1S29_01445 PF01225 Mur ligase family, catalytic domain M1S29_01445 PF02875 Mur ligase family, glutamate ligase domain M1S29_01445 PF08245 Mur ligase middle domain M1S29_01450 PF00953 Glycosyl transferase family 4 M1S29_01460 PF13847 Methyltransferase domain M1S29_01465 PF17092 Penicillin-binding protein OB-like domain M1S29_01465 PF00912 Transglycosylase M1S29_01465 PF00905 Penicillin binding protein transpeptidase domain M1S29_01470 PF11104 Type IV pilus assembly protein PilM; M1S29_01475 PF05137 Fimbrial assembly protein (PilN) M1S29_01480 PF04350 Pilus assembly protein, PilO M1S29_01490 PF11741 AMIN domain M1S29_01490 PF00263 Bacterial type II and III secretion system protein M1S29_01490 PF07660 Secretin and TonB N terminus short domain M1S29_01490 PF03958 Bacterial type II/III secretion system short domain M1S29_01495 PF01202 Shikimate kinase M1S29_01500 PF01761 3-dehydroquinate synthase M1S29_01510 PF01645 Conserved region in glutamate synthase M1S29_01510 PF01493 GXGXG motif M1S29_01510 PF00310 Glutamine amidotransferases class-II M1S29_01510 PF04898 Glutamate synthase central domain M1S29_01515 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M1S29_01515 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_01525 PF04011 LemA family M1S29_01530 PF04536 TPM domain M1S29_01540 PF07963 Prokaryotic N-terminal methylation motif M1S29_01540 PF00114 Pilin (bacterial filament) M1S29_01550 PF15864 Protein glycosylation ligase M1S29_01550 PF04932 O-Antigen ligase M1S29_01550 PF11846 Virulence factor membrane-bound polymerase, C-terminal M1S29_01555 PF00210 Ferritin-like domain M1S29_01560 PF04324 BFD-like [2Fe-2S] binding domain M1S29_01565 PF01042 Endoribonuclease L-PSP M1S29_01570 PF04607 Region found in RelA / SpoT proteins M1S29_01570 PF13291 ACT domain M1S29_01570 PF02824 TGS domain M1S29_01580 PF01192 RNA polymerase Rpb6 M1S29_01585 PF00625 Guanylate kinase M1S29_01590 PF02401 LytB protein M1S29_01630 PF00886 Ribosomal protein S16 M1S29_01635 PF01782 RimM N-terminal domain M1S29_01635 PF05239 PRC-barrel domain M1S29_01640 PF01746 tRNA (Guanine-1)-methyltransferase M1S29_01645 PF01245 Ribosomal protein L19 M1S29_01650 PF00561 alpha/beta hydrolase fold M1S29_01655 PF03280 Proteobacterial lipase chaperone protein M1S29_01660 PF09157 Pseudouridine synthase II TruB, C-terminal M1S29_01660 PF01509 TruB family pseudouridylate synthase (N terminal domain) M1S29_01660 PF16198 tRNA pseudouridylate synthase B C-terminal domain M1S29_01665 PF01925 Sulfite exporter TauE/SafE M1S29_01675 PF00892 EamA-like transporter family M1S29_01680 PF00892 EamA-like transporter family M1S29_01685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S29_01685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S29_01690 PF02913 FAD linked oxidases, C-terminal domain M1S29_01690 PF01565 FAD binding domain M1S29_01700 PF03992 Antibiotic biosynthesis monooxygenase M1S29_01705 PF02525 Flavodoxin-like fold M1S29_01715 PF07690 Major Facilitator Superfamily M1S29_01720 PF12805 FUSC-like inner membrane protein yccS M1S29_01725 PF00080 Copper/zinc superoxide dismutase (SODC) M1S29_01730 PF01594 AI-2E family transporter M1S29_01735 PF13614 AAA domain M1S29_01765 PF00324 Amino acid permease M1S29_01770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S29_01770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S29_01775 PF00202 Aminotransferase class-III M1S29_01780 PF04958 Arginine N-succinyltransferase beta subunit M1S29_01785 PF00171 Aldehyde dehydrogenase family M1S29_01790 PF04996 Succinylarginine dihydrolase M1S29_01795 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M1S29_01810 PF05922 Peptidase inhibitor I9 M1S29_01810 PF00082 Subtilase family M1S29_01825 PF03466 LysR substrate binding domain M1S29_01825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_01830 PF00892 EamA-like transporter family M1S29_01840 PF05746 DALR anticodon binding domain M1S29_01840 PF02092 Glycyl-tRNA synthetase beta subunit M1S29_01845 PF02091 Glycyl-tRNA synthetase alpha subunit M1S29_01870 PF00571 CBS domain M1S29_01875 PF04024 PspC domain M1S29_01885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_01885 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S29_01885 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_01885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_01895 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M1S29_01895 PF01488 Shikimate / quinate 5-dehydrogenase M1S29_01895 PF08501 Shikimate dehydrogenase substrate binding domain M1S29_01900 PF01218 Coproporphyrinogen III oxidase M1S29_01905 PF00925 GTP cyclohydrolase II M1S29_01910 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M1S29_01910 PF02779 Transketolase, pyrimidine binding domain M1S29_01910 PF02780 Transketolase, C-terminal domain M1S29_01915 PF00459 Inositol monophosphatase family M1S29_01920 PF03880 DbpA RNA binding domain M1S29_01920 PF00270 DEAD/DEAH box helicase M1S29_01920 PF12343 Cold shock protein DEAD box A M1S29_01920 PF00271 Helicase conserved C-terminal domain M1S29_01930 PF00005 ABC transporter M1S29_01935 PF02405 Permease MlaE M1S29_01945 PF05494 MlaC protein M1S29_01955 PF01544 CorA-like Mg2+ transporter protein M1S29_01960 PF03641 Possible lysine decarboxylase M1S29_01965 PF00293 NUDIX domain M1S29_01970 PF00156 Phosphoribosyl transferase domain M1S29_01975 PF00270 DEAD/DEAH box helicase M1S29_01975 PF00271 Helicase conserved C-terminal domain M1S29_01975 PF17191 RecG wedge domain M1S29_01990 PF01553 Acyltransferase M1S29_02000 PF00375 Sodium:dicarboxylate symporter family M1S29_02010 PF01926 50S ribosome-binding GTPase M1S29_02015 PF02082 Transcriptional regulator M1S29_02020 PF00042 Globin M1S29_02020 PF00970 Oxidoreductase FAD-binding domain M1S29_02020 PF00175 Oxidoreductase NAD-binding domain M1S29_02025 PF05872 Bacterial protein of unknown function (DUF853) M1S29_02030 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S29_02035 PF00117 Glutamine amidotransferase class-I M1S29_02040 PF00338 Ribosomal protein S10p/S20e M1S29_02045 PF00297 Ribosomal protein L3 M1S29_02050 PF00573 Ribosomal protein L4/L1 family M1S29_02055 PF00276 Ribosomal protein L23 M1S29_02060 PF00181 Ribosomal Proteins L2, RNA binding domain M1S29_02060 PF03947 Ribosomal Proteins L2, C-terminal domain M1S29_02065 PF00203 Ribosomal protein S19 M1S29_02070 PF00237 Ribosomal protein L22p/L17e M1S29_02080 PF00252 Ribosomal protein L16p/L10e M1S29_02085 PF00831 Ribosomal L29 protein M1S29_02090 PF00366 Ribosomal protein S17 M1S29_02095 PF00238 Ribosomal protein L14p/L23e M1S29_02100 PF00467 KOW motif M1S29_02100 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M1S29_02105 PF00673 ribosomal L5P family C-terminus M1S29_02105 PF00281 Ribosomal protein L5 M1S29_02110 PF00253 Ribosomal protein S14p/S29e M1S29_02115 PF00410 Ribosomal protein S8 M1S29_02120 PF00347 Ribosomal protein L6 M1S29_02125 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M1S29_02130 PF03719 Ribosomal protein S5, C-terminal domain M1S29_02130 PF00333 Ribosomal protein S5, N-terminal domain M1S29_02135 PF00327 Ribosomal protein L30p/L7e M1S29_02140 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M1S29_02145 PF00344 SecY translocase M1S29_02150 PF00444 Ribosomal protein L36 M1S29_02155 PF00416 Ribosomal protein S13/S18 M1S29_02160 PF00411 Ribosomal protein S11 M1S29_02165 PF00163 Ribosomal protein S4/S9 N-terminal domain M1S29_02165 PF01479 S4 domain M1S29_02170 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M1S29_02170 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M1S29_02170 PF01000 RNA polymerase Rpb3/RpoA insert domain M1S29_02175 PF01196 Ribosomal protein L17 M1S29_02180 PF00743 Flavin-binding monooxygenase-like M1S29_02185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_02185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_02185 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_02190 PF03937 Flavinator of succinate dehydrogenase M1S29_02220 PF09526 Probable metal-binding protein (DUF2387) M1S29_02225 PF01432 Peptidase family M3 M1S29_02230 PF17876 Cold shock domain M1S29_02230 PF00575 S1 RNA binding domain M1S29_02230 PF08461 Ribonuclease R winged-helix domain M1S29_02230 PF08206 Ribonuclease B OB domain M1S29_02230 PF00773 RNB domain M1S29_02275 PF01557 Fumarylacetoacetate (FAA) hydrolase family M1S29_02280 PF12833 Helix-turn-helix domain M1S29_02285 PF00892 EamA-like transporter family M1S29_02290 PF03631 Virulence factor BrkB M1S29_02295 PF03358 NADPH-dependent FMN reductase M1S29_02320 PF02130 Uncharacterized protein family UPF0054 M1S29_02325 PF02562 PhoH-like protein M1S29_02330 PF04055 Radical SAM superfamily M1S29_02330 PF01938 TRAM domain M1S29_02330 PF00919 Uncharacterized protein family UPF0004 M1S29_02335 PF10145 Phage-related minor tail protein M1S29_02335 PF01464 Transglycosylase SLT domain M1S29_02335 PF01551 Peptidase family M23 M1S29_02345 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1S29_02345 PF00056 lactate/malate dehydrogenase, NAD binding domain M1S29_02365 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M1S29_02370 PF01066 CDP-alcohol phosphatidyltransferase M1S29_02415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_02415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_02415 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_02420 PF17932 Tetracyclin repressor-like, C-terminal domain M1S29_02420 PF00440 Bacterial regulatory proteins, tetR family M1S29_02435 PF01039 Carboxyl transferase domain M1S29_02440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_02440 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_02440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_02450 PF02785 Biotin carboxylase C-terminal domain M1S29_02450 PF00289 Biotin carboxylase, N-terminal domain M1S29_02450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S29_02450 PF00364 Biotin-requiring enzyme M1S29_02460 PF04386 Stringent starvation protein B M1S29_02465 PF00043 Glutathione S-transferase, C-terminal domain M1S29_02465 PF13417 Glutathione S-transferase, N-terminal domain M1S29_02470 PF00380 Ribosomal protein S9/S16 M1S29_02475 PF00572 Ribosomal protein L13 M1S29_02480 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M1S29_02485 PF00398 Ribosomal RNA adenine dimethylase M1S29_02490 PF00149 Calcineurin-like phosphoesterase M1S29_02510 PF13167 GTP-binding GTPase N-terminal M1S29_02510 PF01926 50S ribosome-binding GTPase M1S29_02510 PF16360 GTP-binding GTPase Middle Region M1S29_02520 PF13091 PLD-like domain M1S29_02525 PF10518 TAT (twin-arginine translocation) pathway signal sequence M1S29_02525 PF00149 Calcineurin-like phosphoesterase M1S29_02530 PF01389 OmpA-like transmembrane domain M1S29_02530 PF00691 OmpA family M1S29_02535 PF00990 Diguanylate cyclase, GGDEF domain M1S29_02535 PF17152 Periplasmic sensor domain M1S29_02570 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_02570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S29_02580 PF04273 Putative phosphatase (DUF442) M1S29_02580 PF00753 Metallo-beta-lactamase superfamily M1S29_02585 PF00561 alpha/beta hydrolase fold M1S29_02590 PF00085 Thioredoxin M1S29_02595 PF03061 Thioesterase superfamily M1S29_02605 PF04461 Protein of unknown function (DUF520) M1S29_02615 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S29_02615 PF01266 FAD dependent oxidoreductase M1S29_02625 PF03795 YCII-related domain M1S29_02630 PF04279 Intracellular septation protein A M1S29_02635 PF02811 PHP domain M1S29_02640 PF01062 Bestrophin, RFP-TM, chloride channel M1S29_02645 PF04002 RadC-like JAB domain M1S29_02650 PF04127 DNA / pantothenate metabolism flavoprotein M1S29_02650 PF02441 Flavoprotein M1S29_02655 PF07549 SecD/SecF GG Motif M1S29_02655 PF02355 Protein export membrane protein M1S29_02660 PF07549 SecD/SecF GG Motif M1S29_02660 PF13721 SecD export protein N-terminal TM region M1S29_02660 PF02355 Protein export membrane protein M1S29_02665 PF02699 Preprotein translocase subunit M1S29_02670 PF01702 Queuine tRNA-ribosyltransferase M1S29_02685 PF02547 Queuosine biosynthesis protein M1S29_02715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_02715 PF07689 KaiB domain M1S29_02715 PF00512 His Kinase A (phospho-acceptor) domain M1S29_02720 PF03710 Glutamate-ammonia ligase adenylyltransferase M1S29_02720 PF08335 GlnD PII-uridylyltransferase M1S29_02725 PF01063 Amino-transferase class IV M1S29_02740 PF01522 Polysaccharide deacetylase M1S29_02745 PF00535 Glycosyl transferase family 2 M1S29_02750 PF13439 Glycosyltransferase Family 4 M1S29_02750 PF00534 Glycosyl transferases group 1 M1S29_02775 PF17101 Stealth protein CR1, conserved region 1 M1S29_02775 PF17102 Stealth protein CR3, conserved region 3 M1S29_02775 PF11380 Stealth protein CR2, conserved region 2 M1S29_02780 PF02938 GAD domain M1S29_02780 PF00152 tRNA synthetases class II (D, K and N) M1S29_02780 PF01336 OB-fold nucleic acid binding domain M1S29_02790 PF07715 TonB-dependent Receptor Plug Domain M1S29_02790 PF00593 TonB dependent receptor M1S29_02810 PF06146 Phosphate-starvation-inducible E M1S29_02815 PF02798 Glutathione S-transferase, N-terminal domain M1S29_02815 PF00043 Glutathione S-transferase, C-terminal domain M1S29_02820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_02820 PF03466 LysR substrate binding domain M1S29_02825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_02825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_02825 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_02825 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S29_02830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_02830 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_02830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_02830 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S29_02840 PF00672 HAMP domain M1S29_02840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_02840 PF00512 His Kinase A (phospho-acceptor) domain M1S29_02845 PF00072 Response regulator receiver domain M1S29_02845 PF00486 Transcriptional regulatory protein, C terminal M1S29_02850 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M1S29_02870 PF01923 Cobalamin adenosyltransferase M1S29_02875 PF00593 TonB dependent receptor M1S29_02875 PF07715 TonB-dependent Receptor Plug Domain M1S29_02880 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M1S29_02885 PF00291 Pyridoxal-phosphate dependent enzyme M1S29_02910 PF00290 Tryptophan synthase alpha chain M1S29_02915 PF01039 Carboxyl transferase domain M1S29_02920 PF08245 Mur ligase middle domain M1S29_02920 PF02875 Mur ligase family, glutamate ligase domain M1S29_02935 PF00753 Metallo-beta-lactamase superfamily M1S29_02940 PF00578 AhpC/TSA family M1S29_02940 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S29_02945 PF07516 SecA Wing and Scaffold domain M1S29_02945 PF02810 SEC-C motif M1S29_02945 PF07517 SecA DEAD-like domain M1S29_02945 PF01043 SecA preprotein cross-linking domain M1S29_02955 PF07690 Major Facilitator Superfamily M1S29_02955 PF00083 Sugar (and other) transporter M1S29_02960 PF03006 Haemolysin-III related M1S29_02985 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S29_02985 PF00378 Enoyl-CoA hydratase/isomerase M1S29_02985 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S29_02990 PF02803 Thiolase, C-terminal domain M1S29_02990 PF00108 Thiolase, N-terminal domain M1S29_02995 PF02311 AraC-like ligand binding domain M1S29_02995 PF12833 Helix-turn-helix domain M1S29_03000 PF02515 CoA-transferase family III M1S29_03005 PF04966 Carbohydrate-selective porin, OprB family M1S29_03010 PF01011 PQQ enzyme repeat M1S29_03015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S29_03015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S29_03025 PF00893 Small Multidrug Resistance protein M1S29_03035 PF00108 Thiolase, N-terminal domain M1S29_03035 PF02803 Thiolase, C-terminal domain M1S29_03045 PF13505 Outer membrane protein beta-barrel domain M1S29_03045 PF00691 OmpA family M1S29_03055 PF01139 tRNA-splicing ligase RtcB M1S29_03060 PF00324 Amino acid permease M1S29_03065 PF05175 Methyltransferase small domain M1S29_03065 PF08468 Methyltransferase small domain N-terminal M1S29_03070 PF00860 Permease family M1S29_03075 PF03144 Elongation factor Tu domain 2 M1S29_03075 PF00009 Elongation factor Tu GTP binding domain M1S29_03075 PF00679 Elongation factor G C-terminus M1S29_03080 PF01741 Large-conductance mechanosensitive channel, MscL M1S29_03095 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M1S29_03095 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M1S29_03095 PF06827 Zinc finger found in FPG and IleRS M1S29_03100 PF02245 Methylpurine-DNA glycosylase (MPG) M1S29_03120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S29_03135 PF10411 Disulfide bond isomerase protein N-terminus M1S29_03135 PF13098 Thioredoxin-like domain M1S29_03140 PF01571 Aminomethyltransferase folate-binding domain M1S29_03150 PF04343 Protein of unknown function, DUF488 M1S29_03155 PF08274 PhnA Zinc-Ribbon M1S29_03155 PF03831 PhnA domain M1S29_03160 PF07411 Domain of unknown function (DUF1508) M1S29_03165 PF03129 Anticodon binding domain M1S29_03165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S29_03165 PF04073 Aminoacyl-tRNA editing domain M1S29_03170 PF00873 AcrB/AcrD/AcrF family M1S29_03185 PF00072 Response regulator receiver domain M1S29_03190 PF00072 Response regulator receiver domain M1S29_03195 PF01584 CheW-like domain M1S29_03200 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M1S29_03200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M1S29_03205 PF00072 Response regulator receiver domain M1S29_03205 PF01627 Hpt domain M1S29_03205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_03205 PF01584 CheW-like domain M1S29_03215 PF07687 Peptidase dimerisation domain M1S29_03215 PF01546 Peptidase family M20/M25/M40 M1S29_03220 PF08085 Entericidin EcnA/B family M1S29_03230 PF04304 Protein of unknown function (DUF454) M1S29_03235 PF03734 L,D-transpeptidase catalytic domain M1S29_03235 PF17969 L,D-transpeptidase C-terminal domain M1S29_03275 PF00667 FAD binding domain M1S29_03275 PF00258 Flavodoxin M1S29_03275 PF00175 Oxidoreductase NAD-binding domain M1S29_03285 PF12805 FUSC-like inner membrane protein yccS M1S29_03290 PF07690 Major Facilitator Superfamily M1S29_03295 PF00881 Nitroreductase family M1S29_03310 PF01235 Sodium:alanine symporter family M1S29_03315 PF01734 Patatin-like phospholipase M1S29_03320 PF13291 ACT domain M1S29_03320 PF00291 Pyridoxal-phosphate dependent enzyme M1S29_03325 PF05992 SbmA/BacA-like family M1S29_03355 PF02934 GatB/GatE catalytic domain M1S29_03355 PF02637 GatB domain M1S29_03360 PF01425 Amidase M1S29_03365 PF02686 Glu-tRNAGln amidotransferase C subunit M1S29_03375 PF04085 rod shape-determining protein MreC M1S29_03380 PF04093 rod shape-determining protein MreD M1S29_03385 PF02545 Maf-like protein M1S29_03390 PF00575 S1 RNA binding domain M1S29_03390 PF10150 Ribonuclease E/G family M1S29_03400 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain M1S29_03400 PF06974 Protein of unknown function (DUF1298) M1S29_03405 PF01507 Phosphoadenosine phosphosulfate reductase family M1S29_03420 PF02525 Flavodoxin-like fold M1S29_03440 PF02673 Bacitracin resistance protein BacA M1S29_03445 PF06719 AraC-type transcriptional regulator N-terminus M1S29_03445 PF12833 Helix-turn-helix domain M1S29_03450 PF08240 Alcohol dehydrogenase GroES-like domain M1S29_03450 PF14765 Polyketide synthase dehydratase M1S29_03450 PF00550 Phosphopantetheine attachment site M1S29_03450 PF08659 KR domain M1S29_03450 PF00698 Acyl transferase domain M1S29_03450 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S29_03450 PF16197 Ketoacyl-synthetase C-terminal extension M1S29_03450 PF09277 Erythronolide synthase, docking M1S29_03450 PF08990 Erythronolide synthase docking M1S29_03450 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S29_03455 PF01965 DJ-1/PfpI family M1S29_03465 PF00324 Amino acid permease M1S29_03470 PF04303 PrpF protein M1S29_03475 PF00348 Polyprenyl synthetase M1S29_03480 PF04237 YjbR M1S29_03485 PF01145 SPFH domain / Band 7 family M1S29_03495 PF01734 Patatin-like phospholipase M1S29_03520 PF00072 Response regulator receiver domain M1S29_03520 PF00486 Transcriptional regulatory protein, C terminal M1S29_03525 PF08521 Two-component sensor kinase N-terminal M1S29_03525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_03525 PF00512 His Kinase A (phospho-acceptor) domain M1S29_03535 PF00909 Ammonium Transporter Family M1S29_03540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_03540 PF03466 LysR substrate binding domain M1S29_03560 PF10458 Valyl tRNA synthetase tRNA binding arm M1S29_03560 PF00133 tRNA synthetases class I (I, L, M and V) M1S29_03560 PF08264 Anticodon-binding domain of tRNA M1S29_03580 PF01906 Putative heavy-metal-binding M1S29_03585 PF01906 Putative heavy-metal-binding M1S29_03590 PF02321 Outer membrane efflux protein M1S29_03595 PF00873 AcrB/AcrD/AcrF family M1S29_03600 PF00529 HlyD membrane-fusion protein of T1SS M1S29_03600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S29_03605 PF01569 PAP2 superfamily M1S29_03615 PF00348 Polyprenyl synthetase M1S29_03625 PF00829 Ribosomal prokaryotic L21 protein M1S29_03630 PF01016 Ribosomal L27 protein M1S29_03635 PF03548 Outer membrane lipoprotein carrier protein LolA M1S29_03645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S29_03645 PF02403 Seryl-tRNA synthetase N-terminal domain M1S29_03650 PF10414 Sirohaem synthase dimerisation region M1S29_03650 PF14824 Sirohaem biosynthesis protein central M1S29_03650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S29_03655 PF00588 SpoU rRNA Methylase family M1S29_03660 PF01638 HxlR-like helix-turn-helix M1S29_03665 PF03358 NADPH-dependent FMN reductase M1S29_03670 PF13520 Amino acid permease M1S29_03675 PF00465 Iron-containing alcohol dehydrogenase M1S29_03685 PF03099 Biotin/lipoate A/B protein ligase family M1S29_03690 PF04359 Protein of unknown function (DUF493) M1S29_03695 PF03979 Sigma-70 factor, region 1.1 M1S29_03695 PF04545 Sigma-70, region 4 M1S29_03695 PF04539 Sigma-70 region 3 M1S29_03695 PF04542 Sigma-70 region 2 M1S29_03695 PF00140 Sigma-70 factor, region 1.2 M1S29_03695 PF04546 Sigma-70, non-essential region M1S29_03715 PF00581 Rhodanese-like domain M1S29_03715 PF17773 UPF0176 acylphosphatase like domain M1S29_03725 PF00285 Citrate synthase, C-terminal domain M1S29_03730 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S29_03735 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S29_03740 PF00890 FAD binding domain M1S29_03740 PF02910 Fumarate reductase flavoprotein C-term M1S29_03745 PF13085 2Fe-2S iron-sulfur cluster binding domain M1S29_03765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S29_03765 PF00364 Biotin-requiring enzyme M1S29_03765 PF02817 e3 binding domain M1S29_03770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S29_03770 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_03775 PF08442 ATP-grasp domain M1S29_03775 PF00549 CoA-ligase M1S29_03780 PF02629 CoA binding domain M1S29_03780 PF00549 CoA-ligase M1S29_03785 PF00579 tRNA synthetases class I (W and Y) M1S29_03790 PF05661 Protein of unknown function (DUF808) M1S29_03795 PF04228 Putative neutral zinc metallopeptidase M1S29_03800 PF00999 Sodium/hydrogen exchanger family M1S29_03815 PF09587 Bacterial capsule synthesis protein PGA_cap M1S29_03825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S29_03830 PF00582 Universal stress protein family M1S29_03835 PF00132 Bacterial transferase hexapeptide (six repeats) M1S29_03840 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S29_03840 PF03449 Transcription elongation factor, N-terminal M1S29_03845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S29_03845 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M1S29_03845 PF02142 MGS-like domain M1S29_03850 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M1S29_03850 PF00117 Glutamine amidotransferase class-I M1S29_03865 PF01985 CRS1 / YhbY (CRM) domain M1S29_03870 PF01728 FtsJ-like methyltransferase M1S29_03875 PF01434 Peptidase family M41 M1S29_03875 PF06480 FtsH Extracellular M1S29_03875 PF00004 ATPase family associated with various cellular activities (AAA) M1S29_03875 PF17862 AAA+ lid domain M1S29_03880 PF00809 Pterin binding enzyme M1S29_03900 PF09423 PhoD-like phosphatase M1S29_03900 PF16655 PhoD-like phosphatase, N-terminal domain M1S29_03915 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M1S29_03915 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M1S29_03930 PF00083 Sugar (and other) transporter M1S29_03935 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1S29_03935 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1S29_03940 PF01266 FAD dependent oxidoreductase M1S29_03940 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M1S29_03945 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1S29_03945 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1S29_03950 PF00781 Diacylglycerol kinase catalytic domain M1S29_03955 PF00149 Calcineurin-like phosphoesterase M1S29_03965 PF00166 Chaperonin 10 Kd subunit M1S29_03970 PF00118 TCP-1/cpn60 chaperonin family M1S29_03975 PF01219 Prokaryotic diacylglycerol kinase M1S29_03980 PF00753 Metallo-beta-lactamase superfamily M1S29_03985 PF03009 Glycerophosphoryl diester phosphodiesterase family M1S29_03990 PF00873 AcrB/AcrD/AcrF family M1S29_04000 PF01435 Peptidase family M48 M1S29_04005 PF01464 Transglycosylase SLT domain M1S29_04010 PF01171 PP-loop family M1S29_04020 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S29_04020 PF01464 Transglycosylase SLT domain M1S29_04025 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S29_04025 PF03449 Transcription elongation factor, N-terminal M1S29_04040 PF00668 Condensation domain M1S29_04040 PF13193 AMP-binding enzyme C-terminal domain M1S29_04040 PF00975 Thioesterase domain M1S29_04040 PF00550 Phosphopantetheine attachment site M1S29_04040 PF00501 AMP-binding enzyme M1S29_04070 PF00881 Nitroreductase family M1S29_04085 PF02595 Glycerate kinase family M1S29_04090 PF00384 Molybdopterin oxidoreductase M1S29_04095 PF02634 FdhD/NarQ family M1S29_04100 PF06803 Protein of unknown function (DUF1232) M1S29_04105 PF11890 Domain of unknown function (DUF3410) M1S29_04105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S29_04105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S29_04110 PF00152 tRNA synthetases class II (D, K and N) M1S29_04120 PF18073 Rubredoxin metal binding domain M1S29_04125 PF00324 Amino acid permease M1S29_04135 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M1S29_04135 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M1S29_04140 PF01678 Diaminopimelate epimerase M1S29_04145 PF01810 LysE type translocator M1S29_04150 PF02899 Phage integrase, N-terminal SAM-like domain M1S29_04150 PF00589 Phage integrase family M1S29_04155 PF01012 Electron transfer flavoprotein domain M1S29_04160 PF01012 Electron transfer flavoprotein domain M1S29_04160 PF00766 Electron transfer flavoprotein FAD-binding domain M1S29_04165 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S29_04165 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S29_04180 PF00535 Glycosyl transferase family 2 M1S29_04200 PF13533 Biotin-lipoyl like M1S29_04210 PF00266 Aminotransferase class-V M1S29_04225 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M1S29_04235 PF12704 MacB-like periplasmic core domain M1S29_04235 PF02687 FtsX-like permease family M1S29_04240 PF00005 ABC transporter M1S29_04245 PF13567 Domain of unknown function (DUF4131) M1S29_04245 PF00753 Metallo-beta-lactamase superfamily M1S29_04245 PF03772 Competence protein M1S29_04255 PF06965 Na+/H+ antiporter 1 M1S29_04255 PF01343 Peptidase family S49 M1S29_04260 PF12697 Alpha/beta hydrolase family M1S29_04265 PF00551 Formyl transferase M1S29_04270 PF00586 AIR synthase related protein, N-terminal domain M1S29_04270 PF02769 AIR synthase related protein, C-terminal domain M1S29_04275 PF01594 AI-2E family transporter M1S29_04280 PF00308 Bacterial dnaA protein M1S29_04280 PF11638 DnaA N-terminal domain M1S29_04280 PF08299 Bacterial dnaA protein helix-turn-helix M1S29_04320 PF00588 SpoU rRNA Methylase family M1S29_04320 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S29_04325 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M1S29_04335 PF00691 OmpA family M1S29_04340 PF07676 WD40-like Beta Propeller Repeat M1S29_04340 PF04052 TolB amino-terminal domain M1S29_04350 PF02472 Biopolymer transport protein ExbD/TolR M1S29_04355 PF01618 MotA/TolQ/ExbB proton channel family M1S29_04360 PF03061 Thioesterase superfamily M1S29_04365 PF01546 Peptidase family M20/M25/M40 M1S29_04365 PF07687 Peptidase dimerisation domain M1S29_04370 PF17864 RuvB AAA lid domain M1S29_04370 PF05491 RuvB C-terminal winged helix domain M1S29_04370 PF05496 Holliday junction DNA helicase RuvB P-loop domain M1S29_04375 PF07499 RuvA, C-terminal domain M1S29_04375 PF01330 RuvA N terminal domain M1S29_04380 PF01966 HD domain M1S29_04385 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M1S29_04385 PF02769 AIR synthase related protein, C-terminal domain M1S29_04385 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M1S29_04390 PF07690 Major Facilitator Superfamily M1S29_04395 PF01784 NIF3 (NGG1p interacting factor 3) M1S29_04400 PF00378 Enoyl-CoA hydratase/isomerase M1S29_04405 PF01467 Cytidylyltransferase-like M1S29_04405 PF00293 NUDIX domain M1S29_04415 PF00578 AhpC/TSA family M1S29_04430 PF06508 Queuosine biosynthesis protein QueC M1S29_04440 PF00132 Bacterial transferase hexapeptide (six repeats) M1S29_04440 PF14602 Hexapeptide repeat of succinyl-transferase M1S29_04440 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M1S29_04450 PF03466 LysR substrate binding domain M1S29_04450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_04455 PF12857 TOBE-like domain M1S29_04455 PF00005 ABC transporter M1S29_04460 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_04465 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_04480 PF01063 Amino-transferase class IV M1S29_04485 PF02618 YceG-like family M1S29_04490 PF02223 Thymidylate kinase M1S29_04500 PF02910 Fumarate reductase flavoprotein C-term M1S29_04500 PF00890 FAD binding domain M1S29_04505 PF13180 PDZ domain M1S29_04515 PF00679 Elongation factor G C-terminus M1S29_04515 PF03144 Elongation factor Tu domain 2 M1S29_04515 PF00009 Elongation factor Tu GTP binding domain M1S29_04515 PF06421 GTP-binding protein LepA C-terminus M1S29_04520 PF10502 Signal peptidase, peptidase S26 M1S29_04530 PF00035 Double-stranded RNA binding motif M1S29_04530 PF14622 Ribonuclease-III-like M1S29_04535 PF07650 KH domain M1S29_04535 PF01926 50S ribosome-binding GTPase M1S29_04545 PF02565 Recombination protein O C terminal M1S29_04545 PF11967 Recombination protein O N terminal M1S29_04550 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M1S29_04555 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M1S29_04560 PF00106 short chain dehydrogenase M1S29_04590 PF00155 Aminotransferase class I and II M1S29_04600 PF00990 Diguanylate cyclase, GGDEF domain M1S29_04600 PF17151 Periplasmic sensor domain M1S29_04610 PF17757 UvrB interaction domain M1S29_04610 PF02151 UvrB/uvrC motif M1S29_04610 PF12344 Ultra-violet resistance protein B M1S29_04610 PF04851 Type III restriction enzyme, res subunit M1S29_04610 PF00271 Helicase conserved C-terminal domain M1S29_04620 PF00892 EamA-like transporter family M1S29_04625 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S29_04625 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S29_04640 PF01926 50S ribosome-binding GTPase M1S29_04640 PF01018 GTP1/OBG M1S29_04645 PF00696 Amino acid kinase family M1S29_04645 PF01472 PUA domain M1S29_04655 PF07759 Protein of unknown function (DUF1615) M1S29_04660 PF01207 Dihydrouridine synthase (Dus) M1S29_04665 PF03060 Nitronate monooxygenase M1S29_04680 PF02350 UDP-N-acetylglucosamine 2-epimerase M1S29_04710 PF03441 FAD binding domain of DNA photolyase M1S29_04710 PF00875 DNA photolyase M1S29_04715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S29_04720 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_04725 PF07943 Penicillin-binding protein 5, C-terminal domain M1S29_04725 PF00768 D-alanyl-D-alanine carboxypeptidase M1S29_04735 PF03971 Monomeric isocitrate dehydrogenase M1S29_04740 PF00849 RNA pseudouridylate synthase M1S29_04745 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S29_04765 PF06779 Uncharacterised MFS-type transporter YbfB M1S29_04770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_04770 PF03466 LysR substrate binding domain M1S29_04775 PF00375 Sodium:dicarboxylate symporter family M1S29_04780 PF02567 Phenazine biosynthesis-like protein M1S29_04785 PF00675 Insulinase (Peptidase family M16) M1S29_04785 PF05193 Peptidase M16 inactive domain M1S29_04810 PF02581 Thiamine monophosphate synthase M1S29_04815 PF00202 Aminotransferase class-III M1S29_04825 PF00849 RNA pseudouridylate synthase M1S29_04830 PF12137 RNA polymerase recycling family C-terminal M1S29_04830 PF18339 RapA N-terminal Tudor like domain 1 M1S29_04830 PF00176 SNF2 family N-terminal domain M1S29_04830 PF18337 RapA N-terminal Tudor like domain M1S29_04830 PF00271 Helicase conserved C-terminal domain M1S29_04840 PF00440 Bacterial regulatory proteins, tetR family M1S29_04845 PF00970 Oxidoreductase FAD-binding domain M1S29_04845 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S29_04845 PF00175 Oxidoreductase NAD-binding domain M1S29_04850 PF00487 Fatty acid desaturase M1S29_04860 PF00440 Bacterial regulatory proteins, tetR family M1S29_04860 PF17754 MftR C-terminal domain M1S29_04870 PF00202 Aminotransferase class-III M1S29_04875 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S29_04880 PF00171 Aldehyde dehydrogenase family M1S29_04885 PF01037 Lrp/AsnC ligand binding domain M1S29_04890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S29_04890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S29_04890 PF00205 Thiamine pyrophosphate enzyme, central domain M1S29_04895 PF00324 Amino acid permease M1S29_04900 PF12849 PBP superfamily domain M1S29_04905 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_04910 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_04915 PF00005 ABC transporter M1S29_04920 PF08496 Peptidase family S49 N-terminal M1S29_04920 PF01343 Peptidase family S49 M1S29_04935 PF00206 Lyase M1S29_04935 PF08328 Adenylosuccinate lyase C-terminal M1S29_04940 PF04356 Protein of unknown function (DUF489) M1S29_04950 PF00293 NUDIX domain M1S29_04950 PF13344 Haloacid dehalogenase-like hydrolase M1S29_04955 PF00132 Bacterial transferase hexapeptide (six repeats) M1S29_04960 PF07943 Penicillin-binding protein 5, C-terminal domain M1S29_04960 PF00768 D-alanyl-D-alanine carboxypeptidase M1S29_04975 PF01975 Survival protein SurE M1S29_04980 PF01476 LysM domain M1S29_04980 PF01551 Peptidase family M23 M1S29_04985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_04985 PF03466 LysR substrate binding domain M1S29_04990 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S29_04990 PF13654 AAA domain M1S29_04995 PF07690 Major Facilitator Superfamily M1S29_05000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S29_05005 PF13593 SBF-like CPA transporter family (DUF4137) M1S29_05010 PF01197 Ribosomal protein L31 M1S29_05025 PF04055 Radical SAM superfamily M1S29_05030 PF09285 Elongation factor P, C-terminal M1S29_05030 PF01132 Elongation factor P (EF-P) OB domain M1S29_05030 PF08207 Elongation factor P (EF-P) KOW-like domain M1S29_05035 PF02554 Carbon starvation protein CstA M1S29_05035 PF13722 5TM C-terminal transporter carbon starvation CstA M1S29_05040 PF04328 Selenoprotein, putative M1S29_05075 PF06018 CodY GAF-like domain M1S29_05075 PF17853 GGDEF-like domain M1S29_05075 PF13556 PucR C-terminal helix-turn-helix domain M1S29_05090 PF00171 Aldehyde dehydrogenase family M1S29_05095 PF00324 Amino acid permease M1S29_05100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_05100 PF03466 LysR substrate binding domain M1S29_05105 PF02028 BCCT, betaine/carnitine/choline family transporter M1S29_05110 PF02028 BCCT, betaine/carnitine/choline family transporter M1S29_05115 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S29_05115 PF00355 Rieske [2Fe-2S] domain M1S29_05120 PF00171 Aldehyde dehydrogenase family M1S29_05130 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_05130 PF18113 Rubredoxin binding C-terminal domain M1S29_05135 PF01266 FAD dependent oxidoreductase M1S29_05135 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S29_05155 PF00892 EamA-like transporter family M1S29_05165 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M1S29_05170 PF00083 Sugar (and other) transporter M1S29_05175 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S29_05175 PF13378 Enolase C-terminal domain-like M1S29_05180 PF08659 KR domain M1S29_05180 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S29_05180 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S29_05180 PF16197 Ketoacyl-synthetase C-terminal extension M1S29_05180 PF09277 Erythronolide synthase, docking M1S29_05180 PF08240 Alcohol dehydrogenase GroES-like domain M1S29_05180 PF08990 Erythronolide synthase docking M1S29_05180 PF00698 Acyl transferase domain M1S29_05180 PF00550 Phosphopantetheine attachment site M1S29_05180 PF14765 Polyketide synthase dehydratase M1S29_05185 PF00440 Bacterial regulatory proteins, tetR family M1S29_05205 PF02678 Pirin M1S29_05205 PF17954 Quercetinase C-terminal cupin domain M1S29_05215 PF13309 HTH domain M1S29_05215 PF08348 YheO-like PAS domain M1S29_05225 PF13193 AMP-binding enzyme C-terminal domain M1S29_05225 PF00501 AMP-binding enzyme M1S29_05225 PF00668 Condensation domain M1S29_05225 PF00550 Phosphopantetheine attachment site M1S29_05230 PF13193 AMP-binding enzyme C-terminal domain M1S29_05230 PF00668 Condensation domain M1S29_05230 PF00501 AMP-binding enzyme M1S29_05230 PF00975 Thioesterase domain M1S29_05230 PF00550 Phosphopantetheine attachment site M1S29_05235 PF01032 FecCD transport family M1S29_05240 PF01032 FecCD transport family M1S29_05245 PF00005 ABC transporter M1S29_05250 PF01497 Periplasmic binding protein M1S29_05255 PF07715 TonB-dependent Receptor Plug Domain M1S29_05255 PF00593 TonB dependent receptor M1S29_05260 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S29_05265 PF00550 Phosphopantetheine attachment site M1S29_05265 PF00668 Condensation domain M1S29_05265 PF00501 AMP-binding enzyme M1S29_05270 PF00501 AMP-binding enzyme M1S29_05270 PF13193 AMP-binding enzyme C-terminal domain M1S29_05275 PF00857 Isochorismatase family M1S29_05275 PF00550 Phosphopantetheine attachment site M1S29_05280 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S29_05290 PF00005 ABC transporter M1S29_05295 PF00005 ABC transporter M1S29_05300 PF00975 Thioesterase domain M1S29_05310 PF00425 chorismate binding enzyme M1S29_05320 PF01208 Uroporphyrinogen decarboxylase (URO-D) M1S29_05325 PF05675 Protein of unknown function (DUF817) M1S29_05340 PF00144 Beta-lactamase M1S29_05350 PF01227 GTP cyclohydrolase I M1S29_05355 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S29_05355 PF01799 [2Fe-2S] binding domain M1S29_05360 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M1S29_05360 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M1S29_05375 PF00218 Indole-3-glycerol phosphate synthase M1S29_05380 PF02885 Glycosyl transferase family, helical bundle domain M1S29_05380 PF00591 Glycosyl transferase family, a/b domain M1S29_05385 PF07715 TonB-dependent Receptor Plug Domain M1S29_05385 PF00593 TonB dependent receptor M1S29_05390 PF11838 ERAP1-like C-terminal domain M1S29_05390 PF01433 Peptidase family M1 domain M1S29_05395 PF00117 Glutamine amidotransferase class-I M1S29_05405 PF00854 POT family M1S29_05410 PF00120 Glutamine synthetase, catalytic domain M1S29_05410 PF03951 Glutamine synthetase, beta-Grasp domain M1S29_05415 PF04345 Chorismate lyase M1S29_05420 PF01040 UbiA prenyltransferase family M1S29_05455 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M1S29_05455 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M1S29_05460 PF01784 NIF3 (NGG1p interacting factor 3) M1S29_05465 PF13180 PDZ domain M1S29_05470 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S29_05470 PF01743 Poly A polymerase head domain M1S29_05475 PF00390 Malic enzyme, N-terminal domain M1S29_05475 PF03949 Malic enzyme, NAD binding domain M1S29_05475 PF01515 Phosphate acetyl/butaryl transferase M1S29_05480 PF00563 EAL domain M1S29_05480 PF00990 Diguanylate cyclase, GGDEF domain M1S29_05480 PF03707 Bacterial signalling protein N terminal repeat M1S29_05485 PF04452 RNA methyltransferase M1S29_05490 PF02219 Methylenetetrahydrofolate reductase M1S29_05495 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M1S29_05495 PF05221 S-adenosyl-L-homocysteine hydrolase M1S29_05510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_05510 PF09317 Domain of unknown function (DUF1974) M1S29_05510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_05515 PF04055 Radical SAM superfamily M1S29_05520 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_05520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S29_05530 PF07690 Major Facilitator Superfamily M1S29_05540 PF00557 Metallopeptidase family M24 M1S29_05545 PF00318 Ribosomal protein S2 M1S29_05550 PF00889 Elongation factor TS M1S29_05560 PF12833 Helix-turn-helix domain M1S29_05580 PF03330 Lytic transglycolase M1S29_05580 PF05036 Sporulation related domain M1S29_05585 PF13406 Transglycosylase SLT domain M1S29_05590 PF01098 Cell cycle protein M1S29_05600 PF14489 QueF-like protein M1S29_05600 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M1S29_05605 PF01061 ABC-2 type transporter M1S29_05610 PF00005 ABC transporter M1S29_05640 PF00464 Serine hydroxymethyltransferase M1S29_05650 PF00873 AcrB/AcrD/AcrF family M1S29_05655 PF13533 Biotin-lipoyl like M1S29_05660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_05660 PF03466 LysR substrate binding domain M1S29_05665 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S29_05670 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_05675 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_05680 PF00005 ABC transporter M1S29_05685 PF00893 Small Multidrug Resistance protein M1S29_05690 PF00037 4Fe-4S binding domain M1S29_05695 PF01136 Peptidase family U32 M1S29_05695 PF16325 Peptidase family U32 C-terminal domain M1S29_05700 PF00155 Aminotransferase class I and II M1S29_05700 PF00392 Bacterial regulatory proteins, gntR family M1S29_05705 PF02567 Phenazine biosynthesis-like protein M1S29_05710 PF00175 Oxidoreductase NAD-binding domain M1S29_05710 PF00970 Oxidoreductase FAD-binding domain M1S29_05715 PF01980 tRNA-methyltransferase O M1S29_05715 PF18389 TrmO C-terminal domain M1S29_05735 PF00072 Response regulator receiver domain M1S29_05735 PF00486 Transcriptional regulatory protein, C terminal M1S29_05740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_05740 PF00512 His Kinase A (phospho-acceptor) domain M1S29_05740 PF08521 Two-component sensor kinase N-terminal M1S29_05750 PF00293 NUDIX domain M1S29_05760 PF00912 Transglycosylase M1S29_05760 PF00905 Penicillin binding protein transpeptidase domain M1S29_05760 PF14814 Bifunctional transglycosylase second domain M1S29_05765 PF01513 ATP-NAD kinase M1S29_05770 PF07023 Protein of unknown function (DUF1315) M1S29_05775 PF02885 Glycosyl transferase family, helical bundle domain M1S29_05775 PF00591 Glycosyl transferase family, a/b domain M1S29_05780 PF00375 Sodium:dicarboxylate symporter family M1S29_05785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_05785 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_05785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_05790 PF00756 Putative esterase M1S29_05795 PF01842 ACT domain M1S29_05795 PF01817 Chorismate mutase type II M1S29_05795 PF00800 Prephenate dehydratase M1S29_05800 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S29_05810 PF01546 Peptidase family M20/M25/M40 M1S29_05810 PF07687 Peptidase dimerisation domain M1S29_05815 PF12706 Beta-lactamase superfamily domain M1S29_05825 PF03883 Peroxide stress protein YaaA M1S29_05835 PF05690 Thiazole biosynthesis protein ThiG M1S29_05845 PF04241 Protein of unknown function (DUF423) M1S29_05850 PF04542 Sigma-70 region 2 M1S29_05850 PF00140 Sigma-70 factor, region 1.2 M1S29_05850 PF04545 Sigma-70, region 4 M1S29_05865 PF00313 'Cold-shock' DNA-binding domain M1S29_05870 PF00270 DEAD/DEAH box helicase M1S29_05870 PF00271 Helicase conserved C-terminal domain M1S29_05880 PF00881 Nitroreductase family M1S29_05885 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M1S29_05885 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M1S29_05895 PF00589 Phage integrase family M1S29_05990 PF01555 DNA methylase M1S29_06220 PF01180 Dihydroorotate dehydrogenase M1S29_06225 PF02674 Colicin V production protein M1S29_06230 PF00156 Phosphoribosyl transferase domain M1S29_06245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S29_06245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S29_06250 PF01435 Peptidase family M48 M1S29_06255 PF09424 Yqey-like protein M1S29_06260 PF01165 Ribosomal protein S21 M1S29_06265 PF00814 Glycoprotease family M1S29_06285 PF00069 Protein kinase domain M1S29_06310 PF03466 LysR substrate binding domain M1S29_06310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_06315 PF00202 Aminotransferase class-III M1S29_06320 PF00171 Aldehyde dehydrogenase family M1S29_06325 PF00324 Amino acid permease M1S29_06355 PF04076 Bacterial OB fold (BOF) protein M1S29_06380 PF00561 alpha/beta hydrolase fold M1S29_06385 PF03616 Sodium/glutamate symporter M1S29_06395 PF07729 FCD domain M1S29_06395 PF00392 Bacterial regulatory proteins, gntR family M1S29_06445 PF08946 Osmosensory transporter coiled coil M1S29_06445 PF00083 Sugar (and other) transporter M1S29_06470 PF00155 Aminotransferase class I and II M1S29_06475 PF02080 TrkA-C domain M1S29_06475 PF06826 Predicted Permease Membrane Region M1S29_06485 PF04403 Paraquat-inducible protein A M1S29_06490 PF02470 MlaD protein M1S29_06500 PF01177 Asp/Glu/Hydantoin racemase M1S29_06505 PF00892 EamA-like transporter family M1S29_06510 PF07995 Glucose / Sorbosone dehydrogenase M1S29_06520 PF13610 DDE domain M1S29_06530 PF01636 Phosphotransferase enzyme family M1S29_06535 PF13610 DDE domain M1S29_06550 PF00132 Bacterial transferase hexapeptide (six repeats) M1S29_06560 PF00893 Small Multidrug Resistance protein M1S29_06565 PF00809 Pterin binding enzyme M1S29_06580 PF07091 Ribosomal RNA methyltransferase (FmrO) M1S29_06595 PF12848 ABC transporter M1S29_06595 PF00005 ABC transporter M1S29_06600 PF01636 Phosphotransferase enzyme family M1S29_06610 PF03050 Transposase IS66 family M1S29_06610 PF13817 IS66 C-terminal element M1S29_06610 PF13005 zinc-finger binding domain of transposase IS66 M1S29_06610 PF13007 Transposase C of IS166 homeodomain M1S29_06635 PF13610 DDE domain M1S29_06650 PF00375 Sodium:dicarboxylate symporter family M1S29_06660 PF16123 Hydroxyacylglutathione hydrolase C-terminus M1S29_06660 PF00753 Metallo-beta-lactamase superfamily M1S29_06665 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_06670 PF09383 NIL domain M1S29_06670 PF00005 ABC transporter M1S29_06675 PF03180 NLPA lipoprotein M1S29_06680 PF02843 Phosphoribosylglycinamide synthetase, C domain M1S29_06680 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M1S29_06680 PF02844 Phosphoribosylglycinamide synthetase, N domain M1S29_06685 PF02142 MGS-like domain M1S29_06685 PF01808 AICARFT/IMPCHase bienzyme M1S29_06690 PF02954 Bacterial regulatory protein, Fis family M1S29_06710 PF13932 GidA associated domain M1S29_06710 PF01134 Glucose inhibited division protein A M1S29_06720 PF14403 Circularly permuted ATP-grasp type 2 M1S29_06730 PF08379 Bacterial transglutaminase-like N-terminal region M1S29_06730 PF01841 Transglutaminase-like superfamily M1S29_06740 PF00842 Alanine racemase, C-terminal domain M1S29_06740 PF01168 Alanine racemase, N-terminal domain M1S29_06745 PF00772 DnaB-like helicase N terminal domain M1S29_06745 PF03796 DnaB-like helicase C terminal domain M1S29_06750 PF03948 Ribosomal protein L9, C-terminal domain M1S29_06750 PF01281 Ribosomal protein L9, N-terminal domain M1S29_06755 PF01084 Ribosomal protein S18 M1S29_06760 PF01250 Ribosomal protein S6 M1S29_06765 PF01040 UbiA prenyltransferase family M1S29_06770 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M1S29_06775 PF00510 Cytochrome c oxidase subunit III M1S29_06780 PF00115 Cytochrome C and Quinol oxidase polypeptide I M1S29_06785 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M1S29_06785 PF06481 COX Aromatic Rich Motif M1S29_06795 PF00391 PEP-utilising enzyme, mobile domain M1S29_06795 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M1S29_06795 PF02896 PEP-utilising enzyme, TIM barrel domain M1S29_06800 PF03618 Kinase/pyrophosphorylase M1S29_06810 PF01522 Polysaccharide deacetylase M1S29_06810 PF14883 Hypothetical glycosyl hydrolase family 13 M1S29_06815 PF00535 Glycosyl transferase family 2 M1S29_06820 PF13994 PgaD-like protein M1S29_06830 PF00296 Luciferase-like monooxygenase M1S29_06845 PF03466 LysR substrate binding domain M1S29_06845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_06855 PF00472 RF-1 domain M1S29_06855 PF03462 PCRF domain M1S29_06860 PF17827 PrmC N-terminal domain M1S29_06860 PF13847 Methyltransferase domain M1S29_06865 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_06875 PF12833 Helix-turn-helix domain M1S29_06880 PF00106 short chain dehydrogenase M1S29_06885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_06885 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_06885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_06890 PF13193 AMP-binding enzyme C-terminal domain M1S29_06890 PF00501 AMP-binding enzyme M1S29_06895 PF01613 Flavin reductase like domain M1S29_06900 PF00899 ThiF family M1S29_06905 PF03109 ABC1 family M1S29_06920 PF03814 Potassium-transporting ATPase A subunit M1S29_06930 PF02669 K+-transporting ATPase, c chain M1S29_06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_06935 PF00512 His Kinase A (phospho-acceptor) domain M1S29_06935 PF02702 Osmosensitive K+ channel His kinase sensor domain M1S29_06935 PF13493 Domain of unknown function (DUF4118) M1S29_06940 PF00072 Response regulator receiver domain M1S29_06940 PF00486 Transcriptional regulatory protein, C terminal M1S29_06945 PF00120 Glutamine synthetase, catalytic domain M1S29_06955 PF03232 Ubiquinone biosynthesis protein COQ7 M1S29_06960 PF07690 Major Facilitator Superfamily M1S29_06965 PF17243 POTRA domain TamA domain 1 M1S29_06965 PF07244 Surface antigen variable number repeat M1S29_06965 PF01103 Surface antigen M1S29_06980 PF00330 Aconitase family (aconitate hydratase) M1S29_06980 PF06434 Aconitate hydratase 2 N-terminus M1S29_06980 PF11791 Aconitate B N-terminal domain M1S29_06990 PF00520 Ion transport protein M1S29_06990 PF00027 Cyclic nucleotide-binding domain M1S29_06995 PF07690 Major Facilitator Superfamily M1S29_07010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_07010 PF03466 LysR substrate binding domain M1S29_07015 PF04284 Protein of unknown function (DUF441) M1S29_07025 PF01479 S4 domain M1S29_07025 PF00849 RNA pseudouridylate synthase M1S29_07040 PF01479 S4 domain M1S29_07040 PF00849 RNA pseudouridylate synthase M1S29_07045 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M1S29_07050 PF08676 MutL C terminal dimerisation domain M1S29_07050 PF01119 DNA mismatch repair protein, C-terminal domain M1S29_07060 PF17209 Hfq protein M1S29_07070 PF00881 Nitroreductase family M1S29_07080 PF00149 Calcineurin-like phosphoesterase M1S29_07085 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S29_07090 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S29_07090 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M1S29_07095 PF00117 Glutamine amidotransferase class-I M1S29_07095 PF00958 GMP synthase C terminal domain M1S29_07095 PF02540 NAD synthase M1S29_07100 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M1S29_07105 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M1S29_07110 PF13520 Amino acid permease M1S29_07115 PF00171 Aldehyde dehydrogenase family M1S29_07130 PF00465 Iron-containing alcohol dehydrogenase M1S29_07135 PF05970 PIF1-like helicase M1S29_07135 PF14493 Helix-turn-helix domain M1S29_07145 PF06445 GyrI-like small molecule binding domain M1S29_07150 PF02110 Hydroxyethylthiazole kinase family M1S29_07165 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M1S29_07165 PF11940 Domain of unknown function (DUF3458) Ig-like fold M1S29_07165 PF01433 Peptidase family M1 domain M1S29_07175 PF00106 short chain dehydrogenase M1S29_07185 PF01817 Chorismate mutase type II M1S29_07190 PF01037 Lrp/AsnC ligand binding domain M1S29_07205 PF00440 Bacterial regulatory proteins, tetR family M1S29_07210 PF00593 TonB dependent receptor M1S29_07210 PF07715 TonB-dependent Receptor Plug Domain M1S29_07215 PF00924 Mechanosensitive ion channel M1S29_07250 PF00593 TonB dependent receptor M1S29_07250 PF07715 TonB-dependent Receptor Plug Domain M1S29_07270 PF12848 ABC transporter M1S29_07270 PF00005 ABC transporter M1S29_07275 PF00582 Universal stress protein family M1S29_07300 PF00690 Cation transporter/ATPase, N-terminus M1S29_07300 PF00689 Cation transporting ATPase, C-terminus M1S29_07305 PF02308 MgtC family M1S29_07310 PF03594 Benzoate membrane transport protein M1S29_07315 PF01037 Lrp/AsnC ligand binding domain M1S29_07320 PF01810 LysE type translocator M1S29_07325 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1S29_07330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_07330 PF03466 LysR substrate binding domain M1S29_07340 PF02803 Thiolase, C-terminal domain M1S29_07340 PF00108 Thiolase, N-terminal domain M1S29_07350 PF01575 MaoC like domain M1S29_07355 PF00144 Beta-lactamase M1S29_07365 PF07690 Major Facilitator Superfamily M1S29_07370 PF12169 DNA polymerase III subunits gamma and tau domain III M1S29_07370 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M1S29_07370 PF12170 DNA polymerase III tau subunit V interacting with alpha M1S29_07375 PF04185 Phosphoesterase family M1S29_07375 PF05506 Domain of unknown function (DUF756) M1S29_07380 PF03061 Thioesterase superfamily M1S29_07385 PF00465 Iron-containing alcohol dehydrogenase M1S29_07395 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S29_07400 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M1S29_07400 PF01565 FAD binding domain M1S29_07415 PF01645 Conserved region in glutamate synthase M1S29_07520 PF01555 DNA methylase M1S29_07785 PF12832 MFS_1 like family M1S29_07795 PF02785 Biotin carboxylase C-terminal domain M1S29_07795 PF00289 Biotin carboxylase, N-terminal domain M1S29_07795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S29_07800 PF00364 Biotin-requiring enzyme M1S29_07805 PF01220 Dehydroquinase class II M1S29_07810 PF13438 Domain of unknown function (DUF4113) M1S29_07810 PF00817 impB/mucB/samB family M1S29_07810 PF11799 impB/mucB/samB family C-terminal domain M1S29_07820 PF00005 ABC transporter M1S29_07825 PF00072 Response regulator receiver domain M1S29_07825 PF00486 Transcriptional regulatory protein, C terminal M1S29_07835 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S29_07835 PF13806 Rieske-like [2Fe-2S] domain M1S29_07835 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_07835 PF04324 BFD-like [2Fe-2S] binding domain M1S29_07835 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S29_07835 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S29_07840 PF04324 BFD-like [2Fe-2S] binding domain M1S29_07840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S29_07840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S29_07840 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_07840 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S29_07845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S29_07845 PF01568 Molydopterin dinucleotide binding domain M1S29_07845 PF04324 BFD-like [2Fe-2S] binding domain M1S29_07845 PF00384 Molybdopterin oxidoreductase M1S29_07850 PF12804 MobA-like NTP transferase domain M1S29_07855 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S29_07855 PF01568 Molydopterin dinucleotide binding domain M1S29_07855 PF00384 Molybdopterin oxidoreductase M1S29_07860 PF04055 Radical SAM superfamily M1S29_07860 PF06463 Molybdenum Cofactor Synthesis C M1S29_07870 PF02391 MoaE protein M1S29_07875 PF00994 Probable molybdopterin binding domain M1S29_07875 PF01967 MoaC family M1S29_07880 PF03453 MoeA N-terminal region (domain I and II) M1S29_07880 PF03454 MoeA C-terminal region (domain IV) M1S29_07880 PF00994 Probable molybdopterin binding domain M1S29_07885 PF01638 HxlR-like helix-turn-helix M1S29_07890 PF00155 Aminotransferase class I and II M1S29_07890 PF00392 Bacterial regulatory proteins, gntR family M1S29_07895 PF00892 EamA-like transporter family M1S29_07915 PF02635 DsrE/DsrF-like family M1S29_07920 PF16363 GDP-mannose 4,6 dehydratase M1S29_07925 PF00206 Lyase M1S29_07925 PF10415 Fumarase C C-terminus M1S29_07945 PF01266 FAD dependent oxidoreductase M1S29_07955 PF02542 YgbB family M1S29_07965 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S29_07965 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S29_07985 PF00158 Sigma-54 interaction domain M1S29_07985 PF02954 Bacterial regulatory protein, Fis family M1S29_07985 PF00072 Response regulator receiver domain M1S29_07990 PF00512 His Kinase A (phospho-acceptor) domain M1S29_07990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_07990 PF00989 PAS fold M1S29_07995 PF04055 Radical SAM superfamily M1S29_07995 PF18693 TRAM domain M1S29_07995 PF00919 Uncharacterized protein family UPF0004 M1S29_08000 PF00696 Amino acid kinase family M1S29_08005 PF01765 Ribosome recycling factor M1S29_08010 PF01255 Putative undecaprenyl diphosphate synthase M1S29_08020 PF13288 DXP reductoisomerase C-terminal domain M1S29_08020 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M1S29_08020 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M1S29_08025 PF02163 Peptidase family M50 M1S29_08025 PF17820 PDZ domain M1S29_08025 PF13180 PDZ domain M1S29_08030 PF01103 Surface antigen M1S29_08030 PF07244 Surface antigen variable number repeat M1S29_08040 PF00132 Bacterial transferase hexapeptide (six repeats) M1S29_08040 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M1S29_08045 PF07977 FabA-like domain M1S29_08050 PF00132 Bacterial transferase hexapeptide (six repeats) M1S29_08050 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M1S29_08065 PF02631 RecX family M1S29_08070 PF00154 recA bacterial DNA recombination protein M1S29_08075 PF01479 S4 domain M1S29_08080 PF13419 Haloacid dehalogenase-like hydrolase M1S29_08105 PF01037 Lrp/AsnC ligand binding domain M1S29_08110 PF00266 Aminotransferase class-V M1S29_08115 PF00324 Amino acid permease M1S29_08130 PF00082 Subtilase family M1S29_08130 PF05922 Peptidase inhibitor I9 M1S29_08135 PF01740 STAS domain M1S29_08135 PF00916 Sulfate permease family M1S29_08140 PF02586 SOS response associated peptidase (SRAP) M1S29_08145 PF07995 Glucose / Sorbosone dehydrogenase M1S29_08155 PF03707 Bacterial signalling protein N terminal repeat M1S29_08155 PF00990 Diguanylate cyclase, GGDEF domain M1S29_08155 PF00563 EAL domain M1S29_08175 PF02378 Phosphotransferase system, EIIC M1S29_08175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M1S29_08180 PF00294 pfkB family carbohydrate kinase M1S29_08185 PF05524 PEP-utilising enzyme, N-terminal M1S29_08185 PF00391 PEP-utilising enzyme, mobile domain M1S29_08185 PF02896 PEP-utilising enzyme, TIM barrel domain M1S29_08185 PF00381 PTS HPr component phosphorylation site M1S29_08185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M1S29_08210 PF05525 Branched-chain amino acid transport protein M1S29_08215 PF00557 Metallopeptidase family M24 M1S29_08220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_08220 PF03466 LysR substrate binding domain M1S29_08230 PF00462 Glutaredoxin M1S29_08235 PF00202 Aminotransferase class-III M1S29_08240 PF00571 CBS domain M1S29_08240 PF00478 IMP dehydrogenase / GMP reductase domain M1S29_08265 PF02881 SRP54-type protein, helical bundle domain M1S29_08265 PF00448 SRP54-type protein, GTPase domain M1S29_08275 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M1S29_08290 PF08173 Membrane bound YbgT-like protein M1S29_08295 PF02322 Cytochrome bd terminal oxidase subunit II M1S29_08300 PF01654 Cytochrome bd terminal oxidase subunit I M1S29_08310 PF07290 Protein of unknown function (DUF1449) M1S29_08320 PF00294 pfkB family carbohydrate kinase M1S29_08325 PF00593 TonB dependent receptor M1S29_08325 PF07715 TonB-dependent Receptor Plug Domain M1S29_08330 PF00675 Insulinase (Peptidase family M16) M1S29_08330 PF08367 Peptidase M16C associated M1S29_08330 PF05193 Peptidase M16 inactive domain M1S29_08335 PF02253 Phospholipase A1 M1S29_08340 PF02386 Cation transport protein M1S29_08345 PF02254 TrkA-N domain M1S29_08345 PF02080 TrkA-C domain M1S29_08350 PF00585 C-terminal regulatory domain of Threonine dehydratase M1S29_08350 PF00291 Pyridoxal-phosphate dependent enzyme M1S29_08355 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M1S29_08370 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S29_08370 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S29_08380 PF02617 ATP-dependent Clp protease adaptor protein ClpS M1S29_08385 PF10431 C-terminal, D2-small domain, of ClpB protein M1S29_08385 PF17871 AAA lid domain M1S29_08385 PF07724 AAA domain (Cdc48 subfamily) M1S29_08385 PF00004 ATPase family associated with various cellular activities (AAA) M1S29_08385 PF02861 Clp amino terminal domain, pathogenicity island component M1S29_08390 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M1S29_08395 PF00793 DAHP synthetase I family M1S29_08410 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_08410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S29_08440 PF06418 CTP synthase N-terminus M1S29_08440 PF00117 Glutamine amidotransferase class-I M1S29_08445 PF00793 DAHP synthetase I family M1S29_08450 PF00113 Enolase, C-terminal TIM barrel domain M1S29_08450 PF03952 Enolase, N-terminal domain M1S29_08455 PF04239 Protein of unknown function (DUF421) M1S29_08460 PF04977 Septum formation initiator M1S29_08465 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M1S29_08470 PF01144 Coenzyme A transferase M1S29_08475 PF01144 Coenzyme A transferase M1S29_08480 PF00108 Thiolase, N-terminal domain M1S29_08480 PF02803 Thiolase, C-terminal domain M1S29_08485 PF00206 Lyase M1S29_08485 PF10397 Adenylosuccinate lyase C-terminus M1S29_08490 PF00561 alpha/beta hydrolase fold M1S29_08495 PF07690 Major Facilitator Superfamily M1S29_08500 PF02627 Carboxymuconolactone decarboxylase family M1S29_08505 PF00775 Dioxygenase M1S29_08505 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M1S29_08510 PF00775 Dioxygenase M1S29_08515 PF01487 Type I 3-dehydroquinase M1S29_08520 PF05048 Periplasmic copper-binding protein (NosD) M1S29_08525 PF04966 Carbohydrate-selective porin, OprB family M1S29_08530 PF13360 PQQ-like domain M1S29_08530 PF01011 PQQ enzyme repeat M1S29_08540 PF04143 Sulphur transport M1S29_08550 PF00753 Metallo-beta-lactamase superfamily M1S29_08555 PF09339 IclR helix-turn-helix domain M1S29_08555 PF01614 Bacterial transcriptional regulator M1S29_08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_08560 PF03466 LysR substrate binding domain M1S29_08565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_08565 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_08565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_08580 PF00106 short chain dehydrogenase M1S29_08590 PF07690 Major Facilitator Superfamily M1S29_08600 PF01425 Amidase M1S29_08605 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S29_08620 PF00355 Rieske [2Fe-2S] domain M1S29_08620 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S29_08635 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S29_08635 PF00175 Oxidoreductase NAD-binding domain M1S29_08640 PF01613 Flavin reductase like domain M1S29_08645 PF02311 AraC-like ligand binding domain M1S29_08645 PF12833 Helix-turn-helix domain M1S29_08650 PF01179 Copper amine oxidase, enzyme domain M1S29_08650 PF07833 Copper amine oxidase N-terminal domain M1S29_08650 PF02727 Copper amine oxidase, N2 domain M1S29_08650 PF02728 Copper amine oxidase, N3 domain M1S29_08660 PF00171 Aldehyde dehydrogenase family M1S29_08665 PF01804 Penicillin amidase M1S29_08670 PF12146 Serine aminopeptidase, S33 M1S29_08675 PF00108 Thiolase, N-terminal domain M1S29_08675 PF02803 Thiolase, C-terminal domain M1S29_08680 PF01144 Coenzyme A transferase M1S29_08690 PF04444 Catechol dioxygenase N terminus M1S29_08690 PF00775 Dioxygenase M1S29_08695 PF02426 Muconolactone delta-isomerase M1S29_08700 PF13378 Enolase C-terminal domain-like M1S29_08700 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S29_08705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_08705 PF03466 LysR substrate binding domain M1S29_08715 PF07729 FCD domain M1S29_08715 PF00392 Bacterial regulatory proteins, gntR family M1S29_08720 PF00920 Dehydratase family M1S29_08725 PF07690 Major Facilitator Superfamily M1S29_08735 PF00171 Aldehyde dehydrogenase family M1S29_08755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_08755 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_08755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_08765 PF06506 Propionate catabolism activator M1S29_08765 PF00158 Sigma-54 interaction domain M1S29_08765 PF02954 Bacterial regulatory protein, Fis family M1S29_08770 PF00501 AMP-binding enzyme M1S29_08770 PF13193 AMP-binding enzyme C-terminal domain M1S29_08775 PF04341 Protein of unknown function, DUF485 M1S29_08780 PF00474 Sodium:solute symporter family M1S29_08785 PF08240 Alcohol dehydrogenase GroES-like domain M1S29_08785 PF00107 Zinc-binding dehydrogenase M1S29_08790 PF00171 Aldehyde dehydrogenase family M1S29_08800 PF00561 alpha/beta hydrolase fold M1S29_08805 PF00199 Catalase M1S29_08805 PF06628 Catalase-related immune-responsive M1S29_08820 PF07859 alpha/beta hydrolase fold M1S29_08825 PF01047 MarR family M1S29_08830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S29_08830 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_08835 PF00106 short chain dehydrogenase M1S29_08840 PF01872 RibD C-terminal domain M1S29_08845 PF09278 MerR, DNA binding M1S29_08845 PF00376 MerR family regulatory protein M1S29_08855 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_08865 PF12706 Beta-lactamase superfamily domain M1S29_08870 PF00440 Bacterial regulatory proteins, tetR family M1S29_08870 PF08359 YsiA-like protein, C-terminal region M1S29_08880 PF00857 Isochorismatase family M1S29_08885 PF03466 LysR substrate binding domain M1S29_08885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_08890 PF07995 Glucose / Sorbosone dehydrogenase M1S29_08895 PF02254 TrkA-N domain M1S29_08895 PF00999 Sodium/hydrogen exchanger family M1S29_08905 PF07687 Peptidase dimerisation domain M1S29_08905 PF01546 Peptidase family M20/M25/M40 M1S29_08915 PF08479 POTRA domain, ShlB-type M1S29_08915 PF17287 POTRA domain M1S29_08915 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M1S29_08920 PF04829 Pre-toxin domain with VENN motif M1S29_08920 PF13018 Extended Signal Peptide of Type V secretion system M1S29_08920 PF13332 Hemagglutinin repeat M1S29_08920 PF05860 haemagglutination activity domain M1S29_08935 PF07690 Major Facilitator Superfamily M1S29_08940 PF04909 Amidohydrolase M1S29_08950 PF00392 Bacterial regulatory proteins, gntR family M1S29_08950 PF07702 UTRA domain M1S29_08955 PF08450 SMP-30/Gluconolactonase/LRE-like region M1S29_08965 PF03466 LysR substrate binding domain M1S29_08965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_08985 PF07690 Major Facilitator Superfamily M1S29_08990 PF01842 ACT domain M1S29_08990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S29_08990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S29_08995 PF03737 Aldolase/RraA M1S29_09025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S29_09025 PF00529 HlyD membrane-fusion protein of T1SS M1S29_09040 PF00171 Aldehyde dehydrogenase family M1S29_09045 PF00920 Dehydratase family M1S29_09055 PF03466 LysR substrate binding domain M1S29_09055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_09060 PF01370 NAD dependent epimerase/dehydratase family M1S29_09065 PF07690 Major Facilitator Superfamily M1S29_09070 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S29_09070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S29_09075 PF12833 Helix-turn-helix domain M1S29_09075 PF06719 AraC-type transcriptional regulator N-terminus M1S29_09090 PF08240 Alcohol dehydrogenase GroES-like domain M1S29_09090 PF00107 Zinc-binding dehydrogenase M1S29_09100 PF01032 FecCD transport family M1S29_09105 PF00005 ABC transporter M1S29_09125 PF14572 Phosphoribosyl synthetase-associated domain M1S29_09125 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S29_09130 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S29_09205 PF00196 Bacterial regulatory proteins, luxR family M1S29_09210 PF01425 Amidase M1S29_09215 PF13533 Biotin-lipoyl like M1S29_09220 PF07690 Major Facilitator Superfamily M1S29_09245 PF01975 Survival protein SurE M1S29_09255 PF13291 ACT domain M1S29_09255 PF04607 Region found in RelA / SpoT proteins M1S29_09255 PF02824 TGS domain M1S29_09305 PF12146 Serine aminopeptidase, S33 M1S29_09310 PF12833 Helix-turn-helix domain M1S29_09310 PF02311 AraC-like ligand binding domain M1S29_09320 PF00512 His Kinase A (phospho-acceptor) domain M1S29_09320 PF00672 HAMP domain M1S29_09320 PF16527 Two-component sensor protein CpxA, periplasmic domain M1S29_09320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_09340 PF00529 HlyD membrane-fusion protein of T1SS M1S29_09340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S29_09345 PF00873 AcrB/AcrD/AcrF family M1S29_09350 PF02321 Outer membrane efflux protein M1S29_09355 PF12146 Serine aminopeptidase, S33 M1S29_09360 PF00743 Flavin-binding monooxygenase-like M1S29_09365 PF01593 Flavin containing amine oxidoreductase M1S29_09380 PF01266 FAD dependent oxidoreductase M1S29_09400 PF16970 Type-1 fimbrial protein, A M1S29_09410 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S29_09410 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S29_09415 PF13953 PapC C-terminal domain M1S29_09415 PF13954 PapC N-terminal domain M1S29_09415 PF00577 Outer membrane usher protein M1S29_09420 PF00419 Fimbrial protein M1S29_09430 PF00107 Zinc-binding dehydrogenase M1S29_09430 PF08240 Alcohol dehydrogenase GroES-like domain M1S29_09440 PF00199 Catalase M1S29_09455 PF13091 PLD-like domain M1S29_09475 PF01244 Membrane dipeptidase (Peptidase family M19) M1S29_09480 PF04055 Radical SAM superfamily M1S29_09480 PF13186 Iron-sulfur cluster-binding domain M1S29_09485 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M1S29_09490 PF03070 TENA/THI-4/PQQC family M1S29_09495 PF12706 Beta-lactamase superfamily domain M1S29_09500 PF08042 PqqA family M1S29_09505 PF13089 Polyphosphate kinase N-terminal domain M1S29_09505 PF17941 Polyphosphate kinase C-terminal domain 1 M1S29_09505 PF02503 Polyphosphate kinase middle domain M1S29_09505 PF13090 Polyphosphate kinase C-terminal domain 2 M1S29_09510 PF00149 Calcineurin-like phosphoesterase M1S29_09520 PF00550 Phosphopantetheine attachment site M1S29_09520 PF00857 Isochorismatase family M1S29_09525 PF00106 short chain dehydrogenase M1S29_09530 PF00005 ABC transporter M1S29_09530 PF03459 TOBE domain M1S29_09535 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_09545 PF03459 TOBE domain M1S29_09545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_09550 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S29_09550 PF00355 Rieske [2Fe-2S] domain M1S29_09555 PF00866 Ring hydroxylating beta subunit M1S29_09560 PF00175 Oxidoreductase NAD-binding domain M1S29_09560 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S29_09560 PF00970 Oxidoreductase FAD-binding domain M1S29_09565 PF14525 AraC-binding-like domain M1S29_09565 PF12833 Helix-turn-helix domain M1S29_09575 PF01613 Flavin reductase like domain M1S29_09590 PF01738 Dienelactone hydrolase family M1S29_09595 PF07690 Major Facilitator Superfamily M1S29_09600 PF06719 AraC-type transcriptional regulator N-terminus M1S29_09600 PF12833 Helix-turn-helix domain M1S29_09625 PF03466 LysR substrate binding domain M1S29_09625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_09630 PF01144 Coenzyme A transferase M1S29_09635 PF01144 Coenzyme A transferase M1S29_09640 PF02667 Short chain fatty acid transporter M1S29_09645 PF02803 Thiolase, C-terminal domain M1S29_09645 PF00108 Thiolase, N-terminal domain M1S29_09650 PF03466 LysR substrate binding domain M1S29_09650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_09655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_09655 PF03466 LysR substrate binding domain M1S29_09670 PF10415 Fumarase C C-terminus M1S29_09670 PF00206 Lyase M1S29_09675 PF07715 TonB-dependent Receptor Plug Domain M1S29_09675 PF00593 TonB dependent receptor M1S29_09680 PF00083 Sugar (and other) transporter M1S29_09695 PF00005 ABC transporter M1S29_09700 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_09705 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S29_09720 PF07702 UTRA domain M1S29_09720 PF00392 Bacterial regulatory proteins, gntR family M1S29_09730 PF02525 Flavodoxin-like fold M1S29_09735 PF01638 HxlR-like helix-turn-helix M1S29_09740 PF12833 Helix-turn-helix domain M1S29_09740 PF06445 GyrI-like small molecule binding domain M1S29_09755 PF01925 Sulfite exporter TauE/SafE M1S29_09770 PF00753 Metallo-beta-lactamase superfamily M1S29_09770 PF04273 Putative phosphatase (DUF442) M1S29_09775 PF02954 Bacterial regulatory protein, Fis family M1S29_09775 PF00158 Sigma-54 interaction domain M1S29_09775 PF00072 Response regulator receiver domain M1S29_09780 PF01062 Bestrophin, RFP-TM, chloride channel M1S29_09785 PF00107 Zinc-binding dehydrogenase M1S29_09785 PF08240 Alcohol dehydrogenase GroES-like domain M1S29_09790 PF00106 short chain dehydrogenase M1S29_09795 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_09795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S29_09800 PF00364 Biotin-requiring enzyme M1S29_09800 PF02817 e3 binding domain M1S29_09800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S29_09805 PF02780 Transketolase, C-terminal domain M1S29_09805 PF02779 Transketolase, pyrimidine binding domain M1S29_09810 PF00676 Dehydrogenase E1 component M1S29_09815 PF04055 Radical SAM superfamily M1S29_09830 PF08448 PAS fold M1S29_09830 PF00990 Diguanylate cyclase, GGDEF domain M1S29_09835 PF01264 Chorismate synthase M1S29_09840 PF05175 Methyltransferase small domain M1S29_09845 PF00291 Pyridoxal-phosphate dependent enzyme M1S29_09855 PF01434 Peptidase family M41 M1S29_09855 PF00004 ATPase family associated with various cellular activities (AAA) M1S29_09855 PF17862 AAA+ lid domain M1S29_09865 PF05166 YcgL domain M1S29_09885 PF01612 3'-5' exonuclease M1S29_09885 PF00570 HRDC domain M1S29_09890 PF02132 RecR protein M1S29_09890 PF13662 Toprim domain M1S29_09895 PF02575 YbaB/EbfC DNA-binding family M1S29_09905 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S29_09910 PF00561 alpha/beta hydrolase fold M1S29_09915 PF08241 Methyltransferase domain M1S29_09945 PF01230 HIT domain M1S29_09980 PF00005 ABC transporter M1S29_09985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S29_09995 PF02684 Lipid-A-disaccharide synthetase M1S29_10000 PF00593 TonB dependent receptor M1S29_10000 PF07715 TonB-dependent Receptor Plug Domain M1S29_10020 PF01925 Sulfite exporter TauE/SafE M1S29_10025 PF00793 DAHP synthetase I family M1S29_10030 PF02654 Cobalamin-5-phosphate synthase M1S29_10045 PF02277 Phosphoribosyltransferase M1S29_10050 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M1S29_10060 PF13419 Haloacid dehalogenase-like hydrolase M1S29_10085 PF07715 TonB-dependent Receptor Plug Domain M1S29_10085 PF00593 TonB dependent receptor M1S29_10100 PF06276 Ferric iron reductase FhuF-like transporter M1S29_10100 PF04183 IucA / IucC family M1S29_10105 PF06276 Ferric iron reductase FhuF-like transporter M1S29_10105 PF04183 IucA / IucC family M1S29_10110 PF07690 Major Facilitator Superfamily M1S29_10115 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S29_10120 PF06276 Ferric iron reductase FhuF-like transporter M1S29_10120 PF04183 IucA / IucC family M1S29_10125 PF04073 Aminoacyl-tRNA editing domain M1S29_10135 PF03109 ABC1 family M1S29_10140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_10140 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_10140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_10145 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_10145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_10145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_10150 PF00487 Fatty acid desaturase M1S29_10155 PF12852 Cupin M1S29_10155 PF12833 Helix-turn-helix domain M1S29_10160 PF09312 SurA N-terminal domain M1S29_10160 PF00639 PPIC-type PPIASE domain M1S29_10165 PF00216 Bacterial DNA-binding protein M1S29_10180 PF02082 Transcriptional regulator M1S29_10185 PF00266 Aminotransferase class-V M1S29_10190 PF01592 NifU-like N terminal domain M1S29_10195 PF01521 Iron-sulphur cluster biosynthesis M1S29_10200 PF00226 DnaJ domain M1S29_10200 PF07743 HSCB C-terminal oligomerisation domain M1S29_10205 PF00012 Hsp70 protein M1S29_10210 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S29_10215 PF00211 Adenylate and Guanylate cyclase catalytic domain M1S29_10225 PF00271 Helicase conserved C-terminal domain M1S29_10225 PF00270 DEAD/DEAH box helicase M1S29_10225 PF02559 CarD-like/TRCF domain M1S29_10225 PF03461 TRCF domain M1S29_10225 PF17757 UvrB interaction domain M1S29_10245 PF03737 Aldolase/RraA M1S29_10250 PF13460 NAD(P)H-binding M1S29_10255 PF01649 Ribosomal protein S20 M1S29_10265 PF00459 Inositol monophosphatase family M1S29_10280 PF00005 ABC transporter M1S29_10280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S29_10285 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_10290 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_10295 PF01432 Peptidase family M3 M1S29_10335 PF01618 MotA/TolQ/ExbB proton channel family M1S29_10340 PF02472 Biopolymer transport protein ExbD/TolR M1S29_10345 PF02472 Biopolymer transport protein ExbD/TolR M1S29_10355 PF01274 Malate synthase M1S29_10360 PF03969 AFG1-like ATPase M1S29_10370 PF00743 Flavin-binding monooxygenase-like M1S29_10380 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M1S29_10390 PF00216 Bacterial DNA-binding protein M1S29_10395 PF00575 S1 RNA binding domain M1S29_10400 PF02224 Cytidylate kinase M1S29_10410 PF14437 MafB19-like deaminase M1S29_10420 PF03167 Uracil DNA glycosylase superfamily M1S29_10430 PF03934 Type II secretion system (T2SS), protein K M1S29_10435 PF07963 Prokaryotic N-terminal methylation motif M1S29_10435 PF11612 Type II secretion system (T2SS), protein J M1S29_10440 PF07963 Prokaryotic N-terminal methylation motif M1S29_10440 PF02501 Type II secretion system (T2SS), protein I M1S29_10455 PF01026 TatD related DNase M1S29_10465 PF09115 DNA polymerase III, delta subunit, C terminal M1S29_10470 PF02348 Cytidylyltransferase M1S29_10475 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M1S29_10480 PF00005 ABC transporter M1S29_10480 PF00664 ABC transporter transmembrane region M1S29_10490 PF01618 MotA/TolQ/ExbB proton channel family M1S29_10495 PF17762 HTH domain found in ParB protein M1S29_10495 PF02195 ParB-like nuclease domain M1S29_10500 PF13614 AAA domain M1S29_10505 PF02527 rRNA small subunit methyltransferase G M1S29_10510 PF00483 Nucleotidyl transferase M1S29_10515 PF01636 Phosphotransferase enzyme family M1S29_10520 PF04453 LPS transport system D M1S29_10520 PF03968 OstA-like protein M1S29_10525 PF00639 PPIC-type PPIASE domain M1S29_10525 PF09312 SurA N-terminal domain M1S29_10530 PF01116 Fructose-bisphosphate aldolase class-II M1S29_10540 PF00162 Phosphoglycerate kinase M1S29_10550 PF02545 Maf-like protein M1S29_10555 PF08007 Cupin superfamily protein M1S29_10570 PF00375 Sodium:dicarboxylate symporter family M1S29_10575 PF06912 Protein of unknown function (DUF1275) M1S29_10580 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M1S29_10585 PF00005 ABC transporter M1S29_10585 PF00664 ABC transporter transmembrane region M1S29_10595 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S29_10595 PF12833 Helix-turn-helix domain M1S29_10600 PF01597 Glycine cleavage H-protein M1S29_10605 PF02146 Sir2 family M1S29_10610 PF00474 Sodium:solute symporter family M1S29_10615 PF01037 Lrp/AsnC ligand binding domain M1S29_10620 PF01619 Proline dehydrogenase M1S29_10620 PF00171 Aldehyde dehydrogenase family M1S29_10620 PF14850 DNA-binding domain of Proline dehydrogenase M1S29_10620 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M1S29_10625 PF04229 GrpB protein M1S29_10630 PF05958 tRNA (Uracil-5-)-methyltransferase M1S29_10640 PF09992 Phosphodiester glycosidase M1S29_10650 PF04264 YceI-like domain M1S29_10660 PF02779 Transketolase, pyrimidine binding domain M1S29_10660 PF00456 Transketolase, thiamine diphosphate binding domain M1S29_10660 PF02780 Transketolase, C-terminal domain M1S29_10665 PF02772 S-adenosylmethionine synthetase, central domain M1S29_10665 PF02773 S-adenosylmethionine synthetase, C-terminal domain M1S29_10665 PF00438 S-adenosylmethionine synthetase, N-terminal domain M1S29_10690 PF00905 Penicillin binding protein transpeptidase domain M1S29_10705 PF02075 Crossover junction endodeoxyribonuclease RuvC M1S29_10710 PF01256 Carbohydrate kinase M1S29_10710 PF03853 YjeF-related protein N-terminus M1S29_10715 PF08331 Domain of unknown function (DUF1730) M1S29_10720 PF06968 Biotin and Thiamin Synthesis associated domain M1S29_10720 PF04055 Radical SAM superfamily M1S29_10735 PF16970 Type-1 fimbrial protein, A M1S29_10740 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S29_10740 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S29_10745 PF13954 PapC N-terminal domain M1S29_10745 PF13953 PapC C-terminal domain M1S29_10745 PF00577 Outer membrane usher protein M1S29_10765 PF00892 EamA-like transporter family M1S29_10775 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S29_10785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_10785 PF03466 LysR substrate binding domain M1S29_10805 PF00440 Bacterial regulatory proteins, tetR family M1S29_10815 PF01709 Transcriptional regulator M1S29_10820 PF01037 Lrp/AsnC ligand binding domain M1S29_10830 PF00005 ABC transporter M1S29_10835 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_10840 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_10855 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S29_10855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_10865 PF00296 Luciferase-like monooxygenase M1S29_10870 PF03180 NLPA lipoprotein M1S29_10875 PF03180 NLPA lipoprotein M1S29_10880 PF09383 NIL domain M1S29_10880 PF00005 ABC transporter M1S29_10885 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_10890 PF06071 Protein of unknown function (DUF933) M1S29_10890 PF01926 50S ribosome-binding GTPase M1S29_10915 PF03591 AzlC protein M1S29_10920 PF05437 Branched-chain amino acid transport protein (AzlD) M1S29_10930 PF02222 ATP-grasp domain M1S29_10935 PF08335 GlnD PII-uridylyltransferase M1S29_10935 PF01966 HD domain M1S29_10935 PF01909 Nucleotidyltransferase domain M1S29_10940 PF00155 Aminotransferase class I and II M1S29_10950 PF12833 Helix-turn-helix domain M1S29_10950 PF12852 Cupin M1S29_10955 PF00255 Glutathione peroxidase M1S29_10960 PF01641 SelR domain M1S29_10965 PF00155 Aminotransferase class I and II M1S29_10970 PF00375 Sodium:dicarboxylate symporter family M1S29_10975 PF00710 Asparaginase, N-terminal M1S29_10975 PF17763 Glutaminase/Asparaginase C-terminal domain M1S29_10980 PF02811 PHP domain M1S29_10980 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S29_10980 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S29_10980 PF14579 Helix-hairpin-helix motif M1S29_10980 PF01336 OB-fold nucleic acid binding domain M1S29_10985 PF00588 SpoU rRNA Methylase family M1S29_10990 PF00132 Bacterial transferase hexapeptide (six repeats) M1S29_11005 PF13192 Thioredoxin domain M1S29_11005 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_11020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_11020 PF03466 LysR substrate binding domain M1S29_11025 PF01758 Sodium Bile acid symporter family M1S29_11030 PF01022 Bacterial regulatory protein, arsR family M1S29_11035 PF03960 ArsC family M1S29_11045 PF13382 Adenine deaminase C-terminal domain M1S29_11045 PF01979 Amidohydrolase family M1S29_11055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_11055 PF03466 LysR substrate binding domain M1S29_11065 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S29_11070 PF01177 Asp/Glu/Hydantoin racemase M1S29_11075 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M1S29_11080 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_11085 PF00005 ABC transporter M1S29_11090 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S29_11100 PF00083 Sugar (and other) transporter M1S29_11105 PF00296 Luciferase-like monooxygenase M1S29_11110 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S29_11110 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_11110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_11120 PF01654 Cytochrome bd terminal oxidase subunit I M1S29_11125 PF02322 Cytochrome bd terminal oxidase subunit II M1S29_11135 PF00392 Bacterial regulatory proteins, gntR family M1S29_11135 PF00155 Aminotransferase class I and II M1S29_11140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_11140 PF03466 LysR substrate binding domain M1S29_11155 PF00698 Acyl transferase domain M1S29_11160 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M1S29_11170 PF01039 Carboxyl transferase domain M1S29_11175 PF06857 Malonate decarboxylase delta subunit (MdcD) M1S29_11180 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M1S29_11185 PF16957 Malonate decarboxylase, alpha subunit, transporter M1S29_11190 PF07690 Major Facilitator Superfamily M1S29_11205 PF00392 Bacterial regulatory proteins, gntR family M1S29_11205 PF00155 Aminotransferase class I and II M1S29_11210 PF04172 LrgB-like family M1S29_11215 PF03788 LrgA family M1S29_11220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_11220 PF03466 LysR substrate binding domain M1S29_11225 PF14834 Glutathione S-transferase, C-terminal domain M1S29_11225 PF02798 Glutathione S-transferase, N-terminal domain M1S29_11230 PF02798 Glutathione S-transferase, N-terminal domain M1S29_11235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_11235 PF03466 LysR substrate binding domain M1S29_11245 PF00581 Rhodanese-like domain M1S29_11260 PF00266 Aminotransferase class-V M1S29_11270 PF01810 LysE type translocator M1S29_11275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_11275 PF03466 LysR substrate binding domain M1S29_11285 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S29_11290 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S29_11295 PF00005 ABC transporter M1S29_11300 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_11305 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_11320 PF00072 Response regulator receiver domain M1S29_11325 PF00072 Response regulator receiver domain M1S29_11325 PF09308 LuxQ, periplasmic M1S29_11325 PF00512 His Kinase A (phospho-acceptor) domain M1S29_11325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_11335 PF13404 AsnC-type helix-turn-helix domain M1S29_11335 PF01037 Lrp/AsnC ligand binding domain M1S29_11345 PF00717 Peptidase S24-like M1S29_11370 PF00199 Catalase M1S29_11370 PF06628 Catalase-related immune-responsive M1S29_11370 PF18011 C-terminal domain found in long catalases M1S29_11380 PF00994 Probable molybdopterin binding domain M1S29_11380 PF18146 Damage-inducible protein CinA KH domain M1S29_11380 PF02464 Competence-damaged protein M1S29_11415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_11415 PF03466 LysR substrate binding domain M1S29_11435 PF00501 AMP-binding enzyme M1S29_11435 PF13193 AMP-binding enzyme C-terminal domain M1S29_11440 PF00440 Bacterial regulatory proteins, tetR family M1S29_11445 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_11445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_11445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_11450 PF01039 Carboxyl transferase domain M1S29_11455 PF00378 Enoyl-CoA hydratase/isomerase M1S29_11460 PF00289 Biotin carboxylase, N-terminal domain M1S29_11460 PF00364 Biotin-requiring enzyme M1S29_11460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S29_11460 PF18140 Propionyl-coenzyme A carboxylase BT domain M1S29_11460 PF02785 Biotin carboxylase C-terminal domain M1S29_11465 PF00682 HMGL-like M1S29_11470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_11470 PF03466 LysR substrate binding domain M1S29_11485 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S29_11485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_11485 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_11485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_11495 PF07690 Major Facilitator Superfamily M1S29_11505 PF01144 Coenzyme A transferase M1S29_11515 PF07690 Major Facilitator Superfamily M1S29_11520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_11520 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_11520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_11525 PF00378 Enoyl-CoA hydratase/isomerase M1S29_11535 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S29_11535 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S29_11535 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S29_11540 PF02803 Thiolase, C-terminal domain M1S29_11540 PF00108 Thiolase, N-terminal domain M1S29_11545 PF09339 IclR helix-turn-helix domain M1S29_11550 PF07690 Major Facilitator Superfamily M1S29_11555 PF03060 Nitronate monooxygenase M1S29_11560 PF00378 Enoyl-CoA hydratase/isomerase M1S29_11565 PF09339 IclR helix-turn-helix domain M1S29_11570 PF02515 CoA-transferase family III M1S29_11575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_11575 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_11575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_11580 PF07690 Major Facilitator Superfamily M1S29_11585 PF13419 Haloacid dehalogenase-like hydrolase M1S29_11590 PF00266 Aminotransferase class-V M1S29_11595 PF01266 FAD dependent oxidoreductase M1S29_11600 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_11605 PF00005 ABC transporter M1S29_11605 PF08402 TOBE domain M1S29_11615 PF00392 Bacterial regulatory proteins, gntR family M1S29_11615 PF07702 UTRA domain M1S29_11620 PF01494 FAD binding domain M1S29_11625 PF01614 Bacterial transcriptional regulator M1S29_11625 PF09339 IclR helix-turn-helix domain M1S29_11630 PF02525 Flavodoxin-like fold M1S29_11635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_11635 PF03466 LysR substrate binding domain M1S29_11640 PF02627 Carboxymuconolactone decarboxylase family M1S29_11645 PF00171 Aldehyde dehydrogenase family M1S29_11655 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S29_11665 PF00171 Aldehyde dehydrogenase family M1S29_11670 PF00296 Luciferase-like monooxygenase M1S29_11675 PF01613 Flavin reductase like domain M1S29_11680 PF12697 Alpha/beta hydrolase family M1S29_11700 PF01292 Prokaryotic cytochrome b561 M1S29_11705 PF00199 Catalase M1S29_11740 PF03061 Thioesterase superfamily M1S29_11745 PF00132 Bacterial transferase hexapeptide (six repeats) M1S29_11750 PF07848 PaaX-like protein M1S29_11750 PF08223 PaaX-like protein C-terminal domain M1S29_11755 PF14535 AMP-binding enzyme C-terminal domain M1S29_11755 PF00501 AMP-binding enzyme M1S29_11760 PF02803 Thiolase, C-terminal domain M1S29_11760 PF00108 Thiolase, N-terminal domain M1S29_11765 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S29_11765 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S29_11765 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S29_11770 PF00378 Enoyl-CoA hydratase/isomerase M1S29_11775 PF00378 Enoyl-CoA hydratase/isomerase M1S29_11780 PF00970 Oxidoreductase FAD-binding domain M1S29_11780 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S29_11780 PF00175 Oxidoreductase NAD-binding domain M1S29_11785 PF01883 Iron-sulfur cluster assembly protein M1S29_11790 PF05138 Phenylacetic acid catabolic protein M1S29_11795 PF06243 Phenylacetic acid degradation B M1S29_11800 PF05138 Phenylacetic acid catabolic protein M1S29_11805 PF00171 Aldehyde dehydrogenase family M1S29_11805 PF01575 MaoC like domain M1S29_11810 PF03315 Serine dehydratase beta chain M1S29_11810 PF03313 Serine dehydratase alpha chain M1S29_11815 PF13520 Amino acid permease M1S29_11820 PF00171 Aldehyde dehydrogenase family M1S29_11825 PF00083 Sugar (and other) transporter M1S29_11835 PF04324 BFD-like [2Fe-2S] binding domain M1S29_11835 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_11845 PF01266 FAD dependent oxidoreductase M1S29_11850 PF05544 Proline racemase M1S29_11855 PF00392 Bacterial regulatory proteins, gntR family M1S29_11865 PF00701 Dihydrodipicolinate synthetase family M1S29_11875 PF09278 MerR, DNA binding M1S29_11875 PF00376 MerR family regulatory protein M1S29_11890 PF02677 Epoxyqueuosine reductase QueH M1S29_11905 PF07690 Major Facilitator Superfamily M1S29_11910 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S29_11920 PF03466 LysR substrate binding domain M1S29_11920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_11940 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M1S29_11945 PF06812 ImpA, N-terminal, type VI secretion system M1S29_11950 PF17871 AAA lid domain M1S29_11950 PF10431 C-terminal, D2-small domain, of ClpB protein M1S29_11950 PF00004 ATPase family associated with various cellular activities (AAA) M1S29_11950 PF07724 AAA domain (Cdc48 subfamily) M1S29_11965 PF00691 OmpA family M1S29_11965 PF01389 OmpA-like transmembrane domain M1S29_11975 PF06761 Intracellular multiplication and human macrophage-killing M1S29_11975 PF14331 ImcF-related N-terminal domain M1S29_11975 PF06744 Type VI secretion protein IcmF C-terminal M1S29_11990 PF05947 Type VI secretion system, TssF M1S29_12005 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M1S29_12030 PF00005 ABC transporter M1S29_12035 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S29_12040 PF01425 Amidase M1S29_12045 PF08753 NikR C terminal nickel binding domain M1S29_12045 PF01402 Ribbon-helix-helix protein, copG family M1S29_12065 PF02525 Flavodoxin-like fold M1S29_12070 PF02785 Biotin carboxylase C-terminal domain M1S29_12070 PF00289 Biotin carboxylase, N-terminal domain M1S29_12070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S29_12085 PF13823 Alcohol dehydrogenase GroES-associated M1S29_12085 PF00107 Zinc-binding dehydrogenase M1S29_12085 PF08240 Alcohol dehydrogenase GroES-like domain M1S29_12095 PF00440 Bacterial regulatory proteins, tetR family M1S29_12115 PF00654 Voltage gated chloride channel M1S29_12120 PF00364 Biotin-requiring enzyme M1S29_12120 PF02785 Biotin carboxylase C-terminal domain M1S29_12120 PF00289 Biotin carboxylase, N-terminal domain M1S29_12120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S29_12130 PF07286 Protein of unknown function (DUF1445) M1S29_12135 PF03746 LamB/YcsF family M1S29_12140 PF01566 Natural resistance-associated macrophage protein M1S29_12145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_12145 PF03466 LysR substrate binding domain M1S29_12160 PF05593 RHS Repeat M1S29_12160 PF03527 RHS protein M1S29_12165 PF13296 Putative type VI secretion system Rhs element Vgr M1S29_12165 PF04717 Type VI secretion system, phage-baseplate injector M1S29_12165 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S29_12175 PF13419 Haloacid dehalogenase-like hydrolase M1S29_12195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S29_12195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S29_12215 PF07690 Major Facilitator Superfamily M1S29_12230 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S29_12235 PF00990 Diguanylate cyclase, GGDEF domain M1S29_12235 PF00563 EAL domain M1S29_12235 PF03707 Bacterial signalling protein N terminal repeat M1S29_12240 PF00892 EamA-like transporter family M1S29_12245 PF01037 Lrp/AsnC ligand binding domain M1S29_12250 PF01624 MutS domain I M1S29_12250 PF05188 MutS domain II M1S29_12250 PF05190 MutS family domain IV M1S29_12250 PF00488 MutS domain V M1S29_12250 PF05192 MutS domain III M1S29_12260 PF11953 Domain of unknown function (DUF3470) M1S29_12260 PF00037 4Fe-4S binding domain M1S29_12270 PF01596 O-methyltransferase M1S29_12280 PF00132 Bacterial transferase hexapeptide (six repeats) M1S29_12285 PF01205 Uncharacterized protein family UPF0029 M1S29_12295 PF00005 ABC transporter M1S29_12295 PF00664 ABC transporter transmembrane region M1S29_12295 PF03412 Peptidase C39 family M1S29_12300 PF02321 Outer membrane efflux protein M1S29_12305 PF00005 ABC transporter M1S29_12305 PF12399 Branched-chain amino acid ATP-binding cassette transporter M1S29_12310 PF03968 OstA-like protein M1S29_12325 PF00571 CBS domain M1S29_12325 PF01380 SIS domain M1S29_12330 PF09190 DALR domain M1S29_12330 PF01406 tRNA synthetases class I (C) catalytic domain M1S29_12355 PF01638 HxlR-like helix-turn-helix M1S29_12360 PF07690 Major Facilitator Superfamily M1S29_12385 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S29_12385 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S29_12395 PF00313 'Cold-shock' DNA-binding domain M1S29_12400 PF01810 LysE type translocator M1S29_12430 PF13742 OB-fold nucleic acid binding domain M1S29_12430 PF02601 Exonuclease VII, large subunit M1S29_12465 PF09278 MerR, DNA binding M1S29_12465 PF00376 MerR family regulatory protein M1S29_12470 PF00403 Heavy-metal-associated domain M1S29_12475 PF00403 Heavy-metal-associated domain M1S29_12480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_12480 PF03466 LysR substrate binding domain M1S29_12490 PF00355 Rieske [2Fe-2S] domain M1S29_12490 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S29_12495 PF00866 Ring hydroxylating beta subunit M1S29_12500 PF00970 Oxidoreductase FAD-binding domain M1S29_12500 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S29_12500 PF00175 Oxidoreductase NAD-binding domain M1S29_12505 PF00106 short chain dehydrogenase M1S29_12510 PF03594 Benzoate membrane transport protein M1S29_12515 PF07690 Major Facilitator Superfamily M1S29_12525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M1S29_12525 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M1S29_12530 PF00270 DEAD/DEAH box helicase M1S29_12530 PF11898 Domain of unknown function (DUF3418) M1S29_12530 PF04408 Helicase associated domain (HA2) M1S29_12530 PF00271 Helicase conserved C-terminal domain M1S29_12530 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M1S29_12535 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S29_12535 PF00578 AhpC/TSA family M1S29_12565 PF00043 Glutathione S-transferase, C-terminal domain M1S29_12565 PF02798 Glutathione S-transferase, N-terminal domain M1S29_12575 PF02390 Putative methyltransferase M1S29_12580 PF00043 Glutathione S-transferase, C-terminal domain M1S29_12580 PF13417 Glutathione S-transferase, N-terminal domain M1S29_12590 PF13488 Glycine zipper M1S29_12590 PF00691 OmpA family M1S29_12595 PF01979 Amidohydrolase family M1S29_12600 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S29_12600 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S29_12610 PF10672 S-adenosylmethionine-dependent methyltransferase M1S29_12610 PF02926 THUMP domain M1S29_12610 PF01170 Putative RNA methylase family UPF0020 M1S29_12625 PF17871 AAA lid domain M1S29_12625 PF02861 Clp amino terminal domain, pathogenicity island component M1S29_12625 PF10431 C-terminal, D2-small domain, of ClpB protein M1S29_12625 PF07724 AAA domain (Cdc48 subfamily) M1S29_12625 PF00004 ATPase family associated with various cellular activities (AAA) M1S29_12640 PF02566 OsmC-like protein M1S29_12650 PF00027 Cyclic nucleotide-binding domain M1S29_12650 PF13545 Crp-like helix-turn-helix domain M1S29_12660 PF00248 Aldo/keto reductase family M1S29_12675 PF00709 Adenylosuccinate synthetase M1S29_12680 PF13393 Histidyl-tRNA synthetase M1S29_12685 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S29_12685 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S29_12690 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S29_12690 PF01411 tRNA synthetases class II (A) M1S29_12690 PF02272 DHHA1 domain M1S29_12695 PF00696 Amino acid kinase family M1S29_12695 PF01842 ACT domain M1S29_12695 PF13840 ACT domain M1S29_12700 PF02599 Global regulator protein family M1S29_12705 PF01351 Ribonuclease HII M1S29_12715 PF01292 Prokaryotic cytochrome b561 M1S29_12720 PF00962 Adenosine/AMP deaminase M1S29_12725 PF00860 Permease family M1S29_12735 PF00743 Flavin-binding monooxygenase-like M1S29_12740 PF00106 short chain dehydrogenase M1S29_12750 PF02678 Pirin M1S29_12750 PF17954 Quercetinase C-terminal cupin domain M1S29_12755 PF00440 Bacterial regulatory proteins, tetR family M1S29_12755 PF17932 Tetracyclin repressor-like, C-terminal domain M1S29_12765 PF00106 short chain dehydrogenase M1S29_12775 PF13610 DDE domain M1S29_12785 PF02796 Helix-turn-helix domain of resolvase M1S29_12785 PF00239 Resolvase, N terminal domain M1S29_12790 PF00563 EAL domain M1S29_12790 PF11809 Domain of unknown function (DUF3330) M1S29_12800 PF13610 DDE domain M1S29_12805 PF01636 Phosphotransferase enzyme family M1S29_12820 PF13610 DDE domain M1S29_12825 PF00239 Resolvase, N terminal domain M1S29_12825 PF02796 Helix-turn-helix domain of resolvase M1S29_12835 PF13610 DDE domain M1S29_12845 PF00239 Resolvase, N terminal domain M1S29_12845 PF02796 Helix-turn-helix domain of resolvase M1S29_12850 PF13610 DDE domain M1S29_12860 PF04958 Arginine N-succinyltransferase beta subunit M1S29_12865 PF00202 Aminotransferase class-III M1S29_12875 PF00171 Aldehyde dehydrogenase family M1S29_12885 PF00392 Bacterial regulatory proteins, gntR family M1S29_12885 PF07729 FCD domain M1S29_12895 PF00324 Amino acid permease M1S29_12900 PF01266 FAD dependent oxidoreductase M1S29_12905 PF00324 Amino acid permease M1S29_12945 PF05593 RHS Repeat M1S29_12945 PF03527 RHS protein M1S29_12950 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S29_12950 PF04717 Type VI secretion system, phage-baseplate injector M1S29_12950 PF13296 Putative type VI secretion system Rhs element Vgr M1S29_12970 PF03180 NLPA lipoprotein M1S29_12975 PF05987 Bacterial protein of unknown function (DUF898) M1S29_12990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S29_12990 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_12995 PF00764 Arginosuccinate synthase M1S29_13000 PF00563 EAL domain M1S29_13000 PF01590 GAF domain M1S29_13000 PF00990 Diguanylate cyclase, GGDEF domain M1S29_13000 PF00360 Phytochrome region M1S29_13005 PF01979 Amidohydrolase family M1S29_13010 PF00929 Exonuclease M1S29_13020 PF07715 TonB-dependent Receptor Plug Domain M1S29_13020 PF00593 TonB dependent receptor M1S29_13025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S29_13025 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_13030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S29_13030 PF00005 ABC transporter M1S29_13035 PF12911 N-terminal TM domain of oligopeptide transport permease C M1S29_13035 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_13040 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_13045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1S29_13050 PF01464 Transglycosylase SLT domain M1S29_13050 PF01476 LysM domain M1S29_13050 PF01476 LysM domain M1S29_13050 PF01464 Transglycosylase SLT domain M1S29_13055 PF00929 Exonuclease M1S29_13065 PF00293 NUDIX domain M1S29_13065 PF09297 NADH pyrophosphatase zinc ribbon domain M1S29_13075 PF04972 BON domain M1S29_13080 PF02021 Uncharacterised protein family UPF0102 M1S29_13085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S29_13095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_13095 PF03466 LysR substrate binding domain M1S29_13100 PF01810 LysE type translocator M1S29_13110 PF13411 MerR HTH family regulatory protein M1S29_13120 PF01494 FAD binding domain M1S29_13125 PF01494 FAD binding domain M1S29_13130 PF05195 Aminopeptidase P, N-terminal domain M1S29_13130 PF00557 Metallopeptidase family M24 M1S29_13215 PF10145 Phage-related minor tail protein M1S29_13215 PF01551 Peptidase family M23 M1S29_13215 PF01464 Transglycosylase SLT domain M1S29_13275 PF04860 Phage portal protein M1S29_13375 PF03796 DnaB-like helicase C terminal domain M1S29_13375 PF00772 DnaB-like helicase N terminal domain M1S29_13395 PF01726 LexA DNA binding domain M1S29_13395 PF00717 Peptidase S24-like M1S29_13495 PF01551 Peptidase family M23 M1S29_13495 PF08525 Opacity-associated protein A N-terminal motif M1S29_13495 PF01476 LysM domain M1S29_13820 PF01812 5-formyltetrahydrofolate cyclo-ligase family M1S29_13825 PF00691 OmpA family M1S29_13825 PF04355 SmpA / OmlA family M1S29_13830 PF13018 Extended Signal Peptide of Type V secretion system M1S29_13830 PF05662 Coiled stalk of trimeric autotransporter adhesin M1S29_13830 PF05658 Head domain of trimeric autotransporter adhesin M1S29_13830 PF03895 YadA-like membrane anchor domain M1S29_13835 PF02190 ATP-dependent protease La (LON) substrate-binding domain M1S29_13835 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S29_13835 PF00004 ATPase family associated with various cellular activities (AAA) M1S29_13840 PF02590 Predicted SPOUT methyltransferase M1S29_13845 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M1S29_13855 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S29_13855 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S29_13860 PF04060 Putative Fe-S cluster M1S29_13865 PF00633 Helix-hairpin-helix motif M1S29_13865 PF10576 Iron-sulfur binding domain of endonuclease III M1S29_13865 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S29_13875 PF05191 Adenylate kinase, active site lid M1S29_13890 PF03717 Penicillin-binding Protein dimerisation domain M1S29_13890 PF00905 Penicillin binding protein transpeptidase domain M1S29_13905 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S29_13910 PF01730 UreF M1S29_13915 PF02814 UreE urease accessory protein, N-terminal domain M1S29_13915 PF05194 UreE urease accessory protein, C-terminal domain M1S29_13920 PF00449 Urease alpha-subunit, N-terminal domain M1S29_13920 PF01979 Amidohydrolase family M1S29_13925 PF00699 Urease beta subunit M1S29_13930 PF00547 Urease, gamma subunit M1S29_13935 PF01774 UreD urease accessory protein M1S29_13950 PF00463 Isocitrate lyase family M1S29_13955 PF03466 LysR substrate binding domain M1S29_13955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_13960 PF00571 CBS domain M1S29_13960 PF01595 Cyclin M transmembrane N-terminal domain M1S29_13960 PF03471 Transporter associated domain M1S29_13965 PF03600 Citrate transporter M1S29_13980 PF00009 Elongation factor Tu GTP binding domain M1S29_13985 PF01507 Phosphoadenosine phosphosulfate reductase family M1S29_13995 PF14052 Capsule assembly protein Wzi M1S29_14000 PF01336 OB-fold nucleic acid binding domain M1S29_14000 PF00152 tRNA synthetases class II (D, K and N) M1S29_14015 PF00301 Rubredoxin M1S29_14020 PF18113 Rubredoxin binding C-terminal domain M1S29_14020 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_14025 PF00561 alpha/beta hydrolase fold M1S29_14030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_14030 PF03466 LysR substrate binding domain M1S29_14040 PF13090 Polyphosphate kinase C-terminal domain 2 M1S29_14040 PF17941 Polyphosphate kinase C-terminal domain 1 M1S29_14040 PF13089 Polyphosphate kinase N-terminal domain M1S29_14040 PF02503 Polyphosphate kinase middle domain M1S29_14045 PF00912 Transglycosylase M1S29_14050 PF01694 Rhomboid family M1S29_14060 PF00005 ABC transporter M1S29_14065 PF13472 GDSL-like Lipase/Acylhydrolase family M1S29_14070 PF00484 Carbonic anhydrase M1S29_14075 PF00561 alpha/beta hydrolase fold M1S29_14085 PF00593 TonB dependent receptor M1S29_14085 PF07715 TonB-dependent Receptor Plug Domain M1S29_14090 PF01521 Iron-sulphur cluster biosynthesis M1S29_14090 PF01106 NifU-like domain M1S29_14100 PF00884 Sulfatase M1S29_14105 PF03781 Sulfatase-modifying factor enzyme 1 M1S29_14120 PF00291 Pyridoxal-phosphate dependent enzyme M1S29_14125 PF01384 Phosphate transporter family M1S29_14130 PF02574 Homocysteine S-methyltransferase M1S29_14130 PF02965 Vitamin B12 dependent methionine synthase, activation domain M1S29_14130 PF00809 Pterin binding enzyme M1S29_14130 PF02310 B12 binding domain M1S29_14130 PF02607 B12 binding domain M1S29_14145 PF07690 Major Facilitator Superfamily M1S29_14155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_14155 PF03466 LysR substrate binding domain M1S29_14165 PF01263 Aldose 1-epimerase M1S29_14170 PF07690 Major Facilitator Superfamily M1S29_14175 PF12833 Helix-turn-helix domain M1S29_14175 PF02311 AraC-like ligand binding domain M1S29_14180 PF04960 Glutaminase M1S29_14185 PF01327 Polypeptide deformylase M1S29_14190 PF07690 Major Facilitator Superfamily M1S29_14200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S29_14200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S29_14200 PF00205 Thiamine pyrophosphate enzyme, central domain M1S29_14205 PF00171 Aldehyde dehydrogenase family M1S29_14210 PF01958 Domain of unknown function DUF108 M1S29_14210 PF03447 Homoserine dehydrogenase, NAD binding domain M1S29_14220 PF12697 Alpha/beta hydrolase family M1S29_14230 PF07690 Major Facilitator Superfamily M1S29_14235 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_14235 PF14759 Reductase C-terminal M1S29_14240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S29_14250 PF00355 Rieske [2Fe-2S] domain M1S29_14260 PF00355 Rieske [2Fe-2S] domain M1S29_14265 PF01614 Bacterial transcriptional regulator M1S29_14265 PF09339 IclR helix-turn-helix domain M1S29_14280 PF00378 Enoyl-CoA hydratase/isomerase M1S29_14290 PF00535 Glycosyl transferase family 2 M1S29_14295 PF14883 Hypothetical glycosyl hydrolase family 13 M1S29_14295 PF01522 Polysaccharide deacetylase M1S29_14300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S29_14305 PF07152 YaeQ protein M1S29_14310 PF00375 Sodium:dicarboxylate symporter family M1S29_14315 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S29_14315 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S29_14325 PF03061 Thioesterase superfamily M1S29_14335 PF02028 BCCT, betaine/carnitine/choline family transporter M1S29_14340 PF02028 BCCT, betaine/carnitine/choline family transporter M1S29_14345 PF13977 BetI-type transcriptional repressor, C-terminal M1S29_14345 PF00440 Bacterial regulatory proteins, tetR family M1S29_14350 PF00171 Aldehyde dehydrogenase family M1S29_14355 PF05199 GMC oxidoreductase M1S29_14355 PF00732 GMC oxidoreductase M1S29_14360 PF06039 Malate:quinone oxidoreductase (Mqo) M1S29_14370 PF02574 Homocysteine S-methyltransferase M1S29_14375 PF13520 Amino acid permease M1S29_14400 PF00701 Dihydrodipicolinate synthetase family M1S29_14405 PF00083 Sugar (and other) transporter M1S29_14490 PF10544 T5orf172 domain M1S29_14495 PF13614 AAA domain M1S29_14515 PF00905 Penicillin binding protein transpeptidase domain M1S29_14535 PF10544 T5orf172 domain M1S29_14540 PF13614 AAA domain M1S29_14560 PF00905 Penicillin binding protein transpeptidase domain M1S29_14585 PF10544 T5orf172 domain M1S29_14590 PF13614 AAA domain M1S29_14610 PF00905 Penicillin binding protein transpeptidase domain M1S29_14630 PF10544 T5orf172 domain M1S29_14635 PF13614 AAA domain M1S29_14655 PF00905 Penicillin binding protein transpeptidase domain M1S29_14675 PF10544 T5orf172 domain M1S29_14680 PF13614 AAA domain M1S29_14700 PF00905 Penicillin binding protein transpeptidase domain M1S29_14780 PF02767 DNA polymerase III beta subunit, central domain M1S29_14780 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S29_14780 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S29_14820 PF05016 ParE toxin of type II toxin-antitoxin system, parDE M1S29_14970 PF07007 Lysozyme inhibitor LprI M1S29_15015 PF01695 IstB-like ATP binding protein M1S29_15025 PF00145 C-5 cytosine-specific DNA methylase M1S29_15070 PF01381 Helix-turn-helix M1S29_15070 PF00717 Peptidase S24-like M1S29_15105 PF00929 Exonuclease M1S29_15180 PF07690 Major Facilitator Superfamily M1S29_15185 PF13533 Biotin-lipoyl like M1S29_15190 PF03061 Thioesterase superfamily M1S29_15195 PF00490 Delta-aminolevulinic acid dehydratase M1S29_15200 PF01266 FAD dependent oxidoreductase M1S29_15205 PF08338 Domain of unknown function (DUF1731) M1S29_15205 PF01370 NAD dependent epimerase/dehydratase family M1S29_15225 PF12320 Type 5 capsule protein repressor C-terminal domain M1S29_15225 PF00149 Calcineurin-like phosphoesterase M1S29_15235 PF01168 Alanine racemase, N-terminal domain M1S29_15240 PF00437 Type II/IV secretion system protein M1S29_15245 PF00437 Type II/IV secretion system protein M1S29_15250 PF01475 Ferric uptake regulator family M1S29_15255 PF04355 SmpA / OmlA family M1S29_15260 PF03658 RnfH family Ubiquitin M1S29_15270 PF01814 Hemerythrin HHE cation binding domain M1S29_15275 PF13230 Glutamine amidotransferases class-II M1S29_15285 PF00696 Amino acid kinase family M1S29_15290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S29_15290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S29_15290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S29_15290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S29_15295 PF00692 dUTPase M1S29_15300 PF13361 UvrD-like helicase C-terminal domain M1S29_15300 PF00580 UvrD/REP helicase N-terminal domain M1S29_15305 PF00691 OmpA family M1S29_15305 PF13488 Glycine zipper M1S29_15310 PF01553 Acyltransferase M1S29_15320 PF03775 Septum formation inhibitor MinC, C-terminal domain M1S29_15325 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M1S29_15330 PF03776 Septum formation topological specificity factor MinE M1S29_15345 PF01810 LysE type translocator M1S29_15350 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M1S29_15350 PF17854 FtsK alpha domain M1S29_15350 PF09397 Ftsk gamma domain M1S29_15350 PF01580 FtsK/SpoIIIE family M1S29_15355 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S29_15360 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M1S29_15365 PF04377 Arginine-tRNA-protein transferase, C terminus M1S29_15365 PF04376 Arginine-tRNA-protein transferase, N terminus M1S29_15370 PF00583 Acetyltransferase (GNAT) family M1S29_15385 PF03143 Elongation factor Tu C-terminal domain M1S29_15385 PF03144 Elongation factor Tu domain 2 M1S29_15385 PF00009 Elongation factor Tu GTP binding domain M1S29_15390 PF14492 Elongation Factor G, domain II M1S29_15390 PF03764 Elongation factor G, domain IV M1S29_15390 PF00009 Elongation factor Tu GTP binding domain M1S29_15390 PF03144 Elongation factor Tu domain 2 M1S29_15390 PF00679 Elongation factor G C-terminus M1S29_15395 PF00177 Ribosomal protein S7p/S5e M1S29_15400 PF00164 Ribosomal protein S12/S23 M1S29_15410 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S29_15410 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S29_15415 PF03653 Uncharacterised protein family (UPF0093) M1S29_15420 PF05726 Pirin C-terminal cupin domain M1S29_15420 PF02678 Pirin M1S29_15430 PF00795 Carbon-nitrogen hydrolase M1S29_15430 PF02540 NAD synthase M1S29_15445 PF00175 Oxidoreductase NAD-binding domain M1S29_15445 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S29_15445 PF00970 Oxidoreductase FAD-binding domain M1S29_15450 PF00171 Aldehyde dehydrogenase family M1S29_15455 PF00355 Rieske [2Fe-2S] domain M1S29_15455 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S29_15460 PF07859 alpha/beta hydrolase fold M1S29_15465 PF02028 BCCT, betaine/carnitine/choline family transporter M1S29_15470 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S29_15475 PF03466 LysR substrate binding domain M1S29_15475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_15495 PF00037 4Fe-4S binding domain M1S29_15500 PF01467 Cytidylyltransferase-like M1S29_15505 PF01668 SmpB protein M1S29_15510 PF03358 NADPH-dependent FMN reductase M1S29_15515 PF02578 Multi-copper polyphenol oxidoreductase laccase M1S29_15520 PF01479 S4 domain M1S29_15520 PF00849 RNA pseudouridylate synthase M1S29_15525 PF13525 Outer membrane lipoprotein M1S29_15530 PF08275 DNA primase catalytic core, N-terminal domain M1S29_15530 PF01807 CHC2 zinc finger M1S29_15530 PF08278 DNA primase DnaG DnaB-binding M1S29_15530 PF10410 DnaB-helicase binding domain of primase M1S29_15535 PF01488 Shikimate / quinate 5-dehydrogenase M1S29_15535 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M1S29_15535 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M1S29_15545 PF03550 Outer membrane lipoprotein LolB M1S29_15550 PF08544 GHMP kinases C terminal M1S29_15550 PF00288 GHMP kinases N terminal domain M1S29_15575 PF14572 Phosphoribosyl synthetase-associated domain M1S29_15575 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S29_15580 PF01386 Ribosomal L25p family M1S29_15585 PF01195 Peptidyl-tRNA hydrolase M1S29_15590 PF02261 Aspartate decarboxylase M1S29_15605 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S29_15615 PF02581 Thiamine monophosphate synthase M1S29_15615 PF03070 TENA/THI-4/PQQC family M1S29_15615 PF08543 Phosphomethylpyrimidine kinase M1S29_15620 PF01476 LysM domain M1S29_15620 PF04972 BON domain M1S29_15625 PF00550 Phosphopantetheine attachment site M1S29_15635 PF00698 Acyl transferase domain M1S29_15640 PF01783 Ribosomal L32p protein family M1S29_15645 PF02620 Large ribosomal RNA subunit accumulation protein YceD M1S29_15650 PF04315 Elongation factor P hydroxylase M1S29_15655 PF01300 Telomere recombination M1S29_15660 PF02616 Segregation and condensation protein ScpA M1S29_15665 PF04079 Segregation and condensation complex subunit ScpB M1S29_15670 PF00849 RNA pseudouridylate synthase M1S29_15670 PF01479 S4 domain M1S29_15685 PF00155 Aminotransferase class I and II M1S29_15690 PF00202 Aminotransferase class-III M1S29_15690 PF06968 Biotin and Thiamin Synthesis associated domain M1S29_15690 PF04055 Radical SAM superfamily M1S29_15695 PF08241 Methyltransferase domain M1S29_15695 PF12697 Alpha/beta hydrolase family M1S29_15700 PF02358 Trehalose-phosphatase M1S29_15705 PF00982 Glycosyltransferase family 20 M1S29_15710 PF07690 Major Facilitator Superfamily M1S29_15715 PF00210 Ferritin-like domain M1S29_15720 PF03120 NAD-dependent DNA ligase OB-fold domain M1S29_15720 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M1S29_15720 PF12826 Helix-hairpin-helix motif M1S29_15720 PF00533 BRCA1 C Terminus (BRCT) domain M1S29_15720 PF01653 NAD-dependent DNA ligase adenylation domain M1S29_15730 PF02463 RecF/RecN/SMC N terminal domain M1S29_15730 PF06470 SMC proteins Flexible Hinge Domain M1S29_15740 PF01925 Sulfite exporter TauE/SafE M1S29_15750 PF03309 Type III pantothenate kinase M1S29_15755 PF00448 SRP54-type protein, GTPase domain M1S29_15755 PF02881 SRP54-type protein, helical bundle domain M1S29_15755 PF02978 Signal peptide binding domain M1S29_15765 PF01207 Dihydrouridine synthase (Dus) M1S29_15795 PF00692 dUTPase M1S29_15810 PF01048 Phosphorylase superfamily M1S29_15815 PF10609 NUBPL iron-transfer P-loop NTPase M1S29_15825 PF09334 tRNA synthetases class I (M) M1S29_15825 PF01588 Putative tRNA binding domain M1S29_15850 PF13533 Biotin-lipoyl like M1S29_15855 PF00291 Pyridoxal-phosphate dependent enzyme M1S29_15870 PF05552 Conserved TM helix M1S29_15885 PF00175 Oxidoreductase NAD-binding domain M1S29_15885 PF00970 Oxidoreductase FAD-binding domain M1S29_15890 PF03466 LysR substrate binding domain M1S29_15890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_15895 PF00313 'Cold-shock' DNA-binding domain M1S29_15905 PF00361 Proton-conducting membrane transporter M1S29_15910 PF00361 Proton-conducting membrane transporter M1S29_15915 PF00361 Proton-conducting membrane transporter M1S29_15915 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S29_15920 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S29_15925 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M1S29_15930 PF12838 4Fe-4S dicluster domain M1S29_15935 PF00146 NADH dehydrogenase M1S29_15940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S29_15940 PF00384 Molybdopterin oxidoreductase M1S29_15940 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M1S29_15945 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M1S29_15945 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M1S29_15945 PF10531 SLBB domain M1S29_15955 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M1S29_15955 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M1S29_15960 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M1S29_15965 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M1S29_15970 PF17151 Periplasmic sensor domain M1S29_15970 PF00990 Diguanylate cyclase, GGDEF domain M1S29_15980 PF00512 His Kinase A (phospho-acceptor) domain M1S29_15980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_15980 PF00672 HAMP domain M1S29_15985 PF00486 Transcriptional regulatory protein, C terminal M1S29_15985 PF00072 Response regulator receiver domain M1S29_15995 PF03477 ATP cone domain M1S29_15995 PF02867 Ribonucleotide reductase, barrel domain M1S29_15995 PF00317 Ribonucleotide reductase, all-alpha domain M1S29_16005 PF00268 Ribonucleotide reductase, small chain M1S29_16015 PF00672 HAMP domain M1S29_16015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_16015 PF00512 His Kinase A (phospho-acceptor) domain M1S29_16015 PF13756 Stimulus-sensing domain M1S29_16015 PF13755 Sensor N-terminal transmembrane domain M1S29_16085 PF13360 PQQ-like domain M1S29_16085 PF01011 PQQ enzyme repeat M1S29_16110 PF02567 Phenazine biosynthesis-like protein M1S29_16135 PF01613 Flavin reductase like domain M1S29_16140 PF08267 Cobalamin-independent synthase, N-terminal domain M1S29_16140 PF01717 Cobalamin-independent synthase, Catalytic domain M1S29_16150 PF03466 LysR substrate binding domain M1S29_16150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_16155 PF01810 LysE type translocator M1S29_16165 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S29_16165 PF12833 Helix-turn-helix domain M1S29_16170 PF07687 Peptidase dimerisation domain M1S29_16170 PF01546 Peptidase family M20/M25/M40 M1S29_16180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_16180 PF03466 LysR substrate binding domain M1S29_16185 PF07690 Major Facilitator Superfamily M1S29_16195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_16195 PF03466 LysR substrate binding domain M1S29_16200 PF00890 FAD binding domain M1S29_16200 PF14537 Cytochrome c3 M1S29_16210 PF02515 CoA-transferase family III M1S29_16215 PF07690 Major Facilitator Superfamily M1S29_16220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_16220 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_16220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_16225 PF03466 LysR substrate binding domain M1S29_16225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_16230 PF00107 Zinc-binding dehydrogenase M1S29_16230 PF08240 Alcohol dehydrogenase GroES-like domain M1S29_16235 PF00962 Adenosine/AMP deaminase M1S29_16260 PF02445 Quinolinate synthetase A protein M1S29_16265 PF01960 ArgJ family M1S29_16270 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S29_16270 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S29_16275 PF00893 Small Multidrug Resistance protein M1S29_16285 PF05275 Copper resistance protein B precursor (CopB) M1S29_16290 PF00394 Multicopper oxidase M1S29_16290 PF07732 Multicopper oxidase M1S29_16290 PF07731 Multicopper oxidase M1S29_16305 PF00834 Ribulose-phosphate 3 epimerase family M1S29_16315 PF00756 Putative esterase M1S29_16325 PF04445 Putative SAM-dependent methyltransferase M1S29_16330 PF00814 Glycoprotease family M1S29_16335 PF00132 Bacterial transferase hexapeptide (six repeats) M1S29_16340 PF00293 NUDIX domain M1S29_16380 PF04715 Anthranilate synthase component I, N terminal region M1S29_16380 PF00425 chorismate binding enzyme M1S29_16385 PF00155 Aminotransferase class I and II M1S29_16390 PF00815 Histidinol dehydrogenase M1S29_16395 PF01634 ATP phosphoribosyltransferase M1S29_16400 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S29_16405 PF01722 BolA-like protein M1S29_16410 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M1S29_16415 PF04552 Sigma-54, DNA binding domain M1S29_16415 PF04963 Sigma-54 factor, core binding domain M1S29_16415 PF00309 Sigma-54 factor, Activator interacting domain (AID) M1S29_16460 PF00795 Carbon-nitrogen hydrolase M1S29_16470 PF01047 MarR family M1S29_16475 PF02566 OsmC-like protein M1S29_16480 PF00437 Type II/IV secretion system protein M1S29_16500 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S29_16500 PF00476 DNA polymerase family A M1S29_16500 PF01612 3'-5' exonuclease M1S29_16500 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S29_16505 PF02325 YGGT family M1S29_16515 PF09179 TilS substrate binding domain M1S29_16515 PF11734 TilS substrate C-terminal domain M1S29_16515 PF01171 PP-loop family M1S29_16520 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M1S29_16525 PF02541 Ppx/GppA phosphatase family M1S29_16530 PF00085 Thioredoxin M1S29_16535 PF07497 Rho termination factor, RNA-binding domain M1S29_16535 PF07498 Rho termination factor, N-terminal domain M1S29_16535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S29_16550 PF00216 Bacterial DNA-binding protein M1S29_16555 PF03147 Ferredoxin-fold anticodon binding domain M1S29_16555 PF01588 Putative tRNA binding domain M1S29_16555 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M1S29_16555 PF03484 tRNA synthetase B5 domain M1S29_16555 PF03483 B3/4 domain M1S29_16560 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M1S29_16560 PF01409 tRNA synthetases class II core domain (F) M1S29_16580 PF00453 Ribosomal protein L20 M1S29_16585 PF01632 Ribosomal protein L35 M1S29_16595 PF07690 Major Facilitator Superfamily M1S29_16600 PF09335 SNARE associated Golgi protein M1S29_16605 PF02798 Glutathione S-transferase, N-terminal domain M1S29_16605 PF00043 Glutathione S-transferase, C-terminal domain M1S29_16610 PF00707 Translation initiation factor IF-3, C-terminal domain M1S29_16610 PF05198 Translation initiation factor IF-3, N-terminal domain M1S29_16615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S29_16615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S29_16615 PF03129 Anticodon binding domain M1S29_16615 PF02824 TGS domain M1S29_16620 PF13193 AMP-binding enzyme C-terminal domain M1S29_16620 PF00501 AMP-binding enzyme M1S29_16625 PF04751 Protein of unknown function (DUF615) M1S29_16630 PF00381 PTS HPr component phosphorylation site M1S29_16635 PF03668 P-loop ATPase protein family M1S29_16640 PF02569 Pantoate-beta-alanine ligase M1S29_16645 PF02548 Ketopantoate hydroxymethyltransferase M1S29_16650 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M1S29_16655 PF01743 Poly A polymerase head domain M1S29_16655 PF12626 Polymerase A arginine-rich C-terminus M1S29_16655 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S29_16665 PF03819 MazG nucleotide pyrophosphohydrolase domain M1S29_16675 PF13291 ACT domain M1S29_16675 PF04607 Region found in RelA / SpoT proteins M1S29_16675 PF02824 TGS domain M1S29_16680 PF05958 tRNA (Uracil-5-)-methyltransferase M1S29_16690 PF00291 Pyridoxal-phosphate dependent enzyme M1S29_16695 PF00512 His Kinase A (phospho-acceptor) domain M1S29_16695 PF01627 Hpt domain M1S29_16695 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M1S29_16695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_16695 PF00072 Response regulator receiver domain M1S29_16695 PF00672 HAMP domain M1S29_16700 PF00378 Enoyl-CoA hydratase/isomerase M1S29_16705 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S29_16705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S29_16710 PF01261 Xylose isomerase-like TIM barrel M1S29_16720 PF00106 short chain dehydrogenase M1S29_16725 PF02233 NAD(P) transhydrogenase beta subunit M1S29_16730 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M1S29_16735 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M1S29_16735 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M1S29_16740 PF00892 EamA-like transporter family M1S29_16750 PF07690 Major Facilitator Superfamily M1S29_16755 PF01207 Dihydrouridine synthase (Dus) M1S29_16765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_16765 PF03466 LysR substrate binding domain M1S29_16775 PF00899 ThiF family M1S29_16785 PF00694 Aconitase C-terminal domain M1S29_16785 PF00330 Aconitase family (aconitate hydratase) M1S29_16790 PF01026 TatD related DNase M1S29_16805 PF03144 Elongation factor Tu domain 2 M1S29_16805 PF16658 Class II release factor RF3, C-terminal domain M1S29_16805 PF00009 Elongation factor Tu GTP binding domain M1S29_16825 PF00563 EAL domain M1S29_16825 PF03707 Bacterial signalling protein N terminal repeat M1S29_16825 PF00990 Diguanylate cyclase, GGDEF domain M1S29_16830 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M1S29_16830 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M1S29_16835 PF10369 Small subunit of acetolactate synthase M1S29_16840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S29_16840 PF00205 Thiamine pyrophosphate enzyme, central domain M1S29_16840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S29_16850 PF09334 tRNA synthetases class I (M) M1S29_16850 PF13603 Leucyl-tRNA synthetase, Domain 2 M1S29_16850 PF00133 tRNA synthetases class I (I, L, M and V) M1S29_16850 PF08264 Anticodon-binding domain of tRNA M1S29_16865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S29_16870 PF00005 ABC transporter M1S29_16870 PF12704 MacB-like periplasmic core domain M1S29_16870 PF02687 FtsX-like permease family M1S29_16875 PF02321 Outer membrane efflux protein M1S29_16890 PF00929 Exonuclease M1S29_16895 PF03193 RsgA GTPase M1S29_16905 PF00462 Glutaredoxin M1S29_16910 PF02556 Preprotein translocase subunit SecB M1S29_16925 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S29_16925 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S29_16940 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S29_16940 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S29_16950 PF04820 Tryptophan halogenase M1S29_16970 PF00221 Aromatic amino acid lyase M1S29_16985 PF00501 AMP-binding enzyme M1S29_16985 PF13193 AMP-binding enzyme C-terminal domain M1S29_16995 PF00550 Phosphopantetheine attachment site M1S29_17000 PF00550 Phosphopantetheine attachment site M1S29_17015 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M1S29_17015 PF01926 50S ribosome-binding GTPase M1S29_17020 PF13360 PQQ-like domain M1S29_17030 PF03129 Anticodon binding domain M1S29_17030 PF13393 Histidyl-tRNA synthetase M1S29_17035 PF04551 GcpE protein M1S29_17040 PF13464 Domain of unknown function (DUF4115) M1S29_17050 PF04055 Radical SAM superfamily M1S29_17055 PF00334 Nucleoside diphosphate kinase M1S29_17060 PF04384 Iron-sulphur cluster assembly M1S29_17065 PF01569 PAP2 superfamily M1S29_17070 PF13439 Glycosyltransferase Family 4 M1S29_17070 PF00534 Glycosyl transferases group 1 M1S29_17075 PF11818 C-terminal domain of tail specific protease (DUF3340) M1S29_17075 PF00595 PDZ domain M1S29_17075 PF03572 Peptidase family S41 M1S29_17075 PF17804 Tail specific protease N-terminal domain M1S29_17080 PF00933 Glycosyl hydrolase family 3 N terminal domain M1S29_17090 PF00561 alpha/beta hydrolase fold M1S29_17095 PF00171 Aldehyde dehydrogenase family M1S29_17100 PF00171 Aldehyde dehydrogenase family M1S29_17105 PF01202 Shikimate kinase M1S29_17110 PF02447 GntP family permease M1S29_17115 PF01081 KDPG and KHG aldolase M1S29_17120 PF00920 Dehydratase family M1S29_17125 PF00871 Acetokinase family M1S29_17130 PF01515 Phosphate acetyl/butaryl transferase M1S29_17130 PF07085 DRTGG domain M1S29_17135 PF05683 Fumarase C-terminus M1S29_17135 PF05681 Fumarate hydratase (Fumerase) M1S29_17150 PF06689 ClpX C4-type zinc finger M1S29_17150 PF10431 C-terminal, D2-small domain, of ClpB protein M1S29_17150 PF07724 AAA domain (Cdc48 subfamily) M1S29_17155 PF00574 Clp protease M1S29_17160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S29_17160 PF05698 Bacterial trigger factor protein (TF) C-terminus M1S29_17160 PF05697 Bacterial trigger factor protein (TF) M1S29_17165 PF07715 TonB-dependent Receptor Plug Domain M1S29_17165 PF00593 TonB dependent receptor M1S29_17170 PF13640 2OG-Fe(II) oxygenase superfamily M1S29_17170 PF18331 PKHD-type hydroxylase C-terminal domain M1S29_17175 PF00682 HMGL-like M1S29_17175 PF08502 LeuA allosteric (dimerisation) domain M1S29_17180 PF00561 alpha/beta hydrolase fold M1S29_17185 PF07021 Methionine biosynthesis protein MetW M1S29_17185 PF00561 alpha/beta hydrolase fold M1S29_17195 PF01725 Ham1 family M1S29_17205 PF02416 mttA/Hcf106 family M1S29_17210 PF02416 mttA/Hcf106 family M1S29_17215 PF00902 Sec-independent protein translocase protein (TatC) M1S29_17235 PF01790 Prolipoprotein diacylglyceryl transferase M1S29_17250 PF00303 Thymidylate synthase M1S29_17255 PF00186 Dihydrofolate reductase M1S29_17265 PF01625 Peptide methionine sulfoxide reductase M1S29_17275 PF01618 MotA/TolQ/ExbB proton channel family M1S29_17285 PF01842 ACT domain M1S29_17285 PF00551 Formyl transferase M1S29_17295 PF00171 Aldehyde dehydrogenase family M1S29_17300 PF00830 Ribosomal L28 family M1S29_17305 PF00471 Ribosomal protein L33 M1S29_17310 PF02254 TrkA-N domain M1S29_17310 PF00999 Sodium/hydrogen exchanger family M1S29_17330 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) M1S29_17335 PF13361 UvrD-like helicase C-terminal domain M1S29_17335 PF00580 UvrD/REP helicase N-terminal domain M1S29_17350 PF01396 Topoisomerase DNA binding C4 zinc finger M1S29_17350 PF01751 Toprim domain M1S29_17350 PF08272 Topoisomerase I zinc-ribbon-like M1S29_17350 PF01131 DNA topoisomerase M1S29_17360 PF01638 HxlR-like helix-turn-helix M1S29_17365 PF08240 Alcohol dehydrogenase GroES-like domain M1S29_17365 PF00107 Zinc-binding dehydrogenase M1S29_17370 PF04102 SlyX M1S29_17375 PF12848 ABC transporter M1S29_17375 PF00005 ABC transporter M1S29_17375 PF16326 ABC transporter C-terminal domain M1S29_17380 PF01810 LysE type translocator M1S29_17385 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S29_17395 PF00375 Sodium:dicarboxylate symporter family M1S29_17405 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S29_17405 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S29_17425 PF01416 tRNA pseudouridine synthase M1S29_17435 PF01176 Translation initiation factor 1A / IF-1 M1S29_17450 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S29_17460 PF00694 Aconitase C-terminal domain M1S29_17465 PF00330 Aconitase family (aconitate hydratase) M1S29_17475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_17475 PF03466 LysR substrate binding domain M1S29_17495 PF00293 NUDIX domain M1S29_17500 PF05524 PEP-utilising enzyme, N-terminal M1S29_17500 PF02896 PEP-utilising enzyme, TIM barrel domain M1S29_17500 PF01590 GAF domain M1S29_17500 PF00391 PEP-utilising enzyme, mobile domain M1S29_17505 PF00141 Peroxidase M1S29_17510 PF12706 Beta-lactamase superfamily domain M1S29_17515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_17515 PF03466 LysR substrate binding domain M1S29_17525 PF02798 Glutathione S-transferase, N-terminal domain M1S29_17530 PF08279 HTH domain M1S29_17530 PF13280 WYL domain M1S29_17535 PF13419 Haloacid dehalogenase-like hydrolase M1S29_17540 PF00849 RNA pseudouridylate synthase M1S29_17540 PF01479 S4 domain M1S29_17545 PF00575 S1 RNA binding domain M1S29_17545 PF10150 Ribonuclease E/G family M1S29_17545 PF12111 Polyribonucleotide phosphorylase C terminal M1S29_17550 PF00501 AMP-binding enzyme M1S29_17550 PF13193 AMP-binding enzyme C-terminal domain M1S29_17565 PF03466 LysR substrate binding domain M1S29_17565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_17570 PF00106 short chain dehydrogenase M1S29_17575 PF04055 Radical SAM superfamily M1S29_17575 PF06969 HemN C-terminal domain M1S29_17585 PF01554 MatE M1S29_17590 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S29_17590 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_17590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_17595 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S29_17595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_17600 PF03109 ABC1 family M1S29_17605 PF01197 Ribosomal protein L31 M1S29_17620 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1S29_17640 PF03884 DNA gyrase inhibitor YacG M1S29_17645 PF00753 Metallo-beta-lactamase superfamily M1S29_17650 PF00762 Ferrochelatase M1S29_17660 PF01177 Asp/Glu/Hydantoin racemase M1S29_17675 PF01206 Sulfurtransferase TusA M1S29_17680 PF00571 CBS domain M1S29_17680 PF03471 Transporter associated domain M1S29_17685 PF00795 Carbon-nitrogen hydrolase M1S29_17690 PF01588 Putative tRNA binding domain M1S29_17700 PF07963 Prokaryotic N-terminal methylation motif M1S29_17700 PF08334 Type II secretion system (T2SS), protein G M1S29_17705 PF00482 Type II secretion system (T2SS), protein F M1S29_17710 PF18074 Primosomal protein N C-terminal domain M1S29_17710 PF00271 Helicase conserved C-terminal domain M1S29_17710 PF00270 DEAD/DEAH box helicase M1S29_17710 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M1S29_17710 PF17764 3′ DNA-binding domain (3′BD) M1S29_17715 PF00999 Sodium/hydrogen exchanger family M1S29_17715 PF02254 TrkA-N domain M1S29_17720 PF01430 Hsp33 protein M1S29_17730 PF00226 DnaJ domain M1S29_17730 PF01556 DnaJ C terminal domain M1S29_17740 PF01544 CorA-like Mg2+ transporter protein M1S29_17745 PF00013 KH domain M1S29_17745 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M1S29_17745 PF01138 3' exoribonuclease family, domain 1 M1S29_17745 PF03725 3' exoribonuclease family, domain 2 M1S29_17745 PF00575 S1 RNA binding domain M1S29_17750 PF00312 Ribosomal protein S15 M1S29_17755 PF00144 Beta-lactamase M1S29_17760 PF13538 UvrD-like helicase C-terminal domain M1S29_17765 PF12705 PD-(D/E)XK nuclease superfamily M1S29_17765 PF00580 UvrD/REP helicase N-terminal domain M1S29_17765 PF13361 UvrD-like helicase C-terminal domain M1S29_17770 PF17946 RecC C-terminal domain M1S29_17780 PF03976 Polyphosphate kinase 2 (PPK2) M1S29_17790 PF01209 ubiE/COQ5 methyltransferase family M1S29_17800 PF03109 ABC1 family M1S29_17805 PF01494 FAD binding domain M1S29_17810 PF01502 Phosphoribosyl-AMP cyclohydrolase M1S29_17825 PF13244 Domain of unknown function (DUF4040) M1S29_17825 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M1S29_17825 PF00361 Proton-conducting membrane transporter M1S29_17825 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S29_17830 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S29_17835 PF00361 Proton-conducting membrane transporter M1S29_17840 PF01899 Na+/H+ ion antiporter subunit M1S29_17845 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M1S29_17850 PF03334 Na+/H+ antiporter subunit M1S29_17855 PF02033 Ribosome-binding factor A M1S29_17860 PF08364 Bacterial translation initiation factor IF-2 associated region M1S29_17860 PF04760 Translation initiation factor IF-2, N-terminal region M1S29_17860 PF00009 Elongation factor Tu GTP binding domain M1S29_17860 PF11987 Translation-initiation factor 2 M1S29_17865 PF00575 S1 RNA binding domain M1S29_17865 PF08529 NusA N-terminal domain M1S29_17865 PF13184 NusA-like KH domain M1S29_17870 PF17384 RimP C-terminal SH3 domain M1S29_17870 PF02576 RimP N-terminal domain M1S29_17890 PF03840 Preprotein translocase SecG subunit M1S29_17895 PF00121 Triosephosphate isomerase M1S29_17900 PF00437 Type II/IV secretion system protein M1S29_17900 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S29_17905 PF00482 Type II secretion system (T2SS), protein F M1S29_17915 PF01478 Type IV leader peptidase family M1S29_17915 PF06750 Bacterial Peptidase A24 N-terminal domain M1S29_17920 PF01121 Dephospho-CoA kinase M1S29_17930 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S29_17930 PF00588 SpoU rRNA Methylase family M1S29_17935 PF06865 Pyrimidine/purine nucleoside phosphorylase M1S29_17945 PF02463 RecF/RecN/SMC N terminal domain M1S29_17950 PF02622 Uncharacterized ACR, COG1678 M1S29_17955 PF03652 Holliday junction resolvase M1S29_17960 PF13533 Biotin-lipoyl like M1S29_17985 PF02805 Metal binding domain of Ada M1S29_17985 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S29_17985 PF12833 Helix-turn-helix domain M1S29_17985 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S29_17990 PF01066 CDP-alcohol phosphatidyltransferase M1S29_18000 PF01541 GIY-YIG catalytic domain M1S29_18000 PF08459 UvrC Helix-hairpin-helix N-terminal M1S29_18000 PF02151 UvrB/uvrC motif M1S29_18020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S29_18020 PF00378 Enoyl-CoA hydratase/isomerase M1S29_18020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S29_18025 PF02803 Thiolase, C-terminal domain M1S29_18025 PF00108 Thiolase, N-terminal domain M1S29_18055 PF00376 MerR family regulatory protein M1S29_18055 PF09278 MerR, DNA binding M1S29_18065 PF01323 DSBA-like thioredoxin domain M1S29_18080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_18080 PF00183 Hsp90 protein M1S29_18095 PF13726 Na+-H+ antiporter family M1S29_18095 PF03553 Na+/H+ antiporter family M1S29_18100 PF00561 alpha/beta hydrolase fold M1S29_18120 PF04998 RNA polymerase Rpb1, domain 5 M1S29_18120 PF00623 RNA polymerase Rpb1, domain 2 M1S29_18120 PF04983 RNA polymerase Rpb1, domain 3 M1S29_18120 PF05000 RNA polymerase Rpb1, domain 4 M1S29_18120 PF04997 RNA polymerase Rpb1, domain 1 M1S29_18125 PF04565 RNA polymerase Rpb2, domain 3 M1S29_18125 PF04561 RNA polymerase Rpb2, domain 2 M1S29_18125 PF04563 RNA polymerase beta subunit M1S29_18125 PF10385 RNA polymerase beta subunit external 1 domain M1S29_18125 PF00562 RNA polymerase Rpb2, domain 6 M1S29_18125 PF04560 RNA polymerase Rpb2, domain 7 M1S29_18130 PF00542 Ribosomal protein L7/L12 C-terminal domain M1S29_18130 PF16320 Ribosomal protein L7/L12 dimerisation domain M1S29_18135 PF00466 Ribosomal protein L10 M1S29_18140 PF00687 Ribosomal protein L1p/L10e family M1S29_18145 PF00298 Ribosomal protein L11, RNA binding domain M1S29_18145 PF03946 Ribosomal protein L11, N-terminal domain M1S29_18150 PF00467 KOW motif M1S29_18150 PF02357 Transcription termination factor nusG M1S29_18155 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M1S29_18165 PF03143 Elongation factor Tu C-terminal domain M1S29_18165 PF03144 Elongation factor Tu domain 2 M1S29_18165 PF00009 Elongation factor Tu GTP binding domain M1S29_18190 PF00425 chorismate binding enzyme M1S29_18190 PF04715 Anthranilate synthase component I, N terminal region M1S29_18195 PF13419 Haloacid dehalogenase-like hydrolase M1S29_18200 PF00498 FHA domain M1S29_18200 PF12401 Protein of unknown function (DUF2662) M1S29_18205 PF03958 Bacterial type II/III secretion system short domain M1S29_18205 PF00263 Bacterial type II and III secretion system protein M1S29_18220 PF00816 H-NS histone family M1S29_18245 PF03900 Porphobilinogen deaminase, C-terminal domain M1S29_18245 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M1S29_18250 PF00072 Response regulator receiver domain M1S29_18250 PF04397 LytTr DNA-binding domain M1S29_18255 PF07694 5TMR of 5TMR-LYT M1S29_18255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_18255 PF06580 Histidine kinase M1S29_18260 PF14698 Argininosuccinate lyase C-terminal M1S29_18260 PF00206 Lyase M1S29_18265 PF04362 Bacterial Fe(2+) trafficking M1S29_18270 PF01895 PhoU domain M1S29_18275 PF02321 Outer membrane efflux protein M1S29_18280 PF00892 EamA-like transporter family M1S29_18295 PF13667 ThiC-associated domain M1S29_18295 PF01964 Radical SAM ThiC family M1S29_18300 PF00293 NUDIX domain M1S29_18305 PF00149 Calcineurin-like phosphoesterase M1S29_18310 PF01258 Prokaryotic dksA/traR C4-type zinc finger M1S29_18315 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S29_18320 PF01098 Cell cycle protein M1S29_18325 PF08245 Mur ligase middle domain M1S29_18325 PF02875 Mur ligase family, glutamate ligase domain M1S29_18335 PF07664 Ferrous iron transport protein B C terminus M1S29_18335 PF02421 Ferrous iron transport protein B M1S29_18335 PF07670 Nucleoside recognition M1S29_18345 PF02899 Phage integrase, N-terminal SAM-like domain M1S29_18345 PF00589 Phage integrase family M1S29_18350 PF10411 Disulfide bond isomerase protein N-terminus M1S29_18350 PF13098 Thioredoxin-like domain M1S29_18355 PF00742 Homoserine dehydrogenase M1S29_18355 PF03447 Homoserine dehydrogenase, NAD binding domain M1S29_18355 PF01842 ACT domain M1S29_18360 PF00291 Pyridoxal-phosphate dependent enzyme M1S29_18365 PF00768 D-alanyl-D-alanine carboxypeptidase M1S29_18370 PF00196 Bacterial regulatory proteins, luxR family M1S29_18370 PF00072 Response regulator receiver domain M1S29_18375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S29_18375 PF00512 His Kinase A (phospho-acceptor) domain M1S29_18380 PF00072 Response regulator receiver domain M1S29_18380 PF00158 Sigma-54 interaction domain M1S29_18380 PF02954 Bacterial regulatory protein, Fis family M1S29_18385 PF03572 Peptidase family S41 M1S29_18385 PF00595 PDZ domain M1S29_18390 PF01676 Metalloenzyme superfamily M1S29_18390 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M1S29_18395 PF03739 Lipopolysaccharide export system permease LptF/LptG M1S29_18405 PF00883 Cytosol aminopeptidase family, catalytic domain M1S29_18405 PF02789 Cytosol aminopeptidase family, N-terminal domain M1S29_18425 PF00677 Lumazine binding domain M1S29_18435 PF01872 RibD C-terminal domain M1S29_18435 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S29_18440 PF03477 ATP cone domain M1S29_18445 PF00909 Ammonium Transporter Family M1S29_18450 PF00543 Nitrogen regulatory protein P-II M1S29_18470 PF01636 Phosphotransferase enzyme family M1S29_18475 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M1S29_18495 PF02909 Tetracyclin repressor-like, C-terminal domain M1S29_18495 PF00440 Bacterial regulatory proteins, tetR family M1S29_18500 PF07690 Major Facilitator Superfamily M1S29_18510 PF01740 STAS domain M1S29_18510 PF00916 Sulfate permease family M1S29_18555 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S29_18555 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S29_18555 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S29_18555 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S29_18560 PF00809 Pterin binding enzyme M1S29_18575 PF00665 Integrase core domain M1S29_18600 PF00589 Phage integrase family M1S29_18600 PF02899 Phage integrase, N-terminal SAM-like domain M1S29_18630 PF01740 STAS domain M1S29_18630 PF00916 Sulfate permease family M1S29_18635 PF00582 Universal stress protein family M1S29_18655 PF00665 Integrase core domain M1S29_18670 PF00155 Aminotransferase class I and II M1S29_18670 PF00392 Bacterial regulatory proteins, gntR family M1S29_18680 PF00701 Dihydrodipicolinate synthetase family M1S29_18695 PF03573 outer membrane porin, OprD family M1S29_18700 PF00719 Inorganic pyrophosphatase M1S29_18715 PF00501 AMP-binding enzyme M1S29_18715 PF13193 AMP-binding enzyme C-terminal domain M1S29_18720 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S29_18720 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S29_18725 PF07690 Major Facilitator Superfamily M1S29_18730 PF03458 UPF0126 domain M1S29_18735 PF02810 SEC-C motif M1S29_18740 PF03741 Integral membrane protein TerC family M1S29_18740 PF03471 Transporter associated domain M1S29_18745 PF03641 Possible lysine decarboxylase M1S29_18750 PF07690 Major Facilitator Superfamily M1S29_18760 PF11799 impB/mucB/samB family C-terminal domain M1S29_18760 PF11798 IMS family HHH motif M1S29_18760 PF00817 impB/mucB/samB family M1S29_18780 PF11842 Domain of unknown function (DUF3362) M1S29_18780 PF04055 Radical SAM superfamily M1S29_18780 PF08497 Radical SAM N-terminal M1S29_18800 PF03358 NADPH-dependent FMN reductase M1S29_18810 PF00291 Pyridoxal-phosphate dependent enzyme M1S29_18870 PF01327 Polypeptide deformylase M1S29_18880 PF17782 DprA winged helix domain M1S29_18880 PF02481 DNA recombination-mediator protein A M1S29_18885 PF01300 Telomere recombination M1S29_18890 PF00892 EamA-like transporter family M1S29_18895 PF00440 Bacterial regulatory proteins, tetR family M1S29_18900 PF07690 Major Facilitator Superfamily M1S29_18910 PF00255 Glutathione peroxidase M1S29_18920 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M1S29_18925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S29_18925 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S29_18930 PF00231 ATP synthase M1S29_18935 PF00306 ATP synthase alpha/beta chain, C terminal domain M1S29_18935 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S29_18935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S29_18940 PF00213 ATP synthase delta (OSCP) subunit M1S29_18945 PF00430 ATP synthase B/B' CF(0) M1S29_18950 PF00137 ATP synthase subunit C M1S29_18955 PF00119 ATP synthase A chain M1S29_18975 PF00005 ABC transporter M1S29_18980 PF00950 ABC 3 transport family M1S29_18985 PF01810 LysE type translocator M1S29_18990 PF04261 Dyp-type peroxidase family M1S29_19000 PF00390 Malic enzyme, N-terminal domain M1S29_19000 PF03949 Malic enzyme, NAD binding domain M1S29_19005 PF03485 Arginyl tRNA synthetase N terminal domain M1S29_19005 PF05746 DALR anticodon binding domain M1S29_19005 PF00750 tRNA synthetases class I (R) M1S29_19025 PF02678 Pirin M1S29_19025 PF05726 Pirin C-terminal cupin domain M1S29_19035 PF03551 Transcriptional regulator PadR-like family M1S29_19040 PF13427 Domain of unknown function (DUF4111) M1S29_19040 PF01909 Nucleotidyltransferase domain M1S29_19045 PF00117 Glutamine amidotransferase class-I M1S29_19045 PF00958 GMP synthase C terminal domain M1S29_19045 PF02540 NAD synthase M1S29_19050 PF04286 Protein of unknown function (DUF445) M1S29_19055 PF07681 DoxX M1S29_19060 PF09335 SNARE associated Golgi protein M1S29_19075 PF13614 AAA domain M1S29_19085 PF01722 BolA-like protein M1S29_19100 PF01648 4'-phosphopantetheinyl transferase superfamily M1S29_19105 PF12697 Alpha/beta hydrolase family M1S29_19125 PF16197 Ketoacyl-synthetase C-terminal extension M1S29_19125 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S29_19125 PF08242 Methyltransferase domain M1S29_19125 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S29_19125 PF14765 Polyketide synthase dehydratase M1S29_19125 PF00975 Thioesterase domain M1S29_19125 PF00550 Phosphopantetheine attachment site M1S29_19130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_19130 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_19130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_19135 PF00501 AMP-binding enzyme M1S29_19140 PF03472 Autoinducer binding domain M1S29_19140 PF00196 Bacterial regulatory proteins, luxR family M1S29_19150 PF00765 Autoinducer synthase M1S29_19155 PF00083 Sugar (and other) transporter M1S29_19155 PF07690 Major Facilitator Superfamily M1S29_19160 PF00378 Enoyl-CoA hydratase/isomerase M1S29_19165 PF00378 Enoyl-CoA hydratase/isomerase M1S29_19170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S29_19170 PF02770 Acyl-CoA dehydrogenase, middle domain M1S29_19170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S29_19175 PF13193 AMP-binding enzyme C-terminal domain M1S29_19175 PF00501 AMP-binding enzyme M1S29_19180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S29_19180 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S29_19185 PF00171 Aldehyde dehydrogenase family M1S29_19195 PF00324 Amino acid permease M1S29_19200 PF00324 Amino acid permease M1S29_19210 PF01168 Alanine racemase, N-terminal domain M1S29_19210 PF00842 Alanine racemase, C-terminal domain M1S29_19215 PF01266 FAD dependent oxidoreductase M1S29_19220 PF01037 Lrp/AsnC ligand binding domain M1S29_19230 PF00593 TonB dependent receptor M1S29_19230 PF07715 TonB-dependent Receptor Plug Domain M1S29_19245 PF00849 RNA pseudouridylate synthase M1S29_19260 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S29_19260 PF00440 Bacterial regulatory proteins, tetR family M1S29_19270 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S29_19270 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S29_19305 PF00694 Aconitase C-terminal domain M1S29_19305 PF00330 Aconitase family (aconitate hydratase) M1S29_19310 PF00285 Citrate synthase, C-terminal domain M1S29_19320 PF00392 Bacterial regulatory proteins, gntR family M1S29_19320 PF07729 FCD domain M1S29_19330 PF00155 Aminotransferase class I and II M1S29_19335 PF01565 FAD binding domain M1S29_19335 PF09330 D-lactate dehydrogenase, membrane binding M1S29_19340 PF01070 FMN-dependent dehydrogenase M1S29_19345 PF07729 FCD domain M1S29_19345 PF00392 Bacterial regulatory proteins, gntR family M1S29_19350 PF02652 L-lactate permease M1S29_19355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S29_19355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S29_19355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S29_19355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S29_19360 PF16363 GDP-mannose 4,6 dehydratase M1S29_19365 PF00342 Phosphoglucose isomerase M1S29_19370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S29_19370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S29_19370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S29_19375 PF00483 Nucleotidyl transferase M1S29_19380 PF02397 Bacterial sugar transferase M1S29_19385 PF00535 Glycosyl transferase family 2 M1S29_19415 PF03102 NeuB family M1S29_19415 PF08666 SAF domain M1S29_19430 PF02348 Cytidylyltransferase M1S29_19435 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M1S29_19440 PF02719 Polysaccharide biosynthesis protein M1S29_19445 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S29_19445 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S29_19445 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S29_19450 PF18412 Outer-membrane lipoprotein Wza C-terminal domain M1S29_19450 PF10531 SLBB domain M1S29_19450 PF02563 Polysaccharide biosynthesis/export protein M1S29_19455 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S29_19460 PF13614 AAA domain M1S29_19460 PF13807 G-rich domain on putative tyrosine kinase M1S29_19460 PF02706 Chain length determinant protein M1S29_19465 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S29_19465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S29_19470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S29_19470 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S29_19475 PF03023 Lipid II flippase MurJ M1S29_19480 PF01510 N-acetylmuramoyl-L-alanine amidase M1S29_19485 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M1S29_19485 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M1S29_19495 PF04185 Phosphoesterase family M1S29_19495 PF05506 Domain of unknown function (DUF756) M1S29_19505 PF03725 3' exoribonuclease family, domain 2 M1S29_19505 PF01138 3' exoribonuclease family, domain 1 M1S29_19510 PF00487 Fatty acid desaturase M1S29_19515 PF00175 Oxidoreductase NAD-binding domain M1S29_19520 PF00440 Bacterial regulatory proteins, tetR family M1S29_19530 PF01323 DSBA-like thioredoxin domain M1S29_19540 PF13419 Haloacid dehalogenase-like hydrolase M1S29_19545 PF00106 short chain dehydrogenase M1S29_19560 PF00583 Acetyltransferase (GNAT) family M1S29_19560 PF00696 Amino acid kinase family M1S29_19565 PF09084 NMT1/THI5 like M1S29_19570 PF09084 NMT1/THI5 like M1S29_19575 PF00296 Luciferase-like monooxygenase M1S29_19580 PF00528 Binding-protein-dependent transport system inner membrane component M1S29_19585 PF00005 ABC transporter M1S29_19590 PF08362 YcdC-like protein, C-terminal region M1S29_19590 PF00440 Bacterial regulatory proteins, tetR family M1S29_19595 PF01048 Phosphorylase superfamily M1S29_19605 PF01687 Riboflavin kinase M1S29_19605 PF06574 FAD synthetase M1S29_19610 PF06827 Zinc finger found in FPG and IleRS M1S29_19610 PF00133 tRNA synthetases class I (I, L, M and V) M1S29_19610 PF08264 Anticodon-binding domain of tRNA M1S29_19615 PF01252 Signal peptidase (SPase) II M1S29_19620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S29_19660 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S29_19665 PF07859 alpha/beta hydrolase fold M1S29_19685 PF03466 LysR substrate binding domain M1S29_19685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S29_19690 PF01025 GrpE M1S29_19695 PF00012 Hsp70 protein M1S29_19715 PF13406 Transglycosylase SLT domain M1S29_19720 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M1S29_19720 PF02222 ATP-grasp domain M1S29_19725 PF00731 AIR carboxylase M1S29_19735 PF01225 Mur ligase family, catalytic domain M1S29_19735 PF02875 Mur ligase family, glutamate ligase domain M1S29_19735 PF08245 Mur ligase middle domain M1S29_19745 PF01569 PAP2 superfamily M1S29_19750 PF03741 Integral membrane protein TerC family M1S29_19760 PF03738 Glutathionylspermidine synthase preATP-grasp M1S29_19765 PF00355 Rieske [2Fe-2S] domain M1S29_19770 PF01979 Amidohydrolase family M1S29_19775 PF00156 Phosphoribosyl transferase domain M1S29_19785 PF10411 Disulfide bond isomerase protein N-terminus M1S29_19785 PF13098 Thioredoxin-like domain M1S29_19790 PF01545 Cation efflux family M1S29_19790 PF16916 Dimerisation domain of Zinc Transporter M1S29_19795 PF02583 Metal-sensitive transcriptional repressor M1S29_19800 PF12631 MnmE helical domain M1S29_19800 PF10396 GTP-binding protein TrmE N-terminus M1S29_19800 PF01926 50S ribosome-binding GTPase M1S29_19805 PF02096 60Kd inner membrane protein M1S29_19805 PF14849 YidC periplasmic domain M1S29_19810 PF01809 Putative membrane protein insertion efficiency factor M1S29_19815 PF00825 Ribonuclease P M1S29_19820 PF00468 Ribosomal protein L34 M1S29_19845 PF10410 DnaB-helicase binding domain of primase M1S29_19845 PF08275 DNA primase catalytic core, N-terminal domain M1S29_19845 PF01807 CHC2 zinc finger M1S29_19875 PF00625 Guanylate kinase M1S29_19890 PF07015 VirC1 protein M1S29_19900 PF00589 Phage integrase family M1S29_19900 PF02899 Phage integrase, N-terminal SAM-like domain M1S29_19935 PF02811 PHP domain M1S29_19935 PF14579 Helix-hairpin-helix motif M1S29_19935 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S29_19935 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S29_19945 PF02811 PHP domain M1S29_19945 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S29_19945 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S29_19945 PF14579 Helix-hairpin-helix motif M1S29_19960 PF01612 3'-5' exonuclease M1S29_19960 PF00476 DNA polymerase family A M1S29_19960 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S29_19960 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S29_19965 PF00154 recA bacterial DNA recombination protein M1S29_19965 PF03161 LAGLIDADG DNA endonuclease family M1S29_19995 PF02463 RecF/RecN/SMC N terminal domain M1S29_19995 PF06470 SMC proteins Flexible Hinge Domain M1S29_20015 PF02867 Ribonucleotide reductase, barrel domain M1S29_20015 PF00317 Ribonucleotide reductase, all-alpha domain M1S29_20015 PF03477 ATP cone domain M1S29_20020 PF00268 Ribonucleotide reductase, small chain M1S29_20060 PF00929 Exonuclease M1S29_20095 PF13737 Transposase DDE domain M1S29_20105 PF16925 Tetracyclin repressor-like, C-terminal domain M1S29_20105 PF00440 Bacterial regulatory proteins, tetR family M1S29_20115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S29_20125 PF00465 Iron-containing alcohol dehydrogenase M1S29_20140 PF00756 Putative esterase M1S29_20145 PF00107 Zinc-binding dehydrogenase M1S29_20145 PF08240 Alcohol dehydrogenase GroES-like domain M1S29_20150 PF02583 Metal-sensitive transcriptional repressor M1S29_20165 PF00107 Zinc-binding dehydrogenase M1S29_20165 PF08240 Alcohol dehydrogenase GroES-like domain M1S29_20165 PF13823 Alcohol dehydrogenase GroES-associated M1S29_20230 PF02216 B domain M1S29_20230 PF00746 LPXTG cell wall anchor motif M1S29_20230 PF01476 LysM domain M1S29_20230 PF03373 Octapeptide repeat M1S29_20230 PF04650 YSIRK type signal peptide M1S29_20245 PF02559 CarD-like/TRCF domain M1S29_20245 PF00270 DEAD/DEAH box helicase M1S29_20245 PF00271 Helicase conserved C-terminal domain M1S29_20245 PF03461 TRCF domain M1S29_20245 PF17757 UvrB interaction domain M1S29_20265 PF00005 ABC transporter M1S29_20265 PF09383 NIL domain