locus-tag class description M1S38_00005 PF00308 Bacterial dnaA protein M1S38_00005 PF08299 Bacterial dnaA protein helix-turn-helix M1S38_00005 PF11638 DnaA N-terminal domain M1S38_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S38_00010 PF02767 DNA polymerase III beta subunit, central domain M1S38_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S38_00015 PF02463 RecF/RecN/SMC N terminal domain M1S38_00020 PF00204 DNA gyrase B M1S38_00020 PF00986 DNA gyrase B subunit, carboxyl terminus M1S38_00020 PF18053 DNA gyrase B subunit insert domain M1S38_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_00020 PF01751 Toprim domain M1S38_00030 PF09335 SNARE associated Golgi protein M1S38_00035 PF00005 ABC transporter M1S38_00035 PF12848 ABC transporter M1S38_00055 PF01521 Iron-sulphur cluster biosynthesis M1S38_00060 PF00561 alpha/beta hydrolase fold M1S38_00065 PF03702 Anhydro-N-acetylmuramic acid kinase M1S38_00070 PF00579 tRNA synthetases class I (W and Y) M1S38_00110 PF00209 Sodium:neurotransmitter symporter family M1S38_00120 PF01189 16S rRNA methyltransferase RsmB/F M1S38_00120 PF01029 NusB family M1S38_00125 PF02911 Formyl transferase, C-terminal domain M1S38_00125 PF00551 Formyl transferase M1S38_00130 PF00920 Dehydratase family M1S38_00150 PF00860 Permease family M1S38_00155 PF00311 Phosphoenolpyruvate carboxylase M1S38_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S38_00160 PF00440 Bacterial regulatory proteins, tetR family M1S38_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S38_00170 PF00873 AcrB/AcrD/AcrF family M1S38_00180 PF00684 DnaJ central domain M1S38_00180 PF00226 DnaJ domain M1S38_00180 PF01556 DnaJ C terminal domain M1S38_00190 PF01113 Dihydrodipicolinate reductase, N-terminus M1S38_00190 PF05173 Dihydrodipicolinate reductase, C-terminus M1S38_00200 PF07690 Major Facilitator Superfamily M1S38_00205 PF00248 Aldo/keto reductase family M1S38_00210 PF03466 LysR substrate binding domain M1S38_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_00225 PF00392 Bacterial regulatory proteins, gntR family M1S38_00225 PF00155 Aminotransferase class I and II M1S38_00230 PF00107 Zinc-binding dehydrogenase M1S38_00230 PF08240 Alcohol dehydrogenase GroES-like domain M1S38_00235 PF03352 Methyladenine glycosylase M1S38_00250 PF10576 Iron-sulfur binding domain of endonuclease III M1S38_00250 PF00633 Helix-hairpin-helix motif M1S38_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S38_00250 PF14815 NUDIX domain M1S38_00265 PF07043 Protein of unknown function (DUF1328) M1S38_00270 PF03692 Putative zinc- or iron-chelating domain M1S38_00275 PF07995 Glucose / Sorbosone dehydrogenase M1S38_00280 PF00004 ATPase family associated with various cellular activities (AAA) M1S38_00280 PF16193 AAA C-terminal domain M1S38_00280 PF12002 MgsA AAA+ ATPase C terminal M1S38_00285 PF01226 Formate/nitrite transporter M1S38_00295 PF01259 SAICAR synthetase M1S38_00305 PF00701 Dihydrodipicolinate synthetase family M1S38_00310 PF00857 Isochorismatase family M1S38_00315 PF01758 Sodium Bile acid symporter family M1S38_00320 PF01554 MatE M1S38_00325 PF04463 Protein of unknown function (DUF523) M1S38_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S38_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S38_00345 PF14497 Glutathione S-transferase, C-terminal domain M1S38_00345 PF02798 Glutathione S-transferase, N-terminal domain M1S38_00355 PF00324 Amino acid permease M1S38_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S38_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S38_00375 PF07702 UTRA domain M1S38_00375 PF00392 Bacterial regulatory proteins, gntR family M1S38_00380 PF05962 HutD M1S38_00385 PF17392 Urocanase C-terminal domain M1S38_00385 PF01175 Urocanase Rossmann-like domain M1S38_00385 PF17391 Urocanase N-terminal domain M1S38_00390 PF00221 Aromatic amino acid lyase M1S38_00395 PF00324 Amino acid permease M1S38_00400 PF01979 Amidohydrolase family M1S38_00405 PF00491 Arginase family M1S38_00420 PF01177 Asp/Glu/Hydantoin racemase M1S38_00425 PF01380 SIS domain M1S38_00430 PF00132 Bacterial transferase hexapeptide (six repeats) M1S38_00430 PF12804 MobA-like NTP transferase domain M1S38_00430 PF14602 Hexapeptide repeat of succinyl-transferase M1S38_00435 PF04608 Phosphatidylglycerophosphatase A M1S38_00440 PF00586 AIR synthase related protein, N-terminal domain M1S38_00440 PF02769 AIR synthase related protein, C-terminal domain M1S38_00445 PF01029 NusB family M1S38_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase M1S38_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S38_00455 PF00925 GTP cyclohydrolase II M1S38_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase M1S38_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M1S38_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S38_00490 PF00581 Rhodanese-like domain M1S38_00495 PF02666 Phosphatidylserine decarboxylase M1S38_00500 PF03069 Acetamidase/Formamidase family M1S38_00520 PF11808 Phosphate regulon sensor protein PhoR M1S38_00520 PF00989 PAS fold M1S38_00520 PF00512 His Kinase A (phospho-acceptor) domain M1S38_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_00525 PF00486 Transcriptional regulatory protein, C terminal M1S38_00525 PF00072 Response regulator receiver domain M1S38_00535 PF00106 short chain dehydrogenase M1S38_00540 PF01554 MatE M1S38_00545 PF00155 Aminotransferase class I and II M1S38_00550 PF04286 Protein of unknown function (DUF445) M1S38_00565 PF04262 Glutamate-cysteine ligase M1S38_00570 PF02600 Disulfide bond formation protein DsbB M1S38_00575 PF04717 Type VI secretion system, phage-baseplate injector M1S38_00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S38_00575 PF13296 Putative type VI secretion system Rhs element Vgr M1S38_00580 PF01476 LysM domain M1S38_00580 PF00877 NlpC/P60 family M1S38_00595 PF05728 Uncharacterised protein family (UPF0227) M1S38_00600 PF01751 Toprim domain M1S38_00600 PF00986 DNA gyrase B subunit, carboxyl terminus M1S38_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_00600 PF00204 DNA gyrase B M1S38_00605 PF00106 short chain dehydrogenase M1S38_00610 PF04115 Ureidoglycolate lyase M1S38_00615 PF03561 Allantoicase repeat M1S38_00620 PF01494 FAD binding domain M1S38_00630 PF00860 Permease family M1S38_00635 PF00576 HIUase/Transthyretin family M1S38_00665 PF11412 Disulphide bond corrector protein DsbC M1S38_00665 PF02683 Cytochrome C biogenesis protein transmembrane region M1S38_00670 PF00990 Diguanylate cyclase, GGDEF domain M1S38_00670 PF07694 5TMR of 5TMR-LYT M1S38_00675 PF07859 alpha/beta hydrolase fold M1S38_00685 PF03960 ArsC family M1S38_00690 PF03372 Endonuclease/Exonuclease/phosphatase family M1S38_00695 PF00156 Phosphoribosyl transferase domain M1S38_00700 PF00593 TonB dependent receptor M1S38_00700 PF07715 TonB-dependent Receptor Plug Domain M1S38_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M1S38_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M1S38_00715 PF03033 Glycosyltransferase family 28 N-terminal domain M1S38_00715 PF04101 Glycosyltransferase family 28 C-terminal domain M1S38_00720 PF08245 Mur ligase middle domain M1S38_00720 PF01225 Mur ligase family, catalytic domain M1S38_00720 PF02875 Mur ligase family, glutamate ligase domain M1S38_00725 PF01820 D-ala D-ala ligase N-terminus M1S38_00725 PF07478 D-ala D-ala ligase C-terminus M1S38_00730 PF08478 POTRA domain, FtsQ-type M1S38_00730 PF03799 Cell division protein FtsQ M1S38_00735 PF02491 SHS2 domain inserted in FTSA M1S38_00740 PF00091 Tubulin/FtsZ family, GTPase domain M1S38_00740 PF12327 FtsZ family, C-terminal domain M1S38_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M1S38_00755 PF01551 Peptidase family M23 M1S38_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain M1S38_00760 PF00456 Transketolase, thiamine diphosphate binding domain M1S38_00765 PF02817 e3 binding domain M1S38_00765 PF00364 Biotin-requiring enzyme M1S38_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S38_00775 PF01169 Uncharacterized protein family UPF0016 M1S38_00780 PF00593 TonB dependent receptor M1S38_00780 PF07715 TonB-dependent Receptor Plug Domain M1S38_00785 PF00258 Flavodoxin M1S38_00785 PF01613 Flavin reductase like domain M1S38_00790 PF03692 Putative zinc- or iron-chelating domain M1S38_00795 PF00571 CBS domain M1S38_00795 PF00478 IMP dehydrogenase / GMP reductase domain M1S38_00800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S38_00800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S38_00800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S38_00800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S38_00805 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M1S38_00805 PF01243 Pyridoxamine 5'-phosphate oxidase M1S38_00810 PF17768 RecJ OB domain M1S38_00810 PF02272 DHHA1 domain M1S38_00810 PF01368 DHH family M1S38_00830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S38_00835 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M1S38_00840 PF04452 RNA methyltransferase M1S38_00845 PF00924 Mechanosensitive ion channel M1S38_00855 PF13193 AMP-binding enzyme C-terminal domain M1S38_00855 PF16177 Acetyl-coenzyme A synthetase N-terminus M1S38_00855 PF00501 AMP-binding enzyme M1S38_00860 PF00857 Isochorismatase family M1S38_00865 PF01037 Lrp/AsnC ligand binding domain M1S38_00870 PF00872 Transposase, Mutator family M1S38_00875 PF00296 Luciferase-like monooxygenase M1S38_00880 PF03358 NADPH-dependent FMN reductase M1S38_00885 PF00072 Response regulator receiver domain M1S38_00885 PF00196 Bacterial regulatory proteins, luxR family M1S38_00895 PF00672 HAMP domain M1S38_00895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_00895 PF00512 His Kinase A (phospho-acceptor) domain M1S38_00895 PF01627 Hpt domain M1S38_00895 PF00072 Response regulator receiver domain M1S38_00900 PF04341 Protein of unknown function, DUF485 M1S38_00905 PF00474 Sodium:solute symporter family M1S38_00915 PF02028 BCCT, betaine/carnitine/choline family transporter M1S38_00925 PF00990 Diguanylate cyclase, GGDEF domain M1S38_00935 PF00005 ABC transporter M1S38_00935 PF17760 UvrA interaction domain M1S38_00935 PF17755 UvrA DNA-binding domain M1S38_00940 PF00440 Bacterial regulatory proteins, tetR family M1S38_00940 PF16925 Tetracyclin repressor-like, C-terminal domain M1S38_00945 PF00107 Zinc-binding dehydrogenase M1S38_00945 PF08240 Alcohol dehydrogenase GroES-like domain M1S38_00955 PF06942 GlpM protein M1S38_00960 PF02581 Thiamine monophosphate synthase M1S38_00960 PF03070 TENA/THI-4/PQQC family M1S38_00960 PF08543 Phosphomethylpyrimidine kinase M1S38_00970 PF07690 Major Facilitator Superfamily M1S38_00975 PF00436 Single-strand binding protein family M1S38_00985 PF03591 AzlC protein M1S38_00995 PF00324 Amino acid permease M1S38_01000 PF00155 Aminotransferase class I and II M1S38_01000 PF00392 Bacterial regulatory proteins, gntR family M1S38_01005 PF00202 Aminotransferase class-III M1S38_01010 PF00171 Aldehyde dehydrogenase family M1S38_01015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_01020 PF00857 Isochorismatase family M1S38_01025 PF02678 Pirin M1S38_01025 PF05726 Pirin C-terminal cupin domain M1S38_01030 PF01593 Flavin containing amine oxidoreductase M1S38_01050 PF07690 Major Facilitator Superfamily M1S38_01055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_01055 PF03466 LysR substrate binding domain M1S38_01075 PF00248 Aldo/keto reductase family M1S38_01080 PF12833 Helix-turn-helix domain M1S38_01080 PF02311 AraC-like ligand binding domain M1S38_01110 PF01638 HxlR-like helix-turn-helix M1S38_01115 PF02525 Flavodoxin-like fold M1S38_01135 PF02705 K+ potassium transporter M1S38_01160 PF00230 Major intrinsic protein M1S38_01175 PF00977 Histidine biosynthesis protein M1S38_01180 PF01636 Phosphotransferase enzyme family M1S38_01195 PF03992 Antibiotic biosynthesis monooxygenase M1S38_01210 PF00977 Histidine biosynthesis protein M1S38_01225 PF00117 Glutamine amidotransferase class-I M1S38_01230 PF00475 Imidazoleglycerol-phosphate dehydratase M1S38_01250 PF00583 Acetyltransferase (GNAT) family M1S38_01255 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M1S38_01255 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M1S38_01265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_01265 PF00672 HAMP domain M1S38_01265 PF00512 His Kinase A (phospho-acceptor) domain M1S38_01270 PF00072 Response regulator receiver domain M1S38_01270 PF00486 Transcriptional regulatory protein, C terminal M1S38_01275 PF17674 HHH domain M1S38_01275 PF16921 Tex protein YqgF-like domain M1S38_01275 PF00575 S1 RNA binding domain M1S38_01275 PF09371 Tex-like protein N-terminal domain M1S38_01280 PF00916 Sulfate permease family M1S38_01280 PF01740 STAS domain M1S38_01285 PF00106 short chain dehydrogenase M1S38_01290 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S38_01295 PF12848 ABC transporter M1S38_01295 PF00005 ABC transporter M1S38_01320 PF04191 Phospholipid methyltransferase M1S38_01340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S38_01340 PF00529 HlyD membrane-fusion protein of T1SS M1S38_01345 PF00873 AcrB/AcrD/AcrF family M1S38_01350 PF01545 Cation efflux family M1S38_01380 PF00324 Amino acid permease M1S38_01395 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S38_01410 PF01795 MraW methylase family M1S38_01420 PF03717 Penicillin-binding Protein dimerisation domain M1S38_01420 PF00905 Penicillin binding protein transpeptidase domain M1S38_01425 PF01225 Mur ligase family, catalytic domain M1S38_01425 PF02875 Mur ligase family, glutamate ligase domain M1S38_01425 PF08245 Mur ligase middle domain M1S38_01430 PF08245 Mur ligase middle domain M1S38_01430 PF01225 Mur ligase family, catalytic domain M1S38_01430 PF02875 Mur ligase family, glutamate ligase domain M1S38_01435 PF00953 Glycosyl transferase family 4 M1S38_01445 PF13847 Methyltransferase domain M1S38_01450 PF00905 Penicillin binding protein transpeptidase domain M1S38_01450 PF00912 Transglycosylase M1S38_01450 PF17092 Penicillin-binding protein OB-like domain M1S38_01455 PF11104 Type IV pilus assembly protein PilM; M1S38_01460 PF05137 Fimbrial assembly protein (PilN) M1S38_01465 PF04350 Pilus assembly protein, PilO M1S38_01475 PF11741 AMIN domain M1S38_01475 PF03958 Bacterial type II/III secretion system short domain M1S38_01475 PF07660 Secretin and TonB N terminus short domain M1S38_01475 PF00263 Bacterial type II and III secretion system protein M1S38_01480 PF01202 Shikimate kinase M1S38_01485 PF01761 3-dehydroquinate synthase M1S38_01495 PF01645 Conserved region in glutamate synthase M1S38_01495 PF04898 Glutamate synthase central domain M1S38_01495 PF00310 Glutamine amidotransferases class-II M1S38_01495 PF01493 GXGXG motif M1S38_01500 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_01500 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M1S38_01510 PF04011 LemA family M1S38_01515 PF04536 TPM domain M1S38_01525 PF00114 Pilin (bacterial filament) M1S38_01525 PF07963 Prokaryotic N-terminal methylation motif M1S38_01535 PF15864 Protein glycosylation ligase M1S38_01535 PF04932 O-Antigen ligase M1S38_01535 PF11846 Virulence factor membrane-bound polymerase, C-terminal M1S38_01545 PF00210 Ferritin-like domain M1S38_01550 PF04324 BFD-like [2Fe-2S] binding domain M1S38_01555 PF01042 Endoribonuclease L-PSP M1S38_01560 PF02824 TGS domain M1S38_01560 PF04607 Region found in RelA / SpoT proteins M1S38_01560 PF13291 ACT domain M1S38_01570 PF01192 RNA polymerase Rpb6 M1S38_01575 PF00625 Guanylate kinase M1S38_01580 PF02401 LytB protein M1S38_01620 PF00886 Ribosomal protein S16 M1S38_01625 PF01782 RimM N-terminal domain M1S38_01625 PF05239 PRC-barrel domain M1S38_01630 PF01746 tRNA (Guanine-1)-methyltransferase M1S38_01635 PF01245 Ribosomal protein L19 M1S38_01640 PF00561 alpha/beta hydrolase fold M1S38_01645 PF03280 Proteobacterial lipase chaperone protein M1S38_01650 PF16198 tRNA pseudouridylate synthase B C-terminal domain M1S38_01650 PF01509 TruB family pseudouridylate synthase (N terminal domain) M1S38_01650 PF09157 Pseudouridine synthase II TruB, C-terminal M1S38_01655 PF01925 Sulfite exporter TauE/SafE M1S38_01665 PF00892 EamA-like transporter family M1S38_01670 PF00892 EamA-like transporter family M1S38_01675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S38_01675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S38_01680 PF02913 FAD linked oxidases, C-terminal domain M1S38_01680 PF01565 FAD binding domain M1S38_01690 PF03992 Antibiotic biosynthesis monooxygenase M1S38_01695 PF02525 Flavodoxin-like fold M1S38_01705 PF07690 Major Facilitator Superfamily M1S38_01710 PF12805 FUSC-like inner membrane protein yccS M1S38_01715 PF00080 Copper/zinc superoxide dismutase (SODC) M1S38_01720 PF01594 AI-2E family transporter M1S38_01725 PF13614 AAA domain M1S38_01755 PF00324 Amino acid permease M1S38_01760 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S38_01760 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S38_01765 PF00202 Aminotransferase class-III M1S38_01770 PF04958 Arginine N-succinyltransferase beta subunit M1S38_01775 PF00171 Aldehyde dehydrogenase family M1S38_01780 PF04996 Succinylarginine dihydrolase M1S38_01785 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M1S38_01800 PF05922 Peptidase inhibitor I9 M1S38_01800 PF00082 Subtilase family M1S38_01815 PF03466 LysR substrate binding domain M1S38_01815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_01820 PF00892 EamA-like transporter family M1S38_01835 PF02091 Glycyl-tRNA synthetase alpha subunit M1S38_01860 PF00571 CBS domain M1S38_01865 PF04024 PspC domain M1S38_01875 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S38_01875 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_01875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_01875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_01885 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M1S38_01885 PF08501 Shikimate dehydrogenase substrate binding domain M1S38_01885 PF01488 Shikimate / quinate 5-dehydrogenase M1S38_01890 PF01218 Coproporphyrinogen III oxidase M1S38_01895 PF00925 GTP cyclohydrolase II M1S38_01900 PF02779 Transketolase, pyrimidine binding domain M1S38_01900 PF02780 Transketolase, C-terminal domain M1S38_01900 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M1S38_01905 PF00459 Inositol monophosphatase family M1S38_01910 PF03880 DbpA RNA binding domain M1S38_01910 PF00270 DEAD/DEAH box helicase M1S38_01910 PF12343 Cold shock protein DEAD box A M1S38_01910 PF00271 Helicase conserved C-terminal domain M1S38_01920 PF00005 ABC transporter M1S38_01925 PF02405 Permease MlaE M1S38_01935 PF05494 MlaC protein M1S38_01945 PF01544 CorA-like Mg2+ transporter protein M1S38_01950 PF03641 Possible lysine decarboxylase M1S38_01955 PF00293 NUDIX domain M1S38_01960 PF00156 Phosphoribosyl transferase domain M1S38_01965 PF17191 RecG wedge domain M1S38_01965 PF00271 Helicase conserved C-terminal domain M1S38_01965 PF00270 DEAD/DEAH box helicase M1S38_01980 PF01553 Acyltransferase M1S38_01990 PF00375 Sodium:dicarboxylate symporter family M1S38_02005 PF02082 Transcriptional regulator M1S38_02010 PF00970 Oxidoreductase FAD-binding domain M1S38_02010 PF00175 Oxidoreductase NAD-binding domain M1S38_02010 PF00042 Globin M1S38_02015 PF05872 Bacterial protein of unknown function (DUF853) M1S38_02020 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S38_02025 PF00117 Glutamine amidotransferase class-I M1S38_02030 PF00338 Ribosomal protein S10p/S20e M1S38_02035 PF00297 Ribosomal protein L3 M1S38_02040 PF00573 Ribosomal protein L4/L1 family M1S38_02045 PF00276 Ribosomal protein L23 M1S38_02050 PF00181 Ribosomal Proteins L2, RNA binding domain M1S38_02050 PF03947 Ribosomal Proteins L2, C-terminal domain M1S38_02055 PF00203 Ribosomal protein S19 M1S38_02060 PF00237 Ribosomal protein L22p/L17e M1S38_02070 PF00252 Ribosomal protein L16p/L10e M1S38_02075 PF00831 Ribosomal L29 protein M1S38_02080 PF00366 Ribosomal protein S17 M1S38_02085 PF00238 Ribosomal protein L14p/L23e M1S38_02090 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M1S38_02090 PF00467 KOW motif M1S38_02095 PF00281 Ribosomal protein L5 M1S38_02095 PF00673 ribosomal L5P family C-terminus M1S38_02100 PF00253 Ribosomal protein S14p/S29e M1S38_02105 PF00410 Ribosomal protein S8 M1S38_02110 PF00347 Ribosomal protein L6 M1S38_02115 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M1S38_02120 PF00333 Ribosomal protein S5, N-terminal domain M1S38_02120 PF03719 Ribosomal protein S5, C-terminal domain M1S38_02125 PF00327 Ribosomal protein L30p/L7e M1S38_02130 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M1S38_02135 PF00344 SecY translocase M1S38_02140 PF00444 Ribosomal protein L36 M1S38_02145 PF00416 Ribosomal protein S13/S18 M1S38_02150 PF00411 Ribosomal protein S11 M1S38_02155 PF01479 S4 domain M1S38_02155 PF00163 Ribosomal protein S4/S9 N-terminal domain M1S38_02160 PF01000 RNA polymerase Rpb3/RpoA insert domain M1S38_02160 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M1S38_02160 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M1S38_02165 PF01196 Ribosomal protein L17 M1S38_02170 PF00743 Flavin-binding monooxygenase-like M1S38_02175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_02175 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_02175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_02180 PF03937 Flavinator of succinate dehydrogenase M1S38_02210 PF09526 Probable metal-binding protein (DUF2387) M1S38_02215 PF01432 Peptidase family M3 M1S38_02220 PF08461 Ribonuclease R winged-helix domain M1S38_02220 PF00575 S1 RNA binding domain M1S38_02220 PF17876 Cold shock domain M1S38_02220 PF08206 Ribonuclease B OB domain M1S38_02220 PF00773 RNB domain M1S38_02265 PF01557 Fumarylacetoacetate (FAA) hydrolase family M1S38_02270 PF12833 Helix-turn-helix domain M1S38_02275 PF00892 EamA-like transporter family M1S38_02280 PF03631 Virulence factor BrkB M1S38_02285 PF03358 NADPH-dependent FMN reductase M1S38_02310 PF02130 Uncharacterized protein family UPF0054 M1S38_02315 PF02562 PhoH-like protein M1S38_02320 PF04055 Radical SAM superfamily M1S38_02320 PF01938 TRAM domain M1S38_02320 PF00919 Uncharacterized protein family UPF0004 M1S38_02325 PF01551 Peptidase family M23 M1S38_02325 PF10145 Phage-related minor tail protein M1S38_02325 PF01464 Transglycosylase SLT domain M1S38_02335 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1S38_02335 PF00056 lactate/malate dehydrogenase, NAD binding domain M1S38_02355 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M1S38_02360 PF01066 CDP-alcohol phosphatidyltransferase M1S38_02405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_02405 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_02405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_02410 PF17932 Tetracyclin repressor-like, C-terminal domain M1S38_02410 PF00440 Bacterial regulatory proteins, tetR family M1S38_02425 PF01039 Carboxyl transferase domain M1S38_02430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_02430 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_02430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_02440 PF00364 Biotin-requiring enzyme M1S38_02440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S38_02440 PF02785 Biotin carboxylase C-terminal domain M1S38_02440 PF00289 Biotin carboxylase, N-terminal domain M1S38_02450 PF04386 Stringent starvation protein B M1S38_02455 PF00043 Glutathione S-transferase, C-terminal domain M1S38_02455 PF13417 Glutathione S-transferase, N-terminal domain M1S38_02460 PF00380 Ribosomal protein S9/S16 M1S38_02465 PF00572 Ribosomal protein L13 M1S38_02470 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M1S38_02475 PF00398 Ribosomal RNA adenine dimethylase M1S38_02480 PF00149 Calcineurin-like phosphoesterase M1S38_02500 PF13167 GTP-binding GTPase N-terminal M1S38_02500 PF16360 GTP-binding GTPase Middle Region M1S38_02500 PF01926 50S ribosome-binding GTPase M1S38_02510 PF13091 PLD-like domain M1S38_02515 PF00149 Calcineurin-like phosphoesterase M1S38_02515 PF10518 TAT (twin-arginine translocation) pathway signal sequence M1S38_02520 PF00691 OmpA family M1S38_02520 PF01389 OmpA-like transmembrane domain M1S38_02525 PF17152 Periplasmic sensor domain M1S38_02525 PF00990 Diguanylate cyclase, GGDEF domain M1S38_02560 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_02560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S38_02570 PF00753 Metallo-beta-lactamase superfamily M1S38_02570 PF04273 Putative phosphatase (DUF442) M1S38_02575 PF00561 alpha/beta hydrolase fold M1S38_02580 PF00085 Thioredoxin M1S38_02585 PF03061 Thioesterase superfamily M1S38_02595 PF04461 Protein of unknown function (DUF520) M1S38_02605 PF01266 FAD dependent oxidoreductase M1S38_02605 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S38_02615 PF03795 YCII-related domain M1S38_02620 PF04279 Intracellular septation protein A M1S38_02625 PF02811 PHP domain M1S38_02630 PF01062 Bestrophin, RFP-TM, chloride channel M1S38_02635 PF04002 RadC-like JAB domain M1S38_02640 PF02441 Flavoprotein M1S38_02640 PF04127 DNA / pantothenate metabolism flavoprotein M1S38_02645 PF02355 Protein export membrane protein M1S38_02645 PF07549 SecD/SecF GG Motif M1S38_02650 PF13721 SecD export protein N-terminal TM region M1S38_02650 PF07549 SecD/SecF GG Motif M1S38_02650 PF02355 Protein export membrane protein M1S38_02655 PF02699 Preprotein translocase subunit M1S38_02660 PF01702 Queuine tRNA-ribosyltransferase M1S38_02675 PF02547 Queuosine biosynthesis protein M1S38_02685 PF00512 His Kinase A (phospho-acceptor) domain M1S38_02685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_02685 PF07689 KaiB domain M1S38_02690 PF08335 GlnD PII-uridylyltransferase M1S38_02690 PF03710 Glutamate-ammonia ligase adenylyltransferase M1S38_02695 PF01063 Amino-transferase class IV M1S38_02710 PF01522 Polysaccharide deacetylase M1S38_02715 PF00535 Glycosyl transferase family 2 M1S38_02720 PF13439 Glycosyltransferase Family 4 M1S38_02720 PF00534 Glycosyl transferases group 1 M1S38_02745 PF17102 Stealth protein CR3, conserved region 3 M1S38_02745 PF11380 Stealth protein CR2, conserved region 2 M1S38_02745 PF17101 Stealth protein CR1, conserved region 1 M1S38_02750 PF01336 OB-fold nucleic acid binding domain M1S38_02750 PF00152 tRNA synthetases class II (D, K and N) M1S38_02750 PF02938 GAD domain M1S38_02780 PF06146 Phosphate-starvation-inducible E M1S38_02785 PF00043 Glutathione S-transferase, C-terminal domain M1S38_02785 PF02798 Glutathione S-transferase, N-terminal domain M1S38_02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_02790 PF03466 LysR substrate binding domain M1S38_02795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_02795 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_02795 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S38_02795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_02800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_02800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_02800 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_02800 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S38_02810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_02810 PF00672 HAMP domain M1S38_02810 PF00512 His Kinase A (phospho-acceptor) domain M1S38_02815 PF00072 Response regulator receiver domain M1S38_02815 PF00486 Transcriptional regulatory protein, C terminal M1S38_02820 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M1S38_02840 PF01923 Cobalamin adenosyltransferase M1S38_02845 PF07715 TonB-dependent Receptor Plug Domain M1S38_02845 PF00593 TonB dependent receptor M1S38_02850 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M1S38_02855 PF00291 Pyridoxal-phosphate dependent enzyme M1S38_02880 PF00290 Tryptophan synthase alpha chain M1S38_02885 PF01039 Carboxyl transferase domain M1S38_02890 PF02875 Mur ligase family, glutamate ligase domain M1S38_02890 PF08245 Mur ligase middle domain M1S38_02905 PF00753 Metallo-beta-lactamase superfamily M1S38_02910 PF00578 AhpC/TSA family M1S38_02910 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S38_02915 PF02810 SEC-C motif M1S38_02915 PF07517 SecA DEAD-like domain M1S38_02915 PF01043 SecA preprotein cross-linking domain M1S38_02915 PF07516 SecA Wing and Scaffold domain M1S38_02925 PF00083 Sugar (and other) transporter M1S38_02925 PF07690 Major Facilitator Superfamily M1S38_02930 PF03006 Haemolysin-III related M1S38_02955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S38_02955 PF00378 Enoyl-CoA hydratase/isomerase M1S38_02955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S38_02960 PF00108 Thiolase, N-terminal domain M1S38_02960 PF02803 Thiolase, C-terminal domain M1S38_02965 PF02311 AraC-like ligand binding domain M1S38_02965 PF12833 Helix-turn-helix domain M1S38_02970 PF02515 CoA-transferase family III M1S38_02975 PF04966 Carbohydrate-selective porin, OprB family M1S38_02980 PF01011 PQQ enzyme repeat M1S38_02985 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S38_02985 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S38_02995 PF00893 Small Multidrug Resistance protein M1S38_03005 PF02803 Thiolase, C-terminal domain M1S38_03005 PF00108 Thiolase, N-terminal domain M1S38_03015 PF00691 OmpA family M1S38_03015 PF13505 Outer membrane protein beta-barrel domain M1S38_03025 PF01139 tRNA-splicing ligase RtcB M1S38_03030 PF00324 Amino acid permease M1S38_03035 PF05175 Methyltransferase small domain M1S38_03035 PF08468 Methyltransferase small domain N-terminal M1S38_03040 PF00860 Permease family M1S38_03050 PF01741 Large-conductance mechanosensitive channel, MscL M1S38_03065 PF06827 Zinc finger found in FPG and IleRS M1S38_03065 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M1S38_03065 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M1S38_03070 PF02245 Methylpurine-DNA glycosylase (MPG) M1S38_03090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S38_03105 PF10411 Disulfide bond isomerase protein N-terminus M1S38_03105 PF13098 Thioredoxin-like domain M1S38_03110 PF01571 Aminomethyltransferase folate-binding domain M1S38_03120 PF04343 Protein of unknown function, DUF488 M1S38_03125 PF03831 PhnA domain M1S38_03125 PF08274 PhnA Zinc-Ribbon M1S38_03130 PF07411 Domain of unknown function (DUF1508) M1S38_03135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S38_03135 PF03129 Anticodon binding domain M1S38_03135 PF04073 Aminoacyl-tRNA editing domain M1S38_03140 PF00873 AcrB/AcrD/AcrF family M1S38_03155 PF00072 Response regulator receiver domain M1S38_03160 PF00072 Response regulator receiver domain M1S38_03165 PF01584 CheW-like domain M1S38_03170 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M1S38_03170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M1S38_03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_03175 PF01584 CheW-like domain M1S38_03175 PF01627 Hpt domain M1S38_03175 PF00072 Response regulator receiver domain M1S38_03185 PF07687 Peptidase dimerisation domain M1S38_03185 PF01546 Peptidase family M20/M25/M40 M1S38_03190 PF08085 Entericidin EcnA/B family M1S38_03200 PF04304 Protein of unknown function (DUF454) M1S38_03205 PF03734 L,D-transpeptidase catalytic domain M1S38_03205 PF17969 L,D-transpeptidase C-terminal domain M1S38_03245 PF00258 Flavodoxin M1S38_03245 PF00175 Oxidoreductase NAD-binding domain M1S38_03245 PF00667 FAD binding domain M1S38_03255 PF12805 FUSC-like inner membrane protein yccS M1S38_03260 PF07690 Major Facilitator Superfamily M1S38_03265 PF00881 Nitroreductase family M1S38_03280 PF01235 Sodium:alanine symporter family M1S38_03285 PF01734 Patatin-like phospholipase M1S38_03290 PF00291 Pyridoxal-phosphate dependent enzyme M1S38_03290 PF13291 ACT domain M1S38_03295 PF05992 SbmA/BacA-like family M1S38_03325 PF02934 GatB/GatE catalytic domain M1S38_03325 PF02637 GatB domain M1S38_03330 PF01425 Amidase M1S38_03335 PF02686 Glu-tRNAGln amidotransferase C subunit M1S38_03345 PF04085 rod shape-determining protein MreC M1S38_03350 PF04093 rod shape-determining protein MreD M1S38_03355 PF02545 Maf-like protein M1S38_03360 PF00575 S1 RNA binding domain M1S38_03360 PF10150 Ribonuclease E/G family M1S38_03370 PF06974 Protein of unknown function (DUF1298) M1S38_03370 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain M1S38_03375 PF01507 Phosphoadenosine phosphosulfate reductase family M1S38_03390 PF02525 Flavodoxin-like fold M1S38_03410 PF02673 Bacitracin resistance protein BacA M1S38_03415 PF06719 AraC-type transcriptional regulator N-terminus M1S38_03415 PF12833 Helix-turn-helix domain M1S38_03420 PF00550 Phosphopantetheine attachment site M1S38_03420 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S38_03420 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S38_03420 PF14765 Polyketide synthase dehydratase M1S38_03420 PF09277 Erythronolide synthase, docking M1S38_03420 PF16197 Ketoacyl-synthetase C-terminal extension M1S38_03420 PF00698 Acyl transferase domain M1S38_03420 PF08659 KR domain M1S38_03420 PF08990 Erythronolide synthase docking M1S38_03420 PF08240 Alcohol dehydrogenase GroES-like domain M1S38_03425 PF01965 DJ-1/PfpI family M1S38_03435 PF00324 Amino acid permease M1S38_03440 PF04303 PrpF protein M1S38_03445 PF00348 Polyprenyl synthetase M1S38_03450 PF04237 YjbR M1S38_03455 PF01145 SPFH domain / Band 7 family M1S38_03465 PF01734 Patatin-like phospholipase M1S38_03485 PF08019 Phosphoethanolamine transferase EptA/EptB M1S38_03485 PF00884 Sulfatase M1S38_03490 PF00072 Response regulator receiver domain M1S38_03490 PF00486 Transcriptional regulatory protein, C terminal M1S38_03495 PF00512 His Kinase A (phospho-acceptor) domain M1S38_03495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_03495 PF08521 Two-component sensor kinase N-terminal M1S38_03505 PF00909 Ammonium Transporter Family M1S38_03510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_03510 PF03466 LysR substrate binding domain M1S38_03530 PF08264 Anticodon-binding domain of tRNA M1S38_03530 PF00133 tRNA synthetases class I (I, L, M and V) M1S38_03530 PF10458 Valyl tRNA synthetase tRNA binding arm M1S38_03550 PF01906 Putative heavy-metal-binding M1S38_03555 PF01906 Putative heavy-metal-binding M1S38_03560 PF02321 Outer membrane efflux protein M1S38_03565 PF00873 AcrB/AcrD/AcrF family M1S38_03570 PF00529 HlyD membrane-fusion protein of T1SS M1S38_03570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S38_03575 PF01569 PAP2 superfamily M1S38_03585 PF00348 Polyprenyl synthetase M1S38_03595 PF00829 Ribosomal prokaryotic L21 protein M1S38_03600 PF01016 Ribosomal L27 protein M1S38_03605 PF03548 Outer membrane lipoprotein carrier protein LolA M1S38_03615 PF02403 Seryl-tRNA synthetase N-terminal domain M1S38_03615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S38_03620 PF10414 Sirohaem synthase dimerisation region M1S38_03620 PF14824 Sirohaem biosynthesis protein central M1S38_03620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S38_03625 PF00588 SpoU rRNA Methylase family M1S38_03630 PF01638 HxlR-like helix-turn-helix M1S38_03635 PF03358 NADPH-dependent FMN reductase M1S38_03640 PF13520 Amino acid permease M1S38_03645 PF00465 Iron-containing alcohol dehydrogenase M1S38_03655 PF03099 Biotin/lipoate A/B protein ligase family M1S38_03660 PF04359 Protein of unknown function (DUF493) M1S38_03665 PF04545 Sigma-70, region 4 M1S38_03665 PF04546 Sigma-70, non-essential region M1S38_03665 PF03979 Sigma-70 factor, region 1.1 M1S38_03665 PF00140 Sigma-70 factor, region 1.2 M1S38_03665 PF04542 Sigma-70 region 2 M1S38_03665 PF04539 Sigma-70 region 3 M1S38_03685 PF00581 Rhodanese-like domain M1S38_03685 PF17773 UPF0176 acylphosphatase like domain M1S38_03695 PF00285 Citrate synthase, C-terminal domain M1S38_03700 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S38_03705 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S38_03710 PF02910 Fumarate reductase flavoprotein C-term M1S38_03710 PF00890 FAD binding domain M1S38_03715 PF13085 2Fe-2S iron-sulfur cluster binding domain M1S38_03730 PF16870 2-oxoglutarate dehydrogenase C-terminal M1S38_03730 PF02779 Transketolase, pyrimidine binding domain M1S38_03730 PF16078 2-oxoglutarate dehydrogenase N-terminus M1S38_03730 PF00676 Dehydrogenase E1 component M1S38_03735 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S38_03735 PF02817 e3 binding domain M1S38_03735 PF00364 Biotin-requiring enzyme M1S38_03740 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_03740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S38_03745 PF00549 CoA-ligase M1S38_03745 PF08442 ATP-grasp domain M1S38_03750 PF00549 CoA-ligase M1S38_03750 PF02629 CoA binding domain M1S38_03755 PF00579 tRNA synthetases class I (W and Y) M1S38_03760 PF05661 Protein of unknown function (DUF808) M1S38_03765 PF04228 Putative neutral zinc metallopeptidase M1S38_03770 PF00999 Sodium/hydrogen exchanger family M1S38_03785 PF09587 Bacterial capsule synthesis protein PGA_cap M1S38_03795 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S38_03800 PF00582 Universal stress protein family M1S38_03805 PF00132 Bacterial transferase hexapeptide (six repeats) M1S38_03810 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S38_03810 PF03449 Transcription elongation factor, N-terminal M1S38_03815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S38_03815 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M1S38_03815 PF02142 MGS-like domain M1S38_03820 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M1S38_03820 PF00117 Glutamine amidotransferase class-I M1S38_03835 PF01985 CRS1 / YhbY (CRM) domain M1S38_03840 PF01728 FtsJ-like methyltransferase M1S38_03845 PF00004 ATPase family associated with various cellular activities (AAA) M1S38_03845 PF17862 AAA+ lid domain M1S38_03845 PF06480 FtsH Extracellular M1S38_03845 PF01434 Peptidase family M41 M1S38_03850 PF00809 Pterin binding enzyme M1S38_03870 PF09423 PhoD-like phosphatase M1S38_03870 PF16655 PhoD-like phosphatase, N-terminal domain M1S38_03885 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M1S38_03885 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M1S38_03900 PF00083 Sugar (and other) transporter M1S38_03905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1S38_03905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1S38_03910 PF01266 FAD dependent oxidoreductase M1S38_03910 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M1S38_03915 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1S38_03915 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1S38_03920 PF00781 Diacylglycerol kinase catalytic domain M1S38_03925 PF00149 Calcineurin-like phosphoesterase M1S38_03935 PF00166 Chaperonin 10 Kd subunit M1S38_03940 PF00118 TCP-1/cpn60 chaperonin family M1S38_03945 PF01219 Prokaryotic diacylglycerol kinase M1S38_03955 PF03009 Glycerophosphoryl diester phosphodiesterase family M1S38_03960 PF00873 AcrB/AcrD/AcrF family M1S38_03970 PF01435 Peptidase family M48 M1S38_03975 PF01464 Transglycosylase SLT domain M1S38_03980 PF01171 PP-loop family M1S38_03990 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S38_03990 PF01464 Transglycosylase SLT domain M1S38_03995 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S38_03995 PF03449 Transcription elongation factor, N-terminal M1S38_04010 PF00550 Phosphopantetheine attachment site M1S38_04010 PF00668 Condensation domain M1S38_04010 PF13193 AMP-binding enzyme C-terminal domain M1S38_04010 PF00975 Thioesterase domain M1S38_04010 PF00501 AMP-binding enzyme M1S38_04040 PF00881 Nitroreductase family M1S38_04055 PF02595 Glycerate kinase family M1S38_04060 PF00384 Molybdopterin oxidoreductase M1S38_04065 PF02634 FdhD/NarQ family M1S38_04070 PF06803 Protein of unknown function (DUF1232) M1S38_04075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S38_04075 PF11890 Domain of unknown function (DUF3410) M1S38_04075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S38_04080 PF00152 tRNA synthetases class II (D, K and N) M1S38_04090 PF18073 Rubredoxin metal binding domain M1S38_04095 PF00324 Amino acid permease M1S38_04105 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M1S38_04105 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M1S38_04110 PF01678 Diaminopimelate epimerase M1S38_04115 PF01810 LysE type translocator M1S38_04120 PF02899 Phage integrase, N-terminal SAM-like domain M1S38_04120 PF00589 Phage integrase family M1S38_04125 PF01012 Electron transfer flavoprotein domain M1S38_04130 PF01012 Electron transfer flavoprotein domain M1S38_04130 PF00766 Electron transfer flavoprotein FAD-binding domain M1S38_04135 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S38_04135 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S38_04150 PF00535 Glycosyl transferase family 2 M1S38_04170 PF13533 Biotin-lipoyl like M1S38_04180 PF00266 Aminotransferase class-V M1S38_04195 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M1S38_04205 PF12704 MacB-like periplasmic core domain M1S38_04205 PF02687 FtsX-like permease family M1S38_04210 PF00005 ABC transporter M1S38_04215 PF00753 Metallo-beta-lactamase superfamily M1S38_04215 PF03772 Competence protein M1S38_04215 PF13567 Domain of unknown function (DUF4131) M1S38_04225 PF06965 Na+/H+ antiporter 1 M1S38_04225 PF01343 Peptidase family S49 M1S38_04230 PF12697 Alpha/beta hydrolase family M1S38_04235 PF00551 Formyl transferase M1S38_04240 PF00586 AIR synthase related protein, N-terminal domain M1S38_04240 PF02769 AIR synthase related protein, C-terminal domain M1S38_04245 PF01594 AI-2E family transporter M1S38_04250 PF00308 Bacterial dnaA protein M1S38_04250 PF11638 DnaA N-terminal domain M1S38_04250 PF08299 Bacterial dnaA protein helix-turn-helix M1S38_04280 PF00588 SpoU rRNA Methylase family M1S38_04280 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S38_04285 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M1S38_04295 PF00691 OmpA family M1S38_04300 PF07676 WD40-like Beta Propeller Repeat M1S38_04300 PF04052 TolB amino-terminal domain M1S38_04310 PF02472 Biopolymer transport protein ExbD/TolR M1S38_04315 PF01618 MotA/TolQ/ExbB proton channel family M1S38_04320 PF03061 Thioesterase superfamily M1S38_04325 PF01546 Peptidase family M20/M25/M40 M1S38_04325 PF07687 Peptidase dimerisation domain M1S38_04330 PF17864 RuvB AAA lid domain M1S38_04330 PF05491 RuvB C-terminal winged helix domain M1S38_04330 PF05496 Holliday junction DNA helicase RuvB P-loop domain M1S38_04335 PF01330 RuvA N terminal domain M1S38_04335 PF07499 RuvA, C-terminal domain M1S38_04340 PF01966 HD domain M1S38_04345 PF02769 AIR synthase related protein, C-terminal domain M1S38_04345 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M1S38_04345 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M1S38_04350 PF07690 Major Facilitator Superfamily M1S38_04355 PF01784 NIF3 (NGG1p interacting factor 3) M1S38_04360 PF00378 Enoyl-CoA hydratase/isomerase M1S38_04365 PF01467 Cytidylyltransferase-like M1S38_04365 PF00293 NUDIX domain M1S38_04375 PF00578 AhpC/TSA family M1S38_04390 PF06508 Queuosine biosynthesis protein QueC M1S38_04400 PF00132 Bacterial transferase hexapeptide (six repeats) M1S38_04400 PF14602 Hexapeptide repeat of succinyl-transferase M1S38_04400 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M1S38_04410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_04410 PF03466 LysR substrate binding domain M1S38_04415 PF12857 TOBE-like domain M1S38_04415 PF00005 ABC transporter M1S38_04420 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_04425 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_04440 PF01063 Amino-transferase class IV M1S38_04445 PF02618 YceG-like family M1S38_04450 PF02223 Thymidylate kinase M1S38_04460 PF02910 Fumarate reductase flavoprotein C-term M1S38_04460 PF00890 FAD binding domain M1S38_04465 PF13180 PDZ domain M1S38_04475 PF06421 GTP-binding protein LepA C-terminus M1S38_04475 PF03144 Elongation factor Tu domain 2 M1S38_04475 PF00009 Elongation factor Tu GTP binding domain M1S38_04475 PF00679 Elongation factor G C-terminus M1S38_04480 PF10502 Signal peptidase, peptidase S26 M1S38_04490 PF00035 Double-stranded RNA binding motif M1S38_04490 PF14622 Ribonuclease-III-like M1S38_04495 PF07650 KH domain M1S38_04495 PF01926 50S ribosome-binding GTPase M1S38_04505 PF02565 Recombination protein O C terminal M1S38_04505 PF11967 Recombination protein O N terminal M1S38_04510 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M1S38_04515 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M1S38_04520 PF00106 short chain dehydrogenase M1S38_04550 PF00155 Aminotransferase class I and II M1S38_04560 PF00990 Diguanylate cyclase, GGDEF domain M1S38_04560 PF17151 Periplasmic sensor domain M1S38_04570 PF02151 UvrB/uvrC motif M1S38_04570 PF00271 Helicase conserved C-terminal domain M1S38_04570 PF12344 Ultra-violet resistance protein B M1S38_04570 PF17757 UvrB interaction domain M1S38_04570 PF04851 Type III restriction enzyme, res subunit M1S38_04580 PF00892 EamA-like transporter family M1S38_04585 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S38_04585 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S38_04600 PF01018 GTP1/OBG M1S38_04600 PF01926 50S ribosome-binding GTPase M1S38_04605 PF00696 Amino acid kinase family M1S38_04605 PF01472 PUA domain M1S38_04615 PF07759 Protein of unknown function (DUF1615) M1S38_04620 PF01207 Dihydrouridine synthase (Dus) M1S38_04625 PF03060 Nitronate monooxygenase M1S38_04640 PF02350 UDP-N-acetylglucosamine 2-epimerase M1S38_04670 PF00875 DNA photolyase M1S38_04670 PF03441 FAD binding domain of DNA photolyase M1S38_04675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S38_04680 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_04685 PF07943 Penicillin-binding protein 5, C-terminal domain M1S38_04685 PF00768 D-alanyl-D-alanine carboxypeptidase M1S38_04695 PF03971 Monomeric isocitrate dehydrogenase M1S38_04700 PF00849 RNA pseudouridylate synthase M1S38_04705 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S38_04725 PF06779 Uncharacterised MFS-type transporter YbfB M1S38_04730 PF03466 LysR substrate binding domain M1S38_04730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_04735 PF00375 Sodium:dicarboxylate symporter family M1S38_04740 PF02567 Phenazine biosynthesis-like protein M1S38_04745 PF00675 Insulinase (Peptidase family M16) M1S38_04745 PF05193 Peptidase M16 inactive domain M1S38_04770 PF02581 Thiamine monophosphate synthase M1S38_04775 PF00202 Aminotransferase class-III M1S38_04785 PF00849 RNA pseudouridylate synthase M1S38_04790 PF00271 Helicase conserved C-terminal domain M1S38_04790 PF12137 RNA polymerase recycling family C-terminal M1S38_04790 PF00176 SNF2 family N-terminal domain M1S38_04790 PF18337 RapA N-terminal Tudor like domain M1S38_04790 PF18339 RapA N-terminal Tudor like domain 1 M1S38_04800 PF00440 Bacterial regulatory proteins, tetR family M1S38_04805 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S38_04805 PF00970 Oxidoreductase FAD-binding domain M1S38_04805 PF00175 Oxidoreductase NAD-binding domain M1S38_04810 PF00487 Fatty acid desaturase M1S38_04820 PF17754 MftR C-terminal domain M1S38_04820 PF00440 Bacterial regulatory proteins, tetR family M1S38_04830 PF00202 Aminotransferase class-III M1S38_04835 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S38_04840 PF00171 Aldehyde dehydrogenase family M1S38_04845 PF01037 Lrp/AsnC ligand binding domain M1S38_04850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S38_04850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S38_04850 PF00205 Thiamine pyrophosphate enzyme, central domain M1S38_04855 PF00324 Amino acid permease M1S38_04860 PF12849 PBP superfamily domain M1S38_04865 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_04870 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_04875 PF00005 ABC transporter M1S38_04880 PF01343 Peptidase family S49 M1S38_04880 PF08496 Peptidase family S49 N-terminal M1S38_04895 PF08328 Adenylosuccinate lyase C-terminal M1S38_04895 PF00206 Lyase M1S38_04900 PF04356 Protein of unknown function (DUF489) M1S38_04910 PF13344 Haloacid dehalogenase-like hydrolase M1S38_04910 PF00293 NUDIX domain M1S38_04915 PF00132 Bacterial transferase hexapeptide (six repeats) M1S38_04920 PF07943 Penicillin-binding protein 5, C-terminal domain M1S38_04920 PF00768 D-alanyl-D-alanine carboxypeptidase M1S38_04935 PF01975 Survival protein SurE M1S38_04940 PF01476 LysM domain M1S38_04940 PF01551 Peptidase family M23 M1S38_04945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_04945 PF03466 LysR substrate binding domain M1S38_04950 PF13654 AAA domain M1S38_04950 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S38_04955 PF07690 Major Facilitator Superfamily M1S38_04960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S38_04965 PF13593 SBF-like CPA transporter family (DUF4137) M1S38_04970 PF01197 Ribosomal protein L31 M1S38_04985 PF04055 Radical SAM superfamily M1S38_04990 PF01132 Elongation factor P (EF-P) OB domain M1S38_04990 PF08207 Elongation factor P (EF-P) KOW-like domain M1S38_04990 PF09285 Elongation factor P, C-terminal M1S38_04995 PF02554 Carbon starvation protein CstA M1S38_04995 PF13722 5TM C-terminal transporter carbon starvation CstA M1S38_05000 PF04328 Selenoprotein, putative M1S38_05035 PF13556 PucR C-terminal helix-turn-helix domain M1S38_05035 PF17853 GGDEF-like domain M1S38_05035 PF06018 CodY GAF-like domain M1S38_05050 PF00171 Aldehyde dehydrogenase family M1S38_05055 PF00324 Amino acid permease M1S38_05060 PF03466 LysR substrate binding domain M1S38_05060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_05065 PF02028 BCCT, betaine/carnitine/choline family transporter M1S38_05070 PF02028 BCCT, betaine/carnitine/choline family transporter M1S38_05075 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S38_05075 PF00355 Rieske [2Fe-2S] domain M1S38_05080 PF00171 Aldehyde dehydrogenase family M1S38_05090 PF18113 Rubredoxin binding C-terminal domain M1S38_05090 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_05095 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S38_05095 PF01266 FAD dependent oxidoreductase M1S38_05115 PF00892 EamA-like transporter family M1S38_05125 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M1S38_05130 PF00083 Sugar (and other) transporter M1S38_05135 PF13378 Enolase C-terminal domain-like M1S38_05135 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S38_05140 PF08659 KR domain M1S38_05140 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S38_05140 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S38_05140 PF16197 Ketoacyl-synthetase C-terminal extension M1S38_05140 PF09277 Erythronolide synthase, docking M1S38_05140 PF14765 Polyketide synthase dehydratase M1S38_05140 PF08240 Alcohol dehydrogenase GroES-like domain M1S38_05140 PF00698 Acyl transferase domain M1S38_05140 PF00550 Phosphopantetheine attachment site M1S38_05140 PF08990 Erythronolide synthase docking M1S38_05145 PF00440 Bacterial regulatory proteins, tetR family M1S38_05165 PF17954 Quercetinase C-terminal cupin domain M1S38_05165 PF02678 Pirin M1S38_05175 PF08348 YheO-like PAS domain M1S38_05175 PF13309 HTH domain M1S38_05185 PF00501 AMP-binding enzyme M1S38_05185 PF00668 Condensation domain M1S38_05185 PF00550 Phosphopantetheine attachment site M1S38_05185 PF13193 AMP-binding enzyme C-terminal domain M1S38_05190 PF13193 AMP-binding enzyme C-terminal domain M1S38_05190 PF00975 Thioesterase domain M1S38_05190 PF00550 Phosphopantetheine attachment site M1S38_05190 PF00668 Condensation domain M1S38_05190 PF00501 AMP-binding enzyme M1S38_05195 PF01032 FecCD transport family M1S38_05200 PF01032 FecCD transport family M1S38_05205 PF00005 ABC transporter M1S38_05210 PF01497 Periplasmic binding protein M1S38_05215 PF00593 TonB dependent receptor M1S38_05215 PF07715 TonB-dependent Receptor Plug Domain M1S38_05220 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S38_05225 PF00550 Phosphopantetheine attachment site M1S38_05225 PF00668 Condensation domain M1S38_05225 PF00501 AMP-binding enzyme M1S38_05230 PF13193 AMP-binding enzyme C-terminal domain M1S38_05230 PF00501 AMP-binding enzyme M1S38_05235 PF00857 Isochorismatase family M1S38_05235 PF00550 Phosphopantetheine attachment site M1S38_05240 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S38_05250 PF00005 ABC transporter M1S38_05255 PF00005 ABC transporter M1S38_05260 PF00975 Thioesterase domain M1S38_05270 PF00425 chorismate binding enzyme M1S38_05280 PF01208 Uroporphyrinogen decarboxylase (URO-D) M1S38_05285 PF05675 Protein of unknown function (DUF817) M1S38_05300 PF00144 Beta-lactamase M1S38_05310 PF01227 GTP cyclohydrolase I M1S38_05315 PF01799 [2Fe-2S] binding domain M1S38_05315 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S38_05320 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M1S38_05320 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M1S38_05335 PF00218 Indole-3-glycerol phosphate synthase M1S38_05340 PF00591 Glycosyl transferase family, a/b domain M1S38_05340 PF02885 Glycosyl transferase family, helical bundle domain M1S38_05345 PF00593 TonB dependent receptor M1S38_05345 PF07715 TonB-dependent Receptor Plug Domain M1S38_05350 PF01433 Peptidase family M1 domain M1S38_05350 PF11838 ERAP1-like C-terminal domain M1S38_05355 PF00117 Glutamine amidotransferase class-I M1S38_05365 PF00854 POT family M1S38_05370 PF03951 Glutamine synthetase, beta-Grasp domain M1S38_05370 PF00120 Glutamine synthetase, catalytic domain M1S38_05375 PF04345 Chorismate lyase M1S38_05380 PF01040 UbiA prenyltransferase family M1S38_05415 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M1S38_05415 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M1S38_05420 PF01784 NIF3 (NGG1p interacting factor 3) M1S38_05425 PF13180 PDZ domain M1S38_05430 PF01743 Poly A polymerase head domain M1S38_05430 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S38_05435 PF01515 Phosphate acetyl/butaryl transferase M1S38_05435 PF00390 Malic enzyme, N-terminal domain M1S38_05435 PF03949 Malic enzyme, NAD binding domain M1S38_05440 PF00563 EAL domain M1S38_05440 PF00990 Diguanylate cyclase, GGDEF domain M1S38_05440 PF03707 Bacterial signalling protein N terminal repeat M1S38_05445 PF04452 RNA methyltransferase M1S38_05450 PF02219 Methylenetetrahydrofolate reductase M1S38_05455 PF05221 S-adenosyl-L-homocysteine hydrolase M1S38_05455 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M1S38_05470 PF09317 Domain of unknown function (DUF1974) M1S38_05470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_05470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_05475 PF04055 Radical SAM superfamily M1S38_05480 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_05480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S38_05490 PF07690 Major Facilitator Superfamily M1S38_05500 PF00557 Metallopeptidase family M24 M1S38_05505 PF00318 Ribosomal protein S2 M1S38_05510 PF00889 Elongation factor TS M1S38_05520 PF12833 Helix-turn-helix domain M1S38_05540 PF03330 Lytic transglycolase M1S38_05540 PF05036 Sporulation related domain M1S38_05545 PF13406 Transglycosylase SLT domain M1S38_05550 PF01098 Cell cycle protein M1S38_05560 PF14489 QueF-like protein M1S38_05560 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M1S38_05565 PF01061 ABC-2 type transporter M1S38_05570 PF00005 ABC transporter M1S38_05600 PF00464 Serine hydroxymethyltransferase M1S38_05605 PF02321 Outer membrane efflux protein M1S38_05610 PF00873 AcrB/AcrD/AcrF family M1S38_05615 PF13533 Biotin-lipoyl like M1S38_05620 PF03466 LysR substrate binding domain M1S38_05620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_05625 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S38_05630 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_05635 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_05640 PF00005 ABC transporter M1S38_05645 PF00893 Small Multidrug Resistance protein M1S38_05650 PF00037 4Fe-4S binding domain M1S38_05655 PF01136 Peptidase family U32 M1S38_05655 PF16325 Peptidase family U32 C-terminal domain M1S38_05660 PF00155 Aminotransferase class I and II M1S38_05660 PF00392 Bacterial regulatory proteins, gntR family M1S38_05665 PF02567 Phenazine biosynthesis-like protein M1S38_05670 PF00970 Oxidoreductase FAD-binding domain M1S38_05670 PF00175 Oxidoreductase NAD-binding domain M1S38_05675 PF18389 TrmO C-terminal domain M1S38_05675 PF01980 tRNA-methyltransferase O M1S38_05685 PF00437 Type II/IV secretion system protein M1S38_05685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S38_05695 PF00486 Transcriptional regulatory protein, C terminal M1S38_05695 PF00072 Response regulator receiver domain M1S38_05700 PF00512 His Kinase A (phospho-acceptor) domain M1S38_05700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_05700 PF08521 Two-component sensor kinase N-terminal M1S38_05710 PF00293 NUDIX domain M1S38_05720 PF00905 Penicillin binding protein transpeptidase domain M1S38_05720 PF00912 Transglycosylase M1S38_05720 PF14814 Bifunctional transglycosylase second domain M1S38_05725 PF01513 ATP-NAD kinase M1S38_05730 PF07023 Protein of unknown function (DUF1315) M1S38_05735 PF00591 Glycosyl transferase family, a/b domain M1S38_05735 PF02885 Glycosyl transferase family, helical bundle domain M1S38_05740 PF00375 Sodium:dicarboxylate symporter family M1S38_05745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_05745 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_05745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_05750 PF00756 Putative esterase M1S38_05755 PF00800 Prephenate dehydratase M1S38_05755 PF01842 ACT domain M1S38_05755 PF01817 Chorismate mutase type II M1S38_05760 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S38_05770 PF01546 Peptidase family M20/M25/M40 M1S38_05770 PF07687 Peptidase dimerisation domain M1S38_05775 PF12706 Beta-lactamase superfamily domain M1S38_05785 PF03883 Peroxide stress protein YaaA M1S38_05795 PF05690 Thiazole biosynthesis protein ThiG M1S38_05805 PF04241 Protein of unknown function (DUF423) M1S38_05810 PF04542 Sigma-70 region 2 M1S38_05810 PF00140 Sigma-70 factor, region 1.2 M1S38_05810 PF04545 Sigma-70, region 4 M1S38_05825 PF00313 'Cold-shock' DNA-binding domain M1S38_05830 PF00271 Helicase conserved C-terminal domain M1S38_05830 PF00270 DEAD/DEAH box helicase M1S38_05840 PF00881 Nitroreductase family M1S38_05845 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M1S38_05845 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M1S38_05865 PF01180 Dihydroorotate dehydrogenase M1S38_05870 PF02674 Colicin V production protein M1S38_05875 PF00156 Phosphoribosyl transferase domain M1S38_05890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S38_05890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S38_05895 PF01435 Peptidase family M48 M1S38_05900 PF09424 Yqey-like protein M1S38_05905 PF01165 Ribosomal protein S21 M1S38_05910 PF00814 Glycoprotease family M1S38_05930 PF00069 Protein kinase domain M1S38_05955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_05955 PF03466 LysR substrate binding domain M1S38_05960 PF00202 Aminotransferase class-III M1S38_05965 PF00171 Aldehyde dehydrogenase family M1S38_05970 PF00324 Amino acid permease M1S38_06000 PF04076 Bacterial OB fold (BOF) protein M1S38_06025 PF00561 alpha/beta hydrolase fold M1S38_06030 PF03616 Sodium/glutamate symporter M1S38_06040 PF00392 Bacterial regulatory proteins, gntR family M1S38_06040 PF07729 FCD domain M1S38_06090 PF08946 Osmosensory transporter coiled coil M1S38_06090 PF00083 Sugar (and other) transporter M1S38_06115 PF00155 Aminotransferase class I and II M1S38_06120 PF06826 Predicted Permease Membrane Region M1S38_06120 PF02080 TrkA-C domain M1S38_06130 PF04403 Paraquat-inducible protein A M1S38_06135 PF02470 MlaD protein M1S38_06145 PF01177 Asp/Glu/Hydantoin racemase M1S38_06150 PF00892 EamA-like transporter family M1S38_06155 PF07995 Glucose / Sorbosone dehydrogenase M1S38_06165 PF13610 DDE domain M1S38_06175 PF01636 Phosphotransferase enzyme family M1S38_06180 PF13610 DDE domain M1S38_06195 PF00132 Bacterial transferase hexapeptide (six repeats) M1S38_06205 PF00893 Small Multidrug Resistance protein M1S38_06210 PF00809 Pterin binding enzyme M1S38_06225 PF07091 Ribosomal RNA methyltransferase (FmrO) M1S38_06240 PF00005 ABC transporter M1S38_06240 PF12848 ABC transporter M1S38_06245 PF01636 Phosphotransferase enzyme family M1S38_06255 PF03050 Transposase IS66 family M1S38_06255 PF13817 IS66 C-terminal element M1S38_06255 PF13007 Transposase C of IS166 homeodomain M1S38_06255 PF13005 zinc-finger binding domain of transposase IS66 M1S38_06260 PF13610 DDE domain M1S38_06275 PF00375 Sodium:dicarboxylate symporter family M1S38_06285 PF16123 Hydroxyacylglutathione hydrolase C-terminus M1S38_06285 PF00753 Metallo-beta-lactamase superfamily M1S38_06290 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_06295 PF09383 NIL domain M1S38_06295 PF00005 ABC transporter M1S38_06300 PF03180 NLPA lipoprotein M1S38_06305 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M1S38_06305 PF02843 Phosphoribosylglycinamide synthetase, C domain M1S38_06305 PF02844 Phosphoribosylglycinamide synthetase, N domain M1S38_06310 PF01808 AICARFT/IMPCHase bienzyme M1S38_06310 PF02142 MGS-like domain M1S38_06315 PF02954 Bacterial regulatory protein, Fis family M1S38_06335 PF01134 Glucose inhibited division protein A M1S38_06335 PF13932 GidA associated domain M1S38_06345 PF14403 Circularly permuted ATP-grasp type 2 M1S38_06355 PF01841 Transglutaminase-like superfamily M1S38_06355 PF08379 Bacterial transglutaminase-like N-terminal region M1S38_06365 PF01168 Alanine racemase, N-terminal domain M1S38_06365 PF00842 Alanine racemase, C-terminal domain M1S38_06370 PF00772 DnaB-like helicase N terminal domain M1S38_06370 PF03796 DnaB-like helicase C terminal domain M1S38_06375 PF01281 Ribosomal protein L9, N-terminal domain M1S38_06375 PF03948 Ribosomal protein L9, C-terminal domain M1S38_06380 PF01084 Ribosomal protein S18 M1S38_06385 PF01250 Ribosomal protein S6 M1S38_06390 PF01040 UbiA prenyltransferase family M1S38_06395 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M1S38_06400 PF00510 Cytochrome c oxidase subunit III M1S38_06405 PF00115 Cytochrome C and Quinol oxidase polypeptide I M1S38_06410 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M1S38_06410 PF06481 COX Aromatic Rich Motif M1S38_06420 PF00391 PEP-utilising enzyme, mobile domain M1S38_06420 PF02896 PEP-utilising enzyme, TIM barrel domain M1S38_06420 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M1S38_06425 PF03618 Kinase/pyrophosphorylase M1S38_06435 PF14883 Hypothetical glycosyl hydrolase family 13 M1S38_06435 PF01522 Polysaccharide deacetylase M1S38_06440 PF00535 Glycosyl transferase family 2 M1S38_06445 PF13994 PgaD-like protein M1S38_06455 PF00296 Luciferase-like monooxygenase M1S38_06470 PF03466 LysR substrate binding domain M1S38_06470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_06480 PF03462 PCRF domain M1S38_06480 PF00472 RF-1 domain M1S38_06485 PF17827 PrmC N-terminal domain M1S38_06485 PF13847 Methyltransferase domain M1S38_06490 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_06495 PF09084 NMT1/THI5 like M1S38_06500 PF12833 Helix-turn-helix domain M1S38_06505 PF00106 short chain dehydrogenase M1S38_06510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_06510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_06510 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_06515 PF13193 AMP-binding enzyme C-terminal domain M1S38_06515 PF00501 AMP-binding enzyme M1S38_06520 PF01613 Flavin reductase like domain M1S38_06525 PF00899 ThiF family M1S38_06530 PF03109 ABC1 family M1S38_06545 PF03814 Potassium-transporting ATPase A subunit M1S38_06555 PF02669 K+-transporting ATPase, c chain M1S38_06560 PF02702 Osmosensitive K+ channel His kinase sensor domain M1S38_06560 PF13493 Domain of unknown function (DUF4118) M1S38_06560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_06560 PF00512 His Kinase A (phospho-acceptor) domain M1S38_06565 PF00072 Response regulator receiver domain M1S38_06565 PF00486 Transcriptional regulatory protein, C terminal M1S38_06570 PF00120 Glutamine synthetase, catalytic domain M1S38_06580 PF03232 Ubiquinone biosynthesis protein COQ7 M1S38_06585 PF07690 Major Facilitator Superfamily M1S38_06590 PF01103 Surface antigen M1S38_06590 PF17243 POTRA domain TamA domain 1 M1S38_06590 PF07244 Surface antigen variable number repeat M1S38_06605 PF00330 Aconitase family (aconitate hydratase) M1S38_06605 PF11791 Aconitate B N-terminal domain M1S38_06605 PF06434 Aconitate hydratase 2 N-terminus M1S38_06615 PF00027 Cyclic nucleotide-binding domain M1S38_06615 PF00520 Ion transport protein M1S38_06620 PF07690 Major Facilitator Superfamily M1S38_06635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_06635 PF03466 LysR substrate binding domain M1S38_06640 PF04284 Protein of unknown function (DUF441) M1S38_06650 PF00849 RNA pseudouridylate synthase M1S38_06650 PF01479 S4 domain M1S38_06665 PF00849 RNA pseudouridylate synthase M1S38_06665 PF01479 S4 domain M1S38_06670 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M1S38_06675 PF01119 DNA mismatch repair protein, C-terminal domain M1S38_06675 PF08676 MutL C terminal dimerisation domain M1S38_06685 PF17209 Hfq protein M1S38_06695 PF00881 Nitroreductase family M1S38_06705 PF00149 Calcineurin-like phosphoesterase M1S38_06710 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S38_06715 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S38_06715 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M1S38_06720 PF00958 GMP synthase C terminal domain M1S38_06720 PF02540 NAD synthase M1S38_06720 PF00117 Glutamine amidotransferase class-I M1S38_06725 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M1S38_06730 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M1S38_06735 PF13520 Amino acid permease M1S38_06740 PF00171 Aldehyde dehydrogenase family M1S38_06755 PF00465 Iron-containing alcohol dehydrogenase M1S38_06760 PF14493 Helix-turn-helix domain M1S38_06760 PF05970 PIF1-like helicase M1S38_06770 PF06445 GyrI-like small molecule binding domain M1S38_06775 PF02110 Hydroxyethylthiazole kinase family M1S38_06790 PF11940 Domain of unknown function (DUF3458) Ig-like fold M1S38_06790 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M1S38_06790 PF01433 Peptidase family M1 domain M1S38_06800 PF00106 short chain dehydrogenase M1S38_06810 PF01817 Chorismate mutase type II M1S38_06815 PF01037 Lrp/AsnC ligand binding domain M1S38_06830 PF00440 Bacterial regulatory proteins, tetR family M1S38_06835 PF00593 TonB dependent receptor M1S38_06835 PF07715 TonB-dependent Receptor Plug Domain M1S38_06840 PF00924 Mechanosensitive ion channel M1S38_06875 PF00593 TonB dependent receptor M1S38_06875 PF07715 TonB-dependent Receptor Plug Domain M1S38_06895 PF12848 ABC transporter M1S38_06895 PF00005 ABC transporter M1S38_06900 PF00582 Universal stress protein family M1S38_06925 PF00690 Cation transporter/ATPase, N-terminus M1S38_06925 PF00689 Cation transporting ATPase, C-terminus M1S38_06930 PF02308 MgtC family M1S38_06935 PF03594 Benzoate membrane transport protein M1S38_06940 PF01037 Lrp/AsnC ligand binding domain M1S38_06945 PF01810 LysE type translocator M1S38_06950 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1S38_06955 PF03466 LysR substrate binding domain M1S38_06955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_06965 PF02803 Thiolase, C-terminal domain M1S38_06965 PF00108 Thiolase, N-terminal domain M1S38_06975 PF01575 MaoC like domain M1S38_06980 PF00144 Beta-lactamase M1S38_06990 PF07690 Major Facilitator Superfamily M1S38_06995 PF12170 DNA polymerase III tau subunit V interacting with alpha M1S38_06995 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M1S38_06995 PF12169 DNA polymerase III subunits gamma and tau domain III M1S38_07000 PF04185 Phosphoesterase family M1S38_07000 PF05506 Domain of unknown function (DUF756) M1S38_07005 PF03061 Thioesterase superfamily M1S38_07010 PF00465 Iron-containing alcohol dehydrogenase M1S38_07020 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S38_07025 PF01565 FAD binding domain M1S38_07025 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M1S38_07040 PF01645 Conserved region in glutamate synthase M1S38_07150 PF01555 DNA methylase M1S38_07340 PF03869 Arc-like DNA binding domain M1S38_07360 PF01551 Peptidase family M23 M1S38_07360 PF01464 Transglycosylase SLT domain M1S38_07360 PF10145 Phage-related minor tail protein M1S38_07430 PF12832 MFS_1 like family M1S38_07440 PF00289 Biotin carboxylase, N-terminal domain M1S38_07440 PF02785 Biotin carboxylase C-terminal domain M1S38_07440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S38_07445 PF00364 Biotin-requiring enzyme M1S38_07450 PF01220 Dehydroquinase class II M1S38_07455 PF13438 Domain of unknown function (DUF4113) M1S38_07455 PF00817 impB/mucB/samB family M1S38_07455 PF11799 impB/mucB/samB family C-terminal domain M1S38_07465 PF00005 ABC transporter M1S38_07470 PF00486 Transcriptional regulatory protein, C terminal M1S38_07470 PF00072 Response regulator receiver domain M1S38_07480 PF04324 BFD-like [2Fe-2S] binding domain M1S38_07480 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S38_07480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S38_07480 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_07480 PF13806 Rieske-like [2Fe-2S] domain M1S38_07480 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S38_07485 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S38_07485 PF04324 BFD-like [2Fe-2S] binding domain M1S38_07485 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_07485 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S38_07485 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S38_07490 PF01568 Molydopterin dinucleotide binding domain M1S38_07490 PF00384 Molybdopterin oxidoreductase M1S38_07490 PF04324 BFD-like [2Fe-2S] binding domain M1S38_07490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S38_07495 PF12804 MobA-like NTP transferase domain M1S38_07500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S38_07500 PF00384 Molybdopterin oxidoreductase M1S38_07500 PF01568 Molydopterin dinucleotide binding domain M1S38_07505 PF04055 Radical SAM superfamily M1S38_07505 PF06463 Molybdenum Cofactor Synthesis C M1S38_07515 PF02391 MoaE protein M1S38_07520 PF01967 MoaC family M1S38_07520 PF00994 Probable molybdopterin binding domain M1S38_07525 PF00994 Probable molybdopterin binding domain M1S38_07525 PF03454 MoeA C-terminal region (domain IV) M1S38_07525 PF03453 MoeA N-terminal region (domain I and II) M1S38_07530 PF01638 HxlR-like helix-turn-helix M1S38_07535 PF00392 Bacterial regulatory proteins, gntR family M1S38_07535 PF00155 Aminotransferase class I and II M1S38_07540 PF00892 EamA-like transporter family M1S38_07560 PF02635 DsrE/DsrF-like family M1S38_07565 PF16363 GDP-mannose 4,6 dehydratase M1S38_07570 PF10415 Fumarase C C-terminus M1S38_07570 PF00206 Lyase M1S38_07590 PF01266 FAD dependent oxidoreductase M1S38_07600 PF02542 YgbB family M1S38_07610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S38_07610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S38_07630 PF02954 Bacterial regulatory protein, Fis family M1S38_07630 PF00072 Response regulator receiver domain M1S38_07630 PF00158 Sigma-54 interaction domain M1S38_07635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_07635 PF00512 His Kinase A (phospho-acceptor) domain M1S38_07635 PF00989 PAS fold M1S38_07640 PF00919 Uncharacterized protein family UPF0004 M1S38_07640 PF18693 TRAM domain M1S38_07640 PF04055 Radical SAM superfamily M1S38_07645 PF00696 Amino acid kinase family M1S38_07650 PF01765 Ribosome recycling factor M1S38_07655 PF01255 Putative undecaprenyl diphosphate synthase M1S38_07665 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M1S38_07665 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M1S38_07665 PF13288 DXP reductoisomerase C-terminal domain M1S38_07670 PF02163 Peptidase family M50 M1S38_07670 PF17820 PDZ domain M1S38_07670 PF13180 PDZ domain M1S38_07675 PF07244 Surface antigen variable number repeat M1S38_07675 PF01103 Surface antigen M1S38_07685 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M1S38_07685 PF00132 Bacterial transferase hexapeptide (six repeats) M1S38_07690 PF07977 FabA-like domain M1S38_07695 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M1S38_07695 PF00132 Bacterial transferase hexapeptide (six repeats) M1S38_07710 PF02631 RecX family M1S38_07715 PF00154 recA bacterial DNA recombination protein M1S38_07720 PF01479 S4 domain M1S38_07725 PF13419 Haloacid dehalogenase-like hydrolase M1S38_07750 PF01037 Lrp/AsnC ligand binding domain M1S38_07755 PF00266 Aminotransferase class-V M1S38_07760 PF00324 Amino acid permease M1S38_07775 PF05922 Peptidase inhibitor I9 M1S38_07775 PF00082 Subtilase family M1S38_07780 PF01740 STAS domain M1S38_07780 PF00916 Sulfate permease family M1S38_07785 PF02586 SOS response associated peptidase (SRAP) M1S38_07790 PF07995 Glucose / Sorbosone dehydrogenase M1S38_07800 PF03707 Bacterial signalling protein N terminal repeat M1S38_07800 PF00990 Diguanylate cyclase, GGDEF domain M1S38_07800 PF00563 EAL domain M1S38_07820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M1S38_07820 PF02378 Phosphotransferase system, EIIC M1S38_07825 PF00294 pfkB family carbohydrate kinase M1S38_07830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M1S38_07830 PF00381 PTS HPr component phosphorylation site M1S38_07830 PF02896 PEP-utilising enzyme, TIM barrel domain M1S38_07830 PF00391 PEP-utilising enzyme, mobile domain M1S38_07830 PF05524 PEP-utilising enzyme, N-terminal M1S38_07860 PF00557 Metallopeptidase family M24 M1S38_07865 PF03466 LysR substrate binding domain M1S38_07865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_07875 PF00462 Glutaredoxin M1S38_07880 PF00202 Aminotransferase class-III M1S38_07885 PF00478 IMP dehydrogenase / GMP reductase domain M1S38_07885 PF00571 CBS domain M1S38_07910 PF02881 SRP54-type protein, helical bundle domain M1S38_07910 PF00448 SRP54-type protein, GTPase domain M1S38_07920 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M1S38_07935 PF08173 Membrane bound YbgT-like protein M1S38_07940 PF02322 Cytochrome bd terminal oxidase subunit II M1S38_07945 PF01654 Cytochrome bd terminal oxidase subunit I M1S38_07955 PF07290 Protein of unknown function (DUF1449) M1S38_07965 PF00294 pfkB family carbohydrate kinase M1S38_07970 PF07715 TonB-dependent Receptor Plug Domain M1S38_07970 PF00593 TonB dependent receptor M1S38_07975 PF08367 Peptidase M16C associated M1S38_07975 PF00675 Insulinase (Peptidase family M16) M1S38_07975 PF05193 Peptidase M16 inactive domain M1S38_07980 PF02253 Phospholipase A1 M1S38_07985 PF02386 Cation transport protein M1S38_07990 PF02080 TrkA-C domain M1S38_07990 PF02254 TrkA-N domain M1S38_07995 PF00291 Pyridoxal-phosphate dependent enzyme M1S38_07995 PF00585 C-terminal regulatory domain of Threonine dehydratase M1S38_08000 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M1S38_08015 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S38_08015 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S38_08025 PF02617 ATP-dependent Clp protease adaptor protein ClpS M1S38_08030 PF00004 ATPase family associated with various cellular activities (AAA) M1S38_08030 PF07724 AAA domain (Cdc48 subfamily) M1S38_08030 PF17871 AAA lid domain M1S38_08030 PF02861 Clp amino terminal domain, pathogenicity island component M1S38_08030 PF10431 C-terminal, D2-small domain, of ClpB protein M1S38_08035 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M1S38_08040 PF00793 DAHP synthetase I family M1S38_08055 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_08055 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S38_08085 PF00117 Glutamine amidotransferase class-I M1S38_08085 PF06418 CTP synthase N-terminus M1S38_08090 PF00793 DAHP synthetase I family M1S38_08095 PF00113 Enolase, C-terminal TIM barrel domain M1S38_08095 PF03952 Enolase, N-terminal domain M1S38_08100 PF04239 Protein of unknown function (DUF421) M1S38_08105 PF04977 Septum formation initiator M1S38_08110 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M1S38_08115 PF01144 Coenzyme A transferase M1S38_08120 PF01144 Coenzyme A transferase M1S38_08125 PF02803 Thiolase, C-terminal domain M1S38_08125 PF00108 Thiolase, N-terminal domain M1S38_08130 PF10397 Adenylosuccinate lyase C-terminus M1S38_08130 PF00206 Lyase M1S38_08135 PF00561 alpha/beta hydrolase fold M1S38_08140 PF07690 Major Facilitator Superfamily M1S38_08145 PF02627 Carboxymuconolactone decarboxylase family M1S38_08150 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M1S38_08150 PF00775 Dioxygenase M1S38_08155 PF00775 Dioxygenase M1S38_08160 PF01487 Type I 3-dehydroquinase M1S38_08165 PF05048 Periplasmic copper-binding protein (NosD) M1S38_08170 PF04966 Carbohydrate-selective porin, OprB family M1S38_08175 PF13360 PQQ-like domain M1S38_08175 PF01011 PQQ enzyme repeat M1S38_08185 PF04143 Sulphur transport M1S38_08195 PF00753 Metallo-beta-lactamase superfamily M1S38_08200 PF01614 Bacterial transcriptional regulator M1S38_08200 PF09339 IclR helix-turn-helix domain M1S38_08205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_08205 PF03466 LysR substrate binding domain M1S38_08210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_08210 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_08210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_08225 PF00106 short chain dehydrogenase M1S38_08235 PF07690 Major Facilitator Superfamily M1S38_08245 PF01425 Amidase M1S38_08250 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S38_08265 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S38_08265 PF00355 Rieske [2Fe-2S] domain M1S38_08280 PF00175 Oxidoreductase NAD-binding domain M1S38_08280 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S38_08285 PF01613 Flavin reductase like domain M1S38_08290 PF12833 Helix-turn-helix domain M1S38_08290 PF02311 AraC-like ligand binding domain M1S38_08295 PF02727 Copper amine oxidase, N2 domain M1S38_08295 PF02728 Copper amine oxidase, N3 domain M1S38_08295 PF01179 Copper amine oxidase, enzyme domain M1S38_08295 PF07833 Copper amine oxidase N-terminal domain M1S38_08310 PF01804 Penicillin amidase M1S38_08315 PF12146 Serine aminopeptidase, S33 M1S38_08320 PF02803 Thiolase, C-terminal domain M1S38_08320 PF00108 Thiolase, N-terminal domain M1S38_08325 PF01144 Coenzyme A transferase M1S38_08330 PF01144 Coenzyme A transferase M1S38_08335 PF00775 Dioxygenase M1S38_08335 PF04444 Catechol dioxygenase N terminus M1S38_08340 PF02426 Muconolactone delta-isomerase M1S38_08345 PF13378 Enolase C-terminal domain-like M1S38_08345 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S38_08350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_08350 PF03466 LysR substrate binding domain M1S38_08360 PF07729 FCD domain M1S38_08360 PF00392 Bacterial regulatory proteins, gntR family M1S38_08365 PF00920 Dehydratase family M1S38_08370 PF07690 Major Facilitator Superfamily M1S38_08400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_08400 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_08400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_08410 PF00158 Sigma-54 interaction domain M1S38_08410 PF06506 Propionate catabolism activator M1S38_08410 PF02954 Bacterial regulatory protein, Fis family M1S38_08415 PF00501 AMP-binding enzyme M1S38_08415 PF13193 AMP-binding enzyme C-terminal domain M1S38_08420 PF04341 Protein of unknown function, DUF485 M1S38_08425 PF00474 Sodium:solute symporter family M1S38_08430 PF08240 Alcohol dehydrogenase GroES-like domain M1S38_08430 PF00107 Zinc-binding dehydrogenase M1S38_08435 PF00171 Aldehyde dehydrogenase family M1S38_08445 PF00561 alpha/beta hydrolase fold M1S38_08450 PF00199 Catalase M1S38_08450 PF06628 Catalase-related immune-responsive M1S38_08465 PF07859 alpha/beta hydrolase fold M1S38_08470 PF01047 MarR family M1S38_08475 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_08475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S38_08480 PF00106 short chain dehydrogenase M1S38_08485 PF01872 RibD C-terminal domain M1S38_08490 PF00376 MerR family regulatory protein M1S38_08490 PF09278 MerR, DNA binding M1S38_08500 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_08510 PF12706 Beta-lactamase superfamily domain M1S38_08515 PF08359 YsiA-like protein, C-terminal region M1S38_08515 PF00440 Bacterial regulatory proteins, tetR family M1S38_08525 PF00857 Isochorismatase family M1S38_08530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_08530 PF03466 LysR substrate binding domain M1S38_08535 PF07995 Glucose / Sorbosone dehydrogenase M1S38_08540 PF00999 Sodium/hydrogen exchanger family M1S38_08540 PF02254 TrkA-N domain M1S38_08550 PF07687 Peptidase dimerisation domain M1S38_08550 PF01546 Peptidase family M20/M25/M40 M1S38_08560 PF08479 POTRA domain, ShlB-type M1S38_08560 PF17287 POTRA domain M1S38_08560 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M1S38_08565 PF04829 Pre-toxin domain with VENN motif M1S38_08565 PF13332 Hemagglutinin repeat M1S38_08565 PF13018 Extended Signal Peptide of Type V secretion system M1S38_08565 PF05860 haemagglutination activity domain M1S38_08580 PF07690 Major Facilitator Superfamily M1S38_08585 PF04909 Amidohydrolase M1S38_08595 PF00392 Bacterial regulatory proteins, gntR family M1S38_08595 PF07702 UTRA domain M1S38_08600 PF08450 SMP-30/Gluconolactonase/LRE-like region M1S38_08610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_08610 PF03466 LysR substrate binding domain M1S38_08630 PF07690 Major Facilitator Superfamily M1S38_08635 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S38_08635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S38_08635 PF01842 ACT domain M1S38_08640 PF03737 Aldolase/RraA M1S38_08670 PF00529 HlyD membrane-fusion protein of T1SS M1S38_08670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S38_08685 PF00171 Aldehyde dehydrogenase family M1S38_08690 PF00171 Aldehyde dehydrogenase family M1S38_08695 PF00920 Dehydratase family M1S38_08705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_08705 PF03466 LysR substrate binding domain M1S38_08710 PF01370 NAD dependent epimerase/dehydratase family M1S38_08715 PF07690 Major Facilitator Superfamily M1S38_08720 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S38_08720 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S38_08725 PF06719 AraC-type transcriptional regulator N-terminus M1S38_08725 PF12833 Helix-turn-helix domain M1S38_08740 PF08240 Alcohol dehydrogenase GroES-like domain M1S38_08740 PF00107 Zinc-binding dehydrogenase M1S38_08750 PF01032 FecCD transport family M1S38_08755 PF00005 ABC transporter M1S38_08775 PF14572 Phosphoribosyl synthetase-associated domain M1S38_08775 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S38_08780 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S38_08855 PF00196 Bacterial regulatory proteins, luxR family M1S38_08860 PF01425 Amidase M1S38_08865 PF13533 Biotin-lipoyl like M1S38_08870 PF07690 Major Facilitator Superfamily M1S38_08895 PF01975 Survival protein SurE M1S38_08905 PF02824 TGS domain M1S38_08905 PF04607 Region found in RelA / SpoT proteins M1S38_08905 PF13291 ACT domain M1S38_08955 PF12146 Serine aminopeptidase, S33 M1S38_08960 PF12833 Helix-turn-helix domain M1S38_08960 PF02311 AraC-like ligand binding domain M1S38_08975 PF16527 Two-component sensor protein CpxA, periplasmic domain M1S38_08975 PF00672 HAMP domain M1S38_08975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_08975 PF00512 His Kinase A (phospho-acceptor) domain M1S38_08980 PF00072 Response regulator receiver domain M1S38_08980 PF00486 Transcriptional regulatory protein, C terminal M1S38_08985 PF00529 HlyD membrane-fusion protein of T1SS M1S38_08985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S38_08990 PF00873 AcrB/AcrD/AcrF family M1S38_08995 PF02321 Outer membrane efflux protein M1S38_09000 PF12146 Serine aminopeptidase, S33 M1S38_09005 PF00743 Flavin-binding monooxygenase-like M1S38_09010 PF01593 Flavin containing amine oxidoreductase M1S38_09025 PF01266 FAD dependent oxidoreductase M1S38_09045 PF16970 Type-1 fimbrial protein, A M1S38_09055 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S38_09055 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S38_09060 PF13953 PapC C-terminal domain M1S38_09060 PF13954 PapC N-terminal domain M1S38_09060 PF00577 Outer membrane usher protein M1S38_09065 PF00419 Fimbrial protein M1S38_09075 PF08240 Alcohol dehydrogenase GroES-like domain M1S38_09075 PF00107 Zinc-binding dehydrogenase M1S38_09085 PF00199 Catalase M1S38_09100 PF13091 PLD-like domain M1S38_09115 PF01244 Membrane dipeptidase (Peptidase family M19) M1S38_09120 PF04055 Radical SAM superfamily M1S38_09120 PF13186 Iron-sulfur cluster-binding domain M1S38_09125 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M1S38_09130 PF03070 TENA/THI-4/PQQC family M1S38_09135 PF12706 Beta-lactamase superfamily domain M1S38_09140 PF08042 PqqA family M1S38_09145 PF13089 Polyphosphate kinase N-terminal domain M1S38_09145 PF17941 Polyphosphate kinase C-terminal domain 1 M1S38_09145 PF02503 Polyphosphate kinase middle domain M1S38_09145 PF13090 Polyphosphate kinase C-terminal domain 2 M1S38_09150 PF00149 Calcineurin-like phosphoesterase M1S38_09160 PF00857 Isochorismatase family M1S38_09160 PF00550 Phosphopantetheine attachment site M1S38_09165 PF00106 short chain dehydrogenase M1S38_09170 PF03459 TOBE domain M1S38_09170 PF00005 ABC transporter M1S38_09175 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_09185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_09185 PF03459 TOBE domain M1S38_09190 PF00355 Rieske [2Fe-2S] domain M1S38_09190 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S38_09195 PF00866 Ring hydroxylating beta subunit M1S38_09200 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S38_09200 PF00970 Oxidoreductase FAD-binding domain M1S38_09200 PF00175 Oxidoreductase NAD-binding domain M1S38_09205 PF14525 AraC-binding-like domain M1S38_09205 PF12833 Helix-turn-helix domain M1S38_09215 PF01613 Flavin reductase like domain M1S38_09230 PF01738 Dienelactone hydrolase family M1S38_09235 PF07690 Major Facilitator Superfamily M1S38_09240 PF06719 AraC-type transcriptional regulator N-terminus M1S38_09240 PF12833 Helix-turn-helix domain M1S38_09265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_09265 PF03466 LysR substrate binding domain M1S38_09270 PF01144 Coenzyme A transferase M1S38_09275 PF01144 Coenzyme A transferase M1S38_09280 PF02667 Short chain fatty acid transporter M1S38_09285 PF02803 Thiolase, C-terminal domain M1S38_09285 PF00108 Thiolase, N-terminal domain M1S38_09290 PF03466 LysR substrate binding domain M1S38_09290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_09295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_09295 PF03466 LysR substrate binding domain M1S38_09310 PF10415 Fumarase C C-terminus M1S38_09310 PF00206 Lyase M1S38_09315 PF07715 TonB-dependent Receptor Plug Domain M1S38_09315 PF00593 TonB dependent receptor M1S38_09320 PF00083 Sugar (and other) transporter M1S38_09335 PF00005 ABC transporter M1S38_09340 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_09345 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S38_09360 PF07702 UTRA domain M1S38_09360 PF00392 Bacterial regulatory proteins, gntR family M1S38_09370 PF02525 Flavodoxin-like fold M1S38_09375 PF01638 HxlR-like helix-turn-helix M1S38_09380 PF12833 Helix-turn-helix domain M1S38_09380 PF06445 GyrI-like small molecule binding domain M1S38_09395 PF01925 Sulfite exporter TauE/SafE M1S38_09410 PF00753 Metallo-beta-lactamase superfamily M1S38_09410 PF04273 Putative phosphatase (DUF442) M1S38_09415 PF02954 Bacterial regulatory protein, Fis family M1S38_09415 PF00072 Response regulator receiver domain M1S38_09415 PF00158 Sigma-54 interaction domain M1S38_09420 PF01062 Bestrophin, RFP-TM, chloride channel M1S38_09425 PF00107 Zinc-binding dehydrogenase M1S38_09425 PF08240 Alcohol dehydrogenase GroES-like domain M1S38_09430 PF00106 short chain dehydrogenase M1S38_09435 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_09435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S38_09440 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S38_09440 PF00364 Biotin-requiring enzyme M1S38_09440 PF02817 e3 binding domain M1S38_09445 PF02780 Transketolase, C-terminal domain M1S38_09445 PF02779 Transketolase, pyrimidine binding domain M1S38_09450 PF00676 Dehydrogenase E1 component M1S38_09455 PF04055 Radical SAM superfamily M1S38_09470 PF08448 PAS fold M1S38_09470 PF00990 Diguanylate cyclase, GGDEF domain M1S38_09475 PF01264 Chorismate synthase M1S38_09480 PF05175 Methyltransferase small domain M1S38_09485 PF00291 Pyridoxal-phosphate dependent enzyme M1S38_09495 PF17862 AAA+ lid domain M1S38_09495 PF00004 ATPase family associated with various cellular activities (AAA) M1S38_09495 PF01434 Peptidase family M41 M1S38_09505 PF05166 YcgL domain M1S38_09525 PF01612 3'-5' exonuclease M1S38_09525 PF00570 HRDC domain M1S38_09530 PF02132 RecR protein M1S38_09530 PF13662 Toprim domain M1S38_09535 PF02575 YbaB/EbfC DNA-binding family M1S38_09545 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S38_09550 PF00561 alpha/beta hydrolase fold M1S38_09555 PF08241 Methyltransferase domain M1S38_09585 PF01230 HIT domain M1S38_09620 PF00005 ABC transporter M1S38_09625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S38_09635 PF02684 Lipid-A-disaccharide synthetase M1S38_09640 PF07715 TonB-dependent Receptor Plug Domain M1S38_09640 PF00593 TonB dependent receptor M1S38_09660 PF01925 Sulfite exporter TauE/SafE M1S38_09665 PF00793 DAHP synthetase I family M1S38_09670 PF02654 Cobalamin-5-phosphate synthase M1S38_09685 PF02277 Phosphoribosyltransferase M1S38_09690 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M1S38_09700 PF13419 Haloacid dehalogenase-like hydrolase M1S38_09725 PF07715 TonB-dependent Receptor Plug Domain M1S38_09725 PF00593 TonB dependent receptor M1S38_09740 PF04183 IucA / IucC family M1S38_09740 PF06276 Ferric iron reductase FhuF-like transporter M1S38_09745 PF06276 Ferric iron reductase FhuF-like transporter M1S38_09745 PF04183 IucA / IucC family M1S38_09750 PF07690 Major Facilitator Superfamily M1S38_09755 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S38_09760 PF06276 Ferric iron reductase FhuF-like transporter M1S38_09760 PF04183 IucA / IucC family M1S38_09765 PF04073 Aminoacyl-tRNA editing domain M1S38_09775 PF03109 ABC1 family M1S38_09780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_09780 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_09780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_09785 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_09785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_09785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_09790 PF00487 Fatty acid desaturase M1S38_09795 PF12852 Cupin M1S38_09795 PF12833 Helix-turn-helix domain M1S38_09800 PF09312 SurA N-terminal domain M1S38_09800 PF00639 PPIC-type PPIASE domain M1S38_09805 PF00216 Bacterial DNA-binding protein M1S38_09820 PF02082 Transcriptional regulator M1S38_09825 PF00266 Aminotransferase class-V M1S38_09830 PF01592 NifU-like N terminal domain M1S38_09835 PF01521 Iron-sulphur cluster biosynthesis M1S38_09840 PF07743 HSCB C-terminal oligomerisation domain M1S38_09840 PF00226 DnaJ domain M1S38_09845 PF00012 Hsp70 protein M1S38_09850 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S38_09855 PF00211 Adenylate and Guanylate cyclase catalytic domain M1S38_09865 PF00270 DEAD/DEAH box helicase M1S38_09865 PF03461 TRCF domain M1S38_09865 PF00271 Helicase conserved C-terminal domain M1S38_09865 PF02559 CarD-like/TRCF domain M1S38_09865 PF17757 UvrB interaction domain M1S38_09895 PF03737 Aldolase/RraA M1S38_09900 PF13460 NAD(P)H-binding M1S38_09905 PF01649 Ribosomal protein S20 M1S38_09915 PF00459 Inositol monophosphatase family M1S38_09930 PF00005 ABC transporter M1S38_09930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S38_09935 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_09940 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_09945 PF01432 Peptidase family M3 M1S38_09965 PF00593 TonB dependent receptor M1S38_09965 PF07715 TonB-dependent Receptor Plug Domain M1S38_09975 PF01618 MotA/TolQ/ExbB proton channel family M1S38_09980 PF02472 Biopolymer transport protein ExbD/TolR M1S38_09985 PF02472 Biopolymer transport protein ExbD/TolR M1S38_09995 PF01274 Malate synthase M1S38_10000 PF03969 AFG1-like ATPase M1S38_10010 PF00743 Flavin-binding monooxygenase-like M1S38_10020 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M1S38_10030 PF00216 Bacterial DNA-binding protein M1S38_10035 PF00575 S1 RNA binding domain M1S38_10040 PF02224 Cytidylate kinase M1S38_10050 PF14437 MafB19-like deaminase M1S38_10060 PF03167 Uracil DNA glycosylase superfamily M1S38_10070 PF03934 Type II secretion system (T2SS), protein K M1S38_10075 PF07963 Prokaryotic N-terminal methylation motif M1S38_10075 PF11612 Type II secretion system (T2SS), protein J M1S38_10080 PF07963 Prokaryotic N-terminal methylation motif M1S38_10080 PF02501 Type II secretion system (T2SS), protein I M1S38_10105 PF09115 DNA polymerase III, delta subunit, C terminal M1S38_10110 PF02348 Cytidylyltransferase M1S38_10115 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M1S38_10120 PF00664 ABC transporter transmembrane region M1S38_10120 PF00005 ABC transporter M1S38_10130 PF01618 MotA/TolQ/ExbB proton channel family M1S38_10135 PF17762 HTH domain found in ParB protein M1S38_10135 PF02195 ParB-like nuclease domain M1S38_10140 PF13614 AAA domain M1S38_10145 PF02527 rRNA small subunit methyltransferase G M1S38_10150 PF00483 Nucleotidyl transferase M1S38_10155 PF01636 Phosphotransferase enzyme family M1S38_10160 PF04453 LPS transport system D M1S38_10160 PF03968 OstA-like protein M1S38_10165 PF09312 SurA N-terminal domain M1S38_10165 PF00639 PPIC-type PPIASE domain M1S38_10170 PF01116 Fructose-bisphosphate aldolase class-II M1S38_10180 PF00162 Phosphoglycerate kinase M1S38_10190 PF02545 Maf-like protein M1S38_10195 PF08007 Cupin superfamily protein M1S38_10210 PF00375 Sodium:dicarboxylate symporter family M1S38_10215 PF06912 Protein of unknown function (DUF1275) M1S38_10220 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M1S38_10225 PF00005 ABC transporter M1S38_10225 PF00664 ABC transporter transmembrane region M1S38_10235 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S38_10235 PF12833 Helix-turn-helix domain M1S38_10240 PF01597 Glycine cleavage H-protein M1S38_10245 PF02146 Sir2 family M1S38_10250 PF00474 Sodium:solute symporter family M1S38_10255 PF01037 Lrp/AsnC ligand binding domain M1S38_10260 PF00171 Aldehyde dehydrogenase family M1S38_10260 PF01619 Proline dehydrogenase M1S38_10260 PF14850 DNA-binding domain of Proline dehydrogenase M1S38_10260 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M1S38_10265 PF04229 GrpB protein M1S38_10270 PF05958 tRNA (Uracil-5-)-methyltransferase M1S38_10280 PF09992 Phosphodiester glycosidase M1S38_10290 PF04264 YceI-like domain M1S38_10300 PF02779 Transketolase, pyrimidine binding domain M1S38_10300 PF02780 Transketolase, C-terminal domain M1S38_10300 PF00456 Transketolase, thiamine diphosphate binding domain M1S38_10305 PF00438 S-adenosylmethionine synthetase, N-terminal domain M1S38_10305 PF02772 S-adenosylmethionine synthetase, central domain M1S38_10305 PF02773 S-adenosylmethionine synthetase, C-terminal domain M1S38_10325 PF00905 Penicillin binding protein transpeptidase domain M1S38_10340 PF02075 Crossover junction endodeoxyribonuclease RuvC M1S38_10345 PF01256 Carbohydrate kinase M1S38_10345 PF03853 YjeF-related protein N-terminus M1S38_10350 PF08331 Domain of unknown function (DUF1730) M1S38_10355 PF06968 Biotin and Thiamin Synthesis associated domain M1S38_10355 PF04055 Radical SAM superfamily M1S38_10370 PF16970 Type-1 fimbrial protein, A M1S38_10375 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S38_10375 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S38_10380 PF13954 PapC N-terminal domain M1S38_10380 PF13953 PapC C-terminal domain M1S38_10380 PF00577 Outer membrane usher protein M1S38_10400 PF00892 EamA-like transporter family M1S38_10410 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S38_10420 PF03466 LysR substrate binding domain M1S38_10420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_10440 PF00440 Bacterial regulatory proteins, tetR family M1S38_10450 PF01709 Transcriptional regulator M1S38_10455 PF01037 Lrp/AsnC ligand binding domain M1S38_10470 PF00005 ABC transporter M1S38_10475 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_10480 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_10495 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S38_10495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_10505 PF00296 Luciferase-like monooxygenase M1S38_10510 PF03180 NLPA lipoprotein M1S38_10515 PF03180 NLPA lipoprotein M1S38_10520 PF00005 ABC transporter M1S38_10520 PF09383 NIL domain M1S38_10525 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_10530 PF01926 50S ribosome-binding GTPase M1S38_10530 PF06071 Protein of unknown function (DUF933) M1S38_10555 PF03591 AzlC protein M1S38_10560 PF05437 Branched-chain amino acid transport protein (AzlD) M1S38_10570 PF02222 ATP-grasp domain M1S38_10575 PF01966 HD domain M1S38_10575 PF08335 GlnD PII-uridylyltransferase M1S38_10575 PF01909 Nucleotidyltransferase domain M1S38_10580 PF00155 Aminotransferase class I and II M1S38_10590 PF12852 Cupin M1S38_10590 PF12833 Helix-turn-helix domain M1S38_10595 PF00255 Glutathione peroxidase M1S38_10600 PF01641 SelR domain M1S38_10605 PF00155 Aminotransferase class I and II M1S38_10610 PF00375 Sodium:dicarboxylate symporter family M1S38_10615 PF00710 Asparaginase, N-terminal M1S38_10615 PF17763 Glutaminase/Asparaginase C-terminal domain M1S38_10620 PF01336 OB-fold nucleic acid binding domain M1S38_10620 PF02811 PHP domain M1S38_10620 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S38_10620 PF14579 Helix-hairpin-helix motif M1S38_10620 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S38_10630 PF00132 Bacterial transferase hexapeptide (six repeats) M1S38_10645 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_10645 PF13192 Thioredoxin domain M1S38_10660 PF03466 LysR substrate binding domain M1S38_10660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_10665 PF01758 Sodium Bile acid symporter family M1S38_10670 PF01022 Bacterial regulatory protein, arsR family M1S38_10675 PF03960 ArsC family M1S38_10685 PF13382 Adenine deaminase C-terminal domain M1S38_10685 PF01979 Amidohydrolase family M1S38_10695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_10695 PF03466 LysR substrate binding domain M1S38_10705 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S38_10710 PF01177 Asp/Glu/Hydantoin racemase M1S38_10715 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M1S38_10720 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_10725 PF00005 ABC transporter M1S38_10730 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S38_10740 PF00083 Sugar (and other) transporter M1S38_10745 PF00296 Luciferase-like monooxygenase M1S38_10750 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_10750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_10750 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S38_10765 PF01654 Cytochrome bd terminal oxidase subunit I M1S38_10770 PF02322 Cytochrome bd terminal oxidase subunit II M1S38_10780 PF00392 Bacterial regulatory proteins, gntR family M1S38_10780 PF00155 Aminotransferase class I and II M1S38_10785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_10785 PF03466 LysR substrate binding domain M1S38_10800 PF00698 Acyl transferase domain M1S38_10805 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M1S38_10815 PF01039 Carboxyl transferase domain M1S38_10820 PF06857 Malonate decarboxylase delta subunit (MdcD) M1S38_10825 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M1S38_10830 PF16957 Malonate decarboxylase, alpha subunit, transporter M1S38_10835 PF07690 Major Facilitator Superfamily M1S38_10850 PF00392 Bacterial regulatory proteins, gntR family M1S38_10850 PF00155 Aminotransferase class I and II M1S38_10855 PF04172 LrgB-like family M1S38_10860 PF03788 LrgA family M1S38_10865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_10865 PF03466 LysR substrate binding domain M1S38_10870 PF14834 Glutathione S-transferase, C-terminal domain M1S38_10870 PF02798 Glutathione S-transferase, N-terminal domain M1S38_10875 PF02798 Glutathione S-transferase, N-terminal domain M1S38_10880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_10880 PF03466 LysR substrate binding domain M1S38_10890 PF00581 Rhodanese-like domain M1S38_10895 PF00132 Bacterial transferase hexapeptide (six repeats) M1S38_10905 PF00266 Aminotransferase class-V M1S38_10915 PF01810 LysE type translocator M1S38_10920 PF03466 LysR substrate binding domain M1S38_10920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_10930 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S38_10935 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S38_10940 PF00005 ABC transporter M1S38_10945 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_10950 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_10965 PF00072 Response regulator receiver domain M1S38_10970 PF00072 Response regulator receiver domain M1S38_10970 PF09308 LuxQ, periplasmic M1S38_10970 PF00512 His Kinase A (phospho-acceptor) domain M1S38_10970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_10980 PF13404 AsnC-type helix-turn-helix domain M1S38_10980 PF01037 Lrp/AsnC ligand binding domain M1S38_10990 PF00717 Peptidase S24-like M1S38_11015 PF18011 C-terminal domain found in long catalases M1S38_11015 PF00199 Catalase M1S38_11015 PF06628 Catalase-related immune-responsive M1S38_11025 PF18146 Damage-inducible protein CinA KH domain M1S38_11025 PF00994 Probable molybdopterin binding domain M1S38_11025 PF02464 Competence-damaged protein M1S38_11060 PF03466 LysR substrate binding domain M1S38_11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_11085 PF00501 AMP-binding enzyme M1S38_11085 PF13193 AMP-binding enzyme C-terminal domain M1S38_11090 PF00440 Bacterial regulatory proteins, tetR family M1S38_11095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_11095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_11095 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_11100 PF01039 Carboxyl transferase domain M1S38_11105 PF00378 Enoyl-CoA hydratase/isomerase M1S38_11110 PF02785 Biotin carboxylase C-terminal domain M1S38_11110 PF00289 Biotin carboxylase, N-terminal domain M1S38_11110 PF00364 Biotin-requiring enzyme M1S38_11110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S38_11110 PF18140 Propionyl-coenzyme A carboxylase BT domain M1S38_11115 PF00682 HMGL-like M1S38_11120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_11120 PF03466 LysR substrate binding domain M1S38_11135 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_11135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_11135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_11135 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S38_11145 PF07690 Major Facilitator Superfamily M1S38_11155 PF01144 Coenzyme A transferase M1S38_11160 PF01144 Coenzyme A transferase M1S38_11165 PF07690 Major Facilitator Superfamily M1S38_11170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_11170 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_11170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_11175 PF00378 Enoyl-CoA hydratase/isomerase M1S38_11185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S38_11185 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S38_11185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S38_11190 PF02803 Thiolase, C-terminal domain M1S38_11190 PF00108 Thiolase, N-terminal domain M1S38_11195 PF09339 IclR helix-turn-helix domain M1S38_11200 PF07690 Major Facilitator Superfamily M1S38_11205 PF03060 Nitronate monooxygenase M1S38_11210 PF00378 Enoyl-CoA hydratase/isomerase M1S38_11215 PF09339 IclR helix-turn-helix domain M1S38_11220 PF02515 CoA-transferase family III M1S38_11225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_11225 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_11225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_11230 PF07690 Major Facilitator Superfamily M1S38_11235 PF13419 Haloacid dehalogenase-like hydrolase M1S38_11240 PF00266 Aminotransferase class-V M1S38_11245 PF01266 FAD dependent oxidoreductase M1S38_11250 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_11255 PF00005 ABC transporter M1S38_11255 PF08402 TOBE domain M1S38_11265 PF00392 Bacterial regulatory proteins, gntR family M1S38_11265 PF07702 UTRA domain M1S38_11270 PF01494 FAD binding domain M1S38_11275 PF09339 IclR helix-turn-helix domain M1S38_11275 PF01614 Bacterial transcriptional regulator M1S38_11280 PF02525 Flavodoxin-like fold M1S38_11285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_11285 PF03466 LysR substrate binding domain M1S38_11290 PF02627 Carboxymuconolactone decarboxylase family M1S38_11295 PF00171 Aldehyde dehydrogenase family M1S38_11305 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S38_11315 PF00171 Aldehyde dehydrogenase family M1S38_11320 PF00296 Luciferase-like monooxygenase M1S38_11325 PF01613 Flavin reductase like domain M1S38_11330 PF12697 Alpha/beta hydrolase family M1S38_11350 PF01292 Prokaryotic cytochrome b561 M1S38_11355 PF00199 Catalase M1S38_11390 PF03061 Thioesterase superfamily M1S38_11395 PF00132 Bacterial transferase hexapeptide (six repeats) M1S38_11400 PF07848 PaaX-like protein M1S38_11400 PF08223 PaaX-like protein C-terminal domain M1S38_11405 PF14535 AMP-binding enzyme C-terminal domain M1S38_11405 PF00501 AMP-binding enzyme M1S38_11410 PF02803 Thiolase, C-terminal domain M1S38_11410 PF00108 Thiolase, N-terminal domain M1S38_11415 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S38_11415 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S38_11415 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S38_11420 PF00378 Enoyl-CoA hydratase/isomerase M1S38_11425 PF00378 Enoyl-CoA hydratase/isomerase M1S38_11430 PF00175 Oxidoreductase NAD-binding domain M1S38_11430 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S38_11430 PF00970 Oxidoreductase FAD-binding domain M1S38_11435 PF01883 Iron-sulfur cluster assembly protein M1S38_11445 PF06243 Phenylacetic acid degradation B M1S38_11450 PF05138 Phenylacetic acid catabolic protein M1S38_11455 PF00171 Aldehyde dehydrogenase family M1S38_11455 PF01575 MaoC like domain M1S38_11460 PF03313 Serine dehydratase alpha chain M1S38_11460 PF03315 Serine dehydratase beta chain M1S38_11465 PF13520 Amino acid permease M1S38_11470 PF00171 Aldehyde dehydrogenase family M1S38_11475 PF00083 Sugar (and other) transporter M1S38_11485 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_11485 PF04324 BFD-like [2Fe-2S] binding domain M1S38_11495 PF01266 FAD dependent oxidoreductase M1S38_11500 PF05544 Proline racemase M1S38_11505 PF00392 Bacterial regulatory proteins, gntR family M1S38_11515 PF00701 Dihydrodipicolinate synthetase family M1S38_11525 PF00376 MerR family regulatory protein M1S38_11525 PF09278 MerR, DNA binding M1S38_11540 PF02677 Epoxyqueuosine reductase QueH M1S38_11555 PF07690 Major Facilitator Superfamily M1S38_11560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S38_11570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_11570 PF03466 LysR substrate binding domain M1S38_11590 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M1S38_11595 PF06812 ImpA, N-terminal, type VI secretion system M1S38_11600 PF07724 AAA domain (Cdc48 subfamily) M1S38_11600 PF17871 AAA lid domain M1S38_11600 PF10431 C-terminal, D2-small domain, of ClpB protein M1S38_11600 PF00004 ATPase family associated with various cellular activities (AAA) M1S38_11615 PF00691 OmpA family M1S38_11615 PF01389 OmpA-like transmembrane domain M1S38_11625 PF06761 Intracellular multiplication and human macrophage-killing M1S38_11625 PF14331 ImcF-related N-terminal domain M1S38_11625 PF06744 Type VI secretion protein IcmF C-terminal M1S38_11640 PF05947 Type VI secretion system, TssF M1S38_11655 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M1S38_11680 PF00005 ABC transporter M1S38_11685 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S38_11690 PF01425 Amidase M1S38_11695 PF01402 Ribbon-helix-helix protein, copG family M1S38_11695 PF08753 NikR C terminal nickel binding domain M1S38_11715 PF02525 Flavodoxin-like fold M1S38_11720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S38_11720 PF00289 Biotin carboxylase, N-terminal domain M1S38_11720 PF02785 Biotin carboxylase C-terminal domain M1S38_11735 PF00107 Zinc-binding dehydrogenase M1S38_11735 PF13823 Alcohol dehydrogenase GroES-associated M1S38_11735 PF08240 Alcohol dehydrogenase GroES-like domain M1S38_11745 PF00440 Bacterial regulatory proteins, tetR family M1S38_11765 PF00654 Voltage gated chloride channel M1S38_11770 PF00289 Biotin carboxylase, N-terminal domain M1S38_11770 PF00364 Biotin-requiring enzyme M1S38_11770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S38_11770 PF02785 Biotin carboxylase C-terminal domain M1S38_11780 PF07286 Protein of unknown function (DUF1445) M1S38_11785 PF03746 LamB/YcsF family M1S38_11790 PF01566 Natural resistance-associated macrophage protein M1S38_11795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_11795 PF03466 LysR substrate binding domain M1S38_11810 PF03527 RHS protein M1S38_11810 PF05593 RHS Repeat M1S38_11815 PF13296 Putative type VI secretion system Rhs element Vgr M1S38_11815 PF04717 Type VI secretion system, phage-baseplate injector M1S38_11815 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S38_11825 PF13419 Haloacid dehalogenase-like hydrolase M1S38_11845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S38_11845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S38_11865 PF07690 Major Facilitator Superfamily M1S38_11880 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S38_11885 PF03707 Bacterial signalling protein N terminal repeat M1S38_11885 PF00990 Diguanylate cyclase, GGDEF domain M1S38_11885 PF00563 EAL domain M1S38_11890 PF00892 EamA-like transporter family M1S38_11895 PF01037 Lrp/AsnC ligand binding domain M1S38_11900 PF05188 MutS domain II M1S38_11900 PF05192 MutS domain III M1S38_11900 PF05190 MutS family domain IV M1S38_11900 PF00488 MutS domain V M1S38_11900 PF01624 MutS domain I M1S38_11910 PF11953 Domain of unknown function (DUF3470) M1S38_11910 PF00037 4Fe-4S binding domain M1S38_11920 PF01596 O-methyltransferase M1S38_11930 PF00132 Bacterial transferase hexapeptide (six repeats) M1S38_11935 PF01205 Uncharacterized protein family UPF0029 M1S38_11945 PF00664 ABC transporter transmembrane region M1S38_11945 PF00005 ABC transporter M1S38_11945 PF03412 Peptidase C39 family M1S38_11950 PF02321 Outer membrane efflux protein M1S38_11955 PF00005 ABC transporter M1S38_11955 PF12399 Branched-chain amino acid ATP-binding cassette transporter M1S38_11960 PF03968 OstA-like protein M1S38_11975 PF00571 CBS domain M1S38_11975 PF01380 SIS domain M1S38_11980 PF09190 DALR domain M1S38_11980 PF01406 tRNA synthetases class I (C) catalytic domain M1S38_12005 PF01638 HxlR-like helix-turn-helix M1S38_12010 PF07690 Major Facilitator Superfamily M1S38_12035 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S38_12035 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S38_12045 PF00313 'Cold-shock' DNA-binding domain M1S38_12050 PF01810 LysE type translocator M1S38_12080 PF13742 OB-fold nucleic acid binding domain M1S38_12080 PF02601 Exonuclease VII, large subunit M1S38_12115 PF00376 MerR family regulatory protein M1S38_12115 PF09278 MerR, DNA binding M1S38_12120 PF00403 Heavy-metal-associated domain M1S38_12125 PF00403 Heavy-metal-associated domain M1S38_12130 PF03466 LysR substrate binding domain M1S38_12130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_12140 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S38_12140 PF00355 Rieske [2Fe-2S] domain M1S38_12145 PF00866 Ring hydroxylating beta subunit M1S38_12150 PF00970 Oxidoreductase FAD-binding domain M1S38_12150 PF00175 Oxidoreductase NAD-binding domain M1S38_12150 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S38_12155 PF00106 short chain dehydrogenase M1S38_12160 PF03594 Benzoate membrane transport protein M1S38_12165 PF07690 Major Facilitator Superfamily M1S38_12175 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M1S38_12175 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M1S38_12180 PF11898 Domain of unknown function (DUF3418) M1S38_12180 PF00271 Helicase conserved C-terminal domain M1S38_12180 PF04408 Helicase associated domain (HA2) M1S38_12180 PF00270 DEAD/DEAH box helicase M1S38_12180 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M1S38_12185 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S38_12185 PF00578 AhpC/TSA family M1S38_12215 PF00043 Glutathione S-transferase, C-terminal domain M1S38_12215 PF02798 Glutathione S-transferase, N-terminal domain M1S38_12225 PF02390 Putative methyltransferase M1S38_12230 PF00043 Glutathione S-transferase, C-terminal domain M1S38_12230 PF13417 Glutathione S-transferase, N-terminal domain M1S38_12240 PF13488 Glycine zipper M1S38_12240 PF00691 OmpA family M1S38_12245 PF01979 Amidohydrolase family M1S38_12250 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S38_12250 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S38_12260 PF10672 S-adenosylmethionine-dependent methyltransferase M1S38_12260 PF02926 THUMP domain M1S38_12260 PF01170 Putative RNA methylase family UPF0020 M1S38_12275 PF00004 ATPase family associated with various cellular activities (AAA) M1S38_12275 PF07724 AAA domain (Cdc48 subfamily) M1S38_12275 PF17871 AAA lid domain M1S38_12275 PF02861 Clp amino terminal domain, pathogenicity island component M1S38_12275 PF10431 C-terminal, D2-small domain, of ClpB protein M1S38_12290 PF02566 OsmC-like protein M1S38_12300 PF00027 Cyclic nucleotide-binding domain M1S38_12300 PF13545 Crp-like helix-turn-helix domain M1S38_12310 PF00248 Aldo/keto reductase family M1S38_12325 PF00709 Adenylosuccinate synthetase M1S38_12330 PF13393 Histidyl-tRNA synthetase M1S38_12335 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S38_12335 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S38_12340 PF02272 DHHA1 domain M1S38_12340 PF01411 tRNA synthetases class II (A) M1S38_12340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S38_12345 PF13840 ACT domain M1S38_12345 PF00696 Amino acid kinase family M1S38_12345 PF01842 ACT domain M1S38_12350 PF02599 Global regulator protein family M1S38_12355 PF01351 Ribonuclease HII M1S38_12365 PF13610 DDE domain M1S38_12370 PF00239 Resolvase, N terminal domain M1S38_12370 PF02796 Helix-turn-helix domain of resolvase M1S38_12380 PF13610 DDE domain M1S38_12390 PF00239 Resolvase, N terminal domain M1S38_12390 PF02796 Helix-turn-helix domain of resolvase M1S38_12395 PF13610 DDE domain M1S38_12405 PF04958 Arginine N-succinyltransferase beta subunit M1S38_12410 PF00202 Aminotransferase class-III M1S38_12420 PF00171 Aldehyde dehydrogenase family M1S38_12430 PF07729 FCD domain M1S38_12430 PF00392 Bacterial regulatory proteins, gntR family M1S38_12440 PF00324 Amino acid permease M1S38_12445 PF01266 FAD dependent oxidoreductase M1S38_12490 PF03527 RHS protein M1S38_12490 PF05593 RHS Repeat M1S38_12495 PF13296 Putative type VI secretion system Rhs element Vgr M1S38_12495 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S38_12495 PF04717 Type VI secretion system, phage-baseplate injector M1S38_12515 PF03180 NLPA lipoprotein M1S38_12520 PF05987 Bacterial protein of unknown function (DUF898) M1S38_12535 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_12535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S38_12540 PF00764 Arginosuccinate synthase M1S38_12545 PF01590 GAF domain M1S38_12545 PF00990 Diguanylate cyclase, GGDEF domain M1S38_12545 PF00563 EAL domain M1S38_12545 PF00360 Phytochrome region M1S38_12550 PF01979 Amidohydrolase family M1S38_12555 PF00929 Exonuclease M1S38_12565 PF00593 TonB dependent receptor M1S38_12565 PF07715 TonB-dependent Receptor Plug Domain M1S38_12570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S38_12570 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_12575 PF00005 ABC transporter M1S38_12575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S38_12580 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_12580 PF12911 N-terminal TM domain of oligopeptide transport permease C M1S38_12585 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_12590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1S38_12595 PF01476 LysM domain M1S38_12595 PF01464 Transglycosylase SLT domain M1S38_12595 PF01476 LysM domain M1S38_12595 PF01464 Transglycosylase SLT domain M1S38_12600 PF00929 Exonuclease M1S38_12610 PF00293 NUDIX domain M1S38_12610 PF09297 NADH pyrophosphatase zinc ribbon domain M1S38_12620 PF04972 BON domain M1S38_12625 PF02021 Uncharacterised protein family UPF0102 M1S38_12630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S38_12640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_12640 PF03466 LysR substrate binding domain M1S38_12645 PF01810 LysE type translocator M1S38_12655 PF13411 MerR HTH family regulatory protein M1S38_12665 PF01494 FAD binding domain M1S38_12670 PF01494 FAD binding domain M1S38_12675 PF00557 Metallopeptidase family M24 M1S38_12675 PF05195 Aminopeptidase P, N-terminal domain M1S38_12760 PF10145 Phage-related minor tail protein M1S38_12760 PF01464 Transglycosylase SLT domain M1S38_12760 PF01551 Peptidase family M23 M1S38_12820 PF04860 Phage portal protein M1S38_12920 PF03796 DnaB-like helicase C terminal domain M1S38_12920 PF00772 DnaB-like helicase N terminal domain M1S38_12935 PF00717 Peptidase S24-like M1S38_12935 PF01726 LexA DNA binding domain M1S38_12990 PF08019 Phosphoethanolamine transferase EptA/EptB M1S38_12990 PF00884 Sulfatase M1S38_13035 PF01551 Peptidase family M23 M1S38_13035 PF08525 Opacity-associated protein A N-terminal motif M1S38_13035 PF01476 LysM domain M1S38_13360 PF01812 5-formyltetrahydrofolate cyclo-ligase family M1S38_13365 PF04355 SmpA / OmlA family M1S38_13365 PF00691 OmpA family M1S38_13375 PF00872 Transposase, Mutator family M1S38_13385 PF02190 ATP-dependent protease La (LON) substrate-binding domain M1S38_13385 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S38_13385 PF00004 ATPase family associated with various cellular activities (AAA) M1S38_13390 PF02590 Predicted SPOUT methyltransferase M1S38_13395 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M1S38_13405 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S38_13405 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S38_13410 PF04060 Putative Fe-S cluster M1S38_13415 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S38_13415 PF00633 Helix-hairpin-helix motif M1S38_13415 PF10576 Iron-sulfur binding domain of endonuclease III M1S38_13425 PF05191 Adenylate kinase, active site lid M1S38_13440 PF03717 Penicillin-binding Protein dimerisation domain M1S38_13440 PF00905 Penicillin binding protein transpeptidase domain M1S38_13455 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S38_13460 PF01730 UreF M1S38_13465 PF05194 UreE urease accessory protein, C-terminal domain M1S38_13465 PF02814 UreE urease accessory protein, N-terminal domain M1S38_13470 PF01979 Amidohydrolase family M1S38_13470 PF00449 Urease alpha-subunit, N-terminal domain M1S38_13475 PF00699 Urease beta subunit M1S38_13480 PF00547 Urease, gamma subunit M1S38_13485 PF01774 UreD urease accessory protein M1S38_13500 PF00463 Isocitrate lyase family M1S38_13505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_13505 PF03466 LysR substrate binding domain M1S38_13510 PF03471 Transporter associated domain M1S38_13510 PF01595 Cyclin M transmembrane N-terminal domain M1S38_13510 PF00571 CBS domain M1S38_13515 PF03600 Citrate transporter M1S38_13530 PF00009 Elongation factor Tu GTP binding domain M1S38_13535 PF01507 Phosphoadenosine phosphosulfate reductase family M1S38_13545 PF14052 Capsule assembly protein Wzi M1S38_13550 PF01336 OB-fold nucleic acid binding domain M1S38_13550 PF00152 tRNA synthetases class II (D, K and N) M1S38_13565 PF00301 Rubredoxin M1S38_13570 PF18113 Rubredoxin binding C-terminal domain M1S38_13570 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_13575 PF00561 alpha/beta hydrolase fold M1S38_13580 PF03466 LysR substrate binding domain M1S38_13580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_13590 PF13089 Polyphosphate kinase N-terminal domain M1S38_13590 PF13090 Polyphosphate kinase C-terminal domain 2 M1S38_13590 PF17941 Polyphosphate kinase C-terminal domain 1 M1S38_13590 PF02503 Polyphosphate kinase middle domain M1S38_13595 PF00912 Transglycosylase M1S38_13600 PF01694 Rhomboid family M1S38_13610 PF00005 ABC transporter M1S38_13615 PF13472 GDSL-like Lipase/Acylhydrolase family M1S38_13620 PF00484 Carbonic anhydrase M1S38_13625 PF00561 alpha/beta hydrolase fold M1S38_13635 PF00593 TonB dependent receptor M1S38_13635 PF07715 TonB-dependent Receptor Plug Domain M1S38_13640 PF01106 NifU-like domain M1S38_13640 PF01521 Iron-sulphur cluster biosynthesis M1S38_13650 PF00884 Sulfatase M1S38_13655 PF03781 Sulfatase-modifying factor enzyme 1 M1S38_13670 PF00291 Pyridoxal-phosphate dependent enzyme M1S38_13675 PF01384 Phosphate transporter family M1S38_13680 PF02607 B12 binding domain M1S38_13680 PF02574 Homocysteine S-methyltransferase M1S38_13680 PF00809 Pterin binding enzyme M1S38_13680 PF02965 Vitamin B12 dependent methionine synthase, activation domain M1S38_13680 PF02310 B12 binding domain M1S38_13685 PF02780 Transketolase, C-terminal domain M1S38_13685 PF02779 Transketolase, pyrimidine binding domain M1S38_13690 PF00456 Transketolase, thiamine diphosphate binding domain M1S38_13695 PF07690 Major Facilitator Superfamily M1S38_13705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_13705 PF03466 LysR substrate binding domain M1S38_13715 PF01263 Aldose 1-epimerase M1S38_13720 PF07690 Major Facilitator Superfamily M1S38_13725 PF12833 Helix-turn-helix domain M1S38_13725 PF02311 AraC-like ligand binding domain M1S38_13730 PF04960 Glutaminase M1S38_13735 PF01327 Polypeptide deformylase M1S38_13740 PF07690 Major Facilitator Superfamily M1S38_13750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S38_13750 PF00205 Thiamine pyrophosphate enzyme, central domain M1S38_13750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S38_13755 PF00171 Aldehyde dehydrogenase family M1S38_13760 PF01958 Domain of unknown function DUF108 M1S38_13760 PF03447 Homoserine dehydrogenase, NAD binding domain M1S38_13770 PF12697 Alpha/beta hydrolase family M1S38_13780 PF07690 Major Facilitator Superfamily M1S38_13785 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_13785 PF14759 Reductase C-terminal M1S38_13790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S38_13800 PF00355 Rieske [2Fe-2S] domain M1S38_13810 PF00355 Rieske [2Fe-2S] domain M1S38_13815 PF01614 Bacterial transcriptional regulator M1S38_13815 PF09339 IclR helix-turn-helix domain M1S38_13830 PF00378 Enoyl-CoA hydratase/isomerase M1S38_13840 PF00535 Glycosyl transferase family 2 M1S38_13845 PF14883 Hypothetical glycosyl hydrolase family 13 M1S38_13845 PF01522 Polysaccharide deacetylase M1S38_13850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S38_13855 PF07152 YaeQ protein M1S38_13860 PF00375 Sodium:dicarboxylate symporter family M1S38_13865 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S38_13865 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S38_13875 PF03061 Thioesterase superfamily M1S38_13885 PF02028 BCCT, betaine/carnitine/choline family transporter M1S38_13890 PF02028 BCCT, betaine/carnitine/choline family transporter M1S38_13895 PF13977 BetI-type transcriptional repressor, C-terminal M1S38_13895 PF00440 Bacterial regulatory proteins, tetR family M1S38_13900 PF00171 Aldehyde dehydrogenase family M1S38_13905 PF05199 GMC oxidoreductase M1S38_13905 PF00732 GMC oxidoreductase M1S38_13910 PF06039 Malate:quinone oxidoreductase (Mqo) M1S38_13920 PF02574 Homocysteine S-methyltransferase M1S38_13925 PF13520 Amino acid permease M1S38_13950 PF01126 Heme oxygenase M1S38_13960 PF04575 Protein of unknown function (DUF560) M1S38_13970 PF07715 TonB-dependent Receptor Plug Domain M1S38_13970 PF00593 TonB dependent receptor M1S38_13980 PF08281 Sigma-70, region 4 M1S38_13980 PF04542 Sigma-70 region 2 M1S38_13985 PF03466 LysR substrate binding domain M1S38_13985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_13990 PF00701 Dihydrodipicolinate synthetase family M1S38_13995 PF00083 Sugar (and other) transporter M1S38_14015 PF01026 TatD related DNase M1S38_14030 PF07693 KAP family P-loop domain M1S38_14050 PF00436 Single-strand binding protein family M1S38_14105 PF13356 Arm DNA-binding domain M1S38_14105 PF00589 Phage integrase family M1S38_14195 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S38_14195 PF02767 DNA polymerase III beta subunit, central domain M1S38_14195 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S38_14235 PF05016 ParE toxin of type II toxin-antitoxin system, parDE M1S38_14385 PF07007 Lysozyme inhibitor LprI M1S38_14430 PF01695 IstB-like ATP binding protein M1S38_14440 PF00145 C-5 cytosine-specific DNA methylase M1S38_14485 PF01381 Helix-turn-helix M1S38_14485 PF00717 Peptidase S24-like M1S38_14520 PF00929 Exonuclease M1S38_14595 PF07690 Major Facilitator Superfamily M1S38_14600 PF13533 Biotin-lipoyl like M1S38_14605 PF03061 Thioesterase superfamily M1S38_14610 PF00490 Delta-aminolevulinic acid dehydratase M1S38_14615 PF01266 FAD dependent oxidoreductase M1S38_14620 PF08338 Domain of unknown function (DUF1731) M1S38_14620 PF01370 NAD dependent epimerase/dehydratase family M1S38_14640 PF00149 Calcineurin-like phosphoesterase M1S38_14640 PF12320 Type 5 capsule protein repressor C-terminal domain M1S38_14650 PF01168 Alanine racemase, N-terminal domain M1S38_14655 PF00437 Type II/IV secretion system protein M1S38_14660 PF00437 Type II/IV secretion system protein M1S38_14665 PF01475 Ferric uptake regulator family M1S38_14670 PF04355 SmpA / OmlA family M1S38_14675 PF03658 RnfH family Ubiquitin M1S38_14685 PF01814 Hemerythrin HHE cation binding domain M1S38_14690 PF13230 Glutamine amidotransferases class-II M1S38_14700 PF00696 Amino acid kinase family M1S38_14705 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S38_14705 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S38_14705 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S38_14705 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S38_14710 PF00692 dUTPase M1S38_14715 PF00580 UvrD/REP helicase N-terminal domain M1S38_14715 PF13361 UvrD-like helicase C-terminal domain M1S38_14720 PF00691 OmpA family M1S38_14720 PF13488 Glycine zipper M1S38_14725 PF01553 Acyltransferase M1S38_14735 PF03775 Septum formation inhibitor MinC, C-terminal domain M1S38_14740 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M1S38_14745 PF03776 Septum formation topological specificity factor MinE M1S38_14765 PF01810 LysE type translocator M1S38_14770 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M1S38_14770 PF01580 FtsK/SpoIIIE family M1S38_14770 PF09397 Ftsk gamma domain M1S38_14770 PF17854 FtsK alpha domain M1S38_14775 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S38_14780 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M1S38_14785 PF04377 Arginine-tRNA-protein transferase, C terminus M1S38_14785 PF04376 Arginine-tRNA-protein transferase, N terminus M1S38_14790 PF00583 Acetyltransferase (GNAT) family M1S38_14805 PF00009 Elongation factor Tu GTP binding domain M1S38_14805 PF03144 Elongation factor Tu domain 2 M1S38_14805 PF03143 Elongation factor Tu C-terminal domain M1S38_14810 PF14492 Elongation Factor G, domain II M1S38_14810 PF03764 Elongation factor G, domain IV M1S38_14810 PF00009 Elongation factor Tu GTP binding domain M1S38_14810 PF03144 Elongation factor Tu domain 2 M1S38_14810 PF00679 Elongation factor G C-terminus M1S38_14815 PF00177 Ribosomal protein S7p/S5e M1S38_14820 PF00164 Ribosomal protein S12/S23 M1S38_14830 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S38_14830 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S38_14835 PF03653 Uncharacterised protein family (UPF0093) M1S38_14840 PF02678 Pirin M1S38_14840 PF05726 Pirin C-terminal cupin domain M1S38_14850 PF00795 Carbon-nitrogen hydrolase M1S38_14850 PF02540 NAD synthase M1S38_14865 PF00970 Oxidoreductase FAD-binding domain M1S38_14865 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S38_14865 PF00175 Oxidoreductase NAD-binding domain M1S38_14870 PF00171 Aldehyde dehydrogenase family M1S38_14875 PF00355 Rieske [2Fe-2S] domain M1S38_14875 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S38_14880 PF07859 alpha/beta hydrolase fold M1S38_14885 PF02028 BCCT, betaine/carnitine/choline family transporter M1S38_14890 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S38_14895 PF03466 LysR substrate binding domain M1S38_14895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_14915 PF00037 4Fe-4S binding domain M1S38_14920 PF01467 Cytidylyltransferase-like M1S38_14925 PF01668 SmpB protein M1S38_14930 PF03358 NADPH-dependent FMN reductase M1S38_14935 PF02578 Multi-copper polyphenol oxidoreductase laccase M1S38_14940 PF01479 S4 domain M1S38_14940 PF00849 RNA pseudouridylate synthase M1S38_14945 PF13525 Outer membrane lipoprotein M1S38_14950 PF01807 CHC2 zinc finger M1S38_14950 PF08278 DNA primase DnaG DnaB-binding M1S38_14950 PF10410 DnaB-helicase binding domain of primase M1S38_14950 PF08275 DNA primase catalytic core, N-terminal domain M1S38_14955 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M1S38_14955 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M1S38_14955 PF01488 Shikimate / quinate 5-dehydrogenase M1S38_14965 PF03550 Outer membrane lipoprotein LolB M1S38_14970 PF00288 GHMP kinases N terminal domain M1S38_14970 PF08544 GHMP kinases C terminal M1S38_14995 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S38_14995 PF14572 Phosphoribosyl synthetase-associated domain M1S38_15000 PF01386 Ribosomal L25p family M1S38_15005 PF01195 Peptidyl-tRNA hydrolase M1S38_15010 PF02261 Aspartate decarboxylase M1S38_15025 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S38_15035 PF02581 Thiamine monophosphate synthase M1S38_15035 PF03070 TENA/THI-4/PQQC family M1S38_15035 PF08543 Phosphomethylpyrimidine kinase M1S38_15040 PF01476 LysM domain M1S38_15040 PF04972 BON domain M1S38_15045 PF00550 Phosphopantetheine attachment site M1S38_15055 PF00698 Acyl transferase domain M1S38_15060 PF01783 Ribosomal L32p protein family M1S38_15065 PF02620 Large ribosomal RNA subunit accumulation protein YceD M1S38_15070 PF04315 Elongation factor P hydroxylase M1S38_15075 PF01300 Telomere recombination M1S38_15080 PF02616 Segregation and condensation protein ScpA M1S38_15085 PF04079 Segregation and condensation complex subunit ScpB M1S38_15090 PF00849 RNA pseudouridylate synthase M1S38_15090 PF01479 S4 domain M1S38_15105 PF00155 Aminotransferase class I and II M1S38_15110 PF04055 Radical SAM superfamily M1S38_15110 PF00202 Aminotransferase class-III M1S38_15110 PF06968 Biotin and Thiamin Synthesis associated domain M1S38_15115 PF08241 Methyltransferase domain M1S38_15115 PF12697 Alpha/beta hydrolase family M1S38_15120 PF02358 Trehalose-phosphatase M1S38_15125 PF00982 Glycosyltransferase family 20 M1S38_15130 PF07690 Major Facilitator Superfamily M1S38_15135 PF00210 Ferritin-like domain M1S38_15140 PF00533 BRCA1 C Terminus (BRCT) domain M1S38_15140 PF01653 NAD-dependent DNA ligase adenylation domain M1S38_15140 PF03120 NAD-dependent DNA ligase OB-fold domain M1S38_15140 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M1S38_15140 PF12826 Helix-hairpin-helix motif M1S38_15150 PF06470 SMC proteins Flexible Hinge Domain M1S38_15150 PF02463 RecF/RecN/SMC N terminal domain M1S38_15160 PF01925 Sulfite exporter TauE/SafE M1S38_15170 PF03309 Type III pantothenate kinase M1S38_15175 PF00448 SRP54-type protein, GTPase domain M1S38_15175 PF02881 SRP54-type protein, helical bundle domain M1S38_15175 PF02978 Signal peptide binding domain M1S38_15185 PF01207 Dihydrouridine synthase (Dus) M1S38_15225 PF00692 dUTPase M1S38_15240 PF01048 Phosphorylase superfamily M1S38_15245 PF10609 NUBPL iron-transfer P-loop NTPase M1S38_15255 PF09334 tRNA synthetases class I (M) M1S38_15255 PF01588 Putative tRNA binding domain M1S38_15280 PF13533 Biotin-lipoyl like M1S38_15285 PF00291 Pyridoxal-phosphate dependent enzyme M1S38_15300 PF05552 Conserved TM helix M1S38_15315 PF00175 Oxidoreductase NAD-binding domain M1S38_15315 PF00970 Oxidoreductase FAD-binding domain M1S38_15320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_15320 PF03466 LysR substrate binding domain M1S38_15325 PF00313 'Cold-shock' DNA-binding domain M1S38_15335 PF00361 Proton-conducting membrane transporter M1S38_15340 PF00361 Proton-conducting membrane transporter M1S38_15345 PF00361 Proton-conducting membrane transporter M1S38_15345 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S38_15350 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S38_15355 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M1S38_15360 PF12838 4Fe-4S dicluster domain M1S38_15365 PF00146 NADH dehydrogenase M1S38_15370 PF00384 Molybdopterin oxidoreductase M1S38_15370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S38_15370 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M1S38_15375 PF10531 SLBB domain M1S38_15375 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M1S38_15375 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M1S38_15385 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M1S38_15385 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M1S38_15390 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M1S38_15395 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M1S38_15400 PF00990 Diguanylate cyclase, GGDEF domain M1S38_15400 PF17151 Periplasmic sensor domain M1S38_15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_15410 PF00672 HAMP domain M1S38_15410 PF00512 His Kinase A (phospho-acceptor) domain M1S38_15415 PF00072 Response regulator receiver domain M1S38_15415 PF00486 Transcriptional regulatory protein, C terminal M1S38_15425 PF03477 ATP cone domain M1S38_15425 PF02867 Ribonucleotide reductase, barrel domain M1S38_15425 PF00317 Ribonucleotide reductase, all-alpha domain M1S38_15435 PF00268 Ribonucleotide reductase, small chain M1S38_15445 PF00672 HAMP domain M1S38_15445 PF13756 Stimulus-sensing domain M1S38_15445 PF13755 Sensor N-terminal transmembrane domain M1S38_15445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_15445 PF00512 His Kinase A (phospho-acceptor) domain M1S38_15515 PF01011 PQQ enzyme repeat M1S38_15515 PF13360 PQQ-like domain M1S38_15540 PF02567 Phenazine biosynthesis-like protein M1S38_15570 PF01613 Flavin reductase like domain M1S38_15575 PF01717 Cobalamin-independent synthase, Catalytic domain M1S38_15575 PF08267 Cobalamin-independent synthase, N-terminal domain M1S38_15585 PF03466 LysR substrate binding domain M1S38_15585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_15590 PF01810 LysE type translocator M1S38_15600 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S38_15600 PF12833 Helix-turn-helix domain M1S38_15605 PF01546 Peptidase family M20/M25/M40 M1S38_15605 PF07687 Peptidase dimerisation domain M1S38_15615 PF03466 LysR substrate binding domain M1S38_15615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_15620 PF07690 Major Facilitator Superfamily M1S38_15630 PF03466 LysR substrate binding domain M1S38_15630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_15635 PF00890 FAD binding domain M1S38_15635 PF14537 Cytochrome c3 M1S38_15645 PF02515 CoA-transferase family III M1S38_15650 PF07690 Major Facilitator Superfamily M1S38_15655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_15655 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_15655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_15660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_15660 PF03466 LysR substrate binding domain M1S38_15665 PF00107 Zinc-binding dehydrogenase M1S38_15665 PF08240 Alcohol dehydrogenase GroES-like domain M1S38_15670 PF00962 Adenosine/AMP deaminase M1S38_15695 PF02445 Quinolinate synthetase A protein M1S38_15700 PF01960 ArgJ family M1S38_15705 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S38_15705 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S38_15710 PF00893 Small Multidrug Resistance protein M1S38_15720 PF05275 Copper resistance protein B precursor (CopB) M1S38_15725 PF00394 Multicopper oxidase M1S38_15725 PF07731 Multicopper oxidase M1S38_15725 PF07732 Multicopper oxidase M1S38_15740 PF00834 Ribulose-phosphate 3 epimerase family M1S38_15750 PF00756 Putative esterase M1S38_15760 PF04445 Putative SAM-dependent methyltransferase M1S38_15765 PF00814 Glycoprotease family M1S38_15770 PF00132 Bacterial transferase hexapeptide (six repeats) M1S38_15775 PF00293 NUDIX domain M1S38_15815 PF04715 Anthranilate synthase component I, N terminal region M1S38_15815 PF00425 chorismate binding enzyme M1S38_15820 PF00155 Aminotransferase class I and II M1S38_15825 PF00815 Histidinol dehydrogenase M1S38_15830 PF01634 ATP phosphoribosyltransferase M1S38_15835 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S38_15840 PF01722 BolA-like protein M1S38_15845 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M1S38_15850 PF00309 Sigma-54 factor, Activator interacting domain (AID) M1S38_15850 PF04963 Sigma-54 factor, core binding domain M1S38_15850 PF04552 Sigma-54, DNA binding domain M1S38_15895 PF00795 Carbon-nitrogen hydrolase M1S38_15905 PF01047 MarR family M1S38_15910 PF02566 OsmC-like protein M1S38_15915 PF00437 Type II/IV secretion system protein M1S38_15935 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S38_15935 PF00476 DNA polymerase family A M1S38_15935 PF01612 3'-5' exonuclease M1S38_15935 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S38_15940 PF02325 YGGT family M1S38_15945 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S38_15945 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S38_15950 PF11734 TilS substrate C-terminal domain M1S38_15950 PF09179 TilS substrate binding domain M1S38_15950 PF01171 PP-loop family M1S38_15955 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M1S38_15960 PF02541 Ppx/GppA phosphatase family M1S38_15965 PF00085 Thioredoxin M1S38_15970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S38_15970 PF07498 Rho termination factor, N-terminal domain M1S38_15970 PF07497 Rho termination factor, RNA-binding domain M1S38_15985 PF00216 Bacterial DNA-binding protein M1S38_15990 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M1S38_15990 PF03147 Ferredoxin-fold anticodon binding domain M1S38_15990 PF01588 Putative tRNA binding domain M1S38_15990 PF03483 B3/4 domain M1S38_15990 PF03484 tRNA synthetase B5 domain M1S38_15995 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M1S38_15995 PF01409 tRNA synthetases class II core domain (F) M1S38_16015 PF00453 Ribosomal protein L20 M1S38_16020 PF01632 Ribosomal protein L35 M1S38_16030 PF07690 Major Facilitator Superfamily M1S38_16035 PF09335 SNARE associated Golgi protein M1S38_16040 PF00043 Glutathione S-transferase, C-terminal domain M1S38_16040 PF02798 Glutathione S-transferase, N-terminal domain M1S38_16045 PF00707 Translation initiation factor IF-3, C-terminal domain M1S38_16045 PF05198 Translation initiation factor IF-3, N-terminal domain M1S38_16050 PF02824 TGS domain M1S38_16050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S38_16050 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S38_16050 PF03129 Anticodon binding domain M1S38_16055 PF00501 AMP-binding enzyme M1S38_16055 PF13193 AMP-binding enzyme C-terminal domain M1S38_16060 PF04751 Protein of unknown function (DUF615) M1S38_16065 PF00381 PTS HPr component phosphorylation site M1S38_16070 PF03668 P-loop ATPase protein family M1S38_16075 PF02569 Pantoate-beta-alanine ligase M1S38_16080 PF02548 Ketopantoate hydroxymethyltransferase M1S38_16085 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M1S38_16090 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S38_16090 PF12626 Polymerase A arginine-rich C-terminus M1S38_16090 PF01743 Poly A polymerase head domain M1S38_16100 PF03819 MazG nucleotide pyrophosphohydrolase domain M1S38_16110 PF02824 TGS domain M1S38_16110 PF13291 ACT domain M1S38_16110 PF04607 Region found in RelA / SpoT proteins M1S38_16115 PF05958 tRNA (Uracil-5-)-methyltransferase M1S38_16125 PF00291 Pyridoxal-phosphate dependent enzyme M1S38_16130 PF00672 HAMP domain M1S38_16130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_16130 PF00512 His Kinase A (phospho-acceptor) domain M1S38_16130 PF01627 Hpt domain M1S38_16130 PF00072 Response regulator receiver domain M1S38_16130 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M1S38_16135 PF00378 Enoyl-CoA hydratase/isomerase M1S38_16140 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S38_16140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S38_16145 PF01261 Xylose isomerase-like TIM barrel M1S38_16155 PF00106 short chain dehydrogenase M1S38_16160 PF02233 NAD(P) transhydrogenase beta subunit M1S38_16165 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M1S38_16170 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M1S38_16170 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M1S38_16175 PF00892 EamA-like transporter family M1S38_16185 PF07690 Major Facilitator Superfamily M1S38_16190 PF01207 Dihydrouridine synthase (Dus) M1S38_16200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_16200 PF03466 LysR substrate binding domain M1S38_16210 PF00899 ThiF family M1S38_16220 PF00330 Aconitase family (aconitate hydratase) M1S38_16220 PF00694 Aconitase C-terminal domain M1S38_16225 PF01026 TatD related DNase M1S38_16240 PF16658 Class II release factor RF3, C-terminal domain M1S38_16240 PF00009 Elongation factor Tu GTP binding domain M1S38_16240 PF03144 Elongation factor Tu domain 2 M1S38_16260 PF03707 Bacterial signalling protein N terminal repeat M1S38_16260 PF00563 EAL domain M1S38_16260 PF00990 Diguanylate cyclase, GGDEF domain M1S38_16265 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M1S38_16265 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M1S38_16270 PF10369 Small subunit of acetolactate synthase M1S38_16275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S38_16275 PF00205 Thiamine pyrophosphate enzyme, central domain M1S38_16275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S38_16285 PF08264 Anticodon-binding domain of tRNA M1S38_16285 PF09334 tRNA synthetases class I (M) M1S38_16285 PF00133 tRNA synthetases class I (I, L, M and V) M1S38_16285 PF13603 Leucyl-tRNA synthetase, Domain 2 M1S38_16300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S38_16305 PF12704 MacB-like periplasmic core domain M1S38_16305 PF02687 FtsX-like permease family M1S38_16305 PF00005 ABC transporter M1S38_16310 PF02321 Outer membrane efflux protein M1S38_16325 PF00929 Exonuclease M1S38_16330 PF03193 RsgA GTPase M1S38_16340 PF00462 Glutaredoxin M1S38_16345 PF02556 Preprotein translocase subunit SecB M1S38_16360 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S38_16360 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S38_16375 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S38_16375 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S38_16385 PF04820 Tryptophan halogenase M1S38_16405 PF00221 Aromatic amino acid lyase M1S38_16420 PF13193 AMP-binding enzyme C-terminal domain M1S38_16420 PF00501 AMP-binding enzyme M1S38_16430 PF00550 Phosphopantetheine attachment site M1S38_16435 PF00550 Phosphopantetheine attachment site M1S38_16450 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M1S38_16450 PF01926 50S ribosome-binding GTPase M1S38_16455 PF13360 PQQ-like domain M1S38_16465 PF03129 Anticodon binding domain M1S38_16465 PF13393 Histidyl-tRNA synthetase M1S38_16470 PF04551 GcpE protein M1S38_16475 PF13464 Domain of unknown function (DUF4115) M1S38_16485 PF04055 Radical SAM superfamily M1S38_16490 PF00334 Nucleoside diphosphate kinase M1S38_16495 PF04384 Iron-sulphur cluster assembly M1S38_16500 PF01569 PAP2 superfamily M1S38_16505 PF13439 Glycosyltransferase Family 4 M1S38_16505 PF00534 Glycosyl transferases group 1 M1S38_16510 PF17804 Tail specific protease N-terminal domain M1S38_16510 PF03572 Peptidase family S41 M1S38_16510 PF00595 PDZ domain M1S38_16510 PF11818 C-terminal domain of tail specific protease (DUF3340) M1S38_16515 PF00933 Glycosyl hydrolase family 3 N terminal domain M1S38_16525 PF00561 alpha/beta hydrolase fold M1S38_16530 PF00171 Aldehyde dehydrogenase family M1S38_16535 PF00171 Aldehyde dehydrogenase family M1S38_16540 PF01202 Shikimate kinase M1S38_16545 PF02447 GntP family permease M1S38_16550 PF01081 KDPG and KHG aldolase M1S38_16555 PF00920 Dehydratase family M1S38_16560 PF00871 Acetokinase family M1S38_16565 PF07085 DRTGG domain M1S38_16565 PF01515 Phosphate acetyl/butaryl transferase M1S38_16570 PF05683 Fumarase C-terminus M1S38_16570 PF05681 Fumarate hydratase (Fumerase) M1S38_16585 PF07724 AAA domain (Cdc48 subfamily) M1S38_16585 PF10431 C-terminal, D2-small domain, of ClpB protein M1S38_16585 PF06689 ClpX C4-type zinc finger M1S38_16590 PF00574 Clp protease M1S38_16595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S38_16595 PF05698 Bacterial trigger factor protein (TF) C-terminus M1S38_16595 PF05697 Bacterial trigger factor protein (TF) M1S38_16600 PF07715 TonB-dependent Receptor Plug Domain M1S38_16600 PF00593 TonB dependent receptor M1S38_16605 PF13640 2OG-Fe(II) oxygenase superfamily M1S38_16605 PF18331 PKHD-type hydroxylase C-terminal domain M1S38_16610 PF00682 HMGL-like M1S38_16610 PF08502 LeuA allosteric (dimerisation) domain M1S38_16615 PF00561 alpha/beta hydrolase fold M1S38_16620 PF07021 Methionine biosynthesis protein MetW M1S38_16620 PF00561 alpha/beta hydrolase fold M1S38_16630 PF01725 Ham1 family M1S38_16640 PF02416 mttA/Hcf106 family M1S38_16645 PF02416 mttA/Hcf106 family M1S38_16650 PF00902 Sec-independent protein translocase protein (TatC) M1S38_16670 PF01790 Prolipoprotein diacylglyceryl transferase M1S38_16685 PF00303 Thymidylate synthase M1S38_16690 PF00186 Dihydrofolate reductase M1S38_16700 PF01625 Peptide methionine sulfoxide reductase M1S38_16710 PF01618 MotA/TolQ/ExbB proton channel family M1S38_16720 PF01842 ACT domain M1S38_16720 PF00551 Formyl transferase M1S38_16730 PF00171 Aldehyde dehydrogenase family M1S38_16735 PF00830 Ribosomal L28 family M1S38_16740 PF00471 Ribosomal protein L33 M1S38_16745 PF02254 TrkA-N domain M1S38_16745 PF00999 Sodium/hydrogen exchanger family M1S38_16765 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) M1S38_16770 PF00580 UvrD/REP helicase N-terminal domain M1S38_16770 PF13361 UvrD-like helicase C-terminal domain M1S38_16785 PF08272 Topoisomerase I zinc-ribbon-like M1S38_16785 PF01131 DNA topoisomerase M1S38_16785 PF01751 Toprim domain M1S38_16785 PF01396 Topoisomerase DNA binding C4 zinc finger M1S38_16795 PF01638 HxlR-like helix-turn-helix M1S38_16800 PF00107 Zinc-binding dehydrogenase M1S38_16800 PF08240 Alcohol dehydrogenase GroES-like domain M1S38_16805 PF04102 SlyX M1S38_16810 PF00005 ABC transporter M1S38_16810 PF16326 ABC transporter C-terminal domain M1S38_16810 PF12848 ABC transporter M1S38_16815 PF01810 LysE type translocator M1S38_16820 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S38_16830 PF00375 Sodium:dicarboxylate symporter family M1S38_16840 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S38_16840 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S38_16860 PF01416 tRNA pseudouridine synthase M1S38_16870 PF01176 Translation initiation factor 1A / IF-1 M1S38_16885 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S38_16895 PF00694 Aconitase C-terminal domain M1S38_16900 PF00330 Aconitase family (aconitate hydratase) M1S38_16910 PF03466 LysR substrate binding domain M1S38_16910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_16930 PF00293 NUDIX domain M1S38_16935 PF01590 GAF domain M1S38_16935 PF05524 PEP-utilising enzyme, N-terminal M1S38_16935 PF00391 PEP-utilising enzyme, mobile domain M1S38_16935 PF02896 PEP-utilising enzyme, TIM barrel domain M1S38_16940 PF00141 Peroxidase M1S38_16945 PF12706 Beta-lactamase superfamily domain M1S38_16950 PF03466 LysR substrate binding domain M1S38_16950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_16960 PF02798 Glutathione S-transferase, N-terminal domain M1S38_16965 PF08279 HTH domain M1S38_16965 PF13280 WYL domain M1S38_16970 PF13419 Haloacid dehalogenase-like hydrolase M1S38_16975 PF00849 RNA pseudouridylate synthase M1S38_16975 PF01479 S4 domain M1S38_16980 PF12111 Polyribonucleotide phosphorylase C terminal M1S38_16980 PF10150 Ribonuclease E/G family M1S38_16980 PF00575 S1 RNA binding domain M1S38_16985 PF00501 AMP-binding enzyme M1S38_16985 PF13193 AMP-binding enzyme C-terminal domain M1S38_17000 PF03466 LysR substrate binding domain M1S38_17000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_17005 PF00106 short chain dehydrogenase M1S38_17010 PF06969 HemN C-terminal domain M1S38_17010 PF04055 Radical SAM superfamily M1S38_17020 PF01554 MatE M1S38_17025 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S38_17025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_17025 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_17030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_17030 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S38_17035 PF03109 ABC1 family M1S38_17040 PF01197 Ribosomal protein L31 M1S38_17055 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1S38_17075 PF03884 DNA gyrase inhibitor YacG M1S38_17080 PF00753 Metallo-beta-lactamase superfamily M1S38_17085 PF00762 Ferrochelatase M1S38_17095 PF01177 Asp/Glu/Hydantoin racemase M1S38_17110 PF01206 Sulfurtransferase TusA M1S38_17115 PF03471 Transporter associated domain M1S38_17115 PF00571 CBS domain M1S38_17120 PF00795 Carbon-nitrogen hydrolase M1S38_17125 PF01588 Putative tRNA binding domain M1S38_17135 PF07963 Prokaryotic N-terminal methylation motif M1S38_17135 PF08334 Type II secretion system (T2SS), protein G M1S38_17140 PF00482 Type II secretion system (T2SS), protein F M1S38_17145 PF00271 Helicase conserved C-terminal domain M1S38_17145 PF00270 DEAD/DEAH box helicase M1S38_17145 PF17764 3′ DNA-binding domain (3′BD) M1S38_17145 PF18074 Primosomal protein N C-terminal domain M1S38_17145 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M1S38_17155 PF00999 Sodium/hydrogen exchanger family M1S38_17155 PF02254 TrkA-N domain M1S38_17160 PF01430 Hsp33 protein M1S38_17170 PF00226 DnaJ domain M1S38_17170 PF01556 DnaJ C terminal domain M1S38_17180 PF01544 CorA-like Mg2+ transporter protein M1S38_17185 PF00013 KH domain M1S38_17185 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M1S38_17185 PF01138 3' exoribonuclease family, domain 1 M1S38_17185 PF03725 3' exoribonuclease family, domain 2 M1S38_17185 PF00575 S1 RNA binding domain M1S38_17190 PF00312 Ribosomal protein S15 M1S38_17195 PF00144 Beta-lactamase M1S38_17200 PF13538 UvrD-like helicase C-terminal domain M1S38_17205 PF12705 PD-(D/E)XK nuclease superfamily M1S38_17205 PF00580 UvrD/REP helicase N-terminal domain M1S38_17205 PF13361 UvrD-like helicase C-terminal domain M1S38_17210 PF17946 RecC C-terminal domain M1S38_17220 PF03976 Polyphosphate kinase 2 (PPK2) M1S38_17230 PF01209 ubiE/COQ5 methyltransferase family M1S38_17240 PF03109 ABC1 family M1S38_17245 PF01494 FAD binding domain M1S38_17250 PF01502 Phosphoribosyl-AMP cyclohydrolase M1S38_17265 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S38_17265 PF00361 Proton-conducting membrane transporter M1S38_17265 PF13244 Domain of unknown function (DUF4040) M1S38_17265 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M1S38_17270 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S38_17275 PF00361 Proton-conducting membrane transporter M1S38_17280 PF01899 Na+/H+ ion antiporter subunit M1S38_17285 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M1S38_17290 PF03334 Na+/H+ antiporter subunit M1S38_17295 PF02033 Ribosome-binding factor A M1S38_17300 PF04760 Translation initiation factor IF-2, N-terminal region M1S38_17300 PF11987 Translation-initiation factor 2 M1S38_17300 PF08364 Bacterial translation initiation factor IF-2 associated region M1S38_17300 PF00009 Elongation factor Tu GTP binding domain M1S38_17305 PF13184 NusA-like KH domain M1S38_17305 PF08529 NusA N-terminal domain M1S38_17305 PF00575 S1 RNA binding domain M1S38_17310 PF02576 RimP N-terminal domain M1S38_17310 PF17384 RimP C-terminal SH3 domain M1S38_17330 PF03840 Preprotein translocase SecG subunit M1S38_17335 PF00121 Triosephosphate isomerase M1S38_17340 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S38_17340 PF00437 Type II/IV secretion system protein M1S38_17345 PF00482 Type II secretion system (T2SS), protein F M1S38_17355 PF06750 Bacterial Peptidase A24 N-terminal domain M1S38_17355 PF01478 Type IV leader peptidase family M1S38_17360 PF01121 Dephospho-CoA kinase M1S38_17370 PF00588 SpoU rRNA Methylase family M1S38_17370 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S38_17375 PF06865 Pyrimidine/purine nucleoside phosphorylase M1S38_17385 PF02463 RecF/RecN/SMC N terminal domain M1S38_17390 PF02622 Uncharacterized ACR, COG1678 M1S38_17395 PF03652 Holliday junction resolvase M1S38_17400 PF13533 Biotin-lipoyl like M1S38_17425 PF02805 Metal binding domain of Ada M1S38_17425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S38_17425 PF12833 Helix-turn-helix domain M1S38_17425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S38_17430 PF01066 CDP-alcohol phosphatidyltransferase M1S38_17440 PF08459 UvrC Helix-hairpin-helix N-terminal M1S38_17440 PF02151 UvrB/uvrC motif M1S38_17440 PF01541 GIY-YIG catalytic domain M1S38_17460 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S38_17460 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S38_17460 PF00378 Enoyl-CoA hydratase/isomerase M1S38_17465 PF02803 Thiolase, C-terminal domain M1S38_17465 PF00108 Thiolase, N-terminal domain M1S38_17485 PF00376 MerR family regulatory protein M1S38_17485 PF09278 MerR, DNA binding M1S38_17495 PF01323 DSBA-like thioredoxin domain M1S38_17510 PF00183 Hsp90 protein M1S38_17510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_17525 PF13726 Na+-H+ antiporter family M1S38_17525 PF03553 Na+/H+ antiporter family M1S38_17530 PF00561 alpha/beta hydrolase fold M1S38_17550 PF04997 RNA polymerase Rpb1, domain 1 M1S38_17550 PF00623 RNA polymerase Rpb1, domain 2 M1S38_17550 PF04983 RNA polymerase Rpb1, domain 3 M1S38_17550 PF05000 RNA polymerase Rpb1, domain 4 M1S38_17550 PF04998 RNA polymerase Rpb1, domain 5 M1S38_17555 PF10385 RNA polymerase beta subunit external 1 domain M1S38_17555 PF04563 RNA polymerase beta subunit M1S38_17555 PF04561 RNA polymerase Rpb2, domain 2 M1S38_17555 PF00562 RNA polymerase Rpb2, domain 6 M1S38_17555 PF04560 RNA polymerase Rpb2, domain 7 M1S38_17555 PF04565 RNA polymerase Rpb2, domain 3 M1S38_17560 PF00542 Ribosomal protein L7/L12 C-terminal domain M1S38_17560 PF16320 Ribosomal protein L7/L12 dimerisation domain M1S38_17565 PF00466 Ribosomal protein L10 M1S38_17570 PF00687 Ribosomal protein L1p/L10e family M1S38_17575 PF00298 Ribosomal protein L11, RNA binding domain M1S38_17575 PF03946 Ribosomal protein L11, N-terminal domain M1S38_17580 PF00467 KOW motif M1S38_17580 PF02357 Transcription termination factor nusG M1S38_17585 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M1S38_17595 PF00009 Elongation factor Tu GTP binding domain M1S38_17595 PF03143 Elongation factor Tu C-terminal domain M1S38_17595 PF03144 Elongation factor Tu domain 2 M1S38_17620 PF04715 Anthranilate synthase component I, N terminal region M1S38_17620 PF00425 chorismate binding enzyme M1S38_17625 PF13419 Haloacid dehalogenase-like hydrolase M1S38_17630 PF12401 Protein of unknown function (DUF2662) M1S38_17630 PF00498 FHA domain M1S38_17635 PF00263 Bacterial type II and III secretion system protein M1S38_17635 PF03958 Bacterial type II/III secretion system short domain M1S38_17650 PF00816 H-NS histone family M1S38_17675 PF03900 Porphobilinogen deaminase, C-terminal domain M1S38_17675 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M1S38_17680 PF00072 Response regulator receiver domain M1S38_17680 PF04397 LytTr DNA-binding domain M1S38_17685 PF06580 Histidine kinase M1S38_17685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_17685 PF07694 5TMR of 5TMR-LYT M1S38_17690 PF00206 Lyase M1S38_17690 PF14698 Argininosuccinate lyase C-terminal M1S38_17695 PF04362 Bacterial Fe(2+) trafficking M1S38_17700 PF01895 PhoU domain M1S38_17705 PF02321 Outer membrane efflux protein M1S38_17710 PF00892 EamA-like transporter family M1S38_17725 PF01964 Radical SAM ThiC family M1S38_17725 PF13667 ThiC-associated domain M1S38_17730 PF00293 NUDIX domain M1S38_17735 PF00149 Calcineurin-like phosphoesterase M1S38_17740 PF01258 Prokaryotic dksA/traR C4-type zinc finger M1S38_17745 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S38_17750 PF01098 Cell cycle protein M1S38_17755 PF02875 Mur ligase family, glutamate ligase domain M1S38_17755 PF08245 Mur ligase middle domain M1S38_17765 PF07664 Ferrous iron transport protein B C terminus M1S38_17765 PF02421 Ferrous iron transport protein B M1S38_17765 PF07670 Nucleoside recognition M1S38_17775 PF02899 Phage integrase, N-terminal SAM-like domain M1S38_17775 PF00589 Phage integrase family M1S38_17780 PF13098 Thioredoxin-like domain M1S38_17780 PF10411 Disulfide bond isomerase protein N-terminus M1S38_17785 PF01842 ACT domain M1S38_17785 PF00742 Homoserine dehydrogenase M1S38_17785 PF03447 Homoserine dehydrogenase, NAD binding domain M1S38_17790 PF00291 Pyridoxal-phosphate dependent enzyme M1S38_17795 PF00768 D-alanyl-D-alanine carboxypeptidase M1S38_17800 PF00196 Bacterial regulatory proteins, luxR family M1S38_17800 PF00072 Response regulator receiver domain M1S38_17805 PF00512 His Kinase A (phospho-acceptor) domain M1S38_17805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S38_17810 PF00072 Response regulator receiver domain M1S38_17810 PF02954 Bacterial regulatory protein, Fis family M1S38_17810 PF00158 Sigma-54 interaction domain M1S38_17815 PF00595 PDZ domain M1S38_17815 PF03572 Peptidase family S41 M1S38_17820 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M1S38_17820 PF01676 Metalloenzyme superfamily M1S38_17825 PF03739 Lipopolysaccharide export system permease LptF/LptG M1S38_17835 PF00883 Cytosol aminopeptidase family, catalytic domain M1S38_17835 PF02789 Cytosol aminopeptidase family, N-terminal domain M1S38_17855 PF00677 Lumazine binding domain M1S38_17865 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S38_17865 PF01872 RibD C-terminal domain M1S38_17870 PF03477 ATP cone domain M1S38_17875 PF00909 Ammonium Transporter Family M1S38_17880 PF00543 Nitrogen regulatory protein P-II M1S38_17900 PF01636 Phosphotransferase enzyme family M1S38_17905 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M1S38_17925 PF02909 Tetracyclin repressor-like, C-terminal domain M1S38_17925 PF00440 Bacterial regulatory proteins, tetR family M1S38_17930 PF07690 Major Facilitator Superfamily M1S38_17940 PF01740 STAS domain M1S38_17940 PF00916 Sulfate permease family M1S38_17945 PF00582 Universal stress protein family M1S38_17965 PF00665 Integrase core domain M1S38_17980 PF00155 Aminotransferase class I and II M1S38_17980 PF00392 Bacterial regulatory proteins, gntR family M1S38_17990 PF00701 Dihydrodipicolinate synthetase family M1S38_18005 PF03573 outer membrane porin, OprD family M1S38_18010 PF00719 Inorganic pyrophosphatase M1S38_18025 PF00501 AMP-binding enzyme M1S38_18025 PF13193 AMP-binding enzyme C-terminal domain M1S38_18030 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S38_18030 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S38_18035 PF07690 Major Facilitator Superfamily M1S38_18040 PF03458 UPF0126 domain M1S38_18045 PF02810 SEC-C motif M1S38_18050 PF03471 Transporter associated domain M1S38_18050 PF03741 Integral membrane protein TerC family M1S38_18055 PF03641 Possible lysine decarboxylase M1S38_18060 PF07690 Major Facilitator Superfamily M1S38_18070 PF11798 IMS family HHH motif M1S38_18070 PF11799 impB/mucB/samB family C-terminal domain M1S38_18070 PF00817 impB/mucB/samB family M1S38_18090 PF08497 Radical SAM N-terminal M1S38_18090 PF04055 Radical SAM superfamily M1S38_18090 PF11842 Domain of unknown function (DUF3362) M1S38_18110 PF03358 NADPH-dependent FMN reductase M1S38_18120 PF00291 Pyridoxal-phosphate dependent enzyme M1S38_18180 PF01327 Polypeptide deformylase M1S38_18190 PF17782 DprA winged helix domain M1S38_18190 PF02481 DNA recombination-mediator protein A M1S38_18195 PF01300 Telomere recombination M1S38_18200 PF00892 EamA-like transporter family M1S38_18205 PF00440 Bacterial regulatory proteins, tetR family M1S38_18210 PF07690 Major Facilitator Superfamily M1S38_18220 PF00255 Glutathione peroxidase M1S38_18230 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M1S38_18235 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S38_18235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S38_18240 PF00231 ATP synthase M1S38_18245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S38_18245 PF00306 ATP synthase alpha/beta chain, C terminal domain M1S38_18245 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S38_18250 PF00213 ATP synthase delta (OSCP) subunit M1S38_18255 PF00430 ATP synthase B/B' CF(0) M1S38_18260 PF00137 ATP synthase subunit C M1S38_18265 PF00119 ATP synthase A chain M1S38_18285 PF00005 ABC transporter M1S38_18290 PF00950 ABC 3 transport family M1S38_18295 PF01810 LysE type translocator M1S38_18300 PF04261 Dyp-type peroxidase family M1S38_18310 PF03949 Malic enzyme, NAD binding domain M1S38_18310 PF00390 Malic enzyme, N-terminal domain M1S38_18315 PF03485 Arginyl tRNA synthetase N terminal domain M1S38_18315 PF05746 DALR anticodon binding domain M1S38_18315 PF00750 tRNA synthetases class I (R) M1S38_18335 PF02678 Pirin M1S38_18335 PF05726 Pirin C-terminal cupin domain M1S38_18345 PF03551 Transcriptional regulator PadR-like family M1S38_18350 PF13427 Domain of unknown function (DUF4111) M1S38_18350 PF01909 Nucleotidyltransferase domain M1S38_18355 PF00117 Glutamine amidotransferase class-I M1S38_18355 PF00958 GMP synthase C terminal domain M1S38_18355 PF02540 NAD synthase M1S38_18360 PF04286 Protein of unknown function (DUF445) M1S38_18365 PF07681 DoxX M1S38_18370 PF09335 SNARE associated Golgi protein M1S38_18385 PF13614 AAA domain M1S38_18395 PF01722 BolA-like protein M1S38_18410 PF01648 4'-phosphopantetheinyl transferase superfamily M1S38_18415 PF12697 Alpha/beta hydrolase family M1S38_18435 PF16197 Ketoacyl-synthetase C-terminal extension M1S38_18435 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S38_18435 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S38_18435 PF08242 Methyltransferase domain M1S38_18435 PF00550 Phosphopantetheine attachment site M1S38_18435 PF14765 Polyketide synthase dehydratase M1S38_18435 PF00975 Thioesterase domain M1S38_18440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_18440 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_18440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_18445 PF00501 AMP-binding enzyme M1S38_18450 PF03472 Autoinducer binding domain M1S38_18450 PF00196 Bacterial regulatory proteins, luxR family M1S38_18460 PF00765 Autoinducer synthase M1S38_18465 PF00083 Sugar (and other) transporter M1S38_18465 PF07690 Major Facilitator Superfamily M1S38_18470 PF00378 Enoyl-CoA hydratase/isomerase M1S38_18475 PF00378 Enoyl-CoA hydratase/isomerase M1S38_18480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S38_18480 PF02770 Acyl-CoA dehydrogenase, middle domain M1S38_18480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S38_18485 PF13193 AMP-binding enzyme C-terminal domain M1S38_18485 PF00501 AMP-binding enzyme M1S38_18490 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S38_18490 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S38_18495 PF00171 Aldehyde dehydrogenase family M1S38_18505 PF00324 Amino acid permease M1S38_18510 PF00324 Amino acid permease M1S38_18515 PF01042 Endoribonuclease L-PSP M1S38_18520 PF00842 Alanine racemase, C-terminal domain M1S38_18520 PF01168 Alanine racemase, N-terminal domain M1S38_18525 PF01266 FAD dependent oxidoreductase M1S38_18530 PF01037 Lrp/AsnC ligand binding domain M1S38_18540 PF00593 TonB dependent receptor M1S38_18540 PF07715 TonB-dependent Receptor Plug Domain M1S38_18555 PF00849 RNA pseudouridylate synthase M1S38_18570 PF00440 Bacterial regulatory proteins, tetR family M1S38_18570 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S38_18580 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S38_18580 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S38_18615 PF00694 Aconitase C-terminal domain M1S38_18615 PF00330 Aconitase family (aconitate hydratase) M1S38_18620 PF00285 Citrate synthase, C-terminal domain M1S38_18630 PF00392 Bacterial regulatory proteins, gntR family M1S38_18630 PF07729 FCD domain M1S38_18640 PF00155 Aminotransferase class I and II M1S38_18645 PF01565 FAD binding domain M1S38_18645 PF09330 D-lactate dehydrogenase, membrane binding M1S38_18650 PF01070 FMN-dependent dehydrogenase M1S38_18655 PF07729 FCD domain M1S38_18655 PF00392 Bacterial regulatory proteins, gntR family M1S38_18660 PF02652 L-lactate permease M1S38_18665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S38_18665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S38_18665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S38_18665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S38_18670 PF16363 GDP-mannose 4,6 dehydratase M1S38_18675 PF00342 Phosphoglucose isomerase M1S38_18680 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S38_18680 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S38_18680 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S38_18685 PF00483 Nucleotidyl transferase M1S38_18690 PF02397 Bacterial sugar transferase M1S38_18695 PF00535 Glycosyl transferase family 2 M1S38_18725 PF03102 NeuB family M1S38_18725 PF08666 SAF domain M1S38_18740 PF02348 Cytidylyltransferase M1S38_18745 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M1S38_18755 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S38_18755 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S38_18755 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S38_18760 PF18412 Outer-membrane lipoprotein Wza C-terminal domain M1S38_18760 PF10531 SLBB domain M1S38_18760 PF02563 Polysaccharide biosynthesis/export protein M1S38_18765 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S38_18770 PF13614 AAA domain M1S38_18770 PF13807 G-rich domain on putative tyrosine kinase M1S38_18770 PF02706 Chain length determinant protein M1S38_18775 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S38_18775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S38_18780 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S38_18780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S38_18785 PF03023 Lipid II flippase MurJ M1S38_18790 PF01510 N-acetylmuramoyl-L-alanine amidase M1S38_18795 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M1S38_18795 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M1S38_18805 PF04185 Phosphoesterase family M1S38_18805 PF05506 Domain of unknown function (DUF756) M1S38_18815 PF03725 3' exoribonuclease family, domain 2 M1S38_18815 PF01138 3' exoribonuclease family, domain 1 M1S38_18820 PF00487 Fatty acid desaturase M1S38_18825 PF00175 Oxidoreductase NAD-binding domain M1S38_18830 PF00440 Bacterial regulatory proteins, tetR family M1S38_18835 PF08360 QacR-like protein, C-terminal region M1S38_18835 PF00440 Bacterial regulatory proteins, tetR family M1S38_18840 PF01323 DSBA-like thioredoxin domain M1S38_18850 PF13419 Haloacid dehalogenase-like hydrolase M1S38_18855 PF00106 short chain dehydrogenase M1S38_18870 PF00696 Amino acid kinase family M1S38_18870 PF00583 Acetyltransferase (GNAT) family M1S38_18875 PF09084 NMT1/THI5 like M1S38_18880 PF09084 NMT1/THI5 like M1S38_18885 PF00296 Luciferase-like monooxygenase M1S38_18890 PF00528 Binding-protein-dependent transport system inner membrane component M1S38_18895 PF00005 ABC transporter M1S38_18900 PF00440 Bacterial regulatory proteins, tetR family M1S38_18900 PF08362 YcdC-like protein, C-terminal region M1S38_18905 PF01048 Phosphorylase superfamily M1S38_18915 PF01687 Riboflavin kinase M1S38_18915 PF06574 FAD synthetase M1S38_18920 PF08264 Anticodon-binding domain of tRNA M1S38_18920 PF06827 Zinc finger found in FPG and IleRS M1S38_18920 PF00133 tRNA synthetases class I (I, L, M and V) M1S38_18925 PF01252 Signal peptidase (SPase) II M1S38_18930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S38_18970 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S38_18975 PF07859 alpha/beta hydrolase fold M1S38_18995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S38_18995 PF03466 LysR substrate binding domain M1S38_19000 PF01025 GrpE M1S38_19005 PF00012 Hsp70 protein M1S38_19025 PF13406 Transglycosylase SLT domain M1S38_19030 PF02222 ATP-grasp domain M1S38_19030 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M1S38_19035 PF00731 AIR carboxylase M1S38_19045 PF08245 Mur ligase middle domain M1S38_19045 PF02875 Mur ligase family, glutamate ligase domain M1S38_19045 PF01225 Mur ligase family, catalytic domain M1S38_19055 PF01569 PAP2 superfamily M1S38_19060 PF03741 Integral membrane protein TerC family M1S38_19070 PF03738 Glutathionylspermidine synthase preATP-grasp M1S38_19075 PF00355 Rieske [2Fe-2S] domain M1S38_19080 PF01979 Amidohydrolase family M1S38_19085 PF00156 Phosphoribosyl transferase domain M1S38_19095 PF10411 Disulfide bond isomerase protein N-terminus M1S38_19095 PF13098 Thioredoxin-like domain M1S38_19100 PF16916 Dimerisation domain of Zinc Transporter M1S38_19100 PF01545 Cation efflux family M1S38_19105 PF02583 Metal-sensitive transcriptional repressor M1S38_19110 PF01926 50S ribosome-binding GTPase M1S38_19110 PF12631 MnmE helical domain M1S38_19110 PF10396 GTP-binding protein TrmE N-terminus M1S38_19115 PF02096 60Kd inner membrane protein M1S38_19115 PF14849 YidC periplasmic domain M1S38_19120 PF01809 Putative membrane protein insertion efficiency factor M1S38_19125 PF00825 Ribonuclease P M1S38_19130 PF00468 Ribosomal protein L34 M1S38_19135 PF01051 Initiator Replication protein M1S38_19150 PF05973 Phage derived protein Gp49-like (DUF891) M1S38_19195 PF01051 Initiator Replication protein M1S38_19200 PF03389 MobA/MobL family M1S38_19200 PF16793 RepB DNA-primase from phage plasmid M1S38_19215 PF05973 Phage derived protein Gp49-like (DUF891) M1S38_19265 PF03389 MobA/MobL family M1S38_19280 PF05973 Phage derived protein Gp49-like (DUF891) M1S38_19325 PF03389 MobA/MobL family M1S38_19365 PF00593 TonB dependent receptor M1S38_19365 PF07715 TonB-dependent Receptor Plug Domain M1S38_19400 PF13614 AAA domain M1S38_19485 PF10544 T5orf172 domain M1S38_19490 PF13614 AAA domain M1S38_19510 PF00905 Penicillin binding protein transpeptidase domain M1S38_19555 PF00226 DnaJ domain M1S38_19555 PF01556 DnaJ C terminal domain M1S38_19555 PF00684 DnaJ central domain M1S38_19580 PF08751 TrwC relaxase M1S38_19580 PF18340 DNA relaxase TraI 2B/2B-like domain M1S38_19580 PF18272 single-stranded DNA binding TraI N-terminal subdomain M1S38_19580 PF07057 DNA helicase TraI M1S38_19635 PF02796 Helix-turn-helix domain of resolvase M1S38_19635 PF00239 Resolvase, N terminal domain M1S38_19685 PF10411 Disulfide bond isomerase protein N-terminus M1S38_19685 PF13098 Thioredoxin-like domain M1S38_19715 PF06834 TraU protein M1S38_19725 PF06986 Type-1V conjugative transfer system mating pair stabilisation M1S38_19735 PF06122 Conjugative relaxosome accessory transposon protein M1S38_19755 PF13438 Domain of unknown function (DUF4113) M1S38_19755 PF11799 impB/mucB/samB family C-terminal domain M1S38_19755 PF00817 impB/mucB/samB family M1S38_19805 PF00565 Staphylococcal nuclease homologue M1S38_19820 PF00816 H-NS histone family