locus-tag class description M1S43_00005 PF00308 Bacterial dnaA protein M1S43_00005 PF08299 Bacterial dnaA protein helix-turn-helix M1S43_00005 PF11638 DnaA N-terminal domain M1S43_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S43_00010 PF02767 DNA polymerase III beta subunit, central domain M1S43_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S43_00015 PF02463 RecF/RecN/SMC N terminal domain M1S43_00020 PF00204 DNA gyrase B M1S43_00020 PF00986 DNA gyrase B subunit, carboxyl terminus M1S43_00020 PF18053 DNA gyrase B subunit insert domain M1S43_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_00020 PF01751 Toprim domain M1S43_00045 PF12848 ABC transporter M1S43_00045 PF00005 ABC transporter M1S43_00065 PF01521 Iron-sulphur cluster biosynthesis M1S43_00070 PF00561 alpha/beta hydrolase fold M1S43_00075 PF03702 Anhydro-N-acetylmuramic acid kinase M1S43_00080 PF00579 tRNA synthetases class I (W and Y) M1S43_00120 PF00209 Sodium:neurotransmitter symporter family M1S43_00130 PF01189 16S rRNA methyltransferase RsmB/F M1S43_00130 PF01029 NusB family M1S43_00135 PF02911 Formyl transferase, C-terminal domain M1S43_00135 PF00551 Formyl transferase M1S43_00140 PF00920 Dehydratase family M1S43_00155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_00155 PF03466 LysR substrate binding domain M1S43_00160 PF00860 Permease family M1S43_00165 PF00311 Phosphoenolpyruvate carboxylase M1S43_00170 PF00440 Bacterial regulatory proteins, tetR family M1S43_00170 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S43_00175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S43_00180 PF00873 AcrB/AcrD/AcrF family M1S43_00190 PF00684 DnaJ central domain M1S43_00190 PF00226 DnaJ domain M1S43_00190 PF01556 DnaJ C terminal domain M1S43_00200 PF01113 Dihydrodipicolinate reductase, N-terminus M1S43_00200 PF05173 Dihydrodipicolinate reductase, C-terminus M1S43_00210 PF07690 Major Facilitator Superfamily M1S43_00215 PF00248 Aldo/keto reductase family M1S43_00220 PF03466 LysR substrate binding domain M1S43_00220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_00235 PF00392 Bacterial regulatory proteins, gntR family M1S43_00235 PF00155 Aminotransferase class I and II M1S43_00240 PF00107 Zinc-binding dehydrogenase M1S43_00240 PF08240 Alcohol dehydrogenase GroES-like domain M1S43_00245 PF03352 Methyladenine glycosylase M1S43_00260 PF10576 Iron-sulfur binding domain of endonuclease III M1S43_00260 PF00633 Helix-hairpin-helix motif M1S43_00260 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S43_00260 PF14815 NUDIX domain M1S43_00275 PF07043 Protein of unknown function (DUF1328) M1S43_00280 PF03692 Putative zinc- or iron-chelating domain M1S43_00285 PF07995 Glucose / Sorbosone dehydrogenase M1S43_00290 PF00004 ATPase family associated with various cellular activities (AAA) M1S43_00290 PF16193 AAA C-terminal domain M1S43_00290 PF12002 MgsA AAA+ ATPase C terminal M1S43_00295 PF01226 Formate/nitrite transporter M1S43_00305 PF01259 SAICAR synthetase M1S43_00315 PF00701 Dihydrodipicolinate synthetase family M1S43_00320 PF00857 Isochorismatase family M1S43_00325 PF01758 Sodium Bile acid symporter family M1S43_00330 PF01554 MatE M1S43_00335 PF04463 Protein of unknown function (DUF523) M1S43_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S43_00350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S43_00355 PF02798 Glutathione S-transferase, N-terminal domain M1S43_00355 PF14497 Glutathione S-transferase, C-terminal domain M1S43_00365 PF00324 Amino acid permease M1S43_00375 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S43_00375 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S43_00385 PF07702 UTRA domain M1S43_00385 PF00392 Bacterial regulatory proteins, gntR family M1S43_00390 PF05962 HutD M1S43_00395 PF17391 Urocanase N-terminal domain M1S43_00395 PF17392 Urocanase C-terminal domain M1S43_00395 PF01175 Urocanase Rossmann-like domain M1S43_00400 PF00221 Aromatic amino acid lyase M1S43_00405 PF00324 Amino acid permease M1S43_00410 PF01979 Amidohydrolase family M1S43_00415 PF00491 Arginase family M1S43_00430 PF01177 Asp/Glu/Hydantoin racemase M1S43_00435 PF01380 SIS domain M1S43_00440 PF00132 Bacterial transferase hexapeptide (six repeats) M1S43_00440 PF14602 Hexapeptide repeat of succinyl-transferase M1S43_00440 PF12804 MobA-like NTP transferase domain M1S43_00445 PF04608 Phosphatidylglycerophosphatase A M1S43_00450 PF00586 AIR synthase related protein, N-terminal domain M1S43_00450 PF02769 AIR synthase related protein, C-terminal domain M1S43_00455 PF01029 NusB family M1S43_00460 PF00885 6,7-dimethyl-8-ribityllumazine synthase M1S43_00465 PF00925 GTP cyclohydrolase II M1S43_00465 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S43_00490 PF02580 D-Tyr-tRNA(Tyr) deacylase M1S43_00495 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S43_00495 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M1S43_00500 PF00581 Rhodanese-like domain M1S43_00505 PF02666 Phosphatidylserine decarboxylase M1S43_00510 PF03069 Acetamidase/Formamidase family M1S43_00530 PF00512 His Kinase A (phospho-acceptor) domain M1S43_00530 PF00989 PAS fold M1S43_00530 PF11808 Phosphate regulon sensor protein PhoR M1S43_00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_00535 PF00072 Response regulator receiver domain M1S43_00535 PF00486 Transcriptional regulatory protein, C terminal M1S43_00545 PF00106 short chain dehydrogenase M1S43_00550 PF01554 MatE M1S43_00555 PF00155 Aminotransferase class I and II M1S43_00560 PF04286 Protein of unknown function (DUF445) M1S43_00575 PF04262 Glutamate-cysteine ligase M1S43_00580 PF02600 Disulfide bond formation protein DsbB M1S43_00585 PF04717 Type VI secretion system, phage-baseplate injector M1S43_00585 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S43_00585 PF13296 Putative type VI secretion system Rhs element Vgr M1S43_00590 PF01476 LysM domain M1S43_00590 PF00877 NlpC/P60 family M1S43_00605 PF05728 Uncharacterised protein family (UPF0227) M1S43_00610 PF01751 Toprim domain M1S43_00610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_00610 PF00986 DNA gyrase B subunit, carboxyl terminus M1S43_00610 PF00204 DNA gyrase B M1S43_00615 PF00106 short chain dehydrogenase M1S43_00620 PF04115 Ureidoglycolate lyase M1S43_00625 PF03561 Allantoicase repeat M1S43_00630 PF01494 FAD binding domain M1S43_00640 PF00860 Permease family M1S43_00645 PF00576 HIUase/Transthyretin family M1S43_00675 PF02683 Cytochrome C biogenesis protein transmembrane region M1S43_00675 PF11412 Disulphide bond corrector protein DsbC M1S43_00680 PF07694 5TMR of 5TMR-LYT M1S43_00680 PF00990 Diguanylate cyclase, GGDEF domain M1S43_00685 PF07859 alpha/beta hydrolase fold M1S43_00695 PF03960 ArsC family M1S43_00700 PF03372 Endonuclease/Exonuclease/phosphatase family M1S43_00705 PF00156 Phosphoribosyl transferase domain M1S43_00710 PF00593 TonB dependent receptor M1S43_00710 PF07715 TonB-dependent Receptor Plug Domain M1S43_00720 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M1S43_00720 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M1S43_00725 PF04101 Glycosyltransferase family 28 C-terminal domain M1S43_00725 PF03033 Glycosyltransferase family 28 N-terminal domain M1S43_00730 PF01225 Mur ligase family, catalytic domain M1S43_00730 PF08245 Mur ligase middle domain M1S43_00730 PF02875 Mur ligase family, glutamate ligase domain M1S43_00735 PF01820 D-ala D-ala ligase N-terminus M1S43_00735 PF07478 D-ala D-ala ligase C-terminus M1S43_00740 PF08478 POTRA domain, FtsQ-type M1S43_00740 PF03799 Cell division protein FtsQ M1S43_00745 PF02491 SHS2 domain inserted in FTSA M1S43_00750 PF00091 Tubulin/FtsZ family, GTPase domain M1S43_00750 PF12327 FtsZ family, C-terminal domain M1S43_00755 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M1S43_00765 PF01551 Peptidase family M23 M1S43_00770 PF00456 Transketolase, thiamine diphosphate binding domain M1S43_00770 PF17831 Pyruvate dehydrogenase E1 component middle domain M1S43_00775 PF02817 e3 binding domain M1S43_00775 PF00364 Biotin-requiring enzyme M1S43_00775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S43_00785 PF01169 Uncharacterized protein family UPF0016 M1S43_00805 PF00258 Flavodoxin M1S43_00805 PF01613 Flavin reductase like domain M1S43_00810 PF03692 Putative zinc- or iron-chelating domain M1S43_00815 PF00478 IMP dehydrogenase / GMP reductase domain M1S43_00815 PF00571 CBS domain M1S43_00820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S43_00820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S43_00820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S43_00820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S43_00825 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M1S43_00825 PF01243 Pyridoxamine 5'-phosphate oxidase M1S43_00830 PF01368 DHH family M1S43_00830 PF02272 DHHA1 domain M1S43_00830 PF17768 RecJ OB domain M1S43_00850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S43_00855 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M1S43_00860 PF04452 RNA methyltransferase M1S43_00865 PF00924 Mechanosensitive ion channel M1S43_00875 PF00501 AMP-binding enzyme M1S43_00875 PF13193 AMP-binding enzyme C-terminal domain M1S43_00875 PF16177 Acetyl-coenzyme A synthetase N-terminus M1S43_00880 PF00857 Isochorismatase family M1S43_00885 PF01037 Lrp/AsnC ligand binding domain M1S43_00890 PF00872 Transposase, Mutator family M1S43_00900 PF00296 Luciferase-like monooxygenase M1S43_00905 PF03358 NADPH-dependent FMN reductase M1S43_00910 PF00072 Response regulator receiver domain M1S43_00910 PF00196 Bacterial regulatory proteins, luxR family M1S43_00920 PF00672 HAMP domain M1S43_00920 PF00512 His Kinase A (phospho-acceptor) domain M1S43_00920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_00920 PF01627 Hpt domain M1S43_00920 PF00072 Response regulator receiver domain M1S43_00925 PF04341 Protein of unknown function, DUF485 M1S43_00930 PF00474 Sodium:solute symporter family M1S43_00940 PF02028 BCCT, betaine/carnitine/choline family transporter M1S43_00950 PF00990 Diguanylate cyclase, GGDEF domain M1S43_00960 PF17755 UvrA DNA-binding domain M1S43_00960 PF17760 UvrA interaction domain M1S43_00960 PF00005 ABC transporter M1S43_00965 PF00440 Bacterial regulatory proteins, tetR family M1S43_00965 PF16925 Tetracyclin repressor-like, C-terminal domain M1S43_00970 PF00107 Zinc-binding dehydrogenase M1S43_00970 PF08240 Alcohol dehydrogenase GroES-like domain M1S43_00980 PF06942 GlpM protein M1S43_00985 PF03070 TENA/THI-4/PQQC family M1S43_00985 PF08543 Phosphomethylpyrimidine kinase M1S43_00985 PF02581 Thiamine monophosphate synthase M1S43_00995 PF07690 Major Facilitator Superfamily M1S43_01000 PF00436 Single-strand binding protein family M1S43_01010 PF03591 AzlC protein M1S43_01020 PF00324 Amino acid permease M1S43_01025 PF00155 Aminotransferase class I and II M1S43_01025 PF00392 Bacterial regulatory proteins, gntR family M1S43_01030 PF00202 Aminotransferase class-III M1S43_01040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_01045 PF00857 Isochorismatase family M1S43_01050 PF05726 Pirin C-terminal cupin domain M1S43_01050 PF02678 Pirin M1S43_01055 PF01593 Flavin containing amine oxidoreductase M1S43_01075 PF07690 Major Facilitator Superfamily M1S43_01080 PF03466 LysR substrate binding domain M1S43_01080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_01100 PF00248 Aldo/keto reductase family M1S43_01105 PF12833 Helix-turn-helix domain M1S43_01105 PF02311 AraC-like ligand binding domain M1S43_01135 PF01638 HxlR-like helix-turn-helix M1S43_01140 PF02525 Flavodoxin-like fold M1S43_01160 PF02705 K+ potassium transporter M1S43_01185 PF00230 Major intrinsic protein M1S43_01200 PF00977 Histidine biosynthesis protein M1S43_01205 PF01636 Phosphotransferase enzyme family M1S43_01225 PF03992 Antibiotic biosynthesis monooxygenase M1S43_01240 PF00977 Histidine biosynthesis protein M1S43_01255 PF00117 Glutamine amidotransferase class-I M1S43_01260 PF00475 Imidazoleglycerol-phosphate dehydratase M1S43_01280 PF00583 Acetyltransferase (GNAT) family M1S43_01285 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M1S43_01285 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M1S43_01295 PF00672 HAMP domain M1S43_01295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_01295 PF00512 His Kinase A (phospho-acceptor) domain M1S43_01300 PF00072 Response regulator receiver domain M1S43_01300 PF00486 Transcriptional regulatory protein, C terminal M1S43_01305 PF17674 HHH domain M1S43_01305 PF09371 Tex-like protein N-terminal domain M1S43_01305 PF16921 Tex protein YqgF-like domain M1S43_01305 PF00575 S1 RNA binding domain M1S43_01310 PF01740 STAS domain M1S43_01310 PF00916 Sulfate permease family M1S43_01315 PF00106 short chain dehydrogenase M1S43_01320 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S43_01325 PF12848 ABC transporter M1S43_01325 PF00005 ABC transporter M1S43_01350 PF04191 Phospholipid methyltransferase M1S43_01370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S43_01370 PF00529 HlyD membrane-fusion protein of T1SS M1S43_01375 PF00873 AcrB/AcrD/AcrF family M1S43_01380 PF01545 Cation efflux family M1S43_01410 PF00324 Amino acid permease M1S43_01425 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S43_01440 PF01795 MraW methylase family M1S43_01450 PF03717 Penicillin-binding Protein dimerisation domain M1S43_01450 PF00905 Penicillin binding protein transpeptidase domain M1S43_01455 PF08245 Mur ligase middle domain M1S43_01455 PF02875 Mur ligase family, glutamate ligase domain M1S43_01455 PF01225 Mur ligase family, catalytic domain M1S43_01460 PF01225 Mur ligase family, catalytic domain M1S43_01460 PF02875 Mur ligase family, glutamate ligase domain M1S43_01460 PF08245 Mur ligase middle domain M1S43_01465 PF00953 Glycosyl transferase family 4 M1S43_01475 PF13847 Methyltransferase domain M1S43_01480 PF17092 Penicillin-binding protein OB-like domain M1S43_01480 PF00912 Transglycosylase M1S43_01480 PF00905 Penicillin binding protein transpeptidase domain M1S43_01485 PF11104 Type IV pilus assembly protein PilM; M1S43_01490 PF05137 Fimbrial assembly protein (PilN) M1S43_01495 PF04350 Pilus assembly protein, PilO M1S43_01505 PF11741 AMIN domain M1S43_01505 PF00263 Bacterial type II and III secretion system protein M1S43_01505 PF03958 Bacterial type II/III secretion system short domain M1S43_01505 PF07660 Secretin and TonB N terminus short domain M1S43_01510 PF01202 Shikimate kinase M1S43_01515 PF01761 3-dehydroquinate synthase M1S43_01525 PF01645 Conserved region in glutamate synthase M1S43_01525 PF04898 Glutamate synthase central domain M1S43_01525 PF01493 GXGXG motif M1S43_01525 PF00310 Glutamine amidotransferases class-II M1S43_01530 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M1S43_01530 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_01540 PF04011 LemA family M1S43_01545 PF04536 TPM domain M1S43_01555 PF07963 Prokaryotic N-terminal methylation motif M1S43_01555 PF00114 Pilin (bacterial filament) M1S43_01565 PF11846 Virulence factor membrane-bound polymerase, C-terminal M1S43_01565 PF04932 O-Antigen ligase M1S43_01565 PF15864 Protein glycosylation ligase M1S43_01570 PF00210 Ferritin-like domain M1S43_01575 PF04324 BFD-like [2Fe-2S] binding domain M1S43_01580 PF01042 Endoribonuclease L-PSP M1S43_01585 PF02824 TGS domain M1S43_01585 PF04607 Region found in RelA / SpoT proteins M1S43_01585 PF13291 ACT domain M1S43_01595 PF01192 RNA polymerase Rpb6 M1S43_01600 PF00625 Guanylate kinase M1S43_01605 PF02401 LytB protein M1S43_01645 PF00886 Ribosomal protein S16 M1S43_01650 PF01782 RimM N-terminal domain M1S43_01650 PF05239 PRC-barrel domain M1S43_01655 PF01746 tRNA (Guanine-1)-methyltransferase M1S43_01660 PF01245 Ribosomal protein L19 M1S43_01665 PF00561 alpha/beta hydrolase fold M1S43_01670 PF03280 Proteobacterial lipase chaperone protein M1S43_01675 PF09157 Pseudouridine synthase II TruB, C-terminal M1S43_01675 PF01509 TruB family pseudouridylate synthase (N terminal domain) M1S43_01675 PF16198 tRNA pseudouridylate synthase B C-terminal domain M1S43_01680 PF01925 Sulfite exporter TauE/SafE M1S43_01690 PF00892 EamA-like transporter family M1S43_01695 PF00892 EamA-like transporter family M1S43_01700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S43_01700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S43_01705 PF02913 FAD linked oxidases, C-terminal domain M1S43_01705 PF01565 FAD binding domain M1S43_01715 PF03992 Antibiotic biosynthesis monooxygenase M1S43_01720 PF02525 Flavodoxin-like fold M1S43_01730 PF07690 Major Facilitator Superfamily M1S43_01735 PF12805 FUSC-like inner membrane protein yccS M1S43_01740 PF00080 Copper/zinc superoxide dismutase (SODC) M1S43_01745 PF01594 AI-2E family transporter M1S43_01750 PF13614 AAA domain M1S43_01780 PF00324 Amino acid permease M1S43_01785 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S43_01785 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S43_01790 PF00202 Aminotransferase class-III M1S43_01795 PF04958 Arginine N-succinyltransferase beta subunit M1S43_01800 PF00171 Aldehyde dehydrogenase family M1S43_01805 PF04996 Succinylarginine dihydrolase M1S43_01810 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M1S43_01825 PF05922 Peptidase inhibitor I9 M1S43_01825 PF00082 Subtilase family M1S43_01840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_01840 PF03466 LysR substrate binding domain M1S43_01845 PF00892 EamA-like transporter family M1S43_01855 PF05746 DALR anticodon binding domain M1S43_01855 PF02092 Glycyl-tRNA synthetase beta subunit M1S43_01860 PF02091 Glycyl-tRNA synthetase alpha subunit M1S43_01885 PF00571 CBS domain M1S43_01890 PF04024 PspC domain M1S43_01900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_01900 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_01900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_01900 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S43_01910 PF08501 Shikimate dehydrogenase substrate binding domain M1S43_01910 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M1S43_01910 PF01488 Shikimate / quinate 5-dehydrogenase M1S43_01915 PF01218 Coproporphyrinogen III oxidase M1S43_01920 PF00925 GTP cyclohydrolase II M1S43_01925 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M1S43_01925 PF02779 Transketolase, pyrimidine binding domain M1S43_01925 PF02780 Transketolase, C-terminal domain M1S43_01930 PF00459 Inositol monophosphatase family M1S43_01935 PF03880 DbpA RNA binding domain M1S43_01935 PF00270 DEAD/DEAH box helicase M1S43_01935 PF12343 Cold shock protein DEAD box A M1S43_01935 PF00271 Helicase conserved C-terminal domain M1S43_01945 PF00005 ABC transporter M1S43_01950 PF02405 Permease MlaE M1S43_01960 PF05494 MlaC protein M1S43_01970 PF01544 CorA-like Mg2+ transporter protein M1S43_01975 PF03641 Possible lysine decarboxylase M1S43_01980 PF00293 NUDIX domain M1S43_01985 PF00156 Phosphoribosyl transferase domain M1S43_01990 PF00270 DEAD/DEAH box helicase M1S43_01990 PF00271 Helicase conserved C-terminal domain M1S43_01990 PF17191 RecG wedge domain M1S43_02005 PF01553 Acyltransferase M1S43_02015 PF00375 Sodium:dicarboxylate symporter family M1S43_02025 PF01926 50S ribosome-binding GTPase M1S43_02030 PF02082 Transcriptional regulator M1S43_02035 PF00970 Oxidoreductase FAD-binding domain M1S43_02035 PF00042 Globin M1S43_02035 PF00175 Oxidoreductase NAD-binding domain M1S43_02040 PF05872 Bacterial protein of unknown function (DUF853) M1S43_02045 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S43_02050 PF00117 Glutamine amidotransferase class-I M1S43_02055 PF00338 Ribosomal protein S10p/S20e M1S43_02060 PF00297 Ribosomal protein L3 M1S43_02065 PF00573 Ribosomal protein L4/L1 family M1S43_02070 PF00276 Ribosomal protein L23 M1S43_02075 PF03947 Ribosomal Proteins L2, C-terminal domain M1S43_02075 PF00181 Ribosomal Proteins L2, RNA binding domain M1S43_02080 PF00203 Ribosomal protein S19 M1S43_02085 PF00237 Ribosomal protein L22p/L17e M1S43_02095 PF00252 Ribosomal protein L16p/L10e M1S43_02100 PF00831 Ribosomal L29 protein M1S43_02105 PF00366 Ribosomal protein S17 M1S43_02110 PF00238 Ribosomal protein L14p/L23e M1S43_02115 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M1S43_02115 PF00467 KOW motif M1S43_02120 PF00281 Ribosomal protein L5 M1S43_02120 PF00673 ribosomal L5P family C-terminus M1S43_02125 PF00253 Ribosomal protein S14p/S29e M1S43_02130 PF00410 Ribosomal protein S8 M1S43_02135 PF00347 Ribosomal protein L6 M1S43_02140 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M1S43_02145 PF00333 Ribosomal protein S5, N-terminal domain M1S43_02145 PF03719 Ribosomal protein S5, C-terminal domain M1S43_02150 PF00327 Ribosomal protein L30p/L7e M1S43_02155 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M1S43_02160 PF00344 SecY translocase M1S43_02165 PF00444 Ribosomal protein L36 M1S43_02170 PF00416 Ribosomal protein S13/S18 M1S43_02175 PF00411 Ribosomal protein S11 M1S43_02180 PF00163 Ribosomal protein S4/S9 N-terminal domain M1S43_02180 PF01479 S4 domain M1S43_02185 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M1S43_02185 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M1S43_02185 PF01000 RNA polymerase Rpb3/RpoA insert domain M1S43_02190 PF01196 Ribosomal protein L17 M1S43_02195 PF00743 Flavin-binding monooxygenase-like M1S43_02200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_02200 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_02200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_02205 PF03937 Flavinator of succinate dehydrogenase M1S43_02235 PF09526 Probable metal-binding protein (DUF2387) M1S43_02240 PF01432 Peptidase family M3 M1S43_02245 PF17876 Cold shock domain M1S43_02245 PF00575 S1 RNA binding domain M1S43_02245 PF08461 Ribonuclease R winged-helix domain M1S43_02245 PF08206 Ribonuclease B OB domain M1S43_02245 PF00773 RNB domain M1S43_02290 PF01557 Fumarylacetoacetate (FAA) hydrolase family M1S43_02295 PF12833 Helix-turn-helix domain M1S43_02300 PF00892 EamA-like transporter family M1S43_02305 PF03631 Virulence factor BrkB M1S43_02310 PF03358 NADPH-dependent FMN reductase M1S43_02335 PF02130 Uncharacterized protein family UPF0054 M1S43_02340 PF02562 PhoH-like protein M1S43_02345 PF04055 Radical SAM superfamily M1S43_02345 PF01938 TRAM domain M1S43_02345 PF00919 Uncharacterized protein family UPF0004 M1S43_02350 PF10145 Phage-related minor tail protein M1S43_02350 PF01464 Transglycosylase SLT domain M1S43_02350 PF01551 Peptidase family M23 M1S43_02360 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1S43_02360 PF00056 lactate/malate dehydrogenase, NAD binding domain M1S43_02380 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M1S43_02385 PF01066 CDP-alcohol phosphatidyltransferase M1S43_02430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_02430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_02430 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_02435 PF17932 Tetracyclin repressor-like, C-terminal domain M1S43_02435 PF00440 Bacterial regulatory proteins, tetR family M1S43_02450 PF01039 Carboxyl transferase domain M1S43_02455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_02455 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_02455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_02465 PF02785 Biotin carboxylase C-terminal domain M1S43_02465 PF00289 Biotin carboxylase, N-terminal domain M1S43_02465 PF00364 Biotin-requiring enzyme M1S43_02465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S43_02475 PF04386 Stringent starvation protein B M1S43_02480 PF00043 Glutathione S-transferase, C-terminal domain M1S43_02480 PF13417 Glutathione S-transferase, N-terminal domain M1S43_02485 PF00380 Ribosomal protein S9/S16 M1S43_02490 PF00572 Ribosomal protein L13 M1S43_02495 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M1S43_02500 PF00398 Ribosomal RNA adenine dimethylase M1S43_02505 PF00149 Calcineurin-like phosphoesterase M1S43_02525 PF16360 GTP-binding GTPase Middle Region M1S43_02525 PF13167 GTP-binding GTPase N-terminal M1S43_02525 PF01926 50S ribosome-binding GTPase M1S43_02535 PF13091 PLD-like domain M1S43_02540 PF10518 TAT (twin-arginine translocation) pathway signal sequence M1S43_02540 PF00149 Calcineurin-like phosphoesterase M1S43_02545 PF00691 OmpA family M1S43_02545 PF01389 OmpA-like transmembrane domain M1S43_02550 PF17152 Periplasmic sensor domain M1S43_02550 PF00990 Diguanylate cyclase, GGDEF domain M1S43_02585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S43_02585 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_02595 PF00753 Metallo-beta-lactamase superfamily M1S43_02595 PF04273 Putative phosphatase (DUF442) M1S43_02600 PF00561 alpha/beta hydrolase fold M1S43_02605 PF00085 Thioredoxin M1S43_02610 PF03061 Thioesterase superfamily M1S43_02620 PF04461 Protein of unknown function (DUF520) M1S43_02630 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S43_02630 PF01266 FAD dependent oxidoreductase M1S43_02640 PF03795 YCII-related domain M1S43_02645 PF04279 Intracellular septation protein A M1S43_02650 PF02811 PHP domain M1S43_02655 PF01062 Bestrophin, RFP-TM, chloride channel M1S43_02660 PF04002 RadC-like JAB domain M1S43_02665 PF04127 DNA / pantothenate metabolism flavoprotein M1S43_02665 PF02441 Flavoprotein M1S43_02670 PF07549 SecD/SecF GG Motif M1S43_02670 PF02355 Protein export membrane protein M1S43_02675 PF07549 SecD/SecF GG Motif M1S43_02675 PF13721 SecD export protein N-terminal TM region M1S43_02675 PF02355 Protein export membrane protein M1S43_02680 PF02699 Preprotein translocase subunit M1S43_02685 PF01702 Queuine tRNA-ribosyltransferase M1S43_02700 PF02547 Queuosine biosynthesis protein M1S43_02730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_02730 PF07689 KaiB domain M1S43_02730 PF00512 His Kinase A (phospho-acceptor) domain M1S43_02735 PF03710 Glutamate-ammonia ligase adenylyltransferase M1S43_02735 PF08335 GlnD PII-uridylyltransferase M1S43_02740 PF01063 Amino-transferase class IV M1S43_02755 PF01522 Polysaccharide deacetylase M1S43_02760 PF00535 Glycosyl transferase family 2 M1S43_02765 PF13439 Glycosyltransferase Family 4 M1S43_02765 PF00534 Glycosyl transferases group 1 M1S43_02790 PF17101 Stealth protein CR1, conserved region 1 M1S43_02790 PF17102 Stealth protein CR3, conserved region 3 M1S43_02790 PF11380 Stealth protein CR2, conserved region 2 M1S43_02795 PF02938 GAD domain M1S43_02795 PF00152 tRNA synthetases class II (D, K and N) M1S43_02795 PF01336 OB-fold nucleic acid binding domain M1S43_02805 PF07715 TonB-dependent Receptor Plug Domain M1S43_02805 PF00593 TonB dependent receptor M1S43_02825 PF06146 Phosphate-starvation-inducible E M1S43_02830 PF02798 Glutathione S-transferase, N-terminal domain M1S43_02830 PF00043 Glutathione S-transferase, C-terminal domain M1S43_02835 PF03466 LysR substrate binding domain M1S43_02835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_02840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_02840 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S43_02840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_02840 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_02845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_02845 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S43_02845 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_02845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_02855 PF00512 His Kinase A (phospho-acceptor) domain M1S43_02855 PF00672 HAMP domain M1S43_02855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_02860 PF00486 Transcriptional regulatory protein, C terminal M1S43_02860 PF00072 Response regulator receiver domain M1S43_02865 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M1S43_02885 PF01923 Cobalamin adenosyltransferase M1S43_02890 PF07715 TonB-dependent Receptor Plug Domain M1S43_02890 PF00593 TonB dependent receptor M1S43_02895 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M1S43_02900 PF00291 Pyridoxal-phosphate dependent enzyme M1S43_02925 PF00290 Tryptophan synthase alpha chain M1S43_02930 PF01039 Carboxyl transferase domain M1S43_02935 PF08245 Mur ligase middle domain M1S43_02935 PF02875 Mur ligase family, glutamate ligase domain M1S43_02950 PF00753 Metallo-beta-lactamase superfamily M1S43_02955 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S43_02955 PF00578 AhpC/TSA family M1S43_02960 PF07516 SecA Wing and Scaffold domain M1S43_02960 PF07517 SecA DEAD-like domain M1S43_02960 PF01043 SecA preprotein cross-linking domain M1S43_02960 PF02810 SEC-C motif M1S43_02970 PF00083 Sugar (and other) transporter M1S43_02970 PF07690 Major Facilitator Superfamily M1S43_02975 PF03006 Haemolysin-III related M1S43_03000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S43_03000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S43_03000 PF00378 Enoyl-CoA hydratase/isomerase M1S43_03005 PF02803 Thiolase, C-terminal domain M1S43_03005 PF00108 Thiolase, N-terminal domain M1S43_03010 PF02311 AraC-like ligand binding domain M1S43_03010 PF12833 Helix-turn-helix domain M1S43_03015 PF02515 CoA-transferase family III M1S43_03020 PF04966 Carbohydrate-selective porin, OprB family M1S43_03025 PF01011 PQQ enzyme repeat M1S43_03030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S43_03030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S43_03040 PF00893 Small Multidrug Resistance protein M1S43_03050 PF00108 Thiolase, N-terminal domain M1S43_03050 PF02803 Thiolase, C-terminal domain M1S43_03060 PF00691 OmpA family M1S43_03060 PF13505 Outer membrane protein beta-barrel domain M1S43_03070 PF01139 tRNA-splicing ligase RtcB M1S43_03075 PF00324 Amino acid permease M1S43_03080 PF05175 Methyltransferase small domain M1S43_03080 PF08468 Methyltransferase small domain N-terminal M1S43_03085 PF00860 Permease family M1S43_03090 PF00679 Elongation factor G C-terminus M1S43_03090 PF00009 Elongation factor Tu GTP binding domain M1S43_03090 PF03144 Elongation factor Tu domain 2 M1S43_03095 PF01741 Large-conductance mechanosensitive channel, MscL M1S43_03110 PF06827 Zinc finger found in FPG and IleRS M1S43_03110 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M1S43_03110 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M1S43_03115 PF02245 Methylpurine-DNA glycosylase (MPG) M1S43_03135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S43_03150 PF10411 Disulfide bond isomerase protein N-terminus M1S43_03150 PF13098 Thioredoxin-like domain M1S43_03155 PF01571 Aminomethyltransferase folate-binding domain M1S43_03165 PF04343 Protein of unknown function, DUF488 M1S43_03170 PF03831 PhnA domain M1S43_03170 PF08274 PhnA Zinc-Ribbon M1S43_03175 PF07411 Domain of unknown function (DUF1508) M1S43_03180 PF04073 Aminoacyl-tRNA editing domain M1S43_03180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S43_03180 PF03129 Anticodon binding domain M1S43_03185 PF00873 AcrB/AcrD/AcrF family M1S43_03200 PF00072 Response regulator receiver domain M1S43_03205 PF00072 Response regulator receiver domain M1S43_03210 PF01584 CheW-like domain M1S43_03215 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M1S43_03215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M1S43_03220 PF01627 Hpt domain M1S43_03220 PF01584 CheW-like domain M1S43_03220 PF00072 Response regulator receiver domain M1S43_03220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_03230 PF07687 Peptidase dimerisation domain M1S43_03230 PF01546 Peptidase family M20/M25/M40 M1S43_03235 PF08085 Entericidin EcnA/B family M1S43_03245 PF04304 Protein of unknown function (DUF454) M1S43_03250 PF17969 L,D-transpeptidase C-terminal domain M1S43_03250 PF03734 L,D-transpeptidase catalytic domain M1S43_03290 PF00667 FAD binding domain M1S43_03290 PF00258 Flavodoxin M1S43_03290 PF00175 Oxidoreductase NAD-binding domain M1S43_03300 PF12805 FUSC-like inner membrane protein yccS M1S43_03305 PF07690 Major Facilitator Superfamily M1S43_03310 PF00881 Nitroreductase family M1S43_03325 PF01235 Sodium:alanine symporter family M1S43_03330 PF01734 Patatin-like phospholipase M1S43_03335 PF00291 Pyridoxal-phosphate dependent enzyme M1S43_03335 PF13291 ACT domain M1S43_03340 PF05992 SbmA/BacA-like family M1S43_03370 PF02934 GatB/GatE catalytic domain M1S43_03370 PF02637 GatB domain M1S43_03375 PF01425 Amidase M1S43_03380 PF02686 Glu-tRNAGln amidotransferase C subunit M1S43_03390 PF04085 rod shape-determining protein MreC M1S43_03395 PF04093 rod shape-determining protein MreD M1S43_03400 PF02545 Maf-like protein M1S43_03405 PF10150 Ribonuclease E/G family M1S43_03405 PF00575 S1 RNA binding domain M1S43_03415 PF06974 Protein of unknown function (DUF1298) M1S43_03415 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain M1S43_03420 PF01507 Phosphoadenosine phosphosulfate reductase family M1S43_03435 PF02525 Flavodoxin-like fold M1S43_03455 PF02673 Bacitracin resistance protein BacA M1S43_03460 PF06719 AraC-type transcriptional regulator N-terminus M1S43_03460 PF12833 Helix-turn-helix domain M1S43_03465 PF09277 Erythronolide synthase, docking M1S43_03465 PF08990 Erythronolide synthase docking M1S43_03465 PF00550 Phosphopantetheine attachment site M1S43_03465 PF00698 Acyl transferase domain M1S43_03465 PF14765 Polyketide synthase dehydratase M1S43_03465 PF08659 KR domain M1S43_03465 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S43_03465 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S43_03465 PF16197 Ketoacyl-synthetase C-terminal extension M1S43_03465 PF08240 Alcohol dehydrogenase GroES-like domain M1S43_03470 PF01965 DJ-1/PfpI family M1S43_03480 PF00324 Amino acid permease M1S43_03485 PF04303 PrpF protein M1S43_03490 PF00348 Polyprenyl synthetase M1S43_03495 PF04237 YjbR M1S43_03500 PF01145 SPFH domain / Band 7 family M1S43_03510 PF01734 Patatin-like phospholipase M1S43_03840 PF08019 Phosphoethanolamine transferase EptA/EptB M1S43_03840 PF00884 Sulfatase M1S43_03845 PF00072 Response regulator receiver domain M1S43_03845 PF00486 Transcriptional regulatory protein, C terminal M1S43_03850 PF00512 His Kinase A (phospho-acceptor) domain M1S43_03850 PF08521 Two-component sensor kinase N-terminal M1S43_03850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_03860 PF00909 Ammonium Transporter Family M1S43_03865 PF03466 LysR substrate binding domain M1S43_03865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_03885 PF08264 Anticodon-binding domain of tRNA M1S43_03885 PF00133 tRNA synthetases class I (I, L, M and V) M1S43_03885 PF10458 Valyl tRNA synthetase tRNA binding arm M1S43_03905 PF01906 Putative heavy-metal-binding M1S43_03910 PF01906 Putative heavy-metal-binding M1S43_03915 PF02321 Outer membrane efflux protein M1S43_03920 PF00873 AcrB/AcrD/AcrF family M1S43_03925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S43_03925 PF00529 HlyD membrane-fusion protein of T1SS M1S43_03930 PF01569 PAP2 superfamily M1S43_03940 PF00348 Polyprenyl synthetase M1S43_03950 PF00829 Ribosomal prokaryotic L21 protein M1S43_03955 PF01016 Ribosomal L27 protein M1S43_03960 PF03548 Outer membrane lipoprotein carrier protein LolA M1S43_03970 PF02403 Seryl-tRNA synthetase N-terminal domain M1S43_03970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S43_03975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S43_03975 PF14824 Sirohaem biosynthesis protein central M1S43_03975 PF10414 Sirohaem synthase dimerisation region M1S43_03980 PF00588 SpoU rRNA Methylase family M1S43_03985 PF01638 HxlR-like helix-turn-helix M1S43_03990 PF03358 NADPH-dependent FMN reductase M1S43_03995 PF13520 Amino acid permease M1S43_04000 PF00465 Iron-containing alcohol dehydrogenase M1S43_04010 PF03099 Biotin/lipoate A/B protein ligase family M1S43_04015 PF04359 Protein of unknown function (DUF493) M1S43_04020 PF04539 Sigma-70 region 3 M1S43_04020 PF04545 Sigma-70, region 4 M1S43_04020 PF04542 Sigma-70 region 2 M1S43_04020 PF03979 Sigma-70 factor, region 1.1 M1S43_04020 PF00140 Sigma-70 factor, region 1.2 M1S43_04020 PF04546 Sigma-70, non-essential region M1S43_04040 PF00581 Rhodanese-like domain M1S43_04040 PF17773 UPF0176 acylphosphatase like domain M1S43_04050 PF00285 Citrate synthase, C-terminal domain M1S43_04055 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S43_04060 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S43_04065 PF00890 FAD binding domain M1S43_04065 PF02910 Fumarate reductase flavoprotein C-term M1S43_04070 PF13085 2Fe-2S iron-sulfur cluster binding domain M1S43_04085 PF16078 2-oxoglutarate dehydrogenase N-terminus M1S43_04085 PF00676 Dehydrogenase E1 component M1S43_04085 PF16870 2-oxoglutarate dehydrogenase C-terminal M1S43_04085 PF02779 Transketolase, pyrimidine binding domain M1S43_04090 PF02817 e3 binding domain M1S43_04090 PF00364 Biotin-requiring enzyme M1S43_04090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S43_04095 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_04095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S43_04100 PF08442 ATP-grasp domain M1S43_04100 PF00549 CoA-ligase M1S43_04105 PF02629 CoA binding domain M1S43_04105 PF00549 CoA-ligase M1S43_04110 PF00579 tRNA synthetases class I (W and Y) M1S43_04115 PF05661 Protein of unknown function (DUF808) M1S43_04120 PF04228 Putative neutral zinc metallopeptidase M1S43_04125 PF00999 Sodium/hydrogen exchanger family M1S43_04160 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S43_04165 PF00582 Universal stress protein family M1S43_04170 PF00132 Bacterial transferase hexapeptide (six repeats) M1S43_04175 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S43_04175 PF03449 Transcription elongation factor, N-terminal M1S43_04180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S43_04180 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M1S43_04180 PF02142 MGS-like domain M1S43_04185 PF00117 Glutamine amidotransferase class-I M1S43_04185 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M1S43_04200 PF01985 CRS1 / YhbY (CRM) domain M1S43_04205 PF01728 FtsJ-like methyltransferase M1S43_04210 PF06480 FtsH Extracellular M1S43_04210 PF17862 AAA+ lid domain M1S43_04210 PF00004 ATPase family associated with various cellular activities (AAA) M1S43_04210 PF01434 Peptidase family M41 M1S43_04215 PF00809 Pterin binding enzyme M1S43_04235 PF09423 PhoD-like phosphatase M1S43_04235 PF16655 PhoD-like phosphatase, N-terminal domain M1S43_04250 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M1S43_04250 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M1S43_04265 PF00083 Sugar (and other) transporter M1S43_04270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1S43_04270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1S43_04275 PF01266 FAD dependent oxidoreductase M1S43_04275 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M1S43_04280 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1S43_04280 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1S43_04285 PF00781 Diacylglycerol kinase catalytic domain M1S43_04290 PF00149 Calcineurin-like phosphoesterase M1S43_04300 PF00166 Chaperonin 10 Kd subunit M1S43_04305 PF00118 TCP-1/cpn60 chaperonin family M1S43_04310 PF01219 Prokaryotic diacylglycerol kinase M1S43_04315 PF00753 Metallo-beta-lactamase superfamily M1S43_04320 PF03009 Glycerophosphoryl diester phosphodiesterase family M1S43_04325 PF00873 AcrB/AcrD/AcrF family M1S43_04335 PF01435 Peptidase family M48 M1S43_04340 PF01464 Transglycosylase SLT domain M1S43_04345 PF01171 PP-loop family M1S43_04355 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S43_04355 PF01464 Transglycosylase SLT domain M1S43_04360 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S43_04360 PF03449 Transcription elongation factor, N-terminal M1S43_04375 PF00501 AMP-binding enzyme M1S43_04375 PF13193 AMP-binding enzyme C-terminal domain M1S43_04375 PF00668 Condensation domain M1S43_04375 PF00550 Phosphopantetheine attachment site M1S43_04375 PF00975 Thioesterase domain M1S43_04405 PF00881 Nitroreductase family M1S43_04420 PF02595 Glycerate kinase family M1S43_04430 PF02634 FdhD/NarQ family M1S43_04435 PF06803 Protein of unknown function (DUF1232) M1S43_04440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S43_04440 PF11890 Domain of unknown function (DUF3410) M1S43_04440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S43_04445 PF00152 tRNA synthetases class II (D, K and N) M1S43_04455 PF18073 Rubredoxin metal binding domain M1S43_04460 PF00324 Amino acid permease M1S43_04470 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M1S43_04470 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M1S43_04475 PF01678 Diaminopimelate epimerase M1S43_04480 PF01810 LysE type translocator M1S43_04485 PF02899 Phage integrase, N-terminal SAM-like domain M1S43_04485 PF00589 Phage integrase family M1S43_04490 PF01012 Electron transfer flavoprotein domain M1S43_04495 PF01012 Electron transfer flavoprotein domain M1S43_04495 PF00766 Electron transfer flavoprotein FAD-binding domain M1S43_04500 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S43_04500 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S43_04515 PF00535 Glycosyl transferase family 2 M1S43_04535 PF13533 Biotin-lipoyl like M1S43_04545 PF00266 Aminotransferase class-V M1S43_04560 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M1S43_04570 PF02687 FtsX-like permease family M1S43_04570 PF12704 MacB-like periplasmic core domain M1S43_04575 PF00005 ABC transporter M1S43_04580 PF00753 Metallo-beta-lactamase superfamily M1S43_04580 PF03772 Competence protein M1S43_04580 PF13567 Domain of unknown function (DUF4131) M1S43_04590 PF06965 Na+/H+ antiporter 1 M1S43_04590 PF01343 Peptidase family S49 M1S43_04595 PF12697 Alpha/beta hydrolase family M1S43_04600 PF00551 Formyl transferase M1S43_04605 PF00586 AIR synthase related protein, N-terminal domain M1S43_04605 PF02769 AIR synthase related protein, C-terminal domain M1S43_04610 PF01594 AI-2E family transporter M1S43_04615 PF00308 Bacterial dnaA protein M1S43_04615 PF11638 DnaA N-terminal domain M1S43_04615 PF08299 Bacterial dnaA protein helix-turn-helix M1S43_04645 PF00588 SpoU rRNA Methylase family M1S43_04645 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S43_04650 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M1S43_04660 PF00691 OmpA family M1S43_04665 PF07676 WD40-like Beta Propeller Repeat M1S43_04665 PF04052 TolB amino-terminal domain M1S43_04675 PF02472 Biopolymer transport protein ExbD/TolR M1S43_04680 PF01618 MotA/TolQ/ExbB proton channel family M1S43_04685 PF03061 Thioesterase superfamily M1S43_04690 PF07687 Peptidase dimerisation domain M1S43_04690 PF01546 Peptidase family M20/M25/M40 M1S43_04695 PF05496 Holliday junction DNA helicase RuvB P-loop domain M1S43_04695 PF17864 RuvB AAA lid domain M1S43_04695 PF05491 RuvB C-terminal winged helix domain M1S43_04700 PF07499 RuvA, C-terminal domain M1S43_04700 PF01330 RuvA N terminal domain M1S43_04705 PF01966 HD domain M1S43_04710 PF02769 AIR synthase related protein, C-terminal domain M1S43_04710 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M1S43_04710 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M1S43_04715 PF07690 Major Facilitator Superfamily M1S43_04720 PF01784 NIF3 (NGG1p interacting factor 3) M1S43_04725 PF00378 Enoyl-CoA hydratase/isomerase M1S43_04730 PF01467 Cytidylyltransferase-like M1S43_04730 PF00293 NUDIX domain M1S43_04740 PF00578 AhpC/TSA family M1S43_04755 PF06508 Queuosine biosynthesis protein QueC M1S43_04765 PF14602 Hexapeptide repeat of succinyl-transferase M1S43_04765 PF00132 Bacterial transferase hexapeptide (six repeats) M1S43_04765 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M1S43_04775 PF03466 LysR substrate binding domain M1S43_04775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_04780 PF00005 ABC transporter M1S43_04780 PF12857 TOBE-like domain M1S43_04785 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_04790 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_04805 PF01063 Amino-transferase class IV M1S43_04810 PF02618 YceG-like family M1S43_04815 PF02223 Thymidylate kinase M1S43_04825 PF00890 FAD binding domain M1S43_04825 PF02910 Fumarate reductase flavoprotein C-term M1S43_04830 PF13180 PDZ domain M1S43_04840 PF06421 GTP-binding protein LepA C-terminus M1S43_04840 PF00679 Elongation factor G C-terminus M1S43_04840 PF03144 Elongation factor Tu domain 2 M1S43_04840 PF00009 Elongation factor Tu GTP binding domain M1S43_04845 PF10502 Signal peptidase, peptidase S26 M1S43_04855 PF00035 Double-stranded RNA binding motif M1S43_04855 PF14622 Ribonuclease-III-like M1S43_04860 PF07650 KH domain M1S43_04860 PF01926 50S ribosome-binding GTPase M1S43_04870 PF11967 Recombination protein O N terminal M1S43_04870 PF02565 Recombination protein O C terminal M1S43_04875 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M1S43_04880 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M1S43_04885 PF00106 short chain dehydrogenase M1S43_04915 PF00155 Aminotransferase class I and II M1S43_04925 PF00990 Diguanylate cyclase, GGDEF domain M1S43_04925 PF17151 Periplasmic sensor domain M1S43_04935 PF02151 UvrB/uvrC motif M1S43_04935 PF17757 UvrB interaction domain M1S43_04935 PF12344 Ultra-violet resistance protein B M1S43_04935 PF04851 Type III restriction enzyme, res subunit M1S43_04935 PF00271 Helicase conserved C-terminal domain M1S43_04945 PF00892 EamA-like transporter family M1S43_04950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S43_04950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S43_04965 PF01018 GTP1/OBG M1S43_04965 PF01926 50S ribosome-binding GTPase M1S43_04970 PF00696 Amino acid kinase family M1S43_04970 PF01472 PUA domain M1S43_04980 PF07759 Protein of unknown function (DUF1615) M1S43_04985 PF01207 Dihydrouridine synthase (Dus) M1S43_04990 PF03060 Nitronate monooxygenase M1S43_05005 PF02350 UDP-N-acetylglucosamine 2-epimerase M1S43_05035 PF00875 DNA photolyase M1S43_05035 PF03441 FAD binding domain of DNA photolyase M1S43_05040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S43_05045 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_05050 PF00768 D-alanyl-D-alanine carboxypeptidase M1S43_05050 PF07943 Penicillin-binding protein 5, C-terminal domain M1S43_05060 PF03971 Monomeric isocitrate dehydrogenase M1S43_05065 PF00849 RNA pseudouridylate synthase M1S43_05070 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S43_05090 PF06779 Uncharacterised MFS-type transporter YbfB M1S43_05095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_05095 PF03466 LysR substrate binding domain M1S43_05100 PF00375 Sodium:dicarboxylate symporter family M1S43_05105 PF02567 Phenazine biosynthesis-like protein M1S43_05110 PF00675 Insulinase (Peptidase family M16) M1S43_05110 PF05193 Peptidase M16 inactive domain M1S43_05135 PF02581 Thiamine monophosphate synthase M1S43_05140 PF00202 Aminotransferase class-III M1S43_05150 PF00849 RNA pseudouridylate synthase M1S43_05155 PF18339 RapA N-terminal Tudor like domain 1 M1S43_05155 PF18337 RapA N-terminal Tudor like domain M1S43_05155 PF00176 SNF2 family N-terminal domain M1S43_05155 PF12137 RNA polymerase recycling family C-terminal M1S43_05155 PF00271 Helicase conserved C-terminal domain M1S43_05165 PF00440 Bacterial regulatory proteins, tetR family M1S43_05170 PF00970 Oxidoreductase FAD-binding domain M1S43_05170 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S43_05170 PF00175 Oxidoreductase NAD-binding domain M1S43_05175 PF00487 Fatty acid desaturase M1S43_05185 PF17754 MftR C-terminal domain M1S43_05185 PF00440 Bacterial regulatory proteins, tetR family M1S43_05195 PF00202 Aminotransferase class-III M1S43_05200 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S43_05205 PF00171 Aldehyde dehydrogenase family M1S43_05210 PF01037 Lrp/AsnC ligand binding domain M1S43_05215 PF00205 Thiamine pyrophosphate enzyme, central domain M1S43_05215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S43_05215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S43_05220 PF00324 Amino acid permease M1S43_05225 PF12849 PBP superfamily domain M1S43_05230 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_05235 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_05240 PF00005 ABC transporter M1S43_05245 PF08496 Peptidase family S49 N-terminal M1S43_05245 PF01343 Peptidase family S49 M1S43_05260 PF08328 Adenylosuccinate lyase C-terminal M1S43_05260 PF00206 Lyase M1S43_05265 PF04356 Protein of unknown function (DUF489) M1S43_05275 PF00293 NUDIX domain M1S43_05275 PF13344 Haloacid dehalogenase-like hydrolase M1S43_05280 PF00132 Bacterial transferase hexapeptide (six repeats) M1S43_05285 PF07943 Penicillin-binding protein 5, C-terminal domain M1S43_05285 PF00768 D-alanyl-D-alanine carboxypeptidase M1S43_05300 PF01975 Survival protein SurE M1S43_05305 PF01476 LysM domain M1S43_05305 PF01551 Peptidase family M23 M1S43_05310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_05310 PF03466 LysR substrate binding domain M1S43_05315 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S43_05315 PF13654 AAA domain M1S43_05320 PF07690 Major Facilitator Superfamily M1S43_05325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S43_05330 PF13593 SBF-like CPA transporter family (DUF4137) M1S43_05340 PF01197 Ribosomal protein L31 M1S43_05355 PF04055 Radical SAM superfamily M1S43_05360 PF01132 Elongation factor P (EF-P) OB domain M1S43_05360 PF08207 Elongation factor P (EF-P) KOW-like domain M1S43_05360 PF09285 Elongation factor P, C-terminal M1S43_05365 PF02554 Carbon starvation protein CstA M1S43_05365 PF13722 5TM C-terminal transporter carbon starvation CstA M1S43_05370 PF04328 Selenoprotein, putative M1S43_05405 PF17853 GGDEF-like domain M1S43_05405 PF13556 PucR C-terminal helix-turn-helix domain M1S43_05405 PF06018 CodY GAF-like domain M1S43_05420 PF00171 Aldehyde dehydrogenase family M1S43_05425 PF00324 Amino acid permease M1S43_05430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_05430 PF03466 LysR substrate binding domain M1S43_05435 PF02028 BCCT, betaine/carnitine/choline family transporter M1S43_05440 PF02028 BCCT, betaine/carnitine/choline family transporter M1S43_05445 PF00355 Rieske [2Fe-2S] domain M1S43_05445 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S43_05450 PF00171 Aldehyde dehydrogenase family M1S43_05460 PF18113 Rubredoxin binding C-terminal domain M1S43_05460 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_05465 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S43_05465 PF01266 FAD dependent oxidoreductase M1S43_05485 PF00892 EamA-like transporter family M1S43_05495 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M1S43_05500 PF00083 Sugar (and other) transporter M1S43_05505 PF13378 Enolase C-terminal domain-like M1S43_05505 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S43_05510 PF16197 Ketoacyl-synthetase C-terminal extension M1S43_05510 PF00698 Acyl transferase domain M1S43_05510 PF08240 Alcohol dehydrogenase GroES-like domain M1S43_05510 PF08990 Erythronolide synthase docking M1S43_05510 PF09277 Erythronolide synthase, docking M1S43_05510 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S43_05510 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S43_05510 PF08659 KR domain M1S43_05510 PF00550 Phosphopantetheine attachment site M1S43_05510 PF14765 Polyketide synthase dehydratase M1S43_05515 PF00440 Bacterial regulatory proteins, tetR family M1S43_05535 PF02678 Pirin M1S43_05535 PF17954 Quercetinase C-terminal cupin domain M1S43_05545 PF08348 YheO-like PAS domain M1S43_05545 PF13309 HTH domain M1S43_05555 PF00550 Phosphopantetheine attachment site M1S43_05555 PF00668 Condensation domain M1S43_05555 PF13193 AMP-binding enzyme C-terminal domain M1S43_05555 PF00501 AMP-binding enzyme M1S43_05560 PF00975 Thioesterase domain M1S43_05560 PF00550 Phosphopantetheine attachment site M1S43_05560 PF00501 AMP-binding enzyme M1S43_05560 PF13193 AMP-binding enzyme C-terminal domain M1S43_05560 PF00668 Condensation domain M1S43_05565 PF01032 FecCD transport family M1S43_05570 PF01032 FecCD transport family M1S43_05575 PF00005 ABC transporter M1S43_05580 PF01497 Periplasmic binding protein M1S43_05585 PF00593 TonB dependent receptor M1S43_05585 PF07715 TonB-dependent Receptor Plug Domain M1S43_05590 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S43_05600 PF00501 AMP-binding enzyme M1S43_05600 PF13193 AMP-binding enzyme C-terminal domain M1S43_05605 PF00857 Isochorismatase family M1S43_05605 PF00550 Phosphopantetheine attachment site M1S43_05610 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S43_05620 PF00005 ABC transporter M1S43_05625 PF00005 ABC transporter M1S43_05630 PF00975 Thioesterase domain M1S43_05640 PF00425 chorismate binding enzyme M1S43_05650 PF01208 Uroporphyrinogen decarboxylase (URO-D) M1S43_05655 PF05675 Protein of unknown function (DUF817) M1S43_05670 PF00144 Beta-lactamase M1S43_05680 PF01227 GTP cyclohydrolase I M1S43_05685 PF01799 [2Fe-2S] binding domain M1S43_05685 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S43_05690 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M1S43_05690 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M1S43_05705 PF00218 Indole-3-glycerol phosphate synthase M1S43_05710 PF02885 Glycosyl transferase family, helical bundle domain M1S43_05710 PF00591 Glycosyl transferase family, a/b domain M1S43_05715 PF07715 TonB-dependent Receptor Plug Domain M1S43_05715 PF00593 TonB dependent receptor M1S43_05720 PF11838 ERAP1-like C-terminal domain M1S43_05720 PF01433 Peptidase family M1 domain M1S43_05725 PF00117 Glutamine amidotransferase class-I M1S43_05735 PF00854 POT family M1S43_05740 PF00120 Glutamine synthetase, catalytic domain M1S43_05740 PF03951 Glutamine synthetase, beta-Grasp domain M1S43_05745 PF04345 Chorismate lyase M1S43_05750 PF01040 UbiA prenyltransferase family M1S43_05785 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M1S43_05785 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M1S43_05795 PF13180 PDZ domain M1S43_05800 PF01743 Poly A polymerase head domain M1S43_05800 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S43_05805 PF00390 Malic enzyme, N-terminal domain M1S43_05805 PF03949 Malic enzyme, NAD binding domain M1S43_05805 PF01515 Phosphate acetyl/butaryl transferase M1S43_05810 PF00563 EAL domain M1S43_05810 PF00990 Diguanylate cyclase, GGDEF domain M1S43_05810 PF03707 Bacterial signalling protein N terminal repeat M1S43_05815 PF04452 RNA methyltransferase M1S43_05820 PF02219 Methylenetetrahydrofolate reductase M1S43_05825 PF05221 S-adenosyl-L-homocysteine hydrolase M1S43_05825 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M1S43_05840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_05840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_05840 PF09317 Domain of unknown function (DUF1974) M1S43_05845 PF04055 Radical SAM superfamily M1S43_05850 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_05850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S43_05860 PF07690 Major Facilitator Superfamily M1S43_05870 PF00557 Metallopeptidase family M24 M1S43_05875 PF00318 Ribosomal protein S2 M1S43_05880 PF00889 Elongation factor TS M1S43_05890 PF12833 Helix-turn-helix domain M1S43_05910 PF03330 Lytic transglycolase M1S43_05910 PF05036 Sporulation related domain M1S43_05915 PF13406 Transglycosylase SLT domain M1S43_05920 PF01098 Cell cycle protein M1S43_05930 PF14489 QueF-like protein M1S43_05930 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M1S43_05935 PF01061 ABC-2 type transporter M1S43_05940 PF00005 ABC transporter M1S43_05970 PF00464 Serine hydroxymethyltransferase M1S43_05975 PF02321 Outer membrane efflux protein M1S43_05980 PF00873 AcrB/AcrD/AcrF family M1S43_05985 PF13533 Biotin-lipoyl like M1S43_05990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_05990 PF03466 LysR substrate binding domain M1S43_05995 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S43_06000 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_06005 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_06010 PF00005 ABC transporter M1S43_06015 PF00893 Small Multidrug Resistance protein M1S43_06020 PF00037 4Fe-4S binding domain M1S43_06025 PF01136 Peptidase family U32 M1S43_06025 PF16325 Peptidase family U32 C-terminal domain M1S43_06030 PF00155 Aminotransferase class I and II M1S43_06030 PF00392 Bacterial regulatory proteins, gntR family M1S43_06035 PF02567 Phenazine biosynthesis-like protein M1S43_06040 PF00970 Oxidoreductase FAD-binding domain M1S43_06040 PF00175 Oxidoreductase NAD-binding domain M1S43_06045 PF01980 tRNA-methyltransferase O M1S43_06045 PF18389 TrmO C-terminal domain M1S43_06055 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S43_06055 PF00437 Type II/IV secretion system protein M1S43_06065 PF00072 Response regulator receiver domain M1S43_06065 PF00486 Transcriptional regulatory protein, C terminal M1S43_06070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_06070 PF08521 Two-component sensor kinase N-terminal M1S43_06070 PF00512 His Kinase A (phospho-acceptor) domain M1S43_06080 PF00293 NUDIX domain M1S43_06090 PF00912 Transglycosylase M1S43_06090 PF00905 Penicillin binding protein transpeptidase domain M1S43_06090 PF14814 Bifunctional transglycosylase second domain M1S43_06095 PF01513 ATP-NAD kinase M1S43_06100 PF07023 Protein of unknown function (DUF1315) M1S43_06105 PF02885 Glycosyl transferase family, helical bundle domain M1S43_06105 PF00591 Glycosyl transferase family, a/b domain M1S43_06110 PF00375 Sodium:dicarboxylate symporter family M1S43_06115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_06115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_06115 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_06120 PF00756 Putative esterase M1S43_06125 PF01842 ACT domain M1S43_06125 PF01817 Chorismate mutase type II M1S43_06125 PF00800 Prephenate dehydratase M1S43_06130 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S43_06140 PF07687 Peptidase dimerisation domain M1S43_06140 PF01546 Peptidase family M20/M25/M40 M1S43_06145 PF12706 Beta-lactamase superfamily domain M1S43_06155 PF03883 Peroxide stress protein YaaA M1S43_06165 PF05690 Thiazole biosynthesis protein ThiG M1S43_06175 PF04241 Protein of unknown function (DUF423) M1S43_06180 PF00140 Sigma-70 factor, region 1.2 M1S43_06180 PF04545 Sigma-70, region 4 M1S43_06180 PF04542 Sigma-70 region 2 M1S43_06195 PF00313 'Cold-shock' DNA-binding domain M1S43_06200 PF00271 Helicase conserved C-terminal domain M1S43_06200 PF00270 DEAD/DEAH box helicase M1S43_06210 PF00881 Nitroreductase family M1S43_06215 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M1S43_06215 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M1S43_06235 PF01180 Dihydroorotate dehydrogenase M1S43_06240 PF02674 Colicin V production protein M1S43_06260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S43_06260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S43_06265 PF01435 Peptidase family M48 M1S43_06270 PF09424 Yqey-like protein M1S43_06275 PF01165 Ribosomal protein S21 M1S43_06280 PF00814 Glycoprotease family M1S43_06310 PF00069 Protein kinase domain M1S43_06335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_06335 PF03466 LysR substrate binding domain M1S43_06340 PF00202 Aminotransferase class-III M1S43_06345 PF00171 Aldehyde dehydrogenase family M1S43_06350 PF00324 Amino acid permease M1S43_06380 PF04076 Bacterial OB fold (BOF) protein M1S43_06405 PF00561 alpha/beta hydrolase fold M1S43_06410 PF03616 Sodium/glutamate symporter M1S43_06420 PF07729 FCD domain M1S43_06420 PF00392 Bacterial regulatory proteins, gntR family M1S43_06470 PF00083 Sugar (and other) transporter M1S43_06470 PF08946 Osmosensory transporter coiled coil M1S43_06495 PF00155 Aminotransferase class I and II M1S43_06500 PF02080 TrkA-C domain M1S43_06500 PF06826 Predicted Permease Membrane Region M1S43_06510 PF04403 Paraquat-inducible protein A M1S43_06515 PF02470 MlaD protein M1S43_06525 PF01177 Asp/Glu/Hydantoin racemase M1S43_06530 PF00892 EamA-like transporter family M1S43_06535 PF07995 Glucose / Sorbosone dehydrogenase M1S43_06545 PF13610 DDE domain M1S43_06555 PF01636 Phosphotransferase enzyme family M1S43_06560 PF13610 DDE domain M1S43_06575 PF00132 Bacterial transferase hexapeptide (six repeats) M1S43_06585 PF00893 Small Multidrug Resistance protein M1S43_06590 PF00809 Pterin binding enzyme M1S43_06605 PF07091 Ribosomal RNA methyltransferase (FmrO) M1S43_06620 PF12848 ABC transporter M1S43_06620 PF00005 ABC transporter M1S43_06625 PF01636 Phosphotransferase enzyme family M1S43_06635 PF03050 Transposase IS66 family M1S43_06635 PF13005 zinc-finger binding domain of transposase IS66 M1S43_06635 PF13007 Transposase C of IS166 homeodomain M1S43_06635 PF13817 IS66 C-terminal element M1S43_06660 PF13610 DDE domain M1S43_06675 PF00375 Sodium:dicarboxylate symporter family M1S43_06685 PF16123 Hydroxyacylglutathione hydrolase C-terminus M1S43_06685 PF00753 Metallo-beta-lactamase superfamily M1S43_06690 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_06695 PF09383 NIL domain M1S43_06695 PF00005 ABC transporter M1S43_06700 PF03180 NLPA lipoprotein M1S43_06705 PF02844 Phosphoribosylglycinamide synthetase, N domain M1S43_06705 PF02843 Phosphoribosylglycinamide synthetase, C domain M1S43_06705 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M1S43_06710 PF01808 AICARFT/IMPCHase bienzyme M1S43_06710 PF02142 MGS-like domain M1S43_06715 PF02954 Bacterial regulatory protein, Fis family M1S43_06735 PF13932 GidA associated domain M1S43_06735 PF01134 Glucose inhibited division protein A M1S43_06745 PF14403 Circularly permuted ATP-grasp type 2 M1S43_06755 PF08379 Bacterial transglutaminase-like N-terminal region M1S43_06755 PF01841 Transglutaminase-like superfamily M1S43_06765 PF01168 Alanine racemase, N-terminal domain M1S43_06765 PF00842 Alanine racemase, C-terminal domain M1S43_06770 PF03796 DnaB-like helicase C terminal domain M1S43_06770 PF00772 DnaB-like helicase N terminal domain M1S43_06775 PF01281 Ribosomal protein L9, N-terminal domain M1S43_06775 PF03948 Ribosomal protein L9, C-terminal domain M1S43_06780 PF01084 Ribosomal protein S18 M1S43_06785 PF01250 Ribosomal protein S6 M1S43_06790 PF01040 UbiA prenyltransferase family M1S43_06795 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M1S43_06800 PF00510 Cytochrome c oxidase subunit III M1S43_06805 PF00115 Cytochrome C and Quinol oxidase polypeptide I M1S43_06810 PF06481 COX Aromatic Rich Motif M1S43_06810 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M1S43_06820 PF00391 PEP-utilising enzyme, mobile domain M1S43_06820 PF02896 PEP-utilising enzyme, TIM barrel domain M1S43_06820 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M1S43_06825 PF03618 Kinase/pyrophosphorylase M1S43_06835 PF14883 Hypothetical glycosyl hydrolase family 13 M1S43_06835 PF01522 Polysaccharide deacetylase M1S43_06840 PF00535 Glycosyl transferase family 2 M1S43_06845 PF13994 PgaD-like protein M1S43_06855 PF00296 Luciferase-like monooxygenase M1S43_06870 PF03466 LysR substrate binding domain M1S43_06870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_06880 PF03462 PCRF domain M1S43_06880 PF00472 RF-1 domain M1S43_06885 PF17827 PrmC N-terminal domain M1S43_06885 PF13847 Methyltransferase domain M1S43_06890 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_06895 PF09084 NMT1/THI5 like M1S43_06900 PF12833 Helix-turn-helix domain M1S43_06905 PF00106 short chain dehydrogenase M1S43_06910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_06910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_06910 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_06915 PF00501 AMP-binding enzyme M1S43_06915 PF13193 AMP-binding enzyme C-terminal domain M1S43_06920 PF01613 Flavin reductase like domain M1S43_06925 PF00899 ThiF family M1S43_06930 PF03109 ABC1 family M1S43_06945 PF03814 Potassium-transporting ATPase A subunit M1S43_06955 PF02669 K+-transporting ATPase, c chain M1S43_06960 PF13493 Domain of unknown function (DUF4118) M1S43_06960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_06960 PF00512 His Kinase A (phospho-acceptor) domain M1S43_06960 PF02702 Osmosensitive K+ channel His kinase sensor domain M1S43_06965 PF00072 Response regulator receiver domain M1S43_06965 PF00486 Transcriptional regulatory protein, C terminal M1S43_06970 PF00120 Glutamine synthetase, catalytic domain M1S43_06980 PF03232 Ubiquinone biosynthesis protein COQ7 M1S43_06985 PF07690 Major Facilitator Superfamily M1S43_06990 PF01103 Surface antigen M1S43_06990 PF07244 Surface antigen variable number repeat M1S43_06990 PF17243 POTRA domain TamA domain 1 M1S43_07005 PF11791 Aconitate B N-terminal domain M1S43_07005 PF00330 Aconitase family (aconitate hydratase) M1S43_07005 PF06434 Aconitate hydratase 2 N-terminus M1S43_07015 PF00520 Ion transport protein M1S43_07015 PF00027 Cyclic nucleotide-binding domain M1S43_07020 PF07690 Major Facilitator Superfamily M1S43_07035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_07035 PF03466 LysR substrate binding domain M1S43_07040 PF04284 Protein of unknown function (DUF441) M1S43_07050 PF00849 RNA pseudouridylate synthase M1S43_07050 PF01479 S4 domain M1S43_07065 PF01479 S4 domain M1S43_07065 PF00849 RNA pseudouridylate synthase M1S43_07070 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M1S43_07075 PF08676 MutL C terminal dimerisation domain M1S43_07075 PF01119 DNA mismatch repair protein, C-terminal domain M1S43_07085 PF17209 Hfq protein M1S43_07095 PF00881 Nitroreductase family M1S43_07105 PF00149 Calcineurin-like phosphoesterase M1S43_07110 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S43_07115 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M1S43_07115 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S43_07120 PF02540 NAD synthase M1S43_07120 PF00958 GMP synthase C terminal domain M1S43_07120 PF00117 Glutamine amidotransferase class-I M1S43_07125 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M1S43_07130 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M1S43_07135 PF13520 Amino acid permease M1S43_07140 PF00171 Aldehyde dehydrogenase family M1S43_07155 PF00465 Iron-containing alcohol dehydrogenase M1S43_07160 PF05970 PIF1-like helicase M1S43_07160 PF14493 Helix-turn-helix domain M1S43_07170 PF06445 GyrI-like small molecule binding domain M1S43_07175 PF02110 Hydroxyethylthiazole kinase family M1S43_07190 PF01433 Peptidase family M1 domain M1S43_07190 PF11940 Domain of unknown function (DUF3458) Ig-like fold M1S43_07190 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M1S43_07200 PF00106 short chain dehydrogenase M1S43_07210 PF01817 Chorismate mutase type II M1S43_07215 PF01037 Lrp/AsnC ligand binding domain M1S43_07230 PF00440 Bacterial regulatory proteins, tetR family M1S43_07235 PF07715 TonB-dependent Receptor Plug Domain M1S43_07235 PF00593 TonB dependent receptor M1S43_07240 PF00924 Mechanosensitive ion channel M1S43_07285 PF07715 TonB-dependent Receptor Plug Domain M1S43_07285 PF00593 TonB dependent receptor M1S43_07305 PF00005 ABC transporter M1S43_07305 PF12848 ABC transporter M1S43_07310 PF00582 Universal stress protein family M1S43_07335 PF00690 Cation transporter/ATPase, N-terminus M1S43_07335 PF00689 Cation transporting ATPase, C-terminus M1S43_07340 PF02308 MgtC family M1S43_07345 PF03594 Benzoate membrane transport protein M1S43_07350 PF01037 Lrp/AsnC ligand binding domain M1S43_07355 PF01810 LysE type translocator M1S43_07360 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1S43_07365 PF03466 LysR substrate binding domain M1S43_07365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_07375 PF02803 Thiolase, C-terminal domain M1S43_07375 PF00108 Thiolase, N-terminal domain M1S43_07385 PF01575 MaoC like domain M1S43_07390 PF00144 Beta-lactamase M1S43_07400 PF07690 Major Facilitator Superfamily M1S43_07405 PF12169 DNA polymerase III subunits gamma and tau domain III M1S43_07405 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M1S43_07405 PF12170 DNA polymerase III tau subunit V interacting with alpha M1S43_07410 PF05506 Domain of unknown function (DUF756) M1S43_07410 PF04185 Phosphoesterase family M1S43_07415 PF03061 Thioesterase superfamily M1S43_07420 PF00465 Iron-containing alcohol dehydrogenase M1S43_07450 PF01645 Conserved region in glutamate synthase M1S43_07555 PF01555 DNA methylase M1S43_07745 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system M1S43_07850 PF12832 MFS_1 like family M1S43_07860 PF02785 Biotin carboxylase C-terminal domain M1S43_07860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S43_07860 PF00289 Biotin carboxylase, N-terminal domain M1S43_07865 PF00364 Biotin-requiring enzyme M1S43_07870 PF01220 Dehydroquinase class II M1S43_07875 PF11799 impB/mucB/samB family C-terminal domain M1S43_07875 PF00817 impB/mucB/samB family M1S43_07875 PF13438 Domain of unknown function (DUF4113) M1S43_07885 PF00005 ABC transporter M1S43_07890 PF00486 Transcriptional regulatory protein, C terminal M1S43_07890 PF00072 Response regulator receiver domain M1S43_07900 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S43_07900 PF04324 BFD-like [2Fe-2S] binding domain M1S43_07900 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_07900 PF13806 Rieske-like [2Fe-2S] domain M1S43_07900 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S43_07900 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S43_07905 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_07905 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S43_07905 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S43_07905 PF04324 BFD-like [2Fe-2S] binding domain M1S43_07905 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S43_07910 PF04324 BFD-like [2Fe-2S] binding domain M1S43_07910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S43_07910 PF00384 Molybdopterin oxidoreductase M1S43_07910 PF01568 Molydopterin dinucleotide binding domain M1S43_07915 PF12804 MobA-like NTP transferase domain M1S43_07920 PF00384 Molybdopterin oxidoreductase M1S43_07920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S43_07920 PF01568 Molydopterin dinucleotide binding domain M1S43_07925 PF04055 Radical SAM superfamily M1S43_07925 PF06463 Molybdenum Cofactor Synthesis C M1S43_07935 PF02391 MoaE protein M1S43_07940 PF00994 Probable molybdopterin binding domain M1S43_07940 PF01967 MoaC family M1S43_07945 PF00994 Probable molybdopterin binding domain M1S43_07945 PF03453 MoeA N-terminal region (domain I and II) M1S43_07945 PF03454 MoeA C-terminal region (domain IV) M1S43_07950 PF01638 HxlR-like helix-turn-helix M1S43_07955 PF00392 Bacterial regulatory proteins, gntR family M1S43_07955 PF00155 Aminotransferase class I and II M1S43_07960 PF00892 EamA-like transporter family M1S43_07980 PF02635 DsrE/DsrF-like family M1S43_07985 PF16363 GDP-mannose 4,6 dehydratase M1S43_07990 PF10415 Fumarase C C-terminus M1S43_07990 PF00206 Lyase M1S43_08010 PF01266 FAD dependent oxidoreductase M1S43_08020 PF02542 YgbB family M1S43_08030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S43_08030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S43_08035 PF00440 Bacterial regulatory proteins, tetR family M1S43_08040 PF02954 Bacterial regulatory protein, Fis family M1S43_08040 PF00072 Response regulator receiver domain M1S43_08040 PF00158 Sigma-54 interaction domain M1S43_08045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_08045 PF00512 His Kinase A (phospho-acceptor) domain M1S43_08045 PF00989 PAS fold M1S43_08050 PF04055 Radical SAM superfamily M1S43_08050 PF18693 TRAM domain M1S43_08050 PF00919 Uncharacterized protein family UPF0004 M1S43_08055 PF00696 Amino acid kinase family M1S43_08060 PF01765 Ribosome recycling factor M1S43_08065 PF01255 Putative undecaprenyl diphosphate synthase M1S43_08075 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M1S43_08075 PF13288 DXP reductoisomerase C-terminal domain M1S43_08075 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M1S43_08080 PF17820 PDZ domain M1S43_08080 PF13180 PDZ domain M1S43_08080 PF02163 Peptidase family M50 M1S43_08085 PF07244 Surface antigen variable number repeat M1S43_08085 PF01103 Surface antigen M1S43_08095 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M1S43_08095 PF00132 Bacterial transferase hexapeptide (six repeats) M1S43_08100 PF07977 FabA-like domain M1S43_08105 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M1S43_08105 PF00132 Bacterial transferase hexapeptide (six repeats) M1S43_08120 PF02631 RecX family M1S43_08125 PF00154 recA bacterial DNA recombination protein M1S43_08130 PF01479 S4 domain M1S43_08135 PF13419 Haloacid dehalogenase-like hydrolase M1S43_08160 PF01037 Lrp/AsnC ligand binding domain M1S43_08165 PF00266 Aminotransferase class-V M1S43_08170 PF00324 Amino acid permease M1S43_08185 PF05922 Peptidase inhibitor I9 M1S43_08185 PF00082 Subtilase family M1S43_08190 PF01740 STAS domain M1S43_08190 PF00916 Sulfate permease family M1S43_08195 PF02586 SOS response associated peptidase (SRAP) M1S43_08200 PF07995 Glucose / Sorbosone dehydrogenase M1S43_08210 PF03707 Bacterial signalling protein N terminal repeat M1S43_08210 PF00990 Diguanylate cyclase, GGDEF domain M1S43_08210 PF00563 EAL domain M1S43_08230 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M1S43_08230 PF02378 Phosphotransferase system, EIIC M1S43_08235 PF00294 pfkB family carbohydrate kinase M1S43_08240 PF05524 PEP-utilising enzyme, N-terminal M1S43_08240 PF00381 PTS HPr component phosphorylation site M1S43_08240 PF02896 PEP-utilising enzyme, TIM barrel domain M1S43_08240 PF00391 PEP-utilising enzyme, mobile domain M1S43_08240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M1S43_08265 PF05525 Branched-chain amino acid transport protein M1S43_08270 PF00557 Metallopeptidase family M24 M1S43_08275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_08275 PF03466 LysR substrate binding domain M1S43_08285 PF00462 Glutaredoxin M1S43_08290 PF00202 Aminotransferase class-III M1S43_08295 PF00478 IMP dehydrogenase / GMP reductase domain M1S43_08295 PF00571 CBS domain M1S43_08320 PF02881 SRP54-type protein, helical bundle domain M1S43_08320 PF00448 SRP54-type protein, GTPase domain M1S43_08330 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M1S43_08345 PF08173 Membrane bound YbgT-like protein M1S43_08350 PF02322 Cytochrome bd terminal oxidase subunit II M1S43_08355 PF01654 Cytochrome bd terminal oxidase subunit I M1S43_08365 PF07290 Protein of unknown function (DUF1449) M1S43_08375 PF00294 pfkB family carbohydrate kinase M1S43_08380 PF00593 TonB dependent receptor M1S43_08380 PF07715 TonB-dependent Receptor Plug Domain M1S43_08385 PF08367 Peptidase M16C associated M1S43_08385 PF00675 Insulinase (Peptidase family M16) M1S43_08385 PF05193 Peptidase M16 inactive domain M1S43_08390 PF02253 Phospholipase A1 M1S43_08395 PF02386 Cation transport protein M1S43_08400 PF02254 TrkA-N domain M1S43_08400 PF02080 TrkA-C domain M1S43_08405 PF00291 Pyridoxal-phosphate dependent enzyme M1S43_08405 PF00585 C-terminal regulatory domain of Threonine dehydratase M1S43_08410 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M1S43_08425 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S43_08425 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S43_08435 PF02617 ATP-dependent Clp protease adaptor protein ClpS M1S43_08440 PF07724 AAA domain (Cdc48 subfamily) M1S43_08440 PF00004 ATPase family associated with various cellular activities (AAA) M1S43_08440 PF10431 C-terminal, D2-small domain, of ClpB protein M1S43_08440 PF02861 Clp amino terminal domain, pathogenicity island component M1S43_08440 PF17871 AAA lid domain M1S43_08445 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M1S43_08450 PF00793 DAHP synthetase I family M1S43_08465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S43_08465 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_08495 PF06418 CTP synthase N-terminus M1S43_08495 PF00117 Glutamine amidotransferase class-I M1S43_08500 PF00793 DAHP synthetase I family M1S43_08505 PF03952 Enolase, N-terminal domain M1S43_08505 PF00113 Enolase, C-terminal TIM barrel domain M1S43_08510 PF04239 Protein of unknown function (DUF421) M1S43_08515 PF04977 Septum formation initiator M1S43_08520 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M1S43_08525 PF01144 Coenzyme A transferase M1S43_08530 PF01144 Coenzyme A transferase M1S43_08535 PF00108 Thiolase, N-terminal domain M1S43_08535 PF02803 Thiolase, C-terminal domain M1S43_08540 PF10397 Adenylosuccinate lyase C-terminus M1S43_08540 PF00206 Lyase M1S43_08545 PF00561 alpha/beta hydrolase fold M1S43_08550 PF07690 Major Facilitator Superfamily M1S43_08555 PF02627 Carboxymuconolactone decarboxylase family M1S43_08560 PF00775 Dioxygenase M1S43_08560 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M1S43_08565 PF00775 Dioxygenase M1S43_08570 PF01487 Type I 3-dehydroquinase M1S43_08575 PF05048 Periplasmic copper-binding protein (NosD) M1S43_08580 PF04966 Carbohydrate-selective porin, OprB family M1S43_08585 PF13360 PQQ-like domain M1S43_08585 PF01011 PQQ enzyme repeat M1S43_08600 PF04143 Sulphur transport M1S43_08610 PF00753 Metallo-beta-lactamase superfamily M1S43_08615 PF01614 Bacterial transcriptional regulator M1S43_08615 PF09339 IclR helix-turn-helix domain M1S43_08620 PF03466 LysR substrate binding domain M1S43_08620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_08625 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_08625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_08625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_08640 PF00106 short chain dehydrogenase M1S43_08650 PF07690 Major Facilitator Superfamily M1S43_08660 PF01425 Amidase M1S43_08665 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S43_08680 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S43_08680 PF00355 Rieske [2Fe-2S] domain M1S43_08695 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S43_08695 PF00175 Oxidoreductase NAD-binding domain M1S43_08700 PF01613 Flavin reductase like domain M1S43_08705 PF02311 AraC-like ligand binding domain M1S43_08705 PF12833 Helix-turn-helix domain M1S43_08710 PF01179 Copper amine oxidase, enzyme domain M1S43_08710 PF07833 Copper amine oxidase N-terminal domain M1S43_08710 PF02727 Copper amine oxidase, N2 domain M1S43_08710 PF02728 Copper amine oxidase, N3 domain M1S43_08720 PF00171 Aldehyde dehydrogenase family M1S43_08725 PF01804 Penicillin amidase M1S43_08730 PF12146 Serine aminopeptidase, S33 M1S43_08735 PF00108 Thiolase, N-terminal domain M1S43_08735 PF02803 Thiolase, C-terminal domain M1S43_08740 PF01144 Coenzyme A transferase M1S43_08745 PF01144 Coenzyme A transferase M1S43_08750 PF00775 Dioxygenase M1S43_08750 PF04444 Catechol dioxygenase N terminus M1S43_08755 PF02426 Muconolactone delta-isomerase M1S43_08760 PF13378 Enolase C-terminal domain-like M1S43_08760 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S43_08765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_08765 PF03466 LysR substrate binding domain M1S43_08775 PF07729 FCD domain M1S43_08775 PF00392 Bacterial regulatory proteins, gntR family M1S43_08780 PF00920 Dehydratase family M1S43_08785 PF07690 Major Facilitator Superfamily M1S43_08795 PF00171 Aldehyde dehydrogenase family M1S43_08815 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_08815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_08815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_08825 PF06506 Propionate catabolism activator M1S43_08825 PF02954 Bacterial regulatory protein, Fis family M1S43_08825 PF00158 Sigma-54 interaction domain M1S43_08830 PF00501 AMP-binding enzyme M1S43_08830 PF13193 AMP-binding enzyme C-terminal domain M1S43_08835 PF04341 Protein of unknown function, DUF485 M1S43_08840 PF00474 Sodium:solute symporter family M1S43_08845 PF08240 Alcohol dehydrogenase GroES-like domain M1S43_08845 PF00107 Zinc-binding dehydrogenase M1S43_08850 PF00171 Aldehyde dehydrogenase family M1S43_08860 PF00561 alpha/beta hydrolase fold M1S43_08865 PF00199 Catalase M1S43_08865 PF06628 Catalase-related immune-responsive M1S43_08880 PF07859 alpha/beta hydrolase fold M1S43_08885 PF01047 MarR family M1S43_08890 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_08890 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S43_08895 PF00106 short chain dehydrogenase M1S43_08900 PF01872 RibD C-terminal domain M1S43_08905 PF00376 MerR family regulatory protein M1S43_08905 PF09278 MerR, DNA binding M1S43_08915 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_08925 PF12706 Beta-lactamase superfamily domain M1S43_08930 PF00440 Bacterial regulatory proteins, tetR family M1S43_08930 PF08359 YsiA-like protein, C-terminal region M1S43_08940 PF00857 Isochorismatase family M1S43_08945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_08945 PF03466 LysR substrate binding domain M1S43_08950 PF07995 Glucose / Sorbosone dehydrogenase M1S43_08955 PF00999 Sodium/hydrogen exchanger family M1S43_08955 PF02254 TrkA-N domain M1S43_08965 PF01546 Peptidase family M20/M25/M40 M1S43_08965 PF07687 Peptidase dimerisation domain M1S43_08975 PF08479 POTRA domain, ShlB-type M1S43_08975 PF17287 POTRA domain M1S43_08975 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M1S43_08980 PF13018 Extended Signal Peptide of Type V secretion system M1S43_08980 PF13332 Hemagglutinin repeat M1S43_08980 PF05860 haemagglutination activity domain M1S43_08980 PF04829 Pre-toxin domain with VENN motif M1S43_08995 PF07690 Major Facilitator Superfamily M1S43_09000 PF04909 Amidohydrolase M1S43_09010 PF00392 Bacterial regulatory proteins, gntR family M1S43_09010 PF07702 UTRA domain M1S43_09015 PF08450 SMP-30/Gluconolactonase/LRE-like region M1S43_09025 PF03466 LysR substrate binding domain M1S43_09025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_09045 PF07690 Major Facilitator Superfamily M1S43_09050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S43_09050 PF01842 ACT domain M1S43_09050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S43_09055 PF03737 Aldolase/RraA M1S43_09085 PF00529 HlyD membrane-fusion protein of T1SS M1S43_09085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S43_09100 PF00171 Aldehyde dehydrogenase family M1S43_09105 PF00920 Dehydratase family M1S43_09115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_09115 PF03466 LysR substrate binding domain M1S43_09120 PF01370 NAD dependent epimerase/dehydratase family M1S43_09125 PF07690 Major Facilitator Superfamily M1S43_09130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S43_09130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S43_09135 PF06719 AraC-type transcriptional regulator N-terminus M1S43_09135 PF12833 Helix-turn-helix domain M1S43_09150 PF08240 Alcohol dehydrogenase GroES-like domain M1S43_09150 PF00107 Zinc-binding dehydrogenase M1S43_09160 PF01032 FecCD transport family M1S43_09165 PF00005 ABC transporter M1S43_09185 PF14572 Phosphoribosyl synthetase-associated domain M1S43_09185 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S43_09190 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S43_09265 PF00196 Bacterial regulatory proteins, luxR family M1S43_09270 PF01425 Amidase M1S43_09275 PF13533 Biotin-lipoyl like M1S43_09280 PF07690 Major Facilitator Superfamily M1S43_09305 PF01975 Survival protein SurE M1S43_09315 PF13291 ACT domain M1S43_09315 PF04607 Region found in RelA / SpoT proteins M1S43_09315 PF02824 TGS domain M1S43_09365 PF12146 Serine aminopeptidase, S33 M1S43_09370 PF12833 Helix-turn-helix domain M1S43_09370 PF02311 AraC-like ligand binding domain M1S43_09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_09380 PF00512 His Kinase A (phospho-acceptor) domain M1S43_09380 PF00672 HAMP domain M1S43_09380 PF16527 Two-component sensor protein CpxA, periplasmic domain M1S43_09385 PF00486 Transcriptional regulatory protein, C terminal M1S43_09385 PF00072 Response regulator receiver domain M1S43_09390 PF00529 HlyD membrane-fusion protein of T1SS M1S43_09390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S43_09395 PF00873 AcrB/AcrD/AcrF family M1S43_09400 PF02321 Outer membrane efflux protein M1S43_09405 PF12146 Serine aminopeptidase, S33 M1S43_09410 PF00743 Flavin-binding monooxygenase-like M1S43_09415 PF01593 Flavin containing amine oxidoreductase M1S43_09430 PF01266 FAD dependent oxidoreductase M1S43_09450 PF16970 Type-1 fimbrial protein, A M1S43_09460 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S43_09460 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S43_09465 PF13954 PapC N-terminal domain M1S43_09465 PF00577 Outer membrane usher protein M1S43_09465 PF13953 PapC C-terminal domain M1S43_09470 PF00419 Fimbrial protein M1S43_09480 PF00107 Zinc-binding dehydrogenase M1S43_09480 PF08240 Alcohol dehydrogenase GroES-like domain M1S43_09490 PF00199 Catalase M1S43_09505 PF13091 PLD-like domain M1S43_09520 PF01244 Membrane dipeptidase (Peptidase family M19) M1S43_09525 PF13186 Iron-sulfur cluster-binding domain M1S43_09525 PF04055 Radical SAM superfamily M1S43_09530 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M1S43_09535 PF03070 TENA/THI-4/PQQC family M1S43_09540 PF12706 Beta-lactamase superfamily domain M1S43_09545 PF08042 PqqA family M1S43_09550 PF02503 Polyphosphate kinase middle domain M1S43_09550 PF13089 Polyphosphate kinase N-terminal domain M1S43_09550 PF13090 Polyphosphate kinase C-terminal domain 2 M1S43_09550 PF17941 Polyphosphate kinase C-terminal domain 1 M1S43_09555 PF00149 Calcineurin-like phosphoesterase M1S43_09565 PF00550 Phosphopantetheine attachment site M1S43_09565 PF00857 Isochorismatase family M1S43_09570 PF00106 short chain dehydrogenase M1S43_09575 PF00005 ABC transporter M1S43_09575 PF03459 TOBE domain M1S43_09580 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_09590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_09590 PF03459 TOBE domain M1S43_09595 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S43_09595 PF00355 Rieske [2Fe-2S] domain M1S43_09600 PF00866 Ring hydroxylating beta subunit M1S43_09605 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S43_09605 PF00175 Oxidoreductase NAD-binding domain M1S43_09605 PF00970 Oxidoreductase FAD-binding domain M1S43_09610 PF12833 Helix-turn-helix domain M1S43_09610 PF14525 AraC-binding-like domain M1S43_09620 PF01613 Flavin reductase like domain M1S43_09635 PF01738 Dienelactone hydrolase family M1S43_09640 PF07690 Major Facilitator Superfamily M1S43_09645 PF12833 Helix-turn-helix domain M1S43_09645 PF06719 AraC-type transcriptional regulator N-terminus M1S43_09670 PF03466 LysR substrate binding domain M1S43_09670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_09675 PF01144 Coenzyme A transferase M1S43_09680 PF01144 Coenzyme A transferase M1S43_09685 PF02667 Short chain fatty acid transporter M1S43_09690 PF00108 Thiolase, N-terminal domain M1S43_09690 PF02803 Thiolase, C-terminal domain M1S43_09695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_09695 PF03466 LysR substrate binding domain M1S43_09700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_09700 PF03466 LysR substrate binding domain M1S43_09715 PF10415 Fumarase C C-terminus M1S43_09715 PF00206 Lyase M1S43_09720 PF07715 TonB-dependent Receptor Plug Domain M1S43_09720 PF00593 TonB dependent receptor M1S43_09725 PF00083 Sugar (and other) transporter M1S43_09740 PF00005 ABC transporter M1S43_09745 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_09750 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S43_09765 PF00392 Bacterial regulatory proteins, gntR family M1S43_09765 PF07702 UTRA domain M1S43_09775 PF02525 Flavodoxin-like fold M1S43_09780 PF01638 HxlR-like helix-turn-helix M1S43_09785 PF12833 Helix-turn-helix domain M1S43_09785 PF06445 GyrI-like small molecule binding domain M1S43_09800 PF01925 Sulfite exporter TauE/SafE M1S43_09815 PF04273 Putative phosphatase (DUF442) M1S43_09815 PF00753 Metallo-beta-lactamase superfamily M1S43_09820 PF02954 Bacterial regulatory protein, Fis family M1S43_09820 PF00072 Response regulator receiver domain M1S43_09820 PF00158 Sigma-54 interaction domain M1S43_09825 PF01062 Bestrophin, RFP-TM, chloride channel M1S43_09830 PF08240 Alcohol dehydrogenase GroES-like domain M1S43_09830 PF00107 Zinc-binding dehydrogenase M1S43_09835 PF00106 short chain dehydrogenase M1S43_09840 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_09840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S43_09845 PF02817 e3 binding domain M1S43_09845 PF00364 Biotin-requiring enzyme M1S43_09845 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S43_09850 PF02780 Transketolase, C-terminal domain M1S43_09850 PF02779 Transketolase, pyrimidine binding domain M1S43_09855 PF00676 Dehydrogenase E1 component M1S43_09860 PF04055 Radical SAM superfamily M1S43_09875 PF08448 PAS fold M1S43_09875 PF00990 Diguanylate cyclase, GGDEF domain M1S43_09880 PF01264 Chorismate synthase M1S43_09885 PF05175 Methyltransferase small domain M1S43_09890 PF00291 Pyridoxal-phosphate dependent enzyme M1S43_09900 PF00004 ATPase family associated with various cellular activities (AAA) M1S43_09900 PF17862 AAA+ lid domain M1S43_09900 PF01434 Peptidase family M41 M1S43_09910 PF05166 YcgL domain M1S43_09930 PF00570 HRDC domain M1S43_09930 PF01612 3'-5' exonuclease M1S43_09935 PF02132 RecR protein M1S43_09935 PF13662 Toprim domain M1S43_09940 PF02575 YbaB/EbfC DNA-binding family M1S43_09950 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S43_09955 PF00561 alpha/beta hydrolase fold M1S43_09960 PF08241 Methyltransferase domain M1S43_09990 PF01230 HIT domain M1S43_10025 PF00005 ABC transporter M1S43_10030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S43_10040 PF02684 Lipid-A-disaccharide synthetase M1S43_10045 PF00593 TonB dependent receptor M1S43_10045 PF07715 TonB-dependent Receptor Plug Domain M1S43_10065 PF01925 Sulfite exporter TauE/SafE M1S43_10070 PF00793 DAHP synthetase I family M1S43_10075 PF02654 Cobalamin-5-phosphate synthase M1S43_10090 PF02277 Phosphoribosyltransferase M1S43_10095 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M1S43_10105 PF13419 Haloacid dehalogenase-like hydrolase M1S43_10130 PF00593 TonB dependent receptor M1S43_10130 PF07715 TonB-dependent Receptor Plug Domain M1S43_10145 PF04183 IucA / IucC family M1S43_10145 PF06276 Ferric iron reductase FhuF-like transporter M1S43_10150 PF06276 Ferric iron reductase FhuF-like transporter M1S43_10150 PF04183 IucA / IucC family M1S43_10155 PF07690 Major Facilitator Superfamily M1S43_10160 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S43_10165 PF06276 Ferric iron reductase FhuF-like transporter M1S43_10165 PF04183 IucA / IucC family M1S43_10170 PF04073 Aminoacyl-tRNA editing domain M1S43_10180 PF03109 ABC1 family M1S43_10185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_10185 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_10185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_10190 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_10190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_10190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_10195 PF00487 Fatty acid desaturase M1S43_10200 PF12852 Cupin M1S43_10200 PF12833 Helix-turn-helix domain M1S43_10205 PF00639 PPIC-type PPIASE domain M1S43_10205 PF09312 SurA N-terminal domain M1S43_10210 PF00216 Bacterial DNA-binding protein M1S43_10225 PF02082 Transcriptional regulator M1S43_10230 PF00266 Aminotransferase class-V M1S43_10235 PF01592 NifU-like N terminal domain M1S43_10240 PF01521 Iron-sulphur cluster biosynthesis M1S43_10245 PF07743 HSCB C-terminal oligomerisation domain M1S43_10245 PF00226 DnaJ domain M1S43_10250 PF00012 Hsp70 protein M1S43_10255 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S43_10260 PF00211 Adenylate and Guanylate cyclase catalytic domain M1S43_10270 PF02559 CarD-like/TRCF domain M1S43_10270 PF00270 DEAD/DEAH box helicase M1S43_10270 PF00271 Helicase conserved C-terminal domain M1S43_10270 PF03461 TRCF domain M1S43_10270 PF17757 UvrB interaction domain M1S43_10290 PF03737 Aldolase/RraA M1S43_10295 PF13460 NAD(P)H-binding M1S43_10300 PF01649 Ribosomal protein S20 M1S43_10310 PF00459 Inositol monophosphatase family M1S43_10325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S43_10325 PF00005 ABC transporter M1S43_10330 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_10335 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_10340 PF01432 Peptidase family M3 M1S43_10360 PF00593 TonB dependent receptor M1S43_10360 PF07715 TonB-dependent Receptor Plug Domain M1S43_10370 PF01618 MotA/TolQ/ExbB proton channel family M1S43_10375 PF02472 Biopolymer transport protein ExbD/TolR M1S43_10380 PF02472 Biopolymer transport protein ExbD/TolR M1S43_10390 PF01274 Malate synthase M1S43_10395 PF03969 AFG1-like ATPase M1S43_10405 PF00743 Flavin-binding monooxygenase-like M1S43_10415 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M1S43_10425 PF00216 Bacterial DNA-binding protein M1S43_10430 PF00575 S1 RNA binding domain M1S43_10435 PF02224 Cytidylate kinase M1S43_10445 PF14437 MafB19-like deaminase M1S43_10455 PF03167 Uracil DNA glycosylase superfamily M1S43_10465 PF03934 Type II secretion system (T2SS), protein K M1S43_10470 PF07963 Prokaryotic N-terminal methylation motif M1S43_10470 PF11612 Type II secretion system (T2SS), protein J M1S43_10475 PF07963 Prokaryotic N-terminal methylation motif M1S43_10475 PF02501 Type II secretion system (T2SS), protein I M1S43_10490 PF01026 TatD related DNase M1S43_10500 PF09115 DNA polymerase III, delta subunit, C terminal M1S43_10505 PF02348 Cytidylyltransferase M1S43_10510 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M1S43_10515 PF00005 ABC transporter M1S43_10515 PF00664 ABC transporter transmembrane region M1S43_10525 PF01618 MotA/TolQ/ExbB proton channel family M1S43_10530 PF17762 HTH domain found in ParB protein M1S43_10530 PF02195 ParB-like nuclease domain M1S43_10535 PF13614 AAA domain M1S43_10540 PF02527 rRNA small subunit methyltransferase G M1S43_10545 PF00483 Nucleotidyl transferase M1S43_10550 PF01636 Phosphotransferase enzyme family M1S43_10555 PF04453 LPS transport system D M1S43_10555 PF03968 OstA-like protein M1S43_10560 PF00639 PPIC-type PPIASE domain M1S43_10560 PF09312 SurA N-terminal domain M1S43_10565 PF01116 Fructose-bisphosphate aldolase class-II M1S43_10575 PF00162 Phosphoglycerate kinase M1S43_10585 PF02545 Maf-like protein M1S43_10590 PF08007 Cupin superfamily protein M1S43_10605 PF00375 Sodium:dicarboxylate symporter family M1S43_10610 PF06912 Protein of unknown function (DUF1275) M1S43_10615 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M1S43_10620 PF00664 ABC transporter transmembrane region M1S43_10620 PF00005 ABC transporter M1S43_10630 PF12833 Helix-turn-helix domain M1S43_10630 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S43_10635 PF01597 Glycine cleavage H-protein M1S43_10640 PF02146 Sir2 family M1S43_10645 PF00474 Sodium:solute symporter family M1S43_10650 PF01037 Lrp/AsnC ligand binding domain M1S43_10655 PF14850 DNA-binding domain of Proline dehydrogenase M1S43_10655 PF00171 Aldehyde dehydrogenase family M1S43_10655 PF01619 Proline dehydrogenase M1S43_10655 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M1S43_10660 PF04229 GrpB protein M1S43_10665 PF05958 tRNA (Uracil-5-)-methyltransferase M1S43_10675 PF09992 Phosphodiester glycosidase M1S43_10685 PF04264 YceI-like domain M1S43_10695 PF02780 Transketolase, C-terminal domain M1S43_10695 PF02779 Transketolase, pyrimidine binding domain M1S43_10695 PF00456 Transketolase, thiamine diphosphate binding domain M1S43_10700 PF02773 S-adenosylmethionine synthetase, C-terminal domain M1S43_10700 PF02772 S-adenosylmethionine synthetase, central domain M1S43_10700 PF00438 S-adenosylmethionine synthetase, N-terminal domain M1S43_10720 PF00905 Penicillin binding protein transpeptidase domain M1S43_10735 PF02075 Crossover junction endodeoxyribonuclease RuvC M1S43_10740 PF01256 Carbohydrate kinase M1S43_10740 PF03853 YjeF-related protein N-terminus M1S43_10745 PF08331 Domain of unknown function (DUF1730) M1S43_10750 PF06968 Biotin and Thiamin Synthesis associated domain M1S43_10750 PF04055 Radical SAM superfamily M1S43_10765 PF16970 Type-1 fimbrial protein, A M1S43_10770 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S43_10770 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S43_10795 PF00892 EamA-like transporter family M1S43_10805 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S43_10815 PF03466 LysR substrate binding domain M1S43_10815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_10835 PF00440 Bacterial regulatory proteins, tetR family M1S43_10845 PF01709 Transcriptional regulator M1S43_10850 PF01037 Lrp/AsnC ligand binding domain M1S43_10860 PF00005 ABC transporter M1S43_10865 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_10870 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_10885 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S43_10885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_10895 PF00296 Luciferase-like monooxygenase M1S43_10900 PF03180 NLPA lipoprotein M1S43_10905 PF03180 NLPA lipoprotein M1S43_10910 PF00005 ABC transporter M1S43_10910 PF09383 NIL domain M1S43_10915 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_10920 PF01926 50S ribosome-binding GTPase M1S43_10920 PF06071 Protein of unknown function (DUF933) M1S43_10945 PF03591 AzlC protein M1S43_10950 PF05437 Branched-chain amino acid transport protein (AzlD) M1S43_10960 PF02222 ATP-grasp domain M1S43_10965 PF08335 GlnD PII-uridylyltransferase M1S43_10965 PF01966 HD domain M1S43_10965 PF01909 Nucleotidyltransferase domain M1S43_10970 PF00155 Aminotransferase class I and II M1S43_10980 PF12852 Cupin M1S43_10980 PF12833 Helix-turn-helix domain M1S43_10985 PF00255 Glutathione peroxidase M1S43_10990 PF01641 SelR domain M1S43_10995 PF00155 Aminotransferase class I and II M1S43_11000 PF00375 Sodium:dicarboxylate symporter family M1S43_11005 PF17763 Glutaminase/Asparaginase C-terminal domain M1S43_11005 PF00710 Asparaginase, N-terminal M1S43_11010 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S43_11010 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S43_11010 PF14579 Helix-hairpin-helix motif M1S43_11010 PF02811 PHP domain M1S43_11010 PF01336 OB-fold nucleic acid binding domain M1S43_11015 PF00588 SpoU rRNA Methylase family M1S43_11020 PF00132 Bacterial transferase hexapeptide (six repeats) M1S43_11050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_11050 PF03466 LysR substrate binding domain M1S43_11055 PF01758 Sodium Bile acid symporter family M1S43_11060 PF01022 Bacterial regulatory protein, arsR family M1S43_11065 PF03960 ArsC family M1S43_11075 PF01979 Amidohydrolase family M1S43_11075 PF13382 Adenine deaminase C-terminal domain M1S43_11085 PF03466 LysR substrate binding domain M1S43_11085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_11095 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S43_11100 PF01177 Asp/Glu/Hydantoin racemase M1S43_11105 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M1S43_11110 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_11115 PF00005 ABC transporter M1S43_11120 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S43_11130 PF00083 Sugar (and other) transporter M1S43_11135 PF00296 Luciferase-like monooxygenase M1S43_11140 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S43_11140 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_11140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_11150 PF01654 Cytochrome bd terminal oxidase subunit I M1S43_11155 PF02322 Cytochrome bd terminal oxidase subunit II M1S43_11165 PF00392 Bacterial regulatory proteins, gntR family M1S43_11165 PF00155 Aminotransferase class I and II M1S43_11170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_11170 PF03466 LysR substrate binding domain M1S43_11185 PF00698 Acyl transferase domain M1S43_11190 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M1S43_11200 PF01039 Carboxyl transferase domain M1S43_11205 PF06857 Malonate decarboxylase delta subunit (MdcD) M1S43_11210 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M1S43_11215 PF16957 Malonate decarboxylase, alpha subunit, transporter M1S43_11220 PF07690 Major Facilitator Superfamily M1S43_11235 PF00392 Bacterial regulatory proteins, gntR family M1S43_11235 PF00155 Aminotransferase class I and II M1S43_11240 PF04172 LrgB-like family M1S43_11245 PF03788 LrgA family M1S43_11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_11250 PF03466 LysR substrate binding domain M1S43_11255 PF14834 Glutathione S-transferase, C-terminal domain M1S43_11255 PF02798 Glutathione S-transferase, N-terminal domain M1S43_11260 PF02798 Glutathione S-transferase, N-terminal domain M1S43_11265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_11265 PF03466 LysR substrate binding domain M1S43_11275 PF00581 Rhodanese-like domain M1S43_11280 PF00132 Bacterial transferase hexapeptide (six repeats) M1S43_11290 PF00266 Aminotransferase class-V M1S43_11300 PF01810 LysE type translocator M1S43_11305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_11305 PF03466 LysR substrate binding domain M1S43_11315 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S43_11320 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S43_11325 PF00005 ABC transporter M1S43_11330 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_11335 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_11350 PF00072 Response regulator receiver domain M1S43_11355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_11355 PF00512 His Kinase A (phospho-acceptor) domain M1S43_11355 PF09308 LuxQ, periplasmic M1S43_11355 PF00072 Response regulator receiver domain M1S43_11365 PF13404 AsnC-type helix-turn-helix domain M1S43_11365 PF01037 Lrp/AsnC ligand binding domain M1S43_11375 PF00717 Peptidase S24-like M1S43_11400 PF18011 C-terminal domain found in long catalases M1S43_11400 PF00199 Catalase M1S43_11400 PF06628 Catalase-related immune-responsive M1S43_11410 PF18146 Damage-inducible protein CinA KH domain M1S43_11410 PF00994 Probable molybdopterin binding domain M1S43_11410 PF02464 Competence-damaged protein M1S43_11445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_11445 PF03466 LysR substrate binding domain M1S43_11465 PF00501 AMP-binding enzyme M1S43_11465 PF13193 AMP-binding enzyme C-terminal domain M1S43_11470 PF00440 Bacterial regulatory proteins, tetR family M1S43_11475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_11475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_11475 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_11480 PF01039 Carboxyl transferase domain M1S43_11485 PF00378 Enoyl-CoA hydratase/isomerase M1S43_11490 PF00289 Biotin carboxylase, N-terminal domain M1S43_11490 PF02785 Biotin carboxylase C-terminal domain M1S43_11490 PF00364 Biotin-requiring enzyme M1S43_11490 PF18140 Propionyl-coenzyme A carboxylase BT domain M1S43_11490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S43_11495 PF00682 HMGL-like M1S43_11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_11500 PF03466 LysR substrate binding domain M1S43_11515 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_11515 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S43_11515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_11515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_11525 PF07690 Major Facilitator Superfamily M1S43_11535 PF01144 Coenzyme A transferase M1S43_11540 PF01144 Coenzyme A transferase M1S43_11545 PF07690 Major Facilitator Superfamily M1S43_11550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_11550 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_11550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_11555 PF00378 Enoyl-CoA hydratase/isomerase M1S43_11565 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S43_11565 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S43_11565 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S43_11570 PF02803 Thiolase, C-terminal domain M1S43_11570 PF00108 Thiolase, N-terminal domain M1S43_11575 PF09339 IclR helix-turn-helix domain M1S43_11580 PF07690 Major Facilitator Superfamily M1S43_11585 PF03060 Nitronate monooxygenase M1S43_11590 PF00378 Enoyl-CoA hydratase/isomerase M1S43_11595 PF09339 IclR helix-turn-helix domain M1S43_11600 PF02515 CoA-transferase family III M1S43_11605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_11605 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_11605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_11610 PF07690 Major Facilitator Superfamily M1S43_11615 PF13419 Haloacid dehalogenase-like hydrolase M1S43_11620 PF00266 Aminotransferase class-V M1S43_11625 PF01266 FAD dependent oxidoreductase M1S43_11630 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_11635 PF00005 ABC transporter M1S43_11635 PF08402 TOBE domain M1S43_11645 PF07702 UTRA domain M1S43_11645 PF00392 Bacterial regulatory proteins, gntR family M1S43_11650 PF01494 FAD binding domain M1S43_11655 PF09339 IclR helix-turn-helix domain M1S43_11655 PF01614 Bacterial transcriptional regulator M1S43_11660 PF02525 Flavodoxin-like fold M1S43_11665 PF03466 LysR substrate binding domain M1S43_11665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_11670 PF02627 Carboxymuconolactone decarboxylase family M1S43_11675 PF00171 Aldehyde dehydrogenase family M1S43_11685 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S43_11695 PF00171 Aldehyde dehydrogenase family M1S43_11700 PF00296 Luciferase-like monooxygenase M1S43_11705 PF01613 Flavin reductase like domain M1S43_11710 PF12697 Alpha/beta hydrolase family M1S43_11730 PF01292 Prokaryotic cytochrome b561 M1S43_11735 PF00199 Catalase M1S43_11770 PF03061 Thioesterase superfamily M1S43_11775 PF00132 Bacterial transferase hexapeptide (six repeats) M1S43_11780 PF07848 PaaX-like protein M1S43_11780 PF08223 PaaX-like protein C-terminal domain M1S43_11785 PF00501 AMP-binding enzyme M1S43_11785 PF14535 AMP-binding enzyme C-terminal domain M1S43_11790 PF02803 Thiolase, C-terminal domain M1S43_11790 PF00108 Thiolase, N-terminal domain M1S43_11795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S43_11795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S43_11795 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S43_11800 PF00378 Enoyl-CoA hydratase/isomerase M1S43_11805 PF00378 Enoyl-CoA hydratase/isomerase M1S43_11810 PF00175 Oxidoreductase NAD-binding domain M1S43_11810 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S43_11810 PF00970 Oxidoreductase FAD-binding domain M1S43_11815 PF01883 Iron-sulfur cluster assembly protein M1S43_11820 PF05138 Phenylacetic acid catabolic protein M1S43_11825 PF06243 Phenylacetic acid degradation B M1S43_11830 PF05138 Phenylacetic acid catabolic protein M1S43_11835 PF01575 MaoC like domain M1S43_11835 PF00171 Aldehyde dehydrogenase family M1S43_11840 PF03313 Serine dehydratase alpha chain M1S43_11840 PF03315 Serine dehydratase beta chain M1S43_11845 PF13520 Amino acid permease M1S43_11850 PF00171 Aldehyde dehydrogenase family M1S43_11855 PF00083 Sugar (and other) transporter M1S43_11865 PF04324 BFD-like [2Fe-2S] binding domain M1S43_11865 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_11875 PF01266 FAD dependent oxidoreductase M1S43_11880 PF05544 Proline racemase M1S43_11885 PF00392 Bacterial regulatory proteins, gntR family M1S43_11895 PF00701 Dihydrodipicolinate synthetase family M1S43_11905 PF09278 MerR, DNA binding M1S43_11905 PF00376 MerR family regulatory protein M1S43_11920 PF02677 Epoxyqueuosine reductase QueH M1S43_11935 PF07690 Major Facilitator Superfamily M1S43_11940 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S43_11950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_11950 PF03466 LysR substrate binding domain M1S43_11970 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M1S43_11975 PF06812 ImpA, N-terminal, type VI secretion system M1S43_11995 PF01389 OmpA-like transmembrane domain M1S43_11995 PF00691 OmpA family M1S43_12005 PF14331 ImcF-related N-terminal domain M1S43_12005 PF06744 Type VI secretion protein IcmF C-terminal M1S43_12005 PF06761 Intracellular multiplication and human macrophage-killing M1S43_12020 PF05947 Type VI secretion system, TssF M1S43_12035 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M1S43_12060 PF00005 ABC transporter M1S43_12065 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S43_12070 PF01425 Amidase M1S43_12075 PF08753 NikR C terminal nickel binding domain M1S43_12075 PF01402 Ribbon-helix-helix protein, copG family M1S43_12095 PF02525 Flavodoxin-like fold M1S43_12100 PF02785 Biotin carboxylase C-terminal domain M1S43_12100 PF00289 Biotin carboxylase, N-terminal domain M1S43_12100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S43_12115 PF00107 Zinc-binding dehydrogenase M1S43_12115 PF08240 Alcohol dehydrogenase GroES-like domain M1S43_12115 PF13823 Alcohol dehydrogenase GroES-associated M1S43_12125 PF00440 Bacterial regulatory proteins, tetR family M1S43_12145 PF00654 Voltage gated chloride channel M1S43_12150 PF02785 Biotin carboxylase C-terminal domain M1S43_12150 PF00289 Biotin carboxylase, N-terminal domain M1S43_12150 PF00364 Biotin-requiring enzyme M1S43_12150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S43_12160 PF07286 Protein of unknown function (DUF1445) M1S43_12165 PF03746 LamB/YcsF family M1S43_12170 PF01566 Natural resistance-associated macrophage protein M1S43_12175 PF03466 LysR substrate binding domain M1S43_12175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_12190 PF05593 RHS Repeat M1S43_12190 PF03527 RHS protein M1S43_12195 PF04717 Type VI secretion system, phage-baseplate injector M1S43_12195 PF13296 Putative type VI secretion system Rhs element Vgr M1S43_12195 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S43_12205 PF13419 Haloacid dehalogenase-like hydrolase M1S43_12225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S43_12225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S43_12245 PF07690 Major Facilitator Superfamily M1S43_12260 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S43_12265 PF00990 Diguanylate cyclase, GGDEF domain M1S43_12265 PF00563 EAL domain M1S43_12265 PF03707 Bacterial signalling protein N terminal repeat M1S43_12270 PF00892 EamA-like transporter family M1S43_12275 PF01037 Lrp/AsnC ligand binding domain M1S43_12280 PF05192 MutS domain III M1S43_12280 PF05190 MutS family domain IV M1S43_12280 PF05188 MutS domain II M1S43_12280 PF00488 MutS domain V M1S43_12280 PF01624 MutS domain I M1S43_12290 PF11953 Domain of unknown function (DUF3470) M1S43_12290 PF00037 4Fe-4S binding domain M1S43_12300 PF01596 O-methyltransferase M1S43_12310 PF00132 Bacterial transferase hexapeptide (six repeats) M1S43_12315 PF01205 Uncharacterized protein family UPF0029 M1S43_12325 PF03412 Peptidase C39 family M1S43_12325 PF00005 ABC transporter M1S43_12325 PF00664 ABC transporter transmembrane region M1S43_12330 PF02321 Outer membrane efflux protein M1S43_12335 PF12399 Branched-chain amino acid ATP-binding cassette transporter M1S43_12335 PF00005 ABC transporter M1S43_12340 PF03968 OstA-like protein M1S43_12355 PF00571 CBS domain M1S43_12355 PF01380 SIS domain M1S43_12360 PF09190 DALR domain M1S43_12360 PF01406 tRNA synthetases class I (C) catalytic domain M1S43_12385 PF01638 HxlR-like helix-turn-helix M1S43_12390 PF07690 Major Facilitator Superfamily M1S43_12415 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S43_12415 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S43_12425 PF00313 'Cold-shock' DNA-binding domain M1S43_12430 PF01810 LysE type translocator M1S43_12460 PF02601 Exonuclease VII, large subunit M1S43_12460 PF13742 OB-fold nucleic acid binding domain M1S43_12495 PF00376 MerR family regulatory protein M1S43_12495 PF09278 MerR, DNA binding M1S43_12500 PF00403 Heavy-metal-associated domain M1S43_12505 PF00403 Heavy-metal-associated domain M1S43_12510 PF03466 LysR substrate binding domain M1S43_12510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_12520 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S43_12520 PF00355 Rieske [2Fe-2S] domain M1S43_12525 PF00866 Ring hydroxylating beta subunit M1S43_12530 PF00175 Oxidoreductase NAD-binding domain M1S43_12530 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S43_12530 PF00970 Oxidoreductase FAD-binding domain M1S43_12535 PF00106 short chain dehydrogenase M1S43_12540 PF03594 Benzoate membrane transport protein M1S43_12545 PF07690 Major Facilitator Superfamily M1S43_12555 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M1S43_12555 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M1S43_12560 PF00271 Helicase conserved C-terminal domain M1S43_12560 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M1S43_12560 PF11898 Domain of unknown function (DUF3418) M1S43_12560 PF00270 DEAD/DEAH box helicase M1S43_12560 PF04408 Helicase associated domain (HA2) M1S43_12565 PF00578 AhpC/TSA family M1S43_12565 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S43_12595 PF00043 Glutathione S-transferase, C-terminal domain M1S43_12595 PF02798 Glutathione S-transferase, N-terminal domain M1S43_12605 PF02390 Putative methyltransferase M1S43_12610 PF13417 Glutathione S-transferase, N-terminal domain M1S43_12610 PF00043 Glutathione S-transferase, C-terminal domain M1S43_12620 PF00691 OmpA family M1S43_12620 PF13488 Glycine zipper M1S43_12625 PF01979 Amidohydrolase family M1S43_12630 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S43_12630 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S43_12640 PF10672 S-adenosylmethionine-dependent methyltransferase M1S43_12640 PF01170 Putative RNA methylase family UPF0020 M1S43_12640 PF02926 THUMP domain M1S43_12655 PF02861 Clp amino terminal domain, pathogenicity island component M1S43_12655 PF17871 AAA lid domain M1S43_12655 PF00004 ATPase family associated with various cellular activities (AAA) M1S43_12655 PF07724 AAA domain (Cdc48 subfamily) M1S43_12655 PF10431 C-terminal, D2-small domain, of ClpB protein M1S43_12670 PF02566 OsmC-like protein M1S43_12680 PF00027 Cyclic nucleotide-binding domain M1S43_12680 PF13545 Crp-like helix-turn-helix domain M1S43_12690 PF00248 Aldo/keto reductase family M1S43_12705 PF00709 Adenylosuccinate synthetase M1S43_12710 PF13393 Histidyl-tRNA synthetase M1S43_12715 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S43_12715 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S43_12720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S43_12720 PF01411 tRNA synthetases class II (A) M1S43_12720 PF02272 DHHA1 domain M1S43_12725 PF01842 ACT domain M1S43_12725 PF13840 ACT domain M1S43_12725 PF00696 Amino acid kinase family M1S43_12730 PF02599 Global regulator protein family M1S43_12735 PF01351 Ribonuclease HII M1S43_12745 PF01292 Prokaryotic cytochrome b561 M1S43_12750 PF00962 Adenosine/AMP deaminase M1S43_12755 PF00860 Permease family M1S43_12765 PF00743 Flavin-binding monooxygenase-like M1S43_12770 PF00106 short chain dehydrogenase M1S43_12780 PF02678 Pirin M1S43_12780 PF17954 Quercetinase C-terminal cupin domain M1S43_12785 PF00440 Bacterial regulatory proteins, tetR family M1S43_12785 PF17932 Tetracyclin repressor-like, C-terminal domain M1S43_12795 PF00106 short chain dehydrogenase M1S43_12805 PF13610 DDE domain M1S43_12815 PF02796 Helix-turn-helix domain of resolvase M1S43_12815 PF00239 Resolvase, N terminal domain M1S43_12820 PF11809 Domain of unknown function (DUF3330) M1S43_12820 PF00563 EAL domain M1S43_12830 PF13495 Phage integrase, N-terminal SAM-like domain M1S43_12830 PF00589 Phage integrase family M1S43_12835 PF00583 Acetyltransferase (GNAT) family M1S43_12855 PF00893 Small Multidrug Resistance protein M1S43_12860 PF00809 Pterin binding enzyme M1S43_12880 PF13610 DDE domain M1S43_12885 PF01636 Phosphotransferase enzyme family M1S43_12900 PF13610 DDE domain M1S43_12905 PF00239 Resolvase, N terminal domain M1S43_12905 PF02796 Helix-turn-helix domain of resolvase M1S43_12915 PF13610 DDE domain M1S43_12925 PF02796 Helix-turn-helix domain of resolvase M1S43_12925 PF00239 Resolvase, N terminal domain M1S43_12930 PF13610 DDE domain M1S43_12940 PF04958 Arginine N-succinyltransferase beta subunit M1S43_12945 PF00202 Aminotransferase class-III M1S43_12955 PF00171 Aldehyde dehydrogenase family M1S43_12965 PF00392 Bacterial regulatory proteins, gntR family M1S43_12965 PF07729 FCD domain M1S43_12975 PF00324 Amino acid permease M1S43_12980 PF01266 FAD dependent oxidoreductase M1S43_12985 PF00324 Amino acid permease M1S43_13040 PF04717 Type VI secretion system, phage-baseplate injector M1S43_13040 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S43_13040 PF13296 Putative type VI secretion system Rhs element Vgr M1S43_13060 PF03180 NLPA lipoprotein M1S43_13065 PF05987 Bacterial protein of unknown function (DUF898) M1S43_13080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S43_13080 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_13085 PF00764 Arginosuccinate synthase M1S43_13090 PF01590 GAF domain M1S43_13090 PF00990 Diguanylate cyclase, GGDEF domain M1S43_13090 PF00360 Phytochrome region M1S43_13090 PF00563 EAL domain M1S43_13095 PF01979 Amidohydrolase family M1S43_13100 PF00929 Exonuclease M1S43_13110 PF07715 TonB-dependent Receptor Plug Domain M1S43_13110 PF00593 TonB dependent receptor M1S43_13115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S43_13115 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_13120 PF00005 ABC transporter M1S43_13120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S43_13125 PF12911 N-terminal TM domain of oligopeptide transport permease C M1S43_13125 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_13130 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_13135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1S43_13140 PF01464 Transglycosylase SLT domain M1S43_13140 PF01476 LysM domain M1S43_13140 PF01464 Transglycosylase SLT domain M1S43_13140 PF01476 LysM domain M1S43_13145 PF00929 Exonuclease M1S43_13155 PF09297 NADH pyrophosphatase zinc ribbon domain M1S43_13155 PF00293 NUDIX domain M1S43_13165 PF04972 BON domain M1S43_13170 PF02021 Uncharacterised protein family UPF0102 M1S43_13175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S43_13185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_13185 PF03466 LysR substrate binding domain M1S43_13190 PF01810 LysE type translocator M1S43_13200 PF13411 MerR HTH family regulatory protein M1S43_13210 PF01494 FAD binding domain M1S43_13215 PF01494 FAD binding domain M1S43_13220 PF00557 Metallopeptidase family M24 M1S43_13220 PF05195 Aminopeptidase P, N-terminal domain M1S43_13305 PF01464 Transglycosylase SLT domain M1S43_13305 PF01551 Peptidase family M23 M1S43_13305 PF10145 Phage-related minor tail protein M1S43_13365 PF04860 Phage portal protein M1S43_13465 PF03796 DnaB-like helicase C terminal domain M1S43_13465 PF00772 DnaB-like helicase N terminal domain M1S43_13480 PF01726 LexA DNA binding domain M1S43_13480 PF00717 Peptidase S24-like M1S43_13535 PF08019 Phosphoethanolamine transferase EptA/EptB M1S43_13535 PF00884 Sulfatase M1S43_13905 PF01812 5-formyltetrahydrofolate cyclo-ligase family M1S43_13910 PF00691 OmpA family M1S43_13910 PF04355 SmpA / OmlA family M1S43_13915 PF05662 Coiled stalk of trimeric autotransporter adhesin M1S43_13915 PF05658 Head domain of trimeric autotransporter adhesin M1S43_13915 PF03895 YadA-like membrane anchor domain M1S43_13915 PF13018 Extended Signal Peptide of Type V secretion system M1S43_13920 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S43_13920 PF02190 ATP-dependent protease La (LON) substrate-binding domain M1S43_13920 PF00004 ATPase family associated with various cellular activities (AAA) M1S43_13925 PF02590 Predicted SPOUT methyltransferase M1S43_13930 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M1S43_13940 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S43_13940 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S43_13945 PF04060 Putative Fe-S cluster M1S43_13950 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S43_13950 PF00633 Helix-hairpin-helix motif M1S43_13950 PF10576 Iron-sulfur binding domain of endonuclease III M1S43_13960 PF05191 Adenylate kinase, active site lid M1S43_13975 PF03717 Penicillin-binding Protein dimerisation domain M1S43_13975 PF00905 Penicillin binding protein transpeptidase domain M1S43_13990 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S43_13995 PF01730 UreF M1S43_14000 PF05194 UreE urease accessory protein, C-terminal domain M1S43_14000 PF02814 UreE urease accessory protein, N-terminal domain M1S43_14005 PF01979 Amidohydrolase family M1S43_14005 PF00449 Urease alpha-subunit, N-terminal domain M1S43_14010 PF00699 Urease beta subunit M1S43_14015 PF00547 Urease, gamma subunit M1S43_14020 PF01774 UreD urease accessory protein M1S43_14035 PF00463 Isocitrate lyase family M1S43_14040 PF03466 LysR substrate binding domain M1S43_14040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_14045 PF03471 Transporter associated domain M1S43_14045 PF00571 CBS domain M1S43_14045 PF01595 Cyclin M transmembrane N-terminal domain M1S43_14050 PF03600 Citrate transporter M1S43_14065 PF00009 Elongation factor Tu GTP binding domain M1S43_14070 PF01507 Phosphoadenosine phosphosulfate reductase family M1S43_14080 PF14052 Capsule assembly protein Wzi M1S43_14085 PF01336 OB-fold nucleic acid binding domain M1S43_14085 PF00152 tRNA synthetases class II (D, K and N) M1S43_14100 PF00301 Rubredoxin M1S43_14105 PF18113 Rubredoxin binding C-terminal domain M1S43_14105 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_14110 PF00561 alpha/beta hydrolase fold M1S43_14115 PF03466 LysR substrate binding domain M1S43_14115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_14125 PF13089 Polyphosphate kinase N-terminal domain M1S43_14125 PF02503 Polyphosphate kinase middle domain M1S43_14125 PF13090 Polyphosphate kinase C-terminal domain 2 M1S43_14125 PF17941 Polyphosphate kinase C-terminal domain 1 M1S43_14130 PF00912 Transglycosylase M1S43_14135 PF01694 Rhomboid family M1S43_14145 PF00005 ABC transporter M1S43_14150 PF13472 GDSL-like Lipase/Acylhydrolase family M1S43_14155 PF00484 Carbonic anhydrase M1S43_14160 PF00561 alpha/beta hydrolase fold M1S43_14170 PF07715 TonB-dependent Receptor Plug Domain M1S43_14170 PF00593 TonB dependent receptor M1S43_14175 PF01521 Iron-sulphur cluster biosynthesis M1S43_14175 PF01106 NifU-like domain M1S43_14185 PF00884 Sulfatase M1S43_14190 PF03781 Sulfatase-modifying factor enzyme 1 M1S43_14205 PF00291 Pyridoxal-phosphate dependent enzyme M1S43_14210 PF01384 Phosphate transporter family M1S43_14215 PF02965 Vitamin B12 dependent methionine synthase, activation domain M1S43_14215 PF02310 B12 binding domain M1S43_14215 PF02607 B12 binding domain M1S43_14215 PF00809 Pterin binding enzyme M1S43_14215 PF02574 Homocysteine S-methyltransferase M1S43_14220 PF02780 Transketolase, C-terminal domain M1S43_14220 PF02779 Transketolase, pyrimidine binding domain M1S43_14225 PF00456 Transketolase, thiamine diphosphate binding domain M1S43_14230 PF07690 Major Facilitator Superfamily M1S43_14240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_14240 PF03466 LysR substrate binding domain M1S43_14250 PF01263 Aldose 1-epimerase M1S43_14255 PF07690 Major Facilitator Superfamily M1S43_14260 PF12833 Helix-turn-helix domain M1S43_14260 PF02311 AraC-like ligand binding domain M1S43_14265 PF04960 Glutaminase M1S43_14270 PF01327 Polypeptide deformylase M1S43_14275 PF07690 Major Facilitator Superfamily M1S43_14285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S43_14285 PF00205 Thiamine pyrophosphate enzyme, central domain M1S43_14285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S43_14290 PF00171 Aldehyde dehydrogenase family M1S43_14295 PF03447 Homoserine dehydrogenase, NAD binding domain M1S43_14295 PF01958 Domain of unknown function DUF108 M1S43_14305 PF12697 Alpha/beta hydrolase family M1S43_14315 PF07690 Major Facilitator Superfamily M1S43_14320 PF14759 Reductase C-terminal M1S43_14320 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_14325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S43_14335 PF00355 Rieske [2Fe-2S] domain M1S43_14345 PF00355 Rieske [2Fe-2S] domain M1S43_14350 PF01614 Bacterial transcriptional regulator M1S43_14350 PF09339 IclR helix-turn-helix domain M1S43_14365 PF00378 Enoyl-CoA hydratase/isomerase M1S43_14375 PF00535 Glycosyl transferase family 2 M1S43_14380 PF14883 Hypothetical glycosyl hydrolase family 13 M1S43_14380 PF01522 Polysaccharide deacetylase M1S43_14385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S43_14390 PF07152 YaeQ protein M1S43_14395 PF00375 Sodium:dicarboxylate symporter family M1S43_14400 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S43_14400 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S43_14410 PF03061 Thioesterase superfamily M1S43_14420 PF02028 BCCT, betaine/carnitine/choline family transporter M1S43_14425 PF02028 BCCT, betaine/carnitine/choline family transporter M1S43_14430 PF13977 BetI-type transcriptional repressor, C-terminal M1S43_14430 PF00440 Bacterial regulatory proteins, tetR family M1S43_14435 PF00171 Aldehyde dehydrogenase family M1S43_14440 PF00732 GMC oxidoreductase M1S43_14440 PF05199 GMC oxidoreductase M1S43_14445 PF06039 Malate:quinone oxidoreductase (Mqo) M1S43_14455 PF02574 Homocysteine S-methyltransferase M1S43_14460 PF13520 Amino acid permease M1S43_14485 PF00701 Dihydrodipicolinate synthetase family M1S43_14490 PF00083 Sugar (and other) transporter M1S43_14610 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S43_14610 PF02767 DNA polymerase III beta subunit, central domain M1S43_14610 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S43_14650 PF05016 ParE toxin of type II toxin-antitoxin system, parDE M1S43_14805 PF07007 Lysozyme inhibitor LprI M1S43_14850 PF01695 IstB-like ATP binding protein M1S43_14860 PF00145 C-5 cytosine-specific DNA methylase M1S43_14905 PF01381 Helix-turn-helix M1S43_14905 PF00717 Peptidase S24-like M1S43_14940 PF00929 Exonuclease M1S43_15015 PF07690 Major Facilitator Superfamily M1S43_15020 PF13533 Biotin-lipoyl like M1S43_15025 PF03061 Thioesterase superfamily M1S43_15030 PF00490 Delta-aminolevulinic acid dehydratase M1S43_15035 PF01266 FAD dependent oxidoreductase M1S43_15040 PF08338 Domain of unknown function (DUF1731) M1S43_15040 PF01370 NAD dependent epimerase/dehydratase family M1S43_15060 PF00149 Calcineurin-like phosphoesterase M1S43_15060 PF12320 Type 5 capsule protein repressor C-terminal domain M1S43_15070 PF01168 Alanine racemase, N-terminal domain M1S43_15075 PF00437 Type II/IV secretion system protein M1S43_15080 PF00437 Type II/IV secretion system protein M1S43_15085 PF01475 Ferric uptake regulator family M1S43_15090 PF04355 SmpA / OmlA family M1S43_15095 PF03658 RnfH family Ubiquitin M1S43_15105 PF01814 Hemerythrin HHE cation binding domain M1S43_15110 PF13230 Glutamine amidotransferases class-II M1S43_15120 PF00696 Amino acid kinase family M1S43_15125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S43_15125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S43_15125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S43_15125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S43_15130 PF00692 dUTPase M1S43_15135 PF00580 UvrD/REP helicase N-terminal domain M1S43_15135 PF13361 UvrD-like helicase C-terminal domain M1S43_15140 PF00691 OmpA family M1S43_15140 PF13488 Glycine zipper M1S43_15155 PF03775 Septum formation inhibitor MinC, C-terminal domain M1S43_15160 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M1S43_15165 PF03776 Septum formation topological specificity factor MinE M1S43_15185 PF01810 LysE type translocator M1S43_15190 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M1S43_15190 PF17854 FtsK alpha domain M1S43_15190 PF09397 Ftsk gamma domain M1S43_15190 PF01580 FtsK/SpoIIIE family M1S43_15195 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S43_15200 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M1S43_15205 PF04376 Arginine-tRNA-protein transferase, N terminus M1S43_15205 PF04377 Arginine-tRNA-protein transferase, C terminus M1S43_15210 PF00583 Acetyltransferase (GNAT) family M1S43_15225 PF00009 Elongation factor Tu GTP binding domain M1S43_15225 PF03144 Elongation factor Tu domain 2 M1S43_15225 PF03143 Elongation factor Tu C-terminal domain M1S43_15230 PF00009 Elongation factor Tu GTP binding domain M1S43_15230 PF03144 Elongation factor Tu domain 2 M1S43_15230 PF00679 Elongation factor G C-terminus M1S43_15230 PF14492 Elongation Factor G, domain II M1S43_15230 PF03764 Elongation factor G, domain IV M1S43_15235 PF00177 Ribosomal protein S7p/S5e M1S43_15240 PF00164 Ribosomal protein S12/S23 M1S43_15250 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S43_15250 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S43_15255 PF03653 Uncharacterised protein family (UPF0093) M1S43_15260 PF02678 Pirin M1S43_15260 PF05726 Pirin C-terminal cupin domain M1S43_15270 PF00795 Carbon-nitrogen hydrolase M1S43_15270 PF02540 NAD synthase M1S43_15285 PF00970 Oxidoreductase FAD-binding domain M1S43_15285 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S43_15285 PF00175 Oxidoreductase NAD-binding domain M1S43_15290 PF00171 Aldehyde dehydrogenase family M1S43_15295 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S43_15295 PF00355 Rieske [2Fe-2S] domain M1S43_15300 PF07859 alpha/beta hydrolase fold M1S43_15305 PF02028 BCCT, betaine/carnitine/choline family transporter M1S43_15310 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S43_15315 PF03466 LysR substrate binding domain M1S43_15315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_15335 PF00037 4Fe-4S binding domain M1S43_15340 PF01467 Cytidylyltransferase-like M1S43_15345 PF01668 SmpB protein M1S43_15350 PF03358 NADPH-dependent FMN reductase M1S43_15355 PF02578 Multi-copper polyphenol oxidoreductase laccase M1S43_15360 PF00849 RNA pseudouridylate synthase M1S43_15360 PF01479 S4 domain M1S43_15365 PF13525 Outer membrane lipoprotein M1S43_15370 PF01807 CHC2 zinc finger M1S43_15370 PF10410 DnaB-helicase binding domain of primase M1S43_15370 PF08278 DNA primase DnaG DnaB-binding M1S43_15370 PF08275 DNA primase catalytic core, N-terminal domain M1S43_15375 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M1S43_15375 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M1S43_15375 PF01488 Shikimate / quinate 5-dehydrogenase M1S43_15385 PF03550 Outer membrane lipoprotein LolB M1S43_15390 PF08544 GHMP kinases C terminal M1S43_15390 PF00288 GHMP kinases N terminal domain M1S43_15415 PF14572 Phosphoribosyl synthetase-associated domain M1S43_15415 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S43_15420 PF01386 Ribosomal L25p family M1S43_15425 PF01195 Peptidyl-tRNA hydrolase M1S43_15430 PF02261 Aspartate decarboxylase M1S43_15445 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S43_15455 PF02581 Thiamine monophosphate synthase M1S43_15455 PF03070 TENA/THI-4/PQQC family M1S43_15455 PF08543 Phosphomethylpyrimidine kinase M1S43_15460 PF04972 BON domain M1S43_15460 PF01476 LysM domain M1S43_15465 PF00550 Phosphopantetheine attachment site M1S43_15475 PF00698 Acyl transferase domain M1S43_15480 PF01783 Ribosomal L32p protein family M1S43_15485 PF02620 Large ribosomal RNA subunit accumulation protein YceD M1S43_15490 PF04315 Elongation factor P hydroxylase M1S43_15495 PF01300 Telomere recombination M1S43_15500 PF02616 Segregation and condensation protein ScpA M1S43_15505 PF04079 Segregation and condensation complex subunit ScpB M1S43_15510 PF00849 RNA pseudouridylate synthase M1S43_15510 PF01479 S4 domain M1S43_15525 PF00155 Aminotransferase class I and II M1S43_15530 PF00202 Aminotransferase class-III M1S43_15530 PF06968 Biotin and Thiamin Synthesis associated domain M1S43_15530 PF04055 Radical SAM superfamily M1S43_15535 PF12697 Alpha/beta hydrolase family M1S43_15535 PF08241 Methyltransferase domain M1S43_15540 PF02358 Trehalose-phosphatase M1S43_15545 PF00982 Glycosyltransferase family 20 M1S43_15550 PF07690 Major Facilitator Superfamily M1S43_15555 PF00210 Ferritin-like domain M1S43_15560 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M1S43_15560 PF12826 Helix-hairpin-helix motif M1S43_15560 PF01653 NAD-dependent DNA ligase adenylation domain M1S43_15560 PF03120 NAD-dependent DNA ligase OB-fold domain M1S43_15560 PF00533 BRCA1 C Terminus (BRCT) domain M1S43_15570 PF06470 SMC proteins Flexible Hinge Domain M1S43_15570 PF02463 RecF/RecN/SMC N terminal domain M1S43_15580 PF01925 Sulfite exporter TauE/SafE M1S43_15590 PF03309 Type III pantothenate kinase M1S43_15595 PF00448 SRP54-type protein, GTPase domain M1S43_15595 PF02881 SRP54-type protein, helical bundle domain M1S43_15595 PF02978 Signal peptide binding domain M1S43_15605 PF01207 Dihydrouridine synthase (Dus) M1S43_15635 PF00692 dUTPase M1S43_15650 PF01048 Phosphorylase superfamily M1S43_15655 PF10609 NUBPL iron-transfer P-loop NTPase M1S43_15665 PF01588 Putative tRNA binding domain M1S43_15665 PF09334 tRNA synthetases class I (M) M1S43_15690 PF13533 Biotin-lipoyl like M1S43_15695 PF00291 Pyridoxal-phosphate dependent enzyme M1S43_15710 PF05552 Conserved TM helix M1S43_15725 PF00175 Oxidoreductase NAD-binding domain M1S43_15725 PF00970 Oxidoreductase FAD-binding domain M1S43_15730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_15730 PF03466 LysR substrate binding domain M1S43_15735 PF00313 'Cold-shock' DNA-binding domain M1S43_15745 PF00361 Proton-conducting membrane transporter M1S43_15750 PF00361 Proton-conducting membrane transporter M1S43_15755 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S43_15755 PF00361 Proton-conducting membrane transporter M1S43_15760 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S43_15765 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M1S43_15770 PF12838 4Fe-4S dicluster domain M1S43_15775 PF00146 NADH dehydrogenase M1S43_15780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S43_15780 PF00384 Molybdopterin oxidoreductase M1S43_15780 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M1S43_15785 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M1S43_15785 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M1S43_15785 PF10531 SLBB domain M1S43_15795 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M1S43_15795 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M1S43_15800 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M1S43_15810 PF17151 Periplasmic sensor domain M1S43_15810 PF00990 Diguanylate cyclase, GGDEF domain M1S43_15820 PF00672 HAMP domain M1S43_15820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_15820 PF00512 His Kinase A (phospho-acceptor) domain M1S43_15825 PF00486 Transcriptional regulatory protein, C terminal M1S43_15825 PF00072 Response regulator receiver domain M1S43_15835 PF03477 ATP cone domain M1S43_15835 PF00317 Ribonucleotide reductase, all-alpha domain M1S43_15835 PF02867 Ribonucleotide reductase, barrel domain M1S43_15845 PF00268 Ribonucleotide reductase, small chain M1S43_15855 PF00672 HAMP domain M1S43_15855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_15855 PF00512 His Kinase A (phospho-acceptor) domain M1S43_15855 PF13755 Sensor N-terminal transmembrane domain M1S43_15855 PF13756 Stimulus-sensing domain M1S43_15925 PF01011 PQQ enzyme repeat M1S43_15925 PF13360 PQQ-like domain M1S43_15950 PF02567 Phenazine biosynthesis-like protein M1S43_15975 PF01613 Flavin reductase like domain M1S43_15980 PF08267 Cobalamin-independent synthase, N-terminal domain M1S43_15980 PF01717 Cobalamin-independent synthase, Catalytic domain M1S43_15990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_15990 PF03466 LysR substrate binding domain M1S43_15995 PF01810 LysE type translocator M1S43_16005 PF12833 Helix-turn-helix domain M1S43_16005 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S43_16010 PF01546 Peptidase family M20/M25/M40 M1S43_16010 PF07687 Peptidase dimerisation domain M1S43_16020 PF03466 LysR substrate binding domain M1S43_16020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_16025 PF07690 Major Facilitator Superfamily M1S43_16035 PF03466 LysR substrate binding domain M1S43_16035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_16040 PF00890 FAD binding domain M1S43_16040 PF14537 Cytochrome c3 M1S43_16050 PF02515 CoA-transferase family III M1S43_16055 PF07690 Major Facilitator Superfamily M1S43_16060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_16060 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_16060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_16065 PF03466 LysR substrate binding domain M1S43_16065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_16070 PF00107 Zinc-binding dehydrogenase M1S43_16070 PF08240 Alcohol dehydrogenase GroES-like domain M1S43_16075 PF00962 Adenosine/AMP deaminase M1S43_16100 PF02445 Quinolinate synthetase A protein M1S43_16105 PF01960 ArgJ family M1S43_16110 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S43_16110 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S43_16115 PF00893 Small Multidrug Resistance protein M1S43_16130 PF07732 Multicopper oxidase M1S43_16130 PF07731 Multicopper oxidase M1S43_16130 PF00394 Multicopper oxidase M1S43_16145 PF00834 Ribulose-phosphate 3 epimerase family M1S43_16155 PF00756 Putative esterase M1S43_16165 PF04445 Putative SAM-dependent methyltransferase M1S43_16170 PF00814 Glycoprotease family M1S43_16175 PF00132 Bacterial transferase hexapeptide (six repeats) M1S43_16180 PF00293 NUDIX domain M1S43_16220 PF00425 chorismate binding enzyme M1S43_16220 PF04715 Anthranilate synthase component I, N terminal region M1S43_16225 PF00155 Aminotransferase class I and II M1S43_16230 PF00815 Histidinol dehydrogenase M1S43_16235 PF01634 ATP phosphoribosyltransferase M1S43_16240 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S43_16245 PF01722 BolA-like protein M1S43_16250 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M1S43_16255 PF04552 Sigma-54, DNA binding domain M1S43_16255 PF00309 Sigma-54 factor, Activator interacting domain (AID) M1S43_16255 PF04963 Sigma-54 factor, core binding domain M1S43_16300 PF00795 Carbon-nitrogen hydrolase M1S43_16310 PF01047 MarR family M1S43_16315 PF02566 OsmC-like protein M1S43_16320 PF00437 Type II/IV secretion system protein M1S43_16340 PF01612 3'-5' exonuclease M1S43_16340 PF00476 DNA polymerase family A M1S43_16340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S43_16340 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S43_16345 PF02325 YGGT family M1S43_16350 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S43_16350 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S43_16355 PF01171 PP-loop family M1S43_16355 PF11734 TilS substrate C-terminal domain M1S43_16355 PF09179 TilS substrate binding domain M1S43_16360 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M1S43_16365 PF02541 Ppx/GppA phosphatase family M1S43_16370 PF00085 Thioredoxin M1S43_16375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S43_16375 PF07498 Rho termination factor, N-terminal domain M1S43_16375 PF07497 Rho termination factor, RNA-binding domain M1S43_16390 PF00216 Bacterial DNA-binding protein M1S43_16395 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M1S43_16395 PF03483 B3/4 domain M1S43_16395 PF03484 tRNA synthetase B5 domain M1S43_16395 PF01588 Putative tRNA binding domain M1S43_16395 PF03147 Ferredoxin-fold anticodon binding domain M1S43_16400 PF01409 tRNA synthetases class II core domain (F) M1S43_16400 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M1S43_16420 PF00453 Ribosomal protein L20 M1S43_16425 PF01632 Ribosomal protein L35 M1S43_16435 PF07690 Major Facilitator Superfamily M1S43_16440 PF09335 SNARE associated Golgi protein M1S43_16445 PF02798 Glutathione S-transferase, N-terminal domain M1S43_16445 PF00043 Glutathione S-transferase, C-terminal domain M1S43_16450 PF05198 Translation initiation factor IF-3, N-terminal domain M1S43_16450 PF00707 Translation initiation factor IF-3, C-terminal domain M1S43_16455 PF02824 TGS domain M1S43_16455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S43_16455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S43_16455 PF03129 Anticodon binding domain M1S43_16460 PF00501 AMP-binding enzyme M1S43_16460 PF13193 AMP-binding enzyme C-terminal domain M1S43_16465 PF04751 Protein of unknown function (DUF615) M1S43_16470 PF00381 PTS HPr component phosphorylation site M1S43_16475 PF03668 P-loop ATPase protein family M1S43_16480 PF02569 Pantoate-beta-alanine ligase M1S43_16485 PF02548 Ketopantoate hydroxymethyltransferase M1S43_16490 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M1S43_16495 PF01743 Poly A polymerase head domain M1S43_16495 PF12626 Polymerase A arginine-rich C-terminus M1S43_16495 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S43_16505 PF03819 MazG nucleotide pyrophosphohydrolase domain M1S43_16515 PF04607 Region found in RelA / SpoT proteins M1S43_16515 PF02824 TGS domain M1S43_16515 PF13291 ACT domain M1S43_16520 PF05958 tRNA (Uracil-5-)-methyltransferase M1S43_16530 PF00291 Pyridoxal-phosphate dependent enzyme M1S43_16535 PF00672 HAMP domain M1S43_16535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_16535 PF00512 His Kinase A (phospho-acceptor) domain M1S43_16535 PF01627 Hpt domain M1S43_16535 PF00072 Response regulator receiver domain M1S43_16535 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M1S43_16540 PF00378 Enoyl-CoA hydratase/isomerase M1S43_16545 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S43_16545 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S43_16550 PF01261 Xylose isomerase-like TIM barrel M1S43_16560 PF00106 short chain dehydrogenase M1S43_16565 PF02233 NAD(P) transhydrogenase beta subunit M1S43_16570 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M1S43_16575 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M1S43_16575 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M1S43_16580 PF00892 EamA-like transporter family M1S43_16590 PF07690 Major Facilitator Superfamily M1S43_16595 PF01207 Dihydrouridine synthase (Dus) M1S43_16605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_16605 PF03466 LysR substrate binding domain M1S43_16615 PF00899 ThiF family M1S43_16625 PF00330 Aconitase family (aconitate hydratase) M1S43_16625 PF00694 Aconitase C-terminal domain M1S43_16630 PF01026 TatD related DNase M1S43_16645 PF16658 Class II release factor RF3, C-terminal domain M1S43_16645 PF00009 Elongation factor Tu GTP binding domain M1S43_16645 PF03144 Elongation factor Tu domain 2 M1S43_16665 PF00990 Diguanylate cyclase, GGDEF domain M1S43_16665 PF00563 EAL domain M1S43_16665 PF03707 Bacterial signalling protein N terminal repeat M1S43_16670 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M1S43_16670 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M1S43_16675 PF10369 Small subunit of acetolactate synthase M1S43_16680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S43_16680 PF00205 Thiamine pyrophosphate enzyme, central domain M1S43_16680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S43_16690 PF08264 Anticodon-binding domain of tRNA M1S43_16690 PF00133 tRNA synthetases class I (I, L, M and V) M1S43_16690 PF13603 Leucyl-tRNA synthetase, Domain 2 M1S43_16690 PF09334 tRNA synthetases class I (M) M1S43_16705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S43_16710 PF02687 FtsX-like permease family M1S43_16710 PF00005 ABC transporter M1S43_16710 PF12704 MacB-like periplasmic core domain M1S43_16715 PF02321 Outer membrane efflux protein M1S43_16730 PF00929 Exonuclease M1S43_16735 PF03193 RsgA GTPase M1S43_16745 PF00462 Glutaredoxin M1S43_16750 PF02556 Preprotein translocase subunit SecB M1S43_16765 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S43_16765 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S43_16780 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S43_16780 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S43_16790 PF04820 Tryptophan halogenase M1S43_16810 PF00221 Aromatic amino acid lyase M1S43_16825 PF00501 AMP-binding enzyme M1S43_16825 PF13193 AMP-binding enzyme C-terminal domain M1S43_16835 PF00550 Phosphopantetheine attachment site M1S43_16840 PF00550 Phosphopantetheine attachment site M1S43_16855 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M1S43_16855 PF01926 50S ribosome-binding GTPase M1S43_16860 PF13360 PQQ-like domain M1S43_16870 PF03129 Anticodon binding domain M1S43_16870 PF13393 Histidyl-tRNA synthetase M1S43_16880 PF13464 Domain of unknown function (DUF4115) M1S43_16890 PF04055 Radical SAM superfamily M1S43_16895 PF00334 Nucleoside diphosphate kinase M1S43_16900 PF04384 Iron-sulphur cluster assembly M1S43_16905 PF01569 PAP2 superfamily M1S43_16910 PF00534 Glycosyl transferases group 1 M1S43_16910 PF13439 Glycosyltransferase Family 4 M1S43_16915 PF03572 Peptidase family S41 M1S43_16915 PF00595 PDZ domain M1S43_16915 PF11818 C-terminal domain of tail specific protease (DUF3340) M1S43_16915 PF17804 Tail specific protease N-terminal domain M1S43_16920 PF00933 Glycosyl hydrolase family 3 N terminal domain M1S43_16930 PF00561 alpha/beta hydrolase fold M1S43_16935 PF00171 Aldehyde dehydrogenase family M1S43_16940 PF00171 Aldehyde dehydrogenase family M1S43_16945 PF01202 Shikimate kinase M1S43_16950 PF02447 GntP family permease M1S43_16955 PF01081 KDPG and KHG aldolase M1S43_16960 PF00920 Dehydratase family M1S43_16965 PF00871 Acetokinase family M1S43_16970 PF07085 DRTGG domain M1S43_16970 PF01515 Phosphate acetyl/butaryl transferase M1S43_16975 PF05681 Fumarate hydratase (Fumerase) M1S43_16975 PF05683 Fumarase C-terminus M1S43_16990 PF06689 ClpX C4-type zinc finger M1S43_16990 PF07724 AAA domain (Cdc48 subfamily) M1S43_16990 PF10431 C-terminal, D2-small domain, of ClpB protein M1S43_16995 PF00574 Clp protease M1S43_17000 PF05698 Bacterial trigger factor protein (TF) C-terminus M1S43_17000 PF05697 Bacterial trigger factor protein (TF) M1S43_17000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S43_17005 PF07715 TonB-dependent Receptor Plug Domain M1S43_17005 PF00593 TonB dependent receptor M1S43_17010 PF13640 2OG-Fe(II) oxygenase superfamily M1S43_17010 PF18331 PKHD-type hydroxylase C-terminal domain M1S43_17015 PF00682 HMGL-like M1S43_17015 PF08502 LeuA allosteric (dimerisation) domain M1S43_17020 PF00561 alpha/beta hydrolase fold M1S43_17025 PF07021 Methionine biosynthesis protein MetW M1S43_17025 PF00561 alpha/beta hydrolase fold M1S43_17035 PF01725 Ham1 family M1S43_17045 PF02416 mttA/Hcf106 family M1S43_17050 PF02416 mttA/Hcf106 family M1S43_17055 PF00902 Sec-independent protein translocase protein (TatC) M1S43_17075 PF01790 Prolipoprotein diacylglyceryl transferase M1S43_17090 PF00303 Thymidylate synthase M1S43_17095 PF00186 Dihydrofolate reductase M1S43_17105 PF01625 Peptide methionine sulfoxide reductase M1S43_17115 PF01618 MotA/TolQ/ExbB proton channel family M1S43_17125 PF00551 Formyl transferase M1S43_17125 PF01842 ACT domain M1S43_17135 PF00171 Aldehyde dehydrogenase family M1S43_17140 PF00830 Ribosomal L28 family M1S43_17145 PF00471 Ribosomal protein L33 M1S43_17150 PF02254 TrkA-N domain M1S43_17150 PF00999 Sodium/hydrogen exchanger family M1S43_17170 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) M1S43_17175 PF00580 UvrD/REP helicase N-terminal domain M1S43_17175 PF13361 UvrD-like helicase C-terminal domain M1S43_17190 PF08272 Topoisomerase I zinc-ribbon-like M1S43_17190 PF01131 DNA topoisomerase M1S43_17190 PF01751 Toprim domain M1S43_17190 PF01396 Topoisomerase DNA binding C4 zinc finger M1S43_17200 PF01638 HxlR-like helix-turn-helix M1S43_17205 PF08240 Alcohol dehydrogenase GroES-like domain M1S43_17205 PF00107 Zinc-binding dehydrogenase M1S43_17210 PF04102 SlyX M1S43_17215 PF00005 ABC transporter M1S43_17215 PF12848 ABC transporter M1S43_17215 PF16326 ABC transporter C-terminal domain M1S43_17220 PF01810 LysE type translocator M1S43_17225 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S43_17235 PF00375 Sodium:dicarboxylate symporter family M1S43_17245 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S43_17245 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S43_17265 PF01416 tRNA pseudouridine synthase M1S43_17275 PF01176 Translation initiation factor 1A / IF-1 M1S43_17290 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S43_17300 PF00694 Aconitase C-terminal domain M1S43_17305 PF00330 Aconitase family (aconitate hydratase) M1S43_17315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_17315 PF03466 LysR substrate binding domain M1S43_17335 PF00293 NUDIX domain M1S43_17340 PF00391 PEP-utilising enzyme, mobile domain M1S43_17340 PF02896 PEP-utilising enzyme, TIM barrel domain M1S43_17340 PF01590 GAF domain M1S43_17340 PF05524 PEP-utilising enzyme, N-terminal M1S43_17345 PF00141 Peroxidase M1S43_17350 PF12706 Beta-lactamase superfamily domain M1S43_17355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_17355 PF03466 LysR substrate binding domain M1S43_17365 PF02798 Glutathione S-transferase, N-terminal domain M1S43_17370 PF08279 HTH domain M1S43_17370 PF13280 WYL domain M1S43_17375 PF13419 Haloacid dehalogenase-like hydrolase M1S43_17380 PF01479 S4 domain M1S43_17380 PF00849 RNA pseudouridylate synthase M1S43_17385 PF12111 Polyribonucleotide phosphorylase C terminal M1S43_17385 PF10150 Ribonuclease E/G family M1S43_17385 PF00575 S1 RNA binding domain M1S43_17390 PF00501 AMP-binding enzyme M1S43_17390 PF13193 AMP-binding enzyme C-terminal domain M1S43_17405 PF03466 LysR substrate binding domain M1S43_17405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_17410 PF00106 short chain dehydrogenase M1S43_17415 PF06969 HemN C-terminal domain M1S43_17415 PF04055 Radical SAM superfamily M1S43_17425 PF01554 MatE M1S43_17430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_17430 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_17430 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S43_17435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_17435 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S43_17440 PF03109 ABC1 family M1S43_17445 PF01197 Ribosomal protein L31 M1S43_17460 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1S43_17480 PF03884 DNA gyrase inhibitor YacG M1S43_17485 PF00753 Metallo-beta-lactamase superfamily M1S43_17490 PF00762 Ferrochelatase M1S43_17500 PF01177 Asp/Glu/Hydantoin racemase M1S43_17515 PF01206 Sulfurtransferase TusA M1S43_17520 PF00571 CBS domain M1S43_17520 PF03471 Transporter associated domain M1S43_17525 PF00795 Carbon-nitrogen hydrolase M1S43_17530 PF01588 Putative tRNA binding domain M1S43_17540 PF08334 Type II secretion system (T2SS), protein G M1S43_17540 PF07963 Prokaryotic N-terminal methylation motif M1S43_17545 PF00482 Type II secretion system (T2SS), protein F M1S43_17550 PF00271 Helicase conserved C-terminal domain M1S43_17550 PF17764 3′ DNA-binding domain (3′BD) M1S43_17550 PF18074 Primosomal protein N C-terminal domain M1S43_17550 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M1S43_17550 PF00270 DEAD/DEAH box helicase M1S43_17555 PF00999 Sodium/hydrogen exchanger family M1S43_17555 PF02254 TrkA-N domain M1S43_17560 PF01430 Hsp33 protein M1S43_17570 PF01556 DnaJ C terminal domain M1S43_17570 PF00226 DnaJ domain M1S43_17580 PF01544 CorA-like Mg2+ transporter protein M1S43_17585 PF00013 KH domain M1S43_17585 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M1S43_17585 PF01138 3' exoribonuclease family, domain 1 M1S43_17585 PF03725 3' exoribonuclease family, domain 2 M1S43_17585 PF00575 S1 RNA binding domain M1S43_17590 PF00312 Ribosomal protein S15 M1S43_17595 PF00144 Beta-lactamase M1S43_17600 PF13538 UvrD-like helicase C-terminal domain M1S43_17605 PF13361 UvrD-like helicase C-terminal domain M1S43_17605 PF12705 PD-(D/E)XK nuclease superfamily M1S43_17605 PF00580 UvrD/REP helicase N-terminal domain M1S43_17610 PF17946 RecC C-terminal domain M1S43_17620 PF03976 Polyphosphate kinase 2 (PPK2) M1S43_17630 PF01209 ubiE/COQ5 methyltransferase family M1S43_17640 PF03109 ABC1 family M1S43_17645 PF01494 FAD binding domain M1S43_17650 PF01502 Phosphoribosyl-AMP cyclohydrolase M1S43_17665 PF00361 Proton-conducting membrane transporter M1S43_17665 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S43_17665 PF13244 Domain of unknown function (DUF4040) M1S43_17665 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M1S43_17670 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S43_17675 PF00361 Proton-conducting membrane transporter M1S43_17680 PF01899 Na+/H+ ion antiporter subunit M1S43_17685 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M1S43_17690 PF03334 Na+/H+ antiporter subunit M1S43_17695 PF02033 Ribosome-binding factor A M1S43_17700 PF04760 Translation initiation factor IF-2, N-terminal region M1S43_17700 PF00009 Elongation factor Tu GTP binding domain M1S43_17700 PF11987 Translation-initiation factor 2 M1S43_17700 PF08364 Bacterial translation initiation factor IF-2 associated region M1S43_17705 PF08529 NusA N-terminal domain M1S43_17705 PF13184 NusA-like KH domain M1S43_17705 PF00575 S1 RNA binding domain M1S43_17710 PF17384 RimP C-terminal SH3 domain M1S43_17710 PF02576 RimP N-terminal domain M1S43_17730 PF03840 Preprotein translocase SecG subunit M1S43_17735 PF00121 Triosephosphate isomerase M1S43_17740 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S43_17740 PF00437 Type II/IV secretion system protein M1S43_17745 PF00482 Type II secretion system (T2SS), protein F M1S43_17755 PF01478 Type IV leader peptidase family M1S43_17755 PF06750 Bacterial Peptidase A24 N-terminal domain M1S43_17760 PF01121 Dephospho-CoA kinase M1S43_17770 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S43_17770 PF00588 SpoU rRNA Methylase family M1S43_17775 PF06865 Pyrimidine/purine nucleoside phosphorylase M1S43_17785 PF02463 RecF/RecN/SMC N terminal domain M1S43_17790 PF02622 Uncharacterized ACR, COG1678 M1S43_17795 PF03652 Holliday junction resolvase M1S43_17800 PF13533 Biotin-lipoyl like M1S43_17825 PF02805 Metal binding domain of Ada M1S43_17825 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S43_17825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S43_17825 PF12833 Helix-turn-helix domain M1S43_17830 PF01066 CDP-alcohol phosphatidyltransferase M1S43_17840 PF01541 GIY-YIG catalytic domain M1S43_17840 PF02151 UvrB/uvrC motif M1S43_17840 PF08459 UvrC Helix-hairpin-helix N-terminal M1S43_17865 PF02803 Thiolase, C-terminal domain M1S43_17865 PF00108 Thiolase, N-terminal domain M1S43_17885 PF09278 MerR, DNA binding M1S43_17885 PF00376 MerR family regulatory protein M1S43_17895 PF01323 DSBA-like thioredoxin domain M1S43_17910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_17910 PF00183 Hsp90 protein M1S43_17925 PF13726 Na+-H+ antiporter family M1S43_17925 PF03553 Na+/H+ antiporter family M1S43_17930 PF00561 alpha/beta hydrolase fold M1S43_17950 PF04997 RNA polymerase Rpb1, domain 1 M1S43_17950 PF00623 RNA polymerase Rpb1, domain 2 M1S43_17950 PF05000 RNA polymerase Rpb1, domain 4 M1S43_17950 PF04998 RNA polymerase Rpb1, domain 5 M1S43_17950 PF04983 RNA polymerase Rpb1, domain 3 M1S43_17955 PF04563 RNA polymerase beta subunit M1S43_17955 PF04561 RNA polymerase Rpb2, domain 2 M1S43_17955 PF04565 RNA polymerase Rpb2, domain 3 M1S43_17955 PF10385 RNA polymerase beta subunit external 1 domain M1S43_17955 PF00562 RNA polymerase Rpb2, domain 6 M1S43_17955 PF04560 RNA polymerase Rpb2, domain 7 M1S43_17960 PF00542 Ribosomal protein L7/L12 C-terminal domain M1S43_17960 PF16320 Ribosomal protein L7/L12 dimerisation domain M1S43_17965 PF00466 Ribosomal protein L10 M1S43_17970 PF00687 Ribosomal protein L1p/L10e family M1S43_17975 PF00298 Ribosomal protein L11, RNA binding domain M1S43_17975 PF03946 Ribosomal protein L11, N-terminal domain M1S43_17980 PF02357 Transcription termination factor nusG M1S43_17980 PF00467 KOW motif M1S43_17985 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M1S43_18020 PF04715 Anthranilate synthase component I, N terminal region M1S43_18020 PF00425 chorismate binding enzyme M1S43_18025 PF13419 Haloacid dehalogenase-like hydrolase M1S43_18030 PF12401 Protein of unknown function (DUF2662) M1S43_18030 PF00498 FHA domain M1S43_18035 PF03958 Bacterial type II/III secretion system short domain M1S43_18035 PF00263 Bacterial type II and III secretion system protein M1S43_18050 PF00816 H-NS histone family M1S43_18075 PF03900 Porphobilinogen deaminase, C-terminal domain M1S43_18075 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M1S43_18080 PF00072 Response regulator receiver domain M1S43_18080 PF04397 LytTr DNA-binding domain M1S43_18085 PF07694 5TMR of 5TMR-LYT M1S43_18085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_18085 PF06580 Histidine kinase M1S43_18090 PF14698 Argininosuccinate lyase C-terminal M1S43_18090 PF00206 Lyase M1S43_18095 PF04362 Bacterial Fe(2+) trafficking M1S43_18100 PF01895 PhoU domain M1S43_18105 PF02321 Outer membrane efflux protein M1S43_18110 PF00892 EamA-like transporter family M1S43_18125 PF13667 ThiC-associated domain M1S43_18125 PF01964 Radical SAM ThiC family M1S43_18130 PF00293 NUDIX domain M1S43_18135 PF00149 Calcineurin-like phosphoesterase M1S43_18140 PF01258 Prokaryotic dksA/traR C4-type zinc finger M1S43_18145 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S43_18150 PF01098 Cell cycle protein M1S43_18155 PF02875 Mur ligase family, glutamate ligase domain M1S43_18155 PF08245 Mur ligase middle domain M1S43_18165 PF07664 Ferrous iron transport protein B C terminus M1S43_18165 PF02421 Ferrous iron transport protein B M1S43_18165 PF07670 Nucleoside recognition M1S43_18175 PF02899 Phage integrase, N-terminal SAM-like domain M1S43_18175 PF00589 Phage integrase family M1S43_18180 PF10411 Disulfide bond isomerase protein N-terminus M1S43_18180 PF13098 Thioredoxin-like domain M1S43_18185 PF03447 Homoserine dehydrogenase, NAD binding domain M1S43_18185 PF01842 ACT domain M1S43_18185 PF00742 Homoserine dehydrogenase M1S43_18190 PF00291 Pyridoxal-phosphate dependent enzyme M1S43_18195 PF00768 D-alanyl-D-alanine carboxypeptidase M1S43_18200 PF00196 Bacterial regulatory proteins, luxR family M1S43_18200 PF00072 Response regulator receiver domain M1S43_18205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S43_18205 PF00512 His Kinase A (phospho-acceptor) domain M1S43_18210 PF02954 Bacterial regulatory protein, Fis family M1S43_18210 PF00072 Response regulator receiver domain M1S43_18210 PF00158 Sigma-54 interaction domain M1S43_18215 PF00595 PDZ domain M1S43_18215 PF03572 Peptidase family S41 M1S43_18220 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M1S43_18220 PF01676 Metalloenzyme superfamily M1S43_18225 PF03739 Lipopolysaccharide export system permease LptF/LptG M1S43_18235 PF00883 Cytosol aminopeptidase family, catalytic domain M1S43_18235 PF02789 Cytosol aminopeptidase family, N-terminal domain M1S43_18255 PF00677 Lumazine binding domain M1S43_18265 PF01872 RibD C-terminal domain M1S43_18265 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S43_18270 PF03477 ATP cone domain M1S43_18275 PF00909 Ammonium Transporter Family M1S43_18280 PF00543 Nitrogen regulatory protein P-II M1S43_18300 PF01636 Phosphotransferase enzyme family M1S43_18305 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M1S43_18325 PF02909 Tetracyclin repressor-like, C-terminal domain M1S43_18325 PF00440 Bacterial regulatory proteins, tetR family M1S43_18330 PF07690 Major Facilitator Superfamily M1S43_18340 PF01740 STAS domain M1S43_18340 PF00916 Sulfate permease family M1S43_18345 PF00582 Universal stress protein family M1S43_18385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S43_18385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S43_18385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S43_18385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S43_18390 PF00809 Pterin binding enzyme M1S43_18405 PF00665 Integrase core domain M1S43_18430 PF00589 Phage integrase family M1S43_18430 PF02899 Phage integrase, N-terminal SAM-like domain M1S43_18460 PF00916 Sulfate permease family M1S43_18460 PF01740 STAS domain M1S43_18465 PF00582 Universal stress protein family M1S43_18485 PF00665 Integrase core domain M1S43_18500 PF00155 Aminotransferase class I and II M1S43_18500 PF00392 Bacterial regulatory proteins, gntR family M1S43_18510 PF00701 Dihydrodipicolinate synthetase family M1S43_18525 PF03573 outer membrane porin, OprD family M1S43_18530 PF00719 Inorganic pyrophosphatase M1S43_18545 PF00501 AMP-binding enzyme M1S43_18545 PF13193 AMP-binding enzyme C-terminal domain M1S43_18550 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S43_18550 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S43_18555 PF07690 Major Facilitator Superfamily M1S43_18560 PF03458 UPF0126 domain M1S43_18565 PF02810 SEC-C motif M1S43_18570 PF03471 Transporter associated domain M1S43_18570 PF03741 Integral membrane protein TerC family M1S43_18575 PF03641 Possible lysine decarboxylase M1S43_18580 PF07690 Major Facilitator Superfamily M1S43_18590 PF11798 IMS family HHH motif M1S43_18590 PF11799 impB/mucB/samB family C-terminal domain M1S43_18590 PF00817 impB/mucB/samB family M1S43_18610 PF11842 Domain of unknown function (DUF3362) M1S43_18610 PF08497 Radical SAM N-terminal M1S43_18610 PF04055 Radical SAM superfamily M1S43_18630 PF03358 NADPH-dependent FMN reductase M1S43_18640 PF00291 Pyridoxal-phosphate dependent enzyme M1S43_18700 PF01327 Polypeptide deformylase M1S43_18710 PF02481 DNA recombination-mediator protein A M1S43_18710 PF17782 DprA winged helix domain M1S43_18715 PF01300 Telomere recombination M1S43_18720 PF00892 EamA-like transporter family M1S43_18725 PF00440 Bacterial regulatory proteins, tetR family M1S43_18730 PF07690 Major Facilitator Superfamily M1S43_18740 PF00255 Glutathione peroxidase M1S43_18750 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M1S43_18755 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S43_18755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S43_18760 PF00231 ATP synthase M1S43_18765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S43_18765 PF00306 ATP synthase alpha/beta chain, C terminal domain M1S43_18765 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S43_18770 PF00213 ATP synthase delta (OSCP) subunit M1S43_18775 PF00430 ATP synthase B/B' CF(0) M1S43_18780 PF00137 ATP synthase subunit C M1S43_18785 PF00119 ATP synthase A chain M1S43_18805 PF00005 ABC transporter M1S43_18810 PF00950 ABC 3 transport family M1S43_18815 PF01810 LysE type translocator M1S43_18820 PF04261 Dyp-type peroxidase family M1S43_18830 PF00390 Malic enzyme, N-terminal domain M1S43_18830 PF03949 Malic enzyme, NAD binding domain M1S43_18835 PF03485 Arginyl tRNA synthetase N terminal domain M1S43_18835 PF05746 DALR anticodon binding domain M1S43_18835 PF00750 tRNA synthetases class I (R) M1S43_18855 PF02678 Pirin M1S43_18855 PF05726 Pirin C-terminal cupin domain M1S43_18865 PF03551 Transcriptional regulator PadR-like family M1S43_18870 PF01909 Nucleotidyltransferase domain M1S43_18870 PF13427 Domain of unknown function (DUF4111) M1S43_18875 PF00117 Glutamine amidotransferase class-I M1S43_18875 PF00958 GMP synthase C terminal domain M1S43_18875 PF02540 NAD synthase M1S43_18880 PF04286 Protein of unknown function (DUF445) M1S43_18885 PF07681 DoxX M1S43_18890 PF09335 SNARE associated Golgi protein M1S43_18905 PF13614 AAA domain M1S43_18915 PF01722 BolA-like protein M1S43_18930 PF01648 4'-phosphopantetheinyl transferase superfamily M1S43_18935 PF12697 Alpha/beta hydrolase family M1S43_18955 PF16197 Ketoacyl-synthetase C-terminal extension M1S43_18955 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S43_18955 PF08242 Methyltransferase domain M1S43_18955 PF14765 Polyketide synthase dehydratase M1S43_18955 PF00975 Thioesterase domain M1S43_18955 PF00550 Phosphopantetheine attachment site M1S43_18955 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S43_18960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_18960 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_18960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_18965 PF00501 AMP-binding enzyme M1S43_18970 PF03472 Autoinducer binding domain M1S43_18970 PF00196 Bacterial regulatory proteins, luxR family M1S43_18980 PF00765 Autoinducer synthase M1S43_18985 PF07690 Major Facilitator Superfamily M1S43_18985 PF00083 Sugar (and other) transporter M1S43_18990 PF00378 Enoyl-CoA hydratase/isomerase M1S43_18995 PF00378 Enoyl-CoA hydratase/isomerase M1S43_19000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S43_19000 PF02770 Acyl-CoA dehydrogenase, middle domain M1S43_19000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S43_19005 PF00501 AMP-binding enzyme M1S43_19005 PF13193 AMP-binding enzyme C-terminal domain M1S43_19010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S43_19010 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S43_19015 PF00171 Aldehyde dehydrogenase family M1S43_19025 PF00324 Amino acid permease M1S43_19030 PF00324 Amino acid permease M1S43_19035 PF01042 Endoribonuclease L-PSP M1S43_19040 PF00842 Alanine racemase, C-terminal domain M1S43_19040 PF01168 Alanine racemase, N-terminal domain M1S43_19045 PF01266 FAD dependent oxidoreductase M1S43_19050 PF01037 Lrp/AsnC ligand binding domain M1S43_19060 PF07715 TonB-dependent Receptor Plug Domain M1S43_19060 PF00593 TonB dependent receptor M1S43_19075 PF00849 RNA pseudouridylate synthase M1S43_19090 PF00440 Bacterial regulatory proteins, tetR family M1S43_19090 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S43_19100 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S43_19100 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S43_19135 PF00330 Aconitase family (aconitate hydratase) M1S43_19135 PF00694 Aconitase C-terminal domain M1S43_19140 PF00285 Citrate synthase, C-terminal domain M1S43_19150 PF00392 Bacterial regulatory proteins, gntR family M1S43_19150 PF07729 FCD domain M1S43_19160 PF00155 Aminotransferase class I and II M1S43_19165 PF09330 D-lactate dehydrogenase, membrane binding M1S43_19165 PF01565 FAD binding domain M1S43_19170 PF01070 FMN-dependent dehydrogenase M1S43_19175 PF07729 FCD domain M1S43_19175 PF00392 Bacterial regulatory proteins, gntR family M1S43_19180 PF02652 L-lactate permease M1S43_19185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S43_19185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S43_19185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S43_19185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S43_19190 PF16363 GDP-mannose 4,6 dehydratase M1S43_19195 PF00342 Phosphoglucose isomerase M1S43_19200 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S43_19200 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S43_19200 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S43_19205 PF00483 Nucleotidyl transferase M1S43_19210 PF02397 Bacterial sugar transferase M1S43_19215 PF00535 Glycosyl transferase family 2 M1S43_19245 PF08666 SAF domain M1S43_19245 PF03102 NeuB family M1S43_19260 PF02348 Cytidylyltransferase M1S43_19265 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M1S43_19270 PF02719 Polysaccharide biosynthesis protein M1S43_19275 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S43_19275 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S43_19275 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S43_19280 PF18412 Outer-membrane lipoprotein Wza C-terminal domain M1S43_19280 PF10531 SLBB domain M1S43_19280 PF02563 Polysaccharide biosynthesis/export protein M1S43_19285 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S43_19290 PF13807 G-rich domain on putative tyrosine kinase M1S43_19290 PF13614 AAA domain M1S43_19290 PF02706 Chain length determinant protein M1S43_19295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S43_19295 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S43_19300 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S43_19300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S43_19305 PF03023 Lipid II flippase MurJ M1S43_19310 PF01510 N-acetylmuramoyl-L-alanine amidase M1S43_19315 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M1S43_19315 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M1S43_19325 PF04185 Phosphoesterase family M1S43_19325 PF05506 Domain of unknown function (DUF756) M1S43_19335 PF03725 3' exoribonuclease family, domain 2 M1S43_19335 PF01138 3' exoribonuclease family, domain 1 M1S43_19340 PF00487 Fatty acid desaturase M1S43_19345 PF00175 Oxidoreductase NAD-binding domain M1S43_19350 PF00440 Bacterial regulatory proteins, tetR family M1S43_19355 PF00440 Bacterial regulatory proteins, tetR family M1S43_19355 PF08360 QacR-like protein, C-terminal region M1S43_19360 PF01323 DSBA-like thioredoxin domain M1S43_19370 PF13419 Haloacid dehalogenase-like hydrolase M1S43_19375 PF00106 short chain dehydrogenase M1S43_19390 PF00696 Amino acid kinase family M1S43_19390 PF00583 Acetyltransferase (GNAT) family M1S43_19395 PF09084 NMT1/THI5 like M1S43_19400 PF09084 NMT1/THI5 like M1S43_19405 PF00296 Luciferase-like monooxygenase M1S43_19410 PF00528 Binding-protein-dependent transport system inner membrane component M1S43_19415 PF00005 ABC transporter M1S43_19420 PF00440 Bacterial regulatory proteins, tetR family M1S43_19420 PF08362 YcdC-like protein, C-terminal region M1S43_19425 PF01048 Phosphorylase superfamily M1S43_19435 PF01687 Riboflavin kinase M1S43_19435 PF06574 FAD synthetase M1S43_19440 PF06827 Zinc finger found in FPG and IleRS M1S43_19440 PF00133 tRNA synthetases class I (I, L, M and V) M1S43_19440 PF08264 Anticodon-binding domain of tRNA M1S43_19445 PF01252 Signal peptidase (SPase) II M1S43_19450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S43_19490 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S43_19495 PF07859 alpha/beta hydrolase fold M1S43_19515 PF03466 LysR substrate binding domain M1S43_19515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S43_19520 PF01025 GrpE M1S43_19525 PF00012 Hsp70 protein M1S43_19545 PF13406 Transglycosylase SLT domain M1S43_19550 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M1S43_19550 PF02222 ATP-grasp domain M1S43_19555 PF00731 AIR carboxylase M1S43_19565 PF08245 Mur ligase middle domain M1S43_19565 PF02875 Mur ligase family, glutamate ligase domain M1S43_19565 PF01225 Mur ligase family, catalytic domain M1S43_19575 PF01569 PAP2 superfamily M1S43_19580 PF03741 Integral membrane protein TerC family M1S43_19590 PF03738 Glutathionylspermidine synthase preATP-grasp M1S43_19595 PF00355 Rieske [2Fe-2S] domain M1S43_19600 PF01979 Amidohydrolase family M1S43_19605 PF00156 Phosphoribosyl transferase domain M1S43_19615 PF13098 Thioredoxin-like domain M1S43_19615 PF10411 Disulfide bond isomerase protein N-terminus M1S43_19620 PF16916 Dimerisation domain of Zinc Transporter M1S43_19620 PF01545 Cation efflux family M1S43_19625 PF02583 Metal-sensitive transcriptional repressor M1S43_19630 PF12631 MnmE helical domain M1S43_19630 PF01926 50S ribosome-binding GTPase M1S43_19630 PF10396 GTP-binding protein TrmE N-terminus M1S43_19635 PF14849 YidC periplasmic domain M1S43_19635 PF02096 60Kd inner membrane protein M1S43_19640 PF01809 Putative membrane protein insertion efficiency factor M1S43_19645 PF00825 Ribonuclease P M1S43_19650 PF00468 Ribosomal protein L34 M1S43_19655 PF13614 AAA domain M1S43_19740 PF10544 T5orf172 domain M1S43_19745 PF13614 AAA domain M1S43_19765 PF00905 Penicillin binding protein transpeptidase domain M1S43_19810 PF01556 DnaJ C terminal domain M1S43_19810 PF00226 DnaJ domain M1S43_19810 PF00684 DnaJ central domain M1S43_19835 PF08751 TrwC relaxase M1S43_19835 PF18340 DNA relaxase TraI 2B/2B-like domain M1S43_19835 PF07057 DNA helicase TraI M1S43_19835 PF18272 single-stranded DNA binding TraI N-terminal subdomain M1S43_19890 PF02796 Helix-turn-helix domain of resolvase M1S43_19890 PF00239 Resolvase, N terminal domain M1S43_19940 PF10411 Disulfide bond isomerase protein N-terminus M1S43_19940 PF13098 Thioredoxin-like domain M1S43_19970 PF06834 TraU protein M1S43_19980 PF06986 Type-1V conjugative transfer system mating pair stabilisation M1S43_19990 PF06122 Conjugative relaxosome accessory transposon protein M1S43_20010 PF13438 Domain of unknown function (DUF4113) M1S43_20010 PF00817 impB/mucB/samB family M1S43_20010 PF11799 impB/mucB/samB family C-terminal domain M1S43_20060 PF00565 Staphylococcal nuclease homologue M1S43_20075 PF00816 H-NS histone family M1S43_20145 PF08275 DNA primase catalytic core, N-terminal domain M1S43_20145 PF01807 CHC2 zinc finger M1S43_20145 PF10410 DnaB-helicase binding domain of primase M1S43_20175 PF00625 Guanylate kinase M1S43_20190 PF07015 VirC1 protein M1S43_20200 PF00589 Phage integrase family M1S43_20200 PF02899 Phage integrase, N-terminal SAM-like domain M1S43_20235 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S43_20235 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S43_20235 PF14579 Helix-hairpin-helix motif M1S43_20235 PF02811 PHP domain M1S43_20245 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S43_20245 PF14579 Helix-hairpin-helix motif M1S43_20245 PF02811 PHP domain M1S43_20245 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S43_20260 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S43_20260 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S43_20260 PF00476 DNA polymerase family A M1S43_20260 PF01612 3'-5' exonuclease M1S43_20265 PF03161 LAGLIDADG DNA endonuclease family M1S43_20265 PF00154 recA bacterial DNA recombination protein M1S43_20290 PF02463 RecF/RecN/SMC N terminal domain M1S43_20290 PF06470 SMC proteins Flexible Hinge Domain M1S43_20310 PF03477 ATP cone domain M1S43_20310 PF02867 Ribonucleotide reductase, barrel domain M1S43_20310 PF00317 Ribonucleotide reductase, all-alpha domain M1S43_20315 PF00268 Ribonucleotide reductase, small chain M1S43_20355 PF00929 Exonuclease M1S43_20390 PF13737 Transposase DDE domain M1S43_20400 PF00440 Bacterial regulatory proteins, tetR family M1S43_20400 PF16925 Tetracyclin repressor-like, C-terminal domain M1S43_20410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S43_20420 PF00465 Iron-containing alcohol dehydrogenase M1S43_20435 PF00756 Putative esterase M1S43_20440 PF08240 Alcohol dehydrogenase GroES-like domain M1S43_20440 PF00107 Zinc-binding dehydrogenase M1S43_20445 PF02583 Metal-sensitive transcriptional repressor M1S43_20460 PF00107 Zinc-binding dehydrogenase M1S43_20460 PF13823 Alcohol dehydrogenase GroES-associated M1S43_20460 PF08240 Alcohol dehydrogenase GroES-like domain M1S43_20525 PF04650 YSIRK type signal peptide M1S43_20525 PF03373 Octapeptide repeat M1S43_20525 PF02216 B domain M1S43_20525 PF00746 LPXTG cell wall anchor motif M1S43_20525 PF01476 LysM domain M1S43_20540 PF02559 CarD-like/TRCF domain M1S43_20540 PF00270 DEAD/DEAH box helicase M1S43_20540 PF00271 Helicase conserved C-terminal domain M1S43_20540 PF03461 TRCF domain M1S43_20540 PF17757 UvrB interaction domain M1S43_20560 PF00005 ABC transporter M1S43_20560 PF09383 NIL domain