locus-tag class description M1S15_00005 PF00308 Bacterial dnaA protein M1S15_00005 PF08299 Bacterial dnaA protein helix-turn-helix M1S15_00005 PF11638 DnaA N-terminal domain M1S15_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S15_00010 PF02767 DNA polymerase III beta subunit, central domain M1S15_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S15_00015 PF02463 RecF/RecN/SMC N terminal domain M1S15_00020 PF00204 DNA gyrase B M1S15_00020 PF00986 DNA gyrase B subunit, carboxyl terminus M1S15_00020 PF18053 DNA gyrase B subunit insert domain M1S15_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_00020 PF01751 Toprim domain M1S15_00030 PF09335 SNARE associated Golgi protein M1S15_00035 PF00005 ABC transporter M1S15_00035 PF12848 ABC transporter M1S15_00055 PF01521 Iron-sulphur cluster biosynthesis M1S15_00060 PF00561 alpha/beta hydrolase fold M1S15_00065 PF03702 Anhydro-N-acetylmuramic acid kinase M1S15_00070 PF00579 tRNA synthetases class I (W and Y) M1S15_00110 PF00209 Sodium:neurotransmitter symporter family M1S15_00120 PF01189 16S rRNA methyltransferase RsmB/F M1S15_00120 PF01029 NusB family M1S15_00125 PF02911 Formyl transferase, C-terminal domain M1S15_00125 PF00551 Formyl transferase M1S15_00130 PF00920 Dehydratase family M1S15_00145 PF03466 LysR substrate binding domain M1S15_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_00150 PF00860 Permease family M1S15_00155 PF00311 Phosphoenolpyruvate carboxylase M1S15_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S15_00160 PF00440 Bacterial regulatory proteins, tetR family M1S15_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S15_00170 PF00873 AcrB/AcrD/AcrF family M1S15_00180 PF01556 DnaJ C terminal domain M1S15_00180 PF00684 DnaJ central domain M1S15_00180 PF00226 DnaJ domain M1S15_00190 PF01113 Dihydrodipicolinate reductase, N-terminus M1S15_00190 PF05173 Dihydrodipicolinate reductase, C-terminus M1S15_00200 PF07690 Major Facilitator Superfamily M1S15_00205 PF00248 Aldo/keto reductase family M1S15_00225 PF00155 Aminotransferase class I and II M1S15_00225 PF00392 Bacterial regulatory proteins, gntR family M1S15_00230 PF00107 Zinc-binding dehydrogenase M1S15_00230 PF08240 Alcohol dehydrogenase GroES-like domain M1S15_00235 PF03352 Methyladenine glycosylase M1S15_00250 PF14815 NUDIX domain M1S15_00250 PF00633 Helix-hairpin-helix motif M1S15_00250 PF10576 Iron-sulfur binding domain of endonuclease III M1S15_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S15_00265 PF07043 Protein of unknown function (DUF1328) M1S15_00270 PF03692 Putative zinc- or iron-chelating domain M1S15_00275 PF07995 Glucose / Sorbosone dehydrogenase M1S15_00280 PF12002 MgsA AAA+ ATPase C terminal M1S15_00280 PF16193 AAA C-terminal domain M1S15_00280 PF00004 ATPase family associated with various cellular activities (AAA) M1S15_00285 PF01226 Formate/nitrite transporter M1S15_00295 PF01259 SAICAR synthetase M1S15_00305 PF00701 Dihydrodipicolinate synthetase family M1S15_00310 PF00857 Isochorismatase family M1S15_00315 PF01758 Sodium Bile acid symporter family M1S15_00320 PF01554 MatE M1S15_00325 PF04463 Protein of unknown function (DUF523) M1S15_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S15_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S15_00345 PF14497 Glutathione S-transferase, C-terminal domain M1S15_00345 PF02798 Glutathione S-transferase, N-terminal domain M1S15_00355 PF00324 Amino acid permease M1S15_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S15_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S15_00375 PF07702 UTRA domain M1S15_00375 PF00392 Bacterial regulatory proteins, gntR family M1S15_00380 PF05962 HutD M1S15_00385 PF17391 Urocanase N-terminal domain M1S15_00385 PF17392 Urocanase C-terminal domain M1S15_00385 PF01175 Urocanase Rossmann-like domain M1S15_00390 PF00221 Aromatic amino acid lyase M1S15_00395 PF00324 Amino acid permease M1S15_00400 PF01979 Amidohydrolase family M1S15_00405 PF00491 Arginase family M1S15_00420 PF01177 Asp/Glu/Hydantoin racemase M1S15_00425 PF01380 SIS domain M1S15_00430 PF14602 Hexapeptide repeat of succinyl-transferase M1S15_00430 PF12804 MobA-like NTP transferase domain M1S15_00430 PF00132 Bacterial transferase hexapeptide (six repeats) M1S15_00435 PF04608 Phosphatidylglycerophosphatase A M1S15_00440 PF00586 AIR synthase related protein, N-terminal domain M1S15_00440 PF02769 AIR synthase related protein, C-terminal domain M1S15_00445 PF01029 NusB family M1S15_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase M1S15_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S15_00455 PF00925 GTP cyclohydrolase II M1S15_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase M1S15_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M1S15_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S15_00490 PF00581 Rhodanese-like domain M1S15_00495 PF02666 Phosphatidylserine decarboxylase M1S15_00500 PF03069 Acetamidase/Formamidase family M1S15_00520 PF00989 PAS fold M1S15_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_00520 PF00512 His Kinase A (phospho-acceptor) domain M1S15_00520 PF11808 Phosphate regulon sensor protein PhoR M1S15_00525 PF00486 Transcriptional regulatory protein, C terminal M1S15_00525 PF00072 Response regulator receiver domain M1S15_00535 PF00106 short chain dehydrogenase M1S15_00540 PF01554 MatE M1S15_00545 PF00155 Aminotransferase class I and II M1S15_00550 PF04286 Protein of unknown function (DUF445) M1S15_00565 PF04262 Glutamate-cysteine ligase M1S15_00570 PF02600 Disulfide bond formation protein DsbB M1S15_00575 PF13296 Putative type VI secretion system Rhs element Vgr M1S15_00575 PF04717 Type VI secretion system, phage-baseplate injector M1S15_00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S15_00580 PF01476 LysM domain M1S15_00580 PF00877 NlpC/P60 family M1S15_00595 PF05728 Uncharacterised protein family (UPF0227) M1S15_00600 PF01751 Toprim domain M1S15_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_00600 PF00986 DNA gyrase B subunit, carboxyl terminus M1S15_00600 PF00204 DNA gyrase B M1S15_00605 PF00106 short chain dehydrogenase M1S15_00610 PF04115 Ureidoglycolate lyase M1S15_00615 PF03561 Allantoicase repeat M1S15_00620 PF01494 FAD binding domain M1S15_00630 PF00860 Permease family M1S15_00635 PF00576 HIUase/Transthyretin family M1S15_00665 PF02683 Cytochrome C biogenesis protein transmembrane region M1S15_00665 PF11412 Disulphide bond corrector protein DsbC M1S15_00670 PF00990 Diguanylate cyclase, GGDEF domain M1S15_00670 PF07694 5TMR of 5TMR-LYT M1S15_00675 PF07859 alpha/beta hydrolase fold M1S15_00685 PF03960 ArsC family M1S15_00690 PF03372 Endonuclease/Exonuclease/phosphatase family M1S15_00695 PF00156 Phosphoribosyl transferase domain M1S15_00700 PF00593 TonB dependent receptor M1S15_00700 PF07715 TonB-dependent Receptor Plug Domain M1S15_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M1S15_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M1S15_00715 PF03033 Glycosyltransferase family 28 N-terminal domain M1S15_00715 PF04101 Glycosyltransferase family 28 C-terminal domain M1S15_00720 PF08245 Mur ligase middle domain M1S15_00720 PF02875 Mur ligase family, glutamate ligase domain M1S15_00720 PF01225 Mur ligase family, catalytic domain M1S15_00725 PF01820 D-ala D-ala ligase N-terminus M1S15_00725 PF07478 D-ala D-ala ligase C-terminus M1S15_00730 PF08478 POTRA domain, FtsQ-type M1S15_00730 PF03799 Cell division protein FtsQ M1S15_00735 PF02491 SHS2 domain inserted in FTSA M1S15_00740 PF00091 Tubulin/FtsZ family, GTPase domain M1S15_00740 PF12327 FtsZ family, C-terminal domain M1S15_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M1S15_00755 PF01551 Peptidase family M23 M1S15_00760 PF00456 Transketolase, thiamine diphosphate binding domain M1S15_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain M1S15_00765 PF00364 Biotin-requiring enzyme M1S15_00765 PF02817 e3 binding domain M1S15_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S15_00775 PF01169 Uncharacterized protein family UPF0016 M1S15_00780 PF00593 TonB dependent receptor M1S15_00780 PF07715 TonB-dependent Receptor Plug Domain M1S15_00785 PF00258 Flavodoxin M1S15_00785 PF01613 Flavin reductase like domain M1S15_00790 PF03692 Putative zinc- or iron-chelating domain M1S15_00795 PF00478 IMP dehydrogenase / GMP reductase domain M1S15_00795 PF00571 CBS domain M1S15_00800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S15_00800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S15_00800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S15_00800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S15_00805 PF01243 Pyridoxamine 5'-phosphate oxidase M1S15_00805 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M1S15_00810 PF01368 DHH family M1S15_00810 PF17768 RecJ OB domain M1S15_00810 PF02272 DHHA1 domain M1S15_00830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S15_00835 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M1S15_00840 PF04452 RNA methyltransferase M1S15_00845 PF00924 Mechanosensitive ion channel M1S15_00855 PF16177 Acetyl-coenzyme A synthetase N-terminus M1S15_00855 PF00501 AMP-binding enzyme M1S15_00855 PF13193 AMP-binding enzyme C-terminal domain M1S15_00860 PF00857 Isochorismatase family M1S15_00865 PF01037 Lrp/AsnC ligand binding domain M1S15_00870 PF00872 Transposase, Mutator family M1S15_00875 PF00296 Luciferase-like monooxygenase M1S15_00880 PF03358 NADPH-dependent FMN reductase M1S15_00885 PF00072 Response regulator receiver domain M1S15_00885 PF00196 Bacterial regulatory proteins, luxR family M1S15_00895 PF00072 Response regulator receiver domain M1S15_00895 PF01627 Hpt domain M1S15_00895 PF00512 His Kinase A (phospho-acceptor) domain M1S15_00895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_00895 PF00672 HAMP domain M1S15_00900 PF04341 Protein of unknown function, DUF485 M1S15_00905 PF00474 Sodium:solute symporter family M1S15_00915 PF02028 BCCT, betaine/carnitine/choline family transporter M1S15_00925 PF00990 Diguanylate cyclase, GGDEF domain M1S15_00935 PF17760 UvrA interaction domain M1S15_00935 PF17755 UvrA DNA-binding domain M1S15_00935 PF00005 ABC transporter M1S15_00940 PF16925 Tetracyclin repressor-like, C-terminal domain M1S15_00940 PF00440 Bacterial regulatory proteins, tetR family M1S15_00945 PF00107 Zinc-binding dehydrogenase M1S15_00945 PF08240 Alcohol dehydrogenase GroES-like domain M1S15_00955 PF06942 GlpM protein M1S15_00960 PF02581 Thiamine monophosphate synthase M1S15_00960 PF03070 TENA/THI-4/PQQC family M1S15_00960 PF08543 Phosphomethylpyrimidine kinase M1S15_00970 PF07690 Major Facilitator Superfamily M1S15_00975 PF00436 Single-strand binding protein family M1S15_00985 PF03591 AzlC protein M1S15_00995 PF00324 Amino acid permease M1S15_01000 PF00155 Aminotransferase class I and II M1S15_01000 PF00392 Bacterial regulatory proteins, gntR family M1S15_01005 PF00202 Aminotransferase class-III M1S15_01010 PF00171 Aldehyde dehydrogenase family M1S15_01015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_01020 PF00857 Isochorismatase family M1S15_01025 PF02678 Pirin M1S15_01025 PF05726 Pirin C-terminal cupin domain M1S15_01030 PF01593 Flavin containing amine oxidoreductase M1S15_01050 PF07690 Major Facilitator Superfamily M1S15_01055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_01055 PF03466 LysR substrate binding domain M1S15_01075 PF00248 Aldo/keto reductase family M1S15_01080 PF02311 AraC-like ligand binding domain M1S15_01080 PF12833 Helix-turn-helix domain M1S15_01110 PF01638 HxlR-like helix-turn-helix M1S15_01115 PF02525 Flavodoxin-like fold M1S15_01135 PF02705 K+ potassium transporter M1S15_01160 PF00230 Major intrinsic protein M1S15_01175 PF00977 Histidine biosynthesis protein M1S15_01180 PF01636 Phosphotransferase enzyme family M1S15_01195 PF03992 Antibiotic biosynthesis monooxygenase M1S15_01210 PF00977 Histidine biosynthesis protein M1S15_01225 PF00117 Glutamine amidotransferase class-I M1S15_01230 PF00475 Imidazoleglycerol-phosphate dehydratase M1S15_01250 PF00583 Acetyltransferase (GNAT) family M1S15_01255 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M1S15_01255 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M1S15_01265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_01265 PF00512 His Kinase A (phospho-acceptor) domain M1S15_01265 PF00672 HAMP domain M1S15_01270 PF00486 Transcriptional regulatory protein, C terminal M1S15_01270 PF00072 Response regulator receiver domain M1S15_01275 PF17674 HHH domain M1S15_01275 PF00575 S1 RNA binding domain M1S15_01275 PF09371 Tex-like protein N-terminal domain M1S15_01275 PF16921 Tex protein YqgF-like domain M1S15_01280 PF01740 STAS domain M1S15_01280 PF00916 Sulfate permease family M1S15_01285 PF00106 short chain dehydrogenase M1S15_01290 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S15_01295 PF12848 ABC transporter M1S15_01295 PF00005 ABC transporter M1S15_01320 PF04191 Phospholipid methyltransferase M1S15_01340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S15_01340 PF00529 HlyD membrane-fusion protein of T1SS M1S15_01345 PF00873 AcrB/AcrD/AcrF family M1S15_01350 PF01545 Cation efflux family M1S15_01380 PF00324 Amino acid permease M1S15_01395 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S15_01410 PF01795 MraW methylase family M1S15_01420 PF03717 Penicillin-binding Protein dimerisation domain M1S15_01420 PF00905 Penicillin binding protein transpeptidase domain M1S15_01425 PF08245 Mur ligase middle domain M1S15_01425 PF02875 Mur ligase family, glutamate ligase domain M1S15_01425 PF01225 Mur ligase family, catalytic domain M1S15_01430 PF08245 Mur ligase middle domain M1S15_01430 PF02875 Mur ligase family, glutamate ligase domain M1S15_01430 PF01225 Mur ligase family, catalytic domain M1S15_01435 PF00953 Glycosyl transferase family 4 M1S15_01445 PF13847 Methyltransferase domain M1S15_01450 PF17092 Penicillin-binding protein OB-like domain M1S15_01450 PF00912 Transglycosylase M1S15_01450 PF00905 Penicillin binding protein transpeptidase domain M1S15_01455 PF11104 Type IV pilus assembly protein PilM; M1S15_01460 PF05137 Fimbrial assembly protein (PilN) M1S15_01465 PF04350 Pilus assembly protein, PilO M1S15_01475 PF07660 Secretin and TonB N terminus short domain M1S15_01475 PF03958 Bacterial type II/III secretion system short domain M1S15_01475 PF00263 Bacterial type II and III secretion system protein M1S15_01475 PF11741 AMIN domain M1S15_01480 PF01202 Shikimate kinase M1S15_01485 PF01761 3-dehydroquinate synthase M1S15_01495 PF01645 Conserved region in glutamate synthase M1S15_01495 PF04898 Glutamate synthase central domain M1S15_01495 PF00310 Glutamine amidotransferases class-II M1S15_01495 PF01493 GXGXG motif M1S15_01500 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_01500 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M1S15_01510 PF04011 LemA family M1S15_01515 PF04536 TPM domain M1S15_01525 PF00114 Pilin (bacterial filament) M1S15_01525 PF07963 Prokaryotic N-terminal methylation motif M1S15_01535 PF04932 O-Antigen ligase M1S15_01535 PF15864 Protein glycosylation ligase M1S15_01535 PF11846 Virulence factor membrane-bound polymerase, C-terminal M1S15_01540 PF00210 Ferritin-like domain M1S15_01545 PF04324 BFD-like [2Fe-2S] binding domain M1S15_01550 PF01042 Endoribonuclease L-PSP M1S15_01555 PF13291 ACT domain M1S15_01555 PF04607 Region found in RelA / SpoT proteins M1S15_01555 PF02824 TGS domain M1S15_01565 PF01192 RNA polymerase Rpb6 M1S15_01570 PF00625 Guanylate kinase M1S15_01575 PF02401 LytB protein M1S15_01615 PF00886 Ribosomal protein S16 M1S15_01620 PF01782 RimM N-terminal domain M1S15_01620 PF05239 PRC-barrel domain M1S15_01625 PF01746 tRNA (Guanine-1)-methyltransferase M1S15_01630 PF01245 Ribosomal protein L19 M1S15_01635 PF00561 alpha/beta hydrolase fold M1S15_01640 PF03280 Proteobacterial lipase chaperone protein M1S15_01645 PF09157 Pseudouridine synthase II TruB, C-terminal M1S15_01645 PF16198 tRNA pseudouridylate synthase B C-terminal domain M1S15_01645 PF01509 TruB family pseudouridylate synthase (N terminal domain) M1S15_01650 PF01925 Sulfite exporter TauE/SafE M1S15_01660 PF00892 EamA-like transporter family M1S15_01665 PF00892 EamA-like transporter family M1S15_01670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S15_01670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S15_01675 PF02913 FAD linked oxidases, C-terminal domain M1S15_01675 PF01565 FAD binding domain M1S15_01685 PF03992 Antibiotic biosynthesis monooxygenase M1S15_01690 PF02525 Flavodoxin-like fold M1S15_01700 PF07690 Major Facilitator Superfamily M1S15_01705 PF12805 FUSC-like inner membrane protein yccS M1S15_01710 PF00080 Copper/zinc superoxide dismutase (SODC) M1S15_01715 PF01594 AI-2E family transporter M1S15_01720 PF13614 AAA domain M1S15_01750 PF00324 Amino acid permease M1S15_01755 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S15_01755 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S15_01760 PF00202 Aminotransferase class-III M1S15_01765 PF04958 Arginine N-succinyltransferase beta subunit M1S15_01770 PF00171 Aldehyde dehydrogenase family M1S15_01775 PF04996 Succinylarginine dihydrolase M1S15_01780 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M1S15_01795 PF05922 Peptidase inhibitor I9 M1S15_01795 PF00082 Subtilase family M1S15_01810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_01810 PF03466 LysR substrate binding domain M1S15_01815 PF00892 EamA-like transporter family M1S15_01825 PF02092 Glycyl-tRNA synthetase beta subunit M1S15_01825 PF05746 DALR anticodon binding domain M1S15_01830 PF02091 Glycyl-tRNA synthetase alpha subunit M1S15_01855 PF00571 CBS domain M1S15_01860 PF04024 PspC domain M1S15_01870 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S15_01870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_01870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_01870 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_01880 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M1S15_01880 PF01488 Shikimate / quinate 5-dehydrogenase M1S15_01880 PF08501 Shikimate dehydrogenase substrate binding domain M1S15_01885 PF01218 Coproporphyrinogen III oxidase M1S15_01890 PF00925 GTP cyclohydrolase II M1S15_01895 PF02779 Transketolase, pyrimidine binding domain M1S15_01895 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M1S15_01895 PF02780 Transketolase, C-terminal domain M1S15_01900 PF00459 Inositol monophosphatase family M1S15_01905 PF03880 DbpA RNA binding domain M1S15_01905 PF00270 DEAD/DEAH box helicase M1S15_01905 PF12343 Cold shock protein DEAD box A M1S15_01905 PF00271 Helicase conserved C-terminal domain M1S15_01915 PF00005 ABC transporter M1S15_01920 PF02405 Permease MlaE M1S15_01930 PF05494 MlaC protein M1S15_01940 PF01544 CorA-like Mg2+ transporter protein M1S15_01945 PF03641 Possible lysine decarboxylase M1S15_01950 PF00293 NUDIX domain M1S15_01955 PF00156 Phosphoribosyl transferase domain M1S15_01960 PF00271 Helicase conserved C-terminal domain M1S15_01960 PF00270 DEAD/DEAH box helicase M1S15_01960 PF17191 RecG wedge domain M1S15_01975 PF01553 Acyltransferase M1S15_01985 PF00375 Sodium:dicarboxylate symporter family M1S15_01995 PF01926 50S ribosome-binding GTPase M1S15_02000 PF02082 Transcriptional regulator M1S15_02005 PF00970 Oxidoreductase FAD-binding domain M1S15_02005 PF00175 Oxidoreductase NAD-binding domain M1S15_02005 PF00042 Globin M1S15_02010 PF05872 Bacterial protein of unknown function (DUF853) M1S15_02015 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S15_02020 PF00117 Glutamine amidotransferase class-I M1S15_02025 PF00338 Ribosomal protein S10p/S20e M1S15_02030 PF00297 Ribosomal protein L3 M1S15_02035 PF00573 Ribosomal protein L4/L1 family M1S15_02040 PF00276 Ribosomal protein L23 M1S15_02045 PF03947 Ribosomal Proteins L2, C-terminal domain M1S15_02045 PF00181 Ribosomal Proteins L2, RNA binding domain M1S15_02050 PF00203 Ribosomal protein S19 M1S15_02055 PF00237 Ribosomal protein L22p/L17e M1S15_02065 PF00252 Ribosomal protein L16p/L10e M1S15_02070 PF00831 Ribosomal L29 protein M1S15_02075 PF00366 Ribosomal protein S17 M1S15_02080 PF00238 Ribosomal protein L14p/L23e M1S15_02085 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M1S15_02085 PF00467 KOW motif M1S15_02090 PF00281 Ribosomal protein L5 M1S15_02090 PF00673 ribosomal L5P family C-terminus M1S15_02095 PF00253 Ribosomal protein S14p/S29e M1S15_02100 PF00410 Ribosomal protein S8 M1S15_02105 PF00347 Ribosomal protein L6 M1S15_02110 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M1S15_02115 PF00333 Ribosomal protein S5, N-terminal domain M1S15_02115 PF03719 Ribosomal protein S5, C-terminal domain M1S15_02120 PF00327 Ribosomal protein L30p/L7e M1S15_02125 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M1S15_02130 PF00344 SecY translocase M1S15_02135 PF00444 Ribosomal protein L36 M1S15_02140 PF00416 Ribosomal protein S13/S18 M1S15_02145 PF00411 Ribosomal protein S11 M1S15_02150 PF00163 Ribosomal protein S4/S9 N-terminal domain M1S15_02150 PF01479 S4 domain M1S15_02155 PF01000 RNA polymerase Rpb3/RpoA insert domain M1S15_02155 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M1S15_02155 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M1S15_02160 PF01196 Ribosomal protein L17 M1S15_02165 PF00743 Flavin-binding monooxygenase-like M1S15_02170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_02170 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_02170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_02175 PF03937 Flavinator of succinate dehydrogenase M1S15_02205 PF09526 Probable metal-binding protein (DUF2387) M1S15_02210 PF01432 Peptidase family M3 M1S15_02215 PF00773 RNB domain M1S15_02215 PF17876 Cold shock domain M1S15_02215 PF08461 Ribonuclease R winged-helix domain M1S15_02215 PF08206 Ribonuclease B OB domain M1S15_02215 PF00575 S1 RNA binding domain M1S15_02260 PF01557 Fumarylacetoacetate (FAA) hydrolase family M1S15_02265 PF12833 Helix-turn-helix domain M1S15_02270 PF00892 EamA-like transporter family M1S15_02275 PF03631 Virulence factor BrkB M1S15_02280 PF03358 NADPH-dependent FMN reductase M1S15_02305 PF02130 Uncharacterized protein family UPF0054 M1S15_02310 PF02562 PhoH-like protein M1S15_02315 PF04055 Radical SAM superfamily M1S15_02315 PF01938 TRAM domain M1S15_02315 PF00919 Uncharacterized protein family UPF0004 M1S15_02320 PF10145 Phage-related minor tail protein M1S15_02320 PF01464 Transglycosylase SLT domain M1S15_02320 PF01551 Peptidase family M23 M1S15_02330 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1S15_02330 PF00056 lactate/malate dehydrogenase, NAD binding domain M1S15_02350 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M1S15_02355 PF01066 CDP-alcohol phosphatidyltransferase M1S15_02400 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_02400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_02400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_02405 PF17932 Tetracyclin repressor-like, C-terminal domain M1S15_02405 PF00440 Bacterial regulatory proteins, tetR family M1S15_02420 PF01039 Carboxyl transferase domain M1S15_02425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_02425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_02425 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_02435 PF02785 Biotin carboxylase C-terminal domain M1S15_02435 PF00289 Biotin carboxylase, N-terminal domain M1S15_02435 PF00364 Biotin-requiring enzyme M1S15_02435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S15_02445 PF04386 Stringent starvation protein B M1S15_02450 PF13417 Glutathione S-transferase, N-terminal domain M1S15_02450 PF00043 Glutathione S-transferase, C-terminal domain M1S15_02455 PF00380 Ribosomal protein S9/S16 M1S15_02460 PF00572 Ribosomal protein L13 M1S15_02465 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M1S15_02470 PF00398 Ribosomal RNA adenine dimethylase M1S15_02475 PF00149 Calcineurin-like phosphoesterase M1S15_02495 PF16360 GTP-binding GTPase Middle Region M1S15_02495 PF13167 GTP-binding GTPase N-terminal M1S15_02495 PF01926 50S ribosome-binding GTPase M1S15_02505 PF13091 PLD-like domain M1S15_02510 PF10518 TAT (twin-arginine translocation) pathway signal sequence M1S15_02510 PF00149 Calcineurin-like phosphoesterase M1S15_02515 PF01389 OmpA-like transmembrane domain M1S15_02515 PF00691 OmpA family M1S15_02520 PF00990 Diguanylate cyclase, GGDEF domain M1S15_02520 PF17152 Periplasmic sensor domain M1S15_02555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S15_02555 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_02565 PF00753 Metallo-beta-lactamase superfamily M1S15_02565 PF04273 Putative phosphatase (DUF442) M1S15_02570 PF00561 alpha/beta hydrolase fold M1S15_02575 PF00085 Thioredoxin M1S15_02580 PF03061 Thioesterase superfamily M1S15_02590 PF04461 Protein of unknown function (DUF520) M1S15_02600 PF01266 FAD dependent oxidoreductase M1S15_02600 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S15_02610 PF03795 YCII-related domain M1S15_02615 PF04279 Intracellular septation protein A M1S15_02620 PF02811 PHP domain M1S15_02625 PF01062 Bestrophin, RFP-TM, chloride channel M1S15_02630 PF04002 RadC-like JAB domain M1S15_02635 PF02441 Flavoprotein M1S15_02635 PF04127 DNA / pantothenate metabolism flavoprotein M1S15_02640 PF02355 Protein export membrane protein M1S15_02640 PF07549 SecD/SecF GG Motif M1S15_02645 PF07549 SecD/SecF GG Motif M1S15_02645 PF13721 SecD export protein N-terminal TM region M1S15_02645 PF02355 Protein export membrane protein M1S15_02650 PF02699 Preprotein translocase subunit M1S15_02655 PF01702 Queuine tRNA-ribosyltransferase M1S15_02670 PF02547 Queuosine biosynthesis protein M1S15_02700 PF00436 Single-strand binding protein family M1S15_02765 PF00717 Peptidase S24-like M1S15_02770 PF13438 Domain of unknown function (DUF4113) M1S15_02770 PF00817 impB/mucB/samB family M1S15_02770 PF11799 impB/mucB/samB family C-terminal domain M1S15_02770 PF11798 IMS family HHH motif M1S15_02855 PF01510 N-acetylmuramoyl-L-alanine amidase M1S15_02855 PF01471 Putative peptidoglycan binding domain M1S15_02910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_02910 PF07689 KaiB domain M1S15_02910 PF00512 His Kinase A (phospho-acceptor) domain M1S15_02920 PF08335 GlnD PII-uridylyltransferase M1S15_02920 PF03710 Glutamate-ammonia ligase adenylyltransferase M1S15_02925 PF01063 Amino-transferase class IV M1S15_02940 PF01522 Polysaccharide deacetylase M1S15_02945 PF00535 Glycosyl transferase family 2 M1S15_02950 PF13439 Glycosyltransferase Family 4 M1S15_02950 PF00534 Glycosyl transferases group 1 M1S15_02975 PF17101 Stealth protein CR1, conserved region 1 M1S15_02975 PF11380 Stealth protein CR2, conserved region 2 M1S15_02975 PF17102 Stealth protein CR3, conserved region 3 M1S15_02980 PF02938 GAD domain M1S15_02980 PF00152 tRNA synthetases class II (D, K and N) M1S15_02980 PF01336 OB-fold nucleic acid binding domain M1S15_02990 PF00593 TonB dependent receptor M1S15_02990 PF07715 TonB-dependent Receptor Plug Domain M1S15_03010 PF06146 Phosphate-starvation-inducible E M1S15_03015 PF02798 Glutathione S-transferase, N-terminal domain M1S15_03015 PF00043 Glutathione S-transferase, C-terminal domain M1S15_03020 PF03466 LysR substrate binding domain M1S15_03020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_03025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_03025 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_03025 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S15_03025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_03030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_03030 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_03030 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S15_03030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_03040 PF00672 HAMP domain M1S15_03040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_03040 PF00512 His Kinase A (phospho-acceptor) domain M1S15_03045 PF00486 Transcriptional regulatory protein, C terminal M1S15_03045 PF00072 Response regulator receiver domain M1S15_03050 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M1S15_03070 PF01923 Cobalamin adenosyltransferase M1S15_03075 PF07715 TonB-dependent Receptor Plug Domain M1S15_03075 PF00593 TonB dependent receptor M1S15_03080 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M1S15_03085 PF00291 Pyridoxal-phosphate dependent enzyme M1S15_03110 PF00290 Tryptophan synthase alpha chain M1S15_03115 PF01039 Carboxyl transferase domain M1S15_03120 PF02875 Mur ligase family, glutamate ligase domain M1S15_03120 PF08245 Mur ligase middle domain M1S15_03135 PF00753 Metallo-beta-lactamase superfamily M1S15_03140 PF00578 AhpC/TSA family M1S15_03140 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S15_03145 PF02810 SEC-C motif M1S15_03145 PF07517 SecA DEAD-like domain M1S15_03145 PF01043 SecA preprotein cross-linking domain M1S15_03145 PF07516 SecA Wing and Scaffold domain M1S15_03155 PF00083 Sugar (and other) transporter M1S15_03155 PF07690 Major Facilitator Superfamily M1S15_03160 PF03006 Haemolysin-III related M1S15_03185 PF00378 Enoyl-CoA hydratase/isomerase M1S15_03185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S15_03185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S15_03190 PF02803 Thiolase, C-terminal domain M1S15_03190 PF00108 Thiolase, N-terminal domain M1S15_03195 PF02311 AraC-like ligand binding domain M1S15_03195 PF12833 Helix-turn-helix domain M1S15_03200 PF02515 CoA-transferase family III M1S15_03205 PF04966 Carbohydrate-selective porin, OprB family M1S15_03210 PF01011 PQQ enzyme repeat M1S15_03215 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S15_03215 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S15_03225 PF00893 Small Multidrug Resistance protein M1S15_03235 PF00108 Thiolase, N-terminal domain M1S15_03235 PF02803 Thiolase, C-terminal domain M1S15_03245 PF00691 OmpA family M1S15_03245 PF13505 Outer membrane protein beta-barrel domain M1S15_03255 PF01139 tRNA-splicing ligase RtcB M1S15_03260 PF00324 Amino acid permease M1S15_03265 PF08468 Methyltransferase small domain N-terminal M1S15_03265 PF05175 Methyltransferase small domain M1S15_03270 PF00860 Permease family M1S15_03275 PF03144 Elongation factor Tu domain 2 M1S15_03275 PF00009 Elongation factor Tu GTP binding domain M1S15_03275 PF00679 Elongation factor G C-terminus M1S15_03280 PF01741 Large-conductance mechanosensitive channel, MscL M1S15_03295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M1S15_03295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M1S15_03295 PF06827 Zinc finger found in FPG and IleRS M1S15_03300 PF02245 Methylpurine-DNA glycosylase (MPG) M1S15_03320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S15_03335 PF13098 Thioredoxin-like domain M1S15_03335 PF10411 Disulfide bond isomerase protein N-terminus M1S15_03340 PF01571 Aminomethyltransferase folate-binding domain M1S15_03350 PF04343 Protein of unknown function, DUF488 M1S15_03355 PF08274 PhnA Zinc-Ribbon M1S15_03355 PF03831 PhnA domain M1S15_03360 PF07411 Domain of unknown function (DUF1508) M1S15_03365 PF03129 Anticodon binding domain M1S15_03365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S15_03365 PF04073 Aminoacyl-tRNA editing domain M1S15_03370 PF00873 AcrB/AcrD/AcrF family M1S15_03385 PF00072 Response regulator receiver domain M1S15_03390 PF00072 Response regulator receiver domain M1S15_03395 PF01584 CheW-like domain M1S15_03400 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M1S15_03400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M1S15_03405 PF00072 Response regulator receiver domain M1S15_03405 PF01627 Hpt domain M1S15_03405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_03405 PF01584 CheW-like domain M1S15_03415 PF01546 Peptidase family M20/M25/M40 M1S15_03415 PF07687 Peptidase dimerisation domain M1S15_03420 PF08085 Entericidin EcnA/B family M1S15_03430 PF04304 Protein of unknown function (DUF454) M1S15_03435 PF03734 L,D-transpeptidase catalytic domain M1S15_03435 PF17969 L,D-transpeptidase C-terminal domain M1S15_03475 PF00258 Flavodoxin M1S15_03475 PF00175 Oxidoreductase NAD-binding domain M1S15_03475 PF00667 FAD binding domain M1S15_03485 PF12805 FUSC-like inner membrane protein yccS M1S15_03490 PF07690 Major Facilitator Superfamily M1S15_03495 PF00881 Nitroreductase family M1S15_03510 PF01235 Sodium:alanine symporter family M1S15_03515 PF01734 Patatin-like phospholipase M1S15_03520 PF13291 ACT domain M1S15_03520 PF00291 Pyridoxal-phosphate dependent enzyme M1S15_03525 PF05992 SbmA/BacA-like family M1S15_03555 PF02934 GatB/GatE catalytic domain M1S15_03555 PF02637 GatB domain M1S15_03560 PF01425 Amidase M1S15_03565 PF02686 Glu-tRNAGln amidotransferase C subunit M1S15_03575 PF04085 rod shape-determining protein MreC M1S15_03580 PF04093 rod shape-determining protein MreD M1S15_03585 PF02545 Maf-like protein M1S15_03590 PF00575 S1 RNA binding domain M1S15_03590 PF10150 Ribonuclease E/G family M1S15_03600 PF06974 Protein of unknown function (DUF1298) M1S15_03600 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain M1S15_03605 PF01507 Phosphoadenosine phosphosulfate reductase family M1S15_03620 PF02525 Flavodoxin-like fold M1S15_03640 PF02673 Bacitracin resistance protein BacA M1S15_03645 PF12833 Helix-turn-helix domain M1S15_03645 PF06719 AraC-type transcriptional regulator N-terminus M1S15_03650 PF00550 Phosphopantetheine attachment site M1S15_03650 PF14765 Polyketide synthase dehydratase M1S15_03650 PF08659 KR domain M1S15_03650 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S15_03650 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S15_03650 PF16197 Ketoacyl-synthetase C-terminal extension M1S15_03650 PF00698 Acyl transferase domain M1S15_03650 PF08240 Alcohol dehydrogenase GroES-like domain M1S15_03650 PF08990 Erythronolide synthase docking M1S15_03650 PF09277 Erythronolide synthase, docking M1S15_03655 PF01965 DJ-1/PfpI family M1S15_03665 PF00324 Amino acid permease M1S15_03670 PF04303 PrpF protein M1S15_03675 PF00348 Polyprenyl synthetase M1S15_03680 PF04237 YjbR M1S15_03685 PF01145 SPFH domain / Band 7 family M1S15_03695 PF01734 Patatin-like phospholipase M1S15_03720 PF00072 Response regulator receiver domain M1S15_03720 PF00486 Transcriptional regulatory protein, C terminal M1S15_03725 PF08521 Two-component sensor kinase N-terminal M1S15_03725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_03725 PF00512 His Kinase A (phospho-acceptor) domain M1S15_03735 PF00909 Ammonium Transporter Family M1S15_03740 PF03466 LysR substrate binding domain M1S15_03740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_03760 PF00133 tRNA synthetases class I (I, L, M and V) M1S15_03760 PF10458 Valyl tRNA synthetase tRNA binding arm M1S15_03760 PF08264 Anticodon-binding domain of tRNA M1S15_03780 PF01906 Putative heavy-metal-binding M1S15_03785 PF01906 Putative heavy-metal-binding M1S15_03790 PF02321 Outer membrane efflux protein M1S15_03795 PF00873 AcrB/AcrD/AcrF family M1S15_03800 PF00529 HlyD membrane-fusion protein of T1SS M1S15_03800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S15_03805 PF01569 PAP2 superfamily M1S15_03815 PF00348 Polyprenyl synthetase M1S15_03825 PF00829 Ribosomal prokaryotic L21 protein M1S15_03830 PF01016 Ribosomal L27 protein M1S15_03835 PF03548 Outer membrane lipoprotein carrier protein LolA M1S15_03845 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S15_03845 PF02403 Seryl-tRNA synthetase N-terminal domain M1S15_03850 PF10414 Sirohaem synthase dimerisation region M1S15_03850 PF14824 Sirohaem biosynthesis protein central M1S15_03850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S15_03855 PF00588 SpoU rRNA Methylase family M1S15_03860 PF01638 HxlR-like helix-turn-helix M1S15_03865 PF03358 NADPH-dependent FMN reductase M1S15_03870 PF13520 Amino acid permease M1S15_03875 PF00465 Iron-containing alcohol dehydrogenase M1S15_03885 PF03099 Biotin/lipoate A/B protein ligase family M1S15_03890 PF04359 Protein of unknown function (DUF493) M1S15_03895 PF04539 Sigma-70 region 3 M1S15_03895 PF04542 Sigma-70 region 2 M1S15_03895 PF03979 Sigma-70 factor, region 1.1 M1S15_03895 PF04546 Sigma-70, non-essential region M1S15_03895 PF04545 Sigma-70, region 4 M1S15_03895 PF00140 Sigma-70 factor, region 1.2 M1S15_03915 PF17773 UPF0176 acylphosphatase like domain M1S15_03915 PF00581 Rhodanese-like domain M1S15_03925 PF00285 Citrate synthase, C-terminal domain M1S15_03930 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S15_03935 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S15_03940 PF00890 FAD binding domain M1S15_03940 PF02910 Fumarate reductase flavoprotein C-term M1S15_03945 PF13085 2Fe-2S iron-sulfur cluster binding domain M1S15_03960 PF02779 Transketolase, pyrimidine binding domain M1S15_03960 PF16078 2-oxoglutarate dehydrogenase N-terminus M1S15_03960 PF00676 Dehydrogenase E1 component M1S15_03960 PF16870 2-oxoglutarate dehydrogenase C-terminal M1S15_03965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S15_03965 PF00364 Biotin-requiring enzyme M1S15_03965 PF02817 e3 binding domain M1S15_03970 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_03970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S15_03975 PF08442 ATP-grasp domain M1S15_03975 PF00549 CoA-ligase M1S15_03980 PF02629 CoA binding domain M1S15_03980 PF00549 CoA-ligase M1S15_03985 PF00579 tRNA synthetases class I (W and Y) M1S15_03990 PF05661 Protein of unknown function (DUF808) M1S15_03995 PF04228 Putative neutral zinc metallopeptidase M1S15_04000 PF00999 Sodium/hydrogen exchanger family M1S15_04025 PF09587 Bacterial capsule synthesis protein PGA_cap M1S15_04035 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S15_04040 PF00582 Universal stress protein family M1S15_04045 PF00132 Bacterial transferase hexapeptide (six repeats) M1S15_04050 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S15_04050 PF03449 Transcription elongation factor, N-terminal M1S15_04055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S15_04055 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M1S15_04055 PF02142 MGS-like domain M1S15_04060 PF00117 Glutamine amidotransferase class-I M1S15_04060 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M1S15_04075 PF01985 CRS1 / YhbY (CRM) domain M1S15_04080 PF01728 FtsJ-like methyltransferase M1S15_04085 PF00004 ATPase family associated with various cellular activities (AAA) M1S15_04085 PF17862 AAA+ lid domain M1S15_04085 PF06480 FtsH Extracellular M1S15_04085 PF01434 Peptidase family M41 M1S15_04090 PF00809 Pterin binding enzyme M1S15_04110 PF09423 PhoD-like phosphatase M1S15_04110 PF16655 PhoD-like phosphatase, N-terminal domain M1S15_04125 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M1S15_04125 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M1S15_04140 PF00083 Sugar (and other) transporter M1S15_04145 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1S15_04145 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1S15_04150 PF01266 FAD dependent oxidoreductase M1S15_04150 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M1S15_04155 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1S15_04155 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1S15_04160 PF00781 Diacylglycerol kinase catalytic domain M1S15_04165 PF00149 Calcineurin-like phosphoesterase M1S15_04175 PF00166 Chaperonin 10 Kd subunit M1S15_04180 PF00118 TCP-1/cpn60 chaperonin family M1S15_04185 PF01219 Prokaryotic diacylglycerol kinase M1S15_04195 PF03009 Glycerophosphoryl diester phosphodiesterase family M1S15_04200 PF00873 AcrB/AcrD/AcrF family M1S15_04210 PF01435 Peptidase family M48 M1S15_04215 PF01464 Transglycosylase SLT domain M1S15_04220 PF01171 PP-loop family M1S15_04230 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S15_04230 PF01464 Transglycosylase SLT domain M1S15_04235 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S15_04235 PF03449 Transcription elongation factor, N-terminal M1S15_04250 PF00975 Thioesterase domain M1S15_04250 PF00550 Phosphopantetheine attachment site M1S15_04250 PF13193 AMP-binding enzyme C-terminal domain M1S15_04250 PF00501 AMP-binding enzyme M1S15_04250 PF00668 Condensation domain M1S15_04280 PF00881 Nitroreductase family M1S15_04295 PF02595 Glycerate kinase family M1S15_04300 PF00384 Molybdopterin oxidoreductase M1S15_04305 PF02634 FdhD/NarQ family M1S15_04310 PF06803 Protein of unknown function (DUF1232) M1S15_04315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S15_04315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S15_04315 PF11890 Domain of unknown function (DUF3410) M1S15_04320 PF00152 tRNA synthetases class II (D, K and N) M1S15_04330 PF18073 Rubredoxin metal binding domain M1S15_04335 PF00324 Amino acid permease M1S15_04345 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M1S15_04345 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M1S15_04350 PF01678 Diaminopimelate epimerase M1S15_04355 PF01810 LysE type translocator M1S15_04360 PF02899 Phage integrase, N-terminal SAM-like domain M1S15_04360 PF00589 Phage integrase family M1S15_04365 PF01012 Electron transfer flavoprotein domain M1S15_04370 PF01012 Electron transfer flavoprotein domain M1S15_04370 PF00766 Electron transfer flavoprotein FAD-binding domain M1S15_04375 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S15_04375 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S15_04390 PF00535 Glycosyl transferase family 2 M1S15_04410 PF13533 Biotin-lipoyl like M1S15_04420 PF00266 Aminotransferase class-V M1S15_04435 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M1S15_04445 PF02687 FtsX-like permease family M1S15_04445 PF12704 MacB-like periplasmic core domain M1S15_04450 PF00005 ABC transporter M1S15_04455 PF00753 Metallo-beta-lactamase superfamily M1S15_04455 PF13567 Domain of unknown function (DUF4131) M1S15_04455 PF03772 Competence protein M1S15_04465 PF06965 Na+/H+ antiporter 1 M1S15_04465 PF01343 Peptidase family S49 M1S15_04470 PF12697 Alpha/beta hydrolase family M1S15_04475 PF00551 Formyl transferase M1S15_04480 PF00586 AIR synthase related protein, N-terminal domain M1S15_04480 PF02769 AIR synthase related protein, C-terminal domain M1S15_04485 PF01594 AI-2E family transporter M1S15_04490 PF11638 DnaA N-terminal domain M1S15_04490 PF00308 Bacterial dnaA protein M1S15_04490 PF08299 Bacterial dnaA protein helix-turn-helix M1S15_04520 PF00588 SpoU rRNA Methylase family M1S15_04520 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S15_04525 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M1S15_04535 PF00691 OmpA family M1S15_04540 PF07676 WD40-like Beta Propeller Repeat M1S15_04540 PF04052 TolB amino-terminal domain M1S15_04550 PF02472 Biopolymer transport protein ExbD/TolR M1S15_04555 PF01618 MotA/TolQ/ExbB proton channel family M1S15_04560 PF03061 Thioesterase superfamily M1S15_04565 PF07687 Peptidase dimerisation domain M1S15_04565 PF01546 Peptidase family M20/M25/M40 M1S15_04570 PF17864 RuvB AAA lid domain M1S15_04570 PF05491 RuvB C-terminal winged helix domain M1S15_04570 PF05496 Holliday junction DNA helicase RuvB P-loop domain M1S15_04575 PF07499 RuvA, C-terminal domain M1S15_04575 PF01330 RuvA N terminal domain M1S15_04580 PF01966 HD domain M1S15_04585 PF02769 AIR synthase related protein, C-terminal domain M1S15_04585 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M1S15_04585 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M1S15_04590 PF07690 Major Facilitator Superfamily M1S15_04595 PF01784 NIF3 (NGG1p interacting factor 3) M1S15_04600 PF00378 Enoyl-CoA hydratase/isomerase M1S15_04605 PF01467 Cytidylyltransferase-like M1S15_04605 PF00293 NUDIX domain M1S15_04615 PF00578 AhpC/TSA family M1S15_04630 PF06508 Queuosine biosynthesis protein QueC M1S15_04640 PF00132 Bacterial transferase hexapeptide (six repeats) M1S15_04640 PF14602 Hexapeptide repeat of succinyl-transferase M1S15_04640 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M1S15_04650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_04650 PF03466 LysR substrate binding domain M1S15_04655 PF00005 ABC transporter M1S15_04655 PF12857 TOBE-like domain M1S15_04660 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_04665 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_04680 PF01063 Amino-transferase class IV M1S15_04685 PF02618 YceG-like family M1S15_04690 PF02223 Thymidylate kinase M1S15_04700 PF00890 FAD binding domain M1S15_04700 PF02910 Fumarate reductase flavoprotein C-term M1S15_04705 PF13180 PDZ domain M1S15_04715 PF00679 Elongation factor G C-terminus M1S15_04715 PF00009 Elongation factor Tu GTP binding domain M1S15_04715 PF03144 Elongation factor Tu domain 2 M1S15_04715 PF06421 GTP-binding protein LepA C-terminus M1S15_04720 PF10502 Signal peptidase, peptidase S26 M1S15_04730 PF00035 Double-stranded RNA binding motif M1S15_04730 PF14622 Ribonuclease-III-like M1S15_04735 PF07650 KH domain M1S15_04735 PF01926 50S ribosome-binding GTPase M1S15_04745 PF11967 Recombination protein O N terminal M1S15_04745 PF02565 Recombination protein O C terminal M1S15_04750 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M1S15_04755 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M1S15_04760 PF00106 short chain dehydrogenase M1S15_04790 PF00155 Aminotransferase class I and II M1S15_04800 PF17151 Periplasmic sensor domain M1S15_04800 PF00990 Diguanylate cyclase, GGDEF domain M1S15_04810 PF17757 UvrB interaction domain M1S15_04810 PF02151 UvrB/uvrC motif M1S15_04810 PF04851 Type III restriction enzyme, res subunit M1S15_04810 PF00271 Helicase conserved C-terminal domain M1S15_04810 PF12344 Ultra-violet resistance protein B M1S15_04820 PF00892 EamA-like transporter family M1S15_04825 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S15_04825 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S15_04840 PF01926 50S ribosome-binding GTPase M1S15_04840 PF01018 GTP1/OBG M1S15_04845 PF00696 Amino acid kinase family M1S15_04845 PF01472 PUA domain M1S15_04855 PF07759 Protein of unknown function (DUF1615) M1S15_04860 PF01207 Dihydrouridine synthase (Dus) M1S15_04865 PF03060 Nitronate monooxygenase M1S15_04880 PF02350 UDP-N-acetylglucosamine 2-epimerase M1S15_04920 PF03441 FAD binding domain of DNA photolyase M1S15_04920 PF00875 DNA photolyase M1S15_04925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S15_04945 PF03971 Monomeric isocitrate dehydrogenase M1S15_04950 PF00849 RNA pseudouridylate synthase M1S15_04955 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S15_04975 PF06779 Uncharacterised MFS-type transporter YbfB M1S15_04980 PF03466 LysR substrate binding domain M1S15_04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_04985 PF00375 Sodium:dicarboxylate symporter family M1S15_04990 PF02567 Phenazine biosynthesis-like protein M1S15_04995 PF05193 Peptidase M16 inactive domain M1S15_04995 PF00675 Insulinase (Peptidase family M16) M1S15_05020 PF02581 Thiamine monophosphate synthase M1S15_05025 PF00202 Aminotransferase class-III M1S15_05035 PF00849 RNA pseudouridylate synthase M1S15_05040 PF00176 SNF2 family N-terminal domain M1S15_05040 PF18339 RapA N-terminal Tudor like domain 1 M1S15_05040 PF18337 RapA N-terminal Tudor like domain M1S15_05040 PF00271 Helicase conserved C-terminal domain M1S15_05040 PF12137 RNA polymerase recycling family C-terminal M1S15_05050 PF00440 Bacterial regulatory proteins, tetR family M1S15_05055 PF00175 Oxidoreductase NAD-binding domain M1S15_05055 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S15_05055 PF00970 Oxidoreductase FAD-binding domain M1S15_05060 PF00487 Fatty acid desaturase M1S15_05070 PF17754 MftR C-terminal domain M1S15_05070 PF00440 Bacterial regulatory proteins, tetR family M1S15_05080 PF00202 Aminotransferase class-III M1S15_05085 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S15_05090 PF00171 Aldehyde dehydrogenase family M1S15_05095 PF01037 Lrp/AsnC ligand binding domain M1S15_05100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S15_05100 PF00205 Thiamine pyrophosphate enzyme, central domain M1S15_05100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S15_05105 PF00324 Amino acid permease M1S15_05110 PF12849 PBP superfamily domain M1S15_05115 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_05120 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_05125 PF00005 ABC transporter M1S15_05130 PF01343 Peptidase family S49 M1S15_05130 PF08496 Peptidase family S49 N-terminal M1S15_05145 PF08328 Adenylosuccinate lyase C-terminal M1S15_05145 PF00206 Lyase M1S15_05150 PF04356 Protein of unknown function (DUF489) M1S15_05160 PF00293 NUDIX domain M1S15_05160 PF13344 Haloacid dehalogenase-like hydrolase M1S15_05165 PF00132 Bacterial transferase hexapeptide (six repeats) M1S15_05170 PF07943 Penicillin-binding protein 5, C-terminal domain M1S15_05170 PF00768 D-alanyl-D-alanine carboxypeptidase M1S15_05185 PF01975 Survival protein SurE M1S15_05190 PF01476 LysM domain M1S15_05190 PF01551 Peptidase family M23 M1S15_05195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_05195 PF03466 LysR substrate binding domain M1S15_05200 PF13654 AAA domain M1S15_05200 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S15_05205 PF07690 Major Facilitator Superfamily M1S15_05210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S15_05215 PF13593 SBF-like CPA transporter family (DUF4137) M1S15_05220 PF01197 Ribosomal protein L31 M1S15_05235 PF04055 Radical SAM superfamily M1S15_05240 PF01132 Elongation factor P (EF-P) OB domain M1S15_05240 PF08207 Elongation factor P (EF-P) KOW-like domain M1S15_05240 PF09285 Elongation factor P, C-terminal M1S15_05245 PF13722 5TM C-terminal transporter carbon starvation CstA M1S15_05245 PF02554 Carbon starvation protein CstA M1S15_05250 PF04328 Selenoprotein, putative M1S15_05285 PF17853 GGDEF-like domain M1S15_05285 PF13556 PucR C-terminal helix-turn-helix domain M1S15_05285 PF06018 CodY GAF-like domain M1S15_05300 PF00171 Aldehyde dehydrogenase family M1S15_05305 PF00324 Amino acid permease M1S15_05310 PF03466 LysR substrate binding domain M1S15_05310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_05315 PF02028 BCCT, betaine/carnitine/choline family transporter M1S15_05320 PF02028 BCCT, betaine/carnitine/choline family transporter M1S15_05325 PF00355 Rieske [2Fe-2S] domain M1S15_05325 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S15_05330 PF00171 Aldehyde dehydrogenase family M1S15_05340 PF18113 Rubredoxin binding C-terminal domain M1S15_05340 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_05345 PF01266 FAD dependent oxidoreductase M1S15_05345 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S15_05365 PF00892 EamA-like transporter family M1S15_05375 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M1S15_05380 PF00083 Sugar (and other) transporter M1S15_05385 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S15_05385 PF13378 Enolase C-terminal domain-like M1S15_05390 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S15_05390 PF16197 Ketoacyl-synthetase C-terminal extension M1S15_05390 PF09277 Erythronolide synthase, docking M1S15_05390 PF08990 Erythronolide synthase docking M1S15_05390 PF08240 Alcohol dehydrogenase GroES-like domain M1S15_05390 PF00698 Acyl transferase domain M1S15_05390 PF08659 KR domain M1S15_05390 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S15_05390 PF14765 Polyketide synthase dehydratase M1S15_05390 PF00550 Phosphopantetheine attachment site M1S15_05395 PF00440 Bacterial regulatory proteins, tetR family M1S15_05415 PF02678 Pirin M1S15_05415 PF17954 Quercetinase C-terminal cupin domain M1S15_05425 PF08348 YheO-like PAS domain M1S15_05425 PF13309 HTH domain M1S15_05435 PF00550 Phosphopantetheine attachment site M1S15_05435 PF00668 Condensation domain M1S15_05435 PF13193 AMP-binding enzyme C-terminal domain M1S15_05435 PF00501 AMP-binding enzyme M1S15_05440 PF13193 AMP-binding enzyme C-terminal domain M1S15_05440 PF00668 Condensation domain M1S15_05440 PF00501 AMP-binding enzyme M1S15_05440 PF00975 Thioesterase domain M1S15_05440 PF00550 Phosphopantetheine attachment site M1S15_05445 PF01032 FecCD transport family M1S15_05450 PF01032 FecCD transport family M1S15_05455 PF00005 ABC transporter M1S15_05460 PF01497 Periplasmic binding protein M1S15_05465 PF00593 TonB dependent receptor M1S15_05465 PF07715 TonB-dependent Receptor Plug Domain M1S15_05470 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S15_05475 PF00668 Condensation domain M1S15_05475 PF00501 AMP-binding enzyme M1S15_05475 PF00550 Phosphopantetheine attachment site M1S15_05480 PF00501 AMP-binding enzyme M1S15_05480 PF13193 AMP-binding enzyme C-terminal domain M1S15_05485 PF00857 Isochorismatase family M1S15_05485 PF00550 Phosphopantetheine attachment site M1S15_05490 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S15_05500 PF00005 ABC transporter M1S15_05505 PF00005 ABC transporter M1S15_05510 PF00975 Thioesterase domain M1S15_05520 PF00425 chorismate binding enzyme M1S15_05530 PF01208 Uroporphyrinogen decarboxylase (URO-D) M1S15_05535 PF05675 Protein of unknown function (DUF817) M1S15_05550 PF00144 Beta-lactamase M1S15_05560 PF01227 GTP cyclohydrolase I M1S15_05565 PF01799 [2Fe-2S] binding domain M1S15_05565 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S15_05570 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M1S15_05570 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M1S15_05585 PF00218 Indole-3-glycerol phosphate synthase M1S15_05590 PF00591 Glycosyl transferase family, a/b domain M1S15_05590 PF02885 Glycosyl transferase family, helical bundle domain M1S15_05595 PF07715 TonB-dependent Receptor Plug Domain M1S15_05595 PF00593 TonB dependent receptor M1S15_05600 PF11838 ERAP1-like C-terminal domain M1S15_05600 PF01433 Peptidase family M1 domain M1S15_05605 PF00117 Glutamine amidotransferase class-I M1S15_05615 PF00854 POT family M1S15_05620 PF00120 Glutamine synthetase, catalytic domain M1S15_05620 PF03951 Glutamine synthetase, beta-Grasp domain M1S15_05625 PF04345 Chorismate lyase M1S15_05630 PF01040 UbiA prenyltransferase family M1S15_05665 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M1S15_05665 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M1S15_05670 PF01784 NIF3 (NGG1p interacting factor 3) M1S15_05675 PF13180 PDZ domain M1S15_05680 PF01743 Poly A polymerase head domain M1S15_05680 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S15_05685 PF01515 Phosphate acetyl/butaryl transferase M1S15_05685 PF00390 Malic enzyme, N-terminal domain M1S15_05685 PF03949 Malic enzyme, NAD binding domain M1S15_05690 PF00563 EAL domain M1S15_05690 PF00990 Diguanylate cyclase, GGDEF domain M1S15_05690 PF03707 Bacterial signalling protein N terminal repeat M1S15_05695 PF04452 RNA methyltransferase M1S15_05700 PF02219 Methylenetetrahydrofolate reductase M1S15_05705 PF05221 S-adenosyl-L-homocysteine hydrolase M1S15_05705 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M1S15_05720 PF09317 Domain of unknown function (DUF1974) M1S15_05720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_05720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_05725 PF04055 Radical SAM superfamily M1S15_05730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S15_05730 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_05740 PF07690 Major Facilitator Superfamily M1S15_05750 PF00557 Metallopeptidase family M24 M1S15_05755 PF00318 Ribosomal protein S2 M1S15_05760 PF00889 Elongation factor TS M1S15_05770 PF12833 Helix-turn-helix domain M1S15_05790 PF05036 Sporulation related domain M1S15_05790 PF03330 Lytic transglycolase M1S15_05795 PF13406 Transglycosylase SLT domain M1S15_05800 PF01098 Cell cycle protein M1S15_05810 PF14489 QueF-like protein M1S15_05810 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M1S15_05815 PF01061 ABC-2 type transporter M1S15_05820 PF00005 ABC transporter M1S15_05850 PF00464 Serine hydroxymethyltransferase M1S15_05855 PF02321 Outer membrane efflux protein M1S15_05860 PF00873 AcrB/AcrD/AcrF family M1S15_05865 PF13533 Biotin-lipoyl like M1S15_05870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_05870 PF03466 LysR substrate binding domain M1S15_05875 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S15_05880 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_05885 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_05890 PF00005 ABC transporter M1S15_05895 PF00893 Small Multidrug Resistance protein M1S15_05900 PF00037 4Fe-4S binding domain M1S15_05905 PF01136 Peptidase family U32 M1S15_05905 PF16325 Peptidase family U32 C-terminal domain M1S15_05910 PF00155 Aminotransferase class I and II M1S15_05910 PF00392 Bacterial regulatory proteins, gntR family M1S15_05915 PF02567 Phenazine biosynthesis-like protein M1S15_05920 PF00970 Oxidoreductase FAD-binding domain M1S15_05920 PF00175 Oxidoreductase NAD-binding domain M1S15_05925 PF01980 tRNA-methyltransferase O M1S15_05925 PF18389 TrmO C-terminal domain M1S15_05935 PF00437 Type II/IV secretion system protein M1S15_05935 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S15_05945 PF00486 Transcriptional regulatory protein, C terminal M1S15_05945 PF00072 Response regulator receiver domain M1S15_05950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_05950 PF08521 Two-component sensor kinase N-terminal M1S15_05950 PF00512 His Kinase A (phospho-acceptor) domain M1S15_05960 PF00293 NUDIX domain M1S15_05970 PF00912 Transglycosylase M1S15_05970 PF00905 Penicillin binding protein transpeptidase domain M1S15_05970 PF14814 Bifunctional transglycosylase second domain M1S15_05975 PF01513 ATP-NAD kinase M1S15_05980 PF07023 Protein of unknown function (DUF1315) M1S15_05985 PF02885 Glycosyl transferase family, helical bundle domain M1S15_05985 PF00591 Glycosyl transferase family, a/b domain M1S15_05990 PF00375 Sodium:dicarboxylate symporter family M1S15_05995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_05995 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_05995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_06000 PF00756 Putative esterase M1S15_06005 PF01817 Chorismate mutase type II M1S15_06005 PF00800 Prephenate dehydratase M1S15_06005 PF01842 ACT domain M1S15_06010 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S15_06020 PF01546 Peptidase family M20/M25/M40 M1S15_06020 PF07687 Peptidase dimerisation domain M1S15_06025 PF12706 Beta-lactamase superfamily domain M1S15_06035 PF03883 Peroxide stress protein YaaA M1S15_06045 PF05690 Thiazole biosynthesis protein ThiG M1S15_06055 PF04241 Protein of unknown function (DUF423) M1S15_06060 PF00140 Sigma-70 factor, region 1.2 M1S15_06060 PF04542 Sigma-70 region 2 M1S15_06060 PF04545 Sigma-70, region 4 M1S15_06075 PF00313 'Cold-shock' DNA-binding domain M1S15_06080 PF00271 Helicase conserved C-terminal domain M1S15_06080 PF00270 DEAD/DEAH box helicase M1S15_06090 PF00881 Nitroreductase family M1S15_06095 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M1S15_06095 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M1S15_06115 PF01180 Dihydroorotate dehydrogenase M1S15_06120 PF02674 Colicin V production protein M1S15_06125 PF00156 Phosphoribosyl transferase domain M1S15_06140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S15_06140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S15_06145 PF01435 Peptidase family M48 M1S15_06150 PF09424 Yqey-like protein M1S15_06155 PF01165 Ribosomal protein S21 M1S15_06160 PF00814 Glycoprotease family M1S15_06180 PF00069 Protein kinase domain M1S15_06205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_06205 PF03466 LysR substrate binding domain M1S15_06210 PF00202 Aminotransferase class-III M1S15_06215 PF00171 Aldehyde dehydrogenase family M1S15_06220 PF00324 Amino acid permease M1S15_06250 PF04076 Bacterial OB fold (BOF) protein M1S15_06275 PF00561 alpha/beta hydrolase fold M1S15_06280 PF03616 Sodium/glutamate symporter M1S15_06290 PF00392 Bacterial regulatory proteins, gntR family M1S15_06290 PF07729 FCD domain M1S15_06340 PF00083 Sugar (and other) transporter M1S15_06340 PF08946 Osmosensory transporter coiled coil M1S15_06365 PF00155 Aminotransferase class I and II M1S15_06370 PF06826 Predicted Permease Membrane Region M1S15_06370 PF02080 TrkA-C domain M1S15_06380 PF04403 Paraquat-inducible protein A M1S15_06390 PF13610 DDE domain M1S15_06395 PF00132 Bacterial transferase hexapeptide (six repeats) M1S15_06405 PF13610 DDE domain M1S15_06415 PF00809 Pterin binding enzyme M1S15_06420 PF00893 Small Multidrug Resistance protein M1S15_06425 PF13610 DDE domain M1S15_06440 PF01177 Asp/Glu/Hydantoin racemase M1S15_06445 PF00892 EamA-like transporter family M1S15_06450 PF07995 Glucose / Sorbosone dehydrogenase M1S15_06460 PF13610 DDE domain M1S15_06490 PF07091 Ribosomal RNA methyltransferase (FmrO) M1S15_06505 PF00005 ABC transporter M1S15_06505 PF12848 ABC transporter M1S15_06510 PF01636 Phosphotransferase enzyme family M1S15_06520 PF03050 Transposase IS66 family M1S15_06520 PF13817 IS66 C-terminal element M1S15_06520 PF13007 Transposase C of IS166 homeodomain M1S15_06520 PF13005 zinc-finger binding domain of transposase IS66 M1S15_06560 PF00375 Sodium:dicarboxylate symporter family M1S15_06570 PF16123 Hydroxyacylglutathione hydrolase C-terminus M1S15_06570 PF00753 Metallo-beta-lactamase superfamily M1S15_06575 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_06580 PF00005 ABC transporter M1S15_06580 PF09383 NIL domain M1S15_06585 PF03180 NLPA lipoprotein M1S15_06590 PF02843 Phosphoribosylglycinamide synthetase, C domain M1S15_06590 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M1S15_06590 PF02844 Phosphoribosylglycinamide synthetase, N domain M1S15_06595 PF02142 MGS-like domain M1S15_06595 PF01808 AICARFT/IMPCHase bienzyme M1S15_06600 PF02954 Bacterial regulatory protein, Fis family M1S15_06620 PF13932 GidA associated domain M1S15_06620 PF01134 Glucose inhibited division protein A M1S15_06630 PF14403 Circularly permuted ATP-grasp type 2 M1S15_06640 PF08379 Bacterial transglutaminase-like N-terminal region M1S15_06640 PF01841 Transglutaminase-like superfamily M1S15_06650 PF00842 Alanine racemase, C-terminal domain M1S15_06650 PF01168 Alanine racemase, N-terminal domain M1S15_06655 PF00772 DnaB-like helicase N terminal domain M1S15_06655 PF03796 DnaB-like helicase C terminal domain M1S15_06660 PF03948 Ribosomal protein L9, C-terminal domain M1S15_06660 PF01281 Ribosomal protein L9, N-terminal domain M1S15_06665 PF01084 Ribosomal protein S18 M1S15_06670 PF01250 Ribosomal protein S6 M1S15_06675 PF01040 UbiA prenyltransferase family M1S15_06680 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M1S15_06685 PF00510 Cytochrome c oxidase subunit III M1S15_06690 PF00115 Cytochrome C and Quinol oxidase polypeptide I M1S15_06695 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M1S15_06695 PF06481 COX Aromatic Rich Motif M1S15_06705 PF00391 PEP-utilising enzyme, mobile domain M1S15_06705 PF02896 PEP-utilising enzyme, TIM barrel domain M1S15_06705 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M1S15_06710 PF03618 Kinase/pyrophosphorylase M1S15_06720 PF14883 Hypothetical glycosyl hydrolase family 13 M1S15_06720 PF01522 Polysaccharide deacetylase M1S15_06725 PF00535 Glycosyl transferase family 2 M1S15_06730 PF13994 PgaD-like protein M1S15_06740 PF00296 Luciferase-like monooxygenase M1S15_06755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_06755 PF03466 LysR substrate binding domain M1S15_06765 PF03462 PCRF domain M1S15_06765 PF00472 RF-1 domain M1S15_06770 PF13847 Methyltransferase domain M1S15_06770 PF17827 PrmC N-terminal domain M1S15_06775 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_06780 PF09084 NMT1/THI5 like M1S15_06785 PF12833 Helix-turn-helix domain M1S15_06790 PF00106 short chain dehydrogenase M1S15_06795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_06795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_06795 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_06800 PF00501 AMP-binding enzyme M1S15_06800 PF13193 AMP-binding enzyme C-terminal domain M1S15_06805 PF01613 Flavin reductase like domain M1S15_06810 PF00899 ThiF family M1S15_06815 PF03109 ABC1 family M1S15_06830 PF03814 Potassium-transporting ATPase A subunit M1S15_06840 PF02669 K+-transporting ATPase, c chain M1S15_06845 PF13493 Domain of unknown function (DUF4118) M1S15_06845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_06845 PF00512 His Kinase A (phospho-acceptor) domain M1S15_06845 PF02702 Osmosensitive K+ channel His kinase sensor domain M1S15_06850 PF00072 Response regulator receiver domain M1S15_06850 PF00486 Transcriptional regulatory protein, C terminal M1S15_06855 PF00120 Glutamine synthetase, catalytic domain M1S15_06865 PF03232 Ubiquinone biosynthesis protein COQ7 M1S15_06870 PF07690 Major Facilitator Superfamily M1S15_06875 PF01103 Surface antigen M1S15_06875 PF07244 Surface antigen variable number repeat M1S15_06875 PF17243 POTRA domain TamA domain 1 M1S15_06890 PF00330 Aconitase family (aconitate hydratase) M1S15_06890 PF06434 Aconitate hydratase 2 N-terminus M1S15_06890 PF11791 Aconitate B N-terminal domain M1S15_06900 PF00027 Cyclic nucleotide-binding domain M1S15_06900 PF00520 Ion transport protein M1S15_06905 PF07690 Major Facilitator Superfamily M1S15_06920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_06920 PF03466 LysR substrate binding domain M1S15_06925 PF04284 Protein of unknown function (DUF441) M1S15_06935 PF01479 S4 domain M1S15_06935 PF00849 RNA pseudouridylate synthase M1S15_06950 PF01479 S4 domain M1S15_06950 PF00849 RNA pseudouridylate synthase M1S15_06955 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M1S15_06960 PF08676 MutL C terminal dimerisation domain M1S15_06960 PF01119 DNA mismatch repair protein, C-terminal domain M1S15_06970 PF17209 Hfq protein M1S15_06980 PF00881 Nitroreductase family M1S15_06990 PF00149 Calcineurin-like phosphoesterase M1S15_06995 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S15_07000 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S15_07000 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M1S15_07005 PF02540 NAD synthase M1S15_07005 PF00117 Glutamine amidotransferase class-I M1S15_07005 PF00958 GMP synthase C terminal domain M1S15_07010 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M1S15_07015 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M1S15_07020 PF13520 Amino acid permease M1S15_07025 PF00171 Aldehyde dehydrogenase family M1S15_07040 PF00465 Iron-containing alcohol dehydrogenase M1S15_07045 PF05970 PIF1-like helicase M1S15_07045 PF14493 Helix-turn-helix domain M1S15_07055 PF06445 GyrI-like small molecule binding domain M1S15_07060 PF02110 Hydroxyethylthiazole kinase family M1S15_07075 PF01433 Peptidase family M1 domain M1S15_07075 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M1S15_07075 PF11940 Domain of unknown function (DUF3458) Ig-like fold M1S15_07085 PF00106 short chain dehydrogenase M1S15_07095 PF01817 Chorismate mutase type II M1S15_07100 PF01037 Lrp/AsnC ligand binding domain M1S15_07115 PF00440 Bacterial regulatory proteins, tetR family M1S15_07120 PF07715 TonB-dependent Receptor Plug Domain M1S15_07120 PF00593 TonB dependent receptor M1S15_07125 PF00924 Mechanosensitive ion channel M1S15_07165 PF07715 TonB-dependent Receptor Plug Domain M1S15_07165 PF00593 TonB dependent receptor M1S15_07185 PF12848 ABC transporter M1S15_07185 PF00005 ABC transporter M1S15_07190 PF00582 Universal stress protein family M1S15_07215 PF00689 Cation transporting ATPase, C-terminus M1S15_07215 PF00690 Cation transporter/ATPase, N-terminus M1S15_07220 PF02308 MgtC family M1S15_07225 PF03594 Benzoate membrane transport protein M1S15_07230 PF01037 Lrp/AsnC ligand binding domain M1S15_07235 PF01810 LysE type translocator M1S15_07240 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1S15_07245 PF03466 LysR substrate binding domain M1S15_07245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_07255 PF02803 Thiolase, C-terminal domain M1S15_07255 PF00108 Thiolase, N-terminal domain M1S15_07265 PF01575 MaoC like domain M1S15_07270 PF00144 Beta-lactamase M1S15_07280 PF07690 Major Facilitator Superfamily M1S15_07285 PF12169 DNA polymerase III subunits gamma and tau domain III M1S15_07285 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M1S15_07285 PF12170 DNA polymerase III tau subunit V interacting with alpha M1S15_07290 PF04185 Phosphoesterase family M1S15_07290 PF05506 Domain of unknown function (DUF756) M1S15_07295 PF03061 Thioesterase superfamily M1S15_07300 PF00465 Iron-containing alcohol dehydrogenase M1S15_07310 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S15_07315 PF01565 FAD binding domain M1S15_07315 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M1S15_07330 PF01645 Conserved region in glutamate synthase M1S15_07660 PF12832 MFS_1 like family M1S15_07670 PF00289 Biotin carboxylase, N-terminal domain M1S15_07670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S15_07670 PF02785 Biotin carboxylase C-terminal domain M1S15_07675 PF00364 Biotin-requiring enzyme M1S15_07680 PF01220 Dehydroquinase class II M1S15_07685 PF00817 impB/mucB/samB family M1S15_07685 PF13438 Domain of unknown function (DUF4113) M1S15_07685 PF11799 impB/mucB/samB family C-terminal domain M1S15_07695 PF00005 ABC transporter M1S15_07700 PF00072 Response regulator receiver domain M1S15_07700 PF00486 Transcriptional regulatory protein, C terminal M1S15_07710 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S15_07710 PF04324 BFD-like [2Fe-2S] binding domain M1S15_07710 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S15_07710 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S15_07710 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_07710 PF13806 Rieske-like [2Fe-2S] domain M1S15_07715 PF04324 BFD-like [2Fe-2S] binding domain M1S15_07715 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S15_07715 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S15_07715 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_07715 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S15_07720 PF00384 Molybdopterin oxidoreductase M1S15_07720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S15_07720 PF01568 Molydopterin dinucleotide binding domain M1S15_07720 PF04324 BFD-like [2Fe-2S] binding domain M1S15_07725 PF12804 MobA-like NTP transferase domain M1S15_07730 PF01568 Molydopterin dinucleotide binding domain M1S15_07730 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S15_07730 PF00384 Molybdopterin oxidoreductase M1S15_07735 PF06463 Molybdenum Cofactor Synthesis C M1S15_07735 PF04055 Radical SAM superfamily M1S15_07745 PF02391 MoaE protein M1S15_07750 PF01967 MoaC family M1S15_07750 PF00994 Probable molybdopterin binding domain M1S15_07755 PF03453 MoeA N-terminal region (domain I and II) M1S15_07755 PF03454 MoeA C-terminal region (domain IV) M1S15_07755 PF00994 Probable molybdopterin binding domain M1S15_07760 PF01638 HxlR-like helix-turn-helix M1S15_07765 PF00392 Bacterial regulatory proteins, gntR family M1S15_07765 PF00155 Aminotransferase class I and II M1S15_07770 PF00892 EamA-like transporter family M1S15_07790 PF02635 DsrE/DsrF-like family M1S15_07795 PF16363 GDP-mannose 4,6 dehydratase M1S15_07800 PF10415 Fumarase C C-terminus M1S15_07800 PF00206 Lyase M1S15_07820 PF01266 FAD dependent oxidoreductase M1S15_07830 PF02542 YgbB family M1S15_07840 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S15_07840 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S15_07860 PF02954 Bacterial regulatory protein, Fis family M1S15_07860 PF00072 Response regulator receiver domain M1S15_07860 PF00158 Sigma-54 interaction domain M1S15_07865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_07865 PF00512 His Kinase A (phospho-acceptor) domain M1S15_07865 PF00989 PAS fold M1S15_07870 PF00919 Uncharacterized protein family UPF0004 M1S15_07870 PF18693 TRAM domain M1S15_07870 PF04055 Radical SAM superfamily M1S15_07875 PF00696 Amino acid kinase family M1S15_07880 PF01765 Ribosome recycling factor M1S15_07885 PF01255 Putative undecaprenyl diphosphate synthase M1S15_07895 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M1S15_07895 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M1S15_07895 PF13288 DXP reductoisomerase C-terminal domain M1S15_07900 PF02163 Peptidase family M50 M1S15_07900 PF17820 PDZ domain M1S15_07900 PF13180 PDZ domain M1S15_07905 PF01103 Surface antigen M1S15_07905 PF07244 Surface antigen variable number repeat M1S15_07915 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M1S15_07915 PF00132 Bacterial transferase hexapeptide (six repeats) M1S15_07920 PF07977 FabA-like domain M1S15_07925 PF00132 Bacterial transferase hexapeptide (six repeats) M1S15_07925 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M1S15_07940 PF02631 RecX family M1S15_07945 PF00154 recA bacterial DNA recombination protein M1S15_07950 PF01479 S4 domain M1S15_07955 PF13419 Haloacid dehalogenase-like hydrolase M1S15_07980 PF01037 Lrp/AsnC ligand binding domain M1S15_07985 PF00266 Aminotransferase class-V M1S15_07990 PF00324 Amino acid permease M1S15_08005 PF05922 Peptidase inhibitor I9 M1S15_08005 PF00082 Subtilase family M1S15_08010 PF00916 Sulfate permease family M1S15_08010 PF01740 STAS domain M1S15_08015 PF02586 SOS response associated peptidase (SRAP) M1S15_08020 PF07995 Glucose / Sorbosone dehydrogenase M1S15_08030 PF00563 EAL domain M1S15_08030 PF03707 Bacterial signalling protein N terminal repeat M1S15_08030 PF00990 Diguanylate cyclase, GGDEF domain M1S15_08050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M1S15_08050 PF02378 Phosphotransferase system, EIIC M1S15_08055 PF00294 pfkB family carbohydrate kinase M1S15_08060 PF05524 PEP-utilising enzyme, N-terminal M1S15_08060 PF00391 PEP-utilising enzyme, mobile domain M1S15_08060 PF02896 PEP-utilising enzyme, TIM barrel domain M1S15_08060 PF00381 PTS HPr component phosphorylation site M1S15_08060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M1S15_08085 PF05525 Branched-chain amino acid transport protein M1S15_08090 PF00557 Metallopeptidase family M24 M1S15_08095 PF03466 LysR substrate binding domain M1S15_08095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_08105 PF00462 Glutaredoxin M1S15_08110 PF00202 Aminotransferase class-III M1S15_08115 PF00571 CBS domain M1S15_08115 PF00478 IMP dehydrogenase / GMP reductase domain M1S15_08140 PF00448 SRP54-type protein, GTPase domain M1S15_08140 PF02881 SRP54-type protein, helical bundle domain M1S15_08150 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M1S15_08165 PF08173 Membrane bound YbgT-like protein M1S15_08170 PF02322 Cytochrome bd terminal oxidase subunit II M1S15_08175 PF01654 Cytochrome bd terminal oxidase subunit I M1S15_08185 PF07290 Protein of unknown function (DUF1449) M1S15_08195 PF00294 pfkB family carbohydrate kinase M1S15_08200 PF00593 TonB dependent receptor M1S15_08200 PF07715 TonB-dependent Receptor Plug Domain M1S15_08205 PF05193 Peptidase M16 inactive domain M1S15_08205 PF00675 Insulinase (Peptidase family M16) M1S15_08205 PF08367 Peptidase M16C associated M1S15_08210 PF02253 Phospholipase A1 M1S15_08215 PF02386 Cation transport protein M1S15_08220 PF02080 TrkA-C domain M1S15_08220 PF02254 TrkA-N domain M1S15_08225 PF00291 Pyridoxal-phosphate dependent enzyme M1S15_08225 PF00585 C-terminal regulatory domain of Threonine dehydratase M1S15_08230 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M1S15_08245 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S15_08245 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S15_08255 PF02617 ATP-dependent Clp protease adaptor protein ClpS M1S15_08260 PF00004 ATPase family associated with various cellular activities (AAA) M1S15_08260 PF02861 Clp amino terminal domain, pathogenicity island component M1S15_08260 PF10431 C-terminal, D2-small domain, of ClpB protein M1S15_08260 PF17871 AAA lid domain M1S15_08260 PF07724 AAA domain (Cdc48 subfamily) M1S15_08265 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M1S15_08270 PF00793 DAHP synthetase I family M1S15_08285 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S15_08285 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_08315 PF00117 Glutamine amidotransferase class-I M1S15_08315 PF06418 CTP synthase N-terminus M1S15_08320 PF00793 DAHP synthetase I family M1S15_08325 PF00113 Enolase, C-terminal TIM barrel domain M1S15_08325 PF03952 Enolase, N-terminal domain M1S15_08330 PF04239 Protein of unknown function (DUF421) M1S15_08335 PF04977 Septum formation initiator M1S15_08340 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M1S15_08345 PF01144 Coenzyme A transferase M1S15_08350 PF01144 Coenzyme A transferase M1S15_08355 PF02803 Thiolase, C-terminal domain M1S15_08355 PF00108 Thiolase, N-terminal domain M1S15_08360 PF00206 Lyase M1S15_08360 PF10397 Adenylosuccinate lyase C-terminus M1S15_08365 PF00561 alpha/beta hydrolase fold M1S15_08370 PF07690 Major Facilitator Superfamily M1S15_08375 PF02627 Carboxymuconolactone decarboxylase family M1S15_08380 PF00775 Dioxygenase M1S15_08380 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M1S15_08385 PF00775 Dioxygenase M1S15_08390 PF01487 Type I 3-dehydroquinase M1S15_08395 PF05048 Periplasmic copper-binding protein (NosD) M1S15_08400 PF04966 Carbohydrate-selective porin, OprB family M1S15_08405 PF13360 PQQ-like domain M1S15_08405 PF01011 PQQ enzyme repeat M1S15_08415 PF04143 Sulphur transport M1S15_08425 PF00753 Metallo-beta-lactamase superfamily M1S15_08430 PF09339 IclR helix-turn-helix domain M1S15_08430 PF01614 Bacterial transcriptional regulator M1S15_08435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_08435 PF03466 LysR substrate binding domain M1S15_08440 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_08440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_08440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_08455 PF00106 short chain dehydrogenase M1S15_08465 PF07690 Major Facilitator Superfamily M1S15_08475 PF01425 Amidase M1S15_08480 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S15_08495 PF00355 Rieske [2Fe-2S] domain M1S15_08495 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S15_08510 PF00175 Oxidoreductase NAD-binding domain M1S15_08510 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S15_08515 PF01613 Flavin reductase like domain M1S15_08520 PF12833 Helix-turn-helix domain M1S15_08520 PF02311 AraC-like ligand binding domain M1S15_08525 PF01179 Copper amine oxidase, enzyme domain M1S15_08525 PF07833 Copper amine oxidase N-terminal domain M1S15_08525 PF02727 Copper amine oxidase, N2 domain M1S15_08525 PF02728 Copper amine oxidase, N3 domain M1S15_08535 PF00171 Aldehyde dehydrogenase family M1S15_08540 PF01804 Penicillin amidase M1S15_08545 PF12146 Serine aminopeptidase, S33 M1S15_08550 PF02803 Thiolase, C-terminal domain M1S15_08550 PF00108 Thiolase, N-terminal domain M1S15_08555 PF01144 Coenzyme A transferase M1S15_08560 PF01144 Coenzyme A transferase M1S15_08565 PF04444 Catechol dioxygenase N terminus M1S15_08565 PF00775 Dioxygenase M1S15_08570 PF02426 Muconolactone delta-isomerase M1S15_08575 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S15_08575 PF13378 Enolase C-terminal domain-like M1S15_08590 PF07729 FCD domain M1S15_08590 PF00392 Bacterial regulatory proteins, gntR family M1S15_08595 PF00920 Dehydratase family M1S15_08600 PF07690 Major Facilitator Superfamily M1S15_08610 PF00171 Aldehyde dehydrogenase family M1S15_08640 PF02954 Bacterial regulatory protein, Fis family M1S15_08640 PF00158 Sigma-54 interaction domain M1S15_08640 PF06506 Propionate catabolism activator M1S15_08645 PF00501 AMP-binding enzyme M1S15_08645 PF13193 AMP-binding enzyme C-terminal domain M1S15_08650 PF04341 Protein of unknown function, DUF485 M1S15_08655 PF00474 Sodium:solute symporter family M1S15_08660 PF08240 Alcohol dehydrogenase GroES-like domain M1S15_08660 PF00107 Zinc-binding dehydrogenase M1S15_08665 PF00171 Aldehyde dehydrogenase family M1S15_08675 PF00561 alpha/beta hydrolase fold M1S15_08680 PF00199 Catalase M1S15_08680 PF06628 Catalase-related immune-responsive M1S15_08695 PF07859 alpha/beta hydrolase fold M1S15_08700 PF01047 MarR family M1S15_08705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S15_08705 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_08710 PF00106 short chain dehydrogenase M1S15_08715 PF01872 RibD C-terminal domain M1S15_08720 PF00376 MerR family regulatory protein M1S15_08720 PF09278 MerR, DNA binding M1S15_08730 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_08740 PF12706 Beta-lactamase superfamily domain M1S15_08745 PF08359 YsiA-like protein, C-terminal region M1S15_08745 PF00440 Bacterial regulatory proteins, tetR family M1S15_08755 PF00857 Isochorismatase family M1S15_08760 PF03466 LysR substrate binding domain M1S15_08760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_08765 PF07995 Glucose / Sorbosone dehydrogenase M1S15_08770 PF02254 TrkA-N domain M1S15_08770 PF00999 Sodium/hydrogen exchanger family M1S15_08780 PF01546 Peptidase family M20/M25/M40 M1S15_08780 PF07687 Peptidase dimerisation domain M1S15_08790 PF17287 POTRA domain M1S15_08790 PF08479 POTRA domain, ShlB-type M1S15_08790 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M1S15_08795 PF05860 haemagglutination activity domain M1S15_08795 PF13018 Extended Signal Peptide of Type V secretion system M1S15_08795 PF13332 Hemagglutinin repeat M1S15_08795 PF04829 Pre-toxin domain with VENN motif M1S15_08810 PF07690 Major Facilitator Superfamily M1S15_08815 PF04909 Amidohydrolase M1S15_08825 PF00392 Bacterial regulatory proteins, gntR family M1S15_08825 PF07702 UTRA domain M1S15_08830 PF08450 SMP-30/Gluconolactonase/LRE-like region M1S15_08840 PF03466 LysR substrate binding domain M1S15_08840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_08865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S15_08865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S15_08865 PF01842 ACT domain M1S15_08870 PF03737 Aldolase/RraA M1S15_08990 PF01555 DNA methylase M1S15_09250 PF00529 HlyD membrane-fusion protein of T1SS M1S15_09250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S15_09265 PF00171 Aldehyde dehydrogenase family M1S15_09270 PF00920 Dehydratase family M1S15_09280 PF03466 LysR substrate binding domain M1S15_09280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_09285 PF01370 NAD dependent epimerase/dehydratase family M1S15_09290 PF07690 Major Facilitator Superfamily M1S15_09295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S15_09295 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S15_09300 PF12833 Helix-turn-helix domain M1S15_09300 PF06719 AraC-type transcriptional regulator N-terminus M1S15_09315 PF08240 Alcohol dehydrogenase GroES-like domain M1S15_09315 PF00107 Zinc-binding dehydrogenase M1S15_09325 PF01032 FecCD transport family M1S15_09330 PF00005 ABC transporter M1S15_09350 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S15_09350 PF14572 Phosphoribosyl synthetase-associated domain M1S15_09355 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S15_09430 PF00196 Bacterial regulatory proteins, luxR family M1S15_09435 PF01425 Amidase M1S15_09440 PF13533 Biotin-lipoyl like M1S15_09445 PF07690 Major Facilitator Superfamily M1S15_09470 PF01975 Survival protein SurE M1S15_09480 PF02824 TGS domain M1S15_09480 PF13291 ACT domain M1S15_09480 PF04607 Region found in RelA / SpoT proteins M1S15_09530 PF12146 Serine aminopeptidase, S33 M1S15_09535 PF12833 Helix-turn-helix domain M1S15_09535 PF02311 AraC-like ligand binding domain M1S15_09545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_09545 PF00672 HAMP domain M1S15_09545 PF00512 His Kinase A (phospho-acceptor) domain M1S15_09545 PF16527 Two-component sensor protein CpxA, periplasmic domain M1S15_09550 PF00072 Response regulator receiver domain M1S15_09550 PF00486 Transcriptional regulatory protein, C terminal M1S15_09555 PF00529 HlyD membrane-fusion protein of T1SS M1S15_09555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S15_09560 PF00873 AcrB/AcrD/AcrF family M1S15_09565 PF02321 Outer membrane efflux protein M1S15_09570 PF12146 Serine aminopeptidase, S33 M1S15_09575 PF00743 Flavin-binding monooxygenase-like M1S15_09580 PF01593 Flavin containing amine oxidoreductase M1S15_09595 PF01266 FAD dependent oxidoreductase M1S15_09615 PF16970 Type-1 fimbrial protein, A M1S15_09625 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S15_09625 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S15_09630 PF00577 Outer membrane usher protein M1S15_09630 PF13954 PapC N-terminal domain M1S15_09630 PF13953 PapC C-terminal domain M1S15_09635 PF00419 Fimbrial protein M1S15_09645 PF08240 Alcohol dehydrogenase GroES-like domain M1S15_09645 PF00107 Zinc-binding dehydrogenase M1S15_09655 PF00199 Catalase M1S15_09670 PF13091 PLD-like domain M1S15_09685 PF01244 Membrane dipeptidase (Peptidase family M19) M1S15_09690 PF04055 Radical SAM superfamily M1S15_09690 PF13186 Iron-sulfur cluster-binding domain M1S15_09695 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M1S15_09700 PF03070 TENA/THI-4/PQQC family M1S15_09705 PF12706 Beta-lactamase superfamily domain M1S15_09710 PF08042 PqqA family M1S15_09715 PF02503 Polyphosphate kinase middle domain M1S15_09715 PF17941 Polyphosphate kinase C-terminal domain 1 M1S15_09715 PF13089 Polyphosphate kinase N-terminal domain M1S15_09715 PF13090 Polyphosphate kinase C-terminal domain 2 M1S15_09720 PF00149 Calcineurin-like phosphoesterase M1S15_09730 PF00550 Phosphopantetheine attachment site M1S15_09730 PF00857 Isochorismatase family M1S15_09735 PF00106 short chain dehydrogenase M1S15_09740 PF00005 ABC transporter M1S15_09740 PF03459 TOBE domain M1S15_09745 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_09755 PF03459 TOBE domain M1S15_09755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_09760 PF00355 Rieske [2Fe-2S] domain M1S15_09760 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S15_09765 PF00866 Ring hydroxylating beta subunit M1S15_09770 PF00175 Oxidoreductase NAD-binding domain M1S15_09770 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S15_09770 PF00970 Oxidoreductase FAD-binding domain M1S15_09775 PF14525 AraC-binding-like domain M1S15_09775 PF12833 Helix-turn-helix domain M1S15_09785 PF01613 Flavin reductase like domain M1S15_09800 PF01738 Dienelactone hydrolase family M1S15_09805 PF07690 Major Facilitator Superfamily M1S15_09810 PF06719 AraC-type transcriptional regulator N-terminus M1S15_09810 PF12833 Helix-turn-helix domain M1S15_09835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_09835 PF03466 LysR substrate binding domain M1S15_09840 PF01144 Coenzyme A transferase M1S15_09845 PF01144 Coenzyme A transferase M1S15_09850 PF02667 Short chain fatty acid transporter M1S15_09855 PF00108 Thiolase, N-terminal domain M1S15_09855 PF02803 Thiolase, C-terminal domain M1S15_09860 PF03466 LysR substrate binding domain M1S15_09860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_09865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_09865 PF03466 LysR substrate binding domain M1S15_09880 PF10415 Fumarase C C-terminus M1S15_09880 PF00206 Lyase M1S15_09885 PF07715 TonB-dependent Receptor Plug Domain M1S15_09885 PF00593 TonB dependent receptor M1S15_09890 PF00083 Sugar (and other) transporter M1S15_09905 PF00005 ABC transporter M1S15_09910 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_09915 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S15_09930 PF00392 Bacterial regulatory proteins, gntR family M1S15_09930 PF07702 UTRA domain M1S15_09940 PF02525 Flavodoxin-like fold M1S15_09945 PF01638 HxlR-like helix-turn-helix M1S15_09950 PF12833 Helix-turn-helix domain M1S15_09950 PF06445 GyrI-like small molecule binding domain M1S15_09965 PF01925 Sulfite exporter TauE/SafE M1S15_09980 PF04273 Putative phosphatase (DUF442) M1S15_09980 PF00753 Metallo-beta-lactamase superfamily M1S15_09985 PF02954 Bacterial regulatory protein, Fis family M1S15_09985 PF00072 Response regulator receiver domain M1S15_09985 PF00158 Sigma-54 interaction domain M1S15_09990 PF01062 Bestrophin, RFP-TM, chloride channel M1S15_09995 PF00107 Zinc-binding dehydrogenase M1S15_09995 PF08240 Alcohol dehydrogenase GroES-like domain M1S15_10000 PF00106 short chain dehydrogenase M1S15_10005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S15_10005 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_10010 PF02817 e3 binding domain M1S15_10010 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S15_10010 PF00364 Biotin-requiring enzyme M1S15_10015 PF02779 Transketolase, pyrimidine binding domain M1S15_10015 PF02780 Transketolase, C-terminal domain M1S15_10020 PF00676 Dehydrogenase E1 component M1S15_10025 PF04055 Radical SAM superfamily M1S15_10040 PF00990 Diguanylate cyclase, GGDEF domain M1S15_10040 PF08448 PAS fold M1S15_10045 PF01264 Chorismate synthase M1S15_10050 PF05175 Methyltransferase small domain M1S15_10055 PF00291 Pyridoxal-phosphate dependent enzyme M1S15_10065 PF17862 AAA+ lid domain M1S15_10065 PF00004 ATPase family associated with various cellular activities (AAA) M1S15_10065 PF01434 Peptidase family M41 M1S15_10075 PF05166 YcgL domain M1S15_10095 PF00570 HRDC domain M1S15_10095 PF01612 3'-5' exonuclease M1S15_10100 PF13662 Toprim domain M1S15_10100 PF02132 RecR protein M1S15_10105 PF02575 YbaB/EbfC DNA-binding family M1S15_10115 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S15_10120 PF00561 alpha/beta hydrolase fold M1S15_10125 PF08241 Methyltransferase domain M1S15_10155 PF01230 HIT domain M1S15_10190 PF00005 ABC transporter M1S15_10195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S15_10210 PF00593 TonB dependent receptor M1S15_10210 PF07715 TonB-dependent Receptor Plug Domain M1S15_10230 PF01925 Sulfite exporter TauE/SafE M1S15_10235 PF00793 DAHP synthetase I family M1S15_10240 PF02654 Cobalamin-5-phosphate synthase M1S15_10255 PF02277 Phosphoribosyltransferase M1S15_10260 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M1S15_10270 PF13419 Haloacid dehalogenase-like hydrolase M1S15_10295 PF07715 TonB-dependent Receptor Plug Domain M1S15_10295 PF00593 TonB dependent receptor M1S15_10310 PF06276 Ferric iron reductase FhuF-like transporter M1S15_10310 PF04183 IucA / IucC family M1S15_10315 PF06276 Ferric iron reductase FhuF-like transporter M1S15_10315 PF04183 IucA / IucC family M1S15_10320 PF07690 Major Facilitator Superfamily M1S15_10325 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S15_10330 PF04183 IucA / IucC family M1S15_10330 PF06276 Ferric iron reductase FhuF-like transporter M1S15_10335 PF04073 Aminoacyl-tRNA editing domain M1S15_10345 PF03109 ABC1 family M1S15_10350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_10350 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_10350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_10355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_10355 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_10355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_10360 PF00487 Fatty acid desaturase M1S15_10365 PF12852 Cupin M1S15_10365 PF12833 Helix-turn-helix domain M1S15_10370 PF09312 SurA N-terminal domain M1S15_10370 PF00639 PPIC-type PPIASE domain M1S15_10375 PF00216 Bacterial DNA-binding protein M1S15_10390 PF02082 Transcriptional regulator M1S15_10395 PF00266 Aminotransferase class-V M1S15_10400 PF01592 NifU-like N terminal domain M1S15_10405 PF01521 Iron-sulphur cluster biosynthesis M1S15_10410 PF00226 DnaJ domain M1S15_10410 PF07743 HSCB C-terminal oligomerisation domain M1S15_10415 PF00012 Hsp70 protein M1S15_10420 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S15_10425 PF00211 Adenylate and Guanylate cyclase catalytic domain M1S15_10435 PF02559 CarD-like/TRCF domain M1S15_10435 PF00270 DEAD/DEAH box helicase M1S15_10435 PF00271 Helicase conserved C-terminal domain M1S15_10435 PF03461 TRCF domain M1S15_10435 PF17757 UvrB interaction domain M1S15_10455 PF03737 Aldolase/RraA M1S15_10460 PF13460 NAD(P)H-binding M1S15_10465 PF01649 Ribosomal protein S20 M1S15_10475 PF00459 Inositol monophosphatase family M1S15_10490 PF00005 ABC transporter M1S15_10490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S15_10495 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_10500 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_10505 PF01432 Peptidase family M3 M1S15_10525 PF07715 TonB-dependent Receptor Plug Domain M1S15_10525 PF00593 TonB dependent receptor M1S15_10535 PF01618 MotA/TolQ/ExbB proton channel family M1S15_10540 PF02472 Biopolymer transport protein ExbD/TolR M1S15_10545 PF02472 Biopolymer transport protein ExbD/TolR M1S15_10555 PF01274 Malate synthase M1S15_10560 PF03969 AFG1-like ATPase M1S15_10570 PF00743 Flavin-binding monooxygenase-like M1S15_10580 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M1S15_10590 PF00216 Bacterial DNA-binding protein M1S15_10595 PF00575 S1 RNA binding domain M1S15_10600 PF02224 Cytidylate kinase M1S15_10610 PF14437 MafB19-like deaminase M1S15_10620 PF03167 Uracil DNA glycosylase superfamily M1S15_10630 PF03934 Type II secretion system (T2SS), protein K M1S15_10635 PF07963 Prokaryotic N-terminal methylation motif M1S15_10635 PF11612 Type II secretion system (T2SS), protein J M1S15_10640 PF07963 Prokaryotic N-terminal methylation motif M1S15_10640 PF02501 Type II secretion system (T2SS), protein I M1S15_10655 PF01026 TatD related DNase M1S15_10665 PF09115 DNA polymerase III, delta subunit, C terminal M1S15_10670 PF02348 Cytidylyltransferase M1S15_10675 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M1S15_10680 PF00664 ABC transporter transmembrane region M1S15_10680 PF00005 ABC transporter M1S15_10690 PF01618 MotA/TolQ/ExbB proton channel family M1S15_10695 PF17762 HTH domain found in ParB protein M1S15_10695 PF02195 ParB-like nuclease domain M1S15_10700 PF13614 AAA domain M1S15_10705 PF02527 rRNA small subunit methyltransferase G M1S15_10710 PF00483 Nucleotidyl transferase M1S15_10715 PF01636 Phosphotransferase enzyme family M1S15_10720 PF04453 LPS transport system D M1S15_10720 PF03968 OstA-like protein M1S15_10725 PF00639 PPIC-type PPIASE domain M1S15_10725 PF09312 SurA N-terminal domain M1S15_10730 PF01116 Fructose-bisphosphate aldolase class-II M1S15_10740 PF00162 Phosphoglycerate kinase M1S15_10750 PF02545 Maf-like protein M1S15_10755 PF08007 Cupin superfamily protein M1S15_10770 PF00375 Sodium:dicarboxylate symporter family M1S15_10775 PF06912 Protein of unknown function (DUF1275) M1S15_10780 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M1S15_10785 PF00664 ABC transporter transmembrane region M1S15_10785 PF00005 ABC transporter M1S15_10795 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S15_10795 PF12833 Helix-turn-helix domain M1S15_10800 PF01597 Glycine cleavage H-protein M1S15_10805 PF02146 Sir2 family M1S15_10810 PF00474 Sodium:solute symporter family M1S15_10815 PF01037 Lrp/AsnC ligand binding domain M1S15_10820 PF00171 Aldehyde dehydrogenase family M1S15_10820 PF01619 Proline dehydrogenase M1S15_10820 PF14850 DNA-binding domain of Proline dehydrogenase M1S15_10820 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M1S15_10825 PF04229 GrpB protein M1S15_10830 PF05958 tRNA (Uracil-5-)-methyltransferase M1S15_10840 PF09992 Phosphodiester glycosidase M1S15_10850 PF04264 YceI-like domain M1S15_10860 PF02779 Transketolase, pyrimidine binding domain M1S15_10860 PF02780 Transketolase, C-terminal domain M1S15_10860 PF00456 Transketolase, thiamine diphosphate binding domain M1S15_10865 PF02773 S-adenosylmethionine synthetase, C-terminal domain M1S15_10865 PF02772 S-adenosylmethionine synthetase, central domain M1S15_10865 PF00438 S-adenosylmethionine synthetase, N-terminal domain M1S15_10885 PF00905 Penicillin binding protein transpeptidase domain M1S15_10900 PF02075 Crossover junction endodeoxyribonuclease RuvC M1S15_10905 PF01256 Carbohydrate kinase M1S15_10905 PF03853 YjeF-related protein N-terminus M1S15_10910 PF08331 Domain of unknown function (DUF1730) M1S15_10915 PF06968 Biotin and Thiamin Synthesis associated domain M1S15_10915 PF04055 Radical SAM superfamily M1S15_10930 PF16970 Type-1 fimbrial protein, A M1S15_10935 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S15_10935 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S15_10940 PF13954 PapC N-terminal domain M1S15_10940 PF13953 PapC C-terminal domain M1S15_10940 PF00577 Outer membrane usher protein M1S15_10960 PF00892 EamA-like transporter family M1S15_10980 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S15_10990 PF03466 LysR substrate binding domain M1S15_10990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_11010 PF00440 Bacterial regulatory proteins, tetR family M1S15_11020 PF01709 Transcriptional regulator M1S15_11025 PF01037 Lrp/AsnC ligand binding domain M1S15_11035 PF00005 ABC transporter M1S15_11040 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_11045 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_11060 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S15_11060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_11070 PF00296 Luciferase-like monooxygenase M1S15_11075 PF03180 NLPA lipoprotein M1S15_11080 PF03180 NLPA lipoprotein M1S15_11085 PF09383 NIL domain M1S15_11085 PF00005 ABC transporter M1S15_11090 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_11095 PF01926 50S ribosome-binding GTPase M1S15_11095 PF06071 Protein of unknown function (DUF933) M1S15_11120 PF03591 AzlC protein M1S15_11125 PF05437 Branched-chain amino acid transport protein (AzlD) M1S15_11135 PF02222 ATP-grasp domain M1S15_11140 PF01909 Nucleotidyltransferase domain M1S15_11140 PF01966 HD domain M1S15_11140 PF08335 GlnD PII-uridylyltransferase M1S15_11145 PF00155 Aminotransferase class I and II M1S15_11155 PF12833 Helix-turn-helix domain M1S15_11155 PF12852 Cupin M1S15_11160 PF00255 Glutathione peroxidase M1S15_11165 PF01641 SelR domain M1S15_11170 PF00155 Aminotransferase class I and II M1S15_11175 PF00375 Sodium:dicarboxylate symporter family M1S15_11180 PF17763 Glutaminase/Asparaginase C-terminal domain M1S15_11180 PF00710 Asparaginase, N-terminal M1S15_11185 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S15_11185 PF14579 Helix-hairpin-helix motif M1S15_11185 PF02811 PHP domain M1S15_11185 PF01336 OB-fold nucleic acid binding domain M1S15_11185 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S15_11190 PF00588 SpoU rRNA Methylase family M1S15_11195 PF00132 Bacterial transferase hexapeptide (six repeats) M1S15_11210 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_11210 PF13192 Thioredoxin domain M1S15_11225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_11225 PF03466 LysR substrate binding domain M1S15_11230 PF01758 Sodium Bile acid symporter family M1S15_11235 PF01022 Bacterial regulatory protein, arsR family M1S15_11240 PF03960 ArsC family M1S15_11250 PF13382 Adenine deaminase C-terminal domain M1S15_11250 PF01979 Amidohydrolase family M1S15_11260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_11260 PF03466 LysR substrate binding domain M1S15_11270 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S15_11275 PF01177 Asp/Glu/Hydantoin racemase M1S15_11280 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M1S15_11285 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_11290 PF00005 ABC transporter M1S15_11295 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S15_11305 PF00083 Sugar (and other) transporter M1S15_11310 PF00296 Luciferase-like monooxygenase M1S15_11315 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S15_11315 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_11315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_11325 PF01654 Cytochrome bd terminal oxidase subunit I M1S15_11330 PF02322 Cytochrome bd terminal oxidase subunit II M1S15_11340 PF00392 Bacterial regulatory proteins, gntR family M1S15_11340 PF00155 Aminotransferase class I and II M1S15_11345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_11345 PF03466 LysR substrate binding domain M1S15_11360 PF00698 Acyl transferase domain M1S15_11365 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M1S15_11375 PF01039 Carboxyl transferase domain M1S15_11380 PF06857 Malonate decarboxylase delta subunit (MdcD) M1S15_11385 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M1S15_11390 PF16957 Malonate decarboxylase, alpha subunit, transporter M1S15_11415 PF04172 LrgB-like family M1S15_11420 PF03788 LrgA family M1S15_11425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_11425 PF03466 LysR substrate binding domain M1S15_11430 PF14834 Glutathione S-transferase, C-terminal domain M1S15_11430 PF02798 Glutathione S-transferase, N-terminal domain M1S15_11435 PF02798 Glutathione S-transferase, N-terminal domain M1S15_11440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_11440 PF03466 LysR substrate binding domain M1S15_11450 PF00581 Rhodanese-like domain M1S15_11455 PF00132 Bacterial transferase hexapeptide (six repeats) M1S15_11465 PF00266 Aminotransferase class-V M1S15_11475 PF01810 LysE type translocator M1S15_11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_11480 PF03466 LysR substrate binding domain M1S15_11490 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S15_11495 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S15_11500 PF00005 ABC transporter M1S15_11505 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_11510 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_11525 PF00072 Response regulator receiver domain M1S15_11540 PF13404 AsnC-type helix-turn-helix domain M1S15_11540 PF01037 Lrp/AsnC ligand binding domain M1S15_11550 PF00717 Peptidase S24-like M1S15_11575 PF18011 C-terminal domain found in long catalases M1S15_11575 PF00199 Catalase M1S15_11575 PF06628 Catalase-related immune-responsive M1S15_11585 PF18146 Damage-inducible protein CinA KH domain M1S15_11585 PF00994 Probable molybdopterin binding domain M1S15_11585 PF02464 Competence-damaged protein M1S15_11620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_11620 PF03466 LysR substrate binding domain M1S15_11650 PF00501 AMP-binding enzyme M1S15_11650 PF13193 AMP-binding enzyme C-terminal domain M1S15_11655 PF00440 Bacterial regulatory proteins, tetR family M1S15_11660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_11660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_11660 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_11665 PF01039 Carboxyl transferase domain M1S15_11670 PF00378 Enoyl-CoA hydratase/isomerase M1S15_11675 PF02785 Biotin carboxylase C-terminal domain M1S15_11675 PF00289 Biotin carboxylase, N-terminal domain M1S15_11675 PF00364 Biotin-requiring enzyme M1S15_11675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S15_11675 PF18140 Propionyl-coenzyme A carboxylase BT domain M1S15_11680 PF00682 HMGL-like M1S15_11685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_11685 PF03466 LysR substrate binding domain M1S15_11700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_11700 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_11700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_11700 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S15_11710 PF07690 Major Facilitator Superfamily M1S15_11720 PF01144 Coenzyme A transferase M1S15_11725 PF01144 Coenzyme A transferase M1S15_11730 PF07690 Major Facilitator Superfamily M1S15_11735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_11735 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_11735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_11740 PF00378 Enoyl-CoA hydratase/isomerase M1S15_11750 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S15_11750 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S15_11750 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S15_11755 PF02803 Thiolase, C-terminal domain M1S15_11755 PF00108 Thiolase, N-terminal domain M1S15_11760 PF09339 IclR helix-turn-helix domain M1S15_11765 PF07690 Major Facilitator Superfamily M1S15_11770 PF03060 Nitronate monooxygenase M1S15_11775 PF00378 Enoyl-CoA hydratase/isomerase M1S15_11780 PF09339 IclR helix-turn-helix domain M1S15_11785 PF02515 CoA-transferase family III M1S15_11790 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_11790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_11790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_11795 PF07690 Major Facilitator Superfamily M1S15_11800 PF13419 Haloacid dehalogenase-like hydrolase M1S15_11805 PF00266 Aminotransferase class-V M1S15_11810 PF01266 FAD dependent oxidoreductase M1S15_11815 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_11820 PF08402 TOBE domain M1S15_11820 PF00005 ABC transporter M1S15_11830 PF00392 Bacterial regulatory proteins, gntR family M1S15_11830 PF07702 UTRA domain M1S15_11835 PF01494 FAD binding domain M1S15_11840 PF01614 Bacterial transcriptional regulator M1S15_11840 PF09339 IclR helix-turn-helix domain M1S15_11845 PF02525 Flavodoxin-like fold M1S15_11850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_11850 PF03466 LysR substrate binding domain M1S15_11855 PF02627 Carboxymuconolactone decarboxylase family M1S15_11860 PF00171 Aldehyde dehydrogenase family M1S15_11870 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S15_11880 PF00171 Aldehyde dehydrogenase family M1S15_11885 PF00296 Luciferase-like monooxygenase M1S15_11890 PF01613 Flavin reductase like domain M1S15_11895 PF12697 Alpha/beta hydrolase family M1S15_11915 PF01292 Prokaryotic cytochrome b561 M1S15_11920 PF00199 Catalase M1S15_11955 PF03061 Thioesterase superfamily M1S15_11960 PF00132 Bacterial transferase hexapeptide (six repeats) M1S15_11965 PF07848 PaaX-like protein M1S15_11965 PF08223 PaaX-like protein C-terminal domain M1S15_11970 PF14535 AMP-binding enzyme C-terminal domain M1S15_11970 PF00501 AMP-binding enzyme M1S15_11975 PF02803 Thiolase, C-terminal domain M1S15_11975 PF00108 Thiolase, N-terminal domain M1S15_11980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S15_11980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S15_11980 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S15_11985 PF00378 Enoyl-CoA hydratase/isomerase M1S15_11990 PF00378 Enoyl-CoA hydratase/isomerase M1S15_11995 PF00970 Oxidoreductase FAD-binding domain M1S15_11995 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S15_11995 PF00175 Oxidoreductase NAD-binding domain M1S15_12000 PF01883 Iron-sulfur cluster assembly protein M1S15_12005 PF05138 Phenylacetic acid catabolic protein M1S15_12010 PF06243 Phenylacetic acid degradation B M1S15_12015 PF05138 Phenylacetic acid catabolic protein M1S15_12020 PF00171 Aldehyde dehydrogenase family M1S15_12020 PF01575 MaoC like domain M1S15_12025 PF03313 Serine dehydratase alpha chain M1S15_12025 PF03315 Serine dehydratase beta chain M1S15_12030 PF13520 Amino acid permease M1S15_12035 PF00171 Aldehyde dehydrogenase family M1S15_12040 PF00083 Sugar (and other) transporter M1S15_12050 PF04324 BFD-like [2Fe-2S] binding domain M1S15_12050 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_12060 PF01266 FAD dependent oxidoreductase M1S15_12070 PF00392 Bacterial regulatory proteins, gntR family M1S15_12080 PF00701 Dihydrodipicolinate synthetase family M1S15_12090 PF00376 MerR family regulatory protein M1S15_12090 PF09278 MerR, DNA binding M1S15_12105 PF02677 Epoxyqueuosine reductase QueH M1S15_12120 PF07690 Major Facilitator Superfamily M1S15_12125 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S15_12135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_12135 PF03466 LysR substrate binding domain M1S15_12155 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M1S15_12160 PF06812 ImpA, N-terminal, type VI secretion system M1S15_12165 PF10431 C-terminal, D2-small domain, of ClpB protein M1S15_12165 PF17871 AAA lid domain M1S15_12165 PF07724 AAA domain (Cdc48 subfamily) M1S15_12165 PF00004 ATPase family associated with various cellular activities (AAA) M1S15_12180 PF01389 OmpA-like transmembrane domain M1S15_12180 PF00691 OmpA family M1S15_12190 PF14331 ImcF-related N-terminal domain M1S15_12190 PF06744 Type VI secretion protein IcmF C-terminal M1S15_12190 PF06761 Intracellular multiplication and human macrophage-killing M1S15_12205 PF05947 Type VI secretion system, TssF M1S15_12220 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M1S15_12245 PF00005 ABC transporter M1S15_12250 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S15_12255 PF01425 Amidase M1S15_12260 PF08753 NikR C terminal nickel binding domain M1S15_12260 PF01402 Ribbon-helix-helix protein, copG family M1S15_12280 PF02525 Flavodoxin-like fold M1S15_12285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S15_12285 PF00289 Biotin carboxylase, N-terminal domain M1S15_12285 PF02785 Biotin carboxylase C-terminal domain M1S15_12300 PF13823 Alcohol dehydrogenase GroES-associated M1S15_12300 PF00107 Zinc-binding dehydrogenase M1S15_12300 PF08240 Alcohol dehydrogenase GroES-like domain M1S15_12310 PF00440 Bacterial regulatory proteins, tetR family M1S15_12330 PF00654 Voltage gated chloride channel M1S15_12335 PF00289 Biotin carboxylase, N-terminal domain M1S15_12335 PF02785 Biotin carboxylase C-terminal domain M1S15_12335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S15_12335 PF00364 Biotin-requiring enzyme M1S15_12345 PF07286 Protein of unknown function (DUF1445) M1S15_12350 PF03746 LamB/YcsF family M1S15_12355 PF01566 Natural resistance-associated macrophage protein M1S15_12360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_12360 PF03466 LysR substrate binding domain M1S15_12375 PF03527 RHS protein M1S15_12375 PF05593 RHS Repeat M1S15_12380 PF13296 Putative type VI secretion system Rhs element Vgr M1S15_12380 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S15_12380 PF04717 Type VI secretion system, phage-baseplate injector M1S15_12390 PF13419 Haloacid dehalogenase-like hydrolase M1S15_12410 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S15_12410 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S15_12430 PF07690 Major Facilitator Superfamily M1S15_12445 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S15_12450 PF00563 EAL domain M1S15_12450 PF03707 Bacterial signalling protein N terminal repeat M1S15_12450 PF00990 Diguanylate cyclase, GGDEF domain M1S15_12455 PF00892 EamA-like transporter family M1S15_12460 PF01037 Lrp/AsnC ligand binding domain M1S15_12465 PF00488 MutS domain V M1S15_12465 PF01624 MutS domain I M1S15_12465 PF05188 MutS domain II M1S15_12465 PF05190 MutS family domain IV M1S15_12465 PF05192 MutS domain III M1S15_12475 PF11953 Domain of unknown function (DUF3470) M1S15_12475 PF00037 4Fe-4S binding domain M1S15_12485 PF01596 O-methyltransferase M1S15_12495 PF00132 Bacterial transferase hexapeptide (six repeats) M1S15_12500 PF01205 Uncharacterized protein family UPF0029 M1S15_12510 PF03412 Peptidase C39 family M1S15_12510 PF00664 ABC transporter transmembrane region M1S15_12510 PF00005 ABC transporter M1S15_12515 PF02321 Outer membrane efflux protein M1S15_12520 PF00005 ABC transporter M1S15_12520 PF12399 Branched-chain amino acid ATP-binding cassette transporter M1S15_12525 PF03968 OstA-like protein M1S15_12540 PF01380 SIS domain M1S15_12540 PF00571 CBS domain M1S15_12545 PF09190 DALR domain M1S15_12545 PF01406 tRNA synthetases class I (C) catalytic domain M1S15_12570 PF01638 HxlR-like helix-turn-helix M1S15_12575 PF07690 Major Facilitator Superfamily M1S15_12600 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S15_12600 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S15_12610 PF00313 'Cold-shock' DNA-binding domain M1S15_12615 PF01810 LysE type translocator M1S15_12645 PF02601 Exonuclease VII, large subunit M1S15_12645 PF13742 OB-fold nucleic acid binding domain M1S15_12680 PF00376 MerR family regulatory protein M1S15_12680 PF09278 MerR, DNA binding M1S15_12685 PF00403 Heavy-metal-associated domain M1S15_12690 PF00403 Heavy-metal-associated domain M1S15_12695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_12695 PF03466 LysR substrate binding domain M1S15_12705 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S15_12705 PF00355 Rieske [2Fe-2S] domain M1S15_12710 PF00866 Ring hydroxylating beta subunit M1S15_12715 PF00175 Oxidoreductase NAD-binding domain M1S15_12715 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S15_12715 PF00970 Oxidoreductase FAD-binding domain M1S15_12720 PF00106 short chain dehydrogenase M1S15_12725 PF03594 Benzoate membrane transport protein M1S15_12730 PF07690 Major Facilitator Superfamily M1S15_12740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M1S15_12740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M1S15_12745 PF04408 Helicase associated domain (HA2) M1S15_12745 PF00271 Helicase conserved C-terminal domain M1S15_12745 PF11898 Domain of unknown function (DUF3418) M1S15_12745 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M1S15_12745 PF00270 DEAD/DEAH box helicase M1S15_12750 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S15_12750 PF00578 AhpC/TSA family M1S15_12770 PF13192 Thioredoxin domain M1S15_12770 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_12780 PF00043 Glutathione S-transferase, C-terminal domain M1S15_12780 PF02798 Glutathione S-transferase, N-terminal domain M1S15_12790 PF02390 Putative methyltransferase M1S15_12795 PF00043 Glutathione S-transferase, C-terminal domain M1S15_12795 PF13417 Glutathione S-transferase, N-terminal domain M1S15_12805 PF13488 Glycine zipper M1S15_12805 PF00691 OmpA family M1S15_12810 PF01979 Amidohydrolase family M1S15_12815 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S15_12815 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S15_12825 PF02926 THUMP domain M1S15_12825 PF01170 Putative RNA methylase family UPF0020 M1S15_12825 PF10672 S-adenosylmethionine-dependent methyltransferase M1S15_12840 PF00004 ATPase family associated with various cellular activities (AAA) M1S15_12840 PF07724 AAA domain (Cdc48 subfamily) M1S15_12840 PF17871 AAA lid domain M1S15_12840 PF02861 Clp amino terminal domain, pathogenicity island component M1S15_12840 PF10431 C-terminal, D2-small domain, of ClpB protein M1S15_12855 PF02566 OsmC-like protein M1S15_12865 PF00027 Cyclic nucleotide-binding domain M1S15_12865 PF13545 Crp-like helix-turn-helix domain M1S15_12890 PF00709 Adenylosuccinate synthetase M1S15_12895 PF13393 Histidyl-tRNA synthetase M1S15_12900 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S15_12900 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S15_12905 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S15_12905 PF01411 tRNA synthetases class II (A) M1S15_12905 PF02272 DHHA1 domain M1S15_12910 PF00696 Amino acid kinase family M1S15_12910 PF01842 ACT domain M1S15_12910 PF13840 ACT domain M1S15_12915 PF02599 Global regulator protein family M1S15_12920 PF01351 Ribonuclease HII M1S15_12930 PF01292 Prokaryotic cytochrome b561 M1S15_12935 PF00962 Adenosine/AMP deaminase M1S15_12940 PF00860 Permease family M1S15_12950 PF00743 Flavin-binding monooxygenase-like M1S15_12955 PF00106 short chain dehydrogenase M1S15_12965 PF17954 Quercetinase C-terminal cupin domain M1S15_12965 PF02678 Pirin M1S15_12970 PF17932 Tetracyclin repressor-like, C-terminal domain M1S15_12970 PF00440 Bacterial regulatory proteins, tetR family M1S15_12980 PF13610 DDE domain M1S15_13000 PF00809 Pterin binding enzyme M1S15_13005 PF00893 Small Multidrug Resistance protein M1S15_13025 PF00583 Acetyltransferase (GNAT) family M1S15_13030 PF00589 Phage integrase family M1S15_13030 PF13495 Phage integrase, N-terminal SAM-like domain M1S15_13040 PF11809 Domain of unknown function (DUF3330) M1S15_13040 PF00563 EAL domain M1S15_13045 PF00239 Resolvase, N terminal domain M1S15_13045 PF02796 Helix-turn-helix domain of resolvase M1S15_13055 PF13610 DDE domain M1S15_13065 PF00106 short chain dehydrogenase M1S15_13075 PF13610 DDE domain M1S15_13080 PF01636 Phosphotransferase enzyme family M1S15_13095 PF13610 DDE domain M1S15_13100 PF02796 Helix-turn-helix domain of resolvase M1S15_13100 PF00239 Resolvase, N terminal domain M1S15_13120 PF02796 Helix-turn-helix domain of resolvase M1S15_13120 PF00239 Resolvase, N terminal domain M1S15_13125 PF13610 DDE domain M1S15_13135 PF04958 Arginine N-succinyltransferase beta subunit M1S15_13140 PF00202 Aminotransferase class-III M1S15_13150 PF00171 Aldehyde dehydrogenase family M1S15_13160 PF07729 FCD domain M1S15_13160 PF00392 Bacterial regulatory proteins, gntR family M1S15_13170 PF00324 Amino acid permease M1S15_13175 PF01266 FAD dependent oxidoreductase M1S15_13180 PF00324 Amino acid permease M1S15_13220 PF03527 RHS protein M1S15_13220 PF05593 RHS Repeat M1S15_13225 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S15_13225 PF04717 Type VI secretion system, phage-baseplate injector M1S15_13225 PF13296 Putative type VI secretion system Rhs element Vgr M1S15_13245 PF03180 NLPA lipoprotein M1S15_13250 PF05987 Bacterial protein of unknown function (DUF898) M1S15_13265 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S15_13265 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_13270 PF00764 Arginosuccinate synthase M1S15_13275 PF01590 GAF domain M1S15_13275 PF00990 Diguanylate cyclase, GGDEF domain M1S15_13275 PF00563 EAL domain M1S15_13275 PF00360 Phytochrome region M1S15_13280 PF01979 Amidohydrolase family M1S15_13285 PF00929 Exonuclease M1S15_13295 PF00593 TonB dependent receptor M1S15_13295 PF07715 TonB-dependent Receptor Plug Domain M1S15_13300 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_13300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S15_13305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S15_13305 PF00005 ABC transporter M1S15_13310 PF12911 N-terminal TM domain of oligopeptide transport permease C M1S15_13310 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_13315 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_13320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1S15_13325 PF01476 LysM domain M1S15_13325 PF01464 Transglycosylase SLT domain M1S15_13325 PF01476 LysM domain M1S15_13325 PF01464 Transglycosylase SLT domain M1S15_13330 PF00929 Exonuclease M1S15_13340 PF09297 NADH pyrophosphatase zinc ribbon domain M1S15_13340 PF00293 NUDIX domain M1S15_13350 PF04972 BON domain M1S15_13355 PF02021 Uncharacterised protein family UPF0102 M1S15_13360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S15_13370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_13370 PF03466 LysR substrate binding domain M1S15_13375 PF01810 LysE type translocator M1S15_13395 PF01494 FAD binding domain M1S15_13400 PF01494 FAD binding domain M1S15_13405 PF05195 Aminopeptidase P, N-terminal domain M1S15_13405 PF00557 Metallopeptidase family M24 M1S15_13490 PF01476 LysM domain M1S15_13490 PF08525 Opacity-associated protein A N-terminal motif M1S15_13490 PF01551 Peptidase family M23 M1S15_13815 PF01812 5-formyltetrahydrofolate cyclo-ligase family M1S15_13820 PF00691 OmpA family M1S15_13820 PF04355 SmpA / OmlA family M1S15_13825 PF03895 YadA-like membrane anchor domain M1S15_13825 PF13018 Extended Signal Peptide of Type V secretion system M1S15_13825 PF05658 Head domain of trimeric autotransporter adhesin M1S15_13825 PF05662 Coiled stalk of trimeric autotransporter adhesin M1S15_13830 PF00004 ATPase family associated with various cellular activities (AAA) M1S15_13830 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S15_13830 PF02190 ATP-dependent protease La (LON) substrate-binding domain M1S15_13835 PF02590 Predicted SPOUT methyltransferase M1S15_13840 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M1S15_13850 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S15_13850 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S15_13855 PF04060 Putative Fe-S cluster M1S15_13860 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S15_13860 PF00633 Helix-hairpin-helix motif M1S15_13860 PF10576 Iron-sulfur binding domain of endonuclease III M1S15_13870 PF05191 Adenylate kinase, active site lid M1S15_13885 PF03717 Penicillin-binding Protein dimerisation domain M1S15_13885 PF00905 Penicillin binding protein transpeptidase domain M1S15_13900 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S15_13905 PF01730 UreF M1S15_13910 PF05194 UreE urease accessory protein, C-terminal domain M1S15_13910 PF02814 UreE urease accessory protein, N-terminal domain M1S15_13915 PF00449 Urease alpha-subunit, N-terminal domain M1S15_13915 PF01979 Amidohydrolase family M1S15_13920 PF00699 Urease beta subunit M1S15_13925 PF00547 Urease, gamma subunit M1S15_13930 PF01774 UreD urease accessory protein M1S15_13945 PF00463 Isocitrate lyase family M1S15_13950 PF03466 LysR substrate binding domain M1S15_13950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_13955 PF01595 Cyclin M transmembrane N-terminal domain M1S15_13955 PF03471 Transporter associated domain M1S15_13955 PF00571 CBS domain M1S15_13960 PF03600 Citrate transporter M1S15_13975 PF00009 Elongation factor Tu GTP binding domain M1S15_13980 PF01507 Phosphoadenosine phosphosulfate reductase family M1S15_13990 PF14052 Capsule assembly protein Wzi M1S15_13995 PF00152 tRNA synthetases class II (D, K and N) M1S15_13995 PF01336 OB-fold nucleic acid binding domain M1S15_14010 PF00301 Rubredoxin M1S15_14015 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_14015 PF18113 Rubredoxin binding C-terminal domain M1S15_14020 PF00561 alpha/beta hydrolase fold M1S15_14025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_14025 PF03466 LysR substrate binding domain M1S15_14035 PF13089 Polyphosphate kinase N-terminal domain M1S15_14035 PF17941 Polyphosphate kinase C-terminal domain 1 M1S15_14035 PF13090 Polyphosphate kinase C-terminal domain 2 M1S15_14035 PF02503 Polyphosphate kinase middle domain M1S15_14040 PF00912 Transglycosylase M1S15_14045 PF01694 Rhomboid family M1S15_14055 PF00005 ABC transporter M1S15_14060 PF13472 GDSL-like Lipase/Acylhydrolase family M1S15_14065 PF00484 Carbonic anhydrase M1S15_14070 PF00561 alpha/beta hydrolase fold M1S15_14080 PF07715 TonB-dependent Receptor Plug Domain M1S15_14080 PF00593 TonB dependent receptor M1S15_14085 PF01521 Iron-sulphur cluster biosynthesis M1S15_14085 PF01106 NifU-like domain M1S15_14095 PF00884 Sulfatase M1S15_14100 PF03781 Sulfatase-modifying factor enzyme 1 M1S15_14115 PF00291 Pyridoxal-phosphate dependent enzyme M1S15_14120 PF01384 Phosphate transporter family M1S15_14125 PF02310 B12 binding domain M1S15_14125 PF02965 Vitamin B12 dependent methionine synthase, activation domain M1S15_14125 PF00809 Pterin binding enzyme M1S15_14125 PF02574 Homocysteine S-methyltransferase M1S15_14125 PF02607 B12 binding domain M1S15_14130 PF02779 Transketolase, pyrimidine binding domain M1S15_14130 PF02780 Transketolase, C-terminal domain M1S15_14135 PF00456 Transketolase, thiamine diphosphate binding domain M1S15_14140 PF07690 Major Facilitator Superfamily M1S15_14150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_14150 PF03466 LysR substrate binding domain M1S15_14160 PF01263 Aldose 1-epimerase M1S15_14165 PF07690 Major Facilitator Superfamily M1S15_14170 PF12833 Helix-turn-helix domain M1S15_14170 PF02311 AraC-like ligand binding domain M1S15_14175 PF04960 Glutaminase M1S15_14180 PF01327 Polypeptide deformylase M1S15_14185 PF07690 Major Facilitator Superfamily M1S15_14195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S15_14195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S15_14195 PF00205 Thiamine pyrophosphate enzyme, central domain M1S15_14200 PF00171 Aldehyde dehydrogenase family M1S15_14205 PF01958 Domain of unknown function DUF108 M1S15_14205 PF03447 Homoserine dehydrogenase, NAD binding domain M1S15_14215 PF12697 Alpha/beta hydrolase family M1S15_14225 PF07690 Major Facilitator Superfamily M1S15_14230 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_14230 PF14759 Reductase C-terminal M1S15_14235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S15_14245 PF00355 Rieske [2Fe-2S] domain M1S15_14255 PF00355 Rieske [2Fe-2S] domain M1S15_14260 PF09339 IclR helix-turn-helix domain M1S15_14260 PF01614 Bacterial transcriptional regulator M1S15_14275 PF00378 Enoyl-CoA hydratase/isomerase M1S15_14285 PF00535 Glycosyl transferase family 2 M1S15_14290 PF14883 Hypothetical glycosyl hydrolase family 13 M1S15_14290 PF01522 Polysaccharide deacetylase M1S15_14295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S15_14300 PF07152 YaeQ protein M1S15_14305 PF00375 Sodium:dicarboxylate symporter family M1S15_14310 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S15_14310 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S15_14320 PF03061 Thioesterase superfamily M1S15_14330 PF02028 BCCT, betaine/carnitine/choline family transporter M1S15_14335 PF02028 BCCT, betaine/carnitine/choline family transporter M1S15_14340 PF00440 Bacterial regulatory proteins, tetR family M1S15_14340 PF13977 BetI-type transcriptional repressor, C-terminal M1S15_14345 PF00171 Aldehyde dehydrogenase family M1S15_14350 PF05199 GMC oxidoreductase M1S15_14350 PF00732 GMC oxidoreductase M1S15_14355 PF06039 Malate:quinone oxidoreductase (Mqo) M1S15_14365 PF02574 Homocysteine S-methyltransferase M1S15_14370 PF13520 Amino acid permease M1S15_14395 PF00701 Dihydrodipicolinate synthetase family M1S15_14400 PF00083 Sugar (and other) transporter M1S15_14470 PF10544 T5orf172 domain M1S15_14475 PF13614 AAA domain M1S15_14495 PF00905 Penicillin binding protein transpeptidase domain M1S15_14575 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S15_14575 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S15_14575 PF02767 DNA polymerase III beta subunit, central domain M1S15_14615 PF05016 ParE toxin of type II toxin-antitoxin system, parDE M1S15_14770 PF07007 Lysozyme inhibitor LprI M1S15_14815 PF01695 IstB-like ATP binding protein M1S15_14825 PF00145 C-5 cytosine-specific DNA methylase M1S15_14870 PF01381 Helix-turn-helix M1S15_14870 PF00717 Peptidase S24-like M1S15_14905 PF00929 Exonuclease M1S15_14980 PF07690 Major Facilitator Superfamily M1S15_14985 PF13533 Biotin-lipoyl like M1S15_14990 PF03061 Thioesterase superfamily M1S15_14995 PF00490 Delta-aminolevulinic acid dehydratase M1S15_15000 PF01266 FAD dependent oxidoreductase M1S15_15005 PF01370 NAD dependent epimerase/dehydratase family M1S15_15005 PF08338 Domain of unknown function (DUF1731) M1S15_15025 PF00149 Calcineurin-like phosphoesterase M1S15_15025 PF12320 Type 5 capsule protein repressor C-terminal domain M1S15_15035 PF01168 Alanine racemase, N-terminal domain M1S15_15040 PF00437 Type II/IV secretion system protein M1S15_15045 PF00437 Type II/IV secretion system protein M1S15_15050 PF01475 Ferric uptake regulator family M1S15_15055 PF04355 SmpA / OmlA family M1S15_15060 PF03658 RnfH family Ubiquitin M1S15_15070 PF01814 Hemerythrin HHE cation binding domain M1S15_15075 PF13230 Glutamine amidotransferases class-II M1S15_15090 PF00696 Amino acid kinase family M1S15_15095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S15_15095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S15_15095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S15_15095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S15_15100 PF00692 dUTPase M1S15_15105 PF00580 UvrD/REP helicase N-terminal domain M1S15_15105 PF13361 UvrD-like helicase C-terminal domain M1S15_15110 PF00691 OmpA family M1S15_15110 PF13488 Glycine zipper M1S15_15115 PF01553 Acyltransferase M1S15_15125 PF03775 Septum formation inhibitor MinC, C-terminal domain M1S15_15130 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M1S15_15135 PF03776 Septum formation topological specificity factor MinE M1S15_15150 PF01810 LysE type translocator M1S15_15155 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M1S15_15155 PF17854 FtsK alpha domain M1S15_15155 PF09397 Ftsk gamma domain M1S15_15155 PF01580 FtsK/SpoIIIE family M1S15_15160 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S15_15165 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M1S15_15170 PF04377 Arginine-tRNA-protein transferase, C terminus M1S15_15170 PF04376 Arginine-tRNA-protein transferase, N terminus M1S15_15175 PF00583 Acetyltransferase (GNAT) family M1S15_15190 PF00009 Elongation factor Tu GTP binding domain M1S15_15190 PF03144 Elongation factor Tu domain 2 M1S15_15190 PF03143 Elongation factor Tu C-terminal domain M1S15_15195 PF00679 Elongation factor G C-terminus M1S15_15195 PF14492 Elongation Factor G, domain II M1S15_15195 PF03764 Elongation factor G, domain IV M1S15_15195 PF03144 Elongation factor Tu domain 2 M1S15_15195 PF00009 Elongation factor Tu GTP binding domain M1S15_15200 PF00177 Ribosomal protein S7p/S5e M1S15_15205 PF00164 Ribosomal protein S12/S23 M1S15_15215 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S15_15215 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S15_15220 PF03653 Uncharacterised protein family (UPF0093) M1S15_15225 PF05726 Pirin C-terminal cupin domain M1S15_15225 PF02678 Pirin M1S15_15235 PF00795 Carbon-nitrogen hydrolase M1S15_15235 PF02540 NAD synthase M1S15_15250 PF00970 Oxidoreductase FAD-binding domain M1S15_15250 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S15_15250 PF00175 Oxidoreductase NAD-binding domain M1S15_15260 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S15_15260 PF00355 Rieske [2Fe-2S] domain M1S15_15265 PF07859 alpha/beta hydrolase fold M1S15_15270 PF02028 BCCT, betaine/carnitine/choline family transporter M1S15_15275 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S15_15280 PF03466 LysR substrate binding domain M1S15_15280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_15300 PF00037 4Fe-4S binding domain M1S15_15305 PF01467 Cytidylyltransferase-like M1S15_15310 PF01668 SmpB protein M1S15_15315 PF03358 NADPH-dependent FMN reductase M1S15_15320 PF02578 Multi-copper polyphenol oxidoreductase laccase M1S15_15325 PF00849 RNA pseudouridylate synthase M1S15_15325 PF01479 S4 domain M1S15_15330 PF13525 Outer membrane lipoprotein M1S15_15335 PF08278 DNA primase DnaG DnaB-binding M1S15_15335 PF10410 DnaB-helicase binding domain of primase M1S15_15335 PF01807 CHC2 zinc finger M1S15_15335 PF08275 DNA primase catalytic core, N-terminal domain M1S15_15340 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M1S15_15340 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M1S15_15340 PF01488 Shikimate / quinate 5-dehydrogenase M1S15_15350 PF03550 Outer membrane lipoprotein LolB M1S15_15355 PF08544 GHMP kinases C terminal M1S15_15355 PF00288 GHMP kinases N terminal domain M1S15_15380 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S15_15380 PF14572 Phosphoribosyl synthetase-associated domain M1S15_15385 PF01386 Ribosomal L25p family M1S15_15390 PF01195 Peptidyl-tRNA hydrolase M1S15_15395 PF02261 Aspartate decarboxylase M1S15_15410 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S15_15420 PF03070 TENA/THI-4/PQQC family M1S15_15420 PF08543 Phosphomethylpyrimidine kinase M1S15_15420 PF02581 Thiamine monophosphate synthase M1S15_15425 PF04972 BON domain M1S15_15425 PF01476 LysM domain M1S15_15430 PF00550 Phosphopantetheine attachment site M1S15_15440 PF00698 Acyl transferase domain M1S15_15445 PF01783 Ribosomal L32p protein family M1S15_15450 PF02620 Large ribosomal RNA subunit accumulation protein YceD M1S15_15455 PF04315 Elongation factor P hydroxylase M1S15_15460 PF01300 Telomere recombination M1S15_15465 PF02616 Segregation and condensation protein ScpA M1S15_15470 PF04079 Segregation and condensation complex subunit ScpB M1S15_15475 PF00849 RNA pseudouridylate synthase M1S15_15475 PF01479 S4 domain M1S15_15490 PF00155 Aminotransferase class I and II M1S15_15495 PF00202 Aminotransferase class-III M1S15_15495 PF04055 Radical SAM superfamily M1S15_15495 PF06968 Biotin and Thiamin Synthesis associated domain M1S15_15500 PF12697 Alpha/beta hydrolase family M1S15_15500 PF08241 Methyltransferase domain M1S15_15505 PF02358 Trehalose-phosphatase M1S15_15510 PF00982 Glycosyltransferase family 20 M1S15_15515 PF07690 Major Facilitator Superfamily M1S15_15520 PF00210 Ferritin-like domain M1S15_15525 PF00533 BRCA1 C Terminus (BRCT) domain M1S15_15525 PF01653 NAD-dependent DNA ligase adenylation domain M1S15_15525 PF03120 NAD-dependent DNA ligase OB-fold domain M1S15_15525 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M1S15_15525 PF12826 Helix-hairpin-helix motif M1S15_15535 PF06470 SMC proteins Flexible Hinge Domain M1S15_15535 PF02463 RecF/RecN/SMC N terminal domain M1S15_15545 PF01925 Sulfite exporter TauE/SafE M1S15_15555 PF03309 Type III pantothenate kinase M1S15_15560 PF00448 SRP54-type protein, GTPase domain M1S15_15560 PF02881 SRP54-type protein, helical bundle domain M1S15_15560 PF02978 Signal peptide binding domain M1S15_15570 PF01207 Dihydrouridine synthase (Dus) M1S15_15600 PF00692 dUTPase M1S15_15615 PF01048 Phosphorylase superfamily M1S15_15620 PF10609 NUBPL iron-transfer P-loop NTPase M1S15_15630 PF09334 tRNA synthetases class I (M) M1S15_15630 PF01588 Putative tRNA binding domain M1S15_15655 PF13533 Biotin-lipoyl like M1S15_15660 PF00291 Pyridoxal-phosphate dependent enzyme M1S15_15675 PF05552 Conserved TM helix M1S15_15690 PF00175 Oxidoreductase NAD-binding domain M1S15_15690 PF00970 Oxidoreductase FAD-binding domain M1S15_15695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_15695 PF03466 LysR substrate binding domain M1S15_15700 PF00313 'Cold-shock' DNA-binding domain M1S15_15710 PF00361 Proton-conducting membrane transporter M1S15_15715 PF00361 Proton-conducting membrane transporter M1S15_15720 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S15_15720 PF00361 Proton-conducting membrane transporter M1S15_15725 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S15_15730 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M1S15_15735 PF12838 4Fe-4S dicluster domain M1S15_15740 PF00146 NADH dehydrogenase M1S15_15745 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M1S15_15745 PF00384 Molybdopterin oxidoreductase M1S15_15745 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S15_15750 PF10531 SLBB domain M1S15_15750 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M1S15_15750 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M1S15_15760 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M1S15_15760 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M1S15_15765 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M1S15_15770 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M1S15_15775 PF17151 Periplasmic sensor domain M1S15_15775 PF00990 Diguanylate cyclase, GGDEF domain M1S15_15785 PF00672 HAMP domain M1S15_15785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_15785 PF00512 His Kinase A (phospho-acceptor) domain M1S15_15790 PF00072 Response regulator receiver domain M1S15_15790 PF00486 Transcriptional regulatory protein, C terminal M1S15_15800 PF03477 ATP cone domain M1S15_15800 PF02867 Ribonucleotide reductase, barrel domain M1S15_15800 PF00317 Ribonucleotide reductase, all-alpha domain M1S15_15810 PF00268 Ribonucleotide reductase, small chain M1S15_15820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_15820 PF00512 His Kinase A (phospho-acceptor) domain M1S15_15820 PF00672 HAMP domain M1S15_15820 PF13756 Stimulus-sensing domain M1S15_15820 PF13755 Sensor N-terminal transmembrane domain M1S15_15890 PF01011 PQQ enzyme repeat M1S15_15890 PF13360 PQQ-like domain M1S15_15915 PF02567 Phenazine biosynthesis-like protein M1S15_15940 PF01613 Flavin reductase like domain M1S15_15945 PF01717 Cobalamin-independent synthase, Catalytic domain M1S15_15945 PF08267 Cobalamin-independent synthase, N-terminal domain M1S15_15955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_15955 PF03466 LysR substrate binding domain M1S15_15960 PF01810 LysE type translocator M1S15_15970 PF12833 Helix-turn-helix domain M1S15_15970 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S15_15975 PF07687 Peptidase dimerisation domain M1S15_15975 PF01546 Peptidase family M20/M25/M40 M1S15_15985 PF03466 LysR substrate binding domain M1S15_15985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_15990 PF07690 Major Facilitator Superfamily M1S15_16000 PF03466 LysR substrate binding domain M1S15_16000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_16005 PF00890 FAD binding domain M1S15_16005 PF14537 Cytochrome c3 M1S15_16015 PF02515 CoA-transferase family III M1S15_16020 PF07690 Major Facilitator Superfamily M1S15_16025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_16025 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_16025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_16030 PF03466 LysR substrate binding domain M1S15_16035 PF08240 Alcohol dehydrogenase GroES-like domain M1S15_16035 PF00107 Zinc-binding dehydrogenase M1S15_16040 PF00962 Adenosine/AMP deaminase M1S15_16065 PF02445 Quinolinate synthetase A protein M1S15_16070 PF01960 ArgJ family M1S15_16075 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S15_16075 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S15_16080 PF00893 Small Multidrug Resistance protein M1S15_16090 PF05275 Copper resistance protein B precursor (CopB) M1S15_16095 PF00394 Multicopper oxidase M1S15_16095 PF07731 Multicopper oxidase M1S15_16095 PF07732 Multicopper oxidase M1S15_16110 PF00834 Ribulose-phosphate 3 epimerase family M1S15_16120 PF00756 Putative esterase M1S15_16130 PF04445 Putative SAM-dependent methyltransferase M1S15_16135 PF00814 Glycoprotease family M1S15_16140 PF00132 Bacterial transferase hexapeptide (six repeats) M1S15_16145 PF00293 NUDIX domain M1S15_16185 PF04715 Anthranilate synthase component I, N terminal region M1S15_16185 PF00425 chorismate binding enzyme M1S15_16190 PF00155 Aminotransferase class I and II M1S15_16195 PF00815 Histidinol dehydrogenase M1S15_16200 PF01634 ATP phosphoribosyltransferase M1S15_16205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S15_16210 PF01722 BolA-like protein M1S15_16215 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M1S15_16220 PF00309 Sigma-54 factor, Activator interacting domain (AID) M1S15_16220 PF04963 Sigma-54 factor, core binding domain M1S15_16220 PF04552 Sigma-54, DNA binding domain M1S15_16265 PF00795 Carbon-nitrogen hydrolase M1S15_16275 PF01047 MarR family M1S15_16280 PF02566 OsmC-like protein M1S15_16285 PF00437 Type II/IV secretion system protein M1S15_16305 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S15_16305 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S15_16305 PF01612 3'-5' exonuclease M1S15_16305 PF00476 DNA polymerase family A M1S15_16310 PF02325 YGGT family M1S15_16315 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S15_16315 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S15_16320 PF01171 PP-loop family M1S15_16320 PF09179 TilS substrate binding domain M1S15_16320 PF11734 TilS substrate C-terminal domain M1S15_16325 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M1S15_16330 PF02541 Ppx/GppA phosphatase family M1S15_16335 PF00085 Thioredoxin M1S15_16340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S15_16340 PF07497 Rho termination factor, RNA-binding domain M1S15_16340 PF07498 Rho termination factor, N-terminal domain M1S15_16355 PF00216 Bacterial DNA-binding protein M1S15_16360 PF01588 Putative tRNA binding domain M1S15_16360 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M1S15_16360 PF03483 B3/4 domain M1S15_16360 PF03484 tRNA synthetase B5 domain M1S15_16360 PF03147 Ferredoxin-fold anticodon binding domain M1S15_16365 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M1S15_16365 PF01409 tRNA synthetases class II core domain (F) M1S15_16385 PF00453 Ribosomal protein L20 M1S15_16390 PF01632 Ribosomal protein L35 M1S15_16400 PF07690 Major Facilitator Superfamily M1S15_16405 PF09335 SNARE associated Golgi protein M1S15_16410 PF00043 Glutathione S-transferase, C-terminal domain M1S15_16410 PF02798 Glutathione S-transferase, N-terminal domain M1S15_16415 PF00707 Translation initiation factor IF-3, C-terminal domain M1S15_16415 PF05198 Translation initiation factor IF-3, N-terminal domain M1S15_16420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S15_16420 PF03129 Anticodon binding domain M1S15_16420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S15_16420 PF02824 TGS domain M1S15_16425 PF00501 AMP-binding enzyme M1S15_16425 PF13193 AMP-binding enzyme C-terminal domain M1S15_16430 PF04751 Protein of unknown function (DUF615) M1S15_16435 PF00381 PTS HPr component phosphorylation site M1S15_16440 PF03668 P-loop ATPase protein family M1S15_16445 PF02569 Pantoate-beta-alanine ligase M1S15_16450 PF02548 Ketopantoate hydroxymethyltransferase M1S15_16455 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M1S15_16460 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S15_16460 PF01743 Poly A polymerase head domain M1S15_16460 PF12626 Polymerase A arginine-rich C-terminus M1S15_16470 PF03819 MazG nucleotide pyrophosphohydrolase domain M1S15_16480 PF13291 ACT domain M1S15_16480 PF04607 Region found in RelA / SpoT proteins M1S15_16480 PF02824 TGS domain M1S15_16485 PF05958 tRNA (Uracil-5-)-methyltransferase M1S15_16495 PF00291 Pyridoxal-phosphate dependent enzyme M1S15_16500 PF00672 HAMP domain M1S15_16500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_16500 PF00512 His Kinase A (phospho-acceptor) domain M1S15_16500 PF01627 Hpt domain M1S15_16500 PF00072 Response regulator receiver domain M1S15_16500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M1S15_16505 PF00378 Enoyl-CoA hydratase/isomerase M1S15_16510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S15_16510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S15_16515 PF01261 Xylose isomerase-like TIM barrel M1S15_16525 PF00106 short chain dehydrogenase M1S15_16530 PF02233 NAD(P) transhydrogenase beta subunit M1S15_16535 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M1S15_16540 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M1S15_16540 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M1S15_16545 PF00892 EamA-like transporter family M1S15_16555 PF07690 Major Facilitator Superfamily M1S15_16560 PF01207 Dihydrouridine synthase (Dus) M1S15_16570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_16570 PF03466 LysR substrate binding domain M1S15_16580 PF00899 ThiF family M1S15_16590 PF00330 Aconitase family (aconitate hydratase) M1S15_16590 PF00694 Aconitase C-terminal domain M1S15_16595 PF01026 TatD related DNase M1S15_16610 PF00009 Elongation factor Tu GTP binding domain M1S15_16610 PF03144 Elongation factor Tu domain 2 M1S15_16610 PF16658 Class II release factor RF3, C-terminal domain M1S15_16630 PF03707 Bacterial signalling protein N terminal repeat M1S15_16630 PF00990 Diguanylate cyclase, GGDEF domain M1S15_16630 PF00563 EAL domain M1S15_16635 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M1S15_16635 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M1S15_16640 PF10369 Small subunit of acetolactate synthase M1S15_16645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S15_16645 PF00205 Thiamine pyrophosphate enzyme, central domain M1S15_16645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S15_16655 PF08264 Anticodon-binding domain of tRNA M1S15_16655 PF00133 tRNA synthetases class I (I, L, M and V) M1S15_16655 PF13603 Leucyl-tRNA synthetase, Domain 2 M1S15_16655 PF09334 tRNA synthetases class I (M) M1S15_16670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S15_16675 PF02687 FtsX-like permease family M1S15_16675 PF12704 MacB-like periplasmic core domain M1S15_16675 PF00005 ABC transporter M1S15_16680 PF02321 Outer membrane efflux protein M1S15_16695 PF00929 Exonuclease M1S15_16700 PF03193 RsgA GTPase M1S15_16710 PF00462 Glutaredoxin M1S15_16715 PF02556 Preprotein translocase subunit SecB M1S15_16730 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S15_16730 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S15_16745 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S15_16745 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S15_16755 PF04820 Tryptophan halogenase M1S15_16775 PF00221 Aromatic amino acid lyase M1S15_16790 PF00501 AMP-binding enzyme M1S15_16790 PF13193 AMP-binding enzyme C-terminal domain M1S15_16800 PF00550 Phosphopantetheine attachment site M1S15_16805 PF00550 Phosphopantetheine attachment site M1S15_16820 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M1S15_16820 PF01926 50S ribosome-binding GTPase M1S15_16825 PF13360 PQQ-like domain M1S15_16835 PF03129 Anticodon binding domain M1S15_16835 PF13393 Histidyl-tRNA synthetase M1S15_16840 PF04551 GcpE protein M1S15_16845 PF13464 Domain of unknown function (DUF4115) M1S15_16855 PF04055 Radical SAM superfamily M1S15_16860 PF00334 Nucleoside diphosphate kinase M1S15_16865 PF04384 Iron-sulphur cluster assembly M1S15_16870 PF01569 PAP2 superfamily M1S15_16875 PF13439 Glycosyltransferase Family 4 M1S15_16875 PF00534 Glycosyl transferases group 1 M1S15_16880 PF11818 C-terminal domain of tail specific protease (DUF3340) M1S15_16880 PF00595 PDZ domain M1S15_16880 PF03572 Peptidase family S41 M1S15_16880 PF17804 Tail specific protease N-terminal domain M1S15_16885 PF00933 Glycosyl hydrolase family 3 N terminal domain M1S15_16895 PF00561 alpha/beta hydrolase fold M1S15_16900 PF00171 Aldehyde dehydrogenase family M1S15_16905 PF00171 Aldehyde dehydrogenase family M1S15_16910 PF01202 Shikimate kinase M1S15_16915 PF02447 GntP family permease M1S15_16920 PF01081 KDPG and KHG aldolase M1S15_16925 PF00920 Dehydratase family M1S15_16930 PF00871 Acetokinase family M1S15_16935 PF07085 DRTGG domain M1S15_16935 PF01515 Phosphate acetyl/butaryl transferase M1S15_16940 PF05681 Fumarate hydratase (Fumerase) M1S15_16940 PF05683 Fumarase C-terminus M1S15_16955 PF07724 AAA domain (Cdc48 subfamily) M1S15_16955 PF10431 C-terminal, D2-small domain, of ClpB protein M1S15_16955 PF06689 ClpX C4-type zinc finger M1S15_16960 PF00574 Clp protease M1S15_16965 PF05697 Bacterial trigger factor protein (TF) M1S15_16965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S15_16965 PF05698 Bacterial trigger factor protein (TF) C-terminus M1S15_16970 PF07715 TonB-dependent Receptor Plug Domain M1S15_16970 PF00593 TonB dependent receptor M1S15_16975 PF13640 2OG-Fe(II) oxygenase superfamily M1S15_16975 PF18331 PKHD-type hydroxylase C-terminal domain M1S15_16980 PF00682 HMGL-like M1S15_16980 PF08502 LeuA allosteric (dimerisation) domain M1S15_16985 PF00561 alpha/beta hydrolase fold M1S15_16990 PF00561 alpha/beta hydrolase fold M1S15_16990 PF07021 Methionine biosynthesis protein MetW M1S15_17000 PF01725 Ham1 family M1S15_17010 PF02416 mttA/Hcf106 family M1S15_17015 PF02416 mttA/Hcf106 family M1S15_17020 PF00902 Sec-independent protein translocase protein (TatC) M1S15_17040 PF01790 Prolipoprotein diacylglyceryl transferase M1S15_17055 PF00303 Thymidylate synthase M1S15_17060 PF00186 Dihydrofolate reductase M1S15_17070 PF01625 Peptide methionine sulfoxide reductase M1S15_17080 PF01618 MotA/TolQ/ExbB proton channel family M1S15_17090 PF01842 ACT domain M1S15_17090 PF00551 Formyl transferase M1S15_17100 PF00171 Aldehyde dehydrogenase family M1S15_17105 PF00830 Ribosomal L28 family M1S15_17110 PF00471 Ribosomal protein L33 M1S15_17115 PF02254 TrkA-N domain M1S15_17115 PF00999 Sodium/hydrogen exchanger family M1S15_17135 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) M1S15_17140 PF13361 UvrD-like helicase C-terminal domain M1S15_17140 PF00580 UvrD/REP helicase N-terminal domain M1S15_17155 PF08272 Topoisomerase I zinc-ribbon-like M1S15_17155 PF01131 DNA topoisomerase M1S15_17155 PF01751 Toprim domain M1S15_17155 PF01396 Topoisomerase DNA binding C4 zinc finger M1S15_17165 PF01638 HxlR-like helix-turn-helix M1S15_17170 PF08240 Alcohol dehydrogenase GroES-like domain M1S15_17170 PF00107 Zinc-binding dehydrogenase M1S15_17175 PF04102 SlyX M1S15_17180 PF00005 ABC transporter M1S15_17180 PF16326 ABC transporter C-terminal domain M1S15_17180 PF12848 ABC transporter M1S15_17185 PF01810 LysE type translocator M1S15_17190 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S15_17200 PF00375 Sodium:dicarboxylate symporter family M1S15_17210 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S15_17210 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S15_17230 PF01416 tRNA pseudouridine synthase M1S15_17240 PF01176 Translation initiation factor 1A / IF-1 M1S15_17255 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S15_17265 PF00694 Aconitase C-terminal domain M1S15_17270 PF00330 Aconitase family (aconitate hydratase) M1S15_17280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_17280 PF03466 LysR substrate binding domain M1S15_17300 PF00293 NUDIX domain M1S15_17305 PF01590 GAF domain M1S15_17305 PF05524 PEP-utilising enzyme, N-terminal M1S15_17305 PF00391 PEP-utilising enzyme, mobile domain M1S15_17305 PF02896 PEP-utilising enzyme, TIM barrel domain M1S15_17310 PF00141 Peroxidase M1S15_17315 PF12706 Beta-lactamase superfamily domain M1S15_17320 PF03466 LysR substrate binding domain M1S15_17320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_17330 PF02798 Glutathione S-transferase, N-terminal domain M1S15_17335 PF08279 HTH domain M1S15_17335 PF13280 WYL domain M1S15_17340 PF13419 Haloacid dehalogenase-like hydrolase M1S15_17345 PF00849 RNA pseudouridylate synthase M1S15_17345 PF01479 S4 domain M1S15_17350 PF00575 S1 RNA binding domain M1S15_17350 PF12111 Polyribonucleotide phosphorylase C terminal M1S15_17350 PF10150 Ribonuclease E/G family M1S15_17355 PF00501 AMP-binding enzyme M1S15_17355 PF13193 AMP-binding enzyme C-terminal domain M1S15_17370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_17370 PF03466 LysR substrate binding domain M1S15_17375 PF00106 short chain dehydrogenase M1S15_17380 PF06969 HemN C-terminal domain M1S15_17380 PF04055 Radical SAM superfamily M1S15_17390 PF01554 MatE M1S15_17395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_17395 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_17395 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S15_17400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_17400 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S15_17405 PF03109 ABC1 family M1S15_17410 PF01197 Ribosomal protein L31 M1S15_17425 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1S15_17445 PF03884 DNA gyrase inhibitor YacG M1S15_17450 PF00753 Metallo-beta-lactamase superfamily M1S15_17455 PF00762 Ferrochelatase M1S15_17465 PF01177 Asp/Glu/Hydantoin racemase M1S15_17480 PF01206 Sulfurtransferase TusA M1S15_17485 PF00571 CBS domain M1S15_17485 PF03471 Transporter associated domain M1S15_17490 PF00795 Carbon-nitrogen hydrolase M1S15_17495 PF01588 Putative tRNA binding domain M1S15_17505 PF07963 Prokaryotic N-terminal methylation motif M1S15_17505 PF08334 Type II secretion system (T2SS), protein G M1S15_17510 PF00482 Type II secretion system (T2SS), protein F M1S15_17515 PF17764 3′ DNA-binding domain (3′BD) M1S15_17515 PF00271 Helicase conserved C-terminal domain M1S15_17515 PF18074 Primosomal protein N C-terminal domain M1S15_17515 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M1S15_17515 PF00270 DEAD/DEAH box helicase M1S15_17520 PF00999 Sodium/hydrogen exchanger family M1S15_17520 PF02254 TrkA-N domain M1S15_17525 PF01430 Hsp33 protein M1S15_17555 PF01544 CorA-like Mg2+ transporter protein M1S15_17560 PF01138 3' exoribonuclease family, domain 1 M1S15_17560 PF03725 3' exoribonuclease family, domain 2 M1S15_17560 PF00575 S1 RNA binding domain M1S15_17560 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M1S15_17560 PF00013 KH domain M1S15_17565 PF00312 Ribosomal protein S15 M1S15_17570 PF00144 Beta-lactamase M1S15_17575 PF13538 UvrD-like helicase C-terminal domain M1S15_17580 PF12705 PD-(D/E)XK nuclease superfamily M1S15_17580 PF13361 UvrD-like helicase C-terminal domain M1S15_17580 PF00580 UvrD/REP helicase N-terminal domain M1S15_17585 PF17946 RecC C-terminal domain M1S15_17595 PF03976 Polyphosphate kinase 2 (PPK2) M1S15_17605 PF01209 ubiE/COQ5 methyltransferase family M1S15_17615 PF03109 ABC1 family M1S15_17620 PF01494 FAD binding domain M1S15_17625 PF01502 Phosphoribosyl-AMP cyclohydrolase M1S15_17640 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S15_17640 PF13244 Domain of unknown function (DUF4040) M1S15_17640 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M1S15_17640 PF00361 Proton-conducting membrane transporter M1S15_17645 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S15_17650 PF00361 Proton-conducting membrane transporter M1S15_17655 PF01899 Na+/H+ ion antiporter subunit M1S15_17660 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M1S15_17665 PF03334 Na+/H+ antiporter subunit M1S15_17670 PF02033 Ribosome-binding factor A M1S15_17675 PF08364 Bacterial translation initiation factor IF-2 associated region M1S15_17675 PF11987 Translation-initiation factor 2 M1S15_17675 PF00009 Elongation factor Tu GTP binding domain M1S15_17675 PF04760 Translation initiation factor IF-2, N-terminal region M1S15_17680 PF00575 S1 RNA binding domain M1S15_17680 PF13184 NusA-like KH domain M1S15_17680 PF08529 NusA N-terminal domain M1S15_17685 PF02576 RimP N-terminal domain M1S15_17685 PF17384 RimP C-terminal SH3 domain M1S15_17705 PF03840 Preprotein translocase SecG subunit M1S15_17710 PF00121 Triosephosphate isomerase M1S15_17715 PF00437 Type II/IV secretion system protein M1S15_17715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S15_17720 PF00482 Type II secretion system (T2SS), protein F M1S15_17730 PF01478 Type IV leader peptidase family M1S15_17730 PF06750 Bacterial Peptidase A24 N-terminal domain M1S15_17745 PF00588 SpoU rRNA Methylase family M1S15_17745 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S15_17750 PF06865 Pyrimidine/purine nucleoside phosphorylase M1S15_17760 PF02463 RecF/RecN/SMC N terminal domain M1S15_17765 PF02622 Uncharacterized ACR, COG1678 M1S15_17770 PF03652 Holliday junction resolvase M1S15_17775 PF13533 Biotin-lipoyl like M1S15_17800 PF02805 Metal binding domain of Ada M1S15_17800 PF12833 Helix-turn-helix domain M1S15_17800 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S15_17800 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S15_17805 PF01066 CDP-alcohol phosphatidyltransferase M1S15_17815 PF01541 GIY-YIG catalytic domain M1S15_17815 PF02151 UvrB/uvrC motif M1S15_17815 PF08459 UvrC Helix-hairpin-helix N-terminal M1S15_17835 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S15_17835 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S15_17835 PF00378 Enoyl-CoA hydratase/isomerase M1S15_17840 PF02803 Thiolase, C-terminal domain M1S15_17840 PF00108 Thiolase, N-terminal domain M1S15_17860 PF00376 MerR family regulatory protein M1S15_17860 PF09278 MerR, DNA binding M1S15_17870 PF01323 DSBA-like thioredoxin domain M1S15_17885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_17885 PF00183 Hsp90 protein M1S15_17900 PF03553 Na+/H+ antiporter family M1S15_17900 PF13726 Na+-H+ antiporter family M1S15_17905 PF00561 alpha/beta hydrolase fold M1S15_17925 PF04997 RNA polymerase Rpb1, domain 1 M1S15_17925 PF00623 RNA polymerase Rpb1, domain 2 M1S15_17925 PF05000 RNA polymerase Rpb1, domain 4 M1S15_17925 PF04998 RNA polymerase Rpb1, domain 5 M1S15_17925 PF04983 RNA polymerase Rpb1, domain 3 M1S15_17930 PF04563 RNA polymerase beta subunit M1S15_17930 PF04561 RNA polymerase Rpb2, domain 2 M1S15_17930 PF04565 RNA polymerase Rpb2, domain 3 M1S15_17930 PF10385 RNA polymerase beta subunit external 1 domain M1S15_17930 PF00562 RNA polymerase Rpb2, domain 6 M1S15_17930 PF04560 RNA polymerase Rpb2, domain 7 M1S15_17935 PF00542 Ribosomal protein L7/L12 C-terminal domain M1S15_17935 PF16320 Ribosomal protein L7/L12 dimerisation domain M1S15_17940 PF00466 Ribosomal protein L10 M1S15_17945 PF00687 Ribosomal protein L1p/L10e family M1S15_17950 PF00298 Ribosomal protein L11, RNA binding domain M1S15_17950 PF03946 Ribosomal protein L11, N-terminal domain M1S15_17955 PF00467 KOW motif M1S15_17955 PF02357 Transcription termination factor nusG M1S15_17960 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M1S15_17970 PF03144 Elongation factor Tu domain 2 M1S15_17970 PF00009 Elongation factor Tu GTP binding domain M1S15_17970 PF03143 Elongation factor Tu C-terminal domain M1S15_17995 PF04715 Anthranilate synthase component I, N terminal region M1S15_17995 PF00425 chorismate binding enzyme M1S15_18000 PF13419 Haloacid dehalogenase-like hydrolase M1S15_18005 PF00498 FHA domain M1S15_18005 PF12401 Protein of unknown function (DUF2662) M1S15_18010 PF00263 Bacterial type II and III secretion system protein M1S15_18010 PF03958 Bacterial type II/III secretion system short domain M1S15_18025 PF00816 H-NS histone family M1S15_18050 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M1S15_18050 PF03900 Porphobilinogen deaminase, C-terminal domain M1S15_18055 PF04397 LytTr DNA-binding domain M1S15_18055 PF00072 Response regulator receiver domain M1S15_18060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_18060 PF06580 Histidine kinase M1S15_18060 PF07694 5TMR of 5TMR-LYT M1S15_18065 PF14698 Argininosuccinate lyase C-terminal M1S15_18065 PF00206 Lyase M1S15_18070 PF04362 Bacterial Fe(2+) trafficking M1S15_18075 PF01895 PhoU domain M1S15_18080 PF02321 Outer membrane efflux protein M1S15_18085 PF00892 EamA-like transporter family M1S15_18100 PF13667 ThiC-associated domain M1S15_18100 PF01964 Radical SAM ThiC family M1S15_18105 PF00293 NUDIX domain M1S15_18110 PF00149 Calcineurin-like phosphoesterase M1S15_18115 PF01258 Prokaryotic dksA/traR C4-type zinc finger M1S15_18120 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S15_18125 PF01098 Cell cycle protein M1S15_18130 PF02875 Mur ligase family, glutamate ligase domain M1S15_18130 PF08245 Mur ligase middle domain M1S15_18140 PF07664 Ferrous iron transport protein B C terminus M1S15_18140 PF02421 Ferrous iron transport protein B M1S15_18140 PF07670 Nucleoside recognition M1S15_18150 PF00589 Phage integrase family M1S15_18150 PF02899 Phage integrase, N-terminal SAM-like domain M1S15_18155 PF10411 Disulfide bond isomerase protein N-terminus M1S15_18155 PF13098 Thioredoxin-like domain M1S15_18160 PF01842 ACT domain M1S15_18160 PF00742 Homoserine dehydrogenase M1S15_18160 PF03447 Homoserine dehydrogenase, NAD binding domain M1S15_18165 PF00291 Pyridoxal-phosphate dependent enzyme M1S15_18170 PF00768 D-alanyl-D-alanine carboxypeptidase M1S15_18175 PF00196 Bacterial regulatory proteins, luxR family M1S15_18175 PF00072 Response regulator receiver domain M1S15_18180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S15_18180 PF00512 His Kinase A (phospho-acceptor) domain M1S15_18185 PF00158 Sigma-54 interaction domain M1S15_18185 PF02954 Bacterial regulatory protein, Fis family M1S15_18185 PF00072 Response regulator receiver domain M1S15_18190 PF00595 PDZ domain M1S15_18190 PF03572 Peptidase family S41 M1S15_18195 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M1S15_18195 PF01676 Metalloenzyme superfamily M1S15_18200 PF03739 Lipopolysaccharide export system permease LptF/LptG M1S15_18210 PF02789 Cytosol aminopeptidase family, N-terminal domain M1S15_18210 PF00883 Cytosol aminopeptidase family, catalytic domain M1S15_18230 PF00677 Lumazine binding domain M1S15_18240 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S15_18240 PF01872 RibD C-terminal domain M1S15_18245 PF03477 ATP cone domain M1S15_18250 PF00909 Ammonium Transporter Family M1S15_18255 PF00543 Nitrogen regulatory protein P-II M1S15_18275 PF01636 Phosphotransferase enzyme family M1S15_18280 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M1S15_18300 PF00440 Bacterial regulatory proteins, tetR family M1S15_18300 PF02909 Tetracyclin repressor-like, C-terminal domain M1S15_18305 PF07690 Major Facilitator Superfamily M1S15_18315 PF01740 STAS domain M1S15_18315 PF00916 Sulfate permease family M1S15_18320 PF00582 Universal stress protein family M1S15_18350 PF00665 Integrase core domain M1S15_18370 PF00589 Phage integrase family M1S15_18370 PF02899 Phage integrase, N-terminal SAM-like domain M1S15_18400 PF01740 STAS domain M1S15_18400 PF00916 Sulfate permease family M1S15_18405 PF00582 Universal stress protein family M1S15_18460 PF02899 Phage integrase, N-terminal SAM-like domain M1S15_18460 PF00589 Phage integrase family M1S15_18490 PF01740 STAS domain M1S15_18490 PF00916 Sulfate permease family M1S15_18495 PF00582 Universal stress protein family M1S15_18515 PF00665 Integrase core domain M1S15_18530 PF00155 Aminotransferase class I and II M1S15_18530 PF00392 Bacterial regulatory proteins, gntR family M1S15_18540 PF00701 Dihydrodipicolinate synthetase family M1S15_18555 PF03573 outer membrane porin, OprD family M1S15_18560 PF00719 Inorganic pyrophosphatase M1S15_18575 PF00501 AMP-binding enzyme M1S15_18575 PF13193 AMP-binding enzyme C-terminal domain M1S15_18580 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S15_18580 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S15_18585 PF07690 Major Facilitator Superfamily M1S15_18590 PF03458 UPF0126 domain M1S15_18595 PF02810 SEC-C motif M1S15_18600 PF03741 Integral membrane protein TerC family M1S15_18600 PF03471 Transporter associated domain M1S15_18605 PF03641 Possible lysine decarboxylase M1S15_18610 PF07690 Major Facilitator Superfamily M1S15_18620 PF00817 impB/mucB/samB family M1S15_18620 PF11799 impB/mucB/samB family C-terminal domain M1S15_18620 PF11798 IMS family HHH motif M1S15_18640 PF11842 Domain of unknown function (DUF3362) M1S15_18640 PF04055 Radical SAM superfamily M1S15_18640 PF08497 Radical SAM N-terminal M1S15_18660 PF03358 NADPH-dependent FMN reductase M1S15_18670 PF00291 Pyridoxal-phosphate dependent enzyme M1S15_18730 PF01327 Polypeptide deformylase M1S15_18740 PF02481 DNA recombination-mediator protein A M1S15_18740 PF17782 DprA winged helix domain M1S15_18745 PF01300 Telomere recombination M1S15_18750 PF00892 EamA-like transporter family M1S15_18755 PF00440 Bacterial regulatory proteins, tetR family M1S15_18760 PF07690 Major Facilitator Superfamily M1S15_18770 PF00255 Glutathione peroxidase M1S15_18780 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M1S15_18785 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S15_18785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S15_18790 PF00231 ATP synthase M1S15_18795 PF00306 ATP synthase alpha/beta chain, C terminal domain M1S15_18795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S15_18795 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S15_18800 PF00213 ATP synthase delta (OSCP) subunit M1S15_18805 PF00430 ATP synthase B/B' CF(0) M1S15_18810 PF00137 ATP synthase subunit C M1S15_18815 PF00119 ATP synthase A chain M1S15_18835 PF00005 ABC transporter M1S15_18840 PF00950 ABC 3 transport family M1S15_18845 PF01810 LysE type translocator M1S15_18850 PF04261 Dyp-type peroxidase family M1S15_18860 PF00390 Malic enzyme, N-terminal domain M1S15_18860 PF03949 Malic enzyme, NAD binding domain M1S15_18865 PF03485 Arginyl tRNA synthetase N terminal domain M1S15_18865 PF05746 DALR anticodon binding domain M1S15_18865 PF00750 tRNA synthetases class I (R) M1S15_18885 PF02678 Pirin M1S15_18885 PF05726 Pirin C-terminal cupin domain M1S15_18895 PF03551 Transcriptional regulator PadR-like family M1S15_18900 PF13427 Domain of unknown function (DUF4111) M1S15_18900 PF01909 Nucleotidyltransferase domain M1S15_18905 PF00117 Glutamine amidotransferase class-I M1S15_18905 PF00958 GMP synthase C terminal domain M1S15_18905 PF02540 NAD synthase M1S15_18910 PF04286 Protein of unknown function (DUF445) M1S15_18915 PF07681 DoxX M1S15_18920 PF09335 SNARE associated Golgi protein M1S15_18935 PF13614 AAA domain M1S15_18945 PF01722 BolA-like protein M1S15_18960 PF01648 4'-phosphopantetheinyl transferase superfamily M1S15_18965 PF12697 Alpha/beta hydrolase family M1S15_18985 PF16197 Ketoacyl-synthetase C-terminal extension M1S15_18985 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S15_18985 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S15_18985 PF00975 Thioesterase domain M1S15_18985 PF14765 Polyketide synthase dehydratase M1S15_18985 PF08242 Methyltransferase domain M1S15_18985 PF00550 Phosphopantetheine attachment site M1S15_18990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_18990 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_18990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_18995 PF00501 AMP-binding enzyme M1S15_19000 PF03472 Autoinducer binding domain M1S15_19000 PF00196 Bacterial regulatory proteins, luxR family M1S15_19010 PF00765 Autoinducer synthase M1S15_19015 PF07690 Major Facilitator Superfamily M1S15_19015 PF00083 Sugar (and other) transporter M1S15_19020 PF00378 Enoyl-CoA hydratase/isomerase M1S15_19025 PF00378 Enoyl-CoA hydratase/isomerase M1S15_19030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S15_19030 PF02770 Acyl-CoA dehydrogenase, middle domain M1S15_19030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S15_19035 PF13193 AMP-binding enzyme C-terminal domain M1S15_19035 PF00501 AMP-binding enzyme M1S15_19040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S15_19040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S15_19045 PF00171 Aldehyde dehydrogenase family M1S15_19055 PF00324 Amino acid permease M1S15_19060 PF00324 Amino acid permease M1S15_19065 PF01042 Endoribonuclease L-PSP M1S15_19070 PF00842 Alanine racemase, C-terminal domain M1S15_19070 PF01168 Alanine racemase, N-terminal domain M1S15_19075 PF01266 FAD dependent oxidoreductase M1S15_19080 PF01037 Lrp/AsnC ligand binding domain M1S15_19090 PF00593 TonB dependent receptor M1S15_19090 PF07715 TonB-dependent Receptor Plug Domain M1S15_19105 PF00849 RNA pseudouridylate synthase M1S15_19120 PF00440 Bacterial regulatory proteins, tetR family M1S15_19120 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S15_19130 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S15_19130 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S15_19165 PF00694 Aconitase C-terminal domain M1S15_19165 PF00330 Aconitase family (aconitate hydratase) M1S15_19170 PF00285 Citrate synthase, C-terminal domain M1S15_19180 PF07729 FCD domain M1S15_19180 PF00392 Bacterial regulatory proteins, gntR family M1S15_19190 PF00155 Aminotransferase class I and II M1S15_19195 PF01565 FAD binding domain M1S15_19195 PF09330 D-lactate dehydrogenase, membrane binding M1S15_19200 PF01070 FMN-dependent dehydrogenase M1S15_19205 PF07729 FCD domain M1S15_19205 PF00392 Bacterial regulatory proteins, gntR family M1S15_19210 PF02652 L-lactate permease M1S15_19215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S15_19215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S15_19215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S15_19215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S15_19220 PF16363 GDP-mannose 4,6 dehydratase M1S15_19225 PF00342 Phosphoglucose isomerase M1S15_19230 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S15_19230 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S15_19230 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S15_19235 PF00483 Nucleotidyl transferase M1S15_19240 PF02397 Bacterial sugar transferase M1S15_19245 PF00535 Glycosyl transferase family 2 M1S15_19275 PF08666 SAF domain M1S15_19275 PF03102 NeuB family M1S15_19290 PF02348 Cytidylyltransferase M1S15_19295 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M1S15_19300 PF02719 Polysaccharide biosynthesis protein M1S15_19305 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S15_19305 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S15_19305 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S15_19310 PF10531 SLBB domain M1S15_19310 PF02563 Polysaccharide biosynthesis/export protein M1S15_19310 PF18412 Outer-membrane lipoprotein Wza C-terminal domain M1S15_19315 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S15_19320 PF13807 G-rich domain on putative tyrosine kinase M1S15_19320 PF02706 Chain length determinant protein M1S15_19320 PF13614 AAA domain M1S15_19325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S15_19325 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S15_19330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S15_19330 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S15_19335 PF03023 Lipid II flippase MurJ M1S15_19340 PF01510 N-acetylmuramoyl-L-alanine amidase M1S15_19345 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M1S15_19345 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M1S15_19355 PF05506 Domain of unknown function (DUF756) M1S15_19355 PF04185 Phosphoesterase family M1S15_19365 PF01138 3' exoribonuclease family, domain 1 M1S15_19365 PF03725 3' exoribonuclease family, domain 2 M1S15_19370 PF00487 Fatty acid desaturase M1S15_19375 PF00175 Oxidoreductase NAD-binding domain M1S15_19380 PF00440 Bacterial regulatory proteins, tetR family M1S15_19385 PF08360 QacR-like protein, C-terminal region M1S15_19385 PF00440 Bacterial regulatory proteins, tetR family M1S15_19390 PF01323 DSBA-like thioredoxin domain M1S15_19400 PF13419 Haloacid dehalogenase-like hydrolase M1S15_19405 PF00106 short chain dehydrogenase M1S15_19420 PF00696 Amino acid kinase family M1S15_19420 PF00583 Acetyltransferase (GNAT) family M1S15_19425 PF09084 NMT1/THI5 like M1S15_19430 PF09084 NMT1/THI5 like M1S15_19435 PF00296 Luciferase-like monooxygenase M1S15_19440 PF00528 Binding-protein-dependent transport system inner membrane component M1S15_19445 PF00005 ABC transporter M1S15_19450 PF08362 YcdC-like protein, C-terminal region M1S15_19450 PF00440 Bacterial regulatory proteins, tetR family M1S15_19455 PF01048 Phosphorylase superfamily M1S15_19465 PF01687 Riboflavin kinase M1S15_19465 PF06574 FAD synthetase M1S15_19470 PF00133 tRNA synthetases class I (I, L, M and V) M1S15_19470 PF06827 Zinc finger found in FPG and IleRS M1S15_19470 PF08264 Anticodon-binding domain of tRNA M1S15_19475 PF01252 Signal peptidase (SPase) II M1S15_19480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S15_19520 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S15_19525 PF07859 alpha/beta hydrolase fold M1S15_19545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S15_19545 PF03466 LysR substrate binding domain M1S15_19550 PF01025 GrpE M1S15_19555 PF00012 Hsp70 protein M1S15_19575 PF13406 Transglycosylase SLT domain M1S15_19580 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M1S15_19580 PF02222 ATP-grasp domain M1S15_19585 PF00731 AIR carboxylase M1S15_19595 PF01225 Mur ligase family, catalytic domain M1S15_19595 PF08245 Mur ligase middle domain M1S15_19595 PF02875 Mur ligase family, glutamate ligase domain M1S15_19605 PF01569 PAP2 superfamily M1S15_19610 PF03741 Integral membrane protein TerC family M1S15_19620 PF03738 Glutathionylspermidine synthase preATP-grasp M1S15_19625 PF00355 Rieske [2Fe-2S] domain M1S15_19630 PF01979 Amidohydrolase family M1S15_19635 PF00156 Phosphoribosyl transferase domain M1S15_19645 PF10411 Disulfide bond isomerase protein N-terminus M1S15_19645 PF13098 Thioredoxin-like domain M1S15_19650 PF01545 Cation efflux family M1S15_19650 PF16916 Dimerisation domain of Zinc Transporter M1S15_19655 PF02583 Metal-sensitive transcriptional repressor M1S15_19660 PF01926 50S ribosome-binding GTPase M1S15_19660 PF12631 MnmE helical domain M1S15_19660 PF10396 GTP-binding protein TrmE N-terminus M1S15_19665 PF02096 60Kd inner membrane protein M1S15_19665 PF14849 YidC periplasmic domain M1S15_19670 PF01809 Putative membrane protein insertion efficiency factor M1S15_19675 PF00825 Ribonuclease P M1S15_19680 PF00468 Ribosomal protein L34 M1S15_19705 PF01807 CHC2 zinc finger M1S15_19705 PF08275 DNA primase catalytic core, N-terminal domain M1S15_19705 PF10410 DnaB-helicase binding domain of primase M1S15_19735 PF00625 Guanylate kinase M1S15_19750 PF07015 VirC1 protein M1S15_19760 PF00589 Phage integrase family M1S15_19760 PF02899 Phage integrase, N-terminal SAM-like domain M1S15_19795 PF02811 PHP domain M1S15_19795 PF14579 Helix-hairpin-helix motif M1S15_19795 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S15_19795 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S15_19805 PF02811 PHP domain M1S15_19805 PF14579 Helix-hairpin-helix motif M1S15_19805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S15_19805 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S15_19820 PF01612 3'-5' exonuclease M1S15_19820 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S15_19820 PF00476 DNA polymerase family A M1S15_19820 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S15_19825 PF00154 recA bacterial DNA recombination protein M1S15_19825 PF03161 LAGLIDADG DNA endonuclease family M1S15_19850 PF02463 RecF/RecN/SMC N terminal domain M1S15_19850 PF06470 SMC proteins Flexible Hinge Domain M1S15_19870 PF02867 Ribonucleotide reductase, barrel domain M1S15_19870 PF03477 ATP cone domain M1S15_19870 PF00317 Ribonucleotide reductase, all-alpha domain M1S15_19875 PF00268 Ribonucleotide reductase, small chain M1S15_19915 PF00929 Exonuclease M1S15_19950 PF13737 Transposase DDE domain M1S15_19960 PF00440 Bacterial regulatory proteins, tetR family M1S15_19960 PF16925 Tetracyclin repressor-like, C-terminal domain M1S15_19970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S15_19980 PF00465 Iron-containing alcohol dehydrogenase M1S15_19995 PF00756 Putative esterase M1S15_20000 PF08240 Alcohol dehydrogenase GroES-like domain M1S15_20000 PF00107 Zinc-binding dehydrogenase M1S15_20005 PF02583 Metal-sensitive transcriptional repressor M1S15_20020 PF00107 Zinc-binding dehydrogenase M1S15_20020 PF08240 Alcohol dehydrogenase GroES-like domain M1S15_20020 PF13823 Alcohol dehydrogenase GroES-associated M1S15_20085 PF02216 B domain M1S15_20085 PF00746 LPXTG cell wall anchor motif M1S15_20085 PF01476 LysM domain M1S15_20085 PF03373 Octapeptide repeat M1S15_20085 PF04650 YSIRK type signal peptide M1S15_20100 PF02559 CarD-like/TRCF domain M1S15_20100 PF00270 DEAD/DEAH box helicase M1S15_20100 PF00271 Helicase conserved C-terminal domain M1S15_20100 PF03461 TRCF domain M1S15_20100 PF17757 UvrB interaction domain M1S15_20120 PF00005 ABC transporter M1S15_20120 PF09383 NIL domain