locus-tag class description M1S50_00005 PF00308 Bacterial dnaA protein M1S50_00005 PF08299 Bacterial dnaA protein helix-turn-helix M1S50_00005 PF11638 DnaA N-terminal domain M1S50_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S50_00010 PF02767 DNA polymerase III beta subunit, central domain M1S50_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S50_00015 PF02463 RecF/RecN/SMC N terminal domain M1S50_00020 PF00204 DNA gyrase B M1S50_00020 PF00986 DNA gyrase B subunit, carboxyl terminus M1S50_00020 PF18053 DNA gyrase B subunit insert domain M1S50_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_00020 PF01751 Toprim domain M1S50_00030 PF09335 SNARE associated Golgi protein M1S50_00035 PF00005 ABC transporter M1S50_00035 PF12848 ABC transporter M1S50_00055 PF01521 Iron-sulphur cluster biosynthesis M1S50_00060 PF00561 alpha/beta hydrolase fold M1S50_00065 PF03702 Anhydro-N-acetylmuramic acid kinase M1S50_00070 PF00579 tRNA synthetases class I (W and Y) M1S50_00110 PF00209 Sodium:neurotransmitter symporter family M1S50_00120 PF01189 16S rRNA methyltransferase RsmB/F M1S50_00120 PF01029 NusB family M1S50_00125 PF02911 Formyl transferase, C-terminal domain M1S50_00125 PF00551 Formyl transferase M1S50_00130 PF00920 Dehydratase family M1S50_00145 PF03466 LysR substrate binding domain M1S50_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_00150 PF00860 Permease family M1S50_00155 PF00311 Phosphoenolpyruvate carboxylase M1S50_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S50_00160 PF00440 Bacterial regulatory proteins, tetR family M1S50_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S50_00170 PF00873 AcrB/AcrD/AcrF family M1S50_00180 PF00226 DnaJ domain M1S50_00180 PF00684 DnaJ central domain M1S50_00180 PF01556 DnaJ C terminal domain M1S50_00190 PF01113 Dihydrodipicolinate reductase, N-terminus M1S50_00190 PF05173 Dihydrodipicolinate reductase, C-terminus M1S50_00200 PF07690 Major Facilitator Superfamily M1S50_00205 PF00248 Aldo/keto reductase family M1S50_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_00210 PF03466 LysR substrate binding domain M1S50_00225 PF00392 Bacterial regulatory proteins, gntR family M1S50_00225 PF00155 Aminotransferase class I and II M1S50_00230 PF08240 Alcohol dehydrogenase GroES-like domain M1S50_00230 PF00107 Zinc-binding dehydrogenase M1S50_00235 PF03352 Methyladenine glycosylase M1S50_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S50_00250 PF14815 NUDIX domain M1S50_00250 PF10576 Iron-sulfur binding domain of endonuclease III M1S50_00250 PF00633 Helix-hairpin-helix motif M1S50_00265 PF07043 Protein of unknown function (DUF1328) M1S50_00270 PF03692 Putative zinc- or iron-chelating domain M1S50_00275 PF07995 Glucose / Sorbosone dehydrogenase M1S50_00280 PF00004 ATPase family associated with various cellular activities (AAA) M1S50_00280 PF16193 AAA C-terminal domain M1S50_00280 PF12002 MgsA AAA+ ATPase C terminal M1S50_00285 PF01226 Formate/nitrite transporter M1S50_00295 PF01259 SAICAR synthetase M1S50_00305 PF00701 Dihydrodipicolinate synthetase family M1S50_00310 PF00857 Isochorismatase family M1S50_00315 PF01758 Sodium Bile acid symporter family M1S50_00320 PF01554 MatE M1S50_00325 PF04463 Protein of unknown function (DUF523) M1S50_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S50_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S50_00345 PF02798 Glutathione S-transferase, N-terminal domain M1S50_00345 PF14497 Glutathione S-transferase, C-terminal domain M1S50_00355 PF00324 Amino acid permease M1S50_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S50_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S50_00375 PF00392 Bacterial regulatory proteins, gntR family M1S50_00375 PF07702 UTRA domain M1S50_00380 PF05962 HutD M1S50_00385 PF17391 Urocanase N-terminal domain M1S50_00385 PF17392 Urocanase C-terminal domain M1S50_00385 PF01175 Urocanase Rossmann-like domain M1S50_00390 PF00221 Aromatic amino acid lyase M1S50_00395 PF00324 Amino acid permease M1S50_00400 PF01979 Amidohydrolase family M1S50_00405 PF00491 Arginase family M1S50_00425 PF01380 SIS domain M1S50_00430 PF00132 Bacterial transferase hexapeptide (six repeats) M1S50_00430 PF14602 Hexapeptide repeat of succinyl-transferase M1S50_00430 PF12804 MobA-like NTP transferase domain M1S50_00435 PF04608 Phosphatidylglycerophosphatase A M1S50_00440 PF02769 AIR synthase related protein, C-terminal domain M1S50_00440 PF00586 AIR synthase related protein, N-terminal domain M1S50_00445 PF01029 NusB family M1S50_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase M1S50_00455 PF00925 GTP cyclohydrolase II M1S50_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S50_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase M1S50_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S50_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M1S50_00490 PF00581 Rhodanese-like domain M1S50_00495 PF02666 Phosphatidylserine decarboxylase M1S50_00500 PF03069 Acetamidase/Formamidase family M1S50_00520 PF11808 Phosphate regulon sensor protein PhoR M1S50_00520 PF00989 PAS fold M1S50_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_00520 PF00512 His Kinase A (phospho-acceptor) domain M1S50_00525 PF00486 Transcriptional regulatory protein, C terminal M1S50_00525 PF00072 Response regulator receiver domain M1S50_00535 PF00106 short chain dehydrogenase M1S50_00540 PF01554 MatE M1S50_00545 PF00155 Aminotransferase class I and II M1S50_00550 PF04286 Protein of unknown function (DUF445) M1S50_00565 PF04262 Glutamate-cysteine ligase M1S50_00570 PF02600 Disulfide bond formation protein DsbB M1S50_00575 PF04717 Type VI secretion system, phage-baseplate injector M1S50_00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S50_00575 PF13296 Putative type VI secretion system Rhs element Vgr M1S50_00580 PF00877 NlpC/P60 family M1S50_00580 PF01476 LysM domain M1S50_00595 PF05728 Uncharacterised protein family (UPF0227) M1S50_00600 PF01751 Toprim domain M1S50_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_00600 PF00986 DNA gyrase B subunit, carboxyl terminus M1S50_00600 PF00204 DNA gyrase B M1S50_00605 PF00106 short chain dehydrogenase M1S50_00610 PF04115 Ureidoglycolate lyase M1S50_00615 PF03561 Allantoicase repeat M1S50_00620 PF01494 FAD binding domain M1S50_00630 PF00860 Permease family M1S50_00635 PF00576 HIUase/Transthyretin family M1S50_00665 PF11412 Disulphide bond corrector protein DsbC M1S50_00665 PF02683 Cytochrome C biogenesis protein transmembrane region M1S50_00670 PF00990 Diguanylate cyclase, GGDEF domain M1S50_00670 PF07694 5TMR of 5TMR-LYT M1S50_00675 PF07859 alpha/beta hydrolase fold M1S50_00685 PF03960 ArsC family M1S50_00690 PF03372 Endonuclease/Exonuclease/phosphatase family M1S50_00695 PF00156 Phosphoribosyl transferase domain M1S50_00700 PF00593 TonB dependent receptor M1S50_00700 PF07715 TonB-dependent Receptor Plug Domain M1S50_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M1S50_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M1S50_00715 PF03033 Glycosyltransferase family 28 N-terminal domain M1S50_00715 PF04101 Glycosyltransferase family 28 C-terminal domain M1S50_00720 PF08245 Mur ligase middle domain M1S50_00720 PF02875 Mur ligase family, glutamate ligase domain M1S50_00720 PF01225 Mur ligase family, catalytic domain M1S50_00725 PF07478 D-ala D-ala ligase C-terminus M1S50_00725 PF01820 D-ala D-ala ligase N-terminus M1S50_00730 PF08478 POTRA domain, FtsQ-type M1S50_00730 PF03799 Cell division protein FtsQ M1S50_00735 PF02491 SHS2 domain inserted in FTSA M1S50_00740 PF00091 Tubulin/FtsZ family, GTPase domain M1S50_00740 PF12327 FtsZ family, C-terminal domain M1S50_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M1S50_00755 PF01551 Peptidase family M23 M1S50_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain M1S50_00760 PF00456 Transketolase, thiamine diphosphate binding domain M1S50_00765 PF02817 e3 binding domain M1S50_00765 PF00364 Biotin-requiring enzyme M1S50_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S50_00775 PF01169 Uncharacterized protein family UPF0016 M1S50_00795 PF00258 Flavodoxin M1S50_00795 PF01613 Flavin reductase like domain M1S50_00800 PF03692 Putative zinc- or iron-chelating domain M1S50_00805 PF00478 IMP dehydrogenase / GMP reductase domain M1S50_00805 PF00571 CBS domain M1S50_00810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S50_00810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S50_00810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S50_00810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S50_00815 PF01243 Pyridoxamine 5'-phosphate oxidase M1S50_00815 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M1S50_00820 PF02272 DHHA1 domain M1S50_00820 PF01368 DHH family M1S50_00820 PF17768 RecJ OB domain M1S50_00840 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S50_00845 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M1S50_00850 PF04452 RNA methyltransferase M1S50_00855 PF00924 Mechanosensitive ion channel M1S50_00865 PF13193 AMP-binding enzyme C-terminal domain M1S50_00865 PF00501 AMP-binding enzyme M1S50_00865 PF16177 Acetyl-coenzyme A synthetase N-terminus M1S50_00870 PF00857 Isochorismatase family M1S50_00875 PF01037 Lrp/AsnC ligand binding domain M1S50_00880 PF00872 Transposase, Mutator family M1S50_00885 PF00296 Luciferase-like monooxygenase M1S50_00890 PF03358 NADPH-dependent FMN reductase M1S50_00895 PF00072 Response regulator receiver domain M1S50_00895 PF00196 Bacterial regulatory proteins, luxR family M1S50_00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_00905 PF00672 HAMP domain M1S50_00905 PF00072 Response regulator receiver domain M1S50_00905 PF00512 His Kinase A (phospho-acceptor) domain M1S50_00905 PF01627 Hpt domain M1S50_00910 PF04341 Protein of unknown function, DUF485 M1S50_00915 PF00474 Sodium:solute symporter family M1S50_00925 PF02028 BCCT, betaine/carnitine/choline family transporter M1S50_00935 PF00990 Diguanylate cyclase, GGDEF domain M1S50_00945 PF00005 ABC transporter M1S50_00945 PF17755 UvrA DNA-binding domain M1S50_00945 PF17760 UvrA interaction domain M1S50_00950 PF16925 Tetracyclin repressor-like, C-terminal domain M1S50_00950 PF00440 Bacterial regulatory proteins, tetR family M1S50_00955 PF08240 Alcohol dehydrogenase GroES-like domain M1S50_00955 PF00107 Zinc-binding dehydrogenase M1S50_00965 PF06942 GlpM protein M1S50_00970 PF08543 Phosphomethylpyrimidine kinase M1S50_00970 PF02581 Thiamine monophosphate synthase M1S50_00970 PF03070 TENA/THI-4/PQQC family M1S50_00980 PF07690 Major Facilitator Superfamily M1S50_00985 PF00436 Single-strand binding protein family M1S50_00995 PF03591 AzlC protein M1S50_01005 PF00324 Amino acid permease M1S50_01010 PF00392 Bacterial regulatory proteins, gntR family M1S50_01010 PF00155 Aminotransferase class I and II M1S50_01015 PF00202 Aminotransferase class-III M1S50_01020 PF00171 Aldehyde dehydrogenase family M1S50_01025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_01030 PF00857 Isochorismatase family M1S50_01035 PF05726 Pirin C-terminal cupin domain M1S50_01035 PF02678 Pirin M1S50_01040 PF01593 Flavin containing amine oxidoreductase M1S50_01060 PF07690 Major Facilitator Superfamily M1S50_01065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_01065 PF03466 LysR substrate binding domain M1S50_01085 PF00248 Aldo/keto reductase family M1S50_01090 PF12833 Helix-turn-helix domain M1S50_01090 PF02311 AraC-like ligand binding domain M1S50_01120 PF01638 HxlR-like helix-turn-helix M1S50_01125 PF02525 Flavodoxin-like fold M1S50_01150 PF02705 K+ potassium transporter M1S50_01175 PF00230 Major intrinsic protein M1S50_01190 PF00977 Histidine biosynthesis protein M1S50_01195 PF01636 Phosphotransferase enzyme family M1S50_01210 PF03992 Antibiotic biosynthesis monooxygenase M1S50_01225 PF00977 Histidine biosynthesis protein M1S50_01240 PF00117 Glutamine amidotransferase class-I M1S50_01245 PF00475 Imidazoleglycerol-phosphate dehydratase M1S50_01265 PF00583 Acetyltransferase (GNAT) family M1S50_01270 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M1S50_01270 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M1S50_01280 PF00512 His Kinase A (phospho-acceptor) domain M1S50_01280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_01280 PF00672 HAMP domain M1S50_01285 PF00486 Transcriptional regulatory protein, C terminal M1S50_01285 PF00072 Response regulator receiver domain M1S50_01290 PF17674 HHH domain M1S50_01290 PF00575 S1 RNA binding domain M1S50_01290 PF09371 Tex-like protein N-terminal domain M1S50_01290 PF16921 Tex protein YqgF-like domain M1S50_01295 PF00916 Sulfate permease family M1S50_01295 PF01740 STAS domain M1S50_01300 PF00106 short chain dehydrogenase M1S50_01305 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S50_01310 PF12848 ABC transporter M1S50_01310 PF00005 ABC transporter M1S50_01335 PF04191 Phospholipid methyltransferase M1S50_01355 PF00529 HlyD membrane-fusion protein of T1SS M1S50_01355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S50_01360 PF00873 AcrB/AcrD/AcrF family M1S50_01365 PF01545 Cation efflux family M1S50_01395 PF00324 Amino acid permease M1S50_01410 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S50_01425 PF01795 MraW methylase family M1S50_01435 PF00905 Penicillin binding protein transpeptidase domain M1S50_01435 PF03717 Penicillin-binding Protein dimerisation domain M1S50_01440 PF01225 Mur ligase family, catalytic domain M1S50_01440 PF02875 Mur ligase family, glutamate ligase domain M1S50_01440 PF08245 Mur ligase middle domain M1S50_01445 PF01225 Mur ligase family, catalytic domain M1S50_01445 PF02875 Mur ligase family, glutamate ligase domain M1S50_01445 PF08245 Mur ligase middle domain M1S50_01450 PF00953 Glycosyl transferase family 4 M1S50_01460 PF13847 Methyltransferase domain M1S50_01465 PF17092 Penicillin-binding protein OB-like domain M1S50_01465 PF00912 Transglycosylase M1S50_01465 PF00905 Penicillin binding protein transpeptidase domain M1S50_01470 PF11104 Type IV pilus assembly protein PilM; M1S50_01475 PF05137 Fimbrial assembly protein (PilN) M1S50_01480 PF04350 Pilus assembly protein, PilO M1S50_01490 PF11741 AMIN domain M1S50_01490 PF03958 Bacterial type II/III secretion system short domain M1S50_01490 PF00263 Bacterial type II and III secretion system protein M1S50_01490 PF07660 Secretin and TonB N terminus short domain M1S50_01495 PF01202 Shikimate kinase M1S50_01500 PF01761 3-dehydroquinate synthase M1S50_01510 PF04898 Glutamate synthase central domain M1S50_01510 PF01645 Conserved region in glutamate synthase M1S50_01510 PF01493 GXGXG motif M1S50_01510 PF00310 Glutamine amidotransferases class-II M1S50_01515 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M1S50_01515 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_01525 PF04011 LemA family M1S50_01530 PF04536 TPM domain M1S50_01540 PF07963 Prokaryotic N-terminal methylation motif M1S50_01540 PF00114 Pilin (bacterial filament) M1S50_01550 PF15864 Protein glycosylation ligase M1S50_01550 PF04932 O-Antigen ligase M1S50_01550 PF11846 Virulence factor membrane-bound polymerase, C-terminal M1S50_01555 PF00210 Ferritin-like domain M1S50_01560 PF04324 BFD-like [2Fe-2S] binding domain M1S50_01565 PF01042 Endoribonuclease L-PSP M1S50_01570 PF13291 ACT domain M1S50_01570 PF02824 TGS domain M1S50_01570 PF04607 Region found in RelA / SpoT proteins M1S50_01580 PF01192 RNA polymerase Rpb6 M1S50_01585 PF00625 Guanylate kinase M1S50_01590 PF02401 LytB protein M1S50_01630 PF00886 Ribosomal protein S16 M1S50_01635 PF01782 RimM N-terminal domain M1S50_01635 PF05239 PRC-barrel domain M1S50_01640 PF01746 tRNA (Guanine-1)-methyltransferase M1S50_01645 PF01245 Ribosomal protein L19 M1S50_01650 PF00561 alpha/beta hydrolase fold M1S50_01655 PF03280 Proteobacterial lipase chaperone protein M1S50_01660 PF01509 TruB family pseudouridylate synthase (N terminal domain) M1S50_01660 PF16198 tRNA pseudouridylate synthase B C-terminal domain M1S50_01660 PF09157 Pseudouridine synthase II TruB, C-terminal M1S50_01675 PF00892 EamA-like transporter family M1S50_01680 PF00892 EamA-like transporter family M1S50_01685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S50_01685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S50_01690 PF02913 FAD linked oxidases, C-terminal domain M1S50_01690 PF01565 FAD binding domain M1S50_01700 PF03992 Antibiotic biosynthesis monooxygenase M1S50_01705 PF02525 Flavodoxin-like fold M1S50_01715 PF07690 Major Facilitator Superfamily M1S50_01720 PF12805 FUSC-like inner membrane protein yccS M1S50_01725 PF00080 Copper/zinc superoxide dismutase (SODC) M1S50_01730 PF01594 AI-2E family transporter M1S50_01735 PF13614 AAA domain M1S50_01765 PF00324 Amino acid permease M1S50_01770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S50_01770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S50_01775 PF00202 Aminotransferase class-III M1S50_01780 PF04958 Arginine N-succinyltransferase beta subunit M1S50_01785 PF00171 Aldehyde dehydrogenase family M1S50_01790 PF04996 Succinylarginine dihydrolase M1S50_01795 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M1S50_01810 PF05922 Peptidase inhibitor I9 M1S50_01810 PF00082 Subtilase family M1S50_01825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_01825 PF03466 LysR substrate binding domain M1S50_01830 PF00892 EamA-like transporter family M1S50_01840 PF02092 Glycyl-tRNA synthetase beta subunit M1S50_01840 PF05746 DALR anticodon binding domain M1S50_01845 PF02091 Glycyl-tRNA synthetase alpha subunit M1S50_01870 PF00571 CBS domain M1S50_01875 PF04024 PspC domain M1S50_01885 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S50_01885 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_01885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_01885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_01895 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M1S50_01895 PF08501 Shikimate dehydrogenase substrate binding domain M1S50_01895 PF01488 Shikimate / quinate 5-dehydrogenase M1S50_01900 PF01218 Coproporphyrinogen III oxidase M1S50_01905 PF00925 GTP cyclohydrolase II M1S50_01910 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M1S50_01910 PF02779 Transketolase, pyrimidine binding domain M1S50_01910 PF02780 Transketolase, C-terminal domain M1S50_01915 PF00459 Inositol monophosphatase family M1S50_01920 PF03880 DbpA RNA binding domain M1S50_01920 PF00270 DEAD/DEAH box helicase M1S50_01920 PF12343 Cold shock protein DEAD box A M1S50_01920 PF00271 Helicase conserved C-terminal domain M1S50_01930 PF00005 ABC transporter M1S50_01935 PF02405 Permease MlaE M1S50_01945 PF05494 MlaC protein M1S50_01955 PF01544 CorA-like Mg2+ transporter protein M1S50_01960 PF03641 Possible lysine decarboxylase M1S50_01965 PF00293 NUDIX domain M1S50_01970 PF00156 Phosphoribosyl transferase domain M1S50_01975 PF00270 DEAD/DEAH box helicase M1S50_01975 PF00271 Helicase conserved C-terminal domain M1S50_01975 PF17191 RecG wedge domain M1S50_01990 PF01553 Acyltransferase M1S50_02000 PF00375 Sodium:dicarboxylate symporter family M1S50_02010 PF01926 50S ribosome-binding GTPase M1S50_02015 PF02082 Transcriptional regulator M1S50_02020 PF00175 Oxidoreductase NAD-binding domain M1S50_02020 PF00970 Oxidoreductase FAD-binding domain M1S50_02020 PF00042 Globin M1S50_02025 PF05872 Bacterial protein of unknown function (DUF853) M1S50_02030 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S50_02035 PF00117 Glutamine amidotransferase class-I M1S50_02040 PF00338 Ribosomal protein S10p/S20e M1S50_02045 PF00297 Ribosomal protein L3 M1S50_02050 PF00573 Ribosomal protein L4/L1 family M1S50_02055 PF00276 Ribosomal protein L23 M1S50_02060 PF03947 Ribosomal Proteins L2, C-terminal domain M1S50_02060 PF00181 Ribosomal Proteins L2, RNA binding domain M1S50_02065 PF00203 Ribosomal protein S19 M1S50_02070 PF00237 Ribosomal protein L22p/L17e M1S50_02080 PF00252 Ribosomal protein L16p/L10e M1S50_02085 PF00831 Ribosomal L29 protein M1S50_02090 PF00366 Ribosomal protein S17 M1S50_02095 PF00238 Ribosomal protein L14p/L23e M1S50_02100 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M1S50_02100 PF00467 KOW motif M1S50_02105 PF00281 Ribosomal protein L5 M1S50_02105 PF00673 ribosomal L5P family C-terminus M1S50_02110 PF00253 Ribosomal protein S14p/S29e M1S50_02115 PF00410 Ribosomal protein S8 M1S50_02120 PF00347 Ribosomal protein L6 M1S50_02125 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M1S50_02130 PF00333 Ribosomal protein S5, N-terminal domain M1S50_02130 PF03719 Ribosomal protein S5, C-terminal domain M1S50_02135 PF00327 Ribosomal protein L30p/L7e M1S50_02140 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M1S50_02145 PF00344 SecY translocase M1S50_02150 PF00444 Ribosomal protein L36 M1S50_02155 PF00416 Ribosomal protein S13/S18 M1S50_02160 PF00411 Ribosomal protein S11 M1S50_02165 PF00163 Ribosomal protein S4/S9 N-terminal domain M1S50_02165 PF01479 S4 domain M1S50_02170 PF01000 RNA polymerase Rpb3/RpoA insert domain M1S50_02170 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M1S50_02170 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M1S50_02175 PF01196 Ribosomal protein L17 M1S50_02180 PF00743 Flavin-binding monooxygenase-like M1S50_02185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_02185 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_02185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_02190 PF03937 Flavinator of succinate dehydrogenase M1S50_02220 PF09526 Probable metal-binding protein (DUF2387) M1S50_02225 PF01432 Peptidase family M3 M1S50_02230 PF08461 Ribonuclease R winged-helix domain M1S50_02230 PF08206 Ribonuclease B OB domain M1S50_02230 PF00575 S1 RNA binding domain M1S50_02230 PF17876 Cold shock domain M1S50_02230 PF00773 RNB domain M1S50_02275 PF01557 Fumarylacetoacetate (FAA) hydrolase family M1S50_02280 PF12833 Helix-turn-helix domain M1S50_02285 PF00892 EamA-like transporter family M1S50_02290 PF03631 Virulence factor BrkB M1S50_02295 PF03358 NADPH-dependent FMN reductase M1S50_02320 PF02130 Uncharacterized protein family UPF0054 M1S50_02325 PF02562 PhoH-like protein M1S50_02330 PF00919 Uncharacterized protein family UPF0004 M1S50_02330 PF04055 Radical SAM superfamily M1S50_02330 PF01938 TRAM domain M1S50_02335 PF01551 Peptidase family M23 M1S50_02335 PF01464 Transglycosylase SLT domain M1S50_02335 PF10145 Phage-related minor tail protein M1S50_02345 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1S50_02345 PF00056 lactate/malate dehydrogenase, NAD binding domain M1S50_02365 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M1S50_02370 PF01066 CDP-alcohol phosphatidyltransferase M1S50_02415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_02415 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_02415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_02420 PF17932 Tetracyclin repressor-like, C-terminal domain M1S50_02420 PF00440 Bacterial regulatory proteins, tetR family M1S50_02435 PF01039 Carboxyl transferase domain M1S50_02440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_02440 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_02440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_02450 PF00289 Biotin carboxylase, N-terminal domain M1S50_02450 PF00364 Biotin-requiring enzyme M1S50_02450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S50_02450 PF02785 Biotin carboxylase C-terminal domain M1S50_02460 PF04386 Stringent starvation protein B M1S50_02465 PF00043 Glutathione S-transferase, C-terminal domain M1S50_02465 PF13417 Glutathione S-transferase, N-terminal domain M1S50_02470 PF00380 Ribosomal protein S9/S16 M1S50_02475 PF00572 Ribosomal protein L13 M1S50_02480 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M1S50_02485 PF00398 Ribosomal RNA adenine dimethylase M1S50_02490 PF00149 Calcineurin-like phosphoesterase M1S50_02510 PF13167 GTP-binding GTPase N-terminal M1S50_02510 PF16360 GTP-binding GTPase Middle Region M1S50_02510 PF01926 50S ribosome-binding GTPase M1S50_02520 PF13091 PLD-like domain M1S50_02525 PF00149 Calcineurin-like phosphoesterase M1S50_02525 PF10518 TAT (twin-arginine translocation) pathway signal sequence M1S50_02530 PF00691 OmpA family M1S50_02530 PF01389 OmpA-like transmembrane domain M1S50_02535 PF17152 Periplasmic sensor domain M1S50_02535 PF00990 Diguanylate cyclase, GGDEF domain M1S50_02570 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_02570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S50_02580 PF00753 Metallo-beta-lactamase superfamily M1S50_02580 PF04273 Putative phosphatase (DUF442) M1S50_02585 PF00561 alpha/beta hydrolase fold M1S50_02590 PF00085 Thioredoxin M1S50_02595 PF03061 Thioesterase superfamily M1S50_02605 PF04461 Protein of unknown function (DUF520) M1S50_02615 PF01266 FAD dependent oxidoreductase M1S50_02615 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S50_02625 PF03795 YCII-related domain M1S50_02630 PF04279 Intracellular septation protein A M1S50_02635 PF02811 PHP domain M1S50_02640 PF01062 Bestrophin, RFP-TM, chloride channel M1S50_02645 PF04002 RadC-like JAB domain M1S50_02650 PF02441 Flavoprotein M1S50_02650 PF04127 DNA / pantothenate metabolism flavoprotein M1S50_02655 PF02355 Protein export membrane protein M1S50_02655 PF07549 SecD/SecF GG Motif M1S50_02660 PF07549 SecD/SecF GG Motif M1S50_02660 PF13721 SecD export protein N-terminal TM region M1S50_02660 PF02355 Protein export membrane protein M1S50_02665 PF02699 Preprotein translocase subunit M1S50_02670 PF01702 Queuine tRNA-ribosyltransferase M1S50_02685 PF02547 Queuosine biosynthesis protein M1S50_02715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_02715 PF00512 His Kinase A (phospho-acceptor) domain M1S50_02715 PF07689 KaiB domain M1S50_02720 PF08335 GlnD PII-uridylyltransferase M1S50_02720 PF03710 Glutamate-ammonia ligase adenylyltransferase M1S50_02725 PF01063 Amino-transferase class IV M1S50_02740 PF01522 Polysaccharide deacetylase M1S50_02745 PF00535 Glycosyl transferase family 2 M1S50_02750 PF00534 Glycosyl transferases group 1 M1S50_02750 PF13439 Glycosyltransferase Family 4 M1S50_02775 PF17102 Stealth protein CR3, conserved region 3 M1S50_02775 PF17101 Stealth protein CR1, conserved region 1 M1S50_02775 PF11380 Stealth protein CR2, conserved region 2 M1S50_02780 PF00152 tRNA synthetases class II (D, K and N) M1S50_02780 PF01336 OB-fold nucleic acid binding domain M1S50_02780 PF02938 GAD domain M1S50_02790 PF07715 TonB-dependent Receptor Plug Domain M1S50_02790 PF00593 TonB dependent receptor M1S50_02810 PF06146 Phosphate-starvation-inducible E M1S50_02815 PF00043 Glutathione S-transferase, C-terminal domain M1S50_02815 PF02798 Glutathione S-transferase, N-terminal domain M1S50_02820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_02820 PF03466 LysR substrate binding domain M1S50_02825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_02825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_02825 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S50_02825 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_02830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_02830 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_02830 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S50_02830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_02840 PF00672 HAMP domain M1S50_02840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_02840 PF00512 His Kinase A (phospho-acceptor) domain M1S50_02845 PF00072 Response regulator receiver domain M1S50_02845 PF00486 Transcriptional regulatory protein, C terminal M1S50_02850 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M1S50_02870 PF01923 Cobalamin adenosyltransferase M1S50_02875 PF00593 TonB dependent receptor M1S50_02875 PF07715 TonB-dependent Receptor Plug Domain M1S50_02880 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M1S50_02885 PF00291 Pyridoxal-phosphate dependent enzyme M1S50_02910 PF00290 Tryptophan synthase alpha chain M1S50_02915 PF01039 Carboxyl transferase domain M1S50_02920 PF08245 Mur ligase middle domain M1S50_02920 PF02875 Mur ligase family, glutamate ligase domain M1S50_02935 PF00753 Metallo-beta-lactamase superfamily M1S50_02940 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S50_02940 PF00578 AhpC/TSA family M1S50_02945 PF07517 SecA DEAD-like domain M1S50_02945 PF01043 SecA preprotein cross-linking domain M1S50_02945 PF07516 SecA Wing and Scaffold domain M1S50_02945 PF02810 SEC-C motif M1S50_02955 PF07690 Major Facilitator Superfamily M1S50_02955 PF00083 Sugar (and other) transporter M1S50_02960 PF03006 Haemolysin-III related M1S50_02995 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S50_02995 PF00378 Enoyl-CoA hydratase/isomerase M1S50_02995 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S50_03000 PF02803 Thiolase, C-terminal domain M1S50_03000 PF00108 Thiolase, N-terminal domain M1S50_03005 PF02311 AraC-like ligand binding domain M1S50_03005 PF12833 Helix-turn-helix domain M1S50_03010 PF02515 CoA-transferase family III M1S50_03015 PF04966 Carbohydrate-selective porin, OprB family M1S50_03020 PF01011 PQQ enzyme repeat M1S50_03025 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S50_03025 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S50_03035 PF00893 Small Multidrug Resistance protein M1S50_03045 PF02803 Thiolase, C-terminal domain M1S50_03045 PF00108 Thiolase, N-terminal domain M1S50_03065 PF01139 tRNA-splicing ligase RtcB M1S50_03070 PF00324 Amino acid permease M1S50_03075 PF05175 Methyltransferase small domain M1S50_03075 PF08468 Methyltransferase small domain N-terminal M1S50_03080 PF00860 Permease family M1S50_03085 PF00009 Elongation factor Tu GTP binding domain M1S50_03085 PF03144 Elongation factor Tu domain 2 M1S50_03085 PF00679 Elongation factor G C-terminus M1S50_03090 PF01741 Large-conductance mechanosensitive channel, MscL M1S50_03105 PF06827 Zinc finger found in FPG and IleRS M1S50_03105 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M1S50_03105 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M1S50_03110 PF02245 Methylpurine-DNA glycosylase (MPG) M1S50_03130 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S50_03145 PF13098 Thioredoxin-like domain M1S50_03145 PF10411 Disulfide bond isomerase protein N-terminus M1S50_03150 PF01571 Aminomethyltransferase folate-binding domain M1S50_03160 PF04343 Protein of unknown function, DUF488 M1S50_03165 PF03831 PhnA domain M1S50_03165 PF08274 PhnA Zinc-Ribbon M1S50_03170 PF07411 Domain of unknown function (DUF1508) M1S50_03175 PF04073 Aminoacyl-tRNA editing domain M1S50_03175 PF03129 Anticodon binding domain M1S50_03175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S50_03180 PF00873 AcrB/AcrD/AcrF family M1S50_03195 PF00072 Response regulator receiver domain M1S50_03200 PF00072 Response regulator receiver domain M1S50_03205 PF01584 CheW-like domain M1S50_03210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M1S50_03210 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M1S50_03215 PF01627 Hpt domain M1S50_03215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_03215 PF01584 CheW-like domain M1S50_03215 PF00072 Response regulator receiver domain M1S50_03225 PF07687 Peptidase dimerisation domain M1S50_03225 PF01546 Peptidase family M20/M25/M40 M1S50_03230 PF08085 Entericidin EcnA/B family M1S50_03240 PF04304 Protein of unknown function (DUF454) M1S50_03245 PF17969 L,D-transpeptidase C-terminal domain M1S50_03245 PF03734 L,D-transpeptidase catalytic domain M1S50_03285 PF00258 Flavodoxin M1S50_03285 PF00667 FAD binding domain M1S50_03285 PF00175 Oxidoreductase NAD-binding domain M1S50_03295 PF12805 FUSC-like inner membrane protein yccS M1S50_03300 PF07690 Major Facilitator Superfamily M1S50_03305 PF00881 Nitroreductase family M1S50_03320 PF01235 Sodium:alanine symporter family M1S50_03325 PF01734 Patatin-like phospholipase M1S50_03330 PF00291 Pyridoxal-phosphate dependent enzyme M1S50_03330 PF13291 ACT domain M1S50_03335 PF05992 SbmA/BacA-like family M1S50_03370 PF02934 GatB/GatE catalytic domain M1S50_03370 PF02637 GatB domain M1S50_03375 PF01425 Amidase M1S50_03380 PF02686 Glu-tRNAGln amidotransferase C subunit M1S50_03390 PF04085 rod shape-determining protein MreC M1S50_03395 PF04093 rod shape-determining protein MreD M1S50_03400 PF02545 Maf-like protein M1S50_03405 PF00575 S1 RNA binding domain M1S50_03405 PF10150 Ribonuclease E/G family M1S50_03415 PF06974 Protein of unknown function (DUF1298) M1S50_03415 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain M1S50_03420 PF01507 Phosphoadenosine phosphosulfate reductase family M1S50_03435 PF02525 Flavodoxin-like fold M1S50_03455 PF02673 Bacitracin resistance protein BacA M1S50_03460 PF06719 AraC-type transcriptional regulator N-terminus M1S50_03460 PF12833 Helix-turn-helix domain M1S50_03465 PF16197 Ketoacyl-synthetase C-terminal extension M1S50_03465 PF09277 Erythronolide synthase, docking M1S50_03465 PF08990 Erythronolide synthase docking M1S50_03465 PF00698 Acyl transferase domain M1S50_03465 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S50_03465 PF08240 Alcohol dehydrogenase GroES-like domain M1S50_03465 PF14765 Polyketide synthase dehydratase M1S50_03465 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S50_03465 PF00550 Phosphopantetheine attachment site M1S50_03465 PF08659 KR domain M1S50_03470 PF01965 DJ-1/PfpI family M1S50_03480 PF00324 Amino acid permease M1S50_03485 PF04303 PrpF protein M1S50_03490 PF00348 Polyprenyl synthetase M1S50_03495 PF04237 YjbR M1S50_03500 PF01145 SPFH domain / Band 7 family M1S50_03510 PF01734 Patatin-like phospholipase M1S50_03530 PF08019 Phosphoethanolamine transferase EptA/EptB M1S50_03530 PF00884 Sulfatase M1S50_03535 PF00072 Response regulator receiver domain M1S50_03535 PF00486 Transcriptional regulatory protein, C terminal M1S50_03540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_03540 PF00512 His Kinase A (phospho-acceptor) domain M1S50_03540 PF08521 Two-component sensor kinase N-terminal M1S50_03550 PF00909 Ammonium Transporter Family M1S50_03555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_03555 PF03466 LysR substrate binding domain M1S50_03575 PF10458 Valyl tRNA synthetase tRNA binding arm M1S50_03575 PF00133 tRNA synthetases class I (I, L, M and V) M1S50_03575 PF08264 Anticodon-binding domain of tRNA M1S50_03595 PF01906 Putative heavy-metal-binding M1S50_03600 PF01906 Putative heavy-metal-binding M1S50_03605 PF02321 Outer membrane efflux protein M1S50_03610 PF00873 AcrB/AcrD/AcrF family M1S50_03615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S50_03615 PF00529 HlyD membrane-fusion protein of T1SS M1S50_03620 PF01569 PAP2 superfamily M1S50_03630 PF00348 Polyprenyl synthetase M1S50_03640 PF00829 Ribosomal prokaryotic L21 protein M1S50_03645 PF01016 Ribosomal L27 protein M1S50_03650 PF03548 Outer membrane lipoprotein carrier protein LolA M1S50_03660 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S50_03660 PF02403 Seryl-tRNA synthetase N-terminal domain M1S50_03665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S50_03665 PF10414 Sirohaem synthase dimerisation region M1S50_03665 PF14824 Sirohaem biosynthesis protein central M1S50_03670 PF00588 SpoU rRNA Methylase family M1S50_03675 PF01638 HxlR-like helix-turn-helix M1S50_03680 PF03358 NADPH-dependent FMN reductase M1S50_03685 PF13520 Amino acid permease M1S50_03690 PF00465 Iron-containing alcohol dehydrogenase M1S50_03700 PF03099 Biotin/lipoate A/B protein ligase family M1S50_03705 PF04359 Protein of unknown function (DUF493) M1S50_03710 PF04545 Sigma-70, region 4 M1S50_03710 PF04539 Sigma-70 region 3 M1S50_03710 PF04542 Sigma-70 region 2 M1S50_03710 PF00140 Sigma-70 factor, region 1.2 M1S50_03710 PF04546 Sigma-70, non-essential region M1S50_03710 PF03979 Sigma-70 factor, region 1.1 M1S50_03730 PF17773 UPF0176 acylphosphatase like domain M1S50_03730 PF00581 Rhodanese-like domain M1S50_03740 PF00285 Citrate synthase, C-terminal domain M1S50_03745 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S50_03750 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S50_03755 PF02910 Fumarate reductase flavoprotein C-term M1S50_03755 PF00890 FAD binding domain M1S50_03760 PF13085 2Fe-2S iron-sulfur cluster binding domain M1S50_03775 PF00676 Dehydrogenase E1 component M1S50_03775 PF16870 2-oxoglutarate dehydrogenase C-terminal M1S50_03775 PF02779 Transketolase, pyrimidine binding domain M1S50_03775 PF16078 2-oxoglutarate dehydrogenase N-terminus M1S50_03780 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S50_03780 PF00364 Biotin-requiring enzyme M1S50_03780 PF02817 e3 binding domain M1S50_03785 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_03785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S50_03790 PF08442 ATP-grasp domain M1S50_03790 PF00549 CoA-ligase M1S50_03795 PF02629 CoA binding domain M1S50_03795 PF00549 CoA-ligase M1S50_03800 PF00579 tRNA synthetases class I (W and Y) M1S50_03805 PF05661 Protein of unknown function (DUF808) M1S50_03810 PF04228 Putative neutral zinc metallopeptidase M1S50_03815 PF00999 Sodium/hydrogen exchanger family M1S50_03830 PF09587 Bacterial capsule synthesis protein PGA_cap M1S50_03840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S50_03845 PF00582 Universal stress protein family M1S50_03850 PF00132 Bacterial transferase hexapeptide (six repeats) M1S50_03855 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S50_03855 PF03449 Transcription elongation factor, N-terminal M1S50_03860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S50_03860 PF02142 MGS-like domain M1S50_03860 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M1S50_03865 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M1S50_03865 PF00117 Glutamine amidotransferase class-I M1S50_03880 PF01985 CRS1 / YhbY (CRM) domain M1S50_03885 PF01728 FtsJ-like methyltransferase M1S50_03890 PF06480 FtsH Extracellular M1S50_03890 PF00004 ATPase family associated with various cellular activities (AAA) M1S50_03890 PF17862 AAA+ lid domain M1S50_03890 PF01434 Peptidase family M41 M1S50_03895 PF00809 Pterin binding enzyme M1S50_03915 PF16655 PhoD-like phosphatase, N-terminal domain M1S50_03915 PF09423 PhoD-like phosphatase M1S50_03930 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M1S50_03930 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M1S50_03945 PF00083 Sugar (and other) transporter M1S50_03950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1S50_03950 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1S50_03955 PF01266 FAD dependent oxidoreductase M1S50_03955 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M1S50_03960 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1S50_03960 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1S50_03965 PF00781 Diacylglycerol kinase catalytic domain M1S50_03970 PF00149 Calcineurin-like phosphoesterase M1S50_03980 PF00166 Chaperonin 10 Kd subunit M1S50_03985 PF00118 TCP-1/cpn60 chaperonin family M1S50_03990 PF01219 Prokaryotic diacylglycerol kinase M1S50_03995 PF00753 Metallo-beta-lactamase superfamily M1S50_04000 PF03009 Glycerophosphoryl diester phosphodiesterase family M1S50_04005 PF00873 AcrB/AcrD/AcrF family M1S50_04015 PF01435 Peptidase family M48 M1S50_04020 PF01464 Transglycosylase SLT domain M1S50_04025 PF01171 PP-loop family M1S50_04035 PF01464 Transglycosylase SLT domain M1S50_04035 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S50_04040 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S50_04040 PF03449 Transcription elongation factor, N-terminal M1S50_04055 PF13193 AMP-binding enzyme C-terminal domain M1S50_04055 PF00668 Condensation domain M1S50_04055 PF00550 Phosphopantetheine attachment site M1S50_04055 PF00975 Thioesterase domain M1S50_04055 PF00501 AMP-binding enzyme M1S50_04085 PF00881 Nitroreductase family M1S50_04100 PF02595 Glycerate kinase family M1S50_04105 PF00384 Molybdopterin oxidoreductase M1S50_04110 PF02634 FdhD/NarQ family M1S50_04115 PF06803 Protein of unknown function (DUF1232) M1S50_04120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S50_04120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S50_04120 PF11890 Domain of unknown function (DUF3410) M1S50_04125 PF00152 tRNA synthetases class II (D, K and N) M1S50_04135 PF18073 Rubredoxin metal binding domain M1S50_04140 PF00324 Amino acid permease M1S50_04150 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M1S50_04150 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M1S50_04155 PF01678 Diaminopimelate epimerase M1S50_04160 PF01810 LysE type translocator M1S50_04165 PF02899 Phage integrase, N-terminal SAM-like domain M1S50_04165 PF00589 Phage integrase family M1S50_04170 PF01012 Electron transfer flavoprotein domain M1S50_04175 PF01012 Electron transfer flavoprotein domain M1S50_04175 PF00766 Electron transfer flavoprotein FAD-binding domain M1S50_04180 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S50_04180 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S50_04195 PF00535 Glycosyl transferase family 2 M1S50_04215 PF13533 Biotin-lipoyl like M1S50_04225 PF00266 Aminotransferase class-V M1S50_04240 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M1S50_04250 PF02687 FtsX-like permease family M1S50_04250 PF12704 MacB-like periplasmic core domain M1S50_04255 PF00005 ABC transporter M1S50_04260 PF13567 Domain of unknown function (DUF4131) M1S50_04260 PF03772 Competence protein M1S50_04260 PF00753 Metallo-beta-lactamase superfamily M1S50_04270 PF06965 Na+/H+ antiporter 1 M1S50_04270 PF01343 Peptidase family S49 M1S50_04275 PF12697 Alpha/beta hydrolase family M1S50_04280 PF00551 Formyl transferase M1S50_04285 PF00586 AIR synthase related protein, N-terminal domain M1S50_04285 PF02769 AIR synthase related protein, C-terminal domain M1S50_04290 PF01594 AI-2E family transporter M1S50_04295 PF00308 Bacterial dnaA protein M1S50_04295 PF08299 Bacterial dnaA protein helix-turn-helix M1S50_04295 PF11638 DnaA N-terminal domain M1S50_04335 PF00588 SpoU rRNA Methylase family M1S50_04335 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S50_04340 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M1S50_04350 PF00691 OmpA family M1S50_04355 PF07676 WD40-like Beta Propeller Repeat M1S50_04355 PF04052 TolB amino-terminal domain M1S50_04365 PF02472 Biopolymer transport protein ExbD/TolR M1S50_04370 PF01618 MotA/TolQ/ExbB proton channel family M1S50_04375 PF03061 Thioesterase superfamily M1S50_04380 PF07687 Peptidase dimerisation domain M1S50_04380 PF01546 Peptidase family M20/M25/M40 M1S50_04385 PF17864 RuvB AAA lid domain M1S50_04385 PF05491 RuvB C-terminal winged helix domain M1S50_04385 PF05496 Holliday junction DNA helicase RuvB P-loop domain M1S50_04390 PF07499 RuvA, C-terminal domain M1S50_04390 PF01330 RuvA N terminal domain M1S50_04395 PF01966 HD domain M1S50_04400 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M1S50_04400 PF02769 AIR synthase related protein, C-terminal domain M1S50_04400 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M1S50_04405 PF07690 Major Facilitator Superfamily M1S50_04410 PF01784 NIF3 (NGG1p interacting factor 3) M1S50_04415 PF00378 Enoyl-CoA hydratase/isomerase M1S50_04420 PF01467 Cytidylyltransferase-like M1S50_04420 PF00293 NUDIX domain M1S50_04430 PF00578 AhpC/TSA family M1S50_04445 PF06508 Queuosine biosynthesis protein QueC M1S50_04455 PF00132 Bacterial transferase hexapeptide (six repeats) M1S50_04455 PF14602 Hexapeptide repeat of succinyl-transferase M1S50_04455 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M1S50_04465 PF03466 LysR substrate binding domain M1S50_04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_04470 PF12857 TOBE-like domain M1S50_04470 PF00005 ABC transporter M1S50_04475 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_04480 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_04495 PF01063 Amino-transferase class IV M1S50_04500 PF02618 YceG-like family M1S50_04505 PF02223 Thymidylate kinase M1S50_04515 PF02910 Fumarate reductase flavoprotein C-term M1S50_04515 PF00890 FAD binding domain M1S50_04520 PF13180 PDZ domain M1S50_04530 PF00679 Elongation factor G C-terminus M1S50_04530 PF03144 Elongation factor Tu domain 2 M1S50_04530 PF06421 GTP-binding protein LepA C-terminus M1S50_04530 PF00009 Elongation factor Tu GTP binding domain M1S50_04535 PF10502 Signal peptidase, peptidase S26 M1S50_04545 PF00035 Double-stranded RNA binding motif M1S50_04545 PF14622 Ribonuclease-III-like M1S50_04550 PF01926 50S ribosome-binding GTPase M1S50_04550 PF07650 KH domain M1S50_04560 PF02565 Recombination protein O C terminal M1S50_04560 PF11967 Recombination protein O N terminal M1S50_04565 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M1S50_04570 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M1S50_04575 PF00106 short chain dehydrogenase M1S50_04605 PF00155 Aminotransferase class I and II M1S50_04615 PF17151 Periplasmic sensor domain M1S50_04615 PF00990 Diguanylate cyclase, GGDEF domain M1S50_04625 PF00271 Helicase conserved C-terminal domain M1S50_04625 PF04851 Type III restriction enzyme, res subunit M1S50_04625 PF02151 UvrB/uvrC motif M1S50_04625 PF12344 Ultra-violet resistance protein B M1S50_04625 PF17757 UvrB interaction domain M1S50_04635 PF00892 EamA-like transporter family M1S50_04640 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S50_04640 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S50_04655 PF01018 GTP1/OBG M1S50_04655 PF01926 50S ribosome-binding GTPase M1S50_04660 PF00696 Amino acid kinase family M1S50_04660 PF01472 PUA domain M1S50_04670 PF07759 Protein of unknown function (DUF1615) M1S50_04675 PF01207 Dihydrouridine synthase (Dus) M1S50_04680 PF03060 Nitronate monooxygenase M1S50_04695 PF02350 UDP-N-acetylglucosamine 2-epimerase M1S50_04725 PF00875 DNA photolyase M1S50_04725 PF03441 FAD binding domain of DNA photolyase M1S50_04730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S50_04735 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_04740 PF07943 Penicillin-binding protein 5, C-terminal domain M1S50_04740 PF00768 D-alanyl-D-alanine carboxypeptidase M1S50_04750 PF03971 Monomeric isocitrate dehydrogenase M1S50_04755 PF00849 RNA pseudouridylate synthase M1S50_04760 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S50_04780 PF06779 Uncharacterised MFS-type transporter YbfB M1S50_04785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_04785 PF03466 LysR substrate binding domain M1S50_04790 PF00375 Sodium:dicarboxylate symporter family M1S50_04795 PF02567 Phenazine biosynthesis-like protein M1S50_04800 PF00675 Insulinase (Peptidase family M16) M1S50_04800 PF05193 Peptidase M16 inactive domain M1S50_04825 PF02581 Thiamine monophosphate synthase M1S50_04830 PF00202 Aminotransferase class-III M1S50_04840 PF00849 RNA pseudouridylate synthase M1S50_04845 PF00271 Helicase conserved C-terminal domain M1S50_04845 PF12137 RNA polymerase recycling family C-terminal M1S50_04845 PF00176 SNF2 family N-terminal domain M1S50_04845 PF18339 RapA N-terminal Tudor like domain 1 M1S50_04845 PF18337 RapA N-terminal Tudor like domain M1S50_04855 PF00440 Bacterial regulatory proteins, tetR family M1S50_04860 PF00970 Oxidoreductase FAD-binding domain M1S50_04860 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S50_04860 PF00175 Oxidoreductase NAD-binding domain M1S50_04865 PF00487 Fatty acid desaturase M1S50_04875 PF17754 MftR C-terminal domain M1S50_04875 PF00440 Bacterial regulatory proteins, tetR family M1S50_04885 PF00202 Aminotransferase class-III M1S50_04890 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S50_04895 PF00171 Aldehyde dehydrogenase family M1S50_04900 PF01037 Lrp/AsnC ligand binding domain M1S50_04905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S50_04905 PF00205 Thiamine pyrophosphate enzyme, central domain M1S50_04905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S50_04910 PF00324 Amino acid permease M1S50_04915 PF12849 PBP superfamily domain M1S50_04920 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_04925 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_04930 PF00005 ABC transporter M1S50_04935 PF08496 Peptidase family S49 N-terminal M1S50_04935 PF01343 Peptidase family S49 M1S50_04950 PF08328 Adenylosuccinate lyase C-terminal M1S50_04950 PF00206 Lyase M1S50_04955 PF04356 Protein of unknown function (DUF489) M1S50_04965 PF00293 NUDIX domain M1S50_04965 PF13344 Haloacid dehalogenase-like hydrolase M1S50_04970 PF00132 Bacterial transferase hexapeptide (six repeats) M1S50_04975 PF07943 Penicillin-binding protein 5, C-terminal domain M1S50_04975 PF00768 D-alanyl-D-alanine carboxypeptidase M1S50_04990 PF01975 Survival protein SurE M1S50_04995 PF01476 LysM domain M1S50_04995 PF01551 Peptidase family M23 M1S50_05000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_05000 PF03466 LysR substrate binding domain M1S50_05005 PF13654 AAA domain M1S50_05005 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S50_05010 PF07690 Major Facilitator Superfamily M1S50_05015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S50_05020 PF13593 SBF-like CPA transporter family (DUF4137) M1S50_05025 PF01197 Ribosomal protein L31 M1S50_05040 PF04055 Radical SAM superfamily M1S50_05045 PF01132 Elongation factor P (EF-P) OB domain M1S50_05045 PF08207 Elongation factor P (EF-P) KOW-like domain M1S50_05045 PF09285 Elongation factor P, C-terminal M1S50_05050 PF02554 Carbon starvation protein CstA M1S50_05050 PF13722 5TM C-terminal transporter carbon starvation CstA M1S50_05055 PF04328 Selenoprotein, putative M1S50_05090 PF06018 CodY GAF-like domain M1S50_05090 PF17853 GGDEF-like domain M1S50_05090 PF13556 PucR C-terminal helix-turn-helix domain M1S50_05105 PF00171 Aldehyde dehydrogenase family M1S50_05110 PF00324 Amino acid permease M1S50_05115 PF03466 LysR substrate binding domain M1S50_05115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_05120 PF02028 BCCT, betaine/carnitine/choline family transporter M1S50_05125 PF02028 BCCT, betaine/carnitine/choline family transporter M1S50_05130 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S50_05130 PF00355 Rieske [2Fe-2S] domain M1S50_05135 PF00171 Aldehyde dehydrogenase family M1S50_05145 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_05145 PF18113 Rubredoxin binding C-terminal domain M1S50_05150 PF01266 FAD dependent oxidoreductase M1S50_05150 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S50_05170 PF00892 EamA-like transporter family M1S50_05180 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M1S50_05185 PF00083 Sugar (and other) transporter M1S50_05190 PF13378 Enolase C-terminal domain-like M1S50_05190 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S50_05195 PF08659 KR domain M1S50_05195 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S50_05195 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S50_05195 PF16197 Ketoacyl-synthetase C-terminal extension M1S50_05195 PF00550 Phosphopantetheine attachment site M1S50_05195 PF08990 Erythronolide synthase docking M1S50_05195 PF08240 Alcohol dehydrogenase GroES-like domain M1S50_05195 PF00698 Acyl transferase domain M1S50_05195 PF09277 Erythronolide synthase, docking M1S50_05195 PF14765 Polyketide synthase dehydratase M1S50_05200 PF00440 Bacterial regulatory proteins, tetR family M1S50_05220 PF02678 Pirin M1S50_05220 PF17954 Quercetinase C-terminal cupin domain M1S50_05230 PF13309 HTH domain M1S50_05230 PF08348 YheO-like PAS domain M1S50_05240 PF00501 AMP-binding enzyme M1S50_05240 PF00550 Phosphopantetheine attachment site M1S50_05240 PF13193 AMP-binding enzyme C-terminal domain M1S50_05240 PF00668 Condensation domain M1S50_05245 PF13193 AMP-binding enzyme C-terminal domain M1S50_05245 PF00668 Condensation domain M1S50_05245 PF00550 Phosphopantetheine attachment site M1S50_05245 PF00975 Thioesterase domain M1S50_05245 PF00501 AMP-binding enzyme M1S50_05250 PF01032 FecCD transport family M1S50_05255 PF01032 FecCD transport family M1S50_05260 PF00005 ABC transporter M1S50_05265 PF01497 Periplasmic binding protein M1S50_05270 PF00593 TonB dependent receptor M1S50_05270 PF07715 TonB-dependent Receptor Plug Domain M1S50_05275 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S50_05280 PF00550 Phosphopantetheine attachment site M1S50_05280 PF00501 AMP-binding enzyme M1S50_05280 PF00668 Condensation domain M1S50_05285 PF13193 AMP-binding enzyme C-terminal domain M1S50_05285 PF00501 AMP-binding enzyme M1S50_05290 PF00857 Isochorismatase family M1S50_05290 PF00550 Phosphopantetheine attachment site M1S50_05295 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S50_05305 PF00005 ABC transporter M1S50_05310 PF00005 ABC transporter M1S50_05315 PF00975 Thioesterase domain M1S50_05325 PF00425 chorismate binding enzyme M1S50_05335 PF01208 Uroporphyrinogen decarboxylase (URO-D) M1S50_05340 PF05675 Protein of unknown function (DUF817) M1S50_05355 PF00144 Beta-lactamase M1S50_05365 PF01227 GTP cyclohydrolase I M1S50_05370 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S50_05370 PF01799 [2Fe-2S] binding domain M1S50_05375 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M1S50_05375 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M1S50_05390 PF00218 Indole-3-glycerol phosphate synthase M1S50_05395 PF02885 Glycosyl transferase family, helical bundle domain M1S50_05395 PF00591 Glycosyl transferase family, a/b domain M1S50_05400 PF00593 TonB dependent receptor M1S50_05400 PF07715 TonB-dependent Receptor Plug Domain M1S50_05405 PF01433 Peptidase family M1 domain M1S50_05405 PF11838 ERAP1-like C-terminal domain M1S50_05410 PF00117 Glutamine amidotransferase class-I M1S50_05420 PF00854 POT family M1S50_05425 PF00120 Glutamine synthetase, catalytic domain M1S50_05425 PF03951 Glutamine synthetase, beta-Grasp domain M1S50_05430 PF04345 Chorismate lyase M1S50_05435 PF01040 UbiA prenyltransferase family M1S50_05470 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M1S50_05470 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M1S50_05475 PF01784 NIF3 (NGG1p interacting factor 3) M1S50_05480 PF13180 PDZ domain M1S50_05485 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S50_05485 PF01743 Poly A polymerase head domain M1S50_05490 PF03949 Malic enzyme, NAD binding domain M1S50_05490 PF01515 Phosphate acetyl/butaryl transferase M1S50_05490 PF00390 Malic enzyme, N-terminal domain M1S50_05495 PF00563 EAL domain M1S50_05495 PF00990 Diguanylate cyclase, GGDEF domain M1S50_05495 PF03707 Bacterial signalling protein N terminal repeat M1S50_05500 PF04452 RNA methyltransferase M1S50_05505 PF02219 Methylenetetrahydrofolate reductase M1S50_05510 PF05221 S-adenosyl-L-homocysteine hydrolase M1S50_05510 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M1S50_05525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_05525 PF09317 Domain of unknown function (DUF1974) M1S50_05525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_05530 PF04055 Radical SAM superfamily M1S50_05535 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_05535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S50_05545 PF07690 Major Facilitator Superfamily M1S50_05555 PF00557 Metallopeptidase family M24 M1S50_05560 PF00318 Ribosomal protein S2 M1S50_05565 PF00889 Elongation factor TS M1S50_05575 PF12833 Helix-turn-helix domain M1S50_05595 PF03330 Lytic transglycolase M1S50_05595 PF05036 Sporulation related domain M1S50_05600 PF13406 Transglycosylase SLT domain M1S50_05605 PF01098 Cell cycle protein M1S50_05615 PF14489 QueF-like protein M1S50_05615 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M1S50_05620 PF01061 ABC-2 type transporter M1S50_05625 PF00005 ABC transporter M1S50_05655 PF00464 Serine hydroxymethyltransferase M1S50_05660 PF02321 Outer membrane efflux protein M1S50_05665 PF00873 AcrB/AcrD/AcrF family M1S50_05670 PF13533 Biotin-lipoyl like M1S50_05675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_05675 PF03466 LysR substrate binding domain M1S50_05680 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S50_05685 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_05690 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_05695 PF00005 ABC transporter M1S50_05700 PF00893 Small Multidrug Resistance protein M1S50_05705 PF00037 4Fe-4S binding domain M1S50_05710 PF01136 Peptidase family U32 M1S50_05710 PF16325 Peptidase family U32 C-terminal domain M1S50_05715 PF00155 Aminotransferase class I and II M1S50_05715 PF00392 Bacterial regulatory proteins, gntR family M1S50_05720 PF02567 Phenazine biosynthesis-like protein M1S50_05725 PF00970 Oxidoreductase FAD-binding domain M1S50_05725 PF00175 Oxidoreductase NAD-binding domain M1S50_05730 PF01980 tRNA-methyltransferase O M1S50_05730 PF18389 TrmO C-terminal domain M1S50_05740 PF00437 Type II/IV secretion system protein M1S50_05740 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S50_05750 PF00072 Response regulator receiver domain M1S50_05750 PF00486 Transcriptional regulatory protein, C terminal M1S50_05755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_05755 PF00512 His Kinase A (phospho-acceptor) domain M1S50_05755 PF08521 Two-component sensor kinase N-terminal M1S50_05765 PF00293 NUDIX domain M1S50_05780 PF01513 ATP-NAD kinase M1S50_05785 PF07023 Protein of unknown function (DUF1315) M1S50_05790 PF02885 Glycosyl transferase family, helical bundle domain M1S50_05790 PF00591 Glycosyl transferase family, a/b domain M1S50_05795 PF00375 Sodium:dicarboxylate symporter family M1S50_05800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_05800 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_05800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_05805 PF00756 Putative esterase M1S50_05810 PF01817 Chorismate mutase type II M1S50_05810 PF01842 ACT domain M1S50_05810 PF00800 Prephenate dehydratase M1S50_05815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S50_05825 PF01546 Peptidase family M20/M25/M40 M1S50_05825 PF07687 Peptidase dimerisation domain M1S50_05830 PF12706 Beta-lactamase superfamily domain M1S50_05840 PF03883 Peroxide stress protein YaaA M1S50_05850 PF05690 Thiazole biosynthesis protein ThiG M1S50_05860 PF04241 Protein of unknown function (DUF423) M1S50_05865 PF04545 Sigma-70, region 4 M1S50_05865 PF00140 Sigma-70 factor, region 1.2 M1S50_05865 PF04542 Sigma-70 region 2 M1S50_05880 PF00313 'Cold-shock' DNA-binding domain M1S50_05885 PF00270 DEAD/DEAH box helicase M1S50_05885 PF00271 Helicase conserved C-terminal domain M1S50_05895 PF00881 Nitroreductase family M1S50_05900 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M1S50_05900 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M1S50_05910 PF00589 Phage integrase family M1S50_06005 PF01555 DNA methylase M1S50_06235 PF01180 Dihydroorotate dehydrogenase M1S50_06240 PF02674 Colicin V production protein M1S50_06245 PF00156 Phosphoribosyl transferase domain M1S50_06260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S50_06260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S50_06265 PF01435 Peptidase family M48 M1S50_06270 PF09424 Yqey-like protein M1S50_06275 PF01165 Ribosomal protein S21 M1S50_06280 PF00814 Glycoprotease family M1S50_06300 PF00069 Protein kinase domain M1S50_06325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_06325 PF03466 LysR substrate binding domain M1S50_06330 PF00202 Aminotransferase class-III M1S50_06335 PF00171 Aldehyde dehydrogenase family M1S50_06340 PF00324 Amino acid permease M1S50_06370 PF04076 Bacterial OB fold (BOF) protein M1S50_06395 PF00561 alpha/beta hydrolase fold M1S50_06400 PF03616 Sodium/glutamate symporter M1S50_06410 PF07729 FCD domain M1S50_06410 PF00392 Bacterial regulatory proteins, gntR family M1S50_06460 PF00083 Sugar (and other) transporter M1S50_06460 PF08946 Osmosensory transporter coiled coil M1S50_06485 PF00155 Aminotransferase class I and II M1S50_06490 PF06826 Predicted Permease Membrane Region M1S50_06490 PF02080 TrkA-C domain M1S50_06500 PF04403 Paraquat-inducible protein A M1S50_06505 PF02470 MlaD protein M1S50_06515 PF01177 Asp/Glu/Hydantoin racemase M1S50_06520 PF00892 EamA-like transporter family M1S50_06525 PF07995 Glucose / Sorbosone dehydrogenase M1S50_06535 PF13610 DDE domain M1S50_06550 PF13610 DDE domain M1S50_06565 PF00132 Bacterial transferase hexapeptide (six repeats) M1S50_06575 PF00893 Small Multidrug Resistance protein M1S50_06580 PF00809 Pterin binding enzyme M1S50_06595 PF07091 Ribosomal RNA methyltransferase (FmrO) M1S50_06610 PF12848 ABC transporter M1S50_06610 PF00005 ABC transporter M1S50_06615 PF01636 Phosphotransferase enzyme family M1S50_06625 PF13817 IS66 C-terminal element M1S50_06625 PF13007 Transposase C of IS166 homeodomain M1S50_06625 PF13005 zinc-finger binding domain of transposase IS66 M1S50_06625 PF03050 Transposase IS66 family M1S50_06630 PF13610 DDE domain M1S50_06645 PF00375 Sodium:dicarboxylate symporter family M1S50_06655 PF16123 Hydroxyacylglutathione hydrolase C-terminus M1S50_06655 PF00753 Metallo-beta-lactamase superfamily M1S50_06660 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_06665 PF00005 ABC transporter M1S50_06665 PF09383 NIL domain M1S50_06670 PF03180 NLPA lipoprotein M1S50_06675 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M1S50_06675 PF02843 Phosphoribosylglycinamide synthetase, C domain M1S50_06675 PF02844 Phosphoribosylglycinamide synthetase, N domain M1S50_06680 PF01808 AICARFT/IMPCHase bienzyme M1S50_06680 PF02142 MGS-like domain M1S50_06685 PF02954 Bacterial regulatory protein, Fis family M1S50_06705 PF01134 Glucose inhibited division protein A M1S50_06705 PF13932 GidA associated domain M1S50_06715 PF14403 Circularly permuted ATP-grasp type 2 M1S50_06725 PF08379 Bacterial transglutaminase-like N-terminal region M1S50_06725 PF01841 Transglutaminase-like superfamily M1S50_06735 PF00842 Alanine racemase, C-terminal domain M1S50_06735 PF01168 Alanine racemase, N-terminal domain M1S50_06740 PF00772 DnaB-like helicase N terminal domain M1S50_06740 PF03796 DnaB-like helicase C terminal domain M1S50_06745 PF03948 Ribosomal protein L9, C-terminal domain M1S50_06745 PF01281 Ribosomal protein L9, N-terminal domain M1S50_06750 PF01084 Ribosomal protein S18 M1S50_06755 PF01250 Ribosomal protein S6 M1S50_06765 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M1S50_06770 PF00510 Cytochrome c oxidase subunit III M1S50_06775 PF00115 Cytochrome C and Quinol oxidase polypeptide I M1S50_06780 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M1S50_06780 PF06481 COX Aromatic Rich Motif M1S50_06790 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M1S50_06790 PF00391 PEP-utilising enzyme, mobile domain M1S50_06790 PF02896 PEP-utilising enzyme, TIM barrel domain M1S50_06795 PF03618 Kinase/pyrophosphorylase M1S50_06805 PF14883 Hypothetical glycosyl hydrolase family 13 M1S50_06805 PF01522 Polysaccharide deacetylase M1S50_06810 PF00535 Glycosyl transferase family 2 M1S50_06815 PF13994 PgaD-like protein M1S50_06825 PF00296 Luciferase-like monooxygenase M1S50_06840 PF03466 LysR substrate binding domain M1S50_06840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_06850 PF00472 RF-1 domain M1S50_06850 PF03462 PCRF domain M1S50_06855 PF13847 Methyltransferase domain M1S50_06855 PF17827 PrmC N-terminal domain M1S50_06860 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_06865 PF09084 NMT1/THI5 like M1S50_06870 PF12833 Helix-turn-helix domain M1S50_06875 PF00106 short chain dehydrogenase M1S50_06880 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_06880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_06880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_06885 PF13193 AMP-binding enzyme C-terminal domain M1S50_06885 PF00501 AMP-binding enzyme M1S50_06890 PF01613 Flavin reductase like domain M1S50_06895 PF00899 ThiF family M1S50_06900 PF03109 ABC1 family M1S50_06915 PF03814 Potassium-transporting ATPase A subunit M1S50_06925 PF02669 K+-transporting ATPase, c chain M1S50_06930 PF13493 Domain of unknown function (DUF4118) M1S50_06930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_06930 PF00512 His Kinase A (phospho-acceptor) domain M1S50_06930 PF02702 Osmosensitive K+ channel His kinase sensor domain M1S50_06935 PF00072 Response regulator receiver domain M1S50_06935 PF00486 Transcriptional regulatory protein, C terminal M1S50_06940 PF00120 Glutamine synthetase, catalytic domain M1S50_06950 PF03232 Ubiquinone biosynthesis protein COQ7 M1S50_06955 PF07690 Major Facilitator Superfamily M1S50_06960 PF07244 Surface antigen variable number repeat M1S50_06960 PF17243 POTRA domain TamA domain 1 M1S50_06960 PF01103 Surface antigen M1S50_06975 PF00330 Aconitase family (aconitate hydratase) M1S50_06975 PF06434 Aconitate hydratase 2 N-terminus M1S50_06975 PF11791 Aconitate B N-terminal domain M1S50_06985 PF00027 Cyclic nucleotide-binding domain M1S50_06985 PF00520 Ion transport protein M1S50_06990 PF07690 Major Facilitator Superfamily M1S50_07005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_07005 PF03466 LysR substrate binding domain M1S50_07010 PF04284 Protein of unknown function (DUF441) M1S50_07020 PF01479 S4 domain M1S50_07020 PF00849 RNA pseudouridylate synthase M1S50_07035 PF00849 RNA pseudouridylate synthase M1S50_07035 PF01479 S4 domain M1S50_07040 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M1S50_07045 PF01119 DNA mismatch repair protein, C-terminal domain M1S50_07045 PF08676 MutL C terminal dimerisation domain M1S50_07055 PF17209 Hfq protein M1S50_07065 PF00881 Nitroreductase family M1S50_07075 PF00149 Calcineurin-like phosphoesterase M1S50_07080 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S50_07085 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M1S50_07085 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S50_07090 PF02540 NAD synthase M1S50_07090 PF00958 GMP synthase C terminal domain M1S50_07090 PF00117 Glutamine amidotransferase class-I M1S50_07095 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M1S50_07100 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M1S50_07105 PF13520 Amino acid permease M1S50_07110 PF00171 Aldehyde dehydrogenase family M1S50_07125 PF00465 Iron-containing alcohol dehydrogenase M1S50_07130 PF05970 PIF1-like helicase M1S50_07130 PF14493 Helix-turn-helix domain M1S50_07140 PF06445 GyrI-like small molecule binding domain M1S50_07145 PF02110 Hydroxyethylthiazole kinase family M1S50_07160 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M1S50_07160 PF11940 Domain of unknown function (DUF3458) Ig-like fold M1S50_07160 PF01433 Peptidase family M1 domain M1S50_07170 PF00106 short chain dehydrogenase M1S50_07180 PF01817 Chorismate mutase type II M1S50_07185 PF01037 Lrp/AsnC ligand binding domain M1S50_07200 PF00440 Bacterial regulatory proteins, tetR family M1S50_07205 PF07715 TonB-dependent Receptor Plug Domain M1S50_07205 PF00593 TonB dependent receptor M1S50_07210 PF00924 Mechanosensitive ion channel M1S50_07245 PF07715 TonB-dependent Receptor Plug Domain M1S50_07245 PF00593 TonB dependent receptor M1S50_07265 PF00005 ABC transporter M1S50_07265 PF12848 ABC transporter M1S50_07270 PF00582 Universal stress protein family M1S50_07295 PF00689 Cation transporting ATPase, C-terminus M1S50_07295 PF00690 Cation transporter/ATPase, N-terminus M1S50_07300 PF02308 MgtC family M1S50_07305 PF03594 Benzoate membrane transport protein M1S50_07310 PF01037 Lrp/AsnC ligand binding domain M1S50_07315 PF01810 LysE type translocator M1S50_07320 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1S50_07325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_07325 PF03466 LysR substrate binding domain M1S50_07335 PF00108 Thiolase, N-terminal domain M1S50_07335 PF02803 Thiolase, C-terminal domain M1S50_07345 PF01575 MaoC like domain M1S50_07350 PF00144 Beta-lactamase M1S50_07360 PF07690 Major Facilitator Superfamily M1S50_07365 PF12170 DNA polymerase III tau subunit V interacting with alpha M1S50_07365 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M1S50_07365 PF12169 DNA polymerase III subunits gamma and tau domain III M1S50_07370 PF04185 Phosphoesterase family M1S50_07370 PF05506 Domain of unknown function (DUF756) M1S50_07375 PF03061 Thioesterase superfamily M1S50_07380 PF00465 Iron-containing alcohol dehydrogenase M1S50_07390 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S50_07395 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M1S50_07395 PF01565 FAD binding domain M1S50_07410 PF01645 Conserved region in glutamate synthase M1S50_07520 PF01555 DNA methylase M1S50_07690 PF08525 Opacity-associated protein A N-terminal motif M1S50_07690 PF01476 LysM domain M1S50_07690 PF01551 Peptidase family M23 M1S50_07785 PF12832 MFS_1 like family M1S50_07795 PF00289 Biotin carboxylase, N-terminal domain M1S50_07795 PF02785 Biotin carboxylase C-terminal domain M1S50_07795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S50_07800 PF00364 Biotin-requiring enzyme M1S50_07805 PF01220 Dehydroquinase class II M1S50_07810 PF11799 impB/mucB/samB family C-terminal domain M1S50_07810 PF00817 impB/mucB/samB family M1S50_07810 PF13438 Domain of unknown function (DUF4113) M1S50_07820 PF00005 ABC transporter M1S50_07825 PF00486 Transcriptional regulatory protein, C terminal M1S50_07825 PF00072 Response regulator receiver domain M1S50_07835 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S50_07835 PF13806 Rieske-like [2Fe-2S] domain M1S50_07835 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_07835 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S50_07835 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S50_07835 PF04324 BFD-like [2Fe-2S] binding domain M1S50_07840 PF04324 BFD-like [2Fe-2S] binding domain M1S50_07840 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S50_07840 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_07840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S50_07840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S50_07845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S50_07845 PF00384 Molybdopterin oxidoreductase M1S50_07845 PF01568 Molydopterin dinucleotide binding domain M1S50_07845 PF04324 BFD-like [2Fe-2S] binding domain M1S50_07850 PF12804 MobA-like NTP transferase domain M1S50_07855 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S50_07855 PF00384 Molybdopterin oxidoreductase M1S50_07855 PF01568 Molydopterin dinucleotide binding domain M1S50_07860 PF04055 Radical SAM superfamily M1S50_07860 PF06463 Molybdenum Cofactor Synthesis C M1S50_07870 PF02391 MoaE protein M1S50_07875 PF00994 Probable molybdopterin binding domain M1S50_07875 PF01967 MoaC family M1S50_07880 PF00994 Probable molybdopterin binding domain M1S50_07880 PF03454 MoeA C-terminal region (domain IV) M1S50_07880 PF03453 MoeA N-terminal region (domain I and II) M1S50_07885 PF01638 HxlR-like helix-turn-helix M1S50_07890 PF00155 Aminotransferase class I and II M1S50_07890 PF00392 Bacterial regulatory proteins, gntR family M1S50_07895 PF00892 EamA-like transporter family M1S50_07915 PF02635 DsrE/DsrF-like family M1S50_07920 PF16363 GDP-mannose 4,6 dehydratase M1S50_07925 PF10415 Fumarase C C-terminus M1S50_07925 PF00206 Lyase M1S50_07945 PF01266 FAD dependent oxidoreductase M1S50_07955 PF02542 YgbB family M1S50_07965 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S50_07965 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S50_07985 PF00158 Sigma-54 interaction domain M1S50_07985 PF00072 Response regulator receiver domain M1S50_07985 PF02954 Bacterial regulatory protein, Fis family M1S50_07990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_07990 PF00989 PAS fold M1S50_07990 PF00512 His Kinase A (phospho-acceptor) domain M1S50_07995 PF18693 TRAM domain M1S50_07995 PF00919 Uncharacterized protein family UPF0004 M1S50_07995 PF04055 Radical SAM superfamily M1S50_08000 PF00696 Amino acid kinase family M1S50_08005 PF01765 Ribosome recycling factor M1S50_08010 PF01255 Putative undecaprenyl diphosphate synthase M1S50_08020 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M1S50_08020 PF13288 DXP reductoisomerase C-terminal domain M1S50_08020 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M1S50_08025 PF13180 PDZ domain M1S50_08025 PF17820 PDZ domain M1S50_08025 PF02163 Peptidase family M50 M1S50_08030 PF01103 Surface antigen M1S50_08030 PF07244 Surface antigen variable number repeat M1S50_08040 PF00132 Bacterial transferase hexapeptide (six repeats) M1S50_08040 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M1S50_08045 PF07977 FabA-like domain M1S50_08050 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M1S50_08050 PF00132 Bacterial transferase hexapeptide (six repeats) M1S50_08065 PF02631 RecX family M1S50_08070 PF00154 recA bacterial DNA recombination protein M1S50_08075 PF01479 S4 domain M1S50_08080 PF13419 Haloacid dehalogenase-like hydrolase M1S50_08105 PF01037 Lrp/AsnC ligand binding domain M1S50_08110 PF00266 Aminotransferase class-V M1S50_08115 PF00324 Amino acid permease M1S50_08130 PF00082 Subtilase family M1S50_08130 PF05922 Peptidase inhibitor I9 M1S50_08135 PF01740 STAS domain M1S50_08135 PF00916 Sulfate permease family M1S50_08140 PF02586 SOS response associated peptidase (SRAP) M1S50_08145 PF07995 Glucose / Sorbosone dehydrogenase M1S50_08155 PF03707 Bacterial signalling protein N terminal repeat M1S50_08155 PF00563 EAL domain M1S50_08155 PF00990 Diguanylate cyclase, GGDEF domain M1S50_08175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M1S50_08175 PF02378 Phosphotransferase system, EIIC M1S50_08180 PF00294 pfkB family carbohydrate kinase M1S50_08185 PF00391 PEP-utilising enzyme, mobile domain M1S50_08185 PF05524 PEP-utilising enzyme, N-terminal M1S50_08185 PF02896 PEP-utilising enzyme, TIM barrel domain M1S50_08185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M1S50_08185 PF00381 PTS HPr component phosphorylation site M1S50_08210 PF05525 Branched-chain amino acid transport protein M1S50_08215 PF00557 Metallopeptidase family M24 M1S50_08220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_08220 PF03466 LysR substrate binding domain M1S50_08230 PF00462 Glutaredoxin M1S50_08235 PF00202 Aminotransferase class-III M1S50_08240 PF00478 IMP dehydrogenase / GMP reductase domain M1S50_08240 PF00571 CBS domain M1S50_08265 PF00448 SRP54-type protein, GTPase domain M1S50_08265 PF02881 SRP54-type protein, helical bundle domain M1S50_08275 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M1S50_08290 PF08173 Membrane bound YbgT-like protein M1S50_08295 PF02322 Cytochrome bd terminal oxidase subunit II M1S50_08300 PF01654 Cytochrome bd terminal oxidase subunit I M1S50_08310 PF07290 Protein of unknown function (DUF1449) M1S50_08320 PF00294 pfkB family carbohydrate kinase M1S50_08325 PF00593 TonB dependent receptor M1S50_08325 PF07715 TonB-dependent Receptor Plug Domain M1S50_08330 PF05193 Peptidase M16 inactive domain M1S50_08330 PF08367 Peptidase M16C associated M1S50_08330 PF00675 Insulinase (Peptidase family M16) M1S50_08335 PF02253 Phospholipase A1 M1S50_08340 PF02386 Cation transport protein M1S50_08345 PF02254 TrkA-N domain M1S50_08345 PF02080 TrkA-C domain M1S50_08350 PF00585 C-terminal regulatory domain of Threonine dehydratase M1S50_08350 PF00291 Pyridoxal-phosphate dependent enzyme M1S50_08355 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M1S50_08370 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S50_08370 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S50_08380 PF02617 ATP-dependent Clp protease adaptor protein ClpS M1S50_08385 PF07724 AAA domain (Cdc48 subfamily) M1S50_08385 PF00004 ATPase family associated with various cellular activities (AAA) M1S50_08385 PF10431 C-terminal, D2-small domain, of ClpB protein M1S50_08385 PF02861 Clp amino terminal domain, pathogenicity island component M1S50_08385 PF17871 AAA lid domain M1S50_08390 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M1S50_08395 PF00793 DAHP synthetase I family M1S50_08410 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_08410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S50_08440 PF00117 Glutamine amidotransferase class-I M1S50_08440 PF06418 CTP synthase N-terminus M1S50_08445 PF00793 DAHP synthetase I family M1S50_08450 PF00113 Enolase, C-terminal TIM barrel domain M1S50_08450 PF03952 Enolase, N-terminal domain M1S50_08455 PF04239 Protein of unknown function (DUF421) M1S50_08460 PF04977 Septum formation initiator M1S50_08465 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M1S50_08470 PF01144 Coenzyme A transferase M1S50_08475 PF01144 Coenzyme A transferase M1S50_08480 PF00108 Thiolase, N-terminal domain M1S50_08480 PF02803 Thiolase, C-terminal domain M1S50_08485 PF00206 Lyase M1S50_08485 PF10397 Adenylosuccinate lyase C-terminus M1S50_08490 PF00561 alpha/beta hydrolase fold M1S50_08495 PF07690 Major Facilitator Superfamily M1S50_08500 PF02627 Carboxymuconolactone decarboxylase family M1S50_08505 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M1S50_08505 PF00775 Dioxygenase M1S50_08510 PF00775 Dioxygenase M1S50_08515 PF01487 Type I 3-dehydroquinase M1S50_08520 PF05048 Periplasmic copper-binding protein (NosD) M1S50_08525 PF04966 Carbohydrate-selective porin, OprB family M1S50_08530 PF01011 PQQ enzyme repeat M1S50_08530 PF13360 PQQ-like domain M1S50_08540 PF04143 Sulphur transport M1S50_08550 PF00753 Metallo-beta-lactamase superfamily M1S50_08555 PF09339 IclR helix-turn-helix domain M1S50_08555 PF01614 Bacterial transcriptional regulator M1S50_08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_08560 PF03466 LysR substrate binding domain M1S50_08565 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_08565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_08565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_08580 PF00106 short chain dehydrogenase M1S50_08590 PF07690 Major Facilitator Superfamily M1S50_08600 PF01425 Amidase M1S50_08605 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S50_08620 PF00355 Rieske [2Fe-2S] domain M1S50_08620 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S50_08635 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S50_08635 PF00175 Oxidoreductase NAD-binding domain M1S50_08640 PF01613 Flavin reductase like domain M1S50_08645 PF12833 Helix-turn-helix domain M1S50_08645 PF02311 AraC-like ligand binding domain M1S50_08650 PF02728 Copper amine oxidase, N3 domain M1S50_08650 PF01179 Copper amine oxidase, enzyme domain M1S50_08650 PF07833 Copper amine oxidase N-terminal domain M1S50_08650 PF02727 Copper amine oxidase, N2 domain M1S50_08660 PF00171 Aldehyde dehydrogenase family M1S50_08665 PF01804 Penicillin amidase M1S50_08670 PF12146 Serine aminopeptidase, S33 M1S50_08675 PF02803 Thiolase, C-terminal domain M1S50_08675 PF00108 Thiolase, N-terminal domain M1S50_08680 PF01144 Coenzyme A transferase M1S50_08685 PF01144 Coenzyme A transferase M1S50_08690 PF04444 Catechol dioxygenase N terminus M1S50_08690 PF00775 Dioxygenase M1S50_08695 PF02426 Muconolactone delta-isomerase M1S50_08700 PF13378 Enolase C-terminal domain-like M1S50_08700 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S50_08705 PF03466 LysR substrate binding domain M1S50_08705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_08715 PF00392 Bacterial regulatory proteins, gntR family M1S50_08715 PF07729 FCD domain M1S50_08720 PF00920 Dehydratase family M1S50_08725 PF07690 Major Facilitator Superfamily M1S50_08735 PF00171 Aldehyde dehydrogenase family M1S50_08755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_08755 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_08755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_08765 PF02954 Bacterial regulatory protein, Fis family M1S50_08765 PF06506 Propionate catabolism activator M1S50_08765 PF00158 Sigma-54 interaction domain M1S50_08770 PF13193 AMP-binding enzyme C-terminal domain M1S50_08770 PF00501 AMP-binding enzyme M1S50_08775 PF04341 Protein of unknown function, DUF485 M1S50_08780 PF00474 Sodium:solute symporter family M1S50_08785 PF08240 Alcohol dehydrogenase GroES-like domain M1S50_08785 PF00107 Zinc-binding dehydrogenase M1S50_08790 PF00171 Aldehyde dehydrogenase family M1S50_08800 PF00561 alpha/beta hydrolase fold M1S50_08805 PF00199 Catalase M1S50_08805 PF06628 Catalase-related immune-responsive M1S50_08820 PF07859 alpha/beta hydrolase fold M1S50_08825 PF01047 MarR family M1S50_08830 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_08830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S50_08835 PF00106 short chain dehydrogenase M1S50_08840 PF01872 RibD C-terminal domain M1S50_08845 PF00376 MerR family regulatory protein M1S50_08845 PF09278 MerR, DNA binding M1S50_08855 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_08865 PF12706 Beta-lactamase superfamily domain M1S50_08870 PF08359 YsiA-like protein, C-terminal region M1S50_08870 PF00440 Bacterial regulatory proteins, tetR family M1S50_08880 PF00857 Isochorismatase family M1S50_08885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_08885 PF03466 LysR substrate binding domain M1S50_08890 PF07995 Glucose / Sorbosone dehydrogenase M1S50_08895 PF02254 TrkA-N domain M1S50_08895 PF00999 Sodium/hydrogen exchanger family M1S50_08905 PF07687 Peptidase dimerisation domain M1S50_08905 PF01546 Peptidase family M20/M25/M40 M1S50_08915 PF08479 POTRA domain, ShlB-type M1S50_08915 PF17287 POTRA domain M1S50_08915 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M1S50_08920 PF13018 Extended Signal Peptide of Type V secretion system M1S50_08920 PF13332 Hemagglutinin repeat M1S50_08920 PF04829 Pre-toxin domain with VENN motif M1S50_08920 PF05860 haemagglutination activity domain M1S50_08935 PF07690 Major Facilitator Superfamily M1S50_08940 PF04909 Amidohydrolase M1S50_08950 PF00392 Bacterial regulatory proteins, gntR family M1S50_08950 PF07702 UTRA domain M1S50_08955 PF08450 SMP-30/Gluconolactonase/LRE-like region M1S50_08965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_08965 PF03466 LysR substrate binding domain M1S50_08985 PF07690 Major Facilitator Superfamily M1S50_08990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S50_08990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S50_08990 PF01842 ACT domain M1S50_08995 PF03737 Aldolase/RraA M1S50_09025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S50_09025 PF00529 HlyD membrane-fusion protein of T1SS M1S50_09040 PF00171 Aldehyde dehydrogenase family M1S50_09045 PF00920 Dehydratase family M1S50_09055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_09055 PF03466 LysR substrate binding domain M1S50_09060 PF01370 NAD dependent epimerase/dehydratase family M1S50_09065 PF07690 Major Facilitator Superfamily M1S50_09070 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S50_09070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S50_09075 PF06719 AraC-type transcriptional regulator N-terminus M1S50_09075 PF12833 Helix-turn-helix domain M1S50_09090 PF00107 Zinc-binding dehydrogenase M1S50_09090 PF08240 Alcohol dehydrogenase GroES-like domain M1S50_09100 PF01032 FecCD transport family M1S50_09105 PF00005 ABC transporter M1S50_09125 PF14572 Phosphoribosyl synthetase-associated domain M1S50_09125 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S50_09130 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S50_09205 PF00196 Bacterial regulatory proteins, luxR family M1S50_09210 PF01425 Amidase M1S50_09215 PF13533 Biotin-lipoyl like M1S50_09220 PF07690 Major Facilitator Superfamily M1S50_09245 PF01975 Survival protein SurE M1S50_09255 PF13291 ACT domain M1S50_09255 PF04607 Region found in RelA / SpoT proteins M1S50_09255 PF02824 TGS domain M1S50_09305 PF12146 Serine aminopeptidase, S33 M1S50_09310 PF12833 Helix-turn-helix domain M1S50_09310 PF02311 AraC-like ligand binding domain M1S50_09320 PF16527 Two-component sensor protein CpxA, periplasmic domain M1S50_09320 PF00672 HAMP domain M1S50_09320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_09320 PF00512 His Kinase A (phospho-acceptor) domain M1S50_09340 PF00529 HlyD membrane-fusion protein of T1SS M1S50_09340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S50_09345 PF00873 AcrB/AcrD/AcrF family M1S50_09350 PF02321 Outer membrane efflux protein M1S50_09355 PF12146 Serine aminopeptidase, S33 M1S50_09360 PF00743 Flavin-binding monooxygenase-like M1S50_09365 PF01593 Flavin containing amine oxidoreductase M1S50_09380 PF01266 FAD dependent oxidoreductase M1S50_09400 PF16970 Type-1 fimbrial protein, A M1S50_09410 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S50_09410 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S50_09415 PF13953 PapC C-terminal domain M1S50_09415 PF13954 PapC N-terminal domain M1S50_09415 PF00577 Outer membrane usher protein M1S50_09420 PF00419 Fimbrial protein M1S50_09430 PF00107 Zinc-binding dehydrogenase M1S50_09430 PF08240 Alcohol dehydrogenase GroES-like domain M1S50_09440 PF00199 Catalase M1S50_09455 PF13091 PLD-like domain M1S50_09470 PF01244 Membrane dipeptidase (Peptidase family M19) M1S50_09475 PF04055 Radical SAM superfamily M1S50_09475 PF13186 Iron-sulfur cluster-binding domain M1S50_09480 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M1S50_09485 PF03070 TENA/THI-4/PQQC family M1S50_09490 PF12706 Beta-lactamase superfamily domain M1S50_09495 PF08042 PqqA family M1S50_09500 PF02503 Polyphosphate kinase middle domain M1S50_09500 PF13090 Polyphosphate kinase C-terminal domain 2 M1S50_09500 PF17941 Polyphosphate kinase C-terminal domain 1 M1S50_09500 PF13089 Polyphosphate kinase N-terminal domain M1S50_09505 PF00149 Calcineurin-like phosphoesterase M1S50_09515 PF00857 Isochorismatase family M1S50_09515 PF00550 Phosphopantetheine attachment site M1S50_09520 PF00106 short chain dehydrogenase M1S50_09530 PF03459 TOBE domain M1S50_09530 PF00005 ABC transporter M1S50_09535 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_09545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_09545 PF03459 TOBE domain M1S50_09550 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S50_09550 PF00355 Rieske [2Fe-2S] domain M1S50_09555 PF00866 Ring hydroxylating beta subunit M1S50_09560 PF00175 Oxidoreductase NAD-binding domain M1S50_09560 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S50_09560 PF00970 Oxidoreductase FAD-binding domain M1S50_09565 PF12833 Helix-turn-helix domain M1S50_09565 PF14525 AraC-binding-like domain M1S50_09575 PF01613 Flavin reductase like domain M1S50_09590 PF01738 Dienelactone hydrolase family M1S50_09595 PF07690 Major Facilitator Superfamily M1S50_09600 PF12833 Helix-turn-helix domain M1S50_09600 PF06719 AraC-type transcriptional regulator N-terminus M1S50_09625 PF03466 LysR substrate binding domain M1S50_09625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_09630 PF01144 Coenzyme A transferase M1S50_09635 PF01144 Coenzyme A transferase M1S50_09640 PF02667 Short chain fatty acid transporter M1S50_09645 PF02803 Thiolase, C-terminal domain M1S50_09645 PF00108 Thiolase, N-terminal domain M1S50_09650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_09650 PF03466 LysR substrate binding domain M1S50_09655 PF03466 LysR substrate binding domain M1S50_09655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_09670 PF00206 Lyase M1S50_09670 PF10415 Fumarase C C-terminus M1S50_09675 PF00593 TonB dependent receptor M1S50_09675 PF07715 TonB-dependent Receptor Plug Domain M1S50_09680 PF00083 Sugar (and other) transporter M1S50_09695 PF00005 ABC transporter M1S50_09700 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_09705 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S50_09720 PF00392 Bacterial regulatory proteins, gntR family M1S50_09720 PF07702 UTRA domain M1S50_09730 PF02525 Flavodoxin-like fold M1S50_09735 PF01638 HxlR-like helix-turn-helix M1S50_09740 PF06445 GyrI-like small molecule binding domain M1S50_09740 PF12833 Helix-turn-helix domain M1S50_09755 PF01925 Sulfite exporter TauE/SafE M1S50_09770 PF00753 Metallo-beta-lactamase superfamily M1S50_09770 PF04273 Putative phosphatase (DUF442) M1S50_09775 PF00158 Sigma-54 interaction domain M1S50_09775 PF02954 Bacterial regulatory protein, Fis family M1S50_09775 PF00072 Response regulator receiver domain M1S50_09780 PF01062 Bestrophin, RFP-TM, chloride channel M1S50_09785 PF00107 Zinc-binding dehydrogenase M1S50_09785 PF08240 Alcohol dehydrogenase GroES-like domain M1S50_09790 PF00106 short chain dehydrogenase M1S50_09795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S50_09795 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_09800 PF00364 Biotin-requiring enzyme M1S50_09800 PF02817 e3 binding domain M1S50_09800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S50_09805 PF02779 Transketolase, pyrimidine binding domain M1S50_09805 PF02780 Transketolase, C-terminal domain M1S50_09810 PF00676 Dehydrogenase E1 component M1S50_09815 PF04055 Radical SAM superfamily M1S50_09830 PF00990 Diguanylate cyclase, GGDEF domain M1S50_09830 PF08448 PAS fold M1S50_09835 PF01264 Chorismate synthase M1S50_09840 PF05175 Methyltransferase small domain M1S50_09845 PF00291 Pyridoxal-phosphate dependent enzyme M1S50_09855 PF01434 Peptidase family M41 M1S50_09855 PF00004 ATPase family associated with various cellular activities (AAA) M1S50_09855 PF17862 AAA+ lid domain M1S50_09865 PF05166 YcgL domain M1S50_09885 PF00570 HRDC domain M1S50_09885 PF01612 3'-5' exonuclease M1S50_09890 PF02132 RecR protein M1S50_09890 PF13662 Toprim domain M1S50_09895 PF02575 YbaB/EbfC DNA-binding family M1S50_09905 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S50_09910 PF00561 alpha/beta hydrolase fold M1S50_09915 PF08241 Methyltransferase domain M1S50_09945 PF01230 HIT domain M1S50_09980 PF00005 ABC transporter M1S50_09985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S50_09995 PF02684 Lipid-A-disaccharide synthetase M1S50_10000 PF07715 TonB-dependent Receptor Plug Domain M1S50_10000 PF00593 TonB dependent receptor M1S50_10020 PF01925 Sulfite exporter TauE/SafE M1S50_10025 PF00793 DAHP synthetase I family M1S50_10030 PF02654 Cobalamin-5-phosphate synthase M1S50_10045 PF02277 Phosphoribosyltransferase M1S50_10050 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M1S50_10060 PF13419 Haloacid dehalogenase-like hydrolase M1S50_10085 PF00593 TonB dependent receptor M1S50_10085 PF07715 TonB-dependent Receptor Plug Domain M1S50_10100 PF04183 IucA / IucC family M1S50_10100 PF06276 Ferric iron reductase FhuF-like transporter M1S50_10105 PF06276 Ferric iron reductase FhuF-like transporter M1S50_10105 PF04183 IucA / IucC family M1S50_10110 PF07690 Major Facilitator Superfamily M1S50_10115 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S50_10120 PF04183 IucA / IucC family M1S50_10120 PF06276 Ferric iron reductase FhuF-like transporter M1S50_10125 PF04073 Aminoacyl-tRNA editing domain M1S50_10135 PF03109 ABC1 family M1S50_10140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_10140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_10140 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_10145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_10145 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_10145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_10150 PF00487 Fatty acid desaturase M1S50_10155 PF12833 Helix-turn-helix domain M1S50_10155 PF12852 Cupin M1S50_10160 PF00639 PPIC-type PPIASE domain M1S50_10160 PF09312 SurA N-terminal domain M1S50_10165 PF00216 Bacterial DNA-binding protein M1S50_10180 PF02082 Transcriptional regulator M1S50_10185 PF00266 Aminotransferase class-V M1S50_10190 PF01592 NifU-like N terminal domain M1S50_10195 PF01521 Iron-sulphur cluster biosynthesis M1S50_10200 PF00226 DnaJ domain M1S50_10200 PF07743 HSCB C-terminal oligomerisation domain M1S50_10205 PF00012 Hsp70 protein M1S50_10210 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S50_10215 PF00211 Adenylate and Guanylate cyclase catalytic domain M1S50_10225 PF02559 CarD-like/TRCF domain M1S50_10225 PF00270 DEAD/DEAH box helicase M1S50_10225 PF00271 Helicase conserved C-terminal domain M1S50_10225 PF03461 TRCF domain M1S50_10225 PF17757 UvrB interaction domain M1S50_10245 PF03737 Aldolase/RraA M1S50_10250 PF13460 NAD(P)H-binding M1S50_10255 PF01649 Ribosomal protein S20 M1S50_10265 PF00459 Inositol monophosphatase family M1S50_10280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S50_10280 PF00005 ABC transporter M1S50_10285 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_10290 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_10295 PF01432 Peptidase family M3 M1S50_10315 PF07715 TonB-dependent Receptor Plug Domain M1S50_10315 PF00593 TonB dependent receptor M1S50_10325 PF01618 MotA/TolQ/ExbB proton channel family M1S50_10330 PF02472 Biopolymer transport protein ExbD/TolR M1S50_10335 PF02472 Biopolymer transport protein ExbD/TolR M1S50_10345 PF01274 Malate synthase M1S50_10350 PF03969 AFG1-like ATPase M1S50_10360 PF00743 Flavin-binding monooxygenase-like M1S50_10370 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M1S50_10380 PF00216 Bacterial DNA-binding protein M1S50_10385 PF00575 S1 RNA binding domain M1S50_10390 PF02224 Cytidylate kinase M1S50_10400 PF14437 MafB19-like deaminase M1S50_10410 PF03167 Uracil DNA glycosylase superfamily M1S50_10420 PF03934 Type II secretion system (T2SS), protein K M1S50_10425 PF07963 Prokaryotic N-terminal methylation motif M1S50_10425 PF11612 Type II secretion system (T2SS), protein J M1S50_10430 PF02501 Type II secretion system (T2SS), protein I M1S50_10430 PF07963 Prokaryotic N-terminal methylation motif M1S50_10445 PF01026 TatD related DNase M1S50_10455 PF09115 DNA polymerase III, delta subunit, C terminal M1S50_10460 PF02348 Cytidylyltransferase M1S50_10465 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M1S50_10470 PF00005 ABC transporter M1S50_10470 PF00664 ABC transporter transmembrane region M1S50_10480 PF01618 MotA/TolQ/ExbB proton channel family M1S50_10485 PF02195 ParB-like nuclease domain M1S50_10485 PF17762 HTH domain found in ParB protein M1S50_10490 PF13614 AAA domain M1S50_10495 PF02527 rRNA small subunit methyltransferase G M1S50_10500 PF00483 Nucleotidyl transferase M1S50_10505 PF01636 Phosphotransferase enzyme family M1S50_10510 PF04453 LPS transport system D M1S50_10510 PF03968 OstA-like protein M1S50_10515 PF00639 PPIC-type PPIASE domain M1S50_10515 PF09312 SurA N-terminal domain M1S50_10520 PF01116 Fructose-bisphosphate aldolase class-II M1S50_10530 PF00162 Phosphoglycerate kinase M1S50_10540 PF02545 Maf-like protein M1S50_10545 PF08007 Cupin superfamily protein M1S50_10560 PF00375 Sodium:dicarboxylate symporter family M1S50_10565 PF06912 Protein of unknown function (DUF1275) M1S50_10570 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M1S50_10575 PF00664 ABC transporter transmembrane region M1S50_10575 PF00005 ABC transporter M1S50_10585 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S50_10585 PF12833 Helix-turn-helix domain M1S50_10590 PF01597 Glycine cleavage H-protein M1S50_10595 PF02146 Sir2 family M1S50_10600 PF00474 Sodium:solute symporter family M1S50_10605 PF01037 Lrp/AsnC ligand binding domain M1S50_10610 PF00171 Aldehyde dehydrogenase family M1S50_10610 PF01619 Proline dehydrogenase M1S50_10610 PF14850 DNA-binding domain of Proline dehydrogenase M1S50_10610 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M1S50_10615 PF04229 GrpB protein M1S50_10620 PF05958 tRNA (Uracil-5-)-methyltransferase M1S50_10630 PF09992 Phosphodiester glycosidase M1S50_10640 PF04264 YceI-like domain M1S50_10650 PF02780 Transketolase, C-terminal domain M1S50_10650 PF00456 Transketolase, thiamine diphosphate binding domain M1S50_10650 PF02779 Transketolase, pyrimidine binding domain M1S50_10655 PF02773 S-adenosylmethionine synthetase, C-terminal domain M1S50_10655 PF02772 S-adenosylmethionine synthetase, central domain M1S50_10655 PF00438 S-adenosylmethionine synthetase, N-terminal domain M1S50_10680 PF00905 Penicillin binding protein transpeptidase domain M1S50_10695 PF02075 Crossover junction endodeoxyribonuclease RuvC M1S50_10700 PF01256 Carbohydrate kinase M1S50_10700 PF03853 YjeF-related protein N-terminus M1S50_10705 PF08331 Domain of unknown function (DUF1730) M1S50_10710 PF04055 Radical SAM superfamily M1S50_10710 PF06968 Biotin and Thiamin Synthesis associated domain M1S50_10725 PF16970 Type-1 fimbrial protein, A M1S50_10730 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S50_10730 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S50_10735 PF13953 PapC C-terminal domain M1S50_10735 PF00577 Outer membrane usher protein M1S50_10735 PF13954 PapC N-terminal domain M1S50_10755 PF00892 EamA-like transporter family M1S50_10765 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S50_10775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_10775 PF03466 LysR substrate binding domain M1S50_10795 PF00440 Bacterial regulatory proteins, tetR family M1S50_10805 PF01709 Transcriptional regulator M1S50_10810 PF01037 Lrp/AsnC ligand binding domain M1S50_10820 PF00005 ABC transporter M1S50_10825 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_10830 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_10845 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S50_10845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_10855 PF00296 Luciferase-like monooxygenase M1S50_10860 PF03180 NLPA lipoprotein M1S50_10865 PF03180 NLPA lipoprotein M1S50_10870 PF09383 NIL domain M1S50_10870 PF00005 ABC transporter M1S50_10875 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_10880 PF01926 50S ribosome-binding GTPase M1S50_10880 PF06071 Protein of unknown function (DUF933) M1S50_10905 PF03591 AzlC protein M1S50_10910 PF05437 Branched-chain amino acid transport protein (AzlD) M1S50_10920 PF02222 ATP-grasp domain M1S50_10925 PF01909 Nucleotidyltransferase domain M1S50_10925 PF01966 HD domain M1S50_10925 PF08335 GlnD PII-uridylyltransferase M1S50_10930 PF00155 Aminotransferase class I and II M1S50_10940 PF12833 Helix-turn-helix domain M1S50_10940 PF12852 Cupin M1S50_10945 PF00255 Glutathione peroxidase M1S50_10950 PF01641 SelR domain M1S50_10955 PF00155 Aminotransferase class I and II M1S50_10960 PF00375 Sodium:dicarboxylate symporter family M1S50_10965 PF00710 Asparaginase, N-terminal M1S50_10965 PF17763 Glutaminase/Asparaginase C-terminal domain M1S50_10970 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S50_10970 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S50_10970 PF01336 OB-fold nucleic acid binding domain M1S50_10970 PF02811 PHP domain M1S50_10970 PF14579 Helix-hairpin-helix motif M1S50_10975 PF00588 SpoU rRNA Methylase family M1S50_10980 PF00132 Bacterial transferase hexapeptide (six repeats) M1S50_10995 PF13192 Thioredoxin domain M1S50_10995 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_11010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_11010 PF03466 LysR substrate binding domain M1S50_11015 PF01758 Sodium Bile acid symporter family M1S50_11020 PF01022 Bacterial regulatory protein, arsR family M1S50_11025 PF03960 ArsC family M1S50_11035 PF13382 Adenine deaminase C-terminal domain M1S50_11035 PF01979 Amidohydrolase family M1S50_11045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_11045 PF03466 LysR substrate binding domain M1S50_11060 PF01177 Asp/Glu/Hydantoin racemase M1S50_11065 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M1S50_11070 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_11075 PF00005 ABC transporter M1S50_11080 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S50_11090 PF00083 Sugar (and other) transporter M1S50_11095 PF00296 Luciferase-like monooxygenase M1S50_11100 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S50_11100 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_11100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_11110 PF01654 Cytochrome bd terminal oxidase subunit I M1S50_11115 PF02322 Cytochrome bd terminal oxidase subunit II M1S50_11125 PF00392 Bacterial regulatory proteins, gntR family M1S50_11125 PF00155 Aminotransferase class I and II M1S50_11130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_11130 PF03466 LysR substrate binding domain M1S50_11145 PF00698 Acyl transferase domain M1S50_11150 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M1S50_11160 PF01039 Carboxyl transferase domain M1S50_11165 PF06857 Malonate decarboxylase delta subunit (MdcD) M1S50_11170 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M1S50_11175 PF16957 Malonate decarboxylase, alpha subunit, transporter M1S50_11180 PF07690 Major Facilitator Superfamily M1S50_11195 PF00155 Aminotransferase class I and II M1S50_11195 PF00392 Bacterial regulatory proteins, gntR family M1S50_11200 PF04172 LrgB-like family M1S50_11205 PF03788 LrgA family M1S50_11210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_11210 PF03466 LysR substrate binding domain M1S50_11215 PF14834 Glutathione S-transferase, C-terminal domain M1S50_11215 PF02798 Glutathione S-transferase, N-terminal domain M1S50_11220 PF02798 Glutathione S-transferase, N-terminal domain M1S50_11225 PF03466 LysR substrate binding domain M1S50_11225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_11235 PF00581 Rhodanese-like domain M1S50_11240 PF00132 Bacterial transferase hexapeptide (six repeats) M1S50_11250 PF00266 Aminotransferase class-V M1S50_11260 PF01810 LysE type translocator M1S50_11265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_11265 PF03466 LysR substrate binding domain M1S50_11275 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S50_11280 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S50_11285 PF00005 ABC transporter M1S50_11290 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_11295 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_11310 PF00072 Response regulator receiver domain M1S50_11315 PF00512 His Kinase A (phospho-acceptor) domain M1S50_11315 PF09308 LuxQ, periplasmic M1S50_11315 PF00072 Response regulator receiver domain M1S50_11315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_11325 PF01037 Lrp/AsnC ligand binding domain M1S50_11325 PF13404 AsnC-type helix-turn-helix domain M1S50_11335 PF00717 Peptidase S24-like M1S50_11360 PF06628 Catalase-related immune-responsive M1S50_11360 PF00199 Catalase M1S50_11360 PF18011 C-terminal domain found in long catalases M1S50_11370 PF02464 Competence-damaged protein M1S50_11370 PF18146 Damage-inducible protein CinA KH domain M1S50_11370 PF00994 Probable molybdopterin binding domain M1S50_11405 PF03466 LysR substrate binding domain M1S50_11405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_11425 PF00501 AMP-binding enzyme M1S50_11425 PF13193 AMP-binding enzyme C-terminal domain M1S50_11430 PF00440 Bacterial regulatory proteins, tetR family M1S50_11435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_11435 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_11435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_11440 PF01039 Carboxyl transferase domain M1S50_11445 PF00378 Enoyl-CoA hydratase/isomerase M1S50_11450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S50_11450 PF18140 Propionyl-coenzyme A carboxylase BT domain M1S50_11450 PF02785 Biotin carboxylase C-terminal domain M1S50_11450 PF00289 Biotin carboxylase, N-terminal domain M1S50_11450 PF00364 Biotin-requiring enzyme M1S50_11455 PF00682 HMGL-like M1S50_11460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_11460 PF03466 LysR substrate binding domain M1S50_11475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_11475 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S50_11475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_11475 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_11485 PF07690 Major Facilitator Superfamily M1S50_11495 PF01144 Coenzyme A transferase M1S50_11500 PF01144 Coenzyme A transferase M1S50_11505 PF07690 Major Facilitator Superfamily M1S50_11510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_11510 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_11510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_11515 PF00378 Enoyl-CoA hydratase/isomerase M1S50_11525 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S50_11525 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S50_11525 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S50_11530 PF00108 Thiolase, N-terminal domain M1S50_11530 PF02803 Thiolase, C-terminal domain M1S50_11535 PF09339 IclR helix-turn-helix domain M1S50_11540 PF07690 Major Facilitator Superfamily M1S50_11545 PF03060 Nitronate monooxygenase M1S50_11550 PF00378 Enoyl-CoA hydratase/isomerase M1S50_11555 PF09339 IclR helix-turn-helix domain M1S50_11560 PF02515 CoA-transferase family III M1S50_11565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_11565 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_11565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_11570 PF07690 Major Facilitator Superfamily M1S50_11575 PF13419 Haloacid dehalogenase-like hydrolase M1S50_11580 PF00266 Aminotransferase class-V M1S50_11585 PF01266 FAD dependent oxidoreductase M1S50_11590 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_11595 PF08402 TOBE domain M1S50_11595 PF00005 ABC transporter M1S50_11605 PF00392 Bacterial regulatory proteins, gntR family M1S50_11605 PF07702 UTRA domain M1S50_11610 PF01494 FAD binding domain M1S50_11615 PF01614 Bacterial transcriptional regulator M1S50_11615 PF09339 IclR helix-turn-helix domain M1S50_11620 PF02525 Flavodoxin-like fold M1S50_11625 PF03466 LysR substrate binding domain M1S50_11625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_11630 PF02627 Carboxymuconolactone decarboxylase family M1S50_11635 PF00171 Aldehyde dehydrogenase family M1S50_11645 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S50_11655 PF00171 Aldehyde dehydrogenase family M1S50_11660 PF00296 Luciferase-like monooxygenase M1S50_11665 PF01613 Flavin reductase like domain M1S50_11670 PF12697 Alpha/beta hydrolase family M1S50_11690 PF01292 Prokaryotic cytochrome b561 M1S50_11695 PF00199 Catalase M1S50_11730 PF03061 Thioesterase superfamily M1S50_11735 PF00132 Bacterial transferase hexapeptide (six repeats) M1S50_11740 PF08223 PaaX-like protein C-terminal domain M1S50_11740 PF07848 PaaX-like protein M1S50_11745 PF00501 AMP-binding enzyme M1S50_11745 PF14535 AMP-binding enzyme C-terminal domain M1S50_11750 PF02803 Thiolase, C-terminal domain M1S50_11750 PF00108 Thiolase, N-terminal domain M1S50_11755 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S50_11755 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S50_11755 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S50_11760 PF00378 Enoyl-CoA hydratase/isomerase M1S50_11765 PF00378 Enoyl-CoA hydratase/isomerase M1S50_11770 PF00175 Oxidoreductase NAD-binding domain M1S50_11770 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S50_11770 PF00970 Oxidoreductase FAD-binding domain M1S50_11775 PF01883 Iron-sulfur cluster assembly protein M1S50_11780 PF05138 Phenylacetic acid catabolic protein M1S50_11785 PF06243 Phenylacetic acid degradation B M1S50_11790 PF05138 Phenylacetic acid catabolic protein M1S50_11795 PF00171 Aldehyde dehydrogenase family M1S50_11795 PF01575 MaoC like domain M1S50_11800 PF03313 Serine dehydratase alpha chain M1S50_11800 PF03315 Serine dehydratase beta chain M1S50_11805 PF13520 Amino acid permease M1S50_11810 PF00171 Aldehyde dehydrogenase family M1S50_11815 PF00083 Sugar (and other) transporter M1S50_11825 PF04324 BFD-like [2Fe-2S] binding domain M1S50_11825 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_11835 PF01266 FAD dependent oxidoreductase M1S50_11840 PF05544 Proline racemase M1S50_11845 PF00392 Bacterial regulatory proteins, gntR family M1S50_11855 PF00701 Dihydrodipicolinate synthetase family M1S50_11865 PF00376 MerR family regulatory protein M1S50_11865 PF09278 MerR, DNA binding M1S50_11880 PF02677 Epoxyqueuosine reductase QueH M1S50_11895 PF07690 Major Facilitator Superfamily M1S50_11900 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S50_11910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_11910 PF03466 LysR substrate binding domain M1S50_11930 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M1S50_11935 PF06812 ImpA, N-terminal, type VI secretion system M1S50_11940 PF00004 ATPase family associated with various cellular activities (AAA) M1S50_11940 PF07724 AAA domain (Cdc48 subfamily) M1S50_11940 PF17871 AAA lid domain M1S50_11940 PF10431 C-terminal, D2-small domain, of ClpB protein M1S50_11955 PF00691 OmpA family M1S50_11955 PF01389 OmpA-like transmembrane domain M1S50_11965 PF06761 Intracellular multiplication and human macrophage-killing M1S50_11965 PF14331 ImcF-related N-terminal domain M1S50_11965 PF06744 Type VI secretion protein IcmF C-terminal M1S50_11980 PF05947 Type VI secretion system, TssF M1S50_11995 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M1S50_12020 PF00005 ABC transporter M1S50_12025 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S50_12030 PF01425 Amidase M1S50_12035 PF08753 NikR C terminal nickel binding domain M1S50_12035 PF01402 Ribbon-helix-helix protein, copG family M1S50_12055 PF02525 Flavodoxin-like fold M1S50_12060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S50_12060 PF02785 Biotin carboxylase C-terminal domain M1S50_12060 PF00289 Biotin carboxylase, N-terminal domain M1S50_12075 PF00107 Zinc-binding dehydrogenase M1S50_12075 PF13823 Alcohol dehydrogenase GroES-associated M1S50_12075 PF08240 Alcohol dehydrogenase GroES-like domain M1S50_12085 PF00440 Bacterial regulatory proteins, tetR family M1S50_12105 PF00654 Voltage gated chloride channel M1S50_12110 PF00364 Biotin-requiring enzyme M1S50_12110 PF02785 Biotin carboxylase C-terminal domain M1S50_12110 PF00289 Biotin carboxylase, N-terminal domain M1S50_12110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S50_12120 PF07286 Protein of unknown function (DUF1445) M1S50_12125 PF03746 LamB/YcsF family M1S50_12130 PF01566 Natural resistance-associated macrophage protein M1S50_12135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_12135 PF03466 LysR substrate binding domain M1S50_12150 PF03527 RHS protein M1S50_12150 PF05593 RHS Repeat M1S50_12155 PF13296 Putative type VI secretion system Rhs element Vgr M1S50_12155 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S50_12155 PF04717 Type VI secretion system, phage-baseplate injector M1S50_12165 PF13419 Haloacid dehalogenase-like hydrolase M1S50_12185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S50_12185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S50_12205 PF07690 Major Facilitator Superfamily M1S50_12220 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S50_12225 PF03707 Bacterial signalling protein N terminal repeat M1S50_12225 PF00990 Diguanylate cyclase, GGDEF domain M1S50_12225 PF00563 EAL domain M1S50_12230 PF00892 EamA-like transporter family M1S50_12235 PF01037 Lrp/AsnC ligand binding domain M1S50_12240 PF05190 MutS family domain IV M1S50_12240 PF01624 MutS domain I M1S50_12240 PF05188 MutS domain II M1S50_12240 PF05192 MutS domain III M1S50_12240 PF00488 MutS domain V M1S50_12250 PF11953 Domain of unknown function (DUF3470) M1S50_12250 PF00037 4Fe-4S binding domain M1S50_12260 PF01596 O-methyltransferase M1S50_12275 PF01205 Uncharacterized protein family UPF0029 M1S50_12285 PF03412 Peptidase C39 family M1S50_12285 PF00005 ABC transporter M1S50_12285 PF00664 ABC transporter transmembrane region M1S50_12290 PF02321 Outer membrane efflux protein M1S50_12295 PF12399 Branched-chain amino acid ATP-binding cassette transporter M1S50_12295 PF00005 ABC transporter M1S50_12300 PF03968 OstA-like protein M1S50_12315 PF00571 CBS domain M1S50_12315 PF01380 SIS domain M1S50_12320 PF01406 tRNA synthetases class I (C) catalytic domain M1S50_12320 PF09190 DALR domain M1S50_12345 PF01638 HxlR-like helix-turn-helix M1S50_12350 PF07690 Major Facilitator Superfamily M1S50_12375 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S50_12375 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S50_12385 PF00313 'Cold-shock' DNA-binding domain M1S50_12390 PF01810 LysE type translocator M1S50_12420 PF02601 Exonuclease VII, large subunit M1S50_12420 PF13742 OB-fold nucleic acid binding domain M1S50_12455 PF09278 MerR, DNA binding M1S50_12455 PF00376 MerR family regulatory protein M1S50_12460 PF00403 Heavy-metal-associated domain M1S50_12465 PF00403 Heavy-metal-associated domain M1S50_12470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_12470 PF03466 LysR substrate binding domain M1S50_12480 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S50_12480 PF00355 Rieske [2Fe-2S] domain M1S50_12485 PF00866 Ring hydroxylating beta subunit M1S50_12490 PF00970 Oxidoreductase FAD-binding domain M1S50_12490 PF00175 Oxidoreductase NAD-binding domain M1S50_12490 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S50_12495 PF00106 short chain dehydrogenase M1S50_12500 PF03594 Benzoate membrane transport protein M1S50_12505 PF07690 Major Facilitator Superfamily M1S50_12515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M1S50_12515 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M1S50_12520 PF00270 DEAD/DEAH box helicase M1S50_12520 PF11898 Domain of unknown function (DUF3418) M1S50_12520 PF04408 Helicase associated domain (HA2) M1S50_12520 PF00271 Helicase conserved C-terminal domain M1S50_12520 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M1S50_12525 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S50_12525 PF00578 AhpC/TSA family M1S50_12545 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_12545 PF13192 Thioredoxin domain M1S50_12555 PF00043 Glutathione S-transferase, C-terminal domain M1S50_12555 PF02798 Glutathione S-transferase, N-terminal domain M1S50_12565 PF02390 Putative methyltransferase M1S50_12570 PF13417 Glutathione S-transferase, N-terminal domain M1S50_12570 PF00043 Glutathione S-transferase, C-terminal domain M1S50_12580 PF00691 OmpA family M1S50_12580 PF13488 Glycine zipper M1S50_12585 PF01979 Amidohydrolase family M1S50_12590 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S50_12590 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S50_12600 PF10672 S-adenosylmethionine-dependent methyltransferase M1S50_12600 PF02926 THUMP domain M1S50_12600 PF01170 Putative RNA methylase family UPF0020 M1S50_12615 PF10431 C-terminal, D2-small domain, of ClpB protein M1S50_12615 PF07724 AAA domain (Cdc48 subfamily) M1S50_12615 PF02861 Clp amino terminal domain, pathogenicity island component M1S50_12615 PF17871 AAA lid domain M1S50_12615 PF00004 ATPase family associated with various cellular activities (AAA) M1S50_12630 PF02566 OsmC-like protein M1S50_12640 PF00027 Cyclic nucleotide-binding domain M1S50_12640 PF13545 Crp-like helix-turn-helix domain M1S50_12650 PF00248 Aldo/keto reductase family M1S50_12665 PF00709 Adenylosuccinate synthetase M1S50_12670 PF13393 Histidyl-tRNA synthetase M1S50_12675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S50_12675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S50_12680 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S50_12680 PF01411 tRNA synthetases class II (A) M1S50_12680 PF02272 DHHA1 domain M1S50_12685 PF00696 Amino acid kinase family M1S50_12685 PF13840 ACT domain M1S50_12685 PF01842 ACT domain M1S50_12690 PF02599 Global regulator protein family M1S50_12695 PF01351 Ribonuclease HII M1S50_12705 PF01292 Prokaryotic cytochrome b561 M1S50_12710 PF00962 Adenosine/AMP deaminase M1S50_12715 PF00860 Permease family M1S50_12725 PF00743 Flavin-binding monooxygenase-like M1S50_12730 PF00106 short chain dehydrogenase M1S50_12740 PF17954 Quercetinase C-terminal cupin domain M1S50_12740 PF02678 Pirin M1S50_12745 PF17932 Tetracyclin repressor-like, C-terminal domain M1S50_12745 PF00440 Bacterial regulatory proteins, tetR family M1S50_12755 PF00106 short chain dehydrogenase M1S50_12765 PF13610 DDE domain M1S50_12775 PF00239 Resolvase, N terminal domain M1S50_12775 PF02796 Helix-turn-helix domain of resolvase M1S50_12780 PF11809 Domain of unknown function (DUF3330) M1S50_12780 PF00563 EAL domain M1S50_12790 PF13610 DDE domain M1S50_12795 PF01636 Phosphotransferase enzyme family M1S50_12810 PF13610 DDE domain M1S50_12815 PF00239 Resolvase, N terminal domain M1S50_12815 PF02796 Helix-turn-helix domain of resolvase M1S50_12825 PF13610 DDE domain M1S50_12835 PF00239 Resolvase, N terminal domain M1S50_12835 PF02796 Helix-turn-helix domain of resolvase M1S50_12845 PF01636 Phosphotransferase enzyme family M1S50_12860 PF13610 DDE domain M1S50_12875 PF13610 DDE domain M1S50_12885 PF00239 Resolvase, N terminal domain M1S50_12885 PF02796 Helix-turn-helix domain of resolvase M1S50_12890 PF13610 DDE domain M1S50_12900 PF04958 Arginine N-succinyltransferase beta subunit M1S50_12905 PF00202 Aminotransferase class-III M1S50_12915 PF00171 Aldehyde dehydrogenase family M1S50_12925 PF07729 FCD domain M1S50_12925 PF00392 Bacterial regulatory proteins, gntR family M1S50_12935 PF00324 Amino acid permease M1S50_12940 PF01266 FAD dependent oxidoreductase M1S50_12945 PF00324 Amino acid permease M1S50_12985 PF03527 RHS protein M1S50_12985 PF05593 RHS Repeat M1S50_12990 PF13296 Putative type VI secretion system Rhs element Vgr M1S50_12990 PF04717 Type VI secretion system, phage-baseplate injector M1S50_12990 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S50_13010 PF03180 NLPA lipoprotein M1S50_13015 PF05987 Bacterial protein of unknown function (DUF898) M1S50_13030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S50_13030 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_13035 PF00764 Arginosuccinate synthase M1S50_13040 PF00563 EAL domain M1S50_13040 PF01590 GAF domain M1S50_13040 PF00990 Diguanylate cyclase, GGDEF domain M1S50_13040 PF00360 Phytochrome region M1S50_13045 PF01979 Amidohydrolase family M1S50_13050 PF00929 Exonuclease M1S50_13060 PF07715 TonB-dependent Receptor Plug Domain M1S50_13060 PF00593 TonB dependent receptor M1S50_13065 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_13065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S50_13070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S50_13070 PF00005 ABC transporter M1S50_13075 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_13075 PF12911 N-terminal TM domain of oligopeptide transport permease C M1S50_13080 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_13085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1S50_13090 PF01464 Transglycosylase SLT domain M1S50_13090 PF01476 LysM domain M1S50_13090 PF01464 Transglycosylase SLT domain M1S50_13090 PF01476 LysM domain M1S50_13095 PF00929 Exonuclease M1S50_13105 PF00293 NUDIX domain M1S50_13105 PF09297 NADH pyrophosphatase zinc ribbon domain M1S50_13115 PF04972 BON domain M1S50_13120 PF02021 Uncharacterised protein family UPF0102 M1S50_13125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S50_13135 PF03466 LysR substrate binding domain M1S50_13135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_13140 PF01810 LysE type translocator M1S50_13150 PF13411 MerR HTH family regulatory protein M1S50_13160 PF01494 FAD binding domain M1S50_13165 PF01494 FAD binding domain M1S50_13170 PF05195 Aminopeptidase P, N-terminal domain M1S50_13170 PF00557 Metallopeptidase family M24 M1S50_13210 PF00884 Sulfatase M1S50_13210 PF08019 Phosphoethanolamine transferase EptA/EptB M1S50_13255 PF08525 Opacity-associated protein A N-terminal motif M1S50_13255 PF01551 Peptidase family M23 M1S50_13255 PF01476 LysM domain M1S50_13580 PF01812 5-formyltetrahydrofolate cyclo-ligase family M1S50_13585 PF00691 OmpA family M1S50_13585 PF04355 SmpA / OmlA family M1S50_13590 PF13018 Extended Signal Peptide of Type V secretion system M1S50_13590 PF03895 YadA-like membrane anchor domain M1S50_13590 PF05658 Head domain of trimeric autotransporter adhesin M1S50_13590 PF05662 Coiled stalk of trimeric autotransporter adhesin M1S50_13595 PF00004 ATPase family associated with various cellular activities (AAA) M1S50_13595 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S50_13595 PF02190 ATP-dependent protease La (LON) substrate-binding domain M1S50_13600 PF02590 Predicted SPOUT methyltransferase M1S50_13605 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M1S50_13615 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S50_13615 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S50_13620 PF04060 Putative Fe-S cluster M1S50_13625 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S50_13625 PF00633 Helix-hairpin-helix motif M1S50_13625 PF10576 Iron-sulfur binding domain of endonuclease III M1S50_13635 PF05191 Adenylate kinase, active site lid M1S50_13650 PF03717 Penicillin-binding Protein dimerisation domain M1S50_13650 PF00905 Penicillin binding protein transpeptidase domain M1S50_13665 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S50_13670 PF01730 UreF M1S50_13675 PF05194 UreE urease accessory protein, C-terminal domain M1S50_13675 PF02814 UreE urease accessory protein, N-terminal domain M1S50_13680 PF00449 Urease alpha-subunit, N-terminal domain M1S50_13680 PF01979 Amidohydrolase family M1S50_13685 PF00699 Urease beta subunit M1S50_13690 PF00547 Urease, gamma subunit M1S50_13695 PF01774 UreD urease accessory protein M1S50_13710 PF00463 Isocitrate lyase family M1S50_13715 PF03466 LysR substrate binding domain M1S50_13715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_13720 PF01595 Cyclin M transmembrane N-terminal domain M1S50_13720 PF03471 Transporter associated domain M1S50_13720 PF00571 CBS domain M1S50_13725 PF03600 Citrate transporter M1S50_13740 PF00009 Elongation factor Tu GTP binding domain M1S50_13745 PF01507 Phosphoadenosine phosphosulfate reductase family M1S50_13755 PF14052 Capsule assembly protein Wzi M1S50_13760 PF01336 OB-fold nucleic acid binding domain M1S50_13760 PF00152 tRNA synthetases class II (D, K and N) M1S50_13775 PF00301 Rubredoxin M1S50_13780 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_13780 PF18113 Rubredoxin binding C-terminal domain M1S50_13785 PF00561 alpha/beta hydrolase fold M1S50_13790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_13790 PF03466 LysR substrate binding domain M1S50_13800 PF02503 Polyphosphate kinase middle domain M1S50_13800 PF13090 Polyphosphate kinase C-terminal domain 2 M1S50_13800 PF17941 Polyphosphate kinase C-terminal domain 1 M1S50_13800 PF13089 Polyphosphate kinase N-terminal domain M1S50_13805 PF00912 Transglycosylase M1S50_13810 PF01694 Rhomboid family M1S50_13820 PF00005 ABC transporter M1S50_13825 PF13472 GDSL-like Lipase/Acylhydrolase family M1S50_13830 PF00484 Carbonic anhydrase M1S50_13835 PF00561 alpha/beta hydrolase fold M1S50_13845 PF07715 TonB-dependent Receptor Plug Domain M1S50_13845 PF00593 TonB dependent receptor M1S50_13850 PF01106 NifU-like domain M1S50_13850 PF01521 Iron-sulphur cluster biosynthesis M1S50_13860 PF00884 Sulfatase M1S50_13865 PF03781 Sulfatase-modifying factor enzyme 1 M1S50_13880 PF00291 Pyridoxal-phosphate dependent enzyme M1S50_13885 PF01384 Phosphate transporter family M1S50_13890 PF02310 B12 binding domain M1S50_13890 PF02607 B12 binding domain M1S50_13890 PF02965 Vitamin B12 dependent methionine synthase, activation domain M1S50_13890 PF00809 Pterin binding enzyme M1S50_13890 PF02574 Homocysteine S-methyltransferase M1S50_13895 PF02780 Transketolase, C-terminal domain M1S50_13895 PF02779 Transketolase, pyrimidine binding domain M1S50_13900 PF00456 Transketolase, thiamine diphosphate binding domain M1S50_13905 PF07690 Major Facilitator Superfamily M1S50_13915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_13915 PF03466 LysR substrate binding domain M1S50_13925 PF01263 Aldose 1-epimerase M1S50_13930 PF07690 Major Facilitator Superfamily M1S50_13935 PF12833 Helix-turn-helix domain M1S50_13935 PF02311 AraC-like ligand binding domain M1S50_13940 PF04960 Glutaminase M1S50_13945 PF01327 Polypeptide deformylase M1S50_13950 PF07690 Major Facilitator Superfamily M1S50_13960 PF00205 Thiamine pyrophosphate enzyme, central domain M1S50_13960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S50_13960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S50_13965 PF00171 Aldehyde dehydrogenase family M1S50_13970 PF01958 Domain of unknown function DUF108 M1S50_13970 PF03447 Homoserine dehydrogenase, NAD binding domain M1S50_13980 PF12697 Alpha/beta hydrolase family M1S50_13990 PF07690 Major Facilitator Superfamily M1S50_13995 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_13995 PF14759 Reductase C-terminal M1S50_14000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S50_14010 PF00355 Rieske [2Fe-2S] domain M1S50_14020 PF00355 Rieske [2Fe-2S] domain M1S50_14025 PF09339 IclR helix-turn-helix domain M1S50_14025 PF01614 Bacterial transcriptional regulator M1S50_14040 PF00378 Enoyl-CoA hydratase/isomerase M1S50_14050 PF00535 Glycosyl transferase family 2 M1S50_14055 PF14883 Hypothetical glycosyl hydrolase family 13 M1S50_14055 PF01522 Polysaccharide deacetylase M1S50_14060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S50_14065 PF07152 YaeQ protein M1S50_14070 PF00375 Sodium:dicarboxylate symporter family M1S50_14075 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S50_14075 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S50_14085 PF03061 Thioesterase superfamily M1S50_14095 PF02028 BCCT, betaine/carnitine/choline family transporter M1S50_14100 PF02028 BCCT, betaine/carnitine/choline family transporter M1S50_14105 PF13977 BetI-type transcriptional repressor, C-terminal M1S50_14105 PF00440 Bacterial regulatory proteins, tetR family M1S50_14110 PF00171 Aldehyde dehydrogenase family M1S50_14115 PF05199 GMC oxidoreductase M1S50_14115 PF00732 GMC oxidoreductase M1S50_14120 PF06039 Malate:quinone oxidoreductase (Mqo) M1S50_14130 PF02574 Homocysteine S-methyltransferase M1S50_14135 PF13520 Amino acid permease M1S50_14160 PF00701 Dihydrodipicolinate synthetase family M1S50_14165 PF00083 Sugar (and other) transporter M1S50_14235 PF10544 T5orf172 domain M1S50_14240 PF13614 AAA domain M1S50_14260 PF00905 Penicillin binding protein transpeptidase domain M1S50_14340 PF02767 DNA polymerase III beta subunit, central domain M1S50_14340 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S50_14340 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S50_14380 PF05016 ParE toxin of type II toxin-antitoxin system, parDE M1S50_14530 PF07007 Lysozyme inhibitor LprI M1S50_14575 PF01695 IstB-like ATP binding protein M1S50_14585 PF00145 C-5 cytosine-specific DNA methylase M1S50_14630 PF01381 Helix-turn-helix M1S50_14630 PF00717 Peptidase S24-like M1S50_14665 PF00929 Exonuclease M1S50_14740 PF07690 Major Facilitator Superfamily M1S50_14745 PF13533 Biotin-lipoyl like M1S50_14750 PF03061 Thioesterase superfamily M1S50_14755 PF00490 Delta-aminolevulinic acid dehydratase M1S50_14760 PF01266 FAD dependent oxidoreductase M1S50_14765 PF08338 Domain of unknown function (DUF1731) M1S50_14765 PF01370 NAD dependent epimerase/dehydratase family M1S50_14785 PF12320 Type 5 capsule protein repressor C-terminal domain M1S50_14785 PF00149 Calcineurin-like phosphoesterase M1S50_14795 PF01168 Alanine racemase, N-terminal domain M1S50_14800 PF00437 Type II/IV secretion system protein M1S50_14805 PF00437 Type II/IV secretion system protein M1S50_14810 PF01475 Ferric uptake regulator family M1S50_14815 PF04355 SmpA / OmlA family M1S50_14820 PF03658 RnfH family Ubiquitin M1S50_14830 PF01814 Hemerythrin HHE cation binding domain M1S50_14835 PF13230 Glutamine amidotransferases class-II M1S50_14845 PF00696 Amino acid kinase family M1S50_14850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S50_14850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S50_14850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S50_14850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S50_14855 PF00692 dUTPase M1S50_14860 PF00580 UvrD/REP helicase N-terminal domain M1S50_14860 PF13361 UvrD-like helicase C-terminal domain M1S50_14865 PF00691 OmpA family M1S50_14865 PF13488 Glycine zipper M1S50_14870 PF01553 Acyltransferase M1S50_14880 PF03775 Septum formation inhibitor MinC, C-terminal domain M1S50_14885 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M1S50_14890 PF03776 Septum formation topological specificity factor MinE M1S50_14910 PF01810 LysE type translocator M1S50_14915 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M1S50_14915 PF17854 FtsK alpha domain M1S50_14915 PF09397 Ftsk gamma domain M1S50_14915 PF01580 FtsK/SpoIIIE family M1S50_14920 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S50_14925 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M1S50_14930 PF04377 Arginine-tRNA-protein transferase, C terminus M1S50_14930 PF04376 Arginine-tRNA-protein transferase, N terminus M1S50_14935 PF00583 Acetyltransferase (GNAT) family M1S50_14950 PF00009 Elongation factor Tu GTP binding domain M1S50_14950 PF03144 Elongation factor Tu domain 2 M1S50_14950 PF03143 Elongation factor Tu C-terminal domain M1S50_14955 PF00679 Elongation factor G C-terminus M1S50_14955 PF14492 Elongation Factor G, domain II M1S50_14955 PF00009 Elongation factor Tu GTP binding domain M1S50_14955 PF03144 Elongation factor Tu domain 2 M1S50_14955 PF03764 Elongation factor G, domain IV M1S50_14960 PF00177 Ribosomal protein S7p/S5e M1S50_14965 PF00164 Ribosomal protein S12/S23 M1S50_14975 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S50_14975 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S50_14980 PF03653 Uncharacterised protein family (UPF0093) M1S50_14985 PF05726 Pirin C-terminal cupin domain M1S50_14985 PF02678 Pirin M1S50_14995 PF00795 Carbon-nitrogen hydrolase M1S50_14995 PF02540 NAD synthase M1S50_15010 PF00970 Oxidoreductase FAD-binding domain M1S50_15010 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S50_15010 PF00175 Oxidoreductase NAD-binding domain M1S50_15015 PF00171 Aldehyde dehydrogenase family M1S50_15020 PF00355 Rieske [2Fe-2S] domain M1S50_15020 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S50_15025 PF07859 alpha/beta hydrolase fold M1S50_15030 PF02028 BCCT, betaine/carnitine/choline family transporter M1S50_15035 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S50_15040 PF03466 LysR substrate binding domain M1S50_15040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_15060 PF00037 4Fe-4S binding domain M1S50_15065 PF01467 Cytidylyltransferase-like M1S50_15070 PF01668 SmpB protein M1S50_15075 PF03358 NADPH-dependent FMN reductase M1S50_15080 PF02578 Multi-copper polyphenol oxidoreductase laccase M1S50_15085 PF00849 RNA pseudouridylate synthase M1S50_15085 PF01479 S4 domain M1S50_15090 PF13525 Outer membrane lipoprotein M1S50_15095 PF01807 CHC2 zinc finger M1S50_15095 PF08275 DNA primase catalytic core, N-terminal domain M1S50_15095 PF08278 DNA primase DnaG DnaB-binding M1S50_15095 PF10410 DnaB-helicase binding domain of primase M1S50_15100 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M1S50_15100 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M1S50_15100 PF01488 Shikimate / quinate 5-dehydrogenase M1S50_15110 PF03550 Outer membrane lipoprotein LolB M1S50_15115 PF08544 GHMP kinases C terminal M1S50_15115 PF00288 GHMP kinases N terminal domain M1S50_15140 PF14572 Phosphoribosyl synthetase-associated domain M1S50_15140 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S50_15145 PF01386 Ribosomal L25p family M1S50_15150 PF01195 Peptidyl-tRNA hydrolase M1S50_15155 PF02261 Aspartate decarboxylase M1S50_15170 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S50_15180 PF02581 Thiamine monophosphate synthase M1S50_15180 PF03070 TENA/THI-4/PQQC family M1S50_15180 PF08543 Phosphomethylpyrimidine kinase M1S50_15185 PF04972 BON domain M1S50_15185 PF01476 LysM domain M1S50_15190 PF00550 Phosphopantetheine attachment site M1S50_15200 PF00698 Acyl transferase domain M1S50_15205 PF01783 Ribosomal L32p protein family M1S50_15210 PF02620 Large ribosomal RNA subunit accumulation protein YceD M1S50_15215 PF04315 Elongation factor P hydroxylase M1S50_15220 PF01300 Telomere recombination M1S50_15225 PF02616 Segregation and condensation protein ScpA M1S50_15230 PF04079 Segregation and condensation complex subunit ScpB M1S50_15235 PF01479 S4 domain M1S50_15235 PF00849 RNA pseudouridylate synthase M1S50_15250 PF00155 Aminotransferase class I and II M1S50_15255 PF00202 Aminotransferase class-III M1S50_15255 PF06968 Biotin and Thiamin Synthesis associated domain M1S50_15255 PF04055 Radical SAM superfamily M1S50_15260 PF12697 Alpha/beta hydrolase family M1S50_15260 PF08241 Methyltransferase domain M1S50_15265 PF02358 Trehalose-phosphatase M1S50_15270 PF00982 Glycosyltransferase family 20 M1S50_15275 PF07690 Major Facilitator Superfamily M1S50_15280 PF00210 Ferritin-like domain M1S50_15285 PF00533 BRCA1 C Terminus (BRCT) domain M1S50_15285 PF01653 NAD-dependent DNA ligase adenylation domain M1S50_15285 PF03120 NAD-dependent DNA ligase OB-fold domain M1S50_15285 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M1S50_15285 PF12826 Helix-hairpin-helix motif M1S50_15295 PF06470 SMC proteins Flexible Hinge Domain M1S50_15295 PF02463 RecF/RecN/SMC N terminal domain M1S50_15305 PF01925 Sulfite exporter TauE/SafE M1S50_15315 PF03309 Type III pantothenate kinase M1S50_15320 PF00448 SRP54-type protein, GTPase domain M1S50_15320 PF02881 SRP54-type protein, helical bundle domain M1S50_15320 PF02978 Signal peptide binding domain M1S50_15330 PF01207 Dihydrouridine synthase (Dus) M1S50_15360 PF00692 dUTPase M1S50_15375 PF01048 Phosphorylase superfamily M1S50_15380 PF10609 NUBPL iron-transfer P-loop NTPase M1S50_15390 PF09334 tRNA synthetases class I (M) M1S50_15390 PF01588 Putative tRNA binding domain M1S50_15415 PF13533 Biotin-lipoyl like M1S50_15420 PF00291 Pyridoxal-phosphate dependent enzyme M1S50_15435 PF05552 Conserved TM helix M1S50_15450 PF00970 Oxidoreductase FAD-binding domain M1S50_15450 PF00175 Oxidoreductase NAD-binding domain M1S50_15455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_15455 PF03466 LysR substrate binding domain M1S50_15460 PF00313 'Cold-shock' DNA-binding domain M1S50_15470 PF00361 Proton-conducting membrane transporter M1S50_15475 PF00361 Proton-conducting membrane transporter M1S50_15480 PF00361 Proton-conducting membrane transporter M1S50_15480 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S50_15485 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S50_15490 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M1S50_15495 PF12838 4Fe-4S dicluster domain M1S50_15500 PF00146 NADH dehydrogenase M1S50_15505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S50_15505 PF00384 Molybdopterin oxidoreductase M1S50_15505 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M1S50_15510 PF10531 SLBB domain M1S50_15510 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M1S50_15510 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M1S50_15520 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M1S50_15520 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M1S50_15525 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M1S50_15530 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M1S50_15535 PF17151 Periplasmic sensor domain M1S50_15535 PF00990 Diguanylate cyclase, GGDEF domain M1S50_15545 PF00672 HAMP domain M1S50_15545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_15545 PF00512 His Kinase A (phospho-acceptor) domain M1S50_15550 PF00486 Transcriptional regulatory protein, C terminal M1S50_15550 PF00072 Response regulator receiver domain M1S50_15560 PF02867 Ribonucleotide reductase, barrel domain M1S50_15560 PF03477 ATP cone domain M1S50_15560 PF00317 Ribonucleotide reductase, all-alpha domain M1S50_15570 PF00268 Ribonucleotide reductase, small chain M1S50_15580 PF00672 HAMP domain M1S50_15580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_15580 PF13755 Sensor N-terminal transmembrane domain M1S50_15580 PF13756 Stimulus-sensing domain M1S50_15580 PF00512 His Kinase A (phospho-acceptor) domain M1S50_15650 PF01011 PQQ enzyme repeat M1S50_15650 PF13360 PQQ-like domain M1S50_15675 PF02567 Phenazine biosynthesis-like protein M1S50_15700 PF01613 Flavin reductase like domain M1S50_15705 PF08267 Cobalamin-independent synthase, N-terminal domain M1S50_15705 PF01717 Cobalamin-independent synthase, Catalytic domain M1S50_15715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_15715 PF03466 LysR substrate binding domain M1S50_15720 PF01810 LysE type translocator M1S50_15730 PF12833 Helix-turn-helix domain M1S50_15730 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S50_15735 PF01546 Peptidase family M20/M25/M40 M1S50_15735 PF07687 Peptidase dimerisation domain M1S50_15745 PF03466 LysR substrate binding domain M1S50_15745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_15750 PF07690 Major Facilitator Superfamily M1S50_15760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_15760 PF03466 LysR substrate binding domain M1S50_15765 PF14537 Cytochrome c3 M1S50_15765 PF00890 FAD binding domain M1S50_15775 PF02515 CoA-transferase family III M1S50_15780 PF07690 Major Facilitator Superfamily M1S50_15785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_15785 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_15785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_15790 PF03466 LysR substrate binding domain M1S50_15790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_15795 PF08240 Alcohol dehydrogenase GroES-like domain M1S50_15795 PF00107 Zinc-binding dehydrogenase M1S50_15800 PF00962 Adenosine/AMP deaminase M1S50_15825 PF02445 Quinolinate synthetase A protein M1S50_15830 PF01960 ArgJ family M1S50_15835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S50_15835 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S50_15840 PF00893 Small Multidrug Resistance protein M1S50_15850 PF05275 Copper resistance protein B precursor (CopB) M1S50_15855 PF00394 Multicopper oxidase M1S50_15855 PF07731 Multicopper oxidase M1S50_15855 PF07732 Multicopper oxidase M1S50_15870 PF00834 Ribulose-phosphate 3 epimerase family M1S50_15880 PF00756 Putative esterase M1S50_15890 PF04445 Putative SAM-dependent methyltransferase M1S50_15895 PF00814 Glycoprotease family M1S50_15900 PF00132 Bacterial transferase hexapeptide (six repeats) M1S50_15905 PF00293 NUDIX domain M1S50_15945 PF04715 Anthranilate synthase component I, N terminal region M1S50_15945 PF00425 chorismate binding enzyme M1S50_15950 PF00155 Aminotransferase class I and II M1S50_15955 PF00815 Histidinol dehydrogenase M1S50_15960 PF01634 ATP phosphoribosyltransferase M1S50_15965 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S50_15970 PF01722 BolA-like protein M1S50_15975 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M1S50_15980 PF00309 Sigma-54 factor, Activator interacting domain (AID) M1S50_15980 PF04963 Sigma-54 factor, core binding domain M1S50_15980 PF04552 Sigma-54, DNA binding domain M1S50_16025 PF00795 Carbon-nitrogen hydrolase M1S50_16035 PF01047 MarR family M1S50_16040 PF02566 OsmC-like protein M1S50_16045 PF00437 Type II/IV secretion system protein M1S50_16065 PF01612 3'-5' exonuclease M1S50_16065 PF00476 DNA polymerase family A M1S50_16065 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S50_16065 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S50_16070 PF02325 YGGT family M1S50_16075 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S50_16075 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S50_16080 PF11734 TilS substrate C-terminal domain M1S50_16080 PF09179 TilS substrate binding domain M1S50_16080 PF01171 PP-loop family M1S50_16085 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M1S50_16090 PF02541 Ppx/GppA phosphatase family M1S50_16095 PF00085 Thioredoxin M1S50_16100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S50_16100 PF07497 Rho termination factor, RNA-binding domain M1S50_16100 PF07498 Rho termination factor, N-terminal domain M1S50_16115 PF00216 Bacterial DNA-binding protein M1S50_16120 PF03483 B3/4 domain M1S50_16120 PF03484 tRNA synthetase B5 domain M1S50_16120 PF03147 Ferredoxin-fold anticodon binding domain M1S50_16120 PF01588 Putative tRNA binding domain M1S50_16120 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M1S50_16125 PF01409 tRNA synthetases class II core domain (F) M1S50_16125 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M1S50_16145 PF00453 Ribosomal protein L20 M1S50_16150 PF01632 Ribosomal protein L35 M1S50_16165 PF09335 SNARE associated Golgi protein M1S50_16170 PF00043 Glutathione S-transferase, C-terminal domain M1S50_16170 PF02798 Glutathione S-transferase, N-terminal domain M1S50_16175 PF00707 Translation initiation factor IF-3, C-terminal domain M1S50_16175 PF05198 Translation initiation factor IF-3, N-terminal domain M1S50_16180 PF03129 Anticodon binding domain M1S50_16180 PF02824 TGS domain M1S50_16180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S50_16180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S50_16185 PF00501 AMP-binding enzyme M1S50_16185 PF13193 AMP-binding enzyme C-terminal domain M1S50_16190 PF04751 Protein of unknown function (DUF615) M1S50_16195 PF00381 PTS HPr component phosphorylation site M1S50_16200 PF03668 P-loop ATPase protein family M1S50_16205 PF02569 Pantoate-beta-alanine ligase M1S50_16210 PF02548 Ketopantoate hydroxymethyltransferase M1S50_16215 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M1S50_16220 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S50_16220 PF01743 Poly A polymerase head domain M1S50_16220 PF12626 Polymerase A arginine-rich C-terminus M1S50_16230 PF03819 MazG nucleotide pyrophosphohydrolase domain M1S50_16240 PF13291 ACT domain M1S50_16240 PF02824 TGS domain M1S50_16240 PF04607 Region found in RelA / SpoT proteins M1S50_16245 PF05958 tRNA (Uracil-5-)-methyltransferase M1S50_16255 PF00291 Pyridoxal-phosphate dependent enzyme M1S50_16260 PF00672 HAMP domain M1S50_16260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_16260 PF00512 His Kinase A (phospho-acceptor) domain M1S50_16260 PF00072 Response regulator receiver domain M1S50_16260 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M1S50_16260 PF01627 Hpt domain M1S50_16265 PF00378 Enoyl-CoA hydratase/isomerase M1S50_16270 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S50_16270 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S50_16275 PF01261 Xylose isomerase-like TIM barrel M1S50_16285 PF00106 short chain dehydrogenase M1S50_16290 PF02233 NAD(P) transhydrogenase beta subunit M1S50_16295 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M1S50_16300 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M1S50_16300 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M1S50_16305 PF00892 EamA-like transporter family M1S50_16315 PF07690 Major Facilitator Superfamily M1S50_16320 PF01207 Dihydrouridine synthase (Dus) M1S50_16330 PF03466 LysR substrate binding domain M1S50_16330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_16340 PF00899 ThiF family M1S50_16350 PF00330 Aconitase family (aconitate hydratase) M1S50_16350 PF00694 Aconitase C-terminal domain M1S50_16355 PF01026 TatD related DNase M1S50_16370 PF00009 Elongation factor Tu GTP binding domain M1S50_16370 PF03144 Elongation factor Tu domain 2 M1S50_16370 PF16658 Class II release factor RF3, C-terminal domain M1S50_16390 PF03707 Bacterial signalling protein N terminal repeat M1S50_16390 PF00990 Diguanylate cyclase, GGDEF domain M1S50_16390 PF00563 EAL domain M1S50_16395 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M1S50_16395 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M1S50_16400 PF10369 Small subunit of acetolactate synthase M1S50_16405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S50_16405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S50_16405 PF00205 Thiamine pyrophosphate enzyme, central domain M1S50_16415 PF08264 Anticodon-binding domain of tRNA M1S50_16415 PF00133 tRNA synthetases class I (I, L, M and V) M1S50_16415 PF09334 tRNA synthetases class I (M) M1S50_16415 PF13603 Leucyl-tRNA synthetase, Domain 2 M1S50_16430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S50_16435 PF12704 MacB-like periplasmic core domain M1S50_16435 PF00005 ABC transporter M1S50_16435 PF02687 FtsX-like permease family M1S50_16440 PF02321 Outer membrane efflux protein M1S50_16455 PF00929 Exonuclease M1S50_16460 PF03193 RsgA GTPase M1S50_16470 PF00462 Glutaredoxin M1S50_16475 PF02556 Preprotein translocase subunit SecB M1S50_16490 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S50_16490 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S50_16505 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S50_16505 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S50_16515 PF04820 Tryptophan halogenase M1S50_16535 PF00221 Aromatic amino acid lyase M1S50_16550 PF13193 AMP-binding enzyme C-terminal domain M1S50_16550 PF00501 AMP-binding enzyme M1S50_16560 PF00550 Phosphopantetheine attachment site M1S50_16565 PF00550 Phosphopantetheine attachment site M1S50_16580 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M1S50_16580 PF01926 50S ribosome-binding GTPase M1S50_16585 PF13360 PQQ-like domain M1S50_16595 PF03129 Anticodon binding domain M1S50_16595 PF13393 Histidyl-tRNA synthetase M1S50_16600 PF04551 GcpE protein M1S50_16605 PF13464 Domain of unknown function (DUF4115) M1S50_16615 PF04055 Radical SAM superfamily M1S50_16620 PF00334 Nucleoside diphosphate kinase M1S50_16625 PF04384 Iron-sulphur cluster assembly M1S50_16630 PF01569 PAP2 superfamily M1S50_16635 PF13439 Glycosyltransferase Family 4 M1S50_16635 PF00534 Glycosyl transferases group 1 M1S50_16640 PF11818 C-terminal domain of tail specific protease (DUF3340) M1S50_16640 PF00595 PDZ domain M1S50_16640 PF03572 Peptidase family S41 M1S50_16640 PF17804 Tail specific protease N-terminal domain M1S50_16645 PF00933 Glycosyl hydrolase family 3 N terminal domain M1S50_16655 PF00561 alpha/beta hydrolase fold M1S50_16660 PF00171 Aldehyde dehydrogenase family M1S50_16665 PF00171 Aldehyde dehydrogenase family M1S50_16670 PF01202 Shikimate kinase M1S50_16675 PF02447 GntP family permease M1S50_16680 PF01081 KDPG and KHG aldolase M1S50_16685 PF00920 Dehydratase family M1S50_16690 PF00871 Acetokinase family M1S50_16695 PF01515 Phosphate acetyl/butaryl transferase M1S50_16695 PF07085 DRTGG domain M1S50_16700 PF05681 Fumarate hydratase (Fumerase) M1S50_16700 PF05683 Fumarase C-terminus M1S50_16715 PF07724 AAA domain (Cdc48 subfamily) M1S50_16715 PF10431 C-terminal, D2-small domain, of ClpB protein M1S50_16715 PF06689 ClpX C4-type zinc finger M1S50_16720 PF00574 Clp protease M1S50_16725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S50_16725 PF05698 Bacterial trigger factor protein (TF) C-terminus M1S50_16725 PF05697 Bacterial trigger factor protein (TF) M1S50_16730 PF07715 TonB-dependent Receptor Plug Domain M1S50_16730 PF00593 TonB dependent receptor M1S50_16735 PF13640 2OG-Fe(II) oxygenase superfamily M1S50_16735 PF18331 PKHD-type hydroxylase C-terminal domain M1S50_16740 PF00682 HMGL-like M1S50_16740 PF08502 LeuA allosteric (dimerisation) domain M1S50_16745 PF00561 alpha/beta hydrolase fold M1S50_16750 PF00561 alpha/beta hydrolase fold M1S50_16750 PF07021 Methionine biosynthesis protein MetW M1S50_16760 PF01725 Ham1 family M1S50_16770 PF02416 mttA/Hcf106 family M1S50_16775 PF02416 mttA/Hcf106 family M1S50_16780 PF00902 Sec-independent protein translocase protein (TatC) M1S50_16800 PF01790 Prolipoprotein diacylglyceryl transferase M1S50_16815 PF00303 Thymidylate synthase M1S50_16820 PF00186 Dihydrofolate reductase M1S50_16830 PF01625 Peptide methionine sulfoxide reductase M1S50_16840 PF01618 MotA/TolQ/ExbB proton channel family M1S50_16850 PF01842 ACT domain M1S50_16850 PF00551 Formyl transferase M1S50_16860 PF00171 Aldehyde dehydrogenase family M1S50_16865 PF00830 Ribosomal L28 family M1S50_16870 PF00471 Ribosomal protein L33 M1S50_16875 PF00999 Sodium/hydrogen exchanger family M1S50_16875 PF02254 TrkA-N domain M1S50_16895 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) M1S50_16900 PF00580 UvrD/REP helicase N-terminal domain M1S50_16900 PF13361 UvrD-like helicase C-terminal domain M1S50_16915 PF01751 Toprim domain M1S50_16915 PF01396 Topoisomerase DNA binding C4 zinc finger M1S50_16915 PF08272 Topoisomerase I zinc-ribbon-like M1S50_16915 PF01131 DNA topoisomerase M1S50_16925 PF01638 HxlR-like helix-turn-helix M1S50_16930 PF08240 Alcohol dehydrogenase GroES-like domain M1S50_16930 PF00107 Zinc-binding dehydrogenase M1S50_16935 PF04102 SlyX M1S50_16940 PF16326 ABC transporter C-terminal domain M1S50_16940 PF12848 ABC transporter M1S50_16940 PF00005 ABC transporter M1S50_16945 PF01810 LysE type translocator M1S50_16950 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S50_16960 PF00375 Sodium:dicarboxylate symporter family M1S50_16970 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S50_16970 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S50_16990 PF01416 tRNA pseudouridine synthase M1S50_17000 PF01176 Translation initiation factor 1A / IF-1 M1S50_17015 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S50_17025 PF00694 Aconitase C-terminal domain M1S50_17030 PF00330 Aconitase family (aconitate hydratase) M1S50_17040 PF03466 LysR substrate binding domain M1S50_17040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_17060 PF00293 NUDIX domain M1S50_17065 PF05524 PEP-utilising enzyme, N-terminal M1S50_17065 PF00391 PEP-utilising enzyme, mobile domain M1S50_17065 PF02896 PEP-utilising enzyme, TIM barrel domain M1S50_17065 PF01590 GAF domain M1S50_17070 PF00141 Peroxidase M1S50_17075 PF12706 Beta-lactamase superfamily domain M1S50_17080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_17080 PF03466 LysR substrate binding domain M1S50_17090 PF02798 Glutathione S-transferase, N-terminal domain M1S50_17095 PF13280 WYL domain M1S50_17095 PF08279 HTH domain M1S50_17100 PF13419 Haloacid dehalogenase-like hydrolase M1S50_17105 PF00849 RNA pseudouridylate synthase M1S50_17105 PF01479 S4 domain M1S50_17110 PF12111 Polyribonucleotide phosphorylase C terminal M1S50_17110 PF10150 Ribonuclease E/G family M1S50_17110 PF00575 S1 RNA binding domain M1S50_17115 PF00501 AMP-binding enzyme M1S50_17115 PF13193 AMP-binding enzyme C-terminal domain M1S50_17130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_17130 PF03466 LysR substrate binding domain M1S50_17135 PF00106 short chain dehydrogenase M1S50_17140 PF04055 Radical SAM superfamily M1S50_17140 PF06969 HemN C-terminal domain M1S50_17150 PF01554 MatE M1S50_17155 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S50_17155 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_17155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_17160 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S50_17160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_17165 PF03109 ABC1 family M1S50_17170 PF01197 Ribosomal protein L31 M1S50_17185 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1S50_17205 PF03884 DNA gyrase inhibitor YacG M1S50_17210 PF00753 Metallo-beta-lactamase superfamily M1S50_17215 PF00762 Ferrochelatase M1S50_17225 PF01177 Asp/Glu/Hydantoin racemase M1S50_17240 PF01206 Sulfurtransferase TusA M1S50_17245 PF00571 CBS domain M1S50_17245 PF03471 Transporter associated domain M1S50_17250 PF00795 Carbon-nitrogen hydrolase M1S50_17255 PF01588 Putative tRNA binding domain M1S50_17265 PF08334 Type II secretion system (T2SS), protein G M1S50_17265 PF07963 Prokaryotic N-terminal methylation motif M1S50_17270 PF00482 Type II secretion system (T2SS), protein F M1S50_17275 PF00270 DEAD/DEAH box helicase M1S50_17275 PF00271 Helicase conserved C-terminal domain M1S50_17275 PF17764 3′ DNA-binding domain (3′BD) M1S50_17275 PF18074 Primosomal protein N C-terminal domain M1S50_17275 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M1S50_17280 PF02254 TrkA-N domain M1S50_17280 PF00999 Sodium/hydrogen exchanger family M1S50_17285 PF01430 Hsp33 protein M1S50_17295 PF00226 DnaJ domain M1S50_17295 PF01556 DnaJ C terminal domain M1S50_17305 PF01544 CorA-like Mg2+ transporter protein M1S50_17310 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M1S50_17310 PF01138 3' exoribonuclease family, domain 1 M1S50_17310 PF03725 3' exoribonuclease family, domain 2 M1S50_17310 PF00575 S1 RNA binding domain M1S50_17310 PF00013 KH domain M1S50_17315 PF00312 Ribosomal protein S15 M1S50_17320 PF00144 Beta-lactamase M1S50_17325 PF13538 UvrD-like helicase C-terminal domain M1S50_17330 PF12705 PD-(D/E)XK nuclease superfamily M1S50_17330 PF00580 UvrD/REP helicase N-terminal domain M1S50_17330 PF13361 UvrD-like helicase C-terminal domain M1S50_17335 PF17946 RecC C-terminal domain M1S50_17345 PF03976 Polyphosphate kinase 2 (PPK2) M1S50_17355 PF01209 ubiE/COQ5 methyltransferase family M1S50_17365 PF03109 ABC1 family M1S50_17370 PF01494 FAD binding domain M1S50_17375 PF01502 Phosphoribosyl-AMP cyclohydrolase M1S50_17390 PF13244 Domain of unknown function (DUF4040) M1S50_17390 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M1S50_17390 PF00361 Proton-conducting membrane transporter M1S50_17390 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S50_17395 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S50_17400 PF00361 Proton-conducting membrane transporter M1S50_17405 PF01899 Na+/H+ ion antiporter subunit M1S50_17410 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M1S50_17415 PF03334 Na+/H+ antiporter subunit M1S50_17420 PF02033 Ribosome-binding factor A M1S50_17425 PF04760 Translation initiation factor IF-2, N-terminal region M1S50_17425 PF08364 Bacterial translation initiation factor IF-2 associated region M1S50_17425 PF11987 Translation-initiation factor 2 M1S50_17425 PF00009 Elongation factor Tu GTP binding domain M1S50_17430 PF00575 S1 RNA binding domain M1S50_17430 PF13184 NusA-like KH domain M1S50_17430 PF08529 NusA N-terminal domain M1S50_17435 PF17384 RimP C-terminal SH3 domain M1S50_17435 PF02576 RimP N-terminal domain M1S50_17455 PF03840 Preprotein translocase SecG subunit M1S50_17460 PF00121 Triosephosphate isomerase M1S50_17465 PF00437 Type II/IV secretion system protein M1S50_17465 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S50_17470 PF00482 Type II secretion system (T2SS), protein F M1S50_17480 PF06750 Bacterial Peptidase A24 N-terminal domain M1S50_17480 PF01478 Type IV leader peptidase family M1S50_17485 PF01121 Dephospho-CoA kinase M1S50_17495 PF00588 SpoU rRNA Methylase family M1S50_17495 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S50_17500 PF06865 Pyrimidine/purine nucleoside phosphorylase M1S50_17510 PF02463 RecF/RecN/SMC N terminal domain M1S50_17515 PF02622 Uncharacterized ACR, COG1678 M1S50_17520 PF03652 Holliday junction resolvase M1S50_17525 PF13533 Biotin-lipoyl like M1S50_17550 PF02805 Metal binding domain of Ada M1S50_17550 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S50_17550 PF12833 Helix-turn-helix domain M1S50_17550 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S50_17555 PF01066 CDP-alcohol phosphatidyltransferase M1S50_17565 PF01541 GIY-YIG catalytic domain M1S50_17565 PF02151 UvrB/uvrC motif M1S50_17565 PF08459 UvrC Helix-hairpin-helix N-terminal M1S50_17585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S50_17585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S50_17585 PF00378 Enoyl-CoA hydratase/isomerase M1S50_17590 PF02803 Thiolase, C-terminal domain M1S50_17590 PF00108 Thiolase, N-terminal domain M1S50_17610 PF00376 MerR family regulatory protein M1S50_17610 PF09278 MerR, DNA binding M1S50_17620 PF01323 DSBA-like thioredoxin domain M1S50_17635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_17635 PF00183 Hsp90 protein M1S50_17650 PF13726 Na+-H+ antiporter family M1S50_17650 PF03553 Na+/H+ antiporter family M1S50_17655 PF00561 alpha/beta hydrolase fold M1S50_17675 PF04998 RNA polymerase Rpb1, domain 5 M1S50_17675 PF04997 RNA polymerase Rpb1, domain 1 M1S50_17675 PF05000 RNA polymerase Rpb1, domain 4 M1S50_17675 PF04983 RNA polymerase Rpb1, domain 3 M1S50_17675 PF00623 RNA polymerase Rpb1, domain 2 M1S50_17680 PF04563 RNA polymerase beta subunit M1S50_17680 PF04561 RNA polymerase Rpb2, domain 2 M1S50_17680 PF04565 RNA polymerase Rpb2, domain 3 M1S50_17680 PF10385 RNA polymerase beta subunit external 1 domain M1S50_17680 PF00562 RNA polymerase Rpb2, domain 6 M1S50_17680 PF04560 RNA polymerase Rpb2, domain 7 M1S50_17685 PF16320 Ribosomal protein L7/L12 dimerisation domain M1S50_17685 PF00542 Ribosomal protein L7/L12 C-terminal domain M1S50_17690 PF00466 Ribosomal protein L10 M1S50_17695 PF00687 Ribosomal protein L1p/L10e family M1S50_17700 PF00298 Ribosomal protein L11, RNA binding domain M1S50_17700 PF03946 Ribosomal protein L11, N-terminal domain M1S50_17705 PF00467 KOW motif M1S50_17705 PF02357 Transcription termination factor nusG M1S50_17710 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M1S50_17720 PF03144 Elongation factor Tu domain 2 M1S50_17720 PF00009 Elongation factor Tu GTP binding domain M1S50_17720 PF03143 Elongation factor Tu C-terminal domain M1S50_17745 PF04715 Anthranilate synthase component I, N terminal region M1S50_17745 PF00425 chorismate binding enzyme M1S50_17750 PF13419 Haloacid dehalogenase-like hydrolase M1S50_17755 PF00498 FHA domain M1S50_17755 PF12401 Protein of unknown function (DUF2662) M1S50_17760 PF03958 Bacterial type II/III secretion system short domain M1S50_17760 PF00263 Bacterial type II and III secretion system protein M1S50_17775 PF00816 H-NS histone family M1S50_17800 PF03900 Porphobilinogen deaminase, C-terminal domain M1S50_17800 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M1S50_17805 PF04397 LytTr DNA-binding domain M1S50_17805 PF00072 Response regulator receiver domain M1S50_17810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_17810 PF06580 Histidine kinase M1S50_17810 PF07694 5TMR of 5TMR-LYT M1S50_17815 PF00206 Lyase M1S50_17815 PF14698 Argininosuccinate lyase C-terminal M1S50_17820 PF04362 Bacterial Fe(2+) trafficking M1S50_17825 PF01895 PhoU domain M1S50_17830 PF02321 Outer membrane efflux protein M1S50_17835 PF00892 EamA-like transporter family M1S50_17850 PF13667 ThiC-associated domain M1S50_17850 PF01964 Radical SAM ThiC family M1S50_17855 PF00293 NUDIX domain M1S50_17860 PF00149 Calcineurin-like phosphoesterase M1S50_17865 PF01258 Prokaryotic dksA/traR C4-type zinc finger M1S50_17870 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S50_17875 PF01098 Cell cycle protein M1S50_17880 PF02875 Mur ligase family, glutamate ligase domain M1S50_17880 PF08245 Mur ligase middle domain M1S50_17890 PF07664 Ferrous iron transport protein B C terminus M1S50_17890 PF02421 Ferrous iron transport protein B M1S50_17890 PF07670 Nucleoside recognition M1S50_17900 PF00589 Phage integrase family M1S50_17900 PF02899 Phage integrase, N-terminal SAM-like domain M1S50_17905 PF13098 Thioredoxin-like domain M1S50_17905 PF10411 Disulfide bond isomerase protein N-terminus M1S50_17910 PF01842 ACT domain M1S50_17910 PF00742 Homoserine dehydrogenase M1S50_17910 PF03447 Homoserine dehydrogenase, NAD binding domain M1S50_17915 PF00291 Pyridoxal-phosphate dependent enzyme M1S50_17920 PF00768 D-alanyl-D-alanine carboxypeptidase M1S50_17925 PF00196 Bacterial regulatory proteins, luxR family M1S50_17925 PF00072 Response regulator receiver domain M1S50_17930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S50_17930 PF00512 His Kinase A (phospho-acceptor) domain M1S50_17935 PF02954 Bacterial regulatory protein, Fis family M1S50_17935 PF00072 Response regulator receiver domain M1S50_17935 PF00158 Sigma-54 interaction domain M1S50_17940 PF03572 Peptidase family S41 M1S50_17940 PF00595 PDZ domain M1S50_17945 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M1S50_17945 PF01676 Metalloenzyme superfamily M1S50_17950 PF03739 Lipopolysaccharide export system permease LptF/LptG M1S50_17960 PF00883 Cytosol aminopeptidase family, catalytic domain M1S50_17960 PF02789 Cytosol aminopeptidase family, N-terminal domain M1S50_17980 PF00677 Lumazine binding domain M1S50_17990 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S50_17990 PF01872 RibD C-terminal domain M1S50_17995 PF03477 ATP cone domain M1S50_18000 PF00909 Ammonium Transporter Family M1S50_18005 PF00543 Nitrogen regulatory protein P-II M1S50_18025 PF01636 Phosphotransferase enzyme family M1S50_18030 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M1S50_18050 PF02909 Tetracyclin repressor-like, C-terminal domain M1S50_18050 PF00440 Bacterial regulatory proteins, tetR family M1S50_18055 PF07690 Major Facilitator Superfamily M1S50_18065 PF01740 STAS domain M1S50_18065 PF00916 Sulfate permease family M1S50_18070 PF00582 Universal stress protein family M1S50_18110 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S50_18110 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S50_18110 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S50_18110 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S50_18115 PF00809 Pterin binding enzyme M1S50_18130 PF00665 Integrase core domain M1S50_18155 PF02899 Phage integrase, N-terminal SAM-like domain M1S50_18155 PF00589 Phage integrase family M1S50_18185 PF01740 STAS domain M1S50_18185 PF00916 Sulfate permease family M1S50_18190 PF00582 Universal stress protein family M1S50_18210 PF00665 Integrase core domain M1S50_18225 PF00155 Aminotransferase class I and II M1S50_18225 PF00392 Bacterial regulatory proteins, gntR family M1S50_18235 PF00701 Dihydrodipicolinate synthetase family M1S50_18250 PF03573 outer membrane porin, OprD family M1S50_18255 PF00719 Inorganic pyrophosphatase M1S50_18270 PF13193 AMP-binding enzyme C-terminal domain M1S50_18270 PF00501 AMP-binding enzyme M1S50_18275 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S50_18275 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S50_18280 PF07690 Major Facilitator Superfamily M1S50_18285 PF03458 UPF0126 domain M1S50_18290 PF02810 SEC-C motif M1S50_18295 PF03741 Integral membrane protein TerC family M1S50_18295 PF03471 Transporter associated domain M1S50_18300 PF03641 Possible lysine decarboxylase M1S50_18305 PF07690 Major Facilitator Superfamily M1S50_18315 PF00817 impB/mucB/samB family M1S50_18315 PF11799 impB/mucB/samB family C-terminal domain M1S50_18315 PF11798 IMS family HHH motif M1S50_18335 PF11842 Domain of unknown function (DUF3362) M1S50_18335 PF04055 Radical SAM superfamily M1S50_18335 PF08497 Radical SAM N-terminal M1S50_18355 PF03358 NADPH-dependent FMN reductase M1S50_18365 PF00291 Pyridoxal-phosphate dependent enzyme M1S50_18425 PF01327 Polypeptide deformylase M1S50_18435 PF17782 DprA winged helix domain M1S50_18435 PF02481 DNA recombination-mediator protein A M1S50_18440 PF01300 Telomere recombination M1S50_18445 PF00892 EamA-like transporter family M1S50_18450 PF00440 Bacterial regulatory proteins, tetR family M1S50_18455 PF07690 Major Facilitator Superfamily M1S50_18465 PF00255 Glutathione peroxidase M1S50_18475 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M1S50_18480 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S50_18480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S50_18485 PF00231 ATP synthase M1S50_18490 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S50_18490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S50_18490 PF00306 ATP synthase alpha/beta chain, C terminal domain M1S50_18495 PF00213 ATP synthase delta (OSCP) subunit M1S50_18500 PF00430 ATP synthase B/B' CF(0) M1S50_18505 PF00137 ATP synthase subunit C M1S50_18510 PF00119 ATP synthase A chain M1S50_18530 PF00005 ABC transporter M1S50_18535 PF00950 ABC 3 transport family M1S50_18540 PF01810 LysE type translocator M1S50_18545 PF04261 Dyp-type peroxidase family M1S50_18555 PF00390 Malic enzyme, N-terminal domain M1S50_18555 PF03949 Malic enzyme, NAD binding domain M1S50_18560 PF00750 tRNA synthetases class I (R) M1S50_18560 PF03485 Arginyl tRNA synthetase N terminal domain M1S50_18560 PF05746 DALR anticodon binding domain M1S50_18580 PF02678 Pirin M1S50_18580 PF05726 Pirin C-terminal cupin domain M1S50_18590 PF03551 Transcriptional regulator PadR-like family M1S50_18595 PF13427 Domain of unknown function (DUF4111) M1S50_18595 PF01909 Nucleotidyltransferase domain M1S50_18600 PF00117 Glutamine amidotransferase class-I M1S50_18600 PF00958 GMP synthase C terminal domain M1S50_18600 PF02540 NAD synthase M1S50_18605 PF04286 Protein of unknown function (DUF445) M1S50_18610 PF07681 DoxX M1S50_18615 PF09335 SNARE associated Golgi protein M1S50_18630 PF13614 AAA domain M1S50_18640 PF01722 BolA-like protein M1S50_18655 PF01648 4'-phosphopantetheinyl transferase superfamily M1S50_18660 PF12697 Alpha/beta hydrolase family M1S50_18680 PF16197 Ketoacyl-synthetase C-terminal extension M1S50_18680 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S50_18680 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S50_18680 PF00975 Thioesterase domain M1S50_18680 PF14765 Polyketide synthase dehydratase M1S50_18680 PF08242 Methyltransferase domain M1S50_18680 PF00550 Phosphopantetheine attachment site M1S50_18685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_18685 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_18685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_18690 PF00501 AMP-binding enzyme M1S50_18695 PF03472 Autoinducer binding domain M1S50_18695 PF00196 Bacterial regulatory proteins, luxR family M1S50_18705 PF00765 Autoinducer synthase M1S50_18710 PF07690 Major Facilitator Superfamily M1S50_18710 PF00083 Sugar (and other) transporter M1S50_18715 PF00378 Enoyl-CoA hydratase/isomerase M1S50_18720 PF00378 Enoyl-CoA hydratase/isomerase M1S50_18725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S50_18725 PF02770 Acyl-CoA dehydrogenase, middle domain M1S50_18725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S50_18730 PF13193 AMP-binding enzyme C-terminal domain M1S50_18730 PF00501 AMP-binding enzyme M1S50_18735 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S50_18735 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S50_18740 PF00171 Aldehyde dehydrogenase family M1S50_18750 PF00324 Amino acid permease M1S50_18755 PF00324 Amino acid permease M1S50_18760 PF01042 Endoribonuclease L-PSP M1S50_18765 PF00842 Alanine racemase, C-terminal domain M1S50_18765 PF01168 Alanine racemase, N-terminal domain M1S50_18770 PF01266 FAD dependent oxidoreductase M1S50_18775 PF01037 Lrp/AsnC ligand binding domain M1S50_18785 PF00593 TonB dependent receptor M1S50_18785 PF07715 TonB-dependent Receptor Plug Domain M1S50_18800 PF00849 RNA pseudouridylate synthase M1S50_18815 PF00440 Bacterial regulatory proteins, tetR family M1S50_18815 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S50_18825 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S50_18825 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S50_18860 PF00694 Aconitase C-terminal domain M1S50_18860 PF00330 Aconitase family (aconitate hydratase) M1S50_18865 PF00285 Citrate synthase, C-terminal domain M1S50_18875 PF07729 FCD domain M1S50_18875 PF00392 Bacterial regulatory proteins, gntR family M1S50_18885 PF00155 Aminotransferase class I and II M1S50_18890 PF01565 FAD binding domain M1S50_18890 PF09330 D-lactate dehydrogenase, membrane binding M1S50_18895 PF01070 FMN-dependent dehydrogenase M1S50_18900 PF07729 FCD domain M1S50_18900 PF00392 Bacterial regulatory proteins, gntR family M1S50_18905 PF02652 L-lactate permease M1S50_18910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S50_18910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S50_18910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S50_18910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S50_18915 PF16363 GDP-mannose 4,6 dehydratase M1S50_18920 PF00342 Phosphoglucose isomerase M1S50_18925 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S50_18925 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S50_18925 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S50_18930 PF00483 Nucleotidyl transferase M1S50_18935 PF02397 Bacterial sugar transferase M1S50_18940 PF00535 Glycosyl transferase family 2 M1S50_18970 PF08666 SAF domain M1S50_18970 PF03102 NeuB family M1S50_18985 PF02348 Cytidylyltransferase M1S50_18990 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M1S50_18995 PF02719 Polysaccharide biosynthesis protein M1S50_19000 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S50_19000 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S50_19000 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S50_19005 PF10531 SLBB domain M1S50_19005 PF02563 Polysaccharide biosynthesis/export protein M1S50_19005 PF18412 Outer-membrane lipoprotein Wza C-terminal domain M1S50_19010 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S50_19015 PF13807 G-rich domain on putative tyrosine kinase M1S50_19015 PF02706 Chain length determinant protein M1S50_19015 PF13614 AAA domain M1S50_19020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S50_19020 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S50_19025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S50_19025 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S50_19030 PF03023 Lipid II flippase MurJ M1S50_19035 PF01510 N-acetylmuramoyl-L-alanine amidase M1S50_19040 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M1S50_19040 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M1S50_19050 PF05506 Domain of unknown function (DUF756) M1S50_19050 PF04185 Phosphoesterase family M1S50_19060 PF01138 3' exoribonuclease family, domain 1 M1S50_19060 PF03725 3' exoribonuclease family, domain 2 M1S50_19065 PF00487 Fatty acid desaturase M1S50_19070 PF00175 Oxidoreductase NAD-binding domain M1S50_19075 PF00440 Bacterial regulatory proteins, tetR family M1S50_19080 PF08360 QacR-like protein, C-terminal region M1S50_19080 PF00440 Bacterial regulatory proteins, tetR family M1S50_19085 PF01323 DSBA-like thioredoxin domain M1S50_19095 PF13419 Haloacid dehalogenase-like hydrolase M1S50_19100 PF00106 short chain dehydrogenase M1S50_19115 PF00696 Amino acid kinase family M1S50_19115 PF00583 Acetyltransferase (GNAT) family M1S50_19120 PF09084 NMT1/THI5 like M1S50_19125 PF09084 NMT1/THI5 like M1S50_19130 PF00296 Luciferase-like monooxygenase M1S50_19135 PF00528 Binding-protein-dependent transport system inner membrane component M1S50_19140 PF00005 ABC transporter M1S50_19145 PF08362 YcdC-like protein, C-terminal region M1S50_19145 PF00440 Bacterial regulatory proteins, tetR family M1S50_19150 PF01048 Phosphorylase superfamily M1S50_19160 PF01687 Riboflavin kinase M1S50_19160 PF06574 FAD synthetase M1S50_19165 PF00133 tRNA synthetases class I (I, L, M and V) M1S50_19165 PF06827 Zinc finger found in FPG and IleRS M1S50_19165 PF08264 Anticodon-binding domain of tRNA M1S50_19170 PF01252 Signal peptidase (SPase) II M1S50_19175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S50_19215 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S50_19220 PF07859 alpha/beta hydrolase fold M1S50_19240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S50_19240 PF03466 LysR substrate binding domain M1S50_19245 PF01025 GrpE M1S50_19250 PF00012 Hsp70 protein M1S50_19270 PF13406 Transglycosylase SLT domain M1S50_19275 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M1S50_19275 PF02222 ATP-grasp domain M1S50_19280 PF00731 AIR carboxylase M1S50_19290 PF01225 Mur ligase family, catalytic domain M1S50_19290 PF08245 Mur ligase middle domain M1S50_19290 PF02875 Mur ligase family, glutamate ligase domain M1S50_19300 PF01569 PAP2 superfamily M1S50_19305 PF03741 Integral membrane protein TerC family M1S50_19315 PF03738 Glutathionylspermidine synthase preATP-grasp M1S50_19320 PF00355 Rieske [2Fe-2S] domain M1S50_19325 PF01979 Amidohydrolase family M1S50_19330 PF00156 Phosphoribosyl transferase domain M1S50_19340 PF10411 Disulfide bond isomerase protein N-terminus M1S50_19340 PF13098 Thioredoxin-like domain M1S50_19345 PF01545 Cation efflux family M1S50_19345 PF16916 Dimerisation domain of Zinc Transporter M1S50_19350 PF02583 Metal-sensitive transcriptional repressor M1S50_19355 PF01926 50S ribosome-binding GTPase M1S50_19355 PF12631 MnmE helical domain M1S50_19355 PF10396 GTP-binding protein TrmE N-terminus M1S50_19360 PF02096 60Kd inner membrane protein M1S50_19360 PF14849 YidC periplasmic domain M1S50_19365 PF01809 Putative membrane protein insertion efficiency factor M1S50_19370 PF00825 Ribonuclease P M1S50_19375 PF00468 Ribosomal protein L34 M1S50_19400 PF01807 CHC2 zinc finger M1S50_19400 PF08275 DNA primase catalytic core, N-terminal domain M1S50_19400 PF10410 DnaB-helicase binding domain of primase M1S50_19430 PF00625 Guanylate kinase M1S50_19445 PF07015 VirC1 protein M1S50_19455 PF00589 Phage integrase family M1S50_19455 PF02899 Phage integrase, N-terminal SAM-like domain M1S50_19490 PF02811 PHP domain M1S50_19490 PF14579 Helix-hairpin-helix motif M1S50_19490 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S50_19490 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S50_19500 PF02811 PHP domain M1S50_19500 PF14579 Helix-hairpin-helix motif M1S50_19500 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S50_19500 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S50_19515 PF01612 3'-5' exonuclease M1S50_19515 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S50_19515 PF00476 DNA polymerase family A M1S50_19515 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S50_19520 PF00154 recA bacterial DNA recombination protein M1S50_19520 PF03161 LAGLIDADG DNA endonuclease family M1S50_19550 PF02463 RecF/RecN/SMC N terminal domain M1S50_19550 PF06470 SMC proteins Flexible Hinge Domain M1S50_19570 PF02867 Ribonucleotide reductase, barrel domain M1S50_19570 PF03477 ATP cone domain M1S50_19570 PF00317 Ribonucleotide reductase, all-alpha domain M1S50_19575 PF00268 Ribonucleotide reductase, small chain M1S50_19615 PF00929 Exonuclease M1S50_19650 PF13737 Transposase DDE domain M1S50_19660 PF00440 Bacterial regulatory proteins, tetR family M1S50_19660 PF16925 Tetracyclin repressor-like, C-terminal domain M1S50_19670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S50_19680 PF00465 Iron-containing alcohol dehydrogenase M1S50_19695 PF00756 Putative esterase M1S50_19700 PF08240 Alcohol dehydrogenase GroES-like domain M1S50_19700 PF00107 Zinc-binding dehydrogenase M1S50_19705 PF02583 Metal-sensitive transcriptional repressor M1S50_19720 PF00107 Zinc-binding dehydrogenase M1S50_19720 PF08240 Alcohol dehydrogenase GroES-like domain M1S50_19720 PF13823 Alcohol dehydrogenase GroES-associated M1S50_19785 PF02216 B domain M1S50_19785 PF00746 LPXTG cell wall anchor motif M1S50_19785 PF01476 LysM domain M1S50_19785 PF03373 Octapeptide repeat M1S50_19785 PF04650 YSIRK type signal peptide M1S50_19800 PF02559 CarD-like/TRCF domain M1S50_19800 PF00270 DEAD/DEAH box helicase M1S50_19800 PF00271 Helicase conserved C-terminal domain M1S50_19800 PF03461 TRCF domain M1S50_19800 PF17757 UvrB interaction domain M1S50_19820 PF00005 ABC transporter M1S50_19820 PF09383 NIL domain