locus-tag class description M1S41_00005 PF00308 Bacterial dnaA protein M1S41_00005 PF08299 Bacterial dnaA protein helix-turn-helix M1S41_00005 PF11638 DnaA N-terminal domain M1S41_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S41_00010 PF02767 DNA polymerase III beta subunit, central domain M1S41_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S41_00015 PF02463 RecF/RecN/SMC N terminal domain M1S41_00020 PF00204 DNA gyrase B M1S41_00020 PF00986 DNA gyrase B subunit, carboxyl terminus M1S41_00020 PF18053 DNA gyrase B subunit insert domain M1S41_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_00020 PF01751 Toprim domain M1S41_00030 PF09335 SNARE associated Golgi protein M1S41_00035 PF12848 ABC transporter M1S41_00035 PF00005 ABC transporter M1S41_00055 PF01521 Iron-sulphur cluster biosynthesis M1S41_00060 PF00561 alpha/beta hydrolase fold M1S41_00065 PF03702 Anhydro-N-acetylmuramic acid kinase M1S41_00070 PF00579 tRNA synthetases class I (W and Y) M1S41_00110 PF00209 Sodium:neurotransmitter symporter family M1S41_00120 PF01189 16S rRNA methyltransferase RsmB/F M1S41_00120 PF01029 NusB family M1S41_00125 PF02911 Formyl transferase, C-terminal domain M1S41_00125 PF00551 Formyl transferase M1S41_00130 PF00920 Dehydratase family M1S41_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_00145 PF03466 LysR substrate binding domain M1S41_00150 PF00860 Permease family M1S41_00155 PF00311 Phosphoenolpyruvate carboxylase M1S41_00160 PF00440 Bacterial regulatory proteins, tetR family M1S41_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S41_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S41_00180 PF00226 DnaJ domain M1S41_00180 PF01556 DnaJ C terminal domain M1S41_00180 PF00684 DnaJ central domain M1S41_00190 PF05173 Dihydrodipicolinate reductase, C-terminus M1S41_00190 PF01113 Dihydrodipicolinate reductase, N-terminus M1S41_00200 PF07690 Major Facilitator Superfamily M1S41_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_00210 PF03466 LysR substrate binding domain M1S41_00225 PF00392 Bacterial regulatory proteins, gntR family M1S41_00225 PF00155 Aminotransferase class I and II M1S41_00230 PF00107 Zinc-binding dehydrogenase M1S41_00230 PF08240 Alcohol dehydrogenase GroES-like domain M1S41_00235 PF03352 Methyladenine glycosylase M1S41_00250 PF00633 Helix-hairpin-helix motif M1S41_00250 PF10576 Iron-sulfur binding domain of endonuclease III M1S41_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S41_00250 PF14815 NUDIX domain M1S41_00265 PF07043 Protein of unknown function (DUF1328) M1S41_00270 PF03692 Putative zinc- or iron-chelating domain M1S41_00275 PF07995 Glucose / Sorbosone dehydrogenase M1S41_00280 PF16193 AAA C-terminal domain M1S41_00280 PF00004 ATPase family associated with various cellular activities (AAA) M1S41_00280 PF12002 MgsA AAA+ ATPase C terminal M1S41_00285 PF01226 Formate/nitrite transporter M1S41_00295 PF01259 SAICAR synthetase M1S41_00305 PF00701 Dihydrodipicolinate synthetase family M1S41_00310 PF00857 Isochorismatase family M1S41_00315 PF01758 Sodium Bile acid symporter family M1S41_00320 PF01554 MatE M1S41_00325 PF04463 Protein of unknown function (DUF523) M1S41_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S41_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S41_00345 PF14497 Glutathione S-transferase, C-terminal domain M1S41_00345 PF02798 Glutathione S-transferase, N-terminal domain M1S41_00355 PF00324 Amino acid permease M1S41_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S41_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S41_00375 PF07702 UTRA domain M1S41_00375 PF00392 Bacterial regulatory proteins, gntR family M1S41_00380 PF05962 HutD M1S41_00385 PF17391 Urocanase N-terminal domain M1S41_00385 PF17392 Urocanase C-terminal domain M1S41_00385 PF01175 Urocanase Rossmann-like domain M1S41_00390 PF00221 Aromatic amino acid lyase M1S41_00395 PF00324 Amino acid permease M1S41_00400 PF01979 Amidohydrolase family M1S41_00405 PF00491 Arginase family M1S41_00420 PF01177 Asp/Glu/Hydantoin racemase M1S41_00425 PF01380 SIS domain M1S41_00430 PF14602 Hexapeptide repeat of succinyl-transferase M1S41_00430 PF12804 MobA-like NTP transferase domain M1S41_00430 PF00132 Bacterial transferase hexapeptide (six repeats) M1S41_00435 PF04608 Phosphatidylglycerophosphatase A M1S41_00440 PF00586 AIR synthase related protein, N-terminal domain M1S41_00440 PF02769 AIR synthase related protein, C-terminal domain M1S41_00445 PF01029 NusB family M1S41_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase M1S41_00455 PF00925 GTP cyclohydrolase II M1S41_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S41_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase M1S41_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M1S41_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S41_00490 PF00581 Rhodanese-like domain M1S41_00495 PF02666 Phosphatidylserine decarboxylase M1S41_00500 PF03069 Acetamidase/Formamidase family M1S41_00520 PF00512 His Kinase A (phospho-acceptor) domain M1S41_00520 PF00989 PAS fold M1S41_00520 PF11808 Phosphate regulon sensor protein PhoR M1S41_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_00525 PF00486 Transcriptional regulatory protein, C terminal M1S41_00525 PF00072 Response regulator receiver domain M1S41_00535 PF00106 short chain dehydrogenase M1S41_00540 PF01554 MatE M1S41_00545 PF00155 Aminotransferase class I and II M1S41_00550 PF04286 Protein of unknown function (DUF445) M1S41_00565 PF04262 Glutamate-cysteine ligase M1S41_00570 PF02600 Disulfide bond formation protein DsbB M1S41_00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S41_00575 PF13296 Putative type VI secretion system Rhs element Vgr M1S41_00575 PF04717 Type VI secretion system, phage-baseplate injector M1S41_00580 PF00877 NlpC/P60 family M1S41_00580 PF01476 LysM domain M1S41_00595 PF05728 Uncharacterised protein family (UPF0227) M1S41_00600 PF01751 Toprim domain M1S41_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_00600 PF00986 DNA gyrase B subunit, carboxyl terminus M1S41_00600 PF00204 DNA gyrase B M1S41_00605 PF00106 short chain dehydrogenase M1S41_00610 PF04115 Ureidoglycolate lyase M1S41_00615 PF03561 Allantoicase repeat M1S41_00620 PF01494 FAD binding domain M1S41_00630 PF00860 Permease family M1S41_00635 PF00576 HIUase/Transthyretin family M1S41_00665 PF02683 Cytochrome C biogenesis protein transmembrane region M1S41_00665 PF11412 Disulphide bond corrector protein DsbC M1S41_00670 PF07694 5TMR of 5TMR-LYT M1S41_00670 PF00990 Diguanylate cyclase, GGDEF domain M1S41_00675 PF07859 alpha/beta hydrolase fold M1S41_00685 PF03960 ArsC family M1S41_00690 PF03372 Endonuclease/Exonuclease/phosphatase family M1S41_00695 PF00156 Phosphoribosyl transferase domain M1S41_00700 PF00593 TonB dependent receptor M1S41_00700 PF07715 TonB-dependent Receptor Plug Domain M1S41_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M1S41_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M1S41_00715 PF03033 Glycosyltransferase family 28 N-terminal domain M1S41_00715 PF04101 Glycosyltransferase family 28 C-terminal domain M1S41_00720 PF08245 Mur ligase middle domain M1S41_00720 PF02875 Mur ligase family, glutamate ligase domain M1S41_00720 PF01225 Mur ligase family, catalytic domain M1S41_00725 PF01820 D-ala D-ala ligase N-terminus M1S41_00725 PF07478 D-ala D-ala ligase C-terminus M1S41_00730 PF08478 POTRA domain, FtsQ-type M1S41_00730 PF03799 Cell division protein FtsQ M1S41_00735 PF02491 SHS2 domain inserted in FTSA M1S41_00740 PF00091 Tubulin/FtsZ family, GTPase domain M1S41_00740 PF12327 FtsZ family, C-terminal domain M1S41_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M1S41_00755 PF01551 Peptidase family M23 M1S41_00760 PF00456 Transketolase, thiamine diphosphate binding domain M1S41_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain M1S41_00765 PF00364 Biotin-requiring enzyme M1S41_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S41_00765 PF02817 e3 binding domain M1S41_00775 PF01169 Uncharacterized protein family UPF0016 M1S41_00795 PF00258 Flavodoxin M1S41_00795 PF01613 Flavin reductase like domain M1S41_00800 PF03692 Putative zinc- or iron-chelating domain M1S41_00805 PF00478 IMP dehydrogenase / GMP reductase domain M1S41_00805 PF00571 CBS domain M1S41_00810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S41_00810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S41_00810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S41_00810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S41_00815 PF01243 Pyridoxamine 5'-phosphate oxidase M1S41_00815 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M1S41_00820 PF17768 RecJ OB domain M1S41_00820 PF02272 DHHA1 domain M1S41_00820 PF01368 DHH family M1S41_00840 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S41_00845 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M1S41_00850 PF04452 RNA methyltransferase M1S41_00855 PF00924 Mechanosensitive ion channel M1S41_00865 PF13193 AMP-binding enzyme C-terminal domain M1S41_00865 PF00501 AMP-binding enzyme M1S41_00865 PF16177 Acetyl-coenzyme A synthetase N-terminus M1S41_00870 PF00857 Isochorismatase family M1S41_00875 PF01037 Lrp/AsnC ligand binding domain M1S41_00880 PF00872 Transposase, Mutator family M1S41_00885 PF00296 Luciferase-like monooxygenase M1S41_00890 PF03358 NADPH-dependent FMN reductase M1S41_00895 PF00072 Response regulator receiver domain M1S41_00895 PF00196 Bacterial regulatory proteins, luxR family M1S41_00905 PF00672 HAMP domain M1S41_00905 PF00512 His Kinase A (phospho-acceptor) domain M1S41_00905 PF01627 Hpt domain M1S41_00905 PF00072 Response regulator receiver domain M1S41_00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_00910 PF04341 Protein of unknown function, DUF485 M1S41_00915 PF00474 Sodium:solute symporter family M1S41_00925 PF02028 BCCT, betaine/carnitine/choline family transporter M1S41_00935 PF00990 Diguanylate cyclase, GGDEF domain M1S41_00945 PF17760 UvrA interaction domain M1S41_00945 PF00005 ABC transporter M1S41_00945 PF17755 UvrA DNA-binding domain M1S41_00950 PF16925 Tetracyclin repressor-like, C-terminal domain M1S41_00950 PF00440 Bacterial regulatory proteins, tetR family M1S41_00955 PF08240 Alcohol dehydrogenase GroES-like domain M1S41_00955 PF00107 Zinc-binding dehydrogenase M1S41_00965 PF06942 GlpM protein M1S41_00970 PF08543 Phosphomethylpyrimidine kinase M1S41_00970 PF03070 TENA/THI-4/PQQC family M1S41_00970 PF02581 Thiamine monophosphate synthase M1S41_00980 PF07690 Major Facilitator Superfamily M1S41_00985 PF00436 Single-strand binding protein family M1S41_00995 PF03591 AzlC protein M1S41_01005 PF00324 Amino acid permease M1S41_01010 PF00392 Bacterial regulatory proteins, gntR family M1S41_01010 PF00155 Aminotransferase class I and II M1S41_01015 PF00202 Aminotransferase class-III M1S41_01020 PF00171 Aldehyde dehydrogenase family M1S41_01025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_01030 PF00857 Isochorismatase family M1S41_01035 PF05726 Pirin C-terminal cupin domain M1S41_01035 PF02678 Pirin M1S41_01040 PF01593 Flavin containing amine oxidoreductase M1S41_01060 PF07690 Major Facilitator Superfamily M1S41_01065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_01065 PF03466 LysR substrate binding domain M1S41_01085 PF00248 Aldo/keto reductase family M1S41_01090 PF02311 AraC-like ligand binding domain M1S41_01090 PF12833 Helix-turn-helix domain M1S41_01120 PF01638 HxlR-like helix-turn-helix M1S41_01125 PF02525 Flavodoxin-like fold M1S41_01150 PF02705 K+ potassium transporter M1S41_01175 PF00230 Major intrinsic protein M1S41_01190 PF00977 Histidine biosynthesis protein M1S41_01195 PF01636 Phosphotransferase enzyme family M1S41_01210 PF03992 Antibiotic biosynthesis monooxygenase M1S41_01225 PF00977 Histidine biosynthesis protein M1S41_01240 PF00117 Glutamine amidotransferase class-I M1S41_01245 PF00475 Imidazoleglycerol-phosphate dehydratase M1S41_01265 PF00583 Acetyltransferase (GNAT) family M1S41_01270 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M1S41_01270 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M1S41_01280 PF00672 HAMP domain M1S41_01280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_01280 PF00512 His Kinase A (phospho-acceptor) domain M1S41_01285 PF00072 Response regulator receiver domain M1S41_01285 PF00486 Transcriptional regulatory protein, C terminal M1S41_01290 PF09371 Tex-like protein N-terminal domain M1S41_01290 PF16921 Tex protein YqgF-like domain M1S41_01290 PF17674 HHH domain M1S41_01290 PF00575 S1 RNA binding domain M1S41_01295 PF00916 Sulfate permease family M1S41_01295 PF01740 STAS domain M1S41_01300 PF00106 short chain dehydrogenase M1S41_01305 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S41_01310 PF12848 ABC transporter M1S41_01310 PF00005 ABC transporter M1S41_01335 PF04191 Phospholipid methyltransferase M1S41_01355 PF00529 HlyD membrane-fusion protein of T1SS M1S41_01355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S41_01360 PF00873 AcrB/AcrD/AcrF family M1S41_01365 PF01545 Cation efflux family M1S41_01395 PF00324 Amino acid permease M1S41_01410 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S41_01425 PF01795 MraW methylase family M1S41_01435 PF03717 Penicillin-binding Protein dimerisation domain M1S41_01435 PF00905 Penicillin binding protein transpeptidase domain M1S41_01440 PF01225 Mur ligase family, catalytic domain M1S41_01440 PF02875 Mur ligase family, glutamate ligase domain M1S41_01440 PF08245 Mur ligase middle domain M1S41_01445 PF02875 Mur ligase family, glutamate ligase domain M1S41_01445 PF01225 Mur ligase family, catalytic domain M1S41_01445 PF08245 Mur ligase middle domain M1S41_01450 PF00953 Glycosyl transferase family 4 M1S41_01460 PF13847 Methyltransferase domain M1S41_01465 PF00905 Penicillin binding protein transpeptidase domain M1S41_01465 PF00912 Transglycosylase M1S41_01465 PF17092 Penicillin-binding protein OB-like domain M1S41_01470 PF11104 Type IV pilus assembly protein PilM; M1S41_01475 PF05137 Fimbrial assembly protein (PilN) M1S41_01480 PF04350 Pilus assembly protein, PilO M1S41_01490 PF07660 Secretin and TonB N terminus short domain M1S41_01490 PF03958 Bacterial type II/III secretion system short domain M1S41_01490 PF00263 Bacterial type II and III secretion system protein M1S41_01490 PF11741 AMIN domain M1S41_01495 PF01202 Shikimate kinase M1S41_01500 PF01761 3-dehydroquinate synthase M1S41_01510 PF00310 Glutamine amidotransferases class-II M1S41_01510 PF04898 Glutamate synthase central domain M1S41_01510 PF01493 GXGXG motif M1S41_01510 PF01645 Conserved region in glutamate synthase M1S41_01515 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M1S41_01515 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_01525 PF04011 LemA family M1S41_01530 PF04536 TPM domain M1S41_01540 PF07963 Prokaryotic N-terminal methylation motif M1S41_01540 PF00114 Pilin (bacterial filament) M1S41_01550 PF11846 Virulence factor membrane-bound polymerase, C-terminal M1S41_01550 PF15864 Protein glycosylation ligase M1S41_01550 PF04932 O-Antigen ligase M1S41_01555 PF00210 Ferritin-like domain M1S41_01560 PF04324 BFD-like [2Fe-2S] binding domain M1S41_01565 PF01042 Endoribonuclease L-PSP M1S41_01570 PF13291 ACT domain M1S41_01570 PF02824 TGS domain M1S41_01570 PF04607 Region found in RelA / SpoT proteins M1S41_01580 PF01192 RNA polymerase Rpb6 M1S41_01585 PF00625 Guanylate kinase M1S41_01590 PF02401 LytB protein M1S41_01630 PF00886 Ribosomal protein S16 M1S41_01635 PF01782 RimM N-terminal domain M1S41_01635 PF05239 PRC-barrel domain M1S41_01640 PF01746 tRNA (Guanine-1)-methyltransferase M1S41_01645 PF01245 Ribosomal protein L19 M1S41_01650 PF00561 alpha/beta hydrolase fold M1S41_01655 PF03280 Proteobacterial lipase chaperone protein M1S41_01660 PF09157 Pseudouridine synthase II TruB, C-terminal M1S41_01660 PF01509 TruB family pseudouridylate synthase (N terminal domain) M1S41_01660 PF16198 tRNA pseudouridylate synthase B C-terminal domain M1S41_01665 PF01925 Sulfite exporter TauE/SafE M1S41_01675 PF00892 EamA-like transporter family M1S41_01680 PF00892 EamA-like transporter family M1S41_01685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S41_01685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S41_01690 PF02913 FAD linked oxidases, C-terminal domain M1S41_01690 PF01565 FAD binding domain M1S41_01700 PF03992 Antibiotic biosynthesis monooxygenase M1S41_01705 PF02525 Flavodoxin-like fold M1S41_01715 PF07690 Major Facilitator Superfamily M1S41_01720 PF12805 FUSC-like inner membrane protein yccS M1S41_01725 PF00080 Copper/zinc superoxide dismutase (SODC) M1S41_01730 PF01594 AI-2E family transporter M1S41_01735 PF13614 AAA domain M1S41_01765 PF00324 Amino acid permease M1S41_01770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S41_01770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S41_01775 PF00202 Aminotransferase class-III M1S41_01780 PF04958 Arginine N-succinyltransferase beta subunit M1S41_01785 PF00171 Aldehyde dehydrogenase family M1S41_01790 PF04996 Succinylarginine dihydrolase M1S41_01795 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M1S41_01810 PF05922 Peptidase inhibitor I9 M1S41_01810 PF00082 Subtilase family M1S41_01825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_01825 PF03466 LysR substrate binding domain M1S41_01830 PF00892 EamA-like transporter family M1S41_01840 PF02092 Glycyl-tRNA synthetase beta subunit M1S41_01840 PF05746 DALR anticodon binding domain M1S41_01845 PF02091 Glycyl-tRNA synthetase alpha subunit M1S41_01870 PF00571 CBS domain M1S41_01875 PF04024 PspC domain M1S41_01885 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_01885 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S41_01885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_01885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_01895 PF08501 Shikimate dehydrogenase substrate binding domain M1S41_01895 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M1S41_01895 PF01488 Shikimate / quinate 5-dehydrogenase M1S41_01900 PF01218 Coproporphyrinogen III oxidase M1S41_01905 PF00925 GTP cyclohydrolase II M1S41_01910 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M1S41_01910 PF02779 Transketolase, pyrimidine binding domain M1S41_01910 PF02780 Transketolase, C-terminal domain M1S41_01915 PF00459 Inositol monophosphatase family M1S41_01920 PF03880 DbpA RNA binding domain M1S41_01920 PF12343 Cold shock protein DEAD box A M1S41_01920 PF00270 DEAD/DEAH box helicase M1S41_01920 PF00271 Helicase conserved C-terminal domain M1S41_01930 PF00005 ABC transporter M1S41_01935 PF02405 Permease MlaE M1S41_01945 PF05494 MlaC protein M1S41_01955 PF01544 CorA-like Mg2+ transporter protein M1S41_01960 PF03641 Possible lysine decarboxylase M1S41_01965 PF00293 NUDIX domain M1S41_01970 PF00156 Phosphoribosyl transferase domain M1S41_01975 PF00270 DEAD/DEAH box helicase M1S41_01975 PF17191 RecG wedge domain M1S41_01975 PF00271 Helicase conserved C-terminal domain M1S41_01990 PF01553 Acyltransferase M1S41_02000 PF00375 Sodium:dicarboxylate symporter family M1S41_02010 PF01926 50S ribosome-binding GTPase M1S41_02015 PF02082 Transcriptional regulator M1S41_02020 PF00970 Oxidoreductase FAD-binding domain M1S41_02020 PF00042 Globin M1S41_02020 PF00175 Oxidoreductase NAD-binding domain M1S41_02025 PF05872 Bacterial protein of unknown function (DUF853) M1S41_02030 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S41_02035 PF00117 Glutamine amidotransferase class-I M1S41_02040 PF00338 Ribosomal protein S10p/S20e M1S41_02045 PF00297 Ribosomal protein L3 M1S41_02050 PF00573 Ribosomal protein L4/L1 family M1S41_02055 PF00276 Ribosomal protein L23 M1S41_02060 PF03947 Ribosomal Proteins L2, C-terminal domain M1S41_02060 PF00181 Ribosomal Proteins L2, RNA binding domain M1S41_02065 PF00203 Ribosomal protein S19 M1S41_02070 PF00237 Ribosomal protein L22p/L17e M1S41_02080 PF00252 Ribosomal protein L16p/L10e M1S41_02085 PF00831 Ribosomal L29 protein M1S41_02090 PF00366 Ribosomal protein S17 M1S41_02095 PF00238 Ribosomal protein L14p/L23e M1S41_02100 PF00467 KOW motif M1S41_02100 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M1S41_02105 PF00281 Ribosomal protein L5 M1S41_02105 PF00673 ribosomal L5P family C-terminus M1S41_02110 PF00253 Ribosomal protein S14p/S29e M1S41_02115 PF00410 Ribosomal protein S8 M1S41_02120 PF00347 Ribosomal protein L6 M1S41_02125 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M1S41_02130 PF00333 Ribosomal protein S5, N-terminal domain M1S41_02130 PF03719 Ribosomal protein S5, C-terminal domain M1S41_02135 PF00327 Ribosomal protein L30p/L7e M1S41_02140 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M1S41_02145 PF00344 SecY translocase M1S41_02150 PF00444 Ribosomal protein L36 M1S41_02155 PF00416 Ribosomal protein S13/S18 M1S41_02160 PF00411 Ribosomal protein S11 M1S41_02165 PF00163 Ribosomal protein S4/S9 N-terminal domain M1S41_02165 PF01479 S4 domain M1S41_02170 PF01000 RNA polymerase Rpb3/RpoA insert domain M1S41_02170 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M1S41_02170 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M1S41_02175 PF01196 Ribosomal protein L17 M1S41_02180 PF00743 Flavin-binding monooxygenase-like M1S41_02185 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_02185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_02185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_02190 PF03937 Flavinator of succinate dehydrogenase M1S41_02220 PF09526 Probable metal-binding protein (DUF2387) M1S41_02225 PF01432 Peptidase family M3 M1S41_02230 PF00575 S1 RNA binding domain M1S41_02230 PF17876 Cold shock domain M1S41_02230 PF08206 Ribonuclease B OB domain M1S41_02230 PF08461 Ribonuclease R winged-helix domain M1S41_02230 PF00773 RNB domain M1S41_02275 PF01557 Fumarylacetoacetate (FAA) hydrolase family M1S41_02280 PF12833 Helix-turn-helix domain M1S41_02285 PF00892 EamA-like transporter family M1S41_02290 PF03631 Virulence factor BrkB M1S41_02295 PF03358 NADPH-dependent FMN reductase M1S41_02320 PF02130 Uncharacterized protein family UPF0054 M1S41_02325 PF02562 PhoH-like protein M1S41_02330 PF04055 Radical SAM superfamily M1S41_02330 PF01938 TRAM domain M1S41_02330 PF00919 Uncharacterized protein family UPF0004 M1S41_02335 PF01551 Peptidase family M23 M1S41_02335 PF01464 Transglycosylase SLT domain M1S41_02335 PF10145 Phage-related minor tail protein M1S41_02345 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1S41_02345 PF00056 lactate/malate dehydrogenase, NAD binding domain M1S41_02365 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M1S41_02370 PF01066 CDP-alcohol phosphatidyltransferase M1S41_02415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_02415 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_02415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_02420 PF17932 Tetracyclin repressor-like, C-terminal domain M1S41_02420 PF00440 Bacterial regulatory proteins, tetR family M1S41_02435 PF01039 Carboxyl transferase domain M1S41_02440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_02440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_02440 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_02450 PF00289 Biotin carboxylase, N-terminal domain M1S41_02450 PF02785 Biotin carboxylase C-terminal domain M1S41_02450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S41_02450 PF00364 Biotin-requiring enzyme M1S41_02460 PF04386 Stringent starvation protein B M1S41_02465 PF13417 Glutathione S-transferase, N-terminal domain M1S41_02465 PF00043 Glutathione S-transferase, C-terminal domain M1S41_02470 PF00380 Ribosomal protein S9/S16 M1S41_02475 PF00572 Ribosomal protein L13 M1S41_02480 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M1S41_02485 PF00398 Ribosomal RNA adenine dimethylase M1S41_02490 PF00149 Calcineurin-like phosphoesterase M1S41_02510 PF16360 GTP-binding GTPase Middle Region M1S41_02510 PF13167 GTP-binding GTPase N-terminal M1S41_02510 PF01926 50S ribosome-binding GTPase M1S41_02520 PF13091 PLD-like domain M1S41_02525 PF00149 Calcineurin-like phosphoesterase M1S41_02525 PF10518 TAT (twin-arginine translocation) pathway signal sequence M1S41_02530 PF01389 OmpA-like transmembrane domain M1S41_02530 PF00691 OmpA family M1S41_02535 PF00990 Diguanylate cyclase, GGDEF domain M1S41_02535 PF17152 Periplasmic sensor domain M1S41_02570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S41_02570 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_02580 PF04273 Putative phosphatase (DUF442) M1S41_02580 PF00753 Metallo-beta-lactamase superfamily M1S41_02585 PF00561 alpha/beta hydrolase fold M1S41_02590 PF00085 Thioredoxin M1S41_02595 PF03061 Thioesterase superfamily M1S41_02605 PF04461 Protein of unknown function (DUF520) M1S41_02615 PF01266 FAD dependent oxidoreductase M1S41_02615 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S41_02625 PF03795 YCII-related domain M1S41_02630 PF04279 Intracellular septation protein A M1S41_02635 PF02811 PHP domain M1S41_02640 PF01062 Bestrophin, RFP-TM, chloride channel M1S41_02645 PF04002 RadC-like JAB domain M1S41_02650 PF04127 DNA / pantothenate metabolism flavoprotein M1S41_02650 PF02441 Flavoprotein M1S41_02655 PF02355 Protein export membrane protein M1S41_02655 PF07549 SecD/SecF GG Motif M1S41_02660 PF02355 Protein export membrane protein M1S41_02660 PF13721 SecD export protein N-terminal TM region M1S41_02660 PF07549 SecD/SecF GG Motif M1S41_02665 PF02699 Preprotein translocase subunit M1S41_02670 PF01702 Queuine tRNA-ribosyltransferase M1S41_02685 PF02547 Queuosine biosynthesis protein M1S41_02715 PF07689 KaiB domain M1S41_02715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_02715 PF00512 His Kinase A (phospho-acceptor) domain M1S41_02720 PF08335 GlnD PII-uridylyltransferase M1S41_02720 PF03710 Glutamate-ammonia ligase adenylyltransferase M1S41_02725 PF01063 Amino-transferase class IV M1S41_02740 PF01522 Polysaccharide deacetylase M1S41_02745 PF00535 Glycosyl transferase family 2 M1S41_02750 PF13439 Glycosyltransferase Family 4 M1S41_02750 PF00534 Glycosyl transferases group 1 M1S41_02775 PF17101 Stealth protein CR1, conserved region 1 M1S41_02775 PF17102 Stealth protein CR3, conserved region 3 M1S41_02775 PF11380 Stealth protein CR2, conserved region 2 M1S41_02780 PF01336 OB-fold nucleic acid binding domain M1S41_02780 PF00152 tRNA synthetases class II (D, K and N) M1S41_02780 PF02938 GAD domain M1S41_02790 PF07715 TonB-dependent Receptor Plug Domain M1S41_02790 PF00593 TonB dependent receptor M1S41_02810 PF06146 Phosphate-starvation-inducible E M1S41_02815 PF00043 Glutathione S-transferase, C-terminal domain M1S41_02815 PF02798 Glutathione S-transferase, N-terminal domain M1S41_02820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_02820 PF03466 LysR substrate binding domain M1S41_02825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_02825 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_02825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_02825 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S41_02830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_02830 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S41_02830 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_02830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_02840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_02840 PF00672 HAMP domain M1S41_02840 PF00512 His Kinase A (phospho-acceptor) domain M1S41_02845 PF00072 Response regulator receiver domain M1S41_02845 PF00486 Transcriptional regulatory protein, C terminal M1S41_02850 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M1S41_02870 PF01923 Cobalamin adenosyltransferase M1S41_02875 PF07715 TonB-dependent Receptor Plug Domain M1S41_02875 PF00593 TonB dependent receptor M1S41_02880 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M1S41_02885 PF00291 Pyridoxal-phosphate dependent enzyme M1S41_02910 PF00290 Tryptophan synthase alpha chain M1S41_02915 PF01039 Carboxyl transferase domain M1S41_02920 PF08245 Mur ligase middle domain M1S41_02920 PF02875 Mur ligase family, glutamate ligase domain M1S41_02935 PF00753 Metallo-beta-lactamase superfamily M1S41_02940 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S41_02940 PF00578 AhpC/TSA family M1S41_02945 PF07516 SecA Wing and Scaffold domain M1S41_02945 PF01043 SecA preprotein cross-linking domain M1S41_02945 PF07517 SecA DEAD-like domain M1S41_02945 PF02810 SEC-C motif M1S41_02955 PF00083 Sugar (and other) transporter M1S41_02955 PF07690 Major Facilitator Superfamily M1S41_02960 PF03006 Haemolysin-III related M1S41_02985 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S41_02985 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S41_02985 PF00378 Enoyl-CoA hydratase/isomerase M1S41_02990 PF02803 Thiolase, C-terminal domain M1S41_02990 PF00108 Thiolase, N-terminal domain M1S41_02995 PF02311 AraC-like ligand binding domain M1S41_02995 PF12833 Helix-turn-helix domain M1S41_03000 PF02515 CoA-transferase family III M1S41_03005 PF04966 Carbohydrate-selective porin, OprB family M1S41_03010 PF01011 PQQ enzyme repeat M1S41_03015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S41_03015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S41_03025 PF00893 Small Multidrug Resistance protein M1S41_03035 PF02803 Thiolase, C-terminal domain M1S41_03035 PF00108 Thiolase, N-terminal domain M1S41_03045 PF13505 Outer membrane protein beta-barrel domain M1S41_03045 PF00691 OmpA family M1S41_03055 PF01139 tRNA-splicing ligase RtcB M1S41_03060 PF00324 Amino acid permease M1S41_03065 PF05175 Methyltransferase small domain M1S41_03065 PF08468 Methyltransferase small domain N-terminal M1S41_03070 PF00860 Permease family M1S41_03075 PF00009 Elongation factor Tu GTP binding domain M1S41_03075 PF00679 Elongation factor G C-terminus M1S41_03075 PF03144 Elongation factor Tu domain 2 M1S41_03080 PF01741 Large-conductance mechanosensitive channel, MscL M1S41_03095 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M1S41_03095 PF06827 Zinc finger found in FPG and IleRS M1S41_03095 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M1S41_03100 PF02245 Methylpurine-DNA glycosylase (MPG) M1S41_03120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S41_03135 PF13098 Thioredoxin-like domain M1S41_03135 PF10411 Disulfide bond isomerase protein N-terminus M1S41_03140 PF01571 Aminomethyltransferase folate-binding domain M1S41_03150 PF04343 Protein of unknown function, DUF488 M1S41_03155 PF03831 PhnA domain M1S41_03155 PF08274 PhnA Zinc-Ribbon M1S41_03160 PF07411 Domain of unknown function (DUF1508) M1S41_03165 PF03129 Anticodon binding domain M1S41_03165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S41_03165 PF04073 Aminoacyl-tRNA editing domain M1S41_03170 PF00873 AcrB/AcrD/AcrF family M1S41_03185 PF00072 Response regulator receiver domain M1S41_03190 PF00072 Response regulator receiver domain M1S41_03195 PF01584 CheW-like domain M1S41_03200 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M1S41_03200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M1S41_03205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_03205 PF01627 Hpt domain M1S41_03205 PF00072 Response regulator receiver domain M1S41_03205 PF01584 CheW-like domain M1S41_03215 PF07687 Peptidase dimerisation domain M1S41_03215 PF01546 Peptidase family M20/M25/M40 M1S41_03220 PF08085 Entericidin EcnA/B family M1S41_03230 PF04304 Protein of unknown function (DUF454) M1S41_03235 PF03734 L,D-transpeptidase catalytic domain M1S41_03235 PF17969 L,D-transpeptidase C-terminal domain M1S41_03275 PF00258 Flavodoxin M1S41_03275 PF00175 Oxidoreductase NAD-binding domain M1S41_03275 PF00667 FAD binding domain M1S41_03290 PF07690 Major Facilitator Superfamily M1S41_03295 PF00881 Nitroreductase family M1S41_03310 PF01235 Sodium:alanine symporter family M1S41_03315 PF01734 Patatin-like phospholipase M1S41_03320 PF00291 Pyridoxal-phosphate dependent enzyme M1S41_03320 PF13291 ACT domain M1S41_03325 PF05992 SbmA/BacA-like family M1S41_03360 PF02637 GatB domain M1S41_03360 PF02934 GatB/GatE catalytic domain M1S41_03365 PF01425 Amidase M1S41_03370 PF02686 Glu-tRNAGln amidotransferase C subunit M1S41_03380 PF04085 rod shape-determining protein MreC M1S41_03385 PF04093 rod shape-determining protein MreD M1S41_03390 PF02545 Maf-like protein M1S41_03395 PF00575 S1 RNA binding domain M1S41_03395 PF10150 Ribonuclease E/G family M1S41_03405 PF06974 Protein of unknown function (DUF1298) M1S41_03405 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain M1S41_03410 PF01507 Phosphoadenosine phosphosulfate reductase family M1S41_03425 PF02525 Flavodoxin-like fold M1S41_03445 PF02673 Bacitracin resistance protein BacA M1S41_03450 PF12833 Helix-turn-helix domain M1S41_03450 PF06719 AraC-type transcriptional regulator N-terminus M1S41_03455 PF00698 Acyl transferase domain M1S41_03455 PF08240 Alcohol dehydrogenase GroES-like domain M1S41_03455 PF14765 Polyketide synthase dehydratase M1S41_03455 PF08659 KR domain M1S41_03455 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S41_03455 PF00550 Phosphopantetheine attachment site M1S41_03455 PF16197 Ketoacyl-synthetase C-terminal extension M1S41_03455 PF09277 Erythronolide synthase, docking M1S41_03455 PF08990 Erythronolide synthase docking M1S41_03455 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S41_03460 PF01965 DJ-1/PfpI family M1S41_03470 PF00324 Amino acid permease M1S41_03475 PF04303 PrpF protein M1S41_03480 PF00348 Polyprenyl synthetase M1S41_03485 PF04237 YjbR M1S41_03490 PF01145 SPFH domain / Band 7 family M1S41_03500 PF01734 Patatin-like phospholipase M1S41_03525 PF00072 Response regulator receiver domain M1S41_03525 PF00486 Transcriptional regulatory protein, C terminal M1S41_03530 PF00512 His Kinase A (phospho-acceptor) domain M1S41_03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_03530 PF08521 Two-component sensor kinase N-terminal M1S41_03540 PF00909 Ammonium Transporter Family M1S41_03545 PF03466 LysR substrate binding domain M1S41_03545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_03565 PF00133 tRNA synthetases class I (I, L, M and V) M1S41_03565 PF10458 Valyl tRNA synthetase tRNA binding arm M1S41_03565 PF08264 Anticodon-binding domain of tRNA M1S41_03585 PF01906 Putative heavy-metal-binding M1S41_03590 PF01906 Putative heavy-metal-binding M1S41_03595 PF02321 Outer membrane efflux protein M1S41_03605 PF00529 HlyD membrane-fusion protein of T1SS M1S41_03605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S41_03610 PF01569 PAP2 superfamily M1S41_03620 PF00348 Polyprenyl synthetase M1S41_03630 PF00829 Ribosomal prokaryotic L21 protein M1S41_03635 PF01016 Ribosomal L27 protein M1S41_03640 PF03548 Outer membrane lipoprotein carrier protein LolA M1S41_03650 PF02403 Seryl-tRNA synthetase N-terminal domain M1S41_03650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S41_03655 PF10414 Sirohaem synthase dimerisation region M1S41_03655 PF14824 Sirohaem biosynthesis protein central M1S41_03655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S41_03660 PF00588 SpoU rRNA Methylase family M1S41_03665 PF01638 HxlR-like helix-turn-helix M1S41_03670 PF03358 NADPH-dependent FMN reductase M1S41_03675 PF13520 Amino acid permease M1S41_03680 PF00465 Iron-containing alcohol dehydrogenase M1S41_03690 PF03099 Biotin/lipoate A/B protein ligase family M1S41_03695 PF04359 Protein of unknown function (DUF493) M1S41_03700 PF03979 Sigma-70 factor, region 1.1 M1S41_03700 PF00140 Sigma-70 factor, region 1.2 M1S41_03700 PF04542 Sigma-70 region 2 M1S41_03700 PF04539 Sigma-70 region 3 M1S41_03700 PF04545 Sigma-70, region 4 M1S41_03700 PF04546 Sigma-70, non-essential region M1S41_03720 PF00581 Rhodanese-like domain M1S41_03720 PF17773 UPF0176 acylphosphatase like domain M1S41_03730 PF00285 Citrate synthase, C-terminal domain M1S41_03735 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S41_03740 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S41_03745 PF00890 FAD binding domain M1S41_03745 PF02910 Fumarate reductase flavoprotein C-term M1S41_03750 PF13085 2Fe-2S iron-sulfur cluster binding domain M1S41_03765 PF02779 Transketolase, pyrimidine binding domain M1S41_03765 PF16870 2-oxoglutarate dehydrogenase C-terminal M1S41_03765 PF00676 Dehydrogenase E1 component M1S41_03765 PF16078 2-oxoglutarate dehydrogenase N-terminus M1S41_03770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S41_03770 PF00364 Biotin-requiring enzyme M1S41_03770 PF02817 e3 binding domain M1S41_03775 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_03775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S41_03780 PF08442 ATP-grasp domain M1S41_03780 PF00549 CoA-ligase M1S41_03785 PF02629 CoA binding domain M1S41_03785 PF00549 CoA-ligase M1S41_03790 PF00579 tRNA synthetases class I (W and Y) M1S41_03795 PF05661 Protein of unknown function (DUF808) M1S41_03800 PF04228 Putative neutral zinc metallopeptidase M1S41_03805 PF00999 Sodium/hydrogen exchanger family M1S41_03820 PF09587 Bacterial capsule synthesis protein PGA_cap M1S41_03830 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S41_03835 PF00582 Universal stress protein family M1S41_03840 PF00132 Bacterial transferase hexapeptide (six repeats) M1S41_03845 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S41_03845 PF03449 Transcription elongation factor, N-terminal M1S41_03850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S41_03850 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M1S41_03850 PF02142 MGS-like domain M1S41_03855 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M1S41_03855 PF00117 Glutamine amidotransferase class-I M1S41_03870 PF01985 CRS1 / YhbY (CRM) domain M1S41_03875 PF01728 FtsJ-like methyltransferase M1S41_03880 PF17862 AAA+ lid domain M1S41_03880 PF06480 FtsH Extracellular M1S41_03880 PF01434 Peptidase family M41 M1S41_03880 PF00004 ATPase family associated with various cellular activities (AAA) M1S41_03885 PF00809 Pterin binding enzyme M1S41_03905 PF16655 PhoD-like phosphatase, N-terminal domain M1S41_03905 PF09423 PhoD-like phosphatase M1S41_03920 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M1S41_03920 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M1S41_03935 PF00083 Sugar (and other) transporter M1S41_03940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1S41_03940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1S41_03945 PF01266 FAD dependent oxidoreductase M1S41_03945 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M1S41_03950 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1S41_03950 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1S41_03955 PF00781 Diacylglycerol kinase catalytic domain M1S41_03960 PF00149 Calcineurin-like phosphoesterase M1S41_03970 PF00166 Chaperonin 10 Kd subunit M1S41_03975 PF00118 TCP-1/cpn60 chaperonin family M1S41_03980 PF01219 Prokaryotic diacylglycerol kinase M1S41_03985 PF00753 Metallo-beta-lactamase superfamily M1S41_03990 PF03009 Glycerophosphoryl diester phosphodiesterase family M1S41_03995 PF00873 AcrB/AcrD/AcrF family M1S41_04005 PF01435 Peptidase family M48 M1S41_04010 PF01464 Transglycosylase SLT domain M1S41_04015 PF01171 PP-loop family M1S41_04025 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S41_04025 PF01464 Transglycosylase SLT domain M1S41_04030 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S41_04030 PF03449 Transcription elongation factor, N-terminal M1S41_04045 PF00501 AMP-binding enzyme M1S41_04045 PF13193 AMP-binding enzyme C-terminal domain M1S41_04045 PF00668 Condensation domain M1S41_04045 PF00550 Phosphopantetheine attachment site M1S41_04045 PF00975 Thioesterase domain M1S41_04075 PF00881 Nitroreductase family M1S41_04090 PF02595 Glycerate kinase family M1S41_04095 PF00384 Molybdopterin oxidoreductase M1S41_04100 PF02634 FdhD/NarQ family M1S41_04105 PF06803 Protein of unknown function (DUF1232) M1S41_04110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S41_04110 PF11890 Domain of unknown function (DUF3410) M1S41_04110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S41_04115 PF00152 tRNA synthetases class II (D, K and N) M1S41_04125 PF18073 Rubredoxin metal binding domain M1S41_04130 PF00324 Amino acid permease M1S41_04140 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M1S41_04140 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M1S41_04145 PF01678 Diaminopimelate epimerase M1S41_04150 PF01810 LysE type translocator M1S41_04155 PF02899 Phage integrase, N-terminal SAM-like domain M1S41_04155 PF00589 Phage integrase family M1S41_04160 PF01012 Electron transfer flavoprotein domain M1S41_04165 PF01012 Electron transfer flavoprotein domain M1S41_04165 PF00766 Electron transfer flavoprotein FAD-binding domain M1S41_04170 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S41_04170 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S41_04185 PF00535 Glycosyl transferase family 2 M1S41_04205 PF13533 Biotin-lipoyl like M1S41_04215 PF00266 Aminotransferase class-V M1S41_04230 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M1S41_04240 PF02687 FtsX-like permease family M1S41_04240 PF12704 MacB-like periplasmic core domain M1S41_04245 PF00005 ABC transporter M1S41_04250 PF03772 Competence protein M1S41_04250 PF13567 Domain of unknown function (DUF4131) M1S41_04250 PF00753 Metallo-beta-lactamase superfamily M1S41_04260 PF06965 Na+/H+ antiporter 1 M1S41_04260 PF01343 Peptidase family S49 M1S41_04265 PF12697 Alpha/beta hydrolase family M1S41_04270 PF00551 Formyl transferase M1S41_04275 PF00586 AIR synthase related protein, N-terminal domain M1S41_04275 PF02769 AIR synthase related protein, C-terminal domain M1S41_04280 PF01594 AI-2E family transporter M1S41_04285 PF00308 Bacterial dnaA protein M1S41_04285 PF08299 Bacterial dnaA protein helix-turn-helix M1S41_04285 PF11638 DnaA N-terminal domain M1S41_04325 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S41_04325 PF00588 SpoU rRNA Methylase family M1S41_04330 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M1S41_04340 PF00691 OmpA family M1S41_04345 PF04052 TolB amino-terminal domain M1S41_04345 PF07676 WD40-like Beta Propeller Repeat M1S41_04355 PF02472 Biopolymer transport protein ExbD/TolR M1S41_04360 PF01618 MotA/TolQ/ExbB proton channel family M1S41_04365 PF03061 Thioesterase superfamily M1S41_04370 PF07687 Peptidase dimerisation domain M1S41_04370 PF01546 Peptidase family M20/M25/M40 M1S41_04375 PF05491 RuvB C-terminal winged helix domain M1S41_04375 PF05496 Holliday junction DNA helicase RuvB P-loop domain M1S41_04375 PF17864 RuvB AAA lid domain M1S41_04380 PF07499 RuvA, C-terminal domain M1S41_04380 PF01330 RuvA N terminal domain M1S41_04385 PF01966 HD domain M1S41_04390 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M1S41_04390 PF02769 AIR synthase related protein, C-terminal domain M1S41_04390 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M1S41_04395 PF07690 Major Facilitator Superfamily M1S41_04400 PF01784 NIF3 (NGG1p interacting factor 3) M1S41_04405 PF00378 Enoyl-CoA hydratase/isomerase M1S41_04410 PF00293 NUDIX domain M1S41_04410 PF01467 Cytidylyltransferase-like M1S41_04420 PF00578 AhpC/TSA family M1S41_04435 PF06508 Queuosine biosynthesis protein QueC M1S41_04445 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M1S41_04445 PF14602 Hexapeptide repeat of succinyl-transferase M1S41_04445 PF00132 Bacterial transferase hexapeptide (six repeats) M1S41_04455 PF03466 LysR substrate binding domain M1S41_04455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_04460 PF12857 TOBE-like domain M1S41_04460 PF00005 ABC transporter M1S41_04465 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_04470 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_04485 PF01063 Amino-transferase class IV M1S41_04490 PF02618 YceG-like family M1S41_04495 PF02223 Thymidylate kinase M1S41_04505 PF00890 FAD binding domain M1S41_04505 PF02910 Fumarate reductase flavoprotein C-term M1S41_04510 PF13180 PDZ domain M1S41_04520 PF03144 Elongation factor Tu domain 2 M1S41_04520 PF06421 GTP-binding protein LepA C-terminus M1S41_04520 PF00009 Elongation factor Tu GTP binding domain M1S41_04520 PF00679 Elongation factor G C-terminus M1S41_04525 PF10502 Signal peptidase, peptidase S26 M1S41_04535 PF00035 Double-stranded RNA binding motif M1S41_04535 PF14622 Ribonuclease-III-like M1S41_04540 PF01926 50S ribosome-binding GTPase M1S41_04540 PF07650 KH domain M1S41_04550 PF11967 Recombination protein O N terminal M1S41_04550 PF02565 Recombination protein O C terminal M1S41_04555 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M1S41_04560 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M1S41_04565 PF00106 short chain dehydrogenase M1S41_04595 PF00155 Aminotransferase class I and II M1S41_04605 PF17151 Periplasmic sensor domain M1S41_04605 PF00990 Diguanylate cyclase, GGDEF domain M1S41_04615 PF00271 Helicase conserved C-terminal domain M1S41_04615 PF04851 Type III restriction enzyme, res subunit M1S41_04615 PF02151 UvrB/uvrC motif M1S41_04615 PF12344 Ultra-violet resistance protein B M1S41_04615 PF17757 UvrB interaction domain M1S41_04625 PF00892 EamA-like transporter family M1S41_04630 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S41_04630 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S41_04645 PF01018 GTP1/OBG M1S41_04645 PF01926 50S ribosome-binding GTPase M1S41_04650 PF01472 PUA domain M1S41_04650 PF00696 Amino acid kinase family M1S41_04660 PF07759 Protein of unknown function (DUF1615) M1S41_04665 PF01207 Dihydrouridine synthase (Dus) M1S41_04670 PF03060 Nitronate monooxygenase M1S41_04685 PF02350 UDP-N-acetylglucosamine 2-epimerase M1S41_04715 PF00875 DNA photolyase M1S41_04715 PF03441 FAD binding domain of DNA photolyase M1S41_04720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S41_04725 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_04730 PF07943 Penicillin-binding protein 5, C-terminal domain M1S41_04730 PF00768 D-alanyl-D-alanine carboxypeptidase M1S41_04740 PF03971 Monomeric isocitrate dehydrogenase M1S41_04745 PF00849 RNA pseudouridylate synthase M1S41_04750 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S41_04770 PF06779 Uncharacterised MFS-type transporter YbfB M1S41_04775 PF03466 LysR substrate binding domain M1S41_04775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_04780 PF00375 Sodium:dicarboxylate symporter family M1S41_04785 PF02567 Phenazine biosynthesis-like protein M1S41_04790 PF00675 Insulinase (Peptidase family M16) M1S41_04790 PF05193 Peptidase M16 inactive domain M1S41_04815 PF02581 Thiamine monophosphate synthase M1S41_04820 PF00202 Aminotransferase class-III M1S41_04830 PF00849 RNA pseudouridylate synthase M1S41_04835 PF00271 Helicase conserved C-terminal domain M1S41_04835 PF12137 RNA polymerase recycling family C-terminal M1S41_04835 PF00176 SNF2 family N-terminal domain M1S41_04835 PF18339 RapA N-terminal Tudor like domain 1 M1S41_04835 PF18337 RapA N-terminal Tudor like domain M1S41_04845 PF00440 Bacterial regulatory proteins, tetR family M1S41_04850 PF00175 Oxidoreductase NAD-binding domain M1S41_04850 PF00970 Oxidoreductase FAD-binding domain M1S41_04850 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S41_04855 PF00487 Fatty acid desaturase M1S41_04865 PF17754 MftR C-terminal domain M1S41_04865 PF00440 Bacterial regulatory proteins, tetR family M1S41_04875 PF00202 Aminotransferase class-III M1S41_04880 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S41_04885 PF00171 Aldehyde dehydrogenase family M1S41_04890 PF01037 Lrp/AsnC ligand binding domain M1S41_04895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S41_04895 PF00205 Thiamine pyrophosphate enzyme, central domain M1S41_04895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S41_04900 PF00324 Amino acid permease M1S41_04905 PF12849 PBP superfamily domain M1S41_04910 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_04915 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_04920 PF00005 ABC transporter M1S41_04925 PF08496 Peptidase family S49 N-terminal M1S41_04925 PF01343 Peptidase family S49 M1S41_04940 PF08328 Adenylosuccinate lyase C-terminal M1S41_04940 PF00206 Lyase M1S41_04945 PF04356 Protein of unknown function (DUF489) M1S41_04955 PF00293 NUDIX domain M1S41_04955 PF13344 Haloacid dehalogenase-like hydrolase M1S41_04960 PF00132 Bacterial transferase hexapeptide (six repeats) M1S41_04965 PF07943 Penicillin-binding protein 5, C-terminal domain M1S41_04965 PF00768 D-alanyl-D-alanine carboxypeptidase M1S41_04980 PF01975 Survival protein SurE M1S41_04985 PF01476 LysM domain M1S41_04985 PF01551 Peptidase family M23 M1S41_04990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_04990 PF03466 LysR substrate binding domain M1S41_04995 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S41_04995 PF13654 AAA domain M1S41_05000 PF07690 Major Facilitator Superfamily M1S41_05005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S41_05010 PF13593 SBF-like CPA transporter family (DUF4137) M1S41_05015 PF01197 Ribosomal protein L31 M1S41_05030 PF04055 Radical SAM superfamily M1S41_05035 PF01132 Elongation factor P (EF-P) OB domain M1S41_05035 PF08207 Elongation factor P (EF-P) KOW-like domain M1S41_05035 PF09285 Elongation factor P, C-terminal M1S41_05040 PF13722 5TM C-terminal transporter carbon starvation CstA M1S41_05040 PF02554 Carbon starvation protein CstA M1S41_05045 PF04328 Selenoprotein, putative M1S41_05080 PF06018 CodY GAF-like domain M1S41_05080 PF17853 GGDEF-like domain M1S41_05080 PF13556 PucR C-terminal helix-turn-helix domain M1S41_05095 PF00171 Aldehyde dehydrogenase family M1S41_05100 PF00324 Amino acid permease M1S41_05105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_05105 PF03466 LysR substrate binding domain M1S41_05110 PF02028 BCCT, betaine/carnitine/choline family transporter M1S41_05115 PF02028 BCCT, betaine/carnitine/choline family transporter M1S41_05120 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S41_05120 PF00355 Rieske [2Fe-2S] domain M1S41_05125 PF00171 Aldehyde dehydrogenase family M1S41_05135 PF18113 Rubredoxin binding C-terminal domain M1S41_05135 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_05160 PF00892 EamA-like transporter family M1S41_05170 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M1S41_05175 PF00083 Sugar (and other) transporter M1S41_05180 PF13378 Enolase C-terminal domain-like M1S41_05180 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S41_05185 PF09277 Erythronolide synthase, docking M1S41_05185 PF08659 KR domain M1S41_05185 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S41_05185 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S41_05185 PF16197 Ketoacyl-synthetase C-terminal extension M1S41_05185 PF08990 Erythronolide synthase docking M1S41_05185 PF14765 Polyketide synthase dehydratase M1S41_05185 PF00550 Phosphopantetheine attachment site M1S41_05185 PF00698 Acyl transferase domain M1S41_05185 PF08240 Alcohol dehydrogenase GroES-like domain M1S41_05190 PF00440 Bacterial regulatory proteins, tetR family M1S41_05210 PF02678 Pirin M1S41_05210 PF17954 Quercetinase C-terminal cupin domain M1S41_05220 PF13309 HTH domain M1S41_05220 PF08348 YheO-like PAS domain M1S41_05230 PF00550 Phosphopantetheine attachment site M1S41_05230 PF00668 Condensation domain M1S41_05230 PF13193 AMP-binding enzyme C-terminal domain M1S41_05230 PF00501 AMP-binding enzyme M1S41_05235 PF00975 Thioesterase domain M1S41_05235 PF00550 Phosphopantetheine attachment site M1S41_05235 PF13193 AMP-binding enzyme C-terminal domain M1S41_05235 PF00668 Condensation domain M1S41_05235 PF00501 AMP-binding enzyme M1S41_05240 PF01032 FecCD transport family M1S41_05245 PF01032 FecCD transport family M1S41_05250 PF00005 ABC transporter M1S41_05255 PF01497 Periplasmic binding protein M1S41_05260 PF00593 TonB dependent receptor M1S41_05260 PF07715 TonB-dependent Receptor Plug Domain M1S41_05265 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S41_05270 PF00501 AMP-binding enzyme M1S41_05270 PF00668 Condensation domain M1S41_05270 PF00550 Phosphopantetheine attachment site M1S41_05275 PF00501 AMP-binding enzyme M1S41_05275 PF13193 AMP-binding enzyme C-terminal domain M1S41_05280 PF00857 Isochorismatase family M1S41_05280 PF00550 Phosphopantetheine attachment site M1S41_05285 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S41_05295 PF00005 ABC transporter M1S41_05300 PF00005 ABC transporter M1S41_05305 PF00975 Thioesterase domain M1S41_05315 PF00425 chorismate binding enzyme M1S41_05325 PF01208 Uroporphyrinogen decarboxylase (URO-D) M1S41_05330 PF05675 Protein of unknown function (DUF817) M1S41_05345 PF00144 Beta-lactamase M1S41_05355 PF01227 GTP cyclohydrolase I M1S41_05360 PF01799 [2Fe-2S] binding domain M1S41_05360 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S41_05365 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M1S41_05365 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M1S41_05380 PF00218 Indole-3-glycerol phosphate synthase M1S41_05385 PF02885 Glycosyl transferase family, helical bundle domain M1S41_05385 PF00591 Glycosyl transferase family, a/b domain M1S41_05390 PF07715 TonB-dependent Receptor Plug Domain M1S41_05390 PF00593 TonB dependent receptor M1S41_05395 PF11838 ERAP1-like C-terminal domain M1S41_05395 PF01433 Peptidase family M1 domain M1S41_05400 PF00117 Glutamine amidotransferase class-I M1S41_05410 PF00854 POT family M1S41_05415 PF00120 Glutamine synthetase, catalytic domain M1S41_05415 PF03951 Glutamine synthetase, beta-Grasp domain M1S41_05420 PF04345 Chorismate lyase M1S41_05425 PF01040 UbiA prenyltransferase family M1S41_05460 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M1S41_05460 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M1S41_05465 PF01784 NIF3 (NGG1p interacting factor 3) M1S41_05470 PF13180 PDZ domain M1S41_05475 PF01743 Poly A polymerase head domain M1S41_05475 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S41_05480 PF00390 Malic enzyme, N-terminal domain M1S41_05480 PF03949 Malic enzyme, NAD binding domain M1S41_05480 PF01515 Phosphate acetyl/butaryl transferase M1S41_05485 PF00990 Diguanylate cyclase, GGDEF domain M1S41_05485 PF03707 Bacterial signalling protein N terminal repeat M1S41_05485 PF00563 EAL domain M1S41_05490 PF04452 RNA methyltransferase M1S41_05495 PF02219 Methylenetetrahydrofolate reductase M1S41_05500 PF05221 S-adenosyl-L-homocysteine hydrolase M1S41_05500 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M1S41_05515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_05515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_05515 PF09317 Domain of unknown function (DUF1974) M1S41_05520 PF04055 Radical SAM superfamily M1S41_05525 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S41_05525 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_05535 PF07690 Major Facilitator Superfamily M1S41_05545 PF00557 Metallopeptidase family M24 M1S41_05550 PF00318 Ribosomal protein S2 M1S41_05555 PF00889 Elongation factor TS M1S41_05565 PF12833 Helix-turn-helix domain M1S41_05585 PF05036 Sporulation related domain M1S41_05585 PF03330 Lytic transglycolase M1S41_05590 PF13406 Transglycosylase SLT domain M1S41_05595 PF01098 Cell cycle protein M1S41_05605 PF14489 QueF-like protein M1S41_05605 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M1S41_05610 PF01061 ABC-2 type transporter M1S41_05615 PF00005 ABC transporter M1S41_05645 PF00464 Serine hydroxymethyltransferase M1S41_05650 PF02321 Outer membrane efflux protein M1S41_05655 PF00873 AcrB/AcrD/AcrF family M1S41_05660 PF13533 Biotin-lipoyl like M1S41_05665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_05665 PF03466 LysR substrate binding domain M1S41_05670 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S41_05675 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_05680 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_05685 PF00005 ABC transporter M1S41_05690 PF00893 Small Multidrug Resistance protein M1S41_05695 PF00037 4Fe-4S binding domain M1S41_05700 PF01136 Peptidase family U32 M1S41_05700 PF16325 Peptidase family U32 C-terminal domain M1S41_05705 PF00155 Aminotransferase class I and II M1S41_05705 PF00392 Bacterial regulatory proteins, gntR family M1S41_05710 PF02567 Phenazine biosynthesis-like protein M1S41_05715 PF00970 Oxidoreductase FAD-binding domain M1S41_05715 PF00175 Oxidoreductase NAD-binding domain M1S41_05720 PF18389 TrmO C-terminal domain M1S41_05720 PF01980 tRNA-methyltransferase O M1S41_05730 PF00437 Type II/IV secretion system protein M1S41_05730 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S41_05740 PF00072 Response regulator receiver domain M1S41_05740 PF00486 Transcriptional regulatory protein, C terminal M1S41_05745 PF08521 Two-component sensor kinase N-terminal M1S41_05745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_05745 PF00512 His Kinase A (phospho-acceptor) domain M1S41_05755 PF00293 NUDIX domain M1S41_05765 PF00912 Transglycosylase M1S41_05765 PF00905 Penicillin binding protein transpeptidase domain M1S41_05765 PF14814 Bifunctional transglycosylase second domain M1S41_05770 PF01513 ATP-NAD kinase M1S41_05775 PF07023 Protein of unknown function (DUF1315) M1S41_05780 PF02885 Glycosyl transferase family, helical bundle domain M1S41_05780 PF00591 Glycosyl transferase family, a/b domain M1S41_05785 PF00375 Sodium:dicarboxylate symporter family M1S41_05790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_05790 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_05790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_05795 PF00756 Putative esterase M1S41_05800 PF01817 Chorismate mutase type II M1S41_05800 PF01842 ACT domain M1S41_05800 PF00800 Prephenate dehydratase M1S41_05805 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S41_05815 PF07687 Peptidase dimerisation domain M1S41_05815 PF01546 Peptidase family M20/M25/M40 M1S41_05820 PF12706 Beta-lactamase superfamily domain M1S41_05830 PF03883 Peroxide stress protein YaaA M1S41_05840 PF05690 Thiazole biosynthesis protein ThiG M1S41_05850 PF04241 Protein of unknown function (DUF423) M1S41_05855 PF00140 Sigma-70 factor, region 1.2 M1S41_05855 PF04542 Sigma-70 region 2 M1S41_05855 PF04545 Sigma-70, region 4 M1S41_05870 PF00313 'Cold-shock' DNA-binding domain M1S41_05875 PF00270 DEAD/DEAH box helicase M1S41_05875 PF00271 Helicase conserved C-terminal domain M1S41_05885 PF00881 Nitroreductase family M1S41_05890 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M1S41_05890 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M1S41_05900 PF00589 Phage integrase family M1S41_05995 PF01555 DNA methylase M1S41_06230 PF00589 Phage integrase family M1S41_06325 PF01555 DNA methylase M1S41_06560 PF01180 Dihydroorotate dehydrogenase M1S41_06565 PF02674 Colicin V production protein M1S41_06570 PF00156 Phosphoribosyl transferase domain M1S41_06590 PF01435 Peptidase family M48 M1S41_06595 PF09424 Yqey-like protein M1S41_06600 PF01165 Ribosomal protein S21 M1S41_06605 PF00814 Glycoprotease family M1S41_06625 PF00069 Protein kinase domain M1S41_06650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_06650 PF03466 LysR substrate binding domain M1S41_06655 PF00202 Aminotransferase class-III M1S41_06660 PF00171 Aldehyde dehydrogenase family M1S41_06665 PF00324 Amino acid permease M1S41_06695 PF04076 Bacterial OB fold (BOF) protein M1S41_06720 PF00561 alpha/beta hydrolase fold M1S41_06725 PF03616 Sodium/glutamate symporter M1S41_06735 PF07729 FCD domain M1S41_06735 PF00392 Bacterial regulatory proteins, gntR family M1S41_06785 PF08946 Osmosensory transporter coiled coil M1S41_06785 PF00083 Sugar (and other) transporter M1S41_06810 PF00155 Aminotransferase class I and II M1S41_06815 PF02080 TrkA-C domain M1S41_06815 PF06826 Predicted Permease Membrane Region M1S41_06825 PF04403 Paraquat-inducible protein A M1S41_06830 PF02470 MlaD protein M1S41_06840 PF01177 Asp/Glu/Hydantoin racemase M1S41_06845 PF00892 EamA-like transporter family M1S41_06850 PF07995 Glucose / Sorbosone dehydrogenase M1S41_06860 PF13610 DDE domain M1S41_06870 PF01636 Phosphotransferase enzyme family M1S41_06875 PF13610 DDE domain M1S41_06890 PF00132 Bacterial transferase hexapeptide (six repeats) M1S41_06900 PF00893 Small Multidrug Resistance protein M1S41_06905 PF00809 Pterin binding enzyme M1S41_06920 PF07091 Ribosomal RNA methyltransferase (FmrO) M1S41_06935 PF12848 ABC transporter M1S41_06935 PF00005 ABC transporter M1S41_06940 PF01636 Phosphotransferase enzyme family M1S41_06950 PF03050 Transposase IS66 family M1S41_06950 PF13005 zinc-finger binding domain of transposase IS66 M1S41_06950 PF13817 IS66 C-terminal element M1S41_06950 PF13007 Transposase C of IS166 homeodomain M1S41_06975 PF13610 DDE domain M1S41_06990 PF00375 Sodium:dicarboxylate symporter family M1S41_07000 PF16123 Hydroxyacylglutathione hydrolase C-terminus M1S41_07000 PF00753 Metallo-beta-lactamase superfamily M1S41_07005 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_07010 PF00005 ABC transporter M1S41_07010 PF09383 NIL domain M1S41_07015 PF03180 NLPA lipoprotein M1S41_07020 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M1S41_07020 PF02843 Phosphoribosylglycinamide synthetase, C domain M1S41_07020 PF02844 Phosphoribosylglycinamide synthetase, N domain M1S41_07025 PF01808 AICARFT/IMPCHase bienzyme M1S41_07025 PF02142 MGS-like domain M1S41_07030 PF02954 Bacterial regulatory protein, Fis family M1S41_07050 PF01134 Glucose inhibited division protein A M1S41_07050 PF13932 GidA associated domain M1S41_07060 PF14403 Circularly permuted ATP-grasp type 2 M1S41_07070 PF01841 Transglutaminase-like superfamily M1S41_07070 PF08379 Bacterial transglutaminase-like N-terminal region M1S41_07080 PF00842 Alanine racemase, C-terminal domain M1S41_07080 PF01168 Alanine racemase, N-terminal domain M1S41_07085 PF03796 DnaB-like helicase C terminal domain M1S41_07085 PF00772 DnaB-like helicase N terminal domain M1S41_07090 PF03948 Ribosomal protein L9, C-terminal domain M1S41_07090 PF01281 Ribosomal protein L9, N-terminal domain M1S41_07095 PF01084 Ribosomal protein S18 M1S41_07100 PF01250 Ribosomal protein S6 M1S41_07105 PF01040 UbiA prenyltransferase family M1S41_07110 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M1S41_07115 PF00510 Cytochrome c oxidase subunit III M1S41_07120 PF00115 Cytochrome C and Quinol oxidase polypeptide I M1S41_07125 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M1S41_07125 PF06481 COX Aromatic Rich Motif M1S41_07135 PF00391 PEP-utilising enzyme, mobile domain M1S41_07135 PF02896 PEP-utilising enzyme, TIM barrel domain M1S41_07135 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M1S41_07140 PF03618 Kinase/pyrophosphorylase M1S41_07150 PF01522 Polysaccharide deacetylase M1S41_07150 PF14883 Hypothetical glycosyl hydrolase family 13 M1S41_07155 PF00535 Glycosyl transferase family 2 M1S41_07160 PF13994 PgaD-like protein M1S41_07170 PF00296 Luciferase-like monooxygenase M1S41_07185 PF03466 LysR substrate binding domain M1S41_07185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_07195 PF00472 RF-1 domain M1S41_07195 PF03462 PCRF domain M1S41_07200 PF17827 PrmC N-terminal domain M1S41_07200 PF13847 Methyltransferase domain M1S41_07205 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_07210 PF09084 NMT1/THI5 like M1S41_07215 PF12833 Helix-turn-helix domain M1S41_07220 PF00106 short chain dehydrogenase M1S41_07225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_07225 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_07225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_07230 PF13193 AMP-binding enzyme C-terminal domain M1S41_07230 PF00501 AMP-binding enzyme M1S41_07235 PF01613 Flavin reductase like domain M1S41_07240 PF00899 ThiF family M1S41_07245 PF03109 ABC1 family M1S41_07260 PF03814 Potassium-transporting ATPase A subunit M1S41_07270 PF02669 K+-transporting ATPase, c chain M1S41_07275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_07275 PF13493 Domain of unknown function (DUF4118) M1S41_07275 PF02702 Osmosensitive K+ channel His kinase sensor domain M1S41_07275 PF00512 His Kinase A (phospho-acceptor) domain M1S41_07280 PF00072 Response regulator receiver domain M1S41_07280 PF00486 Transcriptional regulatory protein, C terminal M1S41_07285 PF00120 Glutamine synthetase, catalytic domain M1S41_07295 PF03232 Ubiquinone biosynthesis protein COQ7 M1S41_07300 PF07690 Major Facilitator Superfamily M1S41_07320 PF00330 Aconitase family (aconitate hydratase) M1S41_07320 PF06434 Aconitate hydratase 2 N-terminus M1S41_07320 PF11791 Aconitate B N-terminal domain M1S41_07330 PF00027 Cyclic nucleotide-binding domain M1S41_07330 PF00520 Ion transport protein M1S41_07335 PF07690 Major Facilitator Superfamily M1S41_07350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_07350 PF03466 LysR substrate binding domain M1S41_07355 PF04284 Protein of unknown function (DUF441) M1S41_07365 PF01479 S4 domain M1S41_07365 PF00849 RNA pseudouridylate synthase M1S41_07380 PF00849 RNA pseudouridylate synthase M1S41_07380 PF01479 S4 domain M1S41_07385 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M1S41_07390 PF01119 DNA mismatch repair protein, C-terminal domain M1S41_07390 PF08676 MutL C terminal dimerisation domain M1S41_07400 PF17209 Hfq protein M1S41_07410 PF00881 Nitroreductase family M1S41_07420 PF00149 Calcineurin-like phosphoesterase M1S41_07425 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S41_07430 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M1S41_07430 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S41_07435 PF02540 NAD synthase M1S41_07435 PF00958 GMP synthase C terminal domain M1S41_07435 PF00117 Glutamine amidotransferase class-I M1S41_07440 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M1S41_07445 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M1S41_07450 PF13520 Amino acid permease M1S41_07455 PF00171 Aldehyde dehydrogenase family M1S41_07470 PF00465 Iron-containing alcohol dehydrogenase M1S41_07475 PF05970 PIF1-like helicase M1S41_07475 PF14493 Helix-turn-helix domain M1S41_07485 PF06445 GyrI-like small molecule binding domain M1S41_07490 PF02110 Hydroxyethylthiazole kinase family M1S41_07505 PF11940 Domain of unknown function (DUF3458) Ig-like fold M1S41_07505 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M1S41_07505 PF01433 Peptidase family M1 domain M1S41_07515 PF00106 short chain dehydrogenase M1S41_07525 PF01817 Chorismate mutase type II M1S41_07530 PF01037 Lrp/AsnC ligand binding domain M1S41_07545 PF00440 Bacterial regulatory proteins, tetR family M1S41_07550 PF00593 TonB dependent receptor M1S41_07550 PF07715 TonB-dependent Receptor Plug Domain M1S41_07555 PF00924 Mechanosensitive ion channel M1S41_07590 PF00593 TonB dependent receptor M1S41_07590 PF07715 TonB-dependent Receptor Plug Domain M1S41_07610 PF00005 ABC transporter M1S41_07610 PF12848 ABC transporter M1S41_07615 PF00582 Universal stress protein family M1S41_07640 PF00690 Cation transporter/ATPase, N-terminus M1S41_07640 PF00689 Cation transporting ATPase, C-terminus M1S41_07645 PF02308 MgtC family M1S41_07650 PF03594 Benzoate membrane transport protein M1S41_07655 PF01037 Lrp/AsnC ligand binding domain M1S41_07660 PF01810 LysE type translocator M1S41_07665 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1S41_07670 PF03466 LysR substrate binding domain M1S41_07670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_07680 PF00108 Thiolase, N-terminal domain M1S41_07680 PF02803 Thiolase, C-terminal domain M1S41_07690 PF01575 MaoC like domain M1S41_07695 PF00144 Beta-lactamase M1S41_07705 PF07690 Major Facilitator Superfamily M1S41_07710 PF12169 DNA polymerase III subunits gamma and tau domain III M1S41_07710 PF12170 DNA polymerase III tau subunit V interacting with alpha M1S41_07710 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M1S41_07715 PF05506 Domain of unknown function (DUF756) M1S41_07715 PF04185 Phosphoesterase family M1S41_07720 PF03061 Thioesterase superfamily M1S41_07725 PF00465 Iron-containing alcohol dehydrogenase M1S41_07735 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S41_07740 PF01565 FAD binding domain M1S41_07740 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M1S41_07755 PF01645 Conserved region in glutamate synthase M1S41_07855 PF01555 DNA methylase M1S41_08125 PF12832 MFS_1 like family M1S41_08135 PF02785 Biotin carboxylase C-terminal domain M1S41_08135 PF00289 Biotin carboxylase, N-terminal domain M1S41_08135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S41_08140 PF00364 Biotin-requiring enzyme M1S41_08145 PF01220 Dehydroquinase class II M1S41_08150 PF00817 impB/mucB/samB family M1S41_08150 PF13438 Domain of unknown function (DUF4113) M1S41_08150 PF11799 impB/mucB/samB family C-terminal domain M1S41_08165 PF00072 Response regulator receiver domain M1S41_08165 PF00486 Transcriptional regulatory protein, C terminal M1S41_08175 PF04324 BFD-like [2Fe-2S] binding domain M1S41_08175 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S41_08175 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S41_08175 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_08175 PF13806 Rieske-like [2Fe-2S] domain M1S41_08175 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S41_08180 PF04324 BFD-like [2Fe-2S] binding domain M1S41_08180 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_08180 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S41_08180 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S41_08180 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S41_08185 PF04324 BFD-like [2Fe-2S] binding domain M1S41_08185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S41_08185 PF00384 Molybdopterin oxidoreductase M1S41_08185 PF01568 Molydopterin dinucleotide binding domain M1S41_08190 PF12804 MobA-like NTP transferase domain M1S41_08195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S41_08195 PF01568 Molydopterin dinucleotide binding domain M1S41_08195 PF00384 Molybdopterin oxidoreductase M1S41_08200 PF06463 Molybdenum Cofactor Synthesis C M1S41_08200 PF04055 Radical SAM superfamily M1S41_08210 PF02391 MoaE protein M1S41_08215 PF01967 MoaC family M1S41_08215 PF00994 Probable molybdopterin binding domain M1S41_08220 PF03453 MoeA N-terminal region (domain I and II) M1S41_08220 PF00994 Probable molybdopterin binding domain M1S41_08220 PF03454 MoeA C-terminal region (domain IV) M1S41_08225 PF01638 HxlR-like helix-turn-helix M1S41_08230 PF00392 Bacterial regulatory proteins, gntR family M1S41_08230 PF00155 Aminotransferase class I and II M1S41_08235 PF00892 EamA-like transporter family M1S41_08255 PF02635 DsrE/DsrF-like family M1S41_08260 PF16363 GDP-mannose 4,6 dehydratase M1S41_08265 PF10415 Fumarase C C-terminus M1S41_08265 PF00206 Lyase M1S41_08285 PF01266 FAD dependent oxidoreductase M1S41_08295 PF02542 YgbB family M1S41_08305 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S41_08305 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S41_08325 PF02954 Bacterial regulatory protein, Fis family M1S41_08325 PF00072 Response regulator receiver domain M1S41_08325 PF00158 Sigma-54 interaction domain M1S41_08330 PF00989 PAS fold M1S41_08330 PF00512 His Kinase A (phospho-acceptor) domain M1S41_08330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_08335 PF00919 Uncharacterized protein family UPF0004 M1S41_08335 PF04055 Radical SAM superfamily M1S41_08335 PF18693 TRAM domain M1S41_08340 PF00696 Amino acid kinase family M1S41_08345 PF01765 Ribosome recycling factor M1S41_08350 PF01255 Putative undecaprenyl diphosphate synthase M1S41_08360 PF13288 DXP reductoisomerase C-terminal domain M1S41_08360 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M1S41_08360 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M1S41_08365 PF13180 PDZ domain M1S41_08365 PF17820 PDZ domain M1S41_08365 PF02163 Peptidase family M50 M1S41_08370 PF01103 Surface antigen M1S41_08370 PF07244 Surface antigen variable number repeat M1S41_08380 PF00132 Bacterial transferase hexapeptide (six repeats) M1S41_08380 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M1S41_08385 PF07977 FabA-like domain M1S41_08390 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M1S41_08390 PF00132 Bacterial transferase hexapeptide (six repeats) M1S41_08405 PF02631 RecX family M1S41_08410 PF00154 recA bacterial DNA recombination protein M1S41_08415 PF01479 S4 domain M1S41_08420 PF13419 Haloacid dehalogenase-like hydrolase M1S41_08445 PF01037 Lrp/AsnC ligand binding domain M1S41_08450 PF00266 Aminotransferase class-V M1S41_08455 PF00324 Amino acid permease M1S41_08470 PF00082 Subtilase family M1S41_08470 PF05922 Peptidase inhibitor I9 M1S41_08475 PF01740 STAS domain M1S41_08475 PF00916 Sulfate permease family M1S41_08480 PF02586 SOS response associated peptidase (SRAP) M1S41_08485 PF07995 Glucose / Sorbosone dehydrogenase M1S41_08495 PF00990 Diguanylate cyclase, GGDEF domain M1S41_08495 PF00563 EAL domain M1S41_08495 PF03707 Bacterial signalling protein N terminal repeat M1S41_08515 PF02378 Phosphotransferase system, EIIC M1S41_08515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M1S41_08520 PF00294 pfkB family carbohydrate kinase M1S41_08525 PF05524 PEP-utilising enzyme, N-terminal M1S41_08525 PF00391 PEP-utilising enzyme, mobile domain M1S41_08525 PF02896 PEP-utilising enzyme, TIM barrel domain M1S41_08525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M1S41_08525 PF00381 PTS HPr component phosphorylation site M1S41_08550 PF05525 Branched-chain amino acid transport protein M1S41_08555 PF00557 Metallopeptidase family M24 M1S41_08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_08560 PF03466 LysR substrate binding domain M1S41_08570 PF00462 Glutaredoxin M1S41_08575 PF00202 Aminotransferase class-III M1S41_08580 PF00478 IMP dehydrogenase / GMP reductase domain M1S41_08580 PF00571 CBS domain M1S41_08605 PF00448 SRP54-type protein, GTPase domain M1S41_08605 PF02881 SRP54-type protein, helical bundle domain M1S41_08615 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M1S41_08630 PF08173 Membrane bound YbgT-like protein M1S41_08635 PF02322 Cytochrome bd terminal oxidase subunit II M1S41_08640 PF01654 Cytochrome bd terminal oxidase subunit I M1S41_08650 PF07290 Protein of unknown function (DUF1449) M1S41_08660 PF00294 pfkB family carbohydrate kinase M1S41_08665 PF07715 TonB-dependent Receptor Plug Domain M1S41_08665 PF00593 TonB dependent receptor M1S41_08670 PF00675 Insulinase (Peptidase family M16) M1S41_08670 PF05193 Peptidase M16 inactive domain M1S41_08670 PF08367 Peptidase M16C associated M1S41_08675 PF02253 Phospholipase A1 M1S41_08680 PF02386 Cation transport protein M1S41_08685 PF02080 TrkA-C domain M1S41_08685 PF02254 TrkA-N domain M1S41_08690 PF00291 Pyridoxal-phosphate dependent enzyme M1S41_08690 PF00585 C-terminal regulatory domain of Threonine dehydratase M1S41_08695 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M1S41_08710 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S41_08710 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S41_08720 PF02617 ATP-dependent Clp protease adaptor protein ClpS M1S41_08725 PF02861 Clp amino terminal domain, pathogenicity island component M1S41_08725 PF17871 AAA lid domain M1S41_08725 PF10431 C-terminal, D2-small domain, of ClpB protein M1S41_08725 PF07724 AAA domain (Cdc48 subfamily) M1S41_08725 PF00004 ATPase family associated with various cellular activities (AAA) M1S41_08730 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M1S41_08735 PF00793 DAHP synthetase I family M1S41_08750 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_08750 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S41_08780 PF00117 Glutamine amidotransferase class-I M1S41_08780 PF06418 CTP synthase N-terminus M1S41_08785 PF00793 DAHP synthetase I family M1S41_08790 PF00113 Enolase, C-terminal TIM barrel domain M1S41_08790 PF03952 Enolase, N-terminal domain M1S41_08795 PF04239 Protein of unknown function (DUF421) M1S41_08800 PF04977 Septum formation initiator M1S41_08805 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M1S41_08820 PF00108 Thiolase, N-terminal domain M1S41_08820 PF02803 Thiolase, C-terminal domain M1S41_08825 PF00206 Lyase M1S41_08825 PF10397 Adenylosuccinate lyase C-terminus M1S41_08830 PF00561 alpha/beta hydrolase fold M1S41_08835 PF07690 Major Facilitator Superfamily M1S41_08840 PF02627 Carboxymuconolactone decarboxylase family M1S41_08845 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M1S41_08845 PF00775 Dioxygenase M1S41_08850 PF00775 Dioxygenase M1S41_08855 PF01487 Type I 3-dehydroquinase M1S41_08860 PF05048 Periplasmic copper-binding protein (NosD) M1S41_08865 PF04966 Carbohydrate-selective porin, OprB family M1S41_08870 PF01011 PQQ enzyme repeat M1S41_08870 PF13360 PQQ-like domain M1S41_08880 PF04143 Sulphur transport M1S41_08890 PF00753 Metallo-beta-lactamase superfamily M1S41_08895 PF09339 IclR helix-turn-helix domain M1S41_08895 PF01614 Bacterial transcriptional regulator M1S41_08900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_08900 PF03466 LysR substrate binding domain M1S41_08905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_08905 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_08905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_08920 PF00106 short chain dehydrogenase M1S41_08930 PF07690 Major Facilitator Superfamily M1S41_08940 PF01425 Amidase M1S41_08945 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S41_08960 PF00355 Rieske [2Fe-2S] domain M1S41_08960 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S41_08975 PF00175 Oxidoreductase NAD-binding domain M1S41_08975 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S41_08980 PF01613 Flavin reductase like domain M1S41_08985 PF02311 AraC-like ligand binding domain M1S41_08985 PF12833 Helix-turn-helix domain M1S41_08990 PF01179 Copper amine oxidase, enzyme domain M1S41_08990 PF07833 Copper amine oxidase N-terminal domain M1S41_08990 PF02727 Copper amine oxidase, N2 domain M1S41_08990 PF02728 Copper amine oxidase, N3 domain M1S41_09000 PF00171 Aldehyde dehydrogenase family M1S41_09005 PF01804 Penicillin amidase M1S41_09010 PF12146 Serine aminopeptidase, S33 M1S41_09015 PF00108 Thiolase, N-terminal domain M1S41_09015 PF02803 Thiolase, C-terminal domain M1S41_09020 PF01144 Coenzyme A transferase M1S41_09025 PF01144 Coenzyme A transferase M1S41_09030 PF00775 Dioxygenase M1S41_09030 PF04444 Catechol dioxygenase N terminus M1S41_09035 PF02426 Muconolactone delta-isomerase M1S41_09040 PF13378 Enolase C-terminal domain-like M1S41_09040 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S41_09045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_09045 PF03466 LysR substrate binding domain M1S41_09055 PF00392 Bacterial regulatory proteins, gntR family M1S41_09055 PF07729 FCD domain M1S41_09060 PF00920 Dehydratase family M1S41_09065 PF07690 Major Facilitator Superfamily M1S41_09075 PF00171 Aldehyde dehydrogenase family M1S41_09095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_09095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_09095 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_09105 PF00158 Sigma-54 interaction domain M1S41_09105 PF02954 Bacterial regulatory protein, Fis family M1S41_09105 PF06506 Propionate catabolism activator M1S41_09110 PF13193 AMP-binding enzyme C-terminal domain M1S41_09110 PF00501 AMP-binding enzyme M1S41_09115 PF04341 Protein of unknown function, DUF485 M1S41_09120 PF00474 Sodium:solute symporter family M1S41_09125 PF08240 Alcohol dehydrogenase GroES-like domain M1S41_09125 PF00107 Zinc-binding dehydrogenase M1S41_09130 PF00171 Aldehyde dehydrogenase family M1S41_09140 PF00561 alpha/beta hydrolase fold M1S41_09145 PF06628 Catalase-related immune-responsive M1S41_09145 PF00199 Catalase M1S41_09160 PF07859 alpha/beta hydrolase fold M1S41_09165 PF01047 MarR family M1S41_09170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S41_09170 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_09175 PF00106 short chain dehydrogenase M1S41_09180 PF01872 RibD C-terminal domain M1S41_09185 PF09278 MerR, DNA binding M1S41_09185 PF00376 MerR family regulatory protein M1S41_09195 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_09205 PF12706 Beta-lactamase superfamily domain M1S41_09210 PF00440 Bacterial regulatory proteins, tetR family M1S41_09210 PF08359 YsiA-like protein, C-terminal region M1S41_09220 PF00857 Isochorismatase family M1S41_09225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_09225 PF03466 LysR substrate binding domain M1S41_09230 PF07995 Glucose / Sorbosone dehydrogenase M1S41_09235 PF00999 Sodium/hydrogen exchanger family M1S41_09235 PF02254 TrkA-N domain M1S41_09245 PF01546 Peptidase family M20/M25/M40 M1S41_09245 PF07687 Peptidase dimerisation domain M1S41_09255 PF17287 POTRA domain M1S41_09255 PF08479 POTRA domain, ShlB-type M1S41_09255 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M1S41_09260 PF13018 Extended Signal Peptide of Type V secretion system M1S41_09260 PF13332 Hemagglutinin repeat M1S41_09260 PF05860 haemagglutination activity domain M1S41_09260 PF04829 Pre-toxin domain with VENN motif M1S41_09275 PF07690 Major Facilitator Superfamily M1S41_09280 PF04909 Amidohydrolase M1S41_09290 PF00392 Bacterial regulatory proteins, gntR family M1S41_09290 PF07702 UTRA domain M1S41_09295 PF08450 SMP-30/Gluconolactonase/LRE-like region M1S41_09305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_09305 PF03466 LysR substrate binding domain M1S41_09325 PF07690 Major Facilitator Superfamily M1S41_09330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S41_09330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S41_09330 PF01842 ACT domain M1S41_09335 PF03737 Aldolase/RraA M1S41_09365 PF00529 HlyD membrane-fusion protein of T1SS M1S41_09365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S41_09380 PF00171 Aldehyde dehydrogenase family M1S41_09385 PF00920 Dehydratase family M1S41_09395 PF03466 LysR substrate binding domain M1S41_09395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_09400 PF01370 NAD dependent epimerase/dehydratase family M1S41_09405 PF07690 Major Facilitator Superfamily M1S41_09410 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S41_09410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S41_09415 PF12833 Helix-turn-helix domain M1S41_09415 PF06719 AraC-type transcriptional regulator N-terminus M1S41_09430 PF08240 Alcohol dehydrogenase GroES-like domain M1S41_09430 PF00107 Zinc-binding dehydrogenase M1S41_09440 PF01032 FecCD transport family M1S41_09445 PF00005 ABC transporter M1S41_09465 PF14572 Phosphoribosyl synthetase-associated domain M1S41_09465 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S41_09470 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S41_09545 PF00196 Bacterial regulatory proteins, luxR family M1S41_09550 PF01425 Amidase M1S41_09555 PF13533 Biotin-lipoyl like M1S41_09560 PF07690 Major Facilitator Superfamily M1S41_09585 PF01975 Survival protein SurE M1S41_09595 PF02824 TGS domain M1S41_09595 PF04607 Region found in RelA / SpoT proteins M1S41_09595 PF13291 ACT domain M1S41_09645 PF12146 Serine aminopeptidase, S33 M1S41_09650 PF02311 AraC-like ligand binding domain M1S41_09650 PF12833 Helix-turn-helix domain M1S41_09660 PF16527 Two-component sensor protein CpxA, periplasmic domain M1S41_09660 PF00672 HAMP domain M1S41_09660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_09660 PF00512 His Kinase A (phospho-acceptor) domain M1S41_09680 PF00529 HlyD membrane-fusion protein of T1SS M1S41_09680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S41_09685 PF00873 AcrB/AcrD/AcrF family M1S41_09690 PF02321 Outer membrane efflux protein M1S41_09695 PF12146 Serine aminopeptidase, S33 M1S41_09700 PF00743 Flavin-binding monooxygenase-like M1S41_09705 PF01593 Flavin containing amine oxidoreductase M1S41_09720 PF01266 FAD dependent oxidoreductase M1S41_09740 PF16970 Type-1 fimbrial protein, A M1S41_09750 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S41_09750 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S41_09755 PF00577 Outer membrane usher protein M1S41_09755 PF13953 PapC C-terminal domain M1S41_09755 PF13954 PapC N-terminal domain M1S41_09760 PF00419 Fimbrial protein M1S41_09770 PF08240 Alcohol dehydrogenase GroES-like domain M1S41_09770 PF00107 Zinc-binding dehydrogenase M1S41_09780 PF00199 Catalase M1S41_09795 PF13091 PLD-like domain M1S41_09810 PF01244 Membrane dipeptidase (Peptidase family M19) M1S41_09815 PF04055 Radical SAM superfamily M1S41_09815 PF13186 Iron-sulfur cluster-binding domain M1S41_09820 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M1S41_09825 PF03070 TENA/THI-4/PQQC family M1S41_09830 PF12706 Beta-lactamase superfamily domain M1S41_09835 PF08042 PqqA family M1S41_09840 PF13089 Polyphosphate kinase N-terminal domain M1S41_09840 PF17941 Polyphosphate kinase C-terminal domain 1 M1S41_09840 PF13090 Polyphosphate kinase C-terminal domain 2 M1S41_09840 PF02503 Polyphosphate kinase middle domain M1S41_09845 PF00149 Calcineurin-like phosphoesterase M1S41_09855 PF00857 Isochorismatase family M1S41_09855 PF00550 Phosphopantetheine attachment site M1S41_09860 PF00106 short chain dehydrogenase M1S41_09865 PF03459 TOBE domain M1S41_09865 PF00005 ABC transporter M1S41_09870 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_09880 PF03459 TOBE domain M1S41_09880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_09885 PF00355 Rieske [2Fe-2S] domain M1S41_09885 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S41_09890 PF00866 Ring hydroxylating beta subunit M1S41_09895 PF00175 Oxidoreductase NAD-binding domain M1S41_09895 PF00970 Oxidoreductase FAD-binding domain M1S41_09895 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S41_09900 PF14525 AraC-binding-like domain M1S41_09900 PF12833 Helix-turn-helix domain M1S41_09910 PF01613 Flavin reductase like domain M1S41_09925 PF01738 Dienelactone hydrolase family M1S41_09930 PF07690 Major Facilitator Superfamily M1S41_09935 PF06719 AraC-type transcriptional regulator N-terminus M1S41_09935 PF12833 Helix-turn-helix domain M1S41_09960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_09960 PF03466 LysR substrate binding domain M1S41_09965 PF01144 Coenzyme A transferase M1S41_09970 PF01144 Coenzyme A transferase M1S41_09975 PF02667 Short chain fatty acid transporter M1S41_09980 PF00108 Thiolase, N-terminal domain M1S41_09980 PF02803 Thiolase, C-terminal domain M1S41_09985 PF03466 LysR substrate binding domain M1S41_09985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_09990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_09990 PF03466 LysR substrate binding domain M1S41_10005 PF10415 Fumarase C C-terminus M1S41_10005 PF00206 Lyase M1S41_10010 PF00593 TonB dependent receptor M1S41_10010 PF07715 TonB-dependent Receptor Plug Domain M1S41_10015 PF00083 Sugar (and other) transporter M1S41_10030 PF00005 ABC transporter M1S41_10035 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_10040 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S41_10055 PF07702 UTRA domain M1S41_10055 PF00392 Bacterial regulatory proteins, gntR family M1S41_10065 PF02525 Flavodoxin-like fold M1S41_10070 PF01638 HxlR-like helix-turn-helix M1S41_10075 PF06445 GyrI-like small molecule binding domain M1S41_10075 PF12833 Helix-turn-helix domain M1S41_10090 PF01925 Sulfite exporter TauE/SafE M1S41_10105 PF00753 Metallo-beta-lactamase superfamily M1S41_10105 PF04273 Putative phosphatase (DUF442) M1S41_10110 PF00158 Sigma-54 interaction domain M1S41_10110 PF00072 Response regulator receiver domain M1S41_10110 PF02954 Bacterial regulatory protein, Fis family M1S41_10115 PF01062 Bestrophin, RFP-TM, chloride channel M1S41_10120 PF08240 Alcohol dehydrogenase GroES-like domain M1S41_10120 PF00107 Zinc-binding dehydrogenase M1S41_10125 PF00106 short chain dehydrogenase M1S41_10130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S41_10130 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_10135 PF00364 Biotin-requiring enzyme M1S41_10135 PF02817 e3 binding domain M1S41_10135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S41_10140 PF02779 Transketolase, pyrimidine binding domain M1S41_10140 PF02780 Transketolase, C-terminal domain M1S41_10145 PF00676 Dehydrogenase E1 component M1S41_10150 PF04055 Radical SAM superfamily M1S41_10165 PF08448 PAS fold M1S41_10165 PF00990 Diguanylate cyclase, GGDEF domain M1S41_10170 PF01264 Chorismate synthase M1S41_10175 PF05175 Methyltransferase small domain M1S41_10180 PF00291 Pyridoxal-phosphate dependent enzyme M1S41_10190 PF00004 ATPase family associated with various cellular activities (AAA) M1S41_10190 PF17862 AAA+ lid domain M1S41_10190 PF01434 Peptidase family M41 M1S41_10200 PF05166 YcgL domain M1S41_10220 PF00570 HRDC domain M1S41_10220 PF01612 3'-5' exonuclease M1S41_10225 PF13662 Toprim domain M1S41_10225 PF02132 RecR protein M1S41_10230 PF02575 YbaB/EbfC DNA-binding family M1S41_10240 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S41_10245 PF00561 alpha/beta hydrolase fold M1S41_10250 PF08241 Methyltransferase domain M1S41_10280 PF01230 HIT domain M1S41_10315 PF00005 ABC transporter M1S41_10320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S41_10330 PF02684 Lipid-A-disaccharide synthetase M1S41_10335 PF00593 TonB dependent receptor M1S41_10335 PF07715 TonB-dependent Receptor Plug Domain M1S41_10355 PF01925 Sulfite exporter TauE/SafE M1S41_10360 PF00793 DAHP synthetase I family M1S41_10365 PF02654 Cobalamin-5-phosphate synthase M1S41_10380 PF02277 Phosphoribosyltransferase M1S41_10385 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M1S41_10395 PF13419 Haloacid dehalogenase-like hydrolase M1S41_10420 PF07715 TonB-dependent Receptor Plug Domain M1S41_10420 PF00593 TonB dependent receptor M1S41_10435 PF06276 Ferric iron reductase FhuF-like transporter M1S41_10435 PF04183 IucA / IucC family M1S41_10440 PF04183 IucA / IucC family M1S41_10440 PF06276 Ferric iron reductase FhuF-like transporter M1S41_10445 PF07690 Major Facilitator Superfamily M1S41_10450 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S41_10455 PF06276 Ferric iron reductase FhuF-like transporter M1S41_10455 PF04183 IucA / IucC family M1S41_10460 PF04073 Aminoacyl-tRNA editing domain M1S41_10470 PF03109 ABC1 family M1S41_10475 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_10475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_10475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_10480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_10480 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_10480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_10485 PF00487 Fatty acid desaturase M1S41_10490 PF12852 Cupin M1S41_10490 PF12833 Helix-turn-helix domain M1S41_10495 PF09312 SurA N-terminal domain M1S41_10495 PF00639 PPIC-type PPIASE domain M1S41_10500 PF00216 Bacterial DNA-binding protein M1S41_10515 PF02082 Transcriptional regulator M1S41_10520 PF00266 Aminotransferase class-V M1S41_10525 PF01592 NifU-like N terminal domain M1S41_10530 PF01521 Iron-sulphur cluster biosynthesis M1S41_10535 PF07743 HSCB C-terminal oligomerisation domain M1S41_10535 PF00226 DnaJ domain M1S41_10540 PF00012 Hsp70 protein M1S41_10545 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S41_10550 PF00211 Adenylate and Guanylate cyclase catalytic domain M1S41_10560 PF03461 TRCF domain M1S41_10560 PF00270 DEAD/DEAH box helicase M1S41_10560 PF02559 CarD-like/TRCF domain M1S41_10560 PF00271 Helicase conserved C-terminal domain M1S41_10560 PF17757 UvrB interaction domain M1S41_10580 PF03737 Aldolase/RraA M1S41_10585 PF13460 NAD(P)H-binding M1S41_10590 PF01649 Ribosomal protein S20 M1S41_10600 PF00459 Inositol monophosphatase family M1S41_10615 PF00005 ABC transporter M1S41_10615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S41_10620 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_10625 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_10630 PF01432 Peptidase family M3 M1S41_10650 PF07715 TonB-dependent Receptor Plug Domain M1S41_10650 PF00593 TonB dependent receptor M1S41_10660 PF01618 MotA/TolQ/ExbB proton channel family M1S41_10665 PF02472 Biopolymer transport protein ExbD/TolR M1S41_10670 PF02472 Biopolymer transport protein ExbD/TolR M1S41_10680 PF01274 Malate synthase M1S41_10800 PF10668 Phage terminase small subunit M1S41_10800 PF03592 Terminase small subunit M1S41_10890 PF00589 Phage integrase family M1S41_10890 PF02899 Phage integrase, N-terminal SAM-like domain M1S41_10895 PF03969 AFG1-like ATPase M1S41_10905 PF00743 Flavin-binding monooxygenase-like M1S41_10915 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M1S41_10925 PF00216 Bacterial DNA-binding protein M1S41_10930 PF00575 S1 RNA binding domain M1S41_10935 PF02224 Cytidylate kinase M1S41_10945 PF14437 MafB19-like deaminase M1S41_10955 PF03167 Uracil DNA glycosylase superfamily M1S41_10965 PF03934 Type II secretion system (T2SS), protein K M1S41_10970 PF07963 Prokaryotic N-terminal methylation motif M1S41_10970 PF11612 Type II secretion system (T2SS), protein J M1S41_10975 PF07963 Prokaryotic N-terminal methylation motif M1S41_10975 PF02501 Type II secretion system (T2SS), protein I M1S41_10990 PF01026 TatD related DNase M1S41_11000 PF09115 DNA polymerase III, delta subunit, C terminal M1S41_11005 PF02348 Cytidylyltransferase M1S41_11010 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M1S41_11015 PF00664 ABC transporter transmembrane region M1S41_11015 PF00005 ABC transporter M1S41_11025 PF01618 MotA/TolQ/ExbB proton channel family M1S41_11030 PF17762 HTH domain found in ParB protein M1S41_11030 PF02195 ParB-like nuclease domain M1S41_11035 PF13614 AAA domain M1S41_11040 PF02527 rRNA small subunit methyltransferase G M1S41_11045 PF00483 Nucleotidyl transferase M1S41_11050 PF01636 Phosphotransferase enzyme family M1S41_11060 PF00639 PPIC-type PPIASE domain M1S41_11060 PF09312 SurA N-terminal domain M1S41_11065 PF01116 Fructose-bisphosphate aldolase class-II M1S41_11075 PF00162 Phosphoglycerate kinase M1S41_11085 PF02545 Maf-like protein M1S41_11090 PF08007 Cupin superfamily protein M1S41_11105 PF00375 Sodium:dicarboxylate symporter family M1S41_11110 PF06912 Protein of unknown function (DUF1275) M1S41_11115 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M1S41_11120 PF00005 ABC transporter M1S41_11120 PF00664 ABC transporter transmembrane region M1S41_11130 PF12833 Helix-turn-helix domain M1S41_11130 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S41_11135 PF01597 Glycine cleavage H-protein M1S41_11140 PF02146 Sir2 family M1S41_11145 PF00474 Sodium:solute symporter family M1S41_11150 PF01037 Lrp/AsnC ligand binding domain M1S41_11155 PF01619 Proline dehydrogenase M1S41_11155 PF00171 Aldehyde dehydrogenase family M1S41_11155 PF14850 DNA-binding domain of Proline dehydrogenase M1S41_11155 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M1S41_11160 PF04229 GrpB protein M1S41_11165 PF05958 tRNA (Uracil-5-)-methyltransferase M1S41_11175 PF09992 Phosphodiester glycosidase M1S41_11185 PF04264 YceI-like domain M1S41_11195 PF02779 Transketolase, pyrimidine binding domain M1S41_11195 PF00456 Transketolase, thiamine diphosphate binding domain M1S41_11195 PF02780 Transketolase, C-terminal domain M1S41_11225 PF00905 Penicillin binding protein transpeptidase domain M1S41_11240 PF02075 Crossover junction endodeoxyribonuclease RuvC M1S41_11245 PF03853 YjeF-related protein N-terminus M1S41_11245 PF01256 Carbohydrate kinase M1S41_11250 PF08331 Domain of unknown function (DUF1730) M1S41_11255 PF04055 Radical SAM superfamily M1S41_11255 PF06968 Biotin and Thiamin Synthesis associated domain M1S41_11270 PF16970 Type-1 fimbrial protein, A M1S41_11275 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S41_11275 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S41_11280 PF13954 PapC N-terminal domain M1S41_11280 PF13953 PapC C-terminal domain M1S41_11280 PF00577 Outer membrane usher protein M1S41_11300 PF00892 EamA-like transporter family M1S41_11310 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S41_11320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_11320 PF03466 LysR substrate binding domain M1S41_11340 PF00440 Bacterial regulatory proteins, tetR family M1S41_11350 PF01709 Transcriptional regulator M1S41_11355 PF01037 Lrp/AsnC ligand binding domain M1S41_11365 PF00005 ABC transporter M1S41_11370 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_11375 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_11390 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S41_11390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_11400 PF00296 Luciferase-like monooxygenase M1S41_11405 PF03180 NLPA lipoprotein M1S41_11410 PF03180 NLPA lipoprotein M1S41_11415 PF00005 ABC transporter M1S41_11415 PF09383 NIL domain M1S41_11420 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_11425 PF01926 50S ribosome-binding GTPase M1S41_11425 PF06071 Protein of unknown function (DUF933) M1S41_11450 PF03591 AzlC protein M1S41_11455 PF05437 Branched-chain amino acid transport protein (AzlD) M1S41_11465 PF02222 ATP-grasp domain M1S41_11470 PF01909 Nucleotidyltransferase domain M1S41_11470 PF01966 HD domain M1S41_11470 PF08335 GlnD PII-uridylyltransferase M1S41_11475 PF00155 Aminotransferase class I and II M1S41_11485 PF12833 Helix-turn-helix domain M1S41_11485 PF12852 Cupin M1S41_11490 PF00255 Glutathione peroxidase M1S41_11495 PF01641 SelR domain M1S41_11500 PF00155 Aminotransferase class I and II M1S41_11505 PF00375 Sodium:dicarboxylate symporter family M1S41_11510 PF00710 Asparaginase, N-terminal M1S41_11510 PF17763 Glutaminase/Asparaginase C-terminal domain M1S41_11515 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S41_11515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S41_11515 PF14579 Helix-hairpin-helix motif M1S41_11515 PF02811 PHP domain M1S41_11515 PF01336 OB-fold nucleic acid binding domain M1S41_11520 PF00588 SpoU rRNA Methylase family M1S41_11525 PF00132 Bacterial transferase hexapeptide (six repeats) M1S41_11555 PF03466 LysR substrate binding domain M1S41_11555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_11560 PF01758 Sodium Bile acid symporter family M1S41_11565 PF01022 Bacterial regulatory protein, arsR family M1S41_11570 PF03960 ArsC family M1S41_11580 PF01979 Amidohydrolase family M1S41_11580 PF13382 Adenine deaminase C-terminal domain M1S41_11590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_11590 PF03466 LysR substrate binding domain M1S41_11600 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S41_11605 PF01177 Asp/Glu/Hydantoin racemase M1S41_11610 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M1S41_11615 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_11620 PF00005 ABC transporter M1S41_11625 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S41_11635 PF00083 Sugar (and other) transporter M1S41_11640 PF00296 Luciferase-like monooxygenase M1S41_11645 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_11645 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S41_11645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_11655 PF01654 Cytochrome bd terminal oxidase subunit I M1S41_11660 PF02322 Cytochrome bd terminal oxidase subunit II M1S41_11670 PF00392 Bacterial regulatory proteins, gntR family M1S41_11670 PF00155 Aminotransferase class I and II M1S41_11675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_11675 PF03466 LysR substrate binding domain M1S41_11690 PF00698 Acyl transferase domain M1S41_11695 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M1S41_11705 PF01039 Carboxyl transferase domain M1S41_11710 PF06857 Malonate decarboxylase delta subunit (MdcD) M1S41_11715 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M1S41_11720 PF16957 Malonate decarboxylase, alpha subunit, transporter M1S41_11725 PF07690 Major Facilitator Superfamily M1S41_11740 PF00155 Aminotransferase class I and II M1S41_11740 PF00392 Bacterial regulatory proteins, gntR family M1S41_11745 PF04172 LrgB-like family M1S41_11750 PF03788 LrgA family M1S41_11755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_11755 PF03466 LysR substrate binding domain M1S41_11760 PF14834 Glutathione S-transferase, C-terminal domain M1S41_11760 PF02798 Glutathione S-transferase, N-terminal domain M1S41_11765 PF02798 Glutathione S-transferase, N-terminal domain M1S41_11770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_11770 PF03466 LysR substrate binding domain M1S41_11780 PF00581 Rhodanese-like domain M1S41_11785 PF00132 Bacterial transferase hexapeptide (six repeats) M1S41_11795 PF00266 Aminotransferase class-V M1S41_11805 PF01810 LysE type translocator M1S41_11810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_11810 PF03466 LysR substrate binding domain M1S41_11820 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S41_11825 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S41_11830 PF00005 ABC transporter M1S41_11835 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_11840 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_11855 PF00072 Response regulator receiver domain M1S41_11880 PF01037 Lrp/AsnC ligand binding domain M1S41_11880 PF13404 AsnC-type helix-turn-helix domain M1S41_11890 PF00717 Peptidase S24-like M1S41_11915 PF18011 C-terminal domain found in long catalases M1S41_11915 PF00199 Catalase M1S41_11915 PF06628 Catalase-related immune-responsive M1S41_11925 PF02464 Competence-damaged protein M1S41_11925 PF18146 Damage-inducible protein CinA KH domain M1S41_11925 PF00994 Probable molybdopterin binding domain M1S41_11960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_11960 PF03466 LysR substrate binding domain M1S41_11980 PF00501 AMP-binding enzyme M1S41_11980 PF13193 AMP-binding enzyme C-terminal domain M1S41_11985 PF00440 Bacterial regulatory proteins, tetR family M1S41_11990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_11990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_11990 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_11995 PF01039 Carboxyl transferase domain M1S41_12000 PF00378 Enoyl-CoA hydratase/isomerase M1S41_12005 PF18140 Propionyl-coenzyme A carboxylase BT domain M1S41_12005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S41_12005 PF00364 Biotin-requiring enzyme M1S41_12005 PF00289 Biotin carboxylase, N-terminal domain M1S41_12005 PF02785 Biotin carboxylase C-terminal domain M1S41_12010 PF00682 HMGL-like M1S41_12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_12015 PF03466 LysR substrate binding domain M1S41_12030 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S41_12030 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_12030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_12030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_12040 PF07690 Major Facilitator Superfamily M1S41_12050 PF01144 Coenzyme A transferase M1S41_12055 PF01144 Coenzyme A transferase M1S41_12060 PF07690 Major Facilitator Superfamily M1S41_12065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_12065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_12065 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_12070 PF00378 Enoyl-CoA hydratase/isomerase M1S41_12080 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S41_12080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S41_12080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S41_12085 PF00108 Thiolase, N-terminal domain M1S41_12085 PF02803 Thiolase, C-terminal domain M1S41_12090 PF09339 IclR helix-turn-helix domain M1S41_12095 PF07690 Major Facilitator Superfamily M1S41_12100 PF03060 Nitronate monooxygenase M1S41_12105 PF00378 Enoyl-CoA hydratase/isomerase M1S41_12110 PF09339 IclR helix-turn-helix domain M1S41_12115 PF02515 CoA-transferase family III M1S41_12120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_12120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_12120 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_12125 PF07690 Major Facilitator Superfamily M1S41_12130 PF13419 Haloacid dehalogenase-like hydrolase M1S41_12135 PF00266 Aminotransferase class-V M1S41_12140 PF01266 FAD dependent oxidoreductase M1S41_12145 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_12150 PF08402 TOBE domain M1S41_12150 PF00005 ABC transporter M1S41_12160 PF07702 UTRA domain M1S41_12160 PF00392 Bacterial regulatory proteins, gntR family M1S41_12165 PF01494 FAD binding domain M1S41_12170 PF01614 Bacterial transcriptional regulator M1S41_12170 PF09339 IclR helix-turn-helix domain M1S41_12175 PF02525 Flavodoxin-like fold M1S41_12180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_12180 PF03466 LysR substrate binding domain M1S41_12185 PF02627 Carboxymuconolactone decarboxylase family M1S41_12190 PF00171 Aldehyde dehydrogenase family M1S41_12200 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S41_12210 PF00171 Aldehyde dehydrogenase family M1S41_12215 PF00296 Luciferase-like monooxygenase M1S41_12220 PF01613 Flavin reductase like domain M1S41_12225 PF12697 Alpha/beta hydrolase family M1S41_12245 PF01292 Prokaryotic cytochrome b561 M1S41_12250 PF00199 Catalase M1S41_12285 PF03061 Thioesterase superfamily M1S41_12290 PF00132 Bacterial transferase hexapeptide (six repeats) M1S41_12295 PF08223 PaaX-like protein C-terminal domain M1S41_12295 PF07848 PaaX-like protein M1S41_12300 PF14535 AMP-binding enzyme C-terminal domain M1S41_12300 PF00501 AMP-binding enzyme M1S41_12305 PF02803 Thiolase, C-terminal domain M1S41_12305 PF00108 Thiolase, N-terminal domain M1S41_12310 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S41_12310 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S41_12310 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S41_12315 PF00378 Enoyl-CoA hydratase/isomerase M1S41_12320 PF00378 Enoyl-CoA hydratase/isomerase M1S41_12325 PF00970 Oxidoreductase FAD-binding domain M1S41_12325 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S41_12325 PF00175 Oxidoreductase NAD-binding domain M1S41_12330 PF01883 Iron-sulfur cluster assembly protein M1S41_12335 PF05138 Phenylacetic acid catabolic protein M1S41_12340 PF06243 Phenylacetic acid degradation B M1S41_12345 PF05138 Phenylacetic acid catabolic protein M1S41_12350 PF01575 MaoC like domain M1S41_12350 PF00171 Aldehyde dehydrogenase family M1S41_12360 PF13520 Amino acid permease M1S41_12365 PF00171 Aldehyde dehydrogenase family M1S41_12370 PF00083 Sugar (and other) transporter M1S41_12380 PF04324 BFD-like [2Fe-2S] binding domain M1S41_12380 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_12390 PF01266 FAD dependent oxidoreductase M1S41_12395 PF05544 Proline racemase M1S41_12410 PF00701 Dihydrodipicolinate synthetase family M1S41_12420 PF00376 MerR family regulatory protein M1S41_12420 PF09278 MerR, DNA binding M1S41_12435 PF02677 Epoxyqueuosine reductase QueH M1S41_12450 PF07690 Major Facilitator Superfamily M1S41_12455 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S41_12465 PF03466 LysR substrate binding domain M1S41_12465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_12485 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M1S41_12490 PF06812 ImpA, N-terminal, type VI secretion system M1S41_12495 PF07724 AAA domain (Cdc48 subfamily) M1S41_12495 PF00004 ATPase family associated with various cellular activities (AAA) M1S41_12495 PF17871 AAA lid domain M1S41_12495 PF10431 C-terminal, D2-small domain, of ClpB protein M1S41_12510 PF01389 OmpA-like transmembrane domain M1S41_12510 PF00691 OmpA family M1S41_12520 PF14331 ImcF-related N-terminal domain M1S41_12520 PF06761 Intracellular multiplication and human macrophage-killing M1S41_12520 PF06744 Type VI secretion protein IcmF C-terminal M1S41_12535 PF05947 Type VI secretion system, TssF M1S41_12550 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M1S41_12575 PF00005 ABC transporter M1S41_12580 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S41_12585 PF01425 Amidase M1S41_12590 PF08753 NikR C terminal nickel binding domain M1S41_12590 PF01402 Ribbon-helix-helix protein, copG family M1S41_12610 PF02525 Flavodoxin-like fold M1S41_12615 PF02785 Biotin carboxylase C-terminal domain M1S41_12615 PF00289 Biotin carboxylase, N-terminal domain M1S41_12615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S41_12630 PF08240 Alcohol dehydrogenase GroES-like domain M1S41_12630 PF13823 Alcohol dehydrogenase GroES-associated M1S41_12630 PF00107 Zinc-binding dehydrogenase M1S41_12640 PF00440 Bacterial regulatory proteins, tetR family M1S41_12660 PF00654 Voltage gated chloride channel M1S41_12665 PF00289 Biotin carboxylase, N-terminal domain M1S41_12665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S41_12665 PF00364 Biotin-requiring enzyme M1S41_12665 PF02785 Biotin carboxylase C-terminal domain M1S41_12675 PF07286 Protein of unknown function (DUF1445) M1S41_12680 PF03746 LamB/YcsF family M1S41_12685 PF01566 Natural resistance-associated macrophage protein M1S41_12690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_12690 PF03466 LysR substrate binding domain M1S41_12705 PF05593 RHS Repeat M1S41_12705 PF03527 RHS protein M1S41_12710 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S41_12710 PF04717 Type VI secretion system, phage-baseplate injector M1S41_12710 PF13296 Putative type VI secretion system Rhs element Vgr M1S41_12720 PF13419 Haloacid dehalogenase-like hydrolase M1S41_12740 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S41_12740 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S41_12760 PF07690 Major Facilitator Superfamily M1S41_12775 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S41_12780 PF00990 Diguanylate cyclase, GGDEF domain M1S41_12780 PF03707 Bacterial signalling protein N terminal repeat M1S41_12780 PF00563 EAL domain M1S41_12785 PF00892 EamA-like transporter family M1S41_12790 PF01037 Lrp/AsnC ligand binding domain M1S41_12795 PF01624 MutS domain I M1S41_12795 PF05188 MutS domain II M1S41_12795 PF00488 MutS domain V M1S41_12795 PF05190 MutS family domain IV M1S41_12795 PF05192 MutS domain III M1S41_12805 PF11953 Domain of unknown function (DUF3470) M1S41_12805 PF00037 4Fe-4S binding domain M1S41_12815 PF01596 O-methyltransferase M1S41_12825 PF00132 Bacterial transferase hexapeptide (six repeats) M1S41_12830 PF01205 Uncharacterized protein family UPF0029 M1S41_12840 PF00664 ABC transporter transmembrane region M1S41_12840 PF00005 ABC transporter M1S41_12840 PF03412 Peptidase C39 family M1S41_12845 PF02321 Outer membrane efflux protein M1S41_12850 PF00005 ABC transporter M1S41_12850 PF12399 Branched-chain amino acid ATP-binding cassette transporter M1S41_12855 PF03968 OstA-like protein M1S41_12870 PF01380 SIS domain M1S41_12870 PF00571 CBS domain M1S41_12875 PF01406 tRNA synthetases class I (C) catalytic domain M1S41_12875 PF09190 DALR domain M1S41_12900 PF01638 HxlR-like helix-turn-helix M1S41_12905 PF07690 Major Facilitator Superfamily M1S41_12930 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S41_12930 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S41_12940 PF00313 'Cold-shock' DNA-binding domain M1S41_12945 PF01810 LysE type translocator M1S41_12975 PF13742 OB-fold nucleic acid binding domain M1S41_12975 PF02601 Exonuclease VII, large subunit M1S41_13010 PF09278 MerR, DNA binding M1S41_13010 PF00376 MerR family regulatory protein M1S41_13015 PF00403 Heavy-metal-associated domain M1S41_13020 PF00403 Heavy-metal-associated domain M1S41_13025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_13025 PF03466 LysR substrate binding domain M1S41_13035 PF00355 Rieske [2Fe-2S] domain M1S41_13035 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S41_13040 PF00866 Ring hydroxylating beta subunit M1S41_13045 PF00970 Oxidoreductase FAD-binding domain M1S41_13045 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S41_13045 PF00175 Oxidoreductase NAD-binding domain M1S41_13050 PF00106 short chain dehydrogenase M1S41_13055 PF03594 Benzoate membrane transport protein M1S41_13060 PF07690 Major Facilitator Superfamily M1S41_13070 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M1S41_13070 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M1S41_13075 PF00270 DEAD/DEAH box helicase M1S41_13075 PF11898 Domain of unknown function (DUF3418) M1S41_13075 PF04408 Helicase associated domain (HA2) M1S41_13075 PF00271 Helicase conserved C-terminal domain M1S41_13075 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M1S41_13080 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S41_13080 PF00578 AhpC/TSA family M1S41_13110 PF02798 Glutathione S-transferase, N-terminal domain M1S41_13110 PF00043 Glutathione S-transferase, C-terminal domain M1S41_13120 PF02390 Putative methyltransferase M1S41_13125 PF00043 Glutathione S-transferase, C-terminal domain M1S41_13125 PF13417 Glutathione S-transferase, N-terminal domain M1S41_13135 PF13488 Glycine zipper M1S41_13135 PF00691 OmpA family M1S41_13140 PF01979 Amidohydrolase family M1S41_13145 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S41_13145 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S41_13155 PF10672 S-adenosylmethionine-dependent methyltransferase M1S41_13155 PF02926 THUMP domain M1S41_13155 PF01170 Putative RNA methylase family UPF0020 M1S41_13170 PF17871 AAA lid domain M1S41_13170 PF00004 ATPase family associated with various cellular activities (AAA) M1S41_13170 PF10431 C-terminal, D2-small domain, of ClpB protein M1S41_13170 PF02861 Clp amino terminal domain, pathogenicity island component M1S41_13170 PF07724 AAA domain (Cdc48 subfamily) M1S41_13185 PF02566 OsmC-like protein M1S41_13195 PF13545 Crp-like helix-turn-helix domain M1S41_13195 PF00027 Cyclic nucleotide-binding domain M1S41_13205 PF00248 Aldo/keto reductase family M1S41_13220 PF00709 Adenylosuccinate synthetase M1S41_13225 PF13393 Histidyl-tRNA synthetase M1S41_13230 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S41_13230 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S41_13235 PF02272 DHHA1 domain M1S41_13235 PF01411 tRNA synthetases class II (A) M1S41_13235 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S41_13240 PF13840 ACT domain M1S41_13240 PF01842 ACT domain M1S41_13240 PF00696 Amino acid kinase family M1S41_13245 PF02599 Global regulator protein family M1S41_13250 PF01351 Ribonuclease HII M1S41_13260 PF01292 Prokaryotic cytochrome b561 M1S41_13265 PF00962 Adenosine/AMP deaminase M1S41_13270 PF00860 Permease family M1S41_13280 PF00743 Flavin-binding monooxygenase-like M1S41_13285 PF00106 short chain dehydrogenase M1S41_13295 PF17954 Quercetinase C-terminal cupin domain M1S41_13295 PF02678 Pirin M1S41_13300 PF00440 Bacterial regulatory proteins, tetR family M1S41_13300 PF17932 Tetracyclin repressor-like, C-terminal domain M1S41_13310 PF00106 short chain dehydrogenase M1S41_13325 PF13610 DDE domain M1S41_13330 PF01636 Phosphotransferase enzyme family M1S41_13350 PF00239 Resolvase, N terminal domain M1S41_13350 PF02796 Helix-turn-helix domain of resolvase M1S41_13370 PF00239 Resolvase, N terminal domain M1S41_13370 PF02796 Helix-turn-helix domain of resolvase M1S41_13375 PF13610 DDE domain M1S41_13385 PF04958 Arginine N-succinyltransferase beta subunit M1S41_13390 PF00202 Aminotransferase class-III M1S41_13400 PF00171 Aldehyde dehydrogenase family M1S41_13410 PF07729 FCD domain M1S41_13410 PF00392 Bacterial regulatory proteins, gntR family M1S41_13420 PF00324 Amino acid permease M1S41_13425 PF01266 FAD dependent oxidoreductase M1S41_13430 PF00324 Amino acid permease M1S41_13470 PF05593 RHS Repeat M1S41_13470 PF03527 RHS protein M1S41_13475 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S41_13475 PF04717 Type VI secretion system, phage-baseplate injector M1S41_13475 PF13296 Putative type VI secretion system Rhs element Vgr M1S41_13495 PF03180 NLPA lipoprotein M1S41_13500 PF05987 Bacterial protein of unknown function (DUF898) M1S41_13515 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_13515 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S41_13520 PF00764 Arginosuccinate synthase M1S41_13525 PF00990 Diguanylate cyclase, GGDEF domain M1S41_13525 PF01590 GAF domain M1S41_13525 PF00563 EAL domain M1S41_13525 PF00360 Phytochrome region M1S41_13530 PF01979 Amidohydrolase family M1S41_13535 PF00929 Exonuclease M1S41_13545 PF07715 TonB-dependent Receptor Plug Domain M1S41_13545 PF00593 TonB dependent receptor M1S41_13550 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_13550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S41_13555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S41_13555 PF00005 ABC transporter M1S41_13560 PF12911 N-terminal TM domain of oligopeptide transport permease C M1S41_13560 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_13565 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_13570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1S41_13575 PF01464 Transglycosylase SLT domain M1S41_13575 PF01476 LysM domain M1S41_13575 PF01464 Transglycosylase SLT domain M1S41_13575 PF01476 LysM domain M1S41_13580 PF00929 Exonuclease M1S41_13590 PF09297 NADH pyrophosphatase zinc ribbon domain M1S41_13590 PF00293 NUDIX domain M1S41_13600 PF04972 BON domain M1S41_13605 PF02021 Uncharacterised protein family UPF0102 M1S41_13610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S41_13620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_13620 PF03466 LysR substrate binding domain M1S41_13625 PF01810 LysE type translocator M1S41_13635 PF13411 MerR HTH family regulatory protein M1S41_13645 PF01494 FAD binding domain M1S41_13655 PF00557 Metallopeptidase family M24 M1S41_13655 PF05195 Aminopeptidase P, N-terminal domain M1S41_13740 PF01476 LysM domain M1S41_13740 PF08525 Opacity-associated protein A N-terminal motif M1S41_13740 PF01551 Peptidase family M23 M1S41_14065 PF01812 5-formyltetrahydrofolate cyclo-ligase family M1S41_14070 PF00691 OmpA family M1S41_14070 PF04355 SmpA / OmlA family M1S41_14075 PF13018 Extended Signal Peptide of Type V secretion system M1S41_14075 PF03895 YadA-like membrane anchor domain M1S41_14075 PF05658 Head domain of trimeric autotransporter adhesin M1S41_14075 PF05662 Coiled stalk of trimeric autotransporter adhesin M1S41_14080 PF02190 ATP-dependent protease La (LON) substrate-binding domain M1S41_14080 PF00004 ATPase family associated with various cellular activities (AAA) M1S41_14080 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S41_14085 PF02590 Predicted SPOUT methyltransferase M1S41_14090 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M1S41_14100 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S41_14100 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S41_14105 PF04060 Putative Fe-S cluster M1S41_14110 PF10576 Iron-sulfur binding domain of endonuclease III M1S41_14110 PF00633 Helix-hairpin-helix motif M1S41_14110 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S41_14120 PF05191 Adenylate kinase, active site lid M1S41_14135 PF03717 Penicillin-binding Protein dimerisation domain M1S41_14135 PF00905 Penicillin binding protein transpeptidase domain M1S41_14150 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S41_14155 PF01730 UreF M1S41_14160 PF05194 UreE urease accessory protein, C-terminal domain M1S41_14160 PF02814 UreE urease accessory protein, N-terminal domain M1S41_14165 PF01979 Amidohydrolase family M1S41_14165 PF00449 Urease alpha-subunit, N-terminal domain M1S41_14170 PF00699 Urease beta subunit M1S41_14175 PF00547 Urease, gamma subunit M1S41_14180 PF01774 UreD urease accessory protein M1S41_14195 PF00463 Isocitrate lyase family M1S41_14200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_14200 PF03466 LysR substrate binding domain M1S41_14205 PF01595 Cyclin M transmembrane N-terminal domain M1S41_14205 PF03471 Transporter associated domain M1S41_14205 PF00571 CBS domain M1S41_14210 PF03600 Citrate transporter M1S41_14225 PF00009 Elongation factor Tu GTP binding domain M1S41_14230 PF01507 Phosphoadenosine phosphosulfate reductase family M1S41_14240 PF14052 Capsule assembly protein Wzi M1S41_14245 PF00152 tRNA synthetases class II (D, K and N) M1S41_14245 PF01336 OB-fold nucleic acid binding domain M1S41_14260 PF00301 Rubredoxin M1S41_14265 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_14265 PF18113 Rubredoxin binding C-terminal domain M1S41_14270 PF00561 alpha/beta hydrolase fold M1S41_14275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_14275 PF03466 LysR substrate binding domain M1S41_14285 PF02503 Polyphosphate kinase middle domain M1S41_14285 PF13090 Polyphosphate kinase C-terminal domain 2 M1S41_14285 PF17941 Polyphosphate kinase C-terminal domain 1 M1S41_14285 PF13089 Polyphosphate kinase N-terminal domain M1S41_14290 PF00912 Transglycosylase M1S41_14295 PF01694 Rhomboid family M1S41_14305 PF00005 ABC transporter M1S41_14310 PF13472 GDSL-like Lipase/Acylhydrolase family M1S41_14315 PF00484 Carbonic anhydrase M1S41_14320 PF00561 alpha/beta hydrolase fold M1S41_14330 PF07715 TonB-dependent Receptor Plug Domain M1S41_14330 PF00593 TonB dependent receptor M1S41_14335 PF01521 Iron-sulphur cluster biosynthesis M1S41_14335 PF01106 NifU-like domain M1S41_14345 PF00884 Sulfatase M1S41_14350 PF03781 Sulfatase-modifying factor enzyme 1 M1S41_14365 PF00291 Pyridoxal-phosphate dependent enzyme M1S41_14370 PF01384 Phosphate transporter family M1S41_14375 PF02574 Homocysteine S-methyltransferase M1S41_14375 PF02310 B12 binding domain M1S41_14375 PF02607 B12 binding domain M1S41_14375 PF02965 Vitamin B12 dependent methionine synthase, activation domain M1S41_14375 PF00809 Pterin binding enzyme M1S41_14380 PF02780 Transketolase, C-terminal domain M1S41_14380 PF02779 Transketolase, pyrimidine binding domain M1S41_14385 PF00456 Transketolase, thiamine diphosphate binding domain M1S41_14390 PF07690 Major Facilitator Superfamily M1S41_14400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_14400 PF03466 LysR substrate binding domain M1S41_14410 PF01263 Aldose 1-epimerase M1S41_14415 PF07690 Major Facilitator Superfamily M1S41_14420 PF02311 AraC-like ligand binding domain M1S41_14420 PF12833 Helix-turn-helix domain M1S41_14425 PF04960 Glutaminase M1S41_14430 PF01327 Polypeptide deformylase M1S41_14435 PF07690 Major Facilitator Superfamily M1S41_14445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S41_14445 PF00205 Thiamine pyrophosphate enzyme, central domain M1S41_14445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S41_14450 PF00171 Aldehyde dehydrogenase family M1S41_14455 PF01958 Domain of unknown function DUF108 M1S41_14455 PF03447 Homoserine dehydrogenase, NAD binding domain M1S41_14465 PF12697 Alpha/beta hydrolase family M1S41_14475 PF07690 Major Facilitator Superfamily M1S41_14480 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_14480 PF14759 Reductase C-terminal M1S41_14485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S41_14495 PF00355 Rieske [2Fe-2S] domain M1S41_14505 PF00355 Rieske [2Fe-2S] domain M1S41_14510 PF09339 IclR helix-turn-helix domain M1S41_14510 PF01614 Bacterial transcriptional regulator M1S41_14525 PF00378 Enoyl-CoA hydratase/isomerase M1S41_14535 PF00535 Glycosyl transferase family 2 M1S41_14540 PF14883 Hypothetical glycosyl hydrolase family 13 M1S41_14540 PF01522 Polysaccharide deacetylase M1S41_14545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S41_14550 PF07152 YaeQ protein M1S41_14555 PF00375 Sodium:dicarboxylate symporter family M1S41_14560 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S41_14560 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S41_14570 PF03061 Thioesterase superfamily M1S41_14580 PF02028 BCCT, betaine/carnitine/choline family transporter M1S41_14585 PF02028 BCCT, betaine/carnitine/choline family transporter M1S41_14590 PF13977 BetI-type transcriptional repressor, C-terminal M1S41_14590 PF00440 Bacterial regulatory proteins, tetR family M1S41_14595 PF00171 Aldehyde dehydrogenase family M1S41_14600 PF00732 GMC oxidoreductase M1S41_14600 PF05199 GMC oxidoreductase M1S41_14605 PF06039 Malate:quinone oxidoreductase (Mqo) M1S41_14615 PF02574 Homocysteine S-methyltransferase M1S41_14620 PF13520 Amino acid permease M1S41_14645 PF00701 Dihydrodipicolinate synthetase family M1S41_14650 PF00083 Sugar (and other) transporter M1S41_14720 PF10544 T5orf172 domain M1S41_14725 PF13614 AAA domain M1S41_14775 PF10544 T5orf172 domain M1S41_14780 PF10544 T5orf172 domain M1S41_14790 PF13614 AAA domain M1S41_14815 PF00905 Penicillin binding protein transpeptidase domain M1S41_14895 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S41_14895 PF02767 DNA polymerase III beta subunit, central domain M1S41_14895 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S41_14935 PF05016 ParE toxin of type II toxin-antitoxin system, parDE M1S41_15085 PF07007 Lysozyme inhibitor LprI M1S41_15130 PF01695 IstB-like ATP binding protein M1S41_15140 PF00145 C-5 cytosine-specific DNA methylase M1S41_15185 PF00717 Peptidase S24-like M1S41_15185 PF01381 Helix-turn-helix M1S41_15220 PF00929 Exonuclease M1S41_15295 PF07690 Major Facilitator Superfamily M1S41_15300 PF13533 Biotin-lipoyl like M1S41_15305 PF03061 Thioesterase superfamily M1S41_15310 PF00490 Delta-aminolevulinic acid dehydratase M1S41_15315 PF01266 FAD dependent oxidoreductase M1S41_15320 PF08338 Domain of unknown function (DUF1731) M1S41_15320 PF01370 NAD dependent epimerase/dehydratase family M1S41_15340 PF00149 Calcineurin-like phosphoesterase M1S41_15340 PF12320 Type 5 capsule protein repressor C-terminal domain M1S41_15350 PF01168 Alanine racemase, N-terminal domain M1S41_15355 PF00437 Type II/IV secretion system protein M1S41_15360 PF00437 Type II/IV secretion system protein M1S41_15365 PF01475 Ferric uptake regulator family M1S41_15370 PF04355 SmpA / OmlA family M1S41_15375 PF03658 RnfH family Ubiquitin M1S41_15385 PF01814 Hemerythrin HHE cation binding domain M1S41_15390 PF13230 Glutamine amidotransferases class-II M1S41_15400 PF00696 Amino acid kinase family M1S41_15405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S41_15405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S41_15405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S41_15405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S41_15410 PF00692 dUTPase M1S41_15415 PF00580 UvrD/REP helicase N-terminal domain M1S41_15415 PF13361 UvrD-like helicase C-terminal domain M1S41_15420 PF00691 OmpA family M1S41_15420 PF13488 Glycine zipper M1S41_15425 PF01553 Acyltransferase M1S41_15435 PF03775 Septum formation inhibitor MinC, C-terminal domain M1S41_15440 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M1S41_15445 PF03776 Septum formation topological specificity factor MinE M1S41_15460 PF01810 LysE type translocator M1S41_15465 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M1S41_15465 PF09397 Ftsk gamma domain M1S41_15465 PF01580 FtsK/SpoIIIE family M1S41_15465 PF17854 FtsK alpha domain M1S41_15470 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S41_15475 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M1S41_15480 PF04377 Arginine-tRNA-protein transferase, C terminus M1S41_15480 PF04376 Arginine-tRNA-protein transferase, N terminus M1S41_15485 PF00583 Acetyltransferase (GNAT) family M1S41_15500 PF00009 Elongation factor Tu GTP binding domain M1S41_15500 PF03144 Elongation factor Tu domain 2 M1S41_15500 PF03143 Elongation factor Tu C-terminal domain M1S41_15505 PF00679 Elongation factor G C-terminus M1S41_15505 PF03764 Elongation factor G, domain IV M1S41_15505 PF00009 Elongation factor Tu GTP binding domain M1S41_15505 PF03144 Elongation factor Tu domain 2 M1S41_15505 PF14492 Elongation Factor G, domain II M1S41_15510 PF00177 Ribosomal protein S7p/S5e M1S41_15515 PF00164 Ribosomal protein S12/S23 M1S41_15525 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S41_15525 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S41_15530 PF03653 Uncharacterised protein family (UPF0093) M1S41_15535 PF02678 Pirin M1S41_15535 PF05726 Pirin C-terminal cupin domain M1S41_15545 PF02540 NAD synthase M1S41_15545 PF00795 Carbon-nitrogen hydrolase M1S41_15560 PF00175 Oxidoreductase NAD-binding domain M1S41_15560 PF00970 Oxidoreductase FAD-binding domain M1S41_15560 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S41_15565 PF00171 Aldehyde dehydrogenase family M1S41_15570 PF00355 Rieske [2Fe-2S] domain M1S41_15570 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S41_15575 PF07859 alpha/beta hydrolase fold M1S41_15580 PF02028 BCCT, betaine/carnitine/choline family transporter M1S41_15585 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S41_15590 PF03466 LysR substrate binding domain M1S41_15590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_15610 PF00037 4Fe-4S binding domain M1S41_15615 PF01467 Cytidylyltransferase-like M1S41_15620 PF01668 SmpB protein M1S41_15625 PF03358 NADPH-dependent FMN reductase M1S41_15630 PF02578 Multi-copper polyphenol oxidoreductase laccase M1S41_15635 PF01479 S4 domain M1S41_15635 PF00849 RNA pseudouridylate synthase M1S41_15640 PF13525 Outer membrane lipoprotein M1S41_15645 PF08278 DNA primase DnaG DnaB-binding M1S41_15645 PF08275 DNA primase catalytic core, N-terminal domain M1S41_15645 PF01807 CHC2 zinc finger M1S41_15645 PF10410 DnaB-helicase binding domain of primase M1S41_15650 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M1S41_15650 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M1S41_15650 PF01488 Shikimate / quinate 5-dehydrogenase M1S41_15660 PF03550 Outer membrane lipoprotein LolB M1S41_15665 PF00288 GHMP kinases N terminal domain M1S41_15665 PF08544 GHMP kinases C terminal M1S41_15690 PF14572 Phosphoribosyl synthetase-associated domain M1S41_15690 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S41_15695 PF01386 Ribosomal L25p family M1S41_15700 PF01195 Peptidyl-tRNA hydrolase M1S41_15705 PF02261 Aspartate decarboxylase M1S41_15720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S41_15730 PF08543 Phosphomethylpyrimidine kinase M1S41_15730 PF02581 Thiamine monophosphate synthase M1S41_15730 PF03070 TENA/THI-4/PQQC family M1S41_15735 PF04972 BON domain M1S41_15735 PF01476 LysM domain M1S41_15740 PF00550 Phosphopantetheine attachment site M1S41_15750 PF00698 Acyl transferase domain M1S41_15755 PF01783 Ribosomal L32p protein family M1S41_15760 PF02620 Large ribosomal RNA subunit accumulation protein YceD M1S41_15765 PF04315 Elongation factor P hydroxylase M1S41_15770 PF01300 Telomere recombination M1S41_15775 PF02616 Segregation and condensation protein ScpA M1S41_15780 PF04079 Segregation and condensation complex subunit ScpB M1S41_15785 PF00849 RNA pseudouridylate synthase M1S41_15785 PF01479 S4 domain M1S41_15800 PF00155 Aminotransferase class I and II M1S41_15805 PF00202 Aminotransferase class-III M1S41_15805 PF06968 Biotin and Thiamin Synthesis associated domain M1S41_15805 PF04055 Radical SAM superfamily M1S41_15810 PF12697 Alpha/beta hydrolase family M1S41_15810 PF08241 Methyltransferase domain M1S41_15815 PF02358 Trehalose-phosphatase M1S41_15820 PF00982 Glycosyltransferase family 20 M1S41_15825 PF07690 Major Facilitator Superfamily M1S41_15830 PF00210 Ferritin-like domain M1S41_15835 PF00533 BRCA1 C Terminus (BRCT) domain M1S41_15835 PF01653 NAD-dependent DNA ligase adenylation domain M1S41_15835 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M1S41_15835 PF12826 Helix-hairpin-helix motif M1S41_15835 PF03120 NAD-dependent DNA ligase OB-fold domain M1S41_15845 PF06470 SMC proteins Flexible Hinge Domain M1S41_15845 PF02463 RecF/RecN/SMC N terminal domain M1S41_15855 PF01925 Sulfite exporter TauE/SafE M1S41_15865 PF03309 Type III pantothenate kinase M1S41_15870 PF00448 SRP54-type protein, GTPase domain M1S41_15870 PF02881 SRP54-type protein, helical bundle domain M1S41_15870 PF02978 Signal peptide binding domain M1S41_15880 PF01207 Dihydrouridine synthase (Dus) M1S41_15910 PF00692 dUTPase M1S41_15925 PF01048 Phosphorylase superfamily M1S41_15930 PF10609 NUBPL iron-transfer P-loop NTPase M1S41_15940 PF09334 tRNA synthetases class I (M) M1S41_15940 PF01588 Putative tRNA binding domain M1S41_15965 PF13533 Biotin-lipoyl like M1S41_15970 PF00291 Pyridoxal-phosphate dependent enzyme M1S41_15985 PF05552 Conserved TM helix M1S41_16000 PF00970 Oxidoreductase FAD-binding domain M1S41_16000 PF00175 Oxidoreductase NAD-binding domain M1S41_16005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_16005 PF03466 LysR substrate binding domain M1S41_16010 PF00313 'Cold-shock' DNA-binding domain M1S41_16020 PF00361 Proton-conducting membrane transporter M1S41_16025 PF00361 Proton-conducting membrane transporter M1S41_16030 PF00361 Proton-conducting membrane transporter M1S41_16030 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S41_16035 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S41_16040 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M1S41_16045 PF12838 4Fe-4S dicluster domain M1S41_16050 PF00146 NADH dehydrogenase M1S41_16055 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S41_16055 PF00384 Molybdopterin oxidoreductase M1S41_16055 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M1S41_16060 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M1S41_16060 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M1S41_16060 PF10531 SLBB domain M1S41_16070 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M1S41_16070 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M1S41_16075 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M1S41_16080 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M1S41_16085 PF17151 Periplasmic sensor domain M1S41_16085 PF00990 Diguanylate cyclase, GGDEF domain M1S41_16095 PF00672 HAMP domain M1S41_16095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_16095 PF00512 His Kinase A (phospho-acceptor) domain M1S41_16100 PF00486 Transcriptional regulatory protein, C terminal M1S41_16100 PF00072 Response regulator receiver domain M1S41_16110 PF00317 Ribonucleotide reductase, all-alpha domain M1S41_16110 PF02867 Ribonucleotide reductase, barrel domain M1S41_16110 PF03477 ATP cone domain M1S41_16120 PF00268 Ribonucleotide reductase, small chain M1S41_16130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_16130 PF00512 His Kinase A (phospho-acceptor) domain M1S41_16130 PF13756 Stimulus-sensing domain M1S41_16130 PF13755 Sensor N-terminal transmembrane domain M1S41_16130 PF00672 HAMP domain M1S41_16200 PF01011 PQQ enzyme repeat M1S41_16200 PF13360 PQQ-like domain M1S41_16225 PF02567 Phenazine biosynthesis-like protein M1S41_16250 PF01613 Flavin reductase like domain M1S41_16255 PF08267 Cobalamin-independent synthase, N-terminal domain M1S41_16255 PF01717 Cobalamin-independent synthase, Catalytic domain M1S41_16265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_16265 PF03466 LysR substrate binding domain M1S41_16270 PF01810 LysE type translocator M1S41_16280 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S41_16280 PF12833 Helix-turn-helix domain M1S41_16285 PF01546 Peptidase family M20/M25/M40 M1S41_16285 PF07687 Peptidase dimerisation domain M1S41_16295 PF03466 LysR substrate binding domain M1S41_16295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_16300 PF07690 Major Facilitator Superfamily M1S41_16310 PF03466 LysR substrate binding domain M1S41_16310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_16315 PF14537 Cytochrome c3 M1S41_16315 PF00890 FAD binding domain M1S41_16325 PF02515 CoA-transferase family III M1S41_16330 PF07690 Major Facilitator Superfamily M1S41_16335 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_16335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_16335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_16340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_16340 PF03466 LysR substrate binding domain M1S41_16345 PF00107 Zinc-binding dehydrogenase M1S41_16345 PF08240 Alcohol dehydrogenase GroES-like domain M1S41_16350 PF00962 Adenosine/AMP deaminase M1S41_16375 PF02445 Quinolinate synthetase A protein M1S41_16380 PF01960 ArgJ family M1S41_16385 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S41_16385 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S41_16390 PF00893 Small Multidrug Resistance protein M1S41_16400 PF05275 Copper resistance protein B precursor (CopB) M1S41_16405 PF00394 Multicopper oxidase M1S41_16405 PF07731 Multicopper oxidase M1S41_16405 PF07732 Multicopper oxidase M1S41_16420 PF00834 Ribulose-phosphate 3 epimerase family M1S41_16430 PF00756 Putative esterase M1S41_16440 PF04445 Putative SAM-dependent methyltransferase M1S41_16445 PF00814 Glycoprotease family M1S41_16450 PF00132 Bacterial transferase hexapeptide (six repeats) M1S41_16455 PF00293 NUDIX domain M1S41_16495 PF04715 Anthranilate synthase component I, N terminal region M1S41_16495 PF00425 chorismate binding enzyme M1S41_16500 PF00155 Aminotransferase class I and II M1S41_16505 PF00815 Histidinol dehydrogenase M1S41_16510 PF01634 ATP phosphoribosyltransferase M1S41_16515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S41_16520 PF01722 BolA-like protein M1S41_16525 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M1S41_16530 PF04963 Sigma-54 factor, core binding domain M1S41_16530 PF00309 Sigma-54 factor, Activator interacting domain (AID) M1S41_16530 PF04552 Sigma-54, DNA binding domain M1S41_16575 PF00795 Carbon-nitrogen hydrolase M1S41_16585 PF01047 MarR family M1S41_16590 PF02566 OsmC-like protein M1S41_16595 PF00437 Type II/IV secretion system protein M1S41_16615 PF00476 DNA polymerase family A M1S41_16615 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S41_16615 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S41_16615 PF01612 3'-5' exonuclease M1S41_16620 PF02325 YGGT family M1S41_16625 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S41_16625 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S41_16630 PF09179 TilS substrate binding domain M1S41_16630 PF11734 TilS substrate C-terminal domain M1S41_16630 PF01171 PP-loop family M1S41_16635 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M1S41_16640 PF02541 Ppx/GppA phosphatase family M1S41_16645 PF00085 Thioredoxin M1S41_16650 PF07498 Rho termination factor, N-terminal domain M1S41_16650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S41_16650 PF07497 Rho termination factor, RNA-binding domain M1S41_16665 PF00216 Bacterial DNA-binding protein M1S41_16670 PF03483 B3/4 domain M1S41_16670 PF03484 tRNA synthetase B5 domain M1S41_16670 PF03147 Ferredoxin-fold anticodon binding domain M1S41_16670 PF01588 Putative tRNA binding domain M1S41_16670 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M1S41_16675 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M1S41_16675 PF01409 tRNA synthetases class II core domain (F) M1S41_16695 PF00453 Ribosomal protein L20 M1S41_16700 PF01632 Ribosomal protein L35 M1S41_16715 PF09335 SNARE associated Golgi protein M1S41_16720 PF00043 Glutathione S-transferase, C-terminal domain M1S41_16720 PF02798 Glutathione S-transferase, N-terminal domain M1S41_16725 PF00707 Translation initiation factor IF-3, C-terminal domain M1S41_16725 PF05198 Translation initiation factor IF-3, N-terminal domain M1S41_16730 PF03129 Anticodon binding domain M1S41_16730 PF02824 TGS domain M1S41_16730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S41_16730 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S41_16735 PF00501 AMP-binding enzyme M1S41_16735 PF13193 AMP-binding enzyme C-terminal domain M1S41_16740 PF04751 Protein of unknown function (DUF615) M1S41_16745 PF00381 PTS HPr component phosphorylation site M1S41_16750 PF03668 P-loop ATPase protein family M1S41_16755 PF02569 Pantoate-beta-alanine ligase M1S41_16760 PF02548 Ketopantoate hydroxymethyltransferase M1S41_16765 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M1S41_16770 PF01743 Poly A polymerase head domain M1S41_16770 PF12626 Polymerase A arginine-rich C-terminus M1S41_16770 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S41_16780 PF03819 MazG nucleotide pyrophosphohydrolase domain M1S41_16790 PF13291 ACT domain M1S41_16790 PF04607 Region found in RelA / SpoT proteins M1S41_16790 PF02824 TGS domain M1S41_16795 PF05958 tRNA (Uracil-5-)-methyltransferase M1S41_16805 PF00291 Pyridoxal-phosphate dependent enzyme M1S41_16810 PF00672 HAMP domain M1S41_16810 PF00512 His Kinase A (phospho-acceptor) domain M1S41_16810 PF01627 Hpt domain M1S41_16810 PF00072 Response regulator receiver domain M1S41_16810 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M1S41_16810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_16815 PF00378 Enoyl-CoA hydratase/isomerase M1S41_16820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S41_16820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S41_16825 PF01261 Xylose isomerase-like TIM barrel M1S41_16835 PF00106 short chain dehydrogenase M1S41_16840 PF02233 NAD(P) transhydrogenase beta subunit M1S41_16845 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M1S41_16850 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M1S41_16850 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M1S41_16855 PF00892 EamA-like transporter family M1S41_16865 PF07690 Major Facilitator Superfamily M1S41_16870 PF01207 Dihydrouridine synthase (Dus) M1S41_16880 PF03466 LysR substrate binding domain M1S41_16880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_16890 PF00899 ThiF family M1S41_16900 PF00330 Aconitase family (aconitate hydratase) M1S41_16900 PF00694 Aconitase C-terminal domain M1S41_16905 PF01026 TatD related DNase M1S41_16920 PF00009 Elongation factor Tu GTP binding domain M1S41_16920 PF03144 Elongation factor Tu domain 2 M1S41_16920 PF16658 Class II release factor RF3, C-terminal domain M1S41_16940 PF03707 Bacterial signalling protein N terminal repeat M1S41_16940 PF00563 EAL domain M1S41_16940 PF00990 Diguanylate cyclase, GGDEF domain M1S41_16945 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M1S41_16945 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M1S41_16950 PF10369 Small subunit of acetolactate synthase M1S41_16955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S41_16955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S41_16955 PF00205 Thiamine pyrophosphate enzyme, central domain M1S41_16965 PF08264 Anticodon-binding domain of tRNA M1S41_16965 PF00133 tRNA synthetases class I (I, L, M and V) M1S41_16965 PF13603 Leucyl-tRNA synthetase, Domain 2 M1S41_16965 PF09334 tRNA synthetases class I (M) M1S41_16980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S41_16985 PF02687 FtsX-like permease family M1S41_16985 PF12704 MacB-like periplasmic core domain M1S41_16985 PF00005 ABC transporter M1S41_16990 PF02321 Outer membrane efflux protein M1S41_17005 PF00929 Exonuclease M1S41_17010 PF03193 RsgA GTPase M1S41_17020 PF00462 Glutaredoxin M1S41_17025 PF02556 Preprotein translocase subunit SecB M1S41_17040 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S41_17040 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S41_17055 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S41_17055 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S41_17065 PF04820 Tryptophan halogenase M1S41_17085 PF00221 Aromatic amino acid lyase M1S41_17100 PF00501 AMP-binding enzyme M1S41_17100 PF13193 AMP-binding enzyme C-terminal domain M1S41_17110 PF00550 Phosphopantetheine attachment site M1S41_17115 PF00550 Phosphopantetheine attachment site M1S41_17130 PF01926 50S ribosome-binding GTPase M1S41_17130 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M1S41_17135 PF13360 PQQ-like domain M1S41_17145 PF13393 Histidyl-tRNA synthetase M1S41_17145 PF03129 Anticodon binding domain M1S41_17150 PF04551 GcpE protein M1S41_17155 PF13464 Domain of unknown function (DUF4115) M1S41_17165 PF04055 Radical SAM superfamily M1S41_17170 PF00334 Nucleoside diphosphate kinase M1S41_17175 PF04384 Iron-sulphur cluster assembly M1S41_17180 PF01569 PAP2 superfamily M1S41_17185 PF00534 Glycosyl transferases group 1 M1S41_17185 PF13439 Glycosyltransferase Family 4 M1S41_17190 PF03572 Peptidase family S41 M1S41_17190 PF00595 PDZ domain M1S41_17190 PF11818 C-terminal domain of tail specific protease (DUF3340) M1S41_17190 PF17804 Tail specific protease N-terminal domain M1S41_17195 PF00933 Glycosyl hydrolase family 3 N terminal domain M1S41_17205 PF00561 alpha/beta hydrolase fold M1S41_17210 PF00171 Aldehyde dehydrogenase family M1S41_17215 PF00171 Aldehyde dehydrogenase family M1S41_17220 PF01202 Shikimate kinase M1S41_17225 PF02447 GntP family permease M1S41_17230 PF01081 KDPG and KHG aldolase M1S41_17235 PF00920 Dehydratase family M1S41_17240 PF00871 Acetokinase family M1S41_17245 PF07085 DRTGG domain M1S41_17245 PF01515 Phosphate acetyl/butaryl transferase M1S41_17250 PF05681 Fumarate hydratase (Fumerase) M1S41_17250 PF05683 Fumarase C-terminus M1S41_17265 PF07724 AAA domain (Cdc48 subfamily) M1S41_17265 PF10431 C-terminal, D2-small domain, of ClpB protein M1S41_17265 PF06689 ClpX C4-type zinc finger M1S41_17270 PF00574 Clp protease M1S41_17275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S41_17275 PF05698 Bacterial trigger factor protein (TF) C-terminus M1S41_17275 PF05697 Bacterial trigger factor protein (TF) M1S41_17280 PF07715 TonB-dependent Receptor Plug Domain M1S41_17280 PF00593 TonB dependent receptor M1S41_17285 PF13640 2OG-Fe(II) oxygenase superfamily M1S41_17285 PF18331 PKHD-type hydroxylase C-terminal domain M1S41_17290 PF00682 HMGL-like M1S41_17290 PF08502 LeuA allosteric (dimerisation) domain M1S41_17295 PF00561 alpha/beta hydrolase fold M1S41_17300 PF00561 alpha/beta hydrolase fold M1S41_17300 PF07021 Methionine biosynthesis protein MetW M1S41_17310 PF01725 Ham1 family M1S41_17320 PF02416 mttA/Hcf106 family M1S41_17325 PF02416 mttA/Hcf106 family M1S41_17330 PF00902 Sec-independent protein translocase protein (TatC) M1S41_17350 PF01790 Prolipoprotein diacylglyceryl transferase M1S41_17365 PF00303 Thymidylate synthase M1S41_17370 PF00186 Dihydrofolate reductase M1S41_17380 PF01625 Peptide methionine sulfoxide reductase M1S41_17390 PF01618 MotA/TolQ/ExbB proton channel family M1S41_17400 PF00551 Formyl transferase M1S41_17400 PF01842 ACT domain M1S41_17410 PF00171 Aldehyde dehydrogenase family M1S41_17415 PF00830 Ribosomal L28 family M1S41_17420 PF00471 Ribosomal protein L33 M1S41_17425 PF00999 Sodium/hydrogen exchanger family M1S41_17425 PF02254 TrkA-N domain M1S41_17445 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) M1S41_17450 PF00580 UvrD/REP helicase N-terminal domain M1S41_17450 PF13361 UvrD-like helicase C-terminal domain M1S41_17465 PF08272 Topoisomerase I zinc-ribbon-like M1S41_17465 PF01131 DNA topoisomerase M1S41_17465 PF01751 Toprim domain M1S41_17465 PF01396 Topoisomerase DNA binding C4 zinc finger M1S41_17475 PF01638 HxlR-like helix-turn-helix M1S41_17480 PF08240 Alcohol dehydrogenase GroES-like domain M1S41_17480 PF00107 Zinc-binding dehydrogenase M1S41_17485 PF04102 SlyX M1S41_17490 PF12848 ABC transporter M1S41_17490 PF16326 ABC transporter C-terminal domain M1S41_17490 PF00005 ABC transporter M1S41_17495 PF01810 LysE type translocator M1S41_17500 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S41_17510 PF00375 Sodium:dicarboxylate symporter family M1S41_17520 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S41_17520 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S41_17540 PF01416 tRNA pseudouridine synthase M1S41_17550 PF01176 Translation initiation factor 1A / IF-1 M1S41_17565 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S41_17575 PF00694 Aconitase C-terminal domain M1S41_17580 PF00330 Aconitase family (aconitate hydratase) M1S41_17590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_17590 PF03466 LysR substrate binding domain M1S41_17610 PF00293 NUDIX domain M1S41_17615 PF00391 PEP-utilising enzyme, mobile domain M1S41_17615 PF02896 PEP-utilising enzyme, TIM barrel domain M1S41_17615 PF01590 GAF domain M1S41_17615 PF05524 PEP-utilising enzyme, N-terminal M1S41_17620 PF00141 Peroxidase M1S41_17625 PF12706 Beta-lactamase superfamily domain M1S41_17630 PF03466 LysR substrate binding domain M1S41_17630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_17640 PF02798 Glutathione S-transferase, N-terminal domain M1S41_17645 PF08279 HTH domain M1S41_17645 PF13280 WYL domain M1S41_17650 PF13419 Haloacid dehalogenase-like hydrolase M1S41_17655 PF00849 RNA pseudouridylate synthase M1S41_17655 PF01479 S4 domain M1S41_17660 PF10150 Ribonuclease E/G family M1S41_17660 PF00575 S1 RNA binding domain M1S41_17660 PF12111 Polyribonucleotide phosphorylase C terminal M1S41_17665 PF00501 AMP-binding enzyme M1S41_17665 PF13193 AMP-binding enzyme C-terminal domain M1S41_17680 PF03466 LysR substrate binding domain M1S41_17680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_17685 PF00106 short chain dehydrogenase M1S41_17690 PF06969 HemN C-terminal domain M1S41_17690 PF04055 Radical SAM superfamily M1S41_17700 PF01554 MatE M1S41_17705 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S41_17705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_17705 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_17710 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S41_17710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_17715 PF03109 ABC1 family M1S41_17720 PF01197 Ribosomal protein L31 M1S41_17735 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1S41_17755 PF03884 DNA gyrase inhibitor YacG M1S41_17760 PF00753 Metallo-beta-lactamase superfamily M1S41_17765 PF00762 Ferrochelatase M1S41_17775 PF01177 Asp/Glu/Hydantoin racemase M1S41_17790 PF01206 Sulfurtransferase TusA M1S41_17795 PF00571 CBS domain M1S41_17795 PF03471 Transporter associated domain M1S41_17800 PF00795 Carbon-nitrogen hydrolase M1S41_17805 PF01588 Putative tRNA binding domain M1S41_17815 PF07963 Prokaryotic N-terminal methylation motif M1S41_17815 PF08334 Type II secretion system (T2SS), protein G M1S41_17820 PF00482 Type II secretion system (T2SS), protein F M1S41_17825 PF00270 DEAD/DEAH box helicase M1S41_17825 PF00271 Helicase conserved C-terminal domain M1S41_17825 PF17764 3′ DNA-binding domain (3′BD) M1S41_17825 PF18074 Primosomal protein N C-terminal domain M1S41_17825 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M1S41_17830 PF02254 TrkA-N domain M1S41_17830 PF00999 Sodium/hydrogen exchanger family M1S41_17835 PF01430 Hsp33 protein M1S41_17845 PF00226 DnaJ domain M1S41_17845 PF01556 DnaJ C terminal domain M1S41_17855 PF01544 CorA-like Mg2+ transporter protein M1S41_17860 PF00013 KH domain M1S41_17860 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M1S41_17860 PF01138 3' exoribonuclease family, domain 1 M1S41_17860 PF00575 S1 RNA binding domain M1S41_17860 PF03725 3' exoribonuclease family, domain 2 M1S41_17865 PF00312 Ribosomal protein S15 M1S41_17870 PF00144 Beta-lactamase M1S41_17875 PF13538 UvrD-like helicase C-terminal domain M1S41_17880 PF12705 PD-(D/E)XK nuclease superfamily M1S41_17880 PF00580 UvrD/REP helicase N-terminal domain M1S41_17880 PF13361 UvrD-like helicase C-terminal domain M1S41_17885 PF17946 RecC C-terminal domain M1S41_17895 PF03976 Polyphosphate kinase 2 (PPK2) M1S41_17905 PF01209 ubiE/COQ5 methyltransferase family M1S41_17915 PF03109 ABC1 family M1S41_17920 PF01494 FAD binding domain M1S41_17925 PF01502 Phosphoribosyl-AMP cyclohydrolase M1S41_17940 PF13244 Domain of unknown function (DUF4040) M1S41_17940 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M1S41_17940 PF00361 Proton-conducting membrane transporter M1S41_17940 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S41_17945 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S41_17950 PF00361 Proton-conducting membrane transporter M1S41_17955 PF01899 Na+/H+ ion antiporter subunit M1S41_17960 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M1S41_17965 PF03334 Na+/H+ antiporter subunit M1S41_17970 PF02033 Ribosome-binding factor A M1S41_17975 PF11987 Translation-initiation factor 2 M1S41_17975 PF04760 Translation initiation factor IF-2, N-terminal region M1S41_17975 PF00009 Elongation factor Tu GTP binding domain M1S41_17975 PF08364 Bacterial translation initiation factor IF-2 associated region M1S41_17980 PF13184 NusA-like KH domain M1S41_17980 PF08529 NusA N-terminal domain M1S41_17980 PF00575 S1 RNA binding domain M1S41_17985 PF02576 RimP N-terminal domain M1S41_17985 PF17384 RimP C-terminal SH3 domain M1S41_18005 PF03840 Preprotein translocase SecG subunit M1S41_18010 PF00121 Triosephosphate isomerase M1S41_18015 PF00437 Type II/IV secretion system protein M1S41_18015 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S41_18020 PF00482 Type II secretion system (T2SS), protein F M1S41_18030 PF06750 Bacterial Peptidase A24 N-terminal domain M1S41_18030 PF01478 Type IV leader peptidase family M1S41_18035 PF01121 Dephospho-CoA kinase M1S41_18045 PF00588 SpoU rRNA Methylase family M1S41_18045 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S41_18050 PF06865 Pyrimidine/purine nucleoside phosphorylase M1S41_18060 PF02463 RecF/RecN/SMC N terminal domain M1S41_18065 PF02622 Uncharacterized ACR, COG1678 M1S41_18070 PF03652 Holliday junction resolvase M1S41_18075 PF13533 Biotin-lipoyl like M1S41_18100 PF02805 Metal binding domain of Ada M1S41_18100 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S41_18100 PF12833 Helix-turn-helix domain M1S41_18100 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S41_18105 PF01066 CDP-alcohol phosphatidyltransferase M1S41_18115 PF08459 UvrC Helix-hairpin-helix N-terminal M1S41_18115 PF01541 GIY-YIG catalytic domain M1S41_18115 PF02151 UvrB/uvrC motif M1S41_18135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S41_18135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S41_18135 PF00378 Enoyl-CoA hydratase/isomerase M1S41_18140 PF00108 Thiolase, N-terminal domain M1S41_18140 PF02803 Thiolase, C-terminal domain M1S41_18160 PF00376 MerR family regulatory protein M1S41_18160 PF09278 MerR, DNA binding M1S41_18170 PF01323 DSBA-like thioredoxin domain M1S41_18185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_18185 PF00183 Hsp90 protein M1S41_18200 PF13726 Na+-H+ antiporter family M1S41_18200 PF03553 Na+/H+ antiporter family M1S41_18205 PF00561 alpha/beta hydrolase fold M1S41_18225 PF04997 RNA polymerase Rpb1, domain 1 M1S41_18225 PF00623 RNA polymerase Rpb1, domain 2 M1S41_18225 PF04983 RNA polymerase Rpb1, domain 3 M1S41_18225 PF05000 RNA polymerase Rpb1, domain 4 M1S41_18225 PF04998 RNA polymerase Rpb1, domain 5 M1S41_18230 PF04563 RNA polymerase beta subunit M1S41_18230 PF10385 RNA polymerase beta subunit external 1 domain M1S41_18230 PF00562 RNA polymerase Rpb2, domain 6 M1S41_18230 PF04560 RNA polymerase Rpb2, domain 7 M1S41_18230 PF04565 RNA polymerase Rpb2, domain 3 M1S41_18230 PF04561 RNA polymerase Rpb2, domain 2 M1S41_18235 PF00542 Ribosomal protein L7/L12 C-terminal domain M1S41_18235 PF16320 Ribosomal protein L7/L12 dimerisation domain M1S41_18240 PF00466 Ribosomal protein L10 M1S41_18245 PF00687 Ribosomal protein L1p/L10e family M1S41_18250 PF00298 Ribosomal protein L11, RNA binding domain M1S41_18250 PF03946 Ribosomal protein L11, N-terminal domain M1S41_18255 PF00467 KOW motif M1S41_18255 PF02357 Transcription termination factor nusG M1S41_18260 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M1S41_18270 PF03143 Elongation factor Tu C-terminal domain M1S41_18270 PF00009 Elongation factor Tu GTP binding domain M1S41_18270 PF03144 Elongation factor Tu domain 2 M1S41_18295 PF00425 chorismate binding enzyme M1S41_18295 PF04715 Anthranilate synthase component I, N terminal region M1S41_18300 PF13419 Haloacid dehalogenase-like hydrolase M1S41_18305 PF00498 FHA domain M1S41_18305 PF12401 Protein of unknown function (DUF2662) M1S41_18310 PF03958 Bacterial type II/III secretion system short domain M1S41_18310 PF00263 Bacterial type II and III secretion system protein M1S41_18325 PF00816 H-NS histone family M1S41_18350 PF03900 Porphobilinogen deaminase, C-terminal domain M1S41_18350 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M1S41_18355 PF00072 Response regulator receiver domain M1S41_18355 PF04397 LytTr DNA-binding domain M1S41_18360 PF06580 Histidine kinase M1S41_18360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_18360 PF07694 5TMR of 5TMR-LYT M1S41_18365 PF14698 Argininosuccinate lyase C-terminal M1S41_18365 PF00206 Lyase M1S41_18370 PF04362 Bacterial Fe(2+) trafficking M1S41_18375 PF01895 PhoU domain M1S41_18380 PF02321 Outer membrane efflux protein M1S41_18385 PF00892 EamA-like transporter family M1S41_18400 PF01964 Radical SAM ThiC family M1S41_18400 PF13667 ThiC-associated domain M1S41_18405 PF00293 NUDIX domain M1S41_18410 PF00149 Calcineurin-like phosphoesterase M1S41_18415 PF01258 Prokaryotic dksA/traR C4-type zinc finger M1S41_18420 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S41_18425 PF01098 Cell cycle protein M1S41_18430 PF02875 Mur ligase family, glutamate ligase domain M1S41_18430 PF08245 Mur ligase middle domain M1S41_18440 PF07664 Ferrous iron transport protein B C terminus M1S41_18440 PF02421 Ferrous iron transport protein B M1S41_18440 PF07670 Nucleoside recognition M1S41_18450 PF00589 Phage integrase family M1S41_18450 PF02899 Phage integrase, N-terminal SAM-like domain M1S41_18455 PF13098 Thioredoxin-like domain M1S41_18455 PF10411 Disulfide bond isomerase protein N-terminus M1S41_18460 PF01842 ACT domain M1S41_18460 PF00742 Homoserine dehydrogenase M1S41_18460 PF03447 Homoserine dehydrogenase, NAD binding domain M1S41_18465 PF00291 Pyridoxal-phosphate dependent enzyme M1S41_18470 PF00768 D-alanyl-D-alanine carboxypeptidase M1S41_18475 PF00072 Response regulator receiver domain M1S41_18475 PF00196 Bacterial regulatory proteins, luxR family M1S41_18480 PF00512 His Kinase A (phospho-acceptor) domain M1S41_18480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S41_18485 PF00072 Response regulator receiver domain M1S41_18485 PF00158 Sigma-54 interaction domain M1S41_18485 PF02954 Bacterial regulatory protein, Fis family M1S41_18490 PF00595 PDZ domain M1S41_18490 PF03572 Peptidase family S41 M1S41_18495 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M1S41_18495 PF01676 Metalloenzyme superfamily M1S41_18500 PF03739 Lipopolysaccharide export system permease LptF/LptG M1S41_18510 PF00883 Cytosol aminopeptidase family, catalytic domain M1S41_18510 PF02789 Cytosol aminopeptidase family, N-terminal domain M1S41_18530 PF00677 Lumazine binding domain M1S41_18540 PF01872 RibD C-terminal domain M1S41_18540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S41_18545 PF03477 ATP cone domain M1S41_18550 PF00909 Ammonium Transporter Family M1S41_18555 PF00543 Nitrogen regulatory protein P-II M1S41_18575 PF01636 Phosphotransferase enzyme family M1S41_18580 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M1S41_18600 PF00440 Bacterial regulatory proteins, tetR family M1S41_18600 PF02909 Tetracyclin repressor-like, C-terminal domain M1S41_18605 PF07690 Major Facilitator Superfamily M1S41_18615 PF01740 STAS domain M1S41_18615 PF00916 Sulfate permease family M1S41_18620 PF00582 Universal stress protein family M1S41_18640 PF00665 Integrase core domain M1S41_18655 PF00392 Bacterial regulatory proteins, gntR family M1S41_18655 PF00155 Aminotransferase class I and II M1S41_18665 PF00701 Dihydrodipicolinate synthetase family M1S41_18680 PF03573 outer membrane porin, OprD family M1S41_18685 PF00719 Inorganic pyrophosphatase M1S41_18700 PF00501 AMP-binding enzyme M1S41_18700 PF13193 AMP-binding enzyme C-terminal domain M1S41_18705 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S41_18705 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S41_18710 PF07690 Major Facilitator Superfamily M1S41_18715 PF03458 UPF0126 domain M1S41_18720 PF02810 SEC-C motif M1S41_18725 PF03471 Transporter associated domain M1S41_18725 PF03741 Integral membrane protein TerC family M1S41_18730 PF03641 Possible lysine decarboxylase M1S41_18735 PF07690 Major Facilitator Superfamily M1S41_18745 PF00817 impB/mucB/samB family M1S41_18745 PF11799 impB/mucB/samB family C-terminal domain M1S41_18745 PF11798 IMS family HHH motif M1S41_18765 PF04055 Radical SAM superfamily M1S41_18765 PF08497 Radical SAM N-terminal M1S41_18765 PF11842 Domain of unknown function (DUF3362) M1S41_18785 PF03358 NADPH-dependent FMN reductase M1S41_18795 PF00291 Pyridoxal-phosphate dependent enzyme M1S41_18855 PF01327 Polypeptide deformylase M1S41_18865 PF02481 DNA recombination-mediator protein A M1S41_18865 PF17782 DprA winged helix domain M1S41_18870 PF01300 Telomere recombination M1S41_18875 PF00892 EamA-like transporter family M1S41_18880 PF00440 Bacterial regulatory proteins, tetR family M1S41_18885 PF07690 Major Facilitator Superfamily M1S41_18895 PF00255 Glutathione peroxidase M1S41_18905 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M1S41_18910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S41_18910 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S41_18915 PF00231 ATP synthase M1S41_18920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S41_18920 PF00306 ATP synthase alpha/beta chain, C terminal domain M1S41_18920 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S41_18925 PF00213 ATP synthase delta (OSCP) subunit M1S41_18930 PF00430 ATP synthase B/B' CF(0) M1S41_18935 PF00137 ATP synthase subunit C M1S41_18940 PF00119 ATP synthase A chain M1S41_18960 PF00005 ABC transporter M1S41_18965 PF00950 ABC 3 transport family M1S41_18970 PF01810 LysE type translocator M1S41_18975 PF04261 Dyp-type peroxidase family M1S41_18985 PF00390 Malic enzyme, N-terminal domain M1S41_18985 PF03949 Malic enzyme, NAD binding domain M1S41_18990 PF03485 Arginyl tRNA synthetase N terminal domain M1S41_18990 PF05746 DALR anticodon binding domain M1S41_18990 PF00750 tRNA synthetases class I (R) M1S41_19010 PF02678 Pirin M1S41_19010 PF05726 Pirin C-terminal cupin domain M1S41_19020 PF03551 Transcriptional regulator PadR-like family M1S41_19025 PF13427 Domain of unknown function (DUF4111) M1S41_19025 PF01909 Nucleotidyltransferase domain M1S41_19030 PF00117 Glutamine amidotransferase class-I M1S41_19030 PF00958 GMP synthase C terminal domain M1S41_19030 PF02540 NAD synthase M1S41_19035 PF04286 Protein of unknown function (DUF445) M1S41_19040 PF07681 DoxX M1S41_19045 PF09335 SNARE associated Golgi protein M1S41_19060 PF13614 AAA domain M1S41_19070 PF01722 BolA-like protein M1S41_19085 PF01648 4'-phosphopantetheinyl transferase superfamily M1S41_19090 PF12697 Alpha/beta hydrolase family M1S41_19110 PF00975 Thioesterase domain M1S41_19110 PF14765 Polyketide synthase dehydratase M1S41_19110 PF00550 Phosphopantetheine attachment site M1S41_19110 PF08242 Methyltransferase domain M1S41_19110 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S41_19110 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S41_19110 PF16197 Ketoacyl-synthetase C-terminal extension M1S41_19115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_19115 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_19115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_19120 PF00501 AMP-binding enzyme M1S41_19125 PF00196 Bacterial regulatory proteins, luxR family M1S41_19125 PF03472 Autoinducer binding domain M1S41_19135 PF00765 Autoinducer synthase M1S41_19140 PF07690 Major Facilitator Superfamily M1S41_19140 PF00083 Sugar (and other) transporter M1S41_19145 PF00378 Enoyl-CoA hydratase/isomerase M1S41_19150 PF00378 Enoyl-CoA hydratase/isomerase M1S41_19155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S41_19155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S41_19155 PF02770 Acyl-CoA dehydrogenase, middle domain M1S41_19160 PF13193 AMP-binding enzyme C-terminal domain M1S41_19160 PF00501 AMP-binding enzyme M1S41_19165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S41_19165 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S41_19170 PF00171 Aldehyde dehydrogenase family M1S41_19180 PF00324 Amino acid permease M1S41_19185 PF00324 Amino acid permease M1S41_19190 PF01042 Endoribonuclease L-PSP M1S41_19195 PF00842 Alanine racemase, C-terminal domain M1S41_19195 PF01168 Alanine racemase, N-terminal domain M1S41_19200 PF01266 FAD dependent oxidoreductase M1S41_19205 PF01037 Lrp/AsnC ligand binding domain M1S41_19215 PF07715 TonB-dependent Receptor Plug Domain M1S41_19215 PF00593 TonB dependent receptor M1S41_19230 PF00849 RNA pseudouridylate synthase M1S41_19245 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S41_19245 PF00440 Bacterial regulatory proteins, tetR family M1S41_19255 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S41_19255 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S41_19290 PF00330 Aconitase family (aconitate hydratase) M1S41_19290 PF00694 Aconitase C-terminal domain M1S41_19295 PF00285 Citrate synthase, C-terminal domain M1S41_19305 PF00392 Bacterial regulatory proteins, gntR family M1S41_19305 PF07729 FCD domain M1S41_19315 PF00155 Aminotransferase class I and II M1S41_19320 PF09330 D-lactate dehydrogenase, membrane binding M1S41_19320 PF01565 FAD binding domain M1S41_19325 PF01070 FMN-dependent dehydrogenase M1S41_19330 PF00392 Bacterial regulatory proteins, gntR family M1S41_19330 PF07729 FCD domain M1S41_19335 PF02652 L-lactate permease M1S41_19340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S41_19340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S41_19340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S41_19340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S41_19345 PF16363 GDP-mannose 4,6 dehydratase M1S41_19350 PF00342 Phosphoglucose isomerase M1S41_19355 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S41_19355 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S41_19355 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S41_19360 PF00483 Nucleotidyl transferase M1S41_19365 PF02397 Bacterial sugar transferase M1S41_19370 PF00535 Glycosyl transferase family 2 M1S41_19400 PF08666 SAF domain M1S41_19400 PF03102 NeuB family M1S41_19415 PF02348 Cytidylyltransferase M1S41_19420 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M1S41_19425 PF02719 Polysaccharide biosynthesis protein M1S41_19430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S41_19430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S41_19430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S41_19435 PF02563 Polysaccharide biosynthesis/export protein M1S41_19435 PF18412 Outer-membrane lipoprotein Wza C-terminal domain M1S41_19435 PF10531 SLBB domain M1S41_19440 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S41_19445 PF13614 AAA domain M1S41_19445 PF13807 G-rich domain on putative tyrosine kinase M1S41_19445 PF02706 Chain length determinant protein M1S41_19450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S41_19450 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S41_19455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S41_19455 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S41_19465 PF01510 N-acetylmuramoyl-L-alanine amidase M1S41_19470 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M1S41_19470 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M1S41_19480 PF05506 Domain of unknown function (DUF756) M1S41_19480 PF04185 Phosphoesterase family M1S41_19490 PF03725 3' exoribonuclease family, domain 2 M1S41_19490 PF01138 3' exoribonuclease family, domain 1 M1S41_19495 PF00487 Fatty acid desaturase M1S41_19500 PF00175 Oxidoreductase NAD-binding domain M1S41_19505 PF00440 Bacterial regulatory proteins, tetR family M1S41_19510 PF08360 QacR-like protein, C-terminal region M1S41_19510 PF00440 Bacterial regulatory proteins, tetR family M1S41_19515 PF01323 DSBA-like thioredoxin domain M1S41_19525 PF13419 Haloacid dehalogenase-like hydrolase M1S41_19530 PF00106 short chain dehydrogenase M1S41_19545 PF00583 Acetyltransferase (GNAT) family M1S41_19545 PF00696 Amino acid kinase family M1S41_19550 PF09084 NMT1/THI5 like M1S41_19555 PF09084 NMT1/THI5 like M1S41_19560 PF00296 Luciferase-like monooxygenase M1S41_19565 PF00528 Binding-protein-dependent transport system inner membrane component M1S41_19570 PF00005 ABC transporter M1S41_19575 PF00440 Bacterial regulatory proteins, tetR family M1S41_19575 PF08362 YcdC-like protein, C-terminal region M1S41_19580 PF01048 Phosphorylase superfamily M1S41_19590 PF01687 Riboflavin kinase M1S41_19590 PF06574 FAD synthetase M1S41_19595 PF06827 Zinc finger found in FPG and IleRS M1S41_19595 PF08264 Anticodon-binding domain of tRNA M1S41_19595 PF00133 tRNA synthetases class I (I, L, M and V) M1S41_19600 PF01252 Signal peptidase (SPase) II M1S41_19605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S41_19645 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S41_19650 PF07859 alpha/beta hydrolase fold M1S41_19670 PF03466 LysR substrate binding domain M1S41_19670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S41_19675 PF01025 GrpE M1S41_19680 PF00012 Hsp70 protein M1S41_19700 PF13406 Transglycosylase SLT domain M1S41_19705 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M1S41_19705 PF02222 ATP-grasp domain M1S41_19710 PF00731 AIR carboxylase M1S41_19720 PF08245 Mur ligase middle domain M1S41_19720 PF01225 Mur ligase family, catalytic domain M1S41_19720 PF02875 Mur ligase family, glutamate ligase domain M1S41_19730 PF01569 PAP2 superfamily M1S41_19735 PF03741 Integral membrane protein TerC family M1S41_19745 PF03738 Glutathionylspermidine synthase preATP-grasp M1S41_19750 PF00355 Rieske [2Fe-2S] domain M1S41_19755 PF01979 Amidohydrolase family M1S41_19760 PF00156 Phosphoribosyl transferase domain M1S41_19770 PF10411 Disulfide bond isomerase protein N-terminus M1S41_19770 PF13098 Thioredoxin-like domain M1S41_19775 PF01545 Cation efflux family M1S41_19775 PF16916 Dimerisation domain of Zinc Transporter M1S41_19780 PF02583 Metal-sensitive transcriptional repressor M1S41_19785 PF01926 50S ribosome-binding GTPase M1S41_19785 PF12631 MnmE helical domain M1S41_19785 PF10396 GTP-binding protein TrmE N-terminus M1S41_19790 PF02096 60Kd inner membrane protein M1S41_19790 PF14849 YidC periplasmic domain M1S41_19795 PF01809 Putative membrane protein insertion efficiency factor M1S41_19800 PF00825 Ribonuclease P M1S41_19805 PF00468 Ribosomal protein L34 M1S41_19810 PF13614 AAA domain M1S41_19815 PF17762 HTH domain found in ParB protein M1S41_19815 PF02195 ParB-like nuclease domain M1S41_19830 PF05816 Toxic anion resistance protein (TelA) M1S41_19970 PF18272 single-stranded DNA binding TraI N-terminal subdomain M1S41_19970 PF07057 DNA helicase TraI M1S41_19970 PF18340 DNA relaxase TraI 2B/2B-like domain M1S41_19970 PF08751 TrwC relaxase M1S41_20010 PF02796 Helix-turn-helix domain of resolvase M1S41_20010 PF00239 Resolvase, N terminal domain M1S41_20025 PF01464 Transglycosylase SLT domain M1S41_20060 PF10411 Disulfide bond isomerase protein N-terminus M1S41_20060 PF13098 Thioredoxin-like domain M1S41_20095 PF06834 TraU protein M1S41_20105 PF06986 Type-1V conjugative transfer system mating pair stabilisation M1S41_20120 PF06122 Conjugative relaxosome accessory transposon protein M1S41_20140 PF00817 impB/mucB/samB family M1S41_20140 PF11799 impB/mucB/samB family C-terminal domain M1S41_20140 PF13438 Domain of unknown function (DUF4113) M1S41_20230 PF00565 Staphylococcal nuclease homologue M1S41_20235 PF00816 H-NS histone family