locus-tag class description M1S44_00005 PF00308 Bacterial dnaA protein M1S44_00005 PF08299 Bacterial dnaA protein helix-turn-helix M1S44_00005 PF11638 DnaA N-terminal domain M1S44_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S44_00010 PF02767 DNA polymerase III beta subunit, central domain M1S44_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S44_00015 PF02463 RecF/RecN/SMC N terminal domain M1S44_00020 PF00204 DNA gyrase B M1S44_00020 PF00986 DNA gyrase B subunit, carboxyl terminus M1S44_00020 PF18053 DNA gyrase B subunit insert domain M1S44_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_00020 PF01751 Toprim domain M1S44_00030 PF09335 SNARE associated Golgi protein M1S44_00035 PF00005 ABC transporter M1S44_00035 PF12848 ABC transporter M1S44_00055 PF01521 Iron-sulphur cluster biosynthesis M1S44_00060 PF00561 alpha/beta hydrolase fold M1S44_00065 PF03702 Anhydro-N-acetylmuramic acid kinase M1S44_00070 PF00579 tRNA synthetases class I (W and Y) M1S44_00110 PF00209 Sodium:neurotransmitter symporter family M1S44_00120 PF01189 16S rRNA methyltransferase RsmB/F M1S44_00120 PF01029 NusB family M1S44_00125 PF02911 Formyl transferase, C-terminal domain M1S44_00125 PF00551 Formyl transferase M1S44_00130 PF00920 Dehydratase family M1S44_00145 PF03466 LysR substrate binding domain M1S44_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_00150 PF00860 Permease family M1S44_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S44_00160 PF00440 Bacterial regulatory proteins, tetR family M1S44_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S44_00170 PF00873 AcrB/AcrD/AcrF family M1S44_00180 PF00226 DnaJ domain M1S44_00180 PF00684 DnaJ central domain M1S44_00180 PF01556 DnaJ C terminal domain M1S44_00190 PF01113 Dihydrodipicolinate reductase, N-terminus M1S44_00190 PF05173 Dihydrodipicolinate reductase, C-terminus M1S44_00200 PF07690 Major Facilitator Superfamily M1S44_00205 PF00248 Aldo/keto reductase family M1S44_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_00210 PF03466 LysR substrate binding domain M1S44_00225 PF00392 Bacterial regulatory proteins, gntR family M1S44_00225 PF00155 Aminotransferase class I and II M1S44_00230 PF08240 Alcohol dehydrogenase GroES-like domain M1S44_00230 PF00107 Zinc-binding dehydrogenase M1S44_00235 PF03352 Methyladenine glycosylase M1S44_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S44_00250 PF14815 NUDIX domain M1S44_00250 PF10576 Iron-sulfur binding domain of endonuclease III M1S44_00250 PF00633 Helix-hairpin-helix motif M1S44_00265 PF07043 Protein of unknown function (DUF1328) M1S44_00270 PF03692 Putative zinc- or iron-chelating domain M1S44_00275 PF07995 Glucose / Sorbosone dehydrogenase M1S44_00280 PF00004 ATPase family associated with various cellular activities (AAA) M1S44_00280 PF16193 AAA C-terminal domain M1S44_00280 PF12002 MgsA AAA+ ATPase C terminal M1S44_00285 PF01226 Formate/nitrite transporter M1S44_00295 PF01259 SAICAR synthetase M1S44_00305 PF00701 Dihydrodipicolinate synthetase family M1S44_00310 PF00857 Isochorismatase family M1S44_00315 PF01758 Sodium Bile acid symporter family M1S44_00320 PF01554 MatE M1S44_00325 PF04463 Protein of unknown function (DUF523) M1S44_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S44_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S44_00345 PF02798 Glutathione S-transferase, N-terminal domain M1S44_00345 PF14497 Glutathione S-transferase, C-terminal domain M1S44_00355 PF00324 Amino acid permease M1S44_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S44_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S44_00375 PF07702 UTRA domain M1S44_00375 PF00392 Bacterial regulatory proteins, gntR family M1S44_00380 PF05962 HutD M1S44_00385 PF17391 Urocanase N-terminal domain M1S44_00385 PF01175 Urocanase Rossmann-like domain M1S44_00385 PF17392 Urocanase C-terminal domain M1S44_00390 PF00221 Aromatic amino acid lyase M1S44_00395 PF00324 Amino acid permease M1S44_00400 PF01979 Amidohydrolase family M1S44_00405 PF00491 Arginase family M1S44_00420 PF01177 Asp/Glu/Hydantoin racemase M1S44_00425 PF01380 SIS domain M1S44_00430 PF00132 Bacterial transferase hexapeptide (six repeats) M1S44_00430 PF14602 Hexapeptide repeat of succinyl-transferase M1S44_00430 PF12804 MobA-like NTP transferase domain M1S44_00435 PF04608 Phosphatidylglycerophosphatase A M1S44_00440 PF02769 AIR synthase related protein, C-terminal domain M1S44_00440 PF00586 AIR synthase related protein, N-terminal domain M1S44_00445 PF01029 NusB family M1S44_00450 PF00885 6,7-dimethyl-8-ribityllumazine synthase M1S44_00455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S44_00455 PF00925 GTP cyclohydrolase II M1S44_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase M1S44_00485 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S44_00485 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M1S44_00490 PF00581 Rhodanese-like domain M1S44_00495 PF02666 Phosphatidylserine decarboxylase M1S44_00500 PF03069 Acetamidase/Formamidase family M1S44_00520 PF00989 PAS fold M1S44_00520 PF11808 Phosphate regulon sensor protein PhoR M1S44_00520 PF00512 His Kinase A (phospho-acceptor) domain M1S44_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_00525 PF00072 Response regulator receiver domain M1S44_00525 PF00486 Transcriptional regulatory protein, C terminal M1S44_00535 PF00106 short chain dehydrogenase M1S44_00540 PF01554 MatE M1S44_00545 PF00155 Aminotransferase class I and II M1S44_00550 PF04286 Protein of unknown function (DUF445) M1S44_00565 PF04262 Glutamate-cysteine ligase M1S44_00570 PF02600 Disulfide bond formation protein DsbB M1S44_00575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S44_00575 PF04717 Type VI secretion system, phage-baseplate injector M1S44_00575 PF13296 Putative type VI secretion system Rhs element Vgr M1S44_00580 PF00877 NlpC/P60 family M1S44_00580 PF01476 LysM domain M1S44_00595 PF05728 Uncharacterised protein family (UPF0227) M1S44_00600 PF01751 Toprim domain M1S44_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_00600 PF00986 DNA gyrase B subunit, carboxyl terminus M1S44_00600 PF00204 DNA gyrase B M1S44_00605 PF00106 short chain dehydrogenase M1S44_00610 PF04115 Ureidoglycolate lyase M1S44_00615 PF03561 Allantoicase repeat M1S44_00620 PF01494 FAD binding domain M1S44_00630 PF00860 Permease family M1S44_00635 PF00576 HIUase/Transthyretin family M1S44_00665 PF11412 Disulphide bond corrector protein DsbC M1S44_00665 PF02683 Cytochrome C biogenesis protein transmembrane region M1S44_00670 PF00990 Diguanylate cyclase, GGDEF domain M1S44_00670 PF07694 5TMR of 5TMR-LYT M1S44_00675 PF07859 alpha/beta hydrolase fold M1S44_00685 PF03960 ArsC family M1S44_00690 PF03372 Endonuclease/Exonuclease/phosphatase family M1S44_00695 PF00156 Phosphoribosyl transferase domain M1S44_00700 PF00593 TonB dependent receptor M1S44_00700 PF07715 TonB-dependent Receptor Plug Domain M1S44_00710 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M1S44_00710 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M1S44_00715 PF04101 Glycosyltransferase family 28 C-terminal domain M1S44_00715 PF03033 Glycosyltransferase family 28 N-terminal domain M1S44_00720 PF01225 Mur ligase family, catalytic domain M1S44_00720 PF02875 Mur ligase family, glutamate ligase domain M1S44_00720 PF08245 Mur ligase middle domain M1S44_00725 PF07478 D-ala D-ala ligase C-terminus M1S44_00725 PF01820 D-ala D-ala ligase N-terminus M1S44_00730 PF08478 POTRA domain, FtsQ-type M1S44_00730 PF03799 Cell division protein FtsQ M1S44_00735 PF02491 SHS2 domain inserted in FTSA M1S44_00740 PF00091 Tubulin/FtsZ family, GTPase domain M1S44_00740 PF12327 FtsZ family, C-terminal domain M1S44_00745 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M1S44_00755 PF01551 Peptidase family M23 M1S44_00760 PF17831 Pyruvate dehydrogenase E1 component middle domain M1S44_00760 PF00456 Transketolase, thiamine diphosphate binding domain M1S44_00765 PF00364 Biotin-requiring enzyme M1S44_00765 PF02817 e3 binding domain M1S44_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S44_00775 PF01169 Uncharacterized protein family UPF0016 M1S44_00780 PF00593 TonB dependent receptor M1S44_00780 PF07715 TonB-dependent Receptor Plug Domain M1S44_00785 PF00258 Flavodoxin M1S44_00785 PF01613 Flavin reductase like domain M1S44_00790 PF03692 Putative zinc- or iron-chelating domain M1S44_00795 PF00478 IMP dehydrogenase / GMP reductase domain M1S44_00795 PF00571 CBS domain M1S44_00800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S44_00800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S44_00800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S44_00800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S44_00805 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M1S44_00805 PF01243 Pyridoxamine 5'-phosphate oxidase M1S44_00810 PF01368 DHH family M1S44_00810 PF17768 RecJ OB domain M1S44_00810 PF02272 DHHA1 domain M1S44_00830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S44_00835 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M1S44_00840 PF04452 RNA methyltransferase M1S44_00845 PF00924 Mechanosensitive ion channel M1S44_00855 PF13193 AMP-binding enzyme C-terminal domain M1S44_00855 PF00501 AMP-binding enzyme M1S44_00855 PF16177 Acetyl-coenzyme A synthetase N-terminus M1S44_00860 PF00857 Isochorismatase family M1S44_00865 PF01037 Lrp/AsnC ligand binding domain M1S44_00870 PF00872 Transposase, Mutator family M1S44_00875 PF00296 Luciferase-like monooxygenase M1S44_00880 PF03358 NADPH-dependent FMN reductase M1S44_00885 PF00196 Bacterial regulatory proteins, luxR family M1S44_00885 PF00072 Response regulator receiver domain M1S44_00895 PF01627 Hpt domain M1S44_00895 PF00512 His Kinase A (phospho-acceptor) domain M1S44_00895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_00895 PF00672 HAMP domain M1S44_00895 PF00072 Response regulator receiver domain M1S44_00900 PF04341 Protein of unknown function, DUF485 M1S44_00905 PF00474 Sodium:solute symporter family M1S44_00915 PF02028 BCCT, betaine/carnitine/choline family transporter M1S44_00925 PF00990 Diguanylate cyclase, GGDEF domain M1S44_00935 PF00005 ABC transporter M1S44_00935 PF17755 UvrA DNA-binding domain M1S44_00935 PF17760 UvrA interaction domain M1S44_00940 PF16925 Tetracyclin repressor-like, C-terminal domain M1S44_00940 PF00440 Bacterial regulatory proteins, tetR family M1S44_00945 PF08240 Alcohol dehydrogenase GroES-like domain M1S44_00945 PF00107 Zinc-binding dehydrogenase M1S44_00955 PF06942 GlpM protein M1S44_00960 PF03070 TENA/THI-4/PQQC family M1S44_00960 PF02581 Thiamine monophosphate synthase M1S44_00960 PF08543 Phosphomethylpyrimidine kinase M1S44_00970 PF07690 Major Facilitator Superfamily M1S44_00975 PF00436 Single-strand binding protein family M1S44_00985 PF03591 AzlC protein M1S44_00995 PF00324 Amino acid permease M1S44_01000 PF00392 Bacterial regulatory proteins, gntR family M1S44_01000 PF00155 Aminotransferase class I and II M1S44_01005 PF00202 Aminotransferase class-III M1S44_01010 PF00171 Aldehyde dehydrogenase family M1S44_01015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_01020 PF00857 Isochorismatase family M1S44_01025 PF02678 Pirin M1S44_01025 PF05726 Pirin C-terminal cupin domain M1S44_01030 PF01593 Flavin containing amine oxidoreductase M1S44_01050 PF07690 Major Facilitator Superfamily M1S44_01055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_01055 PF03466 LysR substrate binding domain M1S44_01075 PF00248 Aldo/keto reductase family M1S44_01080 PF02311 AraC-like ligand binding domain M1S44_01080 PF12833 Helix-turn-helix domain M1S44_01110 PF01638 HxlR-like helix-turn-helix M1S44_01115 PF02525 Flavodoxin-like fold M1S44_01135 PF02705 K+ potassium transporter M1S44_01160 PF00230 Major intrinsic protein M1S44_01175 PF00977 Histidine biosynthesis protein M1S44_01180 PF01636 Phosphotransferase enzyme family M1S44_01195 PF03992 Antibiotic biosynthesis monooxygenase M1S44_01210 PF00977 Histidine biosynthesis protein M1S44_01225 PF00117 Glutamine amidotransferase class-I M1S44_01230 PF00475 Imidazoleglycerol-phosphate dehydratase M1S44_01250 PF00583 Acetyltransferase (GNAT) family M1S44_01255 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M1S44_01255 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M1S44_01265 PF00672 HAMP domain M1S44_01265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_01265 PF00512 His Kinase A (phospho-acceptor) domain M1S44_01270 PF00486 Transcriptional regulatory protein, C terminal M1S44_01270 PF00072 Response regulator receiver domain M1S44_01275 PF16921 Tex protein YqgF-like domain M1S44_01275 PF17674 HHH domain M1S44_01275 PF00575 S1 RNA binding domain M1S44_01275 PF09371 Tex-like protein N-terminal domain M1S44_01280 PF01740 STAS domain M1S44_01280 PF00916 Sulfate permease family M1S44_01285 PF00106 short chain dehydrogenase M1S44_01290 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S44_01295 PF12848 ABC transporter M1S44_01295 PF00005 ABC transporter M1S44_01320 PF04191 Phospholipid methyltransferase M1S44_01340 PF00529 HlyD membrane-fusion protein of T1SS M1S44_01340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S44_01345 PF00873 AcrB/AcrD/AcrF family M1S44_01350 PF01545 Cation efflux family M1S44_01380 PF00324 Amino acid permease M1S44_01395 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S44_01410 PF01795 MraW methylase family M1S44_01420 PF00905 Penicillin binding protein transpeptidase domain M1S44_01420 PF03717 Penicillin-binding Protein dimerisation domain M1S44_01425 PF01225 Mur ligase family, catalytic domain M1S44_01425 PF02875 Mur ligase family, glutamate ligase domain M1S44_01425 PF08245 Mur ligase middle domain M1S44_01430 PF08245 Mur ligase middle domain M1S44_01430 PF02875 Mur ligase family, glutamate ligase domain M1S44_01430 PF01225 Mur ligase family, catalytic domain M1S44_01435 PF00953 Glycosyl transferase family 4 M1S44_01445 PF13847 Methyltransferase domain M1S44_01450 PF00905 Penicillin binding protein transpeptidase domain M1S44_01450 PF00912 Transglycosylase M1S44_01450 PF17092 Penicillin-binding protein OB-like domain M1S44_01455 PF11104 Type IV pilus assembly protein PilM; M1S44_01460 PF05137 Fimbrial assembly protein (PilN) M1S44_01465 PF04350 Pilus assembly protein, PilO M1S44_01475 PF07660 Secretin and TonB N terminus short domain M1S44_01475 PF11741 AMIN domain M1S44_01475 PF03958 Bacterial type II/III secretion system short domain M1S44_01475 PF00263 Bacterial type II and III secretion system protein M1S44_01480 PF01202 Shikimate kinase M1S44_01485 PF01761 3-dehydroquinate synthase M1S44_01495 PF00310 Glutamine amidotransferases class-II M1S44_01495 PF04898 Glutamate synthase central domain M1S44_01495 PF01645 Conserved region in glutamate synthase M1S44_01495 PF01493 GXGXG motif M1S44_01500 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M1S44_01500 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_01510 PF04011 LemA family M1S44_01515 PF04536 TPM domain M1S44_01525 PF07963 Prokaryotic N-terminal methylation motif M1S44_01525 PF00114 Pilin (bacterial filament) M1S44_01535 PF04932 O-Antigen ligase M1S44_01535 PF15864 Protein glycosylation ligase M1S44_01535 PF11846 Virulence factor membrane-bound polymerase, C-terminal M1S44_01545 PF00210 Ferritin-like domain M1S44_01550 PF04324 BFD-like [2Fe-2S] binding domain M1S44_01555 PF01042 Endoribonuclease L-PSP M1S44_01560 PF02824 TGS domain M1S44_01560 PF04607 Region found in RelA / SpoT proteins M1S44_01560 PF13291 ACT domain M1S44_01570 PF01192 RNA polymerase Rpb6 M1S44_01575 PF00625 Guanylate kinase M1S44_01580 PF02401 LytB protein M1S44_01620 PF00886 Ribosomal protein S16 M1S44_01625 PF01782 RimM N-terminal domain M1S44_01625 PF05239 PRC-barrel domain M1S44_01630 PF01746 tRNA (Guanine-1)-methyltransferase M1S44_01635 PF01245 Ribosomal protein L19 M1S44_01640 PF00561 alpha/beta hydrolase fold M1S44_01645 PF03280 Proteobacterial lipase chaperone protein M1S44_01650 PF16198 tRNA pseudouridylate synthase B C-terminal domain M1S44_01650 PF01509 TruB family pseudouridylate synthase (N terminal domain) M1S44_01650 PF09157 Pseudouridine synthase II TruB, C-terminal M1S44_01655 PF01925 Sulfite exporter TauE/SafE M1S44_01665 PF00892 EamA-like transporter family M1S44_01670 PF00892 EamA-like transporter family M1S44_01675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S44_01675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S44_01680 PF02913 FAD linked oxidases, C-terminal domain M1S44_01680 PF01565 FAD binding domain M1S44_01690 PF03992 Antibiotic biosynthesis monooxygenase M1S44_01695 PF02525 Flavodoxin-like fold M1S44_01705 PF07690 Major Facilitator Superfamily M1S44_01710 PF12805 FUSC-like inner membrane protein yccS M1S44_01715 PF00080 Copper/zinc superoxide dismutase (SODC) M1S44_01720 PF01594 AI-2E family transporter M1S44_01725 PF13614 AAA domain M1S44_01755 PF00324 Amino acid permease M1S44_01760 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S44_01760 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S44_01765 PF00202 Aminotransferase class-III M1S44_01770 PF04958 Arginine N-succinyltransferase beta subunit M1S44_01775 PF00171 Aldehyde dehydrogenase family M1S44_01780 PF04996 Succinylarginine dihydrolase M1S44_01785 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M1S44_01800 PF05922 Peptidase inhibitor I9 M1S44_01800 PF00082 Subtilase family M1S44_01815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_01815 PF03466 LysR substrate binding domain M1S44_01820 PF00892 EamA-like transporter family M1S44_01830 PF05746 DALR anticodon binding domain M1S44_01830 PF02092 Glycyl-tRNA synthetase beta subunit M1S44_01835 PF02091 Glycyl-tRNA synthetase alpha subunit M1S44_01860 PF00571 CBS domain M1S44_01865 PF04024 PspC domain M1S44_01875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_01875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_01875 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_01875 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S44_01885 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M1S44_01885 PF08501 Shikimate dehydrogenase substrate binding domain M1S44_01885 PF01488 Shikimate / quinate 5-dehydrogenase M1S44_01890 PF01218 Coproporphyrinogen III oxidase M1S44_01895 PF00925 GTP cyclohydrolase II M1S44_01900 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M1S44_01900 PF02779 Transketolase, pyrimidine binding domain M1S44_01900 PF02780 Transketolase, C-terminal domain M1S44_01905 PF00459 Inositol monophosphatase family M1S44_01910 PF00270 DEAD/DEAH box helicase M1S44_01910 PF03880 DbpA RNA binding domain M1S44_01910 PF12343 Cold shock protein DEAD box A M1S44_01910 PF00271 Helicase conserved C-terminal domain M1S44_01920 PF00005 ABC transporter M1S44_01925 PF02405 Permease MlaE M1S44_01935 PF05494 MlaC protein M1S44_01945 PF01544 CorA-like Mg2+ transporter protein M1S44_01950 PF03641 Possible lysine decarboxylase M1S44_01955 PF00293 NUDIX domain M1S44_01960 PF00156 Phosphoribosyl transferase domain M1S44_01965 PF00270 DEAD/DEAH box helicase M1S44_01965 PF00271 Helicase conserved C-terminal domain M1S44_01965 PF17191 RecG wedge domain M1S44_01980 PF01553 Acyltransferase M1S44_01990 PF00375 Sodium:dicarboxylate symporter family M1S44_02000 PF01926 50S ribosome-binding GTPase M1S44_02005 PF02082 Transcriptional regulator M1S44_02010 PF00970 Oxidoreductase FAD-binding domain M1S44_02010 PF00042 Globin M1S44_02010 PF00175 Oxidoreductase NAD-binding domain M1S44_02015 PF05872 Bacterial protein of unknown function (DUF853) M1S44_02020 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S44_02025 PF00117 Glutamine amidotransferase class-I M1S44_02030 PF00338 Ribosomal protein S10p/S20e M1S44_02035 PF00297 Ribosomal protein L3 M1S44_02040 PF00573 Ribosomal protein L4/L1 family M1S44_02045 PF00276 Ribosomal protein L23 M1S44_02050 PF00181 Ribosomal Proteins L2, RNA binding domain M1S44_02050 PF03947 Ribosomal Proteins L2, C-terminal domain M1S44_02055 PF00203 Ribosomal protein S19 M1S44_02060 PF00237 Ribosomal protein L22p/L17e M1S44_02070 PF00252 Ribosomal protein L16p/L10e M1S44_02075 PF00831 Ribosomal L29 protein M1S44_02080 PF00366 Ribosomal protein S17 M1S44_02085 PF00238 Ribosomal protein L14p/L23e M1S44_02090 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M1S44_02090 PF00467 KOW motif M1S44_02095 PF00673 ribosomal L5P family C-terminus M1S44_02095 PF00281 Ribosomal protein L5 M1S44_02100 PF00253 Ribosomal protein S14p/S29e M1S44_02105 PF00410 Ribosomal protein S8 M1S44_02110 PF00347 Ribosomal protein L6 M1S44_02115 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M1S44_02120 PF00333 Ribosomal protein S5, N-terminal domain M1S44_02120 PF03719 Ribosomal protein S5, C-terminal domain M1S44_02125 PF00327 Ribosomal protein L30p/L7e M1S44_02130 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M1S44_02135 PF00344 SecY translocase M1S44_02140 PF00444 Ribosomal protein L36 M1S44_02145 PF00416 Ribosomal protein S13/S18 M1S44_02150 PF00411 Ribosomal protein S11 M1S44_02155 PF01479 S4 domain M1S44_02155 PF00163 Ribosomal protein S4/S9 N-terminal domain M1S44_02160 PF01000 RNA polymerase Rpb3/RpoA insert domain M1S44_02160 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M1S44_02160 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M1S44_02165 PF01196 Ribosomal protein L17 M1S44_02170 PF00743 Flavin-binding monooxygenase-like M1S44_02175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_02175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_02175 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_02180 PF03937 Flavinator of succinate dehydrogenase M1S44_02210 PF09526 Probable metal-binding protein (DUF2387) M1S44_02215 PF01432 Peptidase family M3 M1S44_02220 PF08461 Ribonuclease R winged-helix domain M1S44_02220 PF08206 Ribonuclease B OB domain M1S44_02220 PF00773 RNB domain M1S44_02220 PF00575 S1 RNA binding domain M1S44_02220 PF17876 Cold shock domain M1S44_02265 PF01557 Fumarylacetoacetate (FAA) hydrolase family M1S44_02270 PF12833 Helix-turn-helix domain M1S44_02275 PF00892 EamA-like transporter family M1S44_02280 PF03631 Virulence factor BrkB M1S44_02285 PF03358 NADPH-dependent FMN reductase M1S44_02310 PF02130 Uncharacterized protein family UPF0054 M1S44_02315 PF02562 PhoH-like protein M1S44_02320 PF04055 Radical SAM superfamily M1S44_02320 PF01938 TRAM domain M1S44_02320 PF00919 Uncharacterized protein family UPF0004 M1S44_02325 PF01551 Peptidase family M23 M1S44_02325 PF10145 Phage-related minor tail protein M1S44_02325 PF01464 Transglycosylase SLT domain M1S44_02335 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1S44_02335 PF00056 lactate/malate dehydrogenase, NAD binding domain M1S44_02355 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M1S44_02360 PF01066 CDP-alcohol phosphatidyltransferase M1S44_02405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_02405 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_02405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_02410 PF17932 Tetracyclin repressor-like, C-terminal domain M1S44_02410 PF00440 Bacterial regulatory proteins, tetR family M1S44_02425 PF01039 Carboxyl transferase domain M1S44_02430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_02430 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_02430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_02440 PF00364 Biotin-requiring enzyme M1S44_02440 PF02785 Biotin carboxylase C-terminal domain M1S44_02440 PF00289 Biotin carboxylase, N-terminal domain M1S44_02440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S44_02450 PF04386 Stringent starvation protein B M1S44_02455 PF00043 Glutathione S-transferase, C-terminal domain M1S44_02455 PF13417 Glutathione S-transferase, N-terminal domain M1S44_02460 PF00380 Ribosomal protein S9/S16 M1S44_02465 PF00572 Ribosomal protein L13 M1S44_02470 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M1S44_02475 PF00398 Ribosomal RNA adenine dimethylase M1S44_02480 PF00149 Calcineurin-like phosphoesterase M1S44_02500 PF16360 GTP-binding GTPase Middle Region M1S44_02500 PF13167 GTP-binding GTPase N-terminal M1S44_02500 PF01926 50S ribosome-binding GTPase M1S44_02510 PF13091 PLD-like domain M1S44_02515 PF10518 TAT (twin-arginine translocation) pathway signal sequence M1S44_02515 PF00149 Calcineurin-like phosphoesterase M1S44_02520 PF00691 OmpA family M1S44_02520 PF01389 OmpA-like transmembrane domain M1S44_02525 PF00990 Diguanylate cyclase, GGDEF domain M1S44_02525 PF17152 Periplasmic sensor domain M1S44_02560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S44_02560 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_02570 PF00753 Metallo-beta-lactamase superfamily M1S44_02570 PF04273 Putative phosphatase (DUF442) M1S44_02575 PF00561 alpha/beta hydrolase fold M1S44_02580 PF00085 Thioredoxin M1S44_02585 PF03061 Thioesterase superfamily M1S44_02595 PF04461 Protein of unknown function (DUF520) M1S44_02605 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S44_02605 PF01266 FAD dependent oxidoreductase M1S44_02615 PF03795 YCII-related domain M1S44_02620 PF04279 Intracellular septation protein A M1S44_02625 PF02811 PHP domain M1S44_02630 PF01062 Bestrophin, RFP-TM, chloride channel M1S44_02635 PF04002 RadC-like JAB domain M1S44_02640 PF04127 DNA / pantothenate metabolism flavoprotein M1S44_02640 PF02441 Flavoprotein M1S44_02645 PF07549 SecD/SecF GG Motif M1S44_02645 PF02355 Protein export membrane protein M1S44_02650 PF07549 SecD/SecF GG Motif M1S44_02650 PF13721 SecD export protein N-terminal TM region M1S44_02650 PF02355 Protein export membrane protein M1S44_02655 PF02699 Preprotein translocase subunit M1S44_02660 PF01702 Queuine tRNA-ribosyltransferase M1S44_02675 PF02547 Queuosine biosynthesis protein M1S44_02685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_02685 PF00512 His Kinase A (phospho-acceptor) domain M1S44_02685 PF07689 KaiB domain M1S44_02690 PF03710 Glutamate-ammonia ligase adenylyltransferase M1S44_02690 PF08335 GlnD PII-uridylyltransferase M1S44_02695 PF01063 Amino-transferase class IV M1S44_02710 PF01522 Polysaccharide deacetylase M1S44_02715 PF00535 Glycosyl transferase family 2 M1S44_02720 PF13439 Glycosyltransferase Family 4 M1S44_02720 PF00534 Glycosyl transferases group 1 M1S44_02745 PF11380 Stealth protein CR2, conserved region 2 M1S44_02745 PF17102 Stealth protein CR3, conserved region 3 M1S44_02745 PF17101 Stealth protein CR1, conserved region 1 M1S44_02750 PF02938 GAD domain M1S44_02750 PF00152 tRNA synthetases class II (D, K and N) M1S44_02750 PF01336 OB-fold nucleic acid binding domain M1S44_02760 PF07715 TonB-dependent Receptor Plug Domain M1S44_02760 PF00593 TonB dependent receptor M1S44_02780 PF06146 Phosphate-starvation-inducible E M1S44_02785 PF00043 Glutathione S-transferase, C-terminal domain M1S44_02785 PF02798 Glutathione S-transferase, N-terminal domain M1S44_02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_02790 PF03466 LysR substrate binding domain M1S44_02795 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_02795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_02795 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S44_02795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_02800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_02800 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_02800 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S44_02800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_02810 PF00672 HAMP domain M1S44_02810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_02810 PF00512 His Kinase A (phospho-acceptor) domain M1S44_02815 PF00486 Transcriptional regulatory protein, C terminal M1S44_02815 PF00072 Response regulator receiver domain M1S44_02820 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M1S44_02840 PF01923 Cobalamin adenosyltransferase M1S44_02845 PF00593 TonB dependent receptor M1S44_02845 PF07715 TonB-dependent Receptor Plug Domain M1S44_02850 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M1S44_02855 PF00291 Pyridoxal-phosphate dependent enzyme M1S44_02880 PF00290 Tryptophan synthase alpha chain M1S44_02885 PF01039 Carboxyl transferase domain M1S44_02890 PF02875 Mur ligase family, glutamate ligase domain M1S44_02890 PF08245 Mur ligase middle domain M1S44_02905 PF00753 Metallo-beta-lactamase superfamily M1S44_02910 PF00578 AhpC/TSA family M1S44_02910 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S44_02915 PF01043 SecA preprotein cross-linking domain M1S44_02915 PF07517 SecA DEAD-like domain M1S44_02915 PF07516 SecA Wing and Scaffold domain M1S44_02915 PF02810 SEC-C motif M1S44_02925 PF07690 Major Facilitator Superfamily M1S44_02925 PF00083 Sugar (and other) transporter M1S44_02930 PF03006 Haemolysin-III related M1S44_02955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S44_02955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S44_02955 PF00378 Enoyl-CoA hydratase/isomerase M1S44_02960 PF02803 Thiolase, C-terminal domain M1S44_02960 PF00108 Thiolase, N-terminal domain M1S44_02965 PF12833 Helix-turn-helix domain M1S44_02965 PF02311 AraC-like ligand binding domain M1S44_02970 PF02515 CoA-transferase family III M1S44_02975 PF04966 Carbohydrate-selective porin, OprB family M1S44_02980 PF01011 PQQ enzyme repeat M1S44_02985 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S44_02985 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S44_02995 PF00893 Small Multidrug Resistance protein M1S44_03005 PF02803 Thiolase, C-terminal domain M1S44_03005 PF00108 Thiolase, N-terminal domain M1S44_03015 PF00691 OmpA family M1S44_03015 PF13505 Outer membrane protein beta-barrel domain M1S44_03025 PF01139 tRNA-splicing ligase RtcB M1S44_03030 PF00324 Amino acid permease M1S44_03035 PF08468 Methyltransferase small domain N-terminal M1S44_03035 PF05175 Methyltransferase small domain M1S44_03040 PF00860 Permease family M1S44_03045 PF00679 Elongation factor G C-terminus M1S44_03045 PF03144 Elongation factor Tu domain 2 M1S44_03045 PF00009 Elongation factor Tu GTP binding domain M1S44_03050 PF01741 Large-conductance mechanosensitive channel, MscL M1S44_03065 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M1S44_03065 PF06827 Zinc finger found in FPG and IleRS M1S44_03065 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M1S44_03070 PF02245 Methylpurine-DNA glycosylase (MPG) M1S44_03090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S44_03105 PF10411 Disulfide bond isomerase protein N-terminus M1S44_03105 PF13098 Thioredoxin-like domain M1S44_03110 PF01571 Aminomethyltransferase folate-binding domain M1S44_03120 PF04343 Protein of unknown function, DUF488 M1S44_03125 PF08274 PhnA Zinc-Ribbon M1S44_03125 PF03831 PhnA domain M1S44_03130 PF07411 Domain of unknown function (DUF1508) M1S44_03135 PF04073 Aminoacyl-tRNA editing domain M1S44_03135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S44_03135 PF03129 Anticodon binding domain M1S44_03140 PF00873 AcrB/AcrD/AcrF family M1S44_03155 PF00072 Response regulator receiver domain M1S44_03160 PF00072 Response regulator receiver domain M1S44_03165 PF01584 CheW-like domain M1S44_03170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M1S44_03170 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M1S44_03175 PF01584 CheW-like domain M1S44_03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_03175 PF00072 Response regulator receiver domain M1S44_03175 PF01627 Hpt domain M1S44_03185 PF07687 Peptidase dimerisation domain M1S44_03185 PF01546 Peptidase family M20/M25/M40 M1S44_03190 PF08085 Entericidin EcnA/B family M1S44_03200 PF04304 Protein of unknown function (DUF454) M1S44_03205 PF17969 L,D-transpeptidase C-terminal domain M1S44_03205 PF03734 L,D-transpeptidase catalytic domain M1S44_03245 PF00667 FAD binding domain M1S44_03245 PF00258 Flavodoxin M1S44_03245 PF00175 Oxidoreductase NAD-binding domain M1S44_03255 PF12805 FUSC-like inner membrane protein yccS M1S44_03260 PF07690 Major Facilitator Superfamily M1S44_03265 PF00881 Nitroreductase family M1S44_03280 PF01235 Sodium:alanine symporter family M1S44_03285 PF01734 Patatin-like phospholipase M1S44_03290 PF00291 Pyridoxal-phosphate dependent enzyme M1S44_03290 PF13291 ACT domain M1S44_03295 PF05992 SbmA/BacA-like family M1S44_03325 PF02934 GatB/GatE catalytic domain M1S44_03325 PF02637 GatB domain M1S44_03330 PF01425 Amidase M1S44_03335 PF02686 Glu-tRNAGln amidotransferase C subunit M1S44_03345 PF04085 rod shape-determining protein MreC M1S44_03350 PF04093 rod shape-determining protein MreD M1S44_03355 PF02545 Maf-like protein M1S44_03360 PF10150 Ribonuclease E/G family M1S44_03360 PF00575 S1 RNA binding domain M1S44_03370 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain M1S44_03370 PF06974 Protein of unknown function (DUF1298) M1S44_03375 PF01507 Phosphoadenosine phosphosulfate reductase family M1S44_03390 PF02525 Flavodoxin-like fold M1S44_03410 PF02673 Bacitracin resistance protein BacA M1S44_03415 PF06719 AraC-type transcriptional regulator N-terminus M1S44_03415 PF12833 Helix-turn-helix domain M1S44_03420 PF14765 Polyketide synthase dehydratase M1S44_03420 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S44_03420 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S44_03420 PF08659 KR domain M1S44_03420 PF09277 Erythronolide synthase, docking M1S44_03420 PF00698 Acyl transferase domain M1S44_03420 PF16197 Ketoacyl-synthetase C-terminal extension M1S44_03420 PF00550 Phosphopantetheine attachment site M1S44_03420 PF08240 Alcohol dehydrogenase GroES-like domain M1S44_03420 PF08990 Erythronolide synthase docking M1S44_03425 PF01965 DJ-1/PfpI family M1S44_03435 PF00324 Amino acid permease M1S44_03440 PF04303 PrpF protein M1S44_03445 PF00348 Polyprenyl synthetase M1S44_03450 PF04237 YjbR M1S44_03455 PF01145 SPFH domain / Band 7 family M1S44_03465 PF01734 Patatin-like phospholipase M1S44_03485 PF00884 Sulfatase M1S44_03485 PF08019 Phosphoethanolamine transferase EptA/EptB M1S44_03490 PF00486 Transcriptional regulatory protein, C terminal M1S44_03490 PF00072 Response regulator receiver domain M1S44_03495 PF08521 Two-component sensor kinase N-terminal M1S44_03495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_03495 PF00512 His Kinase A (phospho-acceptor) domain M1S44_03505 PF00909 Ammonium Transporter Family M1S44_03510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_03510 PF03466 LysR substrate binding domain M1S44_03530 PF08264 Anticodon-binding domain of tRNA M1S44_03530 PF00133 tRNA synthetases class I (I, L, M and V) M1S44_03530 PF10458 Valyl tRNA synthetase tRNA binding arm M1S44_03550 PF01906 Putative heavy-metal-binding M1S44_03555 PF01906 Putative heavy-metal-binding M1S44_03560 PF02321 Outer membrane efflux protein M1S44_03565 PF00873 AcrB/AcrD/AcrF family M1S44_03570 PF00529 HlyD membrane-fusion protein of T1SS M1S44_03570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S44_03575 PF01569 PAP2 superfamily M1S44_03585 PF00348 Polyprenyl synthetase M1S44_03595 PF00829 Ribosomal prokaryotic L21 protein M1S44_03600 PF01016 Ribosomal L27 protein M1S44_03605 PF03548 Outer membrane lipoprotein carrier protein LolA M1S44_03615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S44_03615 PF02403 Seryl-tRNA synthetase N-terminal domain M1S44_03620 PF10414 Sirohaem synthase dimerisation region M1S44_03620 PF14824 Sirohaem biosynthesis protein central M1S44_03620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S44_03625 PF00588 SpoU rRNA Methylase family M1S44_03630 PF01638 HxlR-like helix-turn-helix M1S44_03635 PF03358 NADPH-dependent FMN reductase M1S44_03640 PF13520 Amino acid permease M1S44_03645 PF00465 Iron-containing alcohol dehydrogenase M1S44_03655 PF03099 Biotin/lipoate A/B protein ligase family M1S44_03660 PF04359 Protein of unknown function (DUF493) M1S44_03665 PF04545 Sigma-70, region 4 M1S44_03665 PF04542 Sigma-70 region 2 M1S44_03665 PF04539 Sigma-70 region 3 M1S44_03665 PF03979 Sigma-70 factor, region 1.1 M1S44_03665 PF00140 Sigma-70 factor, region 1.2 M1S44_03665 PF04546 Sigma-70, non-essential region M1S44_03685 PF00581 Rhodanese-like domain M1S44_03685 PF17773 UPF0176 acylphosphatase like domain M1S44_03695 PF00285 Citrate synthase, C-terminal domain M1S44_03700 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S44_03705 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M1S44_03710 PF00890 FAD binding domain M1S44_03710 PF02910 Fumarate reductase flavoprotein C-term M1S44_03715 PF13085 2Fe-2S iron-sulfur cluster binding domain M1S44_03730 PF16078 2-oxoglutarate dehydrogenase N-terminus M1S44_03730 PF00676 Dehydrogenase E1 component M1S44_03730 PF16870 2-oxoglutarate dehydrogenase C-terminal M1S44_03730 PF02779 Transketolase, pyrimidine binding domain M1S44_03735 PF02817 e3 binding domain M1S44_03735 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S44_03735 PF00364 Biotin-requiring enzyme M1S44_03740 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_03740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S44_03745 PF00549 CoA-ligase M1S44_03745 PF08442 ATP-grasp domain M1S44_03750 PF02629 CoA binding domain M1S44_03750 PF00549 CoA-ligase M1S44_03755 PF00579 tRNA synthetases class I (W and Y) M1S44_03760 PF05661 Protein of unknown function (DUF808) M1S44_03765 PF04228 Putative neutral zinc metallopeptidase M1S44_03770 PF00999 Sodium/hydrogen exchanger family M1S44_03785 PF09587 Bacterial capsule synthesis protein PGA_cap M1S44_03795 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S44_03800 PF00582 Universal stress protein family M1S44_03805 PF00132 Bacterial transferase hexapeptide (six repeats) M1S44_03810 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S44_03810 PF03449 Transcription elongation factor, N-terminal M1S44_03815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S44_03815 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M1S44_03815 PF02142 MGS-like domain M1S44_03820 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M1S44_03820 PF00117 Glutamine amidotransferase class-I M1S44_03835 PF01985 CRS1 / YhbY (CRM) domain M1S44_03840 PF01728 FtsJ-like methyltransferase M1S44_03845 PF01434 Peptidase family M41 M1S44_03845 PF17862 AAA+ lid domain M1S44_03845 PF06480 FtsH Extracellular M1S44_03845 PF00004 ATPase family associated with various cellular activities (AAA) M1S44_03850 PF00809 Pterin binding enzyme M1S44_03870 PF16655 PhoD-like phosphatase, N-terminal domain M1S44_03870 PF09423 PhoD-like phosphatase M1S44_03885 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M1S44_03885 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M1S44_03900 PF00083 Sugar (and other) transporter M1S44_03905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1S44_03905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1S44_03910 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M1S44_03910 PF01266 FAD dependent oxidoreductase M1S44_03915 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1S44_03915 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1S44_03920 PF00781 Diacylglycerol kinase catalytic domain M1S44_03925 PF00149 Calcineurin-like phosphoesterase M1S44_03935 PF00166 Chaperonin 10 Kd subunit M1S44_03940 PF00118 TCP-1/cpn60 chaperonin family M1S44_03945 PF01219 Prokaryotic diacylglycerol kinase M1S44_03955 PF03009 Glycerophosphoryl diester phosphodiesterase family M1S44_03960 PF00873 AcrB/AcrD/AcrF family M1S44_03970 PF01435 Peptidase family M48 M1S44_03975 PF01464 Transglycosylase SLT domain M1S44_03980 PF01171 PP-loop family M1S44_03990 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S44_03990 PF01464 Transglycosylase SLT domain M1S44_03995 PF03449 Transcription elongation factor, N-terminal M1S44_03995 PF01272 Transcription elongation factor, GreA/GreB, C-term M1S44_04010 PF00975 Thioesterase domain M1S44_04010 PF00550 Phosphopantetheine attachment site M1S44_04010 PF00501 AMP-binding enzyme M1S44_04010 PF13193 AMP-binding enzyme C-terminal domain M1S44_04010 PF00668 Condensation domain M1S44_04040 PF00881 Nitroreductase family M1S44_04055 PF02595 Glycerate kinase family M1S44_04060 PF00384 Molybdopterin oxidoreductase M1S44_04065 PF02634 FdhD/NarQ family M1S44_04070 PF06803 Protein of unknown function (DUF1232) M1S44_04075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S44_04075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S44_04075 PF11890 Domain of unknown function (DUF3410) M1S44_04080 PF00152 tRNA synthetases class II (D, K and N) M1S44_04090 PF18073 Rubredoxin metal binding domain M1S44_04095 PF00324 Amino acid permease M1S44_04105 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M1S44_04105 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M1S44_04110 PF01678 Diaminopimelate epimerase M1S44_04115 PF01810 LysE type translocator M1S44_04120 PF00589 Phage integrase family M1S44_04120 PF02899 Phage integrase, N-terminal SAM-like domain M1S44_04125 PF01012 Electron transfer flavoprotein domain M1S44_04130 PF00766 Electron transfer flavoprotein FAD-binding domain M1S44_04130 PF01012 Electron transfer flavoprotein domain M1S44_04135 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S44_04135 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S44_04150 PF00535 Glycosyl transferase family 2 M1S44_04170 PF13533 Biotin-lipoyl like M1S44_04180 PF00266 Aminotransferase class-V M1S44_04195 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M1S44_04205 PF02687 FtsX-like permease family M1S44_04205 PF12704 MacB-like periplasmic core domain M1S44_04210 PF00005 ABC transporter M1S44_04215 PF00753 Metallo-beta-lactamase superfamily M1S44_04215 PF13567 Domain of unknown function (DUF4131) M1S44_04215 PF03772 Competence protein M1S44_04225 PF06965 Na+/H+ antiporter 1 M1S44_04225 PF01343 Peptidase family S49 M1S44_04230 PF12697 Alpha/beta hydrolase family M1S44_04235 PF00551 Formyl transferase M1S44_04240 PF00586 AIR synthase related protein, N-terminal domain M1S44_04240 PF02769 AIR synthase related protein, C-terminal domain M1S44_04245 PF01594 AI-2E family transporter M1S44_04250 PF00308 Bacterial dnaA protein M1S44_04250 PF08299 Bacterial dnaA protein helix-turn-helix M1S44_04250 PF11638 DnaA N-terminal domain M1S44_04280 PF00588 SpoU rRNA Methylase family M1S44_04280 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S44_04285 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M1S44_04295 PF00691 OmpA family M1S44_04300 PF04052 TolB amino-terminal domain M1S44_04300 PF07676 WD40-like Beta Propeller Repeat M1S44_04310 PF02472 Biopolymer transport protein ExbD/TolR M1S44_04315 PF01618 MotA/TolQ/ExbB proton channel family M1S44_04320 PF03061 Thioesterase superfamily M1S44_04325 PF01546 Peptidase family M20/M25/M40 M1S44_04325 PF07687 Peptidase dimerisation domain M1S44_04330 PF05496 Holliday junction DNA helicase RuvB P-loop domain M1S44_04330 PF05491 RuvB C-terminal winged helix domain M1S44_04330 PF17864 RuvB AAA lid domain M1S44_04335 PF07499 RuvA, C-terminal domain M1S44_04335 PF01330 RuvA N terminal domain M1S44_04340 PF01966 HD domain M1S44_04345 PF02769 AIR synthase related protein, C-terminal domain M1S44_04345 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M1S44_04345 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M1S44_04350 PF07690 Major Facilitator Superfamily M1S44_04355 PF01784 NIF3 (NGG1p interacting factor 3) M1S44_04360 PF00378 Enoyl-CoA hydratase/isomerase M1S44_04365 PF01467 Cytidylyltransferase-like M1S44_04365 PF00293 NUDIX domain M1S44_04375 PF00578 AhpC/TSA family M1S44_04390 PF06508 Queuosine biosynthesis protein QueC M1S44_04400 PF14602 Hexapeptide repeat of succinyl-transferase M1S44_04400 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M1S44_04400 PF00132 Bacterial transferase hexapeptide (six repeats) M1S44_04410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_04410 PF03466 LysR substrate binding domain M1S44_04415 PF00005 ABC transporter M1S44_04415 PF12857 TOBE-like domain M1S44_04420 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_04425 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_04440 PF01063 Amino-transferase class IV M1S44_04445 PF02618 YceG-like family M1S44_04450 PF02223 Thymidylate kinase M1S44_04460 PF00890 FAD binding domain M1S44_04460 PF02910 Fumarate reductase flavoprotein C-term M1S44_04465 PF13180 PDZ domain M1S44_04475 PF00679 Elongation factor G C-terminus M1S44_04475 PF00009 Elongation factor Tu GTP binding domain M1S44_04475 PF03144 Elongation factor Tu domain 2 M1S44_04475 PF06421 GTP-binding protein LepA C-terminus M1S44_04480 PF10502 Signal peptidase, peptidase S26 M1S44_04490 PF00035 Double-stranded RNA binding motif M1S44_04490 PF14622 Ribonuclease-III-like M1S44_04495 PF07650 KH domain M1S44_04495 PF01926 50S ribosome-binding GTPase M1S44_04505 PF02565 Recombination protein O C terminal M1S44_04505 PF11967 Recombination protein O N terminal M1S44_04510 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M1S44_04515 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M1S44_04520 PF00106 short chain dehydrogenase M1S44_04550 PF00155 Aminotransferase class I and II M1S44_04560 PF00990 Diguanylate cyclase, GGDEF domain M1S44_04560 PF17151 Periplasmic sensor domain M1S44_04570 PF00271 Helicase conserved C-terminal domain M1S44_04570 PF04851 Type III restriction enzyme, res subunit M1S44_04570 PF02151 UvrB/uvrC motif M1S44_04570 PF12344 Ultra-violet resistance protein B M1S44_04570 PF17757 UvrB interaction domain M1S44_04580 PF00892 EamA-like transporter family M1S44_04585 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S44_04585 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S44_04600 PF01018 GTP1/OBG M1S44_04600 PF01926 50S ribosome-binding GTPase M1S44_04605 PF00696 Amino acid kinase family M1S44_04605 PF01472 PUA domain M1S44_04615 PF07759 Protein of unknown function (DUF1615) M1S44_04620 PF01207 Dihydrouridine synthase (Dus) M1S44_04625 PF03060 Nitronate monooxygenase M1S44_04640 PF02350 UDP-N-acetylglucosamine 2-epimerase M1S44_04670 PF00875 DNA photolyase M1S44_04670 PF03441 FAD binding domain of DNA photolyase M1S44_04675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S44_04680 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_04685 PF07943 Penicillin-binding protein 5, C-terminal domain M1S44_04685 PF00768 D-alanyl-D-alanine carboxypeptidase M1S44_04695 PF03971 Monomeric isocitrate dehydrogenase M1S44_04700 PF00849 RNA pseudouridylate synthase M1S44_04705 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S44_04725 PF06779 Uncharacterised MFS-type transporter YbfB M1S44_04730 PF03466 LysR substrate binding domain M1S44_04730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_04735 PF00375 Sodium:dicarboxylate symporter family M1S44_04740 PF02567 Phenazine biosynthesis-like protein M1S44_04745 PF00675 Insulinase (Peptidase family M16) M1S44_04745 PF05193 Peptidase M16 inactive domain M1S44_04770 PF02581 Thiamine monophosphate synthase M1S44_04775 PF00202 Aminotransferase class-III M1S44_04785 PF00849 RNA pseudouridylate synthase M1S44_04790 PF12137 RNA polymerase recycling family C-terminal M1S44_04790 PF18337 RapA N-terminal Tudor like domain M1S44_04790 PF00271 Helicase conserved C-terminal domain M1S44_04790 PF00176 SNF2 family N-terminal domain M1S44_04790 PF18339 RapA N-terminal Tudor like domain 1 M1S44_04800 PF00440 Bacterial regulatory proteins, tetR family M1S44_04805 PF00175 Oxidoreductase NAD-binding domain M1S44_04805 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S44_04805 PF00970 Oxidoreductase FAD-binding domain M1S44_04810 PF00487 Fatty acid desaturase M1S44_04820 PF17754 MftR C-terminal domain M1S44_04820 PF00440 Bacterial regulatory proteins, tetR family M1S44_04830 PF00202 Aminotransferase class-III M1S44_04835 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S44_04840 PF00171 Aldehyde dehydrogenase family M1S44_04845 PF01037 Lrp/AsnC ligand binding domain M1S44_04850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S44_04850 PF00205 Thiamine pyrophosphate enzyme, central domain M1S44_04850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S44_04855 PF00324 Amino acid permease M1S44_04860 PF12849 PBP superfamily domain M1S44_04865 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_04870 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_04875 PF00005 ABC transporter M1S44_04880 PF01343 Peptidase family S49 M1S44_04880 PF08496 Peptidase family S49 N-terminal M1S44_04895 PF08328 Adenylosuccinate lyase C-terminal M1S44_04895 PF00206 Lyase M1S44_04900 PF04356 Protein of unknown function (DUF489) M1S44_04910 PF00293 NUDIX domain M1S44_04910 PF13344 Haloacid dehalogenase-like hydrolase M1S44_04915 PF00132 Bacterial transferase hexapeptide (six repeats) M1S44_04920 PF00768 D-alanyl-D-alanine carboxypeptidase M1S44_04920 PF07943 Penicillin-binding protein 5, C-terminal domain M1S44_04935 PF01975 Survival protein SurE M1S44_04940 PF01476 LysM domain M1S44_04940 PF01551 Peptidase family M23 M1S44_04945 PF03466 LysR substrate binding domain M1S44_04945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_04950 PF13654 AAA domain M1S44_04950 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S44_04955 PF07690 Major Facilitator Superfamily M1S44_04960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S44_04965 PF13593 SBF-like CPA transporter family (DUF4137) M1S44_04970 PF01197 Ribosomal protein L31 M1S44_04985 PF04055 Radical SAM superfamily M1S44_04990 PF01132 Elongation factor P (EF-P) OB domain M1S44_04990 PF08207 Elongation factor P (EF-P) KOW-like domain M1S44_04990 PF09285 Elongation factor P, C-terminal M1S44_04995 PF13722 5TM C-terminal transporter carbon starvation CstA M1S44_04995 PF02554 Carbon starvation protein CstA M1S44_05000 PF04328 Selenoprotein, putative M1S44_05035 PF13556 PucR C-terminal helix-turn-helix domain M1S44_05035 PF17853 GGDEF-like domain M1S44_05035 PF06018 CodY GAF-like domain M1S44_05050 PF00171 Aldehyde dehydrogenase family M1S44_05055 PF00324 Amino acid permease M1S44_05060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_05060 PF03466 LysR substrate binding domain M1S44_05065 PF02028 BCCT, betaine/carnitine/choline family transporter M1S44_05070 PF02028 BCCT, betaine/carnitine/choline family transporter M1S44_05075 PF00355 Rieske [2Fe-2S] domain M1S44_05075 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S44_05080 PF00171 Aldehyde dehydrogenase family M1S44_05090 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_05090 PF18113 Rubredoxin binding C-terminal domain M1S44_05095 PF01266 FAD dependent oxidoreductase M1S44_05095 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M1S44_05115 PF00892 EamA-like transporter family M1S44_05125 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M1S44_05130 PF00083 Sugar (and other) transporter M1S44_05135 PF13378 Enolase C-terminal domain-like M1S44_05135 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S44_05140 PF00698 Acyl transferase domain M1S44_05140 PF08990 Erythronolide synthase docking M1S44_05140 PF08240 Alcohol dehydrogenase GroES-like domain M1S44_05140 PF00550 Phosphopantetheine attachment site M1S44_05140 PF08659 KR domain M1S44_05140 PF14765 Polyketide synthase dehydratase M1S44_05140 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S44_05140 PF16197 Ketoacyl-synthetase C-terminal extension M1S44_05140 PF09277 Erythronolide synthase, docking M1S44_05140 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S44_05145 PF00440 Bacterial regulatory proteins, tetR family M1S44_05165 PF17954 Quercetinase C-terminal cupin domain M1S44_05165 PF02678 Pirin M1S44_05175 PF13309 HTH domain M1S44_05175 PF08348 YheO-like PAS domain M1S44_05185 PF00501 AMP-binding enzyme M1S44_05185 PF13193 AMP-binding enzyme C-terminal domain M1S44_05185 PF00668 Condensation domain M1S44_05185 PF00550 Phosphopantetheine attachment site M1S44_05190 PF00501 AMP-binding enzyme M1S44_05190 PF13193 AMP-binding enzyme C-terminal domain M1S44_05190 PF00668 Condensation domain M1S44_05190 PF00550 Phosphopantetheine attachment site M1S44_05190 PF00975 Thioesterase domain M1S44_05195 PF01032 FecCD transport family M1S44_05200 PF01032 FecCD transport family M1S44_05205 PF00005 ABC transporter M1S44_05210 PF01497 Periplasmic binding protein M1S44_05215 PF00593 TonB dependent receptor M1S44_05215 PF07715 TonB-dependent Receptor Plug Domain M1S44_05220 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S44_05225 PF00668 Condensation domain M1S44_05225 PF00501 AMP-binding enzyme M1S44_05225 PF00550 Phosphopantetheine attachment site M1S44_05230 PF00501 AMP-binding enzyme M1S44_05230 PF13193 AMP-binding enzyme C-terminal domain M1S44_05235 PF00857 Isochorismatase family M1S44_05235 PF00550 Phosphopantetheine attachment site M1S44_05240 PF00282 Pyridoxal-dependent decarboxylase conserved domain M1S44_05250 PF00005 ABC transporter M1S44_05255 PF00005 ABC transporter M1S44_05260 PF00975 Thioesterase domain M1S44_05270 PF00425 chorismate binding enzyme M1S44_05280 PF01208 Uroporphyrinogen decarboxylase (URO-D) M1S44_05285 PF05675 Protein of unknown function (DUF817) M1S44_05300 PF00144 Beta-lactamase M1S44_05310 PF01227 GTP cyclohydrolase I M1S44_05315 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S44_05315 PF01799 [2Fe-2S] binding domain M1S44_05320 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M1S44_05320 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M1S44_05335 PF00218 Indole-3-glycerol phosphate synthase M1S44_05340 PF00591 Glycosyl transferase family, a/b domain M1S44_05340 PF02885 Glycosyl transferase family, helical bundle domain M1S44_05345 PF07715 TonB-dependent Receptor Plug Domain M1S44_05345 PF00593 TonB dependent receptor M1S44_05350 PF11838 ERAP1-like C-terminal domain M1S44_05350 PF01433 Peptidase family M1 domain M1S44_05355 PF00117 Glutamine amidotransferase class-I M1S44_05365 PF00854 POT family M1S44_05370 PF00120 Glutamine synthetase, catalytic domain M1S44_05370 PF03951 Glutamine synthetase, beta-Grasp domain M1S44_05375 PF04345 Chorismate lyase M1S44_05380 PF01040 UbiA prenyltransferase family M1S44_05415 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M1S44_05415 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M1S44_05420 PF01784 NIF3 (NGG1p interacting factor 3) M1S44_05425 PF13180 PDZ domain M1S44_05430 PF01743 Poly A polymerase head domain M1S44_05430 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S44_05435 PF00390 Malic enzyme, N-terminal domain M1S44_05435 PF03949 Malic enzyme, NAD binding domain M1S44_05435 PF01515 Phosphate acetyl/butaryl transferase M1S44_05440 PF00563 EAL domain M1S44_05440 PF00990 Diguanylate cyclase, GGDEF domain M1S44_05440 PF03707 Bacterial signalling protein N terminal repeat M1S44_05445 PF04452 RNA methyltransferase M1S44_05450 PF02219 Methylenetetrahydrofolate reductase M1S44_05455 PF05221 S-adenosyl-L-homocysteine hydrolase M1S44_05455 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M1S44_05470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_05470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_05470 PF09317 Domain of unknown function (DUF1974) M1S44_05475 PF04055 Radical SAM superfamily M1S44_05480 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_05480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S44_05490 PF07690 Major Facilitator Superfamily M1S44_05500 PF00557 Metallopeptidase family M24 M1S44_05505 PF00318 Ribosomal protein S2 M1S44_05510 PF00889 Elongation factor TS M1S44_05520 PF12833 Helix-turn-helix domain M1S44_05540 PF03330 Lytic transglycolase M1S44_05540 PF05036 Sporulation related domain M1S44_05545 PF13406 Transglycosylase SLT domain M1S44_05550 PF01098 Cell cycle protein M1S44_05560 PF14489 QueF-like protein M1S44_05560 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M1S44_05565 PF01061 ABC-2 type transporter M1S44_05570 PF00005 ABC transporter M1S44_05600 PF00464 Serine hydroxymethyltransferase M1S44_05605 PF02321 Outer membrane efflux protein M1S44_05610 PF00873 AcrB/AcrD/AcrF family M1S44_05615 PF13533 Biotin-lipoyl like M1S44_05620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_05620 PF03466 LysR substrate binding domain M1S44_05625 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S44_05630 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_05635 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_05640 PF00005 ABC transporter M1S44_05645 PF00893 Small Multidrug Resistance protein M1S44_05650 PF00037 4Fe-4S binding domain M1S44_05655 PF01136 Peptidase family U32 M1S44_05655 PF16325 Peptidase family U32 C-terminal domain M1S44_05660 PF00155 Aminotransferase class I and II M1S44_05660 PF00392 Bacterial regulatory proteins, gntR family M1S44_05665 PF02567 Phenazine biosynthesis-like protein M1S44_05670 PF00970 Oxidoreductase FAD-binding domain M1S44_05670 PF00175 Oxidoreductase NAD-binding domain M1S44_05675 PF01980 tRNA-methyltransferase O M1S44_05675 PF18389 TrmO C-terminal domain M1S44_05685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S44_05685 PF00437 Type II/IV secretion system protein M1S44_05695 PF00072 Response regulator receiver domain M1S44_05695 PF00486 Transcriptional regulatory protein, C terminal M1S44_05700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_05700 PF00512 His Kinase A (phospho-acceptor) domain M1S44_05700 PF08521 Two-component sensor kinase N-terminal M1S44_05710 PF00293 NUDIX domain M1S44_05720 PF14814 Bifunctional transglycosylase second domain M1S44_05720 PF00905 Penicillin binding protein transpeptidase domain M1S44_05720 PF00912 Transglycosylase M1S44_05725 PF01513 ATP-NAD kinase M1S44_05730 PF07023 Protein of unknown function (DUF1315) M1S44_05735 PF00591 Glycosyl transferase family, a/b domain M1S44_05735 PF02885 Glycosyl transferase family, helical bundle domain M1S44_05740 PF00375 Sodium:dicarboxylate symporter family M1S44_05745 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_05745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_05745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_05750 PF00756 Putative esterase M1S44_05755 PF01842 ACT domain M1S44_05755 PF01817 Chorismate mutase type II M1S44_05755 PF00800 Prephenate dehydratase M1S44_05760 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S44_05770 PF01546 Peptidase family M20/M25/M40 M1S44_05770 PF07687 Peptidase dimerisation domain M1S44_05775 PF12706 Beta-lactamase superfamily domain M1S44_05785 PF03883 Peroxide stress protein YaaA M1S44_05795 PF05690 Thiazole biosynthesis protein ThiG M1S44_05805 PF04241 Protein of unknown function (DUF423) M1S44_05810 PF00140 Sigma-70 factor, region 1.2 M1S44_05810 PF04545 Sigma-70, region 4 M1S44_05810 PF04542 Sigma-70 region 2 M1S44_05825 PF00313 'Cold-shock' DNA-binding domain M1S44_05830 PF00271 Helicase conserved C-terminal domain M1S44_05830 PF00270 DEAD/DEAH box helicase M1S44_05840 PF00881 Nitroreductase family M1S44_05845 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M1S44_05845 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M1S44_05855 PF00589 Phage integrase family M1S44_05950 PF01555 DNA methylase M1S44_06185 PF01180 Dihydroorotate dehydrogenase M1S44_06190 PF02674 Colicin V production protein M1S44_06195 PF00156 Phosphoribosyl transferase domain M1S44_06210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S44_06210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S44_06215 PF01435 Peptidase family M48 M1S44_06220 PF09424 Yqey-like protein M1S44_06225 PF01165 Ribosomal protein S21 M1S44_06230 PF00814 Glycoprotease family M1S44_06250 PF00069 Protein kinase domain M1S44_06275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_06275 PF03466 LysR substrate binding domain M1S44_06280 PF00202 Aminotransferase class-III M1S44_06285 PF00171 Aldehyde dehydrogenase family M1S44_06290 PF00324 Amino acid permease M1S44_06320 PF04076 Bacterial OB fold (BOF) protein M1S44_06340 PF13610 DDE domain M1S44_06345 PF00239 Resolvase, N terminal domain M1S44_06345 PF02796 Helix-turn-helix domain of resolvase M1S44_06355 PF13610 DDE domain M1S44_06375 PF00239 Resolvase, N terminal domain M1S44_06375 PF02796 Helix-turn-helix domain of resolvase M1S44_06385 PF00239 Resolvase, N terminal domain M1S44_06385 PF02796 Helix-turn-helix domain of resolvase M1S44_06410 PF00239 Resolvase, N terminal domain M1S44_06410 PF02796 Helix-turn-helix domain of resolvase M1S44_06430 PF13610 DDE domain M1S44_06435 PF13700 Domain of unknown function (DUF4158) M1S44_06435 PF01526 Tn3 transposase DDE domain M1S44_06440 PF01526 Tn3 transposase DDE domain M1S44_06440 PF13700 Domain of unknown function (DUF4158) M1S44_06465 PF01351 Ribonuclease HII M1S44_06470 PF02599 Global regulator protein family M1S44_06475 PF01842 ACT domain M1S44_06475 PF00696 Amino acid kinase family M1S44_06475 PF13840 ACT domain M1S44_06485 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1S44_06485 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1S44_06490 PF13393 Histidyl-tRNA synthetase M1S44_06495 PF00709 Adenylosuccinate synthetase M1S44_06510 PF00248 Aldo/keto reductase family M1S44_06520 PF00027 Cyclic nucleotide-binding domain M1S44_06520 PF13545 Crp-like helix-turn-helix domain M1S44_06530 PF02566 OsmC-like protein M1S44_06545 PF00004 ATPase family associated with various cellular activities (AAA) M1S44_06545 PF07724 AAA domain (Cdc48 subfamily) M1S44_06545 PF17871 AAA lid domain M1S44_06545 PF02861 Clp amino terminal domain, pathogenicity island component M1S44_06545 PF10431 C-terminal, D2-small domain, of ClpB protein M1S44_06560 PF01170 Putative RNA methylase family UPF0020 M1S44_06560 PF10672 S-adenosylmethionine-dependent methyltransferase M1S44_06560 PF02926 THUMP domain M1S44_06575 PF01979 Amidohydrolase family M1S44_06580 PF13488 Glycine zipper M1S44_06580 PF00691 OmpA family M1S44_06590 PF00043 Glutathione S-transferase, C-terminal domain M1S44_06590 PF13417 Glutathione S-transferase, N-terminal domain M1S44_06595 PF02390 Putative methyltransferase M1S44_06605 PF02798 Glutathione S-transferase, N-terminal domain M1S44_06605 PF00043 Glutathione S-transferase, C-terminal domain M1S44_06635 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1S44_06635 PF00578 AhpC/TSA family M1S44_06640 PF11898 Domain of unknown function (DUF3418) M1S44_06640 PF04408 Helicase associated domain (HA2) M1S44_06640 PF00271 Helicase conserved C-terminal domain M1S44_06640 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M1S44_06640 PF00270 DEAD/DEAH box helicase M1S44_06645 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M1S44_06645 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M1S44_06655 PF07690 Major Facilitator Superfamily M1S44_06660 PF03594 Benzoate membrane transport protein M1S44_06665 PF00106 short chain dehydrogenase M1S44_06670 PF00970 Oxidoreductase FAD-binding domain M1S44_06670 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S44_06670 PF00175 Oxidoreductase NAD-binding domain M1S44_06675 PF00866 Ring hydroxylating beta subunit M1S44_06680 PF00355 Rieske [2Fe-2S] domain M1S44_06680 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S44_06690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_06690 PF03466 LysR substrate binding domain M1S44_06700 PF00403 Heavy-metal-associated domain M1S44_06705 PF00376 MerR family regulatory protein M1S44_06705 PF09278 MerR, DNA binding M1S44_06740 PF02601 Exonuclease VII, large subunit M1S44_06740 PF13742 OB-fold nucleic acid binding domain M1S44_06770 PF01810 LysE type translocator M1S44_06775 PF00313 'Cold-shock' DNA-binding domain M1S44_06785 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S44_06785 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S44_06810 PF07690 Major Facilitator Superfamily M1S44_06815 PF01638 HxlR-like helix-turn-helix M1S44_06840 PF09190 DALR domain M1S44_06840 PF01406 tRNA synthetases class I (C) catalytic domain M1S44_06845 PF01380 SIS domain M1S44_06845 PF00571 CBS domain M1S44_06860 PF03968 OstA-like protein M1S44_06865 PF12399 Branched-chain amino acid ATP-binding cassette transporter M1S44_06865 PF00005 ABC transporter M1S44_06870 PF02321 Outer membrane efflux protein M1S44_06875 PF03412 Peptidase C39 family M1S44_06875 PF00005 ABC transporter M1S44_06875 PF00664 ABC transporter transmembrane region M1S44_06885 PF01205 Uncharacterized protein family UPF0029 M1S44_06890 PF00132 Bacterial transferase hexapeptide (six repeats) M1S44_06900 PF01596 O-methyltransferase M1S44_06910 PF11953 Domain of unknown function (DUF3470) M1S44_06910 PF00037 4Fe-4S binding domain M1S44_06920 PF01624 MutS domain I M1S44_06920 PF05190 MutS family domain IV M1S44_06920 PF05188 MutS domain II M1S44_06920 PF05192 MutS domain III M1S44_06920 PF00488 MutS domain V M1S44_06925 PF01037 Lrp/AsnC ligand binding domain M1S44_06930 PF00892 EamA-like transporter family M1S44_06935 PF00990 Diguanylate cyclase, GGDEF domain M1S44_06935 PF03707 Bacterial signalling protein N terminal repeat M1S44_06935 PF00563 EAL domain M1S44_06940 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S44_06955 PF07690 Major Facilitator Superfamily M1S44_06975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S44_06975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S44_06995 PF13419 Haloacid dehalogenase-like hydrolase M1S44_07005 PF13296 Putative type VI secretion system Rhs element Vgr M1S44_07005 PF04717 Type VI secretion system, phage-baseplate injector M1S44_07005 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S44_07010 PF03527 RHS protein M1S44_07010 PF05593 RHS Repeat M1S44_07025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_07025 PF03466 LysR substrate binding domain M1S44_07030 PF01566 Natural resistance-associated macrophage protein M1S44_07035 PF03746 LamB/YcsF family M1S44_07040 PF07286 Protein of unknown function (DUF1445) M1S44_07050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S44_07050 PF00289 Biotin carboxylase, N-terminal domain M1S44_07050 PF02785 Biotin carboxylase C-terminal domain M1S44_07050 PF00364 Biotin-requiring enzyme M1S44_07055 PF00654 Voltage gated chloride channel M1S44_07075 PF00440 Bacterial regulatory proteins, tetR family M1S44_07085 PF00107 Zinc-binding dehydrogenase M1S44_07085 PF13823 Alcohol dehydrogenase GroES-associated M1S44_07085 PF08240 Alcohol dehydrogenase GroES-like domain M1S44_07100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S44_07100 PF00289 Biotin carboxylase, N-terminal domain M1S44_07100 PF02785 Biotin carboxylase C-terminal domain M1S44_07105 PF02525 Flavodoxin-like fold M1S44_07125 PF01402 Ribbon-helix-helix protein, copG family M1S44_07125 PF08753 NikR C terminal nickel binding domain M1S44_07130 PF01425 Amidase M1S44_07135 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S44_07140 PF00005 ABC transporter M1S44_07165 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M1S44_07180 PF05947 Type VI secretion system, TssF M1S44_07195 PF06761 Intracellular multiplication and human macrophage-killing M1S44_07195 PF14331 ImcF-related N-terminal domain M1S44_07195 PF06744 Type VI secretion protein IcmF C-terminal M1S44_07205 PF00691 OmpA family M1S44_07205 PF01389 OmpA-like transmembrane domain M1S44_07220 PF10431 C-terminal, D2-small domain, of ClpB protein M1S44_07220 PF17871 AAA lid domain M1S44_07220 PF07724 AAA domain (Cdc48 subfamily) M1S44_07220 PF00004 ATPase family associated with various cellular activities (AAA) M1S44_07225 PF06812 ImpA, N-terminal, type VI secretion system M1S44_07230 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M1S44_07250 PF03466 LysR substrate binding domain M1S44_07250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_07260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S44_07265 PF07690 Major Facilitator Superfamily M1S44_07280 PF02677 Epoxyqueuosine reductase QueH M1S44_07295 PF00376 MerR family regulatory protein M1S44_07295 PF09278 MerR, DNA binding M1S44_07305 PF00701 Dihydrodipicolinate synthetase family M1S44_07315 PF00392 Bacterial regulatory proteins, gntR family M1S44_07320 PF05544 Proline racemase M1S44_07325 PF01266 FAD dependent oxidoreductase M1S44_07335 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_07335 PF04324 BFD-like [2Fe-2S] binding domain M1S44_07345 PF00083 Sugar (and other) transporter M1S44_07350 PF00171 Aldehyde dehydrogenase family M1S44_07355 PF13520 Amino acid permease M1S44_07360 PF03315 Serine dehydratase beta chain M1S44_07360 PF03313 Serine dehydratase alpha chain M1S44_07365 PF01575 MaoC like domain M1S44_07365 PF00171 Aldehyde dehydrogenase family M1S44_07370 PF05138 Phenylacetic acid catabolic protein M1S44_07375 PF06243 Phenylacetic acid degradation B M1S44_07380 PF05138 Phenylacetic acid catabolic protein M1S44_07385 PF01883 Iron-sulfur cluster assembly protein M1S44_07390 PF00970 Oxidoreductase FAD-binding domain M1S44_07390 PF00175 Oxidoreductase NAD-binding domain M1S44_07390 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S44_07395 PF00378 Enoyl-CoA hydratase/isomerase M1S44_07400 PF00378 Enoyl-CoA hydratase/isomerase M1S44_07405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S44_07405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S44_07405 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S44_07410 PF00108 Thiolase, N-terminal domain M1S44_07410 PF02803 Thiolase, C-terminal domain M1S44_07415 PF14535 AMP-binding enzyme C-terminal domain M1S44_07415 PF00501 AMP-binding enzyme M1S44_07420 PF08223 PaaX-like protein C-terminal domain M1S44_07420 PF07848 PaaX-like protein M1S44_07425 PF00132 Bacterial transferase hexapeptide (six repeats) M1S44_07430 PF03061 Thioesterase superfamily M1S44_07465 PF00199 Catalase M1S44_07470 PF01292 Prokaryotic cytochrome b561 M1S44_07490 PF12697 Alpha/beta hydrolase family M1S44_07495 PF01613 Flavin reductase like domain M1S44_07500 PF00296 Luciferase-like monooxygenase M1S44_07505 PF00171 Aldehyde dehydrogenase family M1S44_07515 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S44_07525 PF00171 Aldehyde dehydrogenase family M1S44_07530 PF02627 Carboxymuconolactone decarboxylase family M1S44_07535 PF03466 LysR substrate binding domain M1S44_07535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_07540 PF02525 Flavodoxin-like fold M1S44_07545 PF01614 Bacterial transcriptional regulator M1S44_07545 PF09339 IclR helix-turn-helix domain M1S44_07550 PF01494 FAD binding domain M1S44_07555 PF00392 Bacterial regulatory proteins, gntR family M1S44_07555 PF07702 UTRA domain M1S44_07565 PF08402 TOBE domain M1S44_07565 PF00005 ABC transporter M1S44_07570 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_07575 PF01266 FAD dependent oxidoreductase M1S44_07580 PF00266 Aminotransferase class-V M1S44_07585 PF13419 Haloacid dehalogenase-like hydrolase M1S44_07590 PF07690 Major Facilitator Superfamily M1S44_07595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_07595 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_07595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_07600 PF02515 CoA-transferase family III M1S44_07605 PF09339 IclR helix-turn-helix domain M1S44_07610 PF00378 Enoyl-CoA hydratase/isomerase M1S44_07615 PF03060 Nitronate monooxygenase M1S44_07620 PF07690 Major Facilitator Superfamily M1S44_07625 PF09339 IclR helix-turn-helix domain M1S44_07630 PF02803 Thiolase, C-terminal domain M1S44_07630 PF00108 Thiolase, N-terminal domain M1S44_07635 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M1S44_07635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S44_07635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S44_07645 PF00378 Enoyl-CoA hydratase/isomerase M1S44_07650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_07650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_07650 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_07655 PF07690 Major Facilitator Superfamily M1S44_07660 PF01144 Coenzyme A transferase M1S44_07665 PF01144 Coenzyme A transferase M1S44_07675 PF07690 Major Facilitator Superfamily M1S44_07685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_07685 PF12806 Acetyl-CoA dehydrogenase C-terminal like M1S44_07685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_07685 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_07700 PF03466 LysR substrate binding domain M1S44_07700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_07705 PF00682 HMGL-like M1S44_07710 PF02785 Biotin carboxylase C-terminal domain M1S44_07710 PF00289 Biotin carboxylase, N-terminal domain M1S44_07710 PF00364 Biotin-requiring enzyme M1S44_07710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S44_07710 PF18140 Propionyl-coenzyme A carboxylase BT domain M1S44_07715 PF00378 Enoyl-CoA hydratase/isomerase M1S44_07720 PF01039 Carboxyl transferase domain M1S44_07725 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_07725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_07725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_07730 PF00440 Bacterial regulatory proteins, tetR family M1S44_07735 PF13193 AMP-binding enzyme C-terminal domain M1S44_07735 PF00501 AMP-binding enzyme M1S44_07760 PF03466 LysR substrate binding domain M1S44_07760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_07795 PF00994 Probable molybdopterin binding domain M1S44_07795 PF18146 Damage-inducible protein CinA KH domain M1S44_07795 PF02464 Competence-damaged protein M1S44_07805 PF18011 C-terminal domain found in long catalases M1S44_07805 PF06628 Catalase-related immune-responsive M1S44_07805 PF00199 Catalase M1S44_07830 PF00717 Peptidase S24-like M1S44_07840 PF13404 AsnC-type helix-turn-helix domain M1S44_07840 PF01037 Lrp/AsnC ligand binding domain M1S44_07850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_07850 PF00072 Response regulator receiver domain M1S44_07850 PF00512 His Kinase A (phospho-acceptor) domain M1S44_07850 PF09308 LuxQ, periplasmic M1S44_07855 PF00072 Response regulator receiver domain M1S44_07870 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_07875 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_07880 PF00005 ABC transporter M1S44_07885 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S44_07890 PF00497 Bacterial extracellular solute-binding proteins, family 3 M1S44_07900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_07900 PF03466 LysR substrate binding domain M1S44_07905 PF01810 LysE type translocator M1S44_07915 PF00266 Aminotransferase class-V M1S44_07925 PF00132 Bacterial transferase hexapeptide (six repeats) M1S44_07930 PF00581 Rhodanese-like domain M1S44_07940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_07940 PF03466 LysR substrate binding domain M1S44_07945 PF02798 Glutathione S-transferase, N-terminal domain M1S44_07950 PF02798 Glutathione S-transferase, N-terminal domain M1S44_07950 PF14834 Glutathione S-transferase, C-terminal domain M1S44_07955 PF03466 LysR substrate binding domain M1S44_07955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_07960 PF03788 LrgA family M1S44_07965 PF04172 LrgB-like family M1S44_07970 PF00392 Bacterial regulatory proteins, gntR family M1S44_07970 PF00155 Aminotransferase class I and II M1S44_07985 PF07690 Major Facilitator Superfamily M1S44_07990 PF16957 Malonate decarboxylase, alpha subunit, transporter M1S44_07995 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M1S44_08000 PF06857 Malonate decarboxylase delta subunit (MdcD) M1S44_08005 PF01039 Carboxyl transferase domain M1S44_08015 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M1S44_08020 PF00698 Acyl transferase domain M1S44_08035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_08035 PF03466 LysR substrate binding domain M1S44_08040 PF00155 Aminotransferase class I and II M1S44_08040 PF00392 Bacterial regulatory proteins, gntR family M1S44_08050 PF02322 Cytochrome bd terminal oxidase subunit II M1S44_08055 PF01654 Cytochrome bd terminal oxidase subunit I M1S44_08070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_08070 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_08070 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S44_08075 PF00296 Luciferase-like monooxygenase M1S44_08080 PF00083 Sugar (and other) transporter M1S44_08090 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S44_08095 PF00005 ABC transporter M1S44_08100 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_08105 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M1S44_08110 PF01177 Asp/Glu/Hydantoin racemase M1S44_08115 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S44_08125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_08125 PF03466 LysR substrate binding domain M1S44_08135 PF13382 Adenine deaminase C-terminal domain M1S44_08135 PF01979 Amidohydrolase family M1S44_08145 PF03960 ArsC family M1S44_08150 PF01022 Bacterial regulatory protein, arsR family M1S44_08155 PF01758 Sodium Bile acid symporter family M1S44_08160 PF03466 LysR substrate binding domain M1S44_08160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_08190 PF00132 Bacterial transferase hexapeptide (six repeats) M1S44_08195 PF00588 SpoU rRNA Methylase family M1S44_08200 PF01336 OB-fold nucleic acid binding domain M1S44_08200 PF02811 PHP domain M1S44_08200 PF14579 Helix-hairpin-helix motif M1S44_08200 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1S44_08200 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1S44_08205 PF17763 Glutaminase/Asparaginase C-terminal domain M1S44_08205 PF00710 Asparaginase, N-terminal M1S44_08210 PF00375 Sodium:dicarboxylate symporter family M1S44_08215 PF00155 Aminotransferase class I and II M1S44_08220 PF01641 SelR domain M1S44_08225 PF00255 Glutathione peroxidase M1S44_08230 PF12833 Helix-turn-helix domain M1S44_08230 PF12852 Cupin M1S44_08240 PF00155 Aminotransferase class I and II M1S44_08245 PF01966 HD domain M1S44_08245 PF08335 GlnD PII-uridylyltransferase M1S44_08245 PF01909 Nucleotidyltransferase domain M1S44_08250 PF02222 ATP-grasp domain M1S44_08260 PF05437 Branched-chain amino acid transport protein (AzlD) M1S44_08265 PF03591 AzlC protein M1S44_08290 PF01926 50S ribosome-binding GTPase M1S44_08290 PF06071 Protein of unknown function (DUF933) M1S44_08295 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_08300 PF09383 NIL domain M1S44_08300 PF00005 ABC transporter M1S44_08305 PF03180 NLPA lipoprotein M1S44_08310 PF03180 NLPA lipoprotein M1S44_08315 PF00296 Luciferase-like monooxygenase M1S44_08325 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S44_08325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_08340 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_08345 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_08350 PF00005 ABC transporter M1S44_08365 PF01037 Lrp/AsnC ligand binding domain M1S44_08370 PF01709 Transcriptional regulator M1S44_08380 PF00440 Bacterial regulatory proteins, tetR family M1S44_08400 PF03466 LysR substrate binding domain M1S44_08400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_08410 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M1S44_08420 PF00892 EamA-like transporter family M1S44_08440 PF13953 PapC C-terminal domain M1S44_08440 PF13954 PapC N-terminal domain M1S44_08440 PF00577 Outer membrane usher protein M1S44_08445 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S44_08445 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S44_08450 PF16970 Type-1 fimbrial protein, A M1S44_08465 PF06968 Biotin and Thiamin Synthesis associated domain M1S44_08465 PF04055 Radical SAM superfamily M1S44_08470 PF08331 Domain of unknown function (DUF1730) M1S44_08475 PF01256 Carbohydrate kinase M1S44_08475 PF03853 YjeF-related protein N-terminus M1S44_08480 PF02075 Crossover junction endodeoxyribonuclease RuvC M1S44_08495 PF00905 Penicillin binding protein transpeptidase domain M1S44_08515 PF02773 S-adenosylmethionine synthetase, C-terminal domain M1S44_08515 PF00438 S-adenosylmethionine synthetase, N-terminal domain M1S44_08515 PF02772 S-adenosylmethionine synthetase, central domain M1S44_08520 PF02780 Transketolase, C-terminal domain M1S44_08520 PF00456 Transketolase, thiamine diphosphate binding domain M1S44_08520 PF02779 Transketolase, pyrimidine binding domain M1S44_08530 PF04264 YceI-like domain M1S44_08540 PF09992 Phosphodiester glycosidase M1S44_08550 PF05958 tRNA (Uracil-5-)-methyltransferase M1S44_08555 PF04229 GrpB protein M1S44_08560 PF00171 Aldehyde dehydrogenase family M1S44_08560 PF01619 Proline dehydrogenase M1S44_08560 PF14850 DNA-binding domain of Proline dehydrogenase M1S44_08560 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M1S44_08565 PF01037 Lrp/AsnC ligand binding domain M1S44_08570 PF00474 Sodium:solute symporter family M1S44_08575 PF02146 Sir2 family M1S44_08580 PF01597 Glycine cleavage H-protein M1S44_08585 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S44_08585 PF12833 Helix-turn-helix domain M1S44_08595 PF00664 ABC transporter transmembrane region M1S44_08595 PF00005 ABC transporter M1S44_08600 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M1S44_08605 PF06912 Protein of unknown function (DUF1275) M1S44_08610 PF00375 Sodium:dicarboxylate symporter family M1S44_08625 PF08007 Cupin superfamily protein M1S44_08630 PF02545 Maf-like protein M1S44_08640 PF00162 Phosphoglycerate kinase M1S44_08650 PF01116 Fructose-bisphosphate aldolase class-II M1S44_08655 PF00639 PPIC-type PPIASE domain M1S44_08655 PF09312 SurA N-terminal domain M1S44_08660 PF04453 LPS transport system D M1S44_08660 PF03968 OstA-like protein M1S44_08665 PF01636 Phosphotransferase enzyme family M1S44_08670 PF00483 Nucleotidyl transferase M1S44_08675 PF02527 rRNA small subunit methyltransferase G M1S44_08680 PF13614 AAA domain M1S44_08685 PF17762 HTH domain found in ParB protein M1S44_08685 PF02195 ParB-like nuclease domain M1S44_08690 PF01618 MotA/TolQ/ExbB proton channel family M1S44_08700 PF00664 ABC transporter transmembrane region M1S44_08700 PF00005 ABC transporter M1S44_08705 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M1S44_08710 PF02348 Cytidylyltransferase M1S44_08715 PF09115 DNA polymerase III, delta subunit, C terminal M1S44_08725 PF01026 TatD related DNase M1S44_08740 PF07963 Prokaryotic N-terminal methylation motif M1S44_08740 PF02501 Type II secretion system (T2SS), protein I M1S44_08745 PF11612 Type II secretion system (T2SS), protein J M1S44_08745 PF07963 Prokaryotic N-terminal methylation motif M1S44_08750 PF03934 Type II secretion system (T2SS), protein K M1S44_08760 PF03167 Uracil DNA glycosylase superfamily M1S44_08770 PF14437 MafB19-like deaminase M1S44_08780 PF02224 Cytidylate kinase M1S44_08785 PF00575 S1 RNA binding domain M1S44_08790 PF00216 Bacterial DNA-binding protein M1S44_08800 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M1S44_08810 PF00743 Flavin-binding monooxygenase-like M1S44_08820 PF03969 AFG1-like ATPase M1S44_08825 PF02899 Phage integrase, N-terminal SAM-like domain M1S44_08825 PF00589 Phage integrase family M1S44_08915 PF03592 Terminase small subunit M1S44_08915 PF10668 Phage terminase small subunit M1S44_09035 PF01274 Malate synthase M1S44_09045 PF02472 Biopolymer transport protein ExbD/TolR M1S44_09050 PF02472 Biopolymer transport protein ExbD/TolR M1S44_09055 PF01618 MotA/TolQ/ExbB proton channel family M1S44_09085 PF01432 Peptidase family M3 M1S44_09090 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_09095 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_09100 PF00005 ABC transporter M1S44_09100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S44_09115 PF00459 Inositol monophosphatase family M1S44_09125 PF01649 Ribosomal protein S20 M1S44_09130 PF13460 NAD(P)H-binding M1S44_09135 PF03737 Aldolase/RraA M1S44_09165 PF02559 CarD-like/TRCF domain M1S44_09165 PF17757 UvrB interaction domain M1S44_09165 PF03461 TRCF domain M1S44_09165 PF00271 Helicase conserved C-terminal domain M1S44_09165 PF00270 DEAD/DEAH box helicase M1S44_09175 PF00211 Adenylate and Guanylate cyclase catalytic domain M1S44_09180 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S44_09185 PF00012 Hsp70 protein M1S44_09190 PF00226 DnaJ domain M1S44_09190 PF07743 HSCB C-terminal oligomerisation domain M1S44_09195 PF01521 Iron-sulphur cluster biosynthesis M1S44_09200 PF01592 NifU-like N terminal domain M1S44_09205 PF00266 Aminotransferase class-V M1S44_09210 PF02082 Transcriptional regulator M1S44_09225 PF00216 Bacterial DNA-binding protein M1S44_09230 PF00639 PPIC-type PPIASE domain M1S44_09230 PF09312 SurA N-terminal domain M1S44_09235 PF12833 Helix-turn-helix domain M1S44_09235 PF12852 Cupin M1S44_09240 PF00487 Fatty acid desaturase M1S44_09245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_09245 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_09245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_09250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_09250 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_09250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_09255 PF03109 ABC1 family M1S44_09265 PF04073 Aminoacyl-tRNA editing domain M1S44_09270 PF04183 IucA / IucC family M1S44_09270 PF06276 Ferric iron reductase FhuF-like transporter M1S44_09275 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M1S44_09280 PF07690 Major Facilitator Superfamily M1S44_09285 PF06276 Ferric iron reductase FhuF-like transporter M1S44_09285 PF04183 IucA / IucC family M1S44_09290 PF06276 Ferric iron reductase FhuF-like transporter M1S44_09290 PF04183 IucA / IucC family M1S44_09305 PF07715 TonB-dependent Receptor Plug Domain M1S44_09305 PF00593 TonB dependent receptor M1S44_09330 PF13419 Haloacid dehalogenase-like hydrolase M1S44_09340 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M1S44_09345 PF02277 Phosphoribosyltransferase M1S44_09360 PF02654 Cobalamin-5-phosphate synthase M1S44_09365 PF00793 DAHP synthetase I family M1S44_09370 PF01925 Sulfite exporter TauE/SafE M1S44_09390 PF07715 TonB-dependent Receptor Plug Domain M1S44_09390 PF00593 TonB dependent receptor M1S44_09395 PF02684 Lipid-A-disaccharide synthetase M1S44_09405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S44_09410 PF00005 ABC transporter M1S44_09445 PF01230 HIT domain M1S44_09475 PF08241 Methyltransferase domain M1S44_09480 PF00561 alpha/beta hydrolase fold M1S44_09485 PF01053 Cys/Met metabolism PLP-dependent enzyme M1S44_09495 PF02575 YbaB/EbfC DNA-binding family M1S44_09500 PF02132 RecR protein M1S44_09500 PF13662 Toprim domain M1S44_09505 PF01612 3'-5' exonuclease M1S44_09505 PF00570 HRDC domain M1S44_09525 PF05166 YcgL domain M1S44_09535 PF17862 AAA+ lid domain M1S44_09535 PF00004 ATPase family associated with various cellular activities (AAA) M1S44_09535 PF01434 Peptidase family M41 M1S44_09545 PF00291 Pyridoxal-phosphate dependent enzyme M1S44_09550 PF05175 Methyltransferase small domain M1S44_09555 PF01264 Chorismate synthase M1S44_09560 PF08448 PAS fold M1S44_09560 PF00990 Diguanylate cyclase, GGDEF domain M1S44_09575 PF04055 Radical SAM superfamily M1S44_09580 PF00676 Dehydrogenase E1 component M1S44_09585 PF02779 Transketolase, pyrimidine binding domain M1S44_09585 PF02780 Transketolase, C-terminal domain M1S44_09590 PF02817 e3 binding domain M1S44_09590 PF00364 Biotin-requiring enzyme M1S44_09590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1S44_09595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1S44_09595 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_09600 PF00106 short chain dehydrogenase M1S44_09605 PF08240 Alcohol dehydrogenase GroES-like domain M1S44_09605 PF00107 Zinc-binding dehydrogenase M1S44_09610 PF01062 Bestrophin, RFP-TM, chloride channel M1S44_09615 PF00158 Sigma-54 interaction domain M1S44_09615 PF00072 Response regulator receiver domain M1S44_09615 PF02954 Bacterial regulatory protein, Fis family M1S44_09620 PF04273 Putative phosphatase (DUF442) M1S44_09620 PF00753 Metallo-beta-lactamase superfamily M1S44_09635 PF01925 Sulfite exporter TauE/SafE M1S44_09650 PF06445 GyrI-like small molecule binding domain M1S44_09650 PF12833 Helix-turn-helix domain M1S44_09655 PF01638 HxlR-like helix-turn-helix M1S44_09660 PF02525 Flavodoxin-like fold M1S44_09670 PF07702 UTRA domain M1S44_09670 PF00392 Bacterial regulatory proteins, gntR family M1S44_09685 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M1S44_09690 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_09695 PF00005 ABC transporter M1S44_09710 PF00083 Sugar (and other) transporter M1S44_09715 PF00593 TonB dependent receptor M1S44_09715 PF07715 TonB-dependent Receptor Plug Domain M1S44_09720 PF10415 Fumarase C C-terminus M1S44_09720 PF00206 Lyase M1S44_09735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_09735 PF03466 LysR substrate binding domain M1S44_09740 PF03466 LysR substrate binding domain M1S44_09740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_09745 PF02803 Thiolase, C-terminal domain M1S44_09745 PF00108 Thiolase, N-terminal domain M1S44_09750 PF02667 Short chain fatty acid transporter M1S44_09755 PF01144 Coenzyme A transferase M1S44_09760 PF01144 Coenzyme A transferase M1S44_09765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_09765 PF03466 LysR substrate binding domain M1S44_09790 PF06719 AraC-type transcriptional regulator N-terminus M1S44_09790 PF12833 Helix-turn-helix domain M1S44_09795 PF07690 Major Facilitator Superfamily M1S44_09800 PF01738 Dienelactone hydrolase family M1S44_09815 PF01613 Flavin reductase like domain M1S44_09825 PF14525 AraC-binding-like domain M1S44_09825 PF12833 Helix-turn-helix domain M1S44_09830 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S44_09830 PF00175 Oxidoreductase NAD-binding domain M1S44_09830 PF00970 Oxidoreductase FAD-binding domain M1S44_09835 PF00866 Ring hydroxylating beta subunit M1S44_09840 PF00355 Rieske [2Fe-2S] domain M1S44_09840 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S44_09845 PF03459 TOBE domain M1S44_09845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_09855 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_09860 PF00005 ABC transporter M1S44_09860 PF03459 TOBE domain M1S44_09865 PF00106 short chain dehydrogenase M1S44_09870 PF00550 Phosphopantetheine attachment site M1S44_09870 PF00857 Isochorismatase family M1S44_09880 PF00149 Calcineurin-like phosphoesterase M1S44_09885 PF13089 Polyphosphate kinase N-terminal domain M1S44_09885 PF02503 Polyphosphate kinase middle domain M1S44_09885 PF13090 Polyphosphate kinase C-terminal domain 2 M1S44_09885 PF17941 Polyphosphate kinase C-terminal domain 1 M1S44_09890 PF08042 PqqA family M1S44_09895 PF12706 Beta-lactamase superfamily domain M1S44_09900 PF03070 TENA/THI-4/PQQC family M1S44_09905 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M1S44_09910 PF04055 Radical SAM superfamily M1S44_09910 PF13186 Iron-sulfur cluster-binding domain M1S44_09915 PF01244 Membrane dipeptidase (Peptidase family M19) M1S44_09930 PF13091 PLD-like domain M1S44_09945 PF00199 Catalase M1S44_09955 PF00107 Zinc-binding dehydrogenase M1S44_09955 PF08240 Alcohol dehydrogenase GroES-like domain M1S44_09965 PF00419 Fimbrial protein M1S44_09970 PF00577 Outer membrane usher protein M1S44_09970 PF13954 PapC N-terminal domain M1S44_09970 PF13953 PapC C-terminal domain M1S44_09975 PF02753 Pili assembly chaperone PapD, C-terminal domain M1S44_09975 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M1S44_09985 PF16970 Type-1 fimbrial protein, A M1S44_10005 PF01266 FAD dependent oxidoreductase M1S44_10020 PF01593 Flavin containing amine oxidoreductase M1S44_10025 PF00743 Flavin-binding monooxygenase-like M1S44_10030 PF12146 Serine aminopeptidase, S33 M1S44_10035 PF02321 Outer membrane efflux protein M1S44_10040 PF00873 AcrB/AcrD/AcrF family M1S44_10045 PF00529 HlyD membrane-fusion protein of T1SS M1S44_10045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S44_10050 PF00072 Response regulator receiver domain M1S44_10050 PF00486 Transcriptional regulatory protein, C terminal M1S44_10055 PF16527 Two-component sensor protein CpxA, periplasmic domain M1S44_10055 PF00672 HAMP domain M1S44_10055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_10055 PF00512 His Kinase A (phospho-acceptor) domain M1S44_10070 PF12833 Helix-turn-helix domain M1S44_10070 PF02311 AraC-like ligand binding domain M1S44_10075 PF12146 Serine aminopeptidase, S33 M1S44_10125 PF13291 ACT domain M1S44_10125 PF04607 Region found in RelA / SpoT proteins M1S44_10125 PF02824 TGS domain M1S44_10135 PF01975 Survival protein SurE M1S44_10160 PF07690 Major Facilitator Superfamily M1S44_10165 PF13533 Biotin-lipoyl like M1S44_10170 PF01425 Amidase M1S44_10175 PF00196 Bacterial regulatory proteins, luxR family M1S44_10250 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M1S44_10255 PF14572 Phosphoribosyl synthetase-associated domain M1S44_10255 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S44_10275 PF00005 ABC transporter M1S44_10280 PF01032 FecCD transport family M1S44_10290 PF08240 Alcohol dehydrogenase GroES-like domain M1S44_10290 PF00107 Zinc-binding dehydrogenase M1S44_10305 PF06719 AraC-type transcriptional regulator N-terminus M1S44_10305 PF12833 Helix-turn-helix domain M1S44_10310 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S44_10310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S44_10315 PF07690 Major Facilitator Superfamily M1S44_10320 PF01370 NAD dependent epimerase/dehydratase family M1S44_10325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_10325 PF03466 LysR substrate binding domain M1S44_10335 PF00920 Dehydratase family M1S44_10340 PF00171 Aldehyde dehydrogenase family M1S44_10355 PF00529 HlyD membrane-fusion protein of T1SS M1S44_10355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S44_10390 PF03737 Aldolase/RraA M1S44_10395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1S44_10395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1S44_10395 PF01842 ACT domain M1S44_10400 PF07690 Major Facilitator Superfamily M1S44_10420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_10420 PF03466 LysR substrate binding domain M1S44_10430 PF08450 SMP-30/Gluconolactonase/LRE-like region M1S44_10435 PF07702 UTRA domain M1S44_10435 PF00392 Bacterial regulatory proteins, gntR family M1S44_10445 PF04909 Amidohydrolase M1S44_10450 PF07690 Major Facilitator Superfamily M1S44_10465 PF04829 Pre-toxin domain with VENN motif M1S44_10465 PF05860 haemagglutination activity domain M1S44_10465 PF13018 Extended Signal Peptide of Type V secretion system M1S44_10465 PF13332 Hemagglutinin repeat M1S44_10470 PF08479 POTRA domain, ShlB-type M1S44_10470 PF17287 POTRA domain M1S44_10470 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M1S44_10480 PF07687 Peptidase dimerisation domain M1S44_10480 PF01546 Peptidase family M20/M25/M40 M1S44_10490 PF00999 Sodium/hydrogen exchanger family M1S44_10490 PF02254 TrkA-N domain M1S44_10495 PF07995 Glucose / Sorbosone dehydrogenase M1S44_10500 PF03466 LysR substrate binding domain M1S44_10500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_10505 PF00857 Isochorismatase family M1S44_10515 PF08359 YsiA-like protein, C-terminal region M1S44_10515 PF00440 Bacterial regulatory proteins, tetR family M1S44_10520 PF12706 Beta-lactamase superfamily domain M1S44_10530 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_10540 PF00376 MerR family regulatory protein M1S44_10540 PF09278 MerR, DNA binding M1S44_10545 PF01872 RibD C-terminal domain M1S44_10550 PF00106 short chain dehydrogenase M1S44_10555 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S44_10555 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_10560 PF01047 MarR family M1S44_10565 PF07859 alpha/beta hydrolase fold M1S44_10580 PF00199 Catalase M1S44_10580 PF06628 Catalase-related immune-responsive M1S44_10585 PF00561 alpha/beta hydrolase fold M1S44_10595 PF00171 Aldehyde dehydrogenase family M1S44_10600 PF08240 Alcohol dehydrogenase GroES-like domain M1S44_10600 PF00107 Zinc-binding dehydrogenase M1S44_10605 PF00474 Sodium:solute symporter family M1S44_10610 PF04341 Protein of unknown function, DUF485 M1S44_10615 PF00501 AMP-binding enzyme M1S44_10615 PF13193 AMP-binding enzyme C-terminal domain M1S44_10620 PF02954 Bacterial regulatory protein, Fis family M1S44_10620 PF06506 Propionate catabolism activator M1S44_10620 PF00158 Sigma-54 interaction domain M1S44_10630 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_10630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_10630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_10650 PF00171 Aldehyde dehydrogenase family M1S44_10660 PF07690 Major Facilitator Superfamily M1S44_10665 PF00920 Dehydratase family M1S44_10670 PF07729 FCD domain M1S44_10670 PF00392 Bacterial regulatory proteins, gntR family M1S44_10680 PF03466 LysR substrate binding domain M1S44_10680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_10685 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M1S44_10685 PF13378 Enolase C-terminal domain-like M1S44_10690 PF02426 Muconolactone delta-isomerase M1S44_10695 PF00775 Dioxygenase M1S44_10695 PF04444 Catechol dioxygenase N terminus M1S44_10700 PF01144 Coenzyme A transferase M1S44_10705 PF01144 Coenzyme A transferase M1S44_10710 PF02803 Thiolase, C-terminal domain M1S44_10710 PF00108 Thiolase, N-terminal domain M1S44_10715 PF12146 Serine aminopeptidase, S33 M1S44_10720 PF01804 Penicillin amidase M1S44_10725 PF00171 Aldehyde dehydrogenase family M1S44_10735 PF02728 Copper amine oxidase, N3 domain M1S44_10735 PF01179 Copper amine oxidase, enzyme domain M1S44_10735 PF02727 Copper amine oxidase, N2 domain M1S44_10735 PF07833 Copper amine oxidase N-terminal domain M1S44_10740 PF02311 AraC-like ligand binding domain M1S44_10740 PF12833 Helix-turn-helix domain M1S44_10745 PF01613 Flavin reductase like domain M1S44_10750 PF00175 Oxidoreductase NAD-binding domain M1S44_10750 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S44_10765 PF00355 Rieske [2Fe-2S] domain M1S44_10765 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S44_10780 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S44_10785 PF01425 Amidase M1S44_10795 PF07690 Major Facilitator Superfamily M1S44_10805 PF00106 short chain dehydrogenase M1S44_10820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_10820 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_10820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_10825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_10825 PF03466 LysR substrate binding domain M1S44_10830 PF01614 Bacterial transcriptional regulator M1S44_10830 PF09339 IclR helix-turn-helix domain M1S44_10835 PF00753 Metallo-beta-lactamase superfamily M1S44_10845 PF04143 Sulphur transport M1S44_10855 PF13360 PQQ-like domain M1S44_10855 PF01011 PQQ enzyme repeat M1S44_10860 PF04966 Carbohydrate-selective porin, OprB family M1S44_10865 PF05048 Periplasmic copper-binding protein (NosD) M1S44_10870 PF01487 Type I 3-dehydroquinase M1S44_10875 PF00775 Dioxygenase M1S44_10880 PF00775 Dioxygenase M1S44_10880 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M1S44_10885 PF02627 Carboxymuconolactone decarboxylase family M1S44_10890 PF07690 Major Facilitator Superfamily M1S44_10895 PF00561 alpha/beta hydrolase fold M1S44_10900 PF10397 Adenylosuccinate lyase C-terminus M1S44_10900 PF00206 Lyase M1S44_10905 PF02803 Thiolase, C-terminal domain M1S44_10905 PF00108 Thiolase, N-terminal domain M1S44_10910 PF01144 Coenzyme A transferase M1S44_10915 PF01144 Coenzyme A transferase M1S44_10920 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M1S44_10925 PF04977 Septum formation initiator M1S44_10930 PF04239 Protein of unknown function (DUF421) M1S44_10935 PF03952 Enolase, N-terminal domain M1S44_10935 PF00113 Enolase, C-terminal TIM barrel domain M1S44_10940 PF00793 DAHP synthetase I family M1S44_10945 PF00117 Glutamine amidotransferase class-I M1S44_10945 PF06418 CTP synthase N-terminus M1S44_10975 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_10975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S44_10990 PF00793 DAHP synthetase I family M1S44_10995 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M1S44_11000 PF02861 Clp amino terminal domain, pathogenicity island component M1S44_11000 PF10431 C-terminal, D2-small domain, of ClpB protein M1S44_11000 PF07724 AAA domain (Cdc48 subfamily) M1S44_11000 PF17871 AAA lid domain M1S44_11000 PF00004 ATPase family associated with various cellular activities (AAA) M1S44_11005 PF02617 ATP-dependent Clp protease adaptor protein ClpS M1S44_11015 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S44_11015 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S44_11030 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M1S44_11035 PF00291 Pyridoxal-phosphate dependent enzyme M1S44_11035 PF00585 C-terminal regulatory domain of Threonine dehydratase M1S44_11040 PF02254 TrkA-N domain M1S44_11040 PF02080 TrkA-C domain M1S44_11045 PF02386 Cation transport protein M1S44_11050 PF02253 Phospholipase A1 M1S44_11055 PF05193 Peptidase M16 inactive domain M1S44_11055 PF00675 Insulinase (Peptidase family M16) M1S44_11055 PF08367 Peptidase M16C associated M1S44_11060 PF00593 TonB dependent receptor M1S44_11060 PF07715 TonB-dependent Receptor Plug Domain M1S44_11065 PF00294 pfkB family carbohydrate kinase M1S44_11075 PF07290 Protein of unknown function (DUF1449) M1S44_11085 PF01654 Cytochrome bd terminal oxidase subunit I M1S44_11090 PF02322 Cytochrome bd terminal oxidase subunit II M1S44_11095 PF08173 Membrane bound YbgT-like protein M1S44_11110 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M1S44_11120 PF00448 SRP54-type protein, GTPase domain M1S44_11120 PF02881 SRP54-type protein, helical bundle domain M1S44_11145 PF00571 CBS domain M1S44_11145 PF00478 IMP dehydrogenase / GMP reductase domain M1S44_11150 PF00202 Aminotransferase class-III M1S44_11155 PF00462 Glutaredoxin M1S44_11165 PF03466 LysR substrate binding domain M1S44_11165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_11170 PF00557 Metallopeptidase family M24 M1S44_11175 PF05525 Branched-chain amino acid transport protein M1S44_11200 PF02896 PEP-utilising enzyme, TIM barrel domain M1S44_11200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M1S44_11200 PF00381 PTS HPr component phosphorylation site M1S44_11200 PF05524 PEP-utilising enzyme, N-terminal M1S44_11200 PF00391 PEP-utilising enzyme, mobile domain M1S44_11205 PF00294 pfkB family carbohydrate kinase M1S44_11210 PF02378 Phosphotransferase system, EIIC M1S44_11210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M1S44_11230 PF00563 EAL domain M1S44_11230 PF03707 Bacterial signalling protein N terminal repeat M1S44_11230 PF00990 Diguanylate cyclase, GGDEF domain M1S44_11240 PF07995 Glucose / Sorbosone dehydrogenase M1S44_11245 PF02586 SOS response associated peptidase (SRAP) M1S44_11250 PF00916 Sulfate permease family M1S44_11250 PF01740 STAS domain M1S44_11255 PF05922 Peptidase inhibitor I9 M1S44_11255 PF00082 Subtilase family M1S44_11270 PF00324 Amino acid permease M1S44_11275 PF00266 Aminotransferase class-V M1S44_11280 PF01037 Lrp/AsnC ligand binding domain M1S44_11305 PF13419 Haloacid dehalogenase-like hydrolase M1S44_11310 PF01479 S4 domain M1S44_11315 PF00154 recA bacterial DNA recombination protein M1S44_11320 PF02631 RecX family M1S44_11335 PF00132 Bacterial transferase hexapeptide (six repeats) M1S44_11335 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M1S44_11340 PF07977 FabA-like domain M1S44_11345 PF00132 Bacterial transferase hexapeptide (six repeats) M1S44_11345 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M1S44_11355 PF01103 Surface antigen M1S44_11355 PF07244 Surface antigen variable number repeat M1S44_11360 PF13180 PDZ domain M1S44_11360 PF17820 PDZ domain M1S44_11360 PF02163 Peptidase family M50 M1S44_11365 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M1S44_11365 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M1S44_11365 PF13288 DXP reductoisomerase C-terminal domain M1S44_11375 PF01255 Putative undecaprenyl diphosphate synthase M1S44_11380 PF01765 Ribosome recycling factor M1S44_11385 PF00696 Amino acid kinase family M1S44_11390 PF00919 Uncharacterized protein family UPF0004 M1S44_11390 PF18693 TRAM domain M1S44_11390 PF04055 Radical SAM superfamily M1S44_11395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_11395 PF00512 His Kinase A (phospho-acceptor) domain M1S44_11395 PF00989 PAS fold M1S44_11400 PF02954 Bacterial regulatory protein, Fis family M1S44_11400 PF00072 Response regulator receiver domain M1S44_11400 PF00158 Sigma-54 interaction domain M1S44_11420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1S44_11420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1S44_11430 PF02542 YgbB family M1S44_11440 PF01266 FAD dependent oxidoreductase M1S44_11460 PF00206 Lyase M1S44_11460 PF10415 Fumarase C C-terminus M1S44_11465 PF16363 GDP-mannose 4,6 dehydratase M1S44_11470 PF02635 DsrE/DsrF-like family M1S44_11490 PF00892 EamA-like transporter family M1S44_11495 PF00155 Aminotransferase class I and II M1S44_11495 PF00392 Bacterial regulatory proteins, gntR family M1S44_11500 PF01638 HxlR-like helix-turn-helix M1S44_11505 PF00994 Probable molybdopterin binding domain M1S44_11505 PF03454 MoeA C-terminal region (domain IV) M1S44_11505 PF03453 MoeA N-terminal region (domain I and II) M1S44_11510 PF01967 MoaC family M1S44_11510 PF00994 Probable molybdopterin binding domain M1S44_11515 PF02391 MoaE protein M1S44_11525 PF04055 Radical SAM superfamily M1S44_11525 PF06463 Molybdenum Cofactor Synthesis C M1S44_11530 PF01568 Molydopterin dinucleotide binding domain M1S44_11530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S44_11530 PF00384 Molybdopterin oxidoreductase M1S44_11535 PF12804 MobA-like NTP transferase domain M1S44_11540 PF04324 BFD-like [2Fe-2S] binding domain M1S44_11540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S44_11540 PF00384 Molybdopterin oxidoreductase M1S44_11540 PF01568 Molydopterin dinucleotide binding domain M1S44_11545 PF04324 BFD-like [2Fe-2S] binding domain M1S44_11545 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S44_11545 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S44_11545 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S44_11545 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_11550 PF04324 BFD-like [2Fe-2S] binding domain M1S44_11550 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M1S44_11550 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_11550 PF13806 Rieske-like [2Fe-2S] domain M1S44_11550 PF18267 Rubredoxin NAD+ reductase C-terminal domain M1S44_11550 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M1S44_11560 PF00072 Response regulator receiver domain M1S44_11560 PF00486 Transcriptional regulatory protein, C terminal M1S44_11565 PF00005 ABC transporter M1S44_11575 PF00817 impB/mucB/samB family M1S44_11575 PF13438 Domain of unknown function (DUF4113) M1S44_11575 PF11799 impB/mucB/samB family C-terminal domain M1S44_11580 PF01220 Dehydroquinase class II M1S44_11585 PF00364 Biotin-requiring enzyme M1S44_11590 PF02785 Biotin carboxylase C-terminal domain M1S44_11590 PF00289 Biotin carboxylase, N-terminal domain M1S44_11590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1S44_11600 PF12832 MFS_1 like family M1S44_11670 PF01464 Transglycosylase SLT domain M1S44_11670 PF10145 Phage-related minor tail protein M1S44_11670 PF01551 Peptidase family M23 M1S44_11690 PF03869 Arc-like DNA binding domain M1S44_11875 PF01555 DNA methylase M1S44_11985 PF01645 Conserved region in glutamate synthase M1S44_12000 PF01565 FAD binding domain M1S44_12000 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M1S44_12005 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S44_12015 PF00465 Iron-containing alcohol dehydrogenase M1S44_12020 PF03061 Thioesterase superfamily M1S44_12025 PF05506 Domain of unknown function (DUF756) M1S44_12025 PF04185 Phosphoesterase family M1S44_12030 PF12169 DNA polymerase III subunits gamma and tau domain III M1S44_12030 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M1S44_12030 PF12170 DNA polymerase III tau subunit V interacting with alpha M1S44_12035 PF07690 Major Facilitator Superfamily M1S44_12045 PF00144 Beta-lactamase M1S44_12050 PF01575 MaoC like domain M1S44_12060 PF02803 Thiolase, C-terminal domain M1S44_12060 PF00108 Thiolase, N-terminal domain M1S44_12070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_12070 PF03466 LysR substrate binding domain M1S44_12075 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1S44_12080 PF01810 LysE type translocator M1S44_12085 PF01037 Lrp/AsnC ligand binding domain M1S44_12090 PF03594 Benzoate membrane transport protein M1S44_12095 PF02308 MgtC family M1S44_12100 PF00689 Cation transporting ATPase, C-terminus M1S44_12100 PF00690 Cation transporter/ATPase, N-terminus M1S44_12125 PF00582 Universal stress protein family M1S44_12130 PF00005 ABC transporter M1S44_12130 PF12848 ABC transporter M1S44_12150 PF07715 TonB-dependent Receptor Plug Domain M1S44_12150 PF00593 TonB dependent receptor M1S44_12185 PF00924 Mechanosensitive ion channel M1S44_12190 PF07715 TonB-dependent Receptor Plug Domain M1S44_12190 PF00593 TonB dependent receptor M1S44_12195 PF00440 Bacterial regulatory proteins, tetR family M1S44_12210 PF01037 Lrp/AsnC ligand binding domain M1S44_12215 PF01817 Chorismate mutase type II M1S44_12225 PF00106 short chain dehydrogenase M1S44_12235 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M1S44_12235 PF01433 Peptidase family M1 domain M1S44_12235 PF11940 Domain of unknown function (DUF3458) Ig-like fold M1S44_12250 PF02110 Hydroxyethylthiazole kinase family M1S44_12255 PF06445 GyrI-like small molecule binding domain M1S44_12265 PF14493 Helix-turn-helix domain M1S44_12265 PF05970 PIF1-like helicase M1S44_12270 PF00465 Iron-containing alcohol dehydrogenase M1S44_12285 PF00171 Aldehyde dehydrogenase family M1S44_12290 PF13520 Amino acid permease M1S44_12295 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M1S44_12300 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M1S44_12305 PF00117 Glutamine amidotransferase class-I M1S44_12305 PF00958 GMP synthase C terminal domain M1S44_12305 PF02540 NAD synthase M1S44_12310 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M1S44_12310 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S44_12315 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S44_12320 PF00149 Calcineurin-like phosphoesterase M1S44_12330 PF00881 Nitroreductase family M1S44_12340 PF17209 Hfq protein M1S44_12350 PF01119 DNA mismatch repair protein, C-terminal domain M1S44_12350 PF08676 MutL C terminal dimerisation domain M1S44_12355 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M1S44_12360 PF00849 RNA pseudouridylate synthase M1S44_12360 PF01479 S4 domain M1S44_12375 PF00849 RNA pseudouridylate synthase M1S44_12375 PF01479 S4 domain M1S44_12385 PF04284 Protein of unknown function (DUF441) M1S44_12390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_12390 PF03466 LysR substrate binding domain M1S44_12405 PF07690 Major Facilitator Superfamily M1S44_12410 PF00027 Cyclic nucleotide-binding domain M1S44_12410 PF00520 Ion transport protein M1S44_12420 PF00330 Aconitase family (aconitate hydratase) M1S44_12420 PF06434 Aconitate hydratase 2 N-terminus M1S44_12420 PF11791 Aconitate B N-terminal domain M1S44_12435 PF01103 Surface antigen M1S44_12435 PF07244 Surface antigen variable number repeat M1S44_12435 PF17243 POTRA domain TamA domain 1 M1S44_12440 PF07690 Major Facilitator Superfamily M1S44_12445 PF03232 Ubiquinone biosynthesis protein COQ7 M1S44_12455 PF00120 Glutamine synthetase, catalytic domain M1S44_12460 PF00072 Response regulator receiver domain M1S44_12460 PF00486 Transcriptional regulatory protein, C terminal M1S44_12465 PF13493 Domain of unknown function (DUF4118) M1S44_12465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_12465 PF00512 His Kinase A (phospho-acceptor) domain M1S44_12465 PF02702 Osmosensitive K+ channel His kinase sensor domain M1S44_12470 PF02669 K+-transporting ATPase, c chain M1S44_12480 PF03814 Potassium-transporting ATPase A subunit M1S44_12495 PF03109 ABC1 family M1S44_12500 PF00899 ThiF family M1S44_12505 PF01613 Flavin reductase like domain M1S44_12510 PF00501 AMP-binding enzyme M1S44_12510 PF13193 AMP-binding enzyme C-terminal domain M1S44_12515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_12515 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_12515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_12520 PF00106 short chain dehydrogenase M1S44_12525 PF12833 Helix-turn-helix domain M1S44_12530 PF09084 NMT1/THI5 like M1S44_12535 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_12540 PF17827 PrmC N-terminal domain M1S44_12540 PF13847 Methyltransferase domain M1S44_12545 PF00472 RF-1 domain M1S44_12545 PF03462 PCRF domain M1S44_12555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_12555 PF03466 LysR substrate binding domain M1S44_12570 PF00296 Luciferase-like monooxygenase M1S44_12580 PF13994 PgaD-like protein M1S44_12585 PF00535 Glycosyl transferase family 2 M1S44_12590 PF14883 Hypothetical glycosyl hydrolase family 13 M1S44_12590 PF01522 Polysaccharide deacetylase M1S44_12600 PF03618 Kinase/pyrophosphorylase M1S44_12605 PF00391 PEP-utilising enzyme, mobile domain M1S44_12605 PF02896 PEP-utilising enzyme, TIM barrel domain M1S44_12605 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M1S44_12615 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M1S44_12615 PF06481 COX Aromatic Rich Motif M1S44_12620 PF00115 Cytochrome C and Quinol oxidase polypeptide I M1S44_12625 PF00510 Cytochrome c oxidase subunit III M1S44_12630 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M1S44_12635 PF01040 UbiA prenyltransferase family M1S44_12640 PF01250 Ribosomal protein S6 M1S44_12645 PF01084 Ribosomal protein S18 M1S44_12650 PF03948 Ribosomal protein L9, C-terminal domain M1S44_12650 PF01281 Ribosomal protein L9, N-terminal domain M1S44_12655 PF00772 DnaB-like helicase N terminal domain M1S44_12655 PF03796 DnaB-like helicase C terminal domain M1S44_12660 PF00842 Alanine racemase, C-terminal domain M1S44_12660 PF01168 Alanine racemase, N-terminal domain M1S44_12670 PF08379 Bacterial transglutaminase-like N-terminal region M1S44_12670 PF01841 Transglutaminase-like superfamily M1S44_12680 PF14403 Circularly permuted ATP-grasp type 2 M1S44_12690 PF13932 GidA associated domain M1S44_12690 PF01134 Glucose inhibited division protein A M1S44_12710 PF02954 Bacterial regulatory protein, Fis family M1S44_12715 PF01808 AICARFT/IMPCHase bienzyme M1S44_12715 PF02142 MGS-like domain M1S44_12720 PF02844 Phosphoribosylglycinamide synthetase, N domain M1S44_12720 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M1S44_12720 PF02843 Phosphoribosylglycinamide synthetase, C domain M1S44_12725 PF03180 NLPA lipoprotein M1S44_12730 PF00005 ABC transporter M1S44_12730 PF09383 NIL domain M1S44_12735 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_12740 PF00753 Metallo-beta-lactamase superfamily M1S44_12740 PF16123 Hydroxyacylglutathione hydrolase C-terminus M1S44_12750 PF00375 Sodium:dicarboxylate symporter family M1S44_12765 PF13610 DDE domain M1S44_12770 PF13817 IS66 C-terminal element M1S44_12770 PF03050 Transposase IS66 family M1S44_12770 PF13007 Transposase C of IS166 homeodomain M1S44_12770 PF13005 zinc-finger binding domain of transposase IS66 M1S44_12780 PF01636 Phosphotransferase enzyme family M1S44_12785 PF12848 ABC transporter M1S44_12785 PF00005 ABC transporter M1S44_12800 PF07091 Ribosomal RNA methyltransferase (FmrO) M1S44_12815 PF00809 Pterin binding enzyme M1S44_12820 PF00893 Small Multidrug Resistance protein M1S44_12830 PF00132 Bacterial transferase hexapeptide (six repeats) M1S44_12845 PF13610 DDE domain M1S44_12850 PF01636 Phosphotransferase enzyme family M1S44_12860 PF13610 DDE domain M1S44_12870 PF07995 Glucose / Sorbosone dehydrogenase M1S44_12875 PF00892 EamA-like transporter family M1S44_12880 PF01177 Asp/Glu/Hydantoin racemase M1S44_12890 PF02470 MlaD protein M1S44_12895 PF04403 Paraquat-inducible protein A M1S44_12905 PF06826 Predicted Permease Membrane Region M1S44_12905 PF02080 TrkA-C domain M1S44_12910 PF00155 Aminotransferase class I and II M1S44_12935 PF08946 Osmosensory transporter coiled coil M1S44_12935 PF00083 Sugar (and other) transporter M1S44_12985 PF07729 FCD domain M1S44_12985 PF00392 Bacterial regulatory proteins, gntR family M1S44_12995 PF03616 Sodium/glutamate symporter M1S44_13000 PF00561 alpha/beta hydrolase fold M1S44_13015 PF13610 DDE domain M1S44_13025 PF04958 Arginine N-succinyltransferase beta subunit M1S44_13030 PF00202 Aminotransferase class-III M1S44_13040 PF00171 Aldehyde dehydrogenase family M1S44_13050 PF00392 Bacterial regulatory proteins, gntR family M1S44_13050 PF07729 FCD domain M1S44_13060 PF00324 Amino acid permease M1S44_13065 PF01266 FAD dependent oxidoreductase M1S44_13070 PF00324 Amino acid permease M1S44_13110 PF05593 RHS Repeat M1S44_13110 PF03527 RHS protein M1S44_13115 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M1S44_13115 PF04717 Type VI secretion system, phage-baseplate injector M1S44_13115 PF13296 Putative type VI secretion system Rhs element Vgr M1S44_13135 PF03180 NLPA lipoprotein M1S44_13140 PF05987 Bacterial protein of unknown function (DUF898) M1S44_13155 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_13155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S44_13160 PF00764 Arginosuccinate synthase M1S44_13165 PF00360 Phytochrome region M1S44_13165 PF01590 GAF domain M1S44_13165 PF00563 EAL domain M1S44_13165 PF00990 Diguanylate cyclase, GGDEF domain M1S44_13170 PF01979 Amidohydrolase family M1S44_13175 PF00929 Exonuclease M1S44_13185 PF00593 TonB dependent receptor M1S44_13185 PF07715 TonB-dependent Receptor Plug Domain M1S44_13190 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_13190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1S44_13195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1S44_13195 PF00005 ABC transporter M1S44_13200 PF12911 N-terminal TM domain of oligopeptide transport permease C M1S44_13200 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_13205 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_13210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1S44_13215 PF01464 Transglycosylase SLT domain M1S44_13215 PF01476 LysM domain M1S44_13215 PF01464 Transglycosylase SLT domain M1S44_13215 PF01476 LysM domain M1S44_13220 PF00929 Exonuclease M1S44_13230 PF00293 NUDIX domain M1S44_13230 PF09297 NADH pyrophosphatase zinc ribbon domain M1S44_13240 PF04972 BON domain M1S44_13245 PF02021 Uncharacterised protein family UPF0102 M1S44_13250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1S44_13260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_13260 PF03466 LysR substrate binding domain M1S44_13265 PF01810 LysE type translocator M1S44_13275 PF13411 MerR HTH family regulatory protein M1S44_13285 PF01494 FAD binding domain M1S44_13290 PF01494 FAD binding domain M1S44_13295 PF00557 Metallopeptidase family M24 M1S44_13295 PF05195 Aminopeptidase P, N-terminal domain M1S44_13380 PF01551 Peptidase family M23 M1S44_13380 PF10145 Phage-related minor tail protein M1S44_13380 PF01464 Transglycosylase SLT domain M1S44_13440 PF04860 Phage portal protein M1S44_13530 PF08019 Phosphoethanolamine transferase EptA/EptB M1S44_13530 PF00884 Sulfatase M1S44_13575 PF01476 LysM domain M1S44_13575 PF08525 Opacity-associated protein A N-terminal motif M1S44_13575 PF01551 Peptidase family M23 M1S44_13900 PF01812 5-formyltetrahydrofolate cyclo-ligase family M1S44_13905 PF00691 OmpA family M1S44_13905 PF04355 SmpA / OmlA family M1S44_13910 PF13018 Extended Signal Peptide of Type V secretion system M1S44_13910 PF03895 YadA-like membrane anchor domain M1S44_13910 PF05658 Head domain of trimeric autotransporter adhesin M1S44_13910 PF05662 Coiled stalk of trimeric autotransporter adhesin M1S44_13915 PF02190 ATP-dependent protease La (LON) substrate-binding domain M1S44_13915 PF00004 ATPase family associated with various cellular activities (AAA) M1S44_13915 PF05362 Lon protease (S16) C-terminal proteolytic domain M1S44_13920 PF02590 Predicted SPOUT methyltransferase M1S44_13925 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M1S44_13935 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1S44_13935 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1S44_13940 PF04060 Putative Fe-S cluster M1S44_13945 PF00730 HhH-GPD superfamily base excision DNA repair protein M1S44_13945 PF10576 Iron-sulfur binding domain of endonuclease III M1S44_13945 PF00633 Helix-hairpin-helix motif M1S44_13955 PF05191 Adenylate kinase, active site lid M1S44_13970 PF00905 Penicillin binding protein transpeptidase domain M1S44_13970 PF03717 Penicillin-binding Protein dimerisation domain M1S44_13985 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S44_13990 PF01730 UreF M1S44_13995 PF05194 UreE urease accessory protein, C-terminal domain M1S44_13995 PF02814 UreE urease accessory protein, N-terminal domain M1S44_14000 PF00449 Urease alpha-subunit, N-terminal domain M1S44_14000 PF01979 Amidohydrolase family M1S44_14005 PF00699 Urease beta subunit M1S44_14010 PF00547 Urease, gamma subunit M1S44_14015 PF01774 UreD urease accessory protein M1S44_14030 PF00463 Isocitrate lyase family M1S44_14035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_14035 PF03466 LysR substrate binding domain M1S44_14040 PF00571 CBS domain M1S44_14040 PF03471 Transporter associated domain M1S44_14040 PF01595 Cyclin M transmembrane N-terminal domain M1S44_14045 PF03600 Citrate transporter M1S44_14060 PF00009 Elongation factor Tu GTP binding domain M1S44_14065 PF01507 Phosphoadenosine phosphosulfate reductase family M1S44_14075 PF14052 Capsule assembly protein Wzi M1S44_14080 PF00152 tRNA synthetases class II (D, K and N) M1S44_14080 PF01336 OB-fold nucleic acid binding domain M1S44_14095 PF00301 Rubredoxin M1S44_14100 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_14100 PF18113 Rubredoxin binding C-terminal domain M1S44_14105 PF00561 alpha/beta hydrolase fold M1S44_14110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_14110 PF03466 LysR substrate binding domain M1S44_14120 PF13090 Polyphosphate kinase C-terminal domain 2 M1S44_14120 PF17941 Polyphosphate kinase C-terminal domain 1 M1S44_14120 PF13089 Polyphosphate kinase N-terminal domain M1S44_14120 PF02503 Polyphosphate kinase middle domain M1S44_14125 PF00912 Transglycosylase M1S44_14130 PF01694 Rhomboid family M1S44_14140 PF00005 ABC transporter M1S44_14145 PF13472 GDSL-like Lipase/Acylhydrolase family M1S44_14150 PF00484 Carbonic anhydrase M1S44_14155 PF00561 alpha/beta hydrolase fold M1S44_14165 PF07715 TonB-dependent Receptor Plug Domain M1S44_14165 PF00593 TonB dependent receptor M1S44_14170 PF01521 Iron-sulphur cluster biosynthesis M1S44_14170 PF01106 NifU-like domain M1S44_14180 PF00884 Sulfatase M1S44_14185 PF03781 Sulfatase-modifying factor enzyme 1 M1S44_14200 PF00291 Pyridoxal-phosphate dependent enzyme M1S44_14205 PF01384 Phosphate transporter family M1S44_14210 PF02310 B12 binding domain M1S44_14210 PF02607 B12 binding domain M1S44_14210 PF02965 Vitamin B12 dependent methionine synthase, activation domain M1S44_14210 PF00809 Pterin binding enzyme M1S44_14210 PF02574 Homocysteine S-methyltransferase M1S44_14215 PF02779 Transketolase, pyrimidine binding domain M1S44_14215 PF02780 Transketolase, C-terminal domain M1S44_14220 PF00456 Transketolase, thiamine diphosphate binding domain M1S44_14225 PF07690 Major Facilitator Superfamily M1S44_14235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_14235 PF03466 LysR substrate binding domain M1S44_14245 PF01263 Aldose 1-epimerase M1S44_14250 PF07690 Major Facilitator Superfamily M1S44_14255 PF02311 AraC-like ligand binding domain M1S44_14255 PF12833 Helix-turn-helix domain M1S44_14260 PF04960 Glutaminase M1S44_14265 PF01327 Polypeptide deformylase M1S44_14270 PF07690 Major Facilitator Superfamily M1S44_14280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S44_14280 PF00205 Thiamine pyrophosphate enzyme, central domain M1S44_14280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S44_14285 PF00171 Aldehyde dehydrogenase family M1S44_14290 PF01958 Domain of unknown function DUF108 M1S44_14290 PF03447 Homoserine dehydrogenase, NAD binding domain M1S44_14300 PF12697 Alpha/beta hydrolase family M1S44_14310 PF07690 Major Facilitator Superfamily M1S44_14315 PF14759 Reductase C-terminal M1S44_14315 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_14320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M1S44_14330 PF00355 Rieske [2Fe-2S] domain M1S44_14340 PF00355 Rieske [2Fe-2S] domain M1S44_14345 PF09339 IclR helix-turn-helix domain M1S44_14345 PF01614 Bacterial transcriptional regulator M1S44_14360 PF00378 Enoyl-CoA hydratase/isomerase M1S44_14370 PF00535 Glycosyl transferase family 2 M1S44_14375 PF14883 Hypothetical glycosyl hydrolase family 13 M1S44_14375 PF01522 Polysaccharide deacetylase M1S44_14380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S44_14385 PF07152 YaeQ protein M1S44_14390 PF00375 Sodium:dicarboxylate symporter family M1S44_14395 PF07683 Cobalamin synthesis protein cobW C-terminal domain M1S44_14395 PF02492 CobW/HypB/UreG, nucleotide-binding domain M1S44_14405 PF03061 Thioesterase superfamily M1S44_14415 PF02028 BCCT, betaine/carnitine/choline family transporter M1S44_14420 PF02028 BCCT, betaine/carnitine/choline family transporter M1S44_14425 PF13977 BetI-type transcriptional repressor, C-terminal M1S44_14425 PF00440 Bacterial regulatory proteins, tetR family M1S44_14430 PF00171 Aldehyde dehydrogenase family M1S44_14435 PF05199 GMC oxidoreductase M1S44_14435 PF00732 GMC oxidoreductase M1S44_14440 PF06039 Malate:quinone oxidoreductase (Mqo) M1S44_14450 PF02574 Homocysteine S-methyltransferase M1S44_14455 PF13520 Amino acid permease M1S44_14480 PF01126 Heme oxygenase M1S44_14490 PF04575 Protein of unknown function (DUF560) M1S44_14500 PF07715 TonB-dependent Receptor Plug Domain M1S44_14500 PF00593 TonB dependent receptor M1S44_14510 PF04542 Sigma-70 region 2 M1S44_14510 PF08281 Sigma-70, region 4 M1S44_14520 PF00701 Dihydrodipicolinate synthetase family M1S44_14525 PF00083 Sugar (and other) transporter M1S44_14545 PF01026 TatD related DNase M1S44_14560 PF07693 KAP family P-loop domain M1S44_14580 PF00436 Single-strand binding protein family M1S44_14635 PF13356 Arm DNA-binding domain M1S44_14635 PF00589 Phage integrase family M1S44_14745 PF00712 DNA polymerase III beta subunit, N-terminal domain M1S44_14745 PF02767 DNA polymerase III beta subunit, central domain M1S44_14745 PF02768 DNA polymerase III beta subunit, C-terminal domain M1S44_14785 PF05016 ParE toxin of type II toxin-antitoxin system, parDE M1S44_14980 PF01695 IstB-like ATP binding protein M1S44_14990 PF00145 C-5 cytosine-specific DNA methylase M1S44_15070 PF00929 Exonuclease M1S44_15145 PF07690 Major Facilitator Superfamily M1S44_15150 PF13533 Biotin-lipoyl like M1S44_15155 PF03061 Thioesterase superfamily M1S44_15160 PF00490 Delta-aminolevulinic acid dehydratase M1S44_15165 PF01266 FAD dependent oxidoreductase M1S44_15170 PF08338 Domain of unknown function (DUF1731) M1S44_15170 PF01370 NAD dependent epimerase/dehydratase family M1S44_15190 PF00149 Calcineurin-like phosphoesterase M1S44_15190 PF12320 Type 5 capsule protein repressor C-terminal domain M1S44_15200 PF01168 Alanine racemase, N-terminal domain M1S44_15205 PF00437 Type II/IV secretion system protein M1S44_15210 PF00437 Type II/IV secretion system protein M1S44_15215 PF01475 Ferric uptake regulator family M1S44_15220 PF04355 SmpA / OmlA family M1S44_15225 PF03658 RnfH family Ubiquitin M1S44_15235 PF01814 Hemerythrin HHE cation binding domain M1S44_15240 PF13230 Glutamine amidotransferases class-II M1S44_15250 PF00696 Amino acid kinase family M1S44_15255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S44_15255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S44_15255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S44_15255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S44_15260 PF00692 dUTPase M1S44_15265 PF00580 UvrD/REP helicase N-terminal domain M1S44_15265 PF13361 UvrD-like helicase C-terminal domain M1S44_15270 PF13488 Glycine zipper M1S44_15270 PF00691 OmpA family M1S44_15275 PF01553 Acyltransferase M1S44_15285 PF03775 Septum formation inhibitor MinC, C-terminal domain M1S44_15290 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M1S44_15295 PF03776 Septum formation topological specificity factor MinE M1S44_15315 PF01810 LysE type translocator M1S44_15320 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M1S44_15320 PF17854 FtsK alpha domain M1S44_15320 PF01580 FtsK/SpoIIIE family M1S44_15320 PF09397 Ftsk gamma domain M1S44_15325 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1S44_15335 PF04376 Arginine-tRNA-protein transferase, N terminus M1S44_15335 PF04377 Arginine-tRNA-protein transferase, C terminus M1S44_15340 PF00583 Acetyltransferase (GNAT) family M1S44_15360 PF03144 Elongation factor Tu domain 2 M1S44_15360 PF03764 Elongation factor G, domain IV M1S44_15360 PF14492 Elongation Factor G, domain II M1S44_15360 PF00679 Elongation factor G C-terminus M1S44_15360 PF00009 Elongation factor Tu GTP binding domain M1S44_15365 PF00177 Ribosomal protein S7p/S5e M1S44_15370 PF00164 Ribosomal protein S12/S23 M1S44_15380 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S44_15380 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S44_15385 PF03653 Uncharacterised protein family (UPF0093) M1S44_15390 PF05726 Pirin C-terminal cupin domain M1S44_15390 PF02678 Pirin M1S44_15400 PF00795 Carbon-nitrogen hydrolase M1S44_15400 PF02540 NAD synthase M1S44_15415 PF00970 Oxidoreductase FAD-binding domain M1S44_15415 PF00111 2Fe-2S iron-sulfur cluster binding domain M1S44_15415 PF00175 Oxidoreductase NAD-binding domain M1S44_15420 PF00171 Aldehyde dehydrogenase family M1S44_15425 PF00355 Rieske [2Fe-2S] domain M1S44_15425 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M1S44_15430 PF07859 alpha/beta hydrolase fold M1S44_15435 PF02028 BCCT, betaine/carnitine/choline family transporter M1S44_15440 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S44_15445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_15445 PF03466 LysR substrate binding domain M1S44_15465 PF00037 4Fe-4S binding domain M1S44_15470 PF01467 Cytidylyltransferase-like M1S44_15475 PF01668 SmpB protein M1S44_15480 PF03358 NADPH-dependent FMN reductase M1S44_15485 PF02578 Multi-copper polyphenol oxidoreductase laccase M1S44_15490 PF00849 RNA pseudouridylate synthase M1S44_15490 PF01479 S4 domain M1S44_15495 PF13525 Outer membrane lipoprotein M1S44_15500 PF10410 DnaB-helicase binding domain of primase M1S44_15500 PF08278 DNA primase DnaG DnaB-binding M1S44_15500 PF08275 DNA primase catalytic core, N-terminal domain M1S44_15500 PF01807 CHC2 zinc finger M1S44_15505 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M1S44_15505 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M1S44_15505 PF01488 Shikimate / quinate 5-dehydrogenase M1S44_15515 PF03550 Outer membrane lipoprotein LolB M1S44_15520 PF08544 GHMP kinases C terminal M1S44_15520 PF00288 GHMP kinases N terminal domain M1S44_15545 PF14572 Phosphoribosyl synthetase-associated domain M1S44_15545 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1S44_15550 PF01386 Ribosomal L25p family M1S44_15555 PF01195 Peptidyl-tRNA hydrolase M1S44_15560 PF02261 Aspartate decarboxylase M1S44_15575 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M1S44_15585 PF02581 Thiamine monophosphate synthase M1S44_15585 PF03070 TENA/THI-4/PQQC family M1S44_15585 PF08543 Phosphomethylpyrimidine kinase M1S44_15590 PF01476 LysM domain M1S44_15590 PF04972 BON domain M1S44_15595 PF00550 Phosphopantetheine attachment site M1S44_15605 PF00698 Acyl transferase domain M1S44_15610 PF01783 Ribosomal L32p protein family M1S44_15615 PF02620 Large ribosomal RNA subunit accumulation protein YceD M1S44_15620 PF04315 Elongation factor P hydroxylase M1S44_15625 PF01300 Telomere recombination M1S44_15630 PF02616 Segregation and condensation protein ScpA M1S44_15635 PF04079 Segregation and condensation complex subunit ScpB M1S44_15640 PF01479 S4 domain M1S44_15640 PF00849 RNA pseudouridylate synthase M1S44_15655 PF00155 Aminotransferase class I and II M1S44_15660 PF04055 Radical SAM superfamily M1S44_15660 PF00202 Aminotransferase class-III M1S44_15660 PF06968 Biotin and Thiamin Synthesis associated domain M1S44_15665 PF12697 Alpha/beta hydrolase family M1S44_15665 PF08241 Methyltransferase domain M1S44_15670 PF02358 Trehalose-phosphatase M1S44_15675 PF00982 Glycosyltransferase family 20 M1S44_15680 PF07690 Major Facilitator Superfamily M1S44_15685 PF00210 Ferritin-like domain M1S44_15690 PF00533 BRCA1 C Terminus (BRCT) domain M1S44_15690 PF01653 NAD-dependent DNA ligase adenylation domain M1S44_15690 PF03120 NAD-dependent DNA ligase OB-fold domain M1S44_15690 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M1S44_15690 PF12826 Helix-hairpin-helix motif M1S44_15700 PF06470 SMC proteins Flexible Hinge Domain M1S44_15700 PF02463 RecF/RecN/SMC N terminal domain M1S44_15710 PF01925 Sulfite exporter TauE/SafE M1S44_15720 PF03309 Type III pantothenate kinase M1S44_15725 PF02881 SRP54-type protein, helical bundle domain M1S44_15725 PF00448 SRP54-type protein, GTPase domain M1S44_15725 PF02978 Signal peptide binding domain M1S44_15735 PF01207 Dihydrouridine synthase (Dus) M1S44_15775 PF00692 dUTPase M1S44_15790 PF01048 Phosphorylase superfamily M1S44_15795 PF10609 NUBPL iron-transfer P-loop NTPase M1S44_15805 PF09334 tRNA synthetases class I (M) M1S44_15805 PF01588 Putative tRNA binding domain M1S44_15830 PF13533 Biotin-lipoyl like M1S44_15835 PF00291 Pyridoxal-phosphate dependent enzyme M1S44_15850 PF05552 Conserved TM helix M1S44_15865 PF00970 Oxidoreductase FAD-binding domain M1S44_15865 PF00175 Oxidoreductase NAD-binding domain M1S44_15870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_15870 PF03466 LysR substrate binding domain M1S44_15875 PF00313 'Cold-shock' DNA-binding domain M1S44_15885 PF00361 Proton-conducting membrane transporter M1S44_15890 PF00361 Proton-conducting membrane transporter M1S44_15895 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S44_15895 PF00361 Proton-conducting membrane transporter M1S44_15900 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S44_15905 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M1S44_15910 PF12838 4Fe-4S dicluster domain M1S44_15915 PF00146 NADH dehydrogenase M1S44_15920 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M1S44_15920 PF00384 Molybdopterin oxidoreductase M1S44_15920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1S44_15925 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M1S44_15925 PF10531 SLBB domain M1S44_15925 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M1S44_15935 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M1S44_15935 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M1S44_15940 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M1S44_15945 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M1S44_15950 PF00990 Diguanylate cyclase, GGDEF domain M1S44_15950 PF17151 Periplasmic sensor domain M1S44_15960 PF00512 His Kinase A (phospho-acceptor) domain M1S44_15960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_15960 PF00672 HAMP domain M1S44_15965 PF00072 Response regulator receiver domain M1S44_15965 PF00486 Transcriptional regulatory protein, C terminal M1S44_15975 PF03477 ATP cone domain M1S44_15975 PF02867 Ribonucleotide reductase, barrel domain M1S44_15975 PF00317 Ribonucleotide reductase, all-alpha domain M1S44_15985 PF00268 Ribonucleotide reductase, small chain M1S44_15995 PF00672 HAMP domain M1S44_15995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_15995 PF00512 His Kinase A (phospho-acceptor) domain M1S44_15995 PF13755 Sensor N-terminal transmembrane domain M1S44_15995 PF13756 Stimulus-sensing domain M1S44_16065 PF01011 PQQ enzyme repeat M1S44_16065 PF13360 PQQ-like domain M1S44_16090 PF02567 Phenazine biosynthesis-like protein M1S44_16115 PF01613 Flavin reductase like domain M1S44_16120 PF01717 Cobalamin-independent synthase, Catalytic domain M1S44_16120 PF08267 Cobalamin-independent synthase, N-terminal domain M1S44_16130 PF03466 LysR substrate binding domain M1S44_16130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_16135 PF01810 LysE type translocator M1S44_16145 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M1S44_16145 PF12833 Helix-turn-helix domain M1S44_16150 PF07687 Peptidase dimerisation domain M1S44_16150 PF01546 Peptidase family M20/M25/M40 M1S44_16160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_16160 PF03466 LysR substrate binding domain M1S44_16165 PF07690 Major Facilitator Superfamily M1S44_16175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_16175 PF03466 LysR substrate binding domain M1S44_16180 PF00890 FAD binding domain M1S44_16180 PF14537 Cytochrome c3 M1S44_16190 PF02515 CoA-transferase family III M1S44_16195 PF07690 Major Facilitator Superfamily M1S44_16200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_16200 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_16200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_16205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_16205 PF03466 LysR substrate binding domain M1S44_16210 PF00107 Zinc-binding dehydrogenase M1S44_16210 PF08240 Alcohol dehydrogenase GroES-like domain M1S44_16215 PF00962 Adenosine/AMP deaminase M1S44_16240 PF02445 Quinolinate synthetase A protein M1S44_16245 PF01960 ArgJ family M1S44_16250 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S44_16250 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S44_16255 PF00893 Small Multidrug Resistance protein M1S44_16265 PF05275 Copper resistance protein B precursor (CopB) M1S44_16270 PF07732 Multicopper oxidase M1S44_16270 PF07731 Multicopper oxidase M1S44_16270 PF00394 Multicopper oxidase M1S44_16285 PF00834 Ribulose-phosphate 3 epimerase family M1S44_16295 PF00756 Putative esterase M1S44_16305 PF04445 Putative SAM-dependent methyltransferase M1S44_16310 PF00814 Glycoprotease family M1S44_16315 PF00132 Bacterial transferase hexapeptide (six repeats) M1S44_16320 PF00293 NUDIX domain M1S44_16360 PF04715 Anthranilate synthase component I, N terminal region M1S44_16360 PF00425 chorismate binding enzyme M1S44_16365 PF00155 Aminotransferase class I and II M1S44_16370 PF00815 Histidinol dehydrogenase M1S44_16375 PF01634 ATP phosphoribosyltransferase M1S44_16380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1S44_16385 PF01722 BolA-like protein M1S44_16390 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M1S44_16395 PF04552 Sigma-54, DNA binding domain M1S44_16395 PF04963 Sigma-54 factor, core binding domain M1S44_16395 PF00309 Sigma-54 factor, Activator interacting domain (AID) M1S44_16440 PF00795 Carbon-nitrogen hydrolase M1S44_16450 PF01047 MarR family M1S44_16455 PF02566 OsmC-like protein M1S44_16460 PF00437 Type II/IV secretion system protein M1S44_16480 PF01612 3'-5' exonuclease M1S44_16480 PF01367 5'-3' exonuclease, C-terminal SAM fold M1S44_16480 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1S44_16480 PF00476 DNA polymerase family A M1S44_16485 PF02325 YGGT family M1S44_16490 PF03807 NADP oxidoreductase coenzyme F420-dependent M1S44_16490 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1S44_16495 PF01171 PP-loop family M1S44_16495 PF11734 TilS substrate C-terminal domain M1S44_16495 PF09179 TilS substrate binding domain M1S44_16500 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M1S44_16505 PF02541 Ppx/GppA phosphatase family M1S44_16510 PF00085 Thioredoxin M1S44_16515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S44_16515 PF07498 Rho termination factor, N-terminal domain M1S44_16515 PF07497 Rho termination factor, RNA-binding domain M1S44_16530 PF00216 Bacterial DNA-binding protein M1S44_16535 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M1S44_16535 PF03483 B3/4 domain M1S44_16535 PF03484 tRNA synthetase B5 domain M1S44_16535 PF03147 Ferredoxin-fold anticodon binding domain M1S44_16535 PF01588 Putative tRNA binding domain M1S44_16540 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M1S44_16540 PF01409 tRNA synthetases class II core domain (F) M1S44_16560 PF00453 Ribosomal protein L20 M1S44_16565 PF01632 Ribosomal protein L35 M1S44_16575 PF07690 Major Facilitator Superfamily M1S44_16580 PF09335 SNARE associated Golgi protein M1S44_16585 PF00043 Glutathione S-transferase, C-terminal domain M1S44_16585 PF02798 Glutathione S-transferase, N-terminal domain M1S44_16590 PF00707 Translation initiation factor IF-3, C-terminal domain M1S44_16590 PF05198 Translation initiation factor IF-3, N-terminal domain M1S44_16595 PF02824 TGS domain M1S44_16595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1S44_16595 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1S44_16595 PF03129 Anticodon binding domain M1S44_16605 PF04751 Protein of unknown function (DUF615) M1S44_16610 PF00381 PTS HPr component phosphorylation site M1S44_16615 PF03668 P-loop ATPase protein family M1S44_16620 PF02569 Pantoate-beta-alanine ligase M1S44_16625 PF02548 Ketopantoate hydroxymethyltransferase M1S44_16630 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M1S44_16635 PF12627 Probable RNA and SrmB- binding site of polymerase A M1S44_16635 PF12626 Polymerase A arginine-rich C-terminus M1S44_16635 PF01743 Poly A polymerase head domain M1S44_16645 PF03819 MazG nucleotide pyrophosphohydrolase domain M1S44_16655 PF13291 ACT domain M1S44_16655 PF04607 Region found in RelA / SpoT proteins M1S44_16655 PF02824 TGS domain M1S44_16660 PF05958 tRNA (Uracil-5-)-methyltransferase M1S44_16670 PF00291 Pyridoxal-phosphate dependent enzyme M1S44_16675 PF01627 Hpt domain M1S44_16675 PF00672 HAMP domain M1S44_16675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_16675 PF00512 His Kinase A (phospho-acceptor) domain M1S44_16675 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M1S44_16675 PF00072 Response regulator receiver domain M1S44_16680 PF00378 Enoyl-CoA hydratase/isomerase M1S44_16685 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S44_16685 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S44_16690 PF01261 Xylose isomerase-like TIM barrel M1S44_16700 PF00106 short chain dehydrogenase M1S44_16705 PF02233 NAD(P) transhydrogenase beta subunit M1S44_16710 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M1S44_16715 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M1S44_16715 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M1S44_16720 PF00892 EamA-like transporter family M1S44_16730 PF07690 Major Facilitator Superfamily M1S44_16735 PF01207 Dihydrouridine synthase (Dus) M1S44_16745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_16745 PF03466 LysR substrate binding domain M1S44_16755 PF00899 ThiF family M1S44_16765 PF00330 Aconitase family (aconitate hydratase) M1S44_16765 PF00694 Aconitase C-terminal domain M1S44_16770 PF01026 TatD related DNase M1S44_16785 PF00009 Elongation factor Tu GTP binding domain M1S44_16785 PF03144 Elongation factor Tu domain 2 M1S44_16785 PF16658 Class II release factor RF3, C-terminal domain M1S44_16805 PF00990 Diguanylate cyclase, GGDEF domain M1S44_16805 PF03707 Bacterial signalling protein N terminal repeat M1S44_16805 PF00563 EAL domain M1S44_16810 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M1S44_16810 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M1S44_16815 PF10369 Small subunit of acetolactate synthase M1S44_16820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1S44_16820 PF00205 Thiamine pyrophosphate enzyme, central domain M1S44_16820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1S44_16830 PF00133 tRNA synthetases class I (I, L, M and V) M1S44_16830 PF13603 Leucyl-tRNA synthetase, Domain 2 M1S44_16830 PF09334 tRNA synthetases class I (M) M1S44_16830 PF08264 Anticodon-binding domain of tRNA M1S44_16845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M1S44_16850 PF00005 ABC transporter M1S44_16850 PF02687 FtsX-like permease family M1S44_16850 PF12704 MacB-like periplasmic core domain M1S44_16855 PF02321 Outer membrane efflux protein M1S44_16870 PF00929 Exonuclease M1S44_16875 PF03193 RsgA GTPase M1S44_16885 PF00462 Glutaredoxin M1S44_16890 PF02556 Preprotein translocase subunit SecB M1S44_16905 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S44_16905 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S44_16920 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S44_16920 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S44_16930 PF04820 Tryptophan halogenase M1S44_16950 PF00221 Aromatic amino acid lyase M1S44_16965 PF00501 AMP-binding enzyme M1S44_16965 PF13193 AMP-binding enzyme C-terminal domain M1S44_16975 PF00550 Phosphopantetheine attachment site M1S44_16980 PF00550 Phosphopantetheine attachment site M1S44_16995 PF01926 50S ribosome-binding GTPase M1S44_16995 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M1S44_17000 PF13360 PQQ-like domain M1S44_17010 PF03129 Anticodon binding domain M1S44_17010 PF13393 Histidyl-tRNA synthetase M1S44_17015 PF04551 GcpE protein M1S44_17020 PF13464 Domain of unknown function (DUF4115) M1S44_17030 PF04055 Radical SAM superfamily M1S44_17035 PF00334 Nucleoside diphosphate kinase M1S44_17040 PF04384 Iron-sulphur cluster assembly M1S44_17045 PF01569 PAP2 superfamily M1S44_17050 PF13439 Glycosyltransferase Family 4 M1S44_17050 PF00534 Glycosyl transferases group 1 M1S44_17055 PF11818 C-terminal domain of tail specific protease (DUF3340) M1S44_17055 PF03572 Peptidase family S41 M1S44_17055 PF17804 Tail specific protease N-terminal domain M1S44_17055 PF00595 PDZ domain M1S44_17060 PF00933 Glycosyl hydrolase family 3 N terminal domain M1S44_17070 PF00561 alpha/beta hydrolase fold M1S44_17075 PF00171 Aldehyde dehydrogenase family M1S44_17080 PF00171 Aldehyde dehydrogenase family M1S44_17085 PF01202 Shikimate kinase M1S44_17090 PF02447 GntP family permease M1S44_17095 PF01081 KDPG and KHG aldolase M1S44_17100 PF00920 Dehydratase family M1S44_17105 PF00871 Acetokinase family M1S44_17110 PF07085 DRTGG domain M1S44_17110 PF01515 Phosphate acetyl/butaryl transferase M1S44_17115 PF05683 Fumarase C-terminus M1S44_17115 PF05681 Fumarate hydratase (Fumerase) M1S44_17130 PF10431 C-terminal, D2-small domain, of ClpB protein M1S44_17130 PF06689 ClpX C4-type zinc finger M1S44_17130 PF07724 AAA domain (Cdc48 subfamily) M1S44_17135 PF00574 Clp protease M1S44_17140 PF05698 Bacterial trigger factor protein (TF) C-terminus M1S44_17140 PF05697 Bacterial trigger factor protein (TF) M1S44_17140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S44_17145 PF07715 TonB-dependent Receptor Plug Domain M1S44_17145 PF00593 TonB dependent receptor M1S44_17150 PF13640 2OG-Fe(II) oxygenase superfamily M1S44_17150 PF18331 PKHD-type hydroxylase C-terminal domain M1S44_17155 PF08502 LeuA allosteric (dimerisation) domain M1S44_17155 PF00682 HMGL-like M1S44_17160 PF00561 alpha/beta hydrolase fold M1S44_17165 PF00561 alpha/beta hydrolase fold M1S44_17165 PF07021 Methionine biosynthesis protein MetW M1S44_17175 PF01725 Ham1 family M1S44_17185 PF02416 mttA/Hcf106 family M1S44_17190 PF02416 mttA/Hcf106 family M1S44_17195 PF00902 Sec-independent protein translocase protein (TatC) M1S44_17215 PF01790 Prolipoprotein diacylglyceryl transferase M1S44_17230 PF00303 Thymidylate synthase M1S44_17235 PF00186 Dihydrofolate reductase M1S44_17245 PF01625 Peptide methionine sulfoxide reductase M1S44_17255 PF01618 MotA/TolQ/ExbB proton channel family M1S44_17265 PF01842 ACT domain M1S44_17265 PF00551 Formyl transferase M1S44_17275 PF00171 Aldehyde dehydrogenase family M1S44_17280 PF00830 Ribosomal L28 family M1S44_17285 PF00471 Ribosomal protein L33 M1S44_17290 PF00999 Sodium/hydrogen exchanger family M1S44_17290 PF02254 TrkA-N domain M1S44_17310 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) M1S44_17315 PF00580 UvrD/REP helicase N-terminal domain M1S44_17315 PF13361 UvrD-like helicase C-terminal domain M1S44_17330 PF08272 Topoisomerase I zinc-ribbon-like M1S44_17330 PF01131 DNA topoisomerase M1S44_17330 PF01751 Toprim domain M1S44_17330 PF01396 Topoisomerase DNA binding C4 zinc finger M1S44_17340 PF01638 HxlR-like helix-turn-helix M1S44_17345 PF08240 Alcohol dehydrogenase GroES-like domain M1S44_17345 PF00107 Zinc-binding dehydrogenase M1S44_17350 PF04102 SlyX M1S44_17355 PF12848 ABC transporter M1S44_17355 PF00005 ABC transporter M1S44_17355 PF16326 ABC transporter C-terminal domain M1S44_17360 PF01810 LysE type translocator M1S44_17365 PF03279 Bacterial lipid A biosynthesis acyltransferase M1S44_17375 PF00375 Sodium:dicarboxylate symporter family M1S44_17385 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1S44_17385 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1S44_17405 PF01416 tRNA pseudouridine synthase M1S44_17415 PF01176 Translation initiation factor 1A / IF-1 M1S44_17430 PF00180 Isocitrate/isopropylmalate dehydrogenase M1S44_17440 PF00694 Aconitase C-terminal domain M1S44_17445 PF00330 Aconitase family (aconitate hydratase) M1S44_17455 PF03466 LysR substrate binding domain M1S44_17455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_17475 PF00293 NUDIX domain M1S44_17480 PF01590 GAF domain M1S44_17480 PF05524 PEP-utilising enzyme, N-terminal M1S44_17480 PF02896 PEP-utilising enzyme, TIM barrel domain M1S44_17480 PF00391 PEP-utilising enzyme, mobile domain M1S44_17485 PF00141 Peroxidase M1S44_17490 PF12706 Beta-lactamase superfamily domain M1S44_17495 PF03466 LysR substrate binding domain M1S44_17495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_17505 PF02798 Glutathione S-transferase, N-terminal domain M1S44_17510 PF08279 HTH domain M1S44_17510 PF13280 WYL domain M1S44_17515 PF13419 Haloacid dehalogenase-like hydrolase M1S44_17520 PF00849 RNA pseudouridylate synthase M1S44_17520 PF01479 S4 domain M1S44_17525 PF12111 Polyribonucleotide phosphorylase C terminal M1S44_17525 PF00575 S1 RNA binding domain M1S44_17525 PF10150 Ribonuclease E/G family M1S44_17530 PF13193 AMP-binding enzyme C-terminal domain M1S44_17530 PF00501 AMP-binding enzyme M1S44_17545 PF03466 LysR substrate binding domain M1S44_17545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_17550 PF00106 short chain dehydrogenase M1S44_17555 PF06969 HemN C-terminal domain M1S44_17555 PF04055 Radical SAM superfamily M1S44_17565 PF01554 MatE M1S44_17570 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S44_17570 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_17570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_17575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_17575 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M1S44_17580 PF03109 ABC1 family M1S44_17585 PF01197 Ribosomal protein L31 M1S44_17600 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1S44_17620 PF03884 DNA gyrase inhibitor YacG M1S44_17625 PF00753 Metallo-beta-lactamase superfamily M1S44_17630 PF00762 Ferrochelatase M1S44_17640 PF01177 Asp/Glu/Hydantoin racemase M1S44_17655 PF01206 Sulfurtransferase TusA M1S44_17660 PF00571 CBS domain M1S44_17660 PF03471 Transporter associated domain M1S44_17665 PF00795 Carbon-nitrogen hydrolase M1S44_17670 PF01588 Putative tRNA binding domain M1S44_17680 PF08334 Type II secretion system (T2SS), protein G M1S44_17680 PF07963 Prokaryotic N-terminal methylation motif M1S44_17685 PF00482 Type II secretion system (T2SS), protein F M1S44_17695 PF00999 Sodium/hydrogen exchanger family M1S44_17695 PF02254 TrkA-N domain M1S44_17700 PF01430 Hsp33 protein M1S44_17710 PF01556 DnaJ C terminal domain M1S44_17710 PF00226 DnaJ domain M1S44_17720 PF01544 CorA-like Mg2+ transporter protein M1S44_17725 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M1S44_17725 PF01138 3' exoribonuclease family, domain 1 M1S44_17725 PF03725 3' exoribonuclease family, domain 2 M1S44_17725 PF00575 S1 RNA binding domain M1S44_17725 PF00013 KH domain M1S44_17730 PF00312 Ribosomal protein S15 M1S44_17735 PF00144 Beta-lactamase M1S44_17740 PF13538 UvrD-like helicase C-terminal domain M1S44_17745 PF00580 UvrD/REP helicase N-terminal domain M1S44_17745 PF12705 PD-(D/E)XK nuclease superfamily M1S44_17745 PF13361 UvrD-like helicase C-terminal domain M1S44_17750 PF17946 RecC C-terminal domain M1S44_17760 PF03976 Polyphosphate kinase 2 (PPK2) M1S44_17770 PF01209 ubiE/COQ5 methyltransferase family M1S44_17780 PF03109 ABC1 family M1S44_17785 PF01494 FAD binding domain M1S44_17790 PF01502 Phosphoribosyl-AMP cyclohydrolase M1S44_17805 PF13244 Domain of unknown function (DUF4040) M1S44_17805 PF00361 Proton-conducting membrane transporter M1S44_17805 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1S44_17805 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M1S44_17810 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1S44_17815 PF00361 Proton-conducting membrane transporter M1S44_17820 PF01899 Na+/H+ ion antiporter subunit M1S44_17825 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M1S44_17830 PF03334 Na+/H+ antiporter subunit M1S44_17835 PF02033 Ribosome-binding factor A M1S44_17840 PF00009 Elongation factor Tu GTP binding domain M1S44_17840 PF11987 Translation-initiation factor 2 M1S44_17840 PF08364 Bacterial translation initiation factor IF-2 associated region M1S44_17840 PF04760 Translation initiation factor IF-2, N-terminal region M1S44_17845 PF13184 NusA-like KH domain M1S44_17845 PF08529 NusA N-terminal domain M1S44_17845 PF00575 S1 RNA binding domain M1S44_17850 PF02576 RimP N-terminal domain M1S44_17850 PF17384 RimP C-terminal SH3 domain M1S44_17870 PF03840 Preprotein translocase SecG subunit M1S44_17875 PF00121 Triosephosphate isomerase M1S44_17880 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M1S44_17880 PF00437 Type II/IV secretion system protein M1S44_17885 PF00482 Type II secretion system (T2SS), protein F M1S44_17895 PF06750 Bacterial Peptidase A24 N-terminal domain M1S44_17895 PF01478 Type IV leader peptidase family M1S44_17900 PF01121 Dephospho-CoA kinase M1S44_17910 PF00588 SpoU rRNA Methylase family M1S44_17910 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1S44_17915 PF06865 Pyrimidine/purine nucleoside phosphorylase M1S44_17925 PF02463 RecF/RecN/SMC N terminal domain M1S44_17930 PF02622 Uncharacterized ACR, COG1678 M1S44_17935 PF03652 Holliday junction resolvase M1S44_17940 PF13533 Biotin-lipoyl like M1S44_17965 PF02805 Metal binding domain of Ada M1S44_17965 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1S44_17965 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1S44_17965 PF12833 Helix-turn-helix domain M1S44_17970 PF01066 CDP-alcohol phosphatidyltransferase M1S44_17980 PF08459 UvrC Helix-hairpin-helix N-terminal M1S44_17980 PF02151 UvrB/uvrC motif M1S44_17980 PF01541 GIY-YIG catalytic domain M1S44_18000 PF00378 Enoyl-CoA hydratase/isomerase M1S44_18000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M1S44_18000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M1S44_18005 PF02803 Thiolase, C-terminal domain M1S44_18005 PF00108 Thiolase, N-terminal domain M1S44_18025 PF09278 MerR, DNA binding M1S44_18025 PF00376 MerR family regulatory protein M1S44_18035 PF01323 DSBA-like thioredoxin domain M1S44_18050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_18050 PF00183 Hsp90 protein M1S44_18065 PF13726 Na+-H+ antiporter family M1S44_18065 PF03553 Na+/H+ antiporter family M1S44_18070 PF00561 alpha/beta hydrolase fold M1S44_18090 PF04997 RNA polymerase Rpb1, domain 1 M1S44_18090 PF00623 RNA polymerase Rpb1, domain 2 M1S44_18090 PF04983 RNA polymerase Rpb1, domain 3 M1S44_18090 PF05000 RNA polymerase Rpb1, domain 4 M1S44_18090 PF04998 RNA polymerase Rpb1, domain 5 M1S44_18095 PF04563 RNA polymerase beta subunit M1S44_18095 PF04561 RNA polymerase Rpb2, domain 2 M1S44_18095 PF04565 RNA polymerase Rpb2, domain 3 M1S44_18095 PF10385 RNA polymerase beta subunit external 1 domain M1S44_18095 PF00562 RNA polymerase Rpb2, domain 6 M1S44_18095 PF04560 RNA polymerase Rpb2, domain 7 M1S44_18100 PF00542 Ribosomal protein L7/L12 C-terminal domain M1S44_18100 PF16320 Ribosomal protein L7/L12 dimerisation domain M1S44_18105 PF00466 Ribosomal protein L10 M1S44_18110 PF00687 Ribosomal protein L1p/L10e family M1S44_18115 PF00298 Ribosomal protein L11, RNA binding domain M1S44_18115 PF03946 Ribosomal protein L11, N-terminal domain M1S44_18120 PF02357 Transcription termination factor nusG M1S44_18120 PF00467 KOW motif M1S44_18125 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M1S44_18135 PF00009 Elongation factor Tu GTP binding domain M1S44_18135 PF03144 Elongation factor Tu domain 2 M1S44_18135 PF03143 Elongation factor Tu C-terminal domain M1S44_18160 PF04715 Anthranilate synthase component I, N terminal region M1S44_18160 PF00425 chorismate binding enzyme M1S44_18165 PF13419 Haloacid dehalogenase-like hydrolase M1S44_18170 PF12401 Protein of unknown function (DUF2662) M1S44_18170 PF00498 FHA domain M1S44_18175 PF00263 Bacterial type II and III secretion system protein M1S44_18175 PF03958 Bacterial type II/III secretion system short domain M1S44_18190 PF00816 H-NS histone family M1S44_18215 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M1S44_18215 PF03900 Porphobilinogen deaminase, C-terminal domain M1S44_18220 PF04397 LytTr DNA-binding domain M1S44_18220 PF00072 Response regulator receiver domain M1S44_18225 PF07694 5TMR of 5TMR-LYT M1S44_18225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_18225 PF06580 Histidine kinase M1S44_18230 PF14698 Argininosuccinate lyase C-terminal M1S44_18230 PF00206 Lyase M1S44_18235 PF04362 Bacterial Fe(2+) trafficking M1S44_18240 PF01895 PhoU domain M1S44_18245 PF02321 Outer membrane efflux protein M1S44_18250 PF00892 EamA-like transporter family M1S44_18265 PF13667 ThiC-associated domain M1S44_18265 PF01964 Radical SAM ThiC family M1S44_18270 PF00293 NUDIX domain M1S44_18275 PF00149 Calcineurin-like phosphoesterase M1S44_18280 PF01258 Prokaryotic dksA/traR C4-type zinc finger M1S44_18285 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1S44_18290 PF01098 Cell cycle protein M1S44_18295 PF02875 Mur ligase family, glutamate ligase domain M1S44_18295 PF08245 Mur ligase middle domain M1S44_18305 PF07664 Ferrous iron transport protein B C terminus M1S44_18305 PF02421 Ferrous iron transport protein B M1S44_18305 PF07670 Nucleoside recognition M1S44_18315 PF02899 Phage integrase, N-terminal SAM-like domain M1S44_18315 PF00589 Phage integrase family M1S44_18320 PF13098 Thioredoxin-like domain M1S44_18320 PF10411 Disulfide bond isomerase protein N-terminus M1S44_18325 PF01842 ACT domain M1S44_18325 PF03447 Homoserine dehydrogenase, NAD binding domain M1S44_18325 PF00742 Homoserine dehydrogenase M1S44_18330 PF00291 Pyridoxal-phosphate dependent enzyme M1S44_18335 PF00768 D-alanyl-D-alanine carboxypeptidase M1S44_18340 PF00196 Bacterial regulatory proteins, luxR family M1S44_18340 PF00072 Response regulator receiver domain M1S44_18345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1S44_18345 PF00512 His Kinase A (phospho-acceptor) domain M1S44_18350 PF00072 Response regulator receiver domain M1S44_18350 PF00158 Sigma-54 interaction domain M1S44_18350 PF02954 Bacterial regulatory protein, Fis family M1S44_18355 PF00595 PDZ domain M1S44_18355 PF03572 Peptidase family S41 M1S44_18360 PF01676 Metalloenzyme superfamily M1S44_18360 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M1S44_18365 PF03739 Lipopolysaccharide export system permease LptF/LptG M1S44_18375 PF00883 Cytosol aminopeptidase family, catalytic domain M1S44_18375 PF02789 Cytosol aminopeptidase family, N-terminal domain M1S44_18395 PF00677 Lumazine binding domain M1S44_18405 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1S44_18405 PF01872 RibD C-terminal domain M1S44_18410 PF03477 ATP cone domain M1S44_18415 PF00909 Ammonium Transporter Family M1S44_18420 PF00543 Nitrogen regulatory protein P-II M1S44_18440 PF01636 Phosphotransferase enzyme family M1S44_18445 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M1S44_18465 PF02909 Tetracyclin repressor-like, C-terminal domain M1S44_18465 PF00440 Bacterial regulatory proteins, tetR family M1S44_18470 PF07690 Major Facilitator Superfamily M1S44_18480 PF00916 Sulfate permease family M1S44_18480 PF01740 STAS domain M1S44_18485 PF00582 Universal stress protein family M1S44_18505 PF00665 Integrase core domain M1S44_18520 PF00392 Bacterial regulatory proteins, gntR family M1S44_18520 PF00155 Aminotransferase class I and II M1S44_18530 PF00701 Dihydrodipicolinate synthetase family M1S44_18545 PF03573 outer membrane porin, OprD family M1S44_18550 PF00719 Inorganic pyrophosphatase M1S44_18565 PF13193 AMP-binding enzyme C-terminal domain M1S44_18565 PF00501 AMP-binding enzyme M1S44_18570 PF03989 DNA gyrase C-terminal domain, beta-propeller M1S44_18570 PF00521 DNA gyrase/topoisomerase IV, subunit A M1S44_18575 PF07690 Major Facilitator Superfamily M1S44_18580 PF03458 UPF0126 domain M1S44_18585 PF02810 SEC-C motif M1S44_18590 PF03471 Transporter associated domain M1S44_18590 PF03741 Integral membrane protein TerC family M1S44_18595 PF03641 Possible lysine decarboxylase M1S44_18600 PF07690 Major Facilitator Superfamily M1S44_18610 PF11798 IMS family HHH motif M1S44_18610 PF00817 impB/mucB/samB family M1S44_18610 PF11799 impB/mucB/samB family C-terminal domain M1S44_18630 PF04055 Radical SAM superfamily M1S44_18630 PF11842 Domain of unknown function (DUF3362) M1S44_18630 PF08497 Radical SAM N-terminal M1S44_18650 PF03358 NADPH-dependent FMN reductase M1S44_18660 PF00291 Pyridoxal-phosphate dependent enzyme M1S44_18720 PF01327 Polypeptide deformylase M1S44_18730 PF17782 DprA winged helix domain M1S44_18730 PF02481 DNA recombination-mediator protein A M1S44_18735 PF01300 Telomere recombination M1S44_18740 PF00892 EamA-like transporter family M1S44_18745 PF00440 Bacterial regulatory proteins, tetR family M1S44_18750 PF07690 Major Facilitator Superfamily M1S44_18760 PF00255 Glutathione peroxidase M1S44_18770 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M1S44_18775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S44_18775 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S44_18780 PF00231 ATP synthase M1S44_18785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1S44_18785 PF00306 ATP synthase alpha/beta chain, C terminal domain M1S44_18785 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1S44_18790 PF00213 ATP synthase delta (OSCP) subunit M1S44_18795 PF00430 ATP synthase B/B' CF(0) M1S44_18800 PF00137 ATP synthase subunit C M1S44_18805 PF00119 ATP synthase A chain M1S44_18825 PF00005 ABC transporter M1S44_18830 PF00950 ABC 3 transport family M1S44_18835 PF01810 LysE type translocator M1S44_18840 PF04261 Dyp-type peroxidase family M1S44_18850 PF00390 Malic enzyme, N-terminal domain M1S44_18850 PF03949 Malic enzyme, NAD binding domain M1S44_18855 PF03485 Arginyl tRNA synthetase N terminal domain M1S44_18855 PF05746 DALR anticodon binding domain M1S44_18855 PF00750 tRNA synthetases class I (R) M1S44_18875 PF02678 Pirin M1S44_18875 PF05726 Pirin C-terminal cupin domain M1S44_18885 PF03551 Transcriptional regulator PadR-like family M1S44_18890 PF13427 Domain of unknown function (DUF4111) M1S44_18890 PF01909 Nucleotidyltransferase domain M1S44_18895 PF02540 NAD synthase M1S44_18895 PF00117 Glutamine amidotransferase class-I M1S44_18895 PF00958 GMP synthase C terminal domain M1S44_18900 PF04286 Protein of unknown function (DUF445) M1S44_18905 PF07681 DoxX M1S44_18910 PF09335 SNARE associated Golgi protein M1S44_18925 PF13614 AAA domain M1S44_18935 PF01722 BolA-like protein M1S44_18950 PF01648 4'-phosphopantetheinyl transferase superfamily M1S44_18955 PF12697 Alpha/beta hydrolase family M1S44_18975 PF16197 Ketoacyl-synthetase C-terminal extension M1S44_18975 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S44_18975 PF08242 Methyltransferase domain M1S44_18975 PF00550 Phosphopantetheine attachment site M1S44_18975 PF14765 Polyketide synthase dehydratase M1S44_18975 PF00975 Thioesterase domain M1S44_18975 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S44_18980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_18980 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_18980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_18985 PF00501 AMP-binding enzyme M1S44_18990 PF03472 Autoinducer binding domain M1S44_18990 PF00196 Bacterial regulatory proteins, luxR family M1S44_19000 PF00765 Autoinducer synthase M1S44_19005 PF00083 Sugar (and other) transporter M1S44_19005 PF07690 Major Facilitator Superfamily M1S44_19010 PF00378 Enoyl-CoA hydratase/isomerase M1S44_19015 PF00378 Enoyl-CoA hydratase/isomerase M1S44_19020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1S44_19020 PF02770 Acyl-CoA dehydrogenase, middle domain M1S44_19020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1S44_19025 PF13193 AMP-binding enzyme C-terminal domain M1S44_19025 PF00501 AMP-binding enzyme M1S44_19030 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M1S44_19030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1S44_19035 PF00171 Aldehyde dehydrogenase family M1S44_19045 PF00324 Amino acid permease M1S44_19050 PF00324 Amino acid permease M1S44_19055 PF01042 Endoribonuclease L-PSP M1S44_19060 PF00842 Alanine racemase, C-terminal domain M1S44_19060 PF01168 Alanine racemase, N-terminal domain M1S44_19065 PF01266 FAD dependent oxidoreductase M1S44_19070 PF01037 Lrp/AsnC ligand binding domain M1S44_19080 PF07715 TonB-dependent Receptor Plug Domain M1S44_19080 PF00593 TonB dependent receptor M1S44_19095 PF00849 RNA pseudouridylate synthase M1S44_19110 PF00440 Bacterial regulatory proteins, tetR family M1S44_19110 PF08361 MAATS-type transcriptional repressor, C-terminal region M1S44_19120 PF00109 Beta-ketoacyl synthase, N-terminal domain M1S44_19120 PF02801 Beta-ketoacyl synthase, C-terminal domain M1S44_19155 PF00694 Aconitase C-terminal domain M1S44_19155 PF00330 Aconitase family (aconitate hydratase) M1S44_19160 PF00285 Citrate synthase, C-terminal domain M1S44_19170 PF00392 Bacterial regulatory proteins, gntR family M1S44_19170 PF07729 FCD domain M1S44_19180 PF00155 Aminotransferase class I and II M1S44_19185 PF01565 FAD binding domain M1S44_19185 PF09330 D-lactate dehydrogenase, membrane binding M1S44_19190 PF01070 FMN-dependent dehydrogenase M1S44_19195 PF07729 FCD domain M1S44_19195 PF00392 Bacterial regulatory proteins, gntR family M1S44_19200 PF02652 L-lactate permease M1S44_19205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1S44_19205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1S44_19205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1S44_19205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1S44_19210 PF16363 GDP-mannose 4,6 dehydratase M1S44_19215 PF00342 Phosphoglucose isomerase M1S44_19220 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S44_19220 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S44_19220 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S44_19225 PF00483 Nucleotidyl transferase M1S44_19230 PF02397 Bacterial sugar transferase M1S44_19235 PF00535 Glycosyl transferase family 2 M1S44_19265 PF08666 SAF domain M1S44_19265 PF03102 NeuB family M1S44_19280 PF02348 Cytidylyltransferase M1S44_19285 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M1S44_19290 PF02719 Polysaccharide biosynthesis protein M1S44_19295 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1S44_19295 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1S44_19295 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1S44_19300 PF18412 Outer-membrane lipoprotein Wza C-terminal domain M1S44_19300 PF10531 SLBB domain M1S44_19300 PF02563 Polysaccharide biosynthesis/export protein M1S44_19305 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1S44_19310 PF13614 AAA domain M1S44_19310 PF02706 Chain length determinant protein M1S44_19310 PF13807 G-rich domain on putative tyrosine kinase M1S44_19315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S44_19315 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S44_19320 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M1S44_19320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S44_19325 PF03023 Lipid II flippase MurJ M1S44_19330 PF01510 N-acetylmuramoyl-L-alanine amidase M1S44_19335 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M1S44_19335 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M1S44_19345 PF04185 Phosphoesterase family M1S44_19345 PF05506 Domain of unknown function (DUF756) M1S44_19355 PF03725 3' exoribonuclease family, domain 2 M1S44_19355 PF01138 3' exoribonuclease family, domain 1 M1S44_19360 PF00487 Fatty acid desaturase M1S44_19365 PF00175 Oxidoreductase NAD-binding domain M1S44_19370 PF00440 Bacterial regulatory proteins, tetR family M1S44_19375 PF08360 QacR-like protein, C-terminal region M1S44_19375 PF00440 Bacterial regulatory proteins, tetR family M1S44_19380 PF01323 DSBA-like thioredoxin domain M1S44_19390 PF13419 Haloacid dehalogenase-like hydrolase M1S44_19395 PF00106 short chain dehydrogenase M1S44_19410 PF00696 Amino acid kinase family M1S44_19410 PF00583 Acetyltransferase (GNAT) family M1S44_19415 PF09084 NMT1/THI5 like M1S44_19420 PF09084 NMT1/THI5 like M1S44_19425 PF00296 Luciferase-like monooxygenase M1S44_19430 PF00528 Binding-protein-dependent transport system inner membrane component M1S44_19435 PF00005 ABC transporter M1S44_19440 PF08362 YcdC-like protein, C-terminal region M1S44_19440 PF00440 Bacterial regulatory proteins, tetR family M1S44_19445 PF01048 Phosphorylase superfamily M1S44_19455 PF01687 Riboflavin kinase M1S44_19455 PF06574 FAD synthetase M1S44_19460 PF00133 tRNA synthetases class I (I, L, M and V) M1S44_19460 PF08264 Anticodon-binding domain of tRNA M1S44_19460 PF06827 Zinc finger found in FPG and IleRS M1S44_19465 PF01252 Signal peptidase (SPase) II M1S44_19470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1S44_19510 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1S44_19515 PF07859 alpha/beta hydrolase fold M1S44_19535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1S44_19535 PF03466 LysR substrate binding domain M1S44_19540 PF01025 GrpE M1S44_19545 PF00012 Hsp70 protein M1S44_19565 PF13406 Transglycosylase SLT domain M1S44_19570 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M1S44_19570 PF02222 ATP-grasp domain M1S44_19575 PF00731 AIR carboxylase M1S44_19585 PF01225 Mur ligase family, catalytic domain M1S44_19585 PF02875 Mur ligase family, glutamate ligase domain M1S44_19585 PF08245 Mur ligase middle domain M1S44_19595 PF01569 PAP2 superfamily M1S44_19600 PF03741 Integral membrane protein TerC family M1S44_19610 PF03738 Glutathionylspermidine synthase preATP-grasp M1S44_19615 PF00355 Rieske [2Fe-2S] domain M1S44_19620 PF01979 Amidohydrolase family M1S44_19625 PF00156 Phosphoribosyl transferase domain M1S44_19635 PF13098 Thioredoxin-like domain M1S44_19635 PF10411 Disulfide bond isomerase protein N-terminus M1S44_19640 PF01545 Cation efflux family M1S44_19640 PF16916 Dimerisation domain of Zinc Transporter M1S44_19645 PF02583 Metal-sensitive transcriptional repressor M1S44_19650 PF01926 50S ribosome-binding GTPase M1S44_19650 PF12631 MnmE helical domain M1S44_19650 PF10396 GTP-binding protein TrmE N-terminus M1S44_19655 PF02096 60Kd inner membrane protein M1S44_19655 PF14849 YidC periplasmic domain M1S44_19660 PF01809 Putative membrane protein insertion efficiency factor M1S44_19665 PF00825 Ribonuclease P M1S44_19670 PF00468 Ribosomal protein L34 M1S44_19675 PF01051 Initiator Replication protein M1S44_19730 PF03389 MobA/MobL family M1S44_19750 PF05973 Phage derived protein Gp49-like (DUF891) M1S44_19795 PF03389 MobA/MobL family