RU84_00005 IPR001957 Chromosomal replication control, initiator DnaA RU84_00005 IPR003593 AAA+ ATPase domain RU84_00005 IPR010921 Trp repressor/replication initiator RU84_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal RU84_00005 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) RU84_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site RU84_00005 IPR020591 Chromosomal replication control, initiator DnaA-like RU84_00005 IPR024633 DnaA N-terminal domain RU84_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_00005 IPR038454 RU84_00005 RU84_00010 IPR001001 DNA polymerase III, beta chain RU84_00010 IPR022634 DNA polymerase III, beta chain, N-terminal RU84_00010 IPR022635 DNA polymerase III, beta chain, C-terminal RU84_00010 IPR022637 DNA polymerase III, beta chain, central RU84_00015 IPR001238 DNA-binding, RecF RU84_00015 IPR003395 RecF/RecN/SMC, N-terminal RU84_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_00020 IPR000565 DNA topoisomerase, type IIA, subunit B RU84_00020 IPR001241 DNA topoisomerase, type IIA RU84_00020 IPR002288 DNA gyrase B subunit, C-terminal RU84_00020 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_00020 IPR006171 Toprim domain RU84_00020 IPR011557 DNA gyrase, subunit B RU84_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RU84_00020 IPR013759 DNA topoisomerase, type IIA, central domain RU84_00020 IPR013760 DNA topoisomerase, type IIA-like domain RU84_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RU84_00020 IPR018522 DNA topoisomerase, type IIA, conserved site RU84_00020 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_00020 IPR036890 RU84_00020 RU84_00025 IPR009155 Cytochrome b562 RU84_00025 IPR010980 Cytochrome c/b562 RU84_00030 IPR032816 RU84_00030 RU84_00035 IPR003439 ABC transporter-like RU84_00035 IPR003593 AAA+ ATPase domain RU84_00035 IPR017871 ABC transporter, conserved site RU84_00035 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_00035 IPR032781 RU84_00035 RU84_00040 IPR038404 RU84_00040 RU84_00045 IPR038404 RU84_00045 RU84_00050 IPR038404 RU84_00050 RU84_00055 IPR000361 FeS cluster biogenesis RU84_00055 IPR016092 FeS cluster insertion protein RU84_00055 IPR017870 FeS cluster insertion, C-terminal, conserved site RU84_00055 IPR023063 Iron-sulfur cluster insertion protein ErpA RU84_00055 IPR035903 RU84_00055 RU84_00060 IPR000073 Alpha/beta hydrolase fold-1 RU84_00060 IPR000639 Epoxide hydrolase-like RU84_00060 IPR029058 Alpha/Beta hydrolase fold RU84_00065 IPR005338 Anhydro-N-acetylmuramic acid kinase RU84_00070 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RU84_00070 IPR002305 Aminoacyl-tRNA synthetase, class Ic RU84_00070 IPR002307 Tyrosine-tRNA ligase RU84_00070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_00070 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 RU84_00070 IPR036986 RU84_00070 RU84_00105 IPR004045 Glutathione S-transferase, N-terminal RU84_00105 IPR004046 Glutathione S-transferase, C-terminal RU84_00105 IPR036249 RU84_00105 RU84_00105 IPR036282 RU84_00105 RU84_00110 IPR026387 Outer membrane protein RU84_00115 IPR000175 Sodium:neurotransmitter symporter RU84_00115 IPR037272 RU84_00115 RU84_00120 IPR031596 RU84_00120 RU84_00125 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p RU84_00125 IPR004573 rRNA small subunit methyltransferase B RU84_00125 IPR006027 NusB/RsmB/TIM44 RU84_00125 IPR023267 RNA (C5-cytosine) methyltransferase RU84_00125 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_00125 IPR031341 RU84_00125 RU84_00125 IPR035926 RU84_00125 RU84_00130 IPR002376 Formyl transferase, N-terminal RU84_00130 IPR005793 Formyl transferase, C-terminal RU84_00130 IPR005794 Methionyl-tRNA formyltransferase RU84_00130 IPR011034 Formyl transferase, C-terminal-like RU84_00130 IPR036477 RU84_00130 RU84_00130 IPR037022 RU84_00130 RU84_00135 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RU84_00135 IPR004404 Dihydroxy-acid dehydratase RU84_00135 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RU84_00135 IPR037237 RU84_00135 RU84_00140 IPR036249 RU84_00140 RU84_00145 IPR002781 Transmembrane protein TauE like RU84_00150 IPR000847 Transcription regulator HTH, LysR RU84_00150 IPR005119 LysR, substrate-binding RU84_00150 IPR036388 RU84_00150 RU84_00150 IPR036390 RU84_00150 RU84_00155 IPR006042 Xanthine/uracil permease RU84_00155 IPR006043 Xanthine/uracil/vitamin C permease RU84_00160 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RU84_00160 IPR018129 Phosphoenolpyruvate carboxylase, active site RU84_00160 IPR021135 Phosphoenolpyruvate carboxylase RU84_00160 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type RU84_00160 IPR033129 RU84_00160 RU84_00165 IPR001647 DNA-binding HTH domain, TetR-type RU84_00165 IPR009057 Homeodomain-like RU84_00165 IPR036271 RU84_00165 RU84_00165 IPR039536 RU84_00165 RU84_00170 IPR006143 RND efflux pump, membrane fusion protein RU84_00170 IPR032317 RU84_00170 RU84_00175 IPR001036 Acriflavin resistance protein RU84_00175 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RU84_00185 IPR001305 Heat shock protein DnaJ, cysteine-rich domain RU84_00185 IPR001623 DnaJ domain RU84_00185 IPR002939 Chaperone DnaJ, C-terminal RU84_00185 IPR008971 HSP40/DnaJ peptide-binding RU84_00185 IPR012724 Chaperone DnaJ RU84_00185 IPR018253 DnaJ domain, conserved site RU84_00185 IPR036410 RU84_00185 RU84_00185 IPR036869 RU84_00185 RU84_00195 IPR000846 Dihydrodipicolinate reductase, N-terminal RU84_00195 IPR022663 Dihydrodipicolinate reductase, C-terminal RU84_00195 IPR022664 Dihydrodipicolinate reductase, conserved site RU84_00195 IPR023940 Dihydrodipicolinate reductase, bacterial RU84_00195 IPR036291 RU84_00195 RU84_00200 IPR002913 START domain RU84_00200 IPR023393 START-like domain RU84_00200 IPR028347 START domain-containing protein RU84_00205 IPR011701 Major facilitator superfamily RU84_00205 IPR036259 RU84_00205 RU84_00210 IPR018170 Aldo/keto reductase, conserved site RU84_00210 IPR020471 Aldo/keto reductase subgroup RU84_00210 IPR023210 NADP-dependent oxidoreductase domain RU84_00210 IPR036812 RU84_00210 RU84_00215 IPR000847 Transcription regulator HTH, LysR RU84_00215 IPR005119 LysR, substrate-binding RU84_00215 IPR036388 RU84_00215 RU84_00215 IPR036390 RU84_00215 RU84_00225 IPR000524 Transcription regulator HTH, GntR RU84_00225 IPR004839 Aminotransferase, class I/classII RU84_00225 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_00225 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_00225 IPR015424 Pyridoxal phosphate-dependent transferase RU84_00225 IPR036388 RU84_00225 RU84_00225 IPR036390 RU84_00225 RU84_00230 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RU84_00230 IPR011032 GroES (chaperonin 10)-like RU84_00230 IPR013149 Alcohol dehydrogenase, C-terminal RU84_00230 IPR013154 Alcohol dehydrogenase GroES-like RU84_00230 IPR020843 Polyketide synthase, enoylreductase RU84_00230 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RU84_00230 IPR036291 RU84_00230 RU84_00235 IPR005019 Methyladenine glycosylase RU84_00235 IPR011257 DNA glycosylase RU84_00245 IPR011055 Duplicated hybrid motif RU84_00245 IPR016047 Peptidase M23 RU84_00250 IPR000445 Helix-hairpin-helix motif RU84_00250 IPR003265 HhH-GPD domain RU84_00250 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif RU84_00250 IPR004035 Endonuclease III, iron-sulphur binding site RU84_00250 IPR004036 Endonuclease III-like, conserved site-2 RU84_00250 IPR005760 A/G-specific adenine glycosylase MutY RU84_00250 IPR011257 DNA glycosylase RU84_00250 IPR015797 NUDIX hydrolase domain-like RU84_00250 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RU84_00250 IPR029119 MutY, C-terminal RU84_00255 IPR001310 Histidine triad (HIT) protein RU84_00255 IPR036265 RU84_00255 RU84_00260 IPR002925 Dienelactone hydrolase RU84_00260 IPR029058 Alpha/Beta hydrolase fold RU84_00265 IPR009760 Protein of unknown function DUF1328 RU84_00270 IPR005358 Putative zinc- or iron-chelating domain containing protein RU84_00270 IPR008228 Uncharacterised conserved protein UCP006173 RU84_00275 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase RU84_00275 IPR011042 Six-bladed beta-propeller, TolB-like RU84_00275 IPR012938 Glucose/Sorbosone dehydrogenase RU84_00280 IPR003593 AAA+ ATPase domain RU84_00280 IPR003959 ATPase, AAA-type, core RU84_00280 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RU84_00280 IPR021886 MgsA AAA+ ATPase C-terminal RU84_00280 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_00280 IPR032423 RU84_00280 RU84_00285 IPR000292 Formate/nitrite transporter RU84_00285 IPR023271 Aquaporin-like RU84_00295 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase RU84_00295 IPR018236 SAICAR synthetase, conserved site RU84_00295 IPR028923 SAICAR synthetase/ADE2, N-terminal RU84_00305 IPR002220 DapA-like RU84_00305 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RU84_00305 IPR013785 Aldolase-type TIM barrel RU84_00305 IPR020624 Dihydrodipicolinate synthetase, conserved site RU84_00305 IPR020625 Dihydrodipicolinate synthetase, active site RU84_00310 IPR000868 Isochorismatase-like RU84_00310 IPR036380 RU84_00310 RU84_00315 IPR002657 Bile acid:sodium symporter RU84_00315 IPR038770 RU84_00315 RU84_00320 IPR002528 Multi antimicrobial extrusion protein RU84_00325 IPR007553 Domain of unknown function DUF523 RU84_00330 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RU84_00330 IPR005956 4-hydroxyphenylpyruvate dioxygenase RU84_00330 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RU84_00335 IPR005471 Transcription regulator IclR, N-terminal RU84_00335 IPR014757 Transcription regulator IclR, C-terminal RU84_00335 IPR029016 GAF domain-like RU84_00335 IPR036388 RU84_00335 RU84_00335 IPR036390 RU84_00335 RU84_00340 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II RU84_00340 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RU84_00340 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RU84_00345 IPR004045 Glutathione S-transferase, N-terminal RU84_00345 IPR004046 Glutathione S-transferase, C-terminal RU84_00345 IPR005955 Maleylacetoacetate isomerase RU84_00345 IPR036249 RU84_00345 RU84_00345 IPR036282 RU84_00345 RU84_00350 IPR005959 Fumarylacetoacetase RU84_00350 IPR011234 Fumarylacetoacetase, C-terminal-related RU84_00350 IPR015377 Fumarylacetoacetase, N-terminal RU84_00350 IPR036462 RU84_00350 RU84_00350 IPR036663 RU84_00350 RU84_00355 IPR002293 Amino acid/polyamine transporter I RU84_00355 IPR004840 Amino acid permease, conserved site RU84_00355 IPR004841 Amino acid permease/ SLC12A domain RU84_00360 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain RU84_00360 IPR013230 Peptidase M15A, C-terminal RU84_00365 IPR003495 CobW/HypB/UreG domain RU84_00365 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RU84_00365 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_00370 IPR002656 Acyltransferase 3 RU84_00375 IPR000524 Transcription regulator HTH, GntR RU84_00375 IPR010248 Histidine utilization repressor RU84_00375 IPR011663 UbiC transcription regulator-associated RU84_00375 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RU84_00375 IPR036388 RU84_00375 RU84_00375 IPR036390 RU84_00375 RU84_00380 IPR010282 Uncharacterised protein family HutD/Ves RU84_00380 IPR011051 RmlC-like cupin domain RU84_00380 IPR014710 RmlC-like jelly roll fold RU84_00385 IPR023636 Urocanase conserved site RU84_00385 IPR023637 Urocanase RU84_00385 IPR035085 RU84_00385 RU84_00385 IPR035400 RU84_00385 RU84_00385 IPR035401 RU84_00385 RU84_00385 IPR036190 RU84_00385 RU84_00385 IPR038364 RU84_00385 RU84_00390 IPR001106 Aromatic amino acid lyase RU84_00390 IPR005921 Histidine ammonia-lyase RU84_00390 IPR008948 L-Aspartase-like RU84_00390 IPR022313 Phenylalanine/histidine ammonia-lyases, active site RU84_00390 IPR024083 Fumarase/histidase, N-terminal RU84_00395 IPR002293 Amino acid/polyamine transporter I RU84_00395 IPR004840 Amino acid permease, conserved site RU84_00395 IPR004841 Amino acid permease/ SLC12A domain RU84_00400 IPR005920 Imidazolonepropionase RU84_00400 IPR006680 Amidohydrolase 1 RU84_00400 IPR011059 Metal-dependent hydrolase, composite domain RU84_00400 IPR032466 RU84_00400 RU84_00405 IPR005923 Formiminoglutamase RU84_00405 IPR006035 Ureohydrolase RU84_00405 IPR020855 Ureohydrolase, manganese-binding site RU84_00405 IPR023696 Ureohydrolase domain RU84_00410 IPR010281 Protein of unknown function DUF885 RU84_00415 IPR006439 HAD hydrolase, subfamily IA RU84_00415 IPR023198 Phosphoglycolate phosphatase, domain 2 RU84_00415 IPR023214 HAD-like domain RU84_00415 IPR036412 RU84_00415 RU84_00420 IPR001920 Asp/Glu racemase RU84_00420 IPR004391 Glutamate racemase RU84_00420 IPR015942 Asp/Glu/hydantoin racemase RU84_00420 IPR018187 Asp/Glu racemase, active site RU84_00420 IPR033134 RU84_00420 RU84_00425 IPR001347 Sugar isomerase (SIS) RU84_00425 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising RU84_00425 IPR029055 Nucleophile aminohydrolases, N-terminal RU84_00430 IPR001451 Bacterial transferase hexapeptide repeat RU84_00430 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase RU84_00430 IPR011004 Trimeric LpxA-like RU84_00430 IPR018357 Hexapeptide transferase, conserved site RU84_00430 IPR025877 MobA-like NTP transferase domain RU84_00430 IPR029044 Nucleotide-diphospho-sugar transferases RU84_00435 IPR007686 YutG/PgpA domain RU84_00435 IPR026037 Phosphatidylglycerophosphatase A RU84_00435 IPR036681 RU84_00435 RU84_00440 IPR006283 Thiamine-monophosphate kinase RU84_00440 IPR010918 AIR synthase-related protein, C-terminal domain RU84_00440 IPR016188 PurM, N-terminal-like RU84_00440 IPR036676 RU84_00440 RU84_00440 IPR036921 RU84_00440 RU84_00445 IPR006027 NusB/RsmB/TIM44 RU84_00445 IPR011605 NusB antitermination factor RU84_00445 IPR035926 RU84_00445 RU84_00450 IPR002180 6,7-dimethyl-8-ribityllumazine synthase RU84_00450 IPR034964 RU84_00450 RU84_00450 IPR036467 RU84_00450 RU84_00455 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB RU84_00455 IPR017945 DHBP synthase RibB-like alpha/beta domain RU84_00455 IPR032677 RU84_00455 RU84_00455 IPR036144 RU84_00455 RU84_00465 IPR023214 HAD-like domain RU84_00465 IPR036412 RU84_00465 RU84_00480 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase RU84_00480 IPR023509 D-Tyr tRNAtyr deacylase-like domain RU84_00485 IPR006406 Nicotinate phosphoribosyltransferase RU84_00485 IPR007229 Nicotinate phosphoribosyltransferase family RU84_00485 IPR036068 RU84_00485 RU84_00490 IPR001307 Thiosulphate sulfurtransferase, conserved site RU84_00490 IPR001763 Rhodanese-like domain RU84_00490 IPR036873 RU84_00490 RU84_00495 IPR003817 Phosphatidylserine decarboxylase-related RU84_00495 IPR033177 RU84_00495 RU84_00495 IPR033178 RU84_00495 RU84_00500 IPR004304 Acetamidase/Formamidase RU84_00515 IPR005152 Lipase, secreted RU84_00515 IPR022742 Putative lysophospholipase RU84_00515 IPR029058 Alpha/Beta hydrolase fold RU84_00520 IPR000014 PAS domain RU84_00520 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_00520 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RU84_00520 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RU84_00520 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR RU84_00520 IPR021766 Protein of unknown function DUF3329 RU84_00520 IPR035965 RU84_00520 RU84_00520 IPR036097 RU84_00520 RU84_00520 IPR036890 RU84_00520 RU84_00525 IPR001789 Signal transduction response regulator, receiver domain RU84_00525 IPR001867 Signal transduction response regulator, C-terminal RU84_00525 IPR011006 CheY-like superfamily RU84_00525 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB RU84_00525 IPR016032 Signal transduction response regulator, C-terminal effector RU84_00525 IPR036388 RU84_00525 RU84_00530 IPR009057 Homeodomain-like RU84_00530 IPR036271 RU84_00530 RU84_00535 IPR002347 Glucose/ribitol dehydrogenase RU84_00535 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_00535 IPR036291 RU84_00535 RU84_00540 IPR002528 Multi antimicrobial extrusion protein RU84_00545 IPR004839 Aminotransferase, class I/classII RU84_00545 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_00545 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_00545 IPR015424 Pyridoxal phosphate-dependent transferase RU84_00550 IPR007383 Protein of unknown function DUF445 RU84_00560 IPR010323 Protein of unknown function DUF924 RU84_00560 IPR011990 Tetratricopeptide-like helical domain RU84_00565 IPR006334 Glutamate--cysteine ligase, monofunctional RU84_00565 IPR007370 Glutamate--cysteine ligase RU84_00565 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RU84_00570 IPR003752 Disulphide bond formation protein DsbB/BdbC RU84_00570 IPR022920 Disulphide bond formation protein DsbB RU84_00570 IPR023380 Disulphide bond formation protein DsbB-like domain RU84_00575 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RU84_00575 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RU84_00575 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal RU84_00575 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain RU84_00575 IPR037026 RU84_00575 RU84_00580 IPR018392 LysM domain RU84_00580 IPR036779 RU84_00580 RU84_00595 IPR009739 Protein of unknown function DUF1311 RU84_00605 IPR012908 GPI inositol-deacylase PGAP1-like RU84_00605 IPR029058 Alpha/Beta hydrolase fold RU84_00610 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA RU84_00610 IPR029058 Alpha/Beta hydrolase fold RU84_00615 IPR001241 DNA topoisomerase, type IIA RU84_00615 IPR002288 DNA gyrase B subunit, C-terminal RU84_00615 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_00615 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative RU84_00615 IPR006171 Toprim domain RU84_00615 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RU84_00615 IPR013759 DNA topoisomerase, type IIA, central domain RU84_00615 IPR013760 DNA topoisomerase, type IIA-like domain RU84_00615 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RU84_00615 IPR018522 DNA topoisomerase, type IIA, conserved site RU84_00615 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_00615 IPR036890 RU84_00615 RU84_00620 IPR007247 Ureidoglycolate hydrolase RU84_00620 IPR011051 RmlC-like cupin domain RU84_00620 IPR024060 Ureidoglycolate hydrolase domain RU84_00625 IPR005164 Allantoicase RU84_00625 IPR008979 Galactose-binding domain-like RU84_00625 IPR015908 Allantoicase domain RU84_00630 IPR002938 Monooxygenase, FAD-binding RU84_00630 IPR036188 RU84_00630 RU84_00635 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like RU84_00635 IPR036777 RU84_00635 RU84_00640 IPR006042 Xanthine/uracil permease RU84_00640 IPR006043 Xanthine/uracil/vitamin C permease RU84_00640 IPR017588 Xanthine permease RU84_00645 IPR000895 Transthyretin/hydroxyisourate hydrolase RU84_00645 IPR014306 Hydroxyisourate hydrolase RU84_00645 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily RU84_00645 IPR023418 Transthyretin, thyroxine binding site RU84_00645 IPR036817 RU84_00645 RU84_00650 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 RU84_00650 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase RU84_00650 IPR036778 RU84_00650 RU84_00655 IPR002509 Polysaccharide deacetylase RU84_00655 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RU84_00655 IPR017625 Putative urate catabolism protein RU84_00660 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein RU84_00660 IPR036567 RU84_00660 RU84_00665 IPR036770 RU84_00665 RU84_00670 IPR025737 MetA-pathway of phenol degradation, putative RU84_00675 IPR003834 Cytochrome c assembly protein, transmembrane domain RU84_00675 IPR013766 Thioredoxin domain RU84_00675 IPR017937 Thioredoxin, conserved site RU84_00675 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RU84_00675 IPR036249 RU84_00675 RU84_00675 IPR036929 RU84_00675 RU84_00680 IPR000160 GGDEF domain RU84_00680 IPR029787 Nucleotide cyclase RU84_00690 IPR019223 Domain of unknown function DUF2147 RU84_00695 IPR006504 Transcriptional regulator Spx/MgsR RU84_00695 IPR006660 Arsenate reductase-like RU84_00695 IPR036249 RU84_00695 RU84_00700 IPR004808 AP endonuclease 1 RU84_00700 IPR005135 Endonuclease/exonuclease/phosphatase RU84_00700 IPR036691 RU84_00700 RU84_00705 IPR000836 Phosphoribosyltransferase domain RU84_00705 IPR004467 Orotate phosphoribosyl transferase domain RU84_00705 IPR023031 Orotate phosphoribosyltransferase RU84_00705 IPR029057 Phosphoribosyltransferase-like RU84_00710 IPR000531 TonB-dependent receptor, beta-barrel RU84_00710 IPR010105 TonB-dependent siderophore receptor RU84_00710 IPR012910 TonB-dependent receptor, plug RU84_00710 IPR036942 RU84_00710 RU84_00710 IPR037066 RU84_00710 RU84_00715 IPR013619 Domain of unknown function DUF1737 RU84_00720 IPR004215 Prokaryotic glutathione synthetase, N-terminal RU84_00720 IPR004218 Prokaryotic glutathione synthetase, ATP-binding RU84_00720 IPR006284 Glutathione synthetase, prokaryotic RU84_00720 IPR013815 ATP-grasp fold, subdomain 1 RU84_00720 IPR016185 Pre-ATP-grasp domain RU84_00725 IPR004276 Glycosyl transferase, family 28 RU84_00725 IPR006009 N-acetylglucosaminyltransferase, MurG RU84_00725 IPR007235 Glycosyl transferase, family 28, C-terminal RU84_00730 IPR000713 Mur ligase, N-terminal RU84_00730 IPR004101 Mur ligase, C-terminal RU84_00730 IPR005758 UDP-N-acetylmuramate-alanine ligase RU84_00730 IPR013221 Mur ligase, central RU84_00730 IPR036565 RU84_00730 RU84_00730 IPR036615 RU84_00730 RU84_00735 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site RU84_00735 IPR005905 D-alanine--D-alanine ligase RU84_00735 IPR011095 D-alanine--D-alanine ligase, C-terminal RU84_00735 IPR011127 D-alanine--D-alanine ligase, N-terminal domain RU84_00735 IPR013815 ATP-grasp fold, subdomain 1 RU84_00735 IPR016185 Pre-ATP-grasp domain RU84_00740 IPR005548 Cell division protein FtsQ/DivIB RU84_00740 IPR013685 Polypeptide-transport-associated, FtsQ-type RU84_00740 IPR026579 Cell division protein FtsQ RU84_00745 IPR003494 SHS2 domain inserted in FtsA RU84_00745 IPR020823 Cell division protein FtsA RU84_00750 IPR000158 Cell division protein FtsZ RU84_00750 IPR003008 Tubulin/FtsZ, GTPase domain RU84_00750 IPR008280 Tubulin/FtsZ, C-terminal RU84_00750 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RU84_00750 IPR020805 Cell division protein FtsZ, conserved site RU84_00750 IPR024757 Cell division protein FtsZ, C-terminal RU84_00750 IPR036525 RU84_00750 RU84_00750 IPR037103 RU84_00750 RU84_00755 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase RU84_00755 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal RU84_00755 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal RU84_00755 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_00760 IPR007922 Protein of unknown function DUF721/UPF0232 RU84_00765 IPR011055 Duplicated hybrid motif RU84_00765 IPR016047 Peptidase M23 RU84_00770 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type RU84_00770 IPR005474 Transketolase, N-terminal RU84_00770 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RU84_00770 IPR029061 Thiamin diphosphate-binding fold RU84_00775 IPR000089 Biotin/lipoyl attachment RU84_00775 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RU84_00775 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RU84_00775 IPR004167 E3 binding RU84_00775 IPR011053 Single hybrid motif RU84_00775 IPR023213 Chloramphenicol acetyltransferase-like domain RU84_00775 IPR036625 RU84_00775 RU84_00785 IPR001727 Uncharacterised protein family UPF0016 RU84_00790 IPR000531 TonB-dependent receptor, beta-barrel RU84_00790 IPR010105 TonB-dependent siderophore receptor RU84_00790 IPR012910 TonB-dependent receptor, plug RU84_00790 IPR036942 RU84_00790 RU84_00790 IPR037066 RU84_00790 RU84_00795 IPR001279 Beta-lactamase-like RU84_00795 IPR036866 RU84_00795 RU84_00800 IPR005358 Putative zinc- or iron-chelating domain containing protein RU84_00805 IPR000644 CBS domain RU84_00805 IPR001093 IMP dehydrogenase/GMP reductase RU84_00805 IPR005990 Inosine-5'-monophosphate dehydrogenase RU84_00805 IPR013785 Aldolase-type TIM barrel RU84_00805 IPR015875 IMP dehydrogenase / GMP reductase, conserved site RU84_00810 IPR005841 Alpha-D-phosphohexomutase superfamily RU84_00810 IPR005843 Alpha-D-phosphohexomutase, C-terminal RU84_00810 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RU84_00810 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RU84_00810 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RU84_00810 IPR006352 Phosphoglucosamine mutase RU84_00810 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RU84_00810 IPR016066 Alpha-D-phosphohexomutase, conserved site RU84_00810 IPR036900 RU84_00810 RU84_00815 IPR000659 Pyridoxamine 5'-phosphate oxidase RU84_00815 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain RU84_00815 IPR012349 FMN-binding split barrel RU84_00815 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal RU84_00815 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site RU84_00820 IPR001667 DDH domain RU84_00820 IPR003156 DHHA1 domain RU84_00820 IPR004610 Bacterial RecJ exonuclease RU84_00820 IPR038763 RU84_00820 RU84_00825 IPR031593 RU84_00825 RU84_00830 IPR000352 Peptide chain release factor class I/class II RU84_00830 IPR004374 Peptide chain release factor 2 RU84_00830 IPR005139 Peptide chain release factor RU84_00835 IPR001845 HTH ArsR-type DNA-binding domain RU84_00835 IPR036388 RU84_00835 RU84_00835 IPR036390 RU84_00835 RU84_00840 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RU84_00840 IPR013785 Aldolase-type TIM barrel RU84_00845 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal RU84_00845 IPR038107 RU84_00845 RU84_00850 IPR006700 Ribosomal RNA small subunit methyltransferase E RU84_00850 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RU84_00850 IPR029028 Alpha/beta knot methyltransferases RU84_00855 IPR006685 Mechanosensitive ion channel MscS RU84_00855 IPR010920 Like-Sm (LSM) domain RU84_00855 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 RU84_00855 IPR011066 Mechanosensitive ion channel MscS, C-terminal RU84_00855 IPR023408 RU84_00855 RU84_00860 IPR008523 Lactobacillus phage LBR48, DUF805 RU84_00865 IPR000873 AMP-dependent synthetase/ligase RU84_00865 IPR011904 Acetate-CoA ligase RU84_00865 IPR020845 AMP-binding, conserved site RU84_00865 IPR025110 AMP-binding enzyme C-terminal domain RU84_00865 IPR032387 RU84_00865 RU84_00870 IPR000868 Isochorismatase-like RU84_00870 IPR036380 RU84_00870 RU84_00875 IPR000485 AsnC-type HTH domain RU84_00875 IPR011008 Dimeric alpha-beta barrel RU84_00875 IPR019888 Transcription regulator AsnC-type RU84_00875 IPR036388 RU84_00875 RU84_00875 IPR036390 RU84_00875 RU84_00880 IPR011251 Luciferase-like domain RU84_00880 IPR024014 Dimethyl sulphone monooxygenase SfnG RU84_00880 IPR036661 RU84_00880 RU84_00885 IPR005025 NADPH-dependent FMN reductase-like RU84_00885 IPR019912 FMN reductase, MsuE-like RU84_00885 IPR029039 Flavoprotein-like RU84_00890 IPR000792 Transcription regulator LuxR, C-terminal RU84_00890 IPR001789 Signal transduction response regulator, receiver domain RU84_00890 IPR011006 CheY-like superfamily RU84_00890 IPR016032 Signal transduction response regulator, C-terminal effector RU84_00900 IPR001789 Signal transduction response regulator, receiver domain RU84_00900 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_00900 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RU84_00900 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RU84_00900 IPR011006 CheY-like superfamily RU84_00900 IPR035965 RU84_00900 RU84_00900 IPR036097 RU84_00900 RU84_00900 IPR036890 RU84_00900 RU84_00900 IPR038377 RU84_00900 RU84_00905 IPR007436 Protein of unknown function DUF485 RU84_00910 IPR001734 Sodium/solute symporter RU84_00910 IPR018212 Sodium/solute symporter, conserved site RU84_00910 IPR038377 RU84_00910 RU84_00915 IPR013099 Two pore domain potassium channel domain RU84_00920 IPR000060 BCCT transporter family RU84_00920 IPR018093 BCCT transporter, conserved site RU84_00925 IPR031593 RU84_00925 RU84_00930 IPR000160 GGDEF domain RU84_00930 IPR029787 Nucleotide cyclase RU84_00935 IPR003439 ABC transporter-like RU84_00935 IPR004602 UvrABC system subunit A RU84_00935 IPR017871 ABC transporter, conserved site RU84_00935 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_00940 IPR001647 DNA-binding HTH domain, TetR-type RU84_00940 IPR009057 Homeodomain-like RU84_00940 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RU84_00940 IPR036271 RU84_00940 RU84_00945 IPR011032 GroES (chaperonin 10)-like RU84_00945 IPR013149 Alcohol dehydrogenase, C-terminal RU84_00945 IPR013154 Alcohol dehydrogenase GroES-like RU84_00945 IPR020843 Polyketide synthase, enoylreductase RU84_00945 IPR036291 RU84_00945 RU84_00950 IPR009732 Protein of unknown function DUF1304 RU84_00955 IPR009707 GlpM RU84_00960 IPR004305 Thiaminase-2/PQQC RU84_00960 IPR016084 Haem oxygenase-like, multi-helical RU84_00960 IPR027574 Thiaminase II RU84_00965 IPR007427 Protein of unknown function DUF475 RU84_00970 IPR011701 Major facilitator superfamily RU84_00970 IPR036259 RU84_00970 RU84_00975 IPR000424 Primosome PriB/single-strand DNA-binding RU84_00975 IPR011344 Single-stranded DNA-binding protein RU84_00975 IPR012340 Nucleic acid-binding, OB-fold RU84_00980 IPR008407 Branched-chain amino acid transport, AzlD RU84_00985 IPR011606 Branched-chain amino acid transport, permease RU84_00990 IPR001387 Cro/C1-type helix-turn-helix domain RU84_00990 IPR010982 Lambda repressor-like, DNA-binding domain RU84_00990 IPR011051 RmlC-like cupin domain RU84_00990 IPR013096 Cupin 2, conserved barrel RU84_00990 IPR014710 RmlC-like jelly roll fold RU84_00995 IPR002293 Amino acid/polyamine transporter I RU84_00995 IPR004840 Amino acid permease, conserved site RU84_00995 IPR004841 Amino acid permease/ SLC12A domain RU84_01000 IPR000524 Transcription regulator HTH, GntR RU84_01000 IPR004839 Aminotransferase, class I/classII RU84_01000 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_01000 IPR015424 Pyridoxal phosphate-dependent transferase RU84_01000 IPR036388 RU84_01000 RU84_01000 IPR036390 RU84_01000 RU84_01005 IPR004632 4-aminobutyrate aminotransferase, bacterial RU84_01005 IPR005814 Aminotransferase class-III RU84_01005 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_01005 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_01005 IPR015424 Pyridoxal phosphate-dependent transferase RU84_01010 IPR010102 Succinate semialdehyde dehydrogenase RU84_01010 IPR015590 Aldehyde dehydrogenase domain RU84_01010 IPR016160 Aldehyde dehydrogenase, cysteine active site RU84_01010 IPR016161 Aldehyde/histidinol dehydrogenase RU84_01010 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_01010 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_01010 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RU84_01015 IPR000847 Transcription regulator HTH, LysR RU84_01015 IPR005119 LysR, substrate-binding RU84_01015 IPR036388 RU84_01015 RU84_01015 IPR036390 RU84_01015 RU84_01020 IPR000868 Isochorismatase-like RU84_01020 IPR036380 RU84_01020 RU84_01030 IPR002937 Amine oxidase RU84_01030 IPR036188 RU84_01030 RU84_01035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_01040 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RU84_01040 IPR011057 Mss4-like RU84_01050 IPR011701 Major facilitator superfamily RU84_01050 IPR036259 RU84_01050 RU84_01055 IPR000847 Transcription regulator HTH, LysR RU84_01055 IPR005119 LysR, substrate-binding RU84_01055 IPR036388 RU84_01055 RU84_01055 IPR036390 RU84_01055 RU84_01060 IPR000620 Drug/metabolite transporter RU84_01065 IPR011990 Tetratricopeptide-like helical domain RU84_01075 IPR023210 NADP-dependent oxidoreductase domain RU84_01075 IPR036812 RU84_01075 RU84_01080 IPR009057 Homeodomain-like RU84_01080 IPR018060 DNA binding HTH domain, AraC-type RU84_01080 IPR020449 Transcription regulator HTH, AraC- type RU84_01085 IPR001647 DNA-binding HTH domain, TetR-type RU84_01085 IPR009057 Homeodomain-like RU84_01095 IPR001584 Integrase, catalytic core RU84_01095 IPR012337 Ribonuclease H-like domain RU84_01095 IPR025246 Transposase IS30-like HTH domain RU84_01095 IPR036397 RU84_01095 RU84_01110 IPR002577 Helix-turn-helix, HxlR type RU84_01110 IPR036388 RU84_01110 RU84_01110 IPR036390 RU84_01110 RU84_01115 IPR003680 Flavodoxin-like fold RU84_01115 IPR029039 Flavoprotein-like RU84_01130 IPR003855 K+ potassium transporter RU84_01130 IPR023051 Potassium uptake protein, low affinity, Kup RU84_01140 IPR001604 DNA/RNA non-specific endonuclease RU84_01140 IPR018524 DNA/RNA non-specific endonuclease, active site RU84_01140 IPR020821 Extracellular Endonuclease, subunit A RU84_01145 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RU84_01155 IPR000425 Major intrinsic protein RU84_01155 IPR022357 Major intrinsic protein, conserved site RU84_01155 IPR023271 Aquaporin-like RU84_01155 IPR023743 Aquaporin Z RU84_01160 IPR009057 Homeodomain-like RU84_01160 IPR018060 DNA binding HTH domain, AraC-type RU84_01160 IPR032687 RU84_01160 RU84_01170 IPR004651 Histidine biosynthesis, HisF RU84_01170 IPR006062 Histidine biosynthesis RU84_01170 IPR011060 Ribulose-phosphate binding barrel RU84_01170 IPR013785 Aldolase-type TIM barrel RU84_01175 IPR002575 Aminoglycoside phosphotransferase RU84_01175 IPR005280 Homoserine kinase ThrB RU84_01175 IPR011009 Protein kinase-like domain RU84_01180 IPR002059 Cold-shock protein, DNA-binding RU84_01180 IPR010718 Protein of unknown function DUF1294 RU84_01180 IPR011129 Cold shock protein RU84_01180 IPR012340 Nucleic acid-binding, OB-fold RU84_01190 IPR000620 Drug/metabolite transporter RU84_01195 IPR001387 Cro/C1-type helix-turn-helix domain RU84_01195 IPR010982 Lambda repressor-like, DNA-binding domain RU84_01195 IPR011051 RmlC-like cupin domain RU84_01195 IPR013096 Cupin 2, conserved barrel RU84_01195 IPR014710 RmlC-like jelly roll fold RU84_01200 IPR006062 Histidine biosynthesis RU84_01200 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA RU84_01200 IPR011060 Ribulose-phosphate binding barrel RU84_01200 IPR013785 Aldolase-type TIM barrel RU84_01200 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase RU84_01205 IPR002562 3'-5' exonuclease domain RU84_01205 IPR012337 Ribonuclease H-like domain RU84_01205 IPR036397 RU84_01205 RU84_01210 IPR008523 Lactobacillus phage LBR48, DUF805 RU84_01215 IPR010139 Imidazole glycerol phosphate synthase, subunit H RU84_01215 IPR017926 Glutamine amidotransferase RU84_01215 IPR029062 Class I glutamine amidotransferase-like RU84_01220 IPR000807 Imidazoleglycerol-phosphate dehydratase RU84_01220 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site RU84_01220 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_01220 IPR038494 RU84_01220 RU84_01225 IPR000182 GNAT domain RU84_01225 IPR016181 Acyl-CoA N-acyltransferase RU84_01240 IPR000182 GNAT domain RU84_01240 IPR016181 Acyl-CoA N-acyltransferase RU84_01245 IPR003702 Acetyl-CoA hydrolase/transferase RU84_01245 IPR017821 Succinate CoA transferase RU84_01245 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain RU84_01245 IPR037171 RU84_01245 RU84_01245 IPR038460 RU84_01245 RU84_01250 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_01250 IPR003660 HAMP linker domain RU84_01250 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RU84_01250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RU84_01250 IPR036097 RU84_01250 RU84_01250 IPR036890 RU84_01250 RU84_01255 IPR001789 Signal transduction response regulator, receiver domain RU84_01255 IPR001867 Signal transduction response regulator, C-terminal RU84_01255 IPR011006 CheY-like superfamily RU84_01255 IPR016032 Signal transduction response regulator, C-terminal effector RU84_01255 IPR036388 RU84_01255 RU84_01260 IPR003029 Ribosomal protein S1, RNA-binding domain RU84_01260 IPR006641 YqgF/RNase H-like domain RU84_01260 IPR010994 RuvA domain 2-like RU84_01260 IPR012337 Ribonuclease H-like domain RU84_01260 IPR012340 Nucleic acid-binding, OB-fold RU84_01260 IPR018974 Tex-like protein, N-terminal RU84_01260 IPR022967 RNA-binding domain, S1 RU84_01260 IPR023319 Tex-like protein, HTH domain RU84_01260 IPR023323 Tex-like domain RU84_01260 IPR032639 RU84_01260 RU84_01260 IPR037027 RU84_01260 RU84_01265 IPR001765 Carbonic anhydrase RU84_01265 IPR011547 Sulphate transporter RU84_01265 IPR036874 RU84_01265 RU84_01270 IPR002347 Glucose/ribitol dehydrogenase RU84_01270 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_01270 IPR036291 RU84_01270 RU84_01275 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RU84_01275 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase RU84_01275 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_01275 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_01275 IPR015424 Pyridoxal phosphate-dependent transferase RU84_01280 IPR003439 ABC transporter-like RU84_01280 IPR003593 AAA+ ATPase domain RU84_01280 IPR017871 ABC transporter, conserved site RU84_01280 IPR022374 ABC transporter, ATP-binding protein, ChvD RU84_01280 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_01280 IPR032781 RU84_01280 RU84_01285 IPR006597 Sel1-like RU84_01285 IPR011990 Tetratricopeptide-like helical domain RU84_01305 IPR007318 Phospholipid methyltransferase RU84_01315 IPR003423 Outer membrane efflux protein RU84_01320 IPR006143 RND efflux pump, membrane fusion protein RU84_01320 IPR032317 RU84_01320 RU84_01325 IPR001036 Acriflavin resistance protein RU84_01325 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA RU84_01325 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RU84_01330 IPR002524 Cation efflux protein RU84_01330 IPR027469 Cation efflux protein transmembrane domain RU84_01330 IPR036837 RU84_01330 RU84_01355 IPR029058 Alpha/Beta hydrolase fold RU84_01360 IPR002293 Amino acid/polyamine transporter I RU84_01360 IPR004840 Amino acid permease, conserved site RU84_01360 IPR004841 Amino acid permease/ SLC12A domain RU84_01375 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RU84_01375 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RU84_01375 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial RU84_01375 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding RU84_01375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_01375 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RU84_01375 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 RU84_01385 IPR005669 Thiosulphate/Sulfate-binding protein RU84_01390 IPR002903 Ribosomal RNA small subunit methyltransferase H RU84_01390 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain RU84_01390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_01395 IPR011922 Cell division protein FtsL RU84_01400 IPR001460 Penicillin-binding protein, transpeptidase RU84_01400 IPR005311 Penicillin-binding protein, dimerisation domain RU84_01400 IPR012338 Beta-lactamase/transpeptidase-like RU84_01400 IPR036138 RU84_01400 RU84_01400 IPR037532 RU84_01400 RU84_01405 IPR004101 Mur ligase, C-terminal RU84_01405 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase RU84_01405 IPR013221 Mur ligase, central RU84_01405 IPR035911 RU84_01405 RU84_01405 IPR036565 RU84_01405 RU84_01405 IPR036615 RU84_01405 RU84_01410 IPR000713 Mur ligase, N-terminal RU84_01410 IPR004101 Mur ligase, C-terminal RU84_01410 IPR005863 UDP-MurNAc-pentapeptide synthetase RU84_01410 IPR013221 Mur ligase, central RU84_01410 IPR035911 RU84_01410 RU84_01410 IPR036565 RU84_01410 RU84_01410 IPR036615 RU84_01410 RU84_01415 IPR000715 Glycosyl transferase, family 4 RU84_01415 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase RU84_01415 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site RU84_01425 IPR013216 Methyltransferase type 11 RU84_01425 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted RU84_01425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_01430 IPR001264 Glycosyl transferase, family 51 RU84_01430 IPR001460 Penicillin-binding protein, transpeptidase RU84_01430 IPR012338 Beta-lactamase/transpeptidase-like RU84_01430 IPR023346 Lysozyme-like domain RU84_01430 IPR031376 RU84_01430 RU84_01430 IPR036950 RU84_01430 RU84_01435 IPR003494 SHS2 domain inserted in FtsA RU84_01435 IPR005883 Type IV pilus assembly protein PilM RU84_01440 IPR007813 Fimbrial assembly PilN RU84_01445 IPR007445 Pilus assembly protein, PilO RU84_01445 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RU84_01450 IPR007446 Pilus assembly protein PilP RU84_01455 IPR001775 GspD/PilQ family RU84_01455 IPR004845 Type II secretion system GspD, conserved site RU84_01455 IPR004846 Type II/III secretion system RU84_01455 IPR005644 NolW-like RU84_01455 IPR011662 Secretin/TonB, short N-terminal RU84_01455 IPR013355 Type IV pilus secretin PilQ RU84_01455 IPR021731 AMIN domain RU84_01460 IPR000623 Shikimate kinase/Threonine synthase-like 1 RU84_01460 IPR023000 Shikimate kinase, conserved site RU84_01460 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_01460 IPR031322 RU84_01460 RU84_01465 IPR016037 3-dehydroquinate synthase AroB RU84_01465 IPR030960 RU84_01465 RU84_01465 IPR030963 RU84_01465 RU84_01470 IPR036680 RU84_01470 RU84_01475 IPR002489 Glutamate synthase, alpha subunit, C-terminal RU84_01475 IPR002932 Glutamate synthase domain RU84_01475 IPR006982 Glutamate synthase, central-N RU84_01475 IPR013785 Aldolase-type TIM barrel RU84_01475 IPR017932 Glutamine amidotransferase type 2 domain RU84_01475 IPR029055 Nucleophile aminohydrolases, N-terminal RU84_01475 IPR036485 RU84_01475 RU84_01480 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 RU84_01480 IPR009051 Alpha-helical ferredoxin RU84_01480 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_01480 IPR028261 Dihydroprymidine dehydrogenase domain II RU84_01480 IPR036188 RU84_01480 RU84_01485 IPR016516 Uncharacterised conserved protein UCP07580 RU84_01490 IPR007156 LemA RU84_01490 IPR023353 LemA-like domain RU84_01495 IPR007621 TPM domain RU84_01500 IPR007621 TPM domain RU84_01505 IPR001082 Fimbrial protein pilin RU84_01505 IPR012902 Prokaryotic N-terminal methylation site RU84_01510 IPR007016 O-antigen ligase-related RU84_01515 IPR007016 O-antigen ligase-related RU84_01515 IPR021797 Protein of unknown function DUF3366 RU84_01515 IPR031726 RU84_01515 RU84_01520 IPR002024 Bacterioferritin RU84_01520 IPR008331 Ferritin/DPS protein domain RU84_01520 IPR009078 Ferritin-like superfamily RU84_01520 IPR012347 Ferritin-related RU84_01525 IPR007419 BFD-like [2Fe-2S]-binding domain RU84_01530 IPR006056 Enamine/imine deaminase YjgF-like RU84_01530 IPR006175 YjgF/Yer057p/UK114 family RU84_01530 IPR019897 YjgF-like protein, conserved site RU84_01530 IPR035959 RU84_01530 RU84_01535 IPR003607 HD/PDEase domain RU84_01535 IPR004095 TGS RU84_01535 IPR007685 RelA/SpoT RU84_01535 IPR012675 Beta-grasp domain RU84_01535 IPR012676 TGS-like RU84_01540 IPR003716 DNA-directed RNA polymerase, omega subunit RU84_01540 IPR006110 RNA polymerase, subunit omega/K/RPB6 RU84_01540 IPR012293 RNA polymerase subunit, RPB6/omega RU84_01540 IPR036161 RU84_01540 RU84_01545 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RU84_01545 IPR017665 Guanylate kinase RU84_01545 IPR020590 Guanylate kinase, conserved site RU84_01545 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_01550 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase RU84_01555 IPR012902 Prokaryotic N-terminal methylation site RU84_01555 IPR022346 General secretion pathway, GspH RU84_01560 IPR012902 Prokaryotic N-terminal methylation site RU84_01560 IPR013362 Pilus modification type IV, PilV RU84_01565 IPR012902 Prokaryotic N-terminal methylation site RU84_01565 IPR032092 RU84_01565 RU84_01575 IPR002035 von Willebrand factor, type A RU84_01575 IPR008707 PilC beta-propeller domain RU84_01575 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily RU84_01575 IPR036465 RU84_01575 RU84_01580 IPR000983 Bacterial general secretion pathway protein G-type pilin RU84_01580 IPR012902 Prokaryotic N-terminal methylation site RU84_01580 IPR031982 RU84_01580 RU84_01585 IPR000983 Bacterial general secretion pathway protein G-type pilin RU84_01585 IPR012902 Prokaryotic N-terminal methylation site RU84_01585 IPR031982 RU84_01585 RU84_01590 IPR000307 Ribosomal protein S16 RU84_01590 IPR020592 Ribosomal protein S16, conserved site RU84_01590 IPR023803 Ribosomal protein S16 domain RU84_01595 IPR002676 RimM protein RU84_01595 IPR009000 Translation protein, beta-barrel domain RU84_01595 IPR011033 PRC-barrel-like RU84_01595 IPR011961 16S rRNA processing protein RimM RU84_01595 IPR027275 PRC-barrel domain RU84_01595 IPR036976 RU84_01595 RU84_01600 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria RU84_01600 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain RU84_01600 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal RU84_01600 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RU84_01600 IPR029028 Alpha/beta knot methyltransferases RU84_01605 IPR001857 Ribosomal protein L19 RU84_01605 IPR008991 Translation protein SH3-like domain RU84_01605 IPR018257 Ribosomal protein L19, conserved site RU84_01605 IPR038657 RU84_01605 RU84_01610 IPR000073 Alpha/beta hydrolase fold-1 RU84_01610 IPR029058 Alpha/Beta hydrolase fold RU84_01615 IPR004961 Lipase chaperone RU84_01620 IPR002501 Pseudouridine synthase II RU84_01620 IPR014780 tRNA pseudouridine synthase II, TruB RU84_01620 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal RU84_01620 IPR020103 Pseudouridine synthase, catalytic domain RU84_01620 IPR032819 RU84_01620 RU84_01625 IPR002781 Transmembrane protein TauE like RU84_01630 IPR012312 Haemerythrin/HHE cation-binding motif RU84_01635 IPR000620 Drug/metabolite transporter RU84_01640 IPR000620 Drug/metabolite transporter RU84_01645 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RU84_01645 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RU84_01645 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RU84_01645 IPR036291 RU84_01645 RU84_01650 IPR004113 FAD-linked oxidase, C-terminal RU84_01650 IPR006094 FAD linked oxidase, N-terminal RU84_01650 IPR016164 FAD-linked oxidase-like, C-terminal RU84_01650 IPR016167 FAD-binding, type 2, subdomain 1 RU84_01650 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RU84_01650 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RU84_01650 IPR036318 RU84_01650 RU84_01660 IPR007138 Antibiotic biosynthesis monooxygenase-like domain RU84_01660 IPR011008 Dimeric alpha-beta barrel RU84_01665 IPR003680 Flavodoxin-like fold RU84_01665 IPR029039 Flavoprotein-like RU84_01675 IPR005829 Sugar transporter, conserved site RU84_01675 IPR011701 Major facilitator superfamily RU84_01675 IPR036259 RU84_01675 RU84_01680 IPR010019 Integral membrane protein, YccS RU84_01680 IPR010020 Integral membrane protein, YccS/YhfK RU84_01680 IPR032692 RU84_01680 RU84_01685 IPR001424 Superoxide dismutase, copper/zinc binding domain RU84_01685 IPR018152 Superoxide dismutase, copper/zinc, binding site RU84_01685 IPR036423 RU84_01685 RU84_01690 IPR002549 Uncharacterised protein family UPF0118 RU84_01695 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RU84_01695 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_01700 IPR019287 Holliday junction resolvase-related domain RU84_01715 IPR013216 Methyltransferase type 11 RU84_01715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_01720 IPR029058 Alpha/Beta hydrolase fold RU84_01725 IPR002293 Amino acid/polyamine transporter I RU84_01725 IPR004840 Amino acid permease, conserved site RU84_01725 IPR004841 Amino acid permease/ SLC12A domain RU84_01730 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase RU84_01730 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal RU84_01730 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain RU84_01730 IPR014362 Glutamate dehydrogenase RU84_01730 IPR033524 RU84_01730 RU84_01730 IPR036291 RU84_01730 RU84_01735 IPR004636 Acetylornithine/Succinylornithine transaminase family RU84_01735 IPR005814 Aminotransferase class-III RU84_01735 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_01735 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_01735 IPR015424 Pyridoxal phosphate-dependent transferase RU84_01735 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria RU84_01740 IPR007041 Arginine N-succinyltransferase Ast/AOST RU84_01740 IPR016181 Acyl-CoA N-acyltransferase RU84_01740 IPR017650 Arginine N-succinyltransferase AstA RU84_01745 IPR015590 Aldehyde dehydrogenase domain RU84_01745 IPR016160 Aldehyde dehydrogenase, cysteine active site RU84_01745 IPR016161 Aldehyde/histidinol dehydrogenase RU84_01745 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_01745 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_01745 IPR017649 Succinylglutamic semialdehyde dehydrogenase RU84_01745 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RU84_01750 IPR007079 Succinylarginine dihydrolase RU84_01750 IPR037031 RU84_01750 RU84_01755 IPR007036 Succinylglutamate desuccinylase/aspartoacylase RU84_01755 IPR016681 Succinylglutamate desuccinylase RU84_01770 IPR000209 Peptidase S8/S53 domain RU84_01770 IPR015500 Peptidase S8, subtilisin-related RU84_01770 IPR023827 Peptidase S8, subtilisin, Asp-active site RU84_01770 IPR023828 Peptidase S8, subtilisin, Ser-active site RU84_01770 IPR036852 RU84_01770 RU84_01785 IPR000847 Transcription regulator HTH, LysR RU84_01785 IPR005119 LysR, substrate-binding RU84_01785 IPR036388 RU84_01785 RU84_01785 IPR036390 RU84_01785 RU84_01790 IPR000620 Drug/metabolite transporter RU84_01795 IPR005545 YCII-related RU84_01795 IPR011008 Dimeric alpha-beta barrel RU84_01805 IPR029787 Nucleotide cyclase RU84_01810 IPR008909 DALR anticodon binding RU84_01810 IPR015944 Glycine-tRNA ligase, beta subunit RU84_01815 IPR002310 Glycine-tRNA ligase, alpha subunit RU84_01820 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG RU84_01820 IPR005829 Sugar transporter, conserved site RU84_01820 IPR011701 Major facilitator superfamily RU84_01820 IPR036259 RU84_01820 RU84_01825 IPR010994 RuvA domain 2-like RU84_01825 IPR013785 Aldolase-type TIM barrel RU84_01825 IPR023874 DNA modification/repair radical SAM protein, putative RU84_01830 IPR023875 DNA metabolism protein, putative RU84_01830 IPR025404 Domain of unknown function DUF4130 RU84_01835 IPR000644 CBS domain RU84_01835 IPR007065 HPP RU84_01840 IPR007168 Phage shock protein, PspC, N-terminal RU84_01850 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_01850 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_01850 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_01850 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_01850 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RU84_01850 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RU84_01850 IPR036250 RU84_01850 RU84_01850 IPR037069 RU84_01850 RU84_01860 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RU84_01860 IPR011342 Shikimate dehydrogenase RU84_01860 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal RU84_01860 IPR022893 Shikimate, quinate/shikimate dehydrogenase RU84_01860 IPR036291 RU84_01860 RU84_01865 IPR001260 Coproporphyrinogen III oxidase, aerobic RU84_01865 IPR018375 Coproporphyrinogen III oxidase, conserved site RU84_01865 IPR036406 RU84_01865 RU84_01870 IPR000926 GTP cyclohydrolase II, RibA RU84_01870 IPR032677 RU84_01870 RU84_01870 IPR036144 RU84_01870 RU84_01875 IPR005475 Transketolase-like, pyrimidine-binding domain RU84_01875 IPR005477 Deoxyxylulose-5-phosphate synthase RU84_01875 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RU84_01875 IPR020826 Transketolase binding site RU84_01875 IPR029061 Thiamin diphosphate-binding fold RU84_01875 IPR033248 RU84_01875 RU84_01880 IPR000760 Inositol monophosphatase RU84_01880 IPR020550 Inositol monophosphatase, conserved site RU84_01880 IPR020583 Inositol monophosphatase, metal-binding site RU84_01885 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RU84_01885 IPR001650 Helicase, C-terminal RU84_01885 IPR011545 DEAD/DEAH box helicase domain RU84_01885 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RU84_01885 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_01895 IPR003439 ABC transporter-like RU84_01895 IPR003593 AAA+ ATPase domain RU84_01895 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_01900 IPR003453 Permease domain RU84_01900 IPR030802 RU84_01900 RU84_01905 IPR003399 Mammalian cell entry-related RU84_01910 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RU84_01915 IPR002645 STAS domain RU84_01915 IPR036513 RU84_01915 RU84_01920 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB RU84_01925 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RU84_01925 IPR031100 RU84_01925 RU84_01930 IPR000086 NUDIX hydrolase domain RU84_01930 IPR015797 NUDIX hydrolase domain-like RU84_01930 IPR020084 NUDIX hydrolase, conserved site RU84_01935 IPR000836 Phosphoribosyltransferase domain RU84_01935 IPR029057 Phosphoribosyltransferase-like RU84_01940 IPR001650 Helicase, C-terminal RU84_01940 IPR004609 ATP-dependent DNA helicase RecG RU84_01940 IPR011545 DEAD/DEAH box helicase domain RU84_01940 IPR012340 Nucleic acid-binding, OB-fold RU84_01940 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RU84_01940 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_01940 IPR033454 RU84_01940 RU84_01945 IPR016040 NAD(P)-binding domain RU84_01945 IPR036291 RU84_01945 RU84_01950 IPR018389 Bacterial extracellular solute-binding protein, family 7 RU84_01950 IPR038404 RU84_01950 RU84_01955 IPR002123 Phospholipid/glycerol acyltransferase RU84_01955 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase RU84_01955 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB RU84_01960 IPR029069 HotDog domain RU84_01965 IPR001991 Sodium:dicarboxylate symporter RU84_01965 IPR036458 RU84_01965 RU84_01970 IPR016516 Uncharacterised conserved protein UCP07580 RU84_01975 IPR006073 GTP binding domain RU84_01975 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC RU84_01975 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_01980 IPR000944 Transcription regulator Rrf2-like RU84_01980 IPR036388 RU84_01980 RU84_01980 IPR036390 RU84_01980 RU84_01985 IPR000971 Globin RU84_01985 IPR009050 Globin-like RU84_01985 IPR012292 Globin, structural domain RU84_01985 IPR017938 Riboflavin synthase-like beta-barrel RU84_01990 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_01990 IPR033186 RU84_01990 RU84_01995 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RU84_01995 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_01995 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_01995 IPR015424 Pyridoxal phosphate-dependent transferase RU84_02000 IPR017926 Glutamine amidotransferase RU84_02000 IPR029062 Class I glutamine amidotransferase-like RU84_02005 IPR001848 Ribosomal protein S10 RU84_02005 IPR018268 Ribosomal protein S10, conserved site RU84_02005 IPR027486 Ribosomal protein S10 domain RU84_02005 IPR036838 RU84_02005 RU84_02010 IPR000597 Ribosomal protein L3 RU84_02010 IPR009000 Translation protein, beta-barrel domain RU84_02010 IPR019926 Ribosomal protein L3, conserved site RU84_02010 IPR019927 Ribosomal protein L3, bacterial/organelle-type RU84_02015 IPR002136 Ribosomal protein L4/L1e RU84_02015 IPR013005 Ribosomal protein L4/L1e, bacterial-type RU84_02015 IPR023574 Ribosomal protein L4 domain RU84_02020 IPR012677 Nucleotide-binding, alpha-beta plait RU84_02020 IPR012678 Ribosomal protein L23/L15e core domain RU84_02020 IPR013025 Ribosomal protein L25/L23 RU84_02025 IPR002171 Ribosomal protein L2 RU84_02025 IPR005880 Ribosomal protein L2, bacterial/organellar-type RU84_02025 IPR008991 Translation protein SH3-like domain RU84_02025 IPR012340 Nucleic acid-binding, OB-fold RU84_02025 IPR014722 Ribosomal protein L2 domain 2 RU84_02025 IPR014726 Ribosomal protein L2, domain 3 RU84_02025 IPR022666 Ribosomal Proteins L2, RNA binding domain RU84_02025 IPR022669 Ribosomal protein L2, C-terminal RU84_02030 IPR002222 Ribosomal protein S19/S15 RU84_02030 IPR005732 Ribosomal protein S19, bacterial-type RU84_02030 IPR020934 Ribosomal protein S19 conserved site RU84_02030 IPR023575 Ribosomal protein S19, superfamily RU84_02035 IPR001063 Ribosomal protein L22/L17 RU84_02035 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type RU84_02035 IPR018260 Ribosomal protein L22/L17, conserved site RU84_02035 IPR036394 RU84_02035 RU84_02040 IPR001351 Ribosomal protein S3, C-terminal RU84_02040 IPR004044 K Homology domain, type 2 RU84_02040 IPR004087 K Homology domain RU84_02040 IPR005704 Ribosomal protein S3, bacterial RU84_02040 IPR009019 K homology domain, prokaryotic type RU84_02040 IPR015946 K homology domain-like, alpha/beta RU84_02040 IPR018280 Ribosomal protein S3, conserved site RU84_02040 IPR036419 RU84_02040 RU84_02045 IPR000114 Ribosomal protein L16 RU84_02045 IPR016180 Ribosomal protein L10e/L16 RU84_02045 IPR020798 Ribosomal protein L16, conserved site RU84_02045 IPR036920 RU84_02045 RU84_02050 IPR001854 Ribosomal protein L29 RU84_02050 IPR036049 RU84_02050 RU84_02055 IPR000266 Ribosomal protein S17 RU84_02055 IPR012340 Nucleic acid-binding, OB-fold RU84_02055 IPR019979 Ribosomal protein S17, conserved site RU84_02055 IPR019984 Ribosomal protein S17, bacterial-type RU84_02060 IPR000218 Ribosomal protein L14b/L23e RU84_02060 IPR005745 Ribosomal protein L14, bacterial-type RU84_02060 IPR019972 Ribosomal protein L14 conserved site RU84_02060 IPR036853 RU84_02060 RU84_02065 IPR003256 Ribosomal protein L24 RU84_02065 IPR005824 KOW RU84_02065 IPR005825 Ribosomal protein L24/L26, conserved site RU84_02065 IPR008991 Translation protein SH3-like domain RU84_02065 IPR014722 Ribosomal protein L2 domain 2 RU84_02070 IPR002132 Ribosomal protein L5 RU84_02070 IPR020929 Ribosomal protein L5, conserved site RU84_02070 IPR020930 Ribosomal protein L5, bacterial-type RU84_02070 IPR022803 Ribosomal protein L5 domain RU84_02070 IPR031309 RU84_02070 RU84_02070 IPR031310 RU84_02070 RU84_02075 IPR001209 Ribosomal protein S14 RU84_02075 IPR018271 Ribosomal protein S14, conserved site RU84_02075 IPR023036 Ribosomal protein S14, bacterial/plastid RU84_02080 IPR000630 Ribosomal protein S8 RU84_02080 IPR035987 RU84_02080 RU84_02085 IPR000702 Ribosomal protein L6 RU84_02085 IPR002358 Ribosomal protein L6, conserved site RU84_02085 IPR019906 Ribosomal protein L6, bacterial-type RU84_02085 IPR020040 Ribosomal protein L6, alpha-beta domain RU84_02085 IPR036789 RU84_02085 RU84_02090 IPR004389 Ribosomal protein L18, bacterial-type RU84_02090 IPR005484 Ribosomal protein L18/L5 RU84_02095 IPR005324 Ribosomal protein S5, C-terminal RU84_02095 IPR005712 Ribosomal protein S5, bacterial-type RU84_02095 IPR013810 Ribosomal protein S5, N-terminal RU84_02095 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RU84_02095 IPR018192 Ribosomal protein S5, N-terminal, conserved site RU84_02095 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_02100 IPR005996 Ribosomal protein L30, bacterial-type RU84_02100 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RU84_02100 IPR036919 RU84_02100 RU84_02105 IPR001196 Ribosomal protein L15, conserved site RU84_02105 IPR005749 Ribosomal protein L15, bacterial-type RU84_02105 IPR021131 Ribosomal protein L18e/L15P RU84_02105 IPR030878 RU84_02105 RU84_02105 IPR036227 RU84_02105 RU84_02110 IPR002208 SecY/SEC61-alpha family RU84_02110 IPR023201 SecY subunit domain RU84_02110 IPR026593 Protein translocase subunit SecY RU84_02110 IPR030659 RU84_02110 RU84_02115 IPR000473 Ribosomal protein L36 RU84_02115 IPR035977 RU84_02115 RU84_02120 IPR001892 Ribosomal protein S13 RU84_02120 IPR010979 Ribosomal protein S13-like, H2TH RU84_02120 IPR018269 Ribosomal protein S13, conserved site RU84_02120 IPR019980 Ribosomal protein S13, bacterial-type RU84_02120 IPR027437 30s ribosomal protein S13, C-terminal RU84_02125 IPR001971 Ribosomal protein S11 RU84_02125 IPR018102 Ribosomal S11, conserved site RU84_02125 IPR019981 Ribosomal protein S11, bacterial-type RU84_02125 IPR036967 RU84_02125 RU84_02130 IPR001912 Ribosomal protein S4/S9, N-terminal RU84_02130 IPR002942 RNA-binding S4 domain RU84_02130 IPR005709 Ribosomal protein S4, bacterial-type RU84_02130 IPR018079 Ribosomal protein S4, conserved site RU84_02130 IPR036986 RU84_02130 RU84_02135 IPR011260 RNA polymerase, alpha subunit, C-terminal RU84_02135 IPR011262 DNA-directed RNA polymerase, insert domain RU84_02135 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type RU84_02135 IPR011773 DNA-directed RNA polymerase, alpha subunit RU84_02135 IPR036603 RU84_02135 RU84_02135 IPR036643 RU84_02135 RU84_02140 IPR000456 Ribosomal protein L17 RU84_02140 IPR036373 RU84_02140 RU84_02145 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RU84_02145 IPR020946 Flavin monooxygenase-like RU84_02145 IPR036188 RU84_02145 RU84_02150 IPR006089 Acyl-CoA dehydrogenase, conserved site RU84_02150 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_02150 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_02150 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_02150 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_02150 IPR036250 RU84_02150 RU84_02150 IPR037069 RU84_02150 RU84_02155 IPR005631 Flavinator of succinate dehydrogenase RU84_02155 IPR036714 RU84_02155 RU84_02170 IPR022764 Peptidase S54, rhomboid domain RU84_02170 IPR023826 Rhomboid-like serine protease, proteobacteria RU84_02170 IPR035952 RU84_02170 RU84_02175 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RU84_02185 IPR012658 Conserved hypothetical protein CHP02443 RU84_02190 IPR001567 Peptidase M3A/M3B RU84_02190 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RU84_02195 IPR001900 RU84_02195 RU84_02195 IPR003029 Ribosomal protein S1, RNA-binding domain RU84_02195 IPR004476 Ribonuclease II/ribonuclease R RU84_02195 IPR011805 Ribonuclease R RU84_02195 IPR012340 Nucleic acid-binding, OB-fold RU84_02195 IPR013223 Ribonuclease B, N-terminal OB domain RU84_02195 IPR022966 Ribonuclease II/R, conserved site RU84_02195 IPR022967 RNA-binding domain, S1 RU84_02215 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial RU84_02215 IPR023214 HAD-like domain RU84_02215 IPR036412 RU84_02215 RU84_02230 IPR000415 Nitroreductase-like RU84_02230 IPR029479 Nitroreductase RU84_02240 IPR011234 Fumarylacetoacetase, C-terminal-related RU84_02240 IPR036663 RU84_02240 RU84_02245 IPR003313 AraC-type arabinose-binding/dimerisation domain RU84_02245 IPR009057 Homeodomain-like RU84_02245 IPR011051 RmlC-like cupin domain RU84_02245 IPR014710 RmlC-like jelly roll fold RU84_02245 IPR018060 DNA binding HTH domain, AraC-type RU84_02245 IPR018062 HTH domain AraC-type, conserved site RU84_02245 IPR020449 Transcription regulator HTH, AraC- type RU84_02250 IPR000620 Drug/metabolite transporter RU84_02255 IPR017039 Virulence factor BrkB RU84_02255 IPR023679 Uncharacterised protein family UPF0761, bacterial RU84_02260 IPR001226 Flavodoxin, conserved site RU84_02260 IPR005025 NADPH-dependent FMN reductase-like RU84_02260 IPR010089 Flavoprotein WrbA RU84_02260 IPR029039 Flavoprotein-like RU84_02265 IPR010079 Xanthine phosphoribosyltransferase RU84_02265 IPR029057 Phosphoribosyltransferase-like RU84_02270 IPR021457 Protein of unknown function DUF3108 RU84_02280 IPR006260 TonB, C-terminal RU84_02280 IPR037682 RU84_02280 RU84_02285 IPR002036 Endoribonuclease YbeY RU84_02285 IPR020549 Endoribonuclease YbeY, conserved site RU84_02285 IPR023091 Metalloprotease catalytic domain, predicted RU84_02290 IPR003714 PhoH-like protein RU84_02290 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_02290 IPR036612 RU84_02290 RU84_02295 IPR002792 TRAM domain RU84_02295 IPR005839 Methylthiotransferase RU84_02295 IPR006463 tRNA-i(6)A37 modification enzyme MiaB RU84_02295 IPR006638 Elongator protein 3/MiaB/NifB RU84_02295 IPR007197 Radical SAM RU84_02295 IPR013848 Methylthiotransferase, N-terminal RU84_02295 IPR020612 Methylthiotransferase, conserved site RU84_02295 IPR023404 Radical SAM, alpha/beta horseshoe RU84_02295 IPR038135 RU84_02295 RU84_02300 IPR008258 Lytic transglycosylase-like SLT domain RU84_02300 IPR008939 Lytic transglycosylase, superhelical U-shaped RU84_02300 IPR023346 Lysozyme-like domain RU84_02305 IPR001568 Ribonuclease T2-like RU84_02305 IPR036430 RU84_02305 RU84_02310 IPR001236 Lactate/malate dehydrogenase, N-terminal RU84_02310 IPR001557 L-lactate/malate dehydrogenase RU84_02310 IPR010945 Malate dehydrogenase, type 2 RU84_02310 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal RU84_02310 IPR022383 Lactate/malate dehydrogenase, C-terminal RU84_02310 IPR036291 RU84_02310 RU84_02315 IPR021250 Protein of unknown function DUF2789 RU84_02325 IPR005123 Oxoglutarate/iron-dependent dioxygenase RU84_02325 IPR006620 Prolyl 4-hydroxylase, alpha subunit RU84_02330 IPR007473 Ribosomal RNA large subunit methyltransferase J RU84_02330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_02335 IPR000462 CDP-alcohol phosphatidyltransferase RU84_02335 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase RU84_02370 IPR011322 Nitrogen regulatory PII-like, alpha/beta RU84_02370 IPR018551 Domain of unknown function DUF2007 RU84_02375 IPR025352 Protein of unknown function DUF4256 RU84_02380 IPR006089 Acyl-CoA dehydrogenase, conserved site RU84_02380 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_02380 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_02380 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_02380 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_02380 IPR036250 RU84_02380 RU84_02380 IPR037069 RU84_02380 RU84_02385 IPR001647 DNA-binding HTH domain, TetR-type RU84_02385 IPR009057 Homeodomain-like RU84_02385 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RU84_02385 IPR036271 RU84_02385 RU84_02390 IPR010839 Protein of unknown function DUF1446 RU84_02395 IPR002347 Glucose/ribitol dehydrogenase RU84_02395 IPR036291 RU84_02395 RU84_02400 IPR029045 ClpP/crotonase-like domain RU84_02400 IPR034733 RU84_02400 RU84_02405 IPR006089 Acyl-CoA dehydrogenase, conserved site RU84_02405 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_02405 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_02405 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_02405 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_02405 IPR036250 RU84_02405 RU84_02405 IPR037069 RU84_02405 RU84_02410 IPR001753 Crotonase superfamily RU84_02410 IPR014748 Crontonase, C-terminal RU84_02410 IPR029045 ClpP/crotonase-like domain RU84_02415 IPR000089 Biotin/lipoyl attachment RU84_02415 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RU84_02415 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RU84_02415 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal RU84_02415 IPR005482 Biotin carboxylase, C-terminal RU84_02415 IPR011053 Single hybrid motif RU84_02415 IPR011054 Rudiment single hybrid motif RU84_02415 IPR016185 Pre-ATP-grasp domain RU84_02420 IPR004942 Dynein light chain-related RU84_02425 IPR001806 Small GTPase superfamily RU84_02425 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_02435 IPR001584 Integrase, catalytic core RU84_02435 IPR012337 Ribonuclease H-like domain RU84_02435 IPR025246 Transposase IS30-like HTH domain RU84_02435 IPR036397 RU84_02435 RU84_02440 IPR001279 Beta-lactamase-like RU84_02440 IPR029228 Alkyl sulfatase dimerisation domain RU84_02440 IPR029229 Alkyl sulfatase, C-terminal RU84_02440 IPR036527 RU84_02440 RU84_02440 IPR036866 RU84_02440 RU84_02440 IPR038536 RU84_02440 RU84_02450 IPR001584 Integrase, catalytic core RU84_02450 IPR012337 Ribonuclease H-like domain RU84_02450 IPR025246 Transposase IS30-like HTH domain RU84_02450 IPR036397 RU84_02450 RU84_02470 IPR007481 Stringent starvation protein B RU84_02470 IPR036760 RU84_02470 RU84_02475 IPR004045 Glutathione S-transferase, N-terminal RU84_02475 IPR036249 RU84_02475 RU84_02475 IPR036282 RU84_02475 RU84_02480 IPR000754 Ribosomal protein S9 RU84_02480 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RU84_02480 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_02480 IPR020574 Ribosomal protein S9, conserved site RU84_02480 IPR023035 Ribosomal protein S9, bacterial/plastid RU84_02485 IPR005822 Ribosomal protein L13 RU84_02485 IPR005823 Ribosomal protein L13, bacterial-type RU84_02485 IPR036899 RU84_02485 RU84_02490 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA RU84_02490 IPR037510 RU84_02490 RU84_02495 IPR001737 Ribosomal RNA adenine methylase transferase RU84_02495 IPR011530 Ribosomal RNA adenine dimethylase RU84_02495 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site RU84_02495 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal RU84_02495 IPR023165 rRNA adenine dimethylase-like RU84_02495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_02500 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) RU84_02500 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RU84_02500 IPR029052 Metallo-dependent phosphatase-like RU84_02505 IPR019223 Domain of unknown function DUF2147 RU84_02510 IPR007300 CidB/LrgB family RU84_02520 IPR006073 GTP binding domain RU84_02520 IPR016496 GTPase HflX RU84_02520 IPR025121 GTPase HflX N-terminal domain RU84_02520 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_02520 IPR032305 RU84_02520 RU84_02525 IPR002123 Phospholipid/glycerol acyltransferase RU84_02530 IPR001736 Phospholipase D/Transphosphatidylase RU84_02530 IPR025202 Phospholipase D-like domain RU84_02535 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RU84_02535 IPR029052 Metallo-dependent phosphatase-like RU84_02540 IPR006664 Outer membrane protein, bacterial RU84_02540 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RU84_02540 IPR006690 Outer membrane protein, OmpA-like, conserved site RU84_02540 IPR036737 RU84_02540 RU84_02545 IPR000160 GGDEF domain RU84_02545 IPR029787 Nucleotide cyclase RU84_02545 IPR033417 RU84_02545 RU84_02550 IPR025293 Protein of unknown function DUF4154 RU84_02580 IPR001100 RU84_02580 RU84_02580 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RU84_02580 IPR016156 FAD/NAD-linked reductase, dimerisation domain RU84_02580 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_02580 IPR036188 RU84_02580 RU84_02585 IPR008964 Invasin/intimin cell-adhesion RU84_02585 IPR013783 Immunoglobulin-like fold RU84_02590 IPR005939 Beta-lactamase hydrolase-like RU84_02590 IPR029021 Protein-tyrosine phosphatase-like RU84_02595 IPR022742 Putative lysophospholipase RU84_02595 IPR029058 Alpha/Beta hydrolase fold RU84_02600 IPR005746 Thioredoxin RU84_02600 IPR013766 Thioredoxin domain RU84_02600 IPR017937 Thioredoxin, conserved site RU84_02600 IPR036249 RU84_02600 RU84_02605 IPR006683 Thioesterase superfamily RU84_02605 IPR029069 HotDog domain RU84_02610 IPR027961 Protein of unknown function DUF4442 RU84_02610 IPR029069 HotDog domain RU84_02615 IPR007551 Protein of unknown function DUF520 RU84_02615 IPR035570 RU84_02615 RU84_02615 IPR035571 RU84_02615 RU84_02615 IPR036183 RU84_02615 RU84_02620 IPR001763 Rhodanese-like domain RU84_02620 IPR036873 RU84_02620 RU84_02625 IPR006076 FAD dependent oxidoreductase RU84_02625 IPR008471 MnmC-like methyltransferase RU84_02625 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal RU84_02625 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC RU84_02625 IPR036188 RU84_02625 RU84_02635 IPR005545 YCII-related RU84_02635 IPR011008 Dimeric alpha-beta barrel RU84_02640 IPR006008 Intracellular septation protein A RU84_02645 IPR003141 Polymerase/histidinol phosphatase, N-terminal RU84_02645 IPR004013 PHP, C-terminal RU84_02645 IPR016195 Polymerase/histidinol phosphatase-like RU84_02650 IPR021134 Bestrophin/UPF0187 RU84_02655 IPR001405 RadC protein RU84_02655 IPR010994 RuvA domain 2-like RU84_02655 IPR025657 RadC-like JAB domain RU84_02660 IPR003382 Flavoprotein RU84_02660 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC RU84_02660 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal RU84_02660 IPR035929 RU84_02660 RU84_02660 IPR036551 RU84_02660 RU84_02665 IPR005665 Protein-export membrane protein SecF, bacterial RU84_02665 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RU84_02665 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RU84_02665 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RU84_02670 IPR001036 Acriflavin resistance protein RU84_02670 IPR005791 Protein translocase subunit SecD RU84_02670 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RU84_02670 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RU84_02670 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RU84_02670 IPR027398 SecD export protein N-terminal TM domain RU84_02675 IPR003849 Preprotein translocase YajC RU84_02680 IPR002616 tRNA-guanine(15) transglycosylase-like RU84_02680 IPR004803 Queuine tRNA-ribosyltransferase RU84_02680 IPR036511 RU84_02680 RU84_02685 IPR007156 LemA RU84_02685 IPR023353 LemA-like domain RU84_02700 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA RU84_02700 IPR036100 RU84_02700 RU84_02710 IPR002104 Integrase, catalytic RU84_02710 IPR010998 Integrase, Lambda-type, N-terminal RU84_02710 IPR011010 DNA breaking-rejoining enzyme, catalytic core RU84_02710 IPR013762 Integrase-like, catalytic core RU84_02725 IPR000424 Primosome PriB/single-strand DNA-binding RU84_02725 IPR011344 Single-stranded DNA-binding protein RU84_02725 IPR012340 Nucleic acid-binding, OB-fold RU84_02740 IPR024252 Protein of unknown function DUF2528 RU84_02765 IPR001387 Cro/C1-type helix-turn-helix domain RU84_02765 IPR010982 Lambda repressor-like, DNA-binding domain RU84_02790 IPR000962 Zinc finger, DksA/TraR C4-type RU84_02795 IPR007684 Zinc finger, Ogr/Delta-type RU84_02805 IPR009734 Myoviridae, GpU RU84_02805 IPR016912 Bacteriophage P2, GpU RU84_02810 IPR010090 Phage tail tape measure protein RU84_02815 IPR019289 Bacteriophage tail protein Gp41, putative RU84_02820 IPR006498 Bacteriophage P2, FII, major tail tube protein RU84_02825 IPR020287 Tail sheath protein, C-terminal domain RU84_02825 IPR035089 RU84_02825 RU84_02840 IPR006521 Tail protein I RU84_02845 IPR006949 Baseplate assembly protein J-like, predicted RU84_02845 IPR014507 Baseplate assembly protein J, predicted RU84_02850 IPR007048 GpW/Gp25/anti-adapter protein IraD RU84_02855 IPR006531 Gp5 N-terminal RU84_02855 IPR013046 Bacteriophage Mu/P2, baseplate assembly RU84_02855 IPR037026 RU84_02855 RU84_02860 IPR006522 Phage virion morphogensis protein RU84_02865 IPR009678 Bacteriophage tail completion protein R RU84_02870 IPR002477 Peptidoglycan binding-like RU84_02870 IPR024408 Domain of unknown function DUF3380 RU84_02870 IPR036365 RU84_02870 RU84_02870 IPR036366 RU84_02870 RU84_02875 IPR008473 Bacteriophage D3, Orf90 RU84_02880 IPR032637 RU84_02880 RU84_02885 IPR008861 Bacteriophage P2, GpX RU84_02885 IPR036779 RU84_02885 RU84_02890 IPR009225 Bacteriophage head completion protein GpL RU84_02895 IPR010270 Bacteriophage P2, GpM RU84_02895 IPR011990 Tetratricopeptide-like helical domain RU84_02895 IPR019734 Tetratricopeptide repeat RU84_02900 IPR006441 Bacteriophage P2, GpN, major capsid RU84_02905 IPR009228 Capsid scaffolding protein GpO RU84_02910 IPR004921 Terminase, large subunit RU84_02910 IPR010332 ATPase terminase subunit, putative RU84_02910 IPR035421 RU84_02910 RU84_02915 IPR006430 Phage portal protein, PBSX family RU84_02915 IPR006944 Bacteriophage/Gene transfer agent portal protein RU84_02915 IPR030935 RU84_02915 RU84_02920 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_02920 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RU84_02920 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RU84_02920 IPR036097 RU84_02920 RU84_02920 IPR036890 RU84_02920 RU84_02925 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain RU84_02925 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase RU84_02925 IPR023057 Glutamate-ammonia-ligase adenylyltransferase RU84_02930 IPR001544 Aminotransferase, class IV RU84_02930 IPR005785 Branched-chain amino acid aminotransferase I RU84_02930 IPR036038 RU84_02930 RU84_02935 IPR009367 Mitochondrial fission protein ELM1-like RU84_02940 IPR002509 Polysaccharide deacetylase RU84_02940 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RU84_02945 IPR001296 Glycosyl transferase, family 1 RU84_02945 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RU84_02950 IPR009367 Mitochondrial fission protein ELM1-like RU84_02955 IPR005888 dTDP-glucose 4,6-dehydratase RU84_02955 IPR016040 NAD(P)-binding domain RU84_02955 IPR036291 RU84_02955 RU84_02960 IPR005913 dTDP-4-dehydrorhamnose reductase RU84_02960 IPR029903 RU84_02960 RU84_02960 IPR036291 RU84_02960 RU84_02965 IPR005835 Nucleotidyl transferase RU84_02965 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form RU84_02965 IPR029044 Nucleotide-diphospho-sugar transferases RU84_02970 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related RU84_02970 IPR011051 RmlC-like cupin domain RU84_02970 IPR014710 RmlC-like jelly roll fold RU84_02975 IPR001173 Glycosyltransferase 2-like RU84_02975 IPR029044 Nucleotide-diphospho-sugar transferases RU84_02980 IPR024542 Domain of unknown function DUF3880 RU84_02990 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb RU84_02990 IPR004115 GAD-like domain RU84_02990 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RU84_02990 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RU84_02990 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type RU84_02990 IPR012340 Nucleic acid-binding, OB-fold RU84_02990 IPR029351 GAD domain RU84_02995 IPR025238 Protein of unknown function DUF4184 RU84_03000 IPR000531 TonB-dependent receptor, beta-barrel RU84_03000 IPR010917 TonB-dependent receptor, conserved site RU84_03000 IPR012910 TonB-dependent receptor, plug RU84_03000 IPR037066 RU84_03000 RU84_03005 IPR025202 Phospholipase D-like domain RU84_03015 IPR024572 Protein of unknown function DUF3315 RU84_03020 IPR009315 Phosphate-starvation-induced PsiE RU84_03020 IPR020948 Phosphate-starvation-induced PsiE-like RU84_03025 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_03025 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_03025 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_03025 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_03025 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RU84_03025 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RU84_03025 IPR036250 RU84_03025 RU84_03025 IPR037069 RU84_03025 RU84_03030 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_03030 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_03030 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_03030 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_03030 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RU84_03030 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RU84_03030 IPR036250 RU84_03030 RU84_03030 IPR037069 RU84_03030 RU84_03040 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_03040 IPR003660 HAMP linker domain RU84_03040 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RU84_03040 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RU84_03040 IPR036097 RU84_03040 RU84_03040 IPR036890 RU84_03040 RU84_03045 IPR001789 Signal transduction response regulator, receiver domain RU84_03045 IPR001867 Signal transduction response regulator, C-terminal RU84_03045 IPR011006 CheY-like superfamily RU84_03045 IPR016032 Signal transduction response regulator, C-terminal effector RU84_03045 IPR036388 RU84_03045 RU84_03050 IPR003846 Uncharacterised protein family UPF0061 RU84_03055 IPR005804 Fatty acid desaturase, type 1 RU84_03055 IPR009160 Delta-9 acyl-CoA desaturase, haem/steroid binding domain-containing RU84_03055 IPR015876 Fatty acid desaturase, type 1, core RU84_03060 IPR005184 Domain of unknown function DUF306, Meta/HslJ RU84_03060 IPR038670 RU84_03060 RU84_03065 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain RU84_03065 IPR030395 RU84_03065 RU84_03070 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like RU84_03070 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type RU84_03070 IPR036451 RU84_03070 RU84_03075 IPR000531 TonB-dependent receptor, beta-barrel RU84_03075 IPR012910 TonB-dependent receptor, plug RU84_03075 IPR036942 RU84_03075 RU84_03075 IPR037066 RU84_03075 RU84_03080 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain RU84_03080 IPR011060 Ribulose-phosphate binding barrel RU84_03080 IPR013785 Aldolase-type TIM barrel RU84_03085 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RU84_03085 IPR006653 Tryptophan synthase, beta chain, conserved site RU84_03085 IPR006654 Tryptophan synthase, beta chain RU84_03085 IPR023026 Tryptophan synthase beta chain/beta chain-like RU84_03085 IPR036052 RU84_03085 RU84_03090 IPR011440 Domain of unknown function DUF1543 RU84_03095 IPR021243 Protein of unknown function DUF2804 RU84_03100 IPR009078 Ferritin-like superfamily RU84_03100 IPR016516 Uncharacterised conserved protein UCP07580 RU84_03105 IPR009057 Homeodomain-like RU84_03105 IPR018060 DNA binding HTH domain, AraC-type RU84_03105 IPR032687 RU84_03105 RU84_03110 IPR002028 Tryptophan synthase, alpha chain RU84_03110 IPR011060 Ribulose-phosphate binding barrel RU84_03110 IPR013785 Aldolase-type TIM barrel RU84_03110 IPR018204 Tryptophan synthase, alpha chain, active site RU84_03115 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit RU84_03115 IPR029045 ClpP/crotonase-like domain RU84_03115 IPR034733 RU84_03115 RU84_03120 IPR001645 Folylpolyglutamate synthetase RU84_03120 IPR004101 Mur ligase, C-terminal RU84_03120 IPR013221 Mur ligase, central RU84_03120 IPR018109 Folylpolyglutamate synthetase, conserved site RU84_03120 IPR036565 RU84_03120 RU84_03120 IPR036615 RU84_03120 RU84_03125 IPR007730 Sporulation-related domain RU84_03125 IPR036680 RU84_03125 RU84_03130 IPR000340 Dual specificity phosphatase, catalytic domain RU84_03130 IPR016130 Protein-tyrosine phosphatase, active site RU84_03130 IPR029021 Protein-tyrosine phosphatase-like RU84_03135 IPR001279 Beta-lactamase-like RU84_03135 IPR036866 RU84_03135 RU84_03140 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RU84_03140 IPR019479 Peroxiredoxin, C-terminal RU84_03140 IPR024706 Peroxiredoxin, AhpC-type RU84_03140 IPR036249 RU84_03140 RU84_03145 IPR000185 Protein translocase subunit SecA RU84_03145 IPR004027 SEC-C motif RU84_03145 IPR011115 SecA DEAD-like, N-terminal RU84_03145 IPR011116 SecA Wing/Scaffold RU84_03145 IPR011130 SecA preprotein, cross-linking domain RU84_03145 IPR020937 SecA conserved site RU84_03145 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_03145 IPR036266 RU84_03145 RU84_03145 IPR036670 RU84_03145 RU84_03155 IPR004736 Citrate-proton symport RU84_03155 IPR005828 General substrate transporter RU84_03155 IPR005829 Sugar transporter, conserved site RU84_03155 IPR036259 RU84_03155 RU84_03160 IPR004254 Hly-III-related RU84_03160 IPR005744 HylII RU84_03165 IPR025714 Methyltransferase domain RU84_03165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_03170 IPR000182 GNAT domain RU84_03170 IPR016181 Acyl-CoA N-acyltransferase RU84_03175 IPR002641 Patatin/Phospholipase A2-related RU84_03175 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RU84_03185 IPR001753 Crotonase superfamily RU84_03185 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RU84_03185 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RU84_03185 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RU84_03185 IPR029045 ClpP/crotonase-like domain RU84_03185 IPR036291 RU84_03185 RU84_03190 IPR002155 Thiolase RU84_03190 IPR016039 Thiolase-like RU84_03190 IPR020610 Thiolase, active site RU84_03190 IPR020613 Thiolase, conserved site RU84_03190 IPR020615 Thiolase, acyl-enzyme intermediate active site RU84_03190 IPR020616 Thiolase, N-terminal RU84_03190 IPR020617 Thiolase, C-terminal RU84_03195 IPR009057 Homeodomain-like RU84_03195 IPR018060 DNA binding HTH domain, AraC-type RU84_03195 IPR020449 Transcription regulator HTH, AraC- type RU84_03195 IPR032687 RU84_03195 RU84_03200 IPR003673 CoA-transferase family III RU84_03200 IPR023606 CoA-transferase family III domain RU84_03205 IPR007049 Carbohydrate-selective porin OprB RU84_03205 IPR038673 RU84_03205 RU84_03210 IPR001479 Quinoprotein dehydrogenase, conserved site RU84_03210 IPR002372 Pyrrolo-quinoline quinone repeat RU84_03210 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily RU84_03210 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related RU84_03210 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RU84_03215 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RU84_03215 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site RU84_03215 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RU84_03215 IPR036136 RU84_03215 RU84_03220 IPR008318 Uncharacterised conserved protein UCP030820 RU84_03225 IPR000390 Small multidrug resistance protein family RU84_03230 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RU84_03230 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RU84_03235 IPR002155 Thiolase RU84_03235 IPR016039 Thiolase-like RU84_03235 IPR020610 Thiolase, active site RU84_03235 IPR020615 Thiolase, acyl-enzyme intermediate active site RU84_03235 IPR020616 Thiolase, N-terminal RU84_03235 IPR020617 Thiolase, C-terminal RU84_03240 IPR012902 Prokaryotic N-terminal methylation site RU84_03240 IPR022346 General secretion pathway, GspH RU84_03245 IPR006664 Outer membrane protein, bacterial RU84_03245 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RU84_03245 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RU84_03245 IPR027385 Outer membrane protein beta-barrel RU84_03245 IPR036737 RU84_03245 RU84_03255 IPR001233 tRNA-splicing ligase, RtcB RU84_03255 IPR036025 RU84_03255 RU84_03260 IPR002293 Amino acid/polyamine transporter I RU84_03260 IPR004840 Amino acid permease, conserved site RU84_03260 IPR004841 Amino acid permease/ SLC12A domain RU84_03265 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RU84_03265 IPR007848 Methyltransferase small domain RU84_03265 IPR013675 Methyltransferase small, N-terminal RU84_03265 IPR023543 rRNA small subunit methyltransferase C RU84_03265 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_03270 IPR006042 Xanthine/uracil permease RU84_03270 IPR006043 Xanthine/uracil/vitamin C permease RU84_03270 IPR017588 Xanthine permease RU84_03275 IPR000640 Translation elongation factor EFG, V domain RU84_03275 IPR000795 Elongation factor, GTP-binding domain RU84_03275 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RU84_03275 IPR005225 Small GTP-binding protein domain RU84_03275 IPR006298 GTP-binding protein TypA RU84_03275 IPR009000 Translation protein, beta-barrel domain RU84_03275 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_03275 IPR035647 RU84_03275 RU84_03280 IPR001185 Large-conductance mechanosensitive channel RU84_03280 IPR019823 Large-conductance mechanosensitive channel, conserved site RU84_03280 IPR036019 RU84_03280 RU84_03280 IPR037673 RU84_03280 RU84_03285 IPR009288 AIG2-like RU84_03285 IPR036568 RU84_03285 RU84_03290 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RU84_03290 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RU84_03295 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase RU84_03295 IPR010979 Ribosomal protein S13-like, H2TH RU84_03295 IPR012319 DNA glycosylase/AP lyase, catalytic domain RU84_03295 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding RU84_03295 IPR020629 Formamidopyrimidine-DNA glycosylase RU84_03295 IPR035937 RU84_03295 RU84_03300 IPR003180 Methylpurine-DNA glycosylase (MPG) RU84_03300 IPR011034 Formyl transferase, C-terminal-like RU84_03300 IPR036995 RU84_03300 RU84_03305 IPR000531 TonB-dependent receptor, beta-barrel RU84_03305 IPR012910 TonB-dependent receptor, plug RU84_03305 IPR036942 RU84_03305 RU84_03305 IPR037066 RU84_03305 RU84_03310 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RU84_03310 IPR013785 Aldolase-type TIM barrel RU84_03315 IPR004776 Auxin efflux carrier RU84_03320 IPR006597 Sel1-like RU84_03320 IPR011990 Tetratricopeptide-like helical domain RU84_03325 IPR009094 Disulphide bond isomerase, DsbC, N-terminal RU84_03325 IPR012336 Thioredoxin-like fold RU84_03325 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RU84_03325 IPR036249 RU84_03325 RU84_03330 IPR006222 Glycine cleavage T-protein, N-terminal RU84_03330 IPR017703 YgfZ/GcvT conserved site RU84_03330 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA RU84_03335 IPR013538 Activator of Hsp90 ATPase homologue 1-like RU84_03335 IPR023393 START-like domain RU84_03340 IPR007438 Protein of unknown function DUF488 RU84_03345 IPR004624 PhnA protein RU84_03345 IPR013987 PhnA protein, N-terminal RU84_03345 IPR013988 PhnA protein, C-terminal RU84_03350 IPR010879 Domain of unknown function DUF1508 RU84_03350 IPR036913 RU84_03350 RU84_03355 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RU84_03355 IPR002316 Proline-tRNA ligase, class IIa RU84_03355 IPR004154 Anticodon-binding RU84_03355 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type RU84_03355 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RU84_03355 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 RU84_03355 IPR036621 RU84_03355 RU84_03355 IPR036754 RU84_03355 RU84_03360 IPR001036 Acriflavin resistance protein RU84_03360 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RU84_03365 IPR006143 RND efflux pump, membrane fusion protein RU84_03365 IPR039562 RU84_03365 RU84_03375 IPR001789 Signal transduction response regulator, receiver domain RU84_03375 IPR011006 CheY-like superfamily RU84_03380 IPR001789 Signal transduction response regulator, receiver domain RU84_03380 IPR011006 CheY-like superfamily RU84_03385 IPR002545 CheW-like protein RU84_03385 IPR036061 RU84_03385 RU84_03390 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RU84_03395 IPR001789 Signal transduction response regulator, receiver domain RU84_03395 IPR002545 CheW-like protein RU84_03395 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_03395 IPR004105 Histidine kinase CheA-like, homodimeric domain RU84_03395 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RU84_03395 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RU84_03395 IPR011006 CheY-like superfamily RU84_03395 IPR036061 RU84_03395 RU84_03395 IPR036641 RU84_03395 RU84_03395 IPR036890 RU84_03395 RU84_03405 IPR006638 Elongator protein 3/MiaB/NifB RU84_03405 IPR007197 Radical SAM RU84_03405 IPR023404 Radical SAM, alpha/beta horseshoe RU84_03410 IPR022742 Putative lysophospholipase RU84_03410 IPR029058 Alpha/Beta hydrolase fold RU84_03415 IPR002933 Peptidase M20 RU84_03415 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria RU84_03415 IPR011650 Peptidase M20, dimerisation domain RU84_03415 IPR036264 RU84_03415 RU84_03420 IPR012556 Entericidin EcnAB RU84_03425 IPR015003 Protein of unknown function DUF1853 RU84_03430 IPR007401 Protein of unknown function DUF454 RU84_03435 IPR005490 L,D-transpeptidase catalytic domain RU84_03435 IPR038063 RU84_03435 RU84_03470 IPR003848 Domain of unknown function DUF218 RU84_03470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_03475 IPR001094 Flavodoxin RU84_03475 IPR001433 Oxidoreductase FAD/NAD(P)-binding RU84_03475 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RU84_03475 IPR005625 PepSY-associated TM helix RU84_03475 IPR008254 Flavodoxin/nitric oxide synthase RU84_03475 IPR017938 Riboflavin synthase-like beta-barrel RU84_03475 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 RU84_03475 IPR029039 Flavoprotein-like RU84_03475 IPR039261 RU84_03475 RU84_03480 IPR025588 YcxB-like protein RU84_03485 IPR010019 Integral membrane protein, YccS RU84_03485 IPR010020 Integral membrane protein, YccS/YhfK RU84_03485 IPR032692 RU84_03485 RU84_03490 IPR004812 Drug resistance transporter Bcr/CmlA subfamily RU84_03490 IPR011701 Major facilitator superfamily RU84_03490 IPR036259 RU84_03490 RU84_03495 IPR000415 Nitroreductase-like RU84_03495 IPR029479 Nitroreductase RU84_03505 IPR001463 Sodium:alanine symporter RU84_03510 IPR002641 Patatin/Phospholipase A2-related RU84_03510 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RU84_03515 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RU84_03515 IPR005789 Threonine dehydratase, catabolic RU84_03515 IPR036052 RU84_03515 RU84_03520 IPR009248 SbmA/BacA-like RU84_03520 IPR036640 RU84_03520 RU84_03525 IPR008753 Peptidase M13, N-terminal domain RU84_03525 IPR018497 Peptidase M13, C-terminal domain RU84_03525 IPR024079 Metallopeptidase, catalytic domain RU84_03530 IPR032322 RU84_03530 RU84_03535 IPR009560 Protein of unknown function DUF1176 RU84_03545 IPR002818 ThiJ/PfpI RU84_03545 IPR006286 Peptidase C56, PfpI RU84_03545 IPR029062 Class I glutamine amidotransferase-like RU84_03550 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related RU84_03550 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit RU84_03550 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic RU84_03550 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RU84_03550 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site RU84_03550 IPR018027 Asn/Gln amidotransferase RU84_03550 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RU84_03555 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RU84_03555 IPR020556 Amidase, conserved site RU84_03555 IPR023631 Amidase signature domain RU84_03555 IPR036928 RU84_03555 RU84_03560 IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit RU84_03560 IPR036113 RU84_03560 RU84_03565 IPR004753 Cell shape determining protein MreB/Mrl RU84_03570 IPR007221 Rod shape-determining protein MreC RU84_03575 IPR007227 Cell shape-determining protein MreD RU84_03580 IPR003697 Maf-like protein RU84_03580 IPR029001 Inosine triphosphate pyrophosphatase-like RU84_03585 IPR003029 Ribosomal protein S1, RNA-binding domain RU84_03585 IPR004659 Ribonuclease E/G RU84_03585 IPR012340 Nucleic acid-binding, OB-fold RU84_03585 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RU84_03585 IPR022967 RNA-binding domain, S1 RU84_03595 IPR004255 O-acyltransferase, WSD1, N-terminal RU84_03595 IPR009721 O-acyltransferase, WSD1, C-terminal RU84_03595 IPR014292 Acyltransferase, WS/DGAT/MGAT RU84_03600 IPR002500 Phosphoadenosine phosphosulphate reductase RU84_03600 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase RU84_03600 IPR011798 Adenosine 5'-phosphosulphate reductase RU84_03600 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_03605 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein RU84_03605 IPR023214 HAD-like domain RU84_03605 IPR036412 RU84_03605 RU84_03610 IPR005017 Membrane protein, aromatic hydrocarbon degradation RU84_03615 IPR003680 Flavodoxin-like fold RU84_03615 IPR029039 Flavoprotein-like RU84_03620 IPR009057 Homeodomain-like RU84_03620 IPR018060 DNA binding HTH domain, AraC-type RU84_03620 IPR020449 Transcription regulator HTH, AraC- type RU84_03620 IPR032687 RU84_03620 RU84_03625 IPR005804 Fatty acid desaturase, type 1 RU84_03630 IPR013225 PaaX-like, C-terminal RU84_03630 IPR036388 RU84_03630 RU84_03635 IPR003824 Undecaprenyl-diphosphatase UppP RU84_03640 IPR009057 Homeodomain-like RU84_03640 IPR009594 Transcription regulator HTH, AraC, N-terminal RU84_03640 IPR018060 DNA binding HTH domain, AraC-type RU84_03640 IPR018062 HTH domain AraC-type, conserved site RU84_03645 IPR011032 GroES (chaperonin 10)-like RU84_03645 IPR013149 Alcohol dehydrogenase, C-terminal RU84_03645 IPR013154 Alcohol dehydrogenase GroES-like RU84_03645 IPR014189 Quinone oxidoreductase PIG3 RU84_03645 IPR020843 Polyketide synthase, enoylreductase RU84_03645 IPR036291 RU84_03645 RU84_03650 IPR002818 ThiJ/PfpI RU84_03650 IPR017283 Molecular chaperone Hsp31 and glyoxalase 3 RU84_03650 IPR029062 Class I glutamine amidotransferase-like RU84_03660 IPR002293 Amino acid/polyamine transporter I RU84_03660 IPR004840 Amino acid permease, conserved site RU84_03660 IPR004841 Amino acid permease/ SLC12A domain RU84_03665 IPR007400 PrpF protein RU84_03665 IPR012709 PrpF, AcnD-accessory RU84_03670 IPR000092 Polyprenyl synthetase RU84_03670 IPR008949 Terpenoid synthase RU84_03670 IPR033749 RU84_03670 RU84_03675 IPR007351 Uncharacterised protein YjbR RU84_03675 IPR038056 RU84_03675 RU84_03680 IPR001107 Band 7 protein RU84_03680 IPR001972 Stomatin family RU84_03680 IPR036013 RU84_03680 RU84_03685 IPR002810 NfeD-like, C-terminal domain RU84_03690 IPR002641 Patatin/Phospholipase A2-related RU84_03690 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RU84_03695 IPR002123 Phospholipid/glycerol acyltransferase RU84_03700 IPR024371 Acetyl-coenzyme A transporter 1 RU84_03700 IPR036259 RU84_03700 RU84_03705 IPR003684 Porin, alpha proteobacteria type RU84_03710 IPR000917 Sulfatase RU84_03710 IPR012549 Domain of unknown function DUF1705 RU84_03710 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RU84_03710 IPR017850 Alkaline-phosphatase-like, core domain RU84_03715 IPR001789 Signal transduction response regulator, receiver domain RU84_03715 IPR001867 Signal transduction response regulator, C-terminal RU84_03715 IPR011006 CheY-like superfamily RU84_03715 IPR036388 RU84_03715 RU84_03720 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_03720 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RU84_03720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RU84_03720 IPR036097 RU84_03720 RU84_03720 IPR036890 RU84_03720 RU84_03725 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RU84_03725 IPR036938 RU84_03725 RU84_03730 IPR018047 Ammonium transporter, conserved site RU84_03730 IPR024041 Ammonium transporter AmtB-like domain RU84_03730 IPR029020 Ammonium/urea transporter RU84_03735 IPR000847 Transcription regulator HTH, LysR RU84_03735 IPR005119 LysR, substrate-binding RU84_03735 IPR036388 RU84_03735 RU84_03735 IPR036390 RU84_03735 RU84_03740 IPR004776 Auxin efflux carrier RU84_03740 IPR038770 RU84_03740 RU84_03745 IPR036869 RU84_03745 RU84_03755 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RU84_03755 IPR002300 Aminoacyl-tRNA synthetase, class Ia RU84_03755 IPR002303 Valine-tRNA ligase RU84_03755 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RU84_03755 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RU84_03755 IPR010978 tRNA-binding arm RU84_03755 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RU84_03755 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_03755 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm RU84_03755 IPR037118 RU84_03755 RU84_03765 IPR002347 Glucose/ribitol dehydrogenase RU84_03765 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_03765 IPR036291 RU84_03765 RU84_03770 IPR032710 RU84_03770 RU84_03770 IPR037401 RU84_03770 RU84_03775 IPR002765 Uncharacterised protein family UPF0145 RU84_03775 IPR035439 RU84_03775 RU84_03780 IPR002765 Uncharacterised protein family UPF0145 RU84_03780 IPR035439 RU84_03780 RU84_03785 IPR003423 Outer membrane efflux protein RU84_03785 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RU84_03790 IPR001036 Acriflavin resistance protein RU84_03790 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 RU84_03790 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RU84_03795 IPR006143 RND efflux pump, membrane fusion protein RU84_03795 IPR032317 RU84_03795 RU84_03800 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RU84_03800 IPR036938 RU84_03800 RU84_03805 IPR011385 Site-specific recombinase Gcr RU84_03810 IPR000092 Polyprenyl synthetase RU84_03810 IPR008949 Terpenoid synthase RU84_03810 IPR033749 RU84_03810 RU84_03820 IPR001787 Ribosomal protein L21 RU84_03820 IPR018258 Ribosomal protein L21, conserved site RU84_03820 IPR028909 Ribosomal protein L21-like RU84_03820 IPR036164 RU84_03820 RU84_03825 IPR001684 Ribosomal protein L27 RU84_03825 IPR018261 Ribosomal protein L27, conserved site RU84_03830 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RU84_03830 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria RU84_03830 IPR029046 Lipoprotein localisation LolA/LolB/LppX RU84_03835 IPR021729 Domain of unknown function DUF3298 RU84_03835 IPR037126 RU84_03835 RU84_03840 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RU84_03840 IPR002317 Serine-tRNA ligase, type1 RU84_03840 IPR010978 tRNA-binding arm RU84_03840 IPR015866 Serine-tRNA synthetase, type1, N-terminal RU84_03845 IPR000878 Tetrapyrrole methylase RU84_03845 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site RU84_03845 IPR006366 Uroporphyrin-III C-methyltransferase RU84_03845 IPR006367 Sirohaem synthase, N-terminal RU84_03845 IPR012409 Sirohaem synthase RU84_03845 IPR014776 Tetrapyrrole methylase, subdomain 2 RU84_03845 IPR014777 Tetrapyrrole methylase, subdomain 1 RU84_03845 IPR019478 Sirohaem synthase, dimerisation domain RU84_03845 IPR035996 RU84_03845 RU84_03845 IPR036291 RU84_03845 RU84_03845 IPR037115 RU84_03845 RU84_03850 IPR001537 tRNA/rRNA methyltransferase, SpoU type RU84_03850 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase RU84_03850 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RU84_03850 IPR029028 Alpha/beta knot methyltransferases RU84_03855 IPR002577 Helix-turn-helix, HxlR type RU84_03855 IPR036388 RU84_03855 RU84_03855 IPR036390 RU84_03855 RU84_03860 IPR026816 Flavodoxin domain RU84_03860 IPR029039 Flavoprotein-like RU84_03865 IPR002293 Amino acid/polyamine transporter I RU84_03865 IPR004841 Amino acid permease/ SLC12A domain RU84_03870 IPR001670 Alcohol dehydrogenase, iron-type RU84_03870 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RU84_03875 IPR036527 RU84_03875 RU84_03880 IPR000544 Octanoyltransferase RU84_03880 IPR004143 Biotin/lipoate A/B protein ligase RU84_03880 IPR020605 Octanoyltransferase, conserved site RU84_03885 IPR007454 Uncharacterised protein family UPF0250 RU84_03885 IPR027471 YbeD-like domain RU84_03890 IPR000943 RNA polymerase sigma-70 RU84_03890 IPR007127 RNA polymerase sigma factor 70, region 1.1 RU84_03890 IPR007624 RNA polymerase sigma-70 region 3 RU84_03890 IPR007627 RNA polymerase sigma-70 region 2 RU84_03890 IPR007630 RNA polymerase sigma-70 region 4 RU84_03890 IPR007631 RNA polymerase sigma factor 70, non-essential domain RU84_03890 IPR009042 RNA polymerase sigma-70 region 1.2 RU84_03890 IPR012760 RNA polymerase sigma factor RpoD, C-terminal RU84_03890 IPR013324 RNA polymerase sigma factor, region 3/4 RU84_03890 IPR013325 RNA polymerase sigma factor, region 2 RU84_03890 IPR014284 RNA polymerase sigma-70 like domain RU84_03890 IPR028630 RNA polymerase sigma factor RpoD RU84_03890 IPR036388 RU84_03890 RU84_03900 IPR011978 Uncharacterised protein family UPF0149 RU84_03900 IPR036255 RU84_03900 RU84_03905 IPR001763 Rhodanese-like domain RU84_03905 IPR020936 Uncharacterised protein family UPF0176 RU84_03905 IPR036873 RU84_03905 RU84_03910 IPR010710 Protein of unknown function DUF1289 RU84_03915 IPR002020 Citrate synthase-like RU84_03915 IPR010953 Citrate synthase, type I RU84_03915 IPR016142 Citrate synthase-like, large alpha subdomain RU84_03915 IPR016143 Citrate synthase-like, small alpha subdomain RU84_03915 IPR019810 Citrate synthase active site RU84_03915 IPR024176 Citrate synthase, bacterial-type RU84_03915 IPR036969 RU84_03915 RU84_03920 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit RU84_03920 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit RU84_03920 IPR034804 RU84_03920 RU84_03925 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit RU84_03925 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor RU84_03925 IPR034804 RU84_03925 RU84_03930 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site RU84_03930 IPR003953 FAD binding domain RU84_03930 IPR011281 Succinate dehydrogenase, flavoprotein subunit RU84_03930 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit RU84_03930 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RU84_03930 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RU84_03930 IPR036188 RU84_03930 RU84_03930 IPR037099 RU84_03930 RU84_03935 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein RU84_03935 IPR009051 Alpha-helical ferredoxin RU84_03935 IPR012675 Beta-grasp domain RU84_03935 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RU84_03935 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal RU84_03935 IPR036010 RU84_03935 RU84_03940 IPR001017 Dehydrogenase, E1 component RU84_03940 IPR005475 Transketolase-like, pyrimidine-binding domain RU84_03940 IPR011603 2-oxoglutarate dehydrogenase E1 component RU84_03940 IPR029061 Thiamin diphosphate-binding fold RU84_03940 IPR031717 RU84_03940 RU84_03940 IPR032106 RU84_03940 RU84_03945 IPR000089 Biotin/lipoyl attachment RU84_03945 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RU84_03945 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RU84_03945 IPR004167 E3 binding RU84_03945 IPR006255 Dihydrolipoamide succinyltransferase RU84_03945 IPR011053 Single hybrid motif RU84_03945 IPR023213 Chloramphenicol acetyltransferase-like domain RU84_03945 IPR036625 RU84_03945 RU84_03950 IPR001100 RU84_03950 RU84_03950 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RU84_03950 IPR006258 Dihydrolipoamide dehydrogenase RU84_03950 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RU84_03950 IPR016156 FAD/NAD-linked reductase, dimerisation domain RU84_03950 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_03950 IPR036188 RU84_03950 RU84_03955 IPR005809 Succinyl-CoA synthetase, beta subunit RU84_03955 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RU84_03955 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type RU84_03955 IPR013815 ATP-grasp fold, subdomain 1 RU84_03955 IPR016102 Succinyl-CoA synthetase-like RU84_03955 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site RU84_03960 IPR003781 CoA-binding RU84_03960 IPR005810 Succinyl-CoA ligase, alpha subunit RU84_03960 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RU84_03960 IPR016102 Succinyl-CoA synthetase-like RU84_03960 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RU84_03960 IPR033847 RU84_03960 RU84_03960 IPR036291 RU84_03960 RU84_03965 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RU84_03965 IPR002305 Aminoacyl-tRNA synthetase, class Ic RU84_03965 IPR002306 Tryptophan-tRNA ligase RU84_03965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_03970 IPR008526 Inner membrane protein YedI RU84_03975 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RU84_03980 IPR006153 Cation/H+ exchanger RU84_03980 IPR038770 RU84_03980 RU84_03990 IPR008928 Six-hairpin glycosidase-like RU84_03990 IPR012341 Six-hairpin glycosidase RU84_03995 IPR019079 Capsule synthesis protein, CapA RU84_04005 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RU84_04005 IPR036217 RU84_04005 RU84_04005 IPR036388 RU84_04005 RU84_04010 IPR006015 Universal stress protein A RU84_04010 IPR006016 UspA RU84_04010 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_04015 IPR001451 Bacterial transferase hexapeptide repeat RU84_04015 IPR011004 Trimeric LpxA-like RU84_04015 IPR018357 Hexapeptide transferase, conserved site RU84_04020 IPR006175 YjgF/Yer057p/UK114 family RU84_04020 IPR035959 RU84_04020 RU84_04025 IPR001647 DNA-binding HTH domain, TetR-type RU84_04025 IPR009057 Homeodomain-like RU84_04025 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RU84_04030 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RU84_04030 IPR006359 Transcription elongation factor GreA RU84_04030 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RU84_04030 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RU84_04030 IPR023459 Transcription elongation factor GreA/GreB family RU84_04030 IPR028624 Transcription elongation factor GreA/GreB RU84_04030 IPR036805 RU84_04030 RU84_04030 IPR036953 RU84_04030 RU84_04035 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RU84_04035 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain RU84_04035 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain RU84_04035 IPR006275 Carbamoyl-phosphate synthase, large subunit RU84_04035 IPR011607 Methylglyoxal synthase-like domain RU84_04035 IPR016185 Pre-ATP-grasp domain RU84_04035 IPR036897 RU84_04035 RU84_04035 IPR036914 RU84_04035 RU84_04040 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain RU84_04040 IPR006274 Carbamoyl-phosphate synthase, small subunit RU84_04040 IPR017926 Glutamine amidotransferase RU84_04040 IPR029062 Class I glutamine amidotransferase-like RU84_04040 IPR036480 RU84_04040 RU84_04055 IPR001890 RNA-binding, CRM domain RU84_04055 IPR017924 RNA-binding protein YhbY RU84_04055 IPR035920 RU84_04055 RU84_04060 IPR002877 Ribosomal RNA methyltransferase FtsJ domain RU84_04060 IPR015507 Ribosomal RNA large subunit methyltransferase E RU84_04060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_04065 IPR000642 Peptidase M41 RU84_04065 IPR003593 AAA+ ATPase domain RU84_04065 IPR003959 ATPase, AAA-type, core RU84_04065 IPR003960 ATPase, AAA-type, conserved site RU84_04065 IPR005936 Peptidase, FtsH RU84_04065 IPR011546 Peptidase M41, FtsH extracellular RU84_04065 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_04065 IPR037219 RU84_04065 RU84_04070 IPR000489 Pterin-binding RU84_04070 IPR006390 Dihydropteroate synthase RU84_04070 IPR011005 Dihydropteroate synthase-like RU84_04080 IPR036185 RU84_04080 RU84_04090 IPR008963 Purple acid phosphatase-like, N-terminal RU84_04090 IPR018946 Alkaline phosphatase D-related RU84_04090 IPR032093 RU84_04090 RU84_04105 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase RU84_04105 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RU84_04105 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RU84_04105 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site RU84_04105 IPR036291 RU84_04105 RU84_04110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_04120 IPR005828 General substrate transporter RU84_04120 IPR005829 Sugar transporter, conserved site RU84_04120 IPR036259 RU84_04120 RU84_04125 IPR000577 RU84_04125 RU84_04125 IPR005999 Glycerol kinase RU84_04125 IPR018483 Carbohydrate kinase, FGGY, conserved site RU84_04125 IPR018484 Carbohydrate kinase, FGGY, N-terminal RU84_04125 IPR018485 Carbohydrate kinase, FGGY, C-terminal RU84_04130 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase RU84_04130 IPR006076 FAD dependent oxidoreductase RU84_04130 IPR031656 RU84_04130 RU84_04130 IPR036188 RU84_04130 RU84_04130 IPR038299 RU84_04130 RU84_04135 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising RU84_04135 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal RU84_04135 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal RU84_04135 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site RU84_04135 IPR035077 RU84_04135 RU84_04135 IPR035078 RU84_04135 RU84_04140 IPR001206 Diacylglycerol kinase, catalytic domain RU84_04140 IPR016064 ATP-NAD kinase-like domain RU84_04140 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 RU84_04145 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RU84_04145 IPR029052 Metallo-dependent phosphatase-like RU84_04150 IPR011049 Serralysin-like metalloprotease, C-terminal RU84_04150 IPR013783 Immunoglobulin-like fold RU84_04150 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass RU84_04150 IPR022038 Bacterial Ig-like domain RU84_04155 IPR011032 GroES (chaperonin 10)-like RU84_04155 IPR018369 Chaperonin Cpn10, conserved site RU84_04155 IPR020818 Chaperonin Cpn10 RU84_04155 IPR037124 RU84_04155 RU84_04160 IPR001844 Chaperonin Cpn60 RU84_04160 IPR002423 Chaperonin Cpn60/TCP-1 RU84_04160 IPR018370 Chaperonin Cpn60, conserved site RU84_04160 IPR027409 GroEL-like apical domain RU84_04160 IPR027410 TCP-1-like chaperonin intermediate domain RU84_04160 IPR027413 GroEL-like equatorial domain RU84_04165 IPR000829 Diacylglycerol kinase, prokaryotic RU84_04165 IPR036945 RU84_04165 RU84_04170 IPR001279 Beta-lactamase-like RU84_04170 IPR036866 RU84_04170 RU84_04175 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain RU84_04175 IPR030395 RU84_04175 RU84_04180 IPR001036 Acriflavin resistance protein RU84_04180 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 RU84_04180 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RU84_04185 IPR025187 Protein of unknown function DUF4112 RU84_04190 IPR001915 Peptidase M48 RU84_04190 IPR022919 Peptidase M48, protease HtpX, putative RU84_04195 IPR008258 Lytic transglycosylase-like SLT domain RU84_04195 IPR023346 Lysozyme-like domain RU84_04200 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase RU84_04200 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA RU84_04200 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_04200 IPR035107 RU84_04200 RU84_04205 IPR003033 SCP2 sterol-binding domain RU84_04205 IPR036527 RU84_04205 RU84_04210 IPR000189 Prokaryotic transglycosylase, active site RU84_04210 IPR001638 Extracellular solute-binding protein, family 3 RU84_04210 IPR008258 Lytic transglycosylase-like SLT domain RU84_04210 IPR023346 Lysozyme-like domain RU84_04215 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RU84_04215 IPR006358 Transcription elongation factor GreB RU84_04215 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RU84_04215 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RU84_04215 IPR023459 Transcription elongation factor GreA/GreB family RU84_04215 IPR028624 Transcription elongation factor GreA/GreB RU84_04215 IPR036805 RU84_04215 RU84_04215 IPR036953 RU84_04215 RU84_04225 IPR011944 Steroid delta5-4-isomerase RU84_04225 IPR027843 Domain of unknown function DUF4440 RU84_04225 IPR032710 RU84_04225 RU84_04230 IPR001584 Integrase, catalytic core RU84_04230 IPR012337 Ribonuclease H-like domain RU84_04230 IPR025246 Transposase IS30-like HTH domain RU84_04230 IPR036397 RU84_04230 RU84_04235 IPR000873 AMP-dependent synthetase/ligase RU84_04235 IPR009081 Acyl carrier protein-like RU84_04235 IPR010071 Amino acid adenylation domain RU84_04235 IPR011004 Trimeric LpxA-like RU84_04235 IPR012728 Non-ribosomal peptide synthetase C-terminal RU84_04235 IPR020845 AMP-binding, conserved site RU84_04235 IPR025110 AMP-binding enzyme C-terminal domain RU84_04235 IPR036736 RU84_04235 RU84_04250 IPR016181 Acyl-CoA N-acyltransferase RU84_04255 IPR018654 Protein of unknown function DUF2084 RU84_04260 IPR001647 DNA-binding HTH domain, TetR-type RU84_04260 IPR009057 Homeodomain-like RU84_04265 IPR016516 Uncharacterised conserved protein UCP07580 RU84_04270 IPR001647 DNA-binding HTH domain, TetR-type RU84_04270 IPR009057 Homeodomain-like RU84_04270 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RU84_04275 IPR000415 Nitroreductase-like RU84_04275 IPR029479 Nitroreductase RU84_04280 IPR002347 Glucose/ribitol dehydrogenase RU84_04280 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_04280 IPR036291 RU84_04280 RU84_04285 IPR001647 DNA-binding HTH domain, TetR-type RU84_04285 IPR009057 Homeodomain-like RU84_04285 IPR036271 RU84_04285 RU84_04290 IPR004381 Glycerate kinase RU84_04290 IPR018193 Glycerate kinase, flavodoxin-like domain RU84_04290 IPR018197 Glycerate kinase, restriction-enzyme-like fold RU84_04290 IPR036129 RU84_04290 RU84_04295 IPR006656 Molybdopterin oxidoreductase RU84_04295 IPR006657 Molydopterin dinucleotide-binding domain RU84_04295 IPR009010 Aspartate decarboxylase-like domain RU84_04295 IPR010046 Oxidoreductase alpha (molybdopterin) subunit RU84_04300 IPR003786 Protein FdhD RU84_04300 IPR016193 Cytidine deaminase-like RU84_04305 IPR010652 Protein of unknown function DUF1232 RU84_04310 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RU84_04310 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RU84_04310 IPR020921 Erythronate-4-phosphate dehydrogenase RU84_04310 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain RU84_04310 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RU84_04310 IPR036291 RU84_04310 RU84_04310 IPR038251 RU84_04310 RU84_04315 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RU84_04315 IPR004525 Elongation factor P--(R)-beta-lysine ligase RU84_04315 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal RU84_04320 IPR007379 Tim44-like domain RU84_04320 IPR032710 RU84_04320 RU84_04325 IPR003593 AAA+ ATPase domain RU84_04325 IPR004504 DNA repair protein RadA RU84_04325 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RU84_04325 IPR014774 Circadian clock protein KaiC/DNA repair protein RadA RU84_04325 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_04325 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_04330 IPR002293 Amino acid/polyamine transporter I RU84_04330 IPR004840 Amino acid permease, conserved site RU84_04330 IPR004841 Amino acid permease/ SLC12A domain RU84_04340 IPR000183 Ornithine/DAP/Arg decarboxylase RU84_04340 IPR002986 Diaminopimelate decarboxylase, LysA RU84_04340 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RU84_04340 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RU84_04340 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RU84_04340 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site RU84_04340 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RU84_04340 IPR029066 PLP-binding barrel RU84_04345 IPR001653 Diaminopimelate epimerase, DapF RU84_04345 IPR018510 Diaminopimelate epimerase, active site RU84_04350 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RU84_04355 IPR002104 Integrase, catalytic RU84_04355 IPR004107 Integrase, SAM-like, N-terminal RU84_04355 IPR010998 Integrase, Lambda-type, N-terminal RU84_04355 IPR011010 DNA breaking-rejoining enzyme, catalytic core RU84_04355 IPR013762 Integrase-like, catalytic core RU84_04355 IPR023009 Tyrosine recombinase XerC/XerD RU84_04360 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site RU84_04360 IPR012255 Electron transfer flavoprotein, beta subunit RU84_04360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_04360 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal RU84_04365 IPR001308 Electron transfer flavoprotein, alpha subunit RU84_04365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_04365 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal RU84_04365 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal RU84_04365 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site RU84_04365 IPR029035 DHS-like NAD/FAD-binding domain RU84_04370 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RU84_04370 IPR005743 DNA gyrase, subunit A RU84_04370 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel RU84_04370 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain RU84_04370 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RU84_04370 IPR013760 DNA topoisomerase, type IIA-like domain RU84_04370 IPR035516 RU84_04370 RU84_04375 IPR038731 RU84_04375 RU84_04380 IPR007267 GtrA-like protein RU84_04385 IPR001173 Glycosyltransferase 2-like RU84_04385 IPR029044 Nucleotide-diphospho-sugar transferases RU84_04390 IPR006879 Uncharacterised protein family UPF0249/HpnK RU84_04390 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RU84_04405 IPR032317 RU84_04405 RU84_04410 IPR003423 Outer membrane efflux protein RU84_04415 IPR000192 Aminotransferase class V domain RU84_04415 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_04415 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_04415 IPR015424 Pyridoxal phosphate-dependent transferase RU84_04415 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site RU84_04415 IPR022278 Phosphoserine aminotransferase RU84_04425 IPR003791 Protein of unknown function UPF0178 RU84_04435 IPR003838 Permease FtsX-like RU84_04435 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family RU84_04435 IPR025857 MacB-like periplasmic core domain RU84_04440 IPR003439 ABC transporter-like RU84_04440 IPR003593 AAA+ ATPase domain RU84_04440 IPR011924 Lipoprotein releasing system, ATP-binding protein RU84_04440 IPR017871 ABC transporter, conserved site RU84_04440 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_04450 IPR001584 Integrase, catalytic core RU84_04450 IPR012337 Ribonuclease H-like domain RU84_04450 IPR025246 Transposase IS30-like HTH domain RU84_04450 IPR036397 RU84_04450 RU84_04455 IPR001279 Beta-lactamase-like RU84_04455 IPR036866 RU84_04455 RU84_04460 IPR004960 Bacterial lipid A biosynthesis acyltransferase RU84_04465 IPR002142 Peptidase S49 RU84_04465 IPR004635 Peptidase S49, SppA RU84_04465 IPR029045 ClpP/crotonase-like domain RU84_04470 IPR000073 Alpha/beta hydrolase fold-1 RU84_04470 IPR029058 Alpha/Beta hydrolase fold RU84_04475 IPR002376 Formyl transferase, N-terminal RU84_04475 IPR004607 Phosphoribosylglycinamide formyltransferase RU84_04475 IPR036477 RU84_04475 RU84_04480 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase RU84_04480 IPR010918 AIR synthase-related protein, C-terminal domain RU84_04480 IPR016188 PurM, N-terminal-like RU84_04480 IPR036676 RU84_04480 RU84_04480 IPR036921 RU84_04480 RU84_04485 IPR002549 Uncharacterised protein family UPF0118 RU84_04490 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) RU84_04490 IPR017788 DnaA regulatory inactivator Hda RU84_04490 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_04495 IPR011050 Pectin lyase fold/virulence factor RU84_04495 IPR026454 Rhombotarget A RU84_04495 IPR026457 CSLREA domain RU84_04505 IPR001584 Integrase, catalytic core RU84_04505 IPR012337 Ribonuclease H-like domain RU84_04505 IPR025246 Transposase IS30-like HTH domain RU84_04505 IPR036397 RU84_04505 RU84_04510 IPR020008 GlyGly-CTERM domain RU84_04515 IPR021455 Protein of unknown function DUF3106 RU84_04525 IPR007627 RNA polymerase sigma-70 region 2 RU84_04525 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RU84_04525 IPR013324 RNA polymerase sigma factor, region 3/4 RU84_04525 IPR013325 RNA polymerase sigma factor, region 2 RU84_04525 IPR014284 RNA polymerase sigma-70 like domain RU84_04525 IPR036388 RU84_04525 RU84_04530 IPR001537 tRNA/rRNA methyltransferase, SpoU type RU84_04530 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RU84_04530 IPR029028 Alpha/beta knot methyltransferases RU84_04530 IPR029064 50S ribosomal protein L30e-like RU84_04535 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase RU84_04535 IPR028343 Fructose-1,6-bisphosphatase RU84_04535 IPR033391 RU84_04535 RU84_04545 IPR006664 Outer membrane protein, bacterial RU84_04545 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RU84_04545 IPR006690 Outer membrane protein, OmpA-like, conserved site RU84_04545 IPR014169 Peptidoglycan-associated lipoprotein RU84_04545 IPR036737 RU84_04545 RU84_04545 IPR039001 RU84_04545 RU84_04550 IPR007195 TolB, N-terminal RU84_04550 IPR011042 Six-bladed beta-propeller, TolB-like RU84_04550 IPR011659 WD40-like Beta Propeller RU84_04550 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB RU84_04550 IPR036752 RU84_04550 RU84_04555 IPR006260 TonB, C-terminal RU84_04555 IPR014161 Tol-Pal system, TolA RU84_04560 IPR003400 Biopolymer transport protein ExbD/TolR RU84_04560 IPR014168 Biopolymer transport, TolR RU84_04565 IPR002898 MotA/TolQ/ExbB proton channel RU84_04565 IPR014163 Tol-Pal system, TolQ RU84_04570 IPR006683 Thioesterase superfamily RU84_04570 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family RU84_04570 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase RU84_04570 IPR029069 HotDog domain RU84_04575 IPR002933 Peptidase M20 RU84_04575 IPR011650 Peptidase M20, dimerisation domain RU84_04575 IPR017439 Amidohydrolase RU84_04575 IPR036264 RU84_04575 RU84_04580 IPR003593 AAA+ ATPase domain RU84_04580 IPR004605 DNA helicase, Holliday junction RuvB type RU84_04580 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal RU84_04580 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal RU84_04580 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_04580 IPR036388 RU84_04580 RU84_04580 IPR036390 RU84_04580 RU84_04585 IPR000085 Bacterial DNA recombination protein RuvA RU84_04585 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RU84_04585 IPR010994 RuvA domain 2-like RU84_04585 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal RU84_04585 IPR012340 Nucleic acid-binding, OB-fold RU84_04585 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial RU84_04585 IPR036267 RU84_04585 RU84_04590 IPR003607 HD/PDEase domain RU84_04590 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase RU84_04590 IPR006674 HD domain RU84_04590 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain RU84_04590 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain RU84_04595 IPR010073 Phosphoribosylformylglycinamidine synthase RU84_04595 IPR010918 AIR synthase-related protein, C-terminal domain RU84_04595 IPR029062 Class I glutamine amidotransferase-like RU84_04595 IPR036604 RU84_04595 RU84_04595 IPR036676 RU84_04595 RU84_04595 IPR036921 RU84_04595 RU84_04600 IPR004812 Drug resistance transporter Bcr/CmlA subfamily RU84_04600 IPR005829 Sugar transporter, conserved site RU84_04600 IPR011701 Major facilitator superfamily RU84_04600 IPR036259 RU84_04600 RU84_04610 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RU84_04610 IPR036069 RU84_04610 RU84_04615 IPR001753 Crotonase superfamily RU84_04615 IPR014748 Crontonase, C-terminal RU84_04615 IPR029045 ClpP/crotonase-like domain RU84_04620 IPR004821 Cytidyltransferase-like domain RU84_04620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_04625 IPR014044 CAP domain RU84_04625 IPR035940 RU84_04625 RU84_04630 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RU84_04630 IPR024706 Peroxiredoxin, AhpC-type RU84_04630 IPR036249 RU84_04630 RU84_04635 IPR002761 DUF71 domain RU84_04635 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_04645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_04645 IPR018317 Queuosine biosynthesis protein QueC RU84_04650 IPR007197 Radical SAM RU84_04650 IPR013785 Aldolase-type TIM barrel RU84_04650 IPR024924 7-carboxy-7-deazaguanine synthase-like RU84_04650 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE RU84_04655 IPR001451 Bacterial transferase hexapeptide repeat RU84_04655 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family RU84_04655 IPR011004 Trimeric LpxA-like RU84_04655 IPR018357 Hexapeptide transferase, conserved site RU84_04655 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 RU84_04655 IPR037133 RU84_04655 RU84_04660 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RU84_04665 IPR000847 Transcription regulator HTH, LysR RU84_04665 IPR005119 LysR, substrate-binding RU84_04665 IPR036388 RU84_04665 RU84_04665 IPR036390 RU84_04665 RU84_04670 IPR003439 ABC transporter-like RU84_04670 IPR003593 AAA+ ATPase domain RU84_04670 IPR005666 Sulphate transport system permease protein 1 RU84_04670 IPR008995 Molybdate/tungstate binding, C-terminal RU84_04670 IPR017871 ABC transporter, conserved site RU84_04670 IPR024765 TOBE-like domain RU84_04670 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_04675 IPR000515 MetI-like domain RU84_04675 IPR005667 Sulphate ABC transporter permease protein 2 RU84_04675 IPR011866 Sulphate ABC transporter, permease protein CysW RU84_04675 IPR035906 RU84_04675 RU84_04680 IPR000515 MetI-like domain RU84_04680 IPR005667 Sulphate ABC transporter permease protein 2 RU84_04680 IPR011865 Sulphate ABC transporter, permease protein CysT RU84_04680 IPR035906 RU84_04680 RU84_04685 IPR010662 Putative hydrolase RBBP9/YdeN RU84_04685 IPR029058 Alpha/Beta hydrolase fold RU84_04690 IPR005669 Thiosulphate/Sulfate-binding protein RU84_04690 IPR034408 RU84_04690 RU84_04695 IPR001544 Aminotransferase, class IV RU84_04695 IPR017824 Aminodeoxychorismate lyase, class IV RU84_04695 IPR036038 RU84_04695 RU84_04700 IPR003770 Uncharacterised protein family UPF0755, YceG-like RU84_04705 IPR018094 Thymidylate kinase RU84_04705 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_04705 IPR039430 RU84_04705 RU84_04710 IPR006683 Thioesterase superfamily RU84_04710 IPR029069 HotDog domain RU84_04715 IPR003953 FAD binding domain RU84_04715 IPR005288 L-aspartate oxidase RU84_04715 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RU84_04715 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RU84_04715 IPR036188 RU84_04715 RU84_04715 IPR037099 RU84_04715 RU84_04720 IPR001478 PDZ domain RU84_04720 IPR001940 Peptidase S1C RU84_04720 IPR009003 Trypsin-like cysteine/serine peptidase domain RU84_04720 IPR011782 Peptidase S1C, Do RU84_04720 IPR036034 RU84_04720 RU84_04725 IPR029069 HotDog domain RU84_04730 IPR000640 Translation elongation factor EFG, V domain RU84_04730 IPR000795 Elongation factor, GTP-binding domain RU84_04730 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RU84_04730 IPR005225 Small GTP-binding protein domain RU84_04730 IPR006297 Elongation factor 4 RU84_04730 IPR013842 GTP-binding protein LepA, C-terminal RU84_04730 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_04730 IPR031157 RU84_04730 RU84_04730 IPR035647 RU84_04730 RU84_04730 IPR038363 RU84_04730 RU84_04735 IPR000223 Peptidase S26A, signal peptidase I RU84_04735 IPR015927 Peptidase S24/S26A/S26B/S26C RU84_04735 IPR019533 Peptidase S26 RU84_04735 IPR019756 Peptidase S26A, signal peptidase I, serine active site RU84_04735 IPR019757 Peptidase S26A, signal peptidase I, lysine active site RU84_04735 IPR036286 RU84_04735 RU84_04740 IPR032314 RU84_04740 RU84_04745 IPR000999 Ribonuclease III domain RU84_04745 IPR011907 Ribonuclease III RU84_04745 IPR014720 Double-stranded RNA-binding domain RU84_04745 IPR036389 RU84_04745 RU84_04750 IPR004044 K Homology domain, type 2 RU84_04750 IPR005225 Small GTP-binding protein domain RU84_04750 IPR005662 GTP-binding protein Era RU84_04750 IPR006073 GTP binding domain RU84_04750 IPR009019 K homology domain, prokaryotic type RU84_04750 IPR015946 K homology domain-like, alpha/beta RU84_04750 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_04760 IPR003717 Recombination protein O, RecO RU84_04760 IPR012340 Nucleic acid-binding, OB-fold RU84_04760 IPR022572 DNA replication/recombination mediator RecO, N-terminal RU84_04765 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ RU84_04765 IPR013785 Aldolase-type TIM barrel RU84_04765 IPR036130 RU84_04765 RU84_04770 IPR009078 Ferritin-like superfamily RU84_04770 IPR010386 tRNA-hydroxylase MiaE RU84_04770 IPR012347 Ferritin-related RU84_04775 IPR002347 Glucose/ribitol dehydrogenase RU84_04775 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_04775 IPR036291 RU84_04775 RU84_04790 IPR003736 Phenylacetic acid degradation-related domain RU84_04790 IPR006683 Thioesterase superfamily RU84_04790 IPR029069 HotDog domain RU84_04795 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RU84_04795 IPR011057 Mss4-like RU84_04800 IPR013126 Heat shock protein 70 family RU84_04800 IPR018181 Heat shock protein 70, conserved site RU84_04800 IPR029047 Heat shock protein 70kD, peptide-binding domain RU84_04810 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RU84_04810 IPR004839 Aminotransferase, class I/classII RU84_04810 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_04810 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_04810 IPR015424 Pyridoxal phosphate-dependent transferase RU84_04820 IPR000014 PAS domain RU84_04820 IPR000160 GGDEF domain RU84_04820 IPR029787 Nucleotide cyclase RU84_04820 IPR035965 RU84_04820 RU84_04830 IPR001650 Helicase, C-terminal RU84_04830 IPR001943 UVR domain RU84_04830 IPR004807 UvrABC system, subunit B RU84_04830 IPR006935 Helicase/UvrB domain RU84_04830 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RU84_04830 IPR024759 UvrB, YAD/RRR-motif-containing domain RU84_04830 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_04830 IPR036876 RU84_04830 RU84_04835 IPR000566 Lipocalin/cytosolic fatty-acid binding domain RU84_04835 IPR002446 Lipocalin, bacterial RU84_04835 IPR012674 Calycin RU84_04835 IPR022271 Lipocalin, ApoD type RU84_04835 IPR022272 Lipocalin family conserved site RU84_04840 IPR000620 Drug/metabolite transporter RU84_04840 IPR004626 RarD protein RU84_04845 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I RU84_04845 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain RU84_04845 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain RU84_04845 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site RU84_04845 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family RU84_04845 IPR036291 RU84_04845 RU84_04860 IPR006073 GTP binding domain RU84_04860 IPR006074 GTP1/OBG, conserved site RU84_04860 IPR006169 GTP1/OBG domain RU84_04860 IPR014100 GTP-binding protein Obg/CgtA RU84_04860 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_04860 IPR035101 RU84_04860 RU84_04860 IPR036726 RU84_04860 RU84_04865 IPR001048 Aspartate/glutamate/uridylate kinase RU84_04865 IPR001057 Glutamate/acetylglutamate kinase RU84_04865 IPR002478 PUA domain RU84_04865 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase RU84_04865 IPR011529 Glutamate 5-kinase RU84_04865 IPR015947 PUA-like domain RU84_04865 IPR019797 Glutamate 5-kinase, conserved site RU84_04865 IPR036393 RU84_04865 RU84_04865 IPR036974 RU84_04865 RU84_04870 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial RU84_04870 IPR023214 HAD-like domain RU84_04870 IPR036412 RU84_04870 RU84_04875 IPR011673 Protein of unknown function DUF1615 RU84_04880 IPR001269 tRNA-dihydrouridine synthase RU84_04880 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 RU84_04880 IPR013785 Aldolase-type TIM barrel RU84_04880 IPR018517 tRNA-dihydrouridine synthase, conserved site RU84_04880 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal RU84_04880 IPR032887 RU84_04880 RU84_04885 IPR004136 2-nitropropane dioxygenase, NPD RU84_04885 IPR013785 Aldolase-type TIM barrel RU84_04890 IPR008217 Domain of unknown function DUF125, transmembrane RU84_04895 IPR011990 Tetratricopeptide-like helical domain RU84_04900 IPR003331 UDP-N-acetylglucosamine 2-epimerase RU84_04900 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type RU84_04915 IPR029044 Nucleotide-diphospho-sugar transferases RU84_04930 IPR002081 Cryptochrome/DNA photolyase, class 1 RU84_04930 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal RU84_04930 IPR006050 DNA photolyase, N-terminal RU84_04930 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_04930 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal RU84_04930 IPR036134 RU84_04930 RU84_04930 IPR036155 RU84_04930 RU84_04935 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RU84_04940 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_04940 IPR036188 RU84_04940 RU84_04945 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RU84_04945 IPR012338 Beta-lactamase/transpeptidase-like RU84_04945 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RU84_04950 IPR007963 Peptidase M61, catalytic domain RU84_04950 IPR024191 Peptidase M61 RU84_04950 IPR036034 RU84_04950 RU84_04955 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric RU84_04960 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RU84_04960 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RU84_04960 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RU84_04960 IPR020103 Pseudouridine synthase, catalytic domain RU84_04965 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic RU84_04965 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RU84_04965 IPR024084 Isopropylmalate dehydrogenase-like domain RU84_04980 IPR010645 Domain of unknown function DUF1228 RU84_04980 IPR036259 RU84_04980 RU84_04985 IPR000847 Transcription regulator HTH, LysR RU84_04985 IPR005119 LysR, substrate-binding RU84_04985 IPR036388 RU84_04985 RU84_04985 IPR036390 RU84_04985 RU84_04990 IPR001991 Sodium:dicarboxylate symporter RU84_04990 IPR036458 RU84_04990 RU84_04995 IPR003719 Phenazine biosynthesis PhzF protein RU84_05000 IPR001431 Peptidase M16, zinc-binding site RU84_05000 IPR007863 Peptidase M16, C-terminal domain RU84_05000 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RU84_05000 IPR011765 Peptidase M16, N-terminal RU84_05005 IPR021490 Protein of unknown function DUF3144 RU84_05015 IPR007899 CHAD RU84_05015 IPR023577 CYTH-like domain RU84_05015 IPR033469 RU84_05015 RU84_05015 IPR038186 RU84_05015 RU84_05020 IPR009305 Protein of unknown function DUF962 RU84_05025 IPR013785 Aldolase-type TIM barrel RU84_05025 IPR022998 Thiamin phosphate synthase superfamily RU84_05025 IPR034291 RU84_05025 RU84_05025 IPR036206 RU84_05025 RU84_05030 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase RU84_05030 IPR005814 Aminotransferase class-III RU84_05030 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_05030 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_05030 IPR015424 Pyridoxal phosphate-dependent transferase RU84_05035 IPR036736 RU84_05035 RU84_05040 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RU84_05040 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RU84_05040 IPR020103 Pseudouridine synthase, catalytic domain RU84_05045 IPR000330 SNF2-related RU84_05045 IPR001650 Helicase, C-terminal RU84_05045 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RU84_05045 IPR022737 RNA polymerase recycling, bacterial, C-terminal RU84_05045 IPR023949 RNA polymerase-associated protein RapA RU84_05045 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_05045 IPR038718 RU84_05045 RU84_05050 IPR002549 Uncharacterised protein family UPF0118 RU84_05055 IPR001647 DNA-binding HTH domain, TetR-type RU84_05055 IPR009057 Homeodomain-like RU84_05060 IPR001433 Oxidoreductase FAD/NAD(P)-binding RU84_05060 IPR001834 NADH:cytochrome b5 reductase (CBR) RU84_05060 IPR008333 Oxidoreductase, FAD-binding domain RU84_05060 IPR012675 Beta-grasp domain RU84_05060 IPR017938 Riboflavin synthase-like beta-barrel RU84_05060 IPR036010 RU84_05060 RU84_05060 IPR039261 RU84_05060 RU84_05065 IPR005804 Fatty acid desaturase, type 1 RU84_05070 IPR003680 Flavodoxin-like fold RU84_05070 IPR029039 Flavoprotein-like RU84_05075 IPR000847 Transcription regulator HTH, LysR RU84_05075 IPR005119 LysR, substrate-binding RU84_05075 IPR036388 RU84_05075 RU84_05075 IPR036390 RU84_05075 RU84_05080 IPR007497 Protein of unknown function DUF541 RU84_05085 IPR004637 2,4-diaminobutyrate 4-transaminase RU84_05085 IPR005814 Aminotransferase class-III RU84_05085 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_05085 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_05085 IPR015424 Pyridoxal phosphate-dependent transferase RU84_05090 IPR002129 Pyridoxal phosphate-dependent decarboxylase RU84_05090 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_05090 IPR015424 Pyridoxal phosphate-dependent transferase RU84_05090 IPR021115 Pyridoxal-phosphate binding site RU84_05095 IPR015590 Aldehyde dehydrogenase domain RU84_05095 IPR016160 Aldehyde dehydrogenase, cysteine active site RU84_05095 IPR016161 Aldehyde/histidinol dehydrogenase RU84_05095 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_05095 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_05095 IPR018114 Peptidase S1, trypsin family, active site RU84_05095 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RU84_05100 IPR000485 AsnC-type HTH domain RU84_05100 IPR011008 Dimeric alpha-beta barrel RU84_05100 IPR019887 Transcription regulator AsnC-type, C-terminal RU84_05100 IPR019888 Transcription regulator AsnC-type RU84_05100 IPR036388 RU84_05100 RU84_05100 IPR036390 RU84_05100 RU84_05105 IPR000399 TPP-binding enzyme, conserved site RU84_05105 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RU84_05105 IPR012000 Thiamine pyrophosphate enzyme, central domain RU84_05105 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RU84_05105 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme RU84_05105 IPR029035 DHS-like NAD/FAD-binding domain RU84_05105 IPR029061 Thiamin diphosphate-binding fold RU84_05110 IPR002293 Amino acid/polyamine transporter I RU84_05110 IPR004840 Amino acid permease, conserved site RU84_05110 IPR004841 Amino acid permease/ SLC12A domain RU84_05115 IPR024370 PBP domain RU84_05120 IPR000515 MetI-like domain RU84_05120 IPR011864 Phosphate ABC transporter, permease protein PstC RU84_05120 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain RU84_05120 IPR035906 RU84_05120 RU84_05125 IPR000515 MetI-like domain RU84_05125 IPR005672 Phosphate transport system permease protein PstA RU84_05125 IPR024573 Domain of unknown function DUF3333 RU84_05125 IPR035906 RU84_05125 RU84_05130 IPR003439 ABC transporter-like RU84_05130 IPR003593 AAA+ ATPase domain RU84_05130 IPR005670 Phosphate transport system permease protein 1 RU84_05130 IPR017871 ABC transporter, conserved site RU84_05130 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_05135 IPR002142 Peptidase S49 RU84_05135 IPR013703 Peptidase S49, N-terminal proteobacteria RU84_05135 IPR029045 ClpP/crotonase-like domain RU84_05140 IPR013783 Immunoglobulin-like fold RU84_05145 IPR014509 Uncharacterised conserved protein UCP020606 RU84_05150 IPR000362 Fumarate lyase family RU84_05150 IPR004769 Adenylosuccinate lyase RU84_05150 IPR008948 L-Aspartase-like RU84_05150 IPR013539 Adenylosuccinate lyase PurB, C-terminal RU84_05150 IPR020557 Fumarate lyase, conserved site RU84_05150 IPR022761 Fumarate lyase, N-terminal RU84_05150 IPR024083 Fumarase/histidase, N-terminal RU84_05155 IPR007451 Uncharacterised protein family UPF0274 RU84_05155 IPR035932 RU84_05155 RU84_05160 IPR004506 tRNA-specific 2-thiouridylase RU84_05160 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_05160 IPR023382 Adenine nucleotide alpha hydrolase-like domains RU84_05165 IPR000086 NUDIX hydrolase domain RU84_05165 IPR015797 NUDIX hydrolase domain-like RU84_05165 IPR020084 NUDIX hydrolase, conserved site RU84_05170 IPR001451 Bacterial transferase hexapeptide repeat RU84_05170 IPR011004 Trimeric LpxA-like RU84_05175 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RU84_05175 IPR012338 Beta-lactamase/transpeptidase-like RU84_05175 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal RU84_05175 IPR015956 Penicillin-binding protein-associated RU84_05175 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RU84_05175 IPR037167 RU84_05175 RU84_05190 IPR002828 Survival protein SurE-like phosphatase/nucleotidase RU84_05190 IPR030048 RU84_05190 RU84_05190 IPR036523 RU84_05190 RU84_05195 IPR011055 Duplicated hybrid motif RU84_05195 IPR016047 Peptidase M23 RU84_05195 IPR018392 LysM domain RU84_05195 IPR036779 RU84_05195 RU84_05200 IPR000847 Transcription regulator HTH, LysR RU84_05200 IPR005119 LysR, substrate-binding RU84_05200 IPR036388 RU84_05200 RU84_05200 IPR036390 RU84_05200 RU84_05205 IPR008269 Peptidase S16, Lon C-terminal RU84_05205 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RU84_05205 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_05205 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_05210 IPR011701 Major facilitator superfamily RU84_05210 IPR013783 Immunoglobulin-like fold RU84_05210 IPR036259 RU84_05210 RU84_05215 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RU84_05215 IPR004361 Glyoxalase I RU84_05215 IPR018146 Glyoxalase I, conserved site RU84_05215 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RU84_05220 IPR016833 Putative sodium bile acid cotransporter RU84_05220 IPR038770 RU84_05220 RU84_05225 IPR002150 Ribosomal protein L31 RU84_05225 IPR027491 Ribosomal protein L31 type A RU84_05225 IPR034704 RU84_05225 RU84_05230 IPR001633 EAL domain RU84_05230 IPR035919 RU84_05230 RU84_05230 IPR035965 RU84_05230 RU84_05240 IPR003739 Lysine-2,3-aminomutase family RU84_05240 IPR007197 Radical SAM RU84_05240 IPR013785 Aldolase-type TIM barrel RU84_05240 IPR022462 Lysine-2,3-aminomutase-like RU84_05245 IPR001059 Translation elongation factor P/YeiP, central RU84_05245 IPR008991 Translation protein SH3-like domain RU84_05245 IPR011768 Translation elongation factor P RU84_05245 IPR012340 Nucleic acid-binding, OB-fold RU84_05245 IPR013185 Translation elongation factor, KOW-like RU84_05245 IPR014722 Ribosomal protein L2 domain 2 RU84_05245 IPR015365 Elongation factor P, C-terminal RU84_05245 IPR020599 Translation elongation factor P/YeiP RU84_05250 IPR003706 Carbon starvation protein CstA RU84_05250 IPR025299 CstA C-terminal domain RU84_05255 IPR007423 Protein of unknown function DUF466 RU84_05265 IPR011032 GroES (chaperonin 10)-like RU84_05265 IPR013149 Alcohol dehydrogenase, C-terminal RU84_05265 IPR020843 Polyketide synthase, enoylreductase RU84_05265 IPR036291 RU84_05265 RU84_05270 IPR002347 Glucose/ribitol dehydrogenase RU84_05270 IPR036291 RU84_05270 RU84_05275 IPR009057 Homeodomain-like RU84_05275 IPR018060 DNA binding HTH domain, AraC-type RU84_05275 IPR018062 HTH domain AraC-type, conserved site RU84_05275 IPR020449 Transcription regulator HTH, AraC- type RU84_05275 IPR032783 RU84_05275 RU84_05280 IPR005110 MoeA, N-terminal and linker domain RU84_05280 IPR036135 RU84_05280 RU84_05280 IPR036425 RU84_05280 RU84_05285 IPR001647 DNA-binding HTH domain, TetR-type RU84_05285 IPR009057 Homeodomain-like RU84_05290 IPR003829 Pirin, N-terminal domain RU84_05290 IPR011051 RmlC-like cupin domain RU84_05290 IPR012093 Pirin RU84_05290 IPR014710 RmlC-like jelly roll fold RU84_05295 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RU84_05295 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RU84_05295 IPR036052 RU84_05295 RU84_05300 IPR013559 YheO-like RU84_05300 IPR039445 RU84_05300 RU84_05305 IPR007037 Siderophore-interacting protein RU84_05305 IPR013113 FAD-binding 9, siderophore-interacting RU84_05305 IPR039261 RU84_05305 RU84_05310 IPR000873 AMP-dependent synthetase/ligase RU84_05310 IPR020845 AMP-binding, conserved site RU84_05310 IPR025110 AMP-binding enzyme C-terminal domain RU84_05315 IPR001242 Condensation domain RU84_05315 IPR006162 Phosphopantetheine attachment site RU84_05315 IPR009081 Acyl carrier protein-like RU84_05315 IPR023213 Chloramphenicol acetyltransferase-like domain RU84_05315 IPR029058 Alpha/Beta hydrolase fold RU84_05315 IPR036736 RU84_05315 RU84_05320 IPR000522 ABC transporter, permease protein RU84_05320 IPR037294 RU84_05320 RU84_05325 IPR000522 ABC transporter, permease protein RU84_05325 IPR037294 RU84_05325 RU84_05330 IPR003439 ABC transporter-like RU84_05330 IPR003593 AAA+ ATPase domain RU84_05330 IPR017871 ABC transporter, conserved site RU84_05330 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_05335 IPR002491 ABC transporter periplasmic binding domain RU84_05340 IPR000531 TonB-dependent receptor, beta-barrel RU84_05340 IPR010105 TonB-dependent siderophore receptor RU84_05340 IPR010917 TonB-dependent receptor, conserved site RU84_05340 IPR012910 TonB-dependent receptor, plug RU84_05340 IPR036942 RU84_05340 RU84_05340 IPR037066 RU84_05340 RU84_05345 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase RU84_05345 IPR031043 RU84_05345 RU84_05345 IPR036188 RU84_05345 RU84_05350 IPR001242 Condensation domain RU84_05350 IPR023213 Chloramphenicol acetyltransferase-like domain RU84_05350 IPR036736 RU84_05350 RU84_05360 IPR000868 Isochorismatase-like RU84_05360 IPR009081 Acyl carrier protein-like RU84_05360 IPR016291 Isochorismatase RU84_05360 IPR036380 RU84_05360 RU84_05360 IPR036736 RU84_05360 RU84_05365 IPR002129 Pyridoxal phosphate-dependent decarboxylase RU84_05365 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_05365 IPR015424 Pyridoxal phosphate-dependent transferase RU84_05365 IPR021115 Pyridoxal-phosphate binding site RU84_05365 IPR023523 Histidine decarboxylase, bacteria RU84_05375 IPR003439 ABC transporter-like RU84_05375 IPR003593 AAA+ ATPase domain RU84_05375 IPR011527 ABC transporter type 1, transmembrane domain RU84_05375 IPR017871 ABC transporter, conserved site RU84_05375 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_05375 IPR036640 RU84_05375 RU84_05380 IPR003439 ABC transporter-like RU84_05380 IPR003593 AAA+ ATPase domain RU84_05380 IPR011527 ABC transporter type 1, transmembrane domain RU84_05380 IPR017871 ABC transporter, conserved site RU84_05380 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_05380 IPR036640 RU84_05380 RU84_05385 IPR001031 Thioesterase RU84_05385 IPR029058 Alpha/Beta hydrolase fold RU84_05390 IPR003542 Enterobactin synthetase-like, component D RU84_05390 IPR008278 4'-phosphopantetheinyl transferase superfamily RU84_05390 IPR037143 RU84_05390 RU84_05395 IPR004561 Isochorismate synthase RU84_05395 IPR005801 ADC synthase RU84_05395 IPR015890 Chorismate binding, C-terminal RU84_05400 IPR002477 Peptidoglycan binding-like RU84_05400 IPR005490 L,D-transpeptidase catalytic domain RU84_05400 IPR036365 RU84_05400 RU84_05400 IPR036366 RU84_05400 RU84_05400 IPR038063 RU84_05400 RU84_05405 IPR000257 Uroporphyrinogen decarboxylase (URO-D) RU84_05405 IPR006361 Uroporphyrinogen decarboxylase HemE RU84_05405 IPR038071 RU84_05405 RU84_05410 IPR008535 Protein of unknown function DUF817 RU84_05415 IPR021383 Protein of unknown function DUF3015 RU84_05420 IPR025178 Domain of unknown function DUF4105 RU84_05425 IPR001466 Beta-lactamase-related RU84_05425 IPR001586 Beta-lactamase, class-C active site RU84_05425 IPR012338 Beta-lactamase/transpeptidase-like RU84_05430 IPR001474 GTP cyclohydrolase I RU84_05430 IPR018234 GTP cyclohydrolase I, conserved site RU84_05430 IPR020602 GTP cyclohydrolase I domain RU84_05435 IPR002346 Molybdopterin dehydrogenase, FAD-binding RU84_05435 IPR002888 [2Fe-2S]-binding RU84_05435 IPR005107 CO dehydrogenase flavoprotein, C-terminal RU84_05435 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RU84_05435 IPR012175 Xanthine dehydrogenase, small subunit, bacteria RU84_05435 IPR012675 Beta-grasp domain RU84_05435 IPR014307 Xanthine dehydrogenase, small subunit RU84_05435 IPR016167 FAD-binding, type 2, subdomain 1 RU84_05435 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RU84_05435 IPR036010 RU84_05435 RU84_05435 IPR036318 RU84_05435 RU84_05435 IPR036683 RU84_05435 RU84_05435 IPR036884 RU84_05435 RU84_05440 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RU84_05440 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RU84_05440 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit RU84_05440 IPR036856 RU84_05440 RU84_05440 IPR037165 RU84_05440 RU84_05445 IPR003777 XdhC- CoxI RU84_05445 IPR014308 Xanthine dehydrogenase accessory protein XdhC RU84_05445 IPR027051 XdhC Rossmann domain RU84_05445 IPR036291 RU84_05445 RU84_05450 IPR002625 Smr protein/MutS2 C-terminal RU84_05450 IPR036063 RU84_05450 RU84_05455 IPR001468 Indole-3-glycerol phosphate synthase, conserved site RU84_05455 IPR011060 Ribulose-phosphate binding barrel RU84_05455 IPR013785 Aldolase-type TIM barrel RU84_05455 IPR013798 Indole-3-glycerol phosphate synthase RU84_05460 IPR000312 Glycosyl transferase, family 3 RU84_05460 IPR005940 Anthranilate phosphoribosyl transferase RU84_05460 IPR017459 Glycosyl transferase family 3, N-terminal domain RU84_05460 IPR035902 RU84_05460 RU84_05460 IPR036320 RU84_05460 RU84_05465 IPR000531 TonB-dependent receptor, beta-barrel RU84_05465 IPR012910 TonB-dependent receptor, plug RU84_05465 IPR037066 RU84_05465 RU84_05470 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal RU84_05470 IPR024571 ERAP1-like C-terminal domain RU84_05475 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain RU84_05475 IPR017926 Glutamine amidotransferase RU84_05475 IPR029062 Class I glutamine amidotransferase-like RU84_05480 IPR000587 Creatinase, N-terminal RU84_05480 IPR000994 Peptidase M24, structural domain RU84_05480 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RU84_05480 IPR032416 RU84_05480 RU84_05480 IPR036005 RU84_05480 RU84_05485 IPR000109 Proton-dependent oligopeptide transporter family RU84_05485 IPR005279 Amino acid/peptide transporter family RU84_05485 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site RU84_05485 IPR036259 RU84_05485 RU84_05490 IPR001637 Glutamine synthetase class-I, adenylation site RU84_05490 IPR004809 Glutamine synthetase type I RU84_05490 IPR008146 Glutamine synthetase, catalytic domain RU84_05490 IPR008147 Glutamine synthetase, beta-Grasp RU84_05490 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RU84_05490 IPR027302 Glutamine synthetase, N-terminal conserved site RU84_05490 IPR027303 Glutamine synthetase, glycine-rich site RU84_05490 IPR036651 RU84_05490 RU84_05495 IPR007440 Chorismate--pyruvate lyase RU84_05495 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RU84_05500 IPR000537 UbiA prenyltransferase family RU84_05500 IPR006370 4-hydroxybenzoate polyprenyl transferase RU84_05505 IPR005152 Lipase, secreted RU84_05505 IPR029058 Alpha/Beta hydrolase fold RU84_05515 IPR024402 Domain of unknown function DUF2726 RU84_05535 IPR001189 Manganese/iron superoxide dismutase RU84_05535 IPR019831 Manganese/iron superoxide dismutase, N-terminal RU84_05535 IPR019832 Manganese/iron superoxide dismutase, C-terminal RU84_05535 IPR019833 Manganese/iron superoxide dismutase, binding site RU84_05535 IPR036314 RU84_05535 RU84_05535 IPR036324 RU84_05535 RU84_05540 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RU84_05540 IPR036069 RU84_05540 RU84_05545 IPR001478 PDZ domain RU84_05545 IPR001940 Peptidase S1C RU84_05545 IPR009003 Trypsin-like cysteine/serine peptidase domain RU84_05545 IPR036034 RU84_05545 RU84_05550 IPR002646 Poly A polymerase, head domain RU84_05550 IPR012006 tRNA nucleotidyltransferase, proteobacteria RU84_05550 IPR032828 RU84_05550 RU84_05555 IPR002505 Phosphate acetyl/butaryl transferase RU84_05555 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase RU84_05555 IPR012301 Malic enzyme, N-terminal domain RU84_05555 IPR012302 Malic enzyme, NAD-binding RU84_05555 IPR036291 RU84_05555 RU84_05555 IPR037062 RU84_05555 RU84_05560 IPR000014 PAS domain RU84_05560 IPR000160 GGDEF domain RU84_05560 IPR001610 PAC motif RU84_05560 IPR001633 EAL domain RU84_05560 IPR013655 PAS fold-3 RU84_05560 IPR013767 PAS fold RU84_05560 IPR029787 Nucleotide cyclase RU84_05560 IPR035919 RU84_05560 RU84_05560 IPR035965 RU84_05560 RU84_05565 IPR006700 Ribosomal RNA small subunit methyltransferase E RU84_05565 IPR015947 PUA-like domain RU84_05565 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RU84_05565 IPR029028 Alpha/beta knot methyltransferases RU84_05570 IPR003171 Methylenetetrahydrofolate reductase RU84_05570 IPR004620 5,10-methylenetetrahydrofolate reductase RU84_05570 IPR029041 FAD-linked oxidoreductase-like RU84_05575 IPR000043 Adenosylhomocysteinase RU84_05575 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RU84_05575 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site RU84_05575 IPR034373 RU84_05575 RU84_05575 IPR036291 RU84_05575 RU84_05580 IPR005074 Peptidase C39, bacteriocin processing RU84_05585 IPR003779 Carboxymuconolactone decarboxylase-like RU84_05585 IPR029032 AhpD-like RU84_05590 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_05590 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_05590 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_05590 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type RU84_05590 IPR036250 RU84_05590 RU84_05590 IPR037069 RU84_05590 RU84_05595 IPR003698 Lipoyl synthase RU84_05595 IPR006638 Elongator protein 3/MiaB/NifB RU84_05595 IPR007197 Radical SAM RU84_05595 IPR013785 Aldolase-type TIM barrel RU84_05595 IPR031691 RU84_05595 RU84_05600 IPR001100 RU84_05600 RU84_05600 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RU84_05600 IPR016156 FAD/NAD-linked reductase, dimerisation domain RU84_05600 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_05600 IPR036188 RU84_05600 RU84_05610 IPR011701 Major facilitator superfamily RU84_05610 IPR036259 RU84_05610 RU84_05615 IPR011701 Major facilitator superfamily RU84_05615 IPR036259 RU84_05615 RU84_05620 IPR005618 Outer membrane protein, OmpW RU84_05620 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RU84_05625 IPR000994 Peptidase M24, structural domain RU84_05625 IPR001714 Peptidase M24, methionine aminopeptidase RU84_05625 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 RU84_05625 IPR036005 RU84_05625 RU84_05630 IPR001865 Ribosomal protein S2 RU84_05630 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid RU84_05630 IPR018130 Ribosomal protein S2, conserved site RU84_05630 IPR023591 Ribosomal protein S2, flavodoxin-like domain RU84_05635 IPR001816 Translation elongation factor EFTs/EF1B RU84_05635 IPR009060 UBA-like RU84_05635 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation RU84_05635 IPR018101 Translation elongation factor Ts, conserved site RU84_05635 IPR036402 RU84_05635 RU84_05640 IPR021856 Protein of unknown function DUF3465 RU84_05645 IPR003313 AraC-type arabinose-binding/dimerisation domain RU84_05645 IPR009057 Homeodomain-like RU84_05645 IPR018060 DNA binding HTH domain, AraC-type RU84_05645 IPR018062 HTH domain AraC-type, conserved site RU84_05645 IPR020449 Transcription regulator HTH, AraC- type RU84_05645 IPR037923 RU84_05645 RU84_05650 IPR011606 Branched-chain amino acid transport, permease RU84_05655 IPR008407 Branched-chain amino acid transport, AzlD RU84_05660 IPR009305 Protein of unknown function DUF962 RU84_05665 IPR009009 RlpA-like double-psi beta-barrel domain RU84_05665 IPR012997 Rare lipoprotein A, bacterial RU84_05665 IPR034718 RU84_05665 RU84_05665 IPR036908 RU84_05665 RU84_05670 IPR011757 Lytic transglycosylase MltB RU84_05670 IPR023346 Lysozyme-like domain RU84_05670 IPR031304 RU84_05670 RU84_05675 IPR001182 Cell cycle protein FtsW/RodA RU84_05675 IPR011923 Rod shape-determining protein RodA RU84_05675 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site RU84_05685 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 RU84_05685 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal RU84_05685 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF RU84_05690 IPR000412 ABC-2 transporter RU84_05690 IPR013525 ABC-2 type transporter RU84_05695 IPR003439 ABC transporter-like RU84_05695 IPR003593 AAA+ ATPase domain RU84_05695 IPR017871 ABC transporter, conserved site RU84_05695 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_05710 IPR012337 Ribonuclease H-like domain RU84_05710 IPR013520 Exonuclease, RNase T/DNA polymerase III RU84_05710 IPR024530 Protein of unknown function DUF3820 RU84_05710 IPR036397 RU84_05710 RU84_05715 IPR005152 Lipase, secreted RU84_05715 IPR029058 Alpha/Beta hydrolase fold RU84_05720 IPR001085 Serine hydroxymethyltransferase RU84_05720 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_05720 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_05720 IPR015424 Pyridoxal phosphate-dependent transferase RU84_05720 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site RU84_05720 IPR039429 RU84_05720 RU84_05725 IPR003423 Outer membrane efflux protein RU84_05725 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RU84_05730 IPR001036 Acriflavin resistance protein RU84_05730 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 RU84_05730 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RU84_05735 IPR006143 RND efflux pump, membrane fusion protein RU84_05735 IPR032317 RU84_05735 RU84_05740 IPR000847 Transcription regulator HTH, LysR RU84_05740 IPR005119 LysR, substrate-binding RU84_05740 IPR036388 RU84_05740 RU84_05740 IPR036390 RU84_05740 RU84_05745 IPR001638 Extracellular solute-binding protein, family 3 RU84_05745 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein RU84_05745 IPR018313 Extracellular solute-binding protein, family 3, conserved site RU84_05750 IPR000515 MetI-like domain RU84_05750 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RU84_05750 IPR035906 RU84_05750 RU84_05755 IPR000515 MetI-like domain RU84_05755 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RU84_05755 IPR035906 RU84_05755 RU84_05760 IPR003439 ABC transporter-like RU84_05760 IPR003593 AAA+ ATPase domain RU84_05760 IPR017871 ABC transporter, conserved site RU84_05760 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_05760 IPR030679 RU84_05760 RU84_05765 IPR000390 Small multidrug resistance protein family RU84_05770 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RU84_05775 IPR001539 Peptidase U32 RU84_05775 IPR032525 RU84_05775 RU84_05780 IPR000524 Transcription regulator HTH, GntR RU84_05780 IPR004839 Aminotransferase, class I/classII RU84_05780 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_05780 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_05780 IPR015424 Pyridoxal phosphate-dependent transferase RU84_05780 IPR036388 RU84_05780 RU84_05780 IPR036390 RU84_05780 RU84_05785 IPR003719 Phenazine biosynthesis PhzF protein RU84_05790 IPR001433 Oxidoreductase FAD/NAD(P)-binding RU84_05790 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RU84_05790 IPR008333 Oxidoreductase, FAD-binding domain RU84_05790 IPR017938 Riboflavin synthase-like beta-barrel RU84_05790 IPR039261 RU84_05790 RU84_05795 IPR023370 TsaA-like domain RU84_05795 IPR036413 RU84_05795 RU84_05795 IPR036414 RU84_05795 RU84_05800 IPR003416 MgtC/SapB/SrpB transporter RU84_05800 IPR025105 Domain of unknown function DUF4010 RU84_05805 IPR001482 Type II secretion system protein E RU84_05805 IPR003593 AAA+ ATPase domain RU84_05805 IPR007831 General secretory system II, protein E, N-terminal RU84_05805 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_05805 IPR037257 RU84_05805 RU84_05810 IPR005220 Viral OB-fold, YgiW RU84_05810 IPR036700 RU84_05810 RU84_05815 IPR001789 Signal transduction response regulator, receiver domain RU84_05815 IPR001867 Signal transduction response regulator, C-terminal RU84_05815 IPR011006 CheY-like superfamily RU84_05815 IPR036388 RU84_05815 RU84_05820 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_05820 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RU84_05820 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RU84_05820 IPR036097 RU84_05820 RU84_05820 IPR036890 RU84_05820 RU84_05825 IPR019600 Hemin uptake protein HemP RU84_05830 IPR000086 NUDIX hydrolase domain RU84_05830 IPR013785 Aldolase-type TIM barrel RU84_05830 IPR015797 NUDIX hydrolase domain-like RU84_05830 IPR020084 NUDIX hydrolase, conserved site RU84_05830 IPR020476 NUDIX hydrolase RU84_05830 IPR022998 Thiamin phosphate synthase superfamily RU84_05830 IPR036206 RU84_05830 RU84_05835 IPR011990 Tetratricopeptide-like helical domain RU84_05840 IPR001264 Glycosyl transferase, family 51 RU84_05840 IPR001460 Penicillin-binding protein, transpeptidase RU84_05840 IPR011813 Penicillin-binding protein 1B RU84_05840 IPR012338 Beta-lactamase/transpeptidase-like RU84_05840 IPR023346 Lysozyme-like domain RU84_05840 IPR028166 Bifunctional transglycosylase second domain RU84_05840 IPR036950 RU84_05840 RU84_05845 IPR002504 Inorganic polyphosphate/ATP-NAD kinase RU84_05845 IPR016064 ATP-NAD kinase-like domain RU84_05845 IPR017437 ATP-NAD kinase, PpnK-type, all-beta RU84_05845 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 RU84_05850 IPR009749 Protein of unknown function DUF1315 RU84_05855 IPR000312 Glycosyl transferase, family 3 RU84_05855 IPR017459 Glycosyl transferase family 3, N-terminal domain RU84_05855 IPR035902 RU84_05855 RU84_05855 IPR036320 RU84_05855 RU84_05860 IPR001991 Sodium:dicarboxylate symporter RU84_05860 IPR018107 Sodium:dicarboxylate symporter, conserved site RU84_05860 IPR023954 C4-dicarboxylate transport protein RU84_05860 IPR036458 RU84_05860 RU84_05865 IPR006089 Acyl-CoA dehydrogenase, conserved site RU84_05865 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_05865 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_05865 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_05865 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_05865 IPR036250 RU84_05865 RU84_05865 IPR037069 RU84_05865 RU84_05870 IPR000801 Putative esterase RU84_05870 IPR029058 Alpha/Beta hydrolase fold RU84_05875 IPR001086 Prephenate dehydratase RU84_05875 IPR002701 Chorismate mutase RU84_05875 IPR002912 ACT domain RU84_05875 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase RU84_05875 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain RU84_05875 IPR018528 Prephenate dehydratase, conserved site RU84_05875 IPR036263 RU84_05875 RU84_05875 IPR036979 RU84_05875 RU84_05880 IPR001986 Enolpyruvate transferase domain RU84_05880 IPR003099 Prephenate dehydrogenase RU84_05880 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase RU84_05880 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RU84_05880 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RU84_05880 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site RU84_05880 IPR036291 RU84_05880 RU84_05880 IPR036968 RU84_05880 RU84_05890 IPR001160 Peptidase M20C, Xaa-His dipeptidase RU84_05890 IPR002933 Peptidase M20 RU84_05890 IPR011650 Peptidase M20, dimerisation domain RU84_05895 IPR001279 Beta-lactamase-like RU84_05895 IPR013471 Ribonuclease Z/BN RU84_05895 IPR036866 RU84_05895 RU84_05900 IPR029058 Alpha/Beta hydrolase fold RU84_05905 IPR005583 Uncharacterised protein family UPF0246 RU84_05910 IPR009218 Predicted HD phosphohydrolase RU84_05915 IPR008867 Thiazole biosynthesis RU84_05915 IPR013785 Aldolase-type TIM barrel RU84_05915 IPR033983 RU84_05915 RU84_05920 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RU84_05920 IPR010035 ThiS, thiamine-biosynthesis RU84_05920 IPR012675 Beta-grasp domain RU84_05920 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RU84_05925 IPR006696 Protein of unknown function DUF423 RU84_05930 IPR000943 RNA polymerase sigma-70 RU84_05930 IPR007627 RNA polymerase sigma-70 region 2 RU84_05930 IPR007630 RNA polymerase sigma-70 region 4 RU84_05930 IPR009042 RNA polymerase sigma-70 region 1.2 RU84_05930 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria RU84_05930 IPR013324 RNA polymerase sigma factor, region 3/4 RU84_05930 IPR013325 RNA polymerase sigma factor, region 2 RU84_05930 IPR014284 RNA polymerase sigma-70 like domain RU84_05930 IPR036388 RU84_05930 RU84_05935 IPR001455 TusA-like domain RU84_05935 IPR036868 RU84_05935 RU84_05940 IPR002059 Cold-shock protein, DNA-binding RU84_05940 IPR011129 Cold shock protein RU84_05940 IPR012156 Cold shock, CspA RU84_05940 IPR012340 Nucleic acid-binding, OB-fold RU84_05940 IPR019844 Cold-shock conserved site RU84_05945 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RU84_05945 IPR001650 Helicase, C-terminal RU84_05945 IPR011545 DEAD/DEAH box helicase domain RU84_05945 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RU84_05945 IPR023554 RNA helicase, ATP-dependent, RhlB-type RU84_05945 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_05955 IPR000415 Nitroreductase-like RU84_05955 IPR026021 Putative NAD(P)H nitroreductase YdjA-like RU84_05955 IPR029479 Nitroreductase RU84_05960 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal RU84_05960 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent RU84_05960 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RU84_05960 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal RU84_05960 IPR013328 Dehydrogenase, multihelical RU84_05960 IPR036291 RU84_05960 RU84_05965 IPR013078 Histidine phosphatase superfamily, clade-1 RU84_05965 IPR029033 Histidine phosphatase superfamily RU84_05970 IPR007812 Type II secretion system protein L RU84_05970 IPR024230 GspL, cytoplasmic actin-ATPase-like domain RU84_05970 IPR025691 GspL periplasmic domain RU84_05975 IPR007690 Type II secretion system, protein M RU84_05975 IPR023229 Type II secretion system protein M, periplasmic domain RU84_05980 IPR001295 Dihydroorotate dehydrogenase, conserved site RU84_05980 IPR005719 Dihydroorotate dehydrogenase, class 2 RU84_05980 IPR005720 Dihydroorotate dehydrogenase domain RU84_05980 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 RU84_05980 IPR013785 Aldolase-type TIM barrel RU84_05985 IPR003825 Colicin V production, CvpA RU84_05990 IPR000836 Phosphoribosyltransferase domain RU84_05990 IPR005854 Amidophosphoribosyl transferase RU84_05990 IPR029055 Nucleophile aminohydrolases, N-terminal RU84_05990 IPR029057 Phosphoribosyltransferase-like RU84_05995 IPR001915 Peptidase M48 RU84_06005 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RU84_06005 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RU84_06005 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RU84_06005 IPR036291 RU84_06005 RU84_06010 IPR001915 Peptidase M48 RU84_06010 IPR011990 Tetratricopeptide-like helical domain RU84_06010 IPR030873 RU84_06010 RU84_06015 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related RU84_06015 IPR019004 Uncharacterised domain YOR215C, mitochondrial RU84_06015 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RU84_06020 IPR001911 Ribosomal protein S21 RU84_06020 IPR018278 Ribosomal protein S21, conserved site RU84_06020 IPR038380 RU84_06020 RU84_06025 IPR000905 Gcp-like domain RU84_06025 IPR017860 Peptidase M22, conserved site RU84_06025 IPR017861 Kae1/YgjD family RU84_06025 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD RU84_06035 IPR008533 Domain of unknown function DUF815 RU84_06035 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_06040 IPR002641 Patatin/Phospholipase A2-related RU84_06040 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RU84_06040 IPR021771 Triacylglycerol lipase RU84_06045 IPR000719 Protein kinase domain RU84_06045 IPR011009 Protein kinase-like domain RU84_06070 IPR005565 Haemolysin activator HlyB RU84_06070 IPR013686 Polypeptide-transport-associated, ShlB-type RU84_06070 IPR027282 Two partner secretion pathway transporter RU84_06070 IPR035251 RU84_06070 RU84_06090 IPR001584 Integrase, catalytic core RU84_06090 IPR012337 Ribonuclease H-like domain RU84_06090 IPR025246 Transposase IS30-like HTH domain RU84_06090 IPR036397 RU84_06090 RU84_06115 IPR001647 DNA-binding HTH domain, TetR-type RU84_06115 IPR009057 Homeodomain-like RU84_06120 IPR000847 Transcription regulator HTH, LysR RU84_06120 IPR005119 LysR, substrate-binding RU84_06120 IPR036388 RU84_06120 RU84_06120 IPR036390 RU84_06120 RU84_06125 IPR005814 Aminotransferase class-III RU84_06125 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_06125 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_06125 IPR015424 Pyridoxal phosphate-dependent transferase RU84_06130 IPR010061 Methylmalonate-semialdehyde dehydrogenase RU84_06130 IPR015590 Aldehyde dehydrogenase domain RU84_06130 IPR016160 Aldehyde dehydrogenase, cysteine active site RU84_06130 IPR016161 Aldehyde/histidinol dehydrogenase RU84_06130 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_06130 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_06135 IPR002293 Amino acid/polyamine transporter I RU84_06135 IPR004840 Amino acid permease, conserved site RU84_06135 IPR004841 Amino acid permease/ SLC12A domain RU84_06140 IPR018684 Protein of unknown function DUF2171 RU84_06145 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_06150 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related RU84_06150 IPR024078 Putative deacetylase LmbE-like domain RU84_06155 IPR008715 SAM-dependent methyltransferase, NodS-related RU84_06155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_06160 IPR001173 Glycosyltransferase 2-like RU84_06160 IPR029044 Nucleotide-diphospho-sugar transferases RU84_06165 IPR005220 Viral OB-fold, YgiW RU84_06165 IPR036700 RU84_06165 RU84_06170 IPR007024 BLUF domain RU84_06170 IPR036046 RU84_06170 RU84_06180 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RU84_06185 IPR003313 AraC-type arabinose-binding/dimerisation domain RU84_06185 IPR009057 Homeodomain-like RU84_06185 IPR018060 DNA binding HTH domain, AraC-type RU84_06185 IPR037923 RU84_06185 RU84_06190 IPR000073 Alpha/beta hydrolase fold-1 RU84_06190 IPR029058 Alpha/Beta hydrolase fold RU84_06195 IPR004445 Sodium/glutamate symporter RU84_06200 IPR008533 Domain of unknown function DUF815 RU84_06200 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_06205 IPR000524 Transcription regulator HTH, GntR RU84_06205 IPR008920 Transcription regulator FadR/GntR, C-terminal RU84_06205 IPR011711 GntR, C-terminal RU84_06205 IPR036388 RU84_06205 RU84_06205 IPR036390 RU84_06205 RU84_06215 IPR001647 DNA-binding HTH domain, TetR-type RU84_06215 IPR009057 Homeodomain-like RU84_06220 IPR007893 Spore coat protein U RU84_06225 IPR007893 Spore coat protein U RU84_06230 IPR007893 Spore coat protein U RU84_06235 IPR001584 Integrase, catalytic core RU84_06235 IPR012337 Ribonuclease H-like domain RU84_06235 IPR025246 Transposase IS30-like HTH domain RU84_06235 IPR036397 RU84_06235 RU84_06240 IPR008962 PapD-like RU84_06240 IPR013783 Immunoglobulin-like fold RU84_06240 IPR016147 PapD, N-terminal, bacterial RU84_06245 IPR000015 Outer membrane usher protein RU84_06245 IPR018030 Fimbrial membrane usher, conserved site RU84_06245 IPR025949 PapC-like, C-terminal domain RU84_06250 IPR007893 Spore coat protein U RU84_06250 IPR008966 Adhesion domain RU84_06260 IPR004736 Citrate-proton symport RU84_06260 IPR005828 General substrate transporter RU84_06260 IPR005829 Sugar transporter, conserved site RU84_06260 IPR015041 Osmosensory transporter coiled coil RU84_06260 IPR036259 RU84_06260 RU84_06260 IPR036292 RU84_06260 RU84_06270 IPR001647 DNA-binding HTH domain, TetR-type RU84_06270 IPR009057 Homeodomain-like RU84_06275 IPR000620 Drug/metabolite transporter RU84_06280 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RU84_06280 IPR004839 Aminotransferase, class I/classII RU84_06280 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_06280 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_06280 IPR015424 Pyridoxal phosphate-dependent transferase RU84_06280 IPR022518 Aspartate 4-decarboxylase RU84_06285 IPR006037 Regulator of K+ conductance, C-terminal RU84_06285 IPR006512 YidE/YbjL duplication RU84_06285 IPR022457 Aspartate-alanine antiporter RU84_06285 IPR036721 RU84_06285 RU84_06290 IPR014347 Tautomerase/MIF superfamily RU84_06290 IPR037479 RU84_06290 RU84_06295 IPR007498 Paraquat-inducible protein A RU84_06300 IPR007498 Paraquat-inducible protein A RU84_06305 IPR003399 Mammalian cell entry-related RU84_06310 IPR005586 Protein of unknown function DUF330 RU84_06315 IPR000895 Transthyretin/hydroxyisourate hydrolase RU84_06315 IPR014306 Hydroxyisourate hydrolase RU84_06315 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily RU84_06315 IPR023419 Transthyretin, conserved site RU84_06315 IPR036817 RU84_06315 RU84_06320 IPR005624 Domain of unknown function DUF336 RU84_06320 IPR038084 RU84_06320 RU84_06325 IPR001789 Signal transduction response regulator, receiver domain RU84_06325 IPR001867 Signal transduction response regulator, C-terminal RU84_06325 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response RU84_06325 IPR011006 CheY-like superfamily RU84_06325 IPR036388 RU84_06325 RU84_06330 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_06330 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RU84_06330 IPR006290 Heavy metal sensor kinase RU84_06330 IPR036097 RU84_06330 RU84_06330 IPR036890 RU84_06330 RU84_06335 IPR000566 Lipocalin/cytosolic fatty-acid binding domain RU84_06335 IPR002446 Lipocalin, bacterial RU84_06335 IPR012674 Calycin RU84_06335 IPR022271 Lipocalin, ApoD type RU84_06335 IPR022272 Lipocalin family conserved site RU84_06340 IPR005804 Fatty acid desaturase, type 1 RU84_06340 IPR015876 Fatty acid desaturase, type 1, core RU84_06345 IPR036188 RU84_06345 RU84_06350 IPR010775 Protein of unknown function DUF1365 RU84_06355 IPR003333 Mycolic acid cyclopropane synthase RU84_06355 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_06360 IPR010721 Protein of unknown function DUF1295 RU84_06365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_06370 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_06370 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RU84_06370 IPR036097 RU84_06370 RU84_06370 IPR036890 RU84_06370 RU84_06375 IPR001789 Signal transduction response regulator, receiver domain RU84_06375 IPR001867 Signal transduction response regulator, C-terminal RU84_06375 IPR011006 CheY-like superfamily RU84_06375 IPR016032 Signal transduction response regulator, C-terminal effector RU84_06375 IPR036388 RU84_06375 RU84_06380 IPR016087 Chalcone isomerase RU84_06385 IPR032710 RU84_06385 RU84_06390 IPR000182 GNAT domain RU84_06390 IPR016181 Acyl-CoA N-acyltransferase RU84_06395 IPR001920 Asp/Glu racemase RU84_06395 IPR004380 Aspartate racemase RU84_06395 IPR015942 Asp/Glu/hydantoin racemase RU84_06400 IPR000620 Drug/metabolite transporter RU84_06405 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase RU84_06405 IPR011042 Six-bladed beta-propeller, TolB-like RU84_06405 IPR012938 Glucose/Sorbosone dehydrogenase RU84_06415 IPR001584 Integrase, catalytic core RU84_06415 IPR012337 Ribonuclease H-like domain RU84_06415 IPR025246 Transposase IS30-like HTH domain RU84_06415 IPR036397 RU84_06415 RU84_06425 IPR011701 Major facilitator superfamily RU84_06425 IPR036259 RU84_06425 RU84_06430 IPR001647 DNA-binding HTH domain, TetR-type RU84_06430 IPR009057 Homeodomain-like RU84_06430 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RU84_06430 IPR036271 RU84_06430 RU84_06435 IPR001991 Sodium:dicarboxylate symporter RU84_06435 IPR018107 Sodium:dicarboxylate symporter, conserved site RU84_06435 IPR023954 C4-dicarboxylate transport protein RU84_06435 IPR036458 RU84_06435 RU84_06445 IPR001279 Beta-lactamase-like RU84_06445 IPR017782 Hydroxyacylglutathione hydrolase RU84_06445 IPR032282 RU84_06445 RU84_06445 IPR036866 RU84_06445 RU84_06450 IPR000515 MetI-like domain RU84_06450 IPR035906 RU84_06450 RU84_06455 IPR003439 ABC transporter-like RU84_06455 IPR003593 AAA+ ATPase domain RU84_06455 IPR017871 ABC transporter, conserved site RU84_06455 IPR018449 NIL domain RU84_06455 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_06460 IPR004872 Lipoprotein NlpA family RU84_06465 IPR000115 Phosphoribosylglycinamide synthetase RU84_06465 IPR011054 Rudiment single hybrid motif RU84_06465 IPR013815 ATP-grasp fold, subdomain 1 RU84_06465 IPR016185 Pre-ATP-grasp domain RU84_06465 IPR020559 Phosphoribosylglycinamide synthetase, conserved site RU84_06465 IPR020560 Phosphoribosylglycinamide synthetase, C-domain RU84_06465 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RU84_06465 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal RU84_06465 IPR037123 RU84_06465 RU84_06470 IPR002695 AICARFT/IMPCHase bienzyme RU84_06470 IPR011607 Methylglyoxal synthase-like domain RU84_06470 IPR016193 Cytidine deaminase-like RU84_06470 IPR024051 AICAR transformylase domain RU84_06470 IPR036914 RU84_06470 RU84_06475 IPR002197 DNA binding HTH domain, Fis-type RU84_06475 IPR005412 DNA-binding protein Fis RU84_06475 IPR009057 Homeodomain-like RU84_06480 IPR011723 Zinc finger/thioredoxin putative RU84_06480 IPR021834 Protein of unknown function DUF3426 RU84_06485 IPR004498 Ribosomal protein L11 methyltransferase RU84_06485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_06495 IPR002218 Glucose-inhibited division protein A-related RU84_06495 IPR004416 Glucose-inhibited division protein A RU84_06495 IPR020595 Glucose-inhibited division protein A-related, conserved site RU84_06495 IPR026904 GidA associated domain 3 RU84_06495 IPR036188 RU84_06495 RU84_06500 IPR026881 WYL domain RU84_06500 IPR036390 RU84_06500 RU84_06505 IPR016450 Uncharacterised conserved protein UCP005522 RU84_06505 IPR025841 Circularly permuted ATP-grasp type 2 RU84_06510 IPR007296 Domain of unknown function DUF403 RU84_06515 IPR002931 Transglutaminase-like RU84_06515 IPR013589 Bacterial transglutaminase-like, N-terminal RU84_06515 IPR038765 RU84_06515 RU84_06520 IPR001353 Proteasome, subunit alpha/beta RU84_06520 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 RU84_06520 IPR029055 Nucleophile aminohydrolases, N-terminal RU84_06525 IPR000821 Alanine racemase RU84_06525 IPR001608 Alanine racemase, N-terminal RU84_06525 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RU84_06525 IPR011079 Alanine racemase, C-terminal RU84_06525 IPR029066 PLP-binding barrel RU84_06530 IPR007692 DNA helicase, DnaB type RU84_06530 IPR007693 DNA helicase, DnaB-like, N-terminal RU84_06530 IPR007694 DNA helicase, DnaB-like, C-terminal RU84_06530 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RU84_06530 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_06530 IPR036185 RU84_06530 RU84_06535 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RU84_06535 IPR020069 Ribosomal protein L9, C-terminal RU84_06535 IPR020070 Ribosomal protein L9, N-terminal RU84_06535 IPR020594 Ribosomal protein L9, bacteria/chloroplast RU84_06535 IPR036791 RU84_06535 RU84_06535 IPR036935 RU84_06535 RU84_06540 IPR001648 Ribosomal protein S18 RU84_06540 IPR018275 Ribosomal protein S18, conserved site RU84_06540 IPR036870 RU84_06540 RU84_06545 IPR000529 Ribosomal protein S6 RU84_06545 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RU84_06545 IPR020814 Ribosomal protein S6, plastid/chloroplast RU84_06545 IPR020815 Ribosomal protein S6, conserved site RU84_06545 IPR035980 RU84_06545 RU84_06550 IPR000537 UbiA prenyltransferase family RU84_06550 IPR006369 Protohaem IX farnesyltransferase RU84_06550 IPR030470 RU84_06550 RU84_06555 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes RU84_06555 IPR014210 Cytochrome o ubiquinol oxidase subunit IV RU84_06560 IPR000298 Cytochrome c oxidase subunit III domain RU84_06560 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RU84_06560 IPR014206 Cytochrome o ubiquinol oxidase, subunit III RU84_06560 IPR035973 RU84_06560 RU84_06565 IPR000883 Cytochrome c oxidase subunit I RU84_06565 IPR014207 Cytochrome o ubiquinol oxidase, subunit I RU84_06565 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RU84_06565 IPR036927 RU84_06565 RU84_06570 IPR002429 Cytochrome c oxidase subunit II C-terminal RU84_06570 IPR006333 Cytochrome o ubiquinol oxidase subunit II RU84_06570 IPR008972 Cupredoxin RU84_06570 IPR010514 COX aromatic rich motif RU84_06570 IPR036257 RU84_06570 RU84_06575 IPR010432 RDD RU84_06575 IPR025640 Domain of unknown function DUF4339 RU84_06580 IPR000121 PEP-utilising enzyme, C-terminal RU84_06580 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding RU84_06580 IPR006319 Phosphoenolpyruvate synthase RU84_06580 IPR008279 PEP-utilising enzyme, mobile domain RU84_06580 IPR013815 ATP-grasp fold, subdomain 1 RU84_06580 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RU84_06580 IPR018274 PEP-utilising enzyme, active site RU84_06580 IPR023151 PEP-utilising enzyme, conserved site RU84_06580 IPR036637 RU84_06580 RU84_06585 IPR005177 Bifunctional kinase-pyrophosphorylase RU84_06585 IPR026530 Phosphoenolpyruvate synthase regulatory protein RU84_06590 IPR011990 Tetratricopeptide-like helical domain RU84_06590 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA RU84_06595 IPR002509 Polysaccharide deacetylase RU84_06595 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RU84_06595 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB RU84_06595 IPR032772 RU84_06595 RU84_06600 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA RU84_06600 IPR029044 Nucleotide-diphospho-sugar transferases RU84_06605 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD RU84_06610 IPR036188 RU84_06610 RU84_06615 IPR011251 Luciferase-like domain RU84_06615 IPR019949 Luciferase family oxidoreductase, group 1 RU84_06615 IPR036661 RU84_06615 RU84_06630 IPR000847 Transcription regulator HTH, LysR RU84_06630 IPR005119 LysR, substrate-binding RU84_06630 IPR036388 RU84_06630 RU84_06630 IPR036390 RU84_06630 RU84_06635 IPR029062 Class I glutamine amidotransferase-like RU84_06635 IPR032633 RU84_06635 RU84_06640 IPR000352 Peptide chain release factor class I/class II RU84_06640 IPR004373 Peptide chain release factor 1 RU84_06640 IPR005139 Peptide chain release factor RU84_06645 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RU84_06645 IPR004556 Modification methylase HemK RU84_06645 IPR007848 Methyltransferase small domain RU84_06645 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific RU84_06645 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_06650 IPR009057 Homeodomain-like RU84_06650 IPR018060 DNA binding HTH domain, AraC-type RU84_06650 IPR032687 RU84_06650 RU84_06655 IPR002347 Glucose/ribitol dehydrogenase RU84_06655 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_06655 IPR036291 RU84_06655 RU84_06660 IPR006089 Acyl-CoA dehydrogenase, conserved site RU84_06660 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_06660 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_06660 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_06660 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_06660 IPR036250 RU84_06660 RU84_06660 IPR037069 RU84_06660 RU84_06665 IPR000873 AMP-dependent synthetase/ligase RU84_06665 IPR020845 AMP-binding, conserved site RU84_06665 IPR025110 AMP-binding enzyme C-terminal domain RU84_06670 IPR002563 Flavin reductase-like, FMN-binding RU84_06670 IPR012349 FMN-binding split barrel RU84_06675 IPR000594 UBA/THIF-type NAD/FAD binding fold RU84_06675 IPR035985 RU84_06675 RU84_06680 IPR004147 UbiB domain RU84_06680 IPR011009 Protein kinase-like domain RU84_06685 IPR006156 Dihydroneopterin aldolase RU84_06685 IPR006157 Dihydroneopterin aldolase/epimerase domain RU84_06690 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK RU84_06690 IPR035907 RU84_06690 RU84_06695 IPR004623 Potassium-transporting ATPase A chain RU84_06700 IPR001757 Cation-transporting P-type ATPase RU84_06700 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA RU84_06700 IPR008250 P-type ATPase, A domain RU84_06700 IPR018303 P-type ATPase, phosphorylation site RU84_06700 IPR023298 P-type ATPase, transmembrane domain RU84_06700 IPR023299 P-type ATPase, cytoplasmic domain N RU84_06700 IPR036412 RU84_06700 RU84_06705 IPR003820 Potassium-transporting ATPase C chain RU84_06710 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_06710 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RU84_06710 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal RU84_06710 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RU84_06710 IPR006016 UspA RU84_06710 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_06710 IPR025201 Sensor protein KdpD, transmembrane domain RU84_06710 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_06710 IPR029016 GAF domain-like RU84_06710 IPR036097 RU84_06710 RU84_06710 IPR036890 RU84_06710 RU84_06710 IPR038318 RU84_06710 RU84_06715 IPR001789 Signal transduction response regulator, receiver domain RU84_06715 IPR001867 Signal transduction response regulator, C-terminal RU84_06715 IPR011006 CheY-like superfamily RU84_06715 IPR036388 RU84_06715 RU84_06720 IPR008146 Glutamine synthetase, catalytic domain RU84_06720 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RU84_06725 IPR021242 Protein of unknown function DUF2799 RU84_06730 IPR009078 Ferritin-like superfamily RU84_06730 IPR011566 Ubiquinone biosynthesis protein Coq7 RU84_06735 IPR011701 Major facilitator superfamily RU84_06735 IPR036259 RU84_06735 RU84_06740 IPR000184 Bacterial surface antigen (D15) RU84_06740 IPR010827 Surface antigen variable number RU84_06740 IPR035243 RU84_06740 RU84_06745 IPR007452 Protein of unknown function DUF490 RU84_06755 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RU84_06755 IPR004406 Aconitase B, bacterial RU84_06755 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RU84_06755 IPR015929 Aconitase B, N-terminal, bacterial RU84_06755 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RU84_06755 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 RU84_06755 IPR015933 Aconitase B, HEAT-like, bacterial RU84_06755 IPR018136 Aconitase family, 4Fe-4S cluster binding site RU84_06755 IPR036008 RU84_06755 RU84_06755 IPR036288 RU84_06755 RU84_06765 IPR005821 Ion transport domain RU84_06765 IPR028325 Voltage-gated potassium channel RU84_06770 IPR011701 Major facilitator superfamily RU84_06770 IPR036259 RU84_06770 RU84_06780 IPR019613 Protein of unknown function DUF4198 RU84_06785 IPR000847 Transcription regulator HTH, LysR RU84_06785 IPR005119 LysR, substrate-binding RU84_06785 IPR036388 RU84_06785 RU84_06785 IPR036390 RU84_06785 RU84_06790 IPR007382 Uncharacterised protein family UPF0756, transmembrame RU84_06800 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RU84_06800 IPR002942 RNA-binding S4 domain RU84_06800 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RU84_06800 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RU84_06800 IPR020103 Pseudouridine synthase, catalytic domain RU84_06800 IPR036986 RU84_06800 RU84_06805 IPR000182 GNAT domain RU84_06805 IPR016181 Acyl-CoA N-acyltransferase RU84_06805 IPR017255 Acetyltransferase, GNAT, predicted RU84_06810 IPR007337 RelB antitoxin/Antitoxin DinJ RU84_06810 IPR013321 Arc-type ribbon-helix-helix RU84_06815 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RU84_06815 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RU84_06815 IPR020103 Pseudouridine synthase, catalytic domain RU84_06820 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE RU84_06820 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_06825 IPR002099 DNA mismatch repair protein family RU84_06825 IPR013507 DNA mismatch repair protein, C-terminal RU84_06825 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RU84_06825 IPR014762 DNA mismatch repair, conserved site RU84_06825 IPR014790 MutL, C-terminal, dimerisation RU84_06825 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_06825 IPR020667 DNA mismatch repair protein, MutL RU84_06825 IPR036890 RU84_06825 RU84_06825 IPR037198 RU84_06825 RU84_06830 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase RU84_06830 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_06835 IPR005001 Host factor Hfq RU84_06835 IPR010920 Like-Sm (LSM) domain RU84_06840 IPR000620 Drug/metabolite transporter RU84_06845 IPR000415 Nitroreductase-like RU84_06845 IPR029479 Nitroreductase RU84_06850 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RU84_06850 IPR010138 UDP-2,3-diacylglucosamine hydrolase RU84_06855 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain RU84_06855 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site RU84_06855 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase RU84_06855 IPR029000 Cyclophilin-like domain RU84_06860 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RU84_06860 IPR004514 Glutamine-tRNA synthetase RU84_06860 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain RU84_06860 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_06860 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain RU84_06860 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RU84_06860 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain RU84_06860 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain RU84_06860 IPR022861 Glutamine-tRNA ligase, bacterial RU84_06865 IPR017926 Glutamine amidotransferase RU84_06865 IPR029062 Class I glutamine amidotransferase-like RU84_06870 IPR009246 Ethanolamine ammonia-lyase light chain RU84_06875 IPR010628 Ethanolamine ammonia lyase large subunit RU84_06875 IPR013785 Aldolase-type TIM barrel RU84_06880 IPR002293 Amino acid/polyamine transporter I RU84_06880 IPR004757 Ethanolamine permease RU84_06885 IPR015590 Aldehyde dehydrogenase domain RU84_06885 IPR016160 Aldehyde dehydrogenase, cysteine active site RU84_06885 IPR016161 Aldehyde/histidinol dehydrogenase RU84_06885 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_06885 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_06885 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RU84_06890 IPR001867 Signal transduction response regulator, C-terminal RU84_06890 IPR011990 Tetratricopeptide-like helical domain RU84_06890 IPR016032 Signal transduction response regulator, C-terminal effector RU84_06890 IPR029016 GAF domain-like RU84_06895 IPR022742 Putative lysophospholipase RU84_06895 IPR029058 Alpha/Beta hydrolase fold RU84_06900 IPR001670 Alcohol dehydrogenase, iron-type RU84_06900 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RU84_06905 IPR003593 AAA+ ATPase domain RU84_06905 IPR010285 DNA helicase Pif1 like RU84_06905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_06905 IPR029491 Helicase Helix-turn-helix domain RU84_06910 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase RU84_06910 IPR014347 Tautomerase/MIF superfamily RU84_06915 IPR000417 Hydroxyethylthiazole kinase RU84_06915 IPR029056 Ribokinase-like RU84_06930 IPR012779 Peptidase M1, alanyl aminopeptidase RU84_06930 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal RU84_06930 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RU84_06930 IPR027268 RU84_06930 RU84_06930 IPR035414 RU84_06930 RU84_06930 IPR037144 RU84_06930 RU84_06930 IPR038438 RU84_06930 RU84_06935 IPR007893 Spore coat protein U RU84_06945 IPR000015 Outer membrane usher protein RU84_06945 IPR025949 PapC-like, C-terminal domain RU84_06950 IPR007893 Spore coat protein U RU84_06955 IPR004045 Glutathione S-transferase, N-terminal RU84_06955 IPR004046 Glutathione S-transferase, C-terminal RU84_06955 IPR036249 RU84_06955 RU84_06955 IPR036282 RU84_06955 RU84_06960 IPR002347 Glucose/ribitol dehydrogenase RU84_06960 IPR036291 RU84_06960 RU84_06965 IPR002347 Glucose/ribitol dehydrogenase RU84_06965 IPR036291 RU84_06965 RU84_06970 IPR002701 Chorismate mutase RU84_06970 IPR008240 Chorismate mutase, periplasmic RU84_06970 IPR036263 RU84_06970 RU84_06975 IPR000485 AsnC-type HTH domain RU84_06975 IPR011008 Dimeric alpha-beta barrel RU84_06975 IPR019887 Transcription regulator AsnC-type, C-terminal RU84_06975 IPR019888 Transcription regulator AsnC-type RU84_06975 IPR036388 RU84_06975 RU84_06975 IPR036390 RU84_06975 RU84_06985 IPR001584 Integrase, catalytic core RU84_06985 IPR012337 Ribonuclease H-like domain RU84_06985 IPR025246 Transposase IS30-like HTH domain RU84_06985 IPR036397 RU84_06985 RU84_06995 IPR001647 DNA-binding HTH domain, TetR-type RU84_06995 IPR009057 Homeodomain-like RU84_07000 IPR000531 TonB-dependent receptor, beta-barrel RU84_07000 IPR010105 TonB-dependent siderophore receptor RU84_07000 IPR012910 TonB-dependent receptor, plug RU84_07000 IPR036942 RU84_07000 RU84_07000 IPR037066 RU84_07000 RU84_07005 IPR006685 Mechanosensitive ion channel MscS RU84_07005 IPR010920 Like-Sm (LSM) domain RU84_07035 IPR000531 TonB-dependent receptor, beta-barrel RU84_07035 IPR010105 TonB-dependent siderophore receptor RU84_07035 IPR010917 TonB-dependent receptor, conserved site RU84_07035 IPR012910 TonB-dependent receptor, plug RU84_07035 IPR036942 RU84_07035 RU84_07035 IPR037066 RU84_07035 RU84_07040 IPR001584 Integrase, catalytic core RU84_07040 IPR012337 Ribonuclease H-like domain RU84_07040 IPR025246 Transposase IS30-like HTH domain RU84_07040 IPR036397 RU84_07040 RU84_07045 IPR005618 Outer membrane protein, OmpW RU84_07045 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RU84_07060 IPR003439 ABC transporter-like RU84_07060 IPR003593 AAA+ ATPase domain RU84_07060 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_07065 IPR006015 Universal stress protein A RU84_07065 IPR006016 UspA RU84_07065 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_07080 IPR010432 RDD RU84_07085 IPR001757 Cation-transporting P-type ATPase RU84_07085 IPR004014 Cation-transporting P-type ATPase, N-terminal RU84_07085 IPR006415 Magnesium-transporting P-type ATPase, subfamily IIIB RU84_07085 IPR008250 P-type ATPase, A domain RU84_07085 IPR018303 P-type ATPase, phosphorylation site RU84_07085 IPR023214 HAD-like domain RU84_07085 IPR023298 P-type ATPase, transmembrane domain RU84_07085 IPR023299 P-type ATPase, cytoplasmic domain N RU84_07085 IPR036412 RU84_07085 RU84_07090 IPR003416 MgtC/SapB/SrpB transporter RU84_07095 IPR004711 Benzoate transporter RU84_07100 IPR000485 AsnC-type HTH domain RU84_07100 IPR011008 Dimeric alpha-beta barrel RU84_07100 IPR019887 Transcription regulator AsnC-type, C-terminal RU84_07100 IPR019888 Transcription regulator AsnC-type RU84_07100 IPR036388 RU84_07100 RU84_07100 IPR036390 RU84_07100 RU84_07105 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RU84_07110 IPR001585 Transaldolase RU84_07110 IPR004730 Transaldolase type 1 RU84_07110 IPR013785 Aldolase-type TIM barrel RU84_07110 IPR018225 Transaldolase, active site RU84_07115 IPR000847 Transcription regulator HTH, LysR RU84_07115 IPR005119 LysR, substrate-binding RU84_07115 IPR036388 RU84_07115 RU84_07115 IPR036390 RU84_07115 RU84_07120 IPR007896 Transmembrane pair, bacterial RU84_07125 IPR002155 Thiolase RU84_07125 IPR016039 Thiolase-like RU84_07125 IPR020616 Thiolase, N-terminal RU84_07125 IPR020617 Thiolase, C-terminal RU84_07130 IPR002347 Glucose/ribitol dehydrogenase RU84_07130 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_07130 IPR036291 RU84_07130 RU84_07135 IPR002539 MaoC-like domain RU84_07135 IPR003965 Fatty acid synthase RU84_07135 IPR029069 HotDog domain RU84_07140 IPR001466 Beta-lactamase-related RU84_07140 IPR012338 Beta-lactamase/transpeptidase-like RU84_07145 IPR001647 DNA-binding HTH domain, TetR-type RU84_07145 IPR009057 Homeodomain-like RU84_07145 IPR036271 RU84_07145 RU84_07150 IPR011701 Major facilitator superfamily RU84_07150 IPR036259 RU84_07150 RU84_07155 IPR024079 Metallopeptidase, catalytic domain RU84_07165 IPR001270 ClpA/B family RU84_07165 IPR003593 AAA+ ATPase domain RU84_07165 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RU84_07165 IPR012763 DNA polymerase III, subunit gamma/ tau RU84_07165 IPR022754 DNA polymerase III, gamma subunit, domain III RU84_07165 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_07170 IPR007312 Phosphoesterase RU84_07170 IPR008475 Bacterial phospholipase C, C-terminal domain RU84_07170 IPR017767 Bacterial phospholipase C, phosphocholine-specific RU84_07170 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RU84_07175 IPR029069 HotDog domain RU84_07180 IPR001670 Alcohol dehydrogenase, iron-type RU84_07180 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RU84_07185 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain RU84_07185 IPR015943 WD40/YVTN repeat-like-containing domain RU84_07185 IPR019405 Lactonase, 7-bladed beta propeller RU84_07190 IPR017867 Protein-tyrosine phosphatase, low molecular weight RU84_07190 IPR023485 Phosphotyrosine protein phosphatase I superfamily RU84_07190 IPR036196 RU84_07190 RU84_07195 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase RU84_07195 IPR006094 FAD linked oxidase, N-terminal RU84_07195 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal RU84_07195 IPR016167 FAD-binding, type 2, subdomain 1 RU84_07195 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RU84_07195 IPR036318 RU84_07195 RU84_07195 IPR036635 RU84_07195 RU84_07200 IPR003848 Domain of unknown function DUF218 RU84_07205 IPR022742 Putative lysophospholipase RU84_07205 IPR029058 Alpha/Beta hydrolase fold RU84_07215 IPR029055 Nucleophile aminohydrolases, N-terminal RU84_07215 IPR029132 Choloylglycine hydrolase/NAAA C-terminal RU84_07220 IPR002932 Glutamate synthase domain RU84_07220 IPR013785 Aldolase-type TIM barrel RU84_07220 IPR024188 Glutamate synthase large subunit-like protein RU84_07220 IPR027283 Glutamate synthase large subunit-like protein, bacteria RU84_07225 IPR005625 PepSY-associated TM helix RU84_07230 IPR001584 Integrase, catalytic core RU84_07230 IPR012337 Ribonuclease H-like domain RU84_07230 IPR025246 Transposase IS30-like HTH domain RU84_07230 IPR036397 RU84_07230 RU84_07235 IPR001647 DNA-binding HTH domain, TetR-type RU84_07235 IPR009057 Homeodomain-like RU84_07235 IPR036271 RU84_07235 RU84_07240 IPR001584 Integrase, catalytic core RU84_07240 IPR012337 Ribonuclease H-like domain RU84_07240 IPR025246 Transposase IS30-like HTH domain RU84_07240 IPR036397 RU84_07240 RU84_07245 IPR016084 Haem oxygenase-like, multi-helical RU84_07250 IPR024989 Major facilitator superfamily associated domain RU84_07250 IPR026032 Phenylproprionate/maltose permease RU84_07250 IPR036259 RU84_07250 RU84_07260 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase RU84_07260 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RU84_07260 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal RU84_07260 IPR005482 Biotin carboxylase, C-terminal RU84_07260 IPR011054 Rudiment single hybrid motif RU84_07260 IPR013815 ATP-grasp fold, subdomain 1 RU84_07260 IPR016185 Pre-ATP-grasp domain RU84_07265 IPR000089 Biotin/lipoyl attachment RU84_07265 IPR001249 Acetyl-CoA biotin carboxyl carrier RU84_07265 IPR011053 Single hybrid motif RU84_07270 IPR001874 Dehydroquinase, class II RU84_07270 IPR018509 Dehydroquinase, class II, conserved site RU84_07270 IPR036441 RU84_07270 RU84_07275 IPR001126 DNA-repair protein, UmuC-like RU84_07275 IPR017961 DNA polymerase, Y-family, little finger domain RU84_07275 IPR025188 Domain of unknown function DUF4113 RU84_07285 IPR001789 Signal transduction response regulator, receiver domain RU84_07285 IPR005561 ANTAR domain RU84_07285 IPR008327 Signal transduction response regulator, antiterminator RU84_07285 IPR011006 CheY-like superfamily RU84_07285 IPR036388 RU84_07285 RU84_07295 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RU84_07295 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site RU84_07295 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RU84_07295 IPR007419 BFD-like [2Fe-2S]-binding domain RU84_07295 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB RU84_07295 IPR017121 Nitrite reductase [NAD(P)H], large subunit RU84_07295 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_07295 IPR036136 RU84_07295 RU84_07295 IPR036188 RU84_07295 RU84_07300 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD RU84_07300 IPR016156 FAD/NAD-linked reductase, dimerisation domain RU84_07300 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_07300 IPR036188 RU84_07300 RU84_07300 IPR036922 RU84_07300 RU84_07305 IPR006656 Molybdopterin oxidoreductase RU84_07305 IPR006657 Molydopterin dinucleotide-binding domain RU84_07305 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RU84_07305 IPR007419 BFD-like [2Fe-2S]-binding domain RU84_07305 IPR009010 Aspartate decarboxylase-like domain RU84_07305 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RU84_07310 IPR013482 Molybdenum cofactor guanylyltransferase RU84_07310 IPR025877 MobA-like NTP transferase domain RU84_07310 IPR029044 Nucleotide-diphospho-sugar transferases RU84_07315 IPR006656 Molybdopterin oxidoreductase RU84_07315 IPR006657 Molydopterin dinucleotide-binding domain RU84_07315 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RU84_07315 IPR009010 Aspartate decarboxylase-like domain RU84_07320 IPR006638 Elongator protein 3/MiaB/NifB RU84_07320 IPR007197 Radical SAM RU84_07320 IPR010505 Molybdenum cofactor synthesis C-terminal RU84_07320 IPR013483 Molybdenum cofactor biosynthesis protein A RU84_07320 IPR013785 Aldolase-type TIM barrel RU84_07325 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RU84_07325 IPR012675 Beta-grasp domain RU84_07325 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RU84_07330 IPR003448 Molybdopterin biosynthesis MoaE RU84_07330 IPR036563 RU84_07330 RU84_07335 IPR001453 Molybdopterin binding domain RU84_07335 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain RU84_07335 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA RU84_07335 IPR036425 RU84_07335 RU84_07335 IPR036522 RU84_07335 RU84_07340 IPR001453 Molybdopterin binding domain RU84_07340 IPR005110 MoeA, N-terminal and linker domain RU84_07340 IPR005111 MoeA, C-terminal, domain IV RU84_07340 IPR036135 RU84_07340 RU84_07340 IPR036425 RU84_07340 RU84_07340 IPR036688 RU84_07340 RU84_07345 IPR002577 Helix-turn-helix, HxlR type RU84_07345 IPR036388 RU84_07345 RU84_07345 IPR036390 RU84_07345 RU84_07350 IPR000524 Transcription regulator HTH, GntR RU84_07350 IPR004839 Aminotransferase, class I/classII RU84_07350 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_07350 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_07350 IPR015424 Pyridoxal phosphate-dependent transferase RU84_07350 IPR036388 RU84_07350 RU84_07350 IPR036390 RU84_07350 RU84_07355 IPR000620 Drug/metabolite transporter RU84_07360 IPR007453 Sulphur transfer protein DsrC/TusE RU84_07360 IPR025526 DsrC-like domain RU84_07370 IPR027396 DsrEFH-like RU84_07375 IPR003787 Sulphur relay, DsrE/F-like protein RU84_07375 IPR017463 Sulphur relay, TusD/DsrE RU84_07375 IPR027396 DsrEFH-like RU84_07380 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RU84_07380 IPR036291 RU84_07380 RU84_07385 IPR000362 Fumarate lyase family RU84_07385 IPR005677 Fumarate hydratase, class II RU84_07385 IPR008948 L-Aspartase-like RU84_07385 IPR018951 Fumarase C, C-terminal RU84_07385 IPR020557 Fumarate lyase, conserved site RU84_07385 IPR022761 Fumarate lyase, N-terminal RU84_07385 IPR024083 Fumarase/histidase, N-terminal RU84_07405 IPR006076 FAD dependent oxidoreductase RU84_07405 IPR036188 RU84_07405 RU84_07415 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase RU84_07415 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site RU84_07415 IPR036571 RU84_07415 RU84_07420 IPR029021 Protein-tyrosine phosphatase-like RU84_07425 IPR002292 Ornithine/putrescine carbamoyltransferase RU84_07425 IPR006130 Aspartate/ornithine carbamoyltransferase RU84_07425 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RU84_07425 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RU84_07425 IPR024904 Ornithine carbamoyltransferase RU84_07425 IPR036901 RU84_07425 RU84_07430 IPR001647 DNA-binding HTH domain, TetR-type RU84_07430 IPR009057 Homeodomain-like RU84_07430 IPR036271 RU84_07430 RU84_07435 IPR001789 Signal transduction response regulator, receiver domain RU84_07435 IPR002078 RNA polymerase sigma factor 54 interaction domain RU84_07435 IPR002197 DNA binding HTH domain, Fis-type RU84_07435 IPR003593 AAA+ ATPase domain RU84_07435 IPR009057 Homeodomain-like RU84_07435 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) RU84_07435 IPR011006 CheY-like superfamily RU84_07435 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RU84_07435 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RU84_07435 IPR025944 Sigma-54 interaction domain, conserved site RU84_07435 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_07440 IPR000014 PAS domain RU84_07440 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_07440 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RU84_07440 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RU84_07440 IPR013767 PAS fold RU84_07440 IPR035965 RU84_07440 RU84_07440 IPR036097 RU84_07440 RU84_07440 IPR036890 RU84_07440 RU84_07445 IPR005839 Methylthiotransferase RU84_07445 IPR005840 Ribosomal protein S12 methylthiotransferase RimO RU84_07445 IPR006638 Elongator protein 3/MiaB/NifB RU84_07445 IPR007197 Radical SAM RU84_07445 IPR013848 Methylthiotransferase, N-terminal RU84_07445 IPR020612 Methylthiotransferase, conserved site RU84_07445 IPR023404 Radical SAM, alpha/beta horseshoe RU84_07445 IPR038135 RU84_07445 RU84_07450 IPR001048 Aspartate/glutamate/uridylate kinase RU84_07450 IPR011817 Uridylate kinase RU84_07450 IPR015963 Uridylate kinase, bacteria RU84_07450 IPR036393 RU84_07450 RU84_07455 IPR002661 Ribosome recycling factor RU84_07455 IPR023584 Ribosome recycling factor domain RU84_07455 IPR036191 RU84_07455 RU84_07460 IPR001441 Decaprenyl diphosphate synthase-like RU84_07460 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site RU84_07460 IPR036424 RU84_07460 RU84_07465 IPR000374 Phosphatidate cytidylyltransferase RU84_07470 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase RU84_07470 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal RU84_07470 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal RU84_07470 IPR026877 DXP reductoisomerase C-terminal domain RU84_07470 IPR036169 RU84_07470 RU84_07470 IPR036291 RU84_07470 RU84_07475 IPR001478 PDZ domain RU84_07475 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase RU84_07475 IPR008915 Peptidase M50 RU84_07475 IPR036034 RU84_07475 RU84_07480 IPR000184 Bacterial surface antigen (D15) RU84_07480 IPR010827 Surface antigen variable number RU84_07480 IPR023707 Outer membrane protein assembly factor BamA RU84_07485 IPR005632 Chaperone protein Skp RU84_07485 IPR024930 Skp domain RU84_07490 IPR001451 Bacterial transferase hexapeptide repeat RU84_07490 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase RU84_07490 IPR011004 Trimeric LpxA-like RU84_07490 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region RU84_07495 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ RU84_07495 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ RU84_07495 IPR029069 HotDog domain RU84_07500 IPR001451 Bacterial transferase hexapeptide repeat RU84_07500 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase RU84_07500 IPR011004 Trimeric LpxA-like RU84_07500 IPR018357 Hexapeptide transferase, conserved site RU84_07500 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal RU84_07500 IPR037157 RU84_07500 RU84_07505 IPR011990 Tetratricopeptide-like helical domain RU84_07505 IPR019734 Tetratricopeptide repeat RU84_07505 IPR032519 RU84_07505 RU84_07515 IPR003783 Regulatory protein RecX RU84_07515 IPR036388 RU84_07515 RU84_07520 IPR003593 AAA+ ATPase domain RU84_07520 IPR013765 DNA recombination and repair protein RecA RU84_07520 IPR020584 DNA recombination/repair protein RecA, conserved site RU84_07520 IPR023400 DNA recombination and repair protein RecA, C-terminal RU84_07520 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_07525 IPR002942 RNA-binding S4 domain RU84_07525 IPR025708 Heat shock protein 15 RU84_07525 IPR036986 RU84_07525 RU84_07530 IPR006439 HAD hydrolase, subfamily IA RU84_07530 IPR023214 HAD-like domain RU84_07530 IPR036412 RU84_07530 RU84_07535 IPR008617 Uncharacterised protein family, YcgJ RU84_07550 IPR000182 GNAT domain RU84_07550 IPR016181 Acyl-CoA N-acyltransferase RU84_07555 IPR000485 AsnC-type HTH domain RU84_07555 IPR011008 Dimeric alpha-beta barrel RU84_07555 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RU84_07555 IPR019887 Transcription regulator AsnC-type, C-terminal RU84_07555 IPR019888 Transcription regulator AsnC-type RU84_07555 IPR036388 RU84_07555 RU84_07555 IPR036390 RU84_07555 RU84_07560 IPR000192 Aminotransferase class V domain RU84_07560 IPR010111 Kynureninase RU84_07560 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_07560 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_07560 IPR015424 Pyridoxal phosphate-dependent transferase RU84_07565 IPR002293 Amino acid/polyamine transporter I RU84_07565 IPR004840 Amino acid permease, conserved site RU84_07565 IPR004841 Amino acid permease/ SLC12A domain RU84_07570 IPR013094 Alpha/beta hydrolase fold-3 RU84_07570 IPR029058 Alpha/Beta hydrolase fold RU84_07575 IPR000209 Peptidase S8/S53 domain RU84_07575 IPR010259 Proteinase inhibitor I9 RU84_07575 IPR015500 Peptidase S8, subtilisin-related RU84_07575 IPR022398 Peptidase S8, subtilisin, His-active site RU84_07575 IPR023827 Peptidase S8, subtilisin, Asp-active site RU84_07575 IPR023828 Peptidase S8, subtilisin, Ser-active site RU84_07575 IPR036852 RU84_07575 RU84_07575 IPR037045 RU84_07575 RU84_07580 IPR002645 STAS domain RU84_07580 IPR011547 Sulphate transporter RU84_07580 IPR018045 Sulphate anion transporter, conserved site RU84_07580 IPR036513 RU84_07580 RU84_07585 IPR003738 Protein of unknown function DUF159 RU84_07585 IPR036590 RU84_07585 RU84_07590 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase RU84_07590 IPR011042 Six-bladed beta-propeller, TolB-like RU84_07590 IPR012938 Glucose/Sorbosone dehydrogenase RU84_07590 IPR019893 PQQ-dependent dehydrogenase, s-GDH family RU84_07595 IPR006015 Universal stress protein A RU84_07595 IPR006016 UspA RU84_07595 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_07600 IPR000014 PAS domain RU84_07600 IPR000160 GGDEF domain RU84_07600 IPR001633 EAL domain RU84_07600 IPR013655 PAS fold-3 RU84_07600 IPR013656 PAS fold-4 RU84_07600 IPR029787 Nucleotide cyclase RU84_07600 IPR035919 RU84_07600 RU84_07600 IPR035965 RU84_07600 RU84_07610 IPR000835 MarR-type HTH domain RU84_07610 IPR036388 RU84_07610 RU84_07610 IPR036390 RU84_07610 RU84_07615 IPR013229 PEGA RU84_07620 IPR003352 Phosphotransferase system, EIIC RU84_07620 IPR003353 Phosphotransferase system, fructose-specific IIB subunit RU84_07620 IPR003501 Phosphotransferase system, EIIB component, type 2/3 RU84_07620 IPR006327 Phosphotransferase system, fructose IIC component RU84_07620 IPR036095 RU84_07620 RU84_07625 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RU84_07625 IPR011611 Carbohydrate kinase PfkB RU84_07625 IPR017583 Tagatose/fructose phosphokinase RU84_07625 IPR022463 Fructose 1-phosphate kinase RU84_07625 IPR029056 Ribokinase-like RU84_07630 IPR000032 Phosphocarrier HPr protein-like RU84_07630 IPR000121 PEP-utilising enzyme, C-terminal RU84_07630 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RU84_07630 IPR002178 PTS EIIA type-2 domain RU84_07630 IPR006318 Phosphoenolpyruvate-utilising enzyme RU84_07630 IPR008279 PEP-utilising enzyme, mobile domain RU84_07630 IPR008731 Phosphotransferase system, enzyme I N-terminal RU84_07630 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RU84_07630 IPR016152 Phosphotransferase/anion transporter RU84_07630 IPR018274 PEP-utilising enzyme, active site RU84_07630 IPR023151 PEP-utilising enzyme, conserved site RU84_07630 IPR035895 RU84_07630 RU84_07630 IPR036618 RU84_07630 RU84_07630 IPR036637 RU84_07630 RU84_07635 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 RU84_07635 IPR022742 Putative lysophospholipase RU84_07635 IPR029058 Alpha/Beta hydrolase fold RU84_07650 IPR005624 Domain of unknown function DUF336 RU84_07650 IPR038084 RU84_07650 RU84_07655 IPR004685 Branched-chain amino acid transport system II carrier protein RU84_07660 IPR000994 Peptidase M24, structural domain RU84_07660 IPR001714 Peptidase M24, methionine aminopeptidase RU84_07660 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 RU84_07660 IPR036005 RU84_07660 RU84_07665 IPR000847 Transcription regulator HTH, LysR RU84_07665 IPR005119 LysR, substrate-binding RU84_07665 IPR036388 RU84_07665 RU84_07665 IPR036390 RU84_07665 RU84_07675 IPR002109 Glutaredoxin RU84_07675 IPR004480 Monothiol glutaredoxin-related RU84_07675 IPR014434 Monothiol glutaredoxin RU84_07675 IPR036249 RU84_07675 RU84_07680 IPR004636 Acetylornithine/Succinylornithine transaminase family RU84_07680 IPR005814 Aminotransferase class-III RU84_07680 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_07680 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_07680 IPR015424 Pyridoxal phosphate-dependent transferase RU84_07685 IPR000644 CBS domain RU84_07690 IPR021284 Protein of unknown function DUF2750 RU84_07695 IPR011990 Tetratricopeptide-like helical domain RU84_07710 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RU84_07710 IPR003593 AAA+ ATPase domain RU84_07710 IPR004390 Signal-recognition particle receptor FtsY RU84_07710 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle RU84_07710 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_07710 IPR036225 RU84_07710 RU84_07715 IPR000415 Nitroreductase-like RU84_07715 IPR029479 Nitroreductase RU84_07720 IPR018635 Uncharacterised protein family UPF0319 RU84_07725 IPR011846 Cyd operon protein YbgE RU84_07730 IPR011724 Cyd operon protein YbgT RU84_07730 IPR012994 Membrane bound YbgT-like RU84_07735 IPR003317 Cytochrome d ubiquinol oxidase, subunit II RU84_07740 IPR002585 Cytochrome d ubiquinol oxidase, subunit I RU84_07750 IPR010840 Protein of unknown function DUF1449 RU84_07755 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RU84_07755 IPR036922 RU84_07755 RU84_07760 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RU84_07760 IPR011611 Carbohydrate kinase PfkB RU84_07760 IPR029056 Ribokinase-like RU84_07765 IPR000531 TonB-dependent receptor, beta-barrel RU84_07765 IPR010105 TonB-dependent siderophore receptor RU84_07765 IPR012910 TonB-dependent receptor, plug RU84_07765 IPR036942 RU84_07765 RU84_07765 IPR037066 RU84_07765 RU84_07770 IPR007863 Peptidase M16, C-terminal domain RU84_07770 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RU84_07770 IPR011765 Peptidase M16, N-terminal RU84_07770 IPR013578 Peptidase M16C associated RU84_07775 IPR003187 Phospholipase A1 RU84_07775 IPR036541 RU84_07775 RU84_07780 IPR003445 Cation transporter RU84_07780 IPR004772 Potassium uptake protein TrkH family RU84_07785 IPR003148 Regulator of K+ conductance, N-terminal RU84_07785 IPR036291 RU84_07785 RU84_07785 IPR036721 RU84_07785 RU84_07790 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RU84_07790 IPR001721 ACT-like domain RU84_07790 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RU84_07790 IPR005787 Threonine dehydratase, biosynthetic RU84_07790 IPR036052 RU84_07790 RU84_07790 IPR038110 RU84_07790 RU84_07795 IPR004788 Ribose 5-phosphate isomerase, type A RU84_07795 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup RU84_07795 IPR037171 RU84_07795 RU84_07800 IPR002725 Protein of unknown function DUF45 RU84_07810 IPR000534 Semialdehyde dehydrogenase, NAD-binding RU84_07810 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 RU84_07810 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RU84_07810 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site RU84_07810 IPR036291 RU84_07810 RU84_07820 IPR003769 Adaptor protein ClpS, core RU84_07820 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RU84_07820 IPR022935 ATP-dependent Clp protease adaptor protein ClpS RU84_07825 IPR001270 ClpA/B family RU84_07825 IPR003593 AAA+ ATPase domain RU84_07825 IPR003959 ATPase, AAA-type, core RU84_07825 IPR004176 Clp, N-terminal RU84_07825 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA RU84_07825 IPR018368 ClpA/B, conserved site 1 RU84_07825 IPR019489 Clp ATPase, C-terminal RU84_07825 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_07825 IPR028299 ClpA/B, conserved site 2 RU84_07825 IPR036628 RU84_07825 RU84_07830 IPR003844 Uncharacterised protein family UPF0060 RU84_07835 IPR006218 DAHP synthetase I/KDSA RU84_07835 IPR006219 DHAP synthase, class 1 RU84_07835 IPR013785 Aldolase-type TIM barrel RU84_07840 IPR000073 Alpha/beta hydrolase fold-1 RU84_07840 IPR029058 Alpha/Beta hydrolase fold RU84_07845 IPR005149 Transcription regulator PadR N-terminal RU84_07845 IPR018309 Transcription regulator PadR, C-terminal RU84_07845 IPR036388 RU84_07845 RU84_07845 IPR036390 RU84_07845 RU84_07850 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RU84_07850 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RU84_07850 IPR013785 Aldolase-type TIM barrel RU84_07850 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_07850 IPR036188 RU84_07850 RU84_07855 IPR032710 RU84_07855 RU84_07855 IPR037401 RU84_07855 RU84_07860 IPR013830 RU84_07860 RU84_07860 IPR036514 RU84_07860 RU84_07865 IPR012020 AB-hydrolase YheT, putative RU84_07865 IPR022742 Putative lysophospholipase RU84_07865 IPR029058 Alpha/Beta hydrolase fold RU84_07870 IPR016516 Uncharacterised conserved protein UCP07580 RU84_07880 IPR004468 CTP synthase RU84_07880 IPR017456 CTP synthase, N-terminal RU84_07880 IPR017926 Glutamine amidotransferase RU84_07880 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_07880 IPR029062 Class I glutamine amidotransferase-like RU84_07885 IPR006218 DAHP synthetase I/KDSA RU84_07885 IPR006269 3-deoxy-8-phosphooctulonate synthase RU84_07885 IPR013785 Aldolase-type TIM barrel RU84_07890 IPR000941 Enolase RU84_07890 IPR020809 Enolase, conserved site RU84_07890 IPR020810 Enolase, C-terminal RU84_07890 IPR020811 Enolase, N-terminal RU84_07890 IPR029017 Enolase N-terminal domain-like RU84_07890 IPR036849 RU84_07890 RU84_07895 IPR007353 Protein of unknown function DUF421 RU84_07895 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain RU84_07900 IPR007060 Septum formation initiator FtsL/DivIC RU84_07900 IPR023081 Cell division protein FtsB RU84_07905 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RU84_07905 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site RU84_07905 IPR029044 Nucleotide-diphospho-sugar transferases RU84_07905 IPR034683 RU84_07905 RU84_07910 IPR004163 Coenzyme A transferase binding site RU84_07910 IPR004165 Coenzyme A transferase family I RU84_07910 IPR012792 3-oxoacid CoA-transferase, subunit A RU84_07910 IPR037171 RU84_07910 RU84_07915 IPR004164 Coenzyme A transferase active site RU84_07915 IPR004165 Coenzyme A transferase family I RU84_07915 IPR012791 3-oxoacid CoA-transferase, subunit B RU84_07915 IPR037171 RU84_07915 RU84_07920 IPR002155 Thiolase RU84_07920 IPR012793 Beta-ketoadipyl CoA thiolase RU84_07920 IPR016039 Thiolase-like RU84_07920 IPR020610 Thiolase, active site RU84_07920 IPR020613 Thiolase, conserved site RU84_07920 IPR020615 Thiolase, acyl-enzyme intermediate active site RU84_07920 IPR020616 Thiolase, N-terminal RU84_07920 IPR020617 Thiolase, C-terminal RU84_07925 IPR000362 Fumarate lyase family RU84_07925 IPR008948 L-Aspartase-like RU84_07925 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase RU84_07925 IPR019468 Adenylosuccinate lyase C-terminal RU84_07925 IPR020557 Fumarate lyase, conserved site RU84_07925 IPR022761 Fumarate lyase, N-terminal RU84_07925 IPR024083 Fumarase/histidase, N-terminal RU84_07930 IPR000073 Alpha/beta hydrolase fold-1 RU84_07930 IPR026968 3-oxoadipate enol-lactonase 1/2 RU84_07930 IPR029058 Alpha/Beta hydrolase fold RU84_07935 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family RU84_07935 IPR005829 Sugar transporter, conserved site RU84_07935 IPR011701 Major facilitator superfamily RU84_07935 IPR036259 RU84_07935 RU84_07940 IPR003779 Carboxymuconolactone decarboxylase-like RU84_07940 IPR012788 4-carboxymuconolactone decarboxylase RU84_07940 IPR029032 AhpD-like RU84_07945 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal RU84_07945 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit RU84_07945 IPR015889 Intradiol ring-cleavage dioxygenase, core RU84_07945 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal RU84_07950 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal RU84_07950 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit RU84_07950 IPR015889 Intradiol ring-cleavage dioxygenase, core RU84_07955 IPR001381 Dehydroquinase class I RU84_07955 IPR013785 Aldolase-type TIM barrel RU84_07955 IPR018508 3-dehydroquinate dehydratase, active site RU84_07960 IPR006626 Parallel beta-helix repeat RU84_07960 IPR011050 Pectin lyase fold/virulence factor RU84_07960 IPR012334 Pectin lyase fold RU84_07960 IPR039448 RU84_07960 RU84_07965 IPR007049 Carbohydrate-selective porin OprB RU84_07965 IPR038673 RU84_07965 RU84_07970 IPR001479 Quinoprotein dehydrogenase, conserved site RU84_07970 IPR002372 Pyrrolo-quinoline quinone repeat RU84_07970 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily RU84_07970 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related RU84_07970 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RU84_07980 IPR007272 Sulphur transport domain RU84_07985 IPR007272 Sulphur transport domain RU84_07990 IPR001279 Beta-lactamase-like RU84_07990 IPR036866 RU84_07990 RU84_07995 IPR005471 Transcription regulator IclR, N-terminal RU84_07995 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR RU84_07995 IPR014757 Transcription regulator IclR, C-terminal RU84_07995 IPR029016 GAF domain-like RU84_07995 IPR036388 RU84_07995 RU84_07995 IPR036390 RU84_07995 RU84_08000 IPR000847 Transcription regulator HTH, LysR RU84_08000 IPR005119 LysR, substrate-binding RU84_08000 IPR036388 RU84_08000 RU84_08000 IPR036390 RU84_08000 RU84_08005 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_08005 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_08005 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_08005 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_08005 IPR036250 RU84_08005 RU84_08005 IPR037069 RU84_08005 RU84_08010 IPR002575 Aminoglycoside phosphotransferase RU84_08010 IPR011009 Protein kinase-like domain RU84_08015 IPR013078 Histidine phosphatase superfamily, clade-1 RU84_08015 IPR029033 Histidine phosphatase superfamily RU84_08020 IPR002347 Glucose/ribitol dehydrogenase RU84_08020 IPR036291 RU84_08020 RU84_08025 IPR005318 Outer membrane porin, bacterial RU84_08025 IPR023614 Porin domain RU84_08030 IPR011701 Major facilitator superfamily RU84_08030 IPR036259 RU84_08030 RU84_08035 IPR000835 MarR-type HTH domain RU84_08035 IPR036388 RU84_08035 RU84_08035 IPR036390 RU84_08035 RU84_08040 IPR020556 Amidase, conserved site RU84_08040 IPR023631 Amidase signature domain RU84_08040 IPR036928 RU84_08040 RU84_08045 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_08045 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RU84_08045 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_08045 IPR036250 RU84_08045 RU84_08045 IPR037069 RU84_08045 RU84_08055 IPR032710 RU84_08055 RU84_08055 IPR037401 RU84_08055 RU84_08060 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit RU84_08060 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RU84_08060 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RU84_08060 IPR036922 RU84_08060 RU84_08065 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit RU84_08065 IPR032710 RU84_08065 RU84_08070 IPR002347 Glucose/ribitol dehydrogenase RU84_08070 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_08070 IPR036291 RU84_08070 RU84_08075 IPR000951 Phthalate dioxygenase reductase RU84_08075 IPR001041 2Fe-2S ferredoxin-type domain RU84_08075 IPR001433 Oxidoreductase FAD/NAD(P)-binding RU84_08075 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RU84_08075 IPR008333 Oxidoreductase, FAD-binding domain RU84_08075 IPR012675 Beta-grasp domain RU84_08075 IPR017938 Riboflavin synthase-like beta-barrel RU84_08075 IPR036010 RU84_08075 RU84_08075 IPR039261 RU84_08075 RU84_08080 IPR002563 Flavin reductase-like, FMN-binding RU84_08080 IPR012349 FMN-binding split barrel RU84_08080 IPR036388 RU84_08080 RU84_08080 IPR036390 RU84_08080 RU84_08085 IPR009057 Homeodomain-like RU84_08085 IPR018060 DNA binding HTH domain, AraC-type RU84_08085 IPR020449 Transcription regulator HTH, AraC- type RU84_08085 IPR035418 RU84_08085 RU84_08090 IPR000269 Copper amine oxidase RU84_08090 IPR012854 Copper amine oxidase-like, N-terminal RU84_08090 IPR015798 Copper amine oxidase, C-terminal RU84_08090 IPR015800 Copper amine oxidase, N2-terminal RU84_08090 IPR015802 Copper amine oxidase, N3-terminal RU84_08090 IPR016182 Copper amine oxidase, N-terminal RU84_08090 IPR036460 RU84_08090 RU84_08090 IPR036582 RU84_08090 RU84_08100 IPR015590 Aldehyde dehydrogenase domain RU84_08100 IPR016161 Aldehyde/histidinol dehydrogenase RU84_08100 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_08100 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_08100 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RU84_08105 IPR000073 Alpha/beta hydrolase fold-1 RU84_08105 IPR026968 3-oxoadipate enol-lactonase 1/2 RU84_08105 IPR029058 Alpha/Beta hydrolase fold RU84_08110 IPR002155 Thiolase RU84_08110 IPR012793 Beta-ketoadipyl CoA thiolase RU84_08110 IPR016039 Thiolase-like RU84_08110 IPR020610 Thiolase, active site RU84_08110 IPR020613 Thiolase, conserved site RU84_08110 IPR020615 Thiolase, acyl-enzyme intermediate active site RU84_08110 IPR020616 Thiolase, N-terminal RU84_08110 IPR020617 Thiolase, C-terminal RU84_08115 IPR004164 Coenzyme A transferase active site RU84_08115 IPR004165 Coenzyme A transferase family I RU84_08115 IPR012791 3-oxoacid CoA-transferase, subunit B RU84_08115 IPR037171 RU84_08115 RU84_08120 IPR004163 Coenzyme A transferase binding site RU84_08120 IPR004165 Coenzyme A transferase family I RU84_08120 IPR012792 3-oxoacid CoA-transferase, subunit A RU84_08120 IPR037171 RU84_08120 RU84_08125 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal RU84_08125 IPR007535 Catechol dioxygenase, N-terminal RU84_08125 IPR012801 Catechol 1,2-dioxygenase, proteobacteria RU84_08125 IPR015889 Intradiol ring-cleavage dioxygenase, core RU84_08130 IPR003464 Muconolactone delta-isomerase RU84_08130 IPR011008 Dimeric alpha-beta barrel RU84_08130 IPR026029 Muconolactone isomerase domain RU84_08135 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RU84_08135 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RU84_08135 IPR013370 Muconate/chloromuconate cycloisomerase RU84_08135 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site RU84_08135 IPR029017 Enolase N-terminal domain-like RU84_08135 IPR029065 Enolase C-terminal domain-like RU84_08135 IPR036849 RU84_08135 RU84_08140 IPR000847 Transcription regulator HTH, LysR RU84_08140 IPR005119 LysR, substrate-binding RU84_08140 IPR036388 RU84_08140 RU84_08140 IPR036390 RU84_08140 RU84_08145 IPR010239 Conserved hypothetical protein CHP02001 RU84_08150 IPR000524 Transcription regulator HTH, GntR RU84_08150 IPR008920 Transcription regulator FadR/GntR, C-terminal RU84_08150 IPR011711 GntR, C-terminal RU84_08150 IPR036388 RU84_08150 RU84_08150 IPR036390 RU84_08150 RU84_08155 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RU84_08155 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RU84_08155 IPR037237 RU84_08155 RU84_08160 IPR011701 Major facilitator superfamily RU84_08160 IPR036259 RU84_08160 RU84_08165 IPR009645 Uncharacterised conserved protein GguC RU84_08165 IPR036663 RU84_08165 RU84_08170 IPR015590 Aldehyde dehydrogenase domain RU84_08170 IPR016161 Aldehyde/histidinol dehydrogenase RU84_08170 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_08170 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_08175 IPR023375 Acetoacetate decarboxylase beta barrel domain RU84_08180 IPR000073 Alpha/beta hydrolase fold-1 RU84_08180 IPR029058 Alpha/Beta hydrolase fold RU84_08185 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RU84_08185 IPR013785 Aldolase-type TIM barrel RU84_08190 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase RU84_08190 IPR036291 RU84_08190 RU84_08195 IPR002818 ThiJ/PfpI RU84_08195 IPR029062 Class I glutamine amidotransferase-like RU84_08200 IPR000551 MerR-type HTH domain RU84_08200 IPR009061 DNA binding domain, putative RU84_08205 IPR002818 ThiJ/PfpI RU84_08205 IPR029062 Class I glutamine amidotransferase-like RU84_08210 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_08210 IPR036188 RU84_08210 RU84_08215 IPR000944 Transcription regulator Rrf2-like RU84_08215 IPR030489 RU84_08215 RU84_08215 IPR036388 RU84_08215 RU84_08215 IPR036390 RU84_08215 RU84_08225 IPR001279 Beta-lactamase-like RU84_08225 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D RU84_08225 IPR036866 RU84_08225 RU84_08230 IPR001647 DNA-binding HTH domain, TetR-type RU84_08230 IPR009057 Homeodomain-like RU84_08230 IPR032551 RU84_08230 RU84_08230 IPR036271 RU84_08230 RU84_08235 IPR000847 Transcription regulator HTH, LysR RU84_08235 IPR005119 LysR, substrate-binding RU84_08235 IPR036388 RU84_08235 RU84_08235 IPR036390 RU84_08235 RU84_08240 IPR002347 Glucose/ribitol dehydrogenase RU84_08240 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_08240 IPR036291 RU84_08240 RU84_08245 IPR002347 Glucose/ribitol dehydrogenase RU84_08245 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_08245 IPR036291 RU84_08245 RU84_08250 IPR002347 Glucose/ribitol dehydrogenase RU84_08250 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_08250 IPR036291 RU84_08250 RU84_08255 IPR002539 MaoC-like domain RU84_08255 IPR029069 HotDog domain RU84_08260 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_08260 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_08260 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_08260 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_08260 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RU84_08260 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RU84_08260 IPR036250 RU84_08260 RU84_08260 IPR037069 RU84_08260 RU84_08265 IPR005017 Membrane protein, aromatic hydrocarbon degradation RU84_08270 IPR000873 AMP-dependent synthetase/ligase RU84_08270 IPR020845 AMP-binding, conserved site RU84_08270 IPR025110 AMP-binding enzyme C-terminal domain RU84_08275 IPR002657 Bile acid:sodium symporter RU84_08275 IPR038770 RU84_08275 RU84_08285 IPR001647 DNA-binding HTH domain, TetR-type RU84_08285 IPR009057 Homeodomain-like RU84_08305 IPR005618 Outer membrane protein, OmpW RU84_08305 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RU84_08315 IPR001584 Integrase, catalytic core RU84_08315 IPR012337 Ribonuclease H-like domain RU84_08315 IPR025246 Transposase IS30-like HTH domain RU84_08315 IPR036397 RU84_08315 RU84_08320 IPR001584 Integrase, catalytic core RU84_08320 IPR012337 Ribonuclease H-like domain RU84_08320 IPR025246 Transposase IS30-like HTH domain RU84_08320 IPR036397 RU84_08320 RU84_08330 IPR006680 Amidohydrolase 1 RU84_08330 IPR032466 RU84_08330 RU84_08335 IPR009827 Dicarboxylate carrier MatC N-terminal RU84_08340 IPR000524 Transcription regulator HTH, GntR RU84_08340 IPR011663 UbiC transcription regulator-associated RU84_08340 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RU84_08340 IPR036388 RU84_08340 RU84_08340 IPR036390 RU84_08340 RU84_08345 IPR005511 Senescence marker protein-30 (SMP-30) RU84_08345 IPR011042 Six-bladed beta-propeller, TolB-like RU84_08345 IPR013658 SMP-30/Gluconolactonase/LRE-like region RU84_08350 IPR011701 Major facilitator superfamily RU84_08350 IPR036259 RU84_08350 RU84_08355 IPR000847 Transcription regulator HTH, LysR RU84_08355 IPR005119 LysR, substrate-binding RU84_08355 IPR036388 RU84_08355 RU84_08355 IPR036390 RU84_08355 RU84_08360 IPR006750 Protein of unknown function DUF606 RU84_08365 IPR006750 Protein of unknown function DUF606 RU84_08370 IPR001343 Haemolysin-type calcium-binding repeat RU84_08370 IPR011049 Serralysin-like metalloprotease, C-terminal RU84_08370 IPR013783 Immunoglobulin-like fold RU84_08370 IPR018511 Hemolysin-type calcium-binding conserved site RU84_08370 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass RU84_08370 IPR022038 Bacterial Ig-like domain RU84_08375 IPR003997 RTX secretion protein D, Gram-negative bacteria RU84_08375 IPR039562 RU84_08375 RU84_08380 IPR011701 Major facilitator superfamily RU84_08380 IPR036259 RU84_08380 RU84_08385 IPR001647 DNA-binding HTH domain, TetR-type RU84_08385 IPR009057 Homeodomain-like RU84_08385 IPR036271 RU84_08385 RU84_08385 IPR039536 RU84_08385 RU84_08390 IPR015590 Aldehyde dehydrogenase domain RU84_08390 IPR016161 Aldehyde/histidinol dehydrogenase RU84_08390 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_08390 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_08395 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RU84_08395 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RU84_08395 IPR037237 RU84_08395 RU84_08400 IPR011234 Fumarylacetoacetase, C-terminal-related RU84_08400 IPR036663 RU84_08400 RU84_08405 IPR000847 Transcription regulator HTH, LysR RU84_08405 IPR005119 LysR, substrate-binding RU84_08405 IPR036388 RU84_08405 RU84_08405 IPR036390 RU84_08405 RU84_08410 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RU84_08410 IPR036291 RU84_08410 RU84_08415 IPR011701 Major facilitator superfamily RU84_08415 IPR036259 RU84_08415 RU84_08420 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RU84_08420 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RU84_08420 IPR013328 Dehydrogenase, multihelical RU84_08420 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type RU84_08420 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RU84_08420 IPR036291 RU84_08420 RU84_08425 IPR009057 Homeodomain-like RU84_08425 IPR009594 Transcription regulator HTH, AraC, N-terminal RU84_08425 IPR018060 DNA binding HTH domain, AraC-type RU84_08425 IPR018062 HTH domain AraC-type, conserved site RU84_08430 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RU84_08430 IPR011032 GroES (chaperonin 10)-like RU84_08430 IPR013149 Alcohol dehydrogenase, C-terminal RU84_08430 IPR013154 Alcohol dehydrogenase GroES-like RU84_08430 IPR020843 Polyketide synthase, enoylreductase RU84_08430 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RU84_08430 IPR036291 RU84_08430 RU84_08435 IPR002491 ABC transporter periplasmic binding domain RU84_08440 IPR000522 ABC transporter, permease protein RU84_08440 IPR037294 RU84_08440 RU84_08445 IPR003439 ABC transporter-like RU84_08445 IPR003593 AAA+ ATPase domain RU84_08445 IPR017871 ABC transporter, conserved site RU84_08445 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_08450 IPR000182 GNAT domain RU84_08450 IPR016181 Acyl-CoA N-acyltransferase RU84_08455 IPR003313 AraC-type arabinose-binding/dimerisation domain RU84_08455 IPR009057 Homeodomain-like RU84_08455 IPR011051 RmlC-like cupin domain RU84_08455 IPR014710 RmlC-like jelly roll fold RU84_08455 IPR018060 DNA binding HTH domain, AraC-type RU84_08460 IPR002781 Transmembrane protein TauE like RU84_08465 IPR000836 Phosphoribosyltransferase domain RU84_08465 IPR029057 Phosphoribosyltransferase-like RU84_08470 IPR007229 Nicotinate phosphoribosyltransferase family RU84_08470 IPR013785 Aldolase-type TIM barrel RU84_08470 IPR016471 Nicotinamide phosphoribosyl transferase RU84_08470 IPR036068 RU84_08470 RU84_08475 IPR000086 NUDIX hydrolase domain RU84_08475 IPR015797 NUDIX hydrolase domain-like RU84_08475 IPR036388 RU84_08475 RU84_08475 IPR036390 RU84_08475 RU84_08480 IPR003171 Methylenetetrahydrofolate reductase RU84_08480 IPR022026 Methylene-tetrahydrofolate reductase C-terminal RU84_08480 IPR029041 FAD-linked oxidoreductase-like RU84_08485 IPR039562 RU84_08485 RU84_08490 IPR004638 Drug resistance transporter EmrB/QacA subfamily RU84_08490 IPR011701 Major facilitator superfamily RU84_08490 IPR036259 RU84_08490 RU84_08500 IPR004993 GH3 auxin-responsive promoter RU84_08510 IPR016181 Acyl-CoA N-acyltransferase RU84_08515 IPR002828 Survival protein SurE-like phosphatase/nucleotidase RU84_08515 IPR036523 RU84_08515 RU84_08525 IPR003607 HD/PDEase domain RU84_08530 IPR001387 Cro/C1-type helix-turn-helix domain RU84_08530 IPR010982 Lambda repressor-like, DNA-binding domain RU84_08535 IPR001647 DNA-binding HTH domain, TetR-type RU84_08535 IPR009057 Homeodomain-like RU84_08540 IPR010359 Protein of unknown function DUF955 RU84_08540 IPR010982 Lambda repressor-like, DNA-binding domain RU84_08550 IPR000182 GNAT domain RU84_08550 IPR016181 Acyl-CoA N-acyltransferase RU84_08555 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RU84_08555 IPR029058 Alpha/Beta hydrolase fold RU84_08560 IPR000847 Transcription regulator HTH, LysR RU84_08560 IPR005119 LysR, substrate-binding RU84_08560 IPR036388 RU84_08560 RU84_08560 IPR036390 RU84_08560 RU84_08565 IPR002347 Glucose/ribitol dehydrogenase RU84_08565 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_08565 IPR036291 RU84_08565 RU84_08570 IPR002347 Glucose/ribitol dehydrogenase RU84_08570 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_08570 IPR036291 RU84_08570 RU84_08575 IPR022742 Putative lysophospholipase RU84_08575 IPR029058 Alpha/Beta hydrolase fold RU84_08580 IPR009057 Homeodomain-like RU84_08580 IPR018060 DNA binding HTH domain, AraC-type RU84_08580 IPR032687 RU84_08580 RU84_08590 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_08590 IPR003660 HAMP linker domain RU84_08590 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RU84_08590 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RU84_08590 IPR036097 RU84_08590 RU84_08590 IPR036890 RU84_08590 RU84_08595 IPR001789 Signal transduction response regulator, receiver domain RU84_08595 IPR001867 Signal transduction response regulator, C-terminal RU84_08595 IPR011006 CheY-like superfamily RU84_08595 IPR016032 Signal transduction response regulator, C-terminal effector RU84_08595 IPR036388 RU84_08595 RU84_08600 IPR006143 RND efflux pump, membrane fusion protein RU84_08600 IPR032317 RU84_08600 RU84_08605 IPR001036 Acriflavin resistance protein RU84_08605 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 RU84_08605 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RU84_08610 IPR003439 ABC transporter-like RU84_08610 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_08620 IPR000847 Transcription regulator HTH, LysR RU84_08620 IPR005119 LysR, substrate-binding RU84_08620 IPR036388 RU84_08620 RU84_08620 IPR036390 RU84_08620 RU84_08625 IPR004163 Coenzyme A transferase binding site RU84_08625 IPR004165 Coenzyme A transferase family I RU84_08625 IPR012792 3-oxoacid CoA-transferase, subunit A RU84_08625 IPR037171 RU84_08625 RU84_08630 IPR004164 Coenzyme A transferase active site RU84_08630 IPR004165 Coenzyme A transferase family I RU84_08630 IPR012791 3-oxoacid CoA-transferase, subunit B RU84_08630 IPR037171 RU84_08630 RU84_08635 IPR006160 Short chain fatty acid transporter AtoE RU84_08640 IPR002155 Thiolase RU84_08640 IPR016039 Thiolase-like RU84_08640 IPR020610 Thiolase, active site RU84_08640 IPR020615 Thiolase, acyl-enzyme intermediate active site RU84_08640 IPR020616 Thiolase, N-terminal RU84_08640 IPR020617 Thiolase, C-terminal RU84_08645 IPR000847 Transcription regulator HTH, LysR RU84_08645 IPR005119 LysR, substrate-binding RU84_08645 IPR036388 RU84_08645 RU84_08645 IPR036390 RU84_08645 RU84_08650 IPR000847 Transcription regulator HTH, LysR RU84_08650 IPR005119 LysR, substrate-binding RU84_08650 IPR036388 RU84_08650 RU84_08650 IPR036390 RU84_08650 RU84_08665 IPR000362 Fumarate lyase family RU84_08665 IPR008948 L-Aspartase-like RU84_08665 IPR018951 Fumarase C, C-terminal RU84_08665 IPR020557 Fumarate lyase, conserved site RU84_08665 IPR022761 Fumarate lyase, N-terminal RU84_08665 IPR024083 Fumarase/histidase, N-terminal RU84_08670 IPR000531 TonB-dependent receptor, beta-barrel RU84_08670 IPR010105 TonB-dependent siderophore receptor RU84_08670 IPR010917 TonB-dependent receptor, conserved site RU84_08670 IPR012910 TonB-dependent receptor, plug RU84_08670 IPR036942 RU84_08670 RU84_08670 IPR037066 RU84_08670 RU84_08675 IPR005828 General substrate transporter RU84_08675 IPR005829 Sugar transporter, conserved site RU84_08675 IPR011701 Major facilitator superfamily RU84_08675 IPR036259 RU84_08675 RU84_08680 IPR010376 Domain of unknown function, DUF971 RU84_08680 IPR038492 RU84_08680 RU84_08690 IPR003439 ABC transporter-like RU84_08690 IPR003593 AAA+ ATPase domain RU84_08690 IPR017871 ABC transporter, conserved site RU84_08690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_08695 IPR000515 MetI-like domain RU84_08695 IPR035906 RU84_08695 RU84_08705 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RU84_08710 IPR003953 FAD binding domain RU84_08710 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RU84_08710 IPR036188 RU84_08710 RU84_08710 IPR037099 RU84_08710 RU84_08715 IPR000524 Transcription regulator HTH, GntR RU84_08715 IPR011663 UbiC transcription regulator-associated RU84_08715 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RU84_08715 IPR036388 RU84_08715 RU84_08715 IPR036390 RU84_08715 RU84_08720 IPR003370 Chromate transporter RU84_08720 IPR014047 Chromate transporter, long chain RU84_08725 IPR003680 Flavodoxin-like fold RU84_08725 IPR023048 NADH-azoreductase, FMN-dependent RU84_08725 IPR029039 Flavoprotein-like RU84_08730 IPR002577 Helix-turn-helix, HxlR type RU84_08730 IPR036388 RU84_08730 RU84_08730 IPR036390 RU84_08730 RU84_08735 IPR009057 Homeodomain-like RU84_08735 IPR018060 DNA binding HTH domain, AraC-type RU84_08735 IPR018062 HTH domain AraC-type, conserved site RU84_08740 IPR000620 Drug/metabolite transporter RU84_08745 IPR001342 Homoserine dehydrogenase, catalytic RU84_08745 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RU84_08745 IPR022697 Homoserine dehydrogenase lacking ACT domain RU84_08745 IPR036291 RU84_08745 RU84_08750 IPR002781 Transmembrane protein TauE like RU84_08755 IPR005939 Beta-lactamase hydrolase-like RU84_08755 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_08755 IPR029021 Protein-tyrosine phosphatase-like RU84_08755 IPR036188 RU84_08755 RU84_08760 IPR001279 Beta-lactamase-like RU84_08760 IPR036866 RU84_08760 RU84_08765 IPR002078 RNA polymerase sigma factor 54 interaction domain RU84_08765 IPR002197 DNA binding HTH domain, Fis-type RU84_08765 IPR003593 AAA+ ATPase domain RU84_08765 IPR009057 Homeodomain-like RU84_08765 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RU84_08765 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RU84_08765 IPR025944 Sigma-54 interaction domain, conserved site RU84_08765 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_08770 IPR021134 Bestrophin/UPF0187 RU84_08775 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RU84_08775 IPR011032 GroES (chaperonin 10)-like RU84_08775 IPR013149 Alcohol dehydrogenase, C-terminal RU84_08775 IPR013154 Alcohol dehydrogenase GroES-like RU84_08775 IPR020843 Polyketide synthase, enoylreductase RU84_08775 IPR036291 RU84_08775 RU84_08780 IPR002347 Glucose/ribitol dehydrogenase RU84_08780 IPR014007 Acetoin reductase RU84_08780 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_08780 IPR036291 RU84_08780 RU84_08785 IPR001100 RU84_08785 RU84_08785 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RU84_08785 IPR006258 Dihydrolipoamide dehydrogenase RU84_08785 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RU84_08785 IPR016156 FAD/NAD-linked reductase, dimerisation domain RU84_08785 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_08785 IPR036188 RU84_08785 RU84_08790 IPR000089 Biotin/lipoyl attachment RU84_08790 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RU84_08790 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RU84_08790 IPR004167 E3 binding RU84_08790 IPR011053 Single hybrid motif RU84_08790 IPR023213 Chloramphenicol acetyltransferase-like domain RU84_08790 IPR036625 RU84_08790 RU84_08795 IPR005475 Transketolase-like, pyrimidine-binding domain RU84_08795 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RU84_08795 IPR029061 Thiamin diphosphate-binding fold RU84_08795 IPR033248 RU84_08795 RU84_08800 IPR001017 Dehydrogenase, E1 component RU84_08800 IPR029061 Thiamin diphosphate-binding fold RU84_08805 IPR003698 Lipoyl synthase RU84_08805 IPR006638 Elongator protein 3/MiaB/NifB RU84_08805 IPR007197 Radical SAM RU84_08805 IPR013785 Aldolase-type TIM barrel RU84_08810 IPR029016 GAF domain-like RU84_08810 IPR036388 RU84_08810 RU84_08815 IPR016084 Haem oxygenase-like, multi-helical RU84_08820 IPR000160 GGDEF domain RU84_08820 IPR029787 Nucleotide cyclase RU84_08825 IPR000453 Chorismate synthase RU84_08825 IPR020541 Chorismate synthase, conserved site RU84_08825 IPR035904 RU84_08825 RU84_08830 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RU84_08830 IPR004556 Modification methylase HemK RU84_08830 IPR007848 Methyltransferase small domain RU84_08830 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase RU84_08830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_08835 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RU84_08835 IPR006653 Tryptophan synthase, beta chain, conserved site RU84_08835 IPR006654 Tryptophan synthase, beta chain RU84_08835 IPR023026 Tryptophan synthase beta chain/beta chain-like RU84_08835 IPR036052 RU84_08835 RU84_08850 IPR000093 DNA recombination protein RecR RU84_08850 IPR006171 Toprim domain RU84_08850 IPR015967 Recombination protein RecR, conserved site RU84_08850 IPR023627 Recombination protein RecR RU84_08850 IPR023628 Recombination protein RecR, C4-type zinc finger RU84_08855 IPR004401 Nucleoid-associated protein YbaB RU84_08855 IPR036894 RU84_08855 RU84_08865 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RU84_08865 IPR006234 O-succinylhomoserine sulfhydrylase RU84_08865 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_08865 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_08865 IPR015424 Pyridoxal phosphate-dependent transferase RU84_08870 IPR000073 Alpha/beta hydrolase fold-1 RU84_08870 IPR029058 Alpha/Beta hydrolase fold RU84_08875 IPR013216 Methyltransferase type 11 RU84_08875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_08895 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RU84_08895 IPR011057 Mss4-like RU84_08900 IPR025582 YARHG domain RU84_08905 IPR001310 Histidine triad (HIT) protein RU84_08905 IPR036265 RU84_08905 RU84_08910 IPR023614 Porin domain RU84_08915 IPR009282 Protein of unknown function DUF937 RU84_08915 IPR027405 YidB-like RU84_08925 IPR021246 Protein of unknown function DUF2797 RU84_08940 IPR003439 ABC transporter-like RU84_08940 IPR003593 AAA+ ATPase domain RU84_08940 IPR017871 ABC transporter, conserved site RU84_08940 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_08945 IPR039562 RU84_08945 RU84_08950 IPR001647 DNA-binding HTH domain, TetR-type RU84_08950 IPR009057 Homeodomain-like RU84_08950 IPR015292 Transcription regulator YbiH, C-terminal RU84_08950 IPR036271 RU84_08950 RU84_08955 IPR003835 Glycosyl transferase, family 19 RU84_08960 IPR000531 TonB-dependent receptor, beta-barrel RU84_08960 IPR010105 TonB-dependent siderophore receptor RU84_08960 IPR012910 TonB-dependent receptor, plug RU84_08960 IPR036942 RU84_08960 RU84_08960 IPR037066 RU84_08960 RU84_08970 IPR005625 PepSY-associated TM helix RU84_08980 IPR002781 Transmembrane protein TauE like RU84_08985 IPR006218 DAHP synthetase I/KDSA RU84_08985 IPR006219 DHAP synthase, class 1 RU84_08985 IPR013785 Aldolase-type TIM barrel RU84_08990 IPR003805 Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase RU84_08995 IPR000560 Histidine phosphatase superfamily, clade-2 RU84_08995 IPR029033 Histidine phosphatase superfamily RU84_09000 IPR013078 Histidine phosphatase superfamily, clade-1 RU84_09000 IPR029033 Histidine phosphatase superfamily RU84_09005 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like RU84_09005 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic RU84_09005 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal RU84_09005 IPR036087 RU84_09005 RU84_09010 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase RU84_09010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_09015 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RU84_09020 IPR006439 HAD hydrolase, subfamily IA RU84_09020 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RU84_09020 IPR013118 Mannitol dehydrogenase, C-terminal RU84_09020 IPR013328 Dehydrogenase, multihelical RU84_09020 IPR023198 Phosphoglycolate phosphatase, domain 2 RU84_09020 IPR023214 HAD-like domain RU84_09020 IPR036412 RU84_09020 RU84_09025 IPR016181 Acyl-CoA N-acyltransferase RU84_09025 IPR019432 Siderophore biosynthesis protein, conserved domain RU84_09035 IPR005625 PepSY-associated TM helix RU84_09045 IPR000531 TonB-dependent receptor, beta-barrel RU84_09045 IPR012910 TonB-dependent receptor, plug RU84_09045 IPR036942 RU84_09045 RU84_09045 IPR037066 RU84_09045 RU84_09050 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase RU84_09050 IPR036704 RU84_09050 RU84_09055 IPR024726 Ferric iron reductase, C-terminal RU84_09060 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal RU84_09060 IPR022770 Ferric iron reductase FhuF domain RU84_09065 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal RU84_09065 IPR022770 Ferric iron reductase FhuF domain RU84_09070 IPR004638 Drug resistance transporter EmrB/QacA subfamily RU84_09070 IPR011701 Major facilitator superfamily RU84_09070 IPR036259 RU84_09070 RU84_09075 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase RU84_09075 IPR036188 RU84_09075 RU84_09080 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal RU84_09080 IPR022770 Ferric iron reductase FhuF domain RU84_09085 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RU84_09085 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RU84_09085 IPR036754 RU84_09085 RU84_09095 IPR004147 UbiB domain RU84_09095 IPR011009 Protein kinase-like domain RU84_09100 IPR006089 Acyl-CoA dehydrogenase, conserved site RU84_09100 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_09100 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_09100 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_09100 IPR036250 RU84_09100 RU84_09100 IPR037069 RU84_09100 RU84_09105 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_09105 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_09105 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_09105 IPR036250 RU84_09105 RU84_09105 IPR037069 RU84_09105 RU84_09110 IPR005804 Fatty acid desaturase, type 1 RU84_09115 IPR009057 Homeodomain-like RU84_09115 IPR011051 RmlC-like cupin domain RU84_09115 IPR018060 DNA binding HTH domain, AraC-type RU84_09115 IPR020449 Transcription regulator HTH, AraC- type RU84_09115 IPR032783 RU84_09115 RU84_09120 IPR027304 Trigger factor/SurA domain RU84_09125 IPR000119 Histone-like bacterial DNA-binding protein RU84_09125 IPR010992 Integration host factor (IHF)-like DNA-binding domain RU84_09125 IPR020816 Histone-like DNA-binding protein, conserved site RU84_09130 IPR008769 Poly granule associated RU84_09140 IPR000944 Transcription regulator Rrf2-like RU84_09140 IPR030489 RU84_09140 RU84_09140 IPR036388 RU84_09140 RU84_09140 IPR036390 RU84_09140 RU84_09145 IPR000192 Aminotransferase class V domain RU84_09145 IPR010240 Cysteine desulfurase RU84_09145 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_09145 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_09145 IPR015424 Pyridoxal phosphate-dependent transferase RU84_09145 IPR016454 Cysteine desulfurase, NifS RU84_09145 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site RU84_09150 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal RU84_09150 IPR011339 ISC system FeS cluster assembly, IscU scaffold RU84_09155 IPR000361 FeS cluster biogenesis RU84_09155 IPR011302 ISC system FeS cluster assembly, IscA scaffold RU84_09155 IPR016092 FeS cluster insertion protein RU84_09155 IPR017870 FeS cluster insertion, C-terminal, conserved site RU84_09155 IPR035903 RU84_09155 RU84_09160 IPR001623 DnaJ domain RU84_09160 IPR004640 Co-chaperone Hsc20 RU84_09160 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain RU84_09160 IPR036386 RU84_09160 RU84_09160 IPR036869 RU84_09160 RU84_09165 IPR010236 ISC system FeS cluster assembly, HscA chaperone RU84_09165 IPR013126 Heat shock protein 70 family RU84_09165 IPR018181 Heat shock protein 70, conserved site RU84_09165 IPR029047 Heat shock protein 70kD, peptide-binding domain RU84_09165 IPR029048 Heat shock protein 70kD, C-terminal domain RU84_09170 IPR001041 2Fe-2S ferredoxin-type domain RU84_09170 IPR001055 Adrenodoxin RU84_09170 IPR011536 Ferredoxin, 2Fe-2S type RU84_09170 IPR012675 Beta-grasp domain RU84_09170 IPR018298 Adrenodoxin, iron-sulphur binding site RU84_09170 IPR036010 RU84_09170 RU84_09175 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase RU84_09175 IPR029787 Nucleotide cyclase RU84_09180 IPR001310 Histidine triad (HIT) protein RU84_09180 IPR026026 Histidine triad hydrolase, Hint-type RU84_09180 IPR036265 RU84_09180 RU84_09185 IPR001650 Helicase, C-terminal RU84_09185 IPR003711 CarD-like/TRCF domain RU84_09185 IPR004576 Transcription-repair coupling factor RU84_09185 IPR005118 Transcription-repair-coupling factor, C-terminal domain RU84_09185 IPR011545 DEAD/DEAH box helicase domain RU84_09185 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RU84_09185 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_09185 IPR036101 RU84_09185 RU84_09185 IPR037235 RU84_09185 RU84_09195 IPR006314 Dyp-type peroxidase RU84_09195 IPR011008 Dimeric alpha-beta barrel RU84_09200 IPR004045 Glutathione S-transferase, N-terminal RU84_09200 IPR036249 RU84_09200 RU84_09205 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase RU84_09205 IPR010203 Regulator of ribonuclease activity A RU84_09205 IPR036704 RU84_09205 RU84_09210 IPR000534 Semialdehyde dehydrogenase, NAD-binding RU84_09210 IPR036291 RU84_09210 RU84_09215 IPR002583 Ribosomal protein S20 RU84_09215 IPR036510 RU84_09215 RU84_09220 IPR013078 Histidine phosphatase superfamily, clade-1 RU84_09220 IPR029033 Histidine phosphatase superfamily RU84_09225 IPR000760 Inositol monophosphatase RU84_09225 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial RU84_09225 IPR020583 Inositol monophosphatase, metal-binding site RU84_09235 IPR003738 Protein of unknown function DUF159 RU84_09235 IPR036590 RU84_09235 RU84_09240 IPR003439 ABC transporter-like RU84_09240 IPR003593 AAA+ ATPase domain RU84_09240 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RU84_09240 IPR017871 ABC transporter, conserved site RU84_09240 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_09245 IPR000515 MetI-like domain RU84_09245 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RU84_09245 IPR035906 RU84_09245 RU84_09250 IPR000515 MetI-like domain RU84_09250 IPR035906 RU84_09250 RU84_09255 IPR001567 Peptidase M3A/M3B RU84_09255 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RU84_09260 IPR000914 Bacterial extracellular solute-binding protein, family 5 RU84_09260 IPR030678 RU84_09260 RU84_09265 IPR000914 Bacterial extracellular solute-binding protein, family 5 RU84_09265 IPR030678 RU84_09265 RU84_09270 IPR000531 TonB-dependent receptor, beta-barrel RU84_09270 IPR012910 TonB-dependent receptor, plug RU84_09270 IPR037066 RU84_09270 RU84_09275 IPR003538 Gram-negative bacterial TonB protein RU84_09275 IPR006260 TonB, C-terminal RU84_09275 IPR037682 RU84_09275 RU84_09280 IPR002898 MotA/TolQ/ExbB proton channel RU84_09285 IPR003400 Biopolymer transport protein ExbD/TolR RU84_09290 IPR003400 Biopolymer transport protein ExbD/TolR RU84_09295 IPR001465 Malate synthase RU84_09295 IPR006253 Malate synthase G RU84_09295 IPR011076 Malate synthase-like RU84_09295 IPR023310 Malate synthase G, beta sub-domain RU84_09300 IPR005654 ATPase, AFG1-like RU84_09300 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_09300 IPR030870 RU84_09300 RU84_09305 IPR009057 Homeodomain-like RU84_09305 IPR018060 DNA binding HTH domain, AraC-type RU84_09305 IPR032687 RU84_09305 RU84_09310 IPR020946 Flavin monooxygenase-like RU84_09310 IPR036188 RU84_09310 RU84_09315 IPR005642 Protein of unknown function DUF340, prokaryotic membrane RU84_09320 IPR001754 Orotidine 5'-phosphate decarboxylase domain RU84_09320 IPR011060 Ribulose-phosphate binding barrel RU84_09320 IPR013785 Aldolase-type TIM barrel RU84_09320 IPR014732 Orotidine 5'-phosphate decarboxylase RU84_09320 IPR018089 Orotidine 5'-phosphate decarboxylase, active site RU84_09325 IPR010445 Protein of unknown function DUF1049 RU84_09330 IPR000119 Histone-like bacterial DNA-binding protein RU84_09330 IPR005685 Integration host factor, beta subunit RU84_09330 IPR010992 Integration host factor (IHF)-like DNA-binding domain RU84_09330 IPR020816 Histone-like DNA-binding protein, conserved site RU84_09335 IPR000110 Ribosomal protein S1 RU84_09335 IPR003029 Ribosomal protein S1, RNA-binding domain RU84_09335 IPR012340 Nucleic acid-binding, OB-fold RU84_09335 IPR022967 RNA-binding domain, S1 RU84_09340 IPR003136 Cytidylate kinase RU84_09340 IPR011994 Cytidylate kinase domain RU84_09340 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_09345 IPR019587 Polyketide cyclase/dehydrase RU84_09345 IPR023393 START-like domain RU84_09350 IPR016192 APOBEC/CMP deaminase, zinc-binding RU84_09350 IPR016193 Cytidine deaminase-like RU84_09350 IPR028883 tRNA-specific adenosine deaminase RU84_09355 IPR029045 ClpP/crotonase-like domain RU84_09355 IPR032259 RU84_09355 RU84_09360 IPR002043 Uracil-DNA glycosylase RU84_09360 IPR005122 Uracil-DNA glycosylase-like RU84_09360 IPR018085 Uracil-DNA glycosylase, active site RU84_09360 IPR036895 RU84_09360 RU84_09365 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RU84_09365 IPR038418 RU84_09365 RU84_09370 IPR005628 General secretion pathway protein K RU84_09370 IPR038072 RU84_09370 RU84_09375 IPR010055 Type II secretion system protein J RU84_09375 IPR012902 Prokaryotic N-terminal methylation site RU84_09380 IPR003413 Type II secretion system protein I domain RU84_09380 IPR010052 Type II secretion system protein I RU84_09380 IPR012902 Prokaryotic N-terminal methylation site RU84_09385 IPR002416 Type II secretion system protein H RU84_09385 IPR012902 Prokaryotic N-terminal methylation site RU84_09390 IPR001647 DNA-binding HTH domain, TetR-type RU84_09390 IPR009057 Homeodomain-like RU84_09395 IPR001130 TatD family RU84_09395 IPR015991 Uncharacterised deoxyribonuclease TatD-type RU84_09395 IPR018228 Deoxyribonuclease, TatD-related, conserved site RU84_09395 IPR032466 RU84_09395 RU84_09400 IPR009875 PilZ domain RU84_09405 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_09410 IPR003329 Acylneuraminate cytidylyltransferase RU84_09410 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase RU84_09410 IPR029044 Nucleotide-diphospho-sugar transferases RU84_09415 IPR003758 Tetraacyldisaccharide 4'-kinase RU84_09415 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_09420 IPR003439 ABC transporter-like RU84_09420 IPR003593 AAA+ ATPase domain RU84_09420 IPR011527 ABC transporter type 1, transmembrane domain RU84_09420 IPR011917 ABC transporter, lipid A export, MsbA RU84_09420 IPR017871 ABC transporter, conserved site RU84_09420 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_09420 IPR036640 RU84_09420 RU84_09425 IPR003400 Biopolymer transport protein ExbD/TolR RU84_09430 IPR002898 MotA/TolQ/ExbB proton channel RU84_09435 IPR003115 ParB/Sulfiredoxin RU84_09435 IPR004437 ParB/RepB/Spo0J partition protein family RU84_09435 IPR036086 RU84_09435 RU84_09440 IPR025669 AAA domain RU84_09440 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_09445 IPR003682 rRNA small subunit methyltransferase G RU84_09445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_09450 IPR005835 Nucleotidyl transferase RU84_09450 IPR029044 Nucleotide-diphospho-sugar transferases RU84_09455 IPR002575 Aminoglycoside phosphotransferase RU84_09455 IPR011009 Protein kinase-like domain RU84_09460 IPR005653 Organic solvent tolerance-like, N-terminal RU84_09460 IPR007543 Organic solvent tolerance protein, C-terminal RU84_09460 IPR020889 Lipopolysaccharide assembly, LptD RU84_09465 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RU84_09465 IPR015391 SurA N-terminal RU84_09465 IPR023034 Peptidyl-prolyl isomerase SurA RU84_09465 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RU84_09465 IPR027304 Trigger factor/SurA domain RU84_09470 IPR000771 Ketose-bisphosphate aldolase, class-II RU84_09470 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype RU84_09470 IPR013785 Aldolase-type TIM barrel RU84_09480 IPR001576 Phosphoglycerate kinase RU84_09480 IPR015824 Phosphoglycerate kinase, N-terminal RU84_09480 IPR015911 Phosphoglycerate kinase, conserved site RU84_09480 IPR036043 RU84_09480 RU84_09485 IPR018714 Protein of unknown function DUF2237 RU84_09490 IPR003697 Maf-like protein RU84_09490 IPR029001 Inosine triphosphate pyrophosphatase-like RU84_09495 IPR003347 JmjC domain RU84_09500 IPR001647 DNA-binding HTH domain, TetR-type RU84_09500 IPR009057 Homeodomain-like RU84_09500 IPR036271 RU84_09500 RU84_09505 IPR001845 HTH ArsR-type DNA-binding domain RU84_09505 IPR036388 RU84_09505 RU84_09505 IPR036390 RU84_09505 RU84_09510 IPR001991 Sodium:dicarboxylate symporter RU84_09510 IPR023025 Serine/threonine transporter SstT RU84_09510 IPR036458 RU84_09510 RU84_09515 IPR010699 Protein of unknown function DUF1275 RU84_09520 IPR018636 Protein of unknown function DUF2058 RU84_09525 IPR003439 ABC transporter-like RU84_09525 IPR003593 AAA+ ATPase domain RU84_09525 IPR011527 ABC transporter type 1, transmembrane domain RU84_09525 IPR017871 ABC transporter, conserved site RU84_09525 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_09525 IPR036640 RU84_09525 RU84_09530 IPR002539 MaoC-like domain RU84_09530 IPR029069 HotDog domain RU84_09535 IPR009057 Homeodomain-like RU84_09535 IPR018060 DNA binding HTH domain, AraC-type RU84_09535 IPR020449 Transcription regulator HTH, AraC- type RU84_09535 IPR032687 RU84_09535 RU84_09540 IPR002930 Glycine cleavage system H-protein RU84_09540 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RU84_09540 IPR011053 Single hybrid motif RU84_09540 IPR017453 Glycine cleavage system H-protein, subgroup RU84_09540 IPR033753 RU84_09540 RU84_09545 IPR003000 Sirtuin family RU84_09545 IPR026591 Sirtuin family, catalytic core small domain RU84_09545 IPR029035 DHS-like NAD/FAD-binding domain RU84_09550 IPR001734 Sodium/solute symporter RU84_09550 IPR011851 Sodium/proline symporter RU84_09550 IPR018212 Sodium/solute symporter, conserved site RU84_09550 IPR038377 RU84_09550 RU84_09555 IPR000485 AsnC-type HTH domain RU84_09555 IPR011008 Dimeric alpha-beta barrel RU84_09555 IPR019887 Transcription regulator AsnC-type, C-terminal RU84_09555 IPR019888 Transcription regulator AsnC-type RU84_09555 IPR036388 RU84_09555 RU84_09555 IPR036390 RU84_09555 RU84_09560 IPR002872 Proline dehydrogenase domain RU84_09560 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 RU84_09560 IPR015590 Aldehyde dehydrogenase domain RU84_09560 IPR016160 Aldehyde dehydrogenase, cysteine active site RU84_09560 IPR016161 Aldehyde/histidinol dehydrogenase RU84_09560 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_09560 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_09560 IPR024082 Proline dehydrogenase PutA, domain II RU84_09560 IPR024089 Proline dehydrogenase PutA, domain I/II RU84_09560 IPR025703 Bifunctional protein PutA RU84_09560 IPR029041 FAD-linked oxidoreductase-like RU84_09565 IPR007344 GrpB/Dephospho-CoA kinase RU84_09570 IPR010280 (Uracil-5)-methyltransferase family RU84_09570 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA RU84_09570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_09570 IPR030390 RU84_09570 RU84_09570 IPR030391 RU84_09570 RU84_09580 IPR018711 Domain of unknown function DUF2233 RU84_09585 IPR007053 LRAT-like domain RU84_09590 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RU84_09590 IPR036761 RU84_09590 RU84_09595 IPR003718 OsmC/Ohr family RU84_09595 IPR015946 K homology domain-like, alpha/beta RU84_09595 IPR036102 RU84_09595 RU84_09600 IPR005474 Transketolase, N-terminal RU84_09600 IPR005475 Transketolase-like, pyrimidine-binding domain RU84_09600 IPR005478 Transketolase, bacterial-like RU84_09600 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RU84_09600 IPR020826 Transketolase binding site RU84_09600 IPR029061 Thiamin diphosphate-binding fold RU84_09600 IPR033248 RU84_09600 RU84_09605 IPR002133 S-adenosylmethionine synthetase RU84_09605 IPR022628 S-adenosylmethionine synthetase, N-terminal RU84_09605 IPR022629 S-adenosylmethionine synthetase, central domain RU84_09605 IPR022630 S-adenosylmethionine synthetase, C-terminal RU84_09605 IPR022631 S-adenosylmethionine synthetase, conserved site RU84_09605 IPR022636 S-adenosylmethionine synthetase superfamily RU84_09620 IPR007313 FxsA cytoplasmic membrane protein RU84_09625 IPR001460 Penicillin-binding protein, transpeptidase RU84_09625 IPR012338 Beta-lactamase/transpeptidase-like RU84_09630 IPR016181 Acyl-CoA N-acyltransferase RU84_09635 IPR001387 Cro/C1-type helix-turn-helix domain RU84_09635 IPR010982 Lambda repressor-like, DNA-binding domain RU84_09635 IPR011051 RmlC-like cupin domain RU84_09635 IPR014710 RmlC-like jelly roll fold RU84_09640 IPR002176 Crossover junction endodeoxyribonuclease RuvC RU84_09640 IPR012337 Ribonuclease H-like domain RU84_09640 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site RU84_09640 IPR036397 RU84_09640 RU84_09645 IPR000631 YjeF C-terminal domain RU84_09645 IPR004443 YjeF N-terminal domain RU84_09645 IPR017953 Carbohydrate kinase, predicted, conserved site RU84_09645 IPR029056 Ribokinase-like RU84_09645 IPR030677 RU84_09645 RU84_09645 IPR036652 RU84_09645 RU84_09650 IPR004453 Epoxyqueuosine reductase QueG RU84_09650 IPR009051 Alpha-helical ferredoxin RU84_09650 IPR013542 Domain of unknown function DUF1730 RU84_09650 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RU84_09655 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB RU84_09655 IPR006638 Elongator protein 3/MiaB/NifB RU84_09655 IPR007197 Radical SAM RU84_09655 IPR010722 Biotin and thiamin synthesis-associated domain RU84_09655 IPR013785 Aldolase-type TIM barrel RU84_09655 IPR024177 Biotin synthase RU84_09670 IPR008966 Adhesion domain RU84_09670 IPR036937 RU84_09670 RU84_09670 IPR039458 RU84_09670 RU84_09675 IPR001829 Pili assembly chaperone, bacterial RU84_09675 IPR008962 PapD-like RU84_09675 IPR013783 Immunoglobulin-like fold RU84_09675 IPR016147 PapD, N-terminal, bacterial RU84_09675 IPR016148 Pili assembly chaperone, C-terminal domain RU84_09675 IPR018046 Pili assembly chaperone, conserved site RU84_09675 IPR036316 RU84_09675 RU84_09680 IPR000015 Outer membrane usher protein RU84_09680 IPR025885 PapC, N-terminal domain RU84_09680 IPR025949 PapC-like, C-terminal domain RU84_09680 IPR037224 RU84_09680 RU84_09685 IPR000259 Fimbrial-type adhesion domain RU84_09685 IPR008966 Adhesion domain RU84_09685 IPR036937 RU84_09685 RU84_09695 IPR000847 Transcription regulator HTH, LysR RU84_09695 IPR005119 LysR, substrate-binding RU84_09695 IPR036388 RU84_09695 RU84_09695 IPR036390 RU84_09695 RU84_09700 IPR000620 Drug/metabolite transporter RU84_09710 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin RU84_09710 IPR026030 Purine-cytosine permease RU84_09710 IPR038271 RU84_09710 RU84_09720 IPR000847 Transcription regulator HTH, LysR RU84_09720 IPR005119 LysR, substrate-binding RU84_09720 IPR036388 RU84_09720 RU84_09720 IPR036390 RU84_09720 RU84_09725 IPR002104 Integrase, catalytic RU84_09725 IPR010998 Integrase, Lambda-type, N-terminal RU84_09725 IPR011010 DNA breaking-rejoining enzyme, catalytic core RU84_09725 IPR013762 Integrase-like, catalytic core RU84_09735 IPR016084 Haem oxygenase-like, multi-helical RU84_09740 IPR001584 Integrase, catalytic core RU84_09740 IPR012337 Ribonuclease H-like domain RU84_09740 IPR025246 Transposase IS30-like HTH domain RU84_09740 IPR036397 RU84_09740 RU84_09745 IPR036271 RU84_09745 RU84_09750 IPR002123 Phospholipid/glycerol acyltransferase RU84_09755 IPR002876 Transcriptional regulator TACO1-like RU84_09755 IPR017856 Integrase, N-terminal zinc-binding domain-like RU84_09755 IPR026564 Transcriptional regulator TACO1-like, domain 3 RU84_09755 IPR029072 YebC-like RU84_09760 IPR011008 Dimeric alpha-beta barrel RU84_09760 IPR019887 Transcription regulator AsnC-type, C-terminal RU84_09760 IPR019888 Transcription regulator AsnC-type RU84_09760 IPR036388 RU84_09760 RU84_09760 IPR036390 RU84_09760 RU84_09770 IPR003439 ABC transporter-like RU84_09770 IPR003593 AAA+ ATPase domain RU84_09770 IPR017871 ABC transporter, conserved site RU84_09770 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_09770 IPR030679 RU84_09770 RU84_09775 IPR000515 MetI-like domain RU84_09775 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RU84_09775 IPR035906 RU84_09775 RU84_09780 IPR000515 MetI-like domain RU84_09780 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RU84_09780 IPR035906 RU84_09780 RU84_09785 IPR001638 Extracellular solute-binding protein, family 3 RU84_09790 IPR004045 Glutathione S-transferase, N-terminal RU84_09790 IPR004046 Glutathione S-transferase, C-terminal RU84_09790 IPR036249 RU84_09790 RU84_09790 IPR036282 RU84_09790 RU84_09795 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_09795 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_09795 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RU84_09795 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_09795 IPR023922 Sulphate-starvation-induced SfnB RU84_09795 IPR036250 RU84_09795 RU84_09795 IPR037069 RU84_09795 RU84_09800 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_09800 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RU84_09800 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_09800 IPR023922 Sulphate-starvation-induced SfnB RU84_09800 IPR036250 RU84_09800 RU84_09800 IPR037069 RU84_09800 RU84_09805 IPR011251 Luciferase-like domain RU84_09805 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A RU84_09805 IPR036661 RU84_09805 RU84_09810 IPR004872 Lipoprotein NlpA family RU84_09815 IPR004872 Lipoprotein NlpA family RU84_09820 IPR003439 ABC transporter-like RU84_09820 IPR003593 AAA+ ATPase domain RU84_09820 IPR017871 ABC transporter, conserved site RU84_09820 IPR018449 NIL domain RU84_09820 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_09825 IPR000515 MetI-like domain RU84_09825 IPR035906 RU84_09825 RU84_09830 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 RU84_09830 IPR006073 GTP binding domain RU84_09830 IPR012675 Beta-grasp domain RU84_09830 IPR012676 TGS-like RU84_09830 IPR013029 Domain of unknown function DUF933 RU84_09830 IPR023192 TGS-like domain RU84_09830 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_09835 IPR009305 Protein of unknown function DUF962 RU84_09840 IPR000595 Cyclic nucleotide-binding domain RU84_09840 IPR012318 Helix-turn-helix motif, Crp-type RU84_09840 IPR014710 RmlC-like jelly roll fold RU84_09840 IPR018490 Cyclic nucleotide-binding-like RU84_09840 IPR036388 RU84_09840 RU84_09840 IPR036390 RU84_09840 RU84_09855 IPR011606 Branched-chain amino acid transport, permease RU84_09860 IPR008407 Branched-chain amino acid transport, AzlD RU84_09865 IPR014347 Tautomerase/MIF superfamily RU84_09865 IPR037479 RU84_09865 RU84_09870 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RU84_09870 IPR005862 Phosphoribosylglycinamide formyltransferase 2 RU84_09870 IPR011054 Rudiment single hybrid motif RU84_09870 IPR013815 ATP-grasp fold, subdomain 1 RU84_09870 IPR016185 Pre-ATP-grasp domain RU84_09875 IPR002934 Nucleotidyl transferase domain RU84_09875 IPR003607 HD/PDEase domain RU84_09875 IPR006674 HD domain RU84_09875 IPR010043 Protein-PII uridylyltransferase RU84_09875 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase RU84_09880 IPR001584 Integrase, catalytic core RU84_09880 IPR012337 Ribonuclease H-like domain RU84_09880 IPR025246 Transposase IS30-like HTH domain RU84_09880 IPR036397 RU84_09880 RU84_09890 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RU84_09895 IPR003313 AraC-type arabinose-binding/dimerisation domain RU84_09895 IPR009057 Homeodomain-like RU84_09895 IPR018060 DNA binding HTH domain, AraC-type RU84_09895 IPR018062 HTH domain AraC-type, conserved site RU84_09895 IPR020449 Transcription regulator HTH, AraC- type RU84_09895 IPR037923 RU84_09895 RU84_09900 IPR000889 Glutathione peroxidase RU84_09900 IPR029759 Glutathione peroxidase active site RU84_09900 IPR029760 Glutathione peroxidase conserved site RU84_09900 IPR036249 RU84_09900 RU84_09905 IPR002579 Peptide methionine sulphoxide reductase MrsB RU84_09905 IPR011057 Mss4-like RU84_09910 IPR004839 Aminotransferase, class I/classII RU84_09910 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_09910 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_09910 IPR015424 Pyridoxal phosphate-dependent transferase RU84_09915 IPR001991 Sodium:dicarboxylate symporter RU84_09915 IPR036458 RU84_09915 RU84_09920 IPR004550 L-asparaginase, type II RU84_09920 IPR006034 Asparaginase/glutaminase RU84_09920 IPR020827 Asparaginase/glutaminase, active site 1 RU84_09920 IPR027473 L-asparaginase, C-terminal domain RU84_09920 IPR027474 L-asparaginase, N-terminal RU84_09920 IPR027475 Asparaginase/glutaminase, active site 2 RU84_09920 IPR036152 RU84_09920 RU84_09920 IPR037152 RU84_09920 RU84_09925 IPR003141 Polymerase/histidinol phosphatase, N-terminal RU84_09925 IPR004013 PHP, C-terminal RU84_09925 IPR004805 DNA polymerase III, alpha subunit RU84_09925 IPR011708 Bacterial DNA polymerase III, alpha subunit RU84_09925 IPR016195 Polymerase/histidinol phosphatase-like RU84_09925 IPR029460 DNA polymerase, helix-hairpin-helix motif RU84_09930 IPR001537 tRNA/rRNA methyltransferase, SpoU type RU84_09930 IPR004384 RNA methyltransferase TrmH, group 1 RU84_09930 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RU84_09930 IPR029028 Alpha/beta knot methyltransferases RU84_09935 IPR001451 Bacterial transferase hexapeptide repeat RU84_09935 IPR005881 Serine O-acetyltransferase RU84_09935 IPR010493 Serine acetyltransferase, N-terminal RU84_09935 IPR011004 Trimeric LpxA-like RU84_09940 IPR011990 Tetratricopeptide-like helical domain RU84_09945 IPR029058 Alpha/Beta hydrolase fold RU84_09950 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RU84_09950 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RU84_09950 IPR012081 Alkyl hydroperoxide reductase subunit F RU84_09950 IPR012336 Thioredoxin-like fold RU84_09950 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_09950 IPR036188 RU84_09950 RU84_09950 IPR036249 RU84_09950 RU84_09955 IPR003370 Chromate transporter RU84_09955 IPR018181 Heat shock protein 70, conserved site RU84_09960 IPR003370 Chromate transporter RU84_09965 IPR000847 Transcription regulator HTH, LysR RU84_09965 IPR005119 LysR, substrate-binding RU84_09965 IPR036388 RU84_09965 RU84_09965 IPR036390 RU84_09965 RU84_09970 IPR002657 Bile acid:sodium symporter RU84_09970 IPR004706 Arsenical-resistance protein ACR3 RU84_09970 IPR038770 RU84_09970 RU84_09975 IPR001845 HTH ArsR-type DNA-binding domain RU84_09975 IPR036388 RU84_09975 RU84_09975 IPR036390 RU84_09975 RU84_09980 IPR006659 Arsenate reductase RU84_09980 IPR006660 Arsenate reductase-like RU84_09980 IPR036249 RU84_09980 RU84_09985 IPR009872 Protein of unknown function DUF1427 RU84_09985 IPR020017 XapX domain RU84_09990 IPR011059 Metal-dependent hydrolase, composite domain RU84_09990 IPR013108 Amidohydrolase 3 RU84_09990 IPR032466 RU84_09990 RU84_09995 IPR000868 Isochorismatase-like RU84_09995 IPR036380 RU84_09995 RU84_10000 IPR000847 Transcription regulator HTH, LysR RU84_10000 IPR005119 LysR, substrate-binding RU84_10000 IPR036388 RU84_10000 RU84_10000 IPR036390 RU84_10000 RU84_10005 IPR000524 Transcription regulator HTH, GntR RU84_10005 IPR008920 Transcription regulator FadR/GntR, C-terminal RU84_10005 IPR011711 GntR, C-terminal RU84_10005 IPR036388 RU84_10005 RU84_10005 IPR036390 RU84_10005 RU84_10010 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin RU84_10010 IPR038271 RU84_10010 RU84_10015 IPR015942 Asp/Glu/hydantoin racemase RU84_10020 IPR003819 Taurine catabolism dioxygenase TauD/TfdA RU84_10025 IPR000515 MetI-like domain RU84_10025 IPR035906 RU84_10025 RU84_10030 IPR003439 ABC transporter-like RU84_10030 IPR003593 AAA+ ATPase domain RU84_10030 IPR017871 ABC transporter, conserved site RU84_10030 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_10035 IPR001638 Extracellular solute-binding protein, family 3 RU84_10035 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain RU84_10035 IPR010068 Taurine ABC transporter, periplasmic binding protein TauA RU84_10040 IPR036709 RU84_10040 RU84_10045 IPR005828 General substrate transporter RU84_10045 IPR036259 RU84_10045 RU84_10050 IPR011251 Luciferase-like domain RU84_10050 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A RU84_10050 IPR036661 RU84_10050 RU84_10055 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_10055 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RU84_10055 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_10055 IPR036250 RU84_10055 RU84_10055 IPR037069 RU84_10055 RU84_10065 IPR002585 Cytochrome d ubiquinol oxidase, subunit I RU84_10070 IPR003317 Cytochrome d ubiquinol oxidase, subunit II RU84_10080 IPR000524 Transcription regulator HTH, GntR RU84_10080 IPR004839 Aminotransferase, class I/classII RU84_10080 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_10080 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_10080 IPR015424 Pyridoxal phosphate-dependent transferase RU84_10080 IPR036388 RU84_10080 RU84_10080 IPR036390 RU84_10080 RU84_10085 IPR000847 Transcription regulator HTH, LysR RU84_10085 IPR005119 LysR, substrate-binding RU84_10085 IPR036388 RU84_10085 RU84_10085 IPR036390 RU84_10085 RU84_10090 IPR004691 Malonate/sodium symporter MadM subunit RU84_10090 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal RU84_10095 IPR004690 Malonate transporter MadL subunit RU84_10100 IPR001227 Acyl transferase domain RU84_10100 IPR014043 Acyl transferase RU84_10100 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RU84_10100 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RU84_10100 IPR017554 Malonate decarboxylase, McdH subunit RU84_10100 IPR020801 Polyketide synthase, acyl transferase domain RU84_10100 IPR024925 Malonyl CoA-acyl carrier protein transacylase RU84_10105 IPR017557 Phosphoribosyl-dephospho-CoA transferase RU84_10110 IPR009648 Malonate decarboxylase gamma subunit RU84_10110 IPR029045 ClpP/crotonase-like domain RU84_10115 IPR017556 Malonate decarboxylase, beta subunit RU84_10115 IPR029045 ClpP/crotonase-like domain RU84_10115 IPR034733 RU84_10115 RU84_10120 IPR009662 Malonate decarboxylase delta subunit RU84_10120 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein RU84_10125 IPR002736 Triphosphoribosyl-dephospho-CoA protein RU84_10125 IPR017555 Triphosphoribosyl-dephospho-CoA synthase RU84_10130 IPR005777 Malonate decarboxylase, alpha subunit RU84_10130 IPR037171 RU84_10130 RU84_10135 IPR000847 Transcription regulator HTH, LysR RU84_10135 IPR005119 LysR, substrate-binding RU84_10135 IPR036388 RU84_10135 RU84_10135 IPR036390 RU84_10135 RU84_10140 IPR011051 RmlC-like cupin domain RU84_10140 IPR014710 RmlC-like jelly roll fold RU84_10140 IPR025979 ChrR-like cupin domain RU84_10145 IPR011701 Major facilitator superfamily RU84_10145 IPR036259 RU84_10145 RU84_10150 IPR000182 GNAT domain RU84_10150 IPR016181 Acyl-CoA N-acyltransferase RU84_10155 IPR007396 Transcriptional regulator PAI 2-type RU84_10155 IPR012349 FMN-binding split barrel RU84_10160 IPR000524 Transcription regulator HTH, GntR RU84_10160 IPR004839 Aminotransferase, class I/classII RU84_10160 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_10160 IPR015424 Pyridoxal phosphate-dependent transferase RU84_10160 IPR036388 RU84_10160 RU84_10160 IPR036390 RU84_10160 RU84_10165 IPR007300 CidB/LrgB family RU84_10170 IPR005538 LrgA/CidA family RU84_10175 IPR000847 Transcription regulator HTH, LysR RU84_10175 IPR005119 LysR, substrate-binding RU84_10175 IPR036388 RU84_10175 RU84_10175 IPR036390 RU84_10175 RU84_10180 IPR004045 Glutathione S-transferase, N-terminal RU84_10180 IPR034338 RU84_10180 RU84_10180 IPR036249 RU84_10180 RU84_10180 IPR036282 RU84_10180 RU84_10185 IPR004045 Glutathione S-transferase, N-terminal RU84_10185 IPR004046 Glutathione S-transferase, C-terminal RU84_10185 IPR036249 RU84_10185 RU84_10185 IPR036282 RU84_10185 RU84_10190 IPR000847 Transcription regulator HTH, LysR RU84_10190 IPR005119 LysR, substrate-binding RU84_10190 IPR036388 RU84_10190 RU84_10190 IPR036390 RU84_10190 RU84_10195 IPR002347 Glucose/ribitol dehydrogenase RU84_10195 IPR036291 RU84_10195 RU84_10200 IPR001584 Integrase, catalytic core RU84_10200 IPR012337 Ribonuclease H-like domain RU84_10200 IPR025246 Transposase IS30-like HTH domain RU84_10200 IPR036397 RU84_10200 RU84_10205 IPR001763 Rhodanese-like domain RU84_10205 IPR036873 RU84_10205 RU84_10210 IPR001451 Bacterial transferase hexapeptide repeat RU84_10210 IPR005881 Serine O-acetyltransferase RU84_10210 IPR010493 Serine acetyltransferase, N-terminal RU84_10210 IPR011004 Trimeric LpxA-like RU84_10220 IPR000192 Aminotransferase class V domain RU84_10220 IPR010970 Cysteine desulfurase, SufS RU84_10220 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_10220 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_10220 IPR015424 Pyridoxal phosphate-dependent transferase RU84_10225 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RU84_10230 IPR000847 Transcription regulator HTH, LysR RU84_10230 IPR005119 LysR, substrate-binding RU84_10230 IPR036388 RU84_10230 RU84_10230 IPR036390 RU84_10230 RU84_10235 IPR001638 Extracellular solute-binding protein, family 3 RU84_10235 IPR018313 Extracellular solute-binding protein, family 3, conserved site RU84_10240 IPR001638 Extracellular solute-binding protein, family 3 RU84_10245 IPR003439 ABC transporter-like RU84_10245 IPR003593 AAA+ ATPase domain RU84_10245 IPR017871 ABC transporter, conserved site RU84_10245 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_10245 IPR030679 RU84_10245 RU84_10250 IPR000515 MetI-like domain RU84_10250 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RU84_10250 IPR035906 RU84_10250 RU84_10255 IPR000515 MetI-like domain RU84_10255 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RU84_10255 IPR035906 RU84_10255 RU84_10260 IPR016181 Acyl-CoA N-acyltransferase RU84_10260 IPR031165 RU84_10260 RU84_10265 IPR000792 Transcription regulator LuxR, C-terminal RU84_10265 IPR001789 Signal transduction response regulator, receiver domain RU84_10265 IPR011006 CheY-like superfamily RU84_10265 IPR016032 Signal transduction response regulator, C-terminal effector RU84_10265 IPR036388 RU84_10265 RU84_10270 IPR001789 Signal transduction response regulator, receiver domain RU84_10270 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_10270 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RU84_10270 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RU84_10270 IPR011006 CheY-like superfamily RU84_10270 IPR036097 RU84_10270 RU84_10270 IPR036890 RU84_10270 RU84_10270 IPR038271 RU84_10270 RU84_10275 IPR038271 RU84_10275 RU84_10280 IPR000485 AsnC-type HTH domain RU84_10280 IPR011008 Dimeric alpha-beta barrel RU84_10280 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RU84_10280 IPR019887 Transcription regulator AsnC-type, C-terminal RU84_10280 IPR019888 Transcription regulator AsnC-type RU84_10280 IPR036388 RU84_10280 RU84_10280 IPR036390 RU84_10280 RU84_10285 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RU84_10290 IPR015927 Peptidase S24/S26A/S26B/S26C RU84_10290 IPR036286 RU84_10290 RU84_10300 IPR017956 AT hook, DNA-binding motif RU84_10300 IPR019626 Stress-induced protein, KGG, repeat RU84_10305 IPR001584 Integrase, catalytic core RU84_10305 IPR012337 Ribonuclease H-like domain RU84_10305 IPR025246 Transposase IS30-like HTH domain RU84_10305 IPR036397 RU84_10305 RU84_10315 IPR002347 Glucose/ribitol dehydrogenase RU84_10315 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_10315 IPR036291 RU84_10315 RU84_10320 IPR002226 Catalase haem-binding site RU84_10320 IPR010582 Catalase immune-responsive domain RU84_10320 IPR011614 Catalase core domain RU84_10320 IPR018028 Catalase, mono-functional, haem-containing RU84_10320 IPR020835 Catalase-like domain RU84_10320 IPR024712 Catalase, mono-functional, haem-containing, clade 2 RU84_10320 IPR029062 Class I glutamine amidotransferase-like RU84_10320 IPR037060 RU84_10320 RU84_10325 IPR016084 Haem oxygenase-like, multi-helical RU84_10330 IPR008136 CinA, C-terminal RU84_10330 IPR036653 RU84_10330 RU84_10365 IPR000847 Transcription regulator HTH, LysR RU84_10365 IPR005119 LysR, substrate-binding RU84_10365 IPR036388 RU84_10365 RU84_10365 IPR036390 RU84_10365 RU84_10370 IPR013830 RU84_10370 RU84_10370 IPR036514 RU84_10370 RU84_10375 IPR023614 Porin domain RU84_10380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_10385 IPR000873 AMP-dependent synthetase/ligase RU84_10385 IPR020845 AMP-binding, conserved site RU84_10385 IPR025110 AMP-binding enzyme C-terminal domain RU84_10390 IPR001647 DNA-binding HTH domain, TetR-type RU84_10390 IPR009057 Homeodomain-like RU84_10390 IPR036271 RU84_10390 RU84_10395 IPR006089 Acyl-CoA dehydrogenase, conserved site RU84_10395 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_10395 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_10395 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_10395 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_10395 IPR036250 RU84_10395 RU84_10395 IPR037069 RU84_10395 RU84_10400 IPR029045 ClpP/crotonase-like domain RU84_10400 IPR034733 RU84_10400 RU84_10405 IPR001753 Crotonase superfamily RU84_10405 IPR014748 Crontonase, C-terminal RU84_10405 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RU84_10405 IPR029045 ClpP/crotonase-like domain RU84_10410 IPR000089 Biotin/lipoyl attachment RU84_10410 IPR001882 Biotin-binding site RU84_10410 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RU84_10410 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal RU84_10410 IPR005482 Biotin carboxylase, C-terminal RU84_10410 IPR011053 Single hybrid motif RU84_10410 IPR011054 Rudiment single hybrid motif RU84_10410 IPR016185 Pre-ATP-grasp domain RU84_10415 IPR000891 Pyruvate carboxyltransferase RU84_10415 IPR013785 Aldolase-type TIM barrel RU84_10420 IPR000847 Transcription regulator HTH, LysR RU84_10420 IPR005119 LysR, substrate-binding RU84_10420 IPR036388 RU84_10420 RU84_10420 IPR036390 RU84_10420 RU84_10425 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain RU84_10425 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RU84_10425 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain RU84_10425 IPR029061 Thiamin diphosphate-binding fold RU84_10430 IPR029069 HotDog domain RU84_10435 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_10435 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_10435 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_10435 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_10435 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RU84_10435 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RU84_10435 IPR036250 RU84_10435 RU84_10435 IPR037069 RU84_10435 RU84_10440 IPR003736 Phenylacetic acid degradation-related domain RU84_10440 IPR006683 Thioesterase superfamily RU84_10440 IPR029069 HotDog domain RU84_10445 IPR011701 Major facilitator superfamily RU84_10445 IPR036259 RU84_10445 RU84_10455 IPR004164 Coenzyme A transferase active site RU84_10455 IPR004165 Coenzyme A transferase family I RU84_10455 IPR012791 3-oxoacid CoA-transferase, subunit B RU84_10455 IPR037171 RU84_10455 RU84_10460 IPR004165 Coenzyme A transferase family I RU84_10460 IPR012792 3-oxoacid CoA-transferase, subunit A RU84_10460 IPR037171 RU84_10460 RU84_10465 IPR005829 Sugar transporter, conserved site RU84_10465 IPR011701 Major facilitator superfamily RU84_10465 IPR036259 RU84_10465 RU84_10470 IPR006089 Acyl-CoA dehydrogenase, conserved site RU84_10470 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_10470 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_10470 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_10470 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_10470 IPR036250 RU84_10470 RU84_10470 IPR037069 RU84_10470 RU84_10475 IPR001753 Crotonase superfamily RU84_10475 IPR014748 Crontonase, C-terminal RU84_10475 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RU84_10475 IPR029045 ClpP/crotonase-like domain RU84_10480 IPR002347 Glucose/ribitol dehydrogenase RU84_10480 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_10480 IPR036291 RU84_10480 RU84_10485 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RU84_10485 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RU84_10485 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RU84_10485 IPR036291 RU84_10485 RU84_10490 IPR002155 Thiolase RU84_10490 IPR016039 Thiolase-like RU84_10490 IPR020610 Thiolase, active site RU84_10490 IPR020613 Thiolase, conserved site RU84_10490 IPR020615 Thiolase, acyl-enzyme intermediate active site RU84_10490 IPR020616 Thiolase, N-terminal RU84_10490 IPR020617 Thiolase, C-terminal RU84_10495 IPR005471 Transcription regulator IclR, N-terminal RU84_10495 IPR014757 Transcription regulator IclR, C-terminal RU84_10495 IPR029016 GAF domain-like RU84_10495 IPR036388 RU84_10495 RU84_10495 IPR036390 RU84_10495 RU84_10500 IPR011701 Major facilitator superfamily RU84_10500 IPR036259 RU84_10500 RU84_10505 IPR004136 2-nitropropane dioxygenase, NPD RU84_10505 IPR013785 Aldolase-type TIM barrel RU84_10510 IPR001753 Crotonase superfamily RU84_10510 IPR014748 Crontonase, C-terminal RU84_10510 IPR029045 ClpP/crotonase-like domain RU84_10515 IPR005471 Transcription regulator IclR, N-terminal RU84_10515 IPR014757 Transcription regulator IclR, C-terminal RU84_10515 IPR029016 GAF domain-like RU84_10515 IPR036388 RU84_10515 RU84_10515 IPR036390 RU84_10515 RU84_10520 IPR003673 CoA-transferase family III RU84_10520 IPR023606 CoA-transferase family III domain RU84_10525 IPR006089 Acyl-CoA dehydrogenase, conserved site RU84_10525 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_10525 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_10525 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_10525 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_10525 IPR036250 RU84_10525 RU84_10525 IPR037069 RU84_10525 RU84_10530 IPR005829 Sugar transporter, conserved site RU84_10530 IPR011701 Major facilitator superfamily RU84_10530 IPR036259 RU84_10530 RU84_10535 IPR006323 Phosphonoacetaldehyde hydrolase RU84_10535 IPR006439 HAD hydrolase, subfamily IA RU84_10535 IPR023198 Phosphoglycolate phosphatase, domain 2 RU84_10535 IPR023214 HAD-like domain RU84_10535 IPR036412 RU84_10535 RU84_10540 IPR000192 Aminotransferase class V domain RU84_10540 IPR012703 2-aminoethylphosphonate--pyruvate transaminase RU84_10540 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_10540 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_10540 IPR015424 Pyridoxal phosphate-dependent transferase RU84_10540 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase RU84_10545 IPR006076 FAD dependent oxidoreductase RU84_10545 IPR017741 FAD-dependent oxidoreductase, HpnW RU84_10545 IPR036188 RU84_10545 RU84_10550 IPR000515 MetI-like domain RU84_10550 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative RU84_10550 IPR035906 RU84_10550 RU84_10555 IPR003439 ABC transporter-like RU84_10555 IPR003593 AAA+ ATPase domain RU84_10555 IPR008995 Molybdate/tungstate binding, C-terminal RU84_10555 IPR017871 ABC transporter, conserved site RU84_10555 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_10560 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative RU84_10560 IPR026045 Ferric binding protein RU84_10565 IPR000524 Transcription regulator HTH, GntR RU84_10565 IPR011663 UbiC transcription regulator-associated RU84_10565 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RU84_10565 IPR036388 RU84_10565 RU84_10565 IPR036390 RU84_10565 RU84_10575 IPR000821 Alanine racemase RU84_10575 IPR001608 Alanine racemase, N-terminal RU84_10575 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RU84_10575 IPR011079 Alanine racemase, C-terminal RU84_10575 IPR029066 PLP-binding barrel RU84_10580 IPR002938 Monooxygenase, FAD-binding RU84_10580 IPR012733 4-hydroxybenzoate 3-monooxygenase RU84_10580 IPR036188 RU84_10580 RU84_10585 IPR005471 Transcription regulator IclR, N-terminal RU84_10585 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR RU84_10585 IPR014757 Transcription regulator IclR, C-terminal RU84_10585 IPR029016 GAF domain-like RU84_10585 IPR036388 RU84_10585 RU84_10585 IPR036390 RU84_10585 RU84_10590 IPR003680 Flavodoxin-like fold RU84_10590 IPR023048 NADH-azoreductase, FMN-dependent RU84_10590 IPR029039 Flavoprotein-like RU84_10595 IPR000847 Transcription regulator HTH, LysR RU84_10595 IPR005119 LysR, substrate-binding RU84_10595 IPR036388 RU84_10595 RU84_10595 IPR036390 RU84_10595 RU84_10600 IPR003779 Carboxymuconolactone decarboxylase-like RU84_10600 IPR029032 AhpD-like RU84_10605 IPR010102 Succinate semialdehyde dehydrogenase RU84_10605 IPR015590 Aldehyde dehydrogenase domain RU84_10605 IPR016160 Aldehyde dehydrogenase, cysteine active site RU84_10605 IPR016161 Aldehyde/histidinol dehydrogenase RU84_10605 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_10605 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_10605 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RU84_10615 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin RU84_10615 IPR026030 Purine-cytosine permease RU84_10615 IPR038271 RU84_10615 RU84_10620 IPR015590 Aldehyde dehydrogenase domain RU84_10620 IPR016160 Aldehyde dehydrogenase, cysteine active site RU84_10620 IPR016161 Aldehyde/histidinol dehydrogenase RU84_10620 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_10620 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_10620 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RU84_10625 IPR011251 Luciferase-like domain RU84_10625 IPR036661 RU84_10625 RU84_10630 IPR002563 Flavin reductase-like, FMN-binding RU84_10630 IPR012349 FMN-binding split barrel RU84_10635 IPR000073 Alpha/beta hydrolase fold-1 RU84_10635 IPR029058 Alpha/Beta hydrolase fold RU84_10640 IPR009569 Amino acid synthesis, putative RU84_10640 IPR035936 RU84_10640 RU84_10645 IPR000524 Transcription regulator HTH, GntR RU84_10645 IPR008920 Transcription regulator FadR/GntR, C-terminal RU84_10645 IPR011711 GntR, C-terminal RU84_10645 IPR036388 RU84_10645 RU84_10645 IPR036390 RU84_10645 RU84_10650 IPR010753 Protein of unknown function DUF1330 RU84_10650 IPR011008 Dimeric alpha-beta barrel RU84_10655 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase RU84_10655 IPR016174 Di-haem cytochrome, transmembrane RU84_10660 IPR011614 Catalase core domain RU84_10660 IPR020835 Catalase-like domain RU84_10660 IPR024168 Catalase, SrpA-type, predicted RU84_10665 IPR000849 Sugar phosphate transporter RU84_10665 IPR011701 Major facilitator superfamily RU84_10665 IPR036259 RU84_10665 RU84_10670 IPR000891 Pyruvate carboxyltransferase RU84_10670 IPR013785 Aldolase-type TIM barrel RU84_10675 IPR003673 CoA-transferase family III RU84_10675 IPR023606 CoA-transferase family III domain RU84_10680 IPR000847 Transcription regulator HTH, LysR RU84_10680 IPR005119 LysR, substrate-binding RU84_10680 IPR036388 RU84_10680 RU84_10680 IPR036390 RU84_10680 RU84_10685 IPR001647 DNA-binding HTH domain, TetR-type RU84_10685 IPR009057 Homeodomain-like RU84_10690 IPR001584 Integrase, catalytic core RU84_10690 IPR012337 Ribonuclease H-like domain RU84_10690 IPR025246 Transposase IS30-like HTH domain RU84_10690 IPR036397 RU84_10690 RU84_10705 IPR003736 Phenylacetic acid degradation-related domain RU84_10705 IPR006683 Thioesterase superfamily RU84_10705 IPR029069 HotDog domain RU84_10710 IPR001451 Bacterial transferase hexapeptide repeat RU84_10710 IPR011004 Trimeric LpxA-like RU84_10715 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX RU84_10715 IPR012906 PaaX-like, N-terminal RU84_10715 IPR013225 PaaX-like, C-terminal RU84_10715 IPR036388 RU84_10715 RU84_10720 IPR000873 AMP-dependent synthetase/ligase RU84_10720 IPR011880 Phenylacetate-CoA ligase RU84_10720 IPR028154 AMP-dependent ligase, C-terminal RU84_10725 IPR002155 Thiolase RU84_10725 IPR012793 Beta-ketoadipyl CoA thiolase RU84_10725 IPR016039 Thiolase-like RU84_10725 IPR020610 Thiolase, active site RU84_10725 IPR020613 Thiolase, conserved site RU84_10725 IPR020615 Thiolase, acyl-enzyme intermediate active site RU84_10725 IPR020616 Thiolase, N-terminal RU84_10725 IPR020617 Thiolase, C-terminal RU84_10730 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RU84_10730 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RU84_10730 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RU84_10730 IPR036291 RU84_10730 RU84_10735 IPR001753 Crotonase superfamily RU84_10735 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB RU84_10735 IPR014748 Crontonase, C-terminal RU84_10735 IPR029045 ClpP/crotonase-like domain RU84_10740 IPR001753 Crotonase superfamily RU84_10740 IPR014748 Crontonase, C-terminal RU84_10740 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RU84_10740 IPR029045 ClpP/crotonase-like domain RU84_10745 IPR001041 2Fe-2S ferredoxin-type domain RU84_10745 IPR001221 Phenol hydroxylase reductase RU84_10745 IPR001433 Oxidoreductase FAD/NAD(P)-binding RU84_10745 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RU84_10745 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RU84_10745 IPR008333 Oxidoreductase, FAD-binding domain RU84_10745 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit RU84_10745 IPR012675 Beta-grasp domain RU84_10745 IPR017938 Riboflavin synthase-like beta-barrel RU84_10745 IPR036010 RU84_10745 RU84_10745 IPR039261 RU84_10745 RU84_10750 IPR002744 Domain of unknown function DUF59 RU84_10750 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit RU84_10750 IPR034904 RU84_10750 RU84_10755 IPR007814 Phenylacetic acid catabolic RU84_10755 IPR009078 Ferritin-like superfamily RU84_10755 IPR011882 Phenylacetate-CoA oxygenase, PaaI subunit RU84_10755 IPR012347 Ferritin-related RU84_10760 IPR009359 Phenylacetic acid degradation B RU84_10760 IPR038693 RU84_10760 RU84_10765 IPR007814 Phenylacetic acid catabolic RU84_10765 IPR009078 Ferritin-like superfamily RU84_10765 IPR011881 Phenylacetate-CoA oxygenase, PaaG subunit RU84_10765 IPR012347 Ferritin-related RU84_10770 IPR002539 MaoC-like domain RU84_10770 IPR011966 Phenylacetic acid degradation protein PaaN RU84_10770 IPR015590 Aldehyde dehydrogenase domain RU84_10770 IPR016161 Aldehyde/histidinol dehydrogenase RU84_10770 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_10770 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_10770 IPR029069 HotDog domain RU84_10775 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form RU84_10775 IPR005130 Serine dehydratase-like, alpha subunit RU84_10775 IPR005131 Serine dehydratase beta chain RU84_10775 IPR029009 Allosteric substrate binding domain RU84_10780 IPR002293 Amino acid/polyamine transporter I RU84_10785 IPR015590 Aldehyde dehydrogenase domain RU84_10785 IPR016161 Aldehyde/histidinol dehydrogenase RU84_10785 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_10785 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_10790 IPR005828 General substrate transporter RU84_10790 IPR005829 Sugar transporter, conserved site RU84_10790 IPR036259 RU84_10790 RU84_10795 IPR009057 Homeodomain-like RU84_10795 IPR013656 PAS fold-4 RU84_10795 IPR018060 DNA binding HTH domain, AraC-type RU84_10795 IPR018062 HTH domain AraC-type, conserved site RU84_10795 IPR020449 Transcription regulator HTH, AraC- type RU84_10795 IPR035965 RU84_10795 RU84_10800 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B RU84_10800 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_10800 IPR036188 RU84_10800 RU84_10805 IPR036010 RU84_10805 RU84_10810 IPR006076 FAD dependent oxidoreductase RU84_10810 IPR036188 RU84_10810 RU84_10815 IPR008794 Proline racemase family RU84_10820 IPR000524 Transcription regulator HTH, GntR RU84_10820 IPR008920 Transcription regulator FadR/GntR, C-terminal RU84_10820 IPR011711 GntR, C-terminal RU84_10820 IPR036388 RU84_10820 RU84_10820 IPR036390 RU84_10820 RU84_10825 IPR000620 Drug/metabolite transporter RU84_10830 IPR002220 DapA-like RU84_10830 IPR013785 Aldolase-type TIM barrel RU84_10835 IPR005590 Protein of unknown function DUF333 RU84_10835 IPR021719 Proteinase inhibitor I78 RU84_10840 IPR000551 MerR-type HTH domain RU84_10840 IPR009061 DNA binding domain, putative RU84_10840 IPR010211 Redox-sensitive transcriptional activator SoxR RU84_10840 IPR015358 Transcription regulator MerR, DNA binding RU84_10845 IPR001584 Integrase, catalytic core RU84_10845 IPR012337 Ribonuclease H-like domain RU84_10845 IPR025246 Transposase IS30-like HTH domain RU84_10845 IPR036397 RU84_10845 RU84_10855 IPR001584 Integrase, catalytic core RU84_10855 IPR012337 Ribonuclease H-like domain RU84_10855 IPR025246 Transposase IS30-like HTH domain RU84_10855 IPR036397 RU84_10855 RU84_10870 IPR001807 Chloride channel, voltage gated RU84_10870 IPR014743 Chloride channel, core RU84_10875 IPR000089 Biotin/lipoyl attachment RU84_10875 IPR001882 Biotin-binding site RU84_10875 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RU84_10875 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal RU84_10875 IPR005482 Biotin carboxylase, C-terminal RU84_10875 IPR011053 Single hybrid motif RU84_10875 IPR011054 Rudiment single hybrid motif RU84_10875 IPR016185 Pre-ATP-grasp domain RU84_10880 IPR003778 Allophanate hydrolase subunit 2 RU84_10880 IPR003833 Allophanate hydrolase subunit 1 RU84_10880 IPR029000 Cyclophilin-like domain RU84_10885 IPR009906 Protein of unknown function DUF1445 RU84_10885 IPR016938 Uncharacterised protein family UPF0317 RU84_10885 IPR038021 RU84_10885 RU84_10890 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RU84_10890 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RU84_10895 IPR001046 NRAMP family RU84_10900 IPR000847 Transcription regulator HTH, LysR RU84_10900 IPR005119 LysR, substrate-binding RU84_10900 IPR036388 RU84_10900 RU84_10900 IPR036390 RU84_10900 RU84_10915 IPR025850 SUKH-3 immunity protein RU84_10935 IPR001584 Integrase, catalytic core RU84_10935 IPR012337 Ribonuclease H-like domain RU84_10935 IPR025246 Transposase IS30-like HTH domain RU84_10935 IPR036397 RU84_10935 RU84_10940 IPR001826 RHS protein RU84_10940 IPR006530 YD repeat RU84_10940 IPR022385 Rhs repeat-associated core RU84_10940 IPR031325 RU84_10940 RU84_10945 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RU84_10945 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RU84_10945 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal RU84_10945 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain RU84_10945 IPR037026 RU84_10945 RU84_10950 IPR012338 Beta-lactamase/transpeptidase-like RU84_10955 IPR006439 HAD hydrolase, subfamily IA RU84_10955 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RU84_10955 IPR023214 HAD-like domain RU84_10955 IPR036412 RU84_10955 RU84_10960 IPR000182 GNAT domain RU84_10960 IPR016181 Acyl-CoA N-acyltransferase RU84_10970 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RU84_10970 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RU84_10970 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RU84_10970 IPR013328 Dehydrogenase, multihelical RU84_10970 IPR022694 3-hydroxyacyl-CoA dehydrogenase RU84_10970 IPR036291 RU84_10970 RU84_10975 IPR014955 Protein of unknown function DUF1826 RU84_10980 IPR000551 MerR-type HTH domain RU84_10980 IPR009061 DNA binding domain, putative RU84_10980 IPR012925 TipAS antibiotic-recognition domain RU84_10985 IPR019223 Domain of unknown function DUF2147 RU84_10990 IPR005829 Sugar transporter, conserved site RU84_10990 IPR011701 Major facilitator superfamily RU84_10990 IPR036259 RU84_10990 RU84_10995 IPR001647 DNA-binding HTH domain, TetR-type RU84_10995 IPR009057 Homeodomain-like RU84_11005 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB RU84_11010 IPR004960 Bacterial lipid A biosynthesis acyltransferase RU84_11010 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase RU84_11015 IPR001633 EAL domain RU84_11015 IPR035919 RU84_11015 RU84_11020 IPR000620 Drug/metabolite transporter RU84_11025 IPR000485 AsnC-type HTH domain RU84_11025 IPR011008 Dimeric alpha-beta barrel RU84_11025 IPR019887 Transcription regulator AsnC-type, C-terminal RU84_11025 IPR019888 Transcription regulator AsnC-type RU84_11025 IPR036388 RU84_11025 RU84_11025 IPR036390 RU84_11025 RU84_11030 IPR000432 DNA mismatch repair protein MutS, C-terminal RU84_11030 IPR005748 DNA mismatch repair protein MutS, type 1 RU84_11030 IPR007695 DNA mismatch repair protein MutS-like, N-terminal RU84_11030 IPR007696 DNA mismatch repair protein MutS, core RU84_11030 IPR007860 DNA mismatch repair protein MutS, connector domain RU84_11030 IPR007861 DNA mismatch repair protein MutS, clamp RU84_11030 IPR016151 DNA mismatch repair protein MutS, N-terminal RU84_11030 IPR017261 DNA mismatch repair protein Msh6 RU84_11030 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_11030 IPR036187 RU84_11030 RU84_11030 IPR036678 RU84_11030 RU84_11035 IPR000182 GNAT domain RU84_11035 IPR016181 Acyl-CoA N-acyltransferase RU84_11040 IPR000813 7Fe ferredoxin RU84_11040 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RU84_11040 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RU84_11040 IPR022569 Ferredoxin, C-terminal RU84_11045 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain RU84_11045 IPR013230 Peptidase M15A, C-terminal RU84_11050 IPR002935 O-methyltransferase, family 3 RU84_11050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_11055 IPR006015 Universal stress protein A RU84_11055 IPR006016 UspA RU84_11060 IPR001451 Bacterial transferase hexapeptide repeat RU84_11060 IPR011004 Trimeric LpxA-like RU84_11060 IPR018357 Hexapeptide transferase, conserved site RU84_11065 IPR001498 Impact, N-terminal RU84_11065 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal RU84_11065 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_11065 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site RU84_11065 IPR035647 RU84_11065 RU84_11065 IPR036956 RU84_11065 RU84_11070 IPR003997 RTX secretion protein D, Gram-negative bacteria RU84_11070 IPR006144 Secretion protein HlyD, conserved site RU84_11070 IPR010129 Type I secretion membrane fusion protein, HlyD RU84_11070 IPR039562 RU84_11070 RU84_11075 IPR003439 ABC transporter-like RU84_11075 IPR003593 AAA+ ATPase domain RU84_11075 IPR011527 ABC transporter type 1, transmembrane domain RU84_11075 IPR017750 ATPase, type I secretion system RU84_11075 IPR017871 ABC transporter, conserved site RU84_11075 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_11075 IPR036640 RU84_11075 RU84_11080 IPR003423 Outer membrane efflux protein RU84_11085 IPR003439 ABC transporter-like RU84_11085 IPR003593 AAA+ ATPase domain RU84_11085 IPR017871 ABC transporter, conserved site RU84_11085 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_11085 IPR030921 RU84_11085 RU84_11085 IPR032823 RU84_11085 RU84_11090 IPR005653 Organic solvent tolerance-like, N-terminal RU84_11090 IPR014340 Lipopolysaccharide assembly, LptA RU84_11095 IPR010664 Lipopolysaccharide assembly, LptC-related RU84_11095 IPR026265 Lipopolysaccharide export system protein LptC RU84_11100 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RU84_11100 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase RU84_11100 IPR023214 HAD-like domain RU84_11100 IPR036412 RU84_11100 RU84_11105 IPR000644 CBS domain RU84_11105 IPR001347 Sugar isomerase (SIS) RU84_11105 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type RU84_11110 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RU84_11110 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_11110 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR RU84_11110 IPR015803 Cysteine-tRNA ligase RU84_11110 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase RU84_11110 IPR032678 RU84_11110 RU84_11130 IPR025419 Domain of unknown function DUF4142 RU84_11145 IPR002577 Helix-turn-helix, HxlR type RU84_11145 IPR036388 RU84_11145 RU84_11145 IPR036390 RU84_11145 RU84_11150 IPR011701 Major facilitator superfamily RU84_11150 IPR036259 RU84_11150 RU84_11155 IPR006528 Phage head morphogenesis domain RU84_11170 IPR000304 Pyrroline-5-carboxylate reductase RU84_11170 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RU84_11170 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RU84_11170 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain RU84_11170 IPR036291 RU84_11170 RU84_11180 IPR002059 Cold-shock protein, DNA-binding RU84_11180 IPR011129 Cold shock protein RU84_11180 IPR012156 Cold shock, CspA RU84_11180 IPR012340 Nucleic acid-binding, OB-fold RU84_11180 IPR019844 Cold-shock conserved site RU84_11185 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RU84_11190 IPR008565 Protein of unknown function DUF847 RU84_11190 IPR018537 Peptidoglycan binding domain RU84_11190 IPR023346 Lysozyme-like domain RU84_11200 IPR001387 Cro/C1-type helix-turn-helix domain RU84_11200 IPR010982 Lambda repressor-like, DNA-binding domain RU84_11200 IPR015927 Peptidase S24/S26A/S26B/S26C RU84_11200 IPR036286 RU84_11200 RU84_11215 IPR003753 Exonuclease VII, large subunit RU84_11215 IPR020579 Exonuclease VII, large subunit, C-terminal RU84_11215 IPR025824 OB-fold nucleic acid binding domain RU84_11220 IPR003761 Exonuclease VII, small subunit RU84_11230 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RU84_11240 IPR005560 Protein of unknown function DUF326 RU84_11245 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RU84_11245 IPR011057 Mss4-like RU84_11250 IPR000551 MerR-type HTH domain RU84_11250 IPR009061 DNA binding domain, putative RU84_11250 IPR011789 Cu(I)-responsive transcriptional regulator RU84_11250 IPR015358 Transcription regulator MerR, DNA binding RU84_11255 IPR001757 Cation-transporting P-type ATPase RU84_11255 IPR006121 Heavy metal-associated domain, HMA RU84_11255 IPR006122 Heavy metal-associated domain, copper ion-binding RU84_11255 IPR008250 P-type ATPase, A domain RU84_11255 IPR017969 Heavy-metal-associated, conserved site RU84_11255 IPR018303 P-type ATPase, phosphorylation site RU84_11255 IPR023214 HAD-like domain RU84_11255 IPR023298 P-type ATPase, transmembrane domain RU84_11255 IPR023299 P-type ATPase, cytoplasmic domain N RU84_11255 IPR027256 Cation-transporting P-type ATPase, subfamily IB RU84_11255 IPR036163 RU84_11255 RU84_11255 IPR036412 RU84_11255 RU84_11260 IPR006121 Heavy metal-associated domain, HMA RU84_11260 IPR017969 Heavy-metal-associated, conserved site RU84_11260 IPR036163 RU84_11260 RU84_11265 IPR002078 RNA polymerase sigma factor 54 interaction domain RU84_11265 IPR002197 DNA binding HTH domain, Fis-type RU84_11265 IPR003593 AAA+ ATPase domain RU84_11265 IPR004096 4-vinyl reductase, 4VR RU84_11265 IPR009057 Homeodomain-like RU84_11265 IPR010523 Activator of aromatic catabolism RU84_11265 IPR024096 NO signalling/Golgi transport ligand-binding domain RU84_11265 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RU84_11265 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RU84_11265 IPR025944 Sigma-54 interaction domain, conserved site RU84_11265 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_11270 IPR010353 Phenol hydroxylase subunit RU84_11275 IPR003430 Methane/phenol/toluene hydroxylase RU84_11275 IPR009078 Ferritin-like superfamily RU84_11275 IPR012078 Methane/phenol monooxygenase, hydroxylase component RU84_11275 IPR012348 Ribonucleotide reductase-related RU84_11280 IPR003454 Monooxygenase component MmoB/DmpM RU84_11280 IPR036889 RU84_11280 RU84_11285 IPR003430 Methane/phenol/toluene hydroxylase RU84_11285 IPR007029 YHS domain RU84_11285 IPR009078 Ferritin-like superfamily RU84_11285 IPR012348 Ribonucleotide reductase-related RU84_11290 IPR006756 Phenol hydroxylase RU84_11295 IPR001041 2Fe-2S ferredoxin-type domain RU84_11295 IPR001221 Phenol hydroxylase reductase RU84_11295 IPR001433 Oxidoreductase FAD/NAD(P)-binding RU84_11295 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RU84_11295 IPR008333 Oxidoreductase, FAD-binding domain RU84_11295 IPR012675 Beta-grasp domain RU84_11295 IPR017938 Riboflavin synthase-like beta-barrel RU84_11295 IPR036010 RU84_11295 RU84_11295 IPR039261 RU84_11295 RU84_11300 IPR025737 MetA-pathway of phenol degradation, putative RU84_11305 IPR000847 Transcription regulator HTH, LysR RU84_11305 IPR005119 LysR, substrate-binding RU84_11305 IPR036388 RU84_11305 RU84_11305 IPR036390 RU84_11305 RU84_11310 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit RU84_11310 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RU84_11310 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RU84_11310 IPR017639 Benzoate 1,2-dioxygenase, large subunit RU84_11310 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RU84_11310 IPR036922 RU84_11310 RU84_11315 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit RU84_11315 IPR017641 Benzoate 1,2-dioxygenase, small subunit RU84_11315 IPR032710 RU84_11315 RU84_11320 IPR001041 2Fe-2S ferredoxin-type domain RU84_11320 IPR001221 Phenol hydroxylase reductase RU84_11320 IPR001433 Oxidoreductase FAD/NAD(P)-binding RU84_11320 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RU84_11320 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RU84_11320 IPR008333 Oxidoreductase, FAD-binding domain RU84_11320 IPR012675 Beta-grasp domain RU84_11320 IPR017938 Riboflavin synthase-like beta-barrel RU84_11320 IPR036010 RU84_11320 RU84_11320 IPR039261 RU84_11320 RU84_11325 IPR002347 Glucose/ribitol dehydrogenase RU84_11325 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_11325 IPR036291 RU84_11325 RU84_11330 IPR004711 Benzoate transporter RU84_11335 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family RU84_11335 IPR005829 Sugar transporter, conserved site RU84_11335 IPR011701 Major facilitator superfamily RU84_11335 IPR036259 RU84_11335 RU84_11340 IPR005318 Outer membrane porin, bacterial RU84_11340 IPR023614 Porin domain RU84_11345 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal RU84_11345 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RU84_11345 IPR016039 Thiolase-like RU84_11345 IPR018201 Beta-ketoacyl synthase, active site RU84_11350 IPR001650 Helicase, C-terminal RU84_11350 IPR003593 AAA+ ATPase domain RU84_11350 IPR007502 Helicase-associated domain RU84_11350 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type RU84_11350 IPR011545 DEAD/DEAH box helicase domain RU84_11350 IPR011709 Domain of unknown function DUF1605 RU84_11350 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RU84_11350 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal RU84_11350 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_11355 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RU84_11355 IPR017559 Alkyl hydroperoxide reductase subunit C RU84_11355 IPR019479 Peroxiredoxin, C-terminal RU84_11355 IPR024706 Peroxiredoxin, AhpC-type RU84_11355 IPR036249 RU84_11355 RU84_11360 IPR025309 KTSC domain RU84_11365 IPR002935 O-methyltransferase, family 3 RU84_11365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_11370 IPR023387 DUF1653-like domain RU84_11370 IPR037135 RU84_11370 RU84_11375 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RU84_11375 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RU84_11375 IPR012081 Alkyl hydroperoxide reductase subunit F RU84_11375 IPR012336 Thioredoxin-like fold RU84_11375 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_11375 IPR036188 RU84_11375 RU84_11375 IPR036249 RU84_11375 RU84_11385 IPR004045 Glutathione S-transferase, N-terminal RU84_11385 IPR004046 Glutathione S-transferase, C-terminal RU84_11385 IPR036249 RU84_11385 RU84_11385 IPR036282 RU84_11385 RU84_11390 IPR001322 Lamin Tail Domain RU84_11390 IPR036691 RU84_11390 RU84_11395 IPR003358 tRNA (guanine-N-7) methyltransferase RU84_11395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_11400 IPR004045 Glutathione S-transferase, N-terminal RU84_11400 IPR004046 Glutathione S-transferase, C-terminal RU84_11400 IPR036249 RU84_11400 RU84_11400 IPR036282 RU84_11400 RU84_11405 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RU84_11405 IPR018931 Domain of unknown function DUF2520 RU84_11405 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RU84_11405 IPR036291 RU84_11405 RU84_11405 IPR037108 RU84_11405 RU84_11410 IPR006664 Outer membrane protein, bacterial RU84_11410 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RU84_11410 IPR006690 Outer membrane protein, OmpA-like, conserved site RU84_11410 IPR036737 RU84_11410 RU84_11415 IPR011059 Metal-dependent hydrolase, composite domain RU84_11415 IPR032466 RU84_11415 RU84_11420 IPR002082 Aspartate carbamoyltransferase RU84_11420 IPR006130 Aspartate/ornithine carbamoyltransferase RU84_11420 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RU84_11420 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RU84_11420 IPR036901 RU84_11420 RU84_11430 IPR000241 Putative RNA methylase domain RU84_11430 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RU84_11430 IPR004114 THUMP RU84_11430 IPR017244 Ribosomal RNA large subunit methyltransferase K/L RU84_11430 IPR019614 S-adenosylmethionine-dependent methyltransferase RU84_11430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_11440 IPR008136 CinA, C-terminal RU84_11440 IPR036653 RU84_11440 RU84_11445 IPR001270 ClpA/B family RU84_11445 IPR003593 AAA+ ATPase domain RU84_11445 IPR003959 ATPase, AAA-type, core RU84_11445 IPR004176 Clp, N-terminal RU84_11445 IPR017730 Chaperonin ClpB RU84_11445 IPR018368 ClpA/B, conserved site 1 RU84_11445 IPR019489 Clp ATPase, C-terminal RU84_11445 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_11445 IPR028299 ClpA/B, conserved site 2 RU84_11445 IPR036628 RU84_11445 RU84_11450 IPR001584 Integrase, catalytic core RU84_11450 IPR012337 Ribonuclease H-like domain RU84_11450 IPR025246 Transposase IS30-like HTH domain RU84_11450 IPR036397 RU84_11450 RU84_11455 IPR011055 Duplicated hybrid motif RU84_11455 IPR016047 Peptidase M23 RU84_11460 IPR000182 GNAT domain RU84_11460 IPR016181 Acyl-CoA N-acyltransferase RU84_11465 IPR003718 OsmC/Ohr family RU84_11465 IPR015946 K homology domain-like, alpha/beta RU84_11465 IPR036102 RU84_11465 RU84_11470 IPR000595 Cyclic nucleotide-binding domain RU84_11470 IPR012318 Helix-turn-helix motif, Crp-type RU84_11470 IPR014710 RmlC-like jelly roll fold RU84_11470 IPR018335 Transcription regulator HTH, Crp-type, conserved site RU84_11470 IPR018488 Cyclic nucleotide-binding, conserved site RU84_11470 IPR018490 Cyclic nucleotide-binding-like RU84_11470 IPR036388 RU84_11470 RU84_11470 IPR036390 RU84_11470 RU84_11475 IPR020471 Aldo/keto reductase subgroup RU84_11475 IPR023210 NADP-dependent oxidoreductase domain RU84_11475 IPR036812 RU84_11475 RU84_11480 IPR001915 Peptidase M48 RU84_11490 IPR001114 Adenylosuccinate synthetase RU84_11490 IPR018220 Adenylosuccinate synthase, active site RU84_11490 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_11490 IPR033128 RU84_11490 RU84_11495 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit RU84_11495 IPR004517 ATP phosphoribosyltransferase regulatory subunit RU84_11505 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I RU84_11505 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain RU84_11505 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain RU84_11505 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site RU84_11505 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family RU84_11505 IPR036291 RU84_11505 RU84_11510 IPR002318 Alanine-tRNA ligase, class IIc RU84_11510 IPR003156 DHHA1 domain RU84_11510 IPR009000 Translation protein, beta-barrel domain RU84_11510 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RU84_11510 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain RU84_11510 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain RU84_11510 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal RU84_11510 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria RU84_11515 IPR001048 Aspartate/glutamate/uridylate kinase RU84_11515 IPR001341 Aspartate kinase domain RU84_11515 IPR002912 ACT domain RU84_11515 IPR005260 Aspartate kinase, monofunctional class RU84_11515 IPR018042 Aspartate kinase, conserved site RU84_11515 IPR027795 GATS-like ACT domain RU84_11515 IPR036393 RU84_11515 RU84_11520 IPR003751 Carbon storage regulator RU84_11520 IPR036107 RU84_11520 RU84_11525 IPR012337 Ribonuclease H-like domain RU84_11525 IPR022898 Ribonuclease HII RU84_11525 IPR024567 Ribonuclease HII/HIII domain RU84_11525 IPR036397 RU84_11525 RU84_11535 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase RU84_11535 IPR016174 Di-haem cytochrome, transmembrane RU84_11540 IPR001365 Adenosine/AMP deaminase domain RU84_11540 IPR006330 Adenosine/adenine deaminase RU84_11540 IPR028892 Adenine deaminase type 2 RU84_11540 IPR032466 RU84_11540 RU84_11545 IPR006043 Xanthine/uracil/vitamin C permease RU84_11545 IPR026033 Purine permease PbuG-like RU84_11555 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RU84_11555 IPR036188 RU84_11555 RU84_11560 IPR002347 Glucose/ribitol dehydrogenase RU84_11560 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_11560 IPR036291 RU84_11560 RU84_11565 IPR016516 Uncharacterised conserved protein UCP07580 RU84_11570 IPR003829 Pirin, N-terminal domain RU84_11570 IPR011051 RmlC-like cupin domain RU84_11570 IPR012093 Pirin RU84_11570 IPR014710 RmlC-like jelly roll fold RU84_11575 IPR001647 DNA-binding HTH domain, TetR-type RU84_11575 IPR009057 Homeodomain-like RU84_11575 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RU84_11580 IPR016516 Uncharacterised conserved protein UCP07580 RU84_11585 IPR002347 Glucose/ribitol dehydrogenase RU84_11585 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_11585 IPR036291 RU84_11585 RU84_11595 IPR007213 Leucine carboxyl methyltransferase RU84_11595 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative RU84_11595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_11600 IPR009057 Homeodomain-like RU84_11600 IPR018060 DNA binding HTH domain, AraC-type RU84_11600 IPR032687 RU84_11600 RU84_11605 IPR020946 Flavin monooxygenase-like RU84_11605 IPR036188 RU84_11605 RU84_11610 IPR002347 Glucose/ribitol dehydrogenase RU84_11610 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_11610 IPR036291 RU84_11610 RU84_11615 IPR002168 Lipase, GDXG, active site RU84_11615 IPR013094 Alpha/beta hydrolase fold-3 RU84_11615 IPR029058 Alpha/Beta hydrolase fold RU84_11620 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal RU84_11620 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RU84_11620 IPR036188 RU84_11620 RU84_11625 IPR005318 Outer membrane porin, bacterial RU84_11625 IPR023614 Porin domain RU84_11630 IPR005829 Sugar transporter, conserved site RU84_11630 IPR011701 Major facilitator superfamily RU84_11630 IPR036259 RU84_11630 RU84_11635 IPR000917 Sulfatase RU84_11635 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RU84_11635 IPR017850 Alkaline-phosphatase-like, core domain RU84_11635 IPR024607 Sulfatase, conserved site RU84_11640 IPR005532 Formylglycine-generating sulphatase enzyme domain RU84_11640 IPR016187 C-type lectin fold RU84_11645 IPR005318 Outer membrane porin, bacterial RU84_11645 IPR023614 Porin domain RU84_11650 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RU84_11650 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RU84_11650 IPR036922 RU84_11650 RU84_11655 IPR000951 Phthalate dioxygenase reductase RU84_11655 IPR001041 2Fe-2S ferredoxin-type domain RU84_11655 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RU84_11655 IPR012675 Beta-grasp domain RU84_11655 IPR017938 Riboflavin synthase-like beta-barrel RU84_11655 IPR036010 RU84_11655 RU84_11655 IPR039261 RU84_11655 RU84_11660 IPR000524 Transcription regulator HTH, GntR RU84_11660 IPR008920 Transcription regulator FadR/GntR, C-terminal RU84_11660 IPR011711 GntR, C-terminal RU84_11660 IPR036388 RU84_11660 RU84_11660 IPR036390 RU84_11660 RU84_11665 IPR000835 MarR-type HTH domain RU84_11665 IPR036388 RU84_11665 RU84_11665 IPR036390 RU84_11665 RU84_11670 IPR005829 Sugar transporter, conserved site RU84_11670 IPR011701 Major facilitator superfamily RU84_11670 IPR036259 RU84_11670 RU84_11675 IPR001753 Crotonase superfamily RU84_11675 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RU84_11675 IPR029045 ClpP/crotonase-like domain RU84_11680 IPR015590 Aldehyde dehydrogenase domain RU84_11680 IPR016161 Aldehyde/histidinol dehydrogenase RU84_11680 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_11680 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_11680 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RU84_11685 IPR000873 AMP-dependent synthetase/ligase RU84_11690 IPR006089 Acyl-CoA dehydrogenase, conserved site RU84_11690 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_11690 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_11690 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_11690 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_11690 IPR036250 RU84_11690 RU84_11690 IPR037069 RU84_11690 RU84_11695 IPR005318 Outer membrane porin, bacterial RU84_11695 IPR023614 Porin domain RU84_11700 IPR020915 Uncharacterised protein family UPF0311 RU84_11705 IPR003736 Phenylacetic acid degradation-related domain RU84_11705 IPR006683 Thioesterase superfamily RU84_11705 IPR029069 HotDog domain RU84_11710 IPR011118 Tannase/feruloyl esterase RU84_11710 IPR029058 Alpha/Beta hydrolase fold RU84_11715 IPR000524 Transcription regulator HTH, GntR RU84_11715 IPR008920 Transcription regulator FadR/GntR, C-terminal RU84_11715 IPR011711 GntR, C-terminal RU84_11715 IPR036388 RU84_11715 RU84_11715 IPR036390 RU84_11715 RU84_11720 IPR015590 Aldehyde dehydrogenase domain RU84_11720 IPR016161 Aldehyde/histidinol dehydrogenase RU84_11720 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_11720 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_11725 IPR002220 DapA-like RU84_11725 IPR013785 Aldolase-type TIM barrel RU84_11725 IPR017655 5-dehydro-4-deoxyglucarate dehydratase RU84_11730 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RU84_11730 IPR017653 Glucarate dehydratase RU84_11730 IPR029017 Enolase N-terminal domain-like RU84_11730 IPR029065 Enolase C-terminal domain-like RU84_11730 IPR036849 RU84_11730 RU84_11735 IPR000849 Sugar phosphate transporter RU84_11735 IPR011701 Major facilitator superfamily RU84_11735 IPR036259 RU84_11735 RU84_11745 IPR000620 Drug/metabolite transporter RU84_11750 IPR009057 Homeodomain-like RU84_11750 IPR018060 DNA binding HTH domain, AraC-type RU84_11750 IPR020449 Transcription regulator HTH, AraC- type RU84_11750 IPR032687 RU84_11750 RU84_11755 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent RU84_11755 IPR015590 Aldehyde dehydrogenase domain RU84_11755 IPR016160 Aldehyde dehydrogenase, cysteine active site RU84_11755 IPR016161 Aldehyde/histidinol dehydrogenase RU84_11755 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_11755 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_11755 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RU84_11765 IPR001584 Integrase, catalytic core RU84_11765 IPR012337 Ribonuclease H-like domain RU84_11765 IPR025246 Transposase IS30-like HTH domain RU84_11765 IPR036397 RU84_11765 RU84_11775 IPR025361 Protein of unknown function DUF4265 RU84_11785 IPR002293 Amino acid/polyamine transporter I RU84_11785 IPR004841 Amino acid permease/ SLC12A domain RU84_11790 IPR007041 Arginine N-succinyltransferase Ast/AOST RU84_11790 IPR016181 Acyl-CoA N-acyltransferase RU84_11790 IPR017650 Arginine N-succinyltransferase AstA RU84_11795 IPR004636 Acetylornithine/Succinylornithine transaminase family RU84_11795 IPR005814 Aminotransferase class-III RU84_11795 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_11795 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_11795 IPR015424 Pyridoxal phosphate-dependent transferase RU84_11795 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria RU84_11800 IPR000485 AsnC-type HTH domain RU84_11800 IPR011008 Dimeric alpha-beta barrel RU84_11800 IPR019887 Transcription regulator AsnC-type, C-terminal RU84_11800 IPR019888 Transcription regulator AsnC-type RU84_11800 IPR036388 RU84_11800 RU84_11800 IPR036390 RU84_11800 RU84_11805 IPR015590 Aldehyde dehydrogenase domain RU84_11805 IPR016160 Aldehyde dehydrogenase, cysteine active site RU84_11805 IPR016161 Aldehyde/histidinol dehydrogenase RU84_11805 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_11805 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_11805 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RU84_11810 IPR032710 RU84_11810 RU84_11810 IPR037401 RU84_11810 RU84_11815 IPR000524 Transcription regulator HTH, GntR RU84_11815 IPR008920 Transcription regulator FadR/GntR, C-terminal RU84_11815 IPR011711 GntR, C-terminal RU84_11815 IPR036388 RU84_11815 RU84_11815 IPR036390 RU84_11815 RU84_11820 IPR033479 RU84_11820 RU84_11825 IPR002293 Amino acid/polyamine transporter I RU84_11825 IPR004841 Amino acid permease/ SLC12A domain RU84_11830 IPR006076 FAD dependent oxidoreductase RU84_11830 IPR036188 RU84_11830 RU84_11835 IPR002293 Amino acid/polyamine transporter I RU84_11835 IPR004840 Amino acid permease, conserved site RU84_11835 IPR004841 Amino acid permease/ SLC12A domain RU84_11845 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_11870 IPR001826 RHS protein RU84_11870 IPR006530 YD repeat RU84_11870 IPR022385 Rhs repeat-associated core RU84_11870 IPR031325 RU84_11870 RU84_11875 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RU84_11875 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RU84_11875 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal RU84_11875 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain RU84_11875 IPR037026 RU84_11875 RU84_11880 IPR001647 DNA-binding HTH domain, TetR-type RU84_11880 IPR009057 Homeodomain-like RU84_11885 IPR004872 Lipoprotein NlpA family RU84_11890 IPR010295 Protein of unknown function DUF898 RU84_11895 IPR001915 Peptidase M48 RU84_11925 IPR003959 ATPase, AAA-type, core RU84_11925 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_11925 IPR030974 RU84_11925 RU84_11935 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RU84_11935 IPR003356 DNA methylase, adenine-specific RU84_11935 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RU84_11935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_11940 IPR001650 Helicase, C-terminal RU84_11940 IPR006935 Helicase/UvrB domain RU84_11940 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal RU84_11940 IPR013670 EcoEI R protein C-terminal domain RU84_11940 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RU84_11940 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_11950 IPR026325 Protein of unknown function DUF932 RU84_11955 IPR008523 Lactobacillus phage LBR48, DUF805 RU84_11970 IPR001584 Integrase, catalytic core RU84_11970 IPR012337 Ribonuclease H-like domain RU84_11970 IPR025246 Transposase IS30-like HTH domain RU84_11970 IPR036397 RU84_11970 RU84_11975 IPR001034 HTH DeoR N-terminal domain RU84_11975 IPR026881 WYL domain RU84_11975 IPR036390 RU84_11975 RU84_11985 IPR011704 ATPase, dynein-related, AAA domain RU84_11985 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_11990 IPR019650 Protein of unknown function DUF2513 RU84_11995 IPR017686 Phage/plasmid-like protein RU84_11995 IPR026325 Protein of unknown function DUF932 RU84_12000 IPR008523 Lactobacillus phage LBR48, DUF805 RU84_12020 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_12045 IPR020518 Transcription regulator PrtN RU84_12050 IPR010260 Bacteriophage P4, Orf88 RU84_12055 IPR025455 Protein of unknown function DUF4276 RU84_12060 IPR003959 ATPase, AAA-type, core RU84_12060 IPR014555 RecF-like RU84_12060 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_12065 IPR002104 Integrase, catalytic RU84_12065 IPR010998 Integrase, Lambda-type, N-terminal RU84_12065 IPR011010 DNA breaking-rejoining enzyme, catalytic core RU84_12065 IPR013762 Integrase-like, catalytic core RU84_12065 IPR025166 Domain of unknown function DUF4102 RU84_12065 IPR038488 RU84_12065 RU84_12075 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RU84_12075 IPR013785 Aldolase-type TIM barrel RU84_12075 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_12075 IPR036188 RU84_12075 RU84_12080 IPR001518 Argininosuccinate synthase RU84_12080 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_12080 IPR018223 Argininosuccinate synthase, conserved site RU84_12080 IPR023437 Argininosuccinate synthase, type 2 subfamily RU84_12080 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail RU84_12080 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body RU84_12085 IPR000160 GGDEF domain RU84_12085 IPR029787 Nucleotide cyclase RU84_12090 IPR002195 Dihydroorotase, conserved site RU84_12090 IPR004721 Dihydroorotase homodimeric type RU84_12090 IPR006680 Amidohydrolase 1 RU84_12090 IPR032466 RU84_12090 RU84_12095 IPR005987 Ribonuclease T RU84_12095 IPR012337 Ribonuclease H-like domain RU84_12095 IPR013520 Exonuclease, RNase T/DNA polymerase III RU84_12095 IPR036397 RU84_12095 RU84_12105 IPR000531 TonB-dependent receptor, beta-barrel RU84_12105 IPR010105 TonB-dependent siderophore receptor RU84_12105 IPR012910 TonB-dependent receptor, plug RU84_12105 IPR036942 RU84_12105 RU84_12105 IPR037066 RU84_12105 RU84_12110 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RU84_12110 IPR013785 Aldolase-type TIM barrel RU84_12115 IPR003439 ABC transporter-like RU84_12115 IPR003593 AAA+ ATPase domain RU84_12115 IPR017871 ABC transporter, conserved site RU84_12115 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_12120 IPR000515 MetI-like domain RU84_12120 IPR035906 RU84_12120 RU84_12125 IPR000515 MetI-like domain RU84_12125 IPR035906 RU84_12125 RU84_12130 IPR000914 Bacterial extracellular solute-binding protein, family 5 RU84_12130 IPR030678 RU84_12130 RU84_12135 IPR000189 Prokaryotic transglycosylase, active site RU84_12135 IPR008258 Lytic transglycosylase-like SLT domain RU84_12135 IPR018392 LysM domain RU84_12135 IPR023346 Lysozyme-like domain RU84_12135 IPR036779 RU84_12135 RU84_12140 IPR002156 Ribonuclease H domain RU84_12140 IPR006054 DNA polymerase III, epsilon subunit RU84_12140 IPR006309 DNA polymerase 3, epsilon subunit RU84_12140 IPR012337 Ribonuclease H-like domain RU84_12140 IPR013520 Exonuclease, RNase T/DNA polymerase III RU84_12140 IPR022892 Ribonuclease H RU84_12140 IPR036397 RU84_12140 RU84_12145 IPR036641 RU84_12145 RU84_12150 IPR000086 NUDIX hydrolase domain RU84_12150 IPR015376 Zinc ribbon, NADH pyrophosphatase RU84_12150 IPR015797 NUDIX hydrolase domain-like RU84_12150 IPR020084 NUDIX hydrolase, conserved site RU84_12155 IPR013094 Alpha/beta hydrolase fold-3 RU84_12155 IPR029058 Alpha/Beta hydrolase fold RU84_12160 IPR007055 BON domain RU84_12165 IPR003509 Uncharacterised protein family UPF0102 RU84_12165 IPR011335 Restriction endonuclease type II-like RU84_12165 IPR011856 tRNA endonuclease-like domain RU84_12170 IPR000878 Tetrapyrrole methylase RU84_12170 IPR008189 rRNA small subunit methyltransferase I RU84_12170 IPR014776 Tetrapyrrole methylase, subdomain 2 RU84_12170 IPR014777 Tetrapyrrole methylase, subdomain 1 RU84_12170 IPR018063 SAM-dependent methyltransferase RsmI, conserved site RU84_12170 IPR035996 RU84_12170 RU84_12180 IPR000847 Transcription regulator HTH, LysR RU84_12180 IPR005119 LysR, substrate-binding RU84_12180 IPR017685 Transcription regulator ArgP RU84_12180 IPR036388 RU84_12180 RU84_12180 IPR036390 RU84_12180 RU84_12185 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RU84_12190 IPR002524 Cation efflux protein RU84_12190 IPR027469 Cation efflux protein transmembrane domain RU84_12195 IPR000551 MerR-type HTH domain RU84_12195 IPR009061 DNA binding domain, putative RU84_12205 IPR002938 Monooxygenase, FAD-binding RU84_12205 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 RU84_12205 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site RU84_12205 IPR036188 RU84_12205 RU84_12210 IPR002938 Monooxygenase, FAD-binding RU84_12210 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 RU84_12210 IPR036188 RU84_12210 RU84_12215 IPR000994 Peptidase M24, structural domain RU84_12215 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RU84_12215 IPR007865 Aminopeptidase P, N-terminal RU84_12215 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RU84_12215 IPR036005 RU84_12215 RU84_12220 IPR011978 Uncharacterised protein family UPF0149 RU84_12220 IPR036255 RU84_12220 RU84_12230 IPR007838 Cell division protein ZapA-like RU84_12230 IPR036192 RU84_12230 RU84_12235 IPR002104 Integrase, catalytic RU84_12235 IPR010998 Integrase, Lambda-type, N-terminal RU84_12235 IPR011010 DNA breaking-rejoining enzyme, catalytic core RU84_12235 IPR013762 Integrase-like, catalytic core RU84_12235 IPR025166 Domain of unknown function DUF4102 RU84_12250 IPR003738 Protein of unknown function DUF159 RU84_12250 IPR036590 RU84_12250 RU84_12255 IPR015927 Peptidase S24/S26A/S26B/S26C RU84_12255 IPR036286 RU84_12255 RU84_12260 IPR001126 DNA-repair protein, UmuC-like RU84_12260 IPR017961 DNA polymerase, Y-family, little finger domain RU84_12260 IPR025188 Domain of unknown function DUF4113 RU84_12260 IPR036775 RU84_12260 RU84_12270 IPR008565 Protein of unknown function DUF847 RU84_12270 IPR018537 Peptidoglycan binding domain RU84_12270 IPR023346 Lysozyme-like domain RU84_12290 IPR014974 Domain of unknown function DUF1833 RU84_12305 IPR009302 Tail length tape measure RU84_12305 IPR011055 Duplicated hybrid motif RU84_12305 IPR013491 Caudovirus, tape measure, N-terminal RU84_12320 IPR031807 RU84_12320 RU84_12320 IPR035069 RU84_12320 RU84_12325 IPR012933 HicA mRNA interferase family RU84_12325 IPR038570 RU84_12325 RU84_12355 IPR025395 Protein of unknown function DUF4128 RU84_12380 IPR018803 Putative stress-responsive protein RU84_12410 IPR006528 Phage head morphogenesis domain RU84_12415 IPR025129 Domain of unknown function DUF4055 RU84_12420 IPR006517 Archaeophage PsiM2, terminase large subunit RU84_12420 IPR035421 RU84_12420 RU84_12425 IPR018738 Protein of unknown function DUF2280 RU84_12445 IPR001584 Integrase, catalytic core RU84_12445 IPR012337 Ribonuclease H-like domain RU84_12445 IPR025246 Transposase IS30-like HTH domain RU84_12445 IPR036397 RU84_12445 RU84_12480 IPR007569 Domain of unknown function DUF559 RU84_12480 IPR011335 Restriction endonuclease type II-like RU84_12490 IPR003615 HNH nuclease RU84_12505 IPR006497 Bacteriophage lambda, GpO, N-terminal RU84_12505 IPR036388 RU84_12505 RU84_12520 IPR010982 Lambda repressor-like, DNA-binding domain RU84_12525 IPR010982 Lambda repressor-like, DNA-binding domain RU84_12530 IPR001387 Cro/C1-type helix-turn-helix domain RU84_12530 IPR010982 Lambda repressor-like, DNA-binding domain RU84_12530 IPR015927 Peptidase S24/S26A/S26B/S26C RU84_12530 IPR036286 RU84_12530 RU84_12540 IPR001387 Cro/C1-type helix-turn-helix domain RU84_12540 IPR010982 Lambda repressor-like, DNA-binding domain RU84_12540 IPR039554 RU84_12540 RU84_12600 IPR002698 5-formyltetrahydrofolate cyclo-ligase RU84_12600 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RU84_12600 IPR037171 RU84_12600 RU84_12605 IPR003111 Peptidase S16, lon N-terminal RU84_12605 IPR003593 AAA+ ATPase domain RU84_12605 IPR003959 ATPase, AAA-type, core RU84_12605 IPR004815 Lon protease, bacterial/eukaryotic-type RU84_12605 IPR008268 Peptidase S16, active site RU84_12605 IPR008269 Peptidase S16, Lon C-terminal RU84_12605 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RU84_12605 IPR015947 PUA-like domain RU84_12605 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_12605 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_12605 IPR027543 Lon protease, bacterial RU84_12610 IPR003742 SPOUT methyltransferase, predicted RU84_12610 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RU84_12610 IPR029028 Alpha/beta knot methyltransferases RU84_12615 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B RU84_12615 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type RU84_12620 IPR005184 Domain of unknown function DUF306, Meta/HslJ RU84_12620 IPR025485 Domain of unknown function DUF4377 RU84_12620 IPR038670 RU84_12620 RU84_12625 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase RU84_12625 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal RU84_12625 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain RU84_12625 IPR014362 Glutamate dehydrogenase RU84_12625 IPR033524 RU84_12625 RU84_12625 IPR036291 RU84_12625 RU84_12630 IPR007202 4Fe-4S domain RU84_12630 IPR010207 Electron transport complex, RnfB RU84_12630 IPR011005 Dihydropteroate synthase-like RU84_12630 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RU84_12635 IPR000445 Helix-hairpin-helix motif RU84_12635 IPR003265 HhH-GPD domain RU84_12635 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif RU84_12635 IPR004035 Endonuclease III, iron-sulphur binding site RU84_12635 IPR004036 Endonuclease III-like, conserved site-2 RU84_12635 IPR005759 Endonuclease III RU84_12635 IPR011257 DNA glycosylase RU84_12635 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RU84_12640 IPR000850 Adenylate kinase/UMP-CMP kinase RU84_12640 IPR006259 Adenylate kinase subfamily RU84_12640 IPR007862 Adenylate kinase, active site lid domain RU84_12640 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_12640 IPR033690 RU84_12640 RU84_12655 IPR001460 Penicillin-binding protein, transpeptidase RU84_12655 IPR005311 Penicillin-binding protein, dimerisation domain RU84_12655 IPR012338 Beta-lactamase/transpeptidase-like RU84_12655 IPR017790 Penicillin-binding protein 2 RU84_12655 IPR036138 RU84_12655 RU84_12660 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RU84_12660 IPR004398 RNA methyltransferase, RsmD RU84_12660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_12665 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein RU84_12670 IPR003495 CobW/HypB/UreG domain RU84_12670 IPR004400 Urease accessory protein UreG RU84_12670 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase RU84_12670 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_12675 IPR002639 Urease accessory protein UreF RU84_12675 IPR038277 RU84_12675 RU84_12680 IPR004029 UreE urease accessory, N-terminal RU84_12680 IPR007864 Urease accessory protein UreE, C-terminal domain RU84_12680 IPR012406 Urease accessory protein UreE RU84_12680 IPR036118 RU84_12680 RU84_12680 IPR036675 RU84_12680 RU84_12685 IPR005848 Urease, alpha subunit RU84_12685 IPR006680 Amidohydrolase 1 RU84_12685 IPR011059 Metal-dependent hydrolase, composite domain RU84_12685 IPR011612 Urease alpha-subunit, N-terminal domain RU84_12685 IPR017950 Urease active site RU84_12685 IPR029754 Urease nickel binding site RU84_12685 IPR032466 RU84_12685 RU84_12690 IPR002019 Urease, beta subunit RU84_12690 IPR036461 RU84_12690 RU84_12695 IPR002026 Urease, gamma/gamma-beta subunit RU84_12695 IPR012010 Urease, gamma subunit RU84_12695 IPR036463 RU84_12695 RU84_12700 IPR002669 Urease accessory protein UreD RU84_12710 IPR007298 Copper resistance lipoprotein NlpE RU84_12715 IPR006254 Isocitrate lyase RU84_12715 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RU84_12720 IPR000847 Transcription regulator HTH, LysR RU84_12720 IPR005119 LysR, substrate-binding RU84_12720 IPR036388 RU84_12720 RU84_12720 IPR036390 RU84_12720 RU84_12725 IPR000644 CBS domain RU84_12725 IPR002550 Domain of unknown function DUF21 RU84_12725 IPR005170 Transporter-associated domain RU84_12725 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RU84_12725 IPR036318 RU84_12725 RU84_12730 IPR004680 Citrate transporter-like domain RU84_12730 IPR014738 Citrate transporter RU84_12740 IPR018715 Protein of unknown function DUF2239 RU84_12745 IPR000795 Elongation factor, GTP-binding domain RU84_12745 IPR005225 Small GTP-binding protein domain RU84_12745 IPR009000 Translation protein, beta-barrel domain RU84_12745 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RU84_12745 IPR011779 Sulphate adenylyltransferase, large subunit RU84_12745 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_12745 IPR031157 RU84_12745 RU84_12750 IPR002500 Phosphoadenosine phosphosulphate reductase RU84_12750 IPR011784 Sulphate adenylyltransferase, small subunit RU84_12750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_12755 IPR026950 Capsule assembly protein Wzi RU84_12755 IPR038636 RU84_12755 RU84_12760 IPR002313 Lysine-tRNA ligase, class II RU84_12760 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RU84_12760 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RU84_12760 IPR012340 Nucleic acid-binding, OB-fold RU84_12760 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal RU84_12765 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA RU84_12765 IPR029058 Alpha/Beta hydrolase fold RU84_12770 IPR013538 Activator of Hsp90 ATPase homologue 1-like RU84_12770 IPR023393 START-like domain RU84_12775 IPR018527 Rubredoxin, iron-binding site RU84_12775 IPR024922 Rubredoxin RU84_12775 IPR024935 Rubredoxin domain RU84_12780 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_12780 IPR036188 RU84_12780 RU84_12785 IPR000073 Alpha/beta hydrolase fold-1 RU84_12785 IPR029058 Alpha/Beta hydrolase fold RU84_12790 IPR000847 Transcription regulator HTH, LysR RU84_12790 IPR005119 LysR, substrate-binding RU84_12790 IPR036388 RU84_12790 RU84_12790 IPR036390 RU84_12790 RU84_12795 IPR007730 Sporulation-related domain RU84_12795 IPR036680 RU84_12795 RU84_12800 IPR003414 Polyphosphate kinase RU84_12800 IPR024953 Polyphosphate kinase middle domain RU84_12800 IPR025198 Polyphosphate kinase N-terminal domain RU84_12800 IPR025200 Polyphosphate kinase C-terminal domain RU84_12800 IPR036830 RU84_12800 RU84_12800 IPR036832 RU84_12800 RU84_12805 IPR001264 Glycosyl transferase, family 51 RU84_12805 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase RU84_12805 IPR023346 Lysozyme-like domain RU84_12805 IPR036950 RU84_12805 RU84_12810 IPR022764 Peptidase S54, rhomboid domain RU84_12810 IPR035952 RU84_12810 RU84_12815 IPR003838 Permease FtsX-like RU84_12820 IPR003439 ABC transporter-like RU84_12820 IPR003593 AAA+ ATPase domain RU84_12820 IPR017871 ABC transporter, conserved site RU84_12820 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_12825 IPR008265 Lipase, GDSL, active site RU84_12825 IPR013830 RU84_12825 RU84_12825 IPR036514 RU84_12825 RU84_12830 IPR001765 Carbonic anhydrase RU84_12830 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site RU84_12830 IPR036874 RU84_12830 RU84_12845 IPR000531 TonB-dependent receptor, beta-barrel RU84_12845 IPR010105 TonB-dependent siderophore receptor RU84_12845 IPR010917 TonB-dependent receptor, conserved site RU84_12845 IPR012910 TonB-dependent receptor, plug RU84_12845 IPR036942 RU84_12845 RU84_12845 IPR037066 RU84_12845 RU84_12850 IPR000361 FeS cluster biogenesis RU84_12850 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal RU84_12850 IPR017726 Fe/S biogenesis protein NfuA RU84_12850 IPR034904 RU84_12850 RU84_12850 IPR035903 RU84_12850 RU84_12855 IPR022764 Peptidase S54, rhomboid domain RU84_12855 IPR035952 RU84_12855 RU84_12860 IPR000917 Sulfatase RU84_12860 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RU84_12860 IPR017850 Alkaline-phosphatase-like, core domain RU84_12860 IPR024607 Sulfatase, conserved site RU84_12865 IPR005532 Formylglycine-generating sulphatase enzyme domain RU84_12865 IPR016187 C-type lectin fold RU84_12880 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RU84_12880 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RU84_12880 IPR011780 D-serine ammonia-lyase RU84_12880 IPR036052 RU84_12880 RU84_12885 IPR001204 Phosphate transporter RU84_12890 IPR000489 Pterin-binding RU84_12890 IPR003726 Homocysteine S-methyltransferase RU84_12890 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RU84_12890 IPR004223 Vitamin B12-dependent methionine synthase, activation domain RU84_12890 IPR006158 Cobalamin (vitamin B12)-binding domain RU84_12890 IPR011005 Dihydropteroate synthase-like RU84_12890 IPR011822 Cobalamin-dependent methionine synthase RU84_12890 IPR036589 RU84_12890 RU84_12890 IPR036594 RU84_12890 RU84_12890 IPR036724 RU84_12890 RU84_12890 IPR037010 RU84_12890 RU84_12895 IPR005475 Transketolase-like, pyrimidine-binding domain RU84_12895 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RU84_12895 IPR029061 Thiamin diphosphate-binding fold RU84_12895 IPR033248 RU84_12895 RU84_12900 IPR005474 Transketolase, N-terminal RU84_12900 IPR029061 Thiamin diphosphate-binding fold RU84_12905 IPR011701 Major facilitator superfamily RU84_12905 IPR036259 RU84_12905 RU84_12910 IPR002347 Glucose/ribitol dehydrogenase RU84_12910 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_12910 IPR036291 RU84_12910 RU84_12915 IPR000847 Transcription regulator HTH, LysR RU84_12915 IPR005119 LysR, substrate-binding RU84_12915 IPR036388 RU84_12915 RU84_12915 IPR036390 RU84_12915 RU84_12925 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase RU84_12925 IPR011013 Galactose mutarotase-like domain RU84_12925 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup RU84_12925 IPR015443 Aldose 1-epimerase RU84_12925 IPR018052 Aldose 1-epimerase, conserved site RU84_12930 IPR011701 Major facilitator superfamily RU84_12930 IPR036259 RU84_12930 RU84_12940 IPR012338 Beta-lactamase/transpeptidase-like RU84_12940 IPR015868 Glutaminase RU84_12940 IPR036513 RU84_12940 RU84_12945 IPR023635 Peptide deformylase RU84_12945 IPR036821 RU84_12945 RU84_12950 IPR011701 Major facilitator superfamily RU84_12950 IPR036259 RU84_12950 RU84_12960 IPR000399 TPP-binding enzyme, conserved site RU84_12960 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RU84_12960 IPR012000 Thiamine pyrophosphate enzyme, central domain RU84_12960 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RU84_12960 IPR029035 DHS-like NAD/FAD-binding domain RU84_12960 IPR029061 Thiamin diphosphate-binding fold RU84_12965 IPR015590 Aldehyde dehydrogenase domain RU84_12965 IPR016160 Aldehyde dehydrogenase, cysteine active site RU84_12965 IPR016161 Aldehyde/histidinol dehydrogenase RU84_12965 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_12965 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_12965 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RU84_12970 IPR002811 Aspartate dehydrogenase RU84_12970 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RU84_12970 IPR011182 L-aspartate dehydrogenase RU84_12970 IPR020626 L-aspartate dehydrogenase, prokaryotic RU84_12970 IPR036291 RU84_12970 RU84_12975 IPR002347 Glucose/ribitol dehydrogenase RU84_12975 IPR036291 RU84_12975 RU84_12980 IPR000073 Alpha/beta hydrolase fold-1 RU84_12980 IPR029058 Alpha/Beta hydrolase fold RU84_12985 IPR011051 RmlC-like cupin domain RU84_12985 IPR013096 Cupin 2, conserved barrel RU84_12985 IPR014710 RmlC-like jelly roll fold RU84_12990 IPR005829 Sugar transporter, conserved site RU84_12990 IPR011701 Major facilitator superfamily RU84_12990 IPR036259 RU84_12990 RU84_12995 IPR016156 FAD/NAD-linked reductase, dimerisation domain RU84_12995 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_12995 IPR028202 Reductase, C-terminal RU84_12995 IPR036188 RU84_12995 RU84_13000 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RU84_13000 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RU84_13005 IPR002347 Glucose/ribitol dehydrogenase RU84_13005 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_13005 IPR036291 RU84_13005 RU84_13010 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RU84_13010 IPR036922 RU84_13010 RU84_13020 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RU84_13020 IPR036922 RU84_13020 RU84_13025 IPR005471 Transcription regulator IclR, N-terminal RU84_13025 IPR014757 Transcription regulator IclR, C-terminal RU84_13025 IPR029016 GAF domain-like RU84_13025 IPR036388 RU84_13025 RU84_13025 IPR036390 RU84_13025 RU84_13035 IPR006419 Nicotinamide mononucleotide transporter PnuC RU84_13040 IPR001753 Crotonase superfamily RU84_13040 IPR014748 Crontonase, C-terminal RU84_13040 IPR029045 ClpP/crotonase-like domain RU84_13045 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD RU84_13050 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA RU84_13050 IPR029044 Nucleotide-diphospho-sugar transferases RU84_13055 IPR002509 Polysaccharide deacetylase RU84_13055 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RU84_13055 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB RU84_13055 IPR032772 RU84_13055 RU84_13060 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RU84_13065 IPR009822 YaeQ RU84_13065 IPR011335 Restriction endonuclease type II-like RU84_13065 IPR038590 RU84_13065 RU84_13070 IPR001991 Sodium:dicarboxylate symporter RU84_13070 IPR018107 Sodium:dicarboxylate symporter, conserved site RU84_13070 IPR036458 RU84_13070 RU84_13075 IPR003495 CobW/HypB/UreG domain RU84_13075 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_13085 IPR003736 Phenylacetic acid degradation-related domain RU84_13085 IPR006683 Thioesterase superfamily RU84_13085 IPR029069 HotDog domain RU84_13090 IPR002771 Multiple antibiotic resistance (MarC)-related RU84_13095 IPR000060 BCCT transporter family RU84_13095 IPR018093 BCCT transporter, conserved site RU84_13100 IPR000060 BCCT transporter family RU84_13100 IPR018093 BCCT transporter, conserved site RU84_13105 IPR001647 DNA-binding HTH domain, TetR-type RU84_13105 IPR009057 Homeodomain-like RU84_13105 IPR017757 Transcriptional repressor BetI RU84_13105 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RU84_13105 IPR036271 RU84_13105 RU84_13105 IPR039538 RU84_13105 RU84_13110 IPR011264 NAD/NADP-dependent betaine aldehyde dehydrogenase RU84_13110 IPR015590 Aldehyde dehydrogenase domain RU84_13110 IPR016160 Aldehyde dehydrogenase, cysteine active site RU84_13110 IPR016161 Aldehyde/histidinol dehydrogenase RU84_13110 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_13110 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_13110 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RU84_13115 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal RU84_13115 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RU84_13115 IPR011533 Oxygen-dependent choline dehydrogenase RU84_13115 IPR012132 Glucose-methanol-choline oxidoreductase RU84_13115 IPR027424 Glucose Oxidase, domain 2 RU84_13115 IPR036188 RU84_13115 RU84_13120 IPR006231 Malate:quinone-oxidoreductase RU84_13120 IPR036188 RU84_13120 RU84_13130 IPR003726 Homocysteine S-methyltransferase RU84_13130 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT RU84_13130 IPR036589 RU84_13130 RU84_13135 IPR002293 Amino acid/polyamine transporter I RU84_13135 IPR004754 Amino acid antiporter RU84_13140 IPR012908 GPI inositol-deacylase PGAP1-like RU84_13140 IPR029058 Alpha/Beta hydrolase fold RU84_13145 IPR010699 Protein of unknown function DUF1275 RU84_13155 IPR000847 Transcription regulator HTH, LysR RU84_13155 IPR005119 LysR, substrate-binding RU84_13155 IPR036388 RU84_13155 RU84_13155 IPR036390 RU84_13155 RU84_13160 IPR002220 DapA-like RU84_13160 IPR013785 Aldolase-type TIM barrel RU84_13165 IPR005828 General substrate transporter RU84_13165 IPR005829 Sugar transporter, conserved site RU84_13165 IPR036259 RU84_13165 RU84_13170 IPR005318 Outer membrane porin, bacterial RU84_13170 IPR023614 Porin domain RU84_13175 IPR001584 Integrase, catalytic core RU84_13175 IPR012337 Ribonuclease H-like domain RU84_13175 IPR025246 Transposase IS30-like HTH domain RU84_13175 IPR036397 RU84_13175 RU84_13195 IPR008727 PAAR motif RU84_13200 IPR008727 PAAR motif RU84_13215 IPR001650 Helicase, C-terminal RU84_13215 IPR011545 DEAD/DEAH box helicase domain RU84_13215 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RU84_13215 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_13220 IPR014976 Protein of unknown function DUF1837 RU84_13240 IPR008727 PAAR motif RU84_13250 IPR013423 Conserved hypothetical protein CHP02594 RU84_13255 IPR032124 RU84_13255 RU84_13280 IPR001650 Helicase, C-terminal RU84_13280 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RU84_13280 IPR006935 Helicase/UvrB domain RU84_13280 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RU84_13280 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_13280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_13320 IPR003305 Carbohydrate-binding, CenC-like RU84_13320 IPR015406 Domain of unknown function DUF1983 RU84_13320 IPR039477 RU84_13320 RU84_13390 IPR022225 Phage tail fibre protein RU84_13395 IPR036844 RU84_13395 RU84_13405 IPR000962 Zinc finger, DksA/TraR C4-type RU84_13455 IPR011664 Abortive infection system protein AbiD/AbiF-like RU84_13465 IPR009739 Protein of unknown function DUF1311 RU84_13490 IPR001387 Cro/C1-type helix-turn-helix domain RU84_13490 IPR010982 Lambda repressor-like, DNA-binding domain RU84_13495 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like RU84_13495 IPR036614 RU84_13495 RU84_13510 IPR002611 IstB-like ATP-binding protein RU84_13510 IPR003593 AAA+ ATPase domain RU84_13510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_13520 IPR001525 C-5 cytosine methyltransferase RU84_13520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_13560 IPR001387 Cro/C1-type helix-turn-helix domain RU84_13560 IPR010982 Lambda repressor-like, DNA-binding domain RU84_13565 IPR001387 Cro/C1-type helix-turn-helix domain RU84_13565 IPR010982 Lambda repressor-like, DNA-binding domain RU84_13565 IPR015927 Peptidase S24/S26A/S26B/S26C RU84_13565 IPR036286 RU84_13565 RU84_13580 IPR019276 Bacteriophage VT2phi272, P20 RU84_13600 IPR012337 Ribonuclease H-like domain RU84_13600 IPR013520 Exonuclease, RNase T/DNA polymerase III RU84_13600 IPR036397 RU84_13600 RU84_13605 IPR025153 Ead/Ea22-like protein RU84_13640 IPR014966 FRG domain RU84_13650 IPR036691 RU84_13650 RU84_13655 IPR002104 Integrase, catalytic RU84_13655 IPR010998 Integrase, Lambda-type, N-terminal RU84_13655 IPR011010 DNA breaking-rejoining enzyme, catalytic core RU84_13655 IPR013762 Integrase-like, catalytic core RU84_13655 IPR025166 Domain of unknown function DUF4102 RU84_13655 IPR038488 RU84_13655 RU84_13660 IPR000101 Gamma-glutamyltranspeptidase RU84_13660 IPR029055 Nucleophile aminohydrolases, N-terminal RU84_13665 IPR004638 Drug resistance transporter EmrB/QacA subfamily RU84_13665 IPR011701 Major facilitator superfamily RU84_13665 IPR036259 RU84_13665 RU84_13670 IPR003997 RTX secretion protein D, Gram-negative bacteria RU84_13670 IPR005694 Efflux pump membrane protein Emr RU84_13670 IPR039562 RU84_13670 RU84_13675 IPR003736 Phenylacetic acid degradation-related domain RU84_13675 IPR006683 Thioesterase superfamily RU84_13675 IPR029069 HotDog domain RU84_13680 IPR001731 Porphobilinogen synthase RU84_13680 IPR013785 Aldolase-type TIM barrel RU84_13680 IPR030656 RU84_13680 RU84_13685 IPR006076 FAD dependent oxidoreductase RU84_13685 IPR036188 RU84_13685 RU84_13690 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RU84_13690 IPR010099 Sugar nucleotide epimerase YfcH,-like putative RU84_13690 IPR013549 Domain of unknown function DUF1731 RU84_13690 IPR036291 RU84_13690 RU84_13700 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RU84_13705 IPR003718 OsmC/Ohr family RU84_13705 IPR015946 K homology domain-like, alpha/beta RU84_13705 IPR036102 RU84_13705 RU84_13710 IPR004593 Nuclease SbcCD subunit D RU84_13710 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RU84_13710 IPR026843 Nuclease SbcCD subunit D, C-terminal domain RU84_13710 IPR029052 Metallo-dependent phosphatase-like RU84_13715 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_13715 IPR038729 RU84_13715 RU84_13720 IPR001608 Alanine racemase, N-terminal RU84_13720 IPR011078 Uncharacterised protein family UPF0001 RU84_13720 IPR029066 PLP-binding barrel RU84_13725 IPR001482 Type II secretion system protein E RU84_13725 IPR003593 AAA+ ATPase domain RU84_13725 IPR006321 Pilus retraction protein PilT RU84_13725 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_13730 IPR001482 Type II secretion system protein E RU84_13730 IPR006321 Pilus retraction protein PilT RU84_13730 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_13735 IPR002481 Ferric-uptake regulator RU84_13735 IPR036388 RU84_13735 RU84_13735 IPR036390 RU84_13735 RU84_13740 IPR007450 Lipoprotein SmpA/OmlA RU84_13740 IPR026592 Outer membrane protein assembly factor BamE RU84_13740 IPR037873 RU84_13740 RU84_13745 IPR005346 RnfH protein RU84_13745 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RU84_13745 IPR037021 RU84_13745 RU84_13750 IPR037272 RU84_13750 RU84_13755 IPR012312 Haemerythrin/HHE cation-binding motif RU84_13755 IPR012827 Haemerythrin-like, metal-binding domain RU84_13755 IPR035938 RU84_13755 RU84_13760 IPR026869 Putative glutamine amidotransferase type 2 RU84_13760 IPR029055 Nucleophile aminohydrolases, N-terminal RU84_13765 IPR016181 Acyl-CoA N-acyltransferase RU84_13770 IPR001048 Aspartate/glutamate/uridylate kinase RU84_13770 IPR004662 Acetylglutamate kinase RU84_13770 IPR036393 RU84_13770 RU84_13770 IPR037528 RU84_13770 RU84_13775 IPR005841 Alpha-D-phosphohexomutase superfamily RU84_13775 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RU84_13775 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RU84_13775 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RU84_13775 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RU84_13775 IPR016066 Alpha-D-phosphohexomutase, conserved site RU84_13775 IPR036900 RU84_13775 RU84_13780 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase RU84_13780 IPR029054 dUTPase-like RU84_13780 IPR036157 RU84_13780 RU84_13785 IPR005752 DNA helicase, ATP-dependent, RepA type RU84_13785 IPR013986 DExx box DNA helicase domain RU84_13785 IPR014017 DNA helicase, UvrD-like, C-terminal RU84_13785 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_13785 IPR034739 RU84_13785 RU84_13790 IPR006664 Outer membrane protein, bacterial RU84_13790 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RU84_13790 IPR006690 Outer membrane protein, OmpA-like, conserved site RU84_13790 IPR036737 RU84_13790 RU84_13795 IPR002123 Phospholipid/glycerol acyltransferase RU84_13805 IPR005526 Septum formation inhibitor MinC, C-terminal RU84_13805 IPR013033 Septum formation inhibitor MinC RU84_13805 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal RU84_13805 IPR036145 RU84_13805 RU84_13810 IPR010223 ATP binding protein MinD, bacterial-type RU84_13810 IPR025501 ATP binding protein MinD RU84_13810 IPR025669 AAA domain RU84_13810 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_13815 IPR005527 Septum formation topological specificity factor MinE RU84_13815 IPR036707 RU84_13815 RU84_13830 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RU84_13830 IPR004778 Homoserine/Threonine efflux protein RU84_13835 IPR002543 FtsK domain RU84_13835 IPR018541 FtsK gamma domain RU84_13835 IPR025199 Domain of unknown function DUF4117 RU84_13835 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_13835 IPR036388 RU84_13835 RU84_13835 IPR036390 RU84_13835 RU84_13840 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RU84_13840 IPR005982 Thioredoxin reductase RU84_13840 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RU84_13840 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_13840 IPR036188 RU84_13840 RU84_13845 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase RU84_13845 IPR016181 Acyl-CoA N-acyltransferase RU84_13850 IPR007471 Arginine-tRNA-protein transferase, N-terminal RU84_13850 IPR007472 Arginine-tRNA-protein transferase, C-terminal RU84_13850 IPR016181 Acyl-CoA N-acyltransferase RU84_13850 IPR017138 Arginine-tRNA-protein transferase, predicted, prokaryotic RU84_13855 IPR000182 GNAT domain RU84_13855 IPR006464 Ribosomal-protein-alanine acetyltransferase RU84_13855 IPR016181 Acyl-CoA N-acyltransferase RU84_13860 IPR000726 Glycoside hydrolase, family 19, catalytic RU84_13860 IPR016516 Uncharacterised conserved protein UCP07580 RU84_13870 IPR000795 Elongation factor, GTP-binding domain RU84_13870 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RU84_13870 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RU84_13870 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RU84_13870 IPR005225 Small GTP-binding protein domain RU84_13870 IPR009000 Translation protein, beta-barrel domain RU84_13870 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RU84_13870 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_13870 IPR031157 RU84_13870 RU84_13875 IPR000640 Translation elongation factor EFG, V domain RU84_13875 IPR000795 Elongation factor, GTP-binding domain RU84_13875 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RU84_13875 IPR004540 Translation elongation factor EFG/EF2 RU84_13875 IPR005225 Small GTP-binding protein domain RU84_13875 IPR005517 Translation elongation factor EFG/EF2, domain IV RU84_13875 IPR009000 Translation protein, beta-barrel domain RU84_13875 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RU84_13875 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_13875 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_13875 IPR031157 RU84_13875 RU84_13875 IPR035647 RU84_13875 RU84_13880 IPR000235 Ribosomal protein S5/S7 RU84_13880 IPR005717 Ribosomal protein S7, bacterial/organellar-type RU84_13880 IPR020606 Ribosomal protein S7, conserved site RU84_13880 IPR023798 Ribosomal protein S7 domain RU84_13880 IPR036823 RU84_13880 RU84_13885 IPR005679 Ribosomal protein S12, bacteria RU84_13885 IPR006032 Ribosomal protein S12/S23 RU84_13885 IPR012340 Nucleic acid-binding, OB-fold RU84_13890 IPR024787 EcsC protein RU84_13895 IPR014030 Beta-ketoacyl synthase, N-terminal RU84_13895 IPR014031 Beta-ketoacyl synthase, C-terminal RU84_13895 IPR016039 Thiolase-like RU84_13895 IPR018201 Beta-ketoacyl synthase, active site RU84_13895 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RU84_13900 IPR005265 Uncharacterised protein family UPF0093 RU84_13905 IPR003829 Pirin, N-terminal domain RU84_13905 IPR008778 Pirin, C-terminal domain RU84_13905 IPR011051 RmlC-like cupin domain RU84_13905 IPR012093 Pirin RU84_13905 IPR014710 RmlC-like jelly roll fold RU84_13915 IPR003010 Carbon-nitrogen hydrolase RU84_13915 IPR003694 NAD(+) synthetase RU84_13915 IPR014445 Glutamine-dependent NAD(+) synthetase RU84_13915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_13915 IPR022310 NAD/GMP synthase RU84_13915 IPR036526 RU84_13915 RU84_13930 IPR000951 Phthalate dioxygenase reductase RU84_13930 IPR001041 2Fe-2S ferredoxin-type domain RU84_13930 IPR001433 Oxidoreductase FAD/NAD(P)-binding RU84_13930 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RU84_13930 IPR008333 Oxidoreductase, FAD-binding domain RU84_13930 IPR012675 Beta-grasp domain RU84_13930 IPR017938 Riboflavin synthase-like beta-barrel RU84_13930 IPR036010 RU84_13930 RU84_13930 IPR039003 RU84_13930 RU84_13930 IPR039261 RU84_13930 RU84_13935 IPR010102 Succinate semialdehyde dehydrogenase RU84_13935 IPR015590 Aldehyde dehydrogenase domain RU84_13935 IPR016160 Aldehyde dehydrogenase, cysteine active site RU84_13935 IPR016161 Aldehyde/histidinol dehydrogenase RU84_13935 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_13935 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_13935 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RU84_13940 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit RU84_13940 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RU84_13940 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RU84_13940 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RU84_13940 IPR036922 RU84_13940 RU84_13940 IPR039004 RU84_13940 RU84_13945 IPR013094 Alpha/beta hydrolase fold-3 RU84_13945 IPR029058 Alpha/Beta hydrolase fold RU84_13945 IPR033140 RU84_13945 RU84_13950 IPR000060 BCCT transporter family RU84_13955 IPR011829 Tartrate dehydrogenase RU84_13955 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RU84_13955 IPR024084 Isopropylmalate dehydrogenase-like domain RU84_13960 IPR000847 Transcription regulator HTH, LysR RU84_13960 IPR005119 LysR, substrate-binding RU84_13960 IPR036388 RU84_13960 RU84_13960 IPR036390 RU84_13960 RU84_13965 IPR010870 Phosphate-selective porin O/P RU84_13975 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RU84_13975 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RU84_13980 IPR001980 Coenzyme A biosynthesis protein RU84_13980 IPR004821 Cytidyltransferase-like domain RU84_13980 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_13985 IPR002104 Integrase, catalytic RU84_13985 IPR010998 Integrase, Lambda-type, N-terminal RU84_13985 IPR011010 DNA breaking-rejoining enzyme, catalytic core RU84_13985 IPR013762 Integrase-like, catalytic core RU84_13985 IPR025166 Domain of unknown function DUF4102 RU84_13985 IPR038488 RU84_13985 RU84_13995 IPR031876 RU84_13995 RU84_14000 IPR002196 Glycoside hydrolase, family 24 RU84_14000 IPR023346 Lysozyme-like domain RU84_14035 IPR014974 Domain of unknown function DUF1833 RU84_14065 IPR024410 Protein of unknown function DUF3647 RU84_14070 IPR032495 RU84_14070 RU84_14075 IPR021508 Protein of unknown function DUF3168 RU84_14080 IPR010064 Bacteriophage HK97-gp10, putative tail-component RU84_14085 IPR008767 Bacteriophage SPP1, head-tail adaptor RU84_14085 IPR038666 RU84_14085 RU84_14090 IPR021146 Phage gp6-like head-tail connector protein RU84_14095 IPR006427 Phage portal protein, HK97 RU84_14095 IPR006944 Bacteriophage/Gene transfer agent portal protein RU84_14100 IPR024455 Phage capsid RU84_14105 IPR006433 Prohead protease, HK97 family RU84_14115 IPR005021 Phage terminase RU84_14120 IPR005335 Terminase small subunit RU84_14120 IPR038713 RU84_14120 RU84_14125 IPR002711 HNH endonuclease RU84_14125 IPR003615 HNH nuclease RU84_14150 IPR010373 Protein of unknown function DUF968 RU84_14175 IPR011856 tRNA endonuclease-like domain RU84_14175 IPR014883 VRR-NUC domain RU84_14220 IPR003593 AAA+ ATPase domain RU84_14220 IPR007693 DNA helicase, DnaB-like, N-terminal RU84_14220 IPR007694 DNA helicase, DnaB-like, C-terminal RU84_14220 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RU84_14220 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_14220 IPR036185 RU84_14220 RU84_14225 IPR006497 Bacteriophage lambda, GpO, N-terminal RU84_14225 IPR036388 RU84_14225 RU84_14230 IPR010982 Lambda repressor-like, DNA-binding domain RU84_14235 IPR010982 Lambda repressor-like, DNA-binding domain RU84_14240 IPR001387 Cro/C1-type helix-turn-helix domain RU84_14240 IPR010982 Lambda repressor-like, DNA-binding domain RU84_14240 IPR015927 Peptidase S24/S26A/S26B/S26C RU84_14240 IPR036286 RU84_14240 RU84_14255 IPR001584 Integrase, catalytic core RU84_14255 IPR012337 Ribonuclease H-like domain RU84_14255 IPR025246 Transposase IS30-like HTH domain RU84_14255 IPR036397 RU84_14255 RU84_14285 IPR007539 Domain of unknown function DUF551 RU84_14290 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_14315 IPR010260 Bacteriophage P4, Orf88 RU84_14320 IPR000037 SsrA-binding protein RU84_14320 IPR020081 SsrA-binding protein, conserved site RU84_14320 IPR023620 Small protein B RU84_14325 IPR001226 Flavodoxin, conserved site RU84_14325 IPR005025 NADPH-dependent FMN reductase-like RU84_14325 IPR029039 Flavoprotein-like RU84_14330 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RU84_14330 IPR011324 Cytotoxic necrotizing factor-like, catalytic RU84_14330 IPR038371 RU84_14330 RU84_14335 IPR002942 RNA-binding S4 domain RU84_14335 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RU84_14335 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RU84_14335 IPR006225 Pseudouridine synthase, RluC/RluD RU84_14335 IPR020103 Pseudouridine synthase, catalytic domain RU84_14335 IPR036986 RU84_14335 RU84_14340 IPR011990 Tetratricopeptide-like helical domain RU84_14340 IPR017689 Outer membrane protein assembly factor BamD RU84_14340 IPR039565 RU84_14340 RU84_14345 IPR002694 Zinc finger, CHC2-type RU84_14345 IPR006171 Toprim domain RU84_14345 IPR013264 DNA primase, catalytic core, N-terminal RU84_14345 IPR019475 DNA primase, DnaB-helicase binding domain RU84_14345 IPR030846 RU84_14345 RU84_14345 IPR036977 RU84_14345 RU84_14345 IPR037068 RU84_14345 RU84_14350 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase RU84_14350 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RU84_14350 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal RU84_14350 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain RU84_14350 IPR018214 Glutamyl-tRNA reductase, conserved site RU84_14350 IPR036291 RU84_14350 RU84_14350 IPR036343 RU84_14350 RU84_14350 IPR036453 RU84_14350 RU84_14355 IPR011990 Tetratricopeptide-like helical domain RU84_14355 IPR019734 Tetratricopeptide repeat RU84_14360 IPR004565 Outer membrane lipoprotein LolB RU84_14360 IPR029046 Lipoprotein localisation LolA/LolB/LppX RU84_14365 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase RU84_14365 IPR006204 GHMP kinase N-terminal domain RU84_14365 IPR013750 GHMP kinase, C-terminal domain RU84_14365 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RU84_14365 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_14365 IPR036554 RU84_14365 RU84_14390 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site RU84_14390 IPR005946 Ribose-phosphate diphosphokinase RU84_14390 IPR029057 Phosphoribosyltransferase-like RU84_14390 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain RU84_14390 IPR037515 RU84_14390 RU84_14395 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain RU84_14395 IPR020055 Ribosomal protein L25, short-form RU84_14395 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain RU84_14395 IPR029751 Ribosomal protein L25 RU84_14400 IPR001328 Peptidyl-tRNA hydrolase RU84_14400 IPR018171 Peptidyl-tRNA hydrolase, conserved site RU84_14400 IPR036416 RU84_14400 RU84_14405 IPR003190 Aspartate decarboxylase RU84_14405 IPR009010 Aspartate decarboxylase-like domain RU84_14410 IPR025833 GDYXXLXY protein RU84_14415 IPR018677 Protein of unknown function DUF2157, membrane RU84_14415 IPR025513 Domain of unknown function DUF4401 RU84_14420 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB RU84_14420 IPR017945 DHBP synthase RibB-like alpha/beta domain RU84_14425 IPR006439 HAD hydrolase, subfamily IA RU84_14425 IPR023198 Phosphoglycolate phosphatase, domain 2 RU84_14425 IPR023214 HAD-like domain RU84_14425 IPR036412 RU84_14425 RU84_14430 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RU84_14430 IPR029056 Ribokinase-like RU84_14435 IPR007055 BON domain RU84_14435 IPR018392 LysM domain RU84_14435 IPR036779 RU84_14435 RU84_14440 IPR003231 Acyl carrier protein (ACP) RU84_14440 IPR006162 Phosphopantetheine attachment site RU84_14440 IPR009081 Acyl carrier protein-like RU84_14440 IPR036736 RU84_14440 RU84_14445 IPR002347 Glucose/ribitol dehydrogenase RU84_14445 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RU84_14445 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_14445 IPR036291 RU84_14445 RU84_14450 IPR001227 Acyl transferase domain RU84_14450 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type RU84_14450 IPR014043 Acyl transferase RU84_14450 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RU84_14450 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RU84_14450 IPR020801 Polyketide synthase, acyl transferase domain RU84_14450 IPR024925 Malonyl CoA-acyl carrier protein transacylase RU84_14455 IPR002677 Ribosomal protein L32p RU84_14455 IPR011332 Zinc-binding ribosomal protein RU84_14460 IPR003772 Protein of unknown function DUF177 RU84_14465 IPR007411 Protein of unknown function DUF462 RU84_14470 IPR006070 YrdC-like domain RU84_14470 IPR017945 DHBP synthase RibB-like alpha/beta domain RU84_14475 IPR003768 Prokaryotic chromosome segregation/condensation protein ScpA RU84_14480 IPR005234 Chromosome segregation/condensation protein ScpB RU84_14480 IPR036388 RU84_14480 RU84_14480 IPR036390 RU84_14480 RU84_14485 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RU84_14485 IPR002942 RNA-binding S4 domain RU84_14485 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RU84_14485 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RU84_14485 IPR020103 Pseudouridine synthase, catalytic domain RU84_14485 IPR036986 RU84_14485 RU84_14490 IPR004472 Dethiobiotin synthase BioD RU84_14490 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_14495 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC RU84_14495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_14500 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RU84_14500 IPR004839 Aminotransferase, class I/classII RU84_14500 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_14500 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_14500 IPR015424 Pyridoxal phosphate-dependent transferase RU84_14505 IPR005814 Aminotransferase class-III RU84_14505 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA RU84_14505 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_14505 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_14505 IPR015424 Pyridoxal phosphate-dependent transferase RU84_14510 IPR029058 Alpha/Beta hydrolase fold RU84_14515 IPR003337 Trehalose-phosphatase RU84_14515 IPR006379 HAD-superfamily hydrolase, subfamily IIB RU84_14515 IPR023214 HAD-like domain RU84_14515 IPR036412 RU84_14515 RU84_14520 IPR001830 Glycosyl transferase, family 20 RU84_14525 IPR011701 Major facilitator superfamily RU84_14525 IPR036259 RU84_14525 RU84_14530 IPR002024 Bacterioferritin RU84_14530 IPR008331 Ferritin/DPS protein domain RU84_14530 IPR009078 Ferritin-like superfamily RU84_14530 IPR012347 Ferritin-related RU84_14535 IPR001357 BRCT domain RU84_14535 IPR001679 NAD-dependent DNA ligase RU84_14535 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RU84_14535 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type RU84_14535 IPR004150 NAD-dependent DNA ligase, OB-fold RU84_14535 IPR010994 RuvA domain 2-like RU84_14535 IPR012340 Nucleic acid-binding, OB-fold RU84_14535 IPR013839 NAD-dependent DNA ligase, adenylation RU84_14535 IPR013840 NAD-dependent DNA ligase, N-terminal RU84_14535 IPR018239 NAD-dependent DNA ligase, active site RU84_14535 IPR033136 RU84_14535 RU84_14535 IPR036420 RU84_14535 RU84_14540 IPR007449 ZipA, C-terminal FtsZ-binding domain RU84_14540 IPR036765 RU84_14540 RU84_14545 IPR003395 RecF/RecN/SMC, N-terminal RU84_14545 IPR011890 Structural maintenance of chromosomes protein, prokaryotic RU84_14545 IPR024704 Structural maintenance of chromosomes protein RU84_14545 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_14545 IPR036277 RU84_14545 RU84_14550 IPR000524 Transcription regulator HTH, GntR RU84_14550 IPR008920 Transcription regulator FadR/GntR, C-terminal RU84_14550 IPR011711 GntR, C-terminal RU84_14550 IPR036388 RU84_14550 RU84_14550 IPR036390 RU84_14550 RU84_14555 IPR002781 Transmembrane protein TauE like RU84_14560 IPR004143 Biotin/lipoate A/B protein ligase RU84_14560 IPR004408 Biotin--acetyl-CoA-carboxylase ligase RU84_14565 IPR004619 Type III pantothenate kinase RU84_14570 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RU84_14570 IPR003593 AAA+ ATPase domain RU84_14570 IPR004125 Signal recognition particle, SRP54 subunit, M-domain RU84_14570 IPR004780 Signal recognition particle protein Ffh RU84_14570 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle RU84_14570 IPR022941 Signal recognition particle, SRP54 subunit RU84_14570 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_14570 IPR036891 RU84_14570 RU84_14575 IPR002541 Cytochrome c assembly protein RU84_14580 IPR001269 tRNA-dihydrouridine synthase RU84_14580 IPR013785 Aldolase-type TIM barrel RU84_14580 IPR018517 tRNA-dihydrouridine synthase, conserved site RU84_14580 IPR032886 RU84_14580 RU84_14610 IPR011962 Deoxycytidine triphosphate deaminase RU84_14610 IPR029054 dUTPase-like RU84_14610 IPR036157 RU84_14610 RU84_14615 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RU84_14620 IPR018639 Domain of unknown function DUF2062 RU84_14625 IPR000845 Nucleoside phosphorylase domain RU84_14625 IPR035994 RU84_14625 RU84_14635 IPR000808 Mrp, conserved site RU84_14635 IPR019591 Mrp/NBP35 ATP-binding protein RU84_14635 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_14635 IPR033756 RU84_14635 RU84_14645 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RU84_14645 IPR002547 tRNA-binding domain RU84_14645 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal RU84_14645 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RU84_14645 IPR012340 Nucleic acid-binding, OB-fold RU84_14645 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RU84_14645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_14645 IPR014758 Methionyl-tRNA synthetase RU84_14645 IPR015413 Methionyl/Leucyl tRNA synthetase RU84_14645 IPR023458 Methionine-tRNA ligase, type 1 RU84_14645 IPR029038 Methionyl-tRNA synthetase, Zn-domain RU84_14645 IPR033911 RU84_14645 RU84_14655 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RU84_14660 IPR001647 DNA-binding HTH domain, TetR-type RU84_14660 IPR009057 Homeodomain-like RU84_14660 IPR036271 RU84_14660 RU84_14665 IPR011701 Major facilitator superfamily RU84_14665 IPR036259 RU84_14665 RU84_14670 IPR003997 RTX secretion protein D, Gram-negative bacteria RU84_14670 IPR039562 RU84_14670 RU84_14675 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RU84_14675 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase RU84_14675 IPR036052 RU84_14675 RU84_14680 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like RU84_14680 IPR023166 HI0933 insert-like domain RU84_14680 IPR036188 RU84_14680 RU84_14690 IPR008910 Conserved TM helix RU84_14705 IPR001221 Phenol hydroxylase reductase RU84_14705 IPR001433 Oxidoreductase FAD/NAD(P)-binding RU84_14705 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RU84_14705 IPR008333 Oxidoreductase, FAD-binding domain RU84_14705 IPR017938 Riboflavin synthase-like beta-barrel RU84_14705 IPR039261 RU84_14705 RU84_14710 IPR000847 Transcription regulator HTH, LysR RU84_14710 IPR005119 LysR, substrate-binding RU84_14710 IPR036388 RU84_14710 RU84_14710 IPR036390 RU84_14710 RU84_14715 IPR002059 Cold-shock protein, DNA-binding RU84_14715 IPR011129 Cold shock protein RU84_14715 IPR012156 Cold shock, CspA RU84_14715 IPR012340 Nucleic acid-binding, OB-fold RU84_14720 IPR005765 Uracil phosphoribosyl transferase RU84_14720 IPR029057 Phosphoribosyltransferase-like RU84_14720 IPR034332 RU84_14720 RU84_14725 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RU84_14725 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 RU84_14730 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RU84_14730 IPR003918 NADH:ubiquinone oxidoreductase RU84_14730 IPR010227 NADH-quinone oxidoreductase, chain M/4 RU84_14735 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal RU84_14735 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RU84_14735 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 RU84_14735 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup RU84_14740 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K RU84_14740 IPR039428 RU84_14740 RU84_14745 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 RU84_14750 IPR010226 NADH-quinone oxidoreductase, chain I RU84_14750 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RU84_14750 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RU84_14755 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H RU84_14755 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site RU84_14760 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site RU84_14760 IPR006656 Molybdopterin oxidoreductase RU84_14760 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RU84_14760 IPR009010 Aspartate decarboxylase-like domain RU84_14760 IPR010228 NADH:ubiquinone oxidoreductase, subunit G RU84_14760 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding RU84_14760 IPR036010 RU84_14760 RU84_14765 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site RU84_14765 IPR011537 NADH ubiquinone oxidoreductase, F subunit RU84_14765 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit RU84_14765 IPR019554 Soluble ligand binding domain RU84_14765 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding RU84_14765 IPR037207 RU84_14765 RU84_14765 IPR037225 RU84_14765 RU84_14770 IPR002023 NADH-quinone oxidoreductase subunit E-like RU84_14770 IPR036249 RU84_14770 RU84_14775 IPR001135 NADH-quinone oxidoreductase, subunit D RU84_14775 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit RU84_14775 IPR010218 NADH dehydrogenase, subunit C RU84_14775 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site RU84_14775 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site RU84_14775 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H RU84_14775 IPR023062 NADH dehydrogenase, subunit CD RU84_14775 IPR029014 NiFe hydrogenase-like RU84_14775 IPR037232 RU84_14775 RU84_14775 IPR038290 RU84_14775 RU84_14780 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit RU84_14780 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit RU84_14785 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 RU84_14785 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid RU84_14785 IPR038430 RU84_14785 RU84_14790 IPR000160 GGDEF domain RU84_14790 IPR029787 Nucleotide cyclase RU84_14800 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_14800 IPR003660 HAMP linker domain RU84_14800 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RU84_14800 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RU84_14800 IPR036097 RU84_14800 RU84_14800 IPR036890 RU84_14800 RU84_14805 IPR001789 Signal transduction response regulator, receiver domain RU84_14805 IPR001867 Signal transduction response regulator, C-terminal RU84_14805 IPR011006 CheY-like superfamily RU84_14805 IPR016032 Signal transduction response regulator, C-terminal effector RU84_14805 IPR036388 RU84_14805 RU84_14815 IPR000788 Ribonucleotide reductase large subunit, C-terminal RU84_14815 IPR005144 ATP-cone RU84_14815 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal RU84_14815 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent RU84_14815 IPR013346 Ribonucleotide reductase, class I , alpha subunit RU84_14815 IPR013509 Ribonucleotide reductase large subunit, N-terminal RU84_14825 IPR000358 Ribonucleotide reductase small subunit RU84_14825 IPR009078 Ferritin-like superfamily RU84_14825 IPR012348 Ribonucleotide reductase-related RU84_14835 IPR001647 DNA-binding HTH domain, TetR-type RU84_14835 IPR009057 Homeodomain-like RU84_14840 IPR031409 RU84_14840 RU84_14845 IPR007560 Restriction endonuclease type IV, Mrr RU84_14845 IPR010359 Protein of unknown function DUF955 RU84_14845 IPR011335 Restriction endonuclease type II-like RU84_14850 IPR001647 DNA-binding HTH domain, TetR-type RU84_14850 IPR009057 Homeodomain-like RU84_14860 IPR002563 Flavin reductase-like, FMN-binding RU84_14860 IPR012349 FMN-binding split barrel RU84_14865 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal RU84_14865 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit RU84_14865 IPR038071 RU84_14865 RU84_14870 IPR015004 Protein of unknown function DUF1852 RU84_14880 IPR009057 Homeodomain-like RU84_14880 IPR018060 DNA binding HTH domain, AraC-type RU84_14880 IPR020449 Transcription regulator HTH, AraC- type RU84_14880 IPR032687 RU84_14880 RU84_14885 IPR002933 Peptidase M20 RU84_14885 IPR011650 Peptidase M20, dimerisation domain RU84_14885 IPR017439 Amidohydrolase RU84_14885 IPR036264 RU84_14885 RU84_14895 IPR000847 Transcription regulator HTH, LysR RU84_14895 IPR005119 LysR, substrate-binding RU84_14895 IPR036388 RU84_14895 RU84_14895 IPR036390 RU84_14895 RU84_14900 IPR005829 Sugar transporter, conserved site RU84_14900 IPR011701 Major facilitator superfamily RU84_14900 IPR036259 RU84_14900 RU84_14910 IPR000847 Transcription regulator HTH, LysR RU84_14910 IPR005119 LysR, substrate-binding RU84_14910 IPR036388 RU84_14910 RU84_14910 IPR036390 RU84_14910 RU84_14915 IPR003953 FAD binding domain RU84_14915 IPR012831 Precorrin 3B synthase CobZ RU84_14915 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RU84_14915 IPR036188 RU84_14915 RU84_14920 IPR009051 Alpha-helical ferredoxin RU84_14920 IPR012830 Citrate utilization protein B RU84_14920 IPR036197 RU84_14920 RU84_14925 IPR007065 HPP RU84_14930 IPR001647 DNA-binding HTH domain, TetR-type RU84_14930 IPR009057 Homeodomain-like RU84_14930 IPR036271 RU84_14930 RU84_14935 IPR003673 CoA-transferase family III RU84_14935 IPR023606 CoA-transferase family III domain RU84_14940 IPR011701 Major facilitator superfamily RU84_14940 IPR036259 RU84_14940 RU84_14945 IPR006089 Acyl-CoA dehydrogenase, conserved site RU84_14945 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_14945 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_14945 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_14945 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_14945 IPR036250 RU84_14945 RU84_14945 IPR037069 RU84_14945 RU84_14950 IPR000847 Transcription regulator HTH, LysR RU84_14950 IPR005119 LysR, substrate-binding RU84_14950 IPR036388 RU84_14950 RU84_14950 IPR036390 RU84_14950 RU84_14955 IPR011032 GroES (chaperonin 10)-like RU84_14955 IPR013149 Alcohol dehydrogenase, C-terminal RU84_14955 IPR013154 Alcohol dehydrogenase GroES-like RU84_14955 IPR036291 RU84_14955 RU84_14960 IPR001365 Adenosine/AMP deaminase domain RU84_14960 IPR006330 Adenosine/adenine deaminase RU84_14960 IPR028893 Adenosine deaminase RU84_14960 IPR032466 RU84_14960 RU84_14985 IPR003473 Quinolinate synthetase A RU84_14985 IPR023513 Quinolinate synthase A, type 1 RU84_14985 IPR036094 RU84_14985 RU84_14990 IPR002813 Arginine biosynthesis protein ArgJ RU84_14990 IPR016117 ArgJ-like domain RU84_14995 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RU84_14995 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RU84_14995 IPR023546 Methylated-DNA--protein-cysteine methyltransferase RU84_14995 IPR036217 RU84_14995 RU84_14995 IPR036388 RU84_14995 RU84_14995 IPR036631 RU84_14995 RU84_15000 IPR000390 Small multidrug resistance protein family RU84_15005 IPR002524 Cation efflux protein RU84_15005 IPR027469 Cation efflux protein transmembrane domain RU84_15005 IPR036163 RU84_15005 RU84_15010 IPR007939 Copper resistance B precursor RU84_15010 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RU84_15015 IPR001117 Multicopper oxidase, type 1 RU84_15015 IPR002355 Multicopper oxidase, copper-binding site RU84_15015 IPR006376 Copper-resistance protein CopA RU84_15015 IPR008972 Cupredoxin RU84_15015 IPR011706 Multicopper oxidase, type 2 RU84_15015 IPR011707 Multicopper oxidase, type 3 RU84_15015 IPR033138 RU84_15015 RU84_15025 IPR000150 Cof protein RU84_15025 IPR006379 HAD-superfamily hydrolase, subfamily IIB RU84_15025 IPR023214 HAD-like domain RU84_15025 IPR036412 RU84_15025 RU84_15030 IPR000056 Ribulose-phosphate 3-epimerase-like RU84_15030 IPR011060 Ribulose-phosphate binding barrel RU84_15030 IPR013785 Aldolase-type TIM barrel RU84_15030 IPR026019 Ribulose-phosphate 3-epimerase RU84_15035 IPR014543 Uncharacterised conserved protein UCP028291 RU84_15040 IPR000801 Putative esterase RU84_15040 IPR014186 S-formylglutathione hydrolase RU84_15040 IPR029058 Alpha/Beta hydrolase fold RU84_15045 IPR001096 Peptidase C13, legumain RU84_15045 IPR029030 Caspase-like domain RU84_15050 IPR007536 Ribosomal RNA small subunit methyltransferase J RU84_15050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_15055 IPR000905 Gcp-like domain RU84_15055 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ RU84_15060 IPR001451 Bacterial transferase hexapeptide repeat RU84_15060 IPR011004 Trimeric LpxA-like RU84_15065 IPR000086 NUDIX hydrolase domain RU84_15065 IPR015797 NUDIX hydrolase domain-like RU84_15070 IPR000086 NUDIX hydrolase domain RU84_15070 IPR015797 NUDIX hydrolase domain-like RU84_15070 IPR029401 Nudix hydrolase, N-terminal RU84_15085 IPR005017 Membrane protein, aromatic hydrocarbon degradation RU84_15095 IPR001584 Integrase, catalytic core RU84_15095 IPR012337 Ribonuclease H-like domain RU84_15095 IPR025246 Transposase IS30-like HTH domain RU84_15095 IPR036397 RU84_15095 RU84_15100 IPR005074 Peptidase C39, bacteriocin processing RU84_15110 IPR005801 ADC synthase RU84_15110 IPR006805 Anthranilate synthase component I, N-terminal RU84_15110 IPR015890 Chorismate binding, C-terminal RU84_15110 IPR019999 Anthranilate synthase component I - like RU84_15115 IPR004839 Aminotransferase, class I/classII RU84_15115 IPR005861 Histidinol-phosphate aminotransferase family RU84_15115 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_15115 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_15115 IPR015424 Pyridoxal phosphate-dependent transferase RU84_15120 IPR001692 Histidinol dehydrogenase, conserved site RU84_15120 IPR012131 Histidinol dehydrogenase RU84_15120 IPR016161 Aldehyde/histidinol dehydrogenase RU84_15120 IPR022695 Histidinol dehydrogenase, monofunctional RU84_15125 IPR013820 ATP phosphoribosyltransferase, catalytic domain RU84_15125 IPR018198 ATP phosphoribosyltransferase, conserved site RU84_15125 IPR024893 ATP phosphoribosyltransferase HisG, short form RU84_15130 IPR001986 Enolpyruvate transferase domain RU84_15130 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase RU84_15130 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RU84_15130 IPR036968 RU84_15130 RU84_15135 IPR002634 BolA protein RU84_15135 IPR036065 RU84_15135 RU84_15140 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein RU84_15140 IPR036567 RU84_15140 RU84_15145 IPR000394 RNA polymerase sigma factor 54 RU84_15145 IPR007046 RNA polymerase sigma factor 54, core-binding RU84_15145 IPR007634 RNA polymerase sigma factor 54, DNA-binding RU84_15145 IPR038709 RU84_15145 RU84_15175 IPR007428 VacJ-like lipoprotein RU84_15180 IPR001932 Protein phosphatase 2C (PP2C)-like domain RU84_15180 IPR036457 RU84_15180 RU84_15185 IPR002645 STAS domain RU84_15185 IPR036513 RU84_15185 RU84_15190 IPR001110 Uncharacterised protein family UPF0012, conserved site RU84_15190 IPR003010 Carbon-nitrogen hydrolase RU84_15190 IPR036526 RU84_15190 RU84_15195 IPR032538 RU84_15195 RU84_15200 IPR000835 MarR-type HTH domain RU84_15200 IPR036388 RU84_15200 RU84_15200 IPR036390 RU84_15200 RU84_15205 IPR003718 OsmC/Ohr family RU84_15205 IPR015946 K homology domain-like, alpha/beta RU84_15205 IPR019953 Organic hydroperoxide resistance protein famiy RU84_15205 IPR036102 RU84_15205 RU84_15210 IPR001482 Type II secretion system protein E RU84_15210 IPR003593 AAA+ ATPase domain RU84_15210 IPR013369 Type II secretion system GspE RU84_15210 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_15210 IPR037257 RU84_15210 RU84_15220 IPR006685 Mechanosensitive ion channel MscS RU84_15220 IPR010920 Like-Sm (LSM) domain RU84_15220 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 RU84_15220 IPR011066 Mechanosensitive ion channel MscS, C-terminal RU84_15220 IPR023408 RU84_15220 RU84_15225 IPR019286 Protein of unknown function DUF2339, transmembrane RU84_15230 IPR001098 DNA-directed DNA polymerase, family A, palm domain RU84_15230 IPR002298 DNA polymerase A RU84_15230 IPR002421 5'-3' exonuclease, N-terminal RU84_15230 IPR002562 3'-5' exonuclease domain RU84_15230 IPR008918 Helix-hairpin-helix motif, class 2 RU84_15230 IPR012337 Ribonuclease H-like domain RU84_15230 IPR018320 DNA polymerase 1 RU84_15230 IPR019760 DNA-directed DNA polymerase, family A, conserved site RU84_15230 IPR020045 5'-3' exonuclease, C-terminal domain RU84_15230 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal RU84_15230 IPR029060 PIN domain-like RU84_15230 IPR036279 RU84_15230 RU84_15230 IPR036397 RU84_15230 RU84_15235 IPR003425 Uncharacterised protein family Ycf19 RU84_15240 IPR000304 Pyrroline-5-carboxylate reductase RU84_15240 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RU84_15240 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RU84_15240 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain RU84_15240 IPR036291 RU84_15240 RU84_15245 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase RU84_15245 IPR012094 Lysidine-tRNA(Ile) synthetase RU84_15245 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal RU84_15245 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal RU84_15245 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_15245 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain RU84_15250 IPR001095 Acetyl-CoA carboxylase, alpha subunit RU84_15250 IPR029045 ClpP/crotonase-like domain RU84_15255 IPR003695 Ppx/GppA phosphatase RU84_15255 IPR006674 HD domain RU84_15255 IPR022371 Exopolyphosphatase RU84_15255 IPR030673 RU84_15255 RU84_15260 IPR005746 Thioredoxin RU84_15260 IPR013766 Thioredoxin domain RU84_15260 IPR017937 Thioredoxin, conserved site RU84_15260 IPR036249 RU84_15260 RU84_15265 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RU84_15265 IPR003593 AAA+ ATPase domain RU84_15265 IPR004665 Transcription termination factor Rho RU84_15265 IPR011112 Rho termination factor, N-terminal RU84_15265 IPR011113 Rho termination factor, RNA-binding RU84_15265 IPR011129 Cold shock protein RU84_15265 IPR012340 Nucleic acid-binding, OB-fold RU84_15265 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_15265 IPR036269 RU84_15265 RU84_15275 IPR000119 Histone-like bacterial DNA-binding protein RU84_15275 IPR005684 Integration host factor, alpha subunit RU84_15275 IPR010992 Integration host factor (IHF)-like DNA-binding domain RU84_15275 IPR020816 Histone-like DNA-binding protein, conserved site RU84_15280 IPR002547 tRNA-binding domain RU84_15280 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit RU84_15280 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding RU84_15280 IPR005146 B3/B4 tRNA-binding domain RU84_15280 IPR005147 tRNA synthetase, B5-domain RU84_15280 IPR009061 DNA binding domain, putative RU84_15280 IPR012340 Nucleic acid-binding, OB-fold RU84_15280 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RU84_15280 IPR036690 RU84_15280 RU84_15285 IPR002319 Phenylalanyl-tRNA synthetase RU84_15285 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal RU84_15285 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit RU84_15285 IPR010978 tRNA-binding arm RU84_15285 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial RU84_15300 IPR001387 Cro/C1-type helix-turn-helix domain RU84_15300 IPR010359 Protein of unknown function DUF955 RU84_15300 IPR010982 Lambda repressor-like, DNA-binding domain RU84_15305 IPR005813 Ribosomal protein L20 RU84_15305 IPR035566 RU84_15305 RU84_15310 IPR001706 Ribosomal protein L35, non-mitochondrial RU84_15310 IPR018265 Ribosomal protein L35, conserved site RU84_15310 IPR021137 Ribosomal protein L35 RU84_15310 IPR037229 RU84_15310 RU84_15315 IPR010290 Transmembrane secretion effector RU84_15315 IPR036259 RU84_15315 RU84_15320 IPR020143 Uncharacterised protein family, RP436 RU84_15320 IPR032816 RU84_15320 RU84_15325 IPR004045 Glutathione S-transferase, N-terminal RU84_15325 IPR004046 Glutathione S-transferase, C-terminal RU84_15325 IPR036249 RU84_15325 RU84_15325 IPR036282 RU84_15325 RU84_15330 IPR001288 Translation initiation factor 3 RU84_15330 IPR019814 Translation initiation factor 3, N-terminal RU84_15330 IPR019815 Translation initiation factor 3, C-terminal RU84_15330 IPR036787 RU84_15330 RU84_15330 IPR036788 RU84_15330 RU84_15335 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RU84_15335 IPR002320 Threonine-tRNA ligase, class IIa RU84_15335 IPR004095 TGS RU84_15335 IPR004154 Anticodon-binding RU84_15335 IPR012675 Beta-grasp domain RU84_15335 IPR012676 TGS-like RU84_15335 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RU84_15335 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain RU84_15335 IPR036621 RU84_15335 RU84_15340 IPR000873 AMP-dependent synthetase/ligase RU84_15340 IPR020845 AMP-binding, conserved site RU84_15340 IPR025110 AMP-binding enzyme C-terminal domain RU84_15345 IPR006839 Ribosome-associated, YjgA RU84_15345 IPR023153 PSPTO4464-like domain RU84_15350 IPR000032 Phosphocarrier HPr protein-like RU84_15350 IPR035895 RU84_15350 RU84_15355 IPR005337 ATPase, P-loop-containing RU84_15355 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_15360 IPR003721 Pantoate-beta-alanine ligase RU84_15360 IPR004821 Cytidyltransferase-like domain RU84_15360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_15365 IPR003700 Ketopantoate hydroxymethyltransferase RU84_15365 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RU84_15370 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK RU84_15370 IPR035907 RU84_15370 RU84_15375 IPR002646 Poly A polymerase, head domain RU84_15375 IPR010206 Poly(A) polymerase I RU84_15375 IPR025866 Polymerase A arginine-rich C-terminal domain RU84_15375 IPR032828 RU84_15375 RU84_15380 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RU84_15380 IPR004509 Competence protein ComEA, helix-hairpin-helix domain RU84_15380 IPR010994 RuvA domain 2-like RU84_15385 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core RU84_15385 IPR011551 NTP pyrophosphohydrolase MazG, bacterial RU84_15390 IPR002347 Glucose/ribitol dehydrogenase RU84_15390 IPR036291 RU84_15390 RU84_15395 IPR002912 ACT domain RU84_15395 IPR003607 HD/PDEase domain RU84_15395 IPR004095 TGS RU84_15395 IPR004811 RelA/SpoT family RU84_15395 IPR007685 RelA/SpoT RU84_15395 IPR012675 Beta-grasp domain RU84_15395 IPR012676 TGS-like RU84_15400 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD RU84_15400 IPR010280 (Uracil-5)-methyltransferase family RU84_15400 IPR012340 Nucleic acid-binding, OB-fold RU84_15400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_15400 IPR030390 RU84_15400 RU84_15405 IPR012337 Ribonuclease H-like domain RU84_15405 IPR019288 Predicted 3'-5' exonuclease, PolB-like RU84_15405 IPR036397 RU84_15405 RU84_15410 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RU84_15410 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RU84_15410 IPR005856 Cysteine synthase K/M RU84_15410 IPR005858 Cysteine synthase B RU84_15410 IPR036052 RU84_15410 RU84_15415 IPR001789 Signal transduction response regulator, receiver domain RU84_15415 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_15415 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RU84_15415 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RU84_15415 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RU84_15415 IPR011006 CheY-like superfamily RU84_15415 IPR036097 RU84_15415 RU84_15415 IPR036641 RU84_15415 RU84_15415 IPR036890 RU84_15415 RU84_15420 IPR001753 Crotonase superfamily RU84_15420 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RU84_15420 IPR029045 ClpP/crotonase-like domain RU84_15425 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RU84_15425 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RU84_15425 IPR013328 Dehydrogenase, multihelical RU84_15425 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type RU84_15425 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RU84_15425 IPR036291 RU84_15425 RU84_15430 IPR013022 Xylose isomerase-like, TIM barrel domain RU84_15430 IPR026040 Hydroxypyruvate isomerase-like RU84_15430 IPR036237 RU84_15430 RU84_15435 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RU84_15440 IPR002347 Glucose/ribitol dehydrogenase RU84_15440 IPR036291 RU84_15440 RU84_15445 IPR012136 NADP transhydrogenase, beta subunit RU84_15445 IPR029035 DHS-like NAD/FAD-binding domain RU84_15445 IPR034300 RU84_15445 RU84_15450 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal RU84_15455 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RU84_15455 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RU84_15455 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 RU84_15455 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 RU84_15455 IPR036291 RU84_15455 RU84_15460 IPR000620 Drug/metabolite transporter RU84_15465 IPR006175 YjgF/Yer057p/UK114 family RU84_15465 IPR035959 RU84_15465 RU84_15470 IPR011701 Major facilitator superfamily RU84_15470 IPR036259 RU84_15470 RU84_15475 IPR025683 Protein beta RU84_15480 IPR010359 Protein of unknown function DUF955 RU84_15480 IPR010982 Lambda repressor-like, DNA-binding domain RU84_15485 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative RU84_15495 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RU84_15495 IPR036188 RU84_15495 RU84_15500 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RU84_15500 IPR005982 Thioredoxin reductase RU84_15500 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RU84_15500 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RU84_15500 IPR036188 RU84_15500 RU84_15505 IPR005025 NADPH-dependent FMN reductase-like RU84_15505 IPR014063 Arsenate resistance ArsH RU84_15505 IPR029039 Flavoprotein-like RU84_15510 IPR002657 Bile acid:sodium symporter RU84_15510 IPR004706 Arsenical-resistance protein ACR3 RU84_15510 IPR038770 RU84_15510 RU84_15515 IPR023485 Phosphotyrosine protein phosphatase I superfamily RU84_15515 IPR036196 RU84_15515 RU84_15520 IPR001845 HTH ArsR-type DNA-binding domain RU84_15520 IPR018334 ArsR-type transcription regulator, HTH motif RU84_15520 IPR036388 RU84_15520 RU84_15520 IPR036390 RU84_15520 RU84_15525 IPR006659 Arsenate reductase RU84_15525 IPR006660 Arsenate reductase-like RU84_15525 IPR036249 RU84_15525 RU84_15530 IPR000551 MerR-type HTH domain RU84_15530 IPR009061 DNA binding domain, putative RU84_15530 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator RU84_15535 IPR002524 Cation efflux protein RU84_15535 IPR006121 Heavy metal-associated domain, HMA RU84_15535 IPR027469 Cation efflux protein transmembrane domain RU84_15535 IPR036163 RU84_15535 RU84_15540 IPR007167 Ferrous iron transporter FeoA domain RU84_15540 IPR008988 Transcriptional repressor, C-terminal RU84_15540 IPR038157 RU84_15540 RU84_15545 IPR006073 GTP binding domain RU84_15545 IPR011640 Ferrous iron transport protein B, C-terminal RU84_15545 IPR011642 Nucleoside recognition Gate RU84_15545 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_15545 IPR030389 RU84_15545 RU84_15550 IPR021647 Copper binding periplasmic protein CusF RU84_15555 IPR001036 Acriflavin resistance protein RU84_15555 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA RU84_15555 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RU84_15560 IPR006143 RND efflux pump, membrane fusion protein RU84_15560 IPR021647 Copper binding periplasmic protein CusF RU84_15560 IPR032317 RU84_15560 RU84_15565 IPR003423 Outer membrane efflux protein RU84_15575 IPR007939 Copper resistance B precursor RU84_15575 IPR036709 RU84_15575 RU84_15580 IPR001117 Multicopper oxidase, type 1 RU84_15580 IPR002355 Multicopper oxidase, copper-binding site RU84_15580 IPR006376 Copper-resistance protein CopA RU84_15580 IPR008972 Cupredoxin RU84_15580 IPR011706 Multicopper oxidase, type 2 RU84_15580 IPR011707 Multicopper oxidase, type 3 RU84_15580 IPR033138 RU84_15580 RU84_15590 IPR001789 Signal transduction response regulator, receiver domain RU84_15590 IPR001867 Signal transduction response regulator, C-terminal RU84_15590 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response RU84_15590 IPR011006 CheY-like superfamily RU84_15590 IPR016032 Signal transduction response regulator, C-terminal effector RU84_15590 IPR036388 RU84_15590 RU84_15595 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_15595 IPR003660 HAMP linker domain RU84_15595 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RU84_15595 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RU84_15595 IPR006290 Heavy metal sensor kinase RU84_15595 IPR036097 RU84_15595 RU84_15595 IPR036890 RU84_15595 RU84_15600 IPR001757 Cation-transporting P-type ATPase RU84_15600 IPR007029 YHS domain RU84_15600 IPR008250 P-type ATPase, A domain RU84_15600 IPR011017 TRASH domain RU84_15600 IPR018303 P-type ATPase, phosphorylation site RU84_15600 IPR023214 HAD-like domain RU84_15600 IPR023298 P-type ATPase, transmembrane domain RU84_15600 IPR023299 P-type ATPase, cytoplasmic domain N RU84_15600 IPR027256 Cation-transporting P-type ATPase, subfamily IB RU84_15600 IPR036412 RU84_15600 RU84_15605 IPR007348 CopC domain RU84_15605 IPR014756 Immunoglobulin E-set RU84_15610 IPR008457 Copper resistance D RU84_15615 IPR017686 Phage/plasmid-like protein RU84_15615 IPR026325 Protein of unknown function DUF932 RU84_15630 IPR001623 DnaJ domain RU84_15630 IPR036869 RU84_15630 RU84_15660 IPR020518 Transcription regulator PrtN RU84_15665 IPR002104 Integrase, catalytic RU84_15665 IPR011010 DNA breaking-rejoining enzyme, catalytic core RU84_15665 IPR013762 Integrase-like, catalytic core RU84_15670 IPR001269 tRNA-dihydrouridine synthase RU84_15670 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN RU84_15670 IPR013785 Aldolase-type TIM barrel RU84_15670 IPR018517 tRNA-dihydrouridine synthase, conserved site RU84_15685 IPR001584 Integrase, catalytic core RU84_15685 IPR012337 Ribonuclease H-like domain RU84_15685 IPR025246 Transposase IS30-like HTH domain RU84_15685 IPR036397 RU84_15685 RU84_15690 IPR000594 UBA/THIF-type NAD/FAD binding fold RU84_15690 IPR035985 RU84_15690 RU84_15695 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RU84_15695 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RU84_15695 IPR006249 Aconitate/iron regulatory protein 2 RU84_15695 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RU84_15695 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RU84_15695 IPR018136 Aconitase family, 4Fe-4S cluster binding site RU84_15695 IPR036008 RU84_15695 RU84_15700 IPR001130 TatD family RU84_15700 IPR018228 Deoxyribonuclease, TatD-related, conserved site RU84_15700 IPR032466 RU84_15700 RU84_15705 IPR021729 Domain of unknown function DUF3298 RU84_15705 IPR037126 RU84_15705 RU84_15715 IPR000795 Elongation factor, GTP-binding domain RU84_15715 IPR004548 Peptide chain release factor 3 RU84_15715 IPR005225 Small GTP-binding protein domain RU84_15715 IPR009000 Translation protein, beta-barrel domain RU84_15715 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_15715 IPR031157 RU84_15715 RU84_15715 IPR032090 RU84_15715 RU84_15715 IPR035647 RU84_15715 RU84_15715 IPR038467 RU84_15715 RU84_15720 IPR016084 Haem oxygenase-like, multi-helical RU84_15725 IPR001647 DNA-binding HTH domain, TetR-type RU84_15725 IPR009057 Homeodomain-like RU84_15725 IPR036271 RU84_15725 RU84_15730 IPR001647 DNA-binding HTH domain, TetR-type RU84_15730 IPR009057 Homeodomain-like RU84_15735 IPR000160 GGDEF domain RU84_15735 IPR001633 EAL domain RU84_15735 IPR029787 Nucleotide cyclase RU84_15735 IPR035919 RU84_15735 RU84_15740 IPR000506 Acetohydroxy acid isomeroreductase C-terminal RU84_15740 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RU84_15740 IPR013023 Acetohydroxy acid isomeroreductase RU84_15740 IPR013116 Acetohydroxy acid isomeroreductase, catalytic RU84_15740 IPR014359 Ketol-acid reductoisomerase, gammaproteobacteria RU84_15740 IPR036291 RU84_15740 RU84_15745 IPR004789 Acetolactate synthase, small subunit RU84_15745 IPR019455 Acetolactate synthase, small subunit, C-terminal RU84_15745 IPR027271 RU84_15745 RU84_15750 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RU84_15750 IPR012000 Thiamine pyrophosphate enzyme, central domain RU84_15750 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RU84_15750 IPR012846 Acetolactate synthase, large subunit, biosynthetic RU84_15750 IPR029035 DHS-like NAD/FAD-binding domain RU84_15750 IPR029061 Thiamin diphosphate-binding fold RU84_15755 IPR025392 Domain of unknown function DUF4124 RU84_15760 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RU84_15760 IPR002300 Aminoacyl-tRNA synthetase, class Ia RU84_15760 IPR002302 Leucine-tRNA ligase RU84_15760 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RU84_15760 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RU84_15760 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RU84_15760 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_15760 IPR015413 Methionyl/Leucyl tRNA synthetase RU84_15760 IPR025709 Leucyl-tRNA synthetase, editing domain RU84_15765 IPR007485 Lipopolysaccharide assembly, LptE RU84_15770 IPR005790 DNA polymerase III, delta subunit RU84_15770 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RU84_15770 IPR010372 DNA polymerase III, delta RU84_15770 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_15775 IPR006143 RND efflux pump, membrane fusion protein RU84_15775 IPR032317 RU84_15775 RU84_15780 IPR003439 ABC transporter-like RU84_15780 IPR003593 AAA+ ATPase domain RU84_15780 IPR003838 Permease FtsX-like RU84_15780 IPR017871 ABC transporter, conserved site RU84_15780 IPR025857 MacB-like periplasmic core domain RU84_15780 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_15785 IPR003423 Outer membrane efflux protein RU84_15785 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RU84_15790 IPR002347 Glucose/ribitol dehydrogenase RU84_15790 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) RU84_15790 IPR036291 RU84_15790 RU84_15795 IPR010539 Bax inhibitor-1 RU84_15800 IPR012337 Ribonuclease H-like domain RU84_15800 IPR013520 Exonuclease, RNase T/DNA polymerase III RU84_15800 IPR022894 Oligoribonuclease RU84_15800 IPR036397 RU84_15800 RU84_15805 IPR004881 Ribosome biogenesis GTPase RsgA, putative RU84_15805 IPR010914 EngC GTPase RU84_15805 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_15810 IPR001763 Rhodanese-like domain RU84_15810 IPR036873 RU84_15810 RU84_15815 IPR002109 Glutaredoxin RU84_15815 IPR011767 Glutaredoxin active site RU84_15815 IPR011900 Glutaredoxin, GrxC RU84_15815 IPR014025 Glutaredoxin subgroup RU84_15815 IPR036249 RU84_15815 RU84_15820 IPR003708 Bacterial protein export chaperone SecB RU84_15820 IPR035958 RU84_15820 RU84_15825 IPR008278 4'-phosphopantetheinyl transferase superfamily RU84_15825 IPR037143 RU84_15825 RU84_15830 IPR005225 Small GTP-binding protein domain RU84_15830 IPR006073 GTP binding domain RU84_15830 IPR015946 K homology domain-like, alpha/beta RU84_15830 IPR016484 GTP-binding protein EngA RU84_15830 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_15830 IPR032859 RU84_15830 RU84_15835 IPR002372 Pyrrolo-quinoline quinone repeat RU84_15835 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily RU84_15835 IPR015943 WD40/YVTN repeat-like-containing domain RU84_15835 IPR017687 Outer membrane protein assembly factor BamB RU84_15835 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RU84_15840 IPR011990 Tetratricopeptide-like helical domain RU84_15840 IPR018704 Domain of unknown function DUF09976 RU84_15840 IPR026039 Uncharacterised protein family UPF0070 RU84_15845 IPR004154 Anticodon-binding RU84_15845 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit RU84_15845 IPR015807 Histidine-tRNA ligase RU84_15845 IPR036621 RU84_15845 RU84_15850 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type RU84_15850 IPR011005 Dihydropteroate synthase-like RU84_15850 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial RU84_15855 IPR025194 Domain of unknown function DUF4115 RU84_15860 IPR011990 Tetratricopeptide-like helical domain RU84_15860 IPR013360 Pilus biogenesis/stability type IV, PilW RU84_15860 IPR019734 Tetratricopeptide repeat RU84_15865 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr RU84_15865 IPR007197 Radical SAM RU84_15865 IPR013785 Aldolase-type TIM barrel RU84_15865 IPR027492 Dual-specificity RNA methyltransferase RlmN RU84_15870 IPR001564 Nucleoside diphosphate kinase RU84_15870 IPR023005 Nucleoside diphosphate kinase, active site RU84_15870 IPR034907 RU84_15870 RU84_15870 IPR036850 RU84_15870 RU84_15875 IPR007479 ISC system FeS cluster assembly, IscX RU84_15875 IPR036762 RU84_15875 RU84_15880 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RU84_15880 IPR036938 RU84_15880 RU84_15885 IPR001296 Glycosyl transferase, family 1 RU84_15885 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RU84_15890 IPR001478 PDZ domain RU84_15890 IPR004447 C-terminal-processing peptidase S41A RU84_15890 IPR005151 Tail specific protease RU84_15890 IPR020992 Tail specific protease, C-terminal RU84_15890 IPR029045 ClpP/crotonase-like domain RU84_15890 IPR036034 RU84_15890 RU84_15895 IPR001764 Glycoside hydrolase, family 3, N-terminal RU84_15895 IPR017853 Glycoside hydrolase, superfamily RU84_15895 IPR019800 Glycoside hydrolase, family 3, active site RU84_15895 IPR022956 Beta-hexosaminidase, bacterial RU84_15895 IPR036962 RU84_15895 RU84_15900 IPR007213 Leucine carboxyl methyltransferase RU84_15900 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_15905 IPR000073 Alpha/beta hydrolase fold-1 RU84_15905 IPR029058 Alpha/Beta hydrolase fold RU84_15910 IPR000965 Gamma-glutamyl phosphate reductase GPR RU84_15910 IPR012134 Glutamate-5-semialdehyde dehydrogenase RU84_15910 IPR015590 Aldehyde dehydrogenase domain RU84_15910 IPR016161 Aldehyde/histidinol dehydrogenase RU84_15910 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_15910 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_15910 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site RU84_15915 IPR015590 Aldehyde dehydrogenase domain RU84_15915 IPR016160 Aldehyde dehydrogenase, cysteine active site RU84_15915 IPR016161 Aldehyde/histidinol dehydrogenase RU84_15915 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_15915 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_15920 IPR006001 Carbohydrate kinase, thermoresistant glucokinase RU84_15920 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_15920 IPR031322 RU84_15920 RU84_15925 IPR003474 Gluconate transporter RU84_15930 IPR000887 KDPG/KHG aldolase RU84_15930 IPR013785 Aldolase-type TIM barrel RU84_15930 IPR031337 RU84_15930 RU84_15930 IPR031338 RU84_15930 RU84_15935 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RU84_15935 IPR004786 6-phosphogluconate dehydratase RU84_15935 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RU84_15935 IPR037237 RU84_15935 RU84_15940 IPR000890 Aliphatic acid kinase, short-chain RU84_15940 IPR004372 Acetate/Proprionate kinase RU84_15940 IPR023865 Aliphatic acid kinase, short-chain, conserved site RU84_15945 IPR002505 Phosphate acetyl/butaryl transferase RU84_15945 IPR004614 Phosphate acetyltransferase RU84_15945 IPR010766 DRTGG RU84_15945 IPR016475 Phosphate acetyltransferase, bacteria RU84_15945 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_15945 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like RU84_15950 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain RU84_15950 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain RU84_15950 IPR011167 Iron-dependent fumarate hydratase RU84_15950 IPR036660 RU84_15950 RU84_15955 IPR018637 Domain of unknown function DUF2059 RU84_15960 IPR022548 Domain of unknown function DUF2846 RU84_15965 IPR003593 AAA+ ATPase domain RU84_15965 IPR003959 ATPase, AAA-type, core RU84_15965 IPR004487 Clp protease, ATP-binding subunit ClpX RU84_15965 IPR010603 Zinc finger, ClpX C4-type RU84_15965 IPR019489 Clp ATPase, C-terminal RU84_15965 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_15965 IPR038366 RU84_15965 RU84_15970 IPR001907 ATP-dependent Clp protease proteolytic subunit RU84_15970 IPR018215 ClpP, active site RU84_15970 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RU84_15970 IPR029045 ClpP/crotonase-like domain RU84_15970 IPR033135 RU84_15970 RU84_15975 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RU84_15975 IPR005215 Trigger factor RU84_15975 IPR008880 Trigger factor, C-terminal domain RU84_15975 IPR008881 Trigger factor, ribosome-binding, bacterial RU84_15975 IPR027304 Trigger factor/SurA domain RU84_15975 IPR036611 RU84_15975 RU84_15975 IPR037041 RU84_15975 RU84_15980 IPR000531 TonB-dependent receptor, beta-barrel RU84_15980 IPR010105 TonB-dependent siderophore receptor RU84_15980 IPR012910 TonB-dependent receptor, plug RU84_15980 IPR036942 RU84_15980 RU84_15980 IPR037066 RU84_15980 RU84_15985 IPR005123 Oxoglutarate/iron-dependent dioxygenase RU84_15985 IPR006620 Prolyl 4-hydroxylase, alpha subunit RU84_15985 IPR023550 PKHD-type hydroxylase RU84_15990 IPR000891 Pyruvate carboxyltransferase RU84_15990 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site RU84_15990 IPR005668 2-isopropylmalate synthase RU84_15990 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain RU84_15990 IPR013785 Aldolase-type TIM barrel RU84_15990 IPR036230 RU84_15990 RU84_15995 IPR000073 Alpha/beta hydrolase fold-1 RU84_15995 IPR008220 Homoserine acetyltransferase RU84_15995 IPR029058 Alpha/Beta hydrolase fold RU84_16000 IPR010743 Methionine biosynthesis MetW RU84_16000 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_16005 IPR006597 Sel1-like RU84_16005 IPR011990 Tetratricopeptide-like helical domain RU84_16010 IPR002637 Ham1-like protein RU84_16010 IPR020922 Non-canonical purine NTP pyrophosphatase RU84_16010 IPR029001 Inosine triphosphate pyrophosphatase-like RU84_16020 IPR003369 Sec-independent protein translocase protein TatA/B/E RU84_16020 IPR006312 Sec-independent protein translocase protein TatA/E RU84_16025 IPR003369 Sec-independent protein translocase protein TatA/B/E RU84_16025 IPR018448 Twin-arginine translocation protein TatB RU84_16030 IPR002033 Sec-independent periplasmic protein translocase TatC RU84_16035 IPR008557 Protein of unknown function DUF839 RU84_16040 IPR008557 Protein of unknown function DUF839 RU84_16045 IPR008551 Protein of unknown function DUF833 RU84_16050 IPR001640 Prolipoprotein diacylglyceryl transferase RU84_16065 IPR000398 Thymidylate synthase RU84_16065 IPR020940 Thymidylate synthase, active site RU84_16065 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain RU84_16065 IPR036926 RU84_16065 RU84_16070 IPR001796 Dihydrofolate reductase domain RU84_16070 IPR012259 Dihydrofolate reductase RU84_16070 IPR017925 Dihydrofolate reductase conserved site RU84_16070 IPR024072 Dihydrofolate reductase-like domain RU84_16075 IPR025178 Domain of unknown function DUF4105 RU84_16080 IPR002569 Peptide methionine sulphoxide reductase MsrA RU84_16080 IPR036509 RU84_16080 RU84_16085 IPR003400 Biopolymer transport protein ExbD/TolR RU84_16090 IPR002898 MotA/TolQ/ExbB proton channel RU84_16095 IPR006260 TonB, C-terminal RU84_16095 IPR037682 RU84_16095 RU84_16100 IPR002376 Formyl transferase, N-terminal RU84_16100 IPR002912 ACT domain RU84_16100 IPR004810 Formyltetrahydrofolate deformylase RU84_16100 IPR036477 RU84_16100 RU84_16105 IPR001647 DNA-binding HTH domain, TetR-type RU84_16105 IPR009057 Homeodomain-like RU84_16105 IPR025722 Bacterial transcriptional repressor TetR RU84_16110 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent RU84_16110 IPR015590 Aldehyde dehydrogenase domain RU84_16110 IPR016160 Aldehyde dehydrogenase, cysteine active site RU84_16110 IPR016161 Aldehyde/histidinol dehydrogenase RU84_16110 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_16110 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_16110 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RU84_16115 IPR001383 Ribosomal protein L28 RU84_16115 IPR026569 Ribosomal protein L28/L24 RU84_16115 IPR034704 RU84_16115 RU84_16115 IPR037147 RU84_16115 RU84_16120 IPR001705 Ribosomal protein L33 RU84_16120 IPR011332 Zinc-binding ribosomal protein RU84_16120 IPR018264 Ribosomal protein L33, conserved site RU84_16120 IPR038584 RU84_16120 RU84_16125 IPR003148 Regulator of K+ conductance, N-terminal RU84_16125 IPR006153 Cation/H+ exchanger RU84_16125 IPR036291 RU84_16125 RU84_16125 IPR038770 RU84_16125 RU84_16140 IPR007374 ASCH domain RU84_16140 IPR015947 PUA-like domain RU84_16145 IPR000504 RNA recognition motif domain RU84_16145 IPR012677 Nucleotide-binding, alpha-beta plait RU84_16145 IPR035979 RU84_16145 RU84_16150 IPR013986 DExx box DNA helicase domain RU84_16150 IPR014017 DNA helicase, UvrD-like, C-terminal RU84_16150 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_16150 IPR034739 RU84_16150 RU84_16155 IPR005325 Protein of unknown function DUF308, membrane RU84_16165 IPR003601 DNA topoisomerase, type IA, domain 2 RU84_16165 IPR003602 DNA topoisomerase, type IA, DNA-binding domain RU84_16165 IPR005733 DNA topoisomerase I, bacterial-type RU84_16165 IPR006171 Toprim domain RU84_16165 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type RU84_16165 IPR013497 DNA topoisomerase, type IA, central RU84_16165 IPR013498 DNA topoisomerase, type IA, zn finger RU84_16165 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RU84_16165 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RU84_16165 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 RU84_16165 IPR023405 DNA topoisomerase, type IA, core domain RU84_16165 IPR023406 DNA topoisomerase, type IA, active site RU84_16165 IPR028612 DNA topoisomerase I, type IA RU84_16175 IPR002577 Helix-turn-helix, HxlR type RU84_16175 IPR036388 RU84_16175 RU84_16175 IPR036390 RU84_16175 RU84_16180 IPR011032 GroES (chaperonin 10)-like RU84_16180 IPR013154 Alcohol dehydrogenase GroES-like RU84_16180 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 RU84_16180 IPR020843 Polyketide synthase, enoylreductase RU84_16180 IPR036291 RU84_16180 RU84_16185 IPR007236 SlyX RU84_16190 IPR003439 ABC transporter-like RU84_16190 IPR003593 AAA+ ATPase domain RU84_16190 IPR017871 ABC transporter, conserved site RU84_16190 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_16190 IPR032524 RU84_16190 RU84_16190 IPR032781 RU84_16190 RU84_16190 IPR037118 RU84_16190 RU84_16195 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RU84_16200 IPR004960 Bacterial lipid A biosynthesis acyltransferase RU84_16200 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase RU84_16205 IPR001296 Glycosyl transferase, family 1 RU84_16205 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RU84_16210 IPR001991 Sodium:dicarboxylate symporter RU84_16210 IPR018107 Sodium:dicarboxylate symporter, conserved site RU84_16210 IPR034703 RU84_16210 RU84_16210 IPR036458 RU84_16210 RU84_16215 IPR005135 Endonuclease/exonuclease/phosphatase RU84_16215 IPR036691 RU84_16215 RU84_16220 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site RU84_16220 IPR000534 Semialdehyde dehydrogenase, NAD-binding RU84_16220 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type RU84_16220 IPR012080 Aspartate-semialdehyde dehydrogenase RU84_16220 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RU84_16220 IPR036291 RU84_16220 RU84_16230 IPR038440 RU84_16230 RU84_16235 IPR006034 Asparaginase/glutaminase RU84_16235 IPR027473 L-asparaginase, C-terminal domain RU84_16235 IPR027474 L-asparaginase, N-terminal RU84_16235 IPR036152 RU84_16235 RU84_16235 IPR037152 RU84_16235 RU84_16240 IPR001406 Pseudouridine synthase I, TruA RU84_16240 IPR020095 Pseudouridine synthase I, TruA, C-terminal RU84_16240 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain RU84_16240 IPR020103 Pseudouridine synthase, catalytic domain RU84_16245 IPR009057 Homeodomain-like RU84_16245 IPR018060 DNA binding HTH domain, AraC-type RU84_16245 IPR032687 RU84_16245 RU84_16250 IPR004368 Translation initiation factor IF-1 RU84_16250 IPR006196 RNA-binding domain, S1, IF1 type RU84_16250 IPR012340 Nucleic acid-binding, OB-fold RU84_16250 IPR022967 RNA-binding domain, S1 RU84_16255 IPR009739 Protein of unknown function DUF1311 RU84_16265 IPR004429 Isopropylmalate dehydrogenase RU84_16265 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RU84_16265 IPR024084 Isopropylmalate dehydrogenase-like domain RU84_16275 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RU84_16275 IPR004431 3-isopropylmalate dehydratase, small subunit RU84_16275 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RU84_16280 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RU84_16280 IPR004430 3-isopropylmalate dehydratase, large subunit RU84_16280 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RU84_16280 IPR018136 Aconitase family, 4Fe-4S cluster binding site RU84_16280 IPR036008 RU84_16280 RU84_16285 IPR018638 Domain of unknown function DUF2061, membrane RU84_16290 IPR000847 Transcription regulator HTH, LysR RU84_16290 IPR005119 LysR, substrate-binding RU84_16290 IPR036388 RU84_16290 RU84_16290 IPR036390 RU84_16290 RU84_16295 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial RU84_16295 IPR023214 HAD-like domain RU84_16295 IPR036412 RU84_16295 RU84_16300 IPR000086 NUDIX hydrolase domain RU84_16300 IPR015797 NUDIX hydrolase domain-like RU84_16300 IPR020084 NUDIX hydrolase, conserved site RU84_16300 IPR020476 NUDIX hydrolase RU84_16300 IPR022927 RNA pyrophosphohydrolase RppH RU84_16305 IPR000121 PEP-utilising enzyme, C-terminal RU84_16305 IPR003018 GAF domain RU84_16305 IPR006318 Phosphoenolpyruvate-utilising enzyme RU84_16305 IPR008279 PEP-utilising enzyme, mobile domain RU84_16305 IPR008731 Phosphotransferase system, enzyme I N-terminal RU84_16305 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RU84_16305 IPR023151 PEP-utilising enzyme, conserved site RU84_16305 IPR029016 GAF domain-like RU84_16305 IPR036618 RU84_16305 RU84_16305 IPR036637 RU84_16305 RU84_16310 IPR000763 Catalase-peroxidase haem RU84_16310 IPR002016 Haem peroxidase, plant/fungal/bacterial RU84_16310 IPR010255 Haem peroxidase RU84_16310 IPR019794 Peroxidase, active site RU84_16315 IPR001279 Beta-lactamase-like RU84_16315 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D RU84_16315 IPR036866 RU84_16315 RU84_16320 IPR000847 Transcription regulator HTH, LysR RU84_16320 IPR005119 LysR, substrate-binding RU84_16320 IPR036388 RU84_16320 RU84_16320 IPR036390 RU84_16320 RU84_16325 IPR009781 Protein of unknown function DUF1345 RU84_16330 IPR004045 Glutathione S-transferase, N-terminal RU84_16330 IPR004046 Glutathione S-transferase, C-terminal RU84_16330 IPR036249 RU84_16330 RU84_16330 IPR036282 RU84_16330 RU84_16335 IPR013196 Helix-turn-helix, type 11 RU84_16335 IPR026881 WYL domain RU84_16335 IPR036388 RU84_16335 RU84_16335 IPR036390 RU84_16335 RU84_16340 IPR006439 HAD hydrolase, subfamily IA RU84_16340 IPR023198 Phosphoglycolate phosphatase, domain 2 RU84_16340 IPR023214 HAD-like domain RU84_16340 IPR036412 RU84_16340 RU84_16345 IPR002942 RNA-binding S4 domain RU84_16345 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RU84_16345 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RU84_16345 IPR006225 Pseudouridine synthase, RluC/RluD RU84_16345 IPR020103 Pseudouridine synthase, catalytic domain RU84_16345 IPR036986 RU84_16345 RU84_16350 IPR003029 Ribosomal protein S1, RNA-binding domain RU84_16350 IPR004659 Ribonuclease E/G RU84_16350 IPR012340 Nucleic acid-binding, OB-fold RU84_16350 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RU84_16350 IPR022967 RNA-binding domain, S1 RU84_16350 IPR028878 Ribonuclease E RU84_16355 IPR000873 AMP-dependent synthetase/ligase RU84_16355 IPR020845 AMP-binding, conserved site RU84_16355 IPR025110 AMP-binding enzyme C-terminal domain RU84_16370 IPR000847 Transcription regulator HTH, LysR RU84_16370 IPR005119 LysR, substrate-binding RU84_16370 IPR036388 RU84_16370 RU84_16370 IPR036390 RU84_16370 RU84_16375 IPR002347 Glucose/ribitol dehydrogenase RU84_16375 IPR036291 RU84_16375 RU84_16380 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related RU84_16380 IPR006638 Elongator protein 3/MiaB/NifB RU84_16380 IPR007197 Radical SAM RU84_16380 IPR010723 HemN, C-terminal domain RU84_16380 IPR023404 Radical SAM, alpha/beta horseshoe RU84_16385 IPR006750 Protein of unknown function DUF606 RU84_16390 IPR002528 Multi antimicrobial extrusion protein RU84_16395 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_16395 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RU84_16395 IPR036250 RU84_16395 RU84_16395 IPR037069 RU84_16395 RU84_16400 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_16400 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_16400 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RU84_16400 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_16400 IPR023922 Sulphate-starvation-induced SfnB RU84_16400 IPR036250 RU84_16400 RU84_16400 IPR037069 RU84_16400 RU84_16405 IPR004147 UbiB domain RU84_16405 IPR011009 Protein kinase-like domain RU84_16410 IPR002150 Ribosomal protein L31 RU84_16410 IPR027493 Ribosomal protein L31 type B RU84_16410 IPR034704 RU84_16410 RU84_16425 IPR003491 Replication initiation factor RU84_16450 IPR019670 Protein of unkown function DUF2523 RU84_16455 IPR008900 Zona occludens toxin RU84_16460 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RU84_16460 IPR003346 Transposase, IS116/IS110/IS902 RU84_16465 IPR014984 HopJ type III effector protein RU84_16465 IPR038604 RU84_16465 RU84_16470 IPR003691 Putative fluoride ion transporter CrcB RU84_16475 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RU84_16475 IPR011057 Mss4-like RU84_16480 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like RU84_16480 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 RU84_16480 IPR023166 HI0933 insert-like domain RU84_16480 IPR036188 RU84_16480 RU84_16485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_16490 IPR005584 DNA gyrase inhibitor YacG RU84_16490 IPR013088 Zinc finger, NHR/GATA-type RU84_16495 IPR001279 Beta-lactamase-like RU84_16495 IPR036866 RU84_16495 RU84_16500 IPR001015 Ferrochelatase RU84_16500 IPR019772 Ferrochelatase, active site RU84_16505 IPR025139 Domain of unknown function DUF4062 RU84_16510 IPR001920 Asp/Glu racemase RU84_16510 IPR004391 Glutamate racemase RU84_16510 IPR015942 Asp/Glu/hydantoin racemase RU84_16510 IPR018187 Asp/Glu racemase, active site RU84_16510 IPR033134 RU84_16510 RU84_16515 IPR010707 Protein of unknown function DUF1285 RU84_16515 IPR023361 Protein of unknown function DUF1285, beta-roll domain RU84_16520 IPR036188 RU84_16520 RU84_16530 IPR001455 TusA-like domain RU84_16530 IPR036868 RU84_16530 RU84_16535 IPR000644 CBS domain RU84_16535 IPR005170 Transporter-associated domain RU84_16535 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RU84_16535 IPR036318 RU84_16535 RU84_16540 IPR003010 Carbon-nitrogen hydrolase RU84_16540 IPR004563 Apolipoprotein N-acyltransferase RU84_16540 IPR036526 RU84_16540 RU84_16545 IPR002547 tRNA-binding domain RU84_16545 IPR008231 Export-related chaperone protein CsaA RU84_16545 IPR012340 Nucleic acid-binding, OB-fold RU84_16555 IPR000983 Bacterial general secretion pathway protein G-type pilin RU84_16555 IPR010054 General secretion pathway protein G RU84_16555 IPR012902 Prokaryotic N-terminal methylation site RU84_16555 IPR013545 Type II secretion system protein G RU84_16560 IPR001992 Type II secretion system conserved site RU84_16560 IPR003004 GspF/PilC family RU84_16560 IPR011850 General secretion pathway protein F RU84_16560 IPR018076 Type II secretion system F domain RU84_16565 IPR001650 Helicase, C-terminal RU84_16565 IPR005259 Primosomal protein n RU84_16565 IPR006935 Helicase/UvrB domain RU84_16565 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RU84_16565 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_16570 IPR003148 Regulator of K+ conductance, N-terminal RU84_16570 IPR004771 K+/H+ exchanger RU84_16570 IPR006153 Cation/H+ exchanger RU84_16570 IPR036291 RU84_16570 RU84_16570 IPR038770 RU84_16570 RU84_16575 IPR000397 Heat shock protein Hsp33 RU84_16575 IPR016153 Heat shock protein Hsp33, N-terminal RU84_16575 IPR016154 Heat shock protein Hsp33, C-terminal RU84_16575 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain RU84_16580 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RU84_16585 IPR001623 DnaJ domain RU84_16585 IPR002939 Chaperone DnaJ, C-terminal RU84_16585 IPR008971 HSP40/DnaJ peptide-binding RU84_16585 IPR036869 RU84_16585 RU84_16595 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB RU84_16600 IPR001247 Exoribonuclease, phosphorolytic domain 1 RU84_16600 IPR003029 Ribosomal protein S1, RNA-binding domain RU84_16600 IPR004087 K Homology domain RU84_16600 IPR004088 K Homology domain, type 1 RU84_16600 IPR012162 Polyribonucleotide nucleotidyltransferase RU84_16600 IPR012340 Nucleic acid-binding, OB-fold RU84_16600 IPR015847 Exoribonuclease, phosphorolytic domain 2 RU84_16600 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain RU84_16600 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_16600 IPR022967 RNA-binding domain, S1 RU84_16600 IPR027408 PNPase/RNase PH domain RU84_16600 IPR036345 RU84_16600 RU84_16600 IPR036456 RU84_16600 RU84_16600 IPR036612 RU84_16600 RU84_16605 IPR000589 Ribosomal protein S15 RU84_16605 IPR005290 Ribosomal protein S15, bacterial-type RU84_16605 IPR009068 S15/NS1, RNA-binding RU84_16610 IPR001466 Beta-lactamase-related RU84_16610 IPR012338 Beta-lactamase/transpeptidase-like RU84_16615 IPR003593 AAA+ ATPase domain RU84_16615 IPR006344 Exodeoxyribonuclease V, alpha subunit RU84_16615 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_16615 IPR027785 UvrD-like helicase C-terminal domain RU84_16620 IPR004586 Exodeoxyribonuclease V, beta subunit RU84_16620 IPR011335 Restriction endonuclease type II-like RU84_16620 IPR011604 Exonuclease, phage-type/RecB, C-terminal RU84_16620 IPR014017 DNA helicase, UvrD-like, C-terminal RU84_16620 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_16620 IPR034739 RU84_16620 RU84_16620 IPR038726 RU84_16620 RU84_16625 IPR006697 Exodeoxyribonuclease V, gamma subunit RU84_16625 IPR011335 Restriction endonuclease type II-like RU84_16625 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_16635 IPR022488 Polyphosphate kinase-2-related RU84_16635 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_16645 IPR004033 UbiE/COQ5 methyltransferase RU84_16645 IPR023576 UbiE/COQ5 methyltransferase, conserved site RU84_16645 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_16655 IPR004147 UbiB domain RU84_16655 IPR011009 Protein kinase-like domain RU84_16660 IPR002938 Monooxygenase, FAD-binding RU84_16660 IPR036188 RU84_16660 RU84_16665 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RU84_16665 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RU84_16670 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain RU84_16670 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase RU84_16670 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like RU84_16670 IPR023019 Histidine biosynthesis bifunctional protein HisIE RU84_16670 IPR026660 Phosphoribosyl-AMP cyclohydrolase RU84_16670 IPR038019 RU84_16670 RU84_16675 IPR014017 DNA helicase, UvrD-like, C-terminal RU84_16675 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_16680 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_16680 IPR038729 RU84_16680 RU84_16685 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal RU84_16685 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RU84_16685 IPR007182 Na+/H+ antiporter MnhB subunit-related protein RU84_16685 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup RU84_16685 IPR025383 Domain of unknown function DUF4040 RU84_16690 IPR039428 RU84_16690 RU84_16695 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RU84_16695 IPR003918 NADH:ubiquinone oxidoreductase RU84_16700 IPR002758 Na+/H+ antiporter subunit E RU84_16705 IPR007208 Na(+)/H(+) antiporter subunit F-like RU84_16710 IPR005133 Na+/H+ antiporter subunit G RU84_16715 IPR000238 Ribosome-binding factor A RU84_16715 IPR015946 K homology domain-like, alpha/beta RU84_16715 IPR023799 Ribosome-binding factor A domain RU84_16720 IPR000178 Translation initiation factor aIF-2, bacterial-like RU84_16720 IPR000795 Elongation factor, GTP-binding domain RU84_16720 IPR005225 Small GTP-binding protein domain RU84_16720 IPR006847 Translation initiation factor IF-2, N-terminal RU84_16720 IPR009000 Translation protein, beta-barrel domain RU84_16720 IPR009061 DNA binding domain, putative RU84_16720 IPR013575 Initiation factor 2 associated domain, bacterial RU84_16720 IPR023115 Translation initiation factor IF- 2, domain 3 RU84_16720 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_16720 IPR036925 RU84_16720 RU84_16725 IPR009019 K homology domain, prokaryotic type RU84_16725 IPR010213 Transcription termination factor NusA RU84_16725 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical RU84_16725 IPR012340 Nucleic acid-binding, OB-fold RU84_16725 IPR013735 Transcription factor NusA, N-terminal RU84_16725 IPR015946 K homology domain-like, alpha/beta RU84_16725 IPR022967 RNA-binding domain, S1 RU84_16725 IPR025249 KH domain, NusA-like RU84_16725 IPR030842 RU84_16725 RU84_16725 IPR036555 RU84_16725 RU84_16730 IPR003728 Ribosome maturation factor RimP RU84_16730 IPR028989 Ribosome maturation factor RimP, N-terminal RU84_16730 IPR028998 Ribosome maturation factor RimP, C-terminal RU84_16730 IPR035956 RU84_16730 RU84_16730 IPR036847 RU84_16730 RU84_16750 IPR004692 Preprotein translocase SecG subunit RU84_16755 IPR000652 Triosephosphate isomerase RU84_16755 IPR013785 Aldolase-type TIM barrel RU84_16755 IPR020861 Triosephosphate isomerase, active site RU84_16755 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic RU84_16755 IPR035990 RU84_16755 RU84_16760 IPR001482 Type II secretion system protein E RU84_16760 IPR007831 General secretory system II, protein E, N-terminal RU84_16760 IPR013374 ATPase, type IV, pilus assembly, PilB RU84_16760 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_16760 IPR037257 RU84_16760 RU84_16765 IPR001992 Type II secretion system conserved site RU84_16765 IPR003004 GspF/PilC family RU84_16765 IPR018076 Type II secretion system F domain RU84_16770 IPR000045 Prepilin type IV endopeptidase, peptidase domain RU84_16770 IPR010627 Peptidase A24A, N-terminal RU84_16770 IPR014032 Peptidase A24A, prepilin type IV, bacterial RU84_16775 IPR001977 Dephospho-CoA kinase RU84_16775 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_16780 IPR000620 Drug/metabolite transporter RU84_16785 IPR001537 tRNA/rRNA methyltransferase, SpoU type RU84_16785 IPR004441 RNA methyltransferase TrmH family RU84_16785 IPR013123 RNA 2-O ribose methyltransferase, substrate binding RU84_16785 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB RU84_16785 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RU84_16785 IPR029028 Alpha/beta knot methyltransferases RU84_16785 IPR029064 50S ribosomal protein L30e-like RU84_16790 IPR009664 Protein of unknown function DUF1255 RU84_16790 IPR011051 RmlC-like cupin domain RU84_16790 IPR014710 RmlC-like jelly roll fold RU84_16795 IPR011990 Tetratricopeptide-like helical domain RU84_16795 IPR019734 Tetratricopeptide repeat RU84_16800 IPR003395 RecF/RecN/SMC, N-terminal RU84_16800 IPR004604 DNA recombination/repair protein RecN RU84_16800 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_16805 IPR003774 Protein of unknown function UPF0301 RU84_16810 IPR005227 Resolvase, holliday junction-type, YqgF-like RU84_16810 IPR006641 YqgF/RNase H-like domain RU84_16810 IPR012337 Ribonuclease H-like domain RU84_16810 IPR037027 RU84_16810 RU84_16815 IPR039562 RU84_16815 RU84_16820 IPR012451 Protein of unknown function DUF1656 RU84_16825 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein RU84_16830 IPR005471 Transcription regulator IclR, N-terminal RU84_16830 IPR014757 Transcription regulator IclR, C-terminal RU84_16830 IPR029016 GAF domain-like RU84_16830 IPR036388 RU84_16830 RU84_16830 IPR036390 RU84_16830 RU84_16835 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like RU84_16835 IPR037151 RU84_16835 RU84_16840 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RU84_16840 IPR009057 Homeodomain-like RU84_16840 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RU84_16840 IPR018060 DNA binding HTH domain, AraC-type RU84_16840 IPR036217 RU84_16840 RU84_16840 IPR036388 RU84_16840 RU84_16840 IPR036631 RU84_16840 RU84_16845 IPR000462 CDP-alcohol phosphatidyltransferase RU84_16845 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase RU84_16850 IPR029069 HotDog domain RU84_16855 IPR000305 GIY-YIG nuclease superfamily RU84_16855 IPR001162 UvrC family homology region RU84_16855 IPR001943 UVR domain RU84_16855 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RU84_16855 IPR004791 UvrABC system, subunit C RU84_16855 IPR010994 RuvA domain 2-like RU84_16855 IPR035901 RU84_16855 RU84_16855 IPR036876 RU84_16855 RU84_16855 IPR038476 RU84_16855 RU84_16865 IPR007803 Arginine/Asparagine/Proline hydroxylase RU84_16865 IPR027443 Isopenicillin N synthase-like RU84_16870 IPR001753 Crotonase superfamily RU84_16870 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RU84_16870 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RU84_16870 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RU84_16870 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RU84_16870 IPR012799 Fatty oxidation complex, alpha subunit FadB RU84_16870 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RU84_16870 IPR029045 ClpP/crotonase-like domain RU84_16870 IPR036291 RU84_16870 RU84_16875 IPR002155 Thiolase RU84_16875 IPR012805 Acetyl-CoA C-acyltransferase FadA RU84_16875 IPR016039 Thiolase-like RU84_16875 IPR020610 Thiolase, active site RU84_16875 IPR020613 Thiolase, conserved site RU84_16875 IPR020615 Thiolase, acyl-enzyme intermediate active site RU84_16875 IPR020616 Thiolase, N-terminal RU84_16875 IPR020617 Thiolase, C-terminal RU84_16885 IPR010662 Putative hydrolase RBBP9/YdeN RU84_16885 IPR029058 Alpha/Beta hydrolase fold RU84_16890 IPR000551 MerR-type HTH domain RU84_16890 IPR009061 DNA binding domain, putative RU84_16900 IPR001853 DSBA-like thioredoxin domain RU84_16900 IPR036249 RU84_16900 RU84_16915 IPR001404 Heat shock protein Hsp90 family RU84_16915 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_16915 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_16915 IPR020575 Heat shock protein Hsp90, N-terminal RU84_16915 IPR036890 RU84_16915 RU84_16915 IPR037196 RU84_16915 RU84_16920 IPR009739 Protein of unknown function DUF1311 RU84_16925 IPR005618 Outer membrane protein, OmpW RU84_16925 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RU84_16930 IPR018461 Na+/H+ antiporter, NhaC-like RU84_16930 IPR032813 RU84_16930 RU84_16935 IPR000073 Alpha/beta hydrolase fold-1 RU84_16935 IPR000639 Epoxide hydrolase-like RU84_16935 IPR029058 Alpha/Beta hydrolase fold RU84_16940 IPR027961 Protein of unknown function DUF4442 RU84_16940 IPR029069 HotDog domain RU84_16945 IPR027367 YMGG-like Gly-zipper RU84_16955 IPR000722 RNA polymerase, alpha subunit RU84_16955 IPR006592 RNA polymerase, N-terminal RU84_16955 IPR007066 RNA polymerase Rpb1, domain 3 RU84_16955 IPR007080 RNA polymerase Rpb1, domain 1 RU84_16955 IPR007081 RNA polymerase Rpb1, domain 5 RU84_16955 IPR007083 RNA polymerase Rpb1, domain 4 RU84_16955 IPR012754 DNA-directed RNA polymerase, subunit beta-prime RU84_16955 IPR038120 RU84_16955 RU84_16960 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 RU84_16960 IPR007121 RNA polymerase, beta subunit, conserved site RU84_16960 IPR007641 RNA polymerase Rpb2, domain 7 RU84_16960 IPR007642 RNA polymerase Rpb2, domain 2 RU84_16960 IPR007644 RNA polymerase, beta subunit, protrusion RU84_16960 IPR007645 RNA polymerase Rpb2, domain 3 RU84_16960 IPR010243 DNA-directed RNA polymerase, beta subunit RU84_16960 IPR014724 RNA polymerase Rpb2, OB-fold RU84_16960 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain RU84_16960 IPR037033 RU84_16960 RU84_16960 IPR037034 RU84_16960 RU84_16965 IPR000206 Ribosomal protein L7/L12 RU84_16965 IPR008932 Ribosomal protein L7/L12, oligomerisation RU84_16965 IPR013823 Ribosomal protein L7/L12, C-terminal RU84_16965 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RU84_16965 IPR036235 RU84_16965 RU84_16970 IPR001790 Ribosomal protein L10/acidic P0 RU84_16970 IPR002363 Ribosomal protein L10, eubacterial, conserved site RU84_16970 IPR022973 Ribosomal protein L10 RU84_16975 IPR002143 Ribosomal protein L1 RU84_16975 IPR005878 Ribosomal protein L1, bacterial-type RU84_16975 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RU84_16975 IPR023673 Ribosomal protein L1, conserved site RU84_16975 IPR023674 Ribosomal protein L1-like RU84_16975 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RU84_16980 IPR000911 Ribosomal protein L11/L12 RU84_16980 IPR006519 Ribosomal protein L11, bacterial-type RU84_16980 IPR020783 Ribosomal protein L11, C-terminal RU84_16980 IPR020784 Ribosomal protein L11, N-terminal RU84_16980 IPR020785 Ribosomal protein L11, conserved site RU84_16980 IPR036769 RU84_16980 RU84_16980 IPR036796 RU84_16980 RU84_16985 IPR001062 Transcription antitermination protein, NusG RU84_16985 IPR005824 KOW RU84_16985 IPR006645 NusG, N-terminal RU84_16985 IPR008991 Translation protein SH3-like domain RU84_16985 IPR014722 Ribosomal protein L2 domain 2 RU84_16985 IPR036735 RU84_16985 RU84_16990 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit RU84_16990 IPR005807 SecE subunit of protein translocation complex RU84_16990 IPR038379 RU84_16990 RU84_17000 IPR000795 Elongation factor, GTP-binding domain RU84_17000 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RU84_17000 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RU84_17000 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RU84_17000 IPR005225 Small GTP-binding protein domain RU84_17000 IPR009000 Translation protein, beta-barrel domain RU84_17000 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RU84_17000 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_17000 IPR031157 RU84_17000 RU84_17025 IPR005256 Anthranilate synthase component I, PabB-like RU84_17025 IPR005801 ADC synthase RU84_17025 IPR006805 Anthranilate synthase component I, N-terminal RU84_17025 IPR015890 Chorismate binding, C-terminal RU84_17025 IPR019999 Anthranilate synthase component I - like RU84_17030 IPR006346 2-phosphoglycolate phosphatase, prokaryotic RU84_17030 IPR006439 HAD hydrolase, subfamily IA RU84_17030 IPR023198 Phosphoglycolate phosphatase, domain 2 RU84_17030 IPR023214 HAD-like domain RU84_17030 IPR036412 RU84_17030 RU84_17035 IPR000253 Forkhead-associated (FHA) domain RU84_17035 IPR008984 SMAD/FHA domain RU84_17040 IPR001775 GspD/PilQ family RU84_17040 IPR004845 Type II secretion system GspD, conserved site RU84_17040 IPR004846 Type II/III secretion system RU84_17040 IPR005644 NolW-like RU84_17040 IPR013356 Type II secretion system GspD RU84_17040 IPR038591 RU84_17040 RU84_17045 IPR001478 PDZ domain RU84_17045 IPR024961 RU84_17045 RU84_17045 IPR036034 RU84_17045 RU84_17050 IPR022792 Type II secretion system, protein N RU84_17055 IPR001801 Histone-like protein H-NS RU84_17055 IPR027444 Histone-like protein H-NS, C-terminal domain RU84_17055 IPR037150 RU84_17055 RU84_17060 IPR029069 HotDog domain RU84_17075 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase RU84_17075 IPR036108 RU84_17075 RU84_17080 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase RU84_17080 IPR022417 Porphobilinogen deaminase, N-terminal RU84_17080 IPR022418 Porphobilinogen deaminase, C-terminal RU84_17080 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site RU84_17080 IPR036803 RU84_17080 RU84_17085 IPR001789 Signal transduction response regulator, receiver domain RU84_17085 IPR007492 LytTR DNA-binding domain RU84_17085 IPR011006 CheY-like superfamily RU84_17090 IPR010559 Signal transduction histidine kinase, internal region RU84_17090 IPR036890 RU84_17090 RU84_17095 IPR000362 Fumarate lyase family RU84_17095 IPR008948 L-Aspartase-like RU84_17095 IPR009049 Argininosuccinate lyase RU84_17095 IPR020557 Fumarate lyase, conserved site RU84_17095 IPR022761 Fumarate lyase, N-terminal RU84_17095 IPR024083 Fumarase/histidase, N-terminal RU84_17095 IPR029419 Argininosuccinate lyase, C-terminal RU84_17100 IPR007457 Fe(II) trafficking protein YggX RU84_17100 IPR036766 RU84_17100 RU84_17105 IPR026022 PhoU domain RU84_17105 IPR028366 Phosphate transport system protein PhoU RU84_17105 IPR038078 RU84_17105 RU84_17110 IPR003423 Outer membrane efflux protein RU84_17110 IPR010130 Type I secretion outer membrane protein, TolC RU84_17115 IPR000620 Drug/metabolite transporter RU84_17120 IPR001647 DNA-binding HTH domain, TetR-type RU84_17120 IPR009057 Homeodomain-like RU84_17120 IPR036271 RU84_17120 RU84_17130 IPR002817 Thiamine biosynthesis protein ThiC RU84_17130 IPR025747 ThiC-associated domain RU84_17130 IPR037509 RU84_17130 RU84_17130 IPR038521 RU84_17130 RU84_17135 IPR000086 NUDIX hydrolase domain RU84_17135 IPR004385 Nucleoside diphosphate pyrophosphatase RU84_17135 IPR015797 NUDIX hydrolase domain-like RU84_17135 IPR020084 NUDIX hydrolase, conserved site RU84_17140 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RU84_17140 IPR013622 Calcineurin-like phosphoesterase C-terminal RU84_17140 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA RU84_17140 IPR029052 Metallo-dependent phosphatase-like RU84_17145 IPR000962 Zinc finger, DksA/TraR C4-type RU84_17145 IPR012784 RNA polymerase-binding transcription factor DksA RU84_17145 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RU84_17145 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria RU84_17145 IPR037187 RU84_17145 RU84_17150 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RU84_17150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_17150 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RU84_17150 IPR022380 Glutamyl-Q tRNA(Asp) synthetase RU84_17155 IPR001182 Cell cycle protein FtsW/RodA RU84_17155 IPR013437 Cell division protein FtsW RU84_17155 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site RU84_17160 IPR004101 Mur ligase, C-terminal RU84_17160 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase RU84_17160 IPR013221 Mur ligase, central RU84_17160 IPR036565 RU84_17160 RU84_17160 IPR036615 RU84_17160 RU84_17170 IPR006073 GTP binding domain RU84_17170 IPR011640 Ferrous iron transport protein B, C-terminal RU84_17170 IPR011642 Nucleoside recognition Gate RU84_17170 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_17170 IPR030389 RU84_17170 RU84_17175 IPR007167 Ferrous iron transporter FeoA domain RU84_17175 IPR008988 Transcriptional repressor, C-terminal RU84_17175 IPR038157 RU84_17175 RU84_17180 IPR002104 Integrase, catalytic RU84_17180 IPR004107 Integrase, SAM-like, N-terminal RU84_17180 IPR010998 Integrase, Lambda-type, N-terminal RU84_17180 IPR011010 DNA breaking-rejoining enzyme, catalytic core RU84_17180 IPR011932 Tyrosine recombinase XerD RU84_17180 IPR013762 Integrase-like, catalytic core RU84_17180 IPR023009 Tyrosine recombinase XerC/XerD RU84_17185 IPR009094 Disulphide bond isomerase, DsbC, N-terminal RU84_17185 IPR012336 Thioredoxin-like fold RU84_17185 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RU84_17185 IPR036249 RU84_17185 RU84_17190 IPR001342 Homoserine dehydrogenase, catalytic RU84_17190 IPR002912 ACT domain RU84_17190 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RU84_17190 IPR016204 Homoserine dehydrogenase RU84_17190 IPR019811 Homoserine dehydrogenase, conserved site RU84_17190 IPR036291 RU84_17190 RU84_17195 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RU84_17195 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RU84_17195 IPR004450 Threonine synthase-like RU84_17195 IPR026260 Threonine synthase, bacterial/archaeal RU84_17195 IPR036052 RU84_17195 RU84_17200 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RU84_17200 IPR012338 Beta-lactamase/transpeptidase-like RU84_17200 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RU84_17205 IPR000792 Transcription regulator LuxR, C-terminal RU84_17205 IPR001789 Signal transduction response regulator, receiver domain RU84_17205 IPR011006 CheY-like superfamily RU84_17210 IPR003594 Histidine kinase-like ATPase, C-terminal domain RU84_17210 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RU84_17210 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RU84_17210 IPR013767 PAS fold RU84_17210 IPR035965 RU84_17210 RU84_17210 IPR036097 RU84_17210 RU84_17210 IPR036890 RU84_17210 RU84_17215 IPR001789 Signal transduction response regulator, receiver domain RU84_17215 IPR002078 RNA polymerase sigma factor 54 interaction domain RU84_17215 IPR002197 DNA binding HTH domain, Fis-type RU84_17215 IPR003593 AAA+ ATPase domain RU84_17215 IPR009057 Homeodomain-like RU84_17215 IPR011006 CheY-like superfamily RU84_17215 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RU84_17215 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RU84_17215 IPR025944 Sigma-54 interaction domain, conserved site RU84_17215 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_17220 IPR004447 C-terminal-processing peptidase S41A RU84_17220 IPR005151 Tail specific protease RU84_17220 IPR029045 ClpP/crotonase-like domain RU84_17220 IPR036034 RU84_17220 RU84_17225 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent RU84_17225 IPR006124 Metalloenzyme RU84_17225 IPR011258 BPG-independent PGAM, N-terminal RU84_17225 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RU84_17225 IPR017850 Alkaline-phosphatase-like, core domain RU84_17225 IPR036646 RU84_17225 RU84_17230 IPR005495 Permease YjgP/YjgQ, predicted RU84_17230 IPR030923 RU84_17230 RU84_17235 IPR005495 Permease YjgP/YjgQ, predicted RU84_17235 IPR030922 RU84_17235 RU84_17240 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal RU84_17240 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal RU84_17240 IPR011356 Leucine aminopeptidase/peptidase B RU84_17240 IPR023042 Peptidase M17, leucine aminopeptidase RU84_17245 IPR007459 DNA polymerase III chi subunit, HolC RU84_17245 IPR036768 RU84_17245 RU84_17260 IPR001783 Lumazine-binding protein RU84_17260 IPR017938 Riboflavin synthase-like beta-barrel RU84_17260 IPR023366 ATP synthase subunit alpha-like domain RU84_17260 IPR026017 Lumazine-binding domain RU84_17265 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RU84_17265 IPR012327 D12 class N6 adenine-specific DNA methyltransferase RU84_17265 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_17270 IPR002125 CMP/dCMP deaminase, zinc-binding RU84_17270 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal RU84_17270 IPR004794 Riboflavin biosynthesis protein RibD RU84_17270 IPR011549 Riboflavin-specific deaminase, C-terminal RU84_17270 IPR016192 APOBEC/CMP deaminase, zinc-binding RU84_17270 IPR016193 Cytidine deaminase-like RU84_17270 IPR024072 Dihydrofolate reductase-like domain RU84_17275 IPR003796 Ribonucleotide reductase regulator NrdR-like RU84_17275 IPR005144 ATP-cone RU84_17280 IPR001905 Ammonium transporter RU84_17280 IPR002229 Blood group Rhesus C/E/D polypeptide RU84_17280 IPR018047 Ammonium transporter, conserved site RU84_17280 IPR024041 Ammonium transporter AmtB-like domain RU84_17280 IPR029020 Ammonium/urea transporter RU84_17285 IPR002187 Nitrogen regulatory protein PII RU84_17285 IPR002332 Nitrogen regulatory protein P-II, urydylation site RU84_17285 IPR011322 Nitrogen regulatory PII-like, alpha/beta RU84_17285 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RU84_17285 IPR017918 Nitrogen regulatory protein PII, conserved site RU84_17290 IPR007475 Membrane fusogenic activity RU84_17295 IPR000523 Magnesium chelatase, ChlI subunit RU84_17295 IPR003593 AAA+ ATPase domain RU84_17295 IPR004482 Mg chelatase-related protein RU84_17295 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RU84_17295 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_17295 IPR025158 Mg chelatase-related protein, C-terminal domain RU84_17295 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_17300 IPR000524 Transcription regulator HTH, GntR RU84_17300 IPR004839 Aminotransferase, class I/classII RU84_17300 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_17300 IPR015424 Pyridoxal phosphate-dependent transferase RU84_17300 IPR036388 RU84_17300 RU84_17300 IPR036390 RU84_17300 RU84_17305 IPR001303 Class II aldolase/adducin N-terminal RU84_17305 IPR036409 RU84_17305 RU84_17310 IPR002220 DapA-like RU84_17310 IPR013785 Aldolase-type TIM barrel RU84_17315 IPR010239 Conserved hypothetical protein CHP02001 RU84_17320 IPR005318 Outer membrane porin, bacterial RU84_17320 IPR023614 Porin domain RU84_17325 IPR008162 Inorganic pyrophosphatase RU84_17325 IPR036649 RU84_17325 RU84_17330 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein RU84_17330 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain RU84_17340 IPR000873 AMP-dependent synthetase/ligase RU84_17340 IPR020845 AMP-binding, conserved site RU84_17340 IPR025110 AMP-binding enzyme C-terminal domain RU84_17345 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RU84_17345 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative RU84_17345 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel RU84_17345 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain RU84_17345 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RU84_17345 IPR013760 DNA topoisomerase, type IIA-like domain RU84_17345 IPR035516 RU84_17345 RU84_17350 IPR005828 General substrate transporter RU84_17350 IPR005829 Sugar transporter, conserved site RU84_17350 IPR036259 RU84_17350 RU84_17355 IPR005115 Uncharacterised domain UPF0126 RU84_17360 IPR004027 SEC-C motif RU84_17360 IPR032710 RU84_17360 RU84_17365 IPR000644 CBS domain RU84_17365 IPR005170 Transporter-associated domain RU84_17365 IPR005496 Integral membrane protein TerC RU84_17365 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RU84_17365 IPR036318 RU84_17365 RU84_17370 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RU84_17370 IPR031100 RU84_17370 RU84_17375 IPR004638 Drug resistance transporter EmrB/QacA subfamily RU84_17375 IPR011701 Major facilitator superfamily RU84_17375 IPR036259 RU84_17375 RU84_17380 IPR002053 Glycoside hydrolase, family 25 RU84_17380 IPR017853 Glycoside hydrolase, superfamily RU84_17380 IPR018077 Glycoside hydrolase, family 25 subgroup RU84_17385 IPR001126 DNA-repair protein, UmuC-like RU84_17385 IPR017961 DNA polymerase, Y-family, little finger domain RU84_17385 IPR022880 DNA polymerase IV RU84_17385 IPR024728 DNA polymerase type-Y, HhH motif RU84_17385 IPR036775 RU84_17385 RU84_17390 IPR006175 YjgF/Yer057p/UK114 family RU84_17390 IPR035959 RU84_17390 RU84_17395 IPR024402 Domain of unknown function DUF2726 RU84_17400 IPR006638 Elongator protein 3/MiaB/NifB RU84_17400 IPR007197 Radical SAM RU84_17400 IPR013704 Uncharacterised protein family UPF0313, N-terminal RU84_17400 IPR020612 Methylthiotransferase, conserved site RU84_17400 IPR022946 Uncharacterised protein family UPF0313 RU84_17400 IPR023404 Radical SAM, alpha/beta horseshoe RU84_17400 IPR024560 Uncharacterised protein family UPF0313, C-terminal RU84_17405 IPR027372 Phytase-like domain RU84_17410 IPR000551 MerR-type HTH domain RU84_17410 IPR009061 DNA binding domain, putative RU84_17415 IPR021329 Protein of unknown function DUF2938 RU84_17420 IPR001226 Flavodoxin, conserved site RU84_17420 IPR005025 NADPH-dependent FMN reductase-like RU84_17420 IPR029039 Flavoprotein-like RU84_17425 IPR008258 Lytic transglycosylase-like SLT domain RU84_17425 IPR023346 Lysozyme-like domain RU84_17430 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RU84_17430 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RU84_17430 IPR005856 Cysteine synthase K/M RU84_17430 IPR005859 Cysteine synthase A RU84_17430 IPR036052 RU84_17430 RU84_17435 IPR016181 Acyl-CoA N-acyltransferase RU84_17465 IPR001647 DNA-binding HTH domain, TetR-type RU84_17465 IPR009057 Homeodomain-like RU84_17465 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RU84_17470 IPR018713 Domain of unknown function DUF2236 RU84_17480 IPR000531 TonB-dependent receptor, beta-barrel RU84_17480 IPR010100 TonB-dependent copper receptor RU84_17480 IPR012910 TonB-dependent receptor, plug RU84_17480 IPR036942 RU84_17480 RU84_17480 IPR037066 RU84_17480 RU84_17485 IPR021333 Protein of unknown function DUF2946 RU84_17490 IPR023635 Peptide deformylase RU84_17490 IPR036821 RU84_17490 RU84_17495 IPR018392 LysM domain RU84_17495 IPR036779 RU84_17495 RU84_17500 IPR003488 DNA recombination-mediator protein A RU84_17505 IPR006070 YrdC-like domain RU84_17505 IPR017945 DHBP synthase RibB-like alpha/beta domain RU84_17505 IPR023535 Threonylcarbamoyl-AMP synthase RU84_17510 IPR000620 Drug/metabolite transporter RU84_17515 IPR001647 DNA-binding HTH domain, TetR-type RU84_17515 IPR009057 Homeodomain-like RU84_17515 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RU84_17515 IPR036271 RU84_17515 RU84_17520 IPR011701 Major facilitator superfamily RU84_17520 IPR036259 RU84_17520 RU84_17525 IPR009057 Homeodomain-like RU84_17525 IPR011051 RmlC-like cupin domain RU84_17525 IPR018060 DNA binding HTH domain, AraC-type RU84_17525 IPR018062 HTH domain AraC-type, conserved site RU84_17530 IPR000889 Glutathione peroxidase RU84_17530 IPR029759 Glutathione peroxidase active site RU84_17530 IPR036249 RU84_17530 RU84_17540 IPR001469 ATPase, F1 complex, delta/epsilon subunit RU84_17540 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal RU84_17540 IPR036771 RU84_17540 RU84_17540 IPR036794 RU84_17540 RU84_17545 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RU84_17545 IPR003593 AAA+ ATPase domain RU84_17545 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RU84_17545 IPR005722 ATPase, F1 complex, beta subunit RU84_17545 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RU84_17545 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal RU84_17545 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_17545 IPR036121 RU84_17545 RU84_17550 IPR000131 ATPase, F1 complex, gamma subunit RU84_17550 IPR023632 ATPase, F1 complex, gamma subunit conserved site RU84_17550 IPR035968 RU84_17550 RU84_17555 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RU84_17555 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal RU84_17555 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RU84_17555 IPR005294 ATPase, F1 complex, alpha subunit RU84_17555 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RU84_17555 IPR023366 ATP synthase subunit alpha-like domain RU84_17555 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_17555 IPR036121 RU84_17555 RU84_17555 IPR038376 RU84_17555 RU84_17560 IPR000711 ATPase, OSCP/delta subunit RU84_17560 IPR020781 ATPase, OSCP/delta subunit, conserved site RU84_17560 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RU84_17565 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast RU84_17565 IPR005864 ATPase, F0 complex, subunit B, bacterial RU84_17565 IPR028987 F-type ATP synthase subunit B-like, membrane domain RU84_17570 IPR000454 ATPase, F0 complex, subunit C RU84_17570 IPR002379 V-ATPase proteolipid subunit C-like domain RU84_17570 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast RU84_17570 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site RU84_17570 IPR035921 RU84_17570 RU84_17570 IPR038662 RU84_17570 RU84_17575 IPR000568 ATPase, F0 complex, subunit A RU84_17575 IPR023011 ATPase, F0 complex, subunit A, active site RU84_17575 IPR035908 RU84_17575 RU84_17580 IPR005598 ATP synthase protein I RU84_17585 IPR006127 Periplasmic solute binding protein family RU84_17590 IPR002481 Ferric-uptake regulator RU84_17590 IPR036388 RU84_17590 RU84_17590 IPR036390 RU84_17590 RU84_17595 IPR003439 ABC transporter-like RU84_17595 IPR003593 AAA+ ATPase domain RU84_17595 IPR017871 ABC transporter, conserved site RU84_17595 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_17600 IPR001626 ABC-3 RU84_17600 IPR037294 RU84_17600 RU84_17605 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RU84_17610 IPR006314 Dyp-type peroxidase RU84_17610 IPR011008 Dimeric alpha-beta barrel RU84_17615 IPR001891 Malic oxidoreductase RU84_17615 IPR012301 Malic enzyme, N-terminal domain RU84_17615 IPR012302 Malic enzyme, NAD-binding RU84_17615 IPR015884 Malic enzyme, conserved site RU84_17615 IPR023667 NAD-dependent malic enzyme, proteobacteria RU84_17615 IPR036291 RU84_17615 RU84_17615 IPR037062 RU84_17615 RU84_17620 IPR001278 Arginine-tRNA ligase RU84_17620 IPR005148 Arginyl tRNA synthetase N-terminal domain RU84_17620 IPR008909 DALR anticodon binding RU84_17620 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RU84_17620 IPR035684 RU84_17620 RU84_17620 IPR036695 RU84_17620 RU84_17625 IPR007730 Sporulation-related domain RU84_17625 IPR036680 RU84_17625 RU84_17630 IPR004045 Glutathione S-transferase, N-terminal RU84_17630 IPR004046 Glutathione S-transferase, C-terminal RU84_17630 IPR036249 RU84_17630 RU84_17630 IPR036282 RU84_17630 RU84_17635 IPR003718 OsmC/Ohr family RU84_17635 IPR015946 K homology domain-like, alpha/beta RU84_17635 IPR036102 RU84_17635 RU84_17640 IPR003829 Pirin, N-terminal domain RU84_17640 IPR008778 Pirin, C-terminal domain RU84_17640 IPR011051 RmlC-like cupin domain RU84_17640 IPR012093 Pirin RU84_17640 IPR014710 RmlC-like jelly roll fold RU84_17645 IPR024476 Protein of unknown function DUF3861 RU84_17650 IPR005149 Transcription regulator PadR N-terminal RU84_17650 IPR036388 RU84_17650 RU84_17650 IPR036390 RU84_17650 RU84_17655 IPR002934 Nucleotidyl transferase domain RU84_17655 IPR025184 Domain of unknown function DUF4111 RU84_17660 IPR001674 GMP synthase, C-terminal RU84_17660 IPR004739 GMP synthase, N-terminal RU84_17660 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_17660 IPR017926 Glutamine amidotransferase RU84_17660 IPR022310 NAD/GMP synthase RU84_17660 IPR022955 GMP synthase RU84_17660 IPR029062 Class I glutamine amidotransferase-like RU84_17665 IPR007383 Protein of unknown function DUF445 RU84_17670 IPR032808 RU84_17670 RU84_17675 IPR032816 RU84_17675 RU84_17680 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RU84_17690 IPR025669 AAA domain RU84_17690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_17695 IPR007360 Invasion gene expression up-regulator, SirB RU84_17700 IPR002634 BolA protein RU84_17700 IPR036065 RU84_17700 RU84_17715 IPR008278 4'-phosphopantetheinyl transferase superfamily RU84_17715 IPR037143 RU84_17715 RU84_17720 IPR000073 Alpha/beta hydrolase fold-1 RU84_17720 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RU84_17720 IPR029058 Alpha/Beta hydrolase fold RU84_17720 IPR036291 RU84_17720 RU84_17730 IPR004869 Membrane transport protein, MMPL domain RU84_17730 IPR019587 Polyketide cyclase/dehydrase RU84_17730 IPR023393 START-like domain RU84_17730 IPR033399 RU84_17730 RU84_17735 IPR000873 AMP-dependent synthetase/ligase RU84_17735 IPR001031 Thioesterase RU84_17735 IPR001242 Condensation domain RU84_17735 IPR006162 Phosphopantetheine attachment site RU84_17735 IPR009081 Acyl carrier protein-like RU84_17735 IPR010071 Amino acid adenylation domain RU84_17735 IPR020802 Polyketide synthase, thioesterase domain RU84_17735 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RU84_17735 IPR020845 AMP-binding, conserved site RU84_17735 IPR023213 Chloramphenicol acetyltransferase-like domain RU84_17735 IPR025110 AMP-binding enzyme C-terminal domain RU84_17735 IPR029058 Alpha/Beta hydrolase fold RU84_17735 IPR036736 RU84_17735 RU84_17740 IPR009081 Acyl carrier protein-like RU84_17740 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RU84_17740 IPR036736 RU84_17740 RU84_17745 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_17745 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_17745 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_17745 IPR036250 RU84_17745 RU84_17745 IPR037069 RU84_17745 RU84_17750 IPR000873 AMP-dependent synthetase/ligase RU84_17750 IPR020845 AMP-binding, conserved site RU84_17755 IPR000792 Transcription regulator LuxR, C-terminal RU84_17755 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain RU84_17755 IPR016032 Signal transduction response regulator, C-terminal effector RU84_17755 IPR036388 RU84_17755 RU84_17755 IPR036693 RU84_17755 RU84_17760 IPR032598 RU84_17760 RU84_17765 IPR001690 Autoinducer synthesis protein RU84_17765 IPR016181 Acyl-CoA N-acyltransferase RU84_17770 IPR011701 Major facilitator superfamily RU84_17770 IPR036259 RU84_17770 RU84_17775 IPR029045 ClpP/crotonase-like domain RU84_17775 IPR032259 RU84_17775 RU84_17780 IPR001753 Crotonase superfamily RU84_17780 IPR014748 Crontonase, C-terminal RU84_17780 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RU84_17780 IPR029045 ClpP/crotonase-like domain RU84_17785 IPR006089 Acyl-CoA dehydrogenase, conserved site RU84_17785 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RU84_17785 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RU84_17785 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RU84_17785 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RU84_17785 IPR036250 RU84_17785 RU84_17785 IPR037069 RU84_17785 RU84_17790 IPR000873 AMP-dependent synthetase/ligase RU84_17790 IPR020845 AMP-binding, conserved site RU84_17790 IPR025110 AMP-binding enzyme C-terminal domain RU84_17795 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RU84_17795 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RU84_17795 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RU84_17795 IPR011548 3-hydroxyisobutyrate dehydrogenase RU84_17795 IPR013328 Dehydrogenase, multihelical RU84_17795 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type RU84_17795 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RU84_17795 IPR036291 RU84_17795 RU84_17800 IPR010061 Methylmalonate-semialdehyde dehydrogenase RU84_17800 IPR015590 Aldehyde dehydrogenase domain RU84_17800 IPR016160 Aldehyde dehydrogenase, cysteine active site RU84_17800 IPR016161 Aldehyde/histidinol dehydrogenase RU84_17800 IPR016162 Aldehyde dehydrogenase, N-terminal RU84_17800 IPR016163 Aldehyde dehydrogenase, C-terminal RU84_17805 IPR000847 Transcription regulator HTH, LysR RU84_17805 IPR005119 LysR, substrate-binding RU84_17805 IPR036388 RU84_17805 RU84_17805 IPR036390 RU84_17805 RU84_17810 IPR002293 Amino acid/polyamine transporter I RU84_17810 IPR004840 Amino acid permease, conserved site RU84_17810 IPR004841 Amino acid permease/ SLC12A domain RU84_17815 IPR002293 Amino acid/polyamine transporter I RU84_17815 IPR004840 Amino acid permease, conserved site RU84_17815 IPR004841 Amino acid permease/ SLC12A domain RU84_17820 IPR006175 YjgF/Yer057p/UK114 family RU84_17820 IPR035959 RU84_17820 RU84_17825 IPR000821 Alanine racemase RU84_17825 IPR001608 Alanine racemase, N-terminal RU84_17825 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RU84_17825 IPR011079 Alanine racemase, C-terminal RU84_17825 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RU84_17825 IPR029066 PLP-binding barrel RU84_17830 IPR006076 FAD dependent oxidoreductase RU84_17830 IPR023080 D-amino acid dehydrogenase small subunit, DadA RU84_17830 IPR036188 RU84_17830 RU84_17835 IPR000485 AsnC-type HTH domain RU84_17835 IPR011008 Dimeric alpha-beta barrel RU84_17835 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RU84_17835 IPR019887 Transcription regulator AsnC-type, C-terminal RU84_17835 IPR019888 Transcription regulator AsnC-type RU84_17835 IPR036388 RU84_17835 RU84_17835 IPR036390 RU84_17835 RU84_17840 IPR012429 Protein of unknown function DUF1624 RU84_17845 IPR000531 TonB-dependent receptor, beta-barrel RU84_17845 IPR010105 TonB-dependent siderophore receptor RU84_17845 IPR012910 TonB-dependent receptor, plug RU84_17845 IPR036942 RU84_17845 RU84_17845 IPR037066 RU84_17845 RU84_17850 IPR032710 RU84_17850 RU84_17850 IPR037401 RU84_17850 RU84_17855 IPR009671 Regulator of ribonuclease activity B domain RU84_17855 IPR036701 RU84_17855 RU84_17860 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RU84_17860 IPR020103 Pseudouridine synthase, catalytic domain RU84_17865 IPR010406 Protein of unknown function DUF1003 RU84_17870 IPR002347 Glucose/ribitol dehydrogenase RU84_17870 IPR036291 RU84_17870 RU84_17875 IPR014030 Beta-ketoacyl synthase, N-terminal RU84_17875 IPR014031 Beta-ketoacyl synthase, C-terminal RU84_17875 IPR016039 Thiolase-like RU84_17875 IPR018201 Beta-ketoacyl synthase, active site RU84_17875 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RU84_17880 IPR024524 Protein of unknown function DUF3800 RU84_17885 IPR003477 mRNA interferase PemK-like protein RU84_17885 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor RU84_17890 IPR000086 NUDIX hydrolase domain RU84_17890 IPR015797 NUDIX hydrolase domain-like RU84_17890 IPR020084 NUDIX hydrolase, conserved site RU84_17890 IPR020476 NUDIX hydrolase RU84_17895 IPR025196 Domain of unknown function DUF4126 RU84_17905 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RU84_17905 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RU84_17905 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent RU84_17905 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RU84_17905 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RU84_17905 IPR036008 RU84_17905 RU84_17910 IPR002020 Citrate synthase-like RU84_17910 IPR011278 2-methylcitrate synthase/citrate synthase type I RU84_17910 IPR016142 Citrate synthase-like, large alpha subdomain RU84_17910 IPR016143 Citrate synthase-like, small alpha subdomain RU84_17910 IPR019810 Citrate synthase active site RU84_17910 IPR024176 Citrate synthase, bacterial-type RU84_17910 IPR036969 RU84_17910 RU84_17915 IPR012695 Methylisocitrate lyase RU84_17915 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RU84_17915 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site RU84_17920 IPR000524 Transcription regulator HTH, GntR RU84_17920 IPR008920 Transcription regulator FadR/GntR, C-terminal RU84_17920 IPR011711 GntR, C-terminal RU84_17920 IPR036388 RU84_17920 RU84_17920 IPR036390 RU84_17920 RU84_17925 IPR000796 Aspartate/other aminotransferase RU84_17925 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RU84_17925 IPR004839 Aminotransferase, class I/classII RU84_17925 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_17925 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_17925 IPR015424 Pyridoxal phosphate-dependent transferase RU84_17930 IPR006094 FAD linked oxidase, N-terminal RU84_17930 IPR012256 D-lactate dehydrogenase RU84_17930 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal RU84_17930 IPR016164 FAD-linked oxidase-like, C-terminal RU84_17930 IPR016167 FAD-binding, type 2, subdomain 1 RU84_17930 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RU84_17930 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 RU84_17930 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 RU84_17930 IPR036318 RU84_17930 RU84_17935 IPR000262 FMN-dependent dehydrogenase RU84_17935 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site RU84_17935 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent RU84_17935 IPR013785 Aldolase-type TIM barrel RU84_17935 IPR020920 L-lactate dehydrogenase, bacterial RU84_17940 IPR000524 Transcription regulator HTH, GntR RU84_17940 IPR008920 Transcription regulator FadR/GntR, C-terminal RU84_17940 IPR011711 GntR, C-terminal RU84_17940 IPR036388 RU84_17940 RU84_17940 IPR036390 RU84_17940 RU84_17945 IPR003804 L-lactate permease RU84_17950 IPR005841 Alpha-D-phosphohexomutase superfamily RU84_17950 IPR005843 Alpha-D-phosphohexomutase, C-terminal RU84_17950 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RU84_17950 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RU84_17950 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RU84_17950 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RU84_17950 IPR016066 Alpha-D-phosphohexomutase, conserved site RU84_17950 IPR036900 RU84_17950 RU84_17955 IPR005886 UDP-glucose 4-epimerase GalE RU84_17955 IPR016040 NAD(P)-binding domain RU84_17955 IPR036291 RU84_17955 RU84_17960 IPR001672 Phosphoglucose isomerase (PGI) RU84_17960 IPR018189 Phosphoglucose isomerase, conserved site RU84_17960 IPR023096 Phosphoglucose isomerase, C-terminal RU84_17965 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RU84_17965 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RU84_17965 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RU84_17965 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RU84_17965 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type RU84_17965 IPR036220 RU84_17965 RU84_17965 IPR036291 RU84_17965 RU84_17970 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type RU84_17970 IPR005835 Nucleotidyl transferase RU84_17970 IPR029044 Nucleotide-diphospho-sugar transferases RU84_17975 IPR003362 Bacterial sugar transferase RU84_17980 IPR001173 Glycosyltransferase 2-like RU84_17980 IPR029044 Nucleotide-diphospho-sugar transferases RU84_17985 IPR001296 Glycosyl transferase, family 1 RU84_18000 IPR002797 Polysaccharide biosynthesis protein RU84_18005 IPR013132 N-acetylneuraminic acid synthase, N-terminal RU84_18005 IPR013785 Aldolase-type TIM barrel RU84_18005 IPR013974 SAF domain RU84_18005 IPR020030 Pseudaminic acid biosynthesis, PseI RU84_18005 IPR036732 RU84_18005 RU84_18010 IPR002539 MaoC-like domain RU84_18010 IPR016181 Acyl-CoA N-acyltransferase RU84_18010 IPR020036 Pseudaminic acid biosynthesis, PseH RU84_18010 IPR029069 HotDog domain RU84_18015 IPR020023 Pseudaminic acid biosynthesis-associated protein PseG RU84_18020 IPR003329 Acylneuraminate cytidylyltransferase RU84_18020 IPR020039 Pseudaminic acid biosynthesis, PseF RU84_18020 IPR029044 Nucleotide-diphospho-sugar transferases RU84_18025 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RU84_18025 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RU84_18025 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RU84_18025 IPR015424 Pyridoxal phosphate-dependent transferase RU84_18025 IPR020026 Pseudaminic acid biosynthesis, PseC RU84_18030 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RU84_18030 IPR020025 Pseudaminic acid biosynthesis, PseB RU84_18030 IPR036291 RU84_18030 RU84_18035 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RU84_18035 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RU84_18035 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RU84_18035 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RU84_18035 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RU84_18035 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase RU84_18035 IPR036220 RU84_18035 RU84_18035 IPR036291 RU84_18035 RU84_18040 IPR003715 Polysaccharide export protein RU84_18045 IPR017867 Protein-tyrosine phosphatase, low molecular weight RU84_18045 IPR023485 Phosphotyrosine protein phosphatase I superfamily RU84_18045 IPR036196 RU84_18045 RU84_18050 IPR003856 Lipopolysaccharide biosynthesis RU84_18050 IPR005702 Exopolysaccharide synthesis protein RU84_18050 IPR025669 AAA domain RU84_18050 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_18050 IPR032807 RU84_18050 RU84_18055 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal RU84_18055 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RU84_18055 IPR036944 RU84_18055 RU84_18060 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal RU84_18060 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RU84_18060 IPR008104 Macrophage infectivity potentiator RU84_18060 IPR036944 RU84_18060 RU84_18065 IPR004268 Flagellin assembly, membrane protein MviN RU84_18070 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RU84_18070 IPR036505 RU84_18070 RU84_18075 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal RU84_18075 IPR004393 Nicotinate-nucleotide pyrophosphorylase RU84_18075 IPR013785 Aldolase-type TIM barrel RU84_18075 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal RU84_18075 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD RU84_18075 IPR036068 RU84_18075 RU84_18075 IPR037128 RU84_18075 RU84_18085 IPR007312 Phosphoesterase RU84_18085 IPR008475 Bacterial phospholipase C, C-terminal domain RU84_18085 IPR017767 Bacterial phospholipase C, phosphocholine-specific RU84_18085 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RU84_18090 IPR001247 Exoribonuclease, phosphorolytic domain 1 RU84_18090 IPR002381 Ribonuclease phosphorolytic, bacterial-type RU84_18090 IPR015847 Exoribonuclease, phosphorolytic domain 2 RU84_18090 IPR018336 Ribonuclease PH, conserved site RU84_18090 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_18090 IPR027408 PNPase/RNase PH domain RU84_18090 IPR036345 RU84_18090 RU84_18095 IPR005804 Fatty acid desaturase, type 1 RU84_18100 IPR000951 Phthalate dioxygenase reductase RU84_18100 IPR001433 Oxidoreductase FAD/NAD(P)-binding RU84_18100 IPR008333 Oxidoreductase, FAD-binding domain RU84_18100 IPR012675 Beta-grasp domain RU84_18100 IPR017938 Riboflavin synthase-like beta-barrel RU84_18100 IPR036010 RU84_18100 RU84_18100 IPR039261 RU84_18100 RU84_18105 IPR001647 DNA-binding HTH domain, TetR-type RU84_18105 IPR009057 Homeodomain-like RU84_18110 IPR001647 DNA-binding HTH domain, TetR-type RU84_18110 IPR009057 Homeodomain-like RU84_18115 IPR001853 DSBA-like thioredoxin domain RU84_18115 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL RU84_18115 IPR036249 RU84_18115 RU84_18120 IPR010233 Ubiquinone biosynthesis O-methyltransferase RU84_18120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RU84_18125 IPR006439 HAD hydrolase, subfamily IA RU84_18125 IPR023198 Phosphoglycolate phosphatase, domain 2 RU84_18125 IPR023214 HAD-like domain RU84_18125 IPR036412 RU84_18125 RU84_18130 IPR002347 Glucose/ribitol dehydrogenase RU84_18130 IPR020904 Short-chain dehydrogenase/reductase, conserved site RU84_18130 IPR036291 RU84_18130 RU84_18135 IPR024572 Protein of unknown function DUF3315 RU84_18140 IPR024572 Protein of unknown function DUF3315 RU84_18145 IPR000182 GNAT domain RU84_18145 IPR001048 Aspartate/glutamate/uridylate kinase RU84_18145 IPR010167 Amino-acid N-acetyltransferase (ArgA) RU84_18145 IPR016181 Acyl-CoA N-acyltransferase RU84_18145 IPR036393 RU84_18145 RU84_18150 IPR001638 Extracellular solute-binding protein, family 3 RU84_18150 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates RU84_18150 IPR015168 SsuA/THI5-like RU84_18155 IPR001638 Extracellular solute-binding protein, family 3 RU84_18155 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates RU84_18160 IPR011251 Luciferase-like domain RU84_18160 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent RU84_18160 IPR036661 RU84_18160 RU84_18165 IPR000515 MetI-like domain RU84_18165 IPR035906 RU84_18165 RU84_18170 IPR003439 ABC transporter-like RU84_18170 IPR003593 AAA+ ATPase domain RU84_18170 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_18175 IPR001647 DNA-binding HTH domain, TetR-type RU84_18175 IPR009057 Homeodomain-like RU84_18175 IPR013573 Transcription regulator YcdC, C-terminal RU84_18175 IPR036271 RU84_18175 RU84_18180 IPR000845 Nucleoside phosphorylase domain RU84_18180 IPR035994 RU84_18180 RU84_18185 IPR004695 Voltage-dependent anion channel RU84_18185 IPR038665 RU84_18185 RU84_18190 IPR002606 Riboflavin kinase, bacterial RU84_18190 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_18190 IPR015864 FAD synthetase RU84_18190 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic RU84_18190 IPR023465 Riboflavin kinase domain RU84_18195 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RU84_18195 IPR002300 Aminoacyl-tRNA synthetase, class Ia RU84_18195 IPR002301 Isoleucine-tRNA ligase RU84_18195 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RU84_18195 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RU84_18195 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase RU84_18195 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RU84_18195 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RU84_18195 IPR023585 Isoleucine-tRNA ligase, type 1 RU84_18200 IPR001872 Peptidase A8, signal peptidase II RU84_18205 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RU84_18210 IPR005025 NADPH-dependent FMN reductase-like RU84_18210 IPR029039 Flavoprotein-like RU84_18215 IPR020683 Ankyrin repeat-containing domain RU84_18215 IPR036770 RU84_18215 RU84_18245 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain RU84_18245 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site RU84_18245 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase RU84_18245 IPR029000 Cyclophilin-like domain RU84_18250 IPR013094 Alpha/beta hydrolase fold-3 RU84_18250 IPR029058 Alpha/Beta hydrolase fold RU84_18265 IPR001279 Beta-lactamase-like RU84_18265 IPR036866 RU84_18265 RU84_18270 IPR000847 Transcription regulator HTH, LysR RU84_18270 IPR005119 LysR, substrate-binding RU84_18270 IPR036388 RU84_18270 RU84_18270 IPR036390 RU84_18270 RU84_18275 IPR000740 GrpE nucleotide exchange factor RU84_18275 IPR009012 GrpE nucleotide exchange factor, head RU84_18275 IPR013805 GrpE nucleotide exchange factor, coiled-coil RU84_18280 IPR012725 Chaperone DnaK RU84_18280 IPR013126 Heat shock protein 70 family RU84_18280 IPR018181 Heat shock protein 70, conserved site RU84_18280 IPR029047 Heat shock protein 70kD, peptide-binding domain RU84_18280 IPR029048 Heat shock protein 70kD, C-terminal domain RU84_18285 IPR001818 Peptidase M10, metallopeptidase RU84_18285 IPR006026 Peptidase, metallopeptidase RU84_18285 IPR021190 Peptidase M10A RU84_18285 IPR024079 Metallopeptidase, catalytic domain RU84_18290 IPR001818 Peptidase M10, metallopeptidase RU84_18290 IPR006026 Peptidase, metallopeptidase RU84_18290 IPR021190 Peptidase M10A RU84_18300 IPR002477 Peptidoglycan binding-like RU84_18300 IPR011970 Lytic murein transglycosylase RU84_18300 IPR023346 Lysozyme-like domain RU84_18300 IPR031304 RU84_18300 RU84_18300 IPR036365 RU84_18300 RU84_18300 IPR036366 RU84_18300 RU84_18305 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RU84_18305 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit RU84_18305 IPR011054 Rudiment single hybrid motif RU84_18305 IPR013815 ATP-grasp fold, subdomain 1 RU84_18305 IPR016185 Pre-ATP-grasp domain RU84_18310 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain RU84_18310 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE RU84_18310 IPR033747 RU84_18310 RU84_18310 IPR035893 RU84_18310 RU84_18320 IPR007437 Protein of unknown function DUF486 RU84_18325 IPR000713 Mur ligase, N-terminal RU84_18325 IPR004101 Mur ligase, C-terminal RU84_18325 IPR005757 Murein peptide ligase RU84_18325 IPR013221 Mur ligase, central RU84_18325 IPR036565 RU84_18325 RU84_18325 IPR036615 RU84_18325 RU84_18330 IPR010640 Low temperature requirement A RU84_18335 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RU84_18335 IPR036938 RU84_18335 RU84_18340 IPR005496 Integral membrane protein TerC RU84_18340 IPR022369 Integral membrane protein TerC, riboswitch-linked RU84_18350 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain RU84_18350 IPR016185 Pre-ATP-grasp domain RU84_18355 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RU84_18355 IPR036922 RU84_18355 RU84_18360 IPR006680 Amidohydrolase 1 RU84_18360 IPR011059 Metal-dependent hydrolase, composite domain RU84_18360 IPR014311 Guanine deaminase RU84_18360 IPR032466 RU84_18360 RU84_18370 IPR000836 Phosphoribosyltransferase domain RU84_18370 IPR005904 Hypoxanthine phosphoribosyl transferase RU84_18370 IPR029057 Phosphoribosyltransferase-like RU84_18375 IPR007341 Transglycosylase-associated protein RU84_18380 IPR009094 Disulphide bond isomerase, DsbC, N-terminal RU84_18380 IPR012336 Thioredoxin-like fold RU84_18380 IPR017937 Thioredoxin, conserved site RU84_18380 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RU84_18380 IPR036249 RU84_18380 RU84_18385 IPR002524 Cation efflux protein RU84_18385 IPR027469 Cation efflux protein transmembrane domain RU84_18390 IPR003735 Metal-sensitive transcriptional repressor RU84_18390 IPR038390 RU84_18390 RU84_18395 IPR004520 tRNA modification GTPase MnmE RU84_18395 IPR005225 Small GTP-binding protein domain RU84_18395 IPR006073 GTP binding domain RU84_18395 IPR018948 GTP-binding protein TrmE, N-terminal RU84_18395 IPR025867 tRNA modification GTPase MnmE C-terminal domain RU84_18395 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RU84_18395 IPR027368 tRNA modification GTPase MnmE domain 2 RU84_18395 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_18400 IPR001708 Membrane insertase OXA1/ALB3/YidC RU84_18400 IPR019998 Membrane insertase YidC RU84_18400 IPR028053 Membrane insertase YidC, N-terminal RU84_18400 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RU84_18400 IPR038210 RU84_18400 RU84_18400 IPR038221 RU84_18400 RU84_18405 IPR002696 Putative membrane protein insertion efficiency factor RU84_18410 IPR000100 Ribonuclease P RU84_18410 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RU84_18410 IPR020539 Ribonuclease P, conserved site RU84_18410 IPR020568 Ribosomal protein S5 domain 2-type fold RU84_18415 IPR000271 Ribosomal protein L34 RU84_18415 IPR020939 Ribosomal protein L34, conserved site RU84_18445 IPR012310 DNA ligase, ATP-dependent, central RU84_18445 IPR012340 Nucleic acid-binding, OB-fold RU84_18450 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RU84_18450 IPR020590 Guanylate kinase, conserved site RU84_18450 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_18465 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RU84_18465 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_18475 IPR002104 Integrase, catalytic RU84_18475 IPR011010 DNA breaking-rejoining enzyme, catalytic core RU84_18475 IPR013762 Integrase-like, catalytic core RU84_18480 IPR001387 Cro/C1-type helix-turn-helix domain RU84_18480 IPR010982 Lambda repressor-like, DNA-binding domain RU84_18490 IPR006538 Cobalt chelatase, CobT subunit RU84_18490 IPR025861 Cobalamin biosynthesis protein CobT VWA domain RU84_18490 IPR036465 RU84_18490 RU84_18495 IPR011704 ATPase, dynein-related, AAA domain RU84_18495 IPR013615 CbbQ/NirQ/NorQ, C-terminal RU84_18495 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_18510 IPR003141 Polymerase/histidinol phosphatase, N-terminal RU84_18510 IPR004013 PHP, C-terminal RU84_18510 IPR004805 DNA polymerase III, alpha subunit RU84_18510 IPR011708 Bacterial DNA polymerase III, alpha subunit RU84_18515 IPR003615 HNH nuclease RU84_18515 IPR010902 NUMOD4 RU84_18520 IPR005122 Uracil-DNA glycosylase-like RU84_18520 IPR029460 DNA polymerase, helix-hairpin-helix motif RU84_18520 IPR036895 RU84_18520 RU84_18535 IPR002421 5'-3' exonuclease, N-terminal RU84_18535 IPR008918 Helix-hairpin-helix motif, class 2 RU84_18535 IPR020045 5'-3' exonuclease, C-terminal domain RU84_18535 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal RU84_18535 IPR029060 PIN domain-like RU84_18535 IPR036279 RU84_18535 RU84_18540 IPR003586 Hint domain C-terminal RU84_18540 IPR006142 Intein RU84_18540 IPR013765 DNA recombination and repair protein RecA RU84_18540 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_18540 IPR027434 Homing endonuclease RU84_18540 IPR030934 RU84_18540 RU84_18540 IPR036844 RU84_18540 RU84_18560 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RU84_18560 IPR029052 Metallo-dependent phosphatase-like RU84_18565 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_18565 IPR038729 RU84_18565 RU84_18575 IPR012337 Ribonuclease H-like domain RU84_18575 IPR036397 RU84_18575 RU84_18585 IPR000788 Ribonucleotide reductase large subunit, C-terminal RU84_18585 IPR005144 ATP-cone RU84_18585 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal RU84_18585 IPR013346 Ribonucleotide reductase, class I , alpha subunit RU84_18585 IPR013509 Ribonucleotide reductase large subunit, N-terminal RU84_18590 IPR000358 Ribonucleotide reductase small subunit RU84_18590 IPR009078 Ferritin-like superfamily RU84_18590 IPR012348 Ribonucleotide reductase-related RU84_18595 IPR036098 RU84_18595 RU84_18615 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core RU84_18620 IPR012337 Ribonuclease H-like domain RU84_18620 IPR032874 RU84_18620 RU84_18625 IPR001789 Signal transduction response regulator, receiver domain RU84_18625 IPR011006 CheY-like superfamily RU84_18630 IPR000917 Sulfatase RU84_18630 IPR012549 Domain of unknown function DUF1705 RU84_18630 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RU84_18630 IPR017850 Alkaline-phosphatase-like, core domain RU84_18640 IPR008030 NmrA-like domain RU84_18640 IPR036291 RU84_18640 RU84_18645 IPR006054 DNA polymerase III, epsilon subunit RU84_18645 IPR012337 Ribonuclease H-like domain RU84_18645 IPR013520 Exonuclease, RNase T/DNA polymerase III RU84_18645 IPR036397 RU84_18645 RU84_18660 IPR010818 Protein of unknown function DUF1420 RU84_18685 IPR025668 Transposase DDE domain RU84_18690 IPR011032 GroES (chaperonin 10)-like RU84_18695 IPR011032 GroES (chaperonin 10)-like RU84_18700 IPR001647 DNA-binding HTH domain, TetR-type RU84_18700 IPR009057 Homeodomain-like RU84_18700 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RU84_18700 IPR036271 RU84_18700 RU84_18710 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RU84_18710 IPR013785 Aldolase-type TIM barrel RU84_18715 IPR002818 ThiJ/PfpI RU84_18715 IPR029062 Class I glutamine amidotransferase-like RU84_18720 IPR001670 Alcohol dehydrogenase, iron-type RU84_18720 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RU84_18725 IPR011008 Dimeric alpha-beta barrel RU84_18730 IPR000801 Putative esterase RU84_18730 IPR014186 S-formylglutathione hydrolase RU84_18730 IPR029058 Alpha/Beta hydrolase fold RU84_18735 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RU84_18735 IPR011032 GroES (chaperonin 10)-like RU84_18735 IPR013149 Alcohol dehydrogenase, C-terminal RU84_18735 IPR013154 Alcohol dehydrogenase GroES-like RU84_18735 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase RU84_18735 IPR020843 Polyketide synthase, enoylreductase RU84_18735 IPR036291 RU84_18735 RU84_18740 IPR003735 Metal-sensitive transcriptional repressor RU84_18740 IPR038390 RU84_18740 RU84_18745 IPR001584 Integrase, catalytic core RU84_18745 IPR012337 Ribonuclease H-like domain RU84_18745 IPR036397 RU84_18745 RU84_18750 IPR002514 Transposase IS3/IS911family RU84_18750 IPR009057 Homeodomain-like RU84_18760 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RU84_18760 IPR011032 GroES (chaperonin 10)-like RU84_18760 IPR013154 Alcohol dehydrogenase GroES-like RU84_18760 IPR020843 Polyketide synthase, enoylreductase RU84_18760 IPR027399 Alcohol dehydrogenase GroES-associated N-terminal domain RU84_18760 IPR036291 RU84_18760 RU84_18825 IPR018392 LysM domain RU84_18825 IPR036779 RU84_18825 RU84_18840 IPR001650 Helicase, C-terminal RU84_18840 IPR006935 Helicase/UvrB domain RU84_18840 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RU84_18840 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_18845 IPR003115 ParB/Sulfiredoxin RU84_18845 IPR036086 RU84_18845 RU84_18855 IPR003115 ParB/Sulfiredoxin RU84_18855 IPR036086 RU84_18855 RU84_18860 IPR003439 ABC transporter-like RU84_18860 IPR003593 AAA+ ATPase domain RU84_18860 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_18865 IPR013766 Thioredoxin domain RU84_18865 IPR036249 RU84_18865 RU84_18875 IPR036388 RU84_18875 RU84_18875 IPR036390 RU84_18875 RU84_18895 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_18895 IPR035412 RU84_18895 RU84_18895 IPR035421 RU84_18895 RU84_18965 IPR010265 Bacteriophage lambda, GpM, minor tail RU84_18970 IPR006487 Bacteriophage lambda, GpL, minor tail RU84_18975 IPR000064 Endopeptidase, NLPC/P60 domain RU84_18975 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain RU84_18975 IPR028090 JAB domain, prokaryotic RU84_18975 IPR038765 RU84_18975 RU84_18985 IPR008979 Galactose-binding domain-like RU84_18985 IPR013783 Immunoglobulin-like fold RU84_18985 IPR032876 RU84_18985 RU84_18985 IPR036116 RU84_18985 RU84_19015 IPR002196 Glycoside hydrolase, family 24 RU84_19015 IPR023346 Lysozyme-like domain RU84_19020 IPR000525 Initiator Rep protein RU84_19020 IPR036388 RU84_19020 RU84_19020 IPR036390 RU84_19020 RU84_19035 IPR007694 DNA helicase, DnaB-like, C-terminal RU84_19035 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_19040 IPR013264 DNA primase, catalytic core, N-terminal RU84_19040 IPR037068 RU84_19040 RU84_19045 IPR001279 Beta-lactamase-like RU84_19045 IPR036866 RU84_19045 RU84_19055 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain RU84_19055 IPR011060 Ribulose-phosphate binding barrel RU84_19055 IPR013785 Aldolase-type TIM barrel RU84_19060 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RU84_19060 IPR036929 RU84_19060 RU84_19070 IPR011032 GroES (chaperonin 10)-like RU84_19070 IPR018369 Chaperonin Cpn10, conserved site RU84_19070 IPR020818 Chaperonin Cpn10 RU84_19070 IPR037124 RU84_19070 RU84_19075 IPR001844 Chaperonin Cpn60 RU84_19075 IPR002423 Chaperonin Cpn60/TCP-1 RU84_19075 IPR018370 Chaperonin Cpn60, conserved site RU84_19075 IPR027409 GroEL-like apical domain RU84_19075 IPR027410 TCP-1-like chaperonin intermediate domain RU84_19075 IPR027413 GroEL-like equatorial domain RU84_19095 IPR001584 Integrase, catalytic core RU84_19095 IPR012337 Ribonuclease H-like domain RU84_19095 IPR025246 Transposase IS30-like HTH domain RU84_19095 IPR036397 RU84_19095 RU84_19100 IPR006118 Recombinase, conserved site RU84_19100 IPR006119 Resolvase, N-terminal RU84_19100 IPR009057 Homeodomain-like RU84_19100 IPR036162 RU84_19100 RU84_19120 IPR002071 Thermonuclease active site RU84_19120 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold RU84_19120 IPR035437 RU84_19120 RU84_19130 IPR014158 Type IV secretion system, VirB5 RU84_19130 IPR023220 Type IV secretion system, VirB5-domain RU84_19135 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain RU84_19135 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_19140 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 RU84_19145 IPR000189 Prokaryotic transglycosylase, active site RU84_19145 IPR008258 Lytic transglycosylase-like SLT domain RU84_19145 IPR023346 Lysozyme-like domain RU84_19155 IPR019476 Type IV secretion system, TraD, DNA-binding domain RU84_19155 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_19160 IPR008258 Lytic transglycosylase-like SLT domain RU84_19160 IPR014158 Type IV secretion system, VirB5 RU84_19160 IPR023220 Type IV secretion system, VirB5-domain RU84_19160 IPR023346 Lysozyme-like domain RU84_19175 IPR001482 Type II secretion system protein E RU84_19175 IPR014155 Type IV secretion system protein VirB11 RU84_19175 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_19180 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI RU84_19185 IPR010258 Conjugal transfer, TrbG/VirB9/CagX RU84_19185 IPR038161 RU84_19185 RU84_19190 IPR007430 Bacterial virulence protein VirB8 RU84_19190 IPR032710 RU84_19190 RU84_19195 IPR007688 Conjugal transfer, TrbL/VirB6 RU84_19220 IPR025669 AAA domain RU84_19220 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_19260 IPR021944 Protein of unknown function DUF3560 RU84_19280 IPR009444 Conjugal transfer, TraD, alpha-type RU84_19285 IPR005053 MobA/MobL protein RU84_19285 IPR027351 (+) RNA virus helicase core domain RU84_19285 IPR027417 P-loop containing nucleoside triphosphate hydrolase RU84_19290 IPR009553 Protein of unknown function DUF1173 RU84_19305 IPR010921 Trp repressor/replication initiator RU84_19310 IPR001584 Integrase, catalytic core RU84_19310 IPR012337 Ribonuclease H-like domain RU84_19310 IPR036397 RU84_19310 RU84_19315 IPR002575 Aminoglycoside phosphotransferase RU84_19315 IPR011009 Protein kinase-like domain RU84_19315 IPR024165 Aminoglycoside 3-phosphotransferase RU84_19320 IPR001584 Integrase, catalytic core RU84_19320 IPR012337 Ribonuclease H-like domain RU84_19320 IPR025246 Transposase IS30-like HTH domain RU84_19320 IPR036397 RU84_19320 RU84_19335 IPR006015 Universal stress protein A RU84_19335 IPR006016 UspA RU84_19340 IPR002645 STAS domain RU84_19340 IPR011547 Sulphate transporter RU84_19340 IPR018045 Sulphate anion transporter, conserved site RU84_19340 IPR036513 RU84_19340 RU84_19345 IPR009241 Addiction module killer protein RU84_19350 IPR001387 Cro/C1-type helix-turn-helix domain RU84_19350 IPR010982 Lambda repressor-like, DNA-binding domain RU84_19350 IPR039554 RU84_19350 RU84_19360 IPR006597 Sel1-like RU84_19360 IPR011990 Tetratricopeptide-like helical domain RU84_19365 IPR018958 SMI1/KNR4 like domain RU84_19365 IPR037883 RU84_19365 RU84_19380 IPR000525 Initiator Rep protein RU84_19380 IPR036388 RU84_19380 RU84_19380 IPR036390 RU84_19380