locus-tag	class	description
Aba7804_00030	COG1538	Outer membrane efflux protein
Aba7804_00035	COG0697	spore germination
Aba7804_00060	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
Aba7804_00065	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
Aba7804_00070	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Aba7804_00075	COG0772	Belongs to the SEDS family
Aba7804_00100	COG4974	Belongs to the 'phage' integrase family
Aba7804_00105	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Aba7804_00115	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
Aba7804_00125	COG2197	response regulator
Aba7804_00145	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
Aba7804_00150	COG0795	lipopolysaccharide-transporting ATPase activity
Aba7804_00190	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Aba7804_00190	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Aba7804_00205	COG0347	Belongs to the P(II) protein family
Aba7804_00220	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Aba7804_00230	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Aba7804_00245	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
Aba7804_00260	COG0318	PFAM AMP-dependent synthetase and ligase
Aba7804_00270	COG0477	Major facilitator Superfamily
Aba7804_00275	COG2860	membrane
Aba7804_00285	COG1253	flavin adenine dinucleotide binding
Aba7804_00295	COG0477	Major facilitator Superfamily
Aba7804_00305	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Aba7804_00310	COG0745	RESPONSE REGULATOR receiver
Aba7804_00315	COG2205	protein histidine kinase activity
Aba7804_00320	COG4452	Inner membrane protein CreD
Aba7804_00360	COG0655	NAD(P)H dehydrogenase (quinone) activity
Aba7804_00370	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Aba7804_00440	COG0758	DNA mediated transformation
Aba7804_00450	COG0697	spore germination
Aba7804_00455	COG1309	transcriptional regulator
Aba7804_00470	COG0386	Belongs to the glutathione peroxidase family
Aba7804_00535	COG1121	(ABC) transporter
Aba7804_00540	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Aba7804_00545	COG1280	lysine exporter protein (LysE YggA)
Aba7804_00550	COG2837	iron assimilation
Aba7804_00555	COG0281	malic enzyme
Aba7804_00600	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Aba7804_00600	COG0519	Catalyzes the synthesis of GMP from XMP
Aba7804_00605	COG4399	Belongs to the UPF0754 family
Aba7804_00610	COG2259	Doxx family
Aba7804_00615	COG0586	Pfam SNARE associated Golgi protein
Aba7804_00630	COG1192	Involved in chromosome partitioning
Aba7804_00640	COG0271	Belongs to the BolA IbaG family
Aba7804_00680	COG0300	oxidoreductase activity
Aba7804_00680	COG0318	PFAM AMP-dependent synthetase and ligase
Aba7804_00680	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Aba7804_00680	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7804_00680	COG3321	synthase
Aba7804_00685	COG1960	acyl-CoA dehydrogenase activity
Aba7804_00695	COG2197	response regulator
Aba7804_00705	COG3916	Acyl-homoserine-lactone synthase
Aba7804_00710	COG0477	Major facilitator Superfamily
Aba7804_00715	COG1024	Enoyl-CoA hydratase
Aba7804_00720	COG1024	Enoyl-CoA hydratase
Aba7804_00725	COG1960	acyl-CoA dehydrogenase activity
Aba7804_00730	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Aba7804_00750	COG1113	amino acid transport
Aba7804_00755	COG1113	amino acid transport
Aba7804_00760	COG0251	oxidation-reduction process
Aba7804_00775	COG1522	sequence-specific DNA binding
Aba7804_00800	COG0564	pseudouridine synthase activity
Aba7804_00900	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
Aba7804_00915	COG1802	Transcriptional regulator
Aba7804_00930	COG0277	FAD linked oxidase domain protein
Aba7804_00940	COG2186	Transcriptional regulator
Aba7804_00950	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Aba7804_00955	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Aba7804_00970	COG1210	Utp--glucose-1-phosphate uridylyltransferase
Aba7804_00975	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Aba7804_01000	COG2244	polysaccharide biosynthetic process
Aba7804_01005	COG1083	cytidylyl-transferase
Aba7804_01010	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Aba7804_01020	COG2089	acid synthase
Aba7804_01025	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
Aba7804_01030	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Aba7804_01040	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
Aba7804_01045	COG1596	polysaccharide export
Aba7804_01070	COG0728	peptidoglycan biosynthetic process
Aba7804_01075	COG3023	N-Acetylmuramoyl-L-alanine amidase
Aba7804_01135	COG0546	phosphoglycolate phosphatase activity
Aba7804_01140	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7804_01160	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Aba7804_01165	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Aba7804_01170	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Aba7804_01175	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Aba7804_01180	COG1116	anion transmembrane transporter activity
Aba7804_01185	COG1309	transcriptional regulator
Aba7804_01190	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
Aba7804_01200	COG0196	riboflavin kinase activity
Aba7804_01205	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
Aba7804_01215	COG1047	Peptidyl-prolyl cis-trans
Aba7804_01310	COG2951	lytic endotransglycosylase activity
Aba7804_01315	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
Aba7804_01335	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Aba7804_01345	COG0671	phosphoesterase, PA-phosphatase related
Aba7804_01350	COG0861	Integral membrane protein TerC family
Aba7804_01360	COG0754	glutathionylspermidine amidase activity
Aba7804_01370	COG0402	S-adenosylhomocysteine deaminase activity
Aba7804_01385	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Aba7804_01390	COG1230	cation diffusion facilitator family transporter
Aba7804_01405	COG0706	membrane insertase activity
Aba7804_01420	COG0230	Belongs to the bacterial ribosomal protein bL34 family
Aba7804_01430	COG0592	DNA-directed DNA polymerase activity
Aba7804_01440	COG0187	DNA topoisomerase II activity
Aba7804_01450	COG0586	Pfam SNARE associated Golgi protein
Aba7804_01455	COG0488	(ABC) transporter
Aba7804_01480	COG0596	Alpha beta hydrolase
Aba7804_01485	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
Aba7804_01490	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
Aba7804_01535	COG0733	neurotransmitter:sodium symporter activity
Aba7804_01570	COG0583	DNA-binding transcription factor activity
Aba7804_01575	COG2233	PERMEase
Aba7804_01590	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aba7804_01625	COG2814	Major facilitator Superfamily
Aba7804_01630	COG0656	L-ascorbic acid biosynthetic process
Aba7804_01635	COG0583	DNA-binding transcription factor activity
Aba7804_01650	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Aba7804_01655	COG1064	alcohol dehydrogenase
Aba7804_01660	COG2818	Glycosylase
Aba7804_01675	COG1194	a g-specific adenine glycosylase
Aba7804_01695	COG2983	Belongs to the UPF0260 family
Aba7804_01700	COG2133	pyrroloquinoline quinone binding
Aba7804_01705	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
Aba7804_01710	COG2116	formate transmembrane transporter activity
Aba7804_01730	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Aba7804_01735	COG1335	isochorismatase
Aba7804_01740	COG0385	Bile acid
Aba7804_01745	COG0534	Mate efflux family protein
Aba7804_01750	COG1683	Conserved Protein
Aba7804_01770	COG0625	glutathione transferase activity
Aba7804_01780	COG1113	amino acid transport
Aba7804_01790	COG0523	cobalamin synthesis protein
Aba7804_01800	COG2188	Transcriptional regulator
Aba7804_01830	COG0010	Belongs to the arginase family
Aba7804_01840	COG0546	phosphoglycolate phosphatase activity
Aba7804_01845	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
Aba7804_01850	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Aba7804_01860	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
Aba7804_01865	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
Aba7804_01955	COG0534	Mate efflux family protein
Aba7804_01960	COG0436	Aminotransferase
Aba7804_01965	COG2733	membrane
Aba7804_01980	COG2918	glutathione biosynthetic process
Aba7804_01990	COG3501	Rhs element vgr protein
Aba7804_01995	COG1388	LysM domain
Aba7804_01995	COG3409	Peptidoglycan-binding domain 1 protein
Aba7804_01995	COG5632	N-Acetylmuramoyl-L-alanine amidase
Aba7804_02040	COG3150	esterase
Aba7804_02050	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7804_02055	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
Aba7804_02065	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aba7804_02075	COG2233	PERMEase
Aba7804_02080	COG2351	hydroxyisourate hydrolase activity
Aba7804_02115	COG3706	GGDEF domain
Aba7804_02130	COG1393	Belongs to the ArsC family
Aba7804_02135	COG0708	Exodeoxyribonuclease III
Aba7804_02165	COG0189	ligase activity
Aba7804_02185	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
Aba7804_02195	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
Aba7804_02210	COG4942	peptidase
Aba7804_02220	COG0508	dehydrogenase complex catalyzes the overall conversion of
Aba7804_02230	COG2119	membrane
Aba7804_02235	COG4774	siderophore transport
Aba7804_02240	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba7804_02240	COG0426	domain, Protein
Aba7804_02265	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Aba7804_02290	COG1902	pentaerythritol trinitrate reductase activity
Aba7804_02305	COG0668	transmembrane transport
Aba7804_02315	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Aba7804_02320	COG1335	isochorismatase
Aba7804_02325	COG1522	sequence-specific DNA binding
Aba7804_02350	COG2198	Histidine kinase
Aba7804_02350	COG2205	protein histidine kinase activity
Aba7804_02350	COG0784	Response regulator, receiver
Aba7804_02355	COG3162	membrane
Aba7804_02360	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Aba7804_02370	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Aba7804_02380	COG3706	GGDEF domain
Aba7804_02390	COG1309	transcriptional regulator
Aba7804_02410	COG0351	phosphomethylpyrimidine kinase
Aba7804_02410	COG0352	thiamine-phosphate diphosphorylase activity
Aba7804_02410	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
Aba7804_02420	COG2814	Major facilitator Superfamily
Aba7804_02435	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
Aba7804_02445	COG1113	amino acid transport
Aba7804_02455	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Aba7804_02460	COG1012	belongs to the aldehyde dehydrogenase family
Aba7804_02470	COG1335	isochorismatase
Aba7804_02500	COG2814	Major facilitator Superfamily
Aba7804_02505	COG0583	DNA-binding transcription factor activity
Aba7804_02525	COG0667	Aldo Keto reductase
Aba7804_02550	COG1733	regulation of RNA biosynthetic process
Aba7804_02580	COG1733	regulation of RNA biosynthetic process
Aba7804_02590	COG2249	NAD(P)H dehydrogenase (quinone) activity
Aba7804_02660	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
Aba7804_02675	COG2329	Antibiotic biosynthesis monooxygenase
Aba7804_02710	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
Aba7804_02740	COG0427	acetyl-CoA hydrolase
Aba7804_02755	COG0745	RESPONSE REGULATOR receiver
Aba7804_02765	COG0659	secondary active sulfate transmembrane transporter activity
Aba7804_02770	COG4221	oxidoreductase activity
Aba7804_02780	COG0488	(ABC) transporter
Aba7804_02845	COG0833	amino acid
Aba7804_02890	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
Aba7804_02895	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
Aba7804_02910	COG2226	methyltransferase
Aba7804_02960	COG0067	glutamate synthase
Aba7804_02960	COG0069	glutamate synthase activity
Aba7804_02960	COG0070	glutamate synthase
Aba7804_02965	COG0493	'glutamate synthase
Aba7804_02975	COG1704	LemA family
Aba7804_02980	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
Aba7804_02995	COG3307	-O-antigen
Aba7804_03015	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Aba7804_03025	COG0194	GDP metabolic process
Aba7804_03075	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
Aba7804_03095	COG5380	lipid catabolic process
Aba7804_03100	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
Aba7804_03125	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Aba7804_03130	COG0277	FAD linked oxidase domain protein
Aba7804_03140	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
Aba7804_03145	COG2249	NAD(P)H dehydrogenase (quinone) activity
Aba7804_03160	COG1289	transmembrane transporter activity
Aba7804_03170	COG0628	permease
Aba7804_03175	COG1192	Involved in chromosome partitioning
Aba7804_03205	COG0833	amino acid
Aba7804_03210	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Aba7804_03215	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Aba7804_03225	COG1012	belongs to the aldehyde dehydrogenase family
Aba7804_03265	COG0583	DNA-binding transcription factor activity
Aba7804_03285	COG1106	Psort location Cytoplasmic, score
Aba7804_03320	COG0517	IMP dehydrogenase activity
Aba7804_03325	COG1983	PspC domain protein
Aba7804_03335	COG1960	acyl-CoA dehydrogenase activity
Aba7804_03350	COG0408	coproporphyrinogen oxidase activity
Aba7804_03370	COG0513	Belongs to the DEAD box helicase family
Aba7804_03380	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Aba7804_03390	COG2854	intermembrane phospholipid transfer
Aba7804_03400	COG0598	Magnesium transport protein CorA
Aba7804_03410	COG0494	nUDIX hydrolase
Aba7804_03415	COG1040	competence protein
Aba7804_03420	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
Aba7804_03440	COG1946	Acyl-CoA thioesterase
Aba7804_03445	COG1301	dicarboxylic acid transport
Aba7804_03460	COG1959	2 iron, 2 sulfur cluster binding
Aba7804_03465	COG1017	nitric oxide dioxygenase activity
Aba7804_03465	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Aba7804_03470	COG0433	COG0433 Predicted ATPase
Aba7804_03475	COG0626	cystathionine gamma-synthase activity
Aba7804_03595	COG0257	Belongs to the bacterial ribosomal protein bL36 family
Aba7804_03605	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
Aba7804_03635	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
Aba7804_03665	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
Aba7804_03670	COG0339	signal peptide processing
Aba7804_03675	COG0557	exoribonuclease II activity
Aba7804_03720	COG0179	Fumarylacetoacetate (FAA) hydrolase
Aba7804_03725	COG2169	Transcriptional regulator
Aba7804_03730	COG0697	spore germination
Aba7804_03735	COG1295	ribonuclease BN
Aba7804_03770	COG1702	phosphate starvation-inducible protein PhoH
Aba7804_03780	COG1196	nuclear chromosome segregation
Aba7804_03780	COG0741	lytic transglycosylase activity
Aba7804_03780	COG0739	heme binding
Aba7804_03810	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
Aba7804_03815	COG1183	phosphatidylcholine synthase activity
Aba7804_03860	COG1960	acyl-CoA dehydrogenase activity
Aba7804_03865	COG1309	transcriptional regulator
Aba7804_03880	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Aba7804_03885	COG1960	acyl-CoA dehydrogenase activity
Aba7804_03905	COG2969	positive regulation of protein catabolic process
Aba7804_03915	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Aba7804_03925	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
Aba7804_03930	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Aba7804_03935	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
Aba7804_03955	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
Aba7804_03965	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Aba7804_03970	COG1408	metallophosphoesterase
Aba7804_03980	COG2199	diguanylate cyclase activity
Aba7804_04025	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Aba7804_04025	COG3453	Protein conserved in bacteria
Aba7804_04040	COG1607	acyl-coa hydrolase
Aba7804_04070	COG2350	Protein conserved in bacteria
Aba7804_04080	COG0613	PHP domain protein
Aba7804_04085	COG3781	membrane
Aba7804_04095	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
Aba7804_04100	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Aba7804_04110	COG1862	Preprotein translocase
Aba7804_04160	COG0726	polysaccharide deacetylase
Aba7804_04165	COG0438	transferase activity, transferring glycosyl groups
Aba7804_04185	COG0438	transferase activity, transferring glycosyl groups
Aba7804_04190	COG1215	transferase activity, transferring glycosyl groups
Aba7804_04195	COG0438	transferase activity, transferring glycosyl groups
Aba7804_04235	COG3223	Belongs to the PsiE family
Aba7804_04240	COG1960	acyl-CoA dehydrogenase activity
Aba7804_04245	COG1960	acyl-CoA dehydrogenase activity
Aba7804_04255	COG2205	protein histidine kinase activity
Aba7804_04260	COG0745	RESPONSE REGULATOR receiver
Aba7804_04265	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
Aba7804_04285	COG2096	Adenosyltransferase
Aba7804_04300	COG0133	tryptophan synthase activity
Aba7804_04335	COG0285	dihydrofolate synthase activity
Aba7804_04355	COG0450	alkyl hydroperoxide reductase
Aba7804_04370	COG0477	Major facilitator Superfamily
Aba7804_04375	COG1272	protein, Hemolysin III
Aba7804_04385	COG2153	protein acetylation
Aba7804_04405	COG0183	Belongs to the thiolase family
Aba7804_04410	COG2207	Transcriptional regulator
Aba7804_04430	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Aba7804_04450	COG0183	Belongs to the thiolase family
Aba7804_04460	COG2885	chlorophyll binding
Aba7804_04460	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
Aba7804_04470	COG1690	Belongs to the RtcB family
Aba7804_04475	COG0833	amino acid
Aba7804_04485	COG2233	PERMEase
Aba7804_04515	COG2094	Belongs to the DNA glycosylase MPG family
Aba7804_04520	COG4772	TonB-dependent receptor
Aba7804_04525	COG1902	pentaerythritol trinitrate reductase activity
Aba7804_04540	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Aba7804_04545	COG0354	folic acid binding
Aba7804_04555	COG3189	MarR family transcriptional regulator
Aba7804_04560	COG2824	Alkylphosphonate utilization operon protein PhnA
Aba7804_04565	COG3422	double-strand break repair
Aba7804_04605	COG0840	transmembrane signaling receptor activity
Aba7804_04625	COG5510	response to toxic substance
Aba7804_04635	COG2832	Protein of unknown function (DUF454)
Aba7804_04640	COG1376	ErfK ybiS ycfS ynhG family protein
Aba7804_04690	COG1289	transmembrane transporter activity
Aba7804_04695	COG2814	Major facilitator Superfamily
Aba7804_04715	COG1115	amino acid carrier protein
Aba7804_04720	COG1752	Esterase of the alpha-beta hydrolase superfamily
Aba7804_04725	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Aba7804_04730	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
Aba7804_04735	COG3590	peptidase
Aba7804_04760	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Aba7804_04770	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Aba7804_04775	COG1077	Cell shape determining protein MreB Mrl
Aba7804_04780	COG1792	Involved in formation and maintenance of cell shape
Aba7804_04785	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
Aba7804_04790	COG0424	maF-like protein
Aba7804_04795	COG1530	ribonuclease E activity
Aba7804_04805	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Aba7804_04825	COG2249	NAD(P)H dehydrogenase (quinone) activity
Aba7804_04850	COG2207	Transcriptional regulator
Aba7804_04870	COG1113	amino acid transport
Aba7804_04875	COG2828	Protein conserved in bacteria
Aba7804_04880	COG0142	geranyltranstransferase activity
Aba7804_04885	COG2315	Protein conserved in bacteria
Aba7804_04900	COG1752	Esterase of the alpha-beta hydrolase superfamily
Aba7804_04960	COG0776	regulation of translation
Aba7804_04985	COG3267	Type II secretory pathway component ExeA
Aba7804_04985	COG3409	Peptidoglycan-binding domain 1 protein
Aba7804_05010	COG0681	Belongs to the peptidase S26 family
Aba7804_05065	COG2369	cell adhesion
Aba7804_05085	COG4397	Mu-like prophage major head subunit gpT
Aba7804_05180	COG2826	transposase and inactivated derivatives, IS30 family
Aba7804_05185	COG2194	sulfuric ester hydrolase activity
Aba7804_05190	COG0745	RESPONSE REGULATOR receiver
Aba7804_05195	COG0642	Histidine kinase
Aba7804_05205	COG0004	ammonium transporteR
Aba7804_05215	COG0583	DNA-binding transcription factor activity
Aba7804_05235	COG0525	valine-tRNA ligase activity
Aba7804_05245	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7804_05255	COG0393	Putative heavy-metal-binding
Aba7804_05260	COG0393	Putative heavy-metal-binding
Aba7804_05265	COG1538	Outer membrane efflux protein
Aba7804_05275	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aba7804_05280	COG0671	phosphoesterase, PA-phosphatase related
Aba7804_05310	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
Aba7804_05325	COG1648	precorrin-2 dehydrogenase activity
Aba7804_05325	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
Aba7804_05330	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
Aba7804_05335	COG1733	regulation of RNA biosynthetic process
Aba7804_05345	COG0531	amino acid
Aba7804_05360	COG0321	lipoyl(octanoyl) transferase activity
Aba7804_05365	COG2921	Belongs to the UPF0250 family
Aba7804_05400	COG2009	succinate dehydrogenase
Aba7804_05405	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
Aba7804_05410	COG1053	succinate dehydrogenase
Aba7804_05415	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
Aba7804_05440	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Aba7804_05460	COG2354	Protein conserved in bacteria
Aba7804_05465	COG2321	neutral zinc metallopeptidase
Aba7804_05500	COG2843	Capsule synthesis protein
Aba7804_05515	COG0589	response to stress
Aba7804_05535	COG0505	Belongs to the CarA family
Aba7804_05565	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Aba7804_05570	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
Aba7804_05620	COG0477	Major facilitator Superfamily
Aba7804_05625	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
Aba7804_05645	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
Aba7804_05670	COG0584	glycerophosphoryl diester phosphodiesterase
Aba7804_05690	COG0741	lytic transglycosylase activity
Aba7804_05715	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
Aba7804_05735	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Aba7804_05745	COG3811	Belongs to the UPF0386 family
Aba7804_05780	COG0778	Nitroreductase
Aba7804_05795	COG1929	Belongs to the glycerate kinase type-1 family
Aba7804_05800	COG0243	molybdopterin cofactor binding
Aba7804_05805	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
Aba7804_05810	COG3339	Conserved Protein
Aba7804_05820	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
Aba7804_05835	COG1113	amino acid transport
Aba7804_05845	COG0019	diaminopimelate decarboxylase activity
Aba7804_05855	COG1280	lysine exporter protein (LysE YggA)
Aba7804_05860	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
Aba7804_05890	COG0463	Glycosyl transferase, family 2
Aba7804_05910	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aba7804_05940	COG4591	ABC-type transport system involved in lipoprotein release permease component
Aba7804_05945	COG1136	(ABC) transporter
Aba7804_05950	COG2333	competence protein COMEC
Aba7804_05950	COG0658	competence protein
Aba7804_05960	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Aba7804_05960	COG0616	signal peptide processing
Aba7804_05965	COG0596	Alpha beta hydrolase
Aba7804_05970	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
Aba7804_05980	COG0628	permease
Aba7804_06025	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Aba7804_06045	COG0823	Involved in the tonB-independent uptake of proteins
Aba7804_06065	COG0824	Thioesterase
Aba7804_06070	COG1473	amidohydrolase
Aba7804_06090	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Aba7804_06090	COG0047	phosphoribosylformylglycinamidine synthase activity
Aba7804_06095	COG2814	Major facilitator Superfamily
Aba7804_06100	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
Aba7804_06105	COG1024	Enoyl-CoA hydratase
Aba7804_06110	COG1051	belongs to the nudix hydrolase family
Aba7804_06110	COG1056	cytidyltransferase-related domain
Aba7804_06120	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Aba7804_06135	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
Aba7804_06150	COG4625	pathogenesis
Aba7804_06155	COG0583	DNA-binding transcription factor activity
Aba7804_06160	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
Aba7804_06165	COG4208	sulfate ABC transporter
Aba7804_06170	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
Aba7804_06180	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
Aba7804_06185	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
Aba7804_06190	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
Aba7804_06210	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Aba7804_06225	COG0681	Belongs to the peptidase S26 family
Aba7804_06240	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
Aba7804_06250	COG1381	Involved in DNA repair and RecF pathway recombination
Aba7804_06255	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
Aba7804_06265	COG4221	oxidoreductase activity
Aba7804_06315	COG0556	nucleotide-excision repair
Aba7804_06370	COG2070	2-Nitropropane dioxygenase
Aba7804_06405	COG1215	transferase activity, transferring glycosyl groups
Aba7804_06420	COG0415	Belongs to the DNA photolyase family
Aba7804_06430	COG1252	NADH dehydrogenase
Aba7804_06435	COG1686	Belongs to the peptidase S11 family
Aba7804_06450	COG1187	pseudouridine synthase activity
Aba7804_06475	COG0477	Major facilitator Superfamily
Aba7804_06480	COG0583	DNA-binding transcription factor activity
Aba7804_06495	COG0612	Peptidase, M16
Aba7804_06550	COG0352	thiamine-phosphate diphosphorylase activity
Aba7804_06585	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Aba7804_06610	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Aba7804_06615	COG0076	glutamate decarboxylase activity
Aba7804_06625	COG1522	sequence-specific DNA binding
Aba7804_06630	COG3961	Belongs to the TPP enzyme family
Aba7804_06635	COG1113	amino acid transport
Aba7804_06640	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
Aba7804_06645	COG0573	inorganic phosphate transmembrane transporter activity
Aba7804_06655	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
Aba7804_06660	COG0616	signal peptide processing
Aba7804_06675	COG2826	transposase and inactivated derivatives, IS30 family
Aba7804_06705	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
Aba7804_06710	COG1686	Belongs to the peptidase S11 family
Aba7804_06735	COG0583	DNA-binding transcription factor activity
Aba7804_06740	COG1067	ATP-dependent peptidase activity
Aba7804_06745	COG2211	Major facilitator Superfamily
Aba7804_06765	COG4943	cyclic-guanylate-specific phosphodiesterase activity
Aba7804_06790	COG2879	small protein
Aba7804_06805	COG2826	transposase and inactivated derivatives, IS30 family
Aba7804_06815	COG2826	transposase and inactivated derivatives, IS30 family
Aba7804_06820	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
Aba7804_06835	COG1741	Belongs to the pirin family
Aba7804_06845	COG2964	Protein conserved in bacteria
Aba7804_06860	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Aba7804_06865	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Aba7804_06870	COG4605	iron ion homeostasis
Aba7804_06875	COG4604	ABC transporter, ATP-binding protein
Aba7804_06880	COG4607	ABC-type enterochelin transport system periplasmic component
Aba7804_06885	COG4774	siderophore transport
Aba7804_06895	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Aba7804_06900	COG1021	2,3-dihydroxybenzoate-AMP ligase
Aba7804_06905	COG3433	isochorismatase activity
Aba7804_06905	COG1535	isochorismatase
Aba7804_06920	COG1132	(ABC) transporter
Aba7804_06925	COG5265	(ABC) transporter
Aba7804_06930	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
Aba7804_06940	COG1169	isochorismate synthase
Aba7804_06955	COG3739	integral membrane protein
Aba7804_06990	COG1529	Aldehyde oxidase and xanthine dehydrogenase
Aba7804_07000	COG2840	Smr protein MutS2
Aba7804_07020	COG0308	aminopeptidase N
Aba7804_07025	COG0512	Glutamine amidotransferase of anthranilate synthase
Aba7804_07205	COG5410	chromosome segregation
Aba7804_07315	COG1598	PFAM Uncharacterised protein family UPF0150
Aba7804_07390	COG0582	viral genome integration into host DNA
Aba7804_07400	COG3104	oligopeptide transport
Aba7804_07415	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
Aba7804_07450	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
Aba7804_07455	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
Aba7804_07460	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Aba7804_07480	COG1385	rRNA (uridine-N3-)-methyltransferase activity
Aba7804_07485	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
Aba7804_07490	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
Aba7804_07505	COG1960	acyl-CoA dehydrogenase activity
Aba7804_07510	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Aba7804_07515	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Aba7804_07525	COG2223	nitrite transmembrane transporter activity
Aba7804_07535	COG0024	Methionine aminopeptidase
Aba7804_07540	COG0052	Belongs to the universal ribosomal protein uS2 family
Aba7804_07555	COG2207	Transcriptional regulator
Aba7804_07580	COG2951	lytic endotransglycosylase activity
Aba7804_07585	COG0772	Belongs to the SEDS family
Aba7804_07600	COG0842	Transport permease protein
Aba7804_07605	COG1131	(ABC) transporter
Aba7804_07640	COG1538	Outer membrane efflux protein
Aba7804_07650	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aba7804_07665	COG4215	(ABC) transporter
Aba7804_07670	COG4160	amino acid transport
Aba7804_07675	COG4598	ABC transporter
Aba7804_07685	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Aba7804_07695	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Aba7804_07710	COG1720	tRNA m6t6A37 methyltransferase activity
Aba7804_07730	COG0745	RESPONSE REGULATOR receiver
Aba7804_07735	COG0642	Histidine kinase
Aba7804_07745	COG0494	nUDIX hydrolase
Aba7804_07755	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
Aba7804_07760	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
Aba7804_07765	COG3139	Protein of unknown function (DUF1315)
Aba7804_07770	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Aba7804_07780	COG1301	dicarboxylic acid transport
Aba7804_07785	COG1960	acyl-CoA dehydrogenase activity
Aba7804_07790	COG2819	hydrolase of the alpha beta superfamily
Aba7804_07800	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
Aba7804_07810	COG2195	Cleaves the N-terminal amino acid of tripeptides
Aba7804_07830	COG1690	Belongs to the RtcB family
Aba7804_07835	COG1234	tRNA 3'-trailer cleavage
Aba7804_07840	COG4650	regulator
Aba7804_07870	COG2363	Small membrane protein
Aba7804_07890	COG0513	Belongs to the DEAD box helicase family
Aba7804_07900	COG0778	Nitroreductase
Aba7804_07930	COG1286	toxin biosynthetic process
Aba7804_07955	COG4783	chaperone-mediated protein folding
Aba7804_07960	COG1610	YqeY-like protein
Aba7804_07965	COG0828	Belongs to the bacterial ribosomal protein bS21 family
Aba7804_07990	COG2815	serine threonine protein kinase
Aba7804_07990	COG0515	serine threonine protein kinase
Aba7804_08020	COG3210	domain, Protein
Aba7804_08020	COG3210	domain, Protein
Aba7804_08095	COG2226	methyltransferase
Aba7804_08105	COG3111	PFAM Bacterial OB fold (BOF) protein
Aba7804_08130	COG3243	poly(R)-hydroxyalkanoic acid synthase
Aba7804_08135	COG0786	glutamate:sodium symporter activity
Aba7804_08145	COG2186	Transcriptional regulator
Aba7804_08195	COG0477	Major facilitator Superfamily
Aba7804_08220	COG2995	paraquat-inducible protein a
Aba7804_08225	COG3008	intermembrane lipid transfer
Aba7804_08225	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
Aba7804_08235	COG2351	hydroxyisourate hydrolase activity
Aba7804_08275	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
Aba7804_08285	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
Aba7804_08290	COG0642	Histidine kinase
Aba7804_08295	COG0745	RESPONSE REGULATOR receiver
Aba7804_08315	COG1794	racemase activity, acting on amino acids and derivatives
Aba7804_08335	COG1309	transcriptional regulator
Aba7804_08350	COG2814	Major facilitator Superfamily
Aba7804_08375	COG1301	dicarboxylic acid transport
Aba7804_08385	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Aba7804_08390	COG2011	ABC-type metal ion transport system permease component
Aba7804_08395	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
Aba7804_08400	COG1464	Belongs to the NlpA lipoprotein family
Aba7804_08405	COG0151	Belongs to the GarS family
Aba7804_08410	COG0138	bifunctional purine biosynthesis protein purh
Aba7804_08415	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
Aba7804_08445	COG2308	Evidence 4 Homologs of previously reported genes of
Aba7804_08455	COG1305	Transglutaminase-like
Aba7804_08465	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Aba7804_08470	COG0305	Participates in initiation and elongation during chromosome replication
Aba7804_08495	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
Aba7804_08505	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
Aba7804_08510	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
Aba7804_08535	COG1649	PFAM Uncharacterised BCR, COG1649
Aba7804_08535	COG0726	polysaccharide deacetylase
Aba7804_08540	COG1215	transferase activity, transferring glycosyl groups
Aba7804_08545	COG3658	cytochrome
Aba7804_08555	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Aba7804_08575	COG0583	DNA-binding transcription factor activity
Aba7804_08605	COG1960	acyl-CoA dehydrogenase activity
Aba7804_08610	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Aba7804_08615	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba7804_08640	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
Aba7804_08645	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
Aba7804_08655	COG2205	protein histidine kinase activity
Aba7804_08660	COG0745	RESPONSE REGULATOR receiver
Aba7804_08665	COG0174	glutamine synthetase
Aba7804_08685	COG0729	surface antigen
Aba7804_08715	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Aba7804_08735	COG0583	DNA-binding transcription factor activity
Aba7804_08770	COG0802	atpase or kinase
Aba7804_08775	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
Aba7804_08785	COG1923	regulation of RNA biosynthetic process
Aba7804_08790	COG0697	spore germination
Aba7804_08820	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Aba7804_08820	COG0519	Catalyzes the synthesis of GMP from XMP
Aba7804_08825	COG4302	ethanolamine ammonia-lyase activity
Aba7804_08835	COG0531	amino acid
Aba7804_08855	COG1454	alcohol dehydrogenase
Aba7804_08860	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Aba7804_08870	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
Aba7804_08890	COG0308	aminopeptidase N
Aba7804_08910	COG1605	Chorismate mutase
Aba7804_08935	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
Aba7804_08935	COG2885	chlorophyll binding
Aba7804_08955	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
Aba7804_08955	COG2885	chlorophyll binding
Aba7804_08975	COG1538	Outer membrane efflux protein
Aba7804_09010	COG1234	tRNA 3'-trailer cleavage
Aba7804_09015	COG2271	Major facilitator Superfamily
Aba7804_09025	COG3971	2-oxopent-4-enoate hydratase activity
Aba7804_09030	COG4569	acetaldehyde dehydrogenase (acetylating) activity
Aba7804_09050	COG0583	DNA-binding transcription factor activity
Aba7804_09055	COG4638	Rieske (2fe-2S)
Aba7804_09060	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
Aba7804_09070	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7804_09075	COG3384	dioxygenase
Aba7804_09080	COG0446	pyridine nucleotide-disulphide oxidoreductase
Aba7804_09085	COG2814	Major facilitator Superfamily
Aba7804_09090	COG2814	Major facilitator Superfamily
Aba7804_09095	COG0583	DNA-binding transcription factor activity
Aba7804_09115	COG2826	transposase and inactivated derivatives, IS30 family
Aba7804_09145	COG0668	transmembrane transport
Aba7804_09200	COG0488	(ABC) transporter
Aba7804_09205	COG0589	response to stress
Aba7804_09225	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
Aba7804_09235	COG3135	benzoate transporter
Aba7804_09255	COG0583	DNA-binding transcription factor activity
Aba7804_09265	COG0183	Belongs to the thiolase family
Aba7804_09305	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
Aba7804_09315	COG0824	Thioesterase
Aba7804_09320	COG1454	alcohol dehydrogenase
Aba7804_09330	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Aba7804_09365	COG2826	transposase and inactivated derivatives, IS30 family
Aba7804_09375	COG2814	Major facilitator Superfamily
Aba7804_09390	COG0511	ligase activity, forming carbon-carbon bonds
Aba7804_09405	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Aba7804_09405	COG1116	anion transmembrane transporter activity
Aba7804_09410	COG0745	RESPONSE REGULATOR receiver
Aba7804_09420	COG2146	nitrite reductase [NAD(P)H] activity
Aba7804_09420	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Aba7804_09430	COG0243	molybdopterin cofactor binding
Aba7804_09440	COG0243	molybdopterin cofactor binding
Aba7804_09460	COG0315	cyclic pyranopterin monophosphate synthase activity
Aba7804_09460	COG0521	Mo-molybdopterin cofactor biosynthetic process
Aba7804_09465	COG0303	'Molybdopterin
Aba7804_09475	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Aba7804_09480	COG0697	spore germination
Aba7804_09500	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
Aba7804_09505	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Aba7804_09565	COG2204	response regulator
Aba7804_09570	COG3852	Histidine kinase
Aba7804_09595	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
Aba7804_09600	COG0575	Belongs to the CDS family
Aba7804_09635	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Aba7804_09650	COG2137	regulation of response to DNA damage stimulus
Aba7804_09660	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
Aba7804_09665	COG1011	Hydrolase
Aba7804_09710	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Aba7804_09745	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Aba7804_09795	COG1484	DNA-dependent DNA replication
Aba7804_09870	COG3755	Protein conserved in bacteria
Aba7804_10045	COG0592	DNA-directed DNA polymerase activity
Aba7804_10110	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Aba7804_10150	COG1522	sequence-specific DNA binding
Aba7804_10160	COG1113	amino acid transport
Aba7804_10180	COG0659	secondary active sulfate transmembrane transporter activity
Aba7804_10185	COG2135	peptidase activity
Aba7804_10200	COG5001	Diguanylate cyclase
Aba7804_10200	COG3300	MHYT domain
Aba7804_10215	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Aba7804_10215	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Aba7804_10215	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
Aba7804_10220	COG1105	Belongs to the carbohydrate kinase PfkB family
Aba7804_10225	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
Aba7804_10225	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Aba7804_10255	COG0024	Methionine aminopeptidase
Aba7804_10260	COG0583	DNA-binding transcription factor activity
Aba7804_10270	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
Aba7804_10275	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Aba7804_10280	COG0517	IMP dehydrogenase activity
Aba7804_10280	COG0516	GMP reductase activity
Aba7804_10310	COG0552	protein localization to endoplasmic reticulum
Aba7804_10320	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
Aba7804_10330	COG4890	Cyd operon protein YbgT
Aba7804_10335	COG1294	oxidase, subunit
Aba7804_10360	COG1585	Membrane protein implicated in regulation of membrane protease activity
Aba7804_10370	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Aba7804_10375	COG4774	siderophore transport
Aba7804_10390	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Aba7804_10395	COG0569	domain protein
Aba7804_10400	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Aba7804_10430	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
Aba7804_10435	COG0542	response to heat
Aba7804_10445	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Aba7804_10460	COG1902	pentaerythritol trinitrate reductase activity
Aba7804_10460	COG0446	pyridine nucleotide-disulphide oxidoreductase
Aba7804_10505	COG2323	membrane
Aba7804_10510	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
Aba7804_10520	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Aba7804_10525	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
Aba7804_10530	COG0183	Belongs to the thiolase family
Aba7804_10535	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
Aba7804_10540	COG0596	Alpha beta hydrolase
Aba7804_10545	COG2271	Major facilitator Superfamily
Aba7804_10550	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
Aba7804_10555	COG3485	protocatechuate 3,4-dioxygenase
Aba7804_10560	COG3485	protocatechuate 3,4-dioxygenase
Aba7804_10565	COG0710	3-dehydroquinate dehydratase activity
Aba7804_10575	COG3659	wide pore channel activity
Aba7804_10580	COG4993	Dehydrogenase
Aba7804_10590	COG2391	methyltransferase activity
Aba7804_10605	COG1414	Transcriptional regulator
Aba7804_10610	COG0583	DNA-binding transcription factor activity
Aba7804_10615	COG1960	acyl-CoA dehydrogenase activity
Aba7804_10640	COG2814	Major facilitator Superfamily
Aba7804_10650	COG0154	amidase activity
Aba7804_10670	COG4638	Rieske (2fe-2S)
Aba7804_10680	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7804_10690	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba7804_10700	COG3733	amine oxidase
Aba7804_10710	COG1012	belongs to the aldehyde dehydrogenase family
Aba7804_10715	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Aba7804_10720	COG0183	Belongs to the thiolase family
Aba7804_10725	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
Aba7804_10730	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Aba7804_10740	COG4829	muconolactone delta-isomerase
Aba7804_10745	COG4948	Mandelate Racemase Muconate Lactonizing
Aba7804_10750	COG0583	DNA-binding transcription factor activity
Aba7804_10760	COG2186	Transcriptional regulator
Aba7804_10780	COG1012	belongs to the aldehyde dehydrogenase family
Aba7804_10785	COG3231	kanamycin kinase activity
Aba7804_10800	COG1960	acyl-CoA dehydrogenase activity
Aba7804_10805	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7804_10810	COG3829	transcription factor binding
Aba7804_10825	COG3162	membrane
Aba7804_10840	COG1012	belongs to the aldehyde dehydrogenase family
Aba7804_10855	COG0753	catalase activity
Aba7804_10880	COG1846	Transcriptional regulator
Aba7804_10885	COG0446	pyridine nucleotide-disulphide oxidoreductase
Aba7804_10885	COG1902	pentaerythritol trinitrate reductase activity
Aba7804_10895	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
Aba7804_10925	COG1309	transcriptional regulator
Aba7804_10975	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
Aba7804_10980	COG2259	Doxx family
Aba7804_11050	COG0583	DNA-binding transcription factor activity
Aba7804_11075	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aba7804_11090	COG2271	Major facilitator Superfamily
Aba7804_11100	COG1566	PFAM secretion protein HlyD family protein
Aba7804_11115	COG1012	belongs to the aldehyde dehydrogenase family
Aba7804_11120	COG0129	dihydroxy-acid dehydratase activity
Aba7804_11130	COG0583	DNA-binding transcription factor activity
Aba7804_11135	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Aba7804_11145	COG2084	Dehydrogenase
Aba7804_11150	COG2207	Transcriptional regulator
Aba7804_11165	COG1064	alcohol dehydrogenase
Aba7804_11180	COG1120	ATPase activity
Aba7804_11200	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Aba7804_11250	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
Aba7804_11285	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7804_11310	COG2205	protein histidine kinase activity
Aba7804_11315	COG0745	RESPONSE REGULATOR receiver
Aba7804_11325	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Aba7804_11390	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Aba7804_11395	COG4771	TonB-dependent receptor
Aba7804_11430	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Aba7804_11435	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Aba7804_11440	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Aba7804_11455	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
Aba7804_11470	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Aba7804_11490	COG1132	(ABC) transporter
Aba7804_11495	COG1132	(ABC) transporter
Aba7804_11515	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Aba7804_11520	COG0601	transmembrane transport
Aba7804_11525	COG0747	negative chemotaxis
Aba7804_11550	COG3539	Fimbrial protein
Aba7804_11575	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
Aba7804_11590	COG0753	catalase activity
Aba7804_11605	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Aba7804_11670	COG1535	isochorismatase
Aba7804_11670	COG3433	isochorismatase activity
Aba7804_11675	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7804_11680	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
Aba7804_11685	COG4149	molybdate abc transporter
Aba7804_11690	COG0725	ABC transporter, periplasmic molybdate-binding protein
Aba7804_11700	COG4638	Rieske (2fe-2S)
Aba7804_11705	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
Aba7804_11710	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Aba7804_11710	COG0543	2 iron, 2 sulfur cluster binding
Aba7804_11725	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba7804_11735	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7804_11740	COG0412	Dienelactone hydrolase
Aba7804_11750	COG2207	Transcriptional regulator
Aba7804_11760	COG2610	gluconate transmembrane transporter activity
Aba7804_11770	COG1309	transcriptional regulator
Aba7804_11790	COG0583	DNA-binding transcription factor activity
Aba7804_11805	COG2031	fatty acid transporter
Aba7804_11810	COG0183	Belongs to the thiolase family
Aba7804_11815	COG0583	DNA-binding transcription factor activity
Aba7804_11820	COG0583	DNA-binding transcription factor activity
Aba7804_11835	COG1027	Aspartate ammonia-lyase
Aba7804_11845	COG0477	Major facilitator Superfamily
Aba7804_11870	COG4521	taurine ABC transporter
Aba7804_11895	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
Aba7804_11900	COG1733	regulation of RNA biosynthetic process
Aba7804_11905	COG2207	Transcriptional regulator
Aba7804_11905	COG3708	Transcriptional regulator
Aba7804_11920	COG0730	response to heat
Aba7804_11930	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Aba7804_11930	COG3453	Protein conserved in bacteria
Aba7804_11940	COG3781	membrane
Aba7804_11945	COG1063	alcohol dehydrogenase
Aba7804_11955	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Aba7804_11960	COG0508	dehydrogenase complex catalyzes the overall conversion of
Aba7804_11965	COG0022	dehydrogenase e1 component
Aba7804_11970	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Aba7804_11975	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Aba7804_11990	COG3706	GGDEF domain
Aba7804_12005	COG0133	tryptophan synthase activity
Aba7804_12015	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Aba7804_12050	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
Aba7804_12075	COG2226	methyltransferase
Aba7804_12130	COG0842	Transport permease protein
Aba7804_12135	COG0842	Transport permease protein
Aba7804_12140	COG1131	(ABC) transporter
Aba7804_12155	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Aba7804_12160	COG4773	Receptor
Aba7804_12180	COG0730	response to heat
Aba7804_12185	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Aba7804_12200	COG0406	alpha-ribazole phosphatase activity
Aba7804_12205	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
Aba7804_12255	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
Aba7804_12265	COG4264	IucA IucC family
Aba7804_12270	COG4264	IucA IucC family
Aba7804_12290	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
Aba7804_12305	COG1960	acyl-CoA dehydrogenase activity
Aba7804_12310	COG1960	acyl-CoA dehydrogenase activity
Aba7804_12315	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Aba7804_12320	COG2207	Transcriptional regulator
Aba7804_12325	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Aba7804_12330	COG0776	regulation of translation
Aba7804_12355	COG0822	iron-sulfur transferase activity
Aba7804_12360	COG0316	Belongs to the HesB IscA family
Aba7804_12390	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
Aba7804_12410	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
Aba7804_12415	COG0702	epimerase
Aba7804_12450	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Aba7804_12470	COG4166	transmembrane transport
Aba7804_12505	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
Aba7804_12510	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
Aba7804_12540	COG0776	regulation of translation
Aba7804_12560	COG0590	tRNA wobble adenosine to inosine editing
Aba7804_12590	COG2165	general secretion pathway protein
Aba7804_12605	COG0084	hydrolase, TatD family'
Aba7804_12625	COG1663	tetraacyldisaccharide 4'-kinase activity
Aba7804_12630	COG1132	(ABC) transporter
Aba7804_12640	COG0811	peptide transport
Aba7804_12645	COG1475	DNA binding
Aba7804_12650	COG1192	Involved in chromosome partitioning
Aba7804_12660	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Aba7804_12665	COG3178	'Phosphotransferase
Aba7804_12675	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Aba7804_12680	COG0191	fructose-bisphosphate aldolase activity
Aba7804_12700	COG0424	maF-like protein
Aba7804_12705	COG2850	peptidyl-arginine hydroxylation
Aba7804_12715	COG0640	Transcriptional regulator
Aba7804_12725	COG3619	membrane
Aba7804_12730	COG3122	Protein conserved in bacteria
Aba7804_12735	COG1132	(ABC) transporter
Aba7804_12755	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
Aba7804_12760	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Aba7804_12770	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
Aba7804_12770	COG0506	proline dehydrogenase activity
Aba7804_12770	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
Aba7804_12775	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
Aba7804_12790	COG3698	Phosphodiester glycosidase
Aba7804_12800	COG2353	YceI-like domain
Aba7804_12810	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
Aba7804_12855	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Aba7804_12855	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Aba7804_12880	COG3539	Fimbrial protein
Aba7804_12885	COG3121	Chaperone
Aba7804_12915	COG0697	spore germination
Aba7804_12925	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
Aba7804_12935	COG0583	DNA-binding transcription factor activity
Aba7804_12955	COG1309	transcriptional regulator
Aba7804_12970	COG1522	sequence-specific DNA binding
Aba7804_12980	COG1126	abc transporter atp-binding protein
Aba7804_12985	COG0765	amino acid transport
Aba7804_12990	COG0765	amino acid transport
Aba7804_13020	COG1464	Belongs to the NlpA lipoprotein family
Aba7804_13030	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
Aba7804_13035	COG2011	ABC-type metal ion transport system permease component
Aba7804_13040	COG0012	GTP binding
Aba7804_13065	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
Aba7804_13105	COG0386	Belongs to the glutathione peroxidase family
Aba7804_13115	COG0436	Aminotransferase
Aba7804_13155	COG3634	alkyl hydroperoxide reductase activity
Aba7804_13170	COG0583	DNA-binding transcription factor activity
Aba7804_13175	COG0798	PFAM Bile acid sodium symporter
Aba7804_13180	COG0640	Transcriptional regulator
Aba7804_13195	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
Aba7804_13205	COG0583	DNA-binding transcription factor activity
Aba7804_13215	COG1953	Uracil, thiamine, allantoin
Aba7804_13225	COG2175	clavaminate synthase activity
Aba7804_13230	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Aba7804_13235	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
Aba7804_13240	COG4521	taurine ABC transporter
Aba7804_13250	COG0477	Major facilitator Superfamily
Aba7804_13280	COG1271	oxidase subunit
Aba7804_13285	COG1294	oxidase, subunit
Aba7804_13295	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Aba7804_13315	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
Aba7804_13335	COG3052	prosthetic group binding
Aba7804_13340	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
Aba7804_13350	COG0300	oxidoreductase activity
Aba7804_13375	COG1346	cytolysis
Aba7804_13385	COG0583	DNA-binding transcription factor activity
Aba7804_13390	COG0625	glutathione transferase activity
Aba7804_13395	COG0625	glutathione transferase activity
Aba7804_13400	COG0583	DNA-binding transcription factor activity
Aba7804_13415	COG1045	serine acetyltransferase
Aba7804_13420	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Aba7804_13425	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
Aba7804_13430	COG1280	lysine exporter protein (LysE YggA)
Aba7804_13445	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Aba7804_13450	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Aba7804_13460	COG0765	amino acid transport
Aba7804_13465	COG0765	amino acid transport
Aba7804_13505	COG2205	protein histidine kinase activity
Aba7804_13505	COG0784	Response regulator, receiver
Aba7804_13525	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Aba7804_13545	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7804_13595	COG0583	DNA-binding transcription factor activity
Aba7804_13615	COG0318	PFAM AMP-dependent synthetase and ligase
Aba7804_13625	COG1960	acyl-CoA dehydrogenase activity
Aba7804_13630	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Aba7804_13635	COG1024	Enoyl-CoA hydratase
Aba7804_13650	COG0583	DNA-binding transcription factor activity
Aba7804_13665	COG1960	acyl-CoA dehydrogenase activity
Aba7804_13675	COG2814	Major facilitator Superfamily
Aba7804_13685	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
Aba7804_13690	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Aba7804_13695	COG2814	Major facilitator Superfamily
Aba7804_13700	COG1960	acyl-CoA dehydrogenase activity
Aba7804_13705	COG1024	Enoyl-CoA hydratase
Aba7804_13710	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7804_13720	COG0183	Belongs to the thiolase family
Aba7804_13730	COG2814	Major facilitator Superfamily
Aba7804_13740	COG1024	Enoyl-CoA hydratase
Aba7804_13755	COG1960	acyl-CoA dehydrogenase activity
Aba7804_13760	COG2814	Major facilitator Superfamily
Aba7804_13765	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Aba7804_13770	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
Aba7804_13790	COG1840	ABC-type Fe3 transport system, periplasmic component
Aba7804_13800	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aba7804_13805	COG1414	Transcriptional regulator
Aba7804_13815	COG0583	DNA-binding transcription factor activity
Aba7804_13820	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
Aba7804_13825	COG1012	belongs to the aldehyde dehydrogenase family
Aba7804_13835	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
Aba7804_13850	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Aba7804_13855	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba7804_13860	COG2267	carboxylic ester hydrolase activity
Aba7804_13880	COG3038	cytochrome b561
Aba7804_13885	COG0753	catalase activity
Aba7804_13890	COG2271	Major facilitator Superfamily
Aba7804_13895	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Aba7804_13900	COG1804	L-carnitine dehydratase bile acid-inducible protein F
Aba7804_13915	COG2207	Transcriptional regulator
Aba7804_13935	COG0556	nucleotide-excision repair
Aba7804_13945	COG2050	protein possibly involved in aromatic compounds catabolism
Aba7804_13955	COG3327	negative regulation of DNA-templated transcription, initiation
Aba7804_13960	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
Aba7804_13965	COG0183	Belongs to the thiolase family
Aba7804_13970	COG1250	3-hydroxyacyl-CoA dehydrogenase
Aba7804_13975	COG1024	Enoyl-CoA hydratase
Aba7804_13980	COG1024	Enoyl-CoA hydratase
Aba7804_13985	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Aba7804_13990	COG2151	metal-sulfur cluster biosynthetic enzyme
Aba7804_13995	COG3396	Phenylacetate-CoA oxygenase
Aba7804_14000	COG3460	Phenylacetate-CoA oxygenase
Aba7804_14005	COG3396	Phenylacetate-CoA oxygenase
Aba7804_14010	COG1012	belongs to the aldehyde dehydrogenase family
Aba7804_14010	COG2030	dehydratase
Aba7804_14015	COG1760	l-serine dehydratase
Aba7804_14020	COG0531	amino acid
Aba7804_14025	COG1012	belongs to the aldehyde dehydrogenase family
Aba7804_14050	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Aba7804_14070	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Aba7804_14085	COG0789	Transcriptional regulator
Aba7804_14095	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
Aba7804_14110	COG2807	transmembrane transport
Aba7804_14115	COG0590	tRNA wobble adenosine to inosine editing
Aba7804_14125	COG0583	DNA-binding transcription factor activity
Aba7804_14165	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
Aba7804_14165	COG2885	chlorophyll binding
Aba7804_14275	COG1116	anion transmembrane transporter activity
Aba7804_14280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Aba7804_14290	COG0864	Transcriptional regulator
Aba7804_14300	COG1733	regulation of RNA biosynthetic process
Aba7804_14305	COG2249	NAD(P)H dehydrogenase (quinone) activity
Aba7804_14310	COG0439	Biotin carboxylase
Aba7804_14325	COG1063	alcohol dehydrogenase
Aba7804_14335	COG1309	transcriptional regulator
Aba7804_14350	COG3210	domain, Protein
Aba7804_14355	COG2831	hemolysin activation secretion protein
Aba7804_14360	COG0038	chloride channel
Aba7804_14365	COG4770	biotin carboxylase activity
Aba7804_14385	COG1914	H( )-stimulated, divalent metal cation uptake system
Aba7804_14390	COG0583	DNA-binding transcription factor activity
Aba7804_14410	COG1250	3-hydroxyacyl-CoA dehydrogenase
Aba7804_14430	COG2814	Major facilitator Superfamily
Aba7804_14450	COG0598	Magnesium transport protein CorA
Aba7804_14455	COG1560	Kdo2-lipid A biosynthetic process
Aba7804_14465	COG5006	permease, DMT superfamily
Aba7804_14470	COG1522	sequence-specific DNA binding
Aba7804_14485	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
Aba7804_14525	COG1538	Outer membrane efflux protein
Aba7804_14530	COG1137	ATPase activity
Aba7804_14535	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
Aba7804_14545	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
Aba7804_14610	COG1733	regulation of RNA biosynthetic process
Aba7804_14615	COG2814	Major facilitator Superfamily
Aba7804_14655	COG1278	Cold shock
Aba7804_14660	COG1280	lysine exporter protein (LysE YggA)
Aba7804_14695	COG1570	exodeoxyribonuclease VII activity
Aba7804_14780	COG2871	sodium ion transport
Aba7804_14790	COG0583	DNA-binding transcription factor activity
Aba7804_14800	COG4638	Rieske (2fe-2S)
Aba7804_14810	COG0633	Ferredoxin
Aba7804_14810	COG0543	2 iron, 2 sulfur cluster binding
Aba7804_14815	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7804_14820	COG3135	benzoate transporter
Aba7804_14825	COG2814	Major facilitator Superfamily
Aba7804_14840	COG1643	Atp-dependent helicase
Aba7804_14845	COG0450	alkyl hydroperoxide reductase
Aba7804_14855	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
Aba7804_14865	COG3634	alkyl hydroperoxide reductase activity
Aba7804_14885	COG0220	tRNA (guanine-N7-)-methyltransferase activity
Aba7804_14890	COG0625	glutathione transferase activity
Aba7804_14900	COG2885	chlorophyll binding
Aba7804_14950	COG1765	OsmC-like protein
Aba7804_14965	COG0667	Aldo Keto reductase
Aba7804_14980	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
Aba7804_14990	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Aba7804_15010	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Aba7804_15020	COG3038	cytochrome b561
Aba7804_15025	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
Aba7804_15030	COG2252	PERMEase
Aba7804_15040	COG2072	flavoprotein involved in K transport
Aba7804_15055	COG1741	Belongs to the pirin family
Aba7804_15060	COG1309	transcriptional regulator
Aba7804_15070	COG0300	oxidoreductase activity
Aba7804_15075	COG2072	flavoprotein involved in K transport
Aba7804_15080	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
Aba7804_15085	COG0583	DNA-binding transcription factor activity
Aba7804_15095	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
Aba7804_15145	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Aba7804_15160	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Aba7804_15180	COG1024	Enoyl-CoA hydratase
Aba7804_15185	COG1012	belongs to the aldehyde dehydrogenase family
Aba7804_15195	COG1960	acyl-CoA dehydrogenase activity
Aba7804_15220	COG2186	Transcriptional regulator
Aba7804_15225	COG1012	belongs to the aldehyde dehydrogenase family
Aba7804_15235	COG4948	Mandelate Racemase Muconate Lactonizing
Aba7804_15240	COG2271	Major facilitator Superfamily
Aba7804_15245	COG2721	sulfolactate sulfo-lyase activity
Aba7804_15250	COG0697	spore germination
Aba7804_15265	COG1113	amino acid transport
Aba7804_15285	COG1012	belongs to the aldehyde dehydrogenase family
Aba7804_15305	COG0531	amino acid
Aba7804_15315	COG1113	amino acid transport
Aba7804_15350	COG0183	Belongs to the thiolase family
Aba7804_15355	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
Aba7804_15360	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Aba7804_15375	COG3485	protocatechuate 3,4-dioxygenase
Aba7804_15380	COG1454	alcohol dehydrogenase
Aba7804_15385	COG1012	belongs to the aldehyde dehydrogenase family
Aba7804_15400	COG2814	Major facilitator Superfamily
Aba7804_15405	COG0583	DNA-binding transcription factor activity
Aba7804_15415	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Aba7804_15450	COG0446	pyridine nucleotide-disulphide oxidoreductase
Aba7804_15450	COG1902	pentaerythritol trinitrate reductase activity
Aba7804_15475	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Aba7804_15495	COG4172	Belongs to the ABC transporter superfamily
Aba7804_15505	COG4174	ABC transporter (Permease)
Aba7804_15515	COG1388	LysM domain
Aba7804_15515	COG0741	lytic transglycosylase activity
Aba7804_15515	COG0741	lytic transglycosylase activity
Aba7804_15515	COG1388	LysM domain
Aba7804_15520	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Aba7804_15560	COG0583	DNA-binding transcription factor activity
Aba7804_15565	COG1279	arginine transmembrane transporter activity
Aba7804_15585	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aba7804_15590	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aba7804_15595	COG0006	proline dipeptidase activity
Aba7804_15635	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
Aba7804_15650	COG3384	dioxygenase
Aba7804_15660	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Aba7804_15665	COG2878	Part of a membrane complex involved in electron transport
Aba7804_15670	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Aba7804_15695	COG0768	penicillin binding
Aba7804_15715	COG0830	nickel cation binding
Aba7804_15725	COG0804	urea catabolic process
Aba7804_15765	COG1253	flavin adenine dinucleotide binding
Aba7804_15775	COG2851	Citrate transporter
Aba7804_15825	COG1773	rubredoxin
Aba7804_15830	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Aba7804_15840	COG0583	DNA-binding transcription factor activity
Aba7804_15870	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
Aba7804_15875	COG4181	ATPase activity
Aba7804_15920	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Aba7804_15940	COG0306	phosphate transporter
Aba7804_15950	COG3958	Transketolase
Aba7804_15955	COG3959	Transketolase, thiamine diphosphate binding domain
Aba7804_15960	COG2271	Major facilitator Superfamily
Aba7804_15965	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7804_15970	COG0583	DNA-binding transcription factor activity
Aba7804_15990	COG2223	nitrite transmembrane transporter activity
Aba7804_15995	COG2207	Transcriptional regulator
Aba7804_16000	COG2066	Belongs to the glutaminase family
Aba7804_16005	COG0242	peptide deformylase activity
Aba7804_16025	COG0028	Belongs to the TPP enzyme family
Aba7804_16040	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7804_16045	COG2267	carboxylic ester hydrolase activity
Aba7804_16070	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7804_16090	COG1414	Transcriptional regulator
Aba7804_16105	COG1024	Enoyl-CoA hydratase
Aba7804_16120	COG0726	polysaccharide deacetylase
Aba7804_16120	COG1649	PFAM Uncharacterised BCR, COG1649
Aba7804_16130	COG4681	YaeQ
Aba7804_16140	COG0523	cobalamin synthesis protein
Aba7804_16150	COG1607	acyl-coa hydrolase
Aba7804_16160	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Aba7804_16165	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Aba7804_16170	COG1309	transcriptional regulator
Aba7804_16195	COG2040	homocysteine
Aba7804_16200	COG0531	amino acid
Aba7804_16255	COG1595	DNA-templated transcription, initiation
Aba7804_16265	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Aba7804_16270	COG0477	Major facilitator Superfamily
Aba7804_16350	COG3177	Filamentation induced by cAMP protein fic
Aba7804_16355	COG0629	single-stranded DNA binding
Aba7804_16405	COG0582	viral genome integration into host DNA
Aba7804_16425	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Aba7804_16550	COG2026	Addiction module toxin, RelE StbE family
Aba7804_16755	COG1484	DNA-dependent DNA replication
Aba7804_16850	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Aba7804_16905	COG0405	Gamma-glutamyltransferase
Aba7804_16910	COG2814	Major facilitator Superfamily
Aba7804_16920	COG2050	protein possibly involved in aromatic compounds catabolism
Aba7804_16935	COG1090	epimerase
Aba7804_16955	COG0420	3'-5' exonuclease activity
Aba7804_16980	COG0735	belongs to the Fur family
Aba7804_16985	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Aba7804_17010	COG0121	glutamine amidotransferase
Aba7804_17035	COG0210	DNA helicase
Aba7804_17040	COG2885	chlorophyll binding
Aba7804_17045	COG0204	Acyl-transferase
Aba7804_17060	COG2894	cell division
Aba7804_17080	COG1280	lysine exporter protein (LysE YggA)
Aba7804_17085	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
Aba7804_17085	COG1674	ftsk spoiiie
Aba7804_17090	COG0492	ferredoxin-NADP+ reductase activity
Aba7804_17095	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
Aba7804_17105	COG0456	acetyltransferase
Aba7804_17165	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
Aba7804_17165	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Aba7804_17185	COG1012	belongs to the aldehyde dehydrogenase family
Aba7804_17205	COG0473	3-isopropylmalate dehydrogenase activity
Aba7804_17210	COG0583	DNA-binding transcription factor activity
Aba7804_17230	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Aba7804_17255	COG0564	pseudouridine synthase activity
Aba7804_17265	COG0358	DNA primase activity
Aba7804_17280	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
Aba7804_17310	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Aba7804_17340	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Aba7804_17350	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
Aba7804_17350	COG0351	phosphomethylpyrimidine kinase
Aba7804_17350	COG0352	thiamine-phosphate diphosphorylase activity
Aba7804_17355	COG1652	LysM domain
Aba7804_17380	COG1399	metal-binding, possibly nucleic acid-binding protein
Aba7804_17385	COG3101	peptidyl-lysine hydroxylation
Aba7804_17390	COG0009	L-threonylcarbamoyladenylate synthase
Aba7804_17395	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
Aba7804_17400	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
Aba7804_17415	COG4106	trans-aconitate 2-methyltransferase activity
Aba7804_17430	COG2226	methyltransferase
Aba7804_17430	COG0596	Alpha beta hydrolase
Aba7804_17430	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Aba7804_17435	COG1877	trehalose-phosphatase activity
Aba7804_17440	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
Aba7804_17445	COG2223	nitrite transmembrane transporter activity
Aba7804_17465	COG1196	nuclear chromosome segregation
Aba7804_17475	COG0730	response to heat
Aba7804_17490	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Aba7804_17500	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Aba7804_17555	COG0489	protein tyrosine kinase activity
Aba7804_17565	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Aba7804_17565	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Aba7804_17595	COG2515	1-aminocyclopropane-1-carboxylate deaminase
Aba7804_17600	COG2081	HI0933 family
Aba7804_17610	COG0668	transmembrane transport
Aba7804_17630	COG0583	DNA-binding transcription factor activity
Aba7804_17650	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Aba7804_17655	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Aba7804_17685	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
Aba7804_17720	COG2205	protein histidine kinase activity
Aba7804_17725	COG0745	RESPONSE REGULATOR receiver
Aba7804_17745	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Aba7804_17755	COG0384	phenazine biosynthesis protein PhzF
Aba7804_17775	COG2826	transposase and inactivated derivatives, IS30 family
Aba7804_17785	COG1309	transcriptional regulator
Aba7804_17795	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba7804_17800	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
Aba7804_17810	COG0583	DNA-binding transcription factor activity
Aba7804_17830	COG1473	amidohydrolase
Aba7804_17840	COG0583	DNA-binding transcription factor activity
Aba7804_17860	COG0583	DNA-binding transcription factor activity
Aba7804_17865	COG1053	succinate dehydrogenase
Aba7804_17880	COG1804	L-carnitine dehydratase bile acid-inducible protein F
Aba7804_17885	COG2814	Major facilitator Superfamily
Aba7804_17890	COG1960	acyl-CoA dehydrogenase activity
Aba7804_17895	COG0583	DNA-binding transcription factor activity
Aba7804_17900	COG1063	alcohol dehydrogenase
Aba7804_17915	COG0582	viral genome integration into host DNA
Aba7804_17920	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Aba7804_17945	COG1122	ATPase activity
Aba7804_17975	COG3646	Phage regulatory protein
Aba7804_18105	COG3409	Peptidoglycan-binding domain 1 protein
Aba7804_18105	COG0860	N-Acetylmuramoyl-L-alanine amidase
Aba7804_18150	COG4695	Portal protein
Aba7804_18190	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
Aba7804_18195	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
Aba7804_18200	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Aba7804_18220	COG2132	Multicopper oxidase
Aba7804_18230	COG0561	phosphatase activity
Aba7804_18235	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
Aba7804_18245	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
Aba7804_18260	COG1214	PFAM Peptidase M22, glycoprotease
Aba7804_18315	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
Aba7804_18325	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
Aba7804_18330	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
Aba7804_18335	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
Aba7804_18395	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Aba7804_18405	COG1846	Transcriptional regulator
Aba7804_18410	COG1764	response to oxidative stress
Aba7804_18450	COG0037	tRNA processing
Aba7804_18460	COG0248	Ppx GppA phosphatase
Aba7804_18490	COG0072	phenylalanine-tRNA ligase activity
Aba7804_18515	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
Aba7804_18530	COG1238	metal cluster binding
Aba7804_18535	COG0625	glutathione transferase activity
Aba7804_18555	COG0318	PFAM AMP-dependent synthetase and ligase
Aba7804_18560	COG3028	Belongs to the UPF0307 family
Aba7804_18565	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
Aba7804_18585	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Aba7804_18590	COG0617	tRNA 3'-terminal CCA addition
Aba7804_18595	COG1555	photosystem II stabilization
Aba7804_18600	COG3956	TIGRFAM MazG family protein
Aba7804_18610	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Aba7804_18630	COG0784	Response regulator, receiver
Aba7804_18630	COG2205	protein histidine kinase activity
Aba7804_18630	COG5002	protein histidine kinase activity
Aba7804_18640	COG2084	Dehydrogenase
Aba7804_18645	COG3622	Belongs to the hyi family
Aba7804_18660	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
Aba7804_18665	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
Aba7804_18670	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
Aba7804_18675	COG0697	spore germination
Aba7804_18685	COG2814	Major facilitator Superfamily
Aba7804_18690	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Aba7804_18700	COG0583	DNA-binding transcription factor activity
Aba7804_18725	COG0084	hydrolase, TatD family'
Aba7804_18740	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
Aba7804_18810	COG0440	acetolactate synthase activity
Aba7804_18815	COG0028	Belongs to the TPP enzyme family
Aba7804_18840	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aba7804_18845	COG0577	efflux transmembrane transporter activity
Aba7804_18845	COG1136	(ABC) transporter
Aba7804_18850	COG1538	Outer membrane efflux protein
Aba7804_18865	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
Aba7804_18870	COG1162	GTPase activity
Aba7804_18880	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
Aba7804_18920	COG1426	Protein conserved in bacteria
Aba7804_18955	COG0793	Belongs to the peptidase S41A family
Aba7804_18970	COG2267	carboxylic ester hydrolase activity
Aba7804_18980	COG1012	belongs to the aldehyde dehydrogenase family
Aba7804_18985	COG3265	gluconokinase activity
Aba7804_18995	COG0800	Aldolase
Aba7804_19005	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
Aba7804_19010	COG0857	belongs to the CobB CobQ family
Aba7804_19010	COG0280	phosphate acetyltransferase
Aba7804_19015	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
Aba7804_19015	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
Aba7804_19035	COG0740	serine-type endopeptidase activity
Aba7804_19045	COG4774	siderophore transport
Aba7804_19055	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Aba7804_19065	COG2813	Specifically methylates the guanine in position
Aba7804_19065	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Aba7804_19170	COG0788	formyltetrahydrofolate deformylase activity
Aba7804_19185	COG0227	Belongs to the bacterial ribosomal protein bL28 family
Aba7804_19190	COG0267	Belongs to the bacterial ribosomal protein bL33 family
Aba7804_19215	COG0724	RNA recognition motif
Aba7804_19220	COG0210	DNA helicase
Aba7804_19245	COG1733	regulation of RNA biosynthetic process
Aba7804_19270	COG1280	lysine exporter protein (LysE YggA)
Aba7804_19275	COG1560	Kdo2-lipid A biosynthetic process
Aba7804_19285	COG1301	dicarboxylic acid transport
Aba7804_19340	COG0473	3-isopropylmalate dehydrogenase activity
Aba7804_19395	COG0583	DNA-binding transcription factor activity
Aba7804_19405	COG0625	glutathione transferase activity
Aba7804_19410	COG2378	regulation of single-species biofilm formation
Aba7804_19415	COG0546	phosphoglycolate phosphatase activity
Aba7804_19430	COG1530	ribonuclease E activity
Aba7804_19450	COG0583	DNA-binding transcription factor activity
Aba7804_19455	COG4221	oxidoreductase activity
Aba7804_19460	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Aba7804_19470	COG0534	Mate efflux family protein
Aba7804_19485	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Aba7804_19525	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
Aba7804_19530	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Aba7804_19545	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
Aba7804_19555	COG0644	oxidoreductase
Aba7804_19555	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
Aba7804_19565	COG0425	Belongs to the sulfur carrier protein TusA family
Aba7804_19570	COG4535	Mg2 and Co2 transporter CorC
Aba7804_19580	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Aba7804_19600	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
Aba7804_19605	COG0475	glutathione-regulated potassium exporter activity
Aba7804_19605	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Aba7804_19620	COG0484	heat shock protein binding
Aba7804_19625	COG0789	Transcriptional regulator
Aba7804_19630	COG0598	Magnesium transport protein CorA
Aba7804_19650	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Aba7804_19660	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
Aba7804_19680	COG2226	methyltransferase
Aba7804_19695	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aba7804_19710	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
Aba7804_19725	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Aba7804_19725	COG2111	Na H antiporter
Aba7804_19730	COG1006	Multisubunit Na H antiporter MnhC subunit
Aba7804_19735	COG0651	ATP synthesis coupled electron transport
Aba7804_19745	COG2212	antiporter activity
Aba7804_19765	COG0195	Participates in both transcription termination and antitermination
Aba7804_19815	COG0237	dephospho-CoA kinase activity
Aba7804_19825	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Aba7804_19840	COG0497	DNA recombination
Aba7804_19850	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
Aba7804_19885	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
Aba7804_19955	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
Aba7804_19970	COG0326	Molecular chaperone. Has ATPase activity
Aba7804_19985	COG2056	Na+-H+ antiporter family
Aba7804_20085	COG0546	phosphoglycolate phosphatase activity
Aba7804_20090	COG1716	ATPase activity
Aba7804_20135	COG0181	hydroxymethylbilane synthase activity
Aba7804_20165	COG2826	transposase and inactivated derivatives, IS30 family
Aba7804_20255	COG1192	Involved in chromosome partitioning
Aba7804_20305	COG0739	heme binding
Aba7804_20500	COG0501	Belongs to the peptidase M48B family
Aba7804_20550	COG0589	response to stress
Aba7804_20555	COG0659	secondary active sulfate transmembrane transporter activity
Aba7804_20585	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
Aba7804_20705	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
Aba7804_20785	COG3316	Transposase and inactivated derivatives
Aba7804_20830	COG3316	Transposase and inactivated derivatives
Aba7804_20850	COG0659	secondary active sulfate transmembrane transporter activity
Aba7804_20855	COG3316	Transposase and inactivated derivatives
Aba7804_20910	COG1373	ATPase (AAA superfamily
Aba7804_20995	COG2184	nucleotidyltransferase activity
Aba7804_21050	COG1309	transcriptional regulator
Aba7804_21085	COG0633	Ferredoxin
Aba7804_21090	COG2207	Transcriptional regulator
Aba7804_21110	COG3316	Transposase and inactivated derivatives