locus-tag	class	description
Aba7835_00010	COG0592	DNA-directed DNA polymerase activity
Aba7835_00020	COG0187	DNA topoisomerase II activity
Aba7835_00030	COG0586	Pfam SNARE associated Golgi protein
Aba7835_00035	COG0488	(ABC) transporter
Aba7835_00060	COG0596	Alpha beta hydrolase
Aba7835_00065	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
Aba7835_00070	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
Aba7835_00110	COG0733	neurotransmitter:sodium symporter activity
Aba7835_00145	COG0583	DNA-binding transcription factor activity
Aba7835_00150	COG2233	PERMEase
Aba7835_00165	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aba7835_00200	COG2814	Major facilitator Superfamily
Aba7835_00205	COG0656	L-ascorbic acid biosynthetic process
Aba7835_00210	COG0583	DNA-binding transcription factor activity
Aba7835_00225	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Aba7835_00230	COG1064	alcohol dehydrogenase
Aba7835_00235	COG2818	Glycosylase
Aba7835_00250	COG1194	a g-specific adenine glycosylase
Aba7835_00270	COG2983	Belongs to the UPF0260 family
Aba7835_00275	COG2133	pyrroloquinoline quinone binding
Aba7835_00280	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
Aba7835_00285	COG2116	formate transmembrane transporter activity
Aba7835_00305	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Aba7835_00310	COG1335	isochorismatase
Aba7835_00315	COG0385	Bile acid
Aba7835_00320	COG0534	Mate efflux family protein
Aba7835_00325	COG1683	Conserved Protein
Aba7835_00345	COG0625	glutathione transferase activity
Aba7835_00355	COG1113	amino acid transport
Aba7835_00365	COG0523	cobalamin synthesis protein
Aba7835_00375	COG2188	Transcriptional regulator
Aba7835_00405	COG0010	Belongs to the arginase family
Aba7835_00415	COG0546	phosphoglycolate phosphatase activity
Aba7835_00420	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
Aba7835_00425	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Aba7835_00435	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
Aba7835_00440	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
Aba7835_00530	COG0534	Mate efflux family protein
Aba7835_00535	COG0436	Aminotransferase
Aba7835_00540	COG2733	membrane
Aba7835_00555	COG2918	glutathione biosynthetic process
Aba7835_00565	COG3501	Rhs element vgr protein
Aba7835_00575	COG2826	transposase and inactivated derivatives, IS30 family
Aba7835_00580	COG2826	transposase and inactivated derivatives, IS30 family
Aba7835_00635	COG3150	esterase
Aba7835_00645	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7835_00650	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
Aba7835_00660	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aba7835_00670	COG2233	PERMEase
Aba7835_00675	COG2351	hydroxyisourate hydrolase activity
Aba7835_00710	COG3706	GGDEF domain
Aba7835_00725	COG1393	Belongs to the ArsC family
Aba7835_00730	COG0708	Exodeoxyribonuclease III
Aba7835_00755	COG0189	ligase activity
Aba7835_00775	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
Aba7835_00785	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
Aba7835_00800	COG4942	peptidase
Aba7835_00810	COG0508	dehydrogenase complex catalyzes the overall conversion of
Aba7835_00820	COG2119	membrane
Aba7835_00825	COG4774	siderophore transport
Aba7835_00830	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba7835_00830	COG0426	domain, Protein
Aba7835_00855	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Aba7835_00880	COG1902	pentaerythritol trinitrate reductase activity
Aba7835_00885	COG1519	Transferase
Aba7835_00890	COG1385	rRNA (uridine-N3-)-methyltransferase activity
Aba7835_00895	COG0668	transmembrane transport
Aba7835_00905	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Aba7835_00910	COG1335	isochorismatase
Aba7835_00915	COG1522	sequence-specific DNA binding
Aba7835_00940	COG2198	Histidine kinase
Aba7835_00940	COG0784	Response regulator, receiver
Aba7835_00940	COG2205	protein histidine kinase activity
Aba7835_00945	COG3162	membrane
Aba7835_00950	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Aba7835_00960	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Aba7835_00970	COG3706	GGDEF domain
Aba7835_00980	COG1309	transcriptional regulator
Aba7835_01000	COG0352	thiamine-phosphate diphosphorylase activity
Aba7835_01000	COG0351	phosphomethylpyrimidine kinase
Aba7835_01000	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
Aba7835_01010	COG2814	Major facilitator Superfamily
Aba7835_01025	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
Aba7835_01035	COG1113	amino acid transport
Aba7835_01045	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Aba7835_01050	COG1012	belongs to the aldehyde dehydrogenase family
Aba7835_01060	COG1335	isochorismatase
Aba7835_01090	COG2814	Major facilitator Superfamily
Aba7835_01095	COG0583	DNA-binding transcription factor activity
Aba7835_01115	COG0667	Aldo Keto reductase
Aba7835_01145	COG1733	regulation of RNA biosynthetic process
Aba7835_01175	COG1733	regulation of RNA biosynthetic process
Aba7835_01185	COG2249	NAD(P)H dehydrogenase (quinone) activity
Aba7835_01255	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
Aba7835_01270	COG2329	Antibiotic biosynthesis monooxygenase
Aba7835_01305	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
Aba7835_01335	COG0427	acetyl-CoA hydrolase
Aba7835_01350	COG0745	RESPONSE REGULATOR receiver
Aba7835_01360	COG0659	secondary active sulfate transmembrane transporter activity
Aba7835_01365	COG4221	oxidoreductase activity
Aba7835_01375	COG0488	(ABC) transporter
Aba7835_01440	COG0833	amino acid
Aba7835_01485	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
Aba7835_01490	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
Aba7835_01505	COG2226	methyltransferase
Aba7835_01555	COG0067	glutamate synthase
Aba7835_01555	COG0069	glutamate synthase activity
Aba7835_01555	COG0070	glutamate synthase
Aba7835_01560	COG0493	'glutamate synthase
Aba7835_01570	COG1704	LemA family
Aba7835_01575	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
Aba7835_01590	COG3307	-O-antigen
Aba7835_01610	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Aba7835_01625	COG0194	GDP metabolic process
Aba7835_01675	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
Aba7835_01695	COG5380	lipid catabolic process
Aba7835_01700	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
Aba7835_01725	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Aba7835_01730	COG0277	FAD linked oxidase domain protein
Aba7835_01740	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
Aba7835_01745	COG2249	NAD(P)H dehydrogenase (quinone) activity
Aba7835_01760	COG1289	transmembrane transporter activity
Aba7835_01770	COG0628	permease
Aba7835_01775	COG1192	Involved in chromosome partitioning
Aba7835_01805	COG0833	amino acid
Aba7835_01810	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Aba7835_01815	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Aba7835_01825	COG1012	belongs to the aldehyde dehydrogenase family
Aba7835_01865	COG0583	DNA-binding transcription factor activity
Aba7835_01885	COG1106	Psort location Cytoplasmic, score
Aba7835_01920	COG0517	IMP dehydrogenase activity
Aba7835_01925	COG1983	PspC domain protein
Aba7835_01935	COG1960	acyl-CoA dehydrogenase activity
Aba7835_01950	COG0408	coproporphyrinogen oxidase activity
Aba7835_01970	COG0513	Belongs to the DEAD box helicase family
Aba7835_01975	COG1127	ABC transporter
Aba7835_01980	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Aba7835_01990	COG2854	intermembrane phospholipid transfer
Aba7835_02000	COG0598	Magnesium transport protein CorA
Aba7835_02010	COG0494	nUDIX hydrolase
Aba7835_02015	COG1040	competence protein
Aba7835_02020	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
Aba7835_02040	COG1946	Acyl-CoA thioesterase
Aba7835_02045	COG1301	dicarboxylic acid transport
Aba7835_02060	COG1959	2 iron, 2 sulfur cluster binding
Aba7835_02065	COG1017	nitric oxide dioxygenase activity
Aba7835_02065	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Aba7835_02075	COG0433	COG0433 Predicted ATPase
Aba7835_02080	COG0626	cystathionine gamma-synthase activity
Aba7835_02200	COG0257	Belongs to the bacterial ribosomal protein bL36 family
Aba7835_02210	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
Aba7835_02235	COG1960	acyl-CoA dehydrogenase activity
Aba7835_02240	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
Aba7835_02270	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
Aba7835_02275	COG0339	signal peptide processing
Aba7835_02280	COG0557	exoribonuclease II activity
Aba7835_02330	COG0179	Fumarylacetoacetate (FAA) hydrolase
Aba7835_02340	COG0697	spore germination
Aba7835_02345	COG1295	ribonuclease BN
Aba7835_02380	COG1702	phosphate starvation-inducible protein PhoH
Aba7835_02390	COG0741	lytic transglycosylase activity
Aba7835_02390	COG1196	nuclear chromosome segregation
Aba7835_02390	COG0739	heme binding
Aba7835_02420	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
Aba7835_02425	COG1183	phosphatidylcholine synthase activity
Aba7835_02475	COG1960	acyl-CoA dehydrogenase activity
Aba7835_02480	COG1309	transcriptional regulator
Aba7835_02495	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Aba7835_02500	COG1960	acyl-CoA dehydrogenase activity
Aba7835_02520	COG2969	positive regulation of protein catabolic process
Aba7835_02530	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Aba7835_02545	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Aba7835_02550	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
Aba7835_02570	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
Aba7835_02580	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Aba7835_02585	COG1408	metallophosphoesterase
Aba7835_02595	COG2199	diguanylate cyclase activity
Aba7835_02640	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Aba7835_02640	COG3453	Protein conserved in bacteria
Aba7835_02655	COG1607	acyl-coa hydrolase
Aba7835_02685	COG2350	Protein conserved in bacteria
Aba7835_02695	COG0613	PHP domain protein
Aba7835_02700	COG3781	membrane
Aba7835_02710	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
Aba7835_02715	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Aba7835_02725	COG1862	Preprotein translocase
Aba7835_02765	COG2826	transposase and inactivated derivatives, IS30 family
Aba7835_02785	COG2826	transposase and inactivated derivatives, IS30 family
Aba7835_02795	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
Aba7835_02815	COG0726	polysaccharide deacetylase
Aba7835_02820	COG0463	Glycosyl transferase, family 2
Aba7835_02825	COG0438	transferase activity, transferring glycosyl groups
Aba7835_02900	COG1960	acyl-CoA dehydrogenase activity
Aba7835_02905	COG1960	acyl-CoA dehydrogenase activity
Aba7835_02915	COG2205	protein histidine kinase activity
Aba7835_02920	COG0745	RESPONSE REGULATOR receiver
Aba7835_02925	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
Aba7835_02940	COG0584	glycerophosphoryl diester phosphodiesterase
Aba7835_02945	COG2096	Adenosyltransferase
Aba7835_02950	COG4206	TonB-dependent receptor
Aba7835_02960	COG0133	tryptophan synthase activity
Aba7835_02995	COG0285	dihydrofolate synthase activity
Aba7835_03015	COG0450	alkyl hydroperoxide reductase
Aba7835_03030	COG0477	Major facilitator Superfamily
Aba7835_03035	COG1272	protein, Hemolysin III
Aba7835_03065	COG0183	Belongs to the thiolase family
Aba7835_03070	COG2207	Transcriptional regulator
Aba7835_03090	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Aba7835_03110	COG0183	Belongs to the thiolase family
Aba7835_03120	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
Aba7835_03120	COG2885	chlorophyll binding
Aba7835_03130	COG1690	Belongs to the RtcB family
Aba7835_03135	COG0833	amino acid
Aba7835_03145	COG2233	PERMEase
Aba7835_03175	COG2094	Belongs to the DNA glycosylase MPG family
Aba7835_03180	COG4772	TonB-dependent receptor
Aba7835_03185	COG1902	pentaerythritol trinitrate reductase activity
Aba7835_03190	COG0679	Auxin Efflux Carrier
Aba7835_03200	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Aba7835_03205	COG0354	folic acid binding
Aba7835_03215	COG3189	MarR family transcriptional regulator
Aba7835_03220	COG2824	Alkylphosphonate utilization operon protein PhnA
Aba7835_03225	COG3422	double-strand break repair
Aba7835_03265	COG0840	transmembrane signaling receptor activity
Aba7835_03285	COG5510	response to toxic substance
Aba7835_03295	COG2832	Protein of unknown function (DUF454)
Aba7835_03300	COG1376	ErfK ybiS ycfS ynhG family protein
Aba7835_03350	COG1289	transmembrane transporter activity
Aba7835_03355	COG2814	Major facilitator Superfamily
Aba7835_03375	COG1115	amino acid carrier protein
Aba7835_03380	COG1752	Esterase of the alpha-beta hydrolase superfamily
Aba7835_03385	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Aba7835_03390	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
Aba7835_03395	COG3590	peptidase
Aba7835_03420	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Aba7835_03430	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Aba7835_03435	COG1077	Cell shape determining protein MreB Mrl
Aba7835_03440	COG1792	Involved in formation and maintenance of cell shape
Aba7835_03445	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
Aba7835_03450	COG0424	maF-like protein
Aba7835_03455	COG1530	ribonuclease E activity
Aba7835_03465	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Aba7835_03485	COG2249	NAD(P)H dehydrogenase (quinone) activity
Aba7835_03510	COG2207	Transcriptional regulator
Aba7835_03530	COG0464	growth
Aba7835_03555	COG2826	transposase and inactivated derivatives, IS30 family
Aba7835_03605	COG0305	Participates in initiation and elongation during chromosome replication
Aba7835_03640	COG0582	viral genome integration into host DNA
Aba7835_03650	COG1113	amino acid transport
Aba7835_03655	COG2828	Protein conserved in bacteria
Aba7835_03660	COG0142	geranyltranstransferase activity
Aba7835_03665	COG2315	Protein conserved in bacteria
Aba7835_03680	COG1752	Esterase of the alpha-beta hydrolase superfamily
Aba7835_03700	COG2194	sulfuric ester hydrolase activity
Aba7835_03705	COG0745	RESPONSE REGULATOR receiver
Aba7835_03710	COG0642	Histidine kinase
Aba7835_03720	COG0004	ammonium transporteR
Aba7835_03750	COG0525	valine-tRNA ligase activity
Aba7835_03760	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7835_03770	COG0393	Putative heavy-metal-binding
Aba7835_03775	COG0393	Putative heavy-metal-binding
Aba7835_03780	COG1538	Outer membrane efflux protein
Aba7835_03790	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aba7835_03795	COG0671	phosphoesterase, PA-phosphatase related
Aba7835_03800	COG0215	cysteine-tRNA ligase activity
Aba7835_03825	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
Aba7835_03840	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
Aba7835_03840	COG1648	precorrin-2 dehydrogenase activity
Aba7835_03845	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
Aba7835_03850	COG1733	regulation of RNA biosynthetic process
Aba7835_03860	COG0531	amino acid
Aba7835_03875	COG0321	lipoyl(octanoyl) transferase activity
Aba7835_03880	COG2921	Belongs to the UPF0250 family
Aba7835_03915	COG2009	succinate dehydrogenase
Aba7835_03920	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
Aba7835_03925	COG1053	succinate dehydrogenase
Aba7835_03930	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
Aba7835_03955	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Aba7835_03975	COG2354	Protein conserved in bacteria
Aba7835_03980	COG2321	neutral zinc metallopeptidase
Aba7835_04000	COG2843	Capsule synthesis protein
Aba7835_04015	COG0589	response to stress
Aba7835_04035	COG0505	Belongs to the CarA family
Aba7835_04060	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Aba7835_04065	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
Aba7835_04115	COG0477	Major facilitator Superfamily
Aba7835_04120	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
Aba7835_04140	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
Aba7835_04180	COG0584	glycerophosphoryl diester phosphodiesterase
Aba7835_04200	COG0741	lytic transglycosylase activity
Aba7835_04225	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
Aba7835_04250	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Aba7835_04260	COG3811	Belongs to the UPF0386 family
Aba7835_04310	COG0778	Nitroreductase
Aba7835_04325	COG1929	Belongs to the glycerate kinase type-1 family
Aba7835_04330	COG0243	molybdopterin cofactor binding
Aba7835_04335	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
Aba7835_04340	COG3339	Conserved Protein
Aba7835_04350	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
Aba7835_04365	COG1113	amino acid transport
Aba7835_04375	COG0019	diaminopimelate decarboxylase activity
Aba7835_04385	COG1280	lysine exporter protein (LysE YggA)
Aba7835_04390	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
Aba7835_04420	COG0463	Glycosyl transferase, family 2
Aba7835_04440	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aba7835_04470	COG4591	ABC-type transport system involved in lipoprotein release permease component
Aba7835_04475	COG1136	(ABC) transporter
Aba7835_04480	COG0658	competence protein
Aba7835_04480	COG2333	competence protein COMEC
Aba7835_04490	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Aba7835_04490	COG0616	signal peptide processing
Aba7835_04495	COG0596	Alpha beta hydrolase
Aba7835_04500	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
Aba7835_04510	COG0628	permease
Aba7835_04545	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Aba7835_04565	COG0823	Involved in the tonB-independent uptake of proteins
Aba7835_04585	COG0824	Thioesterase
Aba7835_04590	COG1473	amidohydrolase
Aba7835_04610	COG0047	phosphoribosylformylglycinamidine synthase activity
Aba7835_04610	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Aba7835_04615	COG2814	Major facilitator Superfamily
Aba7835_04625	COG1024	Enoyl-CoA hydratase
Aba7835_04630	COG1051	belongs to the nudix hydrolase family
Aba7835_04630	COG1056	cytidyltransferase-related domain
Aba7835_04640	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Aba7835_04655	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
Aba7835_04670	COG4625	pathogenesis
Aba7835_04675	COG0583	DNA-binding transcription factor activity
Aba7835_04680	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
Aba7835_04685	COG4208	sulfate ABC transporter
Aba7835_04690	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
Aba7835_04700	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
Aba7835_04705	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
Aba7835_04710	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
Aba7835_04730	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Aba7835_04745	COG0681	Belongs to the peptidase S26 family
Aba7835_04760	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
Aba7835_04770	COG1381	Involved in DNA repair and RecF pathway recombination
Aba7835_04775	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
Aba7835_04785	COG4221	oxidoreductase activity
Aba7835_04835	COG0556	nucleotide-excision repair
Aba7835_04890	COG2070	2-Nitropropane dioxygenase
Aba7835_04920	COG1215	transferase activity, transferring glycosyl groups
Aba7835_04935	COG0415	Belongs to the DNA photolyase family
Aba7835_04945	COG1252	NADH dehydrogenase
Aba7835_04950	COG1686	Belongs to the peptidase S11 family
Aba7835_04965	COG1187	pseudouridine synthase activity
Aba7835_04990	COG0477	Major facilitator Superfamily
Aba7835_04995	COG0583	DNA-binding transcription factor activity
Aba7835_05010	COG0612	Peptidase, M16
Aba7835_05035	COG0352	thiamine-phosphate diphosphorylase activity
Aba7835_05070	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Aba7835_05085	COG1309	transcriptional regulator
Aba7835_05095	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Aba7835_05100	COG0076	glutamate decarboxylase activity
Aba7835_05110	COG1522	sequence-specific DNA binding
Aba7835_05115	COG3961	Belongs to the TPP enzyme family
Aba7835_05120	COG1113	amino acid transport
Aba7835_05125	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
Aba7835_05130	COG0573	inorganic phosphate transmembrane transporter activity
Aba7835_05140	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
Aba7835_05145	COG0616	signal peptide processing
Aba7835_05180	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
Aba7835_05185	COG1686	Belongs to the peptidase S11 family
Aba7835_05210	COG0583	DNA-binding transcription factor activity
Aba7835_05215	COG1067	ATP-dependent peptidase activity
Aba7835_05220	COG2211	Major facilitator Superfamily
Aba7835_05240	COG4943	cyclic-guanylate-specific phosphodiesterase activity
Aba7835_05260	COG1966	Carbon starvation protein
Aba7835_05265	COG2879	small protein
Aba7835_05290	COG1741	Belongs to the pirin family
Aba7835_05300	COG2964	Protein conserved in bacteria
Aba7835_05315	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Aba7835_05320	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Aba7835_05325	COG4605	iron ion homeostasis
Aba7835_05330	COG4604	ABC transporter, ATP-binding protein
Aba7835_05335	COG4607	ABC-type enterochelin transport system periplasmic component
Aba7835_05340	COG4774	siderophore transport
Aba7835_05350	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Aba7835_05355	COG1021	2,3-dihydroxybenzoate-AMP ligase
Aba7835_05360	COG1535	isochorismatase
Aba7835_05360	COG3433	isochorismatase activity
Aba7835_05375	COG1132	(ABC) transporter
Aba7835_05380	COG5265	(ABC) transporter
Aba7835_05385	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
Aba7835_05395	COG1169	isochorismate synthase
Aba7835_05410	COG3739	integral membrane protein
Aba7835_05445	COG1529	Aldehyde oxidase and xanthine dehydrogenase
Aba7835_05480	COG0512	Glutamine amidotransferase of anthranilate synthase
Aba7835_05660	COG5410	chromosome segregation
Aba7835_05770	COG1598	PFAM Uncharacterised protein family UPF0150
Aba7835_05845	COG0582	viral genome integration into host DNA
Aba7835_05855	COG3104	oligopeptide transport
Aba7835_05870	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
Aba7835_05905	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
Aba7835_05910	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
Aba7835_05915	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Aba7835_05950	COG1385	rRNA (uridine-N3-)-methyltransferase activity
Aba7835_05955	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
Aba7835_05960	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
Aba7835_05975	COG1960	acyl-CoA dehydrogenase activity
Aba7835_05980	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Aba7835_05985	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Aba7835_05995	COG2223	nitrite transmembrane transporter activity
Aba7835_06005	COG0024	Methionine aminopeptidase
Aba7835_06010	COG0052	Belongs to the universal ribosomal protein uS2 family
Aba7835_06025	COG2207	Transcriptional regulator
Aba7835_06050	COG2951	lytic endotransglycosylase activity
Aba7835_06055	COG0772	Belongs to the SEDS family
Aba7835_06070	COG0842	Transport permease protein
Aba7835_06075	COG1131	(ABC) transporter
Aba7835_06080	COG0582	viral genome integration into host DNA
Aba7835_06115	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Aba7835_06380	COG3561	AntA/AntB antirepressor
Aba7835_06390	COG0739	heme binding
Aba7835_06495	COG1538	Outer membrane efflux protein
Aba7835_06505	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aba7835_06520	COG4215	(ABC) transporter
Aba7835_06525	COG4160	amino acid transport
Aba7835_06530	COG4598	ABC transporter
Aba7835_06540	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Aba7835_06550	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Aba7835_06565	COG1720	tRNA m6t6A37 methyltransferase activity
Aba7835_06585	COG0745	RESPONSE REGULATOR receiver
Aba7835_06590	COG0642	Histidine kinase
Aba7835_06600	COG0494	nUDIX hydrolase
Aba7835_06610	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
Aba7835_06615	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
Aba7835_06620	COG3139	Protein of unknown function (DUF1315)
Aba7835_06625	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Aba7835_06635	COG1301	dicarboxylic acid transport
Aba7835_06640	COG1960	acyl-CoA dehydrogenase activity
Aba7835_06645	COG2819	hydrolase of the alpha beta superfamily
Aba7835_06655	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
Aba7835_06665	COG2195	Cleaves the N-terminal amino acid of tripeptides
Aba7835_06670	COG1234	tRNA 3'-trailer cleavage
Aba7835_06700	COG2363	Small membrane protein
Aba7835_06720	COG0513	Belongs to the DEAD box helicase family
Aba7835_06730	COG0778	Nitroreductase
Aba7835_06760	COG1286	toxin biosynthetic process
Aba7835_06785	COG4783	chaperone-mediated protein folding
Aba7835_06790	COG1610	YqeY-like protein
Aba7835_06795	COG0828	Belongs to the bacterial ribosomal protein bS21 family
Aba7835_06845	COG2831	hemolysin activation secretion protein
Aba7835_06930	COG3111	PFAM Bacterial OB fold (BOF) protein
Aba7835_06955	COG3243	poly(R)-hydroxyalkanoic acid synthase
Aba7835_06960	COG0786	glutamate:sodium symporter activity
Aba7835_06970	COG2186	Transcriptional regulator
Aba7835_07020	COG0477	Major facilitator Superfamily
Aba7835_07045	COG2985	domain, Protein
Aba7835_07055	COG2995	paraquat-inducible protein a
Aba7835_07060	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
Aba7835_07060	COG3008	intermembrane lipid transfer
Aba7835_07070	COG1794	racemase activity, acting on amino acids and derivatives
Aba7835_07105	COG1301	dicarboxylic acid transport
Aba7835_07115	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Aba7835_07120	COG2011	ABC-type metal ion transport system permease component
Aba7835_07125	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
Aba7835_07130	COG1464	Belongs to the NlpA lipoprotein family
Aba7835_07135	COG0151	Belongs to the GarS family
Aba7835_07140	COG0138	bifunctional purine biosynthesis protein purh
Aba7835_07145	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
Aba7835_07175	COG2308	Evidence 4 Homologs of previously reported genes of
Aba7835_07185	COG1305	Transglutaminase-like
Aba7835_07195	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Aba7835_07200	COG0305	Participates in initiation and elongation during chromosome replication
Aba7835_07225	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
Aba7835_07235	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
Aba7835_07240	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
Aba7835_07260	COG2826	transposase and inactivated derivatives, IS30 family
Aba7835_07270	COG1649	PFAM Uncharacterised BCR, COG1649
Aba7835_07270	COG0726	polysaccharide deacetylase
Aba7835_07275	COG1215	transferase activity, transferring glycosyl groups
Aba7835_07280	COG3658	cytochrome
Aba7835_07290	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Aba7835_07310	COG0583	DNA-binding transcription factor activity
Aba7835_07340	COG1960	acyl-CoA dehydrogenase activity
Aba7835_07345	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Aba7835_07350	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba7835_07375	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
Aba7835_07380	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
Aba7835_07390	COG2205	protein histidine kinase activity
Aba7835_07395	COG0745	RESPONSE REGULATOR receiver
Aba7835_07400	COG0174	glutamine synthetase
Aba7835_07420	COG0729	surface antigen
Aba7835_07460	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Aba7835_07555	COG1484	DNA-dependent DNA replication
Aba7835_07580	COG2826	transposase and inactivated derivatives, IS30 family
Aba7835_07780	COG2026	Addiction module toxin, RelE StbE family
Aba7835_07820	COG0592	DNA-directed DNA polymerase activity
Aba7835_07915	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Aba7835_07945	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Aba7835_07950	COG2814	Major facilitator Superfamily
Aba7835_07965	COG0583	DNA-binding transcription factor activity
Aba7835_07980	COG1187	pseudouridine synthase activity
Aba7835_08000	COG0802	atpase or kinase
Aba7835_08005	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
Aba7835_08015	COG1923	regulation of RNA biosynthetic process
Aba7835_08020	COG0697	spore germination
Aba7835_08050	COG0519	Catalyzes the synthesis of GMP from XMP
Aba7835_08050	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Aba7835_08055	COG4302	ethanolamine ammonia-lyase activity
Aba7835_08060	COG4303	Ethanolamine ammonia lyase large subunit
Aba7835_08065	COG0531	amino acid
Aba7835_08085	COG1454	alcohol dehydrogenase
Aba7835_08090	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Aba7835_08115	COG0308	aminopeptidase N
Aba7835_08135	COG1605	Chorismate mutase
Aba7835_08155	COG1309	transcriptional regulator
Aba7835_08165	COG0668	transmembrane transport
Aba7835_08195	COG4773	Receptor
Aba7835_08215	COG0488	(ABC) transporter
Aba7835_08220	COG0589	response to stress
Aba7835_08235	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
Aba7835_08245	COG3135	benzoate transporter
Aba7835_08250	COG1522	sequence-specific DNA binding
Aba7835_08265	COG0583	DNA-binding transcription factor activity
Aba7835_08275	COG0183	Belongs to the thiolase family
Aba7835_08290	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
Aba7835_08305	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
Aba7835_08315	COG0824	Thioesterase
Aba7835_08320	COG1454	alcohol dehydrogenase
Aba7835_08330	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Aba7835_08350	COG0069	glutamate synthase activity
Aba7835_08370	COG2814	Major facilitator Superfamily
Aba7835_08385	COG0511	ligase activity, forming carbon-carbon bonds
Aba7835_08400	COG1116	anion transmembrane transporter activity
Aba7835_08400	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Aba7835_08405	COG0745	RESPONSE REGULATOR receiver
Aba7835_08415	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Aba7835_08415	COG2146	nitrite reductase [NAD(P)H] activity
Aba7835_08420	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Aba7835_08425	COG0243	molybdopterin cofactor binding
Aba7835_08435	COG0243	molybdopterin cofactor binding
Aba7835_08440	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Aba7835_08455	COG0315	cyclic pyranopterin monophosphate synthase activity
Aba7835_08455	COG0521	Mo-molybdopterin cofactor biosynthetic process
Aba7835_08460	COG0303	'Molybdopterin
Aba7835_08470	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Aba7835_08475	COG0697	spore germination
Aba7835_08495	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
Aba7835_08500	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Aba7835_08560	COG2204	response regulator
Aba7835_08565	COG3852	Histidine kinase
Aba7835_08590	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
Aba7835_08595	COG0575	Belongs to the CDS family
Aba7835_08630	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Aba7835_08645	COG2137	regulation of response to DNA damage stimulus
Aba7835_08655	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
Aba7835_08665	COG2826	transposase and inactivated derivatives, IS30 family
Aba7835_08695	COG1522	sequence-specific DNA binding
Aba7835_08705	COG1113	amino acid transport
Aba7835_08720	COG0659	secondary active sulfate transmembrane transporter activity
Aba7835_08725	COG2135	peptidase activity
Aba7835_08740	COG3300	MHYT domain
Aba7835_08740	COG5001	Diguanylate cyclase
Aba7835_08760	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Aba7835_08760	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
Aba7835_08760	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Aba7835_08765	COG1105	Belongs to the carbohydrate kinase PfkB family
Aba7835_08770	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
Aba7835_08770	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Aba7835_08800	COG0024	Methionine aminopeptidase
Aba7835_08805	COG0583	DNA-binding transcription factor activity
Aba7835_08815	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
Aba7835_08820	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Aba7835_08825	COG0517	IMP dehydrogenase activity
Aba7835_08825	COG0516	GMP reductase activity
Aba7835_08850	COG0552	protein localization to endoplasmic reticulum
Aba7835_08860	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
Aba7835_08875	COG4890	Cyd operon protein YbgT
Aba7835_08880	COG1294	oxidase, subunit
Aba7835_08895	COG1585	Membrane protein implicated in regulation of membrane protease activity
Aba7835_08905	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Aba7835_08925	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Aba7835_08930	COG0569	domain protein
Aba7835_08935	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Aba7835_08975	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
Aba7835_08980	COG0542	response to heat
Aba7835_08990	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Aba7835_09005	COG1902	pentaerythritol trinitrate reductase activity
Aba7835_09005	COG0446	pyridine nucleotide-disulphide oxidoreductase
Aba7835_09050	COG2323	membrane
Aba7835_09055	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
Aba7835_09065	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Aba7835_09070	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
Aba7835_09075	COG0183	Belongs to the thiolase family
Aba7835_09080	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
Aba7835_09085	COG0596	Alpha beta hydrolase
Aba7835_09090	COG2271	Major facilitator Superfamily
Aba7835_09095	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
Aba7835_09100	COG3485	protocatechuate 3,4-dioxygenase
Aba7835_09105	COG3485	protocatechuate 3,4-dioxygenase
Aba7835_09110	COG0710	3-dehydroquinate dehydratase activity
Aba7835_09115	COG3420	alginic acid biosynthetic process
Aba7835_09120	COG3659	wide pore channel activity
Aba7835_09125	COG4993	Dehydrogenase
Aba7835_09135	COG3293	Transposase
Aba7835_09145	COG2391	methyltransferase activity
Aba7835_09160	COG1414	Transcriptional regulator
Aba7835_09165	COG0583	DNA-binding transcription factor activity
Aba7835_09170	COG1960	acyl-CoA dehydrogenase activity
Aba7835_09265	COG0583	DNA-binding transcription factor activity
Aba7835_09300	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Aba7835_09330	COG1960	acyl-CoA dehydrogenase activity
Aba7835_09335	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba7835_09340	COG1846	Transcriptional regulator
Aba7835_09345	COG1012	belongs to the aldehyde dehydrogenase family
Aba7835_09350	COG0129	dihydroxy-acid dehydratase activity
Aba7835_09360	COG0583	DNA-binding transcription factor activity
Aba7835_09365	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Aba7835_09375	COG2084	Dehydrogenase
Aba7835_09380	COG2207	Transcriptional regulator
Aba7835_09385	COG1064	alcohol dehydrogenase
Aba7835_09400	COG1120	ATPase activity
Aba7835_09420	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Aba7835_09460	COG2826	transposase and inactivated derivatives, IS30 family
Aba7835_09510	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
Aba7835_09535	COG2814	Major facilitator Superfamily
Aba7835_09560	COG2205	protein histidine kinase activity
Aba7835_09580	COG3539	Fimbrial protein
Aba7835_09605	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
Aba7835_09615	COG0753	catalase activity
Aba7835_09630	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Aba7835_09695	COG3433	isochorismatase activity
Aba7835_09695	COG1535	isochorismatase
Aba7835_09700	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7835_09705	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
Aba7835_09710	COG4149	molybdate abc transporter
Aba7835_09715	COG0725	ABC transporter, periplasmic molybdate-binding protein
Aba7835_09725	COG4638	Rieske (2fe-2S)
Aba7835_09730	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
Aba7835_09735	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Aba7835_09735	COG0543	2 iron, 2 sulfur cluster binding
Aba7835_09750	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba7835_09760	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7835_09765	COG0412	Dienelactone hydrolase
Aba7835_09775	COG2207	Transcriptional regulator
Aba7835_09780	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7835_09800	COG1309	transcriptional regulator
Aba7835_09820	COG0583	DNA-binding transcription factor activity
Aba7835_09835	COG2031	fatty acid transporter
Aba7835_09840	COG0183	Belongs to the thiolase family
Aba7835_09845	COG0583	DNA-binding transcription factor activity
Aba7835_09850	COG0583	DNA-binding transcription factor activity
Aba7835_09865	COG1027	Aspartate ammonia-lyase
Aba7835_09875	COG0477	Major facilitator Superfamily
Aba7835_09910	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
Aba7835_09935	COG0789	Transcriptional regulator
Aba7835_09945	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aba7835_09950	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Aba7835_09955	COG1538	Outer membrane efflux protein
Aba7835_09960	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
Aba7835_09980	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Aba7835_10070	COG0798	PFAM Bile acid sodium symporter
Aba7835_10105	COG4691	Plasmid stability protein
Aba7835_10130	COG0431	NADPH-dependent FMN reductase
Aba7835_10135	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Aba7835_10195	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Aba7835_10200	COG4521	taurine ABC transporter
Aba7835_10225	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
Aba7835_10230	COG1733	regulation of RNA biosynthetic process
Aba7835_10235	COG2207	Transcriptional regulator
Aba7835_10235	COG3708	Transcriptional regulator
Aba7835_10250	COG0730	response to heat
Aba7835_10260	COG3453	Protein conserved in bacteria
Aba7835_10260	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Aba7835_10270	COG3781	membrane
Aba7835_10275	COG1063	alcohol dehydrogenase
Aba7835_10290	COG0508	dehydrogenase complex catalyzes the overall conversion of
Aba7835_10295	COG0022	dehydrogenase e1 component
Aba7835_10300	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Aba7835_10305	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Aba7835_10320	COG3706	GGDEF domain
Aba7835_10335	COG0133	tryptophan synthase activity
Aba7835_10345	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Aba7835_10380	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
Aba7835_10405	COG2226	methyltransferase
Aba7835_10460	COG0842	Transport permease protein
Aba7835_10465	COG0842	Transport permease protein
Aba7835_10485	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Aba7835_10490	COG4773	Receptor
Aba7835_10510	COG0730	response to heat
Aba7835_10515	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Aba7835_10530	COG0406	alpha-ribazole phosphatase activity
Aba7835_10585	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
Aba7835_10595	COG4264	IucA IucC family
Aba7835_10600	COG4264	IucA IucC family
Aba7835_10605	COG2814	Major facilitator Superfamily
Aba7835_10620	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
Aba7835_10635	COG1960	acyl-CoA dehydrogenase activity
Aba7835_10640	COG1960	acyl-CoA dehydrogenase activity
Aba7835_10645	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Aba7835_10650	COG2207	Transcriptional regulator
Aba7835_10655	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Aba7835_10660	COG0776	regulation of translation
Aba7835_10685	COG0822	iron-sulfur transferase activity
Aba7835_10690	COG0316	Belongs to the HesB IscA family
Aba7835_10745	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
Aba7835_10750	COG0702	epimerase
Aba7835_10785	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Aba7835_10795	COG0339	signal peptide processing
Aba7835_10845	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
Aba7835_10895	COG0741	lytic transglycosylase activity
Aba7835_10895	COG1196	nuclear chromosome segregation
Aba7835_10895	COG0739	heme binding
Aba7835_10950	COG4695	Portal protein
Aba7835_11015	COG0305	Participates in initiation and elongation during chromosome replication
Aba7835_11085	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
Aba7835_11115	COG0776	regulation of translation
Aba7835_11135	COG0590	tRNA wobble adenosine to inosine editing
Aba7835_11165	COG2165	general secretion pathway protein
Aba7835_11180	COG0084	hydrolase, TatD family'
Aba7835_11200	COG1663	tetraacyldisaccharide 4'-kinase activity
Aba7835_11205	COG1132	(ABC) transporter
Aba7835_11215	COG0811	peptide transport
Aba7835_11220	COG1475	DNA binding
Aba7835_11225	COG1192	Involved in chromosome partitioning
Aba7835_11235	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Aba7835_11250	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Aba7835_11255	COG0191	fructose-bisphosphate aldolase activity
Aba7835_11275	COG0424	maF-like protein
Aba7835_11280	COG2850	peptidyl-arginine hydroxylation
Aba7835_11290	COG0640	Transcriptional regulator
Aba7835_11300	COG3619	membrane
Aba7835_11305	COG3122	Protein conserved in bacteria
Aba7835_11310	COG1132	(ABC) transporter
Aba7835_11330	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
Aba7835_11335	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Aba7835_11345	COG0506	proline dehydrogenase activity
Aba7835_11345	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
Aba7835_11345	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
Aba7835_11350	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
Aba7835_11365	COG3698	Phosphodiester glycosidase
Aba7835_11375	COG2353	YceI-like domain
Aba7835_11385	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
Aba7835_11430	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Aba7835_11430	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Aba7835_11455	COG3539	Fimbrial protein
Aba7835_11460	COG3121	Chaperone
Aba7835_11490	COG0697	spore germination
Aba7835_11500	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
Aba7835_11510	COG0583	DNA-binding transcription factor activity
Aba7835_11530	COG1309	transcriptional regulator
Aba7835_11545	COG1522	sequence-specific DNA binding
Aba7835_11555	COG1126	abc transporter atp-binding protein
Aba7835_11560	COG0765	amino acid transport
Aba7835_11565	COG0765	amino acid transport
Aba7835_11595	COG1464	Belongs to the NlpA lipoprotein family
Aba7835_11605	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
Aba7835_11610	COG2011	ABC-type metal ion transport system permease component
Aba7835_11615	COG0012	GTP binding
Aba7835_11640	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
Aba7835_11665	COG0436	Aminotransferase
Aba7835_11680	COG0386	Belongs to the glutathione peroxidase family
Aba7835_11690	COG0436	Aminotransferase
Aba7835_11695	COG1301	dicarboxylic acid transport
Aba7835_11730	COG3634	alkyl hydroperoxide reductase activity
Aba7835_11745	COG0583	DNA-binding transcription factor activity
Aba7835_11750	COG0798	PFAM Bile acid sodium symporter
Aba7835_11755	COG0640	Transcriptional regulator
Aba7835_11770	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
Aba7835_11780	COG0583	DNA-binding transcription factor activity
Aba7835_11790	COG1953	Uracil, thiamine, allantoin
Aba7835_11800	COG2175	clavaminate synthase activity
Aba7835_11805	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Aba7835_11815	COG4521	taurine ABC transporter
Aba7835_11825	COG2826	transposase and inactivated derivatives, IS30 family
Aba7835_11835	COG0477	Major facilitator Superfamily
Aba7835_11860	COG1271	oxidase subunit
Aba7835_11865	COG1294	oxidase, subunit
Aba7835_11875	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Aba7835_11895	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
Aba7835_11915	COG3052	prosthetic group binding
Aba7835_11920	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
Aba7835_11930	COG0583	DNA-binding transcription factor activity
Aba7835_11940	COG2814	Major facilitator Superfamily
Aba7835_11960	COG1346	cytolysis
Aba7835_11970	COG0583	DNA-binding transcription factor activity
Aba7835_11975	COG0625	glutathione transferase activity
Aba7835_11980	COG0625	glutathione transferase activity
Aba7835_11985	COG0583	DNA-binding transcription factor activity
Aba7835_12000	COG1045	serine acetyltransferase
Aba7835_12005	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Aba7835_12010	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
Aba7835_12020	COG1280	lysine exporter protein (LysE YggA)
Aba7835_12035	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Aba7835_12040	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Aba7835_12045	COG1126	abc transporter atp-binding protein
Aba7835_12050	COG0765	amino acid transport
Aba7835_12055	COG0765	amino acid transport
Aba7835_12075	COG2205	protein histidine kinase activity
Aba7835_12075	COG0784	Response regulator, receiver
Aba7835_12095	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Aba7835_12115	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7835_12160	COG0583	DNA-binding transcription factor activity
Aba7835_12180	COG0318	PFAM AMP-dependent synthetase and ligase
Aba7835_12185	COG1309	transcriptional regulator
Aba7835_12190	COG1960	acyl-CoA dehydrogenase activity
Aba7835_12195	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Aba7835_12200	COG1024	Enoyl-CoA hydratase
Aba7835_12215	COG0583	DNA-binding transcription factor activity
Aba7835_12230	COG1960	acyl-CoA dehydrogenase activity
Aba7835_12240	COG2814	Major facilitator Superfamily
Aba7835_12250	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
Aba7835_12255	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Aba7835_12260	COG2814	Major facilitator Superfamily
Aba7835_12265	COG1960	acyl-CoA dehydrogenase activity
Aba7835_12270	COG1024	Enoyl-CoA hydratase
Aba7835_12275	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7835_12280	COG1250	3-hydroxyacyl-CoA dehydrogenase
Aba7835_12285	COG0183	Belongs to the thiolase family
Aba7835_12305	COG1280	lysine exporter protein (LysE YggA)
Aba7835_12310	COG2192	nodulation
Aba7835_12325	COG1024	Enoyl-CoA hydratase
Aba7835_12340	COG1960	acyl-CoA dehydrogenase activity
Aba7835_12345	COG2814	Major facilitator Superfamily
Aba7835_12350	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Aba7835_12355	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
Aba7835_12370	COG3842	ATPase activity
Aba7835_12375	COG1840	ABC-type Fe3 transport system, periplasmic component
Aba7835_12385	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aba7835_12390	COG1414	Transcriptional regulator
Aba7835_12400	COG0583	DNA-binding transcription factor activity
Aba7835_12405	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
Aba7835_12410	COG1012	belongs to the aldehyde dehydrogenase family
Aba7835_12420	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
Aba7835_12430	COG1012	belongs to the aldehyde dehydrogenase family
Aba7835_12435	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Aba7835_12440	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba7835_12445	COG2267	carboxylic ester hydrolase activity
Aba7835_12465	COG3038	cytochrome b561
Aba7835_12470	COG0753	catalase activity
Aba7835_12500	COG2826	transposase and inactivated derivatives, IS30 family
Aba7835_12510	COG2050	protein possibly involved in aromatic compounds catabolism
Aba7835_12520	COG3327	negative regulation of DNA-templated transcription, initiation
Aba7835_12525	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
Aba7835_12530	COG0183	Belongs to the thiolase family
Aba7835_12540	COG1024	Enoyl-CoA hydratase
Aba7835_12545	COG1024	Enoyl-CoA hydratase
Aba7835_12550	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Aba7835_12555	COG2151	metal-sulfur cluster biosynthetic enzyme
Aba7835_12560	COG3396	Phenylacetate-CoA oxygenase
Aba7835_12565	COG3460	Phenylacetate-CoA oxygenase
Aba7835_12570	COG3396	Phenylacetate-CoA oxygenase
Aba7835_12575	COG1012	belongs to the aldehyde dehydrogenase family
Aba7835_12575	COG2030	dehydratase
Aba7835_12580	COG1760	l-serine dehydratase
Aba7835_12585	COG0531	amino acid
Aba7835_12590	COG1012	belongs to the aldehyde dehydrogenase family
Aba7835_12615	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Aba7835_12635	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Aba7835_12650	COG0789	Transcriptional regulator
Aba7835_12660	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
Aba7835_12675	COG2807	transmembrane transport
Aba7835_12680	COG0590	tRNA wobble adenosine to inosine editing
Aba7835_12690	COG0583	DNA-binding transcription factor activity
Aba7835_12730	COG2885	chlorophyll binding
Aba7835_12730	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
Aba7835_12805	COG1116	anion transmembrane transporter activity
Aba7835_12810	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Aba7835_12820	COG0864	Transcriptional regulator
Aba7835_12830	COG1733	regulation of RNA biosynthetic process
Aba7835_12835	COG2249	NAD(P)H dehydrogenase (quinone) activity
Aba7835_12840	COG0439	Biotin carboxylase
Aba7835_12855	COG1063	alcohol dehydrogenase
Aba7835_12880	COG0038	chloride channel
Aba7835_12885	COG4770	biotin carboxylase activity
Aba7835_12905	COG1914	H( )-stimulated, divalent metal cation uptake system
Aba7835_12915	COG0583	DNA-binding transcription factor activity
Aba7835_12960	COG3209	COG3209 Rhs family protein
Aba7835_12965	COG3501	Rhs element vgr protein
Aba7835_12995	COG1250	3-hydroxyacyl-CoA dehydrogenase
Aba7835_13020	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
Aba7835_13045	COG2814	Major facilitator Superfamily
Aba7835_13060	COG1560	Kdo2-lipid A biosynthetic process
Aba7835_13070	COG5006	permease, DMT superfamily
Aba7835_13075	COG1522	sequence-specific DNA binding
Aba7835_13090	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
Aba7835_13130	COG1538	Outer membrane efflux protein
Aba7835_13135	COG1137	ATPase activity
Aba7835_13140	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
Aba7835_13150	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
Aba7835_13195	COG1733	regulation of RNA biosynthetic process
Aba7835_13200	COG2814	Major facilitator Superfamily
Aba7835_13240	COG1278	Cold shock
Aba7835_13245	COG1280	lysine exporter protein (LysE YggA)
Aba7835_13280	COG1570	exodeoxyribonuclease VII activity
Aba7835_13365	COG2871	sodium ion transport
Aba7835_13375	COG0583	DNA-binding transcription factor activity
Aba7835_13380	COG4638	Rieske (2fe-2S)
Aba7835_13385	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
Aba7835_13390	COG0633	Ferredoxin
Aba7835_13390	COG0543	2 iron, 2 sulfur cluster binding
Aba7835_13395	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7835_13400	COG3135	benzoate transporter
Aba7835_13405	COG2814	Major facilitator Superfamily
Aba7835_13420	COG1643	Atp-dependent helicase
Aba7835_13425	COG0450	alkyl hydroperoxide reductase
Aba7835_13435	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
Aba7835_13445	COG3634	alkyl hydroperoxide reductase activity
Aba7835_13465	COG0220	tRNA (guanine-N7-)-methyltransferase activity
Aba7835_13470	COG0625	glutathione transferase activity
Aba7835_13480	COG2885	chlorophyll binding
Aba7835_13530	COG1765	OsmC-like protein
Aba7835_13540	COG0667	Aldo Keto reductase
Aba7835_13555	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
Aba7835_13565	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Aba7835_13585	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Aba7835_13595	COG3038	cytochrome b561
Aba7835_13600	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
Aba7835_13605	COG2252	PERMEase
Aba7835_13615	COG2072	flavoprotein involved in K transport
Aba7835_13630	COG1741	Belongs to the pirin family
Aba7835_13635	COG1309	transcriptional regulator
Aba7835_13645	COG0300	oxidoreductase activity
Aba7835_13650	COG2072	flavoprotein involved in K transport
Aba7835_13655	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
Aba7835_13700	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Aba7835_13715	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Aba7835_13755	COG0582	viral genome integration into host DNA
Aba7835_13765	COG1902	pentaerythritol trinitrate reductase activity
Aba7835_13765	COG0446	pyridine nucleotide-disulphide oxidoreductase
Aba7835_13775	COG5001	Diguanylate cyclase
Aba7835_13775	COG2203	Gaf domain
Aba7835_13775	COG3706	GGDEF domain
Aba7835_13775	COG4251	negative regulation of phosphorylation
Aba7835_13790	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Aba7835_13810	COG4172	Belongs to the ABC transporter superfamily
Aba7835_13815	COG4239	(ABC) transporter, permease
Aba7835_13820	COG4174	ABC transporter (Permease)
Aba7835_13830	COG0741	lytic transglycosylase activity
Aba7835_13830	COG1388	LysM domain
Aba7835_13830	COG1388	LysM domain
Aba7835_13830	COG0741	lytic transglycosylase activity
Aba7835_13835	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Aba7835_13895	COG0583	DNA-binding transcription factor activity
Aba7835_13900	COG1279	arginine transmembrane transporter activity
Aba7835_13920	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aba7835_13925	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Aba7835_13930	COG0006	proline dipeptidase activity
Aba7835_13960	COG2194	sulfuric ester hydrolase activity
Aba7835_14005	COG1196	nuclear chromosome segregation
Aba7835_14005	COG0739	heme binding
Aba7835_14005	COG0741	lytic transglycosylase activity
Aba7835_14115	COG5410	chromosome segregation
Aba7835_14300	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
Aba7835_14325	COG3384	dioxygenase
Aba7835_14335	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Aba7835_14340	COG2878	Part of a membrane complex involved in electron transport
Aba7835_14345	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Aba7835_14370	COG0768	penicillin binding
Aba7835_14375	COG0742	ribosomal rna small subunit methyltransferase
Aba7835_14390	COG0830	nickel cation binding
Aba7835_14400	COG0804	urea catabolic process
Aba7835_14445	COG1253	flavin adenine dinucleotide binding
Aba7835_14455	COG2851	Citrate transporter
Aba7835_14505	COG1773	rubredoxin
Aba7835_14510	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Aba7835_14520	COG0583	DNA-binding transcription factor activity
Aba7835_14555	COG4181	ATPase activity
Aba7835_14600	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Aba7835_14620	COG0306	phosphate transporter
Aba7835_14630	COG3958	Transketolase
Aba7835_14635	COG3959	Transketolase, thiamine diphosphate binding domain
Aba7835_14640	COG2271	Major facilitator Superfamily
Aba7835_14645	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7835_14650	COG0583	DNA-binding transcription factor activity
Aba7835_14670	COG2223	nitrite transmembrane transporter activity
Aba7835_14675	COG2207	Transcriptional regulator
Aba7835_14680	COG2066	Belongs to the glutaminase family
Aba7835_14685	COG0242	peptide deformylase activity
Aba7835_14690	COG0477	Major facilitator Superfamily
Aba7835_14700	COG0028	Belongs to the TPP enzyme family
Aba7835_14715	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7835_14720	COG2267	carboxylic ester hydrolase activity
Aba7835_14730	COG2271	Major facilitator Superfamily
Aba7835_14745	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7835_14765	COG1414	Transcriptional regulator
Aba7835_14780	COG1024	Enoyl-CoA hydratase
Aba7835_14790	COG1215	transferase activity, transferring glycosyl groups
Aba7835_14795	COG1649	PFAM Uncharacterised BCR, COG1649
Aba7835_14795	COG0726	polysaccharide deacetylase
Aba7835_14805	COG4681	YaeQ
Aba7835_14815	COG0523	cobalamin synthesis protein
Aba7835_14825	COG1607	acyl-coa hydrolase
Aba7835_14835	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Aba7835_14840	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Aba7835_14845	COG1309	transcriptional regulator
Aba7835_14875	COG0531	amino acid
Aba7835_14930	COG1595	DNA-templated transcription, initiation
Aba7835_14940	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Aba7835_14945	COG0477	Major facilitator Superfamily
Aba7835_15015	COG0405	Gamma-glutamyltransferase
Aba7835_15020	COG2814	Major facilitator Superfamily
Aba7835_15030	COG2050	protein possibly involved in aromatic compounds catabolism
Aba7835_15045	COG1090	epimerase
Aba7835_15065	COG0420	3'-5' exonuclease activity
Aba7835_15090	COG0735	belongs to the Fur family
Aba7835_15095	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Aba7835_15120	COG0121	glutamine amidotransferase
Aba7835_15135	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Aba7835_15145	COG0210	DNA helicase
Aba7835_15150	COG2885	chlorophyll binding
Aba7835_15155	COG0204	Acyl-transferase
Aba7835_15170	COG2894	cell division
Aba7835_15185	COG1280	lysine exporter protein (LysE YggA)
Aba7835_15190	COG1674	ftsk spoiiie
Aba7835_15195	COG0492	ferredoxin-NADP+ reductase activity
Aba7835_15200	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
Aba7835_15210	COG0456	acetyltransferase
Aba7835_15270	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
Aba7835_15270	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Aba7835_15290	COG1012	belongs to the aldehyde dehydrogenase family
Aba7835_15310	COG0473	3-isopropylmalate dehydrogenase activity
Aba7835_15315	COG0583	DNA-binding transcription factor activity
Aba7835_15335	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Aba7835_15360	COG0564	pseudouridine synthase activity
Aba7835_15370	COG0358	DNA primase activity
Aba7835_15385	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
Aba7835_15415	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Aba7835_15445	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Aba7835_15455	COG0352	thiamine-phosphate diphosphorylase activity
Aba7835_15455	COG0351	phosphomethylpyrimidine kinase
Aba7835_15455	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
Aba7835_15460	COG1652	LysM domain
Aba7835_15485	COG1399	metal-binding, possibly nucleic acid-binding protein
Aba7835_15490	COG3101	peptidyl-lysine hydroxylation
Aba7835_15495	COG0009	L-threonylcarbamoyladenylate synthase
Aba7835_15500	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
Aba7835_15505	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
Aba7835_15520	COG4106	trans-aconitate 2-methyltransferase activity
Aba7835_15535	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Aba7835_15535	COG2226	methyltransferase
Aba7835_15535	COG0596	Alpha beta hydrolase
Aba7835_15540	COG1877	trehalose-phosphatase activity
Aba7835_15545	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
Aba7835_15550	COG2223	nitrite transmembrane transporter activity
Aba7835_15570	COG1196	nuclear chromosome segregation
Aba7835_15580	COG0730	response to heat
Aba7835_15595	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Aba7835_15605	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Aba7835_15670	COG0489	protein tyrosine kinase activity
Aba7835_15680	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Aba7835_15680	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Aba7835_15710	COG2515	1-aminocyclopropane-1-carboxylate deaminase
Aba7835_15715	COG2081	HI0933 family
Aba7835_15725	COG0668	transmembrane transport
Aba7835_15745	COG0583	DNA-binding transcription factor activity
Aba7835_15765	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Aba7835_15770	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Aba7835_15800	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
Aba7835_15835	COG2205	protein histidine kinase activity
Aba7835_15840	COG0745	RESPONSE REGULATOR receiver
Aba7835_15860	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Aba7835_15870	COG0384	phenazine biosynthesis protein PhzF
Aba7835_15885	COG2826	transposase and inactivated derivatives, IS30 family
Aba7835_15950	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Aba7835_15955	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
Aba7835_15980	COG0583	DNA-binding transcription factor activity
Aba7835_16000	COG0583	DNA-binding transcription factor activity
Aba7835_16005	COG1053	succinate dehydrogenase
Aba7835_16015	COG1804	L-carnitine dehydratase bile acid-inducible protein F
Aba7835_16020	COG2814	Major facilitator Superfamily
Aba7835_16025	COG1960	acyl-CoA dehydrogenase activity
Aba7835_16030	COG0583	DNA-binding transcription factor activity
Aba7835_16035	COG1063	alcohol dehydrogenase
Aba7835_16065	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
Aba7835_16070	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
Aba7835_16075	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Aba7835_16095	COG2132	Multicopper oxidase
Aba7835_16105	COG0561	phosphatase activity
Aba7835_16110	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
Aba7835_16120	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
Aba7835_16135	COG1214	PFAM Peptidase M22, glycoprotease
Aba7835_16195	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
Aba7835_16200	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
Aba7835_16205	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
Aba7835_16265	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Aba7835_16275	COG1846	Transcriptional regulator
Aba7835_16280	COG1764	response to oxidative stress
Aba7835_16320	COG0037	tRNA processing
Aba7835_16330	COG0248	Ppx GppA phosphatase
Aba7835_16360	COG0072	phenylalanine-tRNA ligase activity
Aba7835_16380	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
Aba7835_16395	COG1238	metal cluster binding
Aba7835_16400	COG0625	glutathione transferase activity
Aba7835_16420	COG0318	PFAM AMP-dependent synthetase and ligase
Aba7835_16425	COG3028	Belongs to the UPF0307 family
Aba7835_16430	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
Aba7835_16450	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Aba7835_16455	COG0617	tRNA 3'-terminal CCA addition
Aba7835_16460	COG1555	photosystem II stabilization
Aba7835_16465	COG3956	TIGRFAM MazG family protein
Aba7835_16475	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Aba7835_16495	COG2205	protein histidine kinase activity
Aba7835_16495	COG5002	protein histidine kinase activity
Aba7835_16495	COG0784	Response regulator, receiver
Aba7835_16500	COG1024	Enoyl-CoA hydratase
Aba7835_16505	COG2084	Dehydrogenase
Aba7835_16510	COG3622	Belongs to the hyi family
Aba7835_16525	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
Aba7835_16530	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
Aba7835_16535	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
Aba7835_16540	COG0697	spore germination
Aba7835_16550	COG2814	Major facilitator Superfamily
Aba7835_16660	COG4695	Portal protein
Aba7835_16745	COG0305	Participates in initiation and elongation during chromosome replication
Aba7835_16815	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Aba7835_16825	COG0583	DNA-binding transcription factor activity
Aba7835_16835	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
Aba7835_16850	COG0084	hydrolase, TatD family'
Aba7835_16865	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
Aba7835_16875	COG2826	transposase and inactivated derivatives, IS30 family
Aba7835_16905	COG0440	acetolactate synthase activity
Aba7835_16910	COG0028	Belongs to the TPP enzyme family
Aba7835_16940	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Aba7835_16945	COG1136	(ABC) transporter
Aba7835_16945	COG0577	efflux transmembrane transporter activity
Aba7835_16950	COG1538	Outer membrane efflux protein
Aba7835_16965	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
Aba7835_16970	COG1162	GTPase activity
Aba7835_16980	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
Aba7835_17020	COG1426	Protein conserved in bacteria
Aba7835_17055	COG0793	Belongs to the peptidase S41A family
Aba7835_17070	COG2267	carboxylic ester hydrolase activity
Aba7835_17080	COG1012	belongs to the aldehyde dehydrogenase family
Aba7835_17085	COG3265	gluconokinase activity
Aba7835_17095	COG0800	Aldolase
Aba7835_17105	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
Aba7835_17110	COG0857	belongs to the CobB CobQ family
Aba7835_17110	COG0280	phosphate acetyltransferase
Aba7835_17115	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
Aba7835_17115	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
Aba7835_17135	COG0740	serine-type endopeptidase activity
Aba7835_17145	COG4774	siderophore transport
Aba7835_17155	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Aba7835_17165	COG2813	Specifically methylates the guanine in position
Aba7835_17165	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Aba7835_17265	COG0788	formyltetrahydrofolate deformylase activity
Aba7835_17280	COG0227	Belongs to the bacterial ribosomal protein bL28 family
Aba7835_17285	COG0267	Belongs to the bacterial ribosomal protein bL33 family
Aba7835_17290	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Aba7835_17290	COG4651	solute:proton antiporter activity
Aba7835_17310	COG0724	RNA recognition motif
Aba7835_17315	COG0210	DNA helicase
Aba7835_17340	COG1733	regulation of RNA biosynthetic process
Aba7835_17360	COG1280	lysine exporter protein (LysE YggA)
Aba7835_17365	COG1560	Kdo2-lipid A biosynthetic process
Aba7835_17375	COG1301	dicarboxylic acid transport
Aba7835_17430	COG0473	3-isopropylmalate dehydrogenase activity
Aba7835_17495	COG0583	DNA-binding transcription factor activity
Aba7835_17505	COG0625	glutathione transferase activity
Aba7835_17510	COG2378	regulation of single-species biofilm formation
Aba7835_17515	COG0546	phosphoglycolate phosphatase activity
Aba7835_17530	COG1530	ribonuclease E activity
Aba7835_17550	COG0583	DNA-binding transcription factor activity
Aba7835_17555	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7835_17560	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Aba7835_17570	COG0534	Mate efflux family protein
Aba7835_17585	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Aba7835_17625	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
Aba7835_17630	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Aba7835_17645	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
Aba7835_17655	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
Aba7835_17655	COG0644	oxidoreductase
Aba7835_17660	COG0425	Belongs to the sulfur carrier protein TusA family
Aba7835_17665	COG4535	Mg2 and Co2 transporter CorC
Aba7835_17675	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Aba7835_17695	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
Aba7835_17700	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Aba7835_17700	COG0475	glutathione-regulated potassium exporter activity
Aba7835_17715	COG0484	heat shock protein binding
Aba7835_17720	COG0789	Transcriptional regulator
Aba7835_17725	COG0598	Magnesium transport protein CorA
Aba7835_17745	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Aba7835_17750	COG1074	ATP-dependent DNA helicase activity
Aba7835_17755	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
Aba7835_17775	COG2226	methyltransferase
Aba7835_17785	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Aba7835_17795	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
Aba7835_17810	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Aba7835_17810	COG2111	Na H antiporter
Aba7835_17815	COG1006	Multisubunit Na H antiporter MnhC subunit
Aba7835_17820	COG0651	ATP synthesis coupled electron transport
Aba7835_17830	COG2212	antiporter activity
Aba7835_17850	COG0195	Participates in both transcription termination and antitermination
Aba7835_17900	COG0237	dephospho-CoA kinase activity
Aba7835_17910	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Aba7835_17925	COG0497	DNA recombination
Aba7835_17935	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
Aba7835_17965	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Aba7835_17965	COG2169	Transcriptional regulator
Aba7835_17970	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
Aba7835_18035	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
Aba7835_18050	COG0326	Molecular chaperone. Has ATPase activity
Aba7835_18065	COG2056	Na+-H+ antiporter family
Aba7835_18070	COG0596	Alpha beta hydrolase
Aba7835_18165	COG0546	phosphoglycolate phosphatase activity
Aba7835_18170	COG1716	ATPase activity
Aba7835_18215	COG0181	hydroxymethylbilane synthase activity
Aba7835_18225	COG3275	phosphorelay sensor kinase activity
Aba7835_18245	COG1538	Outer membrane efflux protein
Aba7835_18250	COG0697	spore germination
Aba7835_18275	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
Aba7835_18280	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
Aba7835_18285	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Aba7835_18290	COG0772	Belongs to the SEDS family
Aba7835_18315	COG4974	Belongs to the 'phage' integrase family
Aba7835_18320	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Aba7835_18330	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
Aba7835_18340	COG2197	response regulator
Aba7835_18355	COG0793	Belongs to the peptidase S41A family
Aba7835_18360	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
Aba7835_18365	COG0795	lipopolysaccharide-transporting ATPase activity
Aba7835_18405	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Aba7835_18405	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Aba7835_18415	COG0004	ammonium transporteR
Aba7835_18420	COG0347	Belongs to the P(II) protein family
Aba7835_18430	COG0606	chelatase, subunit chli
Aba7835_18440	COG0659	secondary active sulfate transmembrane transporter activity
Aba7835_18445	COG0589	response to stress
Aba7835_18495	COG0606	chelatase, subunit chli
Aba7835_18500	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Aba7835_18510	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Aba7835_18530	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
Aba7835_18545	COG0318	PFAM AMP-dependent synthetase and ligase
Aba7835_18555	COG0477	Major facilitator Superfamily
Aba7835_18560	COG2860	membrane
Aba7835_18570	COG1253	flavin adenine dinucleotide binding
Aba7835_18580	COG2814	Major facilitator Superfamily
Aba7835_18590	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Aba7835_18625	COG0655	NAD(P)H dehydrogenase (quinone) activity
Aba7835_18635	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Aba7835_18670	COG1309	transcriptional regulator
Aba7835_18705	COG0758	DNA mediated transformation
Aba7835_18715	COG0697	spore germination
Aba7835_18720	COG1309	transcriptional regulator
Aba7835_18735	COG0386	Belongs to the glutathione peroxidase family
Aba7835_18800	COG1121	(ABC) transporter
Aba7835_18805	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Aba7835_18810	COG1280	lysine exporter protein (LysE YggA)
Aba7835_18815	COG2837	iron assimilation
Aba7835_18820	COG0281	malic enzyme
Aba7835_18865	COG0519	Catalyzes the synthesis of GMP from XMP
Aba7835_18865	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Aba7835_18870	COG4399	Belongs to the UPF0754 family
Aba7835_18875	COG2259	Doxx family
Aba7835_18880	COG0586	Pfam SNARE associated Golgi protein
Aba7835_18895	COG1192	Involved in chromosome partitioning
Aba7835_18905	COG0271	Belongs to the BolA IbaG family
Aba7835_18945	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
Aba7835_18945	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Aba7835_18945	COG3321	synthase
Aba7835_18945	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Aba7835_18950	COG1960	acyl-CoA dehydrogenase activity
Aba7835_18965	COG2197	response regulator
Aba7835_18975	COG3916	Acyl-homoserine-lactone synthase
Aba7835_18980	COG0477	Major facilitator Superfamily
Aba7835_18985	COG1024	Enoyl-CoA hydratase
Aba7835_18990	COG1024	Enoyl-CoA hydratase
Aba7835_18995	COG1960	acyl-CoA dehydrogenase activity
Aba7835_19000	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Aba7835_19020	COG1113	amino acid transport
Aba7835_19025	COG1113	amino acid transport
Aba7835_19030	COG0251	oxidation-reduction process
Aba7835_19045	COG1522	sequence-specific DNA binding
Aba7835_19070	COG0564	pseudouridine synthase activity
Aba7835_19165	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
Aba7835_19180	COG1802	Transcriptional regulator
Aba7835_19190	COG1448	Aminotransferase
Aba7835_19195	COG0277	FAD linked oxidase domain protein
Aba7835_19205	COG2186	Transcriptional regulator
Aba7835_19215	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Aba7835_19225	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Aba7835_19240	COG1210	Utp--glucose-1-phosphate uridylyltransferase
Aba7835_19245	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Aba7835_19250	COG1216	Glycosyl transferase, family 2
Aba7835_19270	COG0438	transferase activity, transferring glycosyl groups
Aba7835_19300	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
Aba7835_19330	COG0728	peptidoglycan biosynthetic process
Aba7835_19335	COG3023	N-Acetylmuramoyl-L-alanine amidase
Aba7835_19390	COG0546	phosphoglycolate phosphatase activity
Aba7835_19395	COG1028	Short-chain dehydrogenase reductase Sdr
Aba7835_19415	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Aba7835_19420	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Aba7835_19425	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Aba7835_19430	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Aba7835_19435	COG1116	anion transmembrane transporter activity
Aba7835_19440	COG1309	transcriptional regulator
Aba7835_19445	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
Aba7835_19455	COG0196	riboflavin kinase activity
Aba7835_19460	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
Aba7835_19470	COG1047	Peptidyl-prolyl cis-trans
Aba7835_19510	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Aba7835_19565	COG2951	lytic endotransglycosylase activity
Aba7835_19570	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
Aba7835_19590	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Aba7835_19600	COG0671	phosphoesterase, PA-phosphatase related
Aba7835_19605	COG0861	Integral membrane protein TerC family
Aba7835_19615	COG0754	glutathionylspermidine amidase activity
Aba7835_19625	COG0402	S-adenosylhomocysteine deaminase activity
Aba7835_19640	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Aba7835_19645	COG1230	cation diffusion facilitator family transporter
Aba7835_19660	COG0706	membrane insertase activity
Aba7835_19675	COG0230	Belongs to the bacterial ribosomal protein bL34 family
Aba7835_19700	COG2826	transposase and inactivated derivatives, IS30 family
Aba7835_19750	COG2826	transposase and inactivated derivatives, IS30 family
Aba7835_19845	COG0484	heat shock protein binding
Aba7835_19940	COG3853	Toxic anion resistance protein (TelA)
Aba7835_19960	COG1475	DNA binding
Aba7835_20020	COG1525	nuclease
Aba7835_20090	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Aba7835_20170	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Aba7835_20205	COG0741	lytic transglycosylase activity
Aba7835_20240	COG2826	transposase and inactivated derivatives, IS30 family