locus-tag	class	description
ABA1_00001	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ABA1_00002	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
ABA1_00003	COG0596	Alpha beta hydrolase
ABA1_00008	COG0488	(ABC) transporter
ABA1_00009	COG0586	Pfam SNARE associated Golgi protein
ABA1_00011	COG0187	DNA topoisomerase II activity
ABA1_00013	COG0592	DNA-directed DNA polymerase activity
ABA1_00015	COG0230	Belongs to the bacterial ribosomal protein bL34 family
ABA1_00018	COG0706	membrane insertase activity
ABA1_00021	COG1230	cation diffusion facilitator family transporter
ABA1_00022	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABA1_00026	COG0402	S-adenosylhomocysteine deaminase activity
ABA1_00028	COG0754	glutathionylspermidine amidase activity
ABA1_00030	COG0861	Integral membrane protein TerC family
ABA1_00031	COG0671	phosphoesterase, PA-phosphatase related
ABA1_00033	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ABA1_00036	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ABA1_00038	COG2951	lytic endotransglycosylase activity
ABA1_00044	COG0583	DNA-binding transcription factor activity
ABA1_00049	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ABA1_00057	COG1047	Peptidyl-prolyl cis-trans
ABA1_00059	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ABA1_00060	COG0196	riboflavin kinase activity
ABA1_00062	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABA1_00063	COG1309	transcriptional regulator
ABA1_00064	COG1116	anion transmembrane transporter activity
ABA1_00065	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABA1_00066	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABA1_00067	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABA1_00068	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABA1_00072	COG1028	Short-chain dehydrogenase reductase Sdr
ABA1_00073	COG0546	phosphoglycolate phosphatase activity
ABA1_00084	COG3023	N-Acetylmuramoyl-L-alanine amidase
ABA1_00085	COG0728	peptidoglycan biosynthetic process
ABA1_00091	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ABA1_00094	COG0438	transferase activity, transferring glycosyl groups
ABA1_00097	COG0438	transferase activity, transferring glycosyl groups
ABA1_00098	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ABA1_00100	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ABA1_00102	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ABA1_00105	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABA1_00107	COG2186	Transcriptional regulator
ABA1_00109	COG0277	FAD linked oxidase domain protein
ABA1_00110	COG1448	Aminotransferase
ABA1_00111	COG1802	Transcriptional regulator
ABA1_00114	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ABA1_00118	COG1051	belongs to the nudix hydrolase family
ABA1_00123	COG0564	pseudouridine synthase activity
ABA1_00128	COG1522	sequence-specific DNA binding
ABA1_00131	COG0251	oxidation-reduction process
ABA1_00132	COG1113	amino acid transport
ABA1_00133	COG1113	amino acid transport
ABA1_00137	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABA1_00138	COG1960	acyl-CoA dehydrogenase activity
ABA1_00139	COG1024	Enoyl-CoA hydratase
ABA1_00140	COG1024	Enoyl-CoA hydratase
ABA1_00141	COG0477	Major facilitator Superfamily
ABA1_00142	COG3916	Acyl-homoserine-lactone synthase
ABA1_00144	COG2197	response regulator
ABA1_00146	COG1960	acyl-CoA dehydrogenase activity
ABA1_00147	COG3321	synthase
ABA1_00147	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABA1_00147	COG0318	PFAM AMP-dependent synthetase and ligase
ABA1_00147	COG0300	oxidoreductase activity
ABA1_00147	COG1028	Short-chain dehydrogenase reductase Sdr
ABA1_00151	COG2267	carboxylic ester hydrolase activity
ABA1_00155	COG0271	Belongs to the BolA IbaG family
ABA1_00157	COG1192	Involved in chromosome partitioning
ABA1_00160	COG0586	Pfam SNARE associated Golgi protein
ABA1_00161	COG2259	Doxx family
ABA1_00162	COG4399	Belongs to the UPF0754 family
ABA1_00163	COG0519	Catalyzes the synthesis of GMP from XMP
ABA1_00163	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABA1_00172	COG0281	malic enzyme
ABA1_00173	COG2837	iron assimilation
ABA1_00174	COG1280	lysine exporter protein (LysE YggA)
ABA1_00175	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABA1_00176	COG1121	(ABC) transporter
ABA1_00189	COG0386	Belongs to the glutathione peroxidase family
ABA1_00192	COG1309	transcriptional regulator
ABA1_00193	COG0697	spore germination
ABA1_00195	COG0758	DNA mediated transformation
ABA1_00202	COG1309	transcriptional regulator
ABA1_00209	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ABA1_00211	COG0655	NAD(P)H dehydrogenase (quinone) activity
ABA1_00218	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ABA1_00220	COG2814	Major facilitator Superfamily
ABA1_00222	COG1253	flavin adenine dinucleotide binding
ABA1_00223	COG3012	SEC-C Motif Domain Protein
ABA1_00224	COG2860	membrane
ABA1_00225	COG0477	Major facilitator Superfamily
ABA1_00227	COG0318	PFAM AMP-dependent synthetase and ligase
ABA1_00230	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ABA1_00234	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABA1_00236	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABA1_00237	COG0606	chelatase, subunit chli
ABA1_00243	COG2072	flavoprotein involved in K transport
ABA1_00244	COG0492	ferredoxin-NADP+ reductase activity
ABA1_00245	COG0431	NADPH-dependent FMN reductase
ABA1_00246	COG0798	PFAM Bile acid sodium symporter
ABA1_00248	COG0640	Transcriptional regulator
ABA1_00251	COG0789	Transcriptional regulator
ABA1_00256	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ABA1_00261	COG3316	Transposase and inactivated derivatives
ABA1_00269	COG0789	Transcriptional regulator
ABA1_00272	COG0697	spore germination
ABA1_00275	COG1662	PFAM IS1 transposase
ABA1_00277	COG3316	Transposase and inactivated derivatives
ABA1_00288	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ABA1_00290	COG0789	Transcriptional regulator
ABA1_00294	COG0659	secondary active sulfate transmembrane transporter activity
ABA1_00297	COG0347	Belongs to the P(II) protein family
ABA1_00298	COG0004	ammonium transporteR
ABA1_00300	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABA1_00300	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABA1_00308	COG0795	lipopolysaccharide-transporting ATPase activity
ABA1_00309	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ABA1_00310	COG0793	Belongs to the peptidase S41A family
ABA1_00313	COG2197	response regulator
ABA1_00315	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ABA1_00317	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABA1_00318	COG4974	Belongs to the 'phage' integrase family
ABA1_00323	COG0772	Belongs to the SEDS family
ABA1_00324	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABA1_00325	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ABA1_00326	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABA1_00331	COG0697	spore germination
ABA1_00332	COG1538	Outer membrane efflux protein
ABA1_00336	COG3275	phosphorelay sensor kinase activity
ABA1_00338	COG0181	hydroxymethylbilane synthase activity
ABA1_00347	COG1716	ATPase activity
ABA1_00348	COG0546	phosphoglycolate phosphatase activity
ABA1_00368	COG2056	Na+-H+ antiporter family
ABA1_00371	COG0326	Molecular chaperone. Has ATPase activity
ABA1_00374	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
ABA1_00386	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ABA1_00387	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABA1_00387	COG2169	Transcriptional regulator
ABA1_00393	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ABA1_00395	COG0497	DNA recombination
ABA1_00398	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABA1_00400	COG0237	dephospho-CoA kinase activity
ABA1_00410	COG0195	Participates in both transcription termination and antitermination
ABA1_00414	COG2212	antiporter activity
ABA1_00416	COG0651	ATP synthesis coupled electron transport
ABA1_00417	COG1006	Multisubunit Na H antiporter MnhC subunit
ABA1_00418	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABA1_00418	COG2111	Na H antiporter
ABA1_00421	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ABA1_00422	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABA1_00425	COG2226	methyltransferase
ABA1_00429	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
ABA1_00430	COG1074	ATP-dependent DNA helicase activity
ABA1_00431	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABA1_00436	COG0789	Transcriptional regulator
ABA1_00440	COG0598	Magnesium transport protein CorA
ABA1_00441	COG0789	Transcriptional regulator
ABA1_00442	COG0484	heat shock protein binding
ABA1_00445	COG0475	glutathione-regulated potassium exporter activity
ABA1_00445	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABA1_00446	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ABA1_00450	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABA1_00452	COG4535	Mg2 and Co2 transporter CorC
ABA1_00453	COG0425	Belongs to the sulfur carrier protein TusA family
ABA1_00455	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
ABA1_00455	COG0644	oxidoreductase
ABA1_00457	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABA1_00460	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABA1_00461	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
ABA1_00468	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ABA1_00471	COG0534	Mate efflux family protein
ABA1_00473	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABA1_00474	COG4221	oxidoreductase activity
ABA1_00475	COG0583	DNA-binding transcription factor activity
ABA1_00479	COG1530	ribonuclease E activity
ABA1_00481	COG0546	phosphoglycolate phosphatase activity
ABA1_00482	COG2378	regulation of single-species biofilm formation
ABA1_00483	COG0625	glutathione transferase activity
ABA1_00485	COG0583	DNA-binding transcription factor activity
ABA1_00496	COG0473	3-isopropylmalate dehydrogenase activity
ABA1_00507	COG1301	dicarboxylic acid transport
ABA1_00509	COG1560	Kdo2-lipid A biosynthetic process
ABA1_00510	COG1280	lysine exporter protein (LysE YggA)
ABA1_00514	COG1733	regulation of RNA biosynthetic process
ABA1_00519	COG0210	DNA helicase
ABA1_00520	COG0724	RNA recognition motif
ABA1_00524	COG4651	solute:proton antiporter activity
ABA1_00524	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABA1_00525	COG0267	Belongs to the bacterial ribosomal protein bL33 family
ABA1_00526	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ABA1_00529	COG0788	formyltetrahydrofolate deformylase activity
ABA1_00549	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABA1_00549	COG2813	Specifically methylates the guanine in position
ABA1_00551	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABA1_00553	COG4774	siderophore transport
ABA1_00555	COG0740	serine-type endopeptidase activity
ABA1_00559	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ABA1_00559	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ABA1_00560	COG0280	phosphate acetyltransferase
ABA1_00560	COG0857	belongs to the CobB CobQ family
ABA1_00561	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ABA1_00563	COG0800	Aldolase
ABA1_00565	COG3265	gluconokinase activity
ABA1_00566	COG1012	belongs to the aldehyde dehydrogenase family
ABA1_00568	COG2267	carboxylic ester hydrolase activity
ABA1_00571	COG0793	Belongs to the peptidase S41A family
ABA1_00578	COG1426	Protein conserved in bacteria
ABA1_00586	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ABA1_00588	COG1162	GTPase activity
ABA1_00589	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ABA1_00592	COG1538	Outer membrane efflux protein
ABA1_00593	COG1136	(ABC) transporter
ABA1_00593	COG0577	efflux transmembrane transporter activity
ABA1_00594	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABA1_00599	COG0028	Belongs to the TPP enzyme family
ABA1_00600	COG0440	acetolactate synthase activity
ABA1_00606	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
ABA1_00609	COG0084	hydrolase, TatD family'
ABA1_00611	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ABA1_00612	COG0583	DNA-binding transcription factor activity
ABA1_00614	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABA1_00631	COG2205	protein histidine kinase activity
ABA1_00634	COG2132	Multicopper oxidase
ABA1_00638	COG2814	Major facilitator Superfamily
ABA1_00640	COG0697	spore germination
ABA1_00641	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ABA1_00642	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ABA1_00643	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
ABA1_00646	COG3622	Belongs to the hyi family
ABA1_00647	COG2084	Dehydrogenase
ABA1_00648	COG1024	Enoyl-CoA hydratase
ABA1_00649	COG5002	protein histidine kinase activity
ABA1_00649	COG0784	Response regulator, receiver
ABA1_00649	COG2205	protein histidine kinase activity
ABA1_00653	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABA1_00655	COG3956	TIGRFAM MazG family protein
ABA1_00656	COG1555	photosystem II stabilization
ABA1_00657	COG0617	tRNA 3'-terminal CCA addition
ABA1_00658	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ABA1_00662	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABA1_00663	COG3028	Belongs to the UPF0307 family
ABA1_00664	COG0318	PFAM AMP-dependent synthetase and ligase
ABA1_00667	COG0625	glutathione transferase activity
ABA1_00668	COG1238	metal cluster binding
ABA1_00671	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ABA1_00675	COG0072	phenylalanine-tRNA ligase activity
ABA1_00680	COG0248	Ppx GppA phosphatase
ABA1_00682	COG0037	tRNA processing
ABA1_00690	COG1764	response to oxidative stress
ABA1_00691	COG1846	Transcriptional regulator
ABA1_00693	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABA1_00705	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ABA1_00706	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ABA1_00707	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ABA1_00709	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ABA1_00720	COG1214	PFAM Peptidase M22, glycoprotease
ABA1_00723	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
ABA1_00725	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABA1_00726	COG0561	phosphatase activity
ABA1_00728	COG2132	Multicopper oxidase
ABA1_00729	COG3667	copper resistance
ABA1_00732	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABA1_00733	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ABA1_00734	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ABA1_00740	COG1063	alcohol dehydrogenase
ABA1_00741	COG0583	DNA-binding transcription factor activity
ABA1_00742	COG1960	acyl-CoA dehydrogenase activity
ABA1_00743	COG2814	Major facilitator Superfamily
ABA1_00744	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABA1_00746	COG1053	succinate dehydrogenase
ABA1_00747	COG0583	DNA-binding transcription factor activity
ABA1_00750	COG0583	DNA-binding transcription factor activity
ABA1_00752	COG1473	amidohydrolase
ABA1_00756	COG0583	DNA-binding transcription factor activity
ABA1_00758	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
ABA1_00759	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABA1_00760	COG1309	transcriptional regulator
ABA1_00766	COG0384	phenazine biosynthesis protein PhzF
ABA1_00768	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABA1_00771	COG0745	RESPONSE REGULATOR receiver
ABA1_00772	COG2205	protein histidine kinase activity
ABA1_00779	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
ABA1_00785	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABA1_00786	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABA1_00791	COG0583	DNA-binding transcription factor activity
ABA1_00795	COG0668	transmembrane transport
ABA1_00797	COG2081	HI0933 family
ABA1_00798	COG2515	1-aminocyclopropane-1-carboxylate deaminase
ABA1_00804	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABA1_00804	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABA1_00806	COG0489	protein tyrosine kinase activity
ABA1_00816	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABA1_00818	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ABA1_00821	COG0730	response to heat
ABA1_00823	COG1196	nuclear chromosome segregation
ABA1_00827	COG2223	nitrite transmembrane transporter activity
ABA1_00828	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
ABA1_00829	COG1877	trehalose-phosphatase activity
ABA1_00830	COG0596	Alpha beta hydrolase
ABA1_00830	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABA1_00830	COG2226	methyltransferase
ABA1_00833	COG4106	trans-aconitate 2-methyltransferase activity
ABA1_00836	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ABA1_00837	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ABA1_00838	COG0009	L-threonylcarbamoyladenylate synthase
ABA1_00839	COG3101	peptidyl-lysine hydroxylation
ABA1_00840	COG1399	metal-binding, possibly nucleic acid-binding protein
ABA1_00845	COG1652	LysM domain
ABA1_00846	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ABA1_00846	COG0351	phosphomethylpyrimidine kinase
ABA1_00846	COG0352	thiamine-phosphate diphosphorylase activity
ABA1_00848	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABA1_00854	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABA1_00859	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
ABA1_00862	COG0358	DNA primase activity
ABA1_00864	COG0564	pseudouridine synthase activity
ABA1_00869	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABA1_00872	COG0583	DNA-binding transcription factor activity
ABA1_00873	COG0473	3-isopropylmalate dehydrogenase activity
ABA1_00877	COG1012	belongs to the aldehyde dehydrogenase family
ABA1_00881	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABA1_00881	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ABA1_00893	COG0456	acetyltransferase
ABA1_00895	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
ABA1_00896	COG0492	ferredoxin-NADP+ reductase activity
ABA1_00897	COG1674	ftsk spoiiie
ABA1_00897	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ABA1_00898	COG1280	lysine exporter protein (LysE YggA)
ABA1_00901	COG2894	cell division
ABA1_00904	COG0204	Acyl-transferase
ABA1_00905	COG2885	chlorophyll binding
ABA1_00906	COG0210	DNA helicase
ABA1_00908	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABA1_00911	COG0121	glutamine amidotransferase
ABA1_00915	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABA1_00916	COG0735	belongs to the Fur family
ABA1_00921	COG0420	3'-5' exonuclease activity
ABA1_00925	COG1090	epimerase
ABA1_00928	COG2050	protein possibly involved in aromatic compounds catabolism
ABA1_00930	COG2814	Major facilitator Superfamily
ABA1_00931	COG0405	Gamma-glutamyltransferase
ABA1_00937	COG0084	hydrolase, TatD family'
ABA1_00942	COG0477	Major facilitator Superfamily
ABA1_00943	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABA1_00948	COG0531	amino acid
ABA1_00949	COG2040	homocysteine
ABA1_00954	COG1309	transcriptional regulator
ABA1_00955	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABA1_00956	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABA1_00958	COG1607	acyl-coa hydrolase
ABA1_00960	COG0523	cobalamin synthesis protein
ABA1_00962	COG4681	YaeQ
ABA1_00964	COG1649	PFAM Uncharacterised BCR, COG1649
ABA1_00964	COG0726	polysaccharide deacetylase
ABA1_00965	COG1215	transferase activity, transferring glycosyl groups
ABA1_00967	COG1024	Enoyl-CoA hydratase
ABA1_00970	COG1414	Transcriptional regulator
ABA1_00974	COG1028	Short-chain dehydrogenase reductase Sdr
ABA1_00976	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABA1_00977	COG2271	Major facilitator Superfamily
ABA1_00979	COG2267	carboxylic ester hydrolase activity
ABA1_00980	COG1028	Short-chain dehydrogenase reductase Sdr
ABA1_00983	COG0028	Belongs to the TPP enzyme family
ABA1_00985	COG0477	Major facilitator Superfamily
ABA1_00987	COG0242	peptide deformylase activity
ABA1_00988	COG2066	Belongs to the glutaminase family
ABA1_00989	COG2207	Transcriptional regulator
ABA1_00990	COG2223	nitrite transmembrane transporter activity
ABA1_00993	COG0583	DNA-binding transcription factor activity
ABA1_00994	COG1028	Short-chain dehydrogenase reductase Sdr
ABA1_00995	COG2271	Major facilitator Superfamily
ABA1_00996	COG3959	Transketolase, thiamine diphosphate binding domain
ABA1_00997	COG3958	Transketolase
ABA1_00999	COG0306	phosphate transporter
ABA1_01003	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ABA1_01012	COG4181	ATPase activity
ABA1_01013	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
ABA1_01018	COG0583	DNA-binding transcription factor activity
ABA1_01020	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABA1_01021	COG1773	rubredoxin
ABA1_01031	COG2851	Citrate transporter
ABA1_01032	COG1253	flavin adenine dinucleotide binding
ABA1_01040	COG0804	urea catabolic process
ABA1_01042	COG0830	nickel cation binding
ABA1_01045	COG0742	ribosomal rna small subunit methyltransferase
ABA1_01046	COG0768	penicillin binding
ABA1_01050	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABA1_01051	COG2878	Part of a membrane complex involved in electron transport
ABA1_01052	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABA1_01054	COG3384	dioxygenase
ABA1_01057	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ABA1_01091	COG5410	chromosome segregation
ABA1_01114	COG0739	heme binding
ABA1_01126	COG1278	Cold shock
ABA1_01133	COG0006	proline dipeptidase activity
ABA1_01134	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABA1_01135	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABA1_01139	COG1279	arginine transmembrane transporter activity
ABA1_01140	COG0583	DNA-binding transcription factor activity
ABA1_01148	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABA1_01149	COG0741	lytic transglycosylase activity
ABA1_01149	COG1388	LysM domain
ABA1_01149	COG0741	lytic transglycosylase activity
ABA1_01149	COG1388	LysM domain
ABA1_01151	COG4174	ABC transporter (Permease)
ABA1_01152	COG4239	(ABC) transporter, permease
ABA1_01153	COG4172	Belongs to the ABC transporter superfamily
ABA1_01163	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABA1_01165	COG2203	Gaf domain
ABA1_01165	COG3706	GGDEF domain
ABA1_01165	COG4251	negative regulation of phosphorylation
ABA1_01165	COG5001	Diguanylate cyclase
ABA1_01167	COG1902	pentaerythritol trinitrate reductase activity
ABA1_01167	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABA1_01172	COG3501	Rhs element vgr protein
ABA1_01173	COG3209	COG3209 Rhs family protein
ABA1_01181	COG1113	amino acid transport
ABA1_01183	COG0531	amino acid
ABA1_01187	COG1012	belongs to the aldehyde dehydrogenase family
ABA1_01191	COG1113	amino acid transport
ABA1_01197	COG0697	spore germination
ABA1_01198	COG2721	sulfolactate sulfo-lyase activity
ABA1_01199	COG2271	Major facilitator Superfamily
ABA1_01200	COG4948	Mandelate Racemase Muconate Lactonizing
ABA1_01202	COG1012	belongs to the aldehyde dehydrogenase family
ABA1_01203	COG2186	Transcriptional regulator
ABA1_01208	COG1960	acyl-CoA dehydrogenase activity
ABA1_01210	COG1012	belongs to the aldehyde dehydrogenase family
ABA1_01211	COG1024	Enoyl-CoA hydratase
ABA1_01212	COG2814	Major facilitator Superfamily
ABA1_01215	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABA1_01224	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
ABA1_01225	COG2072	flavoprotein involved in K transport
ABA1_01226	COG0300	oxidoreductase activity
ABA1_01228	COG1309	transcriptional regulator
ABA1_01229	COG1741	Belongs to the pirin family
ABA1_01232	COG2072	flavoprotein involved in K transport
ABA1_01234	COG2252	PERMEase
ABA1_01235	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ABA1_01236	COG3038	cytochrome b561
ABA1_01238	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABA1_01242	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ABA1_01244	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ABA1_01247	COG0667	Aldo Keto reductase
ABA1_01249	COG1765	OsmC-like protein
ABA1_01259	COG2885	chlorophyll binding
ABA1_01261	COG0625	glutathione transferase activity
ABA1_01262	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ABA1_01266	COG3634	alkyl hydroperoxide reductase activity
ABA1_01268	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ABA1_01270	COG0450	alkyl hydroperoxide reductase
ABA1_01271	COG1643	Atp-dependent helicase
ABA1_01274	COG2814	Major facilitator Superfamily
ABA1_01275	COG3135	benzoate transporter
ABA1_01276	COG1028	Short-chain dehydrogenase reductase Sdr
ABA1_01277	COG0633	Ferredoxin
ABA1_01277	COG0543	2 iron, 2 sulfur cluster binding
ABA1_01278	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ABA1_01279	COG4638	Rieske (2fe-2S)
ABA1_01280	COG0583	DNA-binding transcription factor activity
ABA1_01290	COG1570	exodeoxyribonuclease VII activity
ABA1_01297	COG1280	lysine exporter protein (LysE YggA)
ABA1_01298	COG1278	Cold shock
ABA1_01305	COG2814	Major facilitator Superfamily
ABA1_01306	COG1733	regulation of RNA biosynthetic process
ABA1_01318	COG5410	chromosome segregation
ABA1_01319	COG3567	Phage-associated protein, HI1409 family
ABA1_01323	COG3566	protein conserved in bacteria
ABA1_01327	COG5434	Belongs to the glycosyl hydrolase 28 family
ABA1_01340	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ABA1_01342	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
ABA1_01343	COG1137	ATPase activity
ABA1_01344	COG1538	Outer membrane efflux protein
ABA1_01352	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ABA1_01355	COG1522	sequence-specific DNA binding
ABA1_01356	COG5006	permease, DMT superfamily
ABA1_01359	COG1560	Kdo2-lipid A biosynthetic process
ABA1_01361	COG2814	Major facilitator Superfamily
ABA1_01365	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABA1_01369	COG3501	Rhs element vgr protein
ABA1_01370	COG3209	COG3209 Rhs family protein
ABA1_01373	COG3209	COG3209 Rhs family protein
ABA1_01377	COG0583	DNA-binding transcription factor activity
ABA1_01378	COG1914	H( )-stimulated, divalent metal cation uptake system
ABA1_01382	COG4770	biotin carboxylase activity
ABA1_01383	COG0038	chloride channel
ABA1_01388	COG1309	transcriptional regulator
ABA1_01390	COG1063	alcohol dehydrogenase
ABA1_01393	COG0439	Biotin carboxylase
ABA1_01394	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABA1_01395	COG1733	regulation of RNA biosynthetic process
ABA1_01397	COG0864	Transcriptional regulator
ABA1_01399	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABA1_01400	COG1116	anion transmembrane transporter activity
ABA1_01413	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABA1_01413	COG2885	chlorophyll binding
ABA1_01421	COG0583	DNA-binding transcription factor activity
ABA1_01423	COG0590	tRNA wobble adenosine to inosine editing
ABA1_01424	COG2807	transmembrane transport
ABA1_01427	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ABA1_01429	COG0789	Transcriptional regulator
ABA1_01432	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABA1_01436	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABA1_01441	COG1012	belongs to the aldehyde dehydrogenase family
ABA1_01442	COG0531	amino acid
ABA1_01443	COG1760	l-serine dehydratase
ABA1_01444	COG2030	dehydratase
ABA1_01444	COG1012	belongs to the aldehyde dehydrogenase family
ABA1_01445	COG3396	Phenylacetate-CoA oxygenase
ABA1_01446	COG3460	Phenylacetate-CoA oxygenase
ABA1_01447	COG3396	Phenylacetate-CoA oxygenase
ABA1_01448	COG2151	metal-sulfur cluster biosynthetic enzyme
ABA1_01449	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABA1_01450	COG1024	Enoyl-CoA hydratase
ABA1_01451	COG1024	Enoyl-CoA hydratase
ABA1_01452	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABA1_01453	COG0183	Belongs to the thiolase family
ABA1_01454	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
ABA1_01455	COG3327	negative regulation of DNA-templated transcription, initiation
ABA1_01457	COG2050	protein possibly involved in aromatic compounds catabolism
ABA1_01458	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ABA1_01459	COG0210	DNA helicase
ABA1_01465	COG1278	Cold shock
ABA1_01471	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABA1_01472	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABA1_01473	COG2271	Major facilitator Superfamily
ABA1_01474	COG0753	catalase activity
ABA1_01475	COG3038	cytochrome b561
ABA1_01479	COG2267	carboxylic ester hydrolase activity
ABA1_01480	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABA1_01481	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABA1_01482	COG1012	belongs to the aldehyde dehydrogenase family
ABA1_01483	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ABA1_01485	COG1012	belongs to the aldehyde dehydrogenase family
ABA1_01486	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABA1_01487	COG0583	DNA-binding transcription factor activity
ABA1_01489	COG1414	Transcriptional regulator
ABA1_01490	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABA1_01492	COG1840	ABC-type Fe3 transport system, periplasmic component
ABA1_01493	COG3842	ATPase activity
ABA1_01496	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
ABA1_01497	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABA1_01498	COG2814	Major facilitator Superfamily
ABA1_01499	COG1960	acyl-CoA dehydrogenase activity
ABA1_01500	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABA1_01502	COG1024	Enoyl-CoA hydratase
ABA1_01504	COG2814	Major facilitator Superfamily
ABA1_01506	COG0183	Belongs to the thiolase family
ABA1_01507	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABA1_01508	COG1028	Short-chain dehydrogenase reductase Sdr
ABA1_01509	COG1024	Enoyl-CoA hydratase
ABA1_01510	COG1960	acyl-CoA dehydrogenase activity
ABA1_01511	COG2814	Major facilitator Superfamily
ABA1_01512	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABA1_01513	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABA1_01515	COG2814	Major facilitator Superfamily
ABA1_01517	COG1960	acyl-CoA dehydrogenase activity
ABA1_01520	COG0583	DNA-binding transcription factor activity
ABA1_01523	COG1024	Enoyl-CoA hydratase
ABA1_01524	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABA1_01525	COG1960	acyl-CoA dehydrogenase activity
ABA1_01526	COG1309	transcriptional regulator
ABA1_01527	COG0318	PFAM AMP-dependent synthetase and ligase
ABA1_01531	COG0583	DNA-binding transcription factor activity
ABA1_01542	COG1028	Short-chain dehydrogenase reductase Sdr
ABA1_01550	COG2205	protein histidine kinase activity
ABA1_01550	COG0784	Response regulator, receiver
ABA1_01553	COG0765	amino acid transport
ABA1_01554	COG0765	amino acid transport
ABA1_01555	COG1126	abc transporter atp-binding protein
ABA1_01556	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABA1_01557	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABA1_01559	COG1280	lysine exporter protein (LysE YggA)
ABA1_01560	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ABA1_01561	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABA1_01562	COG1045	serine acetyltransferase
ABA1_01565	COG0583	DNA-binding transcription factor activity
ABA1_01566	COG0625	glutathione transferase activity
ABA1_01567	COG0625	glutathione transferase activity
ABA1_01568	COG0583	DNA-binding transcription factor activity
ABA1_01570	COG1346	cytolysis
ABA1_01571	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABA1_01574	COG2814	Major facilitator Superfamily
ABA1_01576	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
ABA1_01577	COG3052	prosthetic group binding
ABA1_01581	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ABA1_01585	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABA1_01587	COG1294	oxidase, subunit
ABA1_01588	COG1271	oxidase subunit
ABA1_01592	COG0477	Major facilitator Superfamily
ABA1_01594	COG4521	taurine ABC transporter
ABA1_01595	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ABA1_01596	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABA1_01597	COG2175	clavaminate synthase activity
ABA1_01599	COG1953	Uracil, thiamine, allantoin
ABA1_01601	COG0583	DNA-binding transcription factor activity
ABA1_01603	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
ABA1_01606	COG0640	Transcriptional regulator
ABA1_01607	COG0798	PFAM Bile acid sodium symporter
ABA1_01608	COG0583	DNA-binding transcription factor activity
ABA1_01611	COG3634	alkyl hydroperoxide reductase activity
ABA1_01618	COG1301	dicarboxylic acid transport
ABA1_01619	COG0436	Aminotransferase
ABA1_01621	COG0386	Belongs to the glutathione peroxidase family
ABA1_01629	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABA1_01634	COG0012	GTP binding
ABA1_01635	COG2011	ABC-type metal ion transport system permease component
ABA1_01636	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABA1_01638	COG1464	Belongs to the NlpA lipoprotein family
ABA1_01644	COG0765	amino acid transport
ABA1_01645	COG0765	amino acid transport
ABA1_01646	COG1126	abc transporter atp-binding protein
ABA1_01648	COG1522	sequence-specific DNA binding
ABA1_01651	COG1309	transcriptional regulator
ABA1_01656	COG0583	DNA-binding transcription factor activity
ABA1_01658	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ABA1_01660	COG0697	spore germination
ABA1_01665	COG3121	Chaperone
ABA1_01666	COG3539	Fimbrial protein
ABA1_01671	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ABA1_01671	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ABA1_01680	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ABA1_01682	COG2353	YceI-like domain
ABA1_01684	COG3698	Phosphodiester glycosidase
ABA1_01687	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
ABA1_01688	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABA1_01688	COG0506	proline dehydrogenase activity
ABA1_01688	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABA1_01690	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABA1_01691	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ABA1_01695	COG1132	(ABC) transporter
ABA1_01696	COG3122	Protein conserved in bacteria
ABA1_01697	COG3619	membrane
ABA1_01699	COG0640	Transcriptional regulator
ABA1_01701	COG2850	peptidyl-arginine hydroxylation
ABA1_01702	COG0424	maF-like protein
ABA1_01706	COG0191	fructose-bisphosphate aldolase activity
ABA1_01707	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABA1_01710	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ABA1_01712	COG1192	Involved in chromosome partitioning
ABA1_01713	COG1475	DNA binding
ABA1_01714	COG0811	peptide transport
ABA1_01716	COG1132	(ABC) transporter
ABA1_01717	COG1663	tetraacyldisaccharide 4'-kinase activity
ABA1_01721	COG0084	hydrolase, TatD family'
ABA1_01730	COG0590	tRNA wobble adenosine to inosine editing
ABA1_01734	COG0776	regulation of translation
ABA1_01740	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ABA1_01741	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ABA1_01745	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
ABA1_01750	COG0339	signal peptide processing
ABA1_01752	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABA1_01759	COG0702	epimerase
ABA1_01760	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABA1_01764	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ABA1_01770	COG0316	Belongs to the HesB IscA family
ABA1_01771	COG0822	iron-sulfur transferase activity
ABA1_01776	COG0776	regulation of translation
ABA1_01777	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABA1_01778	COG2207	Transcriptional regulator
ABA1_01779	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABA1_01780	COG1960	acyl-CoA dehydrogenase activity
ABA1_01781	COG1960	acyl-CoA dehydrogenase activity
ABA1_01784	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ABA1_01787	COG2814	Major facilitator Superfamily
ABA1_01788	COG4264	IucA IucC family
ABA1_01789	COG4264	IucA IucC family
ABA1_01791	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABA1_01797	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABA1_01800	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
ABA1_01801	COG0406	alpha-ribazole phosphatase activity
ABA1_01804	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ABA1_01805	COG0730	response to heat
ABA1_01809	COG4773	Receptor
ABA1_01810	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABA1_01821	COG2226	methyltransferase
ABA1_01826	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ABA1_01833	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABA1_01835	COG0133	tryptophan synthase activity
ABA1_01838	COG3706	GGDEF domain
ABA1_01841	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABA1_01842	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ABA1_01843	COG0022	dehydrogenase e1 component
ABA1_01844	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABA1_01845	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABA1_01847	COG1063	alcohol dehydrogenase
ABA1_01848	COG3781	membrane
ABA1_01850	COG3453	Protein conserved in bacteria
ABA1_01850	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABA1_01852	COG0730	response to heat
ABA1_01855	COG2207	Transcriptional regulator
ABA1_01855	COG3708	Transcriptional regulator
ABA1_01856	COG1733	regulation of RNA biosynthetic process
ABA1_01857	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ABA1_01862	COG4521	taurine ABC transporter
ABA1_01863	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABA1_01867	COG0477	Major facilitator Superfamily
ABA1_01869	COG1027	Aspartate ammonia-lyase
ABA1_01872	COG0583	DNA-binding transcription factor activity
ABA1_01873	COG0583	DNA-binding transcription factor activity
ABA1_01874	COG0183	Belongs to the thiolase family
ABA1_01875	COG2031	fatty acid transporter
ABA1_01878	COG0583	DNA-binding transcription factor activity
ABA1_01880	COG2610	gluconate transmembrane transporter activity
ABA1_01881	COG1028	Short-chain dehydrogenase reductase Sdr
ABA1_01882	COG2207	Transcriptional regulator
ABA1_01884	COG0412	Dienelactone hydrolase
ABA1_01885	COG1028	Short-chain dehydrogenase reductase Sdr
ABA1_01887	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABA1_01890	COG0543	2 iron, 2 sulfur cluster binding
ABA1_01890	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABA1_01891	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ABA1_01892	COG4638	Rieske (2fe-2S)
ABA1_01894	COG0725	ABC transporter, periplasmic molybdate-binding protein
ABA1_01895	COG4149	molybdate abc transporter
ABA1_01896	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
ABA1_01897	COG1028	Short-chain dehydrogenase reductase Sdr
ABA1_01898	COG1535	isochorismatase
ABA1_01898	COG3433	isochorismatase activity
ABA1_01910	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABA1_01913	COG0753	catalase activity
ABA1_01915	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
ABA1_01920	COG3539	Fimbrial protein
ABA1_01924	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABA1_01926	COG2072	flavoprotein involved in K transport
ABA1_01928	COG1538	Outer membrane efflux protein
ABA1_01929	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABA1_01930	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABA1_01931	COG0745	RESPONSE REGULATOR receiver
ABA1_01932	COG2205	protein histidine kinase activity
ABA1_01934	COG2207	Transcriptional regulator
ABA1_01937	COG1028	Short-chain dehydrogenase reductase Sdr
ABA1_01939	COG1073	alpha beta
ABA1_01945	COG0556	nucleotide-excision repair
ABA1_01948	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
ABA1_01961	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABA1_01963	COG2207	Transcriptional regulator
ABA1_01964	COG2084	Dehydrogenase
ABA1_01966	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABA1_01967	COG0583	DNA-binding transcription factor activity
ABA1_01969	COG0129	dihydroxy-acid dehydratase activity
ABA1_01970	COG1012	belongs to the aldehyde dehydrogenase family
ABA1_01973	COG1566	PFAM secretion protein HlyD family protein
ABA1_01976	COG0583	DNA-binding transcription factor activity
ABA1_01993	COG1473	amidohydrolase
ABA1_01995	COG0475	glutathione-regulated potassium exporter activity
ABA1_01995	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABA1_01997	COG0583	DNA-binding transcription factor activity
ABA1_01998	COG1335	isochorismatase
ABA1_02003	COG1902	pentaerythritol trinitrate reductase activity
ABA1_02005	COG4689	acetoacetate decarboxylase
ABA1_02006	COG1028	Short-chain dehydrogenase reductase Sdr
ABA1_02008	COG1309	transcriptional regulator
ABA1_02016	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABA1_02016	COG1902	pentaerythritol trinitrate reductase activity
ABA1_02019	COG1012	belongs to the aldehyde dehydrogenase family
ABA1_02023	COG2186	Transcriptional regulator
ABA1_02025	COG0583	DNA-binding transcription factor activity
ABA1_02026	COG4948	Mandelate Racemase Muconate Lactonizing
ABA1_02027	COG4829	muconolactone delta-isomerase
ABA1_02029	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABA1_02030	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABA1_02031	COG0183	Belongs to the thiolase family
ABA1_02032	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABA1_02034	COG1012	belongs to the aldehyde dehydrogenase family
ABA1_02036	COG3733	amine oxidase
ABA1_02038	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABA1_02040	COG1028	Short-chain dehydrogenase reductase Sdr
ABA1_02042	COG4638	Rieske (2fe-2S)
ABA1_02046	COG0154	amidase activity
ABA1_02048	COG2814	Major facilitator Superfamily
ABA1_02053	COG1960	acyl-CoA dehydrogenase activity
ABA1_02054	COG0583	DNA-binding transcription factor activity
ABA1_02055	COG1414	Transcriptional regulator
ABA1_02058	COG2391	methyltransferase activity
ABA1_02060	COG4993	Dehydrogenase
ABA1_02061	COG3659	wide pore channel activity
ABA1_02062	COG3420	alginic acid biosynthetic process
ABA1_02063	COG0710	3-dehydroquinate dehydratase activity
ABA1_02064	COG3485	protocatechuate 3,4-dioxygenase
ABA1_02065	COG3485	protocatechuate 3,4-dioxygenase
ABA1_02066	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABA1_02067	COG2271	Major facilitator Superfamily
ABA1_02068	COG0596	Alpha beta hydrolase
ABA1_02069	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ABA1_02070	COG0183	Belongs to the thiolase family
ABA1_02071	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABA1_02072	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABA1_02074	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
ABA1_02075	COG2323	membrane
ABA1_02084	COG1902	pentaerythritol trinitrate reductase activity
ABA1_02084	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABA1_02087	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ABA1_02089	COG0542	response to heat
ABA1_02090	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
ABA1_02096	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABA1_02097	COG0569	domain protein
ABA1_02098	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABA1_02101	COG4774	siderophore transport
ABA1_02102	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABA1_02104	COG1585	Membrane protein implicated in regulation of membrane protease activity
ABA1_02107	COG1294	oxidase, subunit
ABA1_02108	COG4890	Cyd operon protein YbgT
ABA1_02110	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
ABA1_02112	COG0552	protein localization to endoplasmic reticulum
ABA1_02117	COG0516	GMP reductase activity
ABA1_02117	COG0517	IMP dehydrogenase activity
ABA1_02118	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABA1_02119	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ABA1_02121	COG0583	DNA-binding transcription factor activity
ABA1_02122	COG0024	Methionine aminopeptidase
ABA1_02128	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABA1_02128	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABA1_02129	COG1105	Belongs to the carbohydrate kinase PfkB family
ABA1_02130	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
ABA1_02130	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABA1_02130	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABA1_02134	COG3300	MHYT domain
ABA1_02134	COG5001	Diguanylate cyclase
ABA1_02137	COG2135	peptidase activity
ABA1_02138	COG0659	secondary active sulfate transmembrane transporter activity
ABA1_02141	COG1113	amino acid transport
ABA1_02143	COG1522	sequence-specific DNA binding
ABA1_02148	COG1011	Hydrolase
ABA1_02149	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ABA1_02151	COG2137	regulation of response to DNA damage stimulus
ABA1_02153	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABA1_02160	COG0575	Belongs to the CDS family
ABA1_02161	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ABA1_02165	COG3852	Histidine kinase
ABA1_02166	COG2204	response regulator
ABA1_02177	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABA1_02178	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
ABA1_02182	COG0697	spore germination
ABA1_02185	COG0303	'Molybdopterin
ABA1_02186	COG0315	cyclic pyranopterin monophosphate synthase activity
ABA1_02186	COG0521	Mo-molybdopterin cofactor biosynthetic process
ABA1_02189	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ABA1_02190	COG0243	molybdopterin cofactor binding
ABA1_02192	COG0243	molybdopterin cofactor binding
ABA1_02193	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABA1_02194	COG2146	nitrite reductase [NAD(P)H] activity
ABA1_02194	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABA1_02196	COG0745	RESPONSE REGULATOR receiver
ABA1_02197	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABA1_02197	COG1116	anion transmembrane transporter activity
ABA1_02200	COG0511	ligase activity, forming carbon-carbon bonds
ABA1_02203	COG2814	Major facilitator Superfamily
ABA1_02207	COG0069	glutamate synthase activity
ABA1_02211	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABA1_02213	COG1454	alcohol dehydrogenase
ABA1_02214	COG0824	Thioesterase
ABA1_02217	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABA1_02223	COG0183	Belongs to the thiolase family
ABA1_02225	COG0583	DNA-binding transcription factor activity
ABA1_02228	COG1522	sequence-specific DNA binding
ABA1_02229	COG3135	benzoate transporter
ABA1_02231	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
ABA1_02235	COG0589	response to stress
ABA1_02236	COG0488	(ABC) transporter
ABA1_02240	COG4773	Receptor
ABA1_02246	COG0668	transmembrane transport
ABA1_02248	COG1309	transcriptional regulator
ABA1_02251	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
ABA1_02254	COG1605	Chorismate mutase
ABA1_02262	COG0308	aminopeptidase N
ABA1_02267	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABA1_02268	COG1454	alcohol dehydrogenase
ABA1_02272	COG0531	amino acid
ABA1_02273	COG4303	Ethanolamine ammonia lyase large subunit
ABA1_02274	COG4302	ethanolamine ammonia-lyase activity
ABA1_02275	COG0519	Catalyzes the synthesis of GMP from XMP
ABA1_02275	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABA1_02280	COG0697	spore germination
ABA1_02281	COG1923	regulation of RNA biosynthetic process
ABA1_02283	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ABA1_02284	COG0802	atpase or kinase
ABA1_02288	COG1187	pseudouridine synthase activity
ABA1_02291	COG0583	DNA-binding transcription factor activity
ABA1_02294	COG2814	Major facilitator Superfamily
ABA1_02295	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABA1_02300	COG0729	surface antigen
ABA1_02304	COG0174	glutamine synthetase
ABA1_02305	COG0745	RESPONSE REGULATOR receiver
ABA1_02306	COG2205	protein histidine kinase activity
ABA1_02308	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
ABA1_02309	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ABA1_02314	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABA1_02315	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABA1_02316	COG1960	acyl-CoA dehydrogenase activity
ABA1_02319	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABA1_02320	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABA1_02324	COG0583	DNA-binding transcription factor activity
ABA1_02327	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABA1_02329	COG3658	cytochrome
ABA1_02330	COG1215	transferase activity, transferring glycosyl groups
ABA1_02331	COG1649	PFAM Uncharacterised BCR, COG1649
ABA1_02331	COG0726	polysaccharide deacetylase
ABA1_02336	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ABA1_02337	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABA1_02339	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ABA1_02344	COG0305	Participates in initiation and elongation during chromosome replication
ABA1_02345	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABA1_02347	COG1305	Transglutaminase-like
ABA1_02349	COG2308	Evidence 4 Homologs of previously reported genes of
ABA1_02355	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
ABA1_02356	COG0138	bifunctional purine biosynthesis protein purh
ABA1_02357	COG0151	Belongs to the GarS family
ABA1_02358	COG1464	Belongs to the NlpA lipoprotein family
ABA1_02359	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABA1_02360	COG2011	ABC-type metal ion transport system permease component
ABA1_02361	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABA1_02363	COG1301	dicarboxylic acid transport
ABA1_02369	COG1794	racemase activity, acting on amino acids and derivatives
ABA1_02373	COG0745	RESPONSE REGULATOR receiver
ABA1_02374	COG0642	Histidine kinase
ABA1_02375	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ABA1_02377	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ABA1_02385	COG2351	hydroxyisourate hydrolase activity
ABA1_02387	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ABA1_02387	COG3008	intermembrane lipid transfer
ABA1_02388	COG2995	paraquat-inducible protein a
ABA1_02392	COG0477	Major facilitator Superfamily
ABA1_02404	COG2186	Transcriptional regulator
ABA1_02407	COG1028	Short-chain dehydrogenase reductase Sdr
ABA1_02409	COG0583	DNA-binding transcription factor activity
ABA1_02411	COG0786	glutamate:sodium symporter activity
ABA1_02412	COG3243	poly(R)-hydroxyalkanoic acid synthase
ABA1_02417	COG3111	PFAM Bacterial OB fold (BOF) protein
ABA1_02436	COG0828	Belongs to the bacterial ribosomal protein bS21 family
ABA1_02437	COG1610	YqeY-like protein
ABA1_02438	COG4783	chaperone-mediated protein folding
ABA1_02443	COG1286	toxin biosynthetic process
ABA1_02449	COG0778	Nitroreductase
ABA1_02451	COG0513	Belongs to the DEAD box helicase family
ABA1_02455	COG2363	Small membrane protein
ABA1_02460	COG1234	tRNA 3'-trailer cleavage
ABA1_02461	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABA1_02463	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ABA1_02465	COG2819	hydrolase of the alpha beta superfamily
ABA1_02466	COG1960	acyl-CoA dehydrogenase activity
ABA1_02467	COG1301	dicarboxylic acid transport
ABA1_02468	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ABA1_02469	COG3139	Protein of unknown function (DUF1315)
ABA1_02470	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ABA1_02471	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABA1_02473	COG0494	nUDIX hydrolase
ABA1_02475	COG0642	Histidine kinase
ABA1_02476	COG0745	RESPONSE REGULATOR receiver
ABA1_02480	COG1720	tRNA m6t6A37 methyltransferase activity
ABA1_02483	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABA1_02485	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABA1_02487	COG4598	ABC transporter
ABA1_02488	COG4160	amino acid transport
ABA1_02489	COG4215	(ABC) transporter
ABA1_02492	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABA1_02494	COG1538	Outer membrane efflux protein
ABA1_02513	COG0739	heme binding
ABA1_02536	COG5410	chromosome segregation
ABA1_02556	COG0305	Participates in initiation and elongation during chromosome replication
ABA1_02568	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABA1_02576	COG0582	viral genome integration into host DNA
ABA1_02577	COG1131	(ABC) transporter
ABA1_02578	COG0842	Transport permease protein
ABA1_02581	COG0772	Belongs to the SEDS family
ABA1_02582	COG2951	lytic endotransglycosylase activity
ABA1_02587	COG2207	Transcriptional regulator
ABA1_02590	COG0052	Belongs to the universal ribosomal protein uS2 family
ABA1_02591	COG0024	Methionine aminopeptidase
ABA1_02593	COG2223	nitrite transmembrane transporter activity
ABA1_02596	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABA1_02597	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABA1_02598	COG1960	acyl-CoA dehydrogenase activity
ABA1_02601	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ABA1_02602	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ABA1_02603	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABA1_02607	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABA1_02608	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABA1_02609	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ABA1_02616	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
ABA1_02619	COG3104	oligopeptide transport
ABA1_02621	COG0512	Glutamine amidotransferase of anthranilate synthase
ABA1_02622	COG0308	aminopeptidase N
ABA1_02628	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ABA1_02634	COG3739	integral membrane protein
ABA1_02637	COG1169	isochorismate synthase
ABA1_02639	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
ABA1_02641	COG1132	(ABC) transporter
ABA1_02644	COG1535	isochorismatase
ABA1_02644	COG3433	isochorismatase activity
ABA1_02645	COG1021	2,3-dihydroxybenzoate-AMP ligase
ABA1_02646	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABA1_02648	COG4774	siderophore transport
ABA1_02649	COG4607	ABC-type enterochelin transport system periplasmic component
ABA1_02650	COG4604	ABC transporter, ATP-binding protein
ABA1_02651	COG4605	iron ion homeostasis
ABA1_02652	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABA1_02655	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABA1_02658	COG2964	Protein conserved in bacteria
ABA1_02660	COG1741	Belongs to the pirin family
ABA1_02671	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
ABA1_02671	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABA1_02672	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABA1_02675	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABA1_02676	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABA1_02677	COG0006	proline dipeptidase activity
ABA1_02678	COG0583	DNA-binding transcription factor activity
ABA1_02680	COG2879	small protein
ABA1_02681	COG1966	Carbon starvation protein
ABA1_02685	COG4943	cyclic-guanylate-specific phosphodiesterase activity
ABA1_02690	COG1067	ATP-dependent peptidase activity
ABA1_02691	COG0583	DNA-binding transcription factor activity
ABA1_02696	COG1686	Belongs to the peptidase S11 family
ABA1_02697	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ABA1_02704	COG0616	signal peptide processing
ABA1_02705	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ABA1_02707	COG0573	inorganic phosphate transmembrane transporter activity
ABA1_02708	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ABA1_02709	COG1113	amino acid transport
ABA1_02710	COG3961	Belongs to the TPP enzyme family
ABA1_02711	COG1522	sequence-specific DNA binding
ABA1_02713	COG0076	glutamate decarboxylase activity
ABA1_02714	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABA1_02716	COG1309	transcriptional regulator
ABA1_02719	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABA1_02726	COG0352	thiamine-phosphate diphosphorylase activity
ABA1_02732	COG1203	CRISPR-associated helicase, Cas3
ABA1_02738	COG0612	Peptidase, M16
ABA1_02741	COG0583	DNA-binding transcription factor activity
ABA1_02742	COG0477	Major facilitator Superfamily
ABA1_02747	COG1187	pseudouridine synthase activity
ABA1_02750	COG1686	Belongs to the peptidase S11 family
ABA1_02751	COG1252	NADH dehydrogenase
ABA1_02753	COG0415	Belongs to the DNA photolyase family
ABA1_02756	COG1215	transferase activity, transferring glycosyl groups
ABA1_02762	COG2070	2-Nitropropane dioxygenase
ABA1_02773	COG0556	nucleotide-excision repair
ABA1_02782	COG4221	oxidoreductase activity
ABA1_02784	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ABA1_02785	COG1381	Involved in DNA repair and RecF pathway recombination
ABA1_02787	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ABA1_02790	COG0681	Belongs to the peptidase S26 family
ABA1_02793	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABA1_02797	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ABA1_02798	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ABA1_02799	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ABA1_02801	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ABA1_02802	COG4208	sulfate ABC transporter
ABA1_02803	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ABA1_02804	COG0583	DNA-binding transcription factor activity
ABA1_02805	COG4625	pathogenesis
ABA1_02808	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ABA1_02811	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ABA1_02813	COG1056	cytidyltransferase-related domain
ABA1_02813	COG1051	belongs to the nudix hydrolase family
ABA1_02814	COG1024	Enoyl-CoA hydratase
ABA1_02815	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABA1_02817	COG2814	Major facilitator Superfamily
ABA1_02818	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABA1_02818	COG0047	phosphoribosylformylglycinamidine synthase activity
ABA1_02822	COG1473	amidohydrolase
ABA1_02823	COG0824	Thioesterase
ABA1_02827	COG0823	Involved in the tonB-independent uptake of proteins
ABA1_02831	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABA1_02838	COG0628	permease
ABA1_02840	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ABA1_02841	COG0596	Alpha beta hydrolase
ABA1_02842	COG0616	signal peptide processing
ABA1_02842	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ABA1_02844	COG2333	competence protein COMEC
ABA1_02844	COG0658	competence protein
ABA1_02845	COG1136	(ABC) transporter
ABA1_02846	COG4591	ABC-type transport system involved in lipoprotein release permease component
ABA1_02853	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABA1_02857	COG0463	Glycosyl transferase, family 2
ABA1_02863	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ABA1_02864	COG1280	lysine exporter protein (LysE YggA)
ABA1_02865	COG2267	carboxylic ester hydrolase activity
ABA1_02867	COG0019	diaminopimelate decarboxylase activity
ABA1_02869	COG1113	amino acid transport
ABA1_02872	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
ABA1_02874	COG3339	Conserved Protein
ABA1_02875	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
ABA1_02876	COG0243	molybdopterin cofactor binding
ABA1_02877	COG1929	Belongs to the glycerate kinase type-1 family
ABA1_02880	COG0778	Nitroreductase
ABA1_02887	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABA1_02890	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABA1_02894	COG0741	lytic transglycosylase activity
ABA1_02898	COG0584	glycerophosphoryl diester phosphodiesterase
ABA1_02899	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABA1_02904	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABA1_02908	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ABA1_02909	COG0477	Major facilitator Superfamily
ABA1_02919	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ABA1_02920	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABA1_02925	COG0505	Belongs to the CarA family
ABA1_02929	COG0589	response to stress
ABA1_02932	COG2843	Capsule synthesis protein
ABA1_02936	COG2321	neutral zinc metallopeptidase
ABA1_02937	COG2354	Protein conserved in bacteria
ABA1_02943	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABA1_02946	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ABA1_02947	COG1053	succinate dehydrogenase
ABA1_02948	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ABA1_02949	COG2009	succinate dehydrogenase
ABA1_02956	COG2921	Belongs to the UPF0250 family
ABA1_02957	COG0321	lipoyl(octanoyl) transferase activity
ABA1_02960	COG0531	amino acid
ABA1_02962	COG1733	regulation of RNA biosynthetic process
ABA1_02963	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ABA1_02964	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ABA1_02964	COG1648	precorrin-2 dehydrogenase activity
ABA1_02967	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ABA1_02972	COG0671	phosphoesterase, PA-phosphatase related
ABA1_02973	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABA1_02975	COG1538	Outer membrane efflux protein
ABA1_02976	COG0393	Putative heavy-metal-binding
ABA1_02977	COG0393	Putative heavy-metal-binding
ABA1_02979	COG1028	Short-chain dehydrogenase reductase Sdr
ABA1_02981	COG0525	valine-tRNA ligase activity
ABA1_02985	COG0583	DNA-binding transcription factor activity
ABA1_02986	COG0004	ammonium transporteR
ABA1_02988	COG0642	Histidine kinase
ABA1_02989	COG0745	RESPONSE REGULATOR receiver
ABA1_02990	COG2194	sulfuric ester hydrolase activity
ABA1_02994	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABA1_02997	COG2315	Protein conserved in bacteria
ABA1_02998	COG0142	geranyltranstransferase activity
ABA1_02999	COG2828	Protein conserved in bacteria
ABA1_03000	COG1113	amino acid transport
ABA1_03002	COG0582	viral genome integration into host DNA
ABA1_03080	COG2207	Transcriptional regulator
ABA1_03085	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABA1_03089	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABA1_03091	COG1530	ribonuclease E activity
ABA1_03092	COG0424	maF-like protein
ABA1_03093	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
ABA1_03094	COG1792	Involved in formation and maintenance of cell shape
ABA1_03095	COG1077	Cell shape determining protein MreB Mrl
ABA1_03096	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABA1_03098	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABA1_03103	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
ABA1_03104	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABA1_03105	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABA1_03106	COG1115	amino acid carrier protein
ABA1_03109	COG2814	Major facilitator Superfamily
ABA1_03110	COG1289	transmembrane transporter activity
ABA1_03120	COG1376	ErfK ybiS ycfS ynhG family protein
ABA1_03121	COG2832	Protein of unknown function (DUF454)
ABA1_03123	COG5510	response to toxic substance
ABA1_03126	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABA1_03129	COG0840	transmembrane signaling receptor activity
ABA1_03137	COG3422	double-strand break repair
ABA1_03138	COG2824	Alkylphosphonate utilization operon protein PhnA
ABA1_03139	COG3189	MarR family transcriptional regulator
ABA1_03141	COG0354	folic acid binding
ABA1_03142	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABA1_03144	COG0679	Auxin Efflux Carrier
ABA1_03145	COG1902	pentaerythritol trinitrate reductase activity
ABA1_03146	COG4772	TonB-dependent receptor
ABA1_03147	COG2094	Belongs to the DNA glycosylase MPG family
ABA1_03153	COG2233	PERMEase
ABA1_03155	COG0833	amino acid
ABA1_03156	COG1690	Belongs to the RtcB family
ABA1_03158	COG2885	chlorophyll binding
ABA1_03158	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABA1_03160	COG0183	Belongs to the thiolase family
ABA1_03164	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABA1_03168	COG2207	Transcriptional regulator
ABA1_03169	COG0183	Belongs to the thiolase family
ABA1_03173	COG2153	protein acetylation
ABA1_03175	COG1272	protein, Hemolysin III
ABA1_03176	COG0477	Major facilitator Superfamily
ABA1_03179	COG0450	alkyl hydroperoxide reductase
ABA1_03183	COG0285	dihydrofolate synthase activity
ABA1_03190	COG0133	tryptophan synthase activity
ABA1_03193	COG2096	Adenosyltransferase
ABA1_03197	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ABA1_03198	COG0745	RESPONSE REGULATOR receiver
ABA1_03199	COG2205	protein histidine kinase activity
ABA1_03201	COG1960	acyl-CoA dehydrogenase activity
ABA1_03202	COG1960	acyl-CoA dehydrogenase activity
ABA1_03214	COG0438	transferase activity, transferring glycosyl groups
ABA1_03215	COG0463	Glycosyl transferase, family 2
ABA1_03216	COG0726	polysaccharide deacetylase
ABA1_03220	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
ABA1_03221	COG2205	protein histidine kinase activity
ABA1_03228	COG1862	Preprotein translocase
ABA1_03231	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ABA1_03233	COG3781	membrane
ABA1_03234	COG0613	PHP domain protein
ABA1_03236	COG2350	Protein conserved in bacteria
ABA1_03242	COG1607	acyl-coa hydrolase
ABA1_03245	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABA1_03245	COG3453	Protein conserved in bacteria
ABA1_03254	COG2199	diguanylate cyclase activity
ABA1_03256	COG1408	metallophosphoesterase
ABA1_03257	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABA1_03259	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ABA1_03263	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ABA1_03264	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ABA1_03267	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ABA1_03269	COG2969	positive regulation of protein catabolic process
ABA1_03273	COG1960	acyl-CoA dehydrogenase activity
ABA1_03274	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABA1_03277	COG1309	transcriptional regulator
ABA1_03278	COG1960	acyl-CoA dehydrogenase activity
ABA1_03287	COG1183	phosphatidylcholine synthase activity
ABA1_03288	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ABA1_03294	COG0739	heme binding
ABA1_03294	COG0741	lytic transglycosylase activity
ABA1_03294	COG1196	nuclear chromosome segregation
ABA1_03296	COG1702	phosphate starvation-inducible protein PhoH
ABA1_03303	COG1295	ribonuclease BN
ABA1_03304	COG0697	spore germination
ABA1_03305	COG2169	Transcriptional regulator
ABA1_03306	COG0179	Fumarylacetoacetate (FAA) hydrolase
ABA1_03315	COG0557	exoribonuclease II activity
ABA1_03316	COG0339	signal peptide processing
ABA1_03317	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
ABA1_03324	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
ABA1_03325	COG1960	acyl-CoA dehydrogenase activity
ABA1_03330	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ABA1_03332	COG0257	Belongs to the bacterial ribosomal protein bL36 family
ABA1_03356	COG0626	cystathionine gamma-synthase activity
ABA1_03357	COG0433	COG0433 Predicted ATPase
ABA1_03358	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABA1_03358	COG1017	nitric oxide dioxygenase activity
ABA1_03359	COG1959	2 iron, 2 sulfur cluster binding
ABA1_03362	COG1301	dicarboxylic acid transport
ABA1_03363	COG1946	Acyl-CoA thioesterase
ABA1_03367	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ABA1_03368	COG1040	competence protein
ABA1_03369	COG0494	nUDIX hydrolase
ABA1_03371	COG0598	Magnesium transport protein CorA
ABA1_03373	COG2854	intermembrane phospholipid transfer
ABA1_03375	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ABA1_03376	COG1127	ABC transporter
ABA1_03378	COG0513	Belongs to the DEAD box helicase family
ABA1_03382	COG0408	coproporphyrinogen oxidase activity
ABA1_03385	COG1960	acyl-CoA dehydrogenase activity
ABA1_03387	COG1983	PspC domain protein
ABA1_03388	COG0517	IMP dehydrogenase activity
ABA1_03398	COG0583	DNA-binding transcription factor activity
ABA1_03406	COG1012	belongs to the aldehyde dehydrogenase family
ABA1_03408	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABA1_03409	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABA1_03410	COG0833	amino acid
ABA1_03417	COG0628	permease
ABA1_03419	COG1289	transmembrane transporter activity
ABA1_03422	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABA1_03423	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
ABA1_03425	COG0277	FAD linked oxidase domain protein
ABA1_03426	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABA1_03431	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ABA1_03432	COG5380	lipid catabolic process
ABA1_03436	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ABA1_03446	COG0194	GDP metabolic process
ABA1_03448	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABA1_03452	COG3307	-O-antigen
ABA1_03455	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
ABA1_03456	COG1704	LemA family
ABA1_03458	COG0493	'glutamate synthase
ABA1_03459	COG0067	glutamate synthase
ABA1_03459	COG0070	glutamate synthase
ABA1_03459	COG0069	glutamate synthase activity
ABA1_03469	COG2226	methyltransferase
ABA1_03472	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ABA1_03473	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABA1_03482	COG0833	amino acid
ABA1_03495	COG0488	(ABC) transporter
ABA1_03497	COG4221	oxidoreductase activity
ABA1_03498	COG0659	secondary active sulfate transmembrane transporter activity
ABA1_03500	COG0745	RESPONSE REGULATOR receiver
ABA1_03502	COG0427	acetyl-CoA hydrolase
ABA1_03508	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ABA1_03516	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ABA1_03527	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABA1_03529	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABA1_03530	COG1733	regulation of RNA biosynthetic process
ABA1_03533	COG1733	regulation of RNA biosynthetic process
ABA1_03537	COG0667	Aldo Keto reductase
ABA1_03541	COG0583	DNA-binding transcription factor activity
ABA1_03542	COG2814	Major facilitator Superfamily
ABA1_03549	COG1335	isochorismatase
ABA1_03551	COG1012	belongs to the aldehyde dehydrogenase family
ABA1_03552	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABA1_03554	COG1113	amino acid transport
ABA1_03556	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABA1_03559	COG2814	Major facilitator Superfamily
ABA1_03561	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ABA1_03561	COG0352	thiamine-phosphate diphosphorylase activity
ABA1_03561	COG0351	phosphomethylpyrimidine kinase
ABA1_03565	COG1309	transcriptional regulator
ABA1_03566	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ABA1_03567	COG3706	GGDEF domain
ABA1_03569	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABA1_03571	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABA1_03572	COG3162	membrane
ABA1_03573	COG2205	protein histidine kinase activity
ABA1_03573	COG2198	Histidine kinase
ABA1_03573	COG0784	Response regulator, receiver
ABA1_03578	COG1522	sequence-specific DNA binding
ABA1_03579	COG1335	isochorismatase
ABA1_03580	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABA1_03582	COG0668	transmembrane transport
ABA1_03583	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABA1_03584	COG1519	Transferase
ABA1_03585	COG1902	pentaerythritol trinitrate reductase activity
ABA1_03590	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ABA1_03595	COG0426	domain, Protein
ABA1_03595	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABA1_03596	COG4774	siderophore transport
ABA1_03597	COG2119	membrane
ABA1_03599	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABA1_03601	COG4942	peptidase
ABA1_03604	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ABA1_03606	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ABA1_03610	COG0189	ligase activity
ABA1_03614	COG0708	Exodeoxyribonuclease III
ABA1_03615	COG1393	Belongs to the ArsC family
ABA1_03618	COG3706	GGDEF domain
ABA1_03625	COG2351	hydroxyisourate hydrolase activity
ABA1_03626	COG2233	PERMEase
ABA1_03628	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABA1_03630	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
ABA1_03632	COG3150	esterase
ABA1_03638	COG3409	Peptidoglycan-binding domain 1 protein
ABA1_03638	COG5632	N-Acetylmuramoyl-L-alanine amidase
ABA1_03638	COG1388	LysM domain
ABA1_03639	COG3501	Rhs element vgr protein
ABA1_03641	COG2918	glutathione biosynthetic process
ABA1_03644	COG2733	membrane
ABA1_03645	COG0436	Aminotransferase
ABA1_03646	COG0534	Mate efflux family protein
ABA1_03663	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ABA1_03664	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ABA1_03666	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ABA1_03671	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABA1_03674	COG0010	Belongs to the arginase family
ABA1_03680	COG2188	Transcriptional regulator
ABA1_03682	COG0523	cobalamin synthesis protein
ABA1_03684	COG1113	amino acid transport
ABA1_03686	COG0625	glutathione transferase activity
ABA1_03690	COG1683	Conserved Protein
ABA1_03691	COG0534	Mate efflux family protein
ABA1_03692	COG0385	Bile acid
ABA1_03693	COG1335	isochorismatase
ABA1_03694	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABA1_03698	COG2116	formate transmembrane transporter activity
ABA1_03699	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ABA1_03700	COG2133	pyrroloquinoline quinone binding
ABA1_03701	COG2983	Belongs to the UPF0260 family
ABA1_03705	COG1194	a g-specific adenine glycosylase
ABA1_03708	COG2818	Glycosylase
ABA1_03709	COG1064	alcohol dehydrogenase
ABA1_03710	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABA1_03712	COG0583	DNA-binding transcription factor activity
ABA1_03713	COG0656	L-ascorbic acid biosynthetic process
ABA1_03714	COG2814	Major facilitator Superfamily
ABA1_03721	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABA1_03724	COG2233	PERMEase
ABA1_03725	COG0583	DNA-binding transcription factor activity
ABA1_03732	COG0733	neurotransmitter:sodium symporter activity