A388_00001 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site A388_00001 IPR002305 Aminoacyl-tRNA synthetase, class Ic A388_00001 IPR002307 Tyrosine-tRNA ligase A388_00001 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_00001 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 A388_00001 IPR036986 A388_00001 A388_00002 IPR005338 Anhydro-N-acetylmuramic acid kinase A388_00003 IPR000073 Alpha/beta hydrolase fold-1 A388_00003 IPR000639 Epoxide hydrolase-like A388_00003 IPR029058 Alpha/Beta hydrolase fold A388_00004 IPR000361 FeS cluster biogenesis A388_00004 IPR016092 FeS cluster insertion protein A388_00004 IPR017870 FeS cluster insertion, C-terminal, conserved site A388_00004 IPR023063 Iron-sulfur cluster insertion protein ErpA A388_00004 IPR035903 A388_00004 A388_00005 IPR038404 A388_00005 A388_00006 IPR038404 A388_00006 A388_00007 IPR038404 A388_00007 A388_00008 IPR003439 ABC transporter-like A388_00008 IPR003593 AAA+ ATPase domain A388_00008 IPR017871 ABC transporter, conserved site A388_00008 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00008 IPR032781 A388_00008 A388_00009 IPR032816 A388_00009 A388_00010 IPR009155 Cytochrome b562 A388_00010 IPR010980 Cytochrome c/b562 A388_00011 IPR000565 DNA topoisomerase, type IIA, subunit B A388_00011 IPR001241 DNA topoisomerase, type IIA A388_00011 IPR002288 DNA gyrase B subunit, C-terminal A388_00011 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_00011 IPR006171 Toprim domain A388_00011 IPR011557 DNA gyrase, subunit B A388_00011 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 A388_00011 IPR013759 DNA topoisomerase, type IIA, central domain A388_00011 IPR013760 DNA topoisomerase, type IIA-like domain A388_00011 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup A388_00011 IPR018522 DNA topoisomerase, type IIA, conserved site A388_00011 IPR020568 Ribosomal protein S5 domain 2-type fold A388_00011 IPR036890 A388_00011 A388_00012 IPR001238 DNA-binding, RecF A388_00012 IPR003395 RecF/RecN/SMC, N-terminal A388_00012 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00013 IPR001001 DNA polymerase III, beta chain A388_00013 IPR022634 DNA polymerase III, beta chain, N-terminal A388_00013 IPR022635 DNA polymerase III, beta chain, C-terminal A388_00013 IPR022637 DNA polymerase III, beta chain, central A388_00014 IPR001957 Chromosomal replication control, initiator DnaA A388_00014 IPR003593 AAA+ ATPase domain A388_00014 IPR010921 Trp repressor/replication initiator A388_00014 IPR013159 Chromosomal replication initiator, DnaA C-terminal A388_00014 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) A388_00014 IPR018312 Chromosomal replication control, initiator DnaA, conserved site A388_00014 IPR020591 Chromosomal replication control, initiator DnaA-like A388_00014 IPR024633 DnaA N-terminal domain A388_00014 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00014 IPR038454 A388_00014 A388_00015 IPR000271 Ribosomal protein L34 A388_00015 IPR020939 Ribosomal protein L34, conserved site A388_00016 IPR000100 Ribonuclease P A388_00016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup A388_00016 IPR020539 Ribonuclease P, conserved site A388_00016 IPR020568 Ribosomal protein S5 domain 2-type fold A388_00017 IPR002696 Putative membrane protein insertion efficiency factor A388_00018 IPR001708 Membrane insertase OXA1/ALB3/YidC A388_00018 IPR019998 Membrane insertase YidC A388_00018 IPR028053 Membrane insertase YidC, N-terminal A388_00018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal A388_00018 IPR038210 A388_00018 A388_00018 IPR038221 A388_00018 A388_00019 IPR004520 tRNA modification GTPase MnmE A388_00019 IPR005225 Small GTP-binding protein domain A388_00019 IPR006073 GTP binding domain A388_00019 IPR018948 GTP-binding protein TrmE, N-terminal A388_00019 IPR025867 tRNA modification GTPase MnmE C-terminal domain A388_00019 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 A388_00019 IPR027368 tRNA modification GTPase MnmE domain 2 A388_00019 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00020 IPR003735 Metal-sensitive transcriptional repressor A388_00020 IPR038390 A388_00020 A388_00021 IPR002524 Cation efflux protein A388_00021 IPR027469 Cation efflux protein transmembrane domain A388_00022 IPR009094 Disulphide bond isomerase, DsbC, N-terminal A388_00022 IPR012336 Thioredoxin-like fold A388_00022 IPR017937 Thioredoxin, conserved site A388_00022 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal A388_00022 IPR036249 A388_00022 A388_00023 IPR007341 Transglycosylase-associated protein A388_00024 IPR000836 Phosphoribosyltransferase domain A388_00024 IPR005904 Hypoxanthine phosphoribosyl transferase A388_00024 IPR029057 Phosphoribosyltransferase-like A388_00026 IPR006680 Amidohydrolase 1 A388_00026 IPR011059 Metal-dependent hydrolase, composite domain A388_00026 IPR014311 Guanine deaminase A388_00026 IPR032466 A388_00026 A388_00027 IPR017941 Rieske [2Fe-2S] iron-sulphur domain A388_00027 IPR036922 A388_00027 A388_00028 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain A388_00028 IPR016185 Pre-ATP-grasp domain A388_00030 IPR005496 Integral membrane protein TerC A388_00030 IPR022369 Integral membrane protein TerC, riboswitch-linked A388_00031 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase A388_00031 IPR036938 A388_00031 A388_00032 IPR010640 Low temperature requirement A A388_00033 IPR000713 Mur ligase, N-terminal A388_00033 IPR004101 Mur ligase, C-terminal A388_00033 IPR005757 Murein peptide ligase A388_00033 IPR013221 Mur ligase, central A388_00033 IPR036565 A388_00033 A388_00033 IPR036615 A388_00033 A388_00034 IPR007437 Protein of unknown function DUF486 A388_00035 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain A388_00035 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE A388_00035 IPR033747 A388_00035 A388_00035 IPR035893 A388_00035 A388_00036 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type A388_00036 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit A388_00036 IPR011054 Rudiment single hybrid motif A388_00036 IPR013815 ATP-grasp fold, subdomain 1 A388_00036 IPR016185 Pre-ATP-grasp domain A388_00037 IPR002477 Peptidoglycan binding-like A388_00037 IPR011970 Lytic murein transglycosylase A388_00037 IPR023346 Lysozyme-like domain A388_00037 IPR031304 A388_00037 A388_00037 IPR036365 A388_00037 A388_00037 IPR036366 A388_00037 A388_00039 IPR001818 Peptidase M10, metallopeptidase A388_00039 IPR006026 Peptidase, metallopeptidase A388_00039 IPR021190 Peptidase M10A A388_00040 IPR001818 Peptidase M10, metallopeptidase A388_00040 IPR006026 Peptidase, metallopeptidase A388_00040 IPR021190 Peptidase M10A A388_00040 IPR024079 Metallopeptidase, catalytic domain A388_00041 IPR012725 Chaperone DnaK A388_00041 IPR013126 Heat shock protein 70 family A388_00041 IPR018181 Heat shock protein 70, conserved site A388_00041 IPR029047 Heat shock protein 70kD, peptide-binding domain A388_00041 IPR029048 Heat shock protein 70kD, C-terminal domain A388_00042 IPR000740 GrpE nucleotide exchange factor A388_00042 IPR009012 GrpE nucleotide exchange factor, head A388_00042 IPR013805 GrpE nucleotide exchange factor, coiled-coil A388_00043 IPR000847 Transcription regulator HTH, LysR A388_00043 IPR005119 LysR, substrate-binding A388_00043 IPR036388 A388_00043 A388_00043 IPR036390 A388_00043 A388_00044 IPR001279 Beta-lactamase-like A388_00044 IPR036866 A388_00044 A388_00047 IPR013094 Alpha/beta hydrolase fold-3 A388_00047 IPR029058 Alpha/Beta hydrolase fold A388_00048 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain A388_00048 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site A388_00048 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase A388_00048 IPR029000 Cyclophilin-like domain A388_00051 IPR002110 Ankyrin repeat A388_00051 IPR020683 Ankyrin repeat-containing domain A388_00051 IPR036770 A388_00051 A388_00052 IPR005025 NADPH-dependent FMN reductase-like A388_00052 IPR029039 Flavoprotein-like A388_00053 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain A388_00054 IPR001872 Peptidase A8, signal peptidase II A388_00055 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site A388_00055 IPR002300 Aminoacyl-tRNA synthetase, class Ia A388_00055 IPR002301 Isoleucine-tRNA ligase A388_00055 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain A388_00055 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding A388_00055 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase A388_00055 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding A388_00055 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_00055 IPR023585 Isoleucine-tRNA ligase, type 1 A388_00056 IPR002606 Riboflavin kinase, bacterial A388_00056 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_00056 IPR015864 FAD synthetase A388_00056 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic A388_00056 IPR023465 Riboflavin kinase domain A388_00057 IPR004695 Voltage-dependent anion channel A388_00057 IPR038665 A388_00057 A388_00058 IPR000845 Nucleoside phosphorylase domain A388_00058 IPR035994 A388_00058 A388_00059 IPR001647 DNA-binding HTH domain, TetR-type A388_00059 IPR009057 Homeodomain-like A388_00059 IPR013573 Transcription regulator YcdC, C-terminal A388_00059 IPR036271 A388_00059 A388_00060 IPR003439 ABC transporter-like A388_00060 IPR003593 AAA+ ATPase domain A388_00060 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00061 IPR000515 MetI-like domain A388_00061 IPR035906 A388_00061 A388_00062 IPR011251 Luciferase-like domain A388_00062 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent A388_00062 IPR036661 A388_00062 A388_00063 IPR001638 Extracellular solute-binding protein, family 3 A388_00063 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates A388_00064 IPR001638 Extracellular solute-binding protein, family 3 A388_00064 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates A388_00064 IPR015168 SsuA/THI5-like A388_00065 IPR000182 GNAT domain A388_00065 IPR001048 Aspartate/glutamate/uridylate kinase A388_00065 IPR010167 Amino-acid N-acetyltransferase (ArgA) A388_00065 IPR016181 Acyl-CoA N-acyltransferase A388_00065 IPR036393 A388_00065 A388_00066 IPR024572 Protein of unknown function DUF3315 A388_00067 IPR024572 Protein of unknown function DUF3315 A388_00068 IPR002347 Glucose/ribitol dehydrogenase A388_00068 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_00068 IPR036291 A388_00068 A388_00069 IPR006439 HAD hydrolase, subfamily IA A388_00069 IPR023198 Phosphoglycolate phosphatase, domain 2 A388_00069 IPR023214 HAD-like domain A388_00069 IPR036412 A388_00069 A388_00070 IPR010233 Ubiquinone biosynthesis O-methyltransferase A388_00070 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_00071 IPR001853 DSBA-like thioredoxin domain A388_00071 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL A388_00071 IPR036249 A388_00071 A388_00072 IPR001647 DNA-binding HTH domain, TetR-type A388_00072 IPR009057 Homeodomain-like A388_00073 IPR001647 DNA-binding HTH domain, TetR-type A388_00073 IPR009057 Homeodomain-like A388_00074 IPR000951 Phthalate dioxygenase reductase A388_00074 IPR001433 Oxidoreductase FAD/NAD(P)-binding A388_00074 IPR008333 Oxidoreductase, FAD-binding domain A388_00074 IPR012675 Beta-grasp domain A388_00074 IPR017938 Riboflavin synthase-like beta-barrel A388_00074 IPR036010 A388_00074 A388_00074 IPR039261 A388_00074 A388_00075 IPR005804 Fatty acid desaturase, type 1 A388_00076 IPR001247 Exoribonuclease, phosphorolytic domain 1 A388_00076 IPR002381 Ribonuclease phosphorolytic, bacterial-type A388_00076 IPR015847 Exoribonuclease, phosphorolytic domain 2 A388_00076 IPR018336 Ribonuclease PH, conserved site A388_00076 IPR020568 Ribosomal protein S5 domain 2-type fold A388_00076 IPR027408 PNPase/RNase PH domain A388_00076 IPR036345 A388_00076 A388_00077 IPR007312 Phosphoesterase A388_00077 IPR008475 Bacterial phospholipase C, C-terminal domain A388_00077 IPR017767 Bacterial phospholipase C, phosphocholine-specific A388_00077 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha A388_00079 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal A388_00079 IPR004393 Nicotinate-nucleotide pyrophosphorylase A388_00079 IPR013785 Aldolase-type TIM barrel A388_00079 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal A388_00079 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD A388_00079 IPR036068 A388_00079 A388_00079 IPR037128 A388_00079 A388_00080 IPR002502 N-acetylmuramoyl-L-alanine amidase domain A388_00080 IPR036505 A388_00080 A388_00081 IPR004268 Flagellin assembly, membrane protein MviN A388_00082 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal A388_00082 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain A388_00082 IPR008104 Macrophage infectivity potentiator A388_00082 IPR036944 A388_00082 A388_00083 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal A388_00083 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain A388_00083 IPR036944 A388_00083 A388_00084 IPR003856 Lipopolysaccharide biosynthesis A388_00084 IPR005702 Exopolysaccharide synthesis protein A388_00084 IPR025669 AAA domain A388_00084 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00084 IPR032807 A388_00084 A388_00085 IPR017867 Protein-tyrosine phosphatase, low molecular weight A388_00085 IPR023485 Phosphotyrosine protein phosphatase I superfamily A388_00085 IPR036196 A388_00085 A388_00086 IPR003715 Polysaccharide export protein A388_00087 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal A388_00087 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_00087 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation A388_00087 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal A388_00087 IPR017476 UDP-glucose/GDP-mannose dehydrogenase A388_00087 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase A388_00087 IPR036220 A388_00087 A388_00087 IPR036291 A388_00087 A388_00088 IPR002797 Polysaccharide biosynthesis protein A388_00089 IPR007345 Polysaccharide pyruvyl transferase A388_00090 IPR001173 Glycosyltransferase 2-like A388_00090 IPR029044 Nucleotide-diphospho-sugar transferases A388_00092 IPR001173 Glycosyltransferase 2-like A388_00092 IPR029044 Nucleotide-diphospho-sugar transferases A388_00093 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal A388_00093 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_00093 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation A388_00093 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal A388_00093 IPR017476 UDP-glucose/GDP-mannose dehydrogenase A388_00093 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type A388_00093 IPR036220 A388_00093 A388_00093 IPR036291 A388_00093 A388_00094 IPR001296 Glycosyl transferase, family 1 A388_00094 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain A388_00095 IPR003362 Bacterial sugar transferase A388_00096 IPR001451 Bacterial transferase hexapeptide repeat A388_00096 IPR011004 Trimeric LpxA-like A388_00096 IPR020019 Sialic acid O-acyltransferase, NeuD A388_00097 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase A388_00097 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_00097 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_00097 IPR015424 Pyridoxal phosphate-dependent transferase A388_00098 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain A388_00098 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_00098 IPR036291 A388_00098 A388_00099 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type A388_00099 IPR005835 Nucleotidyl transferase A388_00099 IPR029044 Nucleotide-diphospho-sugar transferases A388_00100 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_00100 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation A388_00100 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal A388_00100 IPR017476 UDP-glucose/GDP-mannose dehydrogenase A388_00100 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type A388_00100 IPR036220 A388_00100 A388_00100 IPR036291 A388_00100 A388_00101 IPR001672 Phosphoglucose isomerase (PGI) A388_00101 IPR018189 Phosphoglucose isomerase, conserved site A388_00101 IPR023096 Phosphoglucose isomerase, C-terminal A388_00102 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain A388_00102 IPR005886 UDP-glucose 4-epimerase GalE A388_00102 IPR036291 A388_00102 A388_00103 IPR000917 Sulfatase A388_00103 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha A388_00103 IPR017850 Alkaline-phosphatase-like, core domain A388_00106 IPR005841 Alpha-D-phosphohexomutase superfamily A388_00106 IPR005843 Alpha-D-phosphohexomutase, C-terminal A388_00106 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I A388_00106 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II A388_00106 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III A388_00106 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III A388_00106 IPR016066 Alpha-D-phosphohexomutase, conserved site A388_00106 IPR036900 A388_00106 A388_00107 IPR003804 L-lactate permease A388_00108 IPR000524 Transcription regulator HTH, GntR A388_00108 IPR008920 Transcription regulator FadR/GntR, C-terminal A388_00108 IPR011711 GntR, C-terminal A388_00108 IPR036388 A388_00108 A388_00108 IPR036390 A388_00108 A388_00109 IPR000262 FMN-dependent dehydrogenase A388_00109 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site A388_00109 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent A388_00109 IPR013785 Aldolase-type TIM barrel A388_00109 IPR020920 L-lactate dehydrogenase, bacterial A388_00110 IPR006094 FAD linked oxidase, N-terminal A388_00110 IPR012256 D-lactate dehydrogenase A388_00110 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal A388_00110 IPR016164 FAD-linked oxidase-like, C-terminal A388_00110 IPR016167 FAD-binding, type 2, subdomain 1 A388_00110 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 A388_00110 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 A388_00110 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 A388_00110 IPR036318 A388_00110 A388_00111 IPR000796 Aspartate/other aminotransferase A388_00111 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site A388_00111 IPR004839 Aminotransferase, class I/classII A388_00111 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_00111 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_00111 IPR015424 Pyridoxal phosphate-dependent transferase A388_00112 IPR000524 Transcription regulator HTH, GntR A388_00112 IPR008920 Transcription regulator FadR/GntR, C-terminal A388_00112 IPR011711 GntR, C-terminal A388_00112 IPR036388 A388_00112 A388_00112 IPR036390 A388_00112 A388_00113 IPR012695 Methylisocitrate lyase A388_00113 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain A388_00113 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site A388_00114 IPR002020 Citrate synthase-like A388_00114 IPR011278 2-methylcitrate synthase/citrate synthase type I A388_00114 IPR016142 Citrate synthase-like, large alpha subdomain A388_00114 IPR016143 Citrate synthase-like, small alpha subdomain A388_00114 IPR019810 Citrate synthase active site A388_00114 IPR024176 Citrate synthase, bacterial-type A388_00114 IPR036969 A388_00114 A388_00115 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel A388_00115 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha A388_00115 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent A388_00115 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel A388_00115 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 A388_00115 IPR036008 A388_00115 A388_00117 IPR025196 Domain of unknown function DUF4126 A388_00118 IPR000182 GNAT domain A388_00118 IPR016181 Acyl-CoA N-acyltransferase A388_00120 IPR032301 A388_00120 A388_00121 IPR002347 Glucose/ribitol dehydrogenase A388_00121 IPR036291 A388_00121 A388_00122 IPR010406 Protein of unknown function DUF1003 A388_00123 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F A388_00123 IPR020103 Pseudouridine synthase, catalytic domain A388_00124 IPR009671 Regulator of ribonuclease activity B domain A388_00124 IPR036701 A388_00124 A388_00125 IPR032710 A388_00125 A388_00125 IPR037401 A388_00125 A388_00126 IPR000531 TonB-dependent receptor, beta-barrel A388_00126 IPR010105 TonB-dependent siderophore receptor A388_00126 IPR012910 TonB-dependent receptor, plug A388_00126 IPR036942 A388_00126 A388_00126 IPR037066 A388_00126 A388_00127 IPR012429 Protein of unknown function DUF1624 A388_00128 IPR000485 AsnC-type HTH domain A388_00128 IPR011008 Dimeric alpha-beta barrel A388_00128 IPR019885 Transcription regulator HTH, AsnC-type, conserved site A388_00128 IPR019887 Transcription regulator AsnC-type, C-terminal A388_00128 IPR019888 Transcription regulator AsnC-type A388_00128 IPR036388 A388_00128 A388_00128 IPR036390 A388_00128 A388_00129 IPR006076 FAD dependent oxidoreductase A388_00129 IPR023080 D-amino acid dehydrogenase small subunit, DadA A388_00129 IPR036188 A388_00129 A388_00130 IPR000821 Alanine racemase A388_00130 IPR001608 Alanine racemase, N-terminal A388_00130 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal A388_00130 IPR011079 Alanine racemase, C-terminal A388_00130 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site A388_00130 IPR029066 PLP-binding barrel A388_00131 IPR006175 YjgF/Yer057p/UK114 family A388_00131 IPR035959 A388_00131 A388_00132 IPR002293 Amino acid/polyamine transporter I A388_00132 IPR004840 Amino acid permease, conserved site A388_00132 IPR004841 Amino acid permease/ SLC12A domain A388_00133 IPR002293 Amino acid/polyamine transporter I A388_00133 IPR004840 Amino acid permease, conserved site A388_00133 IPR004841 Amino acid permease/ SLC12A domain A388_00134 IPR000847 Transcription regulator HTH, LysR A388_00134 IPR005119 LysR, substrate-binding A388_00134 IPR036388 A388_00134 A388_00134 IPR036390 A388_00134 A388_00135 IPR010061 Methylmalonate-semialdehyde dehydrogenase A388_00135 IPR015590 Aldehyde dehydrogenase domain A388_00135 IPR016160 Aldehyde dehydrogenase, cysteine active site A388_00135 IPR016161 Aldehyde/histidinol dehydrogenase A388_00135 IPR016162 Aldehyde dehydrogenase, N-terminal A388_00135 IPR016163 Aldehyde dehydrogenase, C-terminal A388_00136 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site A388_00136 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding A388_00136 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_00136 IPR011548 3-hydroxyisobutyrate dehydrogenase A388_00136 IPR013328 Dehydrogenase, multihelical A388_00136 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type A388_00136 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain A388_00136 IPR036291 A388_00136 A388_00137 IPR000873 AMP-dependent synthetase/ligase A388_00137 IPR020845 AMP-binding, conserved site A388_00137 IPR025110 AMP-binding enzyme C-terminal domain A388_00138 IPR006089 Acyl-CoA dehydrogenase, conserved site A388_00138 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_00138 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_00138 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_00138 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_00138 IPR036250 A388_00138 A388_00138 IPR037069 A388_00138 A388_00139 IPR001753 Crotonase superfamily A388_00139 IPR014748 Crontonase, C-terminal A388_00139 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site A388_00139 IPR029045 ClpP/crotonase-like domain A388_00140 IPR029045 ClpP/crotonase-like domain A388_00140 IPR032259 A388_00140 A388_00141 IPR011701 Major facilitator superfamily A388_00141 IPR036259 A388_00141 A388_00142 IPR000792 Transcription regulator LuxR, C-terminal A388_00142 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain A388_00142 IPR016032 Signal transduction response regulator, C-terminal effector A388_00142 IPR036388 A388_00142 A388_00142 IPR036693 A388_00142 A388_00143 IPR000073 Alpha/beta hydrolase fold-1 A388_00143 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain A388_00143 IPR029058 Alpha/Beta hydrolase fold A388_00143 IPR036291 A388_00143 A388_00144 IPR008278 4'-phosphopantetheinyl transferase superfamily A388_00144 IPR037143 A388_00144 A388_00147 IPR002634 BolA protein A388_00147 IPR036065 A388_00147 A388_00148 IPR007360 Invasion gene expression up-regulator, SirB A388_00149 IPR025669 AAA domain A388_00149 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00151 IPR001123 Lysine-type exporter protein (LYSE/YGGA) A388_00152 IPR032816 A388_00152 A388_00153 IPR032808 A388_00153 A388_00154 IPR007383 Protein of unknown function DUF445 A388_00155 IPR001674 GMP synthase, C-terminal A388_00155 IPR004739 GMP synthase, N-terminal A388_00155 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_00155 IPR017926 Glutamine amidotransferase A388_00155 IPR022310 NAD/GMP synthase A388_00155 IPR022955 GMP synthase A388_00155 IPR029062 Class I glutamine amidotransferase-like A388_00156 IPR002934 Nucleotidyl transferase domain A388_00156 IPR025184 Domain of unknown function DUF4111 A388_00157 IPR005149 Transcription regulator PadR N-terminal A388_00157 IPR036388 A388_00157 A388_00157 IPR036390 A388_00157 A388_00158 IPR024476 Protein of unknown function DUF3861 A388_00159 IPR003829 Pirin, N-terminal domain A388_00159 IPR008778 Pirin, C-terminal domain A388_00159 IPR011051 RmlC-like cupin domain A388_00159 IPR012093 Pirin A388_00159 IPR014710 RmlC-like jelly roll fold A388_00160 IPR003718 OsmC/Ohr family A388_00160 IPR015946 K homology domain-like, alpha/beta A388_00160 IPR036102 A388_00160 A388_00161 IPR004045 Glutathione S-transferase, N-terminal A388_00161 IPR004046 Glutathione S-transferase, C-terminal A388_00161 IPR036249 A388_00161 A388_00161 IPR036282 A388_00161 A388_00162 IPR007730 Sporulation-related domain A388_00162 IPR036680 A388_00162 A388_00163 IPR001278 Arginine-tRNA ligase A388_00163 IPR005148 Arginyl tRNA synthetase N-terminal domain A388_00163 IPR008909 DALR anticodon binding A388_00163 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding A388_00163 IPR035684 A388_00163 A388_00163 IPR036695 A388_00163 A388_00164 IPR001891 Malic oxidoreductase A388_00164 IPR012301 Malic enzyme, N-terminal domain A388_00164 IPR012302 Malic enzyme, NAD-binding A388_00164 IPR015884 Malic enzyme, conserved site A388_00164 IPR023667 NAD-dependent malic enzyme, proteobacteria A388_00164 IPR036291 A388_00164 A388_00164 IPR037062 A388_00164 A388_00165 IPR006314 Dyp-type peroxidase A388_00165 IPR011008 Dimeric alpha-beta barrel A388_00166 IPR001123 Lysine-type exporter protein (LYSE/YGGA) A388_00167 IPR001626 ABC-3 A388_00167 IPR037294 A388_00167 A388_00168 IPR003439 ABC transporter-like A388_00168 IPR003593 AAA+ ATPase domain A388_00168 IPR017871 ABC transporter, conserved site A388_00168 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00169 IPR002481 Ferric-uptake regulator A388_00169 IPR036388 A388_00169 A388_00169 IPR036390 A388_00169 A388_00170 IPR006127 Periplasmic solute binding protein family A388_00171 IPR005598 ATP synthase protein I A388_00172 IPR000568 ATPase, F0 complex, subunit A A388_00172 IPR023011 ATPase, F0 complex, subunit A, active site A388_00172 IPR035908 A388_00172 A388_00173 IPR000454 ATPase, F0 complex, subunit C A388_00173 IPR002379 V-ATPase proteolipid subunit C-like domain A388_00173 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast A388_00173 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site A388_00173 IPR035921 A388_00173 A388_00173 IPR038662 A388_00173 A388_00174 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast A388_00174 IPR005864 ATPase, F0 complex, subunit B, bacterial A388_00174 IPR028987 F-type ATP synthase subunit B-like, membrane domain A388_00175 IPR000711 ATPase, OSCP/delta subunit A388_00175 IPR020781 ATPase, OSCP/delta subunit, conserved site A388_00175 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain A388_00176 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain A388_00176 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal A388_00176 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain A388_00176 IPR005294 ATPase, F1 complex, alpha subunit A388_00176 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site A388_00176 IPR023366 ATP synthase subunit alpha-like domain A388_00176 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00176 IPR036121 A388_00176 A388_00176 IPR038376 A388_00176 A388_00177 IPR000131 ATPase, F1 complex, gamma subunit A388_00177 IPR023632 ATPase, F1 complex, gamma subunit conserved site A388_00177 IPR035968 A388_00177 A388_00178 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain A388_00178 IPR003593 AAA+ ATPase domain A388_00178 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain A388_00178 IPR005722 ATPase, F1 complex, beta subunit A388_00178 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site A388_00178 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal A388_00178 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00178 IPR036121 A388_00178 A388_00179 IPR001469 ATPase, F1 complex, delta/epsilon subunit A388_00179 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal A388_00179 IPR036771 A388_00179 A388_00179 IPR036794 A388_00179 A388_00181 IPR000889 Glutathione peroxidase A388_00181 IPR029759 Glutathione peroxidase active site A388_00181 IPR036249 A388_00181 A388_00182 IPR009057 Homeodomain-like A388_00182 IPR011051 RmlC-like cupin domain A388_00182 IPR018060 DNA binding HTH domain, AraC-type A388_00182 IPR018062 HTH domain AraC-type, conserved site A388_00183 IPR011701 Major facilitator superfamily A388_00183 IPR036259 A388_00183 A388_00184 IPR001647 DNA-binding HTH domain, TetR-type A388_00184 IPR009057 Homeodomain-like A388_00184 IPR023772 DNA-binding HTH domain, TetR-type, conserved site A388_00184 IPR036271 A388_00184 A388_00185 IPR000620 Drug/metabolite transporter A388_00186 IPR006070 YrdC-like domain A388_00186 IPR017945 DHBP synthase RibB-like alpha/beta domain A388_00186 IPR023535 Threonylcarbamoyl-AMP synthase A388_00187 IPR003488 DNA recombination-mediator protein A A388_00188 IPR018392 LysM domain A388_00188 IPR036779 A388_00188 A388_00189 IPR023635 Peptide deformylase A388_00189 IPR036821 A388_00189 A388_00190 IPR021333 Protein of unknown function DUF2946 A388_00191 IPR000531 TonB-dependent receptor, beta-barrel A388_00191 IPR010100 TonB-dependent copper receptor A388_00191 IPR012910 TonB-dependent receptor, plug A388_00191 IPR036942 A388_00191 A388_00191 IPR037066 A388_00191 A388_00193 IPR018713 Domain of unknown function DUF2236 A388_00194 IPR001647 DNA-binding HTH domain, TetR-type A388_00194 IPR009057 Homeodomain-like A388_00194 IPR023772 DNA-binding HTH domain, TetR-type, conserved site A388_00197 IPR016181 Acyl-CoA N-acyltransferase A388_00198 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site A388_00198 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme A388_00198 IPR005856 Cysteine synthase K/M A388_00198 IPR005859 Cysteine synthase A A388_00198 IPR036052 A388_00198 A388_00199 IPR008258 Lytic transglycosylase-like SLT domain A388_00199 IPR023346 Lysozyme-like domain A388_00200 IPR001226 Flavodoxin, conserved site A388_00200 IPR005025 NADPH-dependent FMN reductase-like A388_00200 IPR029039 Flavoprotein-like A388_00201 IPR021329 Protein of unknown function DUF2938 A388_00202 IPR000551 MerR-type HTH domain A388_00202 IPR009061 DNA binding domain, putative A388_00203 IPR027372 Phytase-like domain A388_00204 IPR006638 Elongator protein 3/MiaB/NifB A388_00204 IPR007197 Radical SAM A388_00204 IPR013704 Uncharacterised protein family UPF0313, N-terminal A388_00204 IPR020612 Methylthiotransferase, conserved site A388_00204 IPR022946 Uncharacterised protein family UPF0313 A388_00204 IPR023404 Radical SAM, alpha/beta horseshoe A388_00204 IPR024560 Uncharacterised protein family UPF0313, C-terminal A388_00205 IPR024402 Domain of unknown function DUF2726 A388_00206 IPR006175 YjgF/Yer057p/UK114 family A388_00206 IPR035959 A388_00206 A388_00207 IPR001126 DNA-repair protein, UmuC-like A388_00207 IPR017961 DNA polymerase, Y-family, little finger domain A388_00207 IPR022880 DNA polymerase IV A388_00207 IPR024728 DNA polymerase type-Y, HhH motif A388_00207 IPR036775 A388_00207 A388_00208 IPR002053 Glycoside hydrolase, family 25 A388_00208 IPR017853 Glycoside hydrolase, superfamily A388_00208 IPR018077 Glycoside hydrolase, family 25 subgroup A388_00209 IPR004638 Drug resistance transporter EmrB/QacA subfamily A388_00209 IPR011701 Major facilitator superfamily A388_00209 IPR036259 A388_00209 A388_00210 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG A388_00210 IPR031100 A388_00210 A388_00211 IPR000644 CBS domain A388_00211 IPR005170 Transporter-associated domain A388_00211 IPR005496 Integral membrane protein TerC A388_00211 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 A388_00211 IPR036318 A388_00211 A388_00212 IPR004027 SEC-C motif A388_00212 IPR032710 A388_00212 A388_00213 IPR005115 Uncharacterised domain UPF0126 A388_00214 IPR005828 General substrate transporter A388_00214 IPR005829 Sugar transporter, conserved site A388_00214 IPR036259 A388_00214 A388_00215 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal A388_00215 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative A388_00215 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel A388_00215 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain A388_00215 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta A388_00215 IPR013760 DNA topoisomerase, type IIA-like domain A388_00215 IPR035516 A388_00215 A388_00216 IPR000873 AMP-dependent synthetase/ligase A388_00216 IPR020845 AMP-binding, conserved site A388_00216 IPR025110 AMP-binding enzyme C-terminal domain A388_00218 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein A388_00218 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain A388_00219 IPR008162 Inorganic pyrophosphatase A388_00219 IPR036649 A388_00219 A388_00220 IPR005318 Outer membrane porin, bacterial A388_00220 IPR023614 Porin domain A388_00222 IPR010239 Conserved hypothetical protein CHP02001 A388_00223 IPR002220 DapA-like A388_00223 IPR013785 Aldolase-type TIM barrel A388_00224 IPR001303 Class II aldolase/adducin N-terminal A388_00224 IPR036409 A388_00224 A388_00225 IPR000524 Transcription regulator HTH, GntR A388_00225 IPR004839 Aminotransferase, class I/classII A388_00225 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_00225 IPR015424 Pyridoxal phosphate-dependent transferase A388_00225 IPR036388 A388_00225 A388_00225 IPR036390 A388_00225 A388_00227 IPR014832 TnsA endonuclease C-terminal A388_00227 IPR014833 TnsA endonuclease, N-terminal A388_00228 IPR001584 Integrase, catalytic core A388_00228 IPR012337 Ribonuclease H-like domain A388_00228 IPR015378 Transposase-like, Mu, C-terminal A388_00228 IPR036397 A388_00228 A388_00229 IPR003593 AAA+ ATPase domain A388_00229 IPR008868 Bacterial TniB A388_00229 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00230 IPR009492 TniQ A388_00232 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II A388_00232 IPR036188 A388_00232 A388_00233 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II A388_00233 IPR005982 Thioredoxin reductase A388_00233 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site A388_00233 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_00233 IPR036188 A388_00233 A388_00234 IPR005025 NADPH-dependent FMN reductase-like A388_00234 IPR014063 Arsenate resistance ArsH A388_00234 IPR029039 Flavoprotein-like A388_00235 IPR002657 Bile acid:sodium symporter A388_00235 IPR004706 Arsenical-resistance protein ACR3 A388_00235 IPR038770 A388_00235 A388_00236 IPR023485 Phosphotyrosine protein phosphatase I superfamily A388_00236 IPR036196 A388_00236 A388_00237 IPR001845 HTH ArsR-type DNA-binding domain A388_00237 IPR018334 ArsR-type transcription regulator, HTH motif A388_00237 IPR036388 A388_00237 A388_00237 IPR036390 A388_00237 A388_00238 IPR006659 Arsenate reductase A388_00238 IPR006660 Arsenate reductase-like A388_00238 IPR036249 A388_00238 A388_00240 IPR000551 MerR-type HTH domain A388_00240 IPR009061 DNA binding domain, putative A388_00240 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator A388_00241 IPR002524 Cation efflux protein A388_00241 IPR027469 Cation efflux protein transmembrane domain A388_00241 IPR036163 A388_00241 A388_00242 IPR001872 Peptidase A8, signal peptidase II A388_00243 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 A388_00243 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger A388_00243 IPR032877 A388_00243 A388_00245 IPR003601 DNA topoisomerase, type IA, domain 2 A388_00245 IPR003602 DNA topoisomerase, type IA, DNA-binding domain A388_00245 IPR005733 DNA topoisomerase I, bacterial-type A388_00245 IPR006171 Toprim domain A388_00245 IPR013497 DNA topoisomerase, type IA, central A388_00245 IPR013498 DNA topoisomerase, type IA, zn finger A388_00245 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 A388_00245 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 A388_00245 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 A388_00245 IPR023405 DNA topoisomerase, type IA, core domain A388_00245 IPR023406 DNA topoisomerase, type IA, active site A388_00245 IPR028612 DNA topoisomerase I, type IA A388_00246 IPR000424 Primosome PriB/single-strand DNA-binding A388_00246 IPR012340 Nucleic acid-binding, OB-fold A388_00248 IPR000489 Pterin-binding A388_00248 IPR006390 Dihydropteroate synthase A388_00248 IPR011005 Dihydropteroate synthase-like A388_00249 IPR000182 GNAT domain A388_00249 IPR016181 Acyl-CoA N-acyltransferase A388_00250 IPR003457 Mercuric transport protein MerT A388_00251 IPR012337 Ribonuclease H-like domain A388_00251 IPR032874 A388_00251 A388_00252 IPR021767 Protein of unknown function DUF3330 A388_00253 IPR000551 MerR-type HTH domain A388_00253 IPR009061 DNA binding domain, putative A388_00253 IPR011797 Mercuric resistence transcriptional repressor protein MerD A388_00254 IPR001100 A388_00254 A388_00254 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A388_00254 IPR006121 Heavy metal-associated domain, HMA A388_00254 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site A388_00254 IPR016156 FAD/NAD-linked reductase, dimerisation domain A388_00254 IPR017969 Heavy-metal-associated, conserved site A388_00254 IPR021179 Mercury reductase, MerA A388_00254 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_00254 IPR036163 A388_00254 A388_00254 IPR036188 A388_00254 A388_00255 IPR004891 MerC mercury resistance protein A388_00256 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ A388_00256 IPR006121 Heavy metal-associated domain, HMA A388_00256 IPR011795 Mercuric transport protein periplasmic component A388_00256 IPR017969 Heavy-metal-associated, conserved site A388_00256 IPR036163 A388_00256 A388_00257 IPR000551 MerR-type HTH domain A388_00257 IPR009061 DNA binding domain, putative A388_00257 IPR011794 Hg(II)-responsive transcriptional regulator A388_00257 IPR015358 Transcription regulator MerR, DNA binding A388_00258 IPR001647 DNA-binding HTH domain, TetR-type A388_00258 IPR003012 Tetracycline transcriptional regulator, TetR A388_00258 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal A388_00258 IPR009057 Homeodomain-like A388_00258 IPR023772 DNA-binding HTH domain, TetR-type, conserved site A388_00258 IPR036271 A388_00258 A388_00259 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG A388_00259 IPR005829 Sugar transporter, conserved site A388_00259 IPR011701 Major facilitator superfamily A388_00259 IPR036259 A388_00259 A388_00260 IPR000620 Drug/metabolite transporter A388_00261 IPR012337 Ribonuclease H-like domain A388_00261 IPR032874 A388_00261 A388_00262 IPR001707 Chloramphenicol acetyltransferase A388_00262 IPR018372 Chloramphenicol acetyltransferase, active site A388_00262 IPR023213 Chloramphenicol acetyltransferase-like domain A388_00263 IPR005063 Transposase, IS1 A388_00264 IPR002513 Tn3 transposase DDE domain A388_00264 IPR025296 Domain of unknown function DUF4158 A388_00265 IPR006118 Recombinase, conserved site A388_00265 IPR006119 Resolvase, N-terminal A388_00265 IPR006120 Resolvase, HTH domain A388_00265 IPR009057 Homeodomain-like A388_00265 IPR036162 A388_00265 A388_00266 IPR000871 Beta-lactamase, class-A/D A388_00266 IPR012338 Beta-lactamase/transpeptidase-like A388_00266 IPR023650 Beta-lactamase, class-A active site A388_00267 IPR002513 Tn3 transposase DDE domain A388_00267 IPR025296 Domain of unknown function DUF4158 A388_00268 IPR006118 Recombinase, conserved site A388_00268 IPR006119 Resolvase, N-terminal A388_00268 IPR009057 Homeodomain-like A388_00268 IPR036162 A388_00268 A388_00269 IPR012337 Ribonuclease H-like domain A388_00269 IPR032874 A388_00269 A388_00271 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_00272 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V A388_00272 IPR011057 Mss4-like A388_00275 IPR011701 Major facilitator superfamily A388_00275 IPR036259 A388_00275 A388_00276 IPR000847 Transcription regulator HTH, LysR A388_00276 IPR005119 LysR, substrate-binding A388_00276 IPR036388 A388_00276 A388_00276 IPR036390 A388_00276 A388_00277 IPR000620 Drug/metabolite transporter A388_00278 IPR011990 Tetratricopeptide-like helical domain A388_00280 IPR023210 NADP-dependent oxidoreductase domain A388_00280 IPR036812 A388_00280 A388_00281 IPR009057 Homeodomain-like A388_00281 IPR018060 DNA binding HTH domain, AraC-type A388_00281 IPR020449 Transcription regulator HTH, AraC- type A388_00282 IPR001647 DNA-binding HTH domain, TetR-type A388_00282 IPR009057 Homeodomain-like A388_00283 IPR003779 Carboxymuconolactone decarboxylase-like A388_00283 IPR004675 Alkylhydroperoxidase AhpD core A388_00283 IPR029032 AhpD-like A388_00284 IPR002577 Helix-turn-helix, HxlR type A388_00284 IPR036388 A388_00284 A388_00284 IPR036390 A388_00284 A388_00287 IPR002577 Helix-turn-helix, HxlR type A388_00287 IPR036388 A388_00287 A388_00287 IPR036390 A388_00287 A388_00288 IPR003680 Flavodoxin-like fold A388_00288 IPR029039 Flavoprotein-like A388_00289 IPR009057 Homeodomain-like A388_00289 IPR018060 DNA binding HTH domain, AraC-type A388_00290 IPR000182 GNAT domain A388_00290 IPR016181 Acyl-CoA N-acyltransferase A388_00292 IPR003855 K+ potassium transporter A388_00292 IPR023051 Potassium uptake protein, low affinity, Kup A388_00294 IPR001604 DNA/RNA non-specific endonuclease A388_00294 IPR018524 DNA/RNA non-specific endonuclease, active site A388_00294 IPR020821 Extracellular Endonuclease, subunit A A388_00295 IPR001123 Lysine-type exporter protein (LYSE/YGGA) A388_00297 IPR000425 Major intrinsic protein A388_00297 IPR022357 Major intrinsic protein, conserved site A388_00297 IPR023271 Aquaporin-like A388_00297 IPR023743 Aquaporin Z A388_00298 IPR009057 Homeodomain-like A388_00298 IPR018060 DNA binding HTH domain, AraC-type A388_00298 IPR032687 A388_00298 A388_00300 IPR004651 Histidine biosynthesis, HisF A388_00300 IPR006062 Histidine biosynthesis A388_00300 IPR011060 Ribulose-phosphate binding barrel A388_00300 IPR013785 Aldolase-type TIM barrel A388_00301 IPR002575 Aminoglycoside phosphotransferase A388_00301 IPR005280 Homoserine kinase ThrB A388_00301 IPR011009 Protein kinase-like domain A388_00302 IPR002059 Cold-shock protein, DNA-binding A388_00302 IPR010718 Protein of unknown function DUF1294 A388_00302 IPR011129 Cold shock protein A388_00302 IPR012340 Nucleic acid-binding, OB-fold A388_00304 IPR000620 Drug/metabolite transporter A388_00305 IPR001387 Cro/C1-type helix-turn-helix domain A388_00305 IPR010982 Lambda repressor-like, DNA-binding domain A388_00305 IPR011051 RmlC-like cupin domain A388_00305 IPR013096 Cupin 2, conserved barrel A388_00305 IPR014710 RmlC-like jelly roll fold A388_00306 IPR006062 Histidine biosynthesis A388_00306 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA A388_00306 IPR011060 Ribulose-phosphate binding barrel A388_00306 IPR013785 Aldolase-type TIM barrel A388_00306 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase A388_00307 IPR002562 3'-5' exonuclease domain A388_00307 IPR012337 Ribonuclease H-like domain A388_00307 IPR036397 A388_00307 A388_00308 IPR008523 Lactobacillus phage LBR48, DUF805 A388_00309 IPR010139 Imidazole glycerol phosphate synthase, subunit H A388_00309 IPR017926 Glutamine amidotransferase A388_00309 IPR029062 Class I glutamine amidotransferase-like A388_00310 IPR000807 Imidazoleglycerol-phosphate dehydratase A388_00310 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site A388_00310 IPR020568 Ribosomal protein S5 domain 2-type fold A388_00310 IPR038494 A388_00310 A388_00311 IPR000182 GNAT domain A388_00311 IPR016181 Acyl-CoA N-acyltransferase A388_00314 IPR000182 GNAT domain A388_00314 IPR016181 Acyl-CoA N-acyltransferase A388_00315 IPR003702 Acetyl-CoA hydrolase/transferase A388_00315 IPR017821 Succinate CoA transferase A388_00315 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain A388_00315 IPR037171 A388_00315 A388_00315 IPR038460 A388_00315 A388_00316 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_00316 IPR003660 HAMP linker domain A388_00316 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain A388_00316 IPR004358 Signal transduction histidine kinase-related protein, C-terminal A388_00316 IPR036097 A388_00316 A388_00316 IPR036890 A388_00316 A388_00317 IPR001789 Signal transduction response regulator, receiver domain A388_00317 IPR001867 Signal transduction response regulator, C-terminal A388_00317 IPR011006 CheY-like superfamily A388_00317 IPR016032 Signal transduction response regulator, C-terminal effector A388_00317 IPR036388 A388_00317 A388_00318 IPR003029 Ribosomal protein S1, RNA-binding domain A388_00318 IPR006641 YqgF/RNase H-like domain A388_00318 IPR010994 RuvA domain 2-like A388_00318 IPR012337 Ribonuclease H-like domain A388_00318 IPR012340 Nucleic acid-binding, OB-fold A388_00318 IPR018974 Tex-like protein, N-terminal A388_00318 IPR022967 RNA-binding domain, S1 A388_00318 IPR023319 Tex-like protein, HTH domain A388_00318 IPR023323 Tex-like domain A388_00318 IPR032639 A388_00318 A388_00318 IPR037027 A388_00318 A388_00319 IPR001765 Carbonic anhydrase A388_00319 IPR011547 Sulphate transporter A388_00319 IPR036874 A388_00319 A388_00320 IPR002347 Glucose/ribitol dehydrogenase A388_00320 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_00320 IPR036291 A388_00320 A388_00321 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme A388_00321 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase A388_00321 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_00321 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_00321 IPR015424 Pyridoxal phosphate-dependent transferase A388_00322 IPR003439 ABC transporter-like A388_00322 IPR003593 AAA+ ATPase domain A388_00322 IPR017871 ABC transporter, conserved site A388_00322 IPR022374 ABC transporter, ATP-binding protein, ChvD A388_00322 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00322 IPR032781 A388_00322 A388_00326 IPR003423 Outer membrane efflux protein A388_00327 IPR006143 RND efflux pump, membrane fusion protein A388_00327 IPR032317 A388_00327 A388_00328 IPR001036 Acriflavin resistance protein A388_00328 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA A388_00328 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains A388_00329 IPR002524 Cation efflux protein A388_00329 IPR027469 Cation efflux protein transmembrane domain A388_00329 IPR036837 A388_00329 A388_00334 IPR029058 Alpha/Beta hydrolase fold A388_00335 IPR002293 Amino acid/polyamine transporter I A388_00335 IPR004840 Amino acid permease, conserved site A388_00335 IPR004841 Amino acid permease/ SLC12A domain A388_00338 IPR000924 Glutamyl/glutaminyl-tRNA synthetase A388_00338 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site A388_00338 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial A388_00338 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding A388_00338 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_00338 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain A388_00338 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 A388_00340 IPR005669 Thiosulphate/Sulfate-binding protein A388_00341 IPR002903 Ribosomal RNA small subunit methyltransferase H A388_00341 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain A388_00341 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_00342 IPR011922 Cell division protein FtsL A388_00343 IPR001460 Penicillin-binding protein, transpeptidase A388_00343 IPR005311 Penicillin-binding protein, dimerisation domain A388_00343 IPR012338 Beta-lactamase/transpeptidase-like A388_00343 IPR036138 A388_00343 A388_00343 IPR037532 A388_00343 A388_00344 IPR004101 Mur ligase, C-terminal A388_00344 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase A388_00344 IPR013221 Mur ligase, central A388_00344 IPR035911 A388_00344 A388_00344 IPR036565 A388_00344 A388_00344 IPR036615 A388_00344 A388_00345 IPR000713 Mur ligase, N-terminal A388_00345 IPR004101 Mur ligase, C-terminal A388_00345 IPR005863 UDP-MurNAc-pentapeptide synthetase A388_00345 IPR013221 Mur ligase, central A388_00345 IPR035911 A388_00345 A388_00345 IPR036565 A388_00345 A388_00345 IPR036615 A388_00345 A388_00346 IPR000715 Glycosyl transferase, family 4 A388_00346 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase A388_00346 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site A388_00348 IPR013216 Methyltransferase type 11 A388_00348 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted A388_00348 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_00349 IPR001264 Glycosyl transferase, family 51 A388_00349 IPR001460 Penicillin-binding protein, transpeptidase A388_00349 IPR012338 Beta-lactamase/transpeptidase-like A388_00349 IPR023346 Lysozyme-like domain A388_00349 IPR031376 A388_00349 A388_00349 IPR036950 A388_00349 A388_00350 IPR003494 SHS2 domain inserted in FtsA A388_00350 IPR005883 Type IV pilus assembly protein PilM A388_00351 IPR007813 Fimbrial assembly PilN A388_00352 IPR007445 Pilus assembly protein, PilO A388_00352 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 A388_00353 IPR007446 Pilus assembly protein PilP A388_00354 IPR001775 GspD/PilQ family A388_00354 IPR004845 Type II secretion system GspD, conserved site A388_00354 IPR004846 Type II/III secretion system A388_00354 IPR005644 NolW-like A388_00354 IPR011662 Secretin/TonB, short N-terminal A388_00354 IPR013355 Type IV pilus secretin PilQ A388_00354 IPR021731 AMIN domain A388_00355 IPR000623 Shikimate kinase/Threonine synthase-like 1 A388_00355 IPR023000 Shikimate kinase, conserved site A388_00355 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00355 IPR031322 A388_00355 A388_00356 IPR016037 3-dehydroquinate synthase AroB A388_00356 IPR030960 A388_00356 A388_00356 IPR030963 A388_00356 A388_00357 IPR036680 A388_00357 A388_00358 IPR002489 Glutamate synthase, alpha subunit, C-terminal A388_00358 IPR002932 Glutamate synthase domain A388_00358 IPR006982 Glutamate synthase, central-N A388_00358 IPR013785 Aldolase-type TIM barrel A388_00358 IPR017932 Glutamine amidotransferase type 2 domain A388_00358 IPR029055 Nucleophile aminohydrolases, N-terminal A388_00358 IPR036485 A388_00358 A388_00359 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 A388_00359 IPR009051 Alpha-helical ferredoxin A388_00359 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_00359 IPR028261 Dihydroprymidine dehydrogenase domain II A388_00359 IPR036188 A388_00359 A388_00360 IPR016516 Uncharacterised conserved protein UCP07580 A388_00361 IPR007156 LemA A388_00361 IPR023353 LemA-like domain A388_00362 IPR007621 TPM domain A388_00363 IPR007621 TPM domain A388_00364 IPR001082 Fimbrial protein pilin A388_00364 IPR012902 Prokaryotic N-terminal methylation site A388_00365 IPR007016 O-antigen ligase-related A388_00365 IPR021797 Protein of unknown function DUF3366 A388_00365 IPR031726 A388_00365 A388_00366 IPR002024 Bacterioferritin A388_00366 IPR008331 Ferritin/DPS protein domain A388_00366 IPR009078 Ferritin-like superfamily A388_00366 IPR012347 Ferritin-related A388_00367 IPR007419 BFD-like [2Fe-2S]-binding domain A388_00368 IPR006056 Enamine/imine deaminase YjgF-like A388_00368 IPR006175 YjgF/Yer057p/UK114 family A388_00368 IPR019897 YjgF-like protein, conserved site A388_00368 IPR035959 A388_00368 A388_00369 IPR003607 HD/PDEase domain A388_00369 IPR004095 TGS A388_00369 IPR007685 RelA/SpoT A388_00369 IPR012675 Beta-grasp domain A388_00369 IPR012676 TGS-like A388_00370 IPR003716 DNA-directed RNA polymerase, omega subunit A388_00370 IPR006110 RNA polymerase, subunit omega/K/RPB6 A388_00370 IPR012293 RNA polymerase subunit, RPB6/omega A388_00370 IPR036161 A388_00370 A388_00371 IPR008145 Guanylate kinase/L-type calcium channel beta subunit A388_00371 IPR017665 Guanylate kinase A388_00371 IPR020590 Guanylate kinase, conserved site A388_00371 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00372 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase A388_00373 IPR012902 Prokaryotic N-terminal methylation site A388_00373 IPR022346 General secretion pathway, GspH A388_00374 IPR012902 Prokaryotic N-terminal methylation site A388_00374 IPR013362 Pilus modification type IV, PilV A388_00375 IPR012902 Prokaryotic N-terminal methylation site A388_00375 IPR032092 A388_00375 A388_00377 IPR002035 von Willebrand factor, type A A388_00377 IPR008707 PilC beta-propeller domain A388_00377 IPR036465 A388_00377 A388_00378 IPR000983 Bacterial general secretion pathway protein G-type pilin A388_00378 IPR012902 Prokaryotic N-terminal methylation site A388_00378 IPR031982 A388_00378 A388_00379 IPR000983 Bacterial general secretion pathway protein G-type pilin A388_00379 IPR012902 Prokaryotic N-terminal methylation site A388_00379 IPR031982 A388_00379 A388_00380 IPR000307 Ribosomal protein S16 A388_00380 IPR020592 Ribosomal protein S16, conserved site A388_00380 IPR023803 Ribosomal protein S16 domain A388_00381 IPR002676 RimM protein A388_00381 IPR009000 Translation protein, beta-barrel domain A388_00381 IPR011033 PRC-barrel-like A388_00381 IPR011961 16S rRNA processing protein RimM A388_00381 IPR027275 PRC-barrel domain A388_00381 IPR036976 A388_00381 A388_00382 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria A388_00382 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain A388_00382 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal A388_00382 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal A388_00382 IPR029028 Alpha/beta knot methyltransferases A388_00383 IPR001857 Ribosomal protein L19 A388_00383 IPR008991 Translation protein SH3-like domain A388_00383 IPR018257 Ribosomal protein L19, conserved site A388_00383 IPR038657 A388_00383 A388_00384 IPR000073 Alpha/beta hydrolase fold-1 A388_00384 IPR029058 Alpha/Beta hydrolase fold A388_00385 IPR004961 Lipase chaperone A388_00386 IPR002501 Pseudouridine synthase II A388_00386 IPR014780 tRNA pseudouridine synthase II, TruB A388_00386 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal A388_00386 IPR020103 Pseudouridine synthase, catalytic domain A388_00386 IPR032819 A388_00386 A388_00387 IPR002781 Transmembrane protein TauE like A388_00388 IPR012312 Haemerythrin/HHE cation-binding motif A388_00389 IPR000620 Drug/metabolite transporter A388_00390 IPR000620 Drug/metabolite transporter A388_00391 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A388_00391 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain A388_00391 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 A388_00391 IPR036291 A388_00391 A388_00392 IPR004113 FAD-linked oxidase, C-terminal A388_00392 IPR006094 FAD linked oxidase, N-terminal A388_00392 IPR016164 FAD-linked oxidase-like, C-terminal A388_00392 IPR016167 FAD-binding, type 2, subdomain 1 A388_00392 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 A388_00392 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 A388_00392 IPR036318 A388_00392 A388_00394 IPR007138 Antibiotic biosynthesis monooxygenase-like domain A388_00394 IPR011008 Dimeric alpha-beta barrel A388_00395 IPR003680 Flavodoxin-like fold A388_00395 IPR029039 Flavoprotein-like A388_00397 IPR005829 Sugar transporter, conserved site A388_00397 IPR011701 Major facilitator superfamily A388_00397 IPR036259 A388_00397 A388_00398 IPR010019 Integral membrane protein, YccS A388_00398 IPR010020 Integral membrane protein, YccS/YhfK A388_00398 IPR032692 A388_00398 A388_00399 IPR001424 Superoxide dismutase, copper/zinc binding domain A388_00399 IPR018152 Superoxide dismutase, copper/zinc, binding site A388_00399 IPR036423 A388_00399 A388_00400 IPR002549 Uncharacterised protein family UPF0118 A388_00401 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain A388_00401 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00402 IPR019287 Holliday junction resolvase-related domain A388_00405 IPR013216 Methyltransferase type 11 A388_00405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_00406 IPR029058 Alpha/Beta hydrolase fold A388_00407 IPR002293 Amino acid/polyamine transporter I A388_00407 IPR004840 Amino acid permease, conserved site A388_00407 IPR004841 Amino acid permease/ SLC12A domain A388_00408 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase A388_00408 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal A388_00408 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain A388_00408 IPR014362 Glutamate dehydrogenase A388_00408 IPR033524 A388_00408 A388_00408 IPR036291 A388_00408 A388_00409 IPR004636 Acetylornithine/Succinylornithine transaminase family A388_00409 IPR005814 Aminotransferase class-III A388_00409 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_00409 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_00409 IPR015424 Pyridoxal phosphate-dependent transferase A388_00409 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria A388_00410 IPR007041 Arginine N-succinyltransferase Ast/AOST A388_00410 IPR016181 Acyl-CoA N-acyltransferase A388_00410 IPR017650 Arginine N-succinyltransferase AstA A388_00411 IPR015590 Aldehyde dehydrogenase domain A388_00411 IPR016160 Aldehyde dehydrogenase, cysteine active site A388_00411 IPR016161 Aldehyde/histidinol dehydrogenase A388_00411 IPR016162 Aldehyde dehydrogenase, N-terminal A388_00411 IPR016163 Aldehyde dehydrogenase, C-terminal A388_00411 IPR017649 Succinylglutamic semialdehyde dehydrogenase A388_00411 IPR029510 Aldehyde dehydrogenase, glutamic acid active site A388_00412 IPR007079 Succinylarginine dihydrolase A388_00412 IPR037031 A388_00412 A388_00413 IPR007036 Succinylglutamate desuccinylase/aspartoacylase A388_00413 IPR016681 Succinylglutamate desuccinylase A388_00416 IPR000209 Peptidase S8/S53 domain A388_00416 IPR015500 Peptidase S8, subtilisin-related A388_00416 IPR023827 Peptidase S8, subtilisin, Asp-active site A388_00416 IPR023828 Peptidase S8, subtilisin, Ser-active site A388_00416 IPR036852 A388_00416 A388_00419 IPR000847 Transcription regulator HTH, LysR A388_00419 IPR005119 LysR, substrate-binding A388_00419 IPR036388 A388_00419 A388_00419 IPR036390 A388_00419 A388_00420 IPR000620 Drug/metabolite transporter A388_00421 IPR005545 YCII-related A388_00421 IPR011008 Dimeric alpha-beta barrel A388_00422 IPR004919 Domain of unknown function DUF262 A388_00424 IPR008909 DALR anticodon binding A388_00424 IPR015944 Glycine-tRNA ligase, beta subunit A388_00425 IPR002310 Glycine-tRNA ligase, alpha subunit A388_00426 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG A388_00426 IPR005829 Sugar transporter, conserved site A388_00426 IPR011701 Major facilitator superfamily A388_00426 IPR036259 A388_00426 A388_00427 IPR010994 RuvA domain 2-like A388_00427 IPR013785 Aldolase-type TIM barrel A388_00427 IPR023874 DNA modification/repair radical SAM protein, putative A388_00428 IPR023875 DNA metabolism protein, putative A388_00428 IPR025404 Domain of unknown function DUF4130 A388_00429 IPR000644 CBS domain A388_00429 IPR007065 HPP A388_00430 IPR007168 Phage shock protein, PspC, N-terminal A388_00432 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_00432 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_00432 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_00432 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_00432 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria A388_00432 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain A388_00432 IPR036250 A388_00432 A388_00432 IPR037069 A388_00432 A388_00434 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase A388_00434 IPR011342 Shikimate dehydrogenase A388_00434 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal A388_00434 IPR022893 Shikimate, quinate/shikimate dehydrogenase A388_00434 IPR036291 A388_00434 A388_00435 IPR001260 Coproporphyrinogen III oxidase, aerobic A388_00435 IPR018375 Coproporphyrinogen III oxidase, conserved site A388_00435 IPR036406 A388_00435 A388_00436 IPR000926 GTP cyclohydrolase II, RibA A388_00436 IPR032677 A388_00436 A388_00436 IPR036144 A388_00436 A388_00437 IPR005475 Transketolase-like, pyrimidine-binding domain A388_00437 IPR005477 Deoxyxylulose-5-phosphate synthase A388_00437 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II A388_00437 IPR020826 Transketolase binding site A388_00437 IPR029061 Thiamin diphosphate-binding fold A388_00437 IPR033248 A388_00437 A388_00438 IPR000760 Inositol monophosphatase A388_00438 IPR020550 Inositol monophosphatase, conserved site A388_00438 IPR020583 Inositol monophosphatase, metal-binding site A388_00438 IPR022337 Inositol monophosphatase, SuhB A388_00439 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site A388_00439 IPR001650 Helicase, C-terminal A388_00439 IPR011545 DEAD/DEAH box helicase domain A388_00439 IPR014001 Helicase, superfamily 1/2, ATP-binding domain A388_00439 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00441 IPR003439 ABC transporter-like A388_00441 IPR003593 AAA+ ATPase domain A388_00441 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00442 IPR003453 Permease domain A388_00442 IPR030802 A388_00442 A388_00443 IPR003399 Mammalian cell entry-related A388_00444 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC A388_00445 IPR002645 STAS domain A388_00445 IPR036513 A388_00445 A388_00446 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB A388_00447 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG A388_00447 IPR031100 A388_00447 A388_00448 IPR000086 NUDIX hydrolase domain A388_00448 IPR015797 NUDIX hydrolase domain-like A388_00448 IPR020084 NUDIX hydrolase, conserved site A388_00449 IPR000836 Phosphoribosyltransferase domain A388_00449 IPR029057 Phosphoribosyltransferase-like A388_00450 IPR001650 Helicase, C-terminal A388_00450 IPR004609 ATP-dependent DNA helicase RecG A388_00450 IPR011545 DEAD/DEAH box helicase domain A388_00450 IPR012340 Nucleic acid-binding, OB-fold A388_00450 IPR014001 Helicase, superfamily 1/2, ATP-binding domain A388_00450 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00450 IPR033454 A388_00450 A388_00451 IPR016040 NAD(P)-binding domain A388_00451 IPR036291 A388_00451 A388_00452 IPR018389 Bacterial extracellular solute-binding protein, family 7 A388_00452 IPR038404 A388_00452 A388_00453 IPR002123 Phospholipid/glycerol acyltransferase A388_00453 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase A388_00453 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB A388_00454 IPR029069 HotDog domain A388_00455 IPR001991 Sodium:dicarboxylate symporter A388_00455 IPR036458 A388_00455 A388_00456 IPR016516 Uncharacterised conserved protein UCP07580 A388_00457 IPR006073 GTP binding domain A388_00457 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC A388_00457 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00458 IPR000944 Transcription regulator Rrf2-like A388_00458 IPR036388 A388_00458 A388_00458 IPR036390 A388_00458 A388_00459 IPR000971 Globin A388_00459 IPR009050 Globin-like A388_00459 IPR012292 Globin, structural domain A388_00459 IPR017938 Riboflavin synthase-like beta-barrel A388_00460 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00460 IPR033186 A388_00460 A388_00461 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme A388_00461 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_00461 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_00461 IPR015424 Pyridoxal phosphate-dependent transferase A388_00462 IPR017926 Glutamine amidotransferase A388_00462 IPR029062 Class I glutamine amidotransferase-like A388_00463 IPR001848 Ribosomal protein S10 A388_00463 IPR018268 Ribosomal protein S10, conserved site A388_00463 IPR027486 Ribosomal protein S10 domain A388_00463 IPR036838 A388_00463 A388_00464 IPR000597 Ribosomal protein L3 A388_00464 IPR009000 Translation protein, beta-barrel domain A388_00464 IPR019926 Ribosomal protein L3, conserved site A388_00464 IPR019927 Ribosomal protein L3, bacterial/organelle-type A388_00465 IPR002136 Ribosomal protein L4/L1e A388_00465 IPR013005 Ribosomal protein L4/L1e, bacterial-type A388_00465 IPR023574 Ribosomal protein L4 domain A388_00466 IPR012677 Nucleotide-binding, alpha-beta plait A388_00466 IPR012678 Ribosomal protein L23/L15e core domain A388_00466 IPR013025 Ribosomal protein L25/L23 A388_00467 IPR002171 Ribosomal protein L2 A388_00467 IPR005880 Ribosomal protein L2, bacterial/organellar-type A388_00467 IPR008991 Translation protein SH3-like domain A388_00467 IPR012340 Nucleic acid-binding, OB-fold A388_00467 IPR014722 Ribosomal protein L2 domain 2 A388_00467 IPR014726 Ribosomal protein L2, domain 3 A388_00467 IPR022666 Ribosomal Proteins L2, RNA binding domain A388_00467 IPR022669 Ribosomal protein L2, C-terminal A388_00468 IPR002222 Ribosomal protein S19/S15 A388_00468 IPR005732 Ribosomal protein S19, bacterial-type A388_00468 IPR020934 Ribosomal protein S19 conserved site A388_00468 IPR023575 Ribosomal protein S19, superfamily A388_00469 IPR001063 Ribosomal protein L22/L17 A388_00469 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type A388_00469 IPR018260 Ribosomal protein L22/L17, conserved site A388_00469 IPR036394 A388_00469 A388_00470 IPR001351 Ribosomal protein S3, C-terminal A388_00470 IPR004044 K Homology domain, type 2 A388_00470 IPR004087 K Homology domain A388_00470 IPR005704 Ribosomal protein S3, bacterial A388_00470 IPR009019 K homology domain, prokaryotic type A388_00470 IPR015946 K homology domain-like, alpha/beta A388_00470 IPR018280 Ribosomal protein S3, conserved site A388_00470 IPR036419 A388_00470 A388_00471 IPR000114 Ribosomal protein L16 A388_00471 IPR016180 Ribosomal protein L10e/L16 A388_00471 IPR020798 Ribosomal protein L16, conserved site A388_00471 IPR036920 A388_00471 A388_00472 IPR001854 Ribosomal protein L29 A388_00472 IPR036049 A388_00472 A388_00473 IPR000266 Ribosomal protein S17 A388_00473 IPR012340 Nucleic acid-binding, OB-fold A388_00473 IPR019979 Ribosomal protein S17, conserved site A388_00473 IPR019984 Ribosomal protein S17, bacterial-type A388_00474 IPR000218 Ribosomal protein L14b/L23e A388_00474 IPR005745 Ribosomal protein L14, bacterial-type A388_00474 IPR019972 Ribosomal protein L14 conserved site A388_00474 IPR036853 A388_00474 A388_00475 IPR003256 Ribosomal protein L24 A388_00475 IPR005824 KOW A388_00475 IPR005825 Ribosomal protein L24/L26, conserved site A388_00475 IPR008991 Translation protein SH3-like domain A388_00475 IPR014722 Ribosomal protein L2 domain 2 A388_00476 IPR002132 Ribosomal protein L5 A388_00476 IPR020929 Ribosomal protein L5, conserved site A388_00476 IPR020930 Ribosomal protein L5, bacterial-type A388_00476 IPR022803 Ribosomal protein L5 domain A388_00476 IPR031309 A388_00476 A388_00476 IPR031310 A388_00476 A388_00477 IPR001209 Ribosomal protein S14 A388_00477 IPR018271 Ribosomal protein S14, conserved site A388_00477 IPR023036 Ribosomal protein S14, bacterial/plastid A388_00478 IPR000630 Ribosomal protein S8 A388_00478 IPR035987 A388_00478 A388_00479 IPR000702 Ribosomal protein L6 A388_00479 IPR002358 Ribosomal protein L6, conserved site A388_00479 IPR019906 Ribosomal protein L6, bacterial-type A388_00479 IPR020040 Ribosomal protein L6, alpha-beta domain A388_00479 IPR036789 A388_00479 A388_00480 IPR004389 Ribosomal protein L18, bacterial-type A388_00480 IPR005484 Ribosomal protein L18/L5 A388_00481 IPR005324 Ribosomal protein S5, C-terminal A388_00481 IPR005712 Ribosomal protein S5, bacterial-type A388_00481 IPR013810 Ribosomal protein S5, N-terminal A388_00481 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup A388_00481 IPR018192 Ribosomal protein S5, N-terminal, conserved site A388_00481 IPR020568 Ribosomal protein S5 domain 2-type fold A388_00482 IPR005996 Ribosomal protein L30, bacterial-type A388_00482 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain A388_00482 IPR036919 A388_00482 A388_00483 IPR001196 Ribosomal protein L15, conserved site A388_00483 IPR005749 Ribosomal protein L15, bacterial-type A388_00483 IPR021131 Ribosomal protein L18e/L15P A388_00483 IPR030878 A388_00483 A388_00483 IPR036227 A388_00483 A388_00484 IPR002208 SecY/SEC61-alpha family A388_00484 IPR023201 SecY subunit domain A388_00484 IPR026593 Protein translocase subunit SecY A388_00484 IPR030659 A388_00484 A388_00485 IPR000473 Ribosomal protein L36 A388_00485 IPR035977 A388_00485 A388_00486 IPR001892 Ribosomal protein S13 A388_00486 IPR010979 Ribosomal protein S13-like, H2TH A388_00486 IPR018269 Ribosomal protein S13, conserved site A388_00486 IPR019980 Ribosomal protein S13, bacterial-type A388_00486 IPR027437 30s ribosomal protein S13, C-terminal A388_00487 IPR001971 Ribosomal protein S11 A388_00487 IPR018102 Ribosomal S11, conserved site A388_00487 IPR019981 Ribosomal protein S11, bacterial-type A388_00487 IPR036967 A388_00487 A388_00488 IPR001912 Ribosomal protein S4/S9, N-terminal A388_00488 IPR002942 RNA-binding S4 domain A388_00488 IPR005709 Ribosomal protein S4, bacterial-type A388_00488 IPR018079 Ribosomal protein S4, conserved site A388_00488 IPR036986 A388_00488 A388_00489 IPR011260 RNA polymerase, alpha subunit, C-terminal A388_00489 IPR011262 DNA-directed RNA polymerase, insert domain A388_00489 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type A388_00489 IPR011773 DNA-directed RNA polymerase, alpha subunit A388_00489 IPR036603 A388_00489 A388_00489 IPR036643 A388_00489 A388_00490 IPR000456 Ribosomal protein L17 A388_00490 IPR036373 A388_00490 A388_00491 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II A388_00491 IPR020946 Flavin monooxygenase-like A388_00491 IPR036188 A388_00491 A388_00492 IPR006089 Acyl-CoA dehydrogenase, conserved site A388_00492 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_00492 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_00492 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_00492 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_00492 IPR036250 A388_00492 A388_00492 IPR037069 A388_00492 A388_00493 IPR005631 Flavinator of succinate dehydrogenase A388_00493 IPR036714 A388_00493 A388_00497 IPR022764 Peptidase S54, rhomboid domain A388_00497 IPR023826 Rhomboid-like serine protease, proteobacteria A388_00497 IPR035952 A388_00497 A388_00498 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit A388_00500 IPR012658 Conserved hypothetical protein CHP02443 A388_00501 IPR001567 Peptidase M3A/M3B A388_00501 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 A388_00502 IPR001900 A388_00502 A388_00502 IPR003029 Ribosomal protein S1, RNA-binding domain A388_00502 IPR004476 Ribonuclease II/ribonuclease R A388_00502 IPR011805 Ribonuclease R A388_00502 IPR012340 Nucleic acid-binding, OB-fold A388_00502 IPR013223 Ribonuclease B, N-terminal OB domain A388_00502 IPR022966 Ribonuclease II/R, conserved site A388_00502 IPR022967 RNA-binding domain, S1 A388_00506 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial A388_00506 IPR023214 HAD-like domain A388_00506 IPR036412 A388_00506 A388_00507 IPR001584 Integrase, catalytic core A388_00507 IPR012337 Ribonuclease H-like domain A388_00507 IPR025246 Transposase IS30-like HTH domain A388_00507 IPR036397 A388_00507 A388_00510 IPR000415 Nitroreductase-like A388_00510 IPR029479 Nitroreductase A388_00512 IPR011234 Fumarylacetoacetase, C-terminal-related A388_00512 IPR036663 A388_00512 A388_00513 IPR003313 AraC-type arabinose-binding/dimerisation domain A388_00513 IPR009057 Homeodomain-like A388_00513 IPR011051 RmlC-like cupin domain A388_00513 IPR014710 RmlC-like jelly roll fold A388_00513 IPR018060 DNA binding HTH domain, AraC-type A388_00513 IPR018062 HTH domain AraC-type, conserved site A388_00513 IPR020449 Transcription regulator HTH, AraC- type A388_00514 IPR000620 Drug/metabolite transporter A388_00515 IPR017039 Virulence factor BrkB A388_00515 IPR023679 Uncharacterised protein family UPF0761, bacterial A388_00516 IPR001226 Flavodoxin, conserved site A388_00516 IPR005025 NADPH-dependent FMN reductase-like A388_00516 IPR010089 Flavoprotein WrbA A388_00516 IPR029039 Flavoprotein-like A388_00517 IPR010079 Xanthine phosphoribosyltransferase A388_00517 IPR029057 Phosphoribosyltransferase-like A388_00518 IPR021457 Protein of unknown function DUF3108 A388_00520 IPR006260 TonB, C-terminal A388_00520 IPR037682 A388_00520 A388_00521 IPR002036 Endoribonuclease YbeY A388_00521 IPR020549 Endoribonuclease YbeY, conserved site A388_00521 IPR023091 Metalloprotease catalytic domain, predicted A388_00522 IPR003714 PhoH-like protein A388_00522 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00522 IPR036612 A388_00522 A388_00523 IPR002792 TRAM domain A388_00523 IPR005839 Methylthiotransferase A388_00523 IPR006463 tRNA-i(6)A37 modification enzyme MiaB A388_00523 IPR006638 Elongator protein 3/MiaB/NifB A388_00523 IPR007197 Radical SAM A388_00523 IPR013848 Methylthiotransferase, N-terminal A388_00523 IPR020612 Methylthiotransferase, conserved site A388_00523 IPR023404 Radical SAM, alpha/beta horseshoe A388_00523 IPR038135 A388_00523 A388_00524 IPR008258 Lytic transglycosylase-like SLT domain A388_00524 IPR008939 Lytic transglycosylase, superhelical U-shaped A388_00524 IPR023346 Lysozyme-like domain A388_00525 IPR001568 Ribonuclease T2-like A388_00525 IPR036430 A388_00525 A388_00526 IPR001236 Lactate/malate dehydrogenase, N-terminal A388_00526 IPR001557 L-lactate/malate dehydrogenase A388_00526 IPR010945 Malate dehydrogenase, type 2 A388_00526 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal A388_00526 IPR022383 Lactate/malate dehydrogenase, C-terminal A388_00526 IPR036291 A388_00526 A388_00527 IPR021250 Protein of unknown function DUF2789 A388_00529 IPR005123 Oxoglutarate/iron-dependent dioxygenase A388_00529 IPR006620 Prolyl 4-hydroxylase, alpha subunit A388_00530 IPR007473 Ribosomal RNA large subunit methyltransferase J A388_00530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_00531 IPR000462 CDP-alcohol phosphatidyltransferase A388_00531 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase A388_00535 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V A388_00535 IPR011057 Mss4-like A388_00536 IPR025352 Protein of unknown function DUF4256 A388_00537 IPR006089 Acyl-CoA dehydrogenase, conserved site A388_00537 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_00537 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_00537 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_00537 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_00537 IPR036250 A388_00537 A388_00537 IPR037069 A388_00537 A388_00538 IPR001647 DNA-binding HTH domain, TetR-type A388_00538 IPR009057 Homeodomain-like A388_00538 IPR023772 DNA-binding HTH domain, TetR-type, conserved site A388_00538 IPR036271 A388_00538 A388_00539 IPR010839 Protein of unknown function DUF1446 A388_00540 IPR002347 Glucose/ribitol dehydrogenase A388_00540 IPR036291 A388_00540 A388_00541 IPR029045 ClpP/crotonase-like domain A388_00541 IPR034733 A388_00541 A388_00542 IPR006089 Acyl-CoA dehydrogenase, conserved site A388_00542 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_00542 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_00542 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_00542 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_00542 IPR036250 A388_00542 A388_00542 IPR037069 A388_00542 A388_00543 IPR001753 Crotonase superfamily A388_00543 IPR014748 Crontonase, C-terminal A388_00543 IPR029045 ClpP/crotonase-like domain A388_00544 IPR000089 Biotin/lipoyl attachment A388_00544 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site A388_00544 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain A388_00544 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal A388_00544 IPR005482 Biotin carboxylase, C-terminal A388_00544 IPR011053 Single hybrid motif A388_00544 IPR011054 Rudiment single hybrid motif A388_00544 IPR016185 Pre-ATP-grasp domain A388_00546 IPR007481 Stringent starvation protein B A388_00546 IPR036760 A388_00546 A388_00547 IPR004045 Glutathione S-transferase, N-terminal A388_00547 IPR036249 A388_00547 A388_00547 IPR036282 A388_00547 A388_00548 IPR000754 Ribosomal protein S9 A388_00548 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup A388_00548 IPR020568 Ribosomal protein S5 domain 2-type fold A388_00548 IPR020574 Ribosomal protein S9, conserved site A388_00548 IPR023035 Ribosomal protein S9, bacterial/plastid A388_00549 IPR005822 Ribosomal protein L13 A388_00549 IPR005823 Ribosomal protein L13, bacterial-type A388_00549 IPR036899 A388_00549 A388_00550 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA A388_00550 IPR037510 A388_00550 A388_00551 IPR001737 Ribosomal RNA adenine methylase transferase A388_00551 IPR011530 Ribosomal RNA adenine dimethylase A388_00551 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site A388_00551 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal A388_00551 IPR023165 rRNA adenine dimethylase-like A388_00551 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_00552 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) A388_00552 IPR004843 Calcineurin-like phosphoesterase domain, apaH type A388_00552 IPR029052 Metallo-dependent phosphatase-like A388_00553 IPR019223 Domain of unknown function DUF2147 A388_00554 IPR007300 CidB/LrgB family A388_00556 IPR006073 GTP binding domain A388_00556 IPR016496 GTPase HflX A388_00556 IPR025121 GTPase HflX N-terminal domain A388_00556 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00556 IPR032305 A388_00556 A388_00557 IPR002123 Phospholipid/glycerol acyltransferase A388_00558 IPR001736 Phospholipase D/Transphosphatidylase A388_00558 IPR025202 Phospholipase D-like domain A388_00559 IPR004843 Calcineurin-like phosphoesterase domain, apaH type A388_00559 IPR029052 Metallo-dependent phosphatase-like A388_00560 IPR006664 Outer membrane protein, bacterial A388_00560 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal A388_00560 IPR006690 Outer membrane protein, OmpA-like, conserved site A388_00560 IPR036737 A388_00560 A388_00561 IPR000160 GGDEF domain A388_00561 IPR029787 Nucleotide cyclase A388_00561 IPR033417 A388_00561 A388_00562 IPR025293 Protein of unknown function DUF4154 A388_00565 IPR001100 A388_00565 A388_00565 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A388_00565 IPR016156 FAD/NAD-linked reductase, dimerisation domain A388_00565 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_00565 IPR036188 A388_00565 A388_00567 IPR005939 Beta-lactamase hydrolase-like A388_00567 IPR029021 Protein-tyrosine phosphatase-like A388_00568 IPR022742 Putative lysophospholipase A388_00568 IPR029058 Alpha/Beta hydrolase fold A388_00569 IPR005746 Thioredoxin A388_00569 IPR013766 Thioredoxin domain A388_00569 IPR017937 Thioredoxin, conserved site A388_00569 IPR036249 A388_00569 A388_00570 IPR006683 Thioesterase superfamily A388_00570 IPR029069 HotDog domain A388_00571 IPR027961 Protein of unknown function DUF4442 A388_00571 IPR029069 HotDog domain A388_00572 IPR007551 Protein of unknown function DUF520 A388_00572 IPR035570 A388_00572 A388_00572 IPR035571 A388_00572 A388_00572 IPR036183 A388_00572 A388_00573 IPR001763 Rhodanese-like domain A388_00573 IPR036873 A388_00573 A388_00574 IPR006076 FAD dependent oxidoreductase A388_00574 IPR008471 MnmC-like methyltransferase A388_00574 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal A388_00574 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC A388_00574 IPR036188 A388_00574 A388_00576 IPR005545 YCII-related A388_00576 IPR011008 Dimeric alpha-beta barrel A388_00577 IPR006008 Intracellular septation protein A A388_00578 IPR003141 Polymerase/histidinol phosphatase, N-terminal A388_00578 IPR004013 PHP, C-terminal A388_00578 IPR016195 Polymerase/histidinol phosphatase-like A388_00579 IPR021134 Bestrophin/UPF0187 A388_00580 IPR001405 RadC protein A388_00580 IPR010994 RuvA domain 2-like A388_00580 IPR025657 RadC-like JAB domain A388_00581 IPR003382 Flavoprotein A388_00581 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC A388_00581 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal A388_00581 IPR035929 A388_00581 A388_00581 IPR036551 A388_00581 A388_00582 IPR005665 Protein-export membrane protein SecF, bacterial A388_00582 IPR022645 Protein-export membrane protein SecD/SecF, bacterial A388_00582 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site A388_00582 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial A388_00583 IPR001036 Acriflavin resistance protein A388_00583 IPR005791 Protein translocase subunit SecD A388_00583 IPR022645 Protein-export membrane protein SecD/SecF, bacterial A388_00583 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site A388_00583 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial A388_00583 IPR027398 SecD export protein N-terminal TM domain A388_00584 IPR003849 Preprotein translocase YajC A388_00585 IPR002616 tRNA-guanine(15) transglycosylase-like A388_00585 IPR004803 Queuine tRNA-ribosyltransferase A388_00585 IPR036511 A388_00585 A388_00586 IPR007156 LemA A388_00586 IPR023353 LemA-like domain A388_00588 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA A388_00588 IPR036100 A388_00588 A388_00590 IPR002104 Integrase, catalytic A388_00590 IPR010998 Integrase, Lambda-type, N-terminal A388_00590 IPR011010 DNA breaking-rejoining enzyme, catalytic core A388_00590 IPR013762 Integrase-like, catalytic core A388_00593 IPR012337 Ribonuclease H-like domain A388_00593 IPR013520 Exonuclease, RNase T/DNA polymerase III A388_00593 IPR036397 A388_00593 A388_00594 IPR000424 Primosome PriB/single-strand DNA-binding A388_00594 IPR011344 Single-stranded DNA-binding protein A388_00594 IPR012340 Nucleic acid-binding, OB-fold A388_00597 IPR024252 Protein of unknown function DUF2528 A388_00601 IPR001387 Cro/C1-type helix-turn-helix domain A388_00601 IPR010982 Lambda repressor-like, DNA-binding domain A388_00605 IPR002559 Transposase, IS4-like A388_00605 IPR012337 Ribonuclease H-like domain A388_00606 IPR002559 Transposase, IS4-like A388_00606 IPR012337 Ribonuclease H-like domain A388_00609 IPR000962 Zinc finger, DksA/TraR C4-type A388_00610 IPR007684 Zinc finger, Ogr/Delta-type A388_00612 IPR009734 Myoviridae, GpU A388_00612 IPR016912 Bacteriophage P2, GpU A388_00613 IPR010090 Phage tail tape measure protein A388_00614 IPR019289 Bacteriophage tail protein Gp41, putative A388_00615 IPR006498 Bacteriophage P2, FII, major tail tube protein A388_00616 IPR020287 Tail sheath protein, C-terminal domain A388_00616 IPR035089 A388_00616 A388_00617 IPR011050 Pectin lyase fold/virulence factor A388_00617 IPR012334 Pectin lyase fold A388_00617 IPR022225 Phage tail fibre protein A388_00618 IPR006521 Tail protein I A388_00619 IPR006949 Baseplate assembly protein J-like, predicted A388_00619 IPR014507 Baseplate assembly protein J, predicted A388_00620 IPR007048 GpW/Gp25/anti-adapter protein IraD A388_00621 IPR006531 Gp5 N-terminal A388_00621 IPR013046 Bacteriophage Mu/P2, baseplate assembly A388_00621 IPR037026 A388_00621 A388_00622 IPR006522 Phage virion morphogensis protein A388_00623 IPR009678 Bacteriophage tail completion protein R A388_00624 IPR002477 Peptidoglycan binding-like A388_00624 IPR024408 Domain of unknown function DUF3380 A388_00624 IPR036365 A388_00624 A388_00624 IPR036366 A388_00624 A388_00625 IPR008473 Bacteriophage D3, Orf90 A388_00626 IPR032637 A388_00626 A388_00627 IPR008861 Bacteriophage P2, GpX A388_00627 IPR036779 A388_00627 A388_00628 IPR009225 Bacteriophage head completion protein GpL A388_00629 IPR010270 Bacteriophage P2, GpM A388_00629 IPR011990 Tetratricopeptide-like helical domain A388_00629 IPR019734 Tetratricopeptide repeat A388_00630 IPR006441 Bacteriophage P2, GpN, major capsid A388_00631 IPR009228 Capsid scaffolding protein GpO A388_00632 IPR004921 Terminase, large subunit A388_00632 IPR010332 ATPase terminase subunit, putative A388_00632 IPR035421 A388_00632 A388_00633 IPR006430 Phage portal protein, PBSX family A388_00633 IPR006944 Bacteriophage/Gene transfer agent portal protein A388_00633 IPR030935 A388_00633 A388_00634 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_00634 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain A388_00634 IPR004358 Signal transduction histidine kinase-related protein, C-terminal A388_00634 IPR036097 A388_00634 A388_00634 IPR036890 A388_00634 A388_00635 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain A388_00635 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase A388_00635 IPR023057 Glutamate-ammonia-ligase adenylyltransferase A388_00636 IPR001544 Aminotransferase, class IV A388_00636 IPR005785 Branched-chain amino acid aminotransferase I A388_00636 IPR036038 A388_00636 A388_00637 IPR009367 Mitochondrial fission protein ELM1-like A388_00639 IPR002509 Polysaccharide deacetylase A388_00639 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel A388_00640 IPR001173 Glycosyltransferase 2-like A388_00640 IPR029044 Nucleotide-diphospho-sugar transferases A388_00641 IPR001296 Glycosyl transferase, family 1 A388_00641 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain A388_00642 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain A388_00643 IPR002654 Glycosyl transferase, family 25 A388_00646 IPR021520 Protein of unknown function DUF3184 A388_00646 IPR031357 A388_00646 A388_00647 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb A388_00647 IPR004115 GAD-like domain A388_00647 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) A388_00647 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type A388_00647 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type A388_00647 IPR012340 Nucleic acid-binding, OB-fold A388_00647 IPR029351 GAD domain A388_00648 IPR025238 Protein of unknown function DUF4184 A388_00649 IPR000531 TonB-dependent receptor, beta-barrel A388_00649 IPR010917 TonB-dependent receptor, conserved site A388_00649 IPR012910 TonB-dependent receptor, plug A388_00649 IPR036942 A388_00649 A388_00649 IPR037066 A388_00649 A388_00650 IPR025202 Phospholipase D-like domain A388_00652 IPR024572 Protein of unknown function DUF3315 A388_00653 IPR009315 Phosphate-starvation-induced PsiE A388_00653 IPR020948 Phosphate-starvation-induced PsiE-like A388_00654 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_00654 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_00654 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_00654 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_00654 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria A388_00654 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain A388_00654 IPR036250 A388_00654 A388_00654 IPR037069 A388_00654 A388_00655 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_00655 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_00655 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_00655 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_00655 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria A388_00655 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain A388_00655 IPR036250 A388_00655 A388_00655 IPR037069 A388_00655 A388_00657 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_00657 IPR003660 HAMP linker domain A388_00657 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain A388_00657 IPR004358 Signal transduction histidine kinase-related protein, C-terminal A388_00657 IPR036097 A388_00657 A388_00657 IPR036890 A388_00657 A388_00658 IPR001789 Signal transduction response regulator, receiver domain A388_00658 IPR001867 Signal transduction response regulator, C-terminal A388_00658 IPR011006 CheY-like superfamily A388_00658 IPR016032 Signal transduction response regulator, C-terminal effector A388_00658 IPR036388 A388_00658 A388_00659 IPR003846 Uncharacterised protein family UPF0061 A388_00660 IPR005804 Fatty acid desaturase, type 1 A388_00660 IPR009160 Delta-9 acyl-CoA desaturase, haem/steroid binding domain-containing A388_00660 IPR015876 Fatty acid desaturase, type 1, core A388_00661 IPR005184 Domain of unknown function DUF306, Meta/HslJ A388_00661 IPR038670 A388_00661 A388_00662 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain A388_00662 IPR030395 A388_00662 A388_00663 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like A388_00663 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type A388_00663 IPR036451 A388_00663 A388_00664 IPR000531 TonB-dependent receptor, beta-barrel A388_00664 IPR012910 TonB-dependent receptor, plug A388_00664 IPR036942 A388_00664 A388_00664 IPR037066 A388_00664 A388_00665 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain A388_00665 IPR011060 Ribulose-phosphate binding barrel A388_00665 IPR013785 Aldolase-type TIM barrel A388_00666 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme A388_00666 IPR006653 Tryptophan synthase, beta chain, conserved site A388_00666 IPR006654 Tryptophan synthase, beta chain A388_00666 IPR023026 Tryptophan synthase beta chain/beta chain-like A388_00666 IPR036052 A388_00666 A388_00667 IPR011440 Domain of unknown function DUF1543 A388_00668 IPR021243 Protein of unknown function DUF2804 A388_00669 IPR009078 Ferritin-like superfamily A388_00669 IPR016516 Uncharacterised conserved protein UCP07580 A388_00670 IPR009057 Homeodomain-like A388_00670 IPR018060 DNA binding HTH domain, AraC-type A388_00670 IPR032687 A388_00670 A388_00671 IPR002028 Tryptophan synthase, alpha chain A388_00671 IPR011060 Ribulose-phosphate binding barrel A388_00671 IPR013785 Aldolase-type TIM barrel A388_00671 IPR018204 Tryptophan synthase, alpha chain, active site A388_00672 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit A388_00672 IPR029045 ClpP/crotonase-like domain A388_00672 IPR034733 A388_00672 A388_00673 IPR001645 Folylpolyglutamate synthetase A388_00673 IPR004101 Mur ligase, C-terminal A388_00673 IPR013221 Mur ligase, central A388_00673 IPR018109 Folylpolyglutamate synthetase, conserved site A388_00673 IPR036565 A388_00673 A388_00673 IPR036615 A388_00673 A388_00674 IPR007730 Sporulation-related domain A388_00674 IPR036680 A388_00674 A388_00675 IPR000340 Dual specificity phosphatase, catalytic domain A388_00675 IPR016130 Protein-tyrosine phosphatase, active site A388_00675 IPR029021 Protein-tyrosine phosphatase-like A388_00676 IPR001279 Beta-lactamase-like A388_00676 IPR036866 A388_00676 A388_00677 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant A388_00677 IPR019479 Peroxiredoxin, C-terminal A388_00677 IPR024706 Peroxiredoxin, AhpC-type A388_00677 IPR036249 A388_00677 A388_00678 IPR000185 Protein translocase subunit SecA A388_00678 IPR004027 SEC-C motif A388_00678 IPR011115 SecA DEAD-like, N-terminal A388_00678 IPR011116 SecA Wing/Scaffold A388_00678 IPR011130 SecA preprotein, cross-linking domain A388_00678 IPR020937 SecA conserved site A388_00678 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00678 IPR036266 A388_00678 A388_00678 IPR036670 A388_00678 A388_00680 IPR004736 Citrate-proton symport A388_00680 IPR005828 General substrate transporter A388_00680 IPR005829 Sugar transporter, conserved site A388_00680 IPR036259 A388_00680 A388_00681 IPR004254 Hly-III-related A388_00681 IPR005744 HylII A388_00682 IPR025714 Methyltransferase domain A388_00682 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_00683 IPR000182 GNAT domain A388_00683 IPR016181 Acyl-CoA N-acyltransferase A388_00684 IPR002641 Patatin/Phospholipase A2-related A388_00684 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase A388_00686 IPR001753 Crotonase superfamily A388_00686 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal A388_00686 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding A388_00686 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_00686 IPR029045 ClpP/crotonase-like domain A388_00686 IPR036291 A388_00686 A388_00687 IPR002155 Thiolase A388_00687 IPR016039 Thiolase-like A388_00687 IPR020610 Thiolase, active site A388_00687 IPR020613 Thiolase, conserved site A388_00687 IPR020615 Thiolase, acyl-enzyme intermediate active site A388_00687 IPR020616 Thiolase, N-terminal A388_00687 IPR020617 Thiolase, C-terminal A388_00688 IPR009057 Homeodomain-like A388_00688 IPR018060 DNA binding HTH domain, AraC-type A388_00688 IPR020449 Transcription regulator HTH, AraC- type A388_00688 IPR032687 A388_00688 A388_00689 IPR003673 CoA-transferase family III A388_00689 IPR023606 CoA-transferase family III domain A388_00690 IPR007049 Carbohydrate-selective porin OprB A388_00690 IPR038673 A388_00690 A388_00691 IPR001479 Quinoprotein dehydrogenase, conserved site A388_00691 IPR002372 Pyrrolo-quinoline quinone repeat A388_00691 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily A388_00691 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related A388_00691 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat A388_00692 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain A388_00692 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site A388_00692 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain A388_00692 IPR036136 A388_00692 A388_00693 IPR008318 Uncharacterised conserved protein UCP030820 A388_00694 IPR000390 Small multidrug resistance protein family A388_00695 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain A388_00695 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase A388_00696 IPR002155 Thiolase A388_00696 IPR016039 Thiolase-like A388_00696 IPR020610 Thiolase, active site A388_00696 IPR020615 Thiolase, acyl-enzyme intermediate active site A388_00696 IPR020616 Thiolase, N-terminal A388_00696 IPR020617 Thiolase, C-terminal A388_00697 IPR012902 Prokaryotic N-terminal methylation site A388_00697 IPR022346 General secretion pathway, GspH A388_00698 IPR006664 Outer membrane protein, bacterial A388_00698 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal A388_00698 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel A388_00698 IPR027385 Outer membrane protein beta-barrel A388_00698 IPR036737 A388_00698 A388_00700 IPR001233 tRNA-splicing ligase, RtcB A388_00700 IPR036025 A388_00700 A388_00701 IPR002293 Amino acid/polyamine transporter I A388_00701 IPR004840 Amino acid permease, conserved site A388_00701 IPR004841 Amino acid permease/ SLC12A domain A388_00702 IPR002052 DNA methylase, N-6 adenine-specific, conserved site A388_00702 IPR007848 Methyltransferase small domain A388_00702 IPR013675 Methyltransferase small, N-terminal A388_00702 IPR023543 rRNA small subunit methyltransferase C A388_00702 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_00703 IPR006042 Xanthine/uracil permease A388_00703 IPR006043 Xanthine/uracil/vitamin C permease A388_00703 IPR017588 Xanthine permease A388_00704 IPR000640 Translation elongation factor EFG, V domain A388_00704 IPR000795 Elongation factor, GTP-binding domain A388_00704 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 A388_00704 IPR005225 Small GTP-binding protein domain A388_00704 IPR006298 GTP-binding protein TypA A388_00704 IPR009000 Translation protein, beta-barrel domain A388_00704 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00704 IPR035647 A388_00704 A388_00705 IPR001185 Large-conductance mechanosensitive channel A388_00705 IPR019823 Large-conductance mechanosensitive channel, conserved site A388_00705 IPR036019 A388_00705 A388_00705 IPR037673 A388_00705 A388_00706 IPR009288 AIG2-like A388_00706 IPR036568 A388_00706 A388_00707 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type A388_00707 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site A388_00708 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase A388_00708 IPR010979 Ribosomal protein S13-like, H2TH A388_00708 IPR012319 DNA glycosylase/AP lyase, catalytic domain A388_00708 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding A388_00708 IPR020629 Formamidopyrimidine-DNA glycosylase A388_00708 IPR035937 A388_00708 A388_00709 IPR003180 Methylpurine-DNA glycosylase (MPG) A388_00709 IPR011034 Formyl transferase, C-terminal-like A388_00709 IPR036995 A388_00709 A388_00710 IPR000531 TonB-dependent receptor, beta-barrel A388_00710 IPR012910 TonB-dependent receptor, plug A388_00710 IPR036942 A388_00710 A388_00710 IPR037066 A388_00710 A388_00711 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal A388_00711 IPR013785 Aldolase-type TIM barrel A388_00712 IPR004776 Auxin efflux carrier A388_00713 IPR006597 Sel1-like A388_00713 IPR011990 Tetratricopeptide-like helical domain A388_00714 IPR009094 Disulphide bond isomerase, DsbC, N-terminal A388_00714 IPR012336 Thioredoxin-like fold A388_00714 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal A388_00714 IPR036249 A388_00714 A388_00715 IPR006222 Glycine cleavage T-protein, N-terminal A388_00715 IPR017703 YgfZ/GcvT conserved site A388_00716 IPR013538 Activator of Hsp90 ATPase homologue 1-like A388_00716 IPR023393 START-like domain A388_00717 IPR007438 Protein of unknown function DUF488 A388_00718 IPR004624 PhnA protein A388_00718 IPR013987 PhnA protein, N-terminal A388_00718 IPR013988 PhnA protein, C-terminal A388_00719 IPR010879 Domain of unknown function DUF1508 A388_00719 IPR036913 A388_00719 A388_00720 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain A388_00720 IPR002316 Proline-tRNA ligase, class IIa A388_00720 IPR004154 Anticodon-binding A388_00720 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type A388_00720 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain A388_00720 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 A388_00720 IPR036621 A388_00720 A388_00720 IPR036754 A388_00720 A388_00721 IPR001036 Acriflavin resistance protein A388_00721 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains A388_00722 IPR006143 RND efflux pump, membrane fusion protein A388_00722 IPR039562 A388_00722 A388_00724 IPR001789 Signal transduction response regulator, receiver domain A388_00724 IPR011006 CheY-like superfamily A388_00725 IPR001789 Signal transduction response regulator, receiver domain A388_00725 IPR011006 CheY-like superfamily A388_00726 IPR002545 CheW-like protein A388_00726 IPR036061 A388_00726 A388_00727 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain A388_00728 IPR001789 Signal transduction response regulator, receiver domain A388_00728 IPR002545 CheW-like protein A388_00728 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_00728 IPR004105 Histidine kinase CheA-like, homodimeric domain A388_00728 IPR004358 Signal transduction histidine kinase-related protein, C-terminal A388_00728 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain A388_00728 IPR011006 CheY-like superfamily A388_00728 IPR036061 A388_00728 A388_00728 IPR036641 A388_00728 A388_00728 IPR036890 A388_00728 A388_00730 IPR006638 Elongator protein 3/MiaB/NifB A388_00730 IPR007197 Radical SAM A388_00730 IPR023404 Radical SAM, alpha/beta horseshoe A388_00731 IPR022742 Putative lysophospholipase A388_00731 IPR029058 Alpha/Beta hydrolase fold A388_00732 IPR002933 Peptidase M20 A388_00732 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria A388_00732 IPR011650 Peptidase M20, dimerisation domain A388_00732 IPR036264 A388_00732 A388_00733 IPR012556 Entericidin EcnAB A388_00734 IPR015003 Protein of unknown function DUF1853 A388_00735 IPR007401 Protein of unknown function DUF454 A388_00736 IPR005490 L,D-transpeptidase catalytic domain A388_00736 IPR038063 A388_00736 A388_00743 IPR003848 Domain of unknown function DUF218 A388_00743 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_00744 IPR001094 Flavodoxin A388_00744 IPR001433 Oxidoreductase FAD/NAD(P)-binding A388_00744 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase A388_00744 IPR005625 PepSY-associated TM helix A388_00744 IPR008254 Flavodoxin/nitric oxide synthase A388_00744 IPR017938 Riboflavin synthase-like beta-barrel A388_00744 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 A388_00744 IPR029039 Flavoprotein-like A388_00744 IPR039261 A388_00744 A388_00745 IPR025588 YcxB-like protein A388_00746 IPR010019 Integral membrane protein, YccS A388_00746 IPR010020 Integral membrane protein, YccS/YhfK A388_00746 IPR032692 A388_00746 A388_00746 IPR036259 A388_00746 A388_00747 IPR004812 Drug resistance transporter Bcr/CmlA subfamily A388_00747 IPR011701 Major facilitator superfamily A388_00747 IPR036259 A388_00747 A388_00748 IPR000415 Nitroreductase-like A388_00748 IPR029479 Nitroreductase A388_00750 IPR001463 Sodium:alanine symporter A388_00751 IPR002641 Patatin/Phospholipase A2-related A388_00751 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase A388_00752 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme A388_00752 IPR005789 Threonine dehydratase, catabolic A388_00752 IPR036052 A388_00752 A388_00753 IPR009248 SbmA/BacA-like A388_00753 IPR036640 A388_00753 A388_00754 IPR032322 A388_00754 A388_00755 IPR009560 Protein of unknown function DUF1176 A388_00757 IPR002818 ThiJ/PfpI A388_00757 IPR006286 Peptidase C56, PfpI A388_00757 IPR029062 Class I glutamine amidotransferase-like A388_00758 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related A388_00758 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit A388_00758 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic A388_00758 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain A388_00758 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site A388_00758 IPR018027 Asn/Gln amidotransferase A388_00758 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal A388_00759 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit A388_00759 IPR020556 Amidase, conserved site A388_00759 IPR023631 Amidase signature domain A388_00759 IPR036928 A388_00759 A388_00760 IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit A388_00760 IPR036113 A388_00760 A388_00761 IPR004753 Cell shape determining protein MreB/Mrl A388_00762 IPR007221 Rod shape-determining protein MreC A388_00763 IPR007227 Cell shape-determining protein MreD A388_00764 IPR003697 Maf-like protein A388_00764 IPR029001 Inosine triphosphate pyrophosphatase-like A388_00765 IPR003029 Ribosomal protein S1, RNA-binding domain A388_00765 IPR004659 Ribonuclease E/G A388_00765 IPR012340 Nucleic acid-binding, OB-fold A388_00765 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G A388_00765 IPR022967 RNA-binding domain, S1 A388_00767 IPR004255 O-acyltransferase, WSD1, N-terminal A388_00767 IPR009721 O-acyltransferase, WSD1, C-terminal A388_00767 IPR014292 Acyltransferase, WS/DGAT/MGAT A388_00768 IPR002500 Phosphoadenosine phosphosulphate reductase A388_00768 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase A388_00768 IPR011798 Adenosine 5'-phosphosulphate reductase A388_00768 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_00769 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein A388_00769 IPR023214 HAD-like domain A388_00769 IPR036412 A388_00769 A388_00770 IPR005017 Membrane protein, aromatic hydrocarbon degradation A388_00771 IPR003680 Flavodoxin-like fold A388_00771 IPR029039 Flavoprotein-like A388_00772 IPR009057 Homeodomain-like A388_00772 IPR018060 DNA binding HTH domain, AraC-type A388_00772 IPR020449 Transcription regulator HTH, AraC- type A388_00772 IPR032687 A388_00772 A388_00773 IPR005804 Fatty acid desaturase, type 1 A388_00774 IPR013225 PaaX-like, C-terminal A388_00774 IPR036388 A388_00774 A388_00775 IPR003824 Undecaprenyl-diphosphatase UppP A388_00776 IPR009057 Homeodomain-like A388_00776 IPR009594 Transcription regulator HTH, AraC, N-terminal A388_00776 IPR018060 DNA binding HTH domain, AraC-type A388_00776 IPR018062 HTH domain AraC-type, conserved site A388_00777 IPR011032 GroES (chaperonin 10)-like A388_00777 IPR013149 Alcohol dehydrogenase, C-terminal A388_00777 IPR013154 Alcohol dehydrogenase GroES-like A388_00777 IPR014189 Quinone oxidoreductase PIG3 A388_00777 IPR020843 Polyketide synthase, enoylreductase A388_00777 IPR036291 A388_00777 A388_00778 IPR002818 ThiJ/PfpI A388_00778 IPR017283 Molecular chaperone Hsp31 and glyoxalase 3 A388_00778 IPR029062 Class I glutamine amidotransferase-like A388_00779 IPR010260 Bacteriophage P4, Orf88 A388_00784 IPR011335 Restriction endonuclease type II-like A388_00784 IPR011604 Exonuclease, phage-type/RecB, C-terminal A388_00789 IPR003356 DNA methylase, adenine-specific A388_00789 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_00789 IPR038333 A388_00789 A388_00791 IPR001387 Cro/C1-type helix-turn-helix domain A388_00791 IPR010982 Lambda repressor-like, DNA-binding domain A388_00791 IPR015927 Peptidase S24/S26A/S26B/S26C A388_00791 IPR036286 A388_00791 A388_00792 IPR010982 Lambda repressor-like, DNA-binding domain A388_00796 IPR003593 AAA+ ATPase domain A388_00796 IPR007693 DNA helicase, DnaB-like, N-terminal A388_00796 IPR007694 DNA helicase, DnaB-like, C-terminal A388_00796 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal A388_00796 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00796 IPR036185 A388_00796 A388_00814 IPR010373 Protein of unknown function DUF968 A388_00815 IPR036619 A388_00815 A388_00818 IPR018738 Protein of unknown function DUF2280 A388_00819 IPR035421 A388_00819 A388_00820 IPR025129 Domain of unknown function DUF4055 A388_00821 IPR006528 Phage head morphogenesis domain A388_00821 IPR017029 Putative phage head morphogenesis protein A388_00829 IPR025395 Protein of unknown function DUF4128 A388_00830 IPR014054 Bacteriophage regulatory protein, Rha family A388_00840 IPR008258 Lytic transglycosylase-like SLT domain A388_00840 IPR009302 Tail length tape measure A388_00840 IPR013491 Caudovirus, tape measure, N-terminal A388_00840 IPR023346 Lysozyme-like domain A388_00842 IPR014974 Domain of unknown function DUF1833 A388_00847 IPR002196 Glycoside hydrolase, family 24 A388_00847 IPR023346 Lysozyme-like domain A388_00852 IPR002104 Integrase, catalytic A388_00852 IPR010998 Integrase, Lambda-type, N-terminal A388_00852 IPR011010 DNA breaking-rejoining enzyme, catalytic core A388_00852 IPR013762 Integrase-like, catalytic core A388_00852 IPR025166 Domain of unknown function DUF4102 A388_00852 IPR038488 A388_00852 A388_00854 IPR002293 Amino acid/polyamine transporter I A388_00854 IPR004840 Amino acid permease, conserved site A388_00854 IPR004841 Amino acid permease/ SLC12A domain A388_00855 IPR007400 PrpF protein A388_00855 IPR012709 PrpF, AcnD-accessory A388_00856 IPR000092 Polyprenyl synthetase A388_00856 IPR008949 Terpenoid synthase A388_00856 IPR033749 A388_00856 A388_00857 IPR007351 Uncharacterised protein YjbR A388_00857 IPR038056 A388_00857 A388_00858 IPR001107 Band 7 protein A388_00858 IPR001972 Stomatin family A388_00858 IPR036013 A388_00858 A388_00859 IPR002810 NfeD-like, C-terminal domain A388_00860 IPR002641 Patatin/Phospholipase A2-related A388_00860 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase A388_00861 IPR002123 Phospholipid/glycerol acyltransferase A388_00862 IPR024371 Acetyl-coenzyme A transporter 1 A388_00862 IPR036259 A388_00862 A388_00863 IPR003684 Porin, alpha proteobacteria type A388_00864 IPR000917 Sulfatase A388_00864 IPR012549 Domain of unknown function DUF1705 A388_00864 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha A388_00864 IPR017850 Alkaline-phosphatase-like, core domain A388_00865 IPR001789 Signal transduction response regulator, receiver domain A388_00865 IPR001867 Signal transduction response regulator, C-terminal A388_00865 IPR011006 CheY-like superfamily A388_00865 IPR036388 A388_00865 A388_00866 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_00866 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain A388_00866 IPR004358 Signal transduction histidine kinase-related protein, C-terminal A388_00866 IPR036097 A388_00866 A388_00866 IPR036890 A388_00866 A388_00867 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase A388_00867 IPR036938 A388_00867 A388_00868 IPR018047 Ammonium transporter, conserved site A388_00868 IPR024041 Ammonium transporter AmtB-like domain A388_00868 IPR029020 Ammonium/urea transporter A388_00869 IPR000847 Transcription regulator HTH, LysR A388_00869 IPR005119 LysR, substrate-binding A388_00869 IPR036388 A388_00869 A388_00869 IPR036390 A388_00869 A388_00870 IPR004776 Auxin efflux carrier A388_00870 IPR038770 A388_00870 A388_00871 IPR036869 A388_00871 A388_00873 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site A388_00873 IPR002300 Aminoacyl-tRNA synthetase, class Ia A388_00873 IPR002303 Valine-tRNA ligase A388_00873 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain A388_00873 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding A388_00873 IPR010978 tRNA-binding arm A388_00873 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding A388_00873 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_00873 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm A388_00873 IPR037118 A388_00873 A388_00875 IPR002347 Glucose/ribitol dehydrogenase A388_00875 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_00875 IPR036291 A388_00875 A388_00876 IPR032710 A388_00876 A388_00876 IPR037401 A388_00876 A388_00877 IPR002765 Uncharacterised protein family UPF0145 A388_00877 IPR035439 A388_00877 A388_00878 IPR002765 Uncharacterised protein family UPF0145 A388_00878 IPR035439 A388_00878 A388_00879 IPR003423 Outer membrane efflux protein A388_00879 IPR010131 RND efflux system, outer membrane lipoprotein, NodT A388_00880 IPR001584 Integrase, catalytic core A388_00880 IPR012337 Ribonuclease H-like domain A388_00880 IPR025948 HTH-like domain A388_00880 IPR036397 A388_00880 A388_00881 IPR009057 Homeodomain-like A388_00881 IPR036388 A388_00881 A388_00882 IPR001036 Acriflavin resistance protein A388_00882 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 A388_00882 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains A388_00883 IPR006143 RND efflux pump, membrane fusion protein A388_00883 IPR032317 A388_00883 A388_00884 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase A388_00884 IPR036938 A388_00884 A388_00885 IPR011385 Site-specific recombinase Gcr A388_00886 IPR000092 Polyprenyl synthetase A388_00886 IPR008949 Terpenoid synthase A388_00886 IPR033749 A388_00886 A388_00887 IPR001787 Ribosomal protein L21 A388_00887 IPR018258 Ribosomal protein L21, conserved site A388_00887 IPR028909 Ribosomal protein L21-like A388_00887 IPR036164 A388_00887 A388_00888 IPR001684 Ribosomal protein L27 A388_00888 IPR018261 Ribosomal protein L27, conserved site A388_00889 IPR004564 Outer membrane lipoprotein carrier protein LolA-like A388_00889 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria A388_00889 IPR029046 Lipoprotein localisation LolA/LolB/LppX A388_00890 IPR021729 Domain of unknown function DUF3298 A388_00890 IPR037126 A388_00890 A388_00891 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain A388_00891 IPR002317 Serine-tRNA ligase, type1 A388_00891 IPR010978 tRNA-binding arm A388_00891 IPR015866 Serine-tRNA synthetase, type1, N-terminal A388_00892 IPR000878 Tetrapyrrole methylase A388_00892 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site A388_00892 IPR006366 Uroporphyrin-III C-methyltransferase A388_00892 IPR006367 Sirohaem synthase, N-terminal A388_00892 IPR012409 Sirohaem synthase A388_00892 IPR014776 Tetrapyrrole methylase, subdomain 2 A388_00892 IPR014777 Tetrapyrrole methylase, subdomain 1 A388_00892 IPR019478 Sirohaem synthase, dimerisation domain A388_00892 IPR035996 A388_00892 A388_00892 IPR036291 A388_00892 A388_00892 IPR037115 A388_00892 A388_00893 IPR001537 tRNA/rRNA methyltransferase, SpoU type A388_00893 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase A388_00893 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal A388_00893 IPR029028 Alpha/beta knot methyltransferases A388_00894 IPR002577 Helix-turn-helix, HxlR type A388_00894 IPR036388 A388_00894 A388_00894 IPR036390 A388_00894 A388_00895 IPR026816 Flavodoxin domain A388_00895 IPR029039 Flavoprotein-like A388_00896 IPR002293 Amino acid/polyamine transporter I A388_00896 IPR004841 Amino acid permease/ SLC12A domain A388_00897 IPR001670 Alcohol dehydrogenase, iron-type A388_00897 IPR018211 Alcohol dehydrogenase, iron-type, conserved site A388_00898 IPR036527 A388_00898 A388_00899 IPR000544 Octanoyltransferase A388_00899 IPR004143 Biotin/lipoate A/B protein ligase A388_00899 IPR020605 Octanoyltransferase, conserved site A388_00900 IPR007454 Uncharacterised protein family UPF0250 A388_00900 IPR027471 YbeD-like domain A388_00901 IPR000943 RNA polymerase sigma-70 A388_00901 IPR007127 RNA polymerase sigma factor 70, region 1.1 A388_00901 IPR007624 RNA polymerase sigma-70 region 3 A388_00901 IPR007627 RNA polymerase sigma-70 region 2 A388_00901 IPR007630 RNA polymerase sigma-70 region 4 A388_00901 IPR007631 RNA polymerase sigma factor 70, non-essential domain A388_00901 IPR009042 RNA polymerase sigma-70 region 1.2 A388_00901 IPR012760 RNA polymerase sigma factor RpoD, C-terminal A388_00901 IPR013324 RNA polymerase sigma factor, region 3/4 A388_00901 IPR013325 RNA polymerase sigma factor, region 2 A388_00901 IPR014284 RNA polymerase sigma-70 like domain A388_00901 IPR028630 RNA polymerase sigma factor RpoD A388_00901 IPR036388 A388_00901 A388_00903 IPR011978 Uncharacterised protein family UPF0149 A388_00903 IPR036255 A388_00903 A388_00904 IPR001763 Rhodanese-like domain A388_00904 IPR020936 Uncharacterised protein family UPF0176 A388_00904 IPR036873 A388_00904 A388_00905 IPR010710 Protein of unknown function DUF1289 A388_00906 IPR002020 Citrate synthase-like A388_00906 IPR010953 Citrate synthase, type I A388_00906 IPR016142 Citrate synthase-like, large alpha subdomain A388_00906 IPR016143 Citrate synthase-like, small alpha subdomain A388_00906 IPR019810 Citrate synthase active site A388_00906 IPR024176 Citrate synthase, bacterial-type A388_00906 IPR036969 A388_00906 A388_00907 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit A388_00907 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit A388_00907 IPR034804 A388_00907 A388_00908 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit A388_00908 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor A388_00908 IPR034804 A388_00908 A388_00909 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site A388_00909 IPR003953 FAD binding domain A388_00909 IPR011281 Succinate dehydrogenase, flavoprotein subunit A388_00909 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit A388_00909 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal A388_00909 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain A388_00909 IPR036188 A388_00909 A388_00909 IPR037099 A388_00909 A388_00910 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein A388_00910 IPR009051 Alpha-helical ferredoxin A388_00910 IPR012675 Beta-grasp domain A388_00910 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site A388_00910 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal A388_00910 IPR036010 A388_00910 A388_00911 IPR001017 Dehydrogenase, E1 component A388_00911 IPR005475 Transketolase-like, pyrimidine-binding domain A388_00911 IPR011603 2-oxoglutarate dehydrogenase E1 component A388_00911 IPR029061 Thiamin diphosphate-binding fold A388_00911 IPR031717 A388_00911 A388_00911 IPR032106 A388_00911 A388_00912 IPR000089 Biotin/lipoyl attachment A388_00912 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain A388_00912 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site A388_00912 IPR004167 E3 binding A388_00912 IPR006255 Dihydrolipoamide succinyltransferase A388_00912 IPR011053 Single hybrid motif A388_00912 IPR023213 Chloramphenicol acetyltransferase-like domain A388_00912 IPR036625 A388_00912 A388_00913 IPR001100 A388_00913 A388_00913 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A388_00913 IPR006258 Dihydrolipoamide dehydrogenase A388_00913 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site A388_00913 IPR016156 FAD/NAD-linked reductase, dimerisation domain A388_00913 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_00913 IPR036188 A388_00913 A388_00914 IPR005809 Succinyl-CoA synthetase, beta subunit A388_00914 IPR005811 ATP-citrate lyase/succinyl-CoA ligase A388_00914 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type A388_00914 IPR013815 ATP-grasp fold, subdomain 1 A388_00914 IPR016102 Succinyl-CoA synthetase-like A388_00914 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site A388_00915 IPR003781 CoA-binding A388_00915 IPR005810 Succinyl-CoA ligase, alpha subunit A388_00915 IPR005811 ATP-citrate lyase/succinyl-CoA ligase A388_00915 IPR016102 Succinyl-CoA synthetase-like A388_00915 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site A388_00915 IPR033847 A388_00915 A388_00915 IPR036291 A388_00915 A388_00918 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site A388_00918 IPR002305 Aminoacyl-tRNA synthetase, class Ic A388_00918 IPR002306 Tryptophan-tRNA ligase A388_00918 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_00919 IPR008526 Inner membrane protein YedI A388_00920 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative A388_00921 IPR006153 Cation/H+ exchanger A388_00921 IPR038770 A388_00921 A388_00922 IPR025668 Transposase DDE domain A388_00923 IPR013783 Immunoglobulin-like fold A388_00923 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass A388_00924 IPR008928 Six-hairpin glycosidase-like A388_00924 IPR012341 Six-hairpin glycosidase A388_00925 IPR019079 Capsule synthesis protein, CapA A388_00927 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding A388_00927 IPR036217 A388_00927 A388_00927 IPR036388 A388_00927 A388_00928 IPR006015 Universal stress protein A A388_00928 IPR006016 UspA A388_00928 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_00929 IPR001451 Bacterial transferase hexapeptide repeat A388_00929 IPR011004 Trimeric LpxA-like A388_00929 IPR018357 Hexapeptide transferase, conserved site A388_00930 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal A388_00930 IPR006359 Transcription elongation factor GreA A388_00930 IPR018151 Transcription elongation factor, GreA/GreB, conserved site A388_00930 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal A388_00930 IPR023459 Transcription elongation factor GreA/GreB family A388_00930 IPR028624 Transcription elongation factor GreA/GreB A388_00930 IPR036805 A388_00930 A388_00930 IPR036953 A388_00930 A388_00931 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain A388_00931 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain A388_00931 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain A388_00931 IPR006275 Carbamoyl-phosphate synthase, large subunit A388_00931 IPR011607 Methylglyoxal synthase-like domain A388_00931 IPR016185 Pre-ATP-grasp domain A388_00931 IPR036897 A388_00931 A388_00931 IPR036914 A388_00931 A388_00932 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain A388_00932 IPR006274 Carbamoyl-phosphate synthase, small subunit A388_00932 IPR017926 Glutamine amidotransferase A388_00932 IPR029062 Class I glutamine amidotransferase-like A388_00932 IPR036480 A388_00932 A388_00935 IPR001890 RNA-binding, CRM domain A388_00935 IPR017924 RNA-binding protein YhbY A388_00935 IPR035920 A388_00935 A388_00936 IPR002877 Ribosomal RNA methyltransferase FtsJ domain A388_00936 IPR015507 Ribosomal RNA large subunit methyltransferase E A388_00936 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_00937 IPR000642 Peptidase M41 A388_00937 IPR003593 AAA+ ATPase domain A388_00937 IPR003959 ATPase, AAA-type, core A388_00937 IPR003960 ATPase, AAA-type, conserved site A388_00937 IPR005936 Peptidase, FtsH A388_00937 IPR011546 Peptidase M41, FtsH extracellular A388_00937 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00937 IPR037219 A388_00937 A388_00938 IPR000489 Pterin-binding A388_00938 IPR006390 Dihydropteroate synthase A388_00938 IPR011005 Dihydropteroate synthase-like A388_00942 IPR008963 Purple acid phosphatase-like, N-terminal A388_00942 IPR018946 Alkaline phosphatase D-related A388_00942 IPR032093 A388_00942 A388_00945 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase A388_00945 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A388_00945 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A388_00945 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site A388_00945 IPR036291 A388_00945 A388_00946 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_00948 IPR005828 General substrate transporter A388_00948 IPR005829 Sugar transporter, conserved site A388_00948 IPR036259 A388_00948 A388_00949 IPR000577 A388_00949 A388_00949 IPR005999 Glycerol kinase A388_00949 IPR018483 Carbohydrate kinase, FGGY, conserved site A388_00949 IPR018484 Carbohydrate kinase, FGGY, N-terminal A388_00949 IPR018485 Carbohydrate kinase, FGGY, C-terminal A388_00950 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase A388_00950 IPR006076 FAD dependent oxidoreductase A388_00950 IPR031656 A388_00950 A388_00950 IPR036188 A388_00950 A388_00950 IPR038299 A388_00950 A388_00951 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising A388_00951 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal A388_00951 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal A388_00951 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site A388_00951 IPR035077 A388_00951 A388_00951 IPR035078 A388_00951 A388_00952 IPR001206 Diacylglycerol kinase, catalytic domain A388_00952 IPR016064 ATP-NAD kinase-like domain A388_00952 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 A388_00953 IPR004843 Calcineurin-like phosphoesterase domain, apaH type A388_00953 IPR029052 Metallo-dependent phosphatase-like A388_00954 IPR011049 Serralysin-like metalloprotease, C-terminal A388_00954 IPR013783 Immunoglobulin-like fold A388_00954 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass A388_00954 IPR022038 Bacterial Ig-like domain A388_00955 IPR011032 GroES (chaperonin 10)-like A388_00955 IPR018369 Chaperonin Cpn10, conserved site A388_00955 IPR020818 Chaperonin Cpn10 A388_00955 IPR037124 A388_00955 A388_00956 IPR001844 Chaperonin Cpn60 A388_00956 IPR002423 Chaperonin Cpn60/TCP-1 A388_00956 IPR018370 Chaperonin Cpn60, conserved site A388_00956 IPR027409 GroEL-like apical domain A388_00956 IPR027410 TCP-1-like chaperonin intermediate domain A388_00956 IPR027413 GroEL-like equatorial domain A388_00957 IPR000829 Diacylglycerol kinase, prokaryotic A388_00957 IPR036945 A388_00957 A388_00958 IPR001279 Beta-lactamase-like A388_00958 IPR036866 A388_00958 A388_00959 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain A388_00959 IPR030395 A388_00959 A388_00960 IPR001036 Acriflavin resistance protein A388_00960 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 A388_00960 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains A388_00961 IPR025187 Protein of unknown function DUF4112 A388_00962 IPR001915 Peptidase M48 A388_00962 IPR022919 Peptidase M48, protease HtpX, putative A388_00963 IPR008258 Lytic transglycosylase-like SLT domain A388_00963 IPR023346 Lysozyme-like domain A388_00964 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase A388_00964 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA A388_00964 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_00964 IPR035107 A388_00964 A388_00965 IPR003033 SCP2 sterol-binding domain A388_00965 IPR036527 A388_00965 A388_00966 IPR000189 Prokaryotic transglycosylase, active site A388_00966 IPR001638 Extracellular solute-binding protein, family 3 A388_00966 IPR008258 Lytic transglycosylase-like SLT domain A388_00966 IPR023346 Lysozyme-like domain A388_00967 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal A388_00967 IPR006358 Transcription elongation factor GreB A388_00967 IPR018151 Transcription elongation factor, GreA/GreB, conserved site A388_00967 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal A388_00967 IPR023459 Transcription elongation factor GreA/GreB family A388_00967 IPR028624 Transcription elongation factor GreA/GreB A388_00967 IPR036805 A388_00967 A388_00967 IPR036953 A388_00967 A388_00969 IPR011944 Steroid delta5-4-isomerase A388_00969 IPR027843 Domain of unknown function DUF4440 A388_00969 IPR032710 A388_00969 A388_00970 IPR000873 AMP-dependent synthetase/ligase A388_00970 IPR009081 Acyl carrier protein-like A388_00970 IPR010071 Amino acid adenylation domain A388_00970 IPR011004 Trimeric LpxA-like A388_00970 IPR012728 Non-ribosomal peptide synthetase C-terminal A388_00970 IPR020845 AMP-binding, conserved site A388_00970 IPR025110 AMP-binding enzyme C-terminal domain A388_00970 IPR036736 A388_00970 A388_00973 IPR001584 Integrase, catalytic core A388_00973 IPR012337 Ribonuclease H-like domain A388_00973 IPR036397 A388_00973 A388_00974 IPR002514 Transposase IS3/IS911family A388_00974 IPR009057 Homeodomain-like A388_00978 IPR001647 DNA-binding HTH domain, TetR-type A388_00978 IPR009057 Homeodomain-like A388_00979 IPR000415 Nitroreductase-like A388_00979 IPR029479 Nitroreductase A388_00980 IPR002347 Glucose/ribitol dehydrogenase A388_00980 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_00980 IPR036291 A388_00980 A388_00981 IPR001647 DNA-binding HTH domain, TetR-type A388_00981 IPR009057 Homeodomain-like A388_00981 IPR036271 A388_00981 A388_00982 IPR004381 Glycerate kinase A388_00982 IPR018193 Glycerate kinase, flavodoxin-like domain A388_00982 IPR018197 Glycerate kinase, restriction-enzyme-like fold A388_00982 IPR036129 A388_00982 A388_00983 IPR006656 Molybdopterin oxidoreductase A388_00983 IPR006657 Molydopterin dinucleotide-binding domain A388_00983 IPR009010 Aspartate decarboxylase-like domain A388_00983 IPR010046 Oxidoreductase alpha (molybdopterin) subunit A388_00984 IPR003786 Protein FdhD A388_00984 IPR016193 Cytidine deaminase-like A388_00985 IPR010652 Protein of unknown function DUF1232 A388_00986 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A388_00986 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain A388_00986 IPR020921 Erythronate-4-phosphate dehydrogenase A388_00986 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain A388_00986 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 A388_00986 IPR036291 A388_00986 A388_00986 IPR038251 A388_00986 A388_00987 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) A388_00987 IPR004525 Elongation factor P--(R)-beta-lysine ligase A388_00987 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal A388_00988 IPR007379 Tim44-like domain A388_00988 IPR032710 A388_00988 A388_00989 IPR003593 AAA+ ATPase domain A388_00989 IPR004504 DNA repair protein RadA A388_00989 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup A388_00989 IPR014774 Circadian clock protein KaiC/DNA repair protein RadA A388_00989 IPR020568 Ribosomal protein S5 domain 2-type fold A388_00989 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_00990 IPR002293 Amino acid/polyamine transporter I A388_00990 IPR004840 Amino acid permease, conserved site A388_00990 IPR004841 Amino acid permease/ SLC12A domain A388_00992 IPR000183 Ornithine/DAP/Arg decarboxylase A388_00992 IPR002986 Diaminopimelate decarboxylase, LysA A388_00992 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal A388_00992 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal A388_00992 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal A388_00992 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site A388_00992 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site A388_00992 IPR029066 PLP-binding barrel A388_00993 IPR001653 Diaminopimelate epimerase, DapF A388_00993 IPR018510 Diaminopimelate epimerase, active site A388_00994 IPR000073 Alpha/beta hydrolase fold-1 A388_00994 IPR029058 Alpha/Beta hydrolase fold A388_00995 IPR001123 Lysine-type exporter protein (LYSE/YGGA) A388_00996 IPR002104 Integrase, catalytic A388_00996 IPR004107 Integrase, SAM-like, N-terminal A388_00996 IPR010998 Integrase, Lambda-type, N-terminal A388_00996 IPR011010 DNA breaking-rejoining enzyme, catalytic core A388_00996 IPR013762 Integrase-like, catalytic core A388_00996 IPR023009 Tyrosine recombinase XerC/XerD A388_00997 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site A388_00997 IPR012255 Electron transfer flavoprotein, beta subunit A388_00997 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_00997 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal A388_00998 IPR001308 Electron transfer flavoprotein, alpha subunit A388_00998 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_00998 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal A388_00998 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal A388_00998 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site A388_00998 IPR029035 DHS-like NAD/FAD-binding domain A388_00999 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal A388_00999 IPR005743 DNA gyrase, subunit A A388_00999 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel A388_00999 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain A388_00999 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta A388_00999 IPR013760 DNA topoisomerase, type IIA-like domain A388_00999 IPR035516 A388_00999 A388_01000 IPR038731 A388_01000 A388_01001 IPR007267 GtrA-like protein A388_01002 IPR001173 Glycosyltransferase 2-like A388_01002 IPR029044 Nucleotide-diphospho-sugar transferases A388_01003 IPR006879 Uncharacterised protein family UPF0249/HpnK A388_01003 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel A388_01006 IPR032317 A388_01006 A388_01007 IPR003423 Outer membrane efflux protein A388_01008 IPR000192 Aminotransferase class V domain A388_01008 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_01008 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_01008 IPR015424 Pyridoxal phosphate-dependent transferase A388_01008 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site A388_01008 IPR022278 Phosphoserine aminotransferase A388_01011 IPR003791 Protein of unknown function UPF0178 A388_01012 IPR000620 Drug/metabolite transporter A388_01013 IPR003838 Permease FtsX-like A388_01013 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family A388_01013 IPR025857 MacB-like periplasmic core domain A388_01014 IPR003439 ABC transporter-like A388_01014 IPR003593 AAA+ ATPase domain A388_01014 IPR011924 Lipoprotein releasing system, ATP-binding protein A388_01014 IPR017871 ABC transporter, conserved site A388_01014 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01015 IPR001279 Beta-lactamase-like A388_01015 IPR004477 ComEC/Rec2-related protein A388_01015 IPR004797 Competence protein ComEC/Rec2 A388_01015 IPR025405 Domain of unknown function DUF4131 A388_01015 IPR036866 A388_01015 A388_01016 IPR004960 Bacterial lipid A biosynthesis acyltransferase A388_01017 IPR002142 Peptidase S49 A388_01017 IPR004635 Peptidase S49, SppA A388_01017 IPR029045 ClpP/crotonase-like domain A388_01018 IPR000073 Alpha/beta hydrolase fold-1 A388_01018 IPR029058 Alpha/Beta hydrolase fold A388_01019 IPR002376 Formyl transferase, N-terminal A388_01019 IPR004607 Phosphoribosylglycinamide formyltransferase A388_01019 IPR036477 A388_01019 A388_01020 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase A388_01020 IPR010918 AIR synthase-related protein, C-terminal domain A388_01020 IPR016188 PurM, N-terminal-like A388_01020 IPR036676 A388_01020 A388_01020 IPR036921 A388_01020 A388_01021 IPR002549 Uncharacterised protein family UPF0118 A388_01022 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) A388_01022 IPR017788 DnaA regulatory inactivator Hda A388_01022 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01023 IPR011050 Pectin lyase fold/virulence factor A388_01023 IPR026454 Rhombotarget A A388_01023 IPR026457 CSLREA domain A388_01024 IPR011050 Pectin lyase fold/virulence factor A388_01024 IPR026457 CSLREA domain A388_01025 IPR021455 Protein of unknown function DUF3106 A388_01027 IPR007627 RNA polymerase sigma-70 region 2 A388_01027 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 A388_01027 IPR013324 RNA polymerase sigma factor, region 3/4 A388_01027 IPR013325 RNA polymerase sigma factor, region 2 A388_01027 IPR014284 RNA polymerase sigma-70 like domain A388_01027 IPR036388 A388_01027 A388_01028 IPR001537 tRNA/rRNA methyltransferase, SpoU type A388_01028 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal A388_01028 IPR029028 Alpha/beta knot methyltransferases A388_01028 IPR029064 50S ribosomal protein L30e-like A388_01029 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase A388_01029 IPR028343 Fructose-1,6-bisphosphatase A388_01029 IPR033391 A388_01029 A388_01031 IPR006664 Outer membrane protein, bacterial A388_01031 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal A388_01031 IPR006690 Outer membrane protein, OmpA-like, conserved site A388_01031 IPR014169 Peptidoglycan-associated lipoprotein A388_01031 IPR036737 A388_01031 A388_01031 IPR039001 A388_01031 A388_01032 IPR007195 TolB, N-terminal A388_01032 IPR011042 Six-bladed beta-propeller, TolB-like A388_01032 IPR011659 WD40-like Beta Propeller A388_01032 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB A388_01032 IPR036752 A388_01032 A388_01033 IPR006260 TonB, C-terminal A388_01033 IPR014161 Tol-Pal system, TolA A388_01034 IPR003400 Biopolymer transport protein ExbD/TolR A388_01034 IPR014168 Biopolymer transport, TolR A388_01035 IPR002898 MotA/TolQ/ExbB proton channel A388_01035 IPR014163 Tol-Pal system, TolQ A388_01036 IPR006683 Thioesterase superfamily A388_01036 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family A388_01036 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase A388_01036 IPR029069 HotDog domain A388_01037 IPR002933 Peptidase M20 A388_01037 IPR011650 Peptidase M20, dimerisation domain A388_01037 IPR017439 Amidohydrolase A388_01037 IPR036264 A388_01037 A388_01038 IPR003593 AAA+ ATPase domain A388_01038 IPR004605 DNA helicase, Holliday junction RuvB type A388_01038 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal A388_01038 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal A388_01038 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01038 IPR036388 A388_01038 A388_01038 IPR036390 A388_01038 A388_01039 IPR000085 Bacterial DNA recombination protein RuvA A388_01039 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 A388_01039 IPR010994 RuvA domain 2-like A388_01039 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal A388_01039 IPR012340 Nucleic acid-binding, OB-fold A388_01039 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial A388_01039 IPR036267 A388_01039 A388_01040 IPR003607 HD/PDEase domain A388_01040 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase A388_01040 IPR006674 HD domain A388_01040 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain A388_01040 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain A388_01041 IPR010073 Phosphoribosylformylglycinamidine synthase A388_01041 IPR010918 AIR synthase-related protein, C-terminal domain A388_01041 IPR029062 Class I glutamine amidotransferase-like A388_01041 IPR036604 A388_01041 A388_01041 IPR036676 A388_01041 A388_01041 IPR036921 A388_01041 A388_01042 IPR004812 Drug resistance transporter Bcr/CmlA subfamily A388_01042 IPR005829 Sugar transporter, conserved site A388_01042 IPR011701 Major facilitator superfamily A388_01042 IPR036259 A388_01042 A388_01043 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal A388_01043 IPR036069 A388_01043 A388_01044 IPR001753 Crotonase superfamily A388_01044 IPR014748 Crontonase, C-terminal A388_01044 IPR029045 ClpP/crotonase-like domain A388_01045 IPR004821 Cytidyltransferase-like domain A388_01045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_01046 IPR014044 CAP domain A388_01046 IPR035940 A388_01046 A388_01047 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant A388_01047 IPR024706 Peroxiredoxin, AhpC-type A388_01047 IPR036249 A388_01047 A388_01048 IPR002761 DUF71 domain A388_01048 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_01050 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_01050 IPR018317 Queuosine biosynthesis protein QueC A388_01051 IPR007197 Radical SAM A388_01051 IPR013785 Aldolase-type TIM barrel A388_01051 IPR024924 7-carboxy-7-deazaguanine synthase-like A388_01051 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE A388_01052 IPR001451 Bacterial transferase hexapeptide repeat A388_01052 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family A388_01052 IPR011004 Trimeric LpxA-like A388_01052 IPR018357 Hexapeptide transferase, conserved site A388_01052 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 A388_01052 IPR037133 A388_01052 A388_01053 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel A388_01054 IPR000847 Transcription regulator HTH, LysR A388_01054 IPR005119 LysR, substrate-binding A388_01054 IPR036388 A388_01054 A388_01054 IPR036390 A388_01054 A388_01055 IPR003439 ABC transporter-like A388_01055 IPR003593 AAA+ ATPase domain A388_01055 IPR005666 Sulphate transport system permease protein 1 A388_01055 IPR008995 Molybdate/tungstate binding, C-terminal A388_01055 IPR017871 ABC transporter, conserved site A388_01055 IPR024765 TOBE-like domain A388_01055 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01056 IPR000515 MetI-like domain A388_01056 IPR005667 Sulphate ABC transporter permease protein 2 A388_01056 IPR011866 Sulphate ABC transporter, permease protein CysW A388_01056 IPR035906 A388_01056 A388_01057 IPR000515 MetI-like domain A388_01057 IPR005667 Sulphate ABC transporter permease protein 2 A388_01057 IPR011865 Sulphate ABC transporter, permease protein CysT A388_01057 IPR035906 A388_01057 A388_01058 IPR010662 Putative hydrolase RBBP9/YdeN A388_01058 IPR029058 Alpha/Beta hydrolase fold A388_01059 IPR005669 Thiosulphate/Sulfate-binding protein A388_01059 IPR034408 A388_01059 A388_01060 IPR001544 Aminotransferase, class IV A388_01060 IPR017824 Aminodeoxychorismate lyase, class IV A388_01060 IPR036038 A388_01060 A388_01061 IPR003770 Uncharacterised protein family UPF0755, YceG-like A388_01062 IPR018094 Thymidylate kinase A388_01062 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01062 IPR039430 A388_01062 A388_01063 IPR006683 Thioesterase superfamily A388_01063 IPR029069 HotDog domain A388_01064 IPR003953 FAD binding domain A388_01064 IPR005288 L-aspartate oxidase A388_01064 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal A388_01064 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain A388_01064 IPR036188 A388_01064 A388_01064 IPR037099 A388_01064 A388_01065 IPR001478 PDZ domain A388_01065 IPR001940 Peptidase S1C A388_01065 IPR009003 Trypsin-like cysteine/serine peptidase domain A388_01065 IPR011782 Peptidase S1C, Do A388_01065 IPR036034 A388_01065 A388_01066 IPR029069 HotDog domain A388_01067 IPR000640 Translation elongation factor EFG, V domain A388_01067 IPR000795 Elongation factor, GTP-binding domain A388_01067 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 A388_01067 IPR005225 Small GTP-binding protein domain A388_01067 IPR006297 Elongation factor 4 A388_01067 IPR013842 GTP-binding protein LepA, C-terminal A388_01067 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01067 IPR031157 A388_01067 A388_01067 IPR035647 A388_01067 A388_01067 IPR038363 A388_01067 A388_01068 IPR000223 Peptidase S26A, signal peptidase I A388_01068 IPR015927 Peptidase S24/S26A/S26B/S26C A388_01068 IPR019533 Peptidase S26 A388_01068 IPR019756 Peptidase S26A, signal peptidase I, serine active site A388_01068 IPR019757 Peptidase S26A, signal peptidase I, lysine active site A388_01068 IPR036286 A388_01068 A388_01069 IPR032314 A388_01069 A388_01070 IPR000999 Ribonuclease III domain A388_01070 IPR011907 Ribonuclease III A388_01070 IPR014720 Double-stranded RNA-binding domain A388_01070 IPR036389 A388_01070 A388_01071 IPR004044 K Homology domain, type 2 A388_01071 IPR005225 Small GTP-binding protein domain A388_01071 IPR005662 GTP-binding protein Era A388_01071 IPR006073 GTP binding domain A388_01071 IPR009019 K homology domain, prokaryotic type A388_01071 IPR015946 K homology domain-like, alpha/beta A388_01071 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01073 IPR003717 Recombination protein O, RecO A388_01073 IPR012340 Nucleic acid-binding, OB-fold A388_01073 IPR022572 DNA replication/recombination mediator RecO, N-terminal A388_01074 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ A388_01074 IPR013785 Aldolase-type TIM barrel A388_01074 IPR036130 A388_01074 A388_01075 IPR009078 Ferritin-like superfamily A388_01075 IPR010386 tRNA-hydroxylase MiaE A388_01075 IPR012347 Ferritin-related A388_01076 IPR002347 Glucose/ribitol dehydrogenase A388_01076 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_01076 IPR036291 A388_01076 A388_01079 IPR003736 Phenylacetic acid degradation-related domain A388_01079 IPR006683 Thioesterase superfamily A388_01079 IPR029069 HotDog domain A388_01080 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V A388_01080 IPR011057 Mss4-like A388_01081 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site A388_01081 IPR004839 Aminotransferase, class I/classII A388_01081 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_01081 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_01081 IPR015424 Pyridoxal phosphate-dependent transferase A388_01083 IPR000014 PAS domain A388_01083 IPR000160 GGDEF domain A388_01083 IPR029787 Nucleotide cyclase A388_01083 IPR035965 A388_01083 A388_01085 IPR001650 Helicase, C-terminal A388_01085 IPR001943 UVR domain A388_01085 IPR004807 UvrABC system, subunit B A388_01085 IPR006935 Helicase/UvrB domain A388_01085 IPR014001 Helicase, superfamily 1/2, ATP-binding domain A388_01085 IPR024759 UvrB, YAD/RRR-motif-containing domain A388_01085 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01085 IPR036876 A388_01085 A388_01086 IPR000566 Lipocalin/cytosolic fatty-acid binding domain A388_01086 IPR002446 Lipocalin, bacterial A388_01086 IPR012674 Calycin A388_01086 IPR022271 Lipocalin, ApoD type A388_01086 IPR022272 Lipocalin family conserved site A388_01087 IPR000620 Drug/metabolite transporter A388_01087 IPR004626 RarD protein A388_01088 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I A388_01088 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain A388_01088 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain A388_01088 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site A388_01088 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family A388_01088 IPR036291 A388_01088 A388_01091 IPR006073 GTP binding domain A388_01091 IPR006074 GTP1/OBG, conserved site A388_01091 IPR006169 GTP1/OBG domain A388_01091 IPR014100 GTP-binding protein Obg/CgtA A388_01091 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01091 IPR035101 A388_01091 A388_01091 IPR036726 A388_01091 A388_01092 IPR001048 Aspartate/glutamate/uridylate kinase A388_01092 IPR001057 Glutamate/acetylglutamate kinase A388_01092 IPR002478 PUA domain A388_01092 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase A388_01092 IPR011529 Glutamate 5-kinase A388_01092 IPR015947 PUA-like domain A388_01092 IPR019797 Glutamate 5-kinase, conserved site A388_01092 IPR036393 A388_01092 A388_01092 IPR036974 A388_01092 A388_01093 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial A388_01093 IPR023214 HAD-like domain A388_01093 IPR036412 A388_01093 A388_01094 IPR011673 Protein of unknown function DUF1615 A388_01095 IPR001269 tRNA-dihydrouridine synthase A388_01095 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 A388_01095 IPR013785 Aldolase-type TIM barrel A388_01095 IPR018517 tRNA-dihydrouridine synthase, conserved site A388_01095 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal A388_01095 IPR032887 A388_01095 A388_01096 IPR004136 2-nitropropane dioxygenase, NPD A388_01096 IPR013785 Aldolase-type TIM barrel A388_01097 IPR008217 Domain of unknown function DUF125, transmembrane A388_01098 IPR011990 Tetratricopeptide-like helical domain A388_01099 IPR003331 UDP-N-acetylglucosamine 2-epimerase A388_01099 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type A388_01102 IPR029044 Nucleotide-diphospho-sugar transferases A388_01105 IPR002081 Cryptochrome/DNA photolyase, class 1 A388_01105 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal A388_01105 IPR006050 DNA photolyase, N-terminal A388_01105 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_01105 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal A388_01105 IPR036134 A388_01105 A388_01105 IPR036155 A388_01105 A388_01106 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain A388_01107 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_01107 IPR036188 A388_01107 A388_01108 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal A388_01108 IPR012338 Beta-lactamase/transpeptidase-like A388_01108 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A A388_01109 IPR007963 Peptidase M61, catalytic domain A388_01109 IPR024191 Peptidase M61 A388_01109 IPR036034 A388_01109 A388_01110 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric A388_01111 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F A388_01111 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F A388_01111 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site A388_01111 IPR020103 Pseudouridine synthase, catalytic domain A388_01112 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic A388_01112 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site A388_01112 IPR024084 Isopropylmalate dehydrogenase-like domain A388_01116 IPR010645 Domain of unknown function DUF1228 A388_01116 IPR036259 A388_01116 A388_01117 IPR000847 Transcription regulator HTH, LysR A388_01117 IPR005119 LysR, substrate-binding A388_01117 IPR036388 A388_01117 A388_01117 IPR036390 A388_01117 A388_01118 IPR001991 Sodium:dicarboxylate symporter A388_01118 IPR036458 A388_01118 A388_01119 IPR003719 Phenazine biosynthesis PhzF protein A388_01120 IPR001431 Peptidase M16, zinc-binding site A388_01120 IPR007863 Peptidase M16, C-terminal domain A388_01120 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like A388_01120 IPR011765 Peptidase M16, N-terminal A388_01121 IPR021490 Protein of unknown function DUF3144 A388_01123 IPR007899 CHAD A388_01123 IPR023577 CYTH-like domain A388_01123 IPR033469 A388_01123 A388_01123 IPR038186 A388_01123 A388_01124 IPR009305 Protein of unknown function DUF962 A388_01125 IPR002729 CRISPR-associated protein Cas1 A388_01125 IPR019857 CRISPR-associated protein Cas1, YPEST subtype A388_01126 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type A388_01126 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01126 IPR038257 A388_01126 A388_01127 IPR013397 CRISPR-associated protein Csy1 A388_01128 IPR013398 CRISPR-associated protein Csy2 A388_01129 IPR013399 CRISPR-associated protein Csy3 A388_01130 IPR013396 CRISPR-associated protein Csy4 A388_01131 IPR013785 Aldolase-type TIM barrel A388_01131 IPR022998 Thiamin phosphate synthase superfamily A388_01131 IPR034291 A388_01131 A388_01131 IPR036206 A388_01131 A388_01132 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase A388_01132 IPR005814 Aminotransferase class-III A388_01132 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_01132 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_01132 IPR015424 Pyridoxal phosphate-dependent transferase A388_01133 IPR036736 A388_01133 A388_01134 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F A388_01134 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site A388_01134 IPR020103 Pseudouridine synthase, catalytic domain A388_01135 IPR000330 SNF2-related A388_01135 IPR001650 Helicase, C-terminal A388_01135 IPR014001 Helicase, superfamily 1/2, ATP-binding domain A388_01135 IPR022737 RNA polymerase recycling, bacterial, C-terminal A388_01135 IPR023949 RNA polymerase-associated protein RapA A388_01135 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01135 IPR038718 A388_01135 A388_01136 IPR002549 Uncharacterised protein family UPF0118 A388_01137 IPR001647 DNA-binding HTH domain, TetR-type A388_01137 IPR009057 Homeodomain-like A388_01138 IPR001433 Oxidoreductase FAD/NAD(P)-binding A388_01138 IPR001834 NADH:cytochrome b5 reductase (CBR) A388_01138 IPR008333 Oxidoreductase, FAD-binding domain A388_01138 IPR012675 Beta-grasp domain A388_01138 IPR017938 Riboflavin synthase-like beta-barrel A388_01138 IPR036010 A388_01138 A388_01138 IPR039261 A388_01138 A388_01139 IPR005804 Fatty acid desaturase, type 1 A388_01140 IPR027961 Protein of unknown function DUF4442 A388_01140 IPR029069 HotDog domain A388_01141 IPR001647 DNA-binding HTH domain, TetR-type A388_01141 IPR009057 Homeodomain-like A388_01141 IPR023772 DNA-binding HTH domain, TetR-type, conserved site A388_01141 IPR036271 A388_01141 A388_01142 IPR007497 Protein of unknown function DUF541 A388_01143 IPR004637 2,4-diaminobutyrate 4-transaminase A388_01143 IPR005814 Aminotransferase class-III A388_01143 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_01143 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_01143 IPR015424 Pyridoxal phosphate-dependent transferase A388_01144 IPR002129 Pyridoxal phosphate-dependent decarboxylase A388_01144 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_01144 IPR015424 Pyridoxal phosphate-dependent transferase A388_01144 IPR021115 Pyridoxal-phosphate binding site A388_01145 IPR015590 Aldehyde dehydrogenase domain A388_01145 IPR016160 Aldehyde dehydrogenase, cysteine active site A388_01145 IPR016161 Aldehyde/histidinol dehydrogenase A388_01145 IPR016162 Aldehyde dehydrogenase, N-terminal A388_01145 IPR016163 Aldehyde dehydrogenase, C-terminal A388_01145 IPR029510 Aldehyde dehydrogenase, glutamic acid active site A388_01146 IPR000485 AsnC-type HTH domain A388_01146 IPR011008 Dimeric alpha-beta barrel A388_01146 IPR019887 Transcription regulator AsnC-type, C-terminal A388_01146 IPR019888 Transcription regulator AsnC-type A388_01146 IPR036388 A388_01146 A388_01146 IPR036390 A388_01146 A388_01147 IPR000399 TPP-binding enzyme, conserved site A388_01147 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding A388_01147 IPR012000 Thiamine pyrophosphate enzyme, central domain A388_01147 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain A388_01147 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme A388_01147 IPR029035 DHS-like NAD/FAD-binding domain A388_01147 IPR029061 Thiamin diphosphate-binding fold A388_01148 IPR002293 Amino acid/polyamine transporter I A388_01148 IPR004840 Amino acid permease, conserved site A388_01148 IPR004841 Amino acid permease/ SLC12A domain A388_01149 IPR024370 PBP domain A388_01150 IPR000515 MetI-like domain A388_01150 IPR011864 Phosphate ABC transporter, permease protein PstC A388_01150 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain A388_01150 IPR035906 A388_01150 A388_01151 IPR000515 MetI-like domain A388_01151 IPR005672 Phosphate transport system permease protein PstA A388_01151 IPR024573 Domain of unknown function DUF3333 A388_01151 IPR035906 A388_01151 A388_01152 IPR003439 ABC transporter-like A388_01152 IPR003593 AAA+ ATPase domain A388_01152 IPR005670 Phosphate transport system permease protein 1 A388_01152 IPR017871 ABC transporter, conserved site A388_01152 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01153 IPR002142 Peptidase S49 A388_01153 IPR013703 Peptidase S49, N-terminal proteobacteria A388_01153 IPR029045 ClpP/crotonase-like domain A388_01154 IPR013783 Immunoglobulin-like fold A388_01155 IPR014509 Uncharacterised conserved protein UCP020606 A388_01156 IPR000362 Fumarate lyase family A388_01156 IPR004769 Adenylosuccinate lyase A388_01156 IPR008948 L-Aspartase-like A388_01156 IPR013539 Adenylosuccinate lyase PurB, C-terminal A388_01156 IPR020557 Fumarate lyase, conserved site A388_01156 IPR022761 Fumarate lyase, N-terminal A388_01156 IPR024083 Fumarase/histidase, N-terminal A388_01157 IPR007451 Uncharacterised protein family UPF0274 A388_01157 IPR035932 A388_01157 A388_01158 IPR004506 tRNA-specific 2-thiouridylase A388_01158 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_01158 IPR023382 Adenine nucleotide alpha hydrolase-like domains A388_01159 IPR000086 NUDIX hydrolase domain A388_01159 IPR015797 NUDIX hydrolase domain-like A388_01159 IPR020084 NUDIX hydrolase, conserved site A388_01160 IPR001451 Bacterial transferase hexapeptide repeat A388_01160 IPR011004 Trimeric LpxA-like A388_01161 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal A388_01161 IPR012338 Beta-lactamase/transpeptidase-like A388_01161 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal A388_01161 IPR015956 Penicillin-binding protein-associated A388_01161 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A A388_01161 IPR037167 A388_01161 A388_01164 IPR002828 Survival protein SurE-like phosphatase/nucleotidase A388_01164 IPR030048 A388_01164 A388_01164 IPR036523 A388_01164 A388_01165 IPR011055 Duplicated hybrid motif A388_01165 IPR016047 Peptidase M23 A388_01165 IPR018392 LysM domain A388_01165 IPR036779 A388_01165 A388_01166 IPR000847 Transcription regulator HTH, LysR A388_01166 IPR005119 LysR, substrate-binding A388_01166 IPR036388 A388_01166 A388_01166 IPR036390 A388_01166 A388_01167 IPR008269 Peptidase S16, Lon C-terminal A388_01167 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup A388_01167 IPR020568 Ribosomal protein S5 domain 2-type fold A388_01167 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01168 IPR011701 Major facilitator superfamily A388_01168 IPR036259 A388_01168 A388_01169 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain A388_01169 IPR004361 Glyoxalase I A388_01169 IPR018146 Glyoxalase I, conserved site A388_01169 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase A388_01170 IPR016833 Putative sodium bile acid cotransporter A388_01170 IPR038770 A388_01170 A388_01171 IPR002150 Ribosomal protein L31 A388_01171 IPR027491 Ribosomal protein L31 type A A388_01171 IPR034704 A388_01171 A388_01172 IPR001633 EAL domain A388_01172 IPR035919 A388_01172 A388_01172 IPR035965 A388_01172 A388_01174 IPR003739 Lysine-2,3-aminomutase family A388_01174 IPR007197 Radical SAM A388_01174 IPR013785 Aldolase-type TIM barrel A388_01174 IPR022462 Lysine-2,3-aminomutase-like A388_01175 IPR001059 Translation elongation factor P/YeiP, central A388_01175 IPR008991 Translation protein SH3-like domain A388_01175 IPR011768 Translation elongation factor P A388_01175 IPR012340 Nucleic acid-binding, OB-fold A388_01175 IPR013185 Translation elongation factor, KOW-like A388_01175 IPR014722 Ribosomal protein L2 domain 2 A388_01175 IPR015365 Elongation factor P, C-terminal A388_01175 IPR020599 Translation elongation factor P/YeiP A388_01176 IPR003706 Carbon starvation protein CstA A388_01176 IPR025299 CstA C-terminal domain A388_01177 IPR007423 Protein of unknown function DUF466 A388_01179 IPR000847 Transcription regulator HTH, LysR A388_01179 IPR005119 LysR, substrate-binding A388_01179 IPR036388 A388_01179 A388_01179 IPR036390 A388_01179 A388_01180 IPR000587 Creatinase, N-terminal A388_01180 IPR000994 Peptidase M24, structural domain A388_01180 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal A388_01180 IPR036005 A388_01180 A388_01181 IPR000060 BCCT transporter family A388_01182 IPR000060 BCCT transporter family A388_01183 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit A388_01183 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain A388_01183 IPR017941 Rieske [2Fe-2S] iron-sulphur domain A388_01183 IPR036922 A388_01183 A388_01184 IPR015590 Aldehyde dehydrogenase domain A388_01184 IPR016160 Aldehyde dehydrogenase, cysteine active site A388_01184 IPR016161 Aldehyde/histidinol dehydrogenase A388_01184 IPR016162 Aldehyde dehydrogenase, N-terminal A388_01184 IPR016163 Aldehyde dehydrogenase, C-terminal A388_01184 IPR029510 Aldehyde dehydrogenase, glutamic acid active site A388_01185 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_01185 IPR024935 Rubredoxin domain A388_01185 IPR036188 A388_01185 A388_01186 IPR006076 FAD dependent oxidoreductase A388_01186 IPR036188 A388_01186 A388_01187 IPR010424 Ethanolamine utilisation EutQ A388_01187 IPR011051 RmlC-like cupin domain A388_01187 IPR014710 RmlC-like jelly roll fold A388_01189 IPR002771 Multiple antibiotic resistance (MarC)-related A388_01190 IPR000620 Drug/metabolite transporter A388_01191 IPR000620 Drug/metabolite transporter A388_01192 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM A388_01192 IPR036165 A388_01192 A388_01193 IPR001647 DNA-binding HTH domain, TetR-type A388_01193 IPR009057 Homeodomain-like A388_01196 IPR025668 Transposase DDE domain A388_01197 IPR001647 DNA-binding HTH domain, TetR-type A388_01197 IPR009057 Homeodomain-like A388_01198 IPR003829 Pirin, N-terminal domain A388_01198 IPR011051 RmlC-like cupin domain A388_01198 IPR012093 Pirin A388_01198 IPR014710 RmlC-like jelly roll fold A388_01199 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site A388_01199 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme A388_01199 IPR036052 A388_01199 A388_01200 IPR013559 YheO-like A388_01200 IPR039445 A388_01200 A388_01201 IPR007037 Siderophore-interacting protein A388_01201 IPR013113 FAD-binding 9, siderophore-interacting A388_01201 IPR017938 Riboflavin synthase-like beta-barrel A388_01201 IPR039261 A388_01201 A388_01202 IPR000873 AMP-dependent synthetase/ligase A388_01202 IPR020845 AMP-binding, conserved site A388_01202 IPR025110 AMP-binding enzyme C-terminal domain A388_01203 IPR001242 Condensation domain A388_01203 IPR006162 Phosphopantetheine attachment site A388_01203 IPR009081 Acyl carrier protein-like A388_01203 IPR023213 Chloramphenicol acetyltransferase-like domain A388_01203 IPR029058 Alpha/Beta hydrolase fold A388_01203 IPR036736 A388_01203 A388_01206 IPR000522 ABC transporter, permease protein A388_01206 IPR037294 A388_01206 A388_01207 IPR000522 ABC transporter, permease protein A388_01207 IPR037294 A388_01207 A388_01208 IPR003439 ABC transporter-like A388_01208 IPR003593 AAA+ ATPase domain A388_01208 IPR017871 ABC transporter, conserved site A388_01208 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01209 IPR002491 ABC transporter periplasmic binding domain A388_01210 IPR010105 TonB-dependent siderophore receptor A388_01210 IPR010917 TonB-dependent receptor, conserved site A388_01210 IPR012910 TonB-dependent receptor, plug A388_01210 IPR036942 A388_01210 A388_01210 IPR037066 A388_01210 A388_01211 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase A388_01211 IPR031043 A388_01211 A388_01211 IPR036188 A388_01211 A388_01212 IPR001242 Condensation domain A388_01212 IPR023213 Chloramphenicol acetyltransferase-like domain A388_01213 IPR000873 AMP-dependent synthetase/ligase A388_01213 IPR011963 2,3-dihydroxybenzoate-AMP ligase A388_01213 IPR020845 AMP-binding, conserved site A388_01213 IPR025110 AMP-binding enzyme C-terminal domain A388_01214 IPR000868 Isochorismatase-like A388_01214 IPR009081 Acyl carrier protein-like A388_01214 IPR016291 Isochorismatase A388_01214 IPR036380 A388_01214 A388_01214 IPR036736 A388_01214 A388_01215 IPR002129 Pyridoxal phosphate-dependent decarboxylase A388_01215 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_01215 IPR015424 Pyridoxal phosphate-dependent transferase A388_01215 IPR021115 Pyridoxal-phosphate binding site A388_01215 IPR023523 Histidine decarboxylase, bacteria A388_01217 IPR003439 ABC transporter-like A388_01217 IPR003593 AAA+ ATPase domain A388_01217 IPR011527 ABC transporter type 1, transmembrane domain A388_01217 IPR017871 ABC transporter, conserved site A388_01217 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01217 IPR036640 A388_01217 A388_01218 IPR003439 ABC transporter-like A388_01218 IPR003593 AAA+ ATPase domain A388_01218 IPR011527 ABC transporter type 1, transmembrane domain A388_01218 IPR017871 ABC transporter, conserved site A388_01218 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01218 IPR036640 A388_01218 A388_01219 IPR001031 Thioesterase A388_01219 IPR029058 Alpha/Beta hydrolase fold A388_01220 IPR003542 Enterobactin synthetase-like, component D A388_01220 IPR008278 4'-phosphopantetheinyl transferase superfamily A388_01220 IPR037143 A388_01220 A388_01221 IPR004561 Isochorismate synthase A388_01221 IPR005801 ADC synthase A388_01221 IPR015890 Chorismate binding, C-terminal A388_01222 IPR002477 Peptidoglycan binding-like A388_01222 IPR005490 L,D-transpeptidase catalytic domain A388_01222 IPR036365 A388_01222 A388_01222 IPR036366 A388_01222 A388_01222 IPR038063 A388_01222 A388_01223 IPR000257 Uroporphyrinogen decarboxylase (URO-D) A388_01223 IPR006361 Uroporphyrinogen decarboxylase HemE A388_01223 IPR038071 A388_01223 A388_01224 IPR008535 Protein of unknown function DUF817 A388_01225 IPR021383 Protein of unknown function DUF3015 A388_01226 IPR025178 Domain of unknown function DUF4105 A388_01227 IPR001466 Beta-lactamase-related A388_01227 IPR001586 Beta-lactamase, class-C active site A388_01227 IPR012338 Beta-lactamase/transpeptidase-like A388_01228 IPR001584 Integrase, catalytic core A388_01228 IPR012337 Ribonuclease H-like domain A388_01228 IPR025246 Transposase IS30-like HTH domain A388_01228 IPR036397 A388_01228 A388_01229 IPR001474 GTP cyclohydrolase I A388_01229 IPR018234 GTP cyclohydrolase I, conserved site A388_01229 IPR020602 GTP cyclohydrolase I domain A388_01230 IPR002346 Molybdopterin dehydrogenase, FAD-binding A388_01230 IPR002888 [2Fe-2S]-binding A388_01230 IPR005107 CO dehydrogenase flavoprotein, C-terminal A388_01230 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site A388_01230 IPR012175 Xanthine dehydrogenase, small subunit, bacteria A388_01230 IPR012675 Beta-grasp domain A388_01230 IPR014307 Xanthine dehydrogenase, small subunit A388_01230 IPR016167 FAD-binding, type 2, subdomain 1 A388_01230 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 A388_01230 IPR036010 A388_01230 A388_01230 IPR036318 A388_01230 A388_01230 IPR036683 A388_01230 A388_01230 IPR036884 A388_01230 A388_01231 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead A388_01231 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding A388_01231 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit A388_01231 IPR036856 A388_01231 A388_01231 IPR037165 A388_01231 A388_01232 IPR003777 XdhC- CoxI A388_01232 IPR014308 Xanthine dehydrogenase accessory protein XdhC A388_01232 IPR027051 XdhC Rossmann domain A388_01232 IPR036291 A388_01232 A388_01233 IPR002625 Smr protein/MutS2 C-terminal A388_01233 IPR036063 A388_01233 A388_01234 IPR001468 Indole-3-glycerol phosphate synthase, conserved site A388_01234 IPR011060 Ribulose-phosphate binding barrel A388_01234 IPR013785 Aldolase-type TIM barrel A388_01234 IPR013798 Indole-3-glycerol phosphate synthase A388_01235 IPR000312 Glycosyl transferase, family 3 A388_01235 IPR005940 Anthranilate phosphoribosyl transferase A388_01235 IPR017459 Glycosyl transferase family 3, N-terminal domain A388_01235 IPR035902 A388_01235 A388_01235 IPR036320 A388_01235 A388_01236 IPR000531 TonB-dependent receptor, beta-barrel A388_01236 IPR012910 TonB-dependent receptor, plug A388_01236 IPR037066 A388_01236 A388_01237 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal A388_01237 IPR024571 ERAP1-like C-terminal domain A388_01238 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain A388_01238 IPR017926 Glutamine amidotransferase A388_01238 IPR029062 Class I glutamine amidotransferase-like A388_01239 IPR000587 Creatinase, N-terminal A388_01239 IPR000994 Peptidase M24, structural domain A388_01239 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal A388_01239 IPR032416 A388_01239 A388_01239 IPR036005 A388_01239 A388_01240 IPR000109 Proton-dependent oligopeptide transporter family A388_01240 IPR005279 Amino acid/peptide transporter family A388_01240 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site A388_01240 IPR036259 A388_01240 A388_01241 IPR001637 Glutamine synthetase class-I, adenylation site A388_01241 IPR004809 Glutamine synthetase type I A388_01241 IPR008146 Glutamine synthetase, catalytic domain A388_01241 IPR008147 Glutamine synthetase, beta-Grasp A388_01241 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain A388_01241 IPR027302 Glutamine synthetase, N-terminal conserved site A388_01241 IPR027303 Glutamine synthetase, glycine-rich site A388_01241 IPR036651 A388_01241 A388_01242 IPR007440 Chorismate--pyruvate lyase A388_01242 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain A388_01243 IPR000537 UbiA prenyltransferase family A388_01243 IPR006370 4-hydroxybenzoate polyprenyl transferase A388_01244 IPR005152 Lipase, secreted A388_01244 IPR029058 Alpha/Beta hydrolase fold A388_01246 IPR024402 Domain of unknown function DUF2726 A388_01250 IPR001189 Manganese/iron superoxide dismutase A388_01250 IPR019831 Manganese/iron superoxide dismutase, N-terminal A388_01250 IPR019832 Manganese/iron superoxide dismutase, C-terminal A388_01250 IPR019833 Manganese/iron superoxide dismutase, binding site A388_01250 IPR036314 A388_01250 A388_01250 IPR036324 A388_01250 A388_01251 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 A388_01251 IPR036069 A388_01251 A388_01252 IPR001478 PDZ domain A388_01252 IPR001940 Peptidase S1C A388_01252 IPR009003 Trypsin-like cysteine/serine peptidase domain A388_01252 IPR036034 A388_01252 A388_01253 IPR002646 Poly A polymerase, head domain A388_01253 IPR012006 tRNA nucleotidyltransferase, proteobacteria A388_01253 IPR032828 A388_01253 A388_01254 IPR002505 Phosphate acetyl/butaryl transferase A388_01254 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase A388_01254 IPR012301 Malic enzyme, N-terminal domain A388_01254 IPR012302 Malic enzyme, NAD-binding A388_01254 IPR036291 A388_01254 A388_01254 IPR037062 A388_01254 A388_01255 IPR000014 PAS domain A388_01255 IPR000160 GGDEF domain A388_01255 IPR001610 PAC motif A388_01255 IPR001633 EAL domain A388_01255 IPR013655 PAS fold-3 A388_01255 IPR013767 PAS fold A388_01255 IPR029787 Nucleotide cyclase A388_01255 IPR035919 A388_01255 A388_01255 IPR035965 A388_01255 A388_01256 IPR006700 Ribosomal RNA small subunit methyltransferase E A388_01256 IPR015947 PUA-like domain A388_01256 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal A388_01256 IPR029028 Alpha/beta knot methyltransferases A388_01257 IPR003171 Methylenetetrahydrofolate reductase A388_01257 IPR004620 5,10-methylenetetrahydrofolate reductase A388_01257 IPR029041 FAD-linked oxidoreductase-like A388_01258 IPR000043 Adenosylhomocysteinase A388_01258 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A388_01258 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site A388_01258 IPR034373 A388_01258 A388_01258 IPR036291 A388_01258 A388_01259 IPR005074 Peptidase C39, bacteriocin processing A388_01260 IPR003779 Carboxymuconolactone decarboxylase-like A388_01260 IPR029032 AhpD-like A388_01261 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_01261 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_01261 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_01261 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type A388_01261 IPR036250 A388_01261 A388_01261 IPR037069 A388_01261 A388_01262 IPR003698 Lipoyl synthase A388_01262 IPR006638 Elongator protein 3/MiaB/NifB A388_01262 IPR007197 Radical SAM A388_01262 IPR013785 Aldolase-type TIM barrel A388_01262 IPR031691 A388_01262 A388_01263 IPR001100 A388_01263 A388_01263 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A388_01263 IPR016156 FAD/NAD-linked reductase, dimerisation domain A388_01263 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_01263 IPR036188 A388_01263 A388_01265 IPR011701 Major facilitator superfamily A388_01265 IPR036259 A388_01265 A388_01266 IPR011701 Major facilitator superfamily A388_01266 IPR036259 A388_01266 A388_01267 IPR005618 Outer membrane protein, OmpW A388_01267 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel A388_01269 IPR000994 Peptidase M24, structural domain A388_01269 IPR001714 Peptidase M24, methionine aminopeptidase A388_01269 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 A388_01269 IPR036005 A388_01269 A388_01270 IPR001865 Ribosomal protein S2 A388_01270 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid A388_01270 IPR018130 Ribosomal protein S2, conserved site A388_01270 IPR023591 Ribosomal protein S2, flavodoxin-like domain A388_01271 IPR001816 Translation elongation factor EFTs/EF1B A388_01271 IPR009060 UBA-like A388_01271 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation A388_01271 IPR018101 Translation elongation factor Ts, conserved site A388_01271 IPR036402 A388_01271 A388_01272 IPR021856 Protein of unknown function DUF3465 A388_01273 IPR003313 AraC-type arabinose-binding/dimerisation domain A388_01273 IPR009057 Homeodomain-like A388_01273 IPR018060 DNA binding HTH domain, AraC-type A388_01273 IPR018062 HTH domain AraC-type, conserved site A388_01273 IPR020449 Transcription regulator HTH, AraC- type A388_01273 IPR037923 A388_01273 A388_01274 IPR011606 Branched-chain amino acid transport, permease A388_01275 IPR008407 Branched-chain amino acid transport, AzlD A388_01276 IPR009305 Protein of unknown function DUF962 A388_01277 IPR009009 RlpA-like double-psi beta-barrel domain A388_01277 IPR012997 Rare lipoprotein A, bacterial A388_01277 IPR034718 A388_01277 A388_01277 IPR036908 A388_01277 A388_01278 IPR011757 Lytic transglycosylase MltB A388_01278 IPR023346 Lysozyme-like domain A388_01278 IPR031304 A388_01278 A388_01279 IPR001182 Cell cycle protein FtsW/RodA A388_01279 IPR011923 Rod shape-determining protein RodA A388_01279 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site A388_01281 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 A388_01281 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal A388_01281 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF A388_01282 IPR000412 ABC-2 transporter A388_01282 IPR013525 ABC-2 type transporter A388_01283 IPR003439 ABC transporter-like A388_01283 IPR003593 AAA+ ATPase domain A388_01283 IPR017871 ABC transporter, conserved site A388_01283 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01284 IPR002104 Integrase, catalytic A388_01284 IPR010998 Integrase, Lambda-type, N-terminal A388_01284 IPR011010 DNA breaking-rejoining enzyme, catalytic core A388_01284 IPR013762 Integrase-like, catalytic core A388_01288 IPR002559 Transposase, IS4-like A388_01288 IPR012337 Ribonuclease H-like domain A388_01289 IPR002559 Transposase, IS4-like A388_01289 IPR012337 Ribonuclease H-like domain A388_01292 IPR011335 Restriction endonuclease type II-like A388_01292 IPR011604 Exonuclease, phage-type/RecB, C-terminal A388_01297 IPR003356 DNA methylase, adenine-specific A388_01297 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_01297 IPR038333 A388_01297 A388_01299 IPR001387 Cro/C1-type helix-turn-helix domain A388_01299 IPR010982 Lambda repressor-like, DNA-binding domain A388_01299 IPR015927 Peptidase S24/S26A/S26B/S26C A388_01299 IPR036286 A388_01299 A388_01300 IPR010982 Lambda repressor-like, DNA-binding domain A388_01304 IPR006497 Bacteriophage lambda, GpO, N-terminal A388_01304 IPR036388 A388_01304 A388_01305 IPR003593 AAA+ ATPase domain A388_01305 IPR007693 DNA helicase, DnaB-like, N-terminal A388_01305 IPR007694 DNA helicase, DnaB-like, C-terminal A388_01305 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal A388_01305 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01305 IPR036185 A388_01305 A388_01325 IPR018738 Protein of unknown function DUF2280 A388_01326 IPR006517 Archaeophage PsiM2, terminase large subunit A388_01326 IPR035421 A388_01326 A388_01327 IPR025129 Domain of unknown function DUF4055 A388_01328 IPR006528 Phage head morphogenesis domain A388_01334 IPR018803 Putative stress-responsive protein A388_01339 IPR025395 Protein of unknown function DUF4128 A388_01345 IPR005569 Arc-like DNA binding A388_01345 IPR010985 Ribbon-helix-helix A388_01345 IPR013321 Arc-type ribbon-helix-helix A388_01346 IPR005569 Arc-like DNA binding A388_01346 IPR010985 Ribbon-helix-helix A388_01346 IPR013321 Arc-type ribbon-helix-helix A388_01347 IPR013557 AntA/AntB antirepressor A388_01348 IPR003497 BRO N-terminal domain A388_01349 IPR005569 Arc-like DNA binding A388_01349 IPR010985 Ribbon-helix-helix A388_01349 IPR013321 Arc-type ribbon-helix-helix A388_01350 IPR005569 Arc-like DNA binding A388_01350 IPR010985 Ribbon-helix-helix A388_01350 IPR013321 Arc-type ribbon-helix-helix A388_01354 IPR008258 Lytic transglycosylase-like SLT domain A388_01354 IPR013491 Caudovirus, tape measure, N-terminal A388_01354 IPR023346 Lysozyme-like domain A388_01356 IPR014974 Domain of unknown function DUF1833 A388_01361 IPR002196 Glycoside hydrolase, family 24 A388_01361 IPR023346 Lysozyme-like domain A388_01362 IPR031876 A388_01362 A388_01366 IPR012337 Ribonuclease H-like domain A388_01366 IPR013520 Exonuclease, RNase T/DNA polymerase III A388_01366 IPR024530 Protein of unknown function DUF3820 A388_01366 IPR036397 A388_01366 A388_01367 IPR005152 Lipase, secreted A388_01367 IPR029058 Alpha/Beta hydrolase fold A388_01368 IPR001085 Serine hydroxymethyltransferase A388_01368 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_01368 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_01368 IPR015424 Pyridoxal phosphate-dependent transferase A388_01368 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site A388_01368 IPR039429 A388_01368 A388_01369 IPR003423 Outer membrane efflux protein A388_01369 IPR010131 RND efflux system, outer membrane lipoprotein, NodT A388_01370 IPR001036 Acriflavin resistance protein A388_01370 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 A388_01370 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains A388_01371 IPR006143 RND efflux pump, membrane fusion protein A388_01371 IPR032317 A388_01371 A388_01372 IPR000847 Transcription regulator HTH, LysR A388_01372 IPR005119 LysR, substrate-binding A388_01372 IPR036388 A388_01372 A388_01372 IPR036390 A388_01372 A388_01373 IPR001638 Extracellular solute-binding protein, family 3 A388_01373 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein A388_01373 IPR018313 Extracellular solute-binding protein, family 3, conserved site A388_01374 IPR000515 MetI-like domain A388_01374 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family A388_01374 IPR035906 A388_01374 A388_01375 IPR000515 MetI-like domain A388_01375 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family A388_01375 IPR035906 A388_01375 A388_01376 IPR003439 ABC transporter-like A388_01376 IPR003593 AAA+ ATPase domain A388_01376 IPR017871 ABC transporter, conserved site A388_01376 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01376 IPR030679 A388_01376 A388_01377 IPR000390 Small multidrug resistance protein family A388_01378 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site A388_01379 IPR001539 Peptidase U32 A388_01379 IPR032525 A388_01379 A388_01380 IPR000524 Transcription regulator HTH, GntR A388_01380 IPR004839 Aminotransferase, class I/classII A388_01380 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_01380 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_01380 IPR015424 Pyridoxal phosphate-dependent transferase A388_01380 IPR036388 A388_01380 A388_01380 IPR036390 A388_01380 A388_01381 IPR003719 Phenazine biosynthesis PhzF protein A388_01382 IPR001433 Oxidoreductase FAD/NAD(P)-binding A388_01382 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase A388_01382 IPR008333 Oxidoreductase, FAD-binding domain A388_01382 IPR017938 Riboflavin synthase-like beta-barrel A388_01382 IPR039261 A388_01382 A388_01383 IPR023370 TsaA-like domain A388_01383 IPR036413 A388_01383 A388_01383 IPR036414 A388_01383 A388_01384 IPR003416 MgtC/SapB/SrpB transporter A388_01384 IPR025105 Domain of unknown function DUF4010 A388_01385 IPR001482 Type II secretion system protein E A388_01385 IPR003593 AAA+ ATPase domain A388_01385 IPR007831 General secretory system II, protein E, N-terminal A388_01385 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01385 IPR037257 A388_01385 A388_01386 IPR005220 Viral OB-fold, YgiW A388_01386 IPR036700 A388_01386 A388_01387 IPR001789 Signal transduction response regulator, receiver domain A388_01387 IPR001867 Signal transduction response regulator, C-terminal A388_01387 IPR011006 CheY-like superfamily A388_01387 IPR036388 A388_01387 A388_01388 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_01388 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain A388_01388 IPR004358 Signal transduction histidine kinase-related protein, C-terminal A388_01388 IPR036097 A388_01388 A388_01388 IPR036890 A388_01388 A388_01389 IPR019600 Hemin uptake protein HemP A388_01390 IPR000086 NUDIX hydrolase domain A388_01390 IPR013785 Aldolase-type TIM barrel A388_01390 IPR015797 NUDIX hydrolase domain-like A388_01390 IPR020084 NUDIX hydrolase, conserved site A388_01390 IPR020476 NUDIX hydrolase A388_01390 IPR022998 Thiamin phosphate synthase superfamily A388_01390 IPR036206 A388_01390 A388_01391 IPR011990 Tetratricopeptide-like helical domain A388_01392 IPR001264 Glycosyl transferase, family 51 A388_01392 IPR001460 Penicillin-binding protein, transpeptidase A388_01392 IPR011813 Penicillin-binding protein 1B A388_01392 IPR012338 Beta-lactamase/transpeptidase-like A388_01392 IPR023346 Lysozyme-like domain A388_01392 IPR028166 Bifunctional transglycosylase second domain A388_01392 IPR036950 A388_01392 A388_01393 IPR002504 Inorganic polyphosphate/ATP-NAD kinase A388_01393 IPR016064 ATP-NAD kinase-like domain A388_01393 IPR017437 ATP-NAD kinase, PpnK-type, all-beta A388_01393 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 A388_01394 IPR009749 Protein of unknown function DUF1315 A388_01395 IPR000312 Glycosyl transferase, family 3 A388_01395 IPR017459 Glycosyl transferase family 3, N-terminal domain A388_01395 IPR035902 A388_01395 A388_01395 IPR036320 A388_01395 A388_01396 IPR001991 Sodium:dicarboxylate symporter A388_01396 IPR018107 Sodium:dicarboxylate symporter, conserved site A388_01396 IPR023954 C4-dicarboxylate transport protein A388_01396 IPR036458 A388_01396 A388_01397 IPR006089 Acyl-CoA dehydrogenase, conserved site A388_01397 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_01397 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_01397 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_01397 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_01397 IPR036250 A388_01397 A388_01397 IPR037069 A388_01397 A388_01398 IPR000801 Putative esterase A388_01398 IPR029058 Alpha/Beta hydrolase fold A388_01399 IPR001086 Prephenate dehydratase A388_01399 IPR002701 Chorismate mutase A388_01399 IPR002912 ACT domain A388_01399 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase A388_01399 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain A388_01399 IPR018528 Prephenate dehydratase, conserved site A388_01399 IPR036263 A388_01399 A388_01399 IPR036979 A388_01399 A388_01400 IPR001986 Enolpyruvate transferase domain A388_01400 IPR003099 Prephenate dehydrogenase A388_01400 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase A388_01400 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_01400 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta A388_01400 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site A388_01400 IPR036291 A388_01400 A388_01400 IPR036968 A388_01400 A388_01402 IPR001160 Peptidase M20C, Xaa-His dipeptidase A388_01402 IPR002933 Peptidase M20 A388_01402 IPR011650 Peptidase M20, dimerisation domain A388_01403 IPR001279 Beta-lactamase-like A388_01403 IPR013471 Ribonuclease Z/BN A388_01403 IPR036866 A388_01403 A388_01404 IPR029058 Alpha/Beta hydrolase fold A388_01405 IPR005583 Uncharacterised protein family UPF0246 A388_01406 IPR008867 Thiazole biosynthesis A388_01406 IPR013785 Aldolase-type TIM barrel A388_01406 IPR033983 A388_01406 A388_01407 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 A388_01407 IPR010035 ThiS, thiamine-biosynthesis A388_01407 IPR012675 Beta-grasp domain A388_01407 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp A388_01408 IPR006696 Protein of unknown function DUF423 A388_01409 IPR000943 RNA polymerase sigma-70 A388_01409 IPR007627 RNA polymerase sigma-70 region 2 A388_01409 IPR007630 RNA polymerase sigma-70 region 4 A388_01409 IPR009042 RNA polymerase sigma-70 region 1.2 A388_01409 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria A388_01409 IPR013324 RNA polymerase sigma factor, region 3/4 A388_01409 IPR013325 RNA polymerase sigma factor, region 2 A388_01409 IPR014284 RNA polymerase sigma-70 like domain A388_01409 IPR036388 A388_01409 A388_01410 IPR001455 TusA-like domain A388_01410 IPR036868 A388_01410 A388_01411 IPR002059 Cold-shock protein, DNA-binding A388_01411 IPR011129 Cold shock protein A388_01411 IPR012156 Cold shock, CspA A388_01411 IPR012340 Nucleic acid-binding, OB-fold A388_01411 IPR019844 Cold-shock conserved site A388_01412 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site A388_01412 IPR001650 Helicase, C-terminal A388_01412 IPR011545 DEAD/DEAH box helicase domain A388_01412 IPR014001 Helicase, superfamily 1/2, ATP-binding domain A388_01412 IPR023554 RNA helicase, ATP-dependent, RhlB-type A388_01412 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01414 IPR000415 Nitroreductase-like A388_01414 IPR026021 Putative NAD(P)H nitroreductase YdjA-like A388_01414 IPR029479 Nitroreductase A388_01415 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal A388_01415 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent A388_01415 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_01415 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal A388_01415 IPR013328 Dehydrogenase, multihelical A388_01415 IPR036291 A388_01415 A388_01416 IPR013078 Histidine phosphatase superfamily, clade-1 A388_01416 IPR029033 Histidine phosphatase superfamily A388_01417 IPR007812 Type II secretion system protein L A388_01417 IPR024230 GspL, cytoplasmic actin-ATPase-like domain A388_01417 IPR025691 GspL periplasmic domain A388_01418 IPR007690 Type II secretion system, protein M A388_01418 IPR023229 Type II secretion system protein M, periplasmic domain A388_01419 IPR001295 Dihydroorotate dehydrogenase, conserved site A388_01419 IPR005719 Dihydroorotate dehydrogenase, class 2 A388_01419 IPR005720 Dihydroorotate dehydrogenase domain A388_01419 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 A388_01419 IPR013785 Aldolase-type TIM barrel A388_01420 IPR003825 Colicin V production, CvpA A388_01421 IPR000836 Phosphoribosyltransferase domain A388_01421 IPR005854 Amidophosphoribosyl transferase A388_01421 IPR029055 Nucleophile aminohydrolases, N-terminal A388_01421 IPR029057 Phosphoribosyltransferase-like A388_01422 IPR001915 Peptidase M48 A388_01424 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A388_01424 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain A388_01424 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 A388_01424 IPR036291 A388_01424 A388_01425 IPR001915 Peptidase M48 A388_01425 IPR011990 Tetratricopeptide-like helical domain A388_01425 IPR030873 A388_01425 A388_01426 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related A388_01426 IPR019004 Uncharacterised domain YOR215C, mitochondrial A388_01426 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal A388_01427 IPR001911 Ribosomal protein S21 A388_01427 IPR018278 Ribosomal protein S21, conserved site A388_01427 IPR038380 A388_01427 A388_01428 IPR000905 Gcp-like domain A388_01428 IPR017860 Peptidase M22, conserved site A388_01428 IPR017861 Kae1/YgjD family A388_01428 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD A388_01430 IPR008533 Domain of unknown function DUF815 A388_01430 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01431 IPR002641 Patatin/Phospholipase A2-related A388_01431 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase A388_01431 IPR021771 Triacylglycerol lipase A388_01432 IPR000719 Protein kinase domain A388_01432 IPR011009 Protein kinase-like domain A388_01437 IPR005119 LysR, substrate-binding A388_01438 IPR002559 Transposase, IS4-like A388_01438 IPR012337 Ribonuclease H-like domain A388_01439 IPR002559 Transposase, IS4-like A388_01439 IPR012337 Ribonuclease H-like domain A388_01440 IPR001647 DNA-binding HTH domain, TetR-type A388_01440 IPR009057 Homeodomain-like A388_01441 IPR000620 Drug/metabolite transporter A388_01442 IPR007498 Paraquat-inducible protein A A388_01443 IPR007498 Paraquat-inducible protein A A388_01444 IPR003399 Mammalian cell entry-related A388_01445 IPR005586 Protein of unknown function DUF330 A388_01446 IPR000895 Transthyretin/hydroxyisourate hydrolase A388_01446 IPR014306 Hydroxyisourate hydrolase A388_01446 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily A388_01446 IPR023419 Transthyretin, conserved site A388_01446 IPR036817 A388_01446 A388_01447 IPR005624 Domain of unknown function DUF336 A388_01447 IPR038084 A388_01447 A388_01448 IPR001789 Signal transduction response regulator, receiver domain A388_01448 IPR001867 Signal transduction response regulator, C-terminal A388_01448 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response A388_01448 IPR011006 CheY-like superfamily A388_01448 IPR036388 A388_01448 A388_01449 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_01449 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain A388_01449 IPR006290 Heavy metal sensor kinase A388_01449 IPR036097 A388_01449 A388_01449 IPR036890 A388_01449 A388_01450 IPR000566 Lipocalin/cytosolic fatty-acid binding domain A388_01450 IPR002446 Lipocalin, bacterial A388_01450 IPR012674 Calycin A388_01450 IPR022271 Lipocalin, ApoD type A388_01450 IPR022272 Lipocalin family conserved site A388_01451 IPR005804 Fatty acid desaturase, type 1 A388_01451 IPR015876 Fatty acid desaturase, type 1, core A388_01452 IPR036188 A388_01452 A388_01453 IPR010775 Protein of unknown function DUF1365 A388_01454 IPR003333 Mycolic acid cyclopropane synthase A388_01454 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_01455 IPR010721 Protein of unknown function DUF1295 A388_01456 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_01457 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_01457 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain A388_01457 IPR036097 A388_01457 A388_01457 IPR036890 A388_01457 A388_01458 IPR001789 Signal transduction response regulator, receiver domain A388_01458 IPR001867 Signal transduction response regulator, C-terminal A388_01458 IPR011006 CheY-like superfamily A388_01458 IPR016032 Signal transduction response regulator, C-terminal effector A388_01458 IPR036388 A388_01458 A388_01459 IPR016087 Chalcone isomerase A388_01460 IPR032710 A388_01460 A388_01461 IPR000182 GNAT domain A388_01461 IPR016181 Acyl-CoA N-acyltransferase A388_01462 IPR001920 Asp/Glu racemase A388_01462 IPR004380 Aspartate racemase A388_01462 IPR015942 Asp/Glu/hydantoin racemase A388_01463 IPR000620 Drug/metabolite transporter A388_01464 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase A388_01464 IPR011042 Six-bladed beta-propeller, TolB-like A388_01464 IPR012938 Glucose/Sorbosone dehydrogenase A388_01465 IPR000182 GNAT domain A388_01465 IPR016181 Acyl-CoA N-acyltransferase A388_01466 IPR011701 Major facilitator superfamily A388_01466 IPR036259 A388_01466 A388_01467 IPR001647 DNA-binding HTH domain, TetR-type A388_01467 IPR009057 Homeodomain-like A388_01467 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal A388_01467 IPR036271 A388_01467 A388_01468 IPR001991 Sodium:dicarboxylate symporter A388_01468 IPR018107 Sodium:dicarboxylate symporter, conserved site A388_01468 IPR023954 C4-dicarboxylate transport protein A388_01468 IPR036458 A388_01468 A388_01470 IPR001279 Beta-lactamase-like A388_01470 IPR017782 Hydroxyacylglutathione hydrolase A388_01470 IPR032282 A388_01470 A388_01470 IPR036866 A388_01470 A388_01471 IPR000515 MetI-like domain A388_01471 IPR035906 A388_01471 A388_01472 IPR003439 ABC transporter-like A388_01472 IPR003593 AAA+ ATPase domain A388_01472 IPR017871 ABC transporter, conserved site A388_01472 IPR018449 NIL domain A388_01472 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01473 IPR004872 Lipoprotein NlpA family A388_01474 IPR000115 Phosphoribosylglycinamide synthetase A388_01474 IPR011054 Rudiment single hybrid motif A388_01474 IPR013815 ATP-grasp fold, subdomain 1 A388_01474 IPR016185 Pre-ATP-grasp domain A388_01474 IPR020559 Phosphoribosylglycinamide synthetase, conserved site A388_01474 IPR020560 Phosphoribosylglycinamide synthetase, C-domain A388_01474 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain A388_01474 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal A388_01474 IPR037123 A388_01474 A388_01475 IPR002695 AICARFT/IMPCHase bienzyme A388_01475 IPR011607 Methylglyoxal synthase-like domain A388_01475 IPR016193 Cytidine deaminase-like A388_01475 IPR024051 AICAR transformylase domain A388_01475 IPR036914 A388_01475 A388_01476 IPR002197 DNA binding HTH domain, Fis-type A388_01476 IPR005412 DNA-binding protein Fis A388_01476 IPR009057 Homeodomain-like A388_01477 IPR011723 Zinc finger/thioredoxin putative A388_01477 IPR021834 Protein of unknown function DUF3426 A388_01478 IPR004498 Ribosomal protein L11 methyltransferase A388_01478 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_01480 IPR002218 Glucose-inhibited division protein A-related A388_01480 IPR004416 Glucose-inhibited division protein A A388_01480 IPR020595 Glucose-inhibited division protein A-related, conserved site A388_01480 IPR026904 GidA associated domain 3 A388_01480 IPR036188 A388_01480 A388_01481 IPR026881 WYL domain A388_01481 IPR036390 A388_01481 A388_01482 IPR016450 Uncharacterised conserved protein UCP005522 A388_01482 IPR025841 Circularly permuted ATP-grasp type 2 A388_01483 IPR007296 Domain of unknown function DUF403 A388_01484 IPR002931 Transglutaminase-like A388_01484 IPR013589 Bacterial transglutaminase-like, N-terminal A388_01484 IPR038765 A388_01484 A388_01485 IPR001353 Proteasome, subunit alpha/beta A388_01485 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 A388_01485 IPR029055 Nucleophile aminohydrolases, N-terminal A388_01486 IPR000821 Alanine racemase A388_01486 IPR001608 Alanine racemase, N-terminal A388_01486 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal A388_01486 IPR011079 Alanine racemase, C-terminal A388_01486 IPR029066 PLP-binding barrel A388_01487 IPR007692 DNA helicase, DnaB type A388_01487 IPR007693 DNA helicase, DnaB-like, N-terminal A388_01487 IPR007694 DNA helicase, DnaB-like, C-terminal A388_01487 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal A388_01487 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01487 IPR036185 A388_01487 A388_01488 IPR009027 Ribosomal protein L9/RNase H1, N-terminal A388_01488 IPR020069 Ribosomal protein L9, C-terminal A388_01488 IPR020070 Ribosomal protein L9, N-terminal A388_01488 IPR020594 Ribosomal protein L9, bacteria/chloroplast A388_01488 IPR036791 A388_01488 A388_01488 IPR036935 A388_01488 A388_01489 IPR001648 Ribosomal protein S18 A388_01489 IPR018275 Ribosomal protein S18, conserved site A388_01489 IPR036870 A388_01489 A388_01490 IPR000529 Ribosomal protein S6 A388_01490 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 A388_01490 IPR020814 Ribosomal protein S6, plastid/chloroplast A388_01490 IPR020815 Ribosomal protein S6, conserved site A388_01490 IPR035980 A388_01490 A388_01491 IPR000537 UbiA prenyltransferase family A388_01491 IPR006369 Protohaem IX farnesyltransferase A388_01491 IPR030470 A388_01491 A388_01492 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes A388_01492 IPR014210 Cytochrome o ubiquinol oxidase subunit IV A388_01493 IPR000298 Cytochrome c oxidase subunit III domain A388_01493 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle A388_01493 IPR014206 Cytochrome o ubiquinol oxidase, subunit III A388_01493 IPR035973 A388_01493 A388_01494 IPR000883 Cytochrome c oxidase subunit I A388_01494 IPR014207 Cytochrome o ubiquinol oxidase, subunit I A388_01494 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site A388_01494 IPR036927 A388_01494 A388_01495 IPR002429 Cytochrome c oxidase subunit II C-terminal A388_01495 IPR006333 Cytochrome o ubiquinol oxidase subunit II A388_01495 IPR008972 Cupredoxin A388_01495 IPR010514 COX aromatic rich motif A388_01495 IPR036257 A388_01495 A388_01496 IPR010432 RDD A388_01496 IPR025640 Domain of unknown function DUF4339 A388_01497 IPR000121 PEP-utilising enzyme, C-terminal A388_01497 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding A388_01497 IPR006319 Phosphoenolpyruvate synthase A388_01497 IPR008279 PEP-utilising enzyme, mobile domain A388_01497 IPR013815 ATP-grasp fold, subdomain 1 A388_01497 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain A388_01497 IPR018274 PEP-utilising enzyme, active site A388_01497 IPR023151 PEP-utilising enzyme, conserved site A388_01497 IPR036637 A388_01497 A388_01498 IPR005177 Bifunctional kinase-pyrophosphorylase A388_01498 IPR026530 Phosphoenolpyruvate synthase regulatory protein A388_01499 IPR011990 Tetratricopeptide-like helical domain A388_01499 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA A388_01500 IPR002509 Polysaccharide deacetylase A388_01500 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel A388_01500 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB A388_01500 IPR032772 A388_01500 A388_01501 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA A388_01501 IPR029044 Nucleotide-diphospho-sugar transferases A388_01502 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD A388_01503 IPR036188 A388_01503 A388_01504 IPR011251 Luciferase-like domain A388_01504 IPR019949 Luciferase family oxidoreductase, group 1 A388_01504 IPR036661 A388_01504 A388_01507 IPR000847 Transcription regulator HTH, LysR A388_01507 IPR005119 LysR, substrate-binding A388_01507 IPR036388 A388_01507 A388_01507 IPR036390 A388_01507 A388_01508 IPR029062 Class I glutamine amidotransferase-like A388_01508 IPR032633 A388_01508 A388_01509 IPR000352 Peptide chain release factor class I/class II A388_01509 IPR004373 Peptide chain release factor 1 A388_01509 IPR005139 Peptide chain release factor A388_01510 IPR002052 DNA methylase, N-6 adenine-specific, conserved site A388_01510 IPR004556 Modification methylase HemK A388_01510 IPR007848 Methyltransferase small domain A388_01510 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific A388_01510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_01511 IPR000515 MetI-like domain A388_01511 IPR035906 A388_01511 A388_01512 IPR001638 Extracellular solute-binding protein, family 3 A388_01512 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates A388_01512 IPR015168 SsuA/THI5-like A388_01513 IPR009057 Homeodomain-like A388_01513 IPR018060 DNA binding HTH domain, AraC-type A388_01513 IPR032687 A388_01513 A388_01514 IPR002347 Glucose/ribitol dehydrogenase A388_01514 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_01514 IPR036291 A388_01514 A388_01515 IPR006089 Acyl-CoA dehydrogenase, conserved site A388_01515 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_01515 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_01515 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_01515 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_01515 IPR036250 A388_01515 A388_01515 IPR037069 A388_01515 A388_01516 IPR000873 AMP-dependent synthetase/ligase A388_01516 IPR020845 AMP-binding, conserved site A388_01516 IPR025110 AMP-binding enzyme C-terminal domain A388_01517 IPR002563 Flavin reductase-like, FMN-binding A388_01517 IPR012349 FMN-binding split barrel A388_01518 IPR000594 UBA/THIF-type NAD/FAD binding fold A388_01518 IPR035985 A388_01518 A388_01519 IPR004147 UbiB domain A388_01519 IPR011009 Protein kinase-like domain A388_01520 IPR006156 Dihydroneopterin aldolase A388_01520 IPR006157 Dihydroneopterin aldolase/epimerase domain A388_01521 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK A388_01521 IPR035907 A388_01521 A388_01522 IPR004623 Potassium-transporting ATPase A chain A388_01523 IPR001757 Cation-transporting P-type ATPase A388_01523 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA A388_01523 IPR008250 P-type ATPase, A domain A388_01523 IPR018303 P-type ATPase, phosphorylation site A388_01523 IPR023298 P-type ATPase, transmembrane domain A388_01523 IPR023299 P-type ATPase, cytoplasmic domain N A388_01523 IPR036412 A388_01523 A388_01524 IPR003820 Potassium-transporting ATPase C chain A388_01525 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_01525 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain A388_01525 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal A388_01525 IPR004358 Signal transduction histidine kinase-related protein, C-terminal A388_01525 IPR006016 UspA A388_01525 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_01525 IPR025201 Sensor protein KdpD, transmembrane domain A388_01525 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01525 IPR029016 GAF domain-like A388_01525 IPR036097 A388_01525 A388_01525 IPR036890 A388_01525 A388_01525 IPR038318 A388_01525 A388_01526 IPR001789 Signal transduction response regulator, receiver domain A388_01526 IPR001867 Signal transduction response regulator, C-terminal A388_01526 IPR011006 CheY-like superfamily A388_01526 IPR036388 A388_01526 A388_01527 IPR008146 Glutamine synthetase, catalytic domain A388_01527 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain A388_01528 IPR021242 Protein of unknown function DUF2799 A388_01529 IPR009078 Ferritin-like superfamily A388_01529 IPR011566 Ubiquinone biosynthesis protein Coq7 A388_01530 IPR011701 Major facilitator superfamily A388_01530 IPR036259 A388_01530 A388_01531 IPR000184 Bacterial surface antigen (D15) A388_01531 IPR010827 Surface antigen variable number A388_01531 IPR035243 A388_01531 A388_01532 IPR007452 Protein of unknown function DUF490 A388_01534 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha A388_01534 IPR004406 Aconitase B, bacterial A388_01534 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel A388_01534 IPR015929 Aconitase B, N-terminal, bacterial A388_01534 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 A388_01534 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 A388_01534 IPR015933 Aconitase B, HEAT-like, bacterial A388_01534 IPR018136 Aconitase family, 4Fe-4S cluster binding site A388_01534 IPR036008 A388_01534 A388_01534 IPR036288 A388_01534 A388_01536 IPR005821 Ion transport domain A388_01536 IPR028325 Voltage-gated potassium channel A388_01537 IPR011701 Major facilitator superfamily A388_01537 IPR036259 A388_01537 A388_01539 IPR019613 Protein of unknown function DUF4198 A388_01540 IPR000847 Transcription regulator HTH, LysR A388_01540 IPR005119 LysR, substrate-binding A388_01540 IPR036388 A388_01540 A388_01540 IPR036390 A388_01540 A388_01541 IPR007382 Uncharacterised protein family UPF0756, transmembrame A388_01543 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F A388_01543 IPR002942 RNA-binding S4 domain A388_01543 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F A388_01543 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site A388_01543 IPR020103 Pseudouridine synthase, catalytic domain A388_01543 IPR036986 A388_01543 A388_01544 IPR000182 GNAT domain A388_01544 IPR016181 Acyl-CoA N-acyltransferase A388_01544 IPR017255 Acetyltransferase, GNAT, predicted A388_01545 IPR007337 RelB antitoxin/Antitoxin DinJ A388_01545 IPR013321 Arc-type ribbon-helix-helix A388_01546 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F A388_01546 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site A388_01546 IPR020103 Pseudouridine synthase, catalytic domain A388_01547 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE A388_01547 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01548 IPR002099 DNA mismatch repair protein family A388_01548 IPR013507 DNA mismatch repair protein, C-terminal A388_01548 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup A388_01548 IPR014762 DNA mismatch repair, conserved site A388_01548 IPR014790 MutL, C-terminal, dimerisation A388_01548 IPR020568 Ribosomal protein S5 domain 2-type fold A388_01548 IPR020667 DNA mismatch repair protein, MutL A388_01548 IPR036890 A388_01548 A388_01548 IPR037198 A388_01548 A388_01549 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase A388_01549 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01550 IPR005001 Host factor Hfq A388_01550 IPR010920 Like-Sm (LSM) domain A388_01551 IPR000620 Drug/metabolite transporter A388_01552 IPR000415 Nitroreductase-like A388_01552 IPR029479 Nitroreductase A388_01553 IPR004843 Calcineurin-like phosphoesterase domain, apaH type A388_01553 IPR010138 UDP-2,3-diacylglucosamine hydrolase A388_01554 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain A388_01554 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site A388_01554 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase A388_01554 IPR029000 Cyclophilin-like domain A388_01555 IPR000924 Glutamyl/glutaminyl-tRNA synthetase A388_01555 IPR004514 Glutamine-tRNA synthetase A388_01555 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain A388_01555 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_01555 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain A388_01555 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain A388_01555 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain A388_01555 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain A388_01555 IPR022861 Glutamine-tRNA ligase, bacterial A388_01556 IPR017926 Glutamine amidotransferase A388_01556 IPR029062 Class I glutamine amidotransferase-like A388_01557 IPR009246 Ethanolamine ammonia-lyase light chain A388_01558 IPR010628 Ethanolamine ammonia lyase large subunit A388_01558 IPR013785 Aldolase-type TIM barrel A388_01559 IPR002293 Amino acid/polyamine transporter I A388_01559 IPR004757 Ethanolamine permease A388_01560 IPR015590 Aldehyde dehydrogenase domain A388_01560 IPR016160 Aldehyde dehydrogenase, cysteine active site A388_01560 IPR016161 Aldehyde/histidinol dehydrogenase A388_01560 IPR016162 Aldehyde dehydrogenase, N-terminal A388_01560 IPR016163 Aldehyde dehydrogenase, C-terminal A388_01560 IPR029510 Aldehyde dehydrogenase, glutamic acid active site A388_01561 IPR011990 Tetratricopeptide-like helical domain A388_01561 IPR029016 GAF domain-like A388_01562 IPR022742 Putative lysophospholipase A388_01562 IPR029058 Alpha/Beta hydrolase fold A388_01563 IPR001670 Alcohol dehydrogenase, iron-type A388_01563 IPR018211 Alcohol dehydrogenase, iron-type, conserved site A388_01564 IPR003593 AAA+ ATPase domain A388_01564 IPR010285 DNA helicase Pif1 like A388_01564 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01564 IPR029491 Helicase Helix-turn-helix domain A388_01565 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase A388_01565 IPR014347 Tautomerase/MIF superfamily A388_01566 IPR000417 Hydroxyethylthiazole kinase A388_01566 IPR029056 Ribokinase-like A388_01569 IPR012779 Peptidase M1, alanyl aminopeptidase A388_01569 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal A388_01569 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal A388_01569 IPR027268 A388_01569 A388_01569 IPR035414 A388_01569 A388_01569 IPR037144 A388_01569 A388_01569 IPR038438 A388_01569 A388_01570 IPR007893 Spore coat protein U A388_01571 IPR008962 PapD-like A388_01571 IPR013783 Immunoglobulin-like fold A388_01571 IPR016147 PapD, N-terminal, bacterial A388_01572 IPR000015 Outer membrane usher protein A388_01572 IPR025949 PapC-like, C-terminal domain A388_01573 IPR007893 Spore coat protein U A388_01574 IPR004045 Glutathione S-transferase, N-terminal A388_01574 IPR004046 Glutathione S-transferase, C-terminal A388_01574 IPR036249 A388_01574 A388_01574 IPR036282 A388_01574 A388_01575 IPR002347 Glucose/ribitol dehydrogenase A388_01575 IPR036291 A388_01575 A388_01576 IPR002347 Glucose/ribitol dehydrogenase A388_01576 IPR036291 A388_01576 A388_01577 IPR002701 Chorismate mutase A388_01577 IPR008240 Chorismate mutase, periplasmic A388_01577 IPR036263 A388_01577 A388_01578 IPR000485 AsnC-type HTH domain A388_01578 IPR011008 Dimeric alpha-beta barrel A388_01578 IPR019887 Transcription regulator AsnC-type, C-terminal A388_01578 IPR019888 Transcription regulator AsnC-type A388_01578 IPR036388 A388_01578 A388_01578 IPR036390 A388_01578 A388_01580 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01582 IPR001584 Integrase, catalytic core A388_01582 IPR012337 Ribonuclease H-like domain A388_01582 IPR025246 Transposase IS30-like HTH domain A388_01582 IPR036397 A388_01582 A388_01584 IPR001647 DNA-binding HTH domain, TetR-type A388_01584 IPR009057 Homeodomain-like A388_01585 IPR000531 TonB-dependent receptor, beta-barrel A388_01585 IPR010105 TonB-dependent siderophore receptor A388_01585 IPR012910 TonB-dependent receptor, plug A388_01585 IPR036942 A388_01585 A388_01585 IPR037066 A388_01585 A388_01586 IPR006685 Mechanosensitive ion channel MscS A388_01586 IPR010920 Like-Sm (LSM) domain A388_01591 IPR016181 Acyl-CoA N-acyltransferase A388_01592 IPR000531 TonB-dependent receptor, beta-barrel A388_01592 IPR010105 TonB-dependent siderophore receptor A388_01592 IPR010917 TonB-dependent receptor, conserved site A388_01592 IPR012910 TonB-dependent receptor, plug A388_01592 IPR036942 A388_01592 A388_01592 IPR037066 A388_01592 A388_01593 IPR005618 Outer membrane protein, OmpW A388_01593 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel A388_01596 IPR003439 ABC transporter-like A388_01596 IPR003593 AAA+ ATPase domain A388_01596 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01597 IPR006015 Universal stress protein A A388_01597 IPR006016 UspA A388_01597 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_01600 IPR010432 RDD A388_01601 IPR001757 Cation-transporting P-type ATPase A388_01601 IPR004014 Cation-transporting P-type ATPase, N-terminal A388_01601 IPR006415 Magnesium-transporting P-type ATPase, subfamily IIIB A388_01601 IPR008250 P-type ATPase, A domain A388_01601 IPR018303 P-type ATPase, phosphorylation site A388_01601 IPR023214 HAD-like domain A388_01601 IPR023298 P-type ATPase, transmembrane domain A388_01601 IPR023299 P-type ATPase, cytoplasmic domain N A388_01601 IPR036412 A388_01601 A388_01602 IPR003416 MgtC/SapB/SrpB transporter A388_01603 IPR004711 Benzoate transporter A388_01604 IPR000485 AsnC-type HTH domain A388_01604 IPR011008 Dimeric alpha-beta barrel A388_01604 IPR019887 Transcription regulator AsnC-type, C-terminal A388_01604 IPR019888 Transcription regulator AsnC-type A388_01604 IPR036388 A388_01604 A388_01604 IPR036390 A388_01604 A388_01605 IPR001123 Lysine-type exporter protein (LYSE/YGGA) A388_01606 IPR001585 Transaldolase A388_01606 IPR004730 Transaldolase type 1 A388_01606 IPR013785 Aldolase-type TIM barrel A388_01606 IPR018225 Transaldolase, active site A388_01607 IPR000847 Transcription regulator HTH, LysR A388_01607 IPR005119 LysR, substrate-binding A388_01607 IPR036388 A388_01607 A388_01607 IPR036390 A388_01607 A388_01608 IPR007896 Transmembrane pair, bacterial A388_01609 IPR002155 Thiolase A388_01609 IPR016039 Thiolase-like A388_01609 IPR020616 Thiolase, N-terminal A388_01609 IPR020617 Thiolase, C-terminal A388_01610 IPR002347 Glucose/ribitol dehydrogenase A388_01610 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_01610 IPR036291 A388_01610 A388_01611 IPR002539 MaoC-like domain A388_01611 IPR003965 Fatty acid synthase A388_01611 IPR029069 HotDog domain A388_01612 IPR001466 Beta-lactamase-related A388_01612 IPR012338 Beta-lactamase/transpeptidase-like A388_01613 IPR001647 DNA-binding HTH domain, TetR-type A388_01613 IPR009057 Homeodomain-like A388_01613 IPR036271 A388_01613 A388_01614 IPR011701 Major facilitator superfamily A388_01614 IPR036259 A388_01614 A388_01615 IPR001270 ClpA/B family A388_01615 IPR003593 AAA+ ATPase domain A388_01615 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal A388_01615 IPR012763 DNA polymerase III, subunit gamma/ tau A388_01615 IPR022754 DNA polymerase III, gamma subunit, domain III A388_01615 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01617 IPR007312 Phosphoesterase A388_01617 IPR008475 Bacterial phospholipase C, C-terminal domain A388_01617 IPR017767 Bacterial phospholipase C, phosphocholine-specific A388_01617 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha A388_01618 IPR029069 HotDog domain A388_01619 IPR001670 Alcohol dehydrogenase, iron-type A388_01619 IPR018211 Alcohol dehydrogenase, iron-type, conserved site A388_01620 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain A388_01620 IPR015943 WD40/YVTN repeat-like-containing domain A388_01620 IPR019405 Lactonase, 7-bladed beta propeller A388_01621 IPR017867 Protein-tyrosine phosphatase, low molecular weight A388_01621 IPR023485 Phosphotyrosine protein phosphatase I superfamily A388_01621 IPR036196 A388_01621 A388_01622 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase A388_01622 IPR006094 FAD linked oxidase, N-terminal A388_01622 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal A388_01622 IPR016167 FAD-binding, type 2, subdomain 1 A388_01622 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 A388_01622 IPR036318 A388_01622 A388_01622 IPR036635 A388_01622 A388_01623 IPR003848 Domain of unknown function DUF218 A388_01624 IPR022742 Putative lysophospholipase A388_01624 IPR029058 Alpha/Beta hydrolase fold A388_01625 IPR002932 Glutamate synthase domain A388_01625 IPR013785 Aldolase-type TIM barrel A388_01625 IPR024188 Glutamate synthase large subunit-like protein A388_01625 IPR027283 Glutamate synthase large subunit-like protein, bacteria A388_01626 IPR005625 PepSY-associated TM helix A388_01627 IPR001647 DNA-binding HTH domain, TetR-type A388_01627 IPR009057 Homeodomain-like A388_01627 IPR036271 A388_01627 A388_01628 IPR016084 Haem oxygenase-like, multi-helical A388_01629 IPR024989 Major facilitator superfamily associated domain A388_01629 IPR026032 Phenylproprionate/maltose permease A388_01629 IPR036259 A388_01629 A388_01631 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase A388_01631 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain A388_01631 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal A388_01631 IPR005482 Biotin carboxylase, C-terminal A388_01631 IPR011054 Rudiment single hybrid motif A388_01631 IPR013815 ATP-grasp fold, subdomain 1 A388_01631 IPR016185 Pre-ATP-grasp domain A388_01632 IPR000089 Biotin/lipoyl attachment A388_01632 IPR001249 Acetyl-CoA biotin carboxyl carrier A388_01632 IPR011053 Single hybrid motif A388_01633 IPR001874 Dehydroquinase, class II A388_01633 IPR018509 Dehydroquinase, class II, conserved site A388_01633 IPR036441 A388_01633 A388_01634 IPR001126 DNA-repair protein, UmuC-like A388_01634 IPR017961 DNA polymerase, Y-family, little finger domain A388_01634 IPR025188 Domain of unknown function DUF4113 A388_01636 IPR001789 Signal transduction response regulator, receiver domain A388_01636 IPR005561 ANTAR domain A388_01636 IPR008327 Signal transduction response regulator, antiterminator A388_01636 IPR011006 CheY-like superfamily A388_01636 IPR036388 A388_01636 A388_01638 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain A388_01638 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site A388_01638 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain A388_01638 IPR007419 BFD-like [2Fe-2S]-binding domain A388_01638 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB A388_01638 IPR017121 Nitrite reductase [NAD(P)H], large subunit A388_01638 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_01638 IPR036136 A388_01638 A388_01638 IPR036188 A388_01638 A388_01639 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD A388_01639 IPR016156 FAD/NAD-linked reductase, dimerisation domain A388_01639 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_01639 IPR036188 A388_01639 A388_01639 IPR036922 A388_01639 A388_01640 IPR006656 Molybdopterin oxidoreductase A388_01640 IPR006657 Molydopterin dinucleotide-binding domain A388_01640 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain A388_01640 IPR007419 BFD-like [2Fe-2S]-binding domain A388_01640 IPR009010 Aspartate decarboxylase-like domain A388_01640 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site A388_01641 IPR013482 Molybdenum cofactor guanylyltransferase A388_01641 IPR025877 MobA-like NTP transferase domain A388_01641 IPR029044 Nucleotide-diphospho-sugar transferases A388_01642 IPR006656 Molybdopterin oxidoreductase A388_01642 IPR006657 Molydopterin dinucleotide-binding domain A388_01642 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain A388_01642 IPR009010 Aspartate decarboxylase-like domain A388_01643 IPR006638 Elongator protein 3/MiaB/NifB A388_01643 IPR007197 Radical SAM A388_01643 IPR010505 Molybdenum cofactor synthesis C-terminal A388_01643 IPR013483 Molybdenum cofactor biosynthesis protein A A388_01643 IPR013785 Aldolase-type TIM barrel A388_01644 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 A388_01644 IPR012675 Beta-grasp domain A388_01644 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp A388_01645 IPR003448 Molybdopterin biosynthesis MoaE A388_01645 IPR036563 A388_01645 A388_01646 IPR001453 Molybdopterin binding domain A388_01646 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain A388_01646 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA A388_01646 IPR036425 A388_01646 A388_01646 IPR036522 A388_01646 A388_01647 IPR001453 Molybdopterin binding domain A388_01647 IPR005110 MoeA, N-terminal and linker domain A388_01647 IPR005111 MoeA, C-terminal, domain IV A388_01647 IPR036135 A388_01647 A388_01647 IPR036425 A388_01647 A388_01647 IPR036688 A388_01647 A388_01648 IPR002577 Helix-turn-helix, HxlR type A388_01648 IPR036388 A388_01648 A388_01648 IPR036390 A388_01648 A388_01649 IPR000524 Transcription regulator HTH, GntR A388_01649 IPR004839 Aminotransferase, class I/classII A388_01649 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_01649 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_01649 IPR015424 Pyridoxal phosphate-dependent transferase A388_01649 IPR036388 A388_01649 A388_01649 IPR036390 A388_01649 A388_01650 IPR000620 Drug/metabolite transporter A388_01651 IPR007453 Sulphur transfer protein DsrC/TusE A388_01651 IPR025526 DsrC-like domain A388_01653 IPR027396 DsrEFH-like A388_01654 IPR003787 Sulphur relay, DsrE/F-like protein A388_01654 IPR017463 Sulphur relay, TusD/DsrE A388_01654 IPR027396 DsrEFH-like A388_01655 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain A388_01655 IPR036291 A388_01655 A388_01656 IPR000362 Fumarate lyase family A388_01656 IPR005677 Fumarate hydratase, class II A388_01656 IPR008948 L-Aspartase-like A388_01656 IPR018951 Fumarase C, C-terminal A388_01656 IPR020557 Fumarate lyase, conserved site A388_01656 IPR022761 Fumarate lyase, N-terminal A388_01656 IPR024083 Fumarase/histidase, N-terminal A388_01660 IPR006076 FAD dependent oxidoreductase A388_01660 IPR036188 A388_01660 A388_01662 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase A388_01662 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site A388_01662 IPR036571 A388_01662 A388_01663 IPR029021 Protein-tyrosine phosphatase-like A388_01664 IPR002292 Ornithine/putrescine carbamoyltransferase A388_01664 IPR006130 Aspartate/ornithine carbamoyltransferase A388_01664 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain A388_01664 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding A388_01664 IPR024904 Ornithine carbamoyltransferase A388_01664 IPR036901 A388_01664 A388_01665 IPR001647 DNA-binding HTH domain, TetR-type A388_01665 IPR009057 Homeodomain-like A388_01665 IPR036271 A388_01665 A388_01666 IPR001789 Signal transduction response regulator, receiver domain A388_01666 IPR002078 RNA polymerase sigma factor 54 interaction domain A388_01666 IPR002197 DNA binding HTH domain, Fis-type A388_01666 IPR003593 AAA+ ATPase domain A388_01666 IPR009057 Homeodomain-like A388_01666 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) A388_01666 IPR011006 CheY-like superfamily A388_01666 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 A388_01666 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 A388_01666 IPR025944 Sigma-54 interaction domain, conserved site A388_01666 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01667 IPR000014 PAS domain A388_01667 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_01667 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain A388_01667 IPR004358 Signal transduction histidine kinase-related protein, C-terminal A388_01667 IPR013767 PAS fold A388_01667 IPR035965 A388_01667 A388_01667 IPR036097 A388_01667 A388_01667 IPR036890 A388_01667 A388_01668 IPR005839 Methylthiotransferase A388_01668 IPR005840 Ribosomal protein S12 methylthiotransferase RimO A388_01668 IPR006638 Elongator protein 3/MiaB/NifB A388_01668 IPR007197 Radical SAM A388_01668 IPR013848 Methylthiotransferase, N-terminal A388_01668 IPR020612 Methylthiotransferase, conserved site A388_01668 IPR023404 Radical SAM, alpha/beta horseshoe A388_01668 IPR038135 A388_01668 A388_01669 IPR001048 Aspartate/glutamate/uridylate kinase A388_01669 IPR011817 Uridylate kinase A388_01669 IPR015963 Uridylate kinase, bacteria A388_01669 IPR036393 A388_01669 A388_01670 IPR002661 Ribosome recycling factor A388_01670 IPR023584 Ribosome recycling factor domain A388_01670 IPR036191 A388_01670 A388_01671 IPR001441 Decaprenyl diphosphate synthase-like A388_01671 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site A388_01671 IPR036424 A388_01671 A388_01672 IPR000374 Phosphatidate cytidylyltransferase A388_01673 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase A388_01673 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal A388_01673 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal A388_01673 IPR026877 DXP reductoisomerase C-terminal domain A388_01673 IPR036169 A388_01673 A388_01673 IPR036291 A388_01673 A388_01674 IPR001478 PDZ domain A388_01674 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase A388_01674 IPR008915 Peptidase M50 A388_01674 IPR036034 A388_01674 A388_01675 IPR000184 Bacterial surface antigen (D15) A388_01675 IPR010827 Surface antigen variable number A388_01675 IPR023707 Outer membrane protein assembly factor BamA A388_01676 IPR005632 Chaperone protein Skp A388_01676 IPR024930 Skp domain A388_01677 IPR001451 Bacterial transferase hexapeptide repeat A388_01677 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase A388_01677 IPR011004 Trimeric LpxA-like A388_01677 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region A388_01678 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ A388_01678 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ A388_01678 IPR029069 HotDog domain A388_01679 IPR001451 Bacterial transferase hexapeptide repeat A388_01679 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase A388_01679 IPR011004 Trimeric LpxA-like A388_01679 IPR018357 Hexapeptide transferase, conserved site A388_01679 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal A388_01679 IPR037157 A388_01679 A388_01680 IPR011990 Tetratricopeptide-like helical domain A388_01680 IPR019734 Tetratricopeptide repeat A388_01680 IPR032519 A388_01680 A388_01681 IPR003783 Regulatory protein RecX A388_01681 IPR036388 A388_01681 A388_01682 IPR003593 AAA+ ATPase domain A388_01682 IPR013765 DNA recombination and repair protein RecA A388_01682 IPR020584 DNA recombination/repair protein RecA, conserved site A388_01682 IPR023400 DNA recombination and repair protein RecA, C-terminal A388_01682 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01683 IPR002942 RNA-binding S4 domain A388_01683 IPR025708 Heat shock protein 15 A388_01683 IPR036986 A388_01683 A388_01684 IPR006439 HAD hydrolase, subfamily IA A388_01684 IPR023214 HAD-like domain A388_01684 IPR036412 A388_01684 A388_01685 IPR008617 Uncharacterised protein family, YcgJ A388_01688 IPR000182 GNAT domain A388_01688 IPR016181 Acyl-CoA N-acyltransferase A388_01689 IPR000485 AsnC-type HTH domain A388_01689 IPR011008 Dimeric alpha-beta barrel A388_01689 IPR019885 Transcription regulator HTH, AsnC-type, conserved site A388_01689 IPR019887 Transcription regulator AsnC-type, C-terminal A388_01689 IPR019888 Transcription regulator AsnC-type A388_01689 IPR036388 A388_01689 A388_01689 IPR036390 A388_01689 A388_01690 IPR000192 Aminotransferase class V domain A388_01690 IPR010111 Kynureninase A388_01690 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_01690 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_01690 IPR015424 Pyridoxal phosphate-dependent transferase A388_01691 IPR002293 Amino acid/polyamine transporter I A388_01691 IPR004840 Amino acid permease, conserved site A388_01691 IPR004841 Amino acid permease/ SLC12A domain A388_01692 IPR013094 Alpha/beta hydrolase fold-3 A388_01692 IPR029058 Alpha/Beta hydrolase fold A388_01693 IPR000209 Peptidase S8/S53 domain A388_01693 IPR010259 Proteinase inhibitor I9 A388_01693 IPR015500 Peptidase S8, subtilisin-related A388_01693 IPR022398 Peptidase S8, subtilisin, His-active site A388_01693 IPR023827 Peptidase S8, subtilisin, Asp-active site A388_01693 IPR023828 Peptidase S8, subtilisin, Ser-active site A388_01693 IPR036852 A388_01693 A388_01693 IPR037045 A388_01693 A388_01694 IPR002645 STAS domain A388_01694 IPR011547 Sulphate transporter A388_01694 IPR018045 Sulphate anion transporter, conserved site A388_01694 IPR036513 A388_01694 A388_01695 IPR003738 Protein of unknown function DUF159 A388_01695 IPR036590 A388_01695 A388_01696 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase A388_01696 IPR011042 Six-bladed beta-propeller, TolB-like A388_01696 IPR012938 Glucose/Sorbosone dehydrogenase A388_01696 IPR019893 PQQ-dependent dehydrogenase, s-GDH family A388_01697 IPR006015 Universal stress protein A A388_01697 IPR006016 UspA A388_01697 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_01698 IPR000014 PAS domain A388_01698 IPR000160 GGDEF domain A388_01698 IPR001633 EAL domain A388_01698 IPR013655 PAS fold-3 A388_01698 IPR013656 PAS fold-4 A388_01698 IPR029787 Nucleotide cyclase A388_01698 IPR035919 A388_01698 A388_01698 IPR035965 A388_01698 A388_01700 IPR000835 MarR-type HTH domain A388_01700 IPR036388 A388_01700 A388_01700 IPR036390 A388_01700 A388_01701 IPR013229 PEGA A388_01702 IPR003352 Phosphotransferase system, EIIC A388_01702 IPR003501 Phosphotransferase system, EIIB component, type 2/3 A388_01702 IPR006327 Phosphotransferase system, fructose IIC component A388_01702 IPR036095 A388_01702 A388_01703 IPR036095 A388_01703 A388_01704 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site A388_01704 IPR011611 Carbohydrate kinase PfkB A388_01704 IPR017583 Tagatose/fructose phosphokinase A388_01704 IPR022463 Fructose 1-phosphate kinase A388_01704 IPR029056 Ribokinase-like A388_01705 IPR000032 Phosphocarrier HPr protein-like A388_01705 IPR000121 PEP-utilising enzyme, C-terminal A388_01705 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site A388_01705 IPR002178 PTS EIIA type-2 domain A388_01705 IPR006318 Phosphoenolpyruvate-utilising enzyme A388_01705 IPR008279 PEP-utilising enzyme, mobile domain A388_01705 IPR008731 Phosphotransferase system, enzyme I N-terminal A388_01705 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain A388_01705 IPR016152 Phosphotransferase/anion transporter A388_01705 IPR018274 PEP-utilising enzyme, active site A388_01705 IPR023151 PEP-utilising enzyme, conserved site A388_01705 IPR035895 A388_01705 A388_01705 IPR036618 A388_01705 A388_01705 IPR036637 A388_01705 A388_01706 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 A388_01706 IPR022742 Putative lysophospholipase A388_01706 IPR029058 Alpha/Beta hydrolase fold A388_01709 IPR005624 Domain of unknown function DUF336 A388_01709 IPR038084 A388_01709 A388_01710 IPR004685 Branched-chain amino acid transport system II carrier protein A388_01711 IPR000994 Peptidase M24, structural domain A388_01711 IPR001714 Peptidase M24, methionine aminopeptidase A388_01711 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 A388_01711 IPR036005 A388_01711 A388_01712 IPR000847 Transcription regulator HTH, LysR A388_01712 IPR005119 LysR, substrate-binding A388_01712 IPR036388 A388_01712 A388_01712 IPR036390 A388_01712 A388_01714 IPR002109 Glutaredoxin A388_01714 IPR004480 Monothiol glutaredoxin-related A388_01714 IPR014434 Monothiol glutaredoxin A388_01714 IPR036249 A388_01714 A388_01715 IPR004636 Acetylornithine/Succinylornithine transaminase family A388_01715 IPR005814 Aminotransferase class-III A388_01715 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_01715 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_01715 IPR015424 Pyridoxal phosphate-dependent transferase A388_01716 IPR000644 CBS domain A388_01717 IPR021284 Protein of unknown function DUF2750 A388_01718 IPR011990 Tetratricopeptide-like helical domain A388_01721 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain A388_01721 IPR003593 AAA+ ATPase domain A388_01721 IPR004390 Signal-recognition particle receptor FtsY A388_01721 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle A388_01721 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01721 IPR036225 A388_01721 A388_01722 IPR000415 Nitroreductase-like A388_01722 IPR029479 Nitroreductase A388_01723 IPR018635 Uncharacterised protein family UPF0319 A388_01724 IPR011846 Cyd operon protein YbgE A388_01725 IPR011724 Cyd operon protein YbgT A388_01725 IPR012994 Membrane bound YbgT-like A388_01726 IPR003317 Cytochrome d ubiquinol oxidase, subunit II A388_01727 IPR002585 Cytochrome d ubiquinol oxidase, subunit I A388_01729 IPR025668 Transposase DDE domain A388_01730 IPR010840 Protein of unknown function DUF1449 A388_01731 IPR017941 Rieske [2Fe-2S] iron-sulphur domain A388_01731 IPR036922 A388_01731 A388_01732 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site A388_01732 IPR011611 Carbohydrate kinase PfkB A388_01732 IPR029056 Ribokinase-like A388_01733 IPR000531 TonB-dependent receptor, beta-barrel A388_01733 IPR010105 TonB-dependent siderophore receptor A388_01733 IPR012910 TonB-dependent receptor, plug A388_01733 IPR036942 A388_01733 A388_01733 IPR037066 A388_01733 A388_01734 IPR007863 Peptidase M16, C-terminal domain A388_01734 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like A388_01734 IPR011765 Peptidase M16, N-terminal A388_01734 IPR013578 Peptidase M16C associated A388_01735 IPR003187 Phospholipase A1 A388_01735 IPR036541 A388_01735 A388_01736 IPR003445 Cation transporter A388_01736 IPR004772 Potassium uptake protein TrkH family A388_01737 IPR003148 Regulator of K+ conductance, N-terminal A388_01737 IPR036291 A388_01737 A388_01737 IPR036721 A388_01737 A388_01738 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site A388_01738 IPR001721 ACT-like domain A388_01738 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme A388_01738 IPR005787 Threonine dehydratase, biosynthetic A388_01738 IPR036052 A388_01738 A388_01738 IPR038110 A388_01738 A388_01739 IPR004788 Ribose 5-phosphate isomerase, type A A388_01739 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup A388_01739 IPR037171 A388_01739 A388_01740 IPR002725 Protein of unknown function DUF45 A388_01742 IPR000534 Semialdehyde dehydrogenase, NAD-binding A388_01742 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 A388_01742 IPR012280 Semialdehyde dehydrogenase, dimerisation domain A388_01742 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site A388_01742 IPR036291 A388_01742 A388_01744 IPR003769 Adaptor protein ClpS, core A388_01744 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like A388_01744 IPR022935 ATP-dependent Clp protease adaptor protein ClpS A388_01745 IPR001270 ClpA/B family A388_01745 IPR003593 AAA+ ATPase domain A388_01745 IPR003959 ATPase, AAA-type, core A388_01745 IPR004176 Clp, N-terminal A388_01745 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA A388_01745 IPR018368 ClpA/B, conserved site 1 A388_01745 IPR019489 Clp ATPase, C-terminal A388_01745 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01745 IPR028299 ClpA/B, conserved site 2 A388_01745 IPR036628 A388_01745 A388_01746 IPR003844 Uncharacterised protein family UPF0060 A388_01747 IPR006218 DAHP synthetase I/KDSA A388_01747 IPR006219 DHAP synthase, class 1 A388_01747 IPR013785 Aldolase-type TIM barrel A388_01748 IPR000073 Alpha/beta hydrolase fold-1 A388_01748 IPR029058 Alpha/Beta hydrolase fold A388_01749 IPR005149 Transcription regulator PadR N-terminal A388_01749 IPR018309 Transcription regulator PadR, C-terminal A388_01749 IPR036388 A388_01749 A388_01749 IPR036390 A388_01749 A388_01750 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II A388_01750 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal A388_01750 IPR013785 Aldolase-type TIM barrel A388_01750 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_01750 IPR036188 A388_01750 A388_01751 IPR032710 A388_01751 A388_01751 IPR037401 A388_01751 A388_01752 IPR013830 A388_01752 A388_01752 IPR036514 A388_01752 A388_01753 IPR012020 AB-hydrolase YheT, putative A388_01753 IPR022742 Putative lysophospholipase A388_01753 IPR029058 Alpha/Beta hydrolase fold A388_01754 IPR016516 Uncharacterised conserved protein UCP07580 A388_01756 IPR004468 CTP synthase A388_01756 IPR017456 CTP synthase, N-terminal A388_01756 IPR017926 Glutamine amidotransferase A388_01756 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01756 IPR029062 Class I glutamine amidotransferase-like A388_01757 IPR006218 DAHP synthetase I/KDSA A388_01757 IPR006269 3-deoxy-8-phosphooctulonate synthase A388_01757 IPR013785 Aldolase-type TIM barrel A388_01758 IPR000941 Enolase A388_01758 IPR020809 Enolase, conserved site A388_01758 IPR020810 Enolase, C-terminal A388_01758 IPR020811 Enolase, N-terminal A388_01758 IPR029017 Enolase N-terminal domain-like A388_01758 IPR036849 A388_01758 A388_01759 IPR007353 Protein of unknown function DUF421 A388_01759 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain A388_01760 IPR007060 Septum formation initiator FtsL/DivIC A388_01760 IPR023081 Cell division protein FtsB A388_01761 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A388_01761 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site A388_01761 IPR029044 Nucleotide-diphospho-sugar transferases A388_01761 IPR034683 A388_01761 A388_01762 IPR004163 Coenzyme A transferase binding site A388_01762 IPR004165 Coenzyme A transferase family I A388_01762 IPR012792 3-oxoacid CoA-transferase, subunit A A388_01762 IPR037171 A388_01762 A388_01763 IPR004164 Coenzyme A transferase active site A388_01763 IPR004165 Coenzyme A transferase family I A388_01763 IPR012791 3-oxoacid CoA-transferase, subunit B A388_01763 IPR037171 A388_01763 A388_01764 IPR002155 Thiolase A388_01764 IPR012793 Beta-ketoadipyl CoA thiolase A388_01764 IPR016039 Thiolase-like A388_01764 IPR020610 Thiolase, active site A388_01764 IPR020613 Thiolase, conserved site A388_01764 IPR020615 Thiolase, acyl-enzyme intermediate active site A388_01764 IPR020616 Thiolase, N-terminal A388_01764 IPR020617 Thiolase, C-terminal A388_01765 IPR000362 Fumarate lyase family A388_01765 IPR008948 L-Aspartase-like A388_01765 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase A388_01765 IPR019468 Adenylosuccinate lyase C-terminal A388_01765 IPR020557 Fumarate lyase, conserved site A388_01765 IPR022761 Fumarate lyase, N-terminal A388_01765 IPR024083 Fumarase/histidase, N-terminal A388_01766 IPR000073 Alpha/beta hydrolase fold-1 A388_01766 IPR026968 3-oxoadipate enol-lactonase 1/2 A388_01766 IPR029058 Alpha/Beta hydrolase fold A388_01767 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family A388_01767 IPR005829 Sugar transporter, conserved site A388_01767 IPR011701 Major facilitator superfamily A388_01767 IPR036259 A388_01767 A388_01768 IPR003779 Carboxymuconolactone decarboxylase-like A388_01768 IPR012788 4-carboxymuconolactone decarboxylase A388_01768 IPR029032 AhpD-like A388_01769 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal A388_01769 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit A388_01769 IPR015889 Intradiol ring-cleavage dioxygenase, core A388_01769 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal A388_01770 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal A388_01770 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit A388_01770 IPR015889 Intradiol ring-cleavage dioxygenase, core A388_01771 IPR001381 Dehydroquinase class I A388_01771 IPR013785 Aldolase-type TIM barrel A388_01771 IPR018508 3-dehydroquinate dehydratase, active site A388_01772 IPR006626 Parallel beta-helix repeat A388_01772 IPR011050 Pectin lyase fold/virulence factor A388_01772 IPR012334 Pectin lyase fold A388_01772 IPR039448 A388_01772 A388_01773 IPR007049 Carbohydrate-selective porin OprB A388_01773 IPR038673 A388_01773 A388_01774 IPR001479 Quinoprotein dehydrogenase, conserved site A388_01774 IPR002372 Pyrrolo-quinoline quinone repeat A388_01774 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily A388_01774 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related A388_01774 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat A388_01776 IPR007272 Sulphur transport domain A388_01777 IPR007272 Sulphur transport domain A388_01778 IPR001279 Beta-lactamase-like A388_01778 IPR036866 A388_01778 A388_01779 IPR005471 Transcription regulator IclR, N-terminal A388_01779 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR A388_01779 IPR014757 Transcription regulator IclR, C-terminal A388_01779 IPR029016 GAF domain-like A388_01779 IPR036388 A388_01779 A388_01779 IPR036390 A388_01779 A388_01780 IPR000847 Transcription regulator HTH, LysR A388_01780 IPR005119 LysR, substrate-binding A388_01780 IPR036388 A388_01780 A388_01780 IPR036390 A388_01780 A388_01781 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_01781 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_01781 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_01781 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_01781 IPR036250 A388_01781 A388_01781 IPR037069 A388_01781 A388_01782 IPR002575 Aminoglycoside phosphotransferase A388_01782 IPR011009 Protein kinase-like domain A388_01783 IPR013078 Histidine phosphatase superfamily, clade-1 A388_01783 IPR029033 Histidine phosphatase superfamily A388_01784 IPR002347 Glucose/ribitol dehydrogenase A388_01784 IPR036291 A388_01784 A388_01785 IPR005318 Outer membrane porin, bacterial A388_01785 IPR023614 Porin domain A388_01786 IPR011701 Major facilitator superfamily A388_01786 IPR036259 A388_01786 A388_01787 IPR000835 MarR-type HTH domain A388_01787 IPR036388 A388_01787 A388_01787 IPR036390 A388_01787 A388_01788 IPR020556 Amidase, conserved site A388_01788 IPR023631 Amidase signature domain A388_01788 IPR036928 A388_01788 A388_01789 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_01789 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain A388_01789 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_01789 IPR036250 A388_01789 A388_01789 IPR037069 A388_01789 A388_01791 IPR032710 A388_01791 A388_01791 IPR037401 A388_01791 A388_01792 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit A388_01792 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain A388_01792 IPR017941 Rieske [2Fe-2S] iron-sulphur domain A388_01792 IPR036922 A388_01792 A388_01793 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit A388_01793 IPR032710 A388_01793 A388_01794 IPR002347 Glucose/ribitol dehydrogenase A388_01794 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_01794 IPR036291 A388_01794 A388_01795 IPR000951 Phthalate dioxygenase reductase A388_01795 IPR001041 2Fe-2S ferredoxin-type domain A388_01795 IPR001433 Oxidoreductase FAD/NAD(P)-binding A388_01795 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site A388_01795 IPR008333 Oxidoreductase, FAD-binding domain A388_01795 IPR012675 Beta-grasp domain A388_01795 IPR017938 Riboflavin synthase-like beta-barrel A388_01795 IPR036010 A388_01795 A388_01795 IPR039261 A388_01795 A388_01796 IPR002563 Flavin reductase-like, FMN-binding A388_01796 IPR012349 FMN-binding split barrel A388_01796 IPR036388 A388_01796 A388_01796 IPR036390 A388_01796 A388_01797 IPR009057 Homeodomain-like A388_01797 IPR018060 DNA binding HTH domain, AraC-type A388_01797 IPR018062 HTH domain AraC-type, conserved site A388_01797 IPR020449 Transcription regulator HTH, AraC- type A388_01797 IPR035418 A388_01797 A388_01798 IPR000269 Copper amine oxidase A388_01798 IPR012854 Copper amine oxidase-like, N-terminal A388_01798 IPR015798 Copper amine oxidase, C-terminal A388_01798 IPR015800 Copper amine oxidase, N2-terminal A388_01798 IPR015802 Copper amine oxidase, N3-terminal A388_01798 IPR016182 Copper amine oxidase, N-terminal A388_01798 IPR036460 A388_01798 A388_01798 IPR036582 A388_01798 A388_01800 IPR015590 Aldehyde dehydrogenase domain A388_01800 IPR016161 Aldehyde/histidinol dehydrogenase A388_01800 IPR016162 Aldehyde dehydrogenase, N-terminal A388_01800 IPR016163 Aldehyde dehydrogenase, C-terminal A388_01800 IPR029510 Aldehyde dehydrogenase, glutamic acid active site A388_01801 IPR002692 Penicillin amidase-like A388_01801 IPR014395 Penicillin/cephalosporin acylase A388_01801 IPR023343 Penicillin amidase type, domain1 A388_01801 IPR029055 Nucleophile aminohydrolases, N-terminal A388_01802 IPR000073 Alpha/beta hydrolase fold-1 A388_01802 IPR026968 3-oxoadipate enol-lactonase 1/2 A388_01802 IPR029058 Alpha/Beta hydrolase fold A388_01803 IPR002155 Thiolase A388_01803 IPR012793 Beta-ketoadipyl CoA thiolase A388_01803 IPR016039 Thiolase-like A388_01803 IPR020610 Thiolase, active site A388_01803 IPR020613 Thiolase, conserved site A388_01803 IPR020615 Thiolase, acyl-enzyme intermediate active site A388_01803 IPR020616 Thiolase, N-terminal A388_01803 IPR020617 Thiolase, C-terminal A388_01804 IPR004164 Coenzyme A transferase active site A388_01804 IPR004165 Coenzyme A transferase family I A388_01804 IPR012791 3-oxoacid CoA-transferase, subunit B A388_01804 IPR037171 A388_01804 A388_01805 IPR004163 Coenzyme A transferase binding site A388_01805 IPR004165 Coenzyme A transferase family I A388_01805 IPR012792 3-oxoacid CoA-transferase, subunit A A388_01805 IPR037171 A388_01805 A388_01806 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal A388_01806 IPR007535 Catechol dioxygenase, N-terminal A388_01806 IPR012801 Catechol 1,2-dioxygenase, proteobacteria A388_01806 IPR015889 Intradiol ring-cleavage dioxygenase, core A388_01807 IPR003464 Muconolactone delta-isomerase A388_01807 IPR011008 Dimeric alpha-beta barrel A388_01807 IPR026029 Muconolactone isomerase domain A388_01808 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain A388_01808 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal A388_01808 IPR013370 Muconate/chloromuconate cycloisomerase A388_01808 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site A388_01808 IPR029017 Enolase N-terminal domain-like A388_01808 IPR029065 Enolase C-terminal domain-like A388_01808 IPR036849 A388_01808 A388_01809 IPR000847 Transcription regulator HTH, LysR A388_01809 IPR005119 LysR, substrate-binding A388_01809 IPR036388 A388_01809 A388_01809 IPR036390 A388_01809 A388_01810 IPR010239 Conserved hypothetical protein CHP02001 A388_01811 IPR000524 Transcription regulator HTH, GntR A388_01811 IPR008920 Transcription regulator FadR/GntR, C-terminal A388_01811 IPR011711 GntR, C-terminal A388_01811 IPR036388 A388_01811 A388_01811 IPR036390 A388_01811 A388_01812 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase A388_01812 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site A388_01812 IPR037237 A388_01812 A388_01813 IPR011701 Major facilitator superfamily A388_01813 IPR036259 A388_01813 A388_01814 IPR009645 Uncharacterised conserved protein GguC A388_01814 IPR036663 A388_01814 A388_01815 IPR015590 Aldehyde dehydrogenase domain A388_01815 IPR016161 Aldehyde/histidinol dehydrogenase A388_01815 IPR016162 Aldehyde dehydrogenase, N-terminal A388_01815 IPR016163 Aldehyde dehydrogenase, C-terminal A388_01816 IPR023375 Acetoacetate decarboxylase beta barrel domain A388_01817 IPR000073 Alpha/beta hydrolase fold-1 A388_01817 IPR029058 Alpha/Beta hydrolase fold A388_01818 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal A388_01818 IPR013785 Aldolase-type TIM barrel A388_01819 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase A388_01819 IPR036291 A388_01819 A388_01820 IPR002818 ThiJ/PfpI A388_01820 IPR029062 Class I glutamine amidotransferase-like A388_01821 IPR000551 MerR-type HTH domain A388_01821 IPR009061 DNA binding domain, putative A388_01822 IPR002818 ThiJ/PfpI A388_01822 IPR029062 Class I glutamine amidotransferase-like A388_01823 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_01823 IPR036188 A388_01823 A388_01824 IPR000944 Transcription regulator Rrf2-like A388_01824 IPR030489 A388_01824 A388_01824 IPR036388 A388_01824 A388_01824 IPR036390 A388_01824 A388_01825 IPR001279 Beta-lactamase-like A388_01825 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D A388_01825 IPR036866 A388_01825 A388_01826 IPR001647 DNA-binding HTH domain, TetR-type A388_01826 IPR009057 Homeodomain-like A388_01827 IPR009057 Homeodomain-like A388_01827 IPR018060 DNA binding HTH domain, AraC-type A388_01827 IPR020449 Transcription regulator HTH, AraC- type A388_01827 IPR032687 A388_01827 A388_01828 IPR002347 Glucose/ribitol dehydrogenase A388_01828 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_01828 IPR036291 A388_01828 A388_01829 IPR010451 Acetoacetate decarboxylase A388_01829 IPR023375 Acetoacetate decarboxylase beta barrel domain A388_01830 IPR016516 Uncharacterised conserved protein UCP07580 A388_01831 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal A388_01831 IPR013785 Aldolase-type TIM barrel A388_01833 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase A388_01833 IPR011042 Six-bladed beta-propeller, TolB-like A388_01833 IPR012938 Glucose/Sorbosone dehydrogenase A388_01835 IPR007138 Antibiotic biosynthesis monooxygenase-like domain A388_01835 IPR011008 Dimeric alpha-beta barrel A388_01836 IPR000868 Isochorismatase-like A388_01836 IPR036380 A388_01836 A388_01837 IPR000847 Transcription regulator HTH, LysR A388_01837 IPR005119 LysR, substrate-binding A388_01837 IPR036388 A388_01837 A388_01837 IPR036390 A388_01837 A388_01838 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase A388_01838 IPR011042 Six-bladed beta-propeller, TolB-like A388_01838 IPR012938 Glucose/Sorbosone dehydrogenase A388_01838 IPR019893 PQQ-dependent dehydrogenase, s-GDH family A388_01839 IPR003148 Regulator of K+ conductance, N-terminal A388_01839 IPR004771 K+/H+ exchanger A388_01839 IPR006153 Cation/H+ exchanger A388_01839 IPR036291 A388_01839 A388_01839 IPR038770 A388_01839 A388_01841 IPR002933 Peptidase M20 A388_01841 IPR011650 Peptidase M20, dimerisation domain A388_01841 IPR017439 Amidohydrolase A388_01841 IPR036264 A388_01841 A388_01843 IPR001647 DNA-binding HTH domain, TetR-type A388_01843 IPR009057 Homeodomain-like A388_01845 IPR001584 Integrase, catalytic core A388_01845 IPR012337 Ribonuclease H-like domain A388_01845 IPR025246 Transposase IS30-like HTH domain A388_01845 IPR036397 A388_01845 A388_01847 IPR016630 Uncharacterised conserved protein UCP015278 A388_01848 IPR018958 SMI1/KNR4 like domain A388_01848 IPR037883 A388_01848 A388_01850 IPR025668 Transposase DDE domain A388_01852 IPR018756 Domain of unknown function DUF2314 A388_01852 IPR036770 A388_01852 A388_01853 IPR011701 Major facilitator superfamily A388_01853 IPR036259 A388_01853 A388_01854 IPR006680 Amidohydrolase 1 A388_01854 IPR032466 A388_01854 A388_01855 IPR009827 Dicarboxylate carrier MatC N-terminal A388_01856 IPR000524 Transcription regulator HTH, GntR A388_01856 IPR011663 UbiC transcription regulator-associated A388_01856 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain A388_01856 IPR036388 A388_01856 A388_01856 IPR036390 A388_01856 A388_01857 IPR005511 Senescence marker protein-30 (SMP-30) A388_01857 IPR011042 Six-bladed beta-propeller, TolB-like A388_01857 IPR013658 SMP-30/Gluconolactonase/LRE-like region A388_01858 IPR011701 Major facilitator superfamily A388_01858 IPR036259 A388_01858 A388_01859 IPR000847 Transcription regulator HTH, LysR A388_01859 IPR005119 LysR, substrate-binding A388_01859 IPR036388 A388_01859 A388_01859 IPR036390 A388_01859 A388_01860 IPR006750 Protein of unknown function DUF606 A388_01861 IPR006750 Protein of unknown function DUF606 A388_01862 IPR003997 RTX secretion protein D, Gram-negative bacteria A388_01862 IPR039562 A388_01862 A388_01863 IPR011701 Major facilitator superfamily A388_01863 IPR036259 A388_01863 A388_01864 IPR001647 DNA-binding HTH domain, TetR-type A388_01864 IPR009057 Homeodomain-like A388_01864 IPR036271 A388_01864 A388_01864 IPR039536 A388_01864 A388_01865 IPR015590 Aldehyde dehydrogenase domain A388_01865 IPR016161 Aldehyde/histidinol dehydrogenase A388_01865 IPR016162 Aldehyde dehydrogenase, N-terminal A388_01865 IPR016163 Aldehyde dehydrogenase, C-terminal A388_01866 IPR002559 Transposase, IS4-like A388_01866 IPR012337 Ribonuclease H-like domain A388_01867 IPR002559 Transposase, IS4-like A388_01867 IPR012337 Ribonuclease H-like domain A388_01868 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase A388_01868 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site A388_01868 IPR037237 A388_01868 A388_01869 IPR011234 Fumarylacetoacetase, C-terminal-related A388_01869 IPR036663 A388_01869 A388_01870 IPR000847 Transcription regulator HTH, LysR A388_01870 IPR005119 LysR, substrate-binding A388_01870 IPR036388 A388_01870 A388_01870 IPR036390 A388_01870 A388_01871 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain A388_01871 IPR036291 A388_01871 A388_01872 IPR011701 Major facilitator superfamily A388_01872 IPR036259 A388_01872 A388_01873 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding A388_01873 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_01873 IPR013328 Dehydrogenase, multihelical A388_01873 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type A388_01873 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain A388_01873 IPR036291 A388_01873 A388_01874 IPR009057 Homeodomain-like A388_01874 IPR018060 DNA binding HTH domain, AraC-type A388_01874 IPR018062 HTH domain AraC-type, conserved site A388_01875 IPR000836 Phosphoribosyltransferase domain A388_01875 IPR029057 Phosphoribosyltransferase-like A388_01876 IPR007229 Nicotinate phosphoribosyltransferase family A388_01876 IPR013785 Aldolase-type TIM barrel A388_01876 IPR016471 Nicotinamide phosphoribosyl transferase A388_01876 IPR036068 A388_01876 A388_01877 IPR000086 NUDIX hydrolase domain A388_01877 IPR015797 NUDIX hydrolase domain-like A388_01877 IPR036388 A388_01877 A388_01877 IPR036390 A388_01877 A388_01878 IPR003171 Methylenetetrahydrofolate reductase A388_01878 IPR022026 Methylene-tetrahydrofolate reductase C-terminal A388_01878 IPR029041 FAD-linked oxidoreductase-like A388_01880 IPR000792 Transcription regulator LuxR, C-terminal A388_01880 IPR016032 Signal transduction response regulator, C-terminal effector A388_01880 IPR036388 A388_01880 A388_01881 IPR020556 Amidase, conserved site A388_01881 IPR023631 Amidase signature domain A388_01881 IPR036928 A388_01881 A388_01882 IPR025668 Transposase DDE domain A388_01884 IPR000182 GNAT domain A388_01884 IPR016181 Acyl-CoA N-acyltransferase A388_01885 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain A388_01885 IPR029058 Alpha/Beta hydrolase fold A388_01886 IPR000847 Transcription regulator HTH, LysR A388_01886 IPR005119 LysR, substrate-binding A388_01886 IPR036388 A388_01886 A388_01886 IPR036390 A388_01886 A388_01887 IPR002347 Glucose/ribitol dehydrogenase A388_01887 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_01887 IPR036291 A388_01887 A388_01888 IPR002347 Glucose/ribitol dehydrogenase A388_01888 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_01888 IPR036291 A388_01888 A388_01889 IPR022742 Putative lysophospholipase A388_01889 IPR029058 Alpha/Beta hydrolase fold A388_01890 IPR009057 Homeodomain-like A388_01890 IPR018060 DNA binding HTH domain, AraC-type A388_01890 IPR032687 A388_01890 A388_01892 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_01892 IPR003660 HAMP linker domain A388_01892 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain A388_01892 IPR004358 Signal transduction histidine kinase-related protein, C-terminal A388_01892 IPR036097 A388_01892 A388_01892 IPR036890 A388_01892 A388_01893 IPR001789 Signal transduction response regulator, receiver domain A388_01893 IPR001867 Signal transduction response regulator, C-terminal A388_01893 IPR011006 CheY-like superfamily A388_01893 IPR016032 Signal transduction response regulator, C-terminal effector A388_01893 IPR036388 A388_01893 A388_01894 IPR006143 RND efflux pump, membrane fusion protein A388_01894 IPR032317 A388_01894 A388_01895 IPR001036 Acriflavin resistance protein A388_01895 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 A388_01895 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains A388_01896 IPR003423 Outer membrane efflux protein A388_01896 IPR010131 RND efflux system, outer membrane lipoprotein, NodT A388_01897 IPR022742 Putative lysophospholipase A388_01897 IPR029058 Alpha/Beta hydrolase fold A388_01898 IPR036188 A388_01898 A388_01899 IPR001647 DNA-binding HTH domain, TetR-type A388_01899 IPR009057 Homeodomain-like A388_01899 IPR036271 A388_01899 A388_01900 IPR006076 FAD dependent oxidoreductase A388_01900 IPR036188 A388_01900 A388_01902 IPR005017 Membrane protein, aromatic hydrocarbon degradation A388_01904 IPR003491 Replication initiation factor A388_01910 IPR008900 Zona occludens toxin A388_01911 IPR019670 Protein of unkown function DUF2523 A388_01913 IPR008020 Major coat protein, Inovirus-type A388_01916 IPR003491 Replication initiation factor A388_01920 IPR003491 Replication initiation factor A388_01924 IPR006516 Bacteriophage/plasmid replication protein, gene II/X A388_01924 IPR022686 Bacteriophage/plasmid replication protein, gene II/X, N-terminal A388_01924 IPR022688 Bacteriophage/plasmid replication protein, gene II/X, C-terminal A388_01927 IPR008900 Zona occludens toxin A388_01927 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01928 IPR019670 Protein of unkown function DUF2523 A388_01929 IPR008708 TspB virulence factor A388_01930 IPR008020 Major coat protein, Inovirus-type A388_01934 IPR006516 Bacteriophage/plasmid replication protein, gene II/X A388_01934 IPR022686 Bacteriophage/plasmid replication protein, gene II/X, N-terminal A388_01934 IPR022688 Bacteriophage/plasmid replication protein, gene II/X, C-terminal A388_01937 IPR003491 Replication initiation factor A388_01940 IPR025668 Transposase DDE domain A388_01941 IPR002559 Transposase, IS4-like A388_01941 IPR012337 Ribonuclease H-like domain A388_01942 IPR002559 Transposase, IS4-like A388_01942 IPR012337 Ribonuclease H-like domain A388_01944 IPR008966 Adhesion domain A388_01944 IPR036937 A388_01944 A388_01944 IPR039458 A388_01944 A388_01945 IPR001829 Pili assembly chaperone, bacterial A388_01945 IPR008962 PapD-like A388_01945 IPR013783 Immunoglobulin-like fold A388_01945 IPR016147 PapD, N-terminal, bacterial A388_01945 IPR016148 Pili assembly chaperone, C-terminal domain A388_01945 IPR036316 A388_01945 A388_01946 IPR000015 Outer membrane usher protein A388_01946 IPR025885 PapC, N-terminal domain A388_01946 IPR025949 PapC-like, C-terminal domain A388_01946 IPR037224 A388_01946 A388_01947 IPR000259 Fimbrial-type adhesion domain A388_01947 IPR008966 Adhesion domain A388_01947 IPR036937 A388_01947 A388_01948 IPR032620 A388_01948 A388_01949 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site A388_01949 IPR011032 GroES (chaperonin 10)-like A388_01949 IPR013149 Alcohol dehydrogenase, C-terminal A388_01949 IPR013154 Alcohol dehydrogenase GroES-like A388_01949 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase A388_01949 IPR020843 Polyketide synthase, enoylreductase A388_01949 IPR036291 A388_01949 A388_01951 IPR011614 Catalase core domain A388_01951 IPR020835 Catalase-like domain A388_01954 IPR001736 Phospholipase D/Transphosphatidylase A388_01954 IPR025202 Phospholipase D-like domain A388_01955 IPR036895 A388_01955 A388_01958 IPR000180 Membrane dipeptidase, active site A388_01958 IPR008257 Renal dipeptidase family A388_01958 IPR032466 A388_01958 A388_01959 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site A388_01959 IPR006638 Elongator protein 3/MiaB/NifB A388_01959 IPR007197 Radical SAM A388_01959 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria A388_01959 IPR013785 Aldolase-type TIM barrel A388_01959 IPR017200 Radical SAM coenzyme PQQ biosynthesis protein E/heme D1 biosynthesis NirJ A388_01959 IPR023885 4Fe4S-binding SPASM domain A388_01960 IPR008792 Coenzyme PQQ synthesis D A388_01960 IPR022479 Coenzyme PQQ synthesis D, bacteria A388_01961 IPR004305 Thiaminase-2/PQQC A388_01961 IPR011845 Coenzyme PQQ biosynthesis protein C A388_01961 IPR016084 Haem oxygenase-like, multi-helical A388_01962 IPR001279 Beta-lactamase-like A388_01962 IPR011842 Coenzyme PQQ biosynthesis protein B A388_01962 IPR036866 A388_01962 A388_01963 IPR003414 Polyphosphate kinase A388_01963 IPR024953 Polyphosphate kinase middle domain A388_01963 IPR025198 Polyphosphate kinase N-terminal domain A388_01963 IPR025200 Polyphosphate kinase C-terminal domain A388_01963 IPR036830 A388_01963 A388_01963 IPR036832 A388_01963 A388_01964 IPR004843 Calcineurin-like phosphoesterase domain, apaH type A388_01964 IPR006179 5'-Nucleotidase/apyrase A388_01964 IPR008334 5'-Nucleotidase, C-terminal A388_01964 IPR029052 Metallo-dependent phosphatase-like A388_01964 IPR036907 A388_01964 A388_01965 IPR002481 Ferric-uptake regulator A388_01965 IPR036388 A388_01965 A388_01965 IPR036390 A388_01965 A388_01966 IPR000868 Isochorismatase-like A388_01966 IPR016291 Isochorismatase A388_01966 IPR036380 A388_01966 A388_01967 IPR002347 Glucose/ribitol dehydrogenase A388_01967 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase A388_01967 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_01967 IPR036291 A388_01967 A388_01968 IPR003439 ABC transporter-like A388_01968 IPR003593 AAA+ ATPase domain A388_01968 IPR017871 ABC transporter, conserved site A388_01968 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_01969 IPR000515 MetI-like domain A388_01969 IPR011867 Molybdate ABC transporter, permease protein A388_01969 IPR035906 A388_01969 A388_01970 IPR005950 Molybdenum ABC transporter, periplasmic binding protein A388_01971 IPR000847 Transcription regulator HTH, LysR A388_01971 IPR036388 A388_01971 A388_01971 IPR036390 A388_01971 A388_01972 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit A388_01972 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain A388_01972 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site A388_01972 IPR017638 Anthranilate 1,2-dioxygenase, large subunit A388_01972 IPR017941 Rieske [2Fe-2S] iron-sulphur domain A388_01972 IPR036922 A388_01972 A388_01973 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit A388_01973 IPR017640 Anthranilate 1,2-dioxygenase, small subunit A388_01973 IPR032710 A388_01973 A388_01974 IPR001041 2Fe-2S ferredoxin-type domain A388_01974 IPR001221 Phenol hydroxylase reductase A388_01974 IPR001433 Oxidoreductase FAD/NAD(P)-binding A388_01974 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site A388_01974 IPR008333 Oxidoreductase, FAD-binding domain A388_01974 IPR012675 Beta-grasp domain A388_01974 IPR017938 Riboflavin synthase-like beta-barrel A388_01974 IPR036010 A388_01974 A388_01974 IPR039261 A388_01974 A388_01975 IPR009057 Homeodomain-like A388_01975 IPR018060 DNA binding HTH domain, AraC-type A388_01975 IPR035418 A388_01975 A388_01976 IPR025737 MetA-pathway of phenol degradation, putative A388_01977 IPR002563 Flavin reductase-like, FMN-binding A388_01977 IPR012349 FMN-binding split barrel A388_01978 IPR036188 A388_01978 A388_01979 IPR002347 Glucose/ribitol dehydrogenase A388_01979 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_01979 IPR036291 A388_01979 A388_01980 IPR002925 Dienelactone hydrolase A388_01980 IPR029058 Alpha/Beta hydrolase fold A388_01980 IPR032710 A388_01980 A388_01981 IPR005829 Sugar transporter, conserved site A388_01981 IPR011701 Major facilitator superfamily A388_01981 IPR036259 A388_01981 A388_01982 IPR009057 Homeodomain-like A388_01982 IPR018060 DNA binding HTH domain, AraC-type A388_01982 IPR035418 A388_01982 A388_01983 IPR002347 Glucose/ribitol dehydrogenase A388_01983 IPR011294 3-hydroxybutyrate dehydrogenase A388_01983 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_01983 IPR036291 A388_01983 A388_01984 IPR003474 Gluconate transporter A388_01986 IPR000847 Transcription regulator HTH, LysR A388_01986 IPR005119 LysR, substrate-binding A388_01986 IPR036388 A388_01986 A388_01986 IPR036390 A388_01986 A388_01987 IPR004163 Coenzyme A transferase binding site A388_01987 IPR004165 Coenzyme A transferase family I A388_01987 IPR012792 3-oxoacid CoA-transferase, subunit A A388_01987 IPR037171 A388_01987 A388_01988 IPR004164 Coenzyme A transferase active site A388_01988 IPR004165 Coenzyme A transferase family I A388_01988 IPR012791 3-oxoacid CoA-transferase, subunit B A388_01988 IPR037171 A388_01988 A388_01989 IPR006160 Short chain fatty acid transporter AtoE A388_01990 IPR002155 Thiolase A388_01990 IPR016039 Thiolase-like A388_01990 IPR020610 Thiolase, active site A388_01990 IPR020615 Thiolase, acyl-enzyme intermediate active site A388_01990 IPR020616 Thiolase, N-terminal A388_01990 IPR020617 Thiolase, C-terminal A388_01991 IPR000847 Transcription regulator HTH, LysR A388_01991 IPR005119 LysR, substrate-binding A388_01991 IPR036388 A388_01991 A388_01991 IPR036390 A388_01991 A388_01992 IPR000847 Transcription regulator HTH, LysR A388_01992 IPR005119 LysR, substrate-binding A388_01992 IPR036388 A388_01992 A388_01992 IPR036390 A388_01992 A388_01995 IPR000362 Fumarate lyase family A388_01995 IPR008948 L-Aspartase-like A388_01995 IPR018951 Fumarase C, C-terminal A388_01995 IPR020557 Fumarate lyase, conserved site A388_01995 IPR022761 Fumarate lyase, N-terminal A388_01995 IPR024083 Fumarase/histidase, N-terminal A388_01996 IPR000531 TonB-dependent receptor, beta-barrel A388_01996 IPR010105 TonB-dependent siderophore receptor A388_01996 IPR010917 TonB-dependent receptor, conserved site A388_01996 IPR012910 TonB-dependent receptor, plug A388_01996 IPR036942 A388_01996 A388_01996 IPR037066 A388_01996 A388_01997 IPR005828 General substrate transporter A388_01997 IPR005829 Sugar transporter, conserved site A388_01997 IPR011701 Major facilitator superfamily A388_01997 IPR036259 A388_01997 A388_01998 IPR010376 Domain of unknown function, DUF971 A388_01998 IPR038492 A388_01998 A388_01999 IPR004155 PBS lyase HEAT-like repeat A388_01999 IPR011989 Armadillo-like helical A388_01999 IPR016024 Armadillo-type fold A388_02000 IPR003439 ABC transporter-like A388_02000 IPR003593 AAA+ ATPase domain A388_02000 IPR017871 ABC transporter, conserved site A388_02000 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02001 IPR000515 MetI-like domain A388_02001 IPR035906 A388_02001 A388_02003 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain A388_02004 IPR003953 FAD binding domain A388_02004 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal A388_02004 IPR036188 A388_02004 A388_02004 IPR037099 A388_02004 A388_02005 IPR000524 Transcription regulator HTH, GntR A388_02005 IPR011663 UbiC transcription regulator-associated A388_02005 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain A388_02005 IPR036388 A388_02005 A388_02005 IPR036390 A388_02005 A388_02006 IPR003370 Chromate transporter A388_02006 IPR014047 Chromate transporter, long chain A388_02007 IPR003680 Flavodoxin-like fold A388_02007 IPR023048 NADH-azoreductase, FMN-dependent A388_02007 IPR029039 Flavoprotein-like A388_02008 IPR002577 Helix-turn-helix, HxlR type A388_02008 IPR036388 A388_02008 A388_02008 IPR036390 A388_02008 A388_02009 IPR009057 Homeodomain-like A388_02009 IPR018060 DNA binding HTH domain, AraC-type A388_02009 IPR018062 HTH domain AraC-type, conserved site A388_02010 IPR000620 Drug/metabolite transporter A388_02011 IPR001342 Homoserine dehydrogenase, catalytic A388_02011 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding A388_02011 IPR022697 Homoserine dehydrogenase lacking ACT domain A388_02011 IPR036291 A388_02011 A388_02012 IPR002781 Transmembrane protein TauE like A388_02013 IPR005939 Beta-lactamase hydrolase-like A388_02013 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_02013 IPR029021 Protein-tyrosine phosphatase-like A388_02013 IPR036188 A388_02013 A388_02014 IPR001279 Beta-lactamase-like A388_02014 IPR036866 A388_02014 A388_02015 IPR002078 RNA polymerase sigma factor 54 interaction domain A388_02015 IPR002197 DNA binding HTH domain, Fis-type A388_02015 IPR003593 AAA+ ATPase domain A388_02015 IPR009057 Homeodomain-like A388_02015 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 A388_02015 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 A388_02015 IPR025944 Sigma-54 interaction domain, conserved site A388_02015 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02016 IPR021134 Bestrophin/UPF0187 A388_02017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site A388_02017 IPR011032 GroES (chaperonin 10)-like A388_02017 IPR013149 Alcohol dehydrogenase, C-terminal A388_02017 IPR013154 Alcohol dehydrogenase GroES-like A388_02017 IPR020843 Polyketide synthase, enoylreductase A388_02017 IPR036291 A388_02017 A388_02018 IPR002347 Glucose/ribitol dehydrogenase A388_02018 IPR014007 Acetoin reductase A388_02018 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_02018 IPR036291 A388_02018 A388_02019 IPR001100 A388_02019 A388_02019 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A388_02019 IPR006258 Dihydrolipoamide dehydrogenase A388_02019 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site A388_02019 IPR016156 FAD/NAD-linked reductase, dimerisation domain A388_02019 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_02019 IPR036188 A388_02019 A388_02020 IPR000089 Biotin/lipoyl attachment A388_02020 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain A388_02020 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site A388_02020 IPR004167 E3 binding A388_02020 IPR011053 Single hybrid motif A388_02020 IPR023213 Chloramphenicol acetyltransferase-like domain A388_02020 IPR036625 A388_02020 A388_02021 IPR005475 Transketolase-like, pyrimidine-binding domain A388_02021 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II A388_02021 IPR029061 Thiamin diphosphate-binding fold A388_02021 IPR033248 A388_02021 A388_02022 IPR001017 Dehydrogenase, E1 component A388_02022 IPR029061 Thiamin diphosphate-binding fold A388_02023 IPR003698 Lipoyl synthase A388_02023 IPR006638 Elongator protein 3/MiaB/NifB A388_02023 IPR007197 Radical SAM A388_02023 IPR013785 Aldolase-type TIM barrel A388_02024 IPR029016 GAF domain-like A388_02025 IPR016084 Haem oxygenase-like, multi-helical A388_02026 IPR001584 Integrase, catalytic core A388_02026 IPR012337 Ribonuclease H-like domain A388_02026 IPR025246 Transposase IS30-like HTH domain A388_02026 IPR036397 A388_02026 A388_02027 IPR004305 Thiaminase-2/PQQC A388_02027 IPR016084 Haem oxygenase-like, multi-helical A388_02028 IPR000160 GGDEF domain A388_02028 IPR029787 Nucleotide cyclase A388_02029 IPR000453 Chorismate synthase A388_02029 IPR020541 Chorismate synthase, conserved site A388_02029 IPR035904 A388_02029 A388_02030 IPR002052 DNA methylase, N-6 adenine-specific, conserved site A388_02030 IPR004556 Modification methylase HemK A388_02030 IPR007848 Methyltransferase small domain A388_02030 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase A388_02030 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_02031 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme A388_02031 IPR006653 Tryptophan synthase, beta chain, conserved site A388_02031 IPR006654 Tryptophan synthase, beta chain A388_02031 IPR023026 Tryptophan synthase beta chain/beta chain-like A388_02031 IPR036052 A388_02031 A388_02032 IPR008912 Uncharacterised protein family CoxE-like A388_02033 IPR003593 AAA+ ATPase domain A388_02033 IPR003959 ATPase, AAA-type, core A388_02033 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02035 IPR027354 YcgL domain A388_02035 IPR038068 A388_02035 A388_02039 IPR002121 HRDC domain A388_02039 IPR002562 3'-5' exonuclease domain A388_02039 IPR010997 HRDC-like A388_02039 IPR012337 Ribonuclease H-like domain A388_02039 IPR036397 A388_02039 A388_02040 IPR000093 DNA recombination protein RecR A388_02040 IPR006171 Toprim domain A388_02040 IPR015967 Recombination protein RecR, conserved site A388_02040 IPR023627 Recombination protein RecR A388_02040 IPR023628 Recombination protein RecR, C4-type zinc finger A388_02041 IPR004401 Nucleoid-associated protein YbaB A388_02041 IPR036894 A388_02041 A388_02043 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme A388_02043 IPR006234 O-succinylhomoserine sulfhydrylase A388_02043 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_02043 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_02043 IPR015424 Pyridoxal phosphate-dependent transferase A388_02044 IPR000073 Alpha/beta hydrolase fold-1 A388_02044 IPR029058 Alpha/Beta hydrolase fold A388_02045 IPR013216 Methyltransferase type 11 A388_02045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_02049 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V A388_02049 IPR011057 Mss4-like A388_02050 IPR025582 YARHG domain A388_02051 IPR001310 Histidine triad (HIT) protein A388_02051 IPR036265 A388_02051 A388_02052 IPR023614 Porin domain A388_02053 IPR009282 Protein of unknown function DUF937 A388_02053 IPR027405 YidB-like A388_02055 IPR021246 Protein of unknown function DUF2797 A388_02056 IPR003835 Glycosyl transferase, family 19 A388_02057 IPR012910 TonB-dependent receptor, plug A388_02057 IPR037066 A388_02057 A388_02058 IPR000531 TonB-dependent receptor, beta-barrel A388_02058 IPR010105 TonB-dependent siderophore receptor A388_02058 IPR036942 A388_02058 A388_02058 IPR037066 A388_02058 A388_02060 IPR005625 PepSY-associated TM helix A388_02062 IPR002781 Transmembrane protein TauE like A388_02063 IPR006218 DAHP synthetase I/KDSA A388_02063 IPR006219 DHAP synthase, class 1 A388_02063 IPR013785 Aldolase-type TIM barrel A388_02064 IPR003805 Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase A388_02065 IPR000560 Histidine phosphatase superfamily, clade-2 A388_02065 IPR029033 Histidine phosphatase superfamily A388_02066 IPR013078 Histidine phosphatase superfamily, clade-1 A388_02066 IPR029033 Histidine phosphatase superfamily A388_02067 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like A388_02067 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic A388_02067 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal A388_02067 IPR036087 A388_02067 A388_02068 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase A388_02068 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02069 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase A388_02070 IPR006439 HAD hydrolase, subfamily IA A388_02070 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_02070 IPR013118 Mannitol dehydrogenase, C-terminal A388_02070 IPR013328 Dehydrogenase, multihelical A388_02070 IPR023198 Phosphoglycolate phosphatase, domain 2 A388_02070 IPR023214 HAD-like domain A388_02070 IPR036412 A388_02070 A388_02071 IPR016181 Acyl-CoA N-acyltransferase A388_02071 IPR019432 Siderophore biosynthesis protein, conserved domain A388_02073 IPR005625 PepSY-associated TM helix A388_02075 IPR000531 TonB-dependent receptor, beta-barrel A388_02075 IPR012910 TonB-dependent receptor, plug A388_02075 IPR036942 A388_02075 A388_02075 IPR037066 A388_02075 A388_02076 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase A388_02076 IPR036704 A388_02076 A388_02077 IPR024726 Ferric iron reductase, C-terminal A388_02078 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal A388_02078 IPR022770 Ferric iron reductase FhuF domain A388_02079 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal A388_02079 IPR022770 Ferric iron reductase FhuF domain A388_02080 IPR004638 Drug resistance transporter EmrB/QacA subfamily A388_02080 IPR011701 Major facilitator superfamily A388_02080 IPR036259 A388_02080 A388_02081 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase A388_02081 IPR036188 A388_02081 A388_02082 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal A388_02082 IPR022770 Ferric iron reductase FhuF domain A388_02083 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC A388_02083 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain A388_02083 IPR036754 A388_02083 A388_02085 IPR004147 UbiB domain A388_02085 IPR011009 Protein kinase-like domain A388_02086 IPR006089 Acyl-CoA dehydrogenase, conserved site A388_02086 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_02086 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_02086 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_02086 IPR036250 A388_02086 A388_02086 IPR037069 A388_02086 A388_02087 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_02087 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_02087 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_02087 IPR036250 A388_02087 A388_02087 IPR037069 A388_02087 A388_02088 IPR005804 Fatty acid desaturase, type 1 A388_02089 IPR009057 Homeodomain-like A388_02089 IPR011051 RmlC-like cupin domain A388_02089 IPR018060 DNA binding HTH domain, AraC-type A388_02089 IPR020449 Transcription regulator HTH, AraC- type A388_02089 IPR032783 A388_02089 A388_02090 IPR027304 Trigger factor/SurA domain A388_02091 IPR000119 Histone-like bacterial DNA-binding protein A388_02091 IPR010992 Integration host factor (IHF)-like DNA-binding domain A388_02091 IPR020816 Histone-like DNA-binding protein, conserved site A388_02092 IPR008769 Poly granule associated A388_02094 IPR000944 Transcription regulator Rrf2-like A388_02094 IPR030489 A388_02094 A388_02094 IPR036388 A388_02094 A388_02094 IPR036390 A388_02094 A388_02095 IPR000192 Aminotransferase class V domain A388_02095 IPR010240 Cysteine desulfurase A388_02095 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_02095 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_02095 IPR015424 Pyridoxal phosphate-dependent transferase A388_02095 IPR016454 Cysteine desulfurase, NifS A388_02095 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site A388_02096 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal A388_02096 IPR011339 ISC system FeS cluster assembly, IscU scaffold A388_02097 IPR000361 FeS cluster biogenesis A388_02097 IPR011302 ISC system FeS cluster assembly, IscA scaffold A388_02097 IPR016092 FeS cluster insertion protein A388_02097 IPR017870 FeS cluster insertion, C-terminal, conserved site A388_02097 IPR035903 A388_02097 A388_02098 IPR001623 DnaJ domain A388_02098 IPR004640 Co-chaperone Hsc20 A388_02098 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain A388_02098 IPR036386 A388_02098 A388_02098 IPR036869 A388_02098 A388_02099 IPR010236 ISC system FeS cluster assembly, HscA chaperone A388_02099 IPR013126 Heat shock protein 70 family A388_02099 IPR018181 Heat shock protein 70, conserved site A388_02099 IPR029047 Heat shock protein 70kD, peptide-binding domain A388_02099 IPR029048 Heat shock protein 70kD, C-terminal domain A388_02100 IPR001041 2Fe-2S ferredoxin-type domain A388_02100 IPR001055 Adrenodoxin A388_02100 IPR011536 Ferredoxin, 2Fe-2S type A388_02100 IPR012675 Beta-grasp domain A388_02100 IPR018298 Adrenodoxin, iron-sulphur binding site A388_02100 IPR036010 A388_02100 A388_02101 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase A388_02101 IPR029787 Nucleotide cyclase A388_02102 IPR001310 Histidine triad (HIT) protein A388_02102 IPR026026 Histidine triad hydrolase, Hint-type A388_02102 IPR036265 A388_02102 A388_02103 IPR001650 Helicase, C-terminal A388_02103 IPR003711 CarD-like/TRCF domain A388_02103 IPR004576 Transcription-repair coupling factor A388_02103 IPR005118 Transcription-repair-coupling factor, C-terminal domain A388_02103 IPR011545 DEAD/DEAH box helicase domain A388_02103 IPR014001 Helicase, superfamily 1/2, ATP-binding domain A388_02103 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02103 IPR036101 A388_02103 A388_02103 IPR037235 A388_02103 A388_02105 IPR006314 Dyp-type peroxidase A388_02105 IPR011008 Dimeric alpha-beta barrel A388_02106 IPR004045 Glutathione S-transferase, N-terminal A388_02106 IPR036249 A388_02106 A388_02107 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase A388_02107 IPR010203 Regulator of ribonuclease activity A A388_02107 IPR036704 A388_02107 A388_02108 IPR000534 Semialdehyde dehydrogenase, NAD-binding A388_02108 IPR036291 A388_02108 A388_02109 IPR002583 Ribosomal protein S20 A388_02109 IPR036510 A388_02109 A388_02110 IPR013078 Histidine phosphatase superfamily, clade-1 A388_02110 IPR029033 Histidine phosphatase superfamily A388_02111 IPR000760 Inositol monophosphatase A388_02111 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial A388_02111 IPR020583 Inositol monophosphatase, metal-binding site A388_02113 IPR003738 Protein of unknown function DUF159 A388_02113 IPR036590 A388_02113 A388_02114 IPR003439 ABC transporter-like A388_02114 IPR003593 AAA+ ATPase domain A388_02114 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal A388_02114 IPR017871 ABC transporter, conserved site A388_02114 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02115 IPR000515 MetI-like domain A388_02115 IPR025966 Oligopeptide transport permease C-like, N-terminal domain A388_02115 IPR035906 A388_02115 A388_02116 IPR000515 MetI-like domain A388_02116 IPR035906 A388_02116 A388_02117 IPR001567 Peptidase M3A/M3B A388_02117 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 A388_02118 IPR000914 Bacterial extracellular solute-binding protein, family 5 A388_02118 IPR030678 A388_02118 A388_02119 IPR000914 Bacterial extracellular solute-binding protein, family 5 A388_02119 IPR030678 A388_02119 A388_02121 IPR000531 TonB-dependent receptor, beta-barrel A388_02121 IPR012910 TonB-dependent receptor, plug A388_02121 IPR037066 A388_02121 A388_02122 IPR003538 Gram-negative bacterial TonB protein A388_02122 IPR006260 TonB, C-terminal A388_02122 IPR037682 A388_02122 A388_02123 IPR002898 MotA/TolQ/ExbB proton channel A388_02124 IPR003400 Biopolymer transport protein ExbD/TolR A388_02125 IPR003400 Biopolymer transport protein ExbD/TolR A388_02126 IPR001465 Malate synthase A388_02126 IPR006253 Malate synthase G A388_02126 IPR011076 Malate synthase-like A388_02126 IPR023310 Malate synthase G, beta sub-domain A388_02127 IPR005654 ATPase, AFG1-like A388_02127 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02127 IPR030870 A388_02127 A388_02128 IPR009057 Homeodomain-like A388_02128 IPR018060 DNA binding HTH domain, AraC-type A388_02128 IPR032687 A388_02128 A388_02129 IPR020946 Flavin monooxygenase-like A388_02129 IPR036188 A388_02129 A388_02130 IPR005642 Protein of unknown function DUF340, prokaryotic membrane A388_02131 IPR001754 Orotidine 5'-phosphate decarboxylase domain A388_02131 IPR011060 Ribulose-phosphate binding barrel A388_02131 IPR013785 Aldolase-type TIM barrel A388_02131 IPR014732 Orotidine 5'-phosphate decarboxylase A388_02131 IPR018089 Orotidine 5'-phosphate decarboxylase, active site A388_02132 IPR010445 Protein of unknown function DUF1049 A388_02133 IPR000119 Histone-like bacterial DNA-binding protein A388_02133 IPR005685 Integration host factor, beta subunit A388_02133 IPR010992 Integration host factor (IHF)-like DNA-binding domain A388_02133 IPR020816 Histone-like DNA-binding protein, conserved site A388_02134 IPR000110 Ribosomal protein S1 A388_02134 IPR003029 Ribosomal protein S1, RNA-binding domain A388_02134 IPR012340 Nucleic acid-binding, OB-fold A388_02134 IPR022967 RNA-binding domain, S1 A388_02135 IPR003136 Cytidylate kinase A388_02135 IPR011994 Cytidylate kinase domain A388_02135 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02136 IPR019587 Polyketide cyclase/dehydrase A388_02136 IPR023393 START-like domain A388_02137 IPR016192 APOBEC/CMP deaminase, zinc-binding A388_02137 IPR016193 Cytidine deaminase-like A388_02137 IPR028883 tRNA-specific adenosine deaminase A388_02138 IPR029045 ClpP/crotonase-like domain A388_02138 IPR032259 A388_02138 A388_02139 IPR002043 Uracil-DNA glycosylase A388_02139 IPR005122 Uracil-DNA glycosylase-like A388_02139 IPR018085 Uracil-DNA glycosylase, active site A388_02139 IPR036895 A388_02139 A388_02140 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein A388_02140 IPR038418 A388_02140 A388_02141 IPR005628 General secretion pathway protein K A388_02141 IPR038072 A388_02141 A388_02142 IPR010055 Type II secretion system protein J A388_02142 IPR012902 Prokaryotic N-terminal methylation site A388_02143 IPR003413 Type II secretion system protein I domain A388_02143 IPR010052 Type II secretion system protein I A388_02143 IPR012902 Prokaryotic N-terminal methylation site A388_02144 IPR002416 Type II secretion system protein H A388_02144 IPR012902 Prokaryotic N-terminal methylation site A388_02145 IPR001647 DNA-binding HTH domain, TetR-type A388_02145 IPR009057 Homeodomain-like A388_02146 IPR001130 TatD family A388_02146 IPR015991 Uncharacterised deoxyribonuclease TatD-type A388_02146 IPR018228 Deoxyribonuclease, TatD-related, conserved site A388_02146 IPR032466 A388_02146 A388_02147 IPR009875 PilZ domain A388_02148 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02149 IPR003329 Acylneuraminate cytidylyltransferase A388_02149 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase A388_02149 IPR029044 Nucleotide-diphospho-sugar transferases A388_02150 IPR003758 Tetraacyldisaccharide 4'-kinase A388_02150 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02151 IPR003439 ABC transporter-like A388_02151 IPR003593 AAA+ ATPase domain A388_02151 IPR011527 ABC transporter type 1, transmembrane domain A388_02151 IPR011917 ABC transporter, lipid A export, MsbA A388_02151 IPR017871 ABC transporter, conserved site A388_02151 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02151 IPR036640 A388_02151 A388_02152 IPR003400 Biopolymer transport protein ExbD/TolR A388_02153 IPR002898 MotA/TolQ/ExbB proton channel A388_02154 IPR003115 ParB/Sulfiredoxin A388_02154 IPR004437 ParB/RepB/Spo0J partition protein family A388_02154 IPR036086 A388_02154 A388_02155 IPR025669 AAA domain A388_02155 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02156 IPR003682 rRNA small subunit methyltransferase G A388_02156 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_02157 IPR005835 Nucleotidyl transferase A388_02157 IPR029044 Nucleotide-diphospho-sugar transferases A388_02158 IPR002575 Aminoglycoside phosphotransferase A388_02158 IPR011009 Protein kinase-like domain A388_02159 IPR005653 Organic solvent tolerance-like, N-terminal A388_02159 IPR007543 Organic solvent tolerance protein, C-terminal A388_02159 IPR020889 Lipopolysaccharide assembly, LptD A388_02160 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type A388_02160 IPR015391 SurA N-terminal A388_02160 IPR023034 Peptidyl-prolyl isomerase SurA A388_02160 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site A388_02160 IPR027304 Trigger factor/SurA domain A388_02161 IPR000771 Ketose-bisphosphate aldolase, class-II A388_02161 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype A388_02161 IPR013785 Aldolase-type TIM barrel A388_02163 IPR001576 Phosphoglycerate kinase A388_02163 IPR015824 Phosphoglycerate kinase, N-terminal A388_02163 IPR015911 Phosphoglycerate kinase, conserved site A388_02163 IPR036043 A388_02163 A388_02164 IPR018714 Protein of unknown function DUF2237 A388_02165 IPR003697 Maf-like protein A388_02165 IPR029001 Inosine triphosphate pyrophosphatase-like A388_02166 IPR003347 JmjC domain A388_02167 IPR001647 DNA-binding HTH domain, TetR-type A388_02167 IPR009057 Homeodomain-like A388_02167 IPR036271 A388_02167 A388_02168 IPR001845 HTH ArsR-type DNA-binding domain A388_02168 IPR036388 A388_02168 A388_02168 IPR036390 A388_02168 A388_02169 IPR001991 Sodium:dicarboxylate symporter A388_02169 IPR023025 Serine/threonine transporter SstT A388_02169 IPR036458 A388_02169 A388_02170 IPR010699 Protein of unknown function DUF1275 A388_02171 IPR018636 Protein of unknown function DUF2058 A388_02172 IPR003439 ABC transporter-like A388_02172 IPR003593 AAA+ ATPase domain A388_02172 IPR011527 ABC transporter type 1, transmembrane domain A388_02172 IPR017871 ABC transporter, conserved site A388_02172 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02172 IPR036640 A388_02172 A388_02173 IPR002539 MaoC-like domain A388_02173 IPR029069 HotDog domain A388_02174 IPR009057 Homeodomain-like A388_02174 IPR018060 DNA binding HTH domain, AraC-type A388_02174 IPR020449 Transcription regulator HTH, AraC- type A388_02174 IPR032687 A388_02174 A388_02175 IPR002930 Glycine cleavage system H-protein A388_02175 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site A388_02175 IPR011053 Single hybrid motif A388_02175 IPR017453 Glycine cleavage system H-protein, subgroup A388_02175 IPR033753 A388_02175 A388_02176 IPR003000 Sirtuin family A388_02176 IPR026591 Sirtuin family, catalytic core small domain A388_02176 IPR029035 DHS-like NAD/FAD-binding domain A388_02177 IPR001734 Sodium/solute symporter A388_02177 IPR011851 Sodium/proline symporter A388_02177 IPR018212 Sodium/solute symporter, conserved site A388_02177 IPR038377 A388_02177 A388_02178 IPR000485 AsnC-type HTH domain A388_02178 IPR011008 Dimeric alpha-beta barrel A388_02178 IPR019887 Transcription regulator AsnC-type, C-terminal A388_02178 IPR019888 Transcription regulator AsnC-type A388_02178 IPR036388 A388_02178 A388_02178 IPR036390 A388_02178 A388_02179 IPR002872 Proline dehydrogenase domain A388_02179 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 A388_02179 IPR015590 Aldehyde dehydrogenase domain A388_02179 IPR016160 Aldehyde dehydrogenase, cysteine active site A388_02179 IPR016161 Aldehyde/histidinol dehydrogenase A388_02179 IPR016162 Aldehyde dehydrogenase, N-terminal A388_02179 IPR016163 Aldehyde dehydrogenase, C-terminal A388_02179 IPR024082 Proline dehydrogenase PutA, domain II A388_02179 IPR024089 Proline dehydrogenase PutA, domain I/II A388_02179 IPR025703 Bifunctional protein PutA A388_02179 IPR029041 FAD-linked oxidoreductase-like A388_02180 IPR007344 GrpB/Dephospho-CoA kinase A388_02181 IPR010280 (Uracil-5)-methyltransferase family A388_02181 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA A388_02181 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_02181 IPR030390 A388_02181 A388_02181 IPR030391 A388_02181 A388_02183 IPR018711 Domain of unknown function DUF2233 A388_02184 IPR007053 LRAT-like domain A388_02185 IPR007372 Lipid/polyisoprenoid-binding, YceI-like A388_02185 IPR036761 A388_02185 A388_02186 IPR003718 OsmC/Ohr family A388_02186 IPR015946 K homology domain-like, alpha/beta A388_02186 IPR036102 A388_02186 A388_02187 IPR005474 Transketolase, N-terminal A388_02187 IPR005475 Transketolase-like, pyrimidine-binding domain A388_02187 IPR005478 Transketolase, bacterial-like A388_02187 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II A388_02187 IPR020826 Transketolase binding site A388_02187 IPR029061 Thiamin diphosphate-binding fold A388_02187 IPR033248 A388_02187 A388_02188 IPR002133 S-adenosylmethionine synthetase A388_02188 IPR022628 S-adenosylmethionine synthetase, N-terminal A388_02188 IPR022629 S-adenosylmethionine synthetase, central domain A388_02188 IPR022630 S-adenosylmethionine synthetase, C-terminal A388_02188 IPR022631 S-adenosylmethionine synthetase, conserved site A388_02188 IPR022636 S-adenosylmethionine synthetase superfamily A388_02191 IPR007313 FxsA cytoplasmic membrane protein A388_02192 IPR001460 Penicillin-binding protein, transpeptidase A388_02192 IPR012338 Beta-lactamase/transpeptidase-like A388_02193 IPR016181 Acyl-CoA N-acyltransferase A388_02194 IPR001387 Cro/C1-type helix-turn-helix domain A388_02194 IPR010982 Lambda repressor-like, DNA-binding domain A388_02194 IPR011051 RmlC-like cupin domain A388_02194 IPR014710 RmlC-like jelly roll fold A388_02195 IPR002176 Crossover junction endodeoxyribonuclease RuvC A388_02195 IPR012337 Ribonuclease H-like domain A388_02195 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site A388_02195 IPR036397 A388_02195 A388_02196 IPR000631 YjeF C-terminal domain A388_02196 IPR004443 YjeF N-terminal domain A388_02196 IPR017953 Carbohydrate kinase, predicted, conserved site A388_02196 IPR029056 Ribokinase-like A388_02196 IPR030677 A388_02196 A388_02196 IPR036652 A388_02196 A388_02197 IPR004453 Epoxyqueuosine reductase QueG A388_02197 IPR009051 Alpha-helical ferredoxin A388_02197 IPR013542 Domain of unknown function DUF1730 A388_02197 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site A388_02198 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB A388_02198 IPR006638 Elongator protein 3/MiaB/NifB A388_02198 IPR007197 Radical SAM A388_02198 IPR010722 Biotin and thiamin synthesis-associated domain A388_02198 IPR013785 Aldolase-type TIM barrel A388_02198 IPR024177 Biotin synthase A388_02201 IPR008966 Adhesion domain A388_02201 IPR036937 A388_02201 A388_02201 IPR039458 A388_02201 A388_02203 IPR001584 Integrase, catalytic core A388_02203 IPR012337 Ribonuclease H-like domain A388_02203 IPR025246 Transposase IS30-like HTH domain A388_02203 IPR036397 A388_02203 A388_02204 IPR002575 Aminoglycoside phosphotransferase A388_02204 IPR011009 Protein kinase-like domain A388_02204 IPR024165 Aminoglycoside 3-phosphotransferase A388_02205 IPR001584 Integrase, catalytic core A388_02205 IPR012337 Ribonuclease H-like domain A388_02205 IPR025246 Transposase IS30-like HTH domain A388_02205 IPR036397 A388_02205 A388_02206 IPR001829 Pili assembly chaperone, bacterial A388_02206 IPR008962 PapD-like A388_02206 IPR013783 Immunoglobulin-like fold A388_02206 IPR016147 PapD, N-terminal, bacterial A388_02206 IPR016148 Pili assembly chaperone, C-terminal domain A388_02206 IPR018046 Pili assembly chaperone, conserved site A388_02206 IPR036316 A388_02206 A388_02207 IPR000015 Outer membrane usher protein A388_02207 IPR025885 PapC, N-terminal domain A388_02207 IPR025949 PapC-like, C-terminal domain A388_02207 IPR037224 A388_02207 A388_02208 IPR000259 Fimbrial-type adhesion domain A388_02208 IPR008966 Adhesion domain A388_02208 IPR036937 A388_02208 A388_02210 IPR000847 Transcription regulator HTH, LysR A388_02210 IPR005119 LysR, substrate-binding A388_02210 IPR036388 A388_02210 A388_02210 IPR036390 A388_02210 A388_02211 IPR000620 Drug/metabolite transporter A388_02213 IPR001584 Integrase, catalytic core A388_02213 IPR012337 Ribonuclease H-like domain A388_02213 IPR036397 A388_02213 A388_02214 IPR002514 Transposase IS3/IS911family A388_02214 IPR009057 Homeodomain-like A388_02215 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin A388_02215 IPR026030 Purine-cytosine permease A388_02215 IPR038271 A388_02215 A388_02216 IPR007896 Transmembrane pair, bacterial A388_02217 IPR000847 Transcription regulator HTH, LysR A388_02217 IPR005119 LysR, substrate-binding A388_02217 IPR036388 A388_02217 A388_02217 IPR036390 A388_02217 A388_02219 IPR002104 Integrase, catalytic A388_02219 IPR010998 Integrase, Lambda-type, N-terminal A388_02219 IPR011010 DNA breaking-rejoining enzyme, catalytic core A388_02219 IPR013762 Integrase-like, catalytic core A388_02221 IPR016084 Haem oxygenase-like, multi-helical A388_02222 IPR001584 Integrase, catalytic core A388_02222 IPR012337 Ribonuclease H-like domain A388_02222 IPR025246 Transposase IS30-like HTH domain A388_02222 IPR036397 A388_02222 A388_02223 IPR001647 DNA-binding HTH domain, TetR-type A388_02223 IPR009057 Homeodomain-like A388_02223 IPR036271 A388_02223 A388_02224 IPR002123 Phospholipid/glycerol acyltransferase A388_02225 IPR002876 Transcriptional regulator TACO1-like A388_02225 IPR017856 Integrase, N-terminal zinc-binding domain-like A388_02225 IPR026564 Transcriptional regulator TACO1-like, domain 3 A388_02225 IPR029072 YebC-like A388_02226 IPR011008 Dimeric alpha-beta barrel A388_02226 IPR019887 Transcription regulator AsnC-type, C-terminal A388_02226 IPR019888 Transcription regulator AsnC-type A388_02226 IPR036388 A388_02226 A388_02226 IPR036390 A388_02226 A388_02228 IPR003439 ABC transporter-like A388_02228 IPR003593 AAA+ ATPase domain A388_02228 IPR017871 ABC transporter, conserved site A388_02228 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02228 IPR030679 A388_02228 A388_02229 IPR000515 MetI-like domain A388_02229 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family A388_02229 IPR035906 A388_02229 A388_02230 IPR000515 MetI-like domain A388_02230 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family A388_02230 IPR035906 A388_02230 A388_02231 IPR001638 Extracellular solute-binding protein, family 3 A388_02232 IPR004045 Glutathione S-transferase, N-terminal A388_02232 IPR004046 Glutathione S-transferase, C-terminal A388_02232 IPR036249 A388_02232 A388_02232 IPR036282 A388_02232 A388_02233 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_02233 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_02233 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain A388_02233 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_02233 IPR023922 Sulphate-starvation-induced SfnB A388_02233 IPR036250 A388_02233 A388_02233 IPR037069 A388_02233 A388_02234 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_02234 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain A388_02234 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_02234 IPR023922 Sulphate-starvation-induced SfnB A388_02234 IPR036250 A388_02234 A388_02234 IPR037069 A388_02234 A388_02235 IPR011251 Luciferase-like domain A388_02235 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A A388_02235 IPR036661 A388_02235 A388_02236 IPR004872 Lipoprotein NlpA family A388_02237 IPR004872 Lipoprotein NlpA family A388_02238 IPR003439 ABC transporter-like A388_02238 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02239 IPR025668 Transposase DDE domain A388_02240 IPR003439 ABC transporter-like A388_02240 IPR017871 ABC transporter, conserved site A388_02240 IPR018449 NIL domain A388_02240 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02241 IPR000515 MetI-like domain A388_02241 IPR035906 A388_02241 A388_02242 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 A388_02242 IPR006073 GTP binding domain A388_02242 IPR012675 Beta-grasp domain A388_02242 IPR012676 TGS-like A388_02242 IPR013029 Domain of unknown function DUF933 A388_02242 IPR023192 TGS-like domain A388_02242 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02243 IPR009305 Protein of unknown function DUF962 A388_02244 IPR000595 Cyclic nucleotide-binding domain A388_02244 IPR012318 Helix-turn-helix motif, Crp-type A388_02244 IPR014710 RmlC-like jelly roll fold A388_02244 IPR018490 Cyclic nucleotide-binding-like A388_02244 IPR036388 A388_02244 A388_02244 IPR036390 A388_02244 A388_02247 IPR011606 Branched-chain amino acid transport, permease A388_02248 IPR008407 Branched-chain amino acid transport, AzlD A388_02249 IPR014347 Tautomerase/MIF superfamily A388_02249 IPR037479 A388_02249 A388_02250 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type A388_02250 IPR005862 Phosphoribosylglycinamide formyltransferase 2 A388_02250 IPR011054 Rudiment single hybrid motif A388_02250 IPR013815 ATP-grasp fold, subdomain 1 A388_02250 IPR016185 Pre-ATP-grasp domain A388_02251 IPR002934 Nucleotidyl transferase domain A388_02251 IPR003607 HD/PDEase domain A388_02251 IPR006674 HD domain A388_02251 IPR010043 Protein-PII uridylyltransferase A388_02251 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase A388_02252 IPR004839 Aminotransferase, class I/classII A388_02252 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_02252 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_02252 IPR015424 Pyridoxal phosphate-dependent transferase A388_02252 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria A388_02253 IPR001123 Lysine-type exporter protein (LYSE/YGGA) A388_02254 IPR003313 AraC-type arabinose-binding/dimerisation domain A388_02254 IPR009057 Homeodomain-like A388_02254 IPR018060 DNA binding HTH domain, AraC-type A388_02254 IPR018062 HTH domain AraC-type, conserved site A388_02254 IPR020449 Transcription regulator HTH, AraC- type A388_02254 IPR037923 A388_02254 A388_02255 IPR000889 Glutathione peroxidase A388_02255 IPR029759 Glutathione peroxidase active site A388_02255 IPR029760 Glutathione peroxidase conserved site A388_02255 IPR036249 A388_02255 A388_02256 IPR002579 Peptide methionine sulphoxide reductase MrsB A388_02256 IPR011057 Mss4-like A388_02257 IPR004839 Aminotransferase, class I/classII A388_02257 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_02257 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_02257 IPR015424 Pyridoxal phosphate-dependent transferase A388_02258 IPR001991 Sodium:dicarboxylate symporter A388_02258 IPR036458 A388_02258 A388_02259 IPR004550 L-asparaginase, type II A388_02259 IPR006034 Asparaginase/glutaminase A388_02259 IPR020827 Asparaginase/glutaminase, active site 1 A388_02259 IPR027473 L-asparaginase, C-terminal domain A388_02259 IPR027474 L-asparaginase, N-terminal A388_02259 IPR027475 Asparaginase/glutaminase, active site 2 A388_02259 IPR036152 A388_02259 A388_02259 IPR037152 A388_02259 A388_02260 IPR003141 Polymerase/histidinol phosphatase, N-terminal A388_02260 IPR004013 PHP, C-terminal A388_02260 IPR004805 DNA polymerase III, alpha subunit A388_02260 IPR011708 Bacterial DNA polymerase III, alpha subunit A388_02260 IPR016195 Polymerase/histidinol phosphatase-like A388_02260 IPR029460 DNA polymerase, helix-hairpin-helix motif A388_02261 IPR001537 tRNA/rRNA methyltransferase, SpoU type A388_02261 IPR004384 RNA methyltransferase TrmH, group 1 A388_02261 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal A388_02261 IPR029028 Alpha/beta knot methyltransferases A388_02262 IPR001451 Bacterial transferase hexapeptide repeat A388_02262 IPR005881 Serine O-acetyltransferase A388_02262 IPR010493 Serine acetyltransferase, N-terminal A388_02262 IPR011004 Trimeric LpxA-like A388_02263 IPR011990 Tetratricopeptide-like helical domain A388_02264 IPR029058 Alpha/Beta hydrolase fold A388_02265 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II A388_02265 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site A388_02265 IPR012081 Alkyl hydroperoxide reductase subunit F A388_02265 IPR012336 Thioredoxin-like fold A388_02265 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_02265 IPR036188 A388_02265 A388_02265 IPR036249 A388_02265 A388_02266 IPR003370 Chromate transporter A388_02266 IPR018181 Heat shock protein 70, conserved site A388_02267 IPR003370 Chromate transporter A388_02268 IPR000847 Transcription regulator HTH, LysR A388_02268 IPR005119 LysR, substrate-binding A388_02268 IPR036388 A388_02268 A388_02268 IPR036390 A388_02268 A388_02269 IPR002657 Bile acid:sodium symporter A388_02269 IPR004706 Arsenical-resistance protein ACR3 A388_02269 IPR038770 A388_02269 A388_02270 IPR001845 HTH ArsR-type DNA-binding domain A388_02270 IPR036388 A388_02270 A388_02270 IPR036390 A388_02270 A388_02271 IPR006659 Arsenate reductase A388_02271 IPR006660 Arsenate reductase-like A388_02271 IPR036249 A388_02271 A388_02272 IPR009872 Protein of unknown function DUF1427 A388_02272 IPR020017 XapX domain A388_02273 IPR011059 Metal-dependent hydrolase, composite domain A388_02273 IPR013108 Amidohydrolase 3 A388_02273 IPR032466 A388_02273 A388_02274 IPR000868 Isochorismatase-like A388_02274 IPR036380 A388_02274 A388_02275 IPR000847 Transcription regulator HTH, LysR A388_02275 IPR005119 LysR, substrate-binding A388_02275 IPR036388 A388_02275 A388_02275 IPR036390 A388_02275 A388_02276 IPR000524 Transcription regulator HTH, GntR A388_02276 IPR008920 Transcription regulator FadR/GntR, C-terminal A388_02276 IPR011711 GntR, C-terminal A388_02276 IPR036388 A388_02276 A388_02276 IPR036390 A388_02276 A388_02277 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin A388_02277 IPR038271 A388_02277 A388_02278 IPR015942 Asp/Glu/hydantoin racemase A388_02279 IPR003819 Taurine catabolism dioxygenase TauD/TfdA A388_02280 IPR000515 MetI-like domain A388_02280 IPR035906 A388_02280 A388_02281 IPR003439 ABC transporter-like A388_02281 IPR003593 AAA+ ATPase domain A388_02281 IPR017871 ABC transporter, conserved site A388_02281 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02282 IPR001638 Extracellular solute-binding protein, family 3 A388_02282 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain A388_02282 IPR010068 Taurine ABC transporter, periplasmic binding protein TauA A388_02283 IPR036709 A388_02283 A388_02284 IPR012337 Ribonuclease H-like domain A388_02284 IPR032874 A388_02284 A388_02285 IPR005828 General substrate transporter A388_02285 IPR036259 A388_02285 A388_02286 IPR011251 Luciferase-like domain A388_02286 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A A388_02286 IPR036661 A388_02286 A388_02287 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_02287 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain A388_02287 IPR036250 A388_02287 A388_02287 IPR037069 A388_02287 A388_02289 IPR002585 Cytochrome d ubiquinol oxidase, subunit I A388_02290 IPR003317 Cytochrome d ubiquinol oxidase, subunit II A388_02292 IPR000524 Transcription regulator HTH, GntR A388_02292 IPR004839 Aminotransferase, class I/classII A388_02292 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_02292 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_02292 IPR015424 Pyridoxal phosphate-dependent transferase A388_02292 IPR036388 A388_02292 A388_02292 IPR036390 A388_02292 A388_02293 IPR000847 Transcription regulator HTH, LysR A388_02293 IPR005119 LysR, substrate-binding A388_02293 IPR036388 A388_02293 A388_02293 IPR036390 A388_02293 A388_02294 IPR004691 Malonate/sodium symporter MadM subunit A388_02294 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal A388_02295 IPR004690 Malonate transporter MadL subunit A388_02296 IPR001227 Acyl transferase domain A388_02296 IPR014043 Acyl transferase A388_02296 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase A388_02296 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding A388_02296 IPR017554 Malonate decarboxylase, McdH subunit A388_02296 IPR020801 Polyketide synthase, acyl transferase domain A388_02296 IPR024925 Malonyl CoA-acyl carrier protein transacylase A388_02297 IPR017557 Phosphoribosyl-dephospho-CoA transferase A388_02298 IPR009648 Malonate decarboxylase gamma subunit A388_02298 IPR029045 ClpP/crotonase-like domain A388_02299 IPR017556 Malonate decarboxylase, beta subunit A388_02299 IPR029045 ClpP/crotonase-like domain A388_02299 IPR034733 A388_02299 A388_02300 IPR009662 Malonate decarboxylase delta subunit A388_02300 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein A388_02301 IPR002736 Triphosphoribosyl-dephospho-CoA protein A388_02301 IPR017555 Triphosphoribosyl-dephospho-CoA synthase A388_02302 IPR005777 Malonate decarboxylase, alpha subunit A388_02302 IPR037171 A388_02302 A388_02303 IPR011701 Major facilitator superfamily A388_02303 IPR036259 A388_02303 A388_02304 IPR000182 GNAT domain A388_02304 IPR016181 Acyl-CoA N-acyltransferase A388_02305 IPR007396 Transcriptional regulator PAI 2-type A388_02305 IPR012349 FMN-binding split barrel A388_02306 IPR000524 Transcription regulator HTH, GntR A388_02306 IPR004839 Aminotransferase, class I/classII A388_02306 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_02306 IPR015424 Pyridoxal phosphate-dependent transferase A388_02306 IPR036388 A388_02306 A388_02306 IPR036390 A388_02306 A388_02307 IPR007300 CidB/LrgB family A388_02308 IPR005538 LrgA/CidA family A388_02309 IPR000847 Transcription regulator HTH, LysR A388_02309 IPR005119 LysR, substrate-binding A388_02309 IPR036388 A388_02309 A388_02309 IPR036390 A388_02309 A388_02310 IPR004045 Glutathione S-transferase, N-terminal A388_02310 IPR034338 A388_02310 A388_02310 IPR036249 A388_02310 A388_02310 IPR036282 A388_02310 A388_02311 IPR004045 Glutathione S-transferase, N-terminal A388_02311 IPR004046 Glutathione S-transferase, C-terminal A388_02311 IPR036249 A388_02311 A388_02311 IPR036282 A388_02311 A388_02312 IPR000847 Transcription regulator HTH, LysR A388_02312 IPR005119 LysR, substrate-binding A388_02312 IPR036388 A388_02312 A388_02312 IPR036390 A388_02312 A388_02313 IPR002347 Glucose/ribitol dehydrogenase A388_02313 IPR036291 A388_02313 A388_02314 IPR001763 Rhodanese-like domain A388_02314 IPR036873 A388_02314 A388_02315 IPR001451 Bacterial transferase hexapeptide repeat A388_02315 IPR005881 Serine O-acetyltransferase A388_02315 IPR010493 Serine acetyltransferase, N-terminal A388_02315 IPR011004 Trimeric LpxA-like A388_02317 IPR000192 Aminotransferase class V domain A388_02317 IPR010970 Cysteine desulfurase, SufS A388_02317 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_02317 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_02317 IPR015424 Pyridoxal phosphate-dependent transferase A388_02317 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site A388_02318 IPR001123 Lysine-type exporter protein (LYSE/YGGA) A388_02319 IPR000847 Transcription regulator HTH, LysR A388_02319 IPR005119 LysR, substrate-binding A388_02319 IPR036388 A388_02319 A388_02319 IPR036390 A388_02319 A388_02320 IPR001638 Extracellular solute-binding protein, family 3 A388_02320 IPR018313 Extracellular solute-binding protein, family 3, conserved site A388_02321 IPR001638 Extracellular solute-binding protein, family 3 A388_02322 IPR003439 ABC transporter-like A388_02322 IPR003593 AAA+ ATPase domain A388_02322 IPR017871 ABC transporter, conserved site A388_02322 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02322 IPR030679 A388_02322 A388_02323 IPR000515 MetI-like domain A388_02323 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family A388_02323 IPR035906 A388_02323 A388_02324 IPR000515 MetI-like domain A388_02324 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family A388_02324 IPR035906 A388_02324 A388_02325 IPR016181 Acyl-CoA N-acyltransferase A388_02325 IPR031165 A388_02325 A388_02326 IPR000792 Transcription regulator LuxR, C-terminal A388_02326 IPR001789 Signal transduction response regulator, receiver domain A388_02326 IPR011006 CheY-like superfamily A388_02326 IPR016032 Signal transduction response regulator, C-terminal effector A388_02326 IPR036388 A388_02326 A388_02327 IPR001789 Signal transduction response regulator, receiver domain A388_02327 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_02327 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain A388_02327 IPR004358 Signal transduction histidine kinase-related protein, C-terminal A388_02327 IPR011006 CheY-like superfamily A388_02327 IPR036097 A388_02327 A388_02327 IPR036890 A388_02327 A388_02327 IPR038271 A388_02327 A388_02328 IPR038271 A388_02328 A388_02329 IPR000485 AsnC-type HTH domain A388_02329 IPR011008 Dimeric alpha-beta barrel A388_02329 IPR019885 Transcription regulator HTH, AsnC-type, conserved site A388_02329 IPR019887 Transcription regulator AsnC-type, C-terminal A388_02329 IPR019888 Transcription regulator AsnC-type A388_02329 IPR036388 A388_02329 A388_02329 IPR036390 A388_02329 A388_02330 IPR001123 Lysine-type exporter protein (LYSE/YGGA) A388_02331 IPR015927 Peptidase S24/S26A/S26B/S26C A388_02331 IPR036286 A388_02331 A388_02333 IPR017956 AT hook, DNA-binding motif A388_02333 IPR019626 Stress-induced protein, KGG, repeat A388_02335 IPR002347 Glucose/ribitol dehydrogenase A388_02335 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_02335 IPR036291 A388_02335 A388_02336 IPR002226 Catalase haem-binding site A388_02336 IPR010582 Catalase immune-responsive domain A388_02336 IPR011614 Catalase core domain A388_02336 IPR018028 Catalase, mono-functional, haem-containing A388_02336 IPR020835 Catalase-like domain A388_02336 IPR024712 Catalase, mono-functional, haem-containing, clade 2 A388_02336 IPR029062 Class I glutamine amidotransferase-like A388_02336 IPR037060 A388_02336 A388_02337 IPR016084 Haem oxygenase-like, multi-helical A388_02338 IPR008136 CinA, C-terminal A388_02338 IPR036653 A388_02338 A388_02346 IPR000847 Transcription regulator HTH, LysR A388_02346 IPR005119 LysR, substrate-binding A388_02346 IPR036388 A388_02346 A388_02346 IPR036390 A388_02346 A388_02347 IPR013830 A388_02347 A388_02347 IPR036514 A388_02347 A388_02348 IPR023614 Porin domain A388_02349 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_02350 IPR000873 AMP-dependent synthetase/ligase A388_02350 IPR020845 AMP-binding, conserved site A388_02350 IPR025110 AMP-binding enzyme C-terminal domain A388_02351 IPR001647 DNA-binding HTH domain, TetR-type A388_02351 IPR009057 Homeodomain-like A388_02351 IPR036271 A388_02351 A388_02352 IPR006089 Acyl-CoA dehydrogenase, conserved site A388_02352 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_02352 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_02352 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_02352 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_02352 IPR036250 A388_02352 A388_02352 IPR037069 A388_02352 A388_02353 IPR029045 ClpP/crotonase-like domain A388_02353 IPR034733 A388_02353 A388_02354 IPR001753 Crotonase superfamily A388_02354 IPR014748 Crontonase, C-terminal A388_02354 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site A388_02354 IPR029045 ClpP/crotonase-like domain A388_02355 IPR000089 Biotin/lipoyl attachment A388_02355 IPR001882 Biotin-binding site A388_02355 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain A388_02355 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal A388_02355 IPR005482 Biotin carboxylase, C-terminal A388_02355 IPR011053 Single hybrid motif A388_02355 IPR011054 Rudiment single hybrid motif A388_02355 IPR016185 Pre-ATP-grasp domain A388_02356 IPR000891 Pyruvate carboxyltransferase A388_02356 IPR013785 Aldolase-type TIM barrel A388_02357 IPR000847 Transcription regulator HTH, LysR A388_02357 IPR005119 LysR, substrate-binding A388_02357 IPR036388 A388_02357 A388_02357 IPR036390 A388_02357 A388_02358 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain A388_02358 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II A388_02358 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain A388_02358 IPR029061 Thiamin diphosphate-binding fold A388_02359 IPR029069 HotDog domain A388_02360 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_02360 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_02360 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_02360 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_02360 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria A388_02360 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain A388_02360 IPR036250 A388_02360 A388_02360 IPR037069 A388_02360 A388_02361 IPR003736 Phenylacetic acid degradation-related domain A388_02361 IPR006683 Thioesterase superfamily A388_02361 IPR029069 HotDog domain A388_02362 IPR011701 Major facilitator superfamily A388_02362 IPR036259 A388_02362 A388_02364 IPR004164 Coenzyme A transferase active site A388_02364 IPR004165 Coenzyme A transferase family I A388_02364 IPR012791 3-oxoacid CoA-transferase, subunit B A388_02364 IPR037171 A388_02364 A388_02365 IPR004165 Coenzyme A transferase family I A388_02365 IPR012792 3-oxoacid CoA-transferase, subunit A A388_02365 IPR037171 A388_02365 A388_02366 IPR005829 Sugar transporter, conserved site A388_02366 IPR011701 Major facilitator superfamily A388_02366 IPR036259 A388_02366 A388_02367 IPR006089 Acyl-CoA dehydrogenase, conserved site A388_02367 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_02367 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_02367 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_02367 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_02367 IPR036250 A388_02367 A388_02367 IPR037069 A388_02367 A388_02368 IPR001753 Crotonase superfamily A388_02368 IPR014748 Crontonase, C-terminal A388_02368 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site A388_02368 IPR029045 ClpP/crotonase-like domain A388_02369 IPR002347 Glucose/ribitol dehydrogenase A388_02369 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_02369 IPR036291 A388_02369 A388_02370 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal A388_02370 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding A388_02370 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_02370 IPR036291 A388_02370 A388_02371 IPR002155 Thiolase A388_02371 IPR016039 Thiolase-like A388_02371 IPR020610 Thiolase, active site A388_02371 IPR020613 Thiolase, conserved site A388_02371 IPR020615 Thiolase, acyl-enzyme intermediate active site A388_02371 IPR020616 Thiolase, N-terminal A388_02371 IPR020617 Thiolase, C-terminal A388_02372 IPR005471 Transcription regulator IclR, N-terminal A388_02372 IPR014757 Transcription regulator IclR, C-terminal A388_02372 IPR029016 GAF domain-like A388_02372 IPR036388 A388_02372 A388_02372 IPR036390 A388_02372 A388_02373 IPR011701 Major facilitator superfamily A388_02373 IPR036259 A388_02373 A388_02374 IPR004136 2-nitropropane dioxygenase, NPD A388_02374 IPR013785 Aldolase-type TIM barrel A388_02375 IPR001753 Crotonase superfamily A388_02375 IPR014748 Crontonase, C-terminal A388_02375 IPR029045 ClpP/crotonase-like domain A388_02376 IPR005471 Transcription regulator IclR, N-terminal A388_02376 IPR014757 Transcription regulator IclR, C-terminal A388_02376 IPR029016 GAF domain-like A388_02376 IPR036388 A388_02376 A388_02376 IPR036390 A388_02376 A388_02377 IPR003673 CoA-transferase family III A388_02377 IPR023606 CoA-transferase family III domain A388_02378 IPR006089 Acyl-CoA dehydrogenase, conserved site A388_02378 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_02378 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_02378 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_02378 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_02378 IPR036250 A388_02378 A388_02378 IPR037069 A388_02378 A388_02379 IPR005829 Sugar transporter, conserved site A388_02379 IPR011701 Major facilitator superfamily A388_02379 IPR036259 A388_02379 A388_02380 IPR006323 Phosphonoacetaldehyde hydrolase A388_02380 IPR006439 HAD hydrolase, subfamily IA A388_02380 IPR023198 Phosphoglycolate phosphatase, domain 2 A388_02380 IPR023214 HAD-like domain A388_02380 IPR036412 A388_02380 A388_02381 IPR000192 Aminotransferase class V domain A388_02381 IPR012703 2-aminoethylphosphonate--pyruvate transaminase A388_02381 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_02381 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_02381 IPR015424 Pyridoxal phosphate-dependent transferase A388_02381 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase A388_02382 IPR006076 FAD dependent oxidoreductase A388_02382 IPR017741 FAD-dependent oxidoreductase, HpnW A388_02382 IPR036188 A388_02382 A388_02383 IPR000515 MetI-like domain A388_02383 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative A388_02383 IPR035906 A388_02383 A388_02384 IPR003439 ABC transporter-like A388_02384 IPR003593 AAA+ ATPase domain A388_02384 IPR008995 Molybdate/tungstate binding, C-terminal A388_02384 IPR017871 ABC transporter, conserved site A388_02384 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02385 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative A388_02385 IPR026045 Ferric binding protein A388_02386 IPR000524 Transcription regulator HTH, GntR A388_02386 IPR011663 UbiC transcription regulator-associated A388_02386 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain A388_02386 IPR036388 A388_02386 A388_02386 IPR036390 A388_02386 A388_02387 IPR002938 Monooxygenase, FAD-binding A388_02387 IPR012733 4-hydroxybenzoate 3-monooxygenase A388_02387 IPR036188 A388_02387 A388_02388 IPR005471 Transcription regulator IclR, N-terminal A388_02388 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR A388_02388 IPR014757 Transcription regulator IclR, C-terminal A388_02388 IPR029016 GAF domain-like A388_02388 IPR036388 A388_02388 A388_02388 IPR036390 A388_02388 A388_02389 IPR003680 Flavodoxin-like fold A388_02389 IPR023048 NADH-azoreductase, FMN-dependent A388_02389 IPR029039 Flavoprotein-like A388_02390 IPR000847 Transcription regulator HTH, LysR A388_02390 IPR005119 LysR, substrate-binding A388_02390 IPR036388 A388_02390 A388_02390 IPR036390 A388_02390 A388_02391 IPR003779 Carboxymuconolactone decarboxylase-like A388_02391 IPR029032 AhpD-like A388_02392 IPR010102 Succinate semialdehyde dehydrogenase A388_02392 IPR015590 Aldehyde dehydrogenase domain A388_02392 IPR016160 Aldehyde dehydrogenase, cysteine active site A388_02392 IPR016161 Aldehyde/histidinol dehydrogenase A388_02392 IPR016162 Aldehyde dehydrogenase, N-terminal A388_02392 IPR016163 Aldehyde dehydrogenase, C-terminal A388_02392 IPR029510 Aldehyde dehydrogenase, glutamic acid active site A388_02394 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin A388_02394 IPR026030 Purine-cytosine permease A388_02394 IPR038271 A388_02394 A388_02395 IPR015590 Aldehyde dehydrogenase domain A388_02395 IPR016160 Aldehyde dehydrogenase, cysteine active site A388_02395 IPR016161 Aldehyde/histidinol dehydrogenase A388_02395 IPR016162 Aldehyde dehydrogenase, N-terminal A388_02395 IPR016163 Aldehyde dehydrogenase, C-terminal A388_02395 IPR029510 Aldehyde dehydrogenase, glutamic acid active site A388_02396 IPR011251 Luciferase-like domain A388_02396 IPR036661 A388_02396 A388_02397 IPR002563 Flavin reductase-like, FMN-binding A388_02397 IPR012349 FMN-binding split barrel A388_02398 IPR000073 Alpha/beta hydrolase fold-1 A388_02398 IPR029058 Alpha/Beta hydrolase fold A388_02399 IPR009569 Amino acid synthesis, putative A388_02399 IPR035936 A388_02399 A388_02400 IPR000524 Transcription regulator HTH, GntR A388_02400 IPR008920 Transcription regulator FadR/GntR, C-terminal A388_02400 IPR011711 GntR, C-terminal A388_02400 IPR036388 A388_02400 A388_02400 IPR036390 A388_02400 A388_02401 IPR010753 Protein of unknown function DUF1330 A388_02401 IPR011008 Dimeric alpha-beta barrel A388_02402 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase A388_02402 IPR016174 Di-haem cytochrome, transmembrane A388_02403 IPR011614 Catalase core domain A388_02403 IPR020835 Catalase-like domain A388_02403 IPR024168 Catalase, SrpA-type, predicted A388_02404 IPR001584 Integrase, catalytic core A388_02404 IPR012337 Ribonuclease H-like domain A388_02404 IPR025246 Transposase IS30-like HTH domain A388_02404 IPR036397 A388_02404 A388_02405 IPR011701 Major facilitator superfamily A388_02405 IPR036259 A388_02405 A388_02406 IPR000891 Pyruvate carboxyltransferase A388_02406 IPR013785 Aldolase-type TIM barrel A388_02407 IPR003673 CoA-transferase family III A388_02407 IPR023606 CoA-transferase family III domain A388_02408 IPR000847 Transcription regulator HTH, LysR A388_02408 IPR005119 LysR, substrate-binding A388_02408 IPR036388 A388_02408 A388_02408 IPR036390 A388_02408 A388_02413 IPR002059 Cold-shock protein, DNA-binding A388_02413 IPR011129 Cold shock protein A388_02413 IPR012156 Cold shock, CspA A388_02413 IPR012340 Nucleic acid-binding, OB-fold A388_02413 IPR019844 Cold-shock conserved site A388_02415 IPR025668 Transposase DDE domain A388_02419 IPR001647 DNA-binding HTH domain, TetR-type A388_02419 IPR009057 Homeodomain-like A388_02420 IPR013986 DExx box DNA helicase domain A388_02420 IPR014017 DNA helicase, UvrD-like, C-terminal A388_02420 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02420 IPR034739 A388_02420 A388_02421 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02422 IPR003736 Phenylacetic acid degradation-related domain A388_02422 IPR006683 Thioesterase superfamily A388_02422 IPR029069 HotDog domain A388_02423 IPR001451 Bacterial transferase hexapeptide repeat A388_02423 IPR011004 Trimeric LpxA-like A388_02424 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX A388_02424 IPR012906 PaaX-like, N-terminal A388_02424 IPR013225 PaaX-like, C-terminal A388_02424 IPR036388 A388_02424 A388_02425 IPR000873 AMP-dependent synthetase/ligase A388_02425 IPR011880 Phenylacetate-CoA ligase A388_02425 IPR028154 AMP-dependent ligase, C-terminal A388_02426 IPR002155 Thiolase A388_02426 IPR012793 Beta-ketoadipyl CoA thiolase A388_02426 IPR016039 Thiolase-like A388_02426 IPR020610 Thiolase, active site A388_02426 IPR020613 Thiolase, conserved site A388_02426 IPR020615 Thiolase, acyl-enzyme intermediate active site A388_02426 IPR020616 Thiolase, N-terminal A388_02426 IPR020617 Thiolase, C-terminal A388_02427 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal A388_02427 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding A388_02427 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_02427 IPR036291 A388_02427 A388_02428 IPR001753 Crotonase superfamily A388_02428 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB A388_02428 IPR014748 Crontonase, C-terminal A388_02428 IPR029045 ClpP/crotonase-like domain A388_02429 IPR001753 Crotonase superfamily A388_02429 IPR014748 Crontonase, C-terminal A388_02429 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site A388_02429 IPR029045 ClpP/crotonase-like domain A388_02430 IPR001041 2Fe-2S ferredoxin-type domain A388_02430 IPR001221 Phenol hydroxylase reductase A388_02430 IPR001433 Oxidoreductase FAD/NAD(P)-binding A388_02430 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase A388_02430 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site A388_02430 IPR008333 Oxidoreductase, FAD-binding domain A388_02430 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit A388_02430 IPR012675 Beta-grasp domain A388_02430 IPR017938 Riboflavin synthase-like beta-barrel A388_02430 IPR036010 A388_02430 A388_02430 IPR039261 A388_02430 A388_02431 IPR002744 Domain of unknown function DUF59 A388_02431 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit A388_02431 IPR034904 A388_02431 A388_02432 IPR007814 Phenylacetic acid catabolic A388_02432 IPR009078 Ferritin-like superfamily A388_02432 IPR011882 Phenylacetate-CoA oxygenase, PaaI subunit A388_02432 IPR012347 Ferritin-related A388_02433 IPR009359 Phenylacetic acid degradation B A388_02433 IPR038693 A388_02433 A388_02434 IPR007814 Phenylacetic acid catabolic A388_02434 IPR009078 Ferritin-like superfamily A388_02434 IPR011881 Phenylacetate-CoA oxygenase, PaaG subunit A388_02434 IPR012347 Ferritin-related A388_02435 IPR002539 MaoC-like domain A388_02435 IPR011966 Phenylacetic acid degradation protein PaaN A388_02435 IPR015590 Aldehyde dehydrogenase domain A388_02435 IPR016161 Aldehyde/histidinol dehydrogenase A388_02435 IPR016162 Aldehyde dehydrogenase, N-terminal A388_02435 IPR016163 Aldehyde dehydrogenase, C-terminal A388_02435 IPR029069 HotDog domain A388_02436 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form A388_02436 IPR005130 Serine dehydratase-like, alpha subunit A388_02436 IPR005131 Serine dehydratase beta chain A388_02436 IPR029009 Allosteric substrate binding domain A388_02437 IPR002293 Amino acid/polyamine transporter I A388_02438 IPR015590 Aldehyde dehydrogenase domain A388_02438 IPR016161 Aldehyde/histidinol dehydrogenase A388_02438 IPR016162 Aldehyde dehydrogenase, N-terminal A388_02438 IPR016163 Aldehyde dehydrogenase, C-terminal A388_02439 IPR005828 General substrate transporter A388_02439 IPR005829 Sugar transporter, conserved site A388_02439 IPR036259 A388_02439 A388_02440 IPR009057 Homeodomain-like A388_02440 IPR013656 PAS fold-4 A388_02440 IPR018060 DNA binding HTH domain, AraC-type A388_02440 IPR018062 HTH domain AraC-type, conserved site A388_02440 IPR020449 Transcription regulator HTH, AraC- type A388_02440 IPR035965 A388_02440 A388_02441 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B A388_02441 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_02441 IPR036188 A388_02441 A388_02442 IPR036010 A388_02442 A388_02443 IPR006076 FAD dependent oxidoreductase A388_02443 IPR036188 A388_02443 A388_02444 IPR008794 Proline racemase family A388_02445 IPR000524 Transcription regulator HTH, GntR A388_02445 IPR008920 Transcription regulator FadR/GntR, C-terminal A388_02445 IPR011711 GntR, C-terminal A388_02445 IPR036388 A388_02445 A388_02445 IPR036390 A388_02445 A388_02446 IPR000620 Drug/metabolite transporter A388_02447 IPR002220 DapA-like A388_02447 IPR013785 Aldolase-type TIM barrel A388_02449 IPR005590 Protein of unknown function DUF333 A388_02449 IPR021719 Proteinase inhibitor I78 A388_02450 IPR000551 MerR-type HTH domain A388_02450 IPR009061 DNA binding domain, putative A388_02450 IPR010211 Redox-sensitive transcriptional activator SoxR A388_02450 IPR015358 Transcription regulator MerR, DNA binding A388_02452 IPR003828 Protein of unknown function DUF208 A388_02453 IPR000182 GNAT domain A388_02453 IPR016181 Acyl-CoA N-acyltransferase A388_02454 IPR009351 Protein of unknown function DUF1006 A388_02455 IPR011701 Major facilitator superfamily A388_02455 IPR036259 A388_02455 A388_02456 IPR002125 CMP/dCMP deaminase, zinc-binding A388_02456 IPR016192 APOBEC/CMP deaminase, zinc-binding A388_02456 IPR016193 Cytidine deaminase-like A388_02457 IPR002110 Ankyrin repeat A388_02457 IPR020683 Ankyrin repeat-containing domain A388_02457 IPR036770 A388_02457 A388_02458 IPR000847 Transcription regulator HTH, LysR A388_02458 IPR005119 LysR, substrate-binding A388_02458 IPR036388 A388_02458 A388_02458 IPR036390 A388_02458 A388_02459 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain A388_02459 IPR039561 A388_02459 A388_02461 IPR017732 Type IV / VI secretion system, DotU A388_02461 IPR038522 A388_02461 A388_02462 IPR010263 Protein of unknown function DUF876 A388_02463 IPR010657 ImpA, N-terminal A388_02463 IPR017740 Type VI secretion system-associated, ImpA A388_02464 IPR001270 ClpA/B family A388_02464 IPR003593 AAA+ ATPase domain A388_02464 IPR003959 ATPase, AAA-type, core A388_02464 IPR017729 Type VI secretion system, ATPase ClpV1 A388_02464 IPR018368 ClpA/B, conserved site 1 A388_02464 IPR019489 Clp ATPase, C-terminal A388_02464 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02464 IPR028299 ClpA/B, conserved site 2 A388_02464 IPR036628 A388_02464 A388_02465 IPR008727 PAAR motif A388_02466 IPR006664 Outer membrane protein, bacterial A388_02466 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal A388_02466 IPR036737 A388_02466 A388_02467 IPR017748 Type VI secretion system-associated, BMAA0400 A388_02467 IPR038225 A388_02467 A388_02468 IPR009612 ImcF-related A388_02468 IPR010623 Domain of unknown function DUF1215 A388_02468 IPR017731 Type VI secretion system, IcmF A388_02468 IPR025743 ImcF-related, N-terminal domain A388_02468 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02470 IPR010732 Protein of unknown function DUF1305 A388_02471 IPR010272 Type VI secretion system, VCA0110 A388_02472 IPR007048 GpW/Gp25/anti-adapter protein IraD A388_02472 IPR017737 Type VI secretion system, lysozyme-related protein A388_02473 IPR008514 Type VI secretion system effector, Hcp A388_02473 IPR036624 A388_02473 A388_02474 IPR010269 Protein of unknown function DUF877 A388_02475 IPR001584 Integrase, catalytic core A388_02475 IPR012337 Ribonuclease H-like domain A388_02475 IPR025246 Transposase IS30-like HTH domain A388_02475 IPR036397 A388_02475 A388_02477 IPR008312 Uncharacterised conserved protein UCP028301 A388_02479 IPR032710 A388_02479 A388_02480 IPR000515 MetI-like domain A388_02480 IPR035906 A388_02480 A388_02481 IPR003439 ABC transporter-like A388_02481 IPR003593 AAA+ ATPase domain A388_02481 IPR017871 ABC transporter, conserved site A388_02481 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02482 IPR015168 SsuA/THI5-like A388_02483 IPR014085 Allophanate hydrolase A388_02483 IPR023631 Amidase signature domain A388_02483 IPR036928 A388_02483 A388_02484 IPR010985 Ribbon-helix-helix A388_02484 IPR013321 Arc-type ribbon-helix-helix A388_02484 IPR014864 Transcription factor, NikR, nickel binding C-terminal A388_02484 IPR027271 A388_02484 A388_02486 IPR002577 Helix-turn-helix, HxlR type A388_02486 IPR036388 A388_02486 A388_02486 IPR036390 A388_02486 A388_02487 IPR003680 Flavodoxin-like fold A388_02487 IPR029039 Flavoprotein-like A388_02488 IPR000089 Biotin/lipoyl attachment A388_02488 IPR003778 Allophanate hydrolase subunit 2 A388_02488 IPR003833 Allophanate hydrolase subunit 1 A388_02488 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain A388_02488 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal A388_02488 IPR005482 Biotin carboxylase, C-terminal A388_02488 IPR011053 Single hybrid motif A388_02488 IPR011054 Rudiment single hybrid motif A388_02488 IPR014084 Urea carboxylase A388_02488 IPR016185 Pre-ATP-grasp domain A388_02488 IPR029000 Cyclophilin-like domain A388_02489 IPR017791 Urea carboxylase-associated protein 1 A388_02489 IPR018959 Domain of unknown function DUF1989 A388_02490 IPR017792 Urea carboxylase-associated protein 2 A388_02490 IPR018959 Domain of unknown function DUF1989 A388_02491 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site A388_02491 IPR011032 GroES (chaperonin 10)-like A388_02491 IPR013154 Alcohol dehydrogenase GroES-like A388_02491 IPR020843 Polyketide synthase, enoylreductase A388_02491 IPR027399 Alcohol dehydrogenase GroES-associated N-terminal domain A388_02491 IPR036291 A388_02491 A388_02492 IPR019587 Polyketide cyclase/dehydrase A388_02492 IPR023393 START-like domain A388_02493 IPR001647 DNA-binding HTH domain, TetR-type A388_02493 IPR009057 Homeodomain-like A388_02497 IPR006597 Sel1-like A388_02497 IPR011990 Tetratricopeptide-like helical domain A388_02498 IPR001807 Chloride channel, voltage gated A388_02498 IPR014743 Chloride channel, core A388_02499 IPR000089 Biotin/lipoyl attachment A388_02499 IPR001882 Biotin-binding site A388_02499 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain A388_02499 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal A388_02499 IPR005482 Biotin carboxylase, C-terminal A388_02499 IPR011053 Single hybrid motif A388_02499 IPR011054 Rudiment single hybrid motif A388_02499 IPR016185 Pre-ATP-grasp domain A388_02500 IPR003778 Allophanate hydrolase subunit 2 A388_02500 IPR003833 Allophanate hydrolase subunit 1 A388_02500 IPR029000 Cyclophilin-like domain A388_02501 IPR009906 Protein of unknown function DUF1445 A388_02501 IPR016938 Uncharacterised protein family UPF0317 A388_02501 IPR038021 A388_02501 A388_02502 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF A388_02502 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel A388_02503 IPR001046 NRAMP family A388_02504 IPR000847 Transcription regulator HTH, LysR A388_02504 IPR005119 LysR, substrate-binding A388_02504 IPR036388 A388_02504 A388_02504 IPR036390 A388_02504 A388_02508 IPR022385 Rhs repeat-associated core A388_02511 IPR001826 RHS protein A388_02511 IPR006530 YD repeat A388_02511 IPR022385 Rhs repeat-associated core A388_02511 IPR031325 A388_02511 A388_02511 IPR032871 A388_02511 A388_02512 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein A388_02512 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset A388_02512 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal A388_02512 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain A388_02512 IPR037026 A388_02512 A388_02513 IPR012338 Beta-lactamase/transpeptidase-like A388_02514 IPR000182 GNAT domain A388_02514 IPR016181 Acyl-CoA N-acyltransferase A388_02516 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal A388_02516 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding A388_02516 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_02516 IPR013328 Dehydrogenase, multihelical A388_02516 IPR022694 3-hydroxyacyl-CoA dehydrogenase A388_02516 IPR036291 A388_02516 A388_02517 IPR014955 Protein of unknown function DUF1826 A388_02518 IPR036278 A388_02518 A388_02519 IPR019223 Domain of unknown function DUF2147 A388_02520 IPR005829 Sugar transporter, conserved site A388_02520 IPR011701 Major facilitator superfamily A388_02520 IPR036259 A388_02520 A388_02521 IPR001647 DNA-binding HTH domain, TetR-type A388_02521 IPR009057 Homeodomain-like A388_02522 IPR002559 Transposase, IS4-like A388_02522 IPR012337 Ribonuclease H-like domain A388_02523 IPR002559 Transposase, IS4-like A388_02523 IPR012337 Ribonuclease H-like domain A388_02524 IPR004960 Bacterial lipid A biosynthesis acyltransferase A388_02524 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase A388_02525 IPR001633 EAL domain A388_02525 IPR035919 A388_02525 A388_02527 IPR000620 Drug/metabolite transporter A388_02528 IPR000485 AsnC-type HTH domain A388_02528 IPR011008 Dimeric alpha-beta barrel A388_02528 IPR019887 Transcription regulator AsnC-type, C-terminal A388_02528 IPR019888 Transcription regulator AsnC-type A388_02528 IPR036388 A388_02528 A388_02528 IPR036390 A388_02528 A388_02529 IPR000432 DNA mismatch repair protein MutS, C-terminal A388_02529 IPR005748 DNA mismatch repair protein MutS, type 1 A388_02529 IPR007695 DNA mismatch repair protein MutS-like, N-terminal A388_02529 IPR007696 DNA mismatch repair protein MutS, core A388_02529 IPR007860 DNA mismatch repair protein MutS, connector domain A388_02529 IPR007861 DNA mismatch repair protein MutS, clamp A388_02529 IPR016151 DNA mismatch repair protein MutS, N-terminal A388_02529 IPR017261 DNA mismatch repair protein Msh6 A388_02529 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02529 IPR036187 A388_02529 A388_02529 IPR036678 A388_02529 A388_02530 IPR000182 GNAT domain A388_02530 IPR016181 Acyl-CoA N-acyltransferase A388_02531 IPR000813 7Fe ferredoxin A388_02531 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain A388_02531 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site A388_02531 IPR022569 Ferredoxin, C-terminal A388_02532 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain A388_02532 IPR013230 Peptidase M15A, C-terminal A388_02533 IPR002935 O-methyltransferase, family 3 A388_02533 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_02534 IPR006015 Universal stress protein A A388_02534 IPR006016 UspA A388_02535 IPR001451 Bacterial transferase hexapeptide repeat A388_02535 IPR011004 Trimeric LpxA-like A388_02535 IPR018357 Hexapeptide transferase, conserved site A388_02536 IPR001498 Impact, N-terminal A388_02536 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal A388_02536 IPR020568 Ribosomal protein S5 domain 2-type fold A388_02536 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site A388_02536 IPR035647 A388_02536 A388_02536 IPR036956 A388_02536 A388_02537 IPR003997 RTX secretion protein D, Gram-negative bacteria A388_02537 IPR006144 Secretion protein HlyD, conserved site A388_02537 IPR010129 Type I secretion membrane fusion protein, HlyD A388_02537 IPR039562 A388_02537 A388_02538 IPR003439 ABC transporter-like A388_02538 IPR003593 AAA+ ATPase domain A388_02538 IPR011527 ABC transporter type 1, transmembrane domain A388_02538 IPR017750 ATPase, type I secretion system A388_02538 IPR017871 ABC transporter, conserved site A388_02538 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02538 IPR036640 A388_02538 A388_02539 IPR003423 Outer membrane efflux protein A388_02540 IPR003439 ABC transporter-like A388_02540 IPR003593 AAA+ ATPase domain A388_02540 IPR017871 ABC transporter, conserved site A388_02540 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02540 IPR030921 A388_02540 A388_02540 IPR032823 A388_02540 A388_02541 IPR005653 Organic solvent tolerance-like, N-terminal A388_02541 IPR014340 Lipopolysaccharide assembly, LptA A388_02542 IPR010664 Lipopolysaccharide assembly, LptC-related A388_02542 IPR026265 Lipopolysaccharide export system protein LptC A388_02543 IPR006549 HAD-superfamily hydrolase,subfamily IIIA A388_02543 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase A388_02543 IPR023214 HAD-like domain A388_02543 IPR036412 A388_02543 A388_02544 IPR000644 CBS domain A388_02544 IPR001347 Sugar isomerase (SIS) A388_02544 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type A388_02545 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding A388_02545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_02545 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR A388_02545 IPR015803 Cysteine-tRNA ligase A388_02545 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase A388_02545 IPR032678 A388_02545 A388_02548 IPR002104 Integrase, catalytic A388_02548 IPR010998 Integrase, Lambda-type, N-terminal A388_02548 IPR011010 DNA breaking-rejoining enzyme, catalytic core A388_02548 IPR013762 Integrase-like, catalytic core A388_02552 IPR008565 Protein of unknown function DUF847 A388_02552 IPR018537 Peptidoglycan binding domain A388_02552 IPR023346 Lysozyme-like domain A388_02553 IPR008565 Protein of unknown function DUF847 A388_02553 IPR023346 Lysozyme-like domain A388_02554 IPR032620 A388_02554 A388_02556 IPR006626 Parallel beta-helix repeat A388_02556 IPR011050 Pectin lyase fold/virulence factor A388_02556 IPR012334 Pectin lyase fold A388_02557 IPR003961 Fibronectin, type III A388_02557 IPR013783 Immunoglobulin-like fold A388_02557 IPR036116 A388_02557 A388_02560 IPR016913 Uncharacterised conserved protein UCP029215 A388_02562 IPR019226 Protein of unknown function DUF2158 A388_02563 IPR006528 Phage head morphogenesis domain A388_02564 IPR006445 Phage-associated protein HI1409 A388_02564 IPR024459 Protein of unknown function DUF1073 A388_02565 IPR006517 Archaeophage PsiM2, terminase large subunit A388_02565 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02565 IPR035421 A388_02565 A388_02566 IPR018738 Protein of unknown function DUF2280 A388_02575 IPR025419 Domain of unknown function DUF4142 A388_02577 IPR002577 Helix-turn-helix, HxlR type A388_02577 IPR036388 A388_02577 A388_02577 IPR036390 A388_02577 A388_02578 IPR011701 Major facilitator superfamily A388_02578 IPR036259 A388_02578 A388_02579 IPR006528 Phage head morphogenesis domain A388_02583 IPR000304 Pyrroline-5-carboxylate reductase A388_02583 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_02583 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal A388_02583 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain A388_02583 IPR036291 A388_02583 A388_02585 IPR025668 Transposase DDE domain A388_02586 IPR002059 Cold-shock protein, DNA-binding A388_02586 IPR011129 Cold shock protein A388_02586 IPR012156 Cold shock, CspA A388_02586 IPR012340 Nucleic acid-binding, OB-fold A388_02586 IPR019844 Cold-shock conserved site A388_02587 IPR001123 Lysine-type exporter protein (LYSE/YGGA) A388_02588 IPR008565 Protein of unknown function DUF847 A388_02588 IPR018537 Peptidoglycan binding domain A388_02588 IPR023346 Lysozyme-like domain A388_02591 IPR001387 Cro/C1-type helix-turn-helix domain A388_02591 IPR010982 Lambda repressor-like, DNA-binding domain A388_02591 IPR015927 Peptidase S24/S26A/S26B/S26C A388_02591 IPR036286 A388_02591 A388_02594 IPR003753 Exonuclease VII, large subunit A388_02594 IPR020579 Exonuclease VII, large subunit, C-terminal A388_02594 IPR025824 OB-fold nucleic acid binding domain A388_02595 IPR003761 Exonuclease VII, small subunit A388_02597 IPR001123 Lysine-type exporter protein (LYSE/YGGA) A388_02599 IPR005560 Protein of unknown function DUF326 A388_02601 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V A388_02601 IPR011057 Mss4-like A388_02602 IPR000551 MerR-type HTH domain A388_02602 IPR009061 DNA binding domain, putative A388_02602 IPR011789 Cu(I)-responsive transcriptional regulator A388_02602 IPR015358 Transcription regulator MerR, DNA binding A388_02603 IPR001757 Cation-transporting P-type ATPase A388_02603 IPR006121 Heavy metal-associated domain, HMA A388_02603 IPR006122 Heavy metal-associated domain, copper ion-binding A388_02603 IPR008250 P-type ATPase, A domain A388_02603 IPR017969 Heavy-metal-associated, conserved site A388_02603 IPR018303 P-type ATPase, phosphorylation site A388_02603 IPR023214 HAD-like domain A388_02603 IPR023298 P-type ATPase, transmembrane domain A388_02603 IPR023299 P-type ATPase, cytoplasmic domain N A388_02603 IPR027256 Cation-transporting P-type ATPase, subfamily IB A388_02603 IPR036163 A388_02603 A388_02603 IPR036412 A388_02603 A388_02604 IPR006121 Heavy metal-associated domain, HMA A388_02604 IPR017969 Heavy-metal-associated, conserved site A388_02604 IPR036163 A388_02604 A388_02605 IPR000847 Transcription regulator HTH, LysR A388_02605 IPR005119 LysR, substrate-binding A388_02605 IPR036388 A388_02605 A388_02605 IPR036390 A388_02605 A388_02606 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit A388_02606 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain A388_02606 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site A388_02606 IPR017639 Benzoate 1,2-dioxygenase, large subunit A388_02606 IPR017941 Rieske [2Fe-2S] iron-sulphur domain A388_02606 IPR036922 A388_02606 A388_02607 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit A388_02607 IPR017641 Benzoate 1,2-dioxygenase, small subunit A388_02607 IPR032710 A388_02607 A388_02608 IPR001041 2Fe-2S ferredoxin-type domain A388_02608 IPR001221 Phenol hydroxylase reductase A388_02608 IPR001433 Oxidoreductase FAD/NAD(P)-binding A388_02608 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase A388_02608 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site A388_02608 IPR008333 Oxidoreductase, FAD-binding domain A388_02608 IPR012675 Beta-grasp domain A388_02608 IPR017938 Riboflavin synthase-like beta-barrel A388_02608 IPR036010 A388_02608 A388_02608 IPR039261 A388_02608 A388_02609 IPR002347 Glucose/ribitol dehydrogenase A388_02609 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_02609 IPR036291 A388_02609 A388_02610 IPR004711 Benzoate transporter A388_02611 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family A388_02611 IPR005829 Sugar transporter, conserved site A388_02611 IPR011701 Major facilitator superfamily A388_02611 IPR036259 A388_02611 A388_02612 IPR005318 Outer membrane porin, bacterial A388_02612 IPR023614 Porin domain A388_02613 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal A388_02613 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A388_02613 IPR016039 Thiolase-like A388_02613 IPR018201 Beta-ketoacyl synthase, active site A388_02614 IPR001650 Helicase, C-terminal A388_02614 IPR003593 AAA+ ATPase domain A388_02614 IPR007502 Helicase-associated domain A388_02614 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type A388_02614 IPR011545 DEAD/DEAH box helicase domain A388_02614 IPR011709 Domain of unknown function DUF1605 A388_02614 IPR014001 Helicase, superfamily 1/2, ATP-binding domain A388_02614 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal A388_02614 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02615 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant A388_02615 IPR017559 Alkyl hydroperoxide reductase subunit C A388_02615 IPR019479 Peroxiredoxin, C-terminal A388_02615 IPR024706 Peroxiredoxin, AhpC-type A388_02615 IPR036249 A388_02615 A388_02616 IPR025309 KTSC domain A388_02617 IPR002935 O-methyltransferase, family 3 A388_02617 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_02618 IPR023387 DUF1653-like domain A388_02618 IPR037135 A388_02618 A388_02619 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II A388_02619 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site A388_02619 IPR012081 Alkyl hydroperoxide reductase subunit F A388_02619 IPR012336 Thioredoxin-like fold A388_02619 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_02619 IPR036188 A388_02619 A388_02619 IPR036249 A388_02619 A388_02621 IPR004045 Glutathione S-transferase, N-terminal A388_02621 IPR004046 Glutathione S-transferase, C-terminal A388_02621 IPR036249 A388_02621 A388_02621 IPR036282 A388_02621 A388_02622 IPR001322 Lamin Tail Domain A388_02622 IPR036691 A388_02622 A388_02623 IPR003358 tRNA (guanine-N-7) methyltransferase A388_02623 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_02624 IPR004045 Glutathione S-transferase, N-terminal A388_02624 IPR004046 Glutathione S-transferase, C-terminal A388_02624 IPR036249 A388_02624 A388_02624 IPR036282 A388_02624 A388_02625 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_02625 IPR018931 Domain of unknown function DUF2520 A388_02625 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal A388_02625 IPR036291 A388_02625 A388_02625 IPR037108 A388_02625 A388_02626 IPR006664 Outer membrane protein, bacterial A388_02626 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal A388_02626 IPR006690 Outer membrane protein, OmpA-like, conserved site A388_02626 IPR036737 A388_02626 A388_02627 IPR011059 Metal-dependent hydrolase, composite domain A388_02627 IPR032466 A388_02627 A388_02628 IPR002082 Aspartate carbamoyltransferase A388_02628 IPR006130 Aspartate/ornithine carbamoyltransferase A388_02628 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain A388_02628 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding A388_02628 IPR036901 A388_02628 A388_02630 IPR000241 Putative RNA methylase domain A388_02630 IPR002052 DNA methylase, N-6 adenine-specific, conserved site A388_02630 IPR004114 THUMP A388_02630 IPR017244 Ribosomal RNA large subunit methyltransferase K/L A388_02630 IPR019614 S-adenosylmethionine-dependent methyltransferase A388_02630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_02632 IPR008136 CinA, C-terminal A388_02632 IPR036653 A388_02632 A388_02633 IPR001270 ClpA/B family A388_02633 IPR003593 AAA+ ATPase domain A388_02633 IPR003959 ATPase, AAA-type, core A388_02633 IPR004176 Clp, N-terminal A388_02633 IPR017730 Chaperonin ClpB A388_02633 IPR018368 ClpA/B, conserved site 1 A388_02633 IPR019489 Clp ATPase, C-terminal A388_02633 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02633 IPR028299 ClpA/B, conserved site 2 A388_02633 IPR036628 A388_02633 A388_02634 IPR011055 Duplicated hybrid motif A388_02634 IPR016047 Peptidase M23 A388_02635 IPR000182 GNAT domain A388_02635 IPR016181 Acyl-CoA N-acyltransferase A388_02636 IPR003718 OsmC/Ohr family A388_02636 IPR015946 K homology domain-like, alpha/beta A388_02636 IPR036102 A388_02636 A388_02637 IPR000595 Cyclic nucleotide-binding domain A388_02637 IPR012318 Helix-turn-helix motif, Crp-type A388_02637 IPR014710 RmlC-like jelly roll fold A388_02637 IPR018335 Transcription regulator HTH, Crp-type, conserved site A388_02637 IPR018488 Cyclic nucleotide-binding, conserved site A388_02637 IPR018490 Cyclic nucleotide-binding-like A388_02637 IPR036388 A388_02637 A388_02637 IPR036390 A388_02637 A388_02638 IPR001584 Integrase, catalytic core A388_02638 IPR012337 Ribonuclease H-like domain A388_02638 IPR025246 Transposase IS30-like HTH domain A388_02638 IPR036397 A388_02638 A388_02639 IPR020471 Aldo/keto reductase subgroup A388_02639 IPR023210 NADP-dependent oxidoreductase domain A388_02639 IPR036812 A388_02639 A388_02640 IPR001915 Peptidase M48 A388_02642 IPR001114 Adenylosuccinate synthetase A388_02642 IPR018220 Adenylosuccinate synthase, active site A388_02642 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02642 IPR033128 A388_02642 A388_02643 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit A388_02643 IPR004517 ATP phosphoribosyltransferase regulatory subunit A388_02644 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I A388_02644 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain A388_02644 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain A388_02644 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site A388_02644 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family A388_02644 IPR036291 A388_02644 A388_02645 IPR002318 Alanine-tRNA ligase, class IIc A388_02645 IPR003156 DHHA1 domain A388_02645 IPR009000 Translation protein, beta-barrel domain A388_02645 IPR012947 Threonyl/alanyl tRNA synthetase, SAD A388_02645 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain A388_02645 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain A388_02645 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal A388_02645 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria A388_02646 IPR002104 Integrase, catalytic A388_02646 IPR010998 Integrase, Lambda-type, N-terminal A388_02646 IPR011010 DNA breaking-rejoining enzyme, catalytic core A388_02646 IPR013762 Integrase-like, catalytic core A388_02646 IPR025166 Domain of unknown function DUF4102 A388_02646 IPR038488 A388_02646 A388_02649 IPR025668 Transposase DDE domain A388_02651 IPR008727 PAAR motif A388_02654 IPR013423 Conserved hypothetical protein CHP02594 A388_02655 IPR032124 A388_02655 A388_02660 IPR001650 Helicase, C-terminal A388_02660 IPR002052 DNA methylase, N-6 adenine-specific, conserved site A388_02660 IPR006935 Helicase/UvrB domain A388_02660 IPR014001 Helicase, superfamily 1/2, ATP-binding domain A388_02660 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_02668 IPR015406 Domain of unknown function DUF1983 A388_02668 IPR039477 A388_02668 A388_02683 IPR022225 Phage tail fibre protein A388_02684 IPR036844 A388_02684 A388_02686 IPR000962 Zinc finger, DksA/TraR C4-type A388_02697 IPR018875 Antirepressor protein ANT, N-terminal A388_02698 IPR031807 A388_02698 A388_02698 IPR035069 A388_02698 A388_02703 IPR001387 Cro/C1-type helix-turn-helix domain A388_02703 IPR010982 Lambda repressor-like, DNA-binding domain A388_02704 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like A388_02704 IPR036614 A388_02704 A388_02705 IPR025668 Transposase DDE domain A388_02708 IPR002611 IstB-like ATP-binding protein A388_02708 IPR003593 AAA+ ATPase domain A388_02708 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02710 IPR001525 C-5 cytosine methyltransferase A388_02710 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_02712 IPR002500 Phosphoadenosine phosphosulphate reductase A388_02717 IPR010982 Lambda repressor-like, DNA-binding domain A388_02718 IPR036286 A388_02718 A388_02723 IPR012337 Ribonuclease H-like domain A388_02723 IPR013520 Exonuclease, RNase T/DNA polymerase III A388_02723 IPR036397 A388_02723 A388_02724 IPR025153 Ead/Ea22-like protein A388_02731 IPR001048 Aspartate/glutamate/uridylate kinase A388_02731 IPR001341 Aspartate kinase domain A388_02731 IPR002912 ACT domain A388_02731 IPR005260 Aspartate kinase, monofunctional class A388_02731 IPR018042 Aspartate kinase, conserved site A388_02731 IPR027795 GATS-like ACT domain A388_02731 IPR036393 A388_02731 A388_02732 IPR003751 Carbon storage regulator A388_02732 IPR036107 A388_02732 A388_02733 IPR012337 Ribonuclease H-like domain A388_02733 IPR022898 Ribonuclease HII A388_02733 IPR024567 Ribonuclease HII/HIII domain A388_02733 IPR036397 A388_02733 A388_02735 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase A388_02735 IPR016174 Di-haem cytochrome, transmembrane A388_02736 IPR001365 Adenosine/AMP deaminase domain A388_02736 IPR006330 Adenosine/adenine deaminase A388_02736 IPR028892 Adenine deaminase type 2 A388_02736 IPR032466 A388_02736 A388_02737 IPR006043 Xanthine/uracil/vitamin C permease A388_02737 IPR026033 Purine permease PbuG-like A388_02739 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II A388_02739 IPR020946 Flavin monooxygenase-like A388_02739 IPR036188 A388_02739 A388_02740 IPR002347 Glucose/ribitol dehydrogenase A388_02740 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_02740 IPR036291 A388_02740 A388_02741 IPR016516 Uncharacterised conserved protein UCP07580 A388_02742 IPR003829 Pirin, N-terminal domain A388_02742 IPR011051 RmlC-like cupin domain A388_02742 IPR012093 Pirin A388_02742 IPR014710 RmlC-like jelly roll fold A388_02743 IPR001647 DNA-binding HTH domain, TetR-type A388_02743 IPR009057 Homeodomain-like A388_02743 IPR023772 DNA-binding HTH domain, TetR-type, conserved site A388_02744 IPR016516 Uncharacterised conserved protein UCP07580 A388_02745 IPR002347 Glucose/ribitol dehydrogenase A388_02745 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_02745 IPR036291 A388_02745 A388_02746 IPR036188 A388_02746 A388_02747 IPR007213 Leucine carboxyl methyltransferase A388_02747 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative A388_02747 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_02748 IPR009057 Homeodomain-like A388_02748 IPR018060 DNA binding HTH domain, AraC-type A388_02748 IPR032687 A388_02748 A388_02749 IPR020946 Flavin monooxygenase-like A388_02749 IPR036188 A388_02749 A388_02750 IPR002347 Glucose/ribitol dehydrogenase A388_02750 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_02750 IPR036291 A388_02750 A388_02751 IPR002168 Lipase, GDXG, active site A388_02751 IPR013094 Alpha/beta hydrolase fold-3 A388_02751 IPR029058 Alpha/Beta hydrolase fold A388_02752 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal A388_02752 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal A388_02752 IPR036188 A388_02752 A388_02753 IPR005318 Outer membrane porin, bacterial A388_02753 IPR023614 Porin domain A388_02754 IPR005829 Sugar transporter, conserved site A388_02754 IPR011701 Major facilitator superfamily A388_02754 IPR036259 A388_02754 A388_02755 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site A388_02755 IPR017941 Rieske [2Fe-2S] iron-sulphur domain A388_02755 IPR036922 A388_02755 A388_02756 IPR000951 Phthalate dioxygenase reductase A388_02756 IPR001041 2Fe-2S ferredoxin-type domain A388_02756 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site A388_02756 IPR012675 Beta-grasp domain A388_02756 IPR017938 Riboflavin synthase-like beta-barrel A388_02756 IPR036010 A388_02756 A388_02756 IPR039261 A388_02756 A388_02757 IPR000524 Transcription regulator HTH, GntR A388_02757 IPR008920 Transcription regulator FadR/GntR, C-terminal A388_02757 IPR011711 GntR, C-terminal A388_02757 IPR036388 A388_02757 A388_02757 IPR036390 A388_02757 A388_02758 IPR000835 MarR-type HTH domain A388_02758 IPR036388 A388_02758 A388_02758 IPR036390 A388_02758 A388_02759 IPR005829 Sugar transporter, conserved site A388_02759 IPR011701 Major facilitator superfamily A388_02759 IPR036259 A388_02759 A388_02760 IPR001753 Crotonase superfamily A388_02760 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site A388_02760 IPR029045 ClpP/crotonase-like domain A388_02761 IPR015590 Aldehyde dehydrogenase domain A388_02761 IPR016161 Aldehyde/histidinol dehydrogenase A388_02761 IPR016162 Aldehyde dehydrogenase, N-terminal A388_02761 IPR016163 Aldehyde dehydrogenase, C-terminal A388_02761 IPR029510 Aldehyde dehydrogenase, glutamic acid active site A388_02762 IPR000873 AMP-dependent synthetase/ligase A388_02763 IPR006089 Acyl-CoA dehydrogenase, conserved site A388_02763 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_02763 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_02763 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_02763 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_02763 IPR036250 A388_02763 A388_02763 IPR037069 A388_02763 A388_02764 IPR005318 Outer membrane porin, bacterial A388_02764 IPR023614 Porin domain A388_02765 IPR020915 Uncharacterised protein family UPF0311 A388_02766 IPR003736 Phenylacetic acid degradation-related domain A388_02766 IPR006683 Thioesterase superfamily A388_02766 IPR029069 HotDog domain A388_02767 IPR011118 Tannase/feruloyl esterase A388_02767 IPR029058 Alpha/Beta hydrolase fold A388_02768 IPR000524 Transcription regulator HTH, GntR A388_02768 IPR008920 Transcription regulator FadR/GntR, C-terminal A388_02768 IPR011711 GntR, C-terminal A388_02768 IPR036388 A388_02768 A388_02768 IPR036390 A388_02768 A388_02769 IPR015590 Aldehyde dehydrogenase domain A388_02769 IPR016161 Aldehyde/histidinol dehydrogenase A388_02769 IPR016162 Aldehyde dehydrogenase, N-terminal A388_02769 IPR016163 Aldehyde dehydrogenase, C-terminal A388_02770 IPR002220 DapA-like A388_02770 IPR013785 Aldolase-type TIM barrel A388_02770 IPR017655 5-dehydro-4-deoxyglucarate dehydratase A388_02771 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal A388_02771 IPR017653 Glucarate dehydratase A388_02771 IPR029017 Enolase N-terminal domain-like A388_02771 IPR029065 Enolase C-terminal domain-like A388_02771 IPR036849 A388_02771 A388_02772 IPR000849 Sugar phosphate transporter A388_02772 IPR011701 Major facilitator superfamily A388_02772 IPR036259 A388_02772 A388_02773 IPR007392 D-galactarate dehydratase/Altronate hydrolase, C-terminal A388_02773 IPR013974 SAF domain A388_02773 IPR017654 Galactarate dehydratase A388_02774 IPR000620 Drug/metabolite transporter A388_02775 IPR009057 Homeodomain-like A388_02775 IPR018060 DNA binding HTH domain, AraC-type A388_02775 IPR020449 Transcription regulator HTH, AraC- type A388_02775 IPR032687 A388_02775 A388_02776 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent A388_02776 IPR015590 Aldehyde dehydrogenase domain A388_02776 IPR016160 Aldehyde dehydrogenase, cysteine active site A388_02776 IPR016161 Aldehyde/histidinol dehydrogenase A388_02776 IPR016162 Aldehyde dehydrogenase, N-terminal A388_02776 IPR016163 Aldehyde dehydrogenase, C-terminal A388_02776 IPR029510 Aldehyde dehydrogenase, glutamic acid active site A388_02778 IPR025361 Protein of unknown function DUF4265 A388_02780 IPR002293 Amino acid/polyamine transporter I A388_02780 IPR004841 Amino acid permease/ SLC12A domain A388_02781 IPR007041 Arginine N-succinyltransferase Ast/AOST A388_02781 IPR016181 Acyl-CoA N-acyltransferase A388_02781 IPR017650 Arginine N-succinyltransferase AstA A388_02782 IPR004636 Acetylornithine/Succinylornithine transaminase family A388_02782 IPR005814 Aminotransferase class-III A388_02782 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_02782 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_02782 IPR015424 Pyridoxal phosphate-dependent transferase A388_02782 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria A388_02783 IPR000485 AsnC-type HTH domain A388_02783 IPR011008 Dimeric alpha-beta barrel A388_02783 IPR019887 Transcription regulator AsnC-type, C-terminal A388_02783 IPR019888 Transcription regulator AsnC-type A388_02783 IPR036388 A388_02783 A388_02783 IPR036390 A388_02783 A388_02784 IPR015590 Aldehyde dehydrogenase domain A388_02784 IPR016160 Aldehyde dehydrogenase, cysteine active site A388_02784 IPR016161 Aldehyde/histidinol dehydrogenase A388_02784 IPR016162 Aldehyde dehydrogenase, N-terminal A388_02784 IPR016163 Aldehyde dehydrogenase, C-terminal A388_02784 IPR029510 Aldehyde dehydrogenase, glutamic acid active site A388_02785 IPR032710 A388_02785 A388_02785 IPR037401 A388_02785 A388_02786 IPR000524 Transcription regulator HTH, GntR A388_02786 IPR008920 Transcription regulator FadR/GntR, C-terminal A388_02786 IPR011711 GntR, C-terminal A388_02786 IPR036388 A388_02786 A388_02786 IPR036390 A388_02786 A388_02787 IPR033479 A388_02787 A388_02788 IPR002293 Amino acid/polyamine transporter I A388_02788 IPR004841 Amino acid permease/ SLC12A domain A388_02789 IPR006076 FAD dependent oxidoreductase A388_02789 IPR036188 A388_02789 A388_02790 IPR002293 Amino acid/polyamine transporter I A388_02790 IPR004840 Amino acid permease, conserved site A388_02790 IPR004841 Amino acid permease/ SLC12A domain A388_02792 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02798 IPR001826 RHS protein A388_02798 IPR006530 YD repeat A388_02798 IPR022385 Rhs repeat-associated core A388_02798 IPR031325 A388_02798 A388_02799 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein A388_02799 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset A388_02799 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal A388_02799 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain A388_02799 IPR037026 A388_02799 A388_02800 IPR001647 DNA-binding HTH domain, TetR-type A388_02800 IPR009057 Homeodomain-like A388_02802 IPR004872 Lipoprotein NlpA family A388_02804 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal A388_02804 IPR013785 Aldolase-type TIM barrel A388_02804 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_02804 IPR036188 A388_02804 A388_02805 IPR001518 Argininosuccinate synthase A388_02805 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_02805 IPR018223 Argininosuccinate synthase, conserved site A388_02805 IPR023437 Argininosuccinate synthase, type 2 subfamily A388_02805 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail A388_02805 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body A388_02806 IPR000160 GGDEF domain A388_02806 IPR029787 Nucleotide cyclase A388_02807 IPR002195 Dihydroorotase, conserved site A388_02807 IPR004721 Dihydroorotase homodimeric type A388_02807 IPR006680 Amidohydrolase 1 A388_02807 IPR032466 A388_02807 A388_02808 IPR005987 Ribonuclease T A388_02808 IPR012337 Ribonuclease H-like domain A388_02808 IPR013520 Exonuclease, RNase T/DNA polymerase III A388_02808 IPR036397 A388_02808 A388_02810 IPR000531 TonB-dependent receptor, beta-barrel A388_02810 IPR010105 TonB-dependent siderophore receptor A388_02810 IPR012910 TonB-dependent receptor, plug A388_02810 IPR036942 A388_02810 A388_02810 IPR037066 A388_02810 A388_02812 IPR022385 Rhs repeat-associated core A388_02813 IPR006530 YD repeat A388_02817 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal A388_02817 IPR013785 Aldolase-type TIM barrel A388_02818 IPR003439 ABC transporter-like A388_02818 IPR003593 AAA+ ATPase domain A388_02818 IPR017871 ABC transporter, conserved site A388_02818 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02819 IPR000515 MetI-like domain A388_02819 IPR035906 A388_02819 A388_02820 IPR000515 MetI-like domain A388_02820 IPR035906 A388_02820 A388_02821 IPR000914 Bacterial extracellular solute-binding protein, family 5 A388_02821 IPR030678 A388_02821 A388_02822 IPR000189 Prokaryotic transglycosylase, active site A388_02822 IPR008258 Lytic transglycosylase-like SLT domain A388_02822 IPR018392 LysM domain A388_02822 IPR023346 Lysozyme-like domain A388_02822 IPR036779 A388_02822 A388_02823 IPR002156 Ribonuclease H domain A388_02823 IPR006054 DNA polymerase III, epsilon subunit A388_02823 IPR006309 DNA polymerase 3, epsilon subunit A388_02823 IPR012337 Ribonuclease H-like domain A388_02823 IPR013520 Exonuclease, RNase T/DNA polymerase III A388_02823 IPR022892 Ribonuclease H A388_02823 IPR036397 A388_02823 A388_02824 IPR036641 A388_02824 A388_02825 IPR000086 NUDIX hydrolase domain A388_02825 IPR015376 Zinc ribbon, NADH pyrophosphatase A388_02825 IPR015797 NUDIX hydrolase domain-like A388_02825 IPR020084 NUDIX hydrolase, conserved site A388_02826 IPR013094 Alpha/beta hydrolase fold-3 A388_02826 IPR029058 Alpha/Beta hydrolase fold A388_02827 IPR007055 BON domain A388_02828 IPR003509 Uncharacterised protein family UPF0102 A388_02828 IPR011335 Restriction endonuclease type II-like A388_02828 IPR011856 tRNA endonuclease-like domain A388_02829 IPR000878 Tetrapyrrole methylase A388_02829 IPR008189 rRNA small subunit methyltransferase I A388_02829 IPR014776 Tetrapyrrole methylase, subdomain 2 A388_02829 IPR014777 Tetrapyrrole methylase, subdomain 1 A388_02829 IPR018063 SAM-dependent methyltransferase RsmI, conserved site A388_02829 IPR035996 A388_02829 A388_02831 IPR000847 Transcription regulator HTH, LysR A388_02831 IPR005119 LysR, substrate-binding A388_02831 IPR017685 Transcription regulator ArgP A388_02831 IPR036388 A388_02831 A388_02831 IPR036390 A388_02831 A388_02832 IPR001123 Lysine-type exporter protein (LYSE/YGGA) A388_02833 IPR002524 Cation efflux protein A388_02833 IPR027469 Cation efflux protein transmembrane domain A388_02834 IPR000551 MerR-type HTH domain A388_02834 IPR009061 DNA binding domain, putative A388_02836 IPR002938 Monooxygenase, FAD-binding A388_02836 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 A388_02836 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site A388_02836 IPR036188 A388_02836 A388_02837 IPR002938 Monooxygenase, FAD-binding A388_02837 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 A388_02837 IPR036188 A388_02837 A388_02838 IPR000994 Peptidase M24, structural domain A388_02838 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site A388_02838 IPR007865 Aminopeptidase P, N-terminal A388_02838 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal A388_02838 IPR036005 A388_02838 A388_02839 IPR011978 Uncharacterised protein family UPF0149 A388_02839 IPR036255 A388_02839 A388_02841 IPR007838 Cell division protein ZapA-like A388_02841 IPR036192 A388_02841 A388_02845 IPR002698 5-formyltetrahydrofolate cyclo-ligase A388_02845 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain A388_02845 IPR037171 A388_02845 A388_02846 IPR003111 Peptidase S16, lon N-terminal A388_02846 IPR003593 AAA+ ATPase domain A388_02846 IPR003959 ATPase, AAA-type, core A388_02846 IPR004815 Lon protease, bacterial/eukaryotic-type A388_02846 IPR008268 Peptidase S16, active site A388_02846 IPR008269 Peptidase S16, Lon C-terminal A388_02846 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup A388_02846 IPR015947 PUA-like domain A388_02846 IPR020568 Ribosomal protein S5 domain 2-type fold A388_02846 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02846 IPR027543 Lon protease, bacterial A388_02847 IPR003742 SPOUT methyltransferase, predicted A388_02847 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal A388_02847 IPR029028 Alpha/beta knot methyltransferases A388_02848 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B A388_02848 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type A388_02849 IPR005184 Domain of unknown function DUF306, Meta/HslJ A388_02849 IPR025485 Domain of unknown function DUF4377 A388_02849 IPR038670 A388_02849 A388_02850 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase A388_02850 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal A388_02850 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain A388_02850 IPR014362 Glutamate dehydrogenase A388_02850 IPR033524 A388_02850 A388_02850 IPR036291 A388_02850 A388_02851 IPR007202 4Fe-4S domain A388_02851 IPR010207 Electron transport complex, RnfB A388_02851 IPR011005 Dihydropteroate synthase-like A388_02851 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site A388_02852 IPR000445 Helix-hairpin-helix motif A388_02852 IPR003265 HhH-GPD domain A388_02852 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif A388_02852 IPR004035 Endonuclease III, iron-sulphur binding site A388_02852 IPR004036 Endonuclease III-like, conserved site-2 A388_02852 IPR005759 Endonuclease III A388_02852 IPR011257 DNA glycosylase A388_02852 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal A388_02853 IPR000850 Adenylate kinase/UMP-CMP kinase A388_02853 IPR006259 Adenylate kinase subfamily A388_02853 IPR007862 Adenylate kinase, active site lid domain A388_02853 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02853 IPR033690 A388_02853 A388_02856 IPR001460 Penicillin-binding protein, transpeptidase A388_02856 IPR005311 Penicillin-binding protein, dimerisation domain A388_02856 IPR012338 Beta-lactamase/transpeptidase-like A388_02856 IPR017790 Penicillin-binding protein 2 A388_02856 IPR036138 A388_02856 A388_02857 IPR002052 DNA methylase, N-6 adenine-specific, conserved site A388_02857 IPR004398 RNA methyltransferase, RsmD A388_02857 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_02858 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein A388_02859 IPR003495 CobW/HypB/UreG domain A388_02859 IPR004400 Urease accessory protein UreG A388_02859 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase A388_02859 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02860 IPR002639 Urease accessory protein UreF A388_02860 IPR038277 A388_02860 A388_02861 IPR004029 UreE urease accessory, N-terminal A388_02861 IPR007864 Urease accessory protein UreE, C-terminal domain A388_02861 IPR012406 Urease accessory protein UreE A388_02861 IPR036118 A388_02861 A388_02861 IPR036675 A388_02861 A388_02862 IPR005848 Urease, alpha subunit A388_02862 IPR006680 Amidohydrolase 1 A388_02862 IPR011059 Metal-dependent hydrolase, composite domain A388_02862 IPR011612 Urease alpha-subunit, N-terminal domain A388_02862 IPR017950 Urease active site A388_02862 IPR029754 Urease nickel binding site A388_02862 IPR032466 A388_02862 A388_02863 IPR002019 Urease, beta subunit A388_02863 IPR036461 A388_02863 A388_02864 IPR002026 Urease, gamma/gamma-beta subunit A388_02864 IPR012010 Urease, gamma subunit A388_02864 IPR036463 A388_02864 A388_02865 IPR002669 Urease accessory protein UreD A388_02867 IPR007298 Copper resistance lipoprotein NlpE A388_02868 IPR006254 Isocitrate lyase A388_02868 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain A388_02869 IPR000847 Transcription regulator HTH, LysR A388_02869 IPR005119 LysR, substrate-binding A388_02869 IPR036388 A388_02869 A388_02869 IPR036390 A388_02869 A388_02870 IPR000644 CBS domain A388_02870 IPR002550 Domain of unknown function DUF21 A388_02870 IPR005170 Transporter-associated domain A388_02870 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 A388_02870 IPR036318 A388_02870 A388_02871 IPR004680 Citrate transporter-like domain A388_02871 IPR014738 Citrate transporter A388_02873 IPR018715 Protein of unknown function DUF2239 A388_02874 IPR000795 Elongation factor, GTP-binding domain A388_02874 IPR005225 Small GTP-binding protein domain A388_02874 IPR009000 Translation protein, beta-barrel domain A388_02874 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal A388_02874 IPR011779 Sulphate adenylyltransferase, large subunit A388_02874 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02874 IPR031157 A388_02874 A388_02875 IPR002500 Phosphoadenosine phosphosulphate reductase A388_02875 IPR011784 Sulphate adenylyltransferase, small subunit A388_02875 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_02877 IPR026950 Capsule assembly protein Wzi A388_02877 IPR038636 A388_02877 A388_02878 IPR002313 Lysine-tRNA ligase, class II A388_02878 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) A388_02878 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type A388_02878 IPR012340 Nucleic acid-binding, OB-fold A388_02878 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal A388_02879 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA A388_02879 IPR029058 Alpha/Beta hydrolase fold A388_02880 IPR013538 Activator of Hsp90 ATPase homologue 1-like A388_02880 IPR023393 START-like domain A388_02881 IPR018527 Rubredoxin, iron-binding site A388_02881 IPR024922 Rubredoxin A388_02881 IPR024935 Rubredoxin domain A388_02882 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_02882 IPR036188 A388_02882 A388_02883 IPR000073 Alpha/beta hydrolase fold-1 A388_02883 IPR029058 Alpha/Beta hydrolase fold A388_02884 IPR000847 Transcription regulator HTH, LysR A388_02884 IPR005119 LysR, substrate-binding A388_02884 IPR036388 A388_02884 A388_02884 IPR036390 A388_02884 A388_02885 IPR007730 Sporulation-related domain A388_02885 IPR036680 A388_02885 A388_02886 IPR003414 Polyphosphate kinase A388_02886 IPR024953 Polyphosphate kinase middle domain A388_02886 IPR025198 Polyphosphate kinase N-terminal domain A388_02886 IPR025200 Polyphosphate kinase C-terminal domain A388_02886 IPR036830 A388_02886 A388_02886 IPR036832 A388_02886 A388_02887 IPR001264 Glycosyl transferase, family 51 A388_02887 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase A388_02887 IPR023346 Lysozyme-like domain A388_02887 IPR036950 A388_02887 A388_02888 IPR022764 Peptidase S54, rhomboid domain A388_02888 IPR035952 A388_02888 A388_02889 IPR003838 Permease FtsX-like A388_02890 IPR003439 ABC transporter-like A388_02890 IPR003593 AAA+ ATPase domain A388_02890 IPR017871 ABC transporter, conserved site A388_02890 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02891 IPR008265 Lipase, GDSL, active site A388_02891 IPR013830 A388_02891 A388_02891 IPR036514 A388_02891 A388_02892 IPR001765 Carbonic anhydrase A388_02892 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site A388_02892 IPR036874 A388_02892 A388_02893 IPR000073 Alpha/beta hydrolase fold-1 A388_02893 IPR029058 Alpha/Beta hydrolase fold A388_02895 IPR000531 TonB-dependent receptor, beta-barrel A388_02895 IPR010105 TonB-dependent siderophore receptor A388_02895 IPR010917 TonB-dependent receptor, conserved site A388_02895 IPR012910 TonB-dependent receptor, plug A388_02895 IPR036942 A388_02895 A388_02895 IPR037066 A388_02895 A388_02896 IPR000361 FeS cluster biogenesis A388_02896 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal A388_02896 IPR017726 Fe/S biogenesis protein NfuA A388_02896 IPR034904 A388_02896 A388_02896 IPR035903 A388_02896 A388_02897 IPR022764 Peptidase S54, rhomboid domain A388_02897 IPR035952 A388_02897 A388_02898 IPR000917 Sulfatase A388_02898 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha A388_02898 IPR017850 Alkaline-phosphatase-like, core domain A388_02898 IPR024607 Sulfatase, conserved site A388_02899 IPR005532 Formylglycine-generating sulphatase enzyme domain A388_02899 IPR016187 C-type lectin fold A388_02902 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site A388_02902 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme A388_02902 IPR011780 D-serine ammonia-lyase A388_02902 IPR036052 A388_02902 A388_02903 IPR001204 Phosphate transporter A388_02904 IPR000489 Pterin-binding A388_02904 IPR003726 Homocysteine S-methyltransferase A388_02904 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain A388_02904 IPR004223 Vitamin B12-dependent methionine synthase, activation domain A388_02904 IPR006158 Cobalamin (vitamin B12)-binding domain A388_02904 IPR011005 Dihydropteroate synthase-like A388_02904 IPR011822 Cobalamin-dependent methionine synthase A388_02904 IPR036589 A388_02904 A388_02904 IPR036594 A388_02904 A388_02904 IPR036724 A388_02904 A388_02904 IPR037010 A388_02904 A388_02905 IPR005475 Transketolase-like, pyrimidine-binding domain A388_02905 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II A388_02905 IPR029061 Thiamin diphosphate-binding fold A388_02905 IPR033248 A388_02905 A388_02906 IPR005474 Transketolase, N-terminal A388_02906 IPR029061 Thiamin diphosphate-binding fold A388_02907 IPR011701 Major facilitator superfamily A388_02907 IPR036259 A388_02907 A388_02908 IPR002347 Glucose/ribitol dehydrogenase A388_02908 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_02908 IPR036291 A388_02908 A388_02909 IPR000847 Transcription regulator HTH, LysR A388_02909 IPR005119 LysR, substrate-binding A388_02909 IPR036388 A388_02909 A388_02909 IPR036390 A388_02909 A388_02911 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase A388_02911 IPR011013 Galactose mutarotase-like domain A388_02911 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup A388_02911 IPR015443 Aldose 1-epimerase A388_02911 IPR018052 Aldose 1-epimerase, conserved site A388_02912 IPR011701 Major facilitator superfamily A388_02912 IPR036259 A388_02912 A388_02913 IPR009057 Homeodomain-like A388_02913 IPR011051 RmlC-like cupin domain A388_02913 IPR014710 RmlC-like jelly roll fold A388_02913 IPR018060 DNA binding HTH domain, AraC-type A388_02913 IPR018062 HTH domain AraC-type, conserved site A388_02913 IPR020449 Transcription regulator HTH, AraC- type A388_02914 IPR012338 Beta-lactamase/transpeptidase-like A388_02914 IPR015868 Glutaminase A388_02914 IPR036513 A388_02914 A388_02915 IPR023635 Peptide deformylase A388_02915 IPR036821 A388_02915 A388_02916 IPR011701 Major facilitator superfamily A388_02916 IPR036259 A388_02916 A388_02918 IPR000399 TPP-binding enzyme, conserved site A388_02918 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding A388_02918 IPR012000 Thiamine pyrophosphate enzyme, central domain A388_02918 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain A388_02918 IPR029035 DHS-like NAD/FAD-binding domain A388_02918 IPR029061 Thiamin diphosphate-binding fold A388_02919 IPR015590 Aldehyde dehydrogenase domain A388_02919 IPR016160 Aldehyde dehydrogenase, cysteine active site A388_02919 IPR016161 Aldehyde/histidinol dehydrogenase A388_02919 IPR016162 Aldehyde dehydrogenase, N-terminal A388_02919 IPR016163 Aldehyde dehydrogenase, C-terminal A388_02919 IPR029510 Aldehyde dehydrogenase, glutamic acid active site A388_02920 IPR002811 Aspartate dehydrogenase A388_02920 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding A388_02920 IPR011182 L-aspartate dehydrogenase A388_02920 IPR020626 L-aspartate dehydrogenase, prokaryotic A388_02920 IPR036291 A388_02920 A388_02921 IPR002347 Glucose/ribitol dehydrogenase A388_02921 IPR036291 A388_02921 A388_02922 IPR000073 Alpha/beta hydrolase fold-1 A388_02922 IPR029058 Alpha/Beta hydrolase fold A388_02923 IPR011051 RmlC-like cupin domain A388_02923 IPR013096 Cupin 2, conserved barrel A388_02923 IPR014710 RmlC-like jelly roll fold A388_02924 IPR005829 Sugar transporter, conserved site A388_02924 IPR011701 Major facilitator superfamily A388_02924 IPR036259 A388_02924 A388_02925 IPR016156 FAD/NAD-linked reductase, dimerisation domain A388_02925 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_02925 IPR028202 Reductase, C-terminal A388_02925 IPR036188 A388_02925 A388_02926 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain A388_02926 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase A388_02927 IPR002347 Glucose/ribitol dehydrogenase A388_02927 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_02927 IPR036291 A388_02927 A388_02928 IPR017941 Rieske [2Fe-2S] iron-sulphur domain A388_02928 IPR036922 A388_02928 A388_02930 IPR017941 Rieske [2Fe-2S] iron-sulphur domain A388_02930 IPR036922 A388_02930 A388_02931 IPR005471 Transcription regulator IclR, N-terminal A388_02931 IPR014757 Transcription regulator IclR, C-terminal A388_02931 IPR029016 GAF domain-like A388_02931 IPR036388 A388_02931 A388_02931 IPR036390 A388_02931 A388_02933 IPR006419 Nicotinamide mononucleotide transporter PnuC A388_02934 IPR001753 Crotonase superfamily A388_02934 IPR014748 Crontonase, C-terminal A388_02934 IPR029045 ClpP/crotonase-like domain A388_02935 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD A388_02936 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA A388_02936 IPR029044 Nucleotide-diphospho-sugar transferases A388_02937 IPR002509 Polysaccharide deacetylase A388_02937 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel A388_02937 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB A388_02937 IPR032772 A388_02937 A388_02938 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain A388_02939 IPR009822 YaeQ A388_02939 IPR011335 Restriction endonuclease type II-like A388_02939 IPR038590 A388_02939 A388_02940 IPR001991 Sodium:dicarboxylate symporter A388_02940 IPR018107 Sodium:dicarboxylate symporter, conserved site A388_02940 IPR036458 A388_02940 A388_02941 IPR003495 CobW/HypB/UreG domain A388_02941 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02943 IPR003736 Phenylacetic acid degradation-related domain A388_02943 IPR006683 Thioesterase superfamily A388_02943 IPR029069 HotDog domain A388_02944 IPR002771 Multiple antibiotic resistance (MarC)-related A388_02945 IPR000060 BCCT transporter family A388_02945 IPR018093 BCCT transporter, conserved site A388_02946 IPR000060 BCCT transporter family A388_02946 IPR018093 BCCT transporter, conserved site A388_02947 IPR001647 DNA-binding HTH domain, TetR-type A388_02947 IPR009057 Homeodomain-like A388_02947 IPR017757 Transcriptional repressor BetI A388_02947 IPR023772 DNA-binding HTH domain, TetR-type, conserved site A388_02947 IPR036271 A388_02947 A388_02947 IPR039538 A388_02947 A388_02948 IPR011264 NAD/NADP-dependent betaine aldehyde dehydrogenase A388_02948 IPR015590 Aldehyde dehydrogenase domain A388_02948 IPR016160 Aldehyde dehydrogenase, cysteine active site A388_02948 IPR016161 Aldehyde/histidinol dehydrogenase A388_02948 IPR016162 Aldehyde dehydrogenase, N-terminal A388_02948 IPR016163 Aldehyde dehydrogenase, C-terminal A388_02948 IPR029510 Aldehyde dehydrogenase, glutamic acid active site A388_02949 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal A388_02949 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal A388_02949 IPR011533 Oxygen-dependent choline dehydrogenase A388_02949 IPR012132 Glucose-methanol-choline oxidoreductase A388_02949 IPR027424 Glucose Oxidase, domain 2 A388_02949 IPR036188 A388_02949 A388_02950 IPR006231 Malate:quinone-oxidoreductase A388_02950 IPR036188 A388_02950 A388_02952 IPR003726 Homocysteine S-methyltransferase A388_02952 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT A388_02952 IPR036589 A388_02952 A388_02953 IPR002293 Amino acid/polyamine transporter I A388_02953 IPR004754 Amino acid antiporter A388_02954 IPR000073 Alpha/beta hydrolase fold-1 A388_02954 IPR029058 Alpha/Beta hydrolase fold A388_02955 IPR010699 Protein of unknown function DUF1275 A388_02957 IPR000847 Transcription regulator HTH, LysR A388_02957 IPR005119 LysR, substrate-binding A388_02957 IPR036388 A388_02957 A388_02957 IPR036390 A388_02957 A388_02958 IPR002220 DapA-like A388_02958 IPR013785 Aldolase-type TIM barrel A388_02959 IPR005828 General substrate transporter A388_02959 IPR005829 Sugar transporter, conserved site A388_02959 IPR036259 A388_02959 A388_02960 IPR005318 Outer membrane porin, bacterial A388_02960 IPR023614 Porin domain A388_02961 IPR023614 Porin domain A388_02964 IPR001130 TatD family A388_02964 IPR018228 Deoxyribonuclease, TatD-related, conserved site A388_02964 IPR032466 A388_02964 A388_02965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_02965 IPR018317 Queuosine biosynthesis protein QueC A388_02967 IPR011646 KAP P-loop A388_02967 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02970 IPR007358 Nucleoid-associated protein NdpA A388_02972 IPR000424 Primosome PriB/single-strand DNA-binding A388_02972 IPR012340 Nucleic acid-binding, OB-fold A388_02973 IPR009270 Domain of unknown function DUF927 A388_02978 IPR003497 BRO N-terminal domain A388_02982 IPR002104 Integrase, catalytic A388_02982 IPR010998 Integrase, Lambda-type, N-terminal A388_02982 IPR011010 DNA breaking-rejoining enzyme, catalytic core A388_02982 IPR013762 Integrase-like, catalytic core A388_02982 IPR025166 Domain of unknown function DUF4102 A388_02982 IPR038488 A388_02982 A388_02984 IPR000101 Gamma-glutamyltranspeptidase A388_02984 IPR029055 Nucleophile aminohydrolases, N-terminal A388_02985 IPR004638 Drug resistance transporter EmrB/QacA subfamily A388_02985 IPR011701 Major facilitator superfamily A388_02985 IPR036259 A388_02985 A388_02986 IPR003997 RTX secretion protein D, Gram-negative bacteria A388_02986 IPR005694 Efflux pump membrane protein Emr A388_02986 IPR006143 RND efflux pump, membrane fusion protein A388_02986 IPR032317 A388_02986 A388_02987 IPR003736 Phenylacetic acid degradation-related domain A388_02987 IPR006683 Thioesterase superfamily A388_02987 IPR029069 HotDog domain A388_02988 IPR001731 Porphobilinogen synthase A388_02988 IPR013785 Aldolase-type TIM barrel A388_02988 IPR030656 A388_02988 A388_02989 IPR006076 FAD dependent oxidoreductase A388_02989 IPR036188 A388_02989 A388_02990 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain A388_02990 IPR010099 Sugar nucleotide epimerase YfcH,-like putative A388_02990 IPR013549 Domain of unknown function DUF1731 A388_02990 IPR036291 A388_02990 A388_02992 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase A388_02993 IPR003718 OsmC/Ohr family A388_02993 IPR015946 K homology domain-like, alpha/beta A388_02993 IPR036102 A388_02993 A388_02994 IPR004593 Nuclease SbcCD subunit D A388_02994 IPR004843 Calcineurin-like phosphoesterase domain, apaH type A388_02994 IPR026843 Nuclease SbcCD subunit D, C-terminal domain A388_02994 IPR029052 Metallo-dependent phosphatase-like A388_02995 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02995 IPR038729 A388_02995 A388_02996 IPR001608 Alanine racemase, N-terminal A388_02996 IPR011078 Uncharacterised protein family UPF0001 A388_02996 IPR029066 PLP-binding barrel A388_02997 IPR001482 Type II secretion system protein E A388_02997 IPR003593 AAA+ ATPase domain A388_02997 IPR006321 Pilus retraction protein PilT A388_02997 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02998 IPR001482 Type II secretion system protein E A388_02998 IPR006321 Pilus retraction protein PilT A388_02998 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_02999 IPR002481 Ferric-uptake regulator A388_02999 IPR036388 A388_02999 A388_02999 IPR036390 A388_02999 A388_03000 IPR007450 Lipoprotein SmpA/OmlA A388_03000 IPR026592 Outer membrane protein assembly factor BamE A388_03000 IPR037873 A388_03000 A388_03001 IPR005346 RnfH protein A388_03001 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp A388_03001 IPR037021 A388_03001 A388_03002 IPR037272 A388_03002 A388_03003 IPR012312 Haemerythrin/HHE cation-binding motif A388_03003 IPR012827 Haemerythrin-like, metal-binding domain A388_03003 IPR035938 A388_03003 A388_03004 IPR026869 Putative glutamine amidotransferase type 2 A388_03004 IPR029055 Nucleophile aminohydrolases, N-terminal A388_03005 IPR016181 Acyl-CoA N-acyltransferase A388_03006 IPR001048 Aspartate/glutamate/uridylate kinase A388_03006 IPR004662 Acetylglutamate kinase A388_03006 IPR036393 A388_03006 A388_03006 IPR037528 A388_03006 A388_03007 IPR005841 Alpha-D-phosphohexomutase superfamily A388_03007 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I A388_03007 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II A388_03007 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III A388_03007 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III A388_03007 IPR016066 Alpha-D-phosphohexomutase, conserved site A388_03007 IPR036900 A388_03007 A388_03008 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase A388_03008 IPR029054 dUTPase-like A388_03008 IPR036157 A388_03008 A388_03009 IPR005752 DNA helicase, ATP-dependent, RepA type A388_03009 IPR013986 DExx box DNA helicase domain A388_03009 IPR014017 DNA helicase, UvrD-like, C-terminal A388_03009 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03009 IPR034739 A388_03009 A388_03010 IPR006664 Outer membrane protein, bacterial A388_03010 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal A388_03010 IPR006690 Outer membrane protein, OmpA-like, conserved site A388_03010 IPR036737 A388_03010 A388_03011 IPR002123 Phospholipid/glycerol acyltransferase A388_03013 IPR005526 Septum formation inhibitor MinC, C-terminal A388_03013 IPR013033 Septum formation inhibitor MinC A388_03013 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal A388_03013 IPR036145 A388_03013 A388_03014 IPR010223 ATP binding protein MinD, bacterial-type A388_03014 IPR025501 ATP binding protein MinD A388_03014 IPR025669 AAA domain A388_03014 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03015 IPR005527 Septum formation topological specificity factor MinE A388_03015 IPR036707 A388_03015 A388_03017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) A388_03017 IPR004778 Homoserine/Threonine efflux protein A388_03018 IPR002543 FtsK domain A388_03018 IPR018541 FtsK gamma domain A388_03018 IPR025199 Domain of unknown function DUF4117 A388_03018 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03018 IPR036388 A388_03018 A388_03018 IPR036390 A388_03018 A388_03019 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II A388_03019 IPR005982 Thioredoxin reductase A388_03019 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site A388_03019 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain A388_03019 IPR036188 A388_03019 A388_03020 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase A388_03020 IPR016181 Acyl-CoA N-acyltransferase A388_03021 IPR007471 Arginine-tRNA-protein transferase, N-terminal A388_03021 IPR007472 Arginine-tRNA-protein transferase, C-terminal A388_03021 IPR016181 Acyl-CoA N-acyltransferase A388_03021 IPR017138 Arginine-tRNA-protein transferase, predicted, prokaryotic A388_03022 IPR000182 GNAT domain A388_03022 IPR006464 Ribosomal-protein-alanine acetyltransferase A388_03022 IPR016181 Acyl-CoA N-acyltransferase A388_03023 IPR000726 Glycoside hydrolase, family 19, catalytic A388_03023 IPR016516 Uncharacterised conserved protein UCP07580 A388_03024 IPR016516 Uncharacterised conserved protein UCP07580 A388_03025 IPR000795 Elongation factor, GTP-binding domain A388_03025 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal A388_03025 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 A388_03025 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle A388_03025 IPR005225 Small GTP-binding protein domain A388_03025 IPR009000 Translation protein, beta-barrel domain A388_03025 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal A388_03025 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03025 IPR031157 A388_03025 A388_03026 IPR000640 Translation elongation factor EFG, V domain A388_03026 IPR000795 Elongation factor, GTP-binding domain A388_03026 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 A388_03026 IPR004540 Translation elongation factor EFG/EF2 A388_03026 IPR005225 Small GTP-binding protein domain A388_03026 IPR005517 Translation elongation factor EFG/EF2, domain IV A388_03026 IPR009000 Translation protein, beta-barrel domain A388_03026 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup A388_03026 IPR020568 Ribosomal protein S5 domain 2-type fold A388_03026 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03026 IPR031157 A388_03026 A388_03026 IPR035647 A388_03026 A388_03027 IPR000235 Ribosomal protein S5/S7 A388_03027 IPR005717 Ribosomal protein S7, bacterial/organellar-type A388_03027 IPR020606 Ribosomal protein S7, conserved site A388_03027 IPR023798 Ribosomal protein S7 domain A388_03027 IPR036823 A388_03027 A388_03028 IPR005679 Ribosomal protein S12, bacteria A388_03028 IPR006032 Ribosomal protein S12/S23 A388_03028 IPR012340 Nucleic acid-binding, OB-fold A388_03029 IPR024787 EcsC protein A388_03030 IPR014030 Beta-ketoacyl synthase, N-terminal A388_03030 IPR014031 Beta-ketoacyl synthase, C-terminal A388_03030 IPR016039 Thiolase-like A388_03030 IPR018201 Beta-ketoacyl synthase, active site A388_03030 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain A388_03031 IPR005265 Uncharacterised protein family UPF0093 A388_03032 IPR003829 Pirin, N-terminal domain A388_03032 IPR008778 Pirin, C-terminal domain A388_03032 IPR011051 RmlC-like cupin domain A388_03032 IPR012093 Pirin A388_03032 IPR014710 RmlC-like jelly roll fold A388_03034 IPR003010 Carbon-nitrogen hydrolase A388_03034 IPR003694 NAD(+) synthetase A388_03034 IPR014445 Glutamine-dependent NAD(+) synthetase A388_03034 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_03034 IPR022310 NAD/GMP synthase A388_03034 IPR036526 A388_03034 A388_03037 IPR000951 Phthalate dioxygenase reductase A388_03037 IPR001041 2Fe-2S ferredoxin-type domain A388_03037 IPR001433 Oxidoreductase FAD/NAD(P)-binding A388_03037 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site A388_03037 IPR008333 Oxidoreductase, FAD-binding domain A388_03037 IPR012675 Beta-grasp domain A388_03037 IPR017938 Riboflavin synthase-like beta-barrel A388_03037 IPR036010 A388_03037 A388_03037 IPR039003 A388_03037 A388_03037 IPR039261 A388_03037 A388_03038 IPR010102 Succinate semialdehyde dehydrogenase A388_03038 IPR015590 Aldehyde dehydrogenase domain A388_03038 IPR016160 Aldehyde dehydrogenase, cysteine active site A388_03038 IPR016161 Aldehyde/histidinol dehydrogenase A388_03038 IPR016162 Aldehyde dehydrogenase, N-terminal A388_03038 IPR016163 Aldehyde dehydrogenase, C-terminal A388_03038 IPR029510 Aldehyde dehydrogenase, glutamic acid active site A388_03039 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit A388_03039 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain A388_03039 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site A388_03039 IPR017941 Rieske [2Fe-2S] iron-sulphur domain A388_03039 IPR036922 A388_03039 A388_03039 IPR039004 A388_03039 A388_03040 IPR013094 Alpha/beta hydrolase fold-3 A388_03040 IPR029058 Alpha/Beta hydrolase fold A388_03040 IPR033140 A388_03040 A388_03041 IPR000060 BCCT transporter family A388_03042 IPR011829 Tartrate dehydrogenase A388_03042 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site A388_03042 IPR024084 Isopropylmalate dehydrogenase-like domain A388_03043 IPR000847 Transcription regulator HTH, LysR A388_03043 IPR005119 LysR, substrate-binding A388_03043 IPR036388 A388_03043 A388_03043 IPR036390 A388_03043 A388_03044 IPR010870 Phosphate-selective porin O/P A388_03046 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain A388_03046 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site A388_03047 IPR001980 Coenzyme A biosynthesis protein A388_03047 IPR004821 Cytidyltransferase-like domain A388_03047 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_03048 IPR000037 SsrA-binding protein A388_03048 IPR020081 SsrA-binding protein, conserved site A388_03048 IPR023620 Small protein B A388_03049 IPR001226 Flavodoxin, conserved site A388_03049 IPR005025 NADPH-dependent FMN reductase-like A388_03049 IPR029039 Flavoprotein-like A388_03050 IPR003730 Multi-copper polyphenol oxidoreductase, laccase A388_03050 IPR011324 Cytotoxic necrotizing factor-like, catalytic A388_03050 IPR038371 A388_03050 A388_03051 IPR002942 RNA-binding S4 domain A388_03051 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F A388_03051 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site A388_03051 IPR006225 Pseudouridine synthase, RluC/RluD A388_03051 IPR020103 Pseudouridine synthase, catalytic domain A388_03051 IPR036986 A388_03051 A388_03052 IPR011990 Tetratricopeptide-like helical domain A388_03052 IPR017689 Outer membrane protein assembly factor BamD A388_03052 IPR039565 A388_03052 A388_03053 IPR002694 Zinc finger, CHC2-type A388_03053 IPR006171 Toprim domain A388_03053 IPR013264 DNA primase, catalytic core, N-terminal A388_03053 IPR019475 DNA primase, DnaB-helicase binding domain A388_03053 IPR030846 A388_03053 A388_03053 IPR036977 A388_03053 A388_03053 IPR037068 A388_03053 A388_03054 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase A388_03054 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase A388_03054 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal A388_03054 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain A388_03054 IPR018214 Glutamyl-tRNA reductase, conserved site A388_03054 IPR036291 A388_03054 A388_03054 IPR036343 A388_03054 A388_03054 IPR036453 A388_03054 A388_03055 IPR011990 Tetratricopeptide-like helical domain A388_03055 IPR019734 Tetratricopeptide repeat A388_03056 IPR004565 Outer membrane lipoprotein LolB A388_03056 IPR029046 Lipoprotein localisation LolA/LolB/LppX A388_03061 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site A388_03061 IPR005946 Ribose-phosphate diphosphokinase A388_03061 IPR029057 Phosphoribosyltransferase-like A388_03061 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain A388_03061 IPR037515 A388_03061 A388_03062 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain A388_03062 IPR020055 Ribosomal protein L25, short-form A388_03062 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain A388_03062 IPR029751 Ribosomal protein L25 A388_03063 IPR001328 Peptidyl-tRNA hydrolase A388_03063 IPR018171 Peptidyl-tRNA hydrolase, conserved site A388_03063 IPR036416 A388_03063 A388_03064 IPR003190 Aspartate decarboxylase A388_03064 IPR009010 Aspartate decarboxylase-like domain A388_03065 IPR025833 GDYXXLXY protein A388_03066 IPR018677 Protein of unknown function DUF2157, membrane A388_03066 IPR025513 Domain of unknown function DUF4401 A388_03067 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB A388_03067 IPR017945 DHBP synthase RibB-like alpha/beta domain A388_03068 IPR006439 HAD hydrolase, subfamily IA A388_03068 IPR023198 Phosphoglycolate phosphatase, domain 2 A388_03068 IPR023214 HAD-like domain A388_03068 IPR036412 A388_03068 A388_03069 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase A388_03069 IPR029056 Ribokinase-like A388_03070 IPR007055 BON domain A388_03070 IPR018392 LysM domain A388_03070 IPR036779 A388_03070 A388_03071 IPR003231 Acyl carrier protein (ACP) A388_03071 IPR006162 Phosphopantetheine attachment site A388_03071 IPR009081 Acyl carrier protein-like A388_03071 IPR036736 A388_03071 A388_03072 IPR002347 Glucose/ribitol dehydrogenase A388_03072 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase A388_03072 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_03072 IPR036291 A388_03072 A388_03073 IPR001227 Acyl transferase domain A388_03073 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type A388_03073 IPR014043 Acyl transferase A388_03073 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase A388_03073 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding A388_03073 IPR020801 Polyketide synthase, acyl transferase domain A388_03073 IPR024925 Malonyl CoA-acyl carrier protein transacylase A388_03074 IPR002677 Ribosomal protein L32p A388_03074 IPR011332 Zinc-binding ribosomal protein A388_03075 IPR003772 Protein of unknown function DUF177 A388_03076 IPR007411 Protein of unknown function DUF462 A388_03077 IPR006070 YrdC-like domain A388_03077 IPR017945 DHBP synthase RibB-like alpha/beta domain A388_03078 IPR003768 Prokaryotic chromosome segregation/condensation protein ScpA A388_03079 IPR005234 Chromosome segregation/condensation protein ScpB A388_03079 IPR036388 A388_03079 A388_03079 IPR036390 A388_03079 A388_03080 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F A388_03080 IPR002942 RNA-binding S4 domain A388_03080 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F A388_03080 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site A388_03080 IPR020103 Pseudouridine synthase, catalytic domain A388_03080 IPR036986 A388_03080 A388_03081 IPR004472 Dethiobiotin synthase BioD A388_03081 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03082 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC A388_03082 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_03083 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site A388_03083 IPR004839 Aminotransferase, class I/classII A388_03083 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_03083 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_03083 IPR015424 Pyridoxal phosphate-dependent transferase A388_03084 IPR005814 Aminotransferase class-III A388_03084 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA A388_03084 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_03084 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_03084 IPR015424 Pyridoxal phosphate-dependent transferase A388_03085 IPR000073 Alpha/beta hydrolase fold-1 A388_03085 IPR029058 Alpha/Beta hydrolase fold A388_03086 IPR003337 Trehalose-phosphatase A388_03086 IPR006379 HAD-superfamily hydrolase, subfamily IIB A388_03086 IPR023214 HAD-like domain A388_03086 IPR036412 A388_03086 A388_03087 IPR001830 Glycosyl transferase, family 20 A388_03088 IPR011701 Major facilitator superfamily A388_03088 IPR036259 A388_03088 A388_03089 IPR002024 Bacterioferritin A388_03089 IPR008331 Ferritin/DPS protein domain A388_03089 IPR009078 Ferritin-like superfamily A388_03089 IPR012347 Ferritin-related A388_03090 IPR001357 BRCT domain A388_03090 IPR001679 NAD-dependent DNA ligase A388_03090 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 A388_03090 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type A388_03090 IPR004150 NAD-dependent DNA ligase, OB-fold A388_03090 IPR010994 RuvA domain 2-like A388_03090 IPR012340 Nucleic acid-binding, OB-fold A388_03090 IPR013839 NAD-dependent DNA ligase, adenylation A388_03090 IPR013840 NAD-dependent DNA ligase, N-terminal A388_03090 IPR018239 NAD-dependent DNA ligase, active site A388_03090 IPR033136 A388_03090 A388_03090 IPR036420 A388_03090 A388_03091 IPR007449 ZipA, C-terminal FtsZ-binding domain A388_03091 IPR036765 A388_03091 A388_03092 IPR003395 RecF/RecN/SMC, N-terminal A388_03092 IPR011890 Structural maintenance of chromosomes protein, prokaryotic A388_03092 IPR024704 Structural maintenance of chromosomes protein A388_03092 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03092 IPR036277 A388_03092 A388_03093 IPR000524 Transcription regulator HTH, GntR A388_03093 IPR008920 Transcription regulator FadR/GntR, C-terminal A388_03093 IPR011711 GntR, C-terminal A388_03093 IPR036388 A388_03093 A388_03093 IPR036390 A388_03093 A388_03094 IPR002781 Transmembrane protein TauE like A388_03095 IPR004143 Biotin/lipoate A/B protein ligase A388_03095 IPR004408 Biotin--acetyl-CoA-carboxylase ligase A388_03096 IPR004619 Type III pantothenate kinase A388_03097 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain A388_03097 IPR003593 AAA+ ATPase domain A388_03097 IPR004125 Signal recognition particle, SRP54 subunit, M-domain A388_03097 IPR004780 Signal recognition particle protein Ffh A388_03097 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle A388_03097 IPR022941 Signal recognition particle, SRP54 subunit A388_03097 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03097 IPR036891 A388_03097 A388_03098 IPR002541 Cytochrome c assembly protein A388_03099 IPR001269 tRNA-dihydrouridine synthase A388_03099 IPR013785 Aldolase-type TIM barrel A388_03099 IPR018517 tRNA-dihydrouridine synthase, conserved site A388_03099 IPR032886 A388_03099 A388_03105 IPR011962 Deoxycytidine triphosphate deaminase A388_03105 IPR029054 dUTPase-like A388_03105 IPR036157 A388_03105 A388_03106 IPR001123 Lysine-type exporter protein (LYSE/YGGA) A388_03107 IPR018639 Domain of unknown function DUF2062 A388_03108 IPR000845 Nucleoside phosphorylase domain A388_03108 IPR035994 A388_03108 A388_03109 IPR000808 Mrp, conserved site A388_03109 IPR019591 Mrp/NBP35 ATP-binding protein A388_03109 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03109 IPR033756 A388_03109 A388_03111 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site A388_03111 IPR002547 tRNA-binding domain A388_03111 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal A388_03111 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding A388_03111 IPR012340 Nucleic acid-binding, OB-fold A388_03111 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding A388_03111 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_03111 IPR014758 Methionyl-tRNA synthetase A388_03111 IPR015413 Methionyl/Leucyl tRNA synthetase A388_03111 IPR023458 Methionine-tRNA ligase, type 1 A388_03111 IPR029038 Methionyl-tRNA synthetase, Zn-domain A388_03111 IPR033911 A388_03111 A388_03113 IPR001123 Lysine-type exporter protein (LYSE/YGGA) A388_03114 IPR001647 DNA-binding HTH domain, TetR-type A388_03114 IPR009057 Homeodomain-like A388_03114 IPR036271 A388_03114 A388_03115 IPR011701 Major facilitator superfamily A388_03115 IPR036259 A388_03115 A388_03116 IPR003997 RTX secretion protein D, Gram-negative bacteria A388_03116 IPR039562 A388_03116 A388_03117 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme A388_03117 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase A388_03117 IPR036052 A388_03117 A388_03118 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like A388_03118 IPR023166 HI0933 insert-like domain A388_03118 IPR036188 A388_03118 A388_03120 IPR008910 Conserved TM helix A388_03123 IPR001221 Phenol hydroxylase reductase A388_03123 IPR001433 Oxidoreductase FAD/NAD(P)-binding A388_03123 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase A388_03123 IPR008333 Oxidoreductase, FAD-binding domain A388_03123 IPR017938 Riboflavin synthase-like beta-barrel A388_03123 IPR039261 A388_03123 A388_03124 IPR000847 Transcription regulator HTH, LysR A388_03124 IPR005119 LysR, substrate-binding A388_03124 IPR036388 A388_03124 A388_03124 IPR036390 A388_03124 A388_03125 IPR008613 Excalibur calcium-binding domain A388_03126 IPR002059 Cold-shock protein, DNA-binding A388_03126 IPR011129 Cold shock protein A388_03126 IPR012156 Cold shock, CspA A388_03126 IPR012340 Nucleic acid-binding, OB-fold A388_03127 IPR005765 Uracil phosphoribosyl transferase A388_03127 IPR029057 Phosphoribosyltransferase-like A388_03127 IPR034332 A388_03127 A388_03128 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase A388_03128 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 A388_03129 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase A388_03129 IPR003918 NADH:ubiquinone oxidoreductase A388_03129 IPR010227 NADH-quinone oxidoreductase, chain M/4 A388_03130 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal A388_03130 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase A388_03130 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 A388_03130 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup A388_03131 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K A388_03131 IPR039428 A388_03131 A388_03132 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 A388_03133 IPR010226 NADH-quinone oxidoreductase, chain I A388_03133 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain A388_03133 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site A388_03134 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H A388_03134 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site A388_03135 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site A388_03135 IPR006656 Molybdopterin oxidoreductase A388_03135 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain A388_03135 IPR009010 Aspartate decarboxylase-like domain A388_03135 IPR010228 NADH:ubiquinone oxidoreductase, subunit G A388_03135 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding A388_03135 IPR036010 A388_03135 A388_03136 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site A388_03136 IPR011537 NADH ubiquinone oxidoreductase, F subunit A388_03136 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit A388_03136 IPR019554 Soluble ligand binding domain A388_03136 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding A388_03136 IPR037207 A388_03136 A388_03136 IPR037225 A388_03136 A388_03137 IPR002023 NADH-quinone oxidoreductase subunit E-like A388_03137 IPR036249 A388_03137 A388_03138 IPR001135 NADH-quinone oxidoreductase, subunit D A388_03138 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit A388_03138 IPR010218 NADH dehydrogenase, subunit C A388_03138 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site A388_03138 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site A388_03138 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H A388_03138 IPR023062 NADH dehydrogenase, subunit CD A388_03138 IPR029014 NiFe hydrogenase-like A388_03138 IPR037232 A388_03138 A388_03138 IPR038290 A388_03138 A388_03139 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit A388_03139 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit A388_03140 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 A388_03140 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid A388_03140 IPR038430 A388_03140 A388_03141 IPR000160 GGDEF domain A388_03141 IPR029787 Nucleotide cyclase A388_03143 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_03143 IPR003660 HAMP linker domain A388_03143 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain A388_03143 IPR004358 Signal transduction histidine kinase-related protein, C-terminal A388_03143 IPR036097 A388_03143 A388_03143 IPR036890 A388_03143 A388_03144 IPR001789 Signal transduction response regulator, receiver domain A388_03144 IPR001867 Signal transduction response regulator, C-terminal A388_03144 IPR011006 CheY-like superfamily A388_03144 IPR016032 Signal transduction response regulator, C-terminal effector A388_03144 IPR036388 A388_03144 A388_03145 IPR000788 Ribonucleotide reductase large subunit, C-terminal A388_03145 IPR005144 ATP-cone A388_03145 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal A388_03145 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent A388_03145 IPR013346 Ribonucleotide reductase, class I , alpha subunit A388_03145 IPR013509 Ribonucleotide reductase large subunit, N-terminal A388_03147 IPR000358 Ribonucleotide reductase small subunit A388_03147 IPR009078 Ferritin-like superfamily A388_03147 IPR012348 Ribonucleotide reductase-related A388_03149 IPR003719 Phenazine biosynthesis PhzF protein A388_03150 IPR000847 Transcription regulator HTH, LysR A388_03150 IPR005119 LysR, substrate-binding A388_03150 IPR036388 A388_03150 A388_03150 IPR036390 A388_03150 A388_03151 IPR025668 Transposase DDE domain A388_03156 IPR001647 DNA-binding HTH domain, TetR-type A388_03156 IPR009057 Homeodomain-like A388_03157 IPR002563 Flavin reductase-like, FMN-binding A388_03157 IPR012349 FMN-binding split barrel A388_03158 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal A388_03158 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit A388_03158 IPR038071 A388_03158 A388_03159 IPR015004 Protein of unknown function DUF1852 A388_03160 IPR000847 Transcription regulator HTH, LysR A388_03160 IPR005119 LysR, substrate-binding A388_03160 IPR036388 A388_03160 A388_03160 IPR036390 A388_03160 A388_03161 IPR001123 Lysine-type exporter protein (LYSE/YGGA) A388_03163 IPR009057 Homeodomain-like A388_03163 IPR018060 DNA binding HTH domain, AraC-type A388_03163 IPR020449 Transcription regulator HTH, AraC- type A388_03163 IPR032687 A388_03163 A388_03164 IPR002933 Peptidase M20 A388_03164 IPR011650 Peptidase M20, dimerisation domain A388_03164 IPR017439 Amidohydrolase A388_03164 IPR036264 A388_03164 A388_03166 IPR000847 Transcription regulator HTH, LysR A388_03166 IPR005119 LysR, substrate-binding A388_03166 IPR036388 A388_03166 A388_03166 IPR036390 A388_03166 A388_03167 IPR005829 Sugar transporter, conserved site A388_03167 IPR011701 Major facilitator superfamily A388_03167 IPR036259 A388_03167 A388_03169 IPR000847 Transcription regulator HTH, LysR A388_03169 IPR005119 LysR, substrate-binding A388_03169 IPR036388 A388_03169 A388_03169 IPR036390 A388_03169 A388_03170 IPR003953 FAD binding domain A388_03170 IPR012831 Precorrin 3B synthase CobZ A388_03170 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain A388_03170 IPR036188 A388_03170 A388_03171 IPR009051 Alpha-helical ferredoxin A388_03171 IPR012830 Citrate utilization protein B A388_03171 IPR036197 A388_03171 A388_03172 IPR003673 CoA-transferase family III A388_03172 IPR023606 CoA-transferase family III domain A388_03173 IPR011701 Major facilitator superfamily A388_03173 IPR036259 A388_03173 A388_03174 IPR006089 Acyl-CoA dehydrogenase, conserved site A388_03174 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_03174 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal A388_03174 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_03174 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_03174 IPR036250 A388_03174 A388_03174 IPR037069 A388_03174 A388_03175 IPR000847 Transcription regulator HTH, LysR A388_03175 IPR005119 LysR, substrate-binding A388_03175 IPR036388 A388_03175 A388_03175 IPR036390 A388_03175 A388_03176 IPR011032 GroES (chaperonin 10)-like A388_03176 IPR013149 Alcohol dehydrogenase, C-terminal A388_03176 IPR013154 Alcohol dehydrogenase GroES-like A388_03176 IPR036291 A388_03176 A388_03177 IPR001365 Adenosine/AMP deaminase domain A388_03177 IPR006330 Adenosine/adenine deaminase A388_03177 IPR028893 Adenosine deaminase A388_03177 IPR032466 A388_03177 A388_03182 IPR003473 Quinolinate synthetase A A388_03182 IPR023513 Quinolinate synthase A, type 1 A388_03182 IPR036094 A388_03182 A388_03183 IPR002813 Arginine biosynthesis protein ArgJ A388_03183 IPR016117 ArgJ-like domain A388_03184 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain A388_03184 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding A388_03184 IPR023546 Methylated-DNA--protein-cysteine methyltransferase A388_03184 IPR036217 A388_03184 A388_03184 IPR036388 A388_03184 A388_03184 IPR036631 A388_03184 A388_03185 IPR000390 Small multidrug resistance protein family A388_03186 IPR002524 Cation efflux protein A388_03186 IPR027469 Cation efflux protein transmembrane domain A388_03186 IPR036163 A388_03186 A388_03187 IPR007939 Copper resistance B precursor A388_03187 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel A388_03188 IPR001117 Multicopper oxidase, type 1 A388_03188 IPR002355 Multicopper oxidase, copper-binding site A388_03188 IPR006376 Copper-resistance protein CopA A388_03188 IPR008972 Cupredoxin A388_03188 IPR011706 Multicopper oxidase, type 2 A388_03188 IPR011707 Multicopper oxidase, type 3 A388_03188 IPR033138 A388_03188 A388_03190 IPR000150 Cof protein A388_03190 IPR006379 HAD-superfamily hydrolase, subfamily IIB A388_03190 IPR023214 HAD-like domain A388_03190 IPR036412 A388_03190 A388_03191 IPR000056 Ribulose-phosphate 3-epimerase-like A388_03191 IPR011060 Ribulose-phosphate binding barrel A388_03191 IPR013785 Aldolase-type TIM barrel A388_03191 IPR026019 Ribulose-phosphate 3-epimerase A388_03192 IPR014543 Uncharacterised conserved protein UCP028291 A388_03193 IPR000801 Putative esterase A388_03193 IPR014186 S-formylglutathione hydrolase A388_03193 IPR029058 Alpha/Beta hydrolase fold A388_03194 IPR001096 Peptidase C13, legumain A388_03194 IPR029030 Caspase-like domain A388_03195 IPR007536 Ribosomal RNA small subunit methyltransferase J A388_03195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_03196 IPR000905 Gcp-like domain A388_03196 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ A388_03197 IPR001451 Bacterial transferase hexapeptide repeat A388_03197 IPR011004 Trimeric LpxA-like A388_03198 IPR000086 NUDIX hydrolase domain A388_03198 IPR015797 NUDIX hydrolase domain-like A388_03199 IPR000086 NUDIX hydrolase domain A388_03199 IPR015797 NUDIX hydrolase domain-like A388_03199 IPR029401 Nudix hydrolase, N-terminal A388_03202 IPR005017 Membrane protein, aromatic hydrocarbon degradation A388_03204 IPR005074 Peptidase C39, bacteriocin processing A388_03206 IPR005801 ADC synthase A388_03206 IPR006805 Anthranilate synthase component I, N-terminal A388_03206 IPR015890 Chorismate binding, C-terminal A388_03206 IPR019999 Anthranilate synthase component I - like A388_03207 IPR004839 Aminotransferase, class I/classII A388_03207 IPR005861 Histidinol-phosphate aminotransferase family A388_03207 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_03207 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_03207 IPR015424 Pyridoxal phosphate-dependent transferase A388_03208 IPR001692 Histidinol dehydrogenase, conserved site A388_03208 IPR012131 Histidinol dehydrogenase A388_03208 IPR016161 Aldehyde/histidinol dehydrogenase A388_03208 IPR022695 Histidinol dehydrogenase, monofunctional A388_03209 IPR013820 ATP phosphoribosyltransferase, catalytic domain A388_03209 IPR018198 ATP phosphoribosyltransferase, conserved site A388_03209 IPR024893 ATP phosphoribosyltransferase HisG, short form A388_03210 IPR001986 Enolpyruvate transferase domain A388_03210 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase A388_03210 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta A388_03210 IPR036968 A388_03210 A388_03211 IPR002634 BolA protein A388_03211 IPR036065 A388_03211 A388_03212 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein A388_03212 IPR036567 A388_03212 A388_03213 IPR000394 RNA polymerase sigma factor 54 A388_03213 IPR007046 RNA polymerase sigma factor 54, core-binding A388_03213 IPR007634 RNA polymerase sigma factor 54, DNA-binding A388_03213 IPR038709 A388_03213 A388_03216 IPR007428 VacJ-like lipoprotein A388_03217 IPR001932 Protein phosphatase 2C (PP2C)-like domain A388_03217 IPR036457 A388_03217 A388_03218 IPR002645 STAS domain A388_03218 IPR036513 A388_03218 A388_03219 IPR001110 Uncharacterised protein family UPF0012, conserved site A388_03219 IPR003010 Carbon-nitrogen hydrolase A388_03219 IPR036526 A388_03219 A388_03220 IPR032538 A388_03220 A388_03221 IPR000835 MarR-type HTH domain A388_03221 IPR036388 A388_03221 A388_03221 IPR036390 A388_03221 A388_03222 IPR003718 OsmC/Ohr family A388_03222 IPR015946 K homology domain-like, alpha/beta A388_03222 IPR019953 Organic hydroperoxide resistance protein famiy A388_03222 IPR036102 A388_03222 A388_03223 IPR001482 Type II secretion system protein E A388_03223 IPR003593 AAA+ ATPase domain A388_03223 IPR013369 Type II secretion system GspE A388_03223 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03223 IPR037257 A388_03223 A388_03225 IPR006685 Mechanosensitive ion channel MscS A388_03225 IPR010920 Like-Sm (LSM) domain A388_03225 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 A388_03225 IPR011066 Mechanosensitive ion channel MscS, C-terminal A388_03225 IPR023408 A388_03225 A388_03226 IPR019286 Protein of unknown function DUF2339, transmembrane A388_03227 IPR001098 DNA-directed DNA polymerase, family A, palm domain A388_03227 IPR002298 DNA polymerase A A388_03227 IPR002421 5'-3' exonuclease, N-terminal A388_03227 IPR002562 3'-5' exonuclease domain A388_03227 IPR008918 Helix-hairpin-helix motif, class 2 A388_03227 IPR012337 Ribonuclease H-like domain A388_03227 IPR018320 DNA polymerase 1 A388_03227 IPR019760 DNA-directed DNA polymerase, family A, conserved site A388_03227 IPR020045 5'-3' exonuclease, C-terminal domain A388_03227 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal A388_03227 IPR029060 PIN domain-like A388_03227 IPR036279 A388_03227 A388_03227 IPR036397 A388_03227 A388_03228 IPR003425 Uncharacterised protein family Ycf19 A388_03229 IPR000304 Pyrroline-5-carboxylate reductase A388_03229 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_03229 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal A388_03229 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain A388_03229 IPR036291 A388_03229 A388_03230 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase A388_03230 IPR012094 Lysidine-tRNA(Ile) synthetase A388_03230 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal A388_03230 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal A388_03230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_03230 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain A388_03231 IPR001095 Acetyl-CoA carboxylase, alpha subunit A388_03231 IPR029045 ClpP/crotonase-like domain A388_03232 IPR003695 Ppx/GppA phosphatase A388_03232 IPR006674 HD domain A388_03232 IPR022371 Exopolyphosphatase A388_03232 IPR030673 A388_03232 A388_03233 IPR005746 Thioredoxin A388_03233 IPR013766 Thioredoxin domain A388_03233 IPR017937 Thioredoxin, conserved site A388_03233 IPR036249 A388_03233 A388_03234 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain A388_03234 IPR003593 AAA+ ATPase domain A388_03234 IPR004665 Transcription termination factor Rho A388_03234 IPR011112 Rho termination factor, N-terminal A388_03234 IPR011113 Rho termination factor, RNA-binding A388_03234 IPR011129 Cold shock protein A388_03234 IPR012340 Nucleic acid-binding, OB-fold A388_03234 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03234 IPR036269 A388_03234 A388_03236 IPR000119 Histone-like bacterial DNA-binding protein A388_03236 IPR005684 Integration host factor, alpha subunit A388_03236 IPR010992 Integration host factor (IHF)-like DNA-binding domain A388_03236 IPR020816 Histone-like DNA-binding protein, conserved site A388_03237 IPR002547 tRNA-binding domain A388_03237 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit A388_03237 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding A388_03237 IPR005146 B3/B4 tRNA-binding domain A388_03237 IPR005147 tRNA synthetase, B5-domain A388_03237 IPR009061 DNA binding domain, putative A388_03237 IPR012340 Nucleic acid-binding, OB-fold A388_03237 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 A388_03237 IPR036690 A388_03237 A388_03238 IPR002319 Phenylalanyl-tRNA synthetase A388_03238 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal A388_03238 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit A388_03238 IPR010978 tRNA-binding arm A388_03238 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial A388_03241 IPR005813 Ribosomal protein L20 A388_03241 IPR035566 A388_03241 A388_03242 IPR001706 Ribosomal protein L35, non-mitochondrial A388_03242 IPR018265 Ribosomal protein L35, conserved site A388_03242 IPR021137 Ribosomal protein L35 A388_03242 IPR037229 A388_03242 A388_03243 IPR010290 Transmembrane secretion effector A388_03243 IPR036259 A388_03243 A388_03244 IPR020143 Uncharacterised protein family, RP436 A388_03244 IPR032816 A388_03244 A388_03245 IPR004045 Glutathione S-transferase, N-terminal A388_03245 IPR004046 Glutathione S-transferase, C-terminal A388_03245 IPR036249 A388_03245 A388_03245 IPR036282 A388_03245 A388_03246 IPR001288 Translation initiation factor 3 A388_03246 IPR019815 Translation initiation factor 3, C-terminal A388_03246 IPR036788 A388_03246 A388_03247 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain A388_03247 IPR002320 Threonine-tRNA ligase, class IIa A388_03247 IPR004095 TGS A388_03247 IPR004154 Anticodon-binding A388_03247 IPR012675 Beta-grasp domain A388_03247 IPR012676 TGS-like A388_03247 IPR012947 Threonyl/alanyl tRNA synthetase, SAD A388_03247 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain A388_03247 IPR036621 A388_03247 A388_03248 IPR000873 AMP-dependent synthetase/ligase A388_03248 IPR020845 AMP-binding, conserved site A388_03248 IPR025110 AMP-binding enzyme C-terminal domain A388_03249 IPR006839 Ribosome-associated, YjgA A388_03249 IPR023153 PSPTO4464-like domain A388_03250 IPR000032 Phosphocarrier HPr protein-like A388_03250 IPR035895 A388_03250 A388_03251 IPR005337 ATPase, P-loop-containing A388_03251 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03252 IPR003721 Pantoate-beta-alanine ligase A388_03252 IPR004821 Cytidyltransferase-like domain A388_03252 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_03253 IPR003700 Ketopantoate hydroxymethyltransferase A388_03253 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain A388_03254 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK A388_03254 IPR035907 A388_03254 A388_03255 IPR002646 Poly A polymerase, head domain A388_03255 IPR010206 Poly(A) polymerase I A388_03255 IPR025866 Polymerase A arginine-rich C-terminal domain A388_03255 IPR032828 A388_03255 A388_03256 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 A388_03256 IPR004509 Competence protein ComEA, helix-hairpin-helix domain A388_03256 IPR010994 RuvA domain 2-like A388_03257 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core A388_03257 IPR011551 NTP pyrophosphohydrolase MazG, bacterial A388_03258 IPR002347 Glucose/ribitol dehydrogenase A388_03258 IPR036291 A388_03258 A388_03259 IPR002912 ACT domain A388_03259 IPR003607 HD/PDEase domain A388_03259 IPR004095 TGS A388_03259 IPR004811 RelA/SpoT family A388_03259 IPR007685 RelA/SpoT A388_03259 IPR012675 Beta-grasp domain A388_03259 IPR012676 TGS-like A388_03260 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD A388_03260 IPR010280 (Uracil-5)-methyltransferase family A388_03260 IPR012340 Nucleic acid-binding, OB-fold A388_03260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_03260 IPR030390 A388_03260 A388_03261 IPR012337 Ribonuclease H-like domain A388_03261 IPR019288 Predicted 3'-5' exonuclease, PolB-like A388_03261 IPR036397 A388_03261 A388_03262 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site A388_03262 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme A388_03262 IPR005856 Cysteine synthase K/M A388_03262 IPR005858 Cysteine synthase B A388_03262 IPR036052 A388_03262 A388_03263 IPR001789 Signal transduction response regulator, receiver domain A388_03263 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_03263 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain A388_03263 IPR004358 Signal transduction histidine kinase-related protein, C-terminal A388_03263 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain A388_03263 IPR011006 CheY-like superfamily A388_03263 IPR036097 A388_03263 A388_03263 IPR036641 A388_03263 A388_03263 IPR036890 A388_03263 A388_03264 IPR001753 Crotonase superfamily A388_03264 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site A388_03264 IPR029045 ClpP/crotonase-like domain A388_03265 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding A388_03265 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_03265 IPR013328 Dehydrogenase, multihelical A388_03265 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type A388_03265 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain A388_03265 IPR036291 A388_03265 A388_03266 IPR013022 Xylose isomerase-like, TIM barrel domain A388_03266 IPR026040 Hydroxypyruvate isomerase-like A388_03266 IPR036237 A388_03266 A388_03267 IPR004394 Protein Iojap/ribosomal silencing factor RsfS A388_03268 IPR002347 Glucose/ribitol dehydrogenase A388_03268 IPR036291 A388_03268 A388_03269 IPR012136 NADP transhydrogenase, beta subunit A388_03269 IPR029035 DHS-like NAD/FAD-binding domain A388_03269 IPR034300 A388_03269 A388_03270 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal A388_03271 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain A388_03271 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal A388_03271 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 A388_03271 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 A388_03271 IPR036291 A388_03271 A388_03272 IPR000620 Drug/metabolite transporter A388_03273 IPR006175 YjgF/Yer057p/UK114 family A388_03273 IPR035959 A388_03273 A388_03274 IPR011701 Major facilitator superfamily A388_03274 IPR036259 A388_03274 A388_03276 IPR001387 Cro/C1-type helix-turn-helix domain A388_03276 IPR010359 Protein of unknown function DUF955 A388_03276 IPR010982 Lambda repressor-like, DNA-binding domain A388_03276 IPR017970 Homeobox, conserved site A388_03277 IPR007939 Copper resistance B precursor A388_03277 IPR036709 A388_03277 A388_03278 IPR001117 Multicopper oxidase, type 1 A388_03278 IPR002355 Multicopper oxidase, copper-binding site A388_03278 IPR006376 Copper-resistance protein CopA A388_03278 IPR008972 Cupredoxin A388_03278 IPR011706 Multicopper oxidase, type 2 A388_03278 IPR011707 Multicopper oxidase, type 3 A388_03278 IPR033138 A388_03278 A388_03280 IPR001789 Signal transduction response regulator, receiver domain A388_03280 IPR001867 Signal transduction response regulator, C-terminal A388_03280 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response A388_03280 IPR011006 CheY-like superfamily A388_03280 IPR016032 Signal transduction response regulator, C-terminal effector A388_03280 IPR036388 A388_03280 A388_03281 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_03281 IPR003660 HAMP linker domain A388_03281 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain A388_03281 IPR004358 Signal transduction histidine kinase-related protein, C-terminal A388_03281 IPR006290 Heavy metal sensor kinase A388_03281 IPR036097 A388_03281 A388_03281 IPR036890 A388_03281 A388_03282 IPR001757 Cation-transporting P-type ATPase A388_03282 IPR007029 YHS domain A388_03282 IPR008250 P-type ATPase, A domain A388_03282 IPR011017 TRASH domain A388_03282 IPR012348 Ribonucleotide reductase-related A388_03282 IPR018303 P-type ATPase, phosphorylation site A388_03282 IPR023214 HAD-like domain A388_03282 IPR023298 P-type ATPase, transmembrane domain A388_03282 IPR023299 P-type ATPase, cytoplasmic domain N A388_03282 IPR027256 Cation-transporting P-type ATPase, subfamily IB A388_03282 IPR036412 A388_03282 A388_03283 IPR007348 CopC domain A388_03283 IPR014756 Immunoglobulin E-set A388_03284 IPR008457 Copper resistance D A388_03285 IPR017686 Phage/plasmid-like protein A388_03285 IPR026325 Protein of unknown function DUF932 A388_03290 IPR036869 A388_03290 A388_03296 IPR020518 Transcription regulator PrtN A388_03297 IPR002104 Integrase, catalytic A388_03297 IPR011010 DNA breaking-rejoining enzyme, catalytic core A388_03297 IPR013762 Integrase-like, catalytic core A388_03298 IPR001269 tRNA-dihydrouridine synthase A388_03298 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN A388_03298 IPR013785 Aldolase-type TIM barrel A388_03298 IPR018517 tRNA-dihydrouridine synthase, conserved site A388_03300 IPR000847 Transcription regulator HTH, LysR A388_03300 IPR005119 LysR, substrate-binding A388_03300 IPR036388 A388_03300 A388_03300 IPR036390 A388_03300 A388_03301 IPR000594 UBA/THIF-type NAD/FAD binding fold A388_03301 IPR035985 A388_03301 A388_03302 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel A388_03302 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha A388_03302 IPR006249 Aconitate/iron regulatory protein 2 A388_03302 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel A388_03302 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 A388_03302 IPR018136 Aconitase family, 4Fe-4S cluster binding site A388_03302 IPR036008 A388_03302 A388_03303 IPR001130 TatD family A388_03303 IPR018228 Deoxyribonuclease, TatD-related, conserved site A388_03303 IPR032466 A388_03303 A388_03304 IPR021729 Domain of unknown function DUF3298 A388_03304 IPR037126 A388_03304 A388_03306 IPR000795 Elongation factor, GTP-binding domain A388_03306 IPR004548 Peptide chain release factor 3 A388_03306 IPR005225 Small GTP-binding protein domain A388_03306 IPR009000 Translation protein, beta-barrel domain A388_03306 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03306 IPR031157 A388_03306 A388_03306 IPR032090 A388_03306 A388_03306 IPR035647 A388_03306 A388_03306 IPR038467 A388_03306 A388_03307 IPR016084 Haem oxygenase-like, multi-helical A388_03308 IPR001647 DNA-binding HTH domain, TetR-type A388_03308 IPR009057 Homeodomain-like A388_03308 IPR036271 A388_03308 A388_03309 IPR001647 DNA-binding HTH domain, TetR-type A388_03309 IPR009057 Homeodomain-like A388_03310 IPR000160 GGDEF domain A388_03310 IPR001633 EAL domain A388_03310 IPR029787 Nucleotide cyclase A388_03310 IPR035919 A388_03310 A388_03311 IPR000506 Acetohydroxy acid isomeroreductase C-terminal A388_03311 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_03311 IPR013023 Acetohydroxy acid isomeroreductase A388_03311 IPR013116 Acetohydroxy acid isomeroreductase, catalytic A388_03311 IPR014359 Ketol-acid reductoisomerase, gammaproteobacteria A388_03311 IPR036291 A388_03311 A388_03312 IPR004789 Acetolactate synthase, small subunit A388_03312 IPR019455 Acetolactate synthase, small subunit, C-terminal A388_03312 IPR027271 A388_03312 A388_03313 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding A388_03313 IPR012000 Thiamine pyrophosphate enzyme, central domain A388_03313 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain A388_03313 IPR012846 Acetolactate synthase, large subunit, biosynthetic A388_03313 IPR029035 DHS-like NAD/FAD-binding domain A388_03313 IPR029061 Thiamin diphosphate-binding fold A388_03314 IPR025392 Domain of unknown function DUF4124 A388_03315 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site A388_03315 IPR002300 Aminoacyl-tRNA synthetase, class Ia A388_03315 IPR002302 Leucine-tRNA ligase A388_03315 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain A388_03315 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding A388_03315 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding A388_03315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_03315 IPR015413 Methionyl/Leucyl tRNA synthetase A388_03315 IPR025709 Leucyl-tRNA synthetase, editing domain A388_03316 IPR007485 Lipopolysaccharide assembly, LptE A388_03317 IPR005790 DNA polymerase III, delta subunit A388_03317 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal A388_03317 IPR010372 DNA polymerase III, delta A388_03317 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03318 IPR006143 RND efflux pump, membrane fusion protein A388_03318 IPR032317 A388_03318 A388_03319 IPR003439 ABC transporter-like A388_03319 IPR003593 AAA+ ATPase domain A388_03319 IPR003838 Permease FtsX-like A388_03319 IPR017871 ABC transporter, conserved site A388_03319 IPR025857 MacB-like periplasmic core domain A388_03319 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03320 IPR003423 Outer membrane efflux protein A388_03320 IPR010131 RND efflux system, outer membrane lipoprotein, NodT A388_03321 IPR002347 Glucose/ribitol dehydrogenase A388_03321 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) A388_03321 IPR036291 A388_03321 A388_03322 IPR010539 Bax inhibitor-1 A388_03323 IPR012337 Ribonuclease H-like domain A388_03323 IPR013520 Exonuclease, RNase T/DNA polymerase III A388_03323 IPR022894 Oligoribonuclease A388_03323 IPR036397 A388_03323 A388_03324 IPR004881 Ribosome biogenesis GTPase RsgA, putative A388_03324 IPR010914 EngC GTPase A388_03324 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03325 IPR001763 Rhodanese-like domain A388_03325 IPR036873 A388_03325 A388_03326 IPR002109 Glutaredoxin A388_03326 IPR011767 Glutaredoxin active site A388_03326 IPR011900 Glutaredoxin, GrxC A388_03326 IPR014025 Glutaredoxin subgroup A388_03326 IPR036249 A388_03326 A388_03327 IPR003708 Bacterial protein export chaperone SecB A388_03327 IPR035958 A388_03327 A388_03328 IPR008278 4'-phosphopantetheinyl transferase superfamily A388_03328 IPR037143 A388_03328 A388_03329 IPR005225 Small GTP-binding protein domain A388_03329 IPR006073 GTP binding domain A388_03329 IPR015946 K homology domain-like, alpha/beta A388_03329 IPR016484 GTP-binding protein EngA A388_03329 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03329 IPR032859 A388_03329 A388_03330 IPR002372 Pyrrolo-quinoline quinone repeat A388_03330 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily A388_03330 IPR015943 WD40/YVTN repeat-like-containing domain A388_03330 IPR017687 Outer membrane protein assembly factor BamB A388_03330 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat A388_03331 IPR011990 Tetratricopeptide-like helical domain A388_03331 IPR018704 Domain of unknown function DUF09976 A388_03331 IPR026039 Uncharacterised protein family UPF0070 A388_03332 IPR004154 Anticodon-binding A388_03332 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit A388_03332 IPR015807 Histidine-tRNA ligase A388_03332 IPR036621 A388_03332 A388_03333 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type A388_03333 IPR011005 Dihydropteroate synthase-like A388_03333 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial A388_03334 IPR025194 Domain of unknown function DUF4115 A388_03335 IPR011990 Tetratricopeptide-like helical domain A388_03335 IPR013360 Pilus biogenesis/stability type IV, PilW A388_03335 IPR019734 Tetratricopeptide repeat A388_03336 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr A388_03336 IPR007197 Radical SAM A388_03336 IPR013785 Aldolase-type TIM barrel A388_03336 IPR027492 Dual-specificity RNA methyltransferase RlmN A388_03337 IPR001564 Nucleoside diphosphate kinase A388_03337 IPR023005 Nucleoside diphosphate kinase, active site A388_03337 IPR034907 A388_03337 A388_03337 IPR036850 A388_03337 A388_03338 IPR007479 ISC system FeS cluster assembly, IscX A388_03338 IPR036762 A388_03338 A388_03339 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase A388_03339 IPR036938 A388_03339 A388_03340 IPR001296 Glycosyl transferase, family 1 A388_03340 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain A388_03341 IPR001478 PDZ domain A388_03341 IPR004447 C-terminal-processing peptidase S41A A388_03341 IPR005151 Tail specific protease A388_03341 IPR020992 Tail specific protease, C-terminal A388_03341 IPR029045 ClpP/crotonase-like domain A388_03341 IPR036034 A388_03341 A388_03342 IPR001764 Glycoside hydrolase, family 3, N-terminal A388_03342 IPR017853 Glycoside hydrolase, superfamily A388_03342 IPR019800 Glycoside hydrolase, family 3, active site A388_03342 IPR022956 Beta-hexosaminidase, bacterial A388_03342 IPR036962 A388_03342 A388_03343 IPR007213 Leucine carboxyl methyltransferase A388_03343 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_03344 IPR000073 Alpha/beta hydrolase fold-1 A388_03344 IPR029058 Alpha/Beta hydrolase fold A388_03345 IPR000965 Gamma-glutamyl phosphate reductase GPR A388_03345 IPR012134 Glutamate-5-semialdehyde dehydrogenase A388_03345 IPR015590 Aldehyde dehydrogenase domain A388_03345 IPR016161 Aldehyde/histidinol dehydrogenase A388_03345 IPR016162 Aldehyde dehydrogenase, N-terminal A388_03345 IPR016163 Aldehyde dehydrogenase, C-terminal A388_03345 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site A388_03346 IPR015590 Aldehyde dehydrogenase domain A388_03346 IPR016160 Aldehyde dehydrogenase, cysteine active site A388_03346 IPR016161 Aldehyde/histidinol dehydrogenase A388_03346 IPR016162 Aldehyde dehydrogenase, N-terminal A388_03346 IPR016163 Aldehyde dehydrogenase, C-terminal A388_03347 IPR006001 Carbohydrate kinase, thermoresistant glucokinase A388_03347 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03347 IPR031322 A388_03347 A388_03348 IPR003474 Gluconate transporter A388_03349 IPR000887 KDPG/KHG aldolase A388_03349 IPR013785 Aldolase-type TIM barrel A388_03349 IPR031337 A388_03349 A388_03349 IPR031338 A388_03349 A388_03350 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase A388_03350 IPR004786 6-phosphogluconate dehydratase A388_03350 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site A388_03350 IPR037237 A388_03350 A388_03351 IPR000890 Aliphatic acid kinase, short-chain A388_03351 IPR004372 Acetate/Proprionate kinase A388_03351 IPR023865 Aliphatic acid kinase, short-chain, conserved site A388_03352 IPR002505 Phosphate acetyl/butaryl transferase A388_03352 IPR004614 Phosphate acetyltransferase A388_03352 IPR010766 DRTGG A388_03352 IPR016475 Phosphate acetyltransferase, bacteria A388_03352 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03352 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like A388_03353 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain A388_03353 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain A388_03353 IPR011167 Iron-dependent fumarate hydratase A388_03353 IPR036660 A388_03353 A388_03354 IPR018637 Domain of unknown function DUF2059 A388_03355 IPR022548 Domain of unknown function DUF2846 A388_03356 IPR003593 AAA+ ATPase domain A388_03356 IPR003959 ATPase, AAA-type, core A388_03356 IPR004487 Clp protease, ATP-binding subunit ClpX A388_03356 IPR010603 Zinc finger, ClpX C4-type A388_03356 IPR019489 Clp ATPase, C-terminal A388_03356 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03356 IPR038366 A388_03356 A388_03357 IPR001907 ATP-dependent Clp protease proteolytic subunit A388_03357 IPR018215 ClpP, active site A388_03357 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA A388_03357 IPR029045 ClpP/crotonase-like domain A388_03357 IPR033135 A388_03357 A388_03358 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain A388_03358 IPR005215 Trigger factor A388_03358 IPR008880 Trigger factor, C-terminal domain A388_03358 IPR008881 Trigger factor, ribosome-binding, bacterial A388_03358 IPR027304 Trigger factor/SurA domain A388_03358 IPR036611 A388_03358 A388_03358 IPR037041 A388_03358 A388_03359 IPR000531 TonB-dependent receptor, beta-barrel A388_03359 IPR010105 TonB-dependent siderophore receptor A388_03359 IPR012910 TonB-dependent receptor, plug A388_03359 IPR036942 A388_03359 A388_03359 IPR037066 A388_03359 A388_03360 IPR005123 Oxoglutarate/iron-dependent dioxygenase A388_03360 IPR006620 Prolyl 4-hydroxylase, alpha subunit A388_03360 IPR023550 PKHD-type hydroxylase A388_03361 IPR000891 Pyruvate carboxyltransferase A388_03361 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site A388_03361 IPR005668 2-isopropylmalate synthase A388_03361 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain A388_03361 IPR013785 Aldolase-type TIM barrel A388_03361 IPR036230 A388_03361 A388_03362 IPR000073 Alpha/beta hydrolase fold-1 A388_03362 IPR008220 Homoserine acetyltransferase A388_03362 IPR029058 Alpha/Beta hydrolase fold A388_03363 IPR010743 Methionine biosynthesis MetW A388_03363 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_03364 IPR006597 Sel1-like A388_03364 IPR011990 Tetratricopeptide-like helical domain A388_03365 IPR002637 Ham1-like protein A388_03365 IPR020922 Non-canonical purine NTP pyrophosphatase A388_03365 IPR029001 Inosine triphosphate pyrophosphatase-like A388_03367 IPR003369 Sec-independent protein translocase protein TatA/B/E A388_03367 IPR006312 Sec-independent protein translocase protein TatA/E A388_03368 IPR003369 Sec-independent protein translocase protein TatA/B/E A388_03368 IPR018448 Twin-arginine translocation protein TatB A388_03369 IPR002033 Sec-independent periplasmic protein translocase TatC A388_03370 IPR008557 Protein of unknown function DUF839 A388_03371 IPR008557 Protein of unknown function DUF839 A388_03372 IPR008551 Protein of unknown function DUF833 A388_03373 IPR001640 Prolipoprotein diacylglyceryl transferase A388_03376 IPR000398 Thymidylate synthase A388_03376 IPR020940 Thymidylate synthase, active site A388_03376 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain A388_03376 IPR036926 A388_03376 A388_03377 IPR001796 Dihydrofolate reductase domain A388_03377 IPR012259 Dihydrofolate reductase A388_03377 IPR017925 Dihydrofolate reductase conserved site A388_03377 IPR024072 Dihydrofolate reductase-like domain A388_03378 IPR025178 Domain of unknown function DUF4105 A388_03379 IPR002569 Peptide methionine sulphoxide reductase MsrA A388_03379 IPR036509 A388_03379 A388_03380 IPR003400 Biopolymer transport protein ExbD/TolR A388_03381 IPR002898 MotA/TolQ/ExbB proton channel A388_03382 IPR006260 TonB, C-terminal A388_03382 IPR037682 A388_03382 A388_03383 IPR002376 Formyl transferase, N-terminal A388_03383 IPR002912 ACT domain A388_03383 IPR004810 Formyltetrahydrofolate deformylase A388_03383 IPR036477 A388_03383 A388_03384 IPR001647 DNA-binding HTH domain, TetR-type A388_03384 IPR009057 Homeodomain-like A388_03384 IPR025722 Bacterial transcriptional repressor TetR A388_03385 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent A388_03385 IPR015590 Aldehyde dehydrogenase domain A388_03385 IPR016160 Aldehyde dehydrogenase, cysteine active site A388_03385 IPR016161 Aldehyde/histidinol dehydrogenase A388_03385 IPR016162 Aldehyde dehydrogenase, N-terminal A388_03385 IPR016163 Aldehyde dehydrogenase, C-terminal A388_03385 IPR029510 Aldehyde dehydrogenase, glutamic acid active site A388_03386 IPR001383 Ribosomal protein L28 A388_03386 IPR026569 Ribosomal protein L28/L24 A388_03386 IPR034704 A388_03386 A388_03386 IPR037147 A388_03386 A388_03387 IPR001705 Ribosomal protein L33 A388_03387 IPR011332 Zinc-binding ribosomal protein A388_03387 IPR018264 Ribosomal protein L33, conserved site A388_03387 IPR038584 A388_03387 A388_03388 IPR003148 Regulator of K+ conductance, N-terminal A388_03388 IPR006153 Cation/H+ exchanger A388_03388 IPR036291 A388_03388 A388_03388 IPR038770 A388_03388 A388_03391 IPR007374 ASCH domain A388_03391 IPR015947 PUA-like domain A388_03392 IPR000504 RNA recognition motif domain A388_03392 IPR012677 Nucleotide-binding, alpha-beta plait A388_03392 IPR035979 A388_03392 A388_03393 IPR013986 DExx box DNA helicase domain A388_03393 IPR014017 DNA helicase, UvrD-like, C-terminal A388_03393 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03393 IPR034739 A388_03393 A388_03394 IPR005325 Protein of unknown function DUF308, membrane A388_03396 IPR003601 DNA topoisomerase, type IA, domain 2 A388_03396 IPR003602 DNA topoisomerase, type IA, DNA-binding domain A388_03396 IPR005733 DNA topoisomerase I, bacterial-type A388_03396 IPR006171 Toprim domain A388_03396 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type A388_03396 IPR013497 DNA topoisomerase, type IA, central A388_03396 IPR013498 DNA topoisomerase, type IA, zn finger A388_03396 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 A388_03396 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 A388_03396 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 A388_03396 IPR023405 DNA topoisomerase, type IA, core domain A388_03396 IPR023406 DNA topoisomerase, type IA, active site A388_03396 IPR028612 DNA topoisomerase I, type IA A388_03398 IPR002577 Helix-turn-helix, HxlR type A388_03398 IPR036388 A388_03398 A388_03398 IPR036390 A388_03398 A388_03399 IPR011032 GroES (chaperonin 10)-like A388_03399 IPR013154 Alcohol dehydrogenase GroES-like A388_03399 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 A388_03399 IPR020843 Polyketide synthase, enoylreductase A388_03399 IPR036291 A388_03399 A388_03400 IPR007236 SlyX A388_03401 IPR003439 ABC transporter-like A388_03401 IPR003593 AAA+ ATPase domain A388_03401 IPR017871 ABC transporter, conserved site A388_03401 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03401 IPR032524 A388_03401 A388_03401 IPR032781 A388_03401 A388_03401 IPR037118 A388_03401 A388_03402 IPR001123 Lysine-type exporter protein (LYSE/YGGA) A388_03403 IPR004960 Bacterial lipid A biosynthesis acyltransferase A388_03403 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase A388_03404 IPR001296 Glycosyl transferase, family 1 A388_03404 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain A388_03405 IPR001991 Sodium:dicarboxylate symporter A388_03405 IPR018107 Sodium:dicarboxylate symporter, conserved site A388_03405 IPR034703 A388_03405 A388_03405 IPR036458 A388_03405 A388_03406 IPR005135 Endonuclease/exonuclease/phosphatase A388_03406 IPR036691 A388_03406 A388_03407 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site A388_03407 IPR000534 Semialdehyde dehydrogenase, NAD-binding A388_03407 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type A388_03407 IPR012080 Aspartate-semialdehyde dehydrogenase A388_03407 IPR012280 Semialdehyde dehydrogenase, dimerisation domain A388_03407 IPR036291 A388_03407 A388_03409 IPR038440 A388_03409 A388_03410 IPR006034 Asparaginase/glutaminase A388_03410 IPR027473 L-asparaginase, C-terminal domain A388_03410 IPR027474 L-asparaginase, N-terminal A388_03410 IPR036152 A388_03410 A388_03410 IPR037152 A388_03410 A388_03411 IPR001406 Pseudouridine synthase I, TruA A388_03411 IPR020095 Pseudouridine synthase I, TruA, C-terminal A388_03411 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain A388_03411 IPR020103 Pseudouridine synthase, catalytic domain A388_03412 IPR009057 Homeodomain-like A388_03412 IPR018060 DNA binding HTH domain, AraC-type A388_03412 IPR032687 A388_03412 A388_03413 IPR004368 Translation initiation factor IF-1 A388_03413 IPR006196 RNA-binding domain, S1, IF1 type A388_03413 IPR012340 Nucleic acid-binding, OB-fold A388_03413 IPR022967 RNA-binding domain, S1 A388_03414 IPR009739 Protein of unknown function DUF1311 A388_03416 IPR004429 Isopropylmalate dehydrogenase A388_03416 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site A388_03416 IPR024084 Isopropylmalate dehydrogenase-like domain A388_03418 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel A388_03418 IPR004431 3-isopropylmalate dehydratase, small subunit A388_03418 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel A388_03419 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha A388_03419 IPR004430 3-isopropylmalate dehydratase, large subunit A388_03419 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 A388_03419 IPR018136 Aconitase family, 4Fe-4S cluster binding site A388_03419 IPR036008 A388_03419 A388_03420 IPR018638 Domain of unknown function DUF2061, membrane A388_03421 IPR000847 Transcription regulator HTH, LysR A388_03421 IPR005119 LysR, substrate-binding A388_03421 IPR036388 A388_03421 A388_03421 IPR036390 A388_03421 A388_03422 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial A388_03422 IPR023214 HAD-like domain A388_03422 IPR036412 A388_03422 A388_03423 IPR000086 NUDIX hydrolase domain A388_03423 IPR015797 NUDIX hydrolase domain-like A388_03423 IPR020084 NUDIX hydrolase, conserved site A388_03423 IPR020476 NUDIX hydrolase A388_03423 IPR022927 RNA pyrophosphohydrolase RppH A388_03424 IPR000121 PEP-utilising enzyme, C-terminal A388_03424 IPR003018 GAF domain A388_03424 IPR006318 Phosphoenolpyruvate-utilising enzyme A388_03424 IPR008279 PEP-utilising enzyme, mobile domain A388_03424 IPR008731 Phosphotransferase system, enzyme I N-terminal A388_03424 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain A388_03424 IPR023151 PEP-utilising enzyme, conserved site A388_03424 IPR029016 GAF domain-like A388_03424 IPR036618 A388_03424 A388_03424 IPR036637 A388_03424 A388_03425 IPR000763 Catalase-peroxidase haem A388_03425 IPR002016 Haem peroxidase, plant/fungal/bacterial A388_03425 IPR010255 Haem peroxidase A388_03425 IPR019794 Peroxidase, active site A388_03426 IPR001279 Beta-lactamase-like A388_03426 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D A388_03426 IPR036866 A388_03426 A388_03427 IPR000847 Transcription regulator HTH, LysR A388_03427 IPR005119 LysR, substrate-binding A388_03427 IPR036388 A388_03427 A388_03427 IPR036390 A388_03427 A388_03428 IPR009781 Protein of unknown function DUF1345 A388_03429 IPR004045 Glutathione S-transferase, N-terminal A388_03429 IPR004046 Glutathione S-transferase, C-terminal A388_03429 IPR036249 A388_03429 A388_03429 IPR036282 A388_03429 A388_03430 IPR013196 Helix-turn-helix, type 11 A388_03430 IPR026881 WYL domain A388_03430 IPR036388 A388_03430 A388_03430 IPR036390 A388_03430 A388_03431 IPR006439 HAD hydrolase, subfamily IA A388_03431 IPR023198 Phosphoglycolate phosphatase, domain 2 A388_03431 IPR023214 HAD-like domain A388_03431 IPR036412 A388_03431 A388_03432 IPR002942 RNA-binding S4 domain A388_03432 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F A388_03432 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site A388_03432 IPR006225 Pseudouridine synthase, RluC/RluD A388_03432 IPR020103 Pseudouridine synthase, catalytic domain A388_03432 IPR036986 A388_03432 A388_03433 IPR003029 Ribosomal protein S1, RNA-binding domain A388_03433 IPR004659 Ribonuclease E/G A388_03433 IPR012340 Nucleic acid-binding, OB-fold A388_03433 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G A388_03433 IPR022967 RNA-binding domain, S1 A388_03433 IPR028878 Ribonuclease E A388_03434 IPR000873 AMP-dependent synthetase/ligase A388_03434 IPR020845 AMP-binding, conserved site A388_03434 IPR025110 AMP-binding enzyme C-terminal domain A388_03437 IPR000847 Transcription regulator HTH, LysR A388_03437 IPR005119 LysR, substrate-binding A388_03437 IPR036388 A388_03437 A388_03437 IPR036390 A388_03437 A388_03438 IPR002347 Glucose/ribitol dehydrogenase A388_03438 IPR036291 A388_03438 A388_03439 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related A388_03439 IPR006638 Elongator protein 3/MiaB/NifB A388_03439 IPR007197 Radical SAM A388_03439 IPR010723 HemN, C-terminal domain A388_03439 IPR023404 Radical SAM, alpha/beta horseshoe A388_03440 IPR006750 Protein of unknown function DUF606 A388_03441 IPR002528 Multi antimicrobial extrusion protein A388_03442 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_03442 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain A388_03442 IPR036250 A388_03442 A388_03442 IPR037069 A388_03442 A388_03443 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain A388_03443 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain A388_03443 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain A388_03443 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal A388_03443 IPR023922 Sulphate-starvation-induced SfnB A388_03443 IPR036250 A388_03443 A388_03443 IPR037069 A388_03443 A388_03444 IPR004147 UbiB domain A388_03444 IPR011009 Protein kinase-like domain A388_03445 IPR002150 Ribosomal protein L31 A388_03445 IPR027493 Ribosomal protein L31 type B A388_03445 IPR034704 A388_03445 A388_03446 IPR014984 HopJ type III effector protein A388_03446 IPR038604 A388_03446 A388_03447 IPR003691 Putative fluoride ion transporter CrcB A388_03448 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V A388_03448 IPR011057 Mss4-like A388_03449 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like A388_03449 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 A388_03449 IPR023166 HI0933 insert-like domain A388_03449 IPR036188 A388_03449 A388_03450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_03451 IPR005584 DNA gyrase inhibitor YacG A388_03451 IPR013088 Zinc finger, NHR/GATA-type A388_03452 IPR001279 Beta-lactamase-like A388_03452 IPR036866 A388_03452 A388_03453 IPR001015 Ferrochelatase A388_03453 IPR019772 Ferrochelatase, active site A388_03454 IPR025139 Domain of unknown function DUF4062 A388_03455 IPR001920 Asp/Glu racemase A388_03455 IPR004391 Glutamate racemase A388_03455 IPR015942 Asp/Glu/hydantoin racemase A388_03455 IPR018187 Asp/Glu racemase, active site A388_03455 IPR033134 A388_03455 A388_03456 IPR010707 Protein of unknown function DUF1285 A388_03456 IPR023361 Protein of unknown function DUF1285, beta-roll domain A388_03457 IPR036188 A388_03457 A388_03459 IPR001455 TusA-like domain A388_03459 IPR036868 A388_03459 A388_03460 IPR000644 CBS domain A388_03460 IPR005170 Transporter-associated domain A388_03460 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 A388_03460 IPR036318 A388_03460 A388_03461 IPR003010 Carbon-nitrogen hydrolase A388_03461 IPR004563 Apolipoprotein N-acyltransferase A388_03461 IPR036526 A388_03461 A388_03462 IPR002547 tRNA-binding domain A388_03462 IPR008231 Export-related chaperone protein CsaA A388_03462 IPR012340 Nucleic acid-binding, OB-fold A388_03464 IPR000983 Bacterial general secretion pathway protein G-type pilin A388_03464 IPR010054 General secretion pathway protein G A388_03464 IPR012902 Prokaryotic N-terminal methylation site A388_03464 IPR013545 Type II secretion system protein G A388_03465 IPR001992 Type II secretion system conserved site A388_03465 IPR003004 GspF/PilC family A388_03465 IPR011850 General secretion pathway protein F A388_03465 IPR018076 Type II secretion system F domain A388_03466 IPR001650 Helicase, C-terminal A388_03466 IPR005259 Primosomal protein n A388_03466 IPR006935 Helicase/UvrB domain A388_03466 IPR014001 Helicase, superfamily 1/2, ATP-binding domain A388_03466 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03467 IPR003148 Regulator of K+ conductance, N-terminal A388_03467 IPR004771 K+/H+ exchanger A388_03467 IPR006153 Cation/H+ exchanger A388_03467 IPR036291 A388_03467 A388_03467 IPR038770 A388_03467 A388_03468 IPR000397 Heat shock protein Hsp33 A388_03468 IPR016153 Heat shock protein Hsp33, N-terminal A388_03468 IPR016154 Heat shock protein Hsp33, C-terminal A388_03468 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain A388_03469 IPR001123 Lysine-type exporter protein (LYSE/YGGA) A388_03470 IPR001623 DnaJ domain A388_03470 IPR002939 Chaperone DnaJ, C-terminal A388_03470 IPR008971 HSP40/DnaJ peptide-binding A388_03470 IPR036869 A388_03470 A388_03472 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB A388_03473 IPR001247 Exoribonuclease, phosphorolytic domain 1 A388_03473 IPR003029 Ribosomal protein S1, RNA-binding domain A388_03473 IPR004087 K Homology domain A388_03473 IPR004088 K Homology domain, type 1 A388_03473 IPR012162 Polyribonucleotide nucleotidyltransferase A388_03473 IPR012340 Nucleic acid-binding, OB-fold A388_03473 IPR015847 Exoribonuclease, phosphorolytic domain 2 A388_03473 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain A388_03473 IPR020568 Ribosomal protein S5 domain 2-type fold A388_03473 IPR022967 RNA-binding domain, S1 A388_03473 IPR027408 PNPase/RNase PH domain A388_03473 IPR036345 A388_03473 A388_03473 IPR036456 A388_03473 A388_03473 IPR036612 A388_03473 A388_03474 IPR000589 Ribosomal protein S15 A388_03474 IPR005290 Ribosomal protein S15, bacterial-type A388_03474 IPR009068 S15/NS1, RNA-binding A388_03475 IPR001466 Beta-lactamase-related A388_03475 IPR012338 Beta-lactamase/transpeptidase-like A388_03476 IPR003593 AAA+ ATPase domain A388_03476 IPR006344 Exodeoxyribonuclease V, alpha subunit A388_03476 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03476 IPR027785 UvrD-like helicase C-terminal domain A388_03477 IPR004586 Exodeoxyribonuclease V, beta subunit A388_03477 IPR011335 Restriction endonuclease type II-like A388_03477 IPR011604 Exonuclease, phage-type/RecB, C-terminal A388_03477 IPR014017 DNA helicase, UvrD-like, C-terminal A388_03477 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03477 IPR034739 A388_03477 A388_03477 IPR038726 A388_03477 A388_03478 IPR006697 Exodeoxyribonuclease V, gamma subunit A388_03478 IPR011335 Restriction endonuclease type II-like A388_03478 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03480 IPR022488 Polyphosphate kinase-2-related A388_03480 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03482 IPR004033 UbiE/COQ5 methyltransferase A388_03482 IPR023576 UbiE/COQ5 methyltransferase, conserved site A388_03482 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_03484 IPR004147 UbiB domain A388_03484 IPR011009 Protein kinase-like domain A388_03485 IPR002938 Monooxygenase, FAD-binding A388_03485 IPR036188 A388_03485 A388_03486 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain A388_03486 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase A388_03486 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like A388_03486 IPR023019 Histidine biosynthesis bifunctional protein HisIE A388_03486 IPR026660 Phosphoribosyl-AMP cyclohydrolase A388_03486 IPR038019 A388_03486 A388_03487 IPR014017 DNA helicase, UvrD-like, C-terminal A388_03487 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03488 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03488 IPR038729 A388_03488 A388_03489 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal A388_03489 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase A388_03489 IPR007182 Na+/H+ antiporter MnhB subunit-related protein A388_03489 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup A388_03489 IPR025383 Domain of unknown function DUF4040 A388_03490 IPR039428 A388_03490 A388_03491 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase A388_03491 IPR003918 NADH:ubiquinone oxidoreductase A388_03492 IPR002758 Na+/H+ antiporter subunit E A388_03493 IPR007208 Na(+)/H(+) antiporter subunit F-like A388_03494 IPR005133 Na+/H+ antiporter subunit G A388_03495 IPR000238 Ribosome-binding factor A A388_03495 IPR015946 K homology domain-like, alpha/beta A388_03495 IPR023799 Ribosome-binding factor A domain A388_03496 IPR000178 Translation initiation factor aIF-2, bacterial-like A388_03496 IPR000795 Elongation factor, GTP-binding domain A388_03496 IPR005225 Small GTP-binding protein domain A388_03496 IPR006847 Translation initiation factor IF-2, N-terminal A388_03496 IPR009000 Translation protein, beta-barrel domain A388_03496 IPR009061 DNA binding domain, putative A388_03496 IPR013575 Initiation factor 2 associated domain, bacterial A388_03496 IPR023115 Translation initiation factor IF- 2, domain 3 A388_03496 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03496 IPR036925 A388_03496 A388_03497 IPR009019 K homology domain, prokaryotic type A388_03497 IPR010213 Transcription termination factor NusA A388_03497 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical A388_03497 IPR012340 Nucleic acid-binding, OB-fold A388_03497 IPR013735 Transcription factor NusA, N-terminal A388_03497 IPR015946 K homology domain-like, alpha/beta A388_03497 IPR022967 RNA-binding domain, S1 A388_03497 IPR025249 KH domain, NusA-like A388_03497 IPR030842 A388_03497 A388_03497 IPR036555 A388_03497 A388_03498 IPR003728 Ribosome maturation factor RimP A388_03498 IPR028989 Ribosome maturation factor RimP, N-terminal A388_03498 IPR028998 Ribosome maturation factor RimP, C-terminal A388_03498 IPR035956 A388_03498 A388_03498 IPR036847 A388_03498 A388_03502 IPR004692 Preprotein translocase SecG subunit A388_03503 IPR000652 Triosephosphate isomerase A388_03503 IPR013785 Aldolase-type TIM barrel A388_03503 IPR020861 Triosephosphate isomerase, active site A388_03503 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic A388_03503 IPR035990 A388_03503 A388_03504 IPR001482 Type II secretion system protein E A388_03504 IPR007831 General secretory system II, protein E, N-terminal A388_03504 IPR013374 ATPase, type IV, pilus assembly, PilB A388_03504 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03504 IPR037257 A388_03504 A388_03505 IPR001992 Type II secretion system conserved site A388_03505 IPR003004 GspF/PilC family A388_03505 IPR018076 Type II secretion system F domain A388_03506 IPR000045 Prepilin type IV endopeptidase, peptidase domain A388_03506 IPR010627 Peptidase A24A, N-terminal A388_03506 IPR014032 Peptidase A24A, prepilin type IV, bacterial A388_03507 IPR001977 Dephospho-CoA kinase A388_03507 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03508 IPR000620 Drug/metabolite transporter A388_03509 IPR001537 tRNA/rRNA methyltransferase, SpoU type A388_03509 IPR004441 RNA methyltransferase TrmH family A388_03509 IPR013123 RNA 2-O ribose methyltransferase, substrate binding A388_03509 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB A388_03509 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal A388_03509 IPR029028 Alpha/beta knot methyltransferases A388_03509 IPR029064 50S ribosomal protein L30e-like A388_03510 IPR009664 Protein of unknown function DUF1255 A388_03510 IPR011051 RmlC-like cupin domain A388_03510 IPR014710 RmlC-like jelly roll fold A388_03511 IPR011990 Tetratricopeptide-like helical domain A388_03511 IPR019734 Tetratricopeptide repeat A388_03512 IPR003395 RecF/RecN/SMC, N-terminal A388_03512 IPR004604 DNA recombination/repair protein RecN A388_03512 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03513 IPR003774 Protein of unknown function UPF0301 A388_03514 IPR005227 Resolvase, holliday junction-type, YqgF-like A388_03514 IPR006641 YqgF/RNase H-like domain A388_03514 IPR012337 Ribonuclease H-like domain A388_03514 IPR037027 A388_03514 A388_03515 IPR039562 A388_03515 A388_03516 IPR012451 Protein of unknown function DUF1656 A388_03517 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein A388_03518 IPR025668 Transposase DDE domain A388_03519 IPR005471 Transcription regulator IclR, N-terminal A388_03519 IPR014757 Transcription regulator IclR, C-terminal A388_03519 IPR029016 GAF domain-like A388_03519 IPR036388 A388_03519 A388_03519 IPR036390 A388_03519 A388_03520 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like A388_03520 IPR037151 A388_03520 A388_03521 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site A388_03521 IPR009057 Homeodomain-like A388_03521 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding A388_03521 IPR018060 DNA binding HTH domain, AraC-type A388_03521 IPR036217 A388_03521 A388_03521 IPR036388 A388_03521 A388_03521 IPR036631 A388_03521 A388_03522 IPR000462 CDP-alcohol phosphatidyltransferase A388_03522 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase A388_03523 IPR029069 HotDog domain A388_03524 IPR000305 GIY-YIG nuclease superfamily A388_03524 IPR001162 UvrC family homology region A388_03524 IPR001943 UVR domain A388_03524 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 A388_03524 IPR004791 UvrABC system, subunit C A388_03524 IPR010994 RuvA domain 2-like A388_03524 IPR035901 A388_03524 A388_03524 IPR036876 A388_03524 A388_03524 IPR038476 A388_03524 A388_03526 IPR007803 Arginine/Asparagine/Proline hydroxylase A388_03526 IPR027443 Isopenicillin N synthase-like A388_03528 IPR001753 Crotonase superfamily A388_03528 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal A388_03528 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding A388_03528 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site A388_03528 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like A388_03528 IPR012799 Fatty oxidation complex, alpha subunit FadB A388_03528 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site A388_03528 IPR029045 ClpP/crotonase-like domain A388_03528 IPR036291 A388_03528 A388_03529 IPR002155 Thiolase A388_03529 IPR012805 Acetyl-CoA C-acyltransferase FadA A388_03529 IPR016039 Thiolase-like A388_03529 IPR020610 Thiolase, active site A388_03529 IPR020613 Thiolase, conserved site A388_03529 IPR020615 Thiolase, acyl-enzyme intermediate active site A388_03529 IPR020616 Thiolase, N-terminal A388_03529 IPR020617 Thiolase, C-terminal A388_03531 IPR010662 Putative hydrolase RBBP9/YdeN A388_03531 IPR029058 Alpha/Beta hydrolase fold A388_03532 IPR000551 MerR-type HTH domain A388_03532 IPR009061 DNA binding domain, putative A388_03534 IPR001853 DSBA-like thioredoxin domain A388_03534 IPR036249 A388_03534 A388_03537 IPR001404 Heat shock protein Hsp90 family A388_03537 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_03537 IPR020568 Ribosomal protein S5 domain 2-type fold A388_03537 IPR020575 Heat shock protein Hsp90, N-terminal A388_03537 IPR036890 A388_03537 A388_03537 IPR037196 A388_03537 A388_03538 IPR009739 Protein of unknown function DUF1311 A388_03539 IPR005618 Outer membrane protein, OmpW A388_03539 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel A388_03540 IPR018461 Na+/H+ antiporter, NhaC-like A388_03540 IPR032813 A388_03540 A388_03541 IPR000073 Alpha/beta hydrolase fold-1 A388_03541 IPR000639 Epoxide hydrolase-like A388_03541 IPR029058 Alpha/Beta hydrolase fold A388_03542 IPR027961 Protein of unknown function DUF4442 A388_03542 IPR029069 HotDog domain A388_03543 IPR027367 YMGG-like Gly-zipper A388_03545 IPR000722 RNA polymerase, alpha subunit A388_03545 IPR006592 RNA polymerase, N-terminal A388_03545 IPR007066 RNA polymerase Rpb1, domain 3 A388_03545 IPR007080 RNA polymerase Rpb1, domain 1 A388_03545 IPR007081 RNA polymerase Rpb1, domain 5 A388_03545 IPR007083 RNA polymerase Rpb1, domain 4 A388_03545 IPR012754 DNA-directed RNA polymerase, subunit beta-prime A388_03545 IPR038120 A388_03545 A388_03546 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 A388_03546 IPR007121 RNA polymerase, beta subunit, conserved site A388_03546 IPR007641 RNA polymerase Rpb2, domain 7 A388_03546 IPR007642 RNA polymerase Rpb2, domain 2 A388_03546 IPR007644 RNA polymerase, beta subunit, protrusion A388_03546 IPR007645 RNA polymerase Rpb2, domain 3 A388_03546 IPR010243 DNA-directed RNA polymerase, beta subunit A388_03546 IPR014724 RNA polymerase Rpb2, OB-fold A388_03546 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain A388_03546 IPR037033 A388_03546 A388_03546 IPR037034 A388_03546 A388_03547 IPR000206 Ribosomal protein L7/L12 A388_03547 IPR008932 Ribosomal protein L7/L12, oligomerisation A388_03547 IPR013823 Ribosomal protein L7/L12, C-terminal A388_03547 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like A388_03547 IPR036235 A388_03547 A388_03548 IPR001790 Ribosomal protein L10/acidic P0 A388_03548 IPR002363 Ribosomal protein L10, eubacterial, conserved site A388_03548 IPR022973 Ribosomal protein L10 A388_03549 IPR002143 Ribosomal protein L1 A388_03549 IPR005878 Ribosomal protein L1, bacterial-type A388_03549 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich A388_03549 IPR023673 Ribosomal protein L1, conserved site A388_03549 IPR023674 Ribosomal protein L1-like A388_03549 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein A388_03550 IPR000911 Ribosomal protein L11/L12 A388_03550 IPR006519 Ribosomal protein L11, bacterial-type A388_03550 IPR020783 Ribosomal protein L11, C-terminal A388_03550 IPR020784 Ribosomal protein L11, N-terminal A388_03550 IPR020785 Ribosomal protein L11, conserved site A388_03550 IPR036769 A388_03550 A388_03550 IPR036796 A388_03550 A388_03551 IPR001062 Transcription antitermination protein, NusG A388_03551 IPR005824 KOW A388_03551 IPR006645 NusG, N-terminal A388_03551 IPR008991 Translation protein SH3-like domain A388_03551 IPR014722 Ribosomal protein L2 domain 2 A388_03551 IPR036735 A388_03551 A388_03552 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit A388_03552 IPR005807 SecE subunit of protein translocation complex A388_03552 IPR038379 A388_03552 A388_03554 IPR000795 Elongation factor, GTP-binding domain A388_03554 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal A388_03554 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 A388_03554 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle A388_03554 IPR005225 Small GTP-binding protein domain A388_03554 IPR009000 Translation protein, beta-barrel domain A388_03554 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal A388_03554 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03554 IPR031157 A388_03554 A388_03559 IPR005256 Anthranilate synthase component I, PabB-like A388_03559 IPR005801 ADC synthase A388_03559 IPR006805 Anthranilate synthase component I, N-terminal A388_03559 IPR015890 Chorismate binding, C-terminal A388_03559 IPR019999 Anthranilate synthase component I - like A388_03560 IPR006346 2-phosphoglycolate phosphatase, prokaryotic A388_03560 IPR006439 HAD hydrolase, subfamily IA A388_03560 IPR023198 Phosphoglycolate phosphatase, domain 2 A388_03560 IPR023214 HAD-like domain A388_03560 IPR036412 A388_03560 A388_03561 IPR000253 Forkhead-associated (FHA) domain A388_03561 IPR008984 SMAD/FHA domain A388_03562 IPR001775 GspD/PilQ family A388_03562 IPR004845 Type II secretion system GspD, conserved site A388_03562 IPR004846 Type II/III secretion system A388_03562 IPR005644 NolW-like A388_03562 IPR013356 Type II secretion system GspD A388_03562 IPR038591 A388_03562 A388_03563 IPR001478 PDZ domain A388_03563 IPR024961 A388_03563 A388_03563 IPR036034 A388_03563 A388_03564 IPR022792 Type II secretion system, protein N A388_03565 IPR001801 Histone-like protein H-NS A388_03565 IPR027444 Histone-like protein H-NS, C-terminal domain A388_03565 IPR037150 A388_03565 A388_03566 IPR029069 HotDog domain A388_03569 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase A388_03569 IPR036108 A388_03569 A388_03570 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase A388_03570 IPR022417 Porphobilinogen deaminase, N-terminal A388_03570 IPR022418 Porphobilinogen deaminase, C-terminal A388_03570 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site A388_03570 IPR036803 A388_03570 A388_03571 IPR001789 Signal transduction response regulator, receiver domain A388_03571 IPR007492 LytTR DNA-binding domain A388_03571 IPR011006 CheY-like superfamily A388_03572 IPR010559 Signal transduction histidine kinase, internal region A388_03572 IPR036890 A388_03572 A388_03573 IPR000362 Fumarate lyase family A388_03573 IPR008948 L-Aspartase-like A388_03573 IPR009049 Argininosuccinate lyase A388_03573 IPR020557 Fumarate lyase, conserved site A388_03573 IPR022761 Fumarate lyase, N-terminal A388_03573 IPR024083 Fumarase/histidase, N-terminal A388_03573 IPR029419 Argininosuccinate lyase, C-terminal A388_03574 IPR007457 Fe(II) trafficking protein YggX A388_03574 IPR036766 A388_03574 A388_03575 IPR026022 PhoU domain A388_03575 IPR028366 Phosphate transport system protein PhoU A388_03575 IPR038078 A388_03575 A388_03576 IPR003423 Outer membrane efflux protein A388_03576 IPR010130 Type I secretion outer membrane protein, TolC A388_03577 IPR000620 Drug/metabolite transporter A388_03578 IPR001647 DNA-binding HTH domain, TetR-type A388_03578 IPR009057 Homeodomain-like A388_03578 IPR036271 A388_03578 A388_03580 IPR002817 Thiamine biosynthesis protein ThiC A388_03580 IPR025747 ThiC-associated domain A388_03580 IPR037509 A388_03580 A388_03580 IPR038521 A388_03580 A388_03581 IPR000086 NUDIX hydrolase domain A388_03581 IPR004385 Nucleoside diphosphate pyrophosphatase A388_03581 IPR015797 NUDIX hydrolase domain-like A388_03581 IPR020084 NUDIX hydrolase, conserved site A388_03582 IPR004843 Calcineurin-like phosphoesterase domain, apaH type A388_03582 IPR013622 Calcineurin-like phosphoesterase C-terminal A388_03582 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA A388_03582 IPR029052 Metallo-dependent phosphatase-like A388_03583 IPR000962 Zinc finger, DksA/TraR C4-type A388_03583 IPR012784 RNA polymerase-binding transcription factor DksA A388_03583 IPR020458 Zinc finger, DksA/TraR C4-type conserved site A388_03583 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria A388_03583 IPR037187 A388_03583 A388_03584 IPR000924 Glutamyl/glutaminyl-tRNA synthetase A388_03584 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold A388_03584 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain A388_03584 IPR022380 Glutamyl-Q tRNA(Asp) synthetase A388_03585 IPR001182 Cell cycle protein FtsW/RodA A388_03585 IPR013437 Cell division protein FtsW A388_03585 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site A388_03586 IPR004101 Mur ligase, C-terminal A388_03586 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase A388_03586 IPR013221 Mur ligase, central A388_03586 IPR036565 A388_03586 A388_03586 IPR036615 A388_03586 A388_03588 IPR006073 GTP binding domain A388_03588 IPR011640 Ferrous iron transport protein B, C-terminal A388_03588 IPR011642 Nucleoside recognition Gate A388_03588 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03588 IPR030389 A388_03588 A388_03589 IPR007167 Ferrous iron transporter FeoA domain A388_03589 IPR008988 Transcriptional repressor, C-terminal A388_03589 IPR038157 A388_03589 A388_03590 IPR002104 Integrase, catalytic A388_03590 IPR004107 Integrase, SAM-like, N-terminal A388_03590 IPR010998 Integrase, Lambda-type, N-terminal A388_03590 IPR011010 DNA breaking-rejoining enzyme, catalytic core A388_03590 IPR011932 Tyrosine recombinase XerD A388_03590 IPR013762 Integrase-like, catalytic core A388_03590 IPR023009 Tyrosine recombinase XerC/XerD A388_03591 IPR009094 Disulphide bond isomerase, DsbC, N-terminal A388_03591 IPR012336 Thioredoxin-like fold A388_03591 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal A388_03591 IPR036249 A388_03591 A388_03592 IPR001342 Homoserine dehydrogenase, catalytic A388_03592 IPR002912 ACT domain A388_03592 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding A388_03592 IPR016204 Homoserine dehydrogenase A388_03592 IPR019811 Homoserine dehydrogenase, conserved site A388_03592 IPR036291 A388_03592 A388_03593 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site A388_03593 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme A388_03593 IPR004450 Threonine synthase-like A388_03593 IPR026260 Threonine synthase, bacterial/archaeal A388_03593 IPR036052 A388_03593 A388_03594 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal A388_03594 IPR012338 Beta-lactamase/transpeptidase-like A388_03594 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A A388_03595 IPR000792 Transcription regulator LuxR, C-terminal A388_03595 IPR001789 Signal transduction response regulator, receiver domain A388_03595 IPR011006 CheY-like superfamily A388_03596 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_03596 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain A388_03596 IPR004358 Signal transduction histidine kinase-related protein, C-terminal A388_03596 IPR013767 PAS fold A388_03596 IPR035965 A388_03596 A388_03596 IPR036097 A388_03596 A388_03596 IPR036890 A388_03596 A388_03597 IPR001789 Signal transduction response regulator, receiver domain A388_03597 IPR002078 RNA polymerase sigma factor 54 interaction domain A388_03597 IPR002197 DNA binding HTH domain, Fis-type A388_03597 IPR003593 AAA+ ATPase domain A388_03597 IPR009057 Homeodomain-like A388_03597 IPR011006 CheY-like superfamily A388_03597 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 A388_03597 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 A388_03597 IPR025944 Sigma-54 interaction domain, conserved site A388_03597 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03598 IPR004447 C-terminal-processing peptidase S41A A388_03598 IPR005151 Tail specific protease A388_03598 IPR029045 ClpP/crotonase-like domain A388_03598 IPR036034 A388_03598 A388_03599 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent A388_03599 IPR006124 Metalloenzyme A388_03599 IPR011258 BPG-independent PGAM, N-terminal A388_03599 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha A388_03599 IPR017850 Alkaline-phosphatase-like, core domain A388_03599 IPR036646 A388_03599 A388_03600 IPR005495 Permease YjgP/YjgQ, predicted A388_03600 IPR030923 A388_03600 A388_03601 IPR005495 Permease YjgP/YjgQ, predicted A388_03601 IPR030922 A388_03601 A388_03602 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal A388_03602 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal A388_03602 IPR011356 Leucine aminopeptidase/peptidase B A388_03602 IPR023042 Peptidase M17, leucine aminopeptidase A388_03603 IPR007459 DNA polymerase III chi subunit, HolC A388_03603 IPR036768 A388_03603 A388_03606 IPR001783 Lumazine-binding protein A388_03606 IPR017938 Riboflavin synthase-like beta-barrel A388_03606 IPR023366 ATP synthase subunit alpha-like domain A388_03606 IPR026017 Lumazine-binding domain A388_03607 IPR002052 DNA methylase, N-6 adenine-specific, conserved site A388_03607 IPR012327 D12 class N6 adenine-specific DNA methyltransferase A388_03607 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_03608 IPR002125 CMP/dCMP deaminase, zinc-binding A388_03608 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal A388_03608 IPR004794 Riboflavin biosynthesis protein RibD A388_03608 IPR011549 Riboflavin-specific deaminase, C-terminal A388_03608 IPR016192 APOBEC/CMP deaminase, zinc-binding A388_03608 IPR016193 Cytidine deaminase-like A388_03608 IPR024072 Dihydrofolate reductase-like domain A388_03609 IPR003796 Ribonucleotide reductase regulator NrdR-like A388_03609 IPR005144 ATP-cone A388_03610 IPR001905 Ammonium transporter A388_03610 IPR002229 Blood group Rhesus C/E/D polypeptide A388_03610 IPR018047 Ammonium transporter, conserved site A388_03610 IPR024041 Ammonium transporter AmtB-like domain A388_03610 IPR029020 Ammonium/urea transporter A388_03611 IPR002187 Nitrogen regulatory protein PII A388_03611 IPR002332 Nitrogen regulatory protein P-II, urydylation site A388_03611 IPR011322 Nitrogen regulatory PII-like, alpha/beta A388_03611 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal A388_03611 IPR017918 Nitrogen regulatory protein PII, conserved site A388_03612 IPR007475 Membrane fusogenic activity A388_03613 IPR007746 MerE A388_03615 IPR002645 STAS domain A388_03615 IPR011547 Sulphate transporter A388_03615 IPR018045 Sulphate anion transporter, conserved site A388_03615 IPR036513 A388_03615 A388_03617 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 A388_03617 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger A388_03617 IPR032877 A388_03617 A388_03618 IPR001872 Peptidase A8, signal peptidase II A388_03619 IPR002524 Cation efflux protein A388_03619 IPR027469 Cation efflux protein transmembrane domain A388_03619 IPR036163 A388_03619 A388_03620 IPR000551 MerR-type HTH domain A388_03620 IPR009061 DNA binding domain, putative A388_03620 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator A388_03621 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI A388_03622 IPR006118 Recombinase, conserved site A388_03622 IPR006119 Resolvase, N-terminal A388_03622 IPR036162 A388_03622 A388_03625 IPR000489 Pterin-binding A388_03625 IPR006390 Dihydropteroate synthase A388_03625 IPR011005 Dihydropteroate synthase-like A388_03626 IPR000390 Small multidrug resistance protein family A388_03627 IPR002934 Nucleotidyl transferase domain A388_03627 IPR024172 Streptomycin 3''-adenylyltransferase A388_03627 IPR025184 Domain of unknown function DUF4111 A388_03628 IPR000182 GNAT domain A388_03628 IPR016181 Acyl-CoA N-acyltransferase A388_03629 IPR000182 GNAT domain A388_03629 IPR016181 Acyl-CoA N-acyltransferase A388_03630 IPR016181 Acyl-CoA N-acyltransferase A388_03630 IPR030971 A388_03630 A388_03631 IPR002104 Integrase, catalytic A388_03631 IPR004107 Integrase, SAM-like, N-terminal A388_03631 IPR010998 Integrase, Lambda-type, N-terminal A388_03631 IPR011010 DNA breaking-rejoining enzyme, catalytic core A388_03631 IPR011946 Integrase, integron-type A388_03631 IPR013762 Integrase-like, catalytic core A388_03632 IPR012337 Ribonuclease H-like domain A388_03632 IPR032874 A388_03632 A388_03633 IPR002575 Aminoglycoside phosphotransferase A388_03633 IPR011009 Protein kinase-like domain A388_03633 IPR024165 Aminoglycoside 3-phosphotransferase A388_03634 IPR012337 Ribonuclease H-like domain A388_03634 IPR032874 A388_03634 A388_03635 IPR002937 Amine oxidase A388_03635 IPR036188 A388_03635 A388_03636 IPR003829 Pirin, N-terminal domain A388_03636 IPR008778 Pirin, C-terminal domain A388_03636 IPR011051 RmlC-like cupin domain A388_03636 IPR012093 Pirin A388_03636 IPR014710 RmlC-like jelly roll fold A388_03637 IPR000868 Isochorismatase-like A388_03637 IPR036380 A388_03637 A388_03638 IPR000847 Transcription regulator HTH, LysR A388_03638 IPR005119 LysR, substrate-binding A388_03638 IPR036388 A388_03638 A388_03638 IPR036390 A388_03638 A388_03639 IPR010102 Succinate semialdehyde dehydrogenase A388_03639 IPR015590 Aldehyde dehydrogenase domain A388_03639 IPR016160 Aldehyde dehydrogenase, cysteine active site A388_03639 IPR016161 Aldehyde/histidinol dehydrogenase A388_03639 IPR016162 Aldehyde dehydrogenase, N-terminal A388_03639 IPR016163 Aldehyde dehydrogenase, C-terminal A388_03639 IPR029510 Aldehyde dehydrogenase, glutamic acid active site A388_03640 IPR004632 4-aminobutyrate aminotransferase, bacterial A388_03640 IPR005814 Aminotransferase class-III A388_03640 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_03640 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_03640 IPR015424 Pyridoxal phosphate-dependent transferase A388_03641 IPR000524 Transcription regulator HTH, GntR A388_03641 IPR004839 Aminotransferase, class I/classII A388_03641 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_03641 IPR015424 Pyridoxal phosphate-dependent transferase A388_03641 IPR036388 A388_03641 A388_03641 IPR036390 A388_03641 A388_03642 IPR002293 Amino acid/polyamine transporter I A388_03642 IPR004840 Amino acid permease, conserved site A388_03642 IPR004841 Amino acid permease/ SLC12A domain A388_03643 IPR001387 Cro/C1-type helix-turn-helix domain A388_03643 IPR010982 Lambda repressor-like, DNA-binding domain A388_03643 IPR011051 RmlC-like cupin domain A388_03643 IPR013096 Cupin 2, conserved barrel A388_03643 IPR014710 RmlC-like jelly roll fold A388_03644 IPR011606 Branched-chain amino acid transport, permease A388_03645 IPR008407 Branched-chain amino acid transport, AzlD A388_03646 IPR000424 Primosome PriB/single-strand DNA-binding A388_03646 IPR011344 Single-stranded DNA-binding protein A388_03646 IPR012340 Nucleic acid-binding, OB-fold A388_03647 IPR011701 Major facilitator superfamily A388_03647 IPR036259 A388_03647 A388_03648 IPR007427 Protein of unknown function DUF475 A388_03649 IPR004305 Thiaminase-2/PQQC A388_03649 IPR016084 Haem oxygenase-like, multi-helical A388_03649 IPR027574 Thiaminase II A388_03650 IPR009707 GlpM A388_03651 IPR009732 Protein of unknown function DUF1304 A388_03652 IPR011032 GroES (chaperonin 10)-like A388_03652 IPR013149 Alcohol dehydrogenase, C-terminal A388_03652 IPR013154 Alcohol dehydrogenase GroES-like A388_03652 IPR020843 Polyketide synthase, enoylreductase A388_03652 IPR036291 A388_03652 A388_03653 IPR001647 DNA-binding HTH domain, TetR-type A388_03653 IPR009057 Homeodomain-like A388_03653 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal A388_03653 IPR036271 A388_03653 A388_03654 IPR003439 ABC transporter-like A388_03654 IPR004602 UvrABC system subunit A A388_03654 IPR017871 ABC transporter, conserved site A388_03654 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03655 IPR000160 GGDEF domain A388_03655 IPR029787 Nucleotide cyclase A388_03656 IPR031593 A388_03656 A388_03657 IPR000060 BCCT transporter family A388_03657 IPR018093 BCCT transporter, conserved site A388_03658 IPR013099 Two pore domain potassium channel domain A388_03659 IPR001734 Sodium/solute symporter A388_03659 IPR018212 Sodium/solute symporter, conserved site A388_03659 IPR038377 A388_03659 A388_03660 IPR007436 Protein of unknown function DUF485 A388_03661 IPR001789 Signal transduction response regulator, receiver domain A388_03661 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_03661 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain A388_03661 IPR004358 Signal transduction histidine kinase-related protein, C-terminal A388_03661 IPR011006 CheY-like superfamily A388_03661 IPR035965 A388_03661 A388_03661 IPR036097 A388_03661 A388_03661 IPR036890 A388_03661 A388_03661 IPR038377 A388_03661 A388_03663 IPR000792 Transcription regulator LuxR, C-terminal A388_03663 IPR001789 Signal transduction response regulator, receiver domain A388_03663 IPR011006 CheY-like superfamily A388_03663 IPR016032 Signal transduction response regulator, C-terminal effector A388_03664 IPR005025 NADPH-dependent FMN reductase-like A388_03664 IPR019912 FMN reductase, MsuE-like A388_03664 IPR029039 Flavoprotein-like A388_03665 IPR011251 Luciferase-like domain A388_03665 IPR024014 Dimethyl sulphone monooxygenase SfnG A388_03665 IPR036661 A388_03665 A388_03666 IPR000485 AsnC-type HTH domain A388_03666 IPR011008 Dimeric alpha-beta barrel A388_03666 IPR019888 Transcription regulator AsnC-type A388_03666 IPR036388 A388_03666 A388_03666 IPR036390 A388_03666 A388_03667 IPR000868 Isochorismatase-like A388_03667 IPR036380 A388_03667 A388_03668 IPR000873 AMP-dependent synthetase/ligase A388_03668 IPR011904 Acetate-CoA ligase A388_03668 IPR020845 AMP-binding, conserved site A388_03668 IPR025110 AMP-binding enzyme C-terminal domain A388_03668 IPR032387 A388_03668 A388_03669 IPR008523 Lactobacillus phage LBR48, DUF805 A388_03670 IPR006685 Mechanosensitive ion channel MscS A388_03670 IPR010920 Like-Sm (LSM) domain A388_03670 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 A388_03670 IPR011066 Mechanosensitive ion channel MscS, C-terminal A388_03670 IPR023408 A388_03670 A388_03671 IPR006700 Ribosomal RNA small subunit methyltransferase E A388_03671 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal A388_03671 IPR029028 Alpha/beta knot methyltransferases A388_03672 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal A388_03672 IPR038107 A388_03672 A388_03673 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal A388_03673 IPR013785 Aldolase-type TIM barrel A388_03674 IPR001845 HTH ArsR-type DNA-binding domain A388_03674 IPR036388 A388_03674 A388_03674 IPR036390 A388_03674 A388_03676 IPR000352 Peptide chain release factor class I/class II A388_03676 IPR004374 Peptide chain release factor 2 A388_03676 IPR005139 Peptide chain release factor A388_03677 IPR031593 A388_03677 A388_03678 IPR001667 DDH domain A388_03678 IPR003156 DHHA1 domain A388_03678 IPR004610 Bacterial RecJ exonuclease A388_03678 IPR038763 A388_03678 A388_03679 IPR000659 Pyridoxamine 5'-phosphate oxidase A388_03679 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain A388_03679 IPR012349 FMN-binding split barrel A388_03679 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal A388_03679 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site A388_03680 IPR005841 Alpha-D-phosphohexomutase superfamily A388_03680 IPR005843 Alpha-D-phosphohexomutase, C-terminal A388_03680 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I A388_03680 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II A388_03680 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III A388_03680 IPR006352 Phosphoglucosamine mutase A388_03680 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III A388_03680 IPR016066 Alpha-D-phosphohexomutase, conserved site A388_03680 IPR036900 A388_03680 A388_03681 IPR000644 CBS domain A388_03681 IPR001093 IMP dehydrogenase/GMP reductase A388_03681 IPR005990 Inosine-5'-monophosphate dehydrogenase A388_03681 IPR013785 Aldolase-type TIM barrel A388_03681 IPR015875 IMP dehydrogenase / GMP reductase, conserved site A388_03682 IPR005358 Putative zinc- or iron-chelating domain containing protein A388_03683 IPR001279 Beta-lactamase-like A388_03683 IPR036866 A388_03683 A388_03684 IPR000531 TonB-dependent receptor, beta-barrel A388_03684 IPR010105 TonB-dependent siderophore receptor A388_03684 IPR012910 TonB-dependent receptor, plug A388_03684 IPR036942 A388_03684 A388_03684 IPR037066 A388_03684 A388_03685 IPR001727 Uncharacterised protein family UPF0016 A388_03687 IPR000089 Biotin/lipoyl attachment A388_03687 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain A388_03687 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site A388_03687 IPR004167 E3 binding A388_03687 IPR011053 Single hybrid motif A388_03687 IPR023213 Chloramphenicol acetyltransferase-like domain A388_03687 IPR036625 A388_03687 A388_03688 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type A388_03688 IPR005474 Transketolase, N-terminal A388_03688 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II A388_03688 IPR029061 Thiamin diphosphate-binding fold A388_03689 IPR011055 Duplicated hybrid motif A388_03689 IPR016047 Peptidase M23 A388_03690 IPR007922 Protein of unknown function DUF721/UPF0232 A388_03691 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase A388_03691 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal A388_03691 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal A388_03691 IPR020568 Ribosomal protein S5 domain 2-type fold A388_03692 IPR000158 Cell division protein FtsZ A388_03692 IPR003008 Tubulin/FtsZ, GTPase domain A388_03692 IPR008280 Tubulin/FtsZ, C-terminal A388_03692 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain A388_03692 IPR020805 Cell division protein FtsZ, conserved site A388_03692 IPR024757 Cell division protein FtsZ, C-terminal A388_03692 IPR036525 A388_03692 A388_03692 IPR037103 A388_03692 A388_03693 IPR003494 SHS2 domain inserted in FtsA A388_03693 IPR020823 Cell division protein FtsA A388_03694 IPR005548 Cell division protein FtsQ/DivIB A388_03694 IPR013685 Polypeptide-transport-associated, FtsQ-type A388_03694 IPR026579 Cell division protein FtsQ A388_03695 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site A388_03695 IPR005905 D-alanine--D-alanine ligase A388_03695 IPR011095 D-alanine--D-alanine ligase, C-terminal A388_03695 IPR011127 D-alanine--D-alanine ligase, N-terminal domain A388_03695 IPR013815 ATP-grasp fold, subdomain 1 A388_03695 IPR016185 Pre-ATP-grasp domain A388_03696 IPR000713 Mur ligase, N-terminal A388_03696 IPR004101 Mur ligase, C-terminal A388_03696 IPR005758 UDP-N-acetylmuramate-alanine ligase A388_03696 IPR013221 Mur ligase, central A388_03696 IPR036565 A388_03696 A388_03696 IPR036615 A388_03696 A388_03697 IPR004276 Glycosyl transferase, family 28 A388_03697 IPR006009 N-acetylglucosaminyltransferase, MurG A388_03697 IPR007235 Glycosyl transferase, family 28, C-terminal A388_03698 IPR004215 Prokaryotic glutathione synthetase, N-terminal A388_03698 IPR004218 Prokaryotic glutathione synthetase, ATP-binding A388_03698 IPR006284 Glutathione synthetase, prokaryotic A388_03698 IPR013815 ATP-grasp fold, subdomain 1 A388_03698 IPR016185 Pre-ATP-grasp domain A388_03699 IPR013619 Domain of unknown function DUF1737 A388_03700 IPR000531 TonB-dependent receptor, beta-barrel A388_03700 IPR010105 TonB-dependent siderophore receptor A388_03700 IPR012910 TonB-dependent receptor, plug A388_03700 IPR036942 A388_03700 A388_03700 IPR037066 A388_03700 A388_03701 IPR000836 Phosphoribosyltransferase domain A388_03701 IPR004467 Orotate phosphoribosyl transferase domain A388_03701 IPR023031 Orotate phosphoribosyltransferase A388_03701 IPR029057 Phosphoribosyltransferase-like A388_03702 IPR004808 AP endonuclease 1 A388_03702 IPR005135 Endonuclease/exonuclease/phosphatase A388_03702 IPR036691 A388_03702 A388_03703 IPR006504 Transcriptional regulator Spx/MgsR A388_03703 IPR006660 Arsenate reductase-like A388_03703 IPR036249 A388_03703 A388_03704 IPR019223 Domain of unknown function DUF2147 A388_03705 IPR002168 Lipase, GDXG, active site A388_03705 IPR013094 Alpha/beta hydrolase fold-3 A388_03705 IPR029058 Alpha/Beta hydrolase fold A388_03705 IPR033140 A388_03705 A388_03706 IPR000160 GGDEF domain A388_03706 IPR029787 Nucleotide cyclase A388_03707 IPR003834 Cytochrome c assembly protein, transmembrane domain A388_03707 IPR013766 Thioredoxin domain A388_03707 IPR017937 Thioredoxin, conserved site A388_03707 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain A388_03707 IPR036249 A388_03707 A388_03707 IPR036929 A388_03707 A388_03708 IPR025737 MetA-pathway of phenol degradation, putative A388_03709 IPR036770 A388_03709 A388_03710 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein A388_03710 IPR036567 A388_03710 A388_03711 IPR002509 Polysaccharide deacetylase A388_03711 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel A388_03711 IPR017625 Putative urate catabolism protein A388_03712 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 A388_03712 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase A388_03712 IPR036778 A388_03712 A388_03713 IPR000895 Transthyretin/hydroxyisourate hydrolase A388_03713 IPR014306 Hydroxyisourate hydrolase A388_03713 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily A388_03713 IPR023418 Transthyretin, thyroxine binding site A388_03713 IPR036817 A388_03713 A388_03714 IPR006042 Xanthine/uracil permease A388_03714 IPR006043 Xanthine/uracil/vitamin C permease A388_03714 IPR017588 Xanthine permease A388_03715 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like A388_03715 IPR036777 A388_03715 A388_03716 IPR002938 Monooxygenase, FAD-binding A388_03716 IPR036188 A388_03716 A388_03717 IPR005164 Allantoicase A388_03717 IPR008979 Galactose-binding domain-like A388_03717 IPR015908 Allantoicase domain A388_03718 IPR007247 Ureidoglycolate hydrolase A388_03718 IPR011051 RmlC-like cupin domain A388_03718 IPR024060 Ureidoglycolate hydrolase domain A388_03719 IPR001241 DNA topoisomerase, type IIA A388_03719 IPR002288 DNA gyrase B subunit, C-terminal A388_03719 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_03719 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative A388_03719 IPR006171 Toprim domain A388_03719 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 A388_03719 IPR013759 DNA topoisomerase, type IIA, central domain A388_03719 IPR013760 DNA topoisomerase, type IIA-like domain A388_03719 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup A388_03719 IPR018522 DNA topoisomerase, type IIA, conserved site A388_03719 IPR020568 Ribosomal protein S5 domain 2-type fold A388_03719 IPR036890 A388_03719 A388_03720 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA A388_03720 IPR029058 Alpha/Beta hydrolase fold A388_03721 IPR012908 GPI inositol-deacylase PGAP1-like A388_03721 IPR029058 Alpha/Beta hydrolase fold A388_03723 IPR009739 Protein of unknown function DUF1311 A388_03726 IPR018392 LysM domain A388_03726 IPR036779 A388_03726 A388_03727 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein A388_03727 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset A388_03727 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal A388_03727 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain A388_03727 IPR037026 A388_03727 A388_03728 IPR003752 Disulphide bond formation protein DsbB/BdbC A388_03728 IPR022920 Disulphide bond formation protein DsbB A388_03728 IPR023380 Disulphide bond formation protein DsbB-like domain A388_03729 IPR006334 Glutamate--cysteine ligase, monofunctional A388_03729 IPR007370 Glutamate--cysteine ligase A388_03729 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain A388_03730 IPR010323 Protein of unknown function DUF924 A388_03730 IPR011990 Tetratricopeptide-like helical domain A388_03732 IPR007383 Protein of unknown function DUF445 A388_03733 IPR004839 Aminotransferase, class I/classII A388_03733 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_03733 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_03733 IPR015424 Pyridoxal phosphate-dependent transferase A388_03734 IPR002528 Multi antimicrobial extrusion protein A388_03735 IPR002347 Glucose/ribitol dehydrogenase A388_03735 IPR020904 Short-chain dehydrogenase/reductase, conserved site A388_03735 IPR036291 A388_03735 A388_03736 IPR009057 Homeodomain-like A388_03736 IPR036271 A388_03736 A388_03737 IPR001789 Signal transduction response regulator, receiver domain A388_03737 IPR001867 Signal transduction response regulator, C-terminal A388_03737 IPR011006 CheY-like superfamily A388_03737 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB A388_03737 IPR016032 Signal transduction response regulator, C-terminal effector A388_03737 IPR036388 A388_03737 A388_03738 IPR000014 PAS domain A388_03738 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_03738 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain A388_03738 IPR004358 Signal transduction histidine kinase-related protein, C-terminal A388_03738 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR A388_03738 IPR021766 Protein of unknown function DUF3329 A388_03738 IPR035965 A388_03738 A388_03738 IPR036097 A388_03738 A388_03738 IPR036890 A388_03738 A388_03739 IPR005152 Lipase, secreted A388_03739 IPR022742 Putative lysophospholipase A388_03739 IPR029058 Alpha/Beta hydrolase fold A388_03740 IPR003817 Phosphatidylserine decarboxylase-related A388_03740 IPR033177 A388_03740 A388_03740 IPR033178 A388_03740 A388_03741 IPR001307 Thiosulphate sulfurtransferase, conserved site A388_03741 IPR001763 Rhodanese-like domain A388_03741 IPR036873 A388_03741 A388_03742 IPR006406 Nicotinate phosphoribosyltransferase A388_03742 IPR007229 Nicotinate phosphoribosyltransferase family A388_03742 IPR036068 A388_03742 A388_03743 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase A388_03743 IPR023509 D-Tyr tRNAtyr deacylase-like domain A388_03746 IPR023214 HAD-like domain A388_03746 IPR036412 A388_03746 A388_03748 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB A388_03748 IPR017945 DHBP synthase RibB-like alpha/beta domain A388_03748 IPR032677 A388_03748 A388_03748 IPR036144 A388_03748 A388_03749 IPR002180 6,7-dimethyl-8-ribityllumazine synthase A388_03749 IPR034964 A388_03749 A388_03749 IPR036467 A388_03749 A388_03750 IPR006027 NusB/RsmB/TIM44 A388_03750 IPR011605 NusB antitermination factor A388_03750 IPR035926 A388_03750 A388_03751 IPR006283 Thiamine-monophosphate kinase A388_03751 IPR010918 AIR synthase-related protein, C-terminal domain A388_03751 IPR016188 PurM, N-terminal-like A388_03751 IPR036676 A388_03751 A388_03751 IPR036921 A388_03751 A388_03752 IPR007686 YutG/PgpA domain A388_03752 IPR026037 Phosphatidylglycerophosphatase A A388_03752 IPR036681 A388_03752 A388_03753 IPR001451 Bacterial transferase hexapeptide repeat A388_03753 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase A388_03753 IPR011004 Trimeric LpxA-like A388_03753 IPR018357 Hexapeptide transferase, conserved site A388_03753 IPR025877 MobA-like NTP transferase domain A388_03753 IPR029044 Nucleotide-diphospho-sugar transferases A388_03754 IPR001347 Sugar isomerase (SIS) A388_03754 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising A388_03754 IPR029055 Nucleophile aminohydrolases, N-terminal A388_03756 IPR003594 Histidine kinase-like ATPase, C-terminal domain A388_03756 IPR036890 A388_03756 A388_03757 IPR001525 C-5 cytosine methyltransferase A388_03757 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_03759 IPR001920 Asp/Glu racemase A388_03759 IPR004391 Glutamate racemase A388_03759 IPR015942 Asp/Glu/hydantoin racemase A388_03759 IPR018187 Asp/Glu racemase, active site A388_03759 IPR033134 A388_03759 A388_03760 IPR006439 HAD hydrolase, subfamily IA A388_03760 IPR023198 Phosphoglycolate phosphatase, domain 2 A388_03760 IPR023214 HAD-like domain A388_03760 IPR036412 A388_03760 A388_03761 IPR010281 Protein of unknown function DUF885 A388_03762 IPR005923 Formiminoglutamase A388_03762 IPR006035 Ureohydrolase A388_03762 IPR020855 Ureohydrolase, manganese-binding site A388_03762 IPR023696 Ureohydrolase domain A388_03763 IPR005920 Imidazolonepropionase A388_03763 IPR006680 Amidohydrolase 1 A388_03763 IPR011059 Metal-dependent hydrolase, composite domain A388_03763 IPR032466 A388_03763 A388_03764 IPR002293 Amino acid/polyamine transporter I A388_03764 IPR004840 Amino acid permease, conserved site A388_03764 IPR004841 Amino acid permease/ SLC12A domain A388_03765 IPR001106 Aromatic amino acid lyase A388_03765 IPR005921 Histidine ammonia-lyase A388_03765 IPR008948 L-Aspartase-like A388_03765 IPR022313 Phenylalanine/histidine ammonia-lyases, active site A388_03765 IPR024083 Fumarase/histidase, N-terminal A388_03766 IPR023636 Urocanase conserved site A388_03766 IPR023637 Urocanase A388_03766 IPR035085 A388_03766 A388_03766 IPR035400 A388_03766 A388_03766 IPR035401 A388_03766 A388_03766 IPR036190 A388_03766 A388_03766 IPR038364 A388_03766 A388_03767 IPR010282 Uncharacterised protein family HutD/Ves A388_03767 IPR011051 RmlC-like cupin domain A388_03767 IPR014710 RmlC-like jelly roll fold A388_03768 IPR000524 Transcription regulator HTH, GntR A388_03768 IPR010248 Histidine utilization repressor A388_03768 IPR011663 UbiC transcription regulator-associated A388_03768 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain A388_03768 IPR036388 A388_03768 A388_03768 IPR036390 A388_03768 A388_03769 IPR002656 Acyltransferase 3 A388_03770 IPR003495 CobW/HypB/UreG domain A388_03770 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal A388_03770 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03771 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain A388_03771 IPR013230 Peptidase M15A, C-terminal A388_03772 IPR002293 Amino acid/polyamine transporter I A388_03772 IPR004840 Amino acid permease, conserved site A388_03772 IPR004841 Amino acid permease/ SLC12A domain A388_03773 IPR005959 Fumarylacetoacetase A388_03773 IPR011234 Fumarylacetoacetase, C-terminal-related A388_03773 IPR015377 Fumarylacetoacetase, N-terminal A388_03773 IPR036462 A388_03773 A388_03773 IPR036663 A388_03773 A388_03774 IPR004045 Glutathione S-transferase, N-terminal A388_03774 IPR004046 Glutathione S-transferase, C-terminal A388_03774 IPR005955 Maleylacetoacetate isomerase A388_03774 IPR036249 A388_03774 A388_03774 IPR036282 A388_03774 A388_03775 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II A388_03775 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain A388_03775 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase A388_03776 IPR005471 Transcription regulator IclR, N-terminal A388_03776 IPR014757 Transcription regulator IclR, C-terminal A388_03776 IPR029016 GAF domain-like A388_03776 IPR036388 A388_03776 A388_03776 IPR036390 A388_03776 A388_03777 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain A388_03777 IPR005956 4-hydroxyphenylpyruvate dioxygenase A388_03777 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase A388_03778 IPR007553 Domain of unknown function DUF523 A388_03779 IPR002528 Multi antimicrobial extrusion protein A388_03780 IPR002657 Bile acid:sodium symporter A388_03780 IPR038770 A388_03780 A388_03781 IPR000868 Isochorismatase-like A388_03781 IPR036380 A388_03781 A388_03782 IPR002220 DapA-like A388_03782 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA A388_03782 IPR013785 Aldolase-type TIM barrel A388_03782 IPR020624 Dihydrodipicolinate synthetase, conserved site A388_03782 IPR020625 Dihydrodipicolinate synthetase, active site A388_03784 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase A388_03784 IPR018236 SAICAR synthetase, conserved site A388_03784 IPR028923 SAICAR synthetase/ADE2, N-terminal A388_03786 IPR000292 Formate/nitrite transporter A388_03786 IPR023271 Aquaporin-like A388_03787 IPR003593 AAA+ ATPase domain A388_03787 IPR003959 ATPase, AAA-type, core A388_03787 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal A388_03787 IPR021886 MgsA AAA+ ATPase C-terminal A388_03787 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_03787 IPR032423 A388_03787 A388_03788 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase A388_03788 IPR011042 Six-bladed beta-propeller, TolB-like A388_03788 IPR012938 Glucose/Sorbosone dehydrogenase A388_03789 IPR005358 Putative zinc- or iron-chelating domain containing protein A388_03789 IPR008228 Uncharacterised conserved protein UCP006173 A388_03790 IPR009760 Protein of unknown function DUF1328 A388_03791 IPR002925 Dienelactone hydrolase A388_03791 IPR029058 Alpha/Beta hydrolase fold A388_03792 IPR001310 Histidine triad (HIT) protein A388_03792 IPR036265 A388_03792 A388_03793 IPR000445 Helix-hairpin-helix motif A388_03793 IPR003265 HhH-GPD domain A388_03793 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif A388_03793 IPR004035 Endonuclease III, iron-sulphur binding site A388_03793 IPR004036 Endonuclease III-like, conserved site-2 A388_03793 IPR005760 A/G-specific adenine glycosylase MutY A388_03793 IPR011257 DNA glycosylase A388_03793 IPR015797 NUDIX hydrolase domain-like A388_03793 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal A388_03793 IPR029119 MutY, C-terminal A388_03794 IPR011055 Duplicated hybrid motif A388_03794 IPR016047 Peptidase M23 A388_03796 IPR005019 Methyladenine glycosylase A388_03796 IPR011257 DNA glycosylase A388_03797 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site A388_03797 IPR011032 GroES (chaperonin 10)-like A388_03797 IPR013149 Alcohol dehydrogenase, C-terminal A388_03797 IPR013154 Alcohol dehydrogenase GroES-like A388_03797 IPR020843 Polyketide synthase, enoylreductase A388_03797 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 A388_03797 IPR036291 A388_03797 A388_03798 IPR000524 Transcription regulator HTH, GntR A388_03798 IPR004839 Aminotransferase, class I/classII A388_03798 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 A388_03798 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 A388_03798 IPR015424 Pyridoxal phosphate-dependent transferase A388_03798 IPR036388 A388_03798 A388_03798 IPR036390 A388_03798 A388_03800 IPR000847 Transcription regulator HTH, LysR A388_03800 IPR005119 LysR, substrate-binding A388_03800 IPR036388 A388_03800 A388_03800 IPR036390 A388_03800 A388_03801 IPR018170 Aldo/keto reductase, conserved site A388_03801 IPR020471 Aldo/keto reductase subgroup A388_03801 IPR023210 NADP-dependent oxidoreductase domain A388_03801 IPR036812 A388_03801 A388_03802 IPR011701 Major facilitator superfamily A388_03802 IPR036259 A388_03802 A388_03803 IPR002913 START domain A388_03803 IPR023393 START-like domain A388_03803 IPR028347 START domain-containing protein A388_03804 IPR000846 Dihydrodipicolinate reductase, N-terminal A388_03804 IPR022663 Dihydrodipicolinate reductase, C-terminal A388_03804 IPR022664 Dihydrodipicolinate reductase, conserved site A388_03804 IPR023940 Dihydrodipicolinate reductase, bacterial A388_03804 IPR036291 A388_03804 A388_03806 IPR001305 Heat shock protein DnaJ, cysteine-rich domain A388_03806 IPR001623 DnaJ domain A388_03806 IPR002939 Chaperone DnaJ, C-terminal A388_03806 IPR008971 HSP40/DnaJ peptide-binding A388_03806 IPR012724 Chaperone DnaJ A388_03806 IPR018253 DnaJ domain, conserved site A388_03806 IPR036410 A388_03806 A388_03806 IPR036869 A388_03806 A388_03808 IPR001036 Acriflavin resistance protein A388_03808 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains A388_03809 IPR006143 RND efflux pump, membrane fusion protein A388_03809 IPR032317 A388_03809 A388_03810 IPR001647 DNA-binding HTH domain, TetR-type A388_03810 IPR009057 Homeodomain-like A388_03810 IPR036271 A388_03810 A388_03810 IPR039536 A388_03810 A388_03811 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain A388_03811 IPR018129 Phosphoenolpyruvate carboxylase, active site A388_03811 IPR021135 Phosphoenolpyruvate carboxylase A388_03811 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type A388_03811 IPR033129 A388_03811 A388_03812 IPR006042 Xanthine/uracil permease A388_03812 IPR006043 Xanthine/uracil/vitamin C permease A388_03813 IPR000847 Transcription regulator HTH, LysR A388_03813 IPR005119 LysR, substrate-binding A388_03813 IPR036388 A388_03813 A388_03813 IPR036390 A388_03813 A388_03814 IPR002781 Transmembrane protein TauE like A388_03815 IPR036249 A388_03815 A388_03816 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase A388_03816 IPR004404 Dihydroxy-acid dehydratase A388_03816 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site A388_03816 IPR037237 A388_03816 A388_03817 IPR002376 Formyl transferase, N-terminal A388_03817 IPR005793 Formyl transferase, C-terminal A388_03817 IPR005794 Methionyl-tRNA formyltransferase A388_03817 IPR011034 Formyl transferase, C-terminal-like A388_03817 IPR036477 A388_03817 A388_03817 IPR037022 A388_03817 A388_03818 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p A388_03818 IPR004573 rRNA small subunit methyltransferase B A388_03818 IPR006027 NusB/RsmB/TIM44 A388_03818 IPR023267 RNA (C5-cytosine) methyltransferase A388_03818 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_03818 IPR031341 A388_03818 A388_03818 IPR035926 A388_03818 A388_03819 IPR031596 A388_03819 A388_03820 IPR000175 Sodium:neurotransmitter symporter A388_03820 IPR037272 A388_03820 A388_03821 IPR026387 Outer membrane protein A388_03822 IPR004045 Glutathione S-transferase, N-terminal A388_03822 IPR004046 Glutathione S-transferase, C-terminal A388_03822 IPR036249 A388_03822 A388_03822 IPR036282 A388_03822 A388_p00001 IPR000525 Initiator Rep protein A388_p00001 IPR036388 A388_p00001 A388_p00001 IPR036390 A388_p00001 A388_p00005 IPR012337 Ribonuclease H-like domain A388_p00005 IPR032874 A388_p00005 A388_p00006 IPR002575 Aminoglycoside phosphotransferase A388_p00006 IPR011009 Protein kinase-like domain A388_p00006 IPR024165 Aminoglycoside 3-phosphotransferase A388_p00007 IPR012337 Ribonuclease H-like domain A388_p00007 IPR032874 A388_p00007 A388_p00008 IPR003313 AraC-type arabinose-binding/dimerisation domain A388_p00008 IPR037923 A388_p00008 A388_p00010 IPR003220 InsA N-terminal domain A388_p00010 IPR005063 Transposase, IS1 A388_p00011 IPR001460 Penicillin-binding protein, transpeptidase A388_p00011 IPR002137 Beta-lactamase, class-D active site A388_p00011 IPR012338 Beta-lactamase/transpeptidase-like A388_p00012 IPR001584 Integrase, catalytic core A388_p00012 IPR012337 Ribonuclease H-like domain A388_p00012 IPR025948 HTH-like domain A388_p00012 IPR036397 A388_p00012 A388_p00013 IPR009057 Homeodomain-like A388_p00013 IPR036388 A388_p00013 A388_p00015 IPR006597 Sel1-like A388_p00015 IPR011990 Tetratricopeptide-like helical domain A388_p00016 IPR006118 Recombinase, conserved site A388_p00016 IPR006119 Resolvase, N-terminal A388_p00016 IPR036162 A388_p00016 A388_p00017 IPR001584 Integrase, catalytic core A388_p00017 IPR012337 Ribonuclease H-like domain A388_p00017 IPR036397 A388_p00017 A388_p00018 IPR025948 HTH-like domain A388_p00019 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family A388_p00019 IPR035093 A388_p00019 A388_p00020 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM A388_p00020 IPR036165 A388_p00020 A388_p00023 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain A388_p00023 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_p00024 IPR000525 Initiator Rep protein A388_p00024 IPR036388 A388_p00024 A388_p00024 IPR036390 A388_p00024 A388_p00025 IPR021810 Protein of unknown function DUF3387 A388_p00026 IPR003450 Replication origin-binding protein A388_p00026 IPR027417 P-loop containing nucleoside triphosphate hydrolase A388_p00027 IPR020353 Toxin YafO A388_p00029 IPR001387 Cro/C1-type helix-turn-helix domain A388_p00029 IPR010982 Lambda repressor-like, DNA-binding domain A388_p00030 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA A388_p00030 IPR000477 Reverse transcriptase domain A388_p00031 IPR003356 DNA methylase, adenine-specific A388_p00031 IPR004546 Restriction endonuclease, type I, HsdM A388_p00031 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain A388_p00031 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like A388_p00031 IPR038333 A388_p00031 A388_p00032 IPR000055 Restriction endonuclease, type I, HsdS A388_p00033 IPR012337 Ribonuclease H-like domain A388_p00033 IPR032874 A388_p00033 A388_p00034 IPR007460 Burkholderia phage Bups phi1, Orf7.3 A388_p00034 IPR038573 A388_p00034 A388_p00035 IPR025528 Protein of unknown function DUF4415 A388_p00036 IPR000531 TonB-dependent receptor, beta-barrel A388_p00036 IPR012910 TonB-dependent receptor, plug A388_p00036 IPR037066 A388_p00036