locus-tag class description NIY05_00005 IPR003593 AAA+ ATPase domain NIY05_00005 IPR001957 Chromosomal replication control, initiator DnaA NIY05_00005 IPR020591 Chromosomal replication control, initiator DnaA-like NIY05_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site NIY05_00005 IPR013317 Chromosomal replication initiator protein DnaA NIY05_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal NIY05_00005 IPR024633 DnaA N-terminal domain NIY05_00005 IPR038454 DnaA, N-terminal domain superfamily NIY05_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_00005 IPR010921 Trp repressor/replication initiator NIY05_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal NIY05_00010 IPR022637 DNA polymerase III, beta sliding clamp, central NIY05_00010 IPR001001 DNA polymerase III, beta sliding clamp NIY05_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal NIY05_00015 IPR001238 DNA-binding, RecF NIY05_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_00015 IPR003395 RecF/RecN/SMC, N-terminal NIY05_00015 IPR042174 DNA-binding RecF, domain 2 NIY05_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily NIY05_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain NIY05_00020 IPR006171 TOPRIM domain NIY05_00020 IPR018522 DNA topoisomerase, type IIA, conserved site NIY05_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 NIY05_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal NIY05_00020 IPR001241 DNA topoisomerase, type IIA NIY05_00020 IPR011557 DNA gyrase, subunit B NIY05_00020 IPR020568 Ribosomal protein S5 domain 2-type fold NIY05_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_00020 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_00020 IPR041423 DNA gyrase subunit B insert domain NIY05_00020 IPR002288 DNA gyrase B subunit, C-terminal NIY05_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIY05_00030 IPR032818 DedA family NIY05_00030 IPR032816 SNARE associated Golgi protein NIY05_00035 IPR003439 ABC transporter-like NIY05_00035 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_00035 IPR003593 AAA+ ATPase domain NIY05_00035 IPR032781 ABC-transporter extension domain NIY05_00035 IPR017871 ABC transporter, conserved site NIY05_00040 IPR038404 TRAP transporter solute receptor DctP superfamily NIY05_00045 IPR038404 TRAP transporter solute receptor DctP superfamily NIY05_00050 IPR038404 TRAP transporter solute receptor DctP superfamily NIY05_00055 IPR000361 FeS cluster biogenesis NIY05_00055 IPR016092 FeS cluster insertion protein NIY05_00055 IPR017870 FeS cluster insertion, C-terminal, conserved site NIY05_00055 IPR023063 FeS cluster insertion protein ErpA NIY05_00055 IPR035903 HesB-like domain superfamily NIY05_00060 IPR029058 Alpha/Beta hydrolase fold NIY05_00060 IPR000073 Alpha/beta hydrolase fold-1 NIY05_00060 IPR000639 Epoxide hydrolase-like NIY05_00065 IPR005338 Anhydro-N-acetylmuramic acid kinase NIY05_00070 IPR002942 RNA-binding S4 domain NIY05_00070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_00070 IPR002305 Aminoacyl-tRNA synthetase, class Ic NIY05_00070 IPR024088 Tyrosine-tRNA ligase, bacterial-type NIY05_00070 IPR036986 RNA-binding S4 domain superfamily NIY05_00070 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 NIY05_00070 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NIY05_00070 IPR002307 Tyrosine-tRNA ligase NIY05_00110 IPR037272 Sodium:neurotransmitter symporter superfamily NIY05_00110 IPR000175 Sodium:neurotransmitter symporter NIY05_00120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_00120 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site NIY05_00120 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type NIY05_00120 IPR035926 NusB-like superfamily NIY05_00120 IPR006027 NusB/RsmB/TIM44 NIY05_00120 IPR023267 RNA (C5-cytosine) methyltransferase NIY05_00120 IPR004573 rRNA small subunit methyltransferase B NIY05_00125 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain NIY05_00125 IPR011034 Formyl transferase-like, C-terminal domain superfamily NIY05_00125 IPR036477 Formyl transferase, N-terminal domain superfamily NIY05_00125 IPR005794 Methionyl-tRNA formyltransferase NIY05_00125 IPR005793 Formyl transferase, C-terminal NIY05_00125 IPR037022 Formyl transferase, C-terminal domain superfamily NIY05_00125 IPR002376 Formyl transferase, N-terminal NIY05_00130 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site NIY05_00130 IPR037237 IlvD/EDD, N-terminal domain NIY05_00130 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase NIY05_00130 IPR042096 Dihydroxy-acid dehydratase, C-terminal NIY05_00130 IPR004404 Dihydroxy-acid dehydratase NIY05_00145 IPR000847 Transcription regulator HTH, LysR NIY05_00145 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_00145 IPR005119 LysR, substrate-binding NIY05_00145 IPR036390 Winged helix DNA-binding domain superfamily NIY05_00150 IPR019918 Pyrimidine permease RutG, predicted NIY05_00150 IPR006043 Xanthine/uracil/vitamin C permease NIY05_00150 IPR006042 Xanthine/uracil permease NIY05_00155 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site NIY05_00155 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily NIY05_00155 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type NIY05_00155 IPR033129 Phosphoenolpyruvate carboxylase, His active site NIY05_00155 IPR021135 Phosphoenolpyruvate carboxylase NIY05_00160 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NIY05_00160 IPR009057 Homeobox-like domain superfamily NIY05_00160 IPR001647 DNA-binding HTH domain, TetR-type NIY05_00160 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NIY05_00160 IPR013572 Transcription regulator MAATS, C-terminal NIY05_00165 IPR006143 RND efflux pump, membrane fusion protein NIY05_00165 IPR030190 Macrolide export protein MacA NIY05_00165 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIY05_00170 IPR001036 Acriflavin resistance protein NIY05_00170 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIY05_00180 IPR018253 DnaJ domain, conserved site NIY05_00180 IPR001623 DnaJ domain NIY05_00180 IPR002939 Chaperone DnaJ, C-terminal NIY05_00180 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily NIY05_00180 IPR036869 Chaperone J-domain superfamily NIY05_00180 IPR012724 Chaperone DnaJ NIY05_00180 IPR001305 Heat shock protein DnaJ, cysteine-rich domain NIY05_00180 IPR008971 HSP40/DnaJ peptide-binding NIY05_00190 IPR022664 Dihydrodipicolinate reductase, conserved site NIY05_00190 IPR036291 NAD(P)-binding domain superfamily NIY05_00190 IPR023940 Dihydrodipicolinate reductase NIY05_00190 IPR022663 Dihydrodipicolinate reductase, C-terminal NIY05_00190 IPR000846 Dihydrodipicolinate reductase, N-terminal NIY05_00200 IPR020846 Major facilitator superfamily domain NIY05_00200 IPR036259 MFS transporter superfamily NIY05_00200 IPR011701 Major facilitator superfamily NIY05_00205 IPR018170 Aldo/keto reductase, conserved site NIY05_00205 IPR020471 Aldo/keto reductase NIY05_00205 IPR023210 NADP-dependent oxidoreductase domain NIY05_00205 IPR036812 NADP-dependent oxidoreductase domain superfamily NIY05_00210 IPR005119 LysR, substrate-binding NIY05_00210 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_00210 IPR036390 Winged helix DNA-binding domain superfamily NIY05_00210 IPR000847 Transcription regulator HTH, LysR NIY05_00225 IPR036390 Winged helix DNA-binding domain superfamily NIY05_00225 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_00225 IPR000524 Transcription regulator HTH, GntR NIY05_00225 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_00225 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_00225 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_00225 IPR004839 Aminotransferase, class I/classII NIY05_00230 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 NIY05_00230 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site NIY05_00230 IPR013154 Alcohol dehydrogenase, N-terminal NIY05_00230 IPR013149 Alcohol dehydrogenase, C-terminal NIY05_00230 IPR036291 NAD(P)-binding domain superfamily NIY05_00230 IPR020843 Polyketide synthase, enoylreductase domain NIY05_00230 IPR011032 GroES-like superfamily NIY05_00235 IPR004597 DNA-3-methyladenine glycosylase I NIY05_00235 IPR011257 DNA glycosylase NIY05_00235 IPR005019 Methyladenine glycosylase NIY05_00250 IPR011257 DNA glycosylase NIY05_00250 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal NIY05_00250 IPR004036 Endonuclease III-like, conserved site-2 NIY05_00250 IPR000445 Helix-hairpin-helix motif NIY05_00250 IPR005760 A/G-specific adenine glycosylase MutY NIY05_00250 IPR029119 MutY, C-terminal NIY05_00250 IPR015797 NUDIX hydrolase-like domain superfamily NIY05_00250 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif NIY05_00250 IPR004035 Endonuclease III, iron-sulphur binding site NIY05_00250 IPR003265 HhH-GPD domain NIY05_00265 IPR009760 Protein of unknown function DUF1328 NIY05_00270 IPR008228 Uncharacterised conserved protein UCP006173 NIY05_00270 IPR005358 Putative zinc- or iron-chelating domain containing protein NIY05_00275 IPR011042 Six-bladed beta-propeller, TolB-like NIY05_00275 IPR012938 Glucose/Sorbosone dehydrogenase NIY05_00275 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase NIY05_00280 IPR003959 ATPase, AAA-type, core NIY05_00280 IPR003593 AAA+ ATPase domain NIY05_00280 IPR032423 AAA C-terminal domain NIY05_00280 IPR021886 MgsA AAA+ ATPase C-terminal NIY05_00280 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal NIY05_00280 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_00285 IPR023271 Aquaporin-like NIY05_00285 IPR000292 Formate/nitrite transporter NIY05_00295 IPR028923 SAICAR synthetase/ADE2, N-terminal NIY05_00295 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase NIY05_00295 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase NIY05_00295 IPR018236 SAICAR synthetase, conserved site NIY05_00305 IPR013785 Aldolase-type TIM barrel NIY05_00305 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA NIY05_00305 IPR002220 DapA-like NIY05_00305 IPR020625 Schiff base-forming aldolase, active site NIY05_00305 IPR020624 Schiff base-forming aldolase, conserved site NIY05_00310 IPR036380 Isochorismatase-like superfamily NIY05_00310 IPR000868 Isochorismatase-like NIY05_00315 IPR004710 Bile acid:sodium symporter NIY05_00315 IPR038770 Sodium/solute symporter superfamily NIY05_00315 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 NIY05_00320 IPR002528 Multi antimicrobial extrusion protein NIY05_00325 IPR007553 Domain of unknown function DUF523 NIY05_00330 IPR005956 4-hydroxyphenylpyruvate dioxygenase NIY05_00330 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal NIY05_00330 IPR037523 Vicinal oxygen chelate (VOC) domain NIY05_00330 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIY05_00330 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal NIY05_00330 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIY05_00340 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIY05_00340 IPR022858 Metallothiol transferase FosB NIY05_00340 IPR037523 Vicinal oxygen chelate (VOC) domain NIY05_00340 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIY05_00345 IPR036282 Glutathione S-transferase, C-terminal domain superfamily NIY05_00345 IPR040079 Glutathione Transferase family NIY05_00345 IPR004045 Glutathione S-transferase, N-terminal NIY05_00345 IPR004046 Glutathione S-transferase, C-terminal NIY05_00345 IPR005955 Glutathione S-transferases, class Zeta NIY05_00345 IPR034330 Glutathione S-transferases, class Zeta , C-terminal NIY05_00345 IPR034333 Glutathione S-transferases, class Zeta , N-terminal NIY05_00345 IPR036249 Thioredoxin-like superfamily NIY05_00345 IPR010987 Glutathione S-transferase, C-terminal-like NIY05_00355 IPR004840 Amino acid permease, conserved site NIY05_00355 IPR004841 Amino acid permease/ SLC12A domain NIY05_00365 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NIY05_00365 IPR003495 CobW/HypB/UreG, nucleotide-binding domain NIY05_00365 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_00375 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily NIY05_00375 IPR010248 Histidine utilization repressor NIY05_00375 IPR000524 Transcription regulator HTH, GntR NIY05_00375 IPR011663 UbiC transcription regulator-associated NIY05_00375 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_00375 IPR036390 Winged helix DNA-binding domain superfamily NIY05_00380 IPR011051 RmlC-like cupin domain superfamily NIY05_00380 IPR014710 RmlC-like jelly roll fold NIY05_00380 IPR010282 Uncharacterised protein family HutD/Ves NIY05_00385 IPR023636 Urocanase conserved site NIY05_00385 IPR023637 Urocanase NIY05_00385 IPR035401 Urocanase, C-terminal domain NIY05_00385 IPR038364 Urocanase, central domain superfamily NIY05_00385 IPR036190 Urocanase superfamily NIY05_00385 IPR035400 Urocanase, N-terminal domain NIY05_00385 IPR035085 Urocanase, Rossmann-like domain NIY05_00390 IPR001106 Aromatic amino acid lyase NIY05_00390 IPR022313 Phenylalanine/histidine ammonia-lyases, active site NIY05_00390 IPR008948 L-Aspartase-like NIY05_00390 IPR005921 Histidine ammonia-lyase NIY05_00390 IPR024083 Fumarase/histidase, N-terminal NIY05_00395 IPR004840 Amino acid permease, conserved site NIY05_00395 IPR004841 Amino acid permease/ SLC12A domain NIY05_00400 IPR005920 Imidazolonepropionase NIY05_00400 IPR011059 Metal-dependent hydrolase, composite domain superfamily NIY05_00400 IPR032466 Metal-dependent hydrolase NIY05_00400 IPR006680 Amidohydrolase-related NIY05_00405 IPR020855 Ureohydrolase, manganese-binding site NIY05_00405 IPR006035 Ureohydrolase NIY05_00405 IPR005923 Formiminoglutamase NIY05_00405 IPR023696 Ureohydrolase domain superfamily NIY05_00420 IPR015942 Asp/Glu/hydantoin racemase NIY05_00420 IPR001920 Asp/Glu racemase NIY05_00420 IPR018187 Asp/Glu racemase, active site 1 NIY05_00420 IPR033134 Asp/Glu racemase, active site 2 NIY05_00420 IPR004391 Glutamate racemase NIY05_00425 IPR017932 Glutamine amidotransferase type 2 domain NIY05_00425 IPR035466 GlmS/AgaS, SIS domain 1 NIY05_00425 IPR001347 Sugar isomerase (SIS) NIY05_00425 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising NIY05_00425 IPR035490 GlmS/FrlB, SIS domain 2 NIY05_00425 IPR029055 Nucleophile aminohydrolases, N-terminal NIY05_00430 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase NIY05_00430 IPR038009 GlmU, C-terminal LbH domain NIY05_00430 IPR001451 Hexapeptide repeat NIY05_00430 IPR018357 Hexapeptide transferase, conserved site NIY05_00430 IPR025877 MobA-like NTP transferase NIY05_00430 IPR029044 Nucleotide-diphospho-sugar transferases NIY05_00430 IPR011004 Trimeric LpxA-like superfamily NIY05_00435 IPR007686 YutG/PgpA domain NIY05_00435 IPR036681 PgpA-like superfamily NIY05_00435 IPR026037 Phosphatidylglycerophosphatase A NIY05_00440 IPR010918 PurM-like, C-terminal domain NIY05_00440 IPR006283 Thiamine-monophosphate kinase NIY05_00440 IPR016188 PurM-like, N-terminal domain NIY05_00440 IPR036676 PurM-like, C-terminal domain superfamily NIY05_00440 IPR036921 PurM-like, N-terminal domain superfamily NIY05_00445 IPR035926 NusB-like superfamily NIY05_00445 IPR011605 NusB antitermination factor NIY05_00445 IPR006027 NusB/RsmB/TIM44 NIY05_00450 IPR034964 Lumazine synthase NIY05_00450 IPR036467 Lumazine/riboflavin synthase superfamily NIY05_00450 IPR002180 Lumazine/riboflavin synthase NIY05_00455 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily NIY05_00455 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB NIY05_00455 IPR032677 GTP cyclohydrolase II NIY05_00455 IPR036144 RibA-like superfamily NIY05_00465 IPR002912 ACT domain NIY05_00465 IPR023214 HAD superfamily NIY05_00465 IPR023190 Phosphoserine phosphatase, domain 2 NIY05_00465 IPR036412 HAD-like superfamily NIY05_00480 IPR003732 D-aminoacyl-tRNA deacylase DTD NIY05_00480 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily NIY05_00485 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase NIY05_00485 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain NIY05_00485 IPR006406 Nicotinate phosphoribosyltransferase NIY05_00485 IPR007229 Nicotinate phosphoribosyltransferase family NIY05_00485 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal NIY05_00490 IPR036873 Rhodanese-like domain superfamily NIY05_00490 IPR001307 Thiosulphate sulfurtransferase, conserved site NIY05_00490 IPR001763 Rhodanese-like domain NIY05_00495 IPR033177 Phosphatidylserine decarboxylase NIY05_00495 IPR003817 Phosphatidylserine decarboxylase-related NIY05_00495 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 NIY05_00500 IPR004304 Acetamidase/Formamidase NIY05_00520 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR NIY05_00520 IPR021766 Phosphate regulon sensor protein PhoR NIY05_00520 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_00520 IPR013767 PAS fold NIY05_00520 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NIY05_00520 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NIY05_00520 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NIY05_00520 IPR000014 PAS domain NIY05_00520 IPR035965 PAS domain superfamily NIY05_00520 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_00520 IPR005467 Histidine kinase domain NIY05_00525 IPR001867 OmpR/PhoB-type DNA-binding domain NIY05_00525 IPR016032 Signal transduction response regulator, C-terminal effector NIY05_00525 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB NIY05_00525 IPR001789 Signal transduction response regulator, receiver domain NIY05_00525 IPR039420 Transcriptional regulatory protein WalR-like NIY05_00525 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_00525 IPR011006 CheY-like superfamily NIY05_00535 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_00535 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_00535 IPR036291 NAD(P)-binding domain superfamily NIY05_00540 IPR002528 Multi antimicrobial extrusion protein NIY05_00545 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_00545 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_00545 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_00545 IPR004839 Aminotransferase, class I/classII NIY05_00550 IPR007383 Protein of unknown function DUF445 NIY05_00565 IPR007370 Glutamate--cysteine ligase NIY05_00565 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain NIY05_00565 IPR006334 Glutamate--cysteine ligase, monofunctional NIY05_00570 IPR003752 Disulphide bond formation protein DsbB/BdbC NIY05_00570 IPR022920 Disulphide bond formation protein DsbB NIY05_00570 IPR023380 DsbB-like superfamily NIY05_00575 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal NIY05_00575 IPR006531 Gp5 N-terminal NIY05_00575 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain NIY05_00575 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset NIY05_00575 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein NIY05_00575 IPR037026 Vgr protein, OB-fold domain superfamily NIY05_00580 IPR018392 LysM domain NIY05_00580 IPR036779 LysM domain superfamily NIY05_00580 IPR000064 Endopeptidase, NLPC/P60 domain NIY05_00580 IPR038765 Papain-like cysteine peptidase superfamily NIY05_00595 IPR029058 Alpha/Beta hydrolase fold NIY05_00595 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA NIY05_00600 IPR001241 DNA topoisomerase, type IIA NIY05_00600 IPR002288 DNA gyrase B subunit, C-terminal NIY05_00600 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIY05_00600 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_00600 IPR006171 TOPRIM domain NIY05_00600 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_00600 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative NIY05_00600 IPR020568 Ribosomal protein S5 domain 2-type fold NIY05_00600 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 NIY05_00600 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal NIY05_00600 IPR013760 DNA topoisomerase, type IIA-like domain superfamily NIY05_00600 IPR018522 DNA topoisomerase, type IIA, conserved site NIY05_00605 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_00605 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_00605 IPR036291 NAD(P)-binding domain superfamily NIY05_00610 IPR011051 RmlC-like cupin domain superfamily NIY05_00610 IPR007247 Ureidoglycolate lyase NIY05_00610 IPR024060 Ureidoglycolate lyase domain superfamily NIY05_00610 IPR023525 Ureidoglycolate lyase, bacterial NIY05_00615 IPR015908 Allantoicase domain NIY05_00615 IPR005164 Allantoicase NIY05_00615 IPR008979 Galactose-binding-like domain superfamily NIY05_00620 IPR002938 FAD-binding domain NIY05_00620 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_00630 IPR017588 Uric acid permease UacT-like NIY05_00630 IPR006042 Xanthine/uracil permease NIY05_00630 IPR006043 Xanthine/uracil/vitamin C permease NIY05_00635 IPR014306 Hydroxyisourate hydrolase NIY05_00635 IPR023416 Transthyretin/hydroxyisourate hydrolase domain NIY05_00635 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily NIY05_00635 IPR023419 Transthyretin, conserved site NIY05_00635 IPR023418 Transthyretin, thyroxine binding site NIY05_00665 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain NIY05_00665 IPR003834 Cytochrome C biogenesis protein, transmembrane domain NIY05_00665 IPR035671 DsbD gamma NIY05_00665 IPR022910 Thiol:disulphide interchange protein DsbD NIY05_00665 IPR036249 Thioredoxin-like superfamily NIY05_00665 IPR017937 Thioredoxin, conserved site NIY05_00665 IPR013766 Thioredoxin domain NIY05_00665 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily NIY05_00670 IPR000160 GGDEF domain NIY05_00670 IPR029787 Nucleotide cyclase NIY05_00670 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region NIY05_00675 IPR029058 Alpha/Beta hydrolase fold NIY05_00675 IPR013094 Alpha/beta hydrolase fold-3 NIY05_00675 IPR002168 Lipase, GDXG, putative histidine active site NIY05_00675 IPR033140 Lipase, GDXG, putative serine active site NIY05_00685 IPR006504 Transcriptional regulator Spx/MgsR NIY05_00685 IPR006660 Arsenate reductase-like NIY05_00685 IPR036249 Thioredoxin-like superfamily NIY05_00690 IPR020847 AP endonuclease 1, binding site NIY05_00690 IPR020848 AP endonuclease 1, conserved site NIY05_00690 IPR004808 AP endonuclease 1 NIY05_00690 IPR005135 Endonuclease/exonuclease/phosphatase NIY05_00690 IPR036691 Endonuclease/exonuclease/phosphatase superfamily NIY05_00695 IPR023031 Orotate phosphoribosyltransferase NIY05_00695 IPR004467 Orotate phosphoribosyl transferase domain NIY05_00695 IPR000836 Phosphoribosyltransferase domain NIY05_00695 IPR029057 Phosphoribosyltransferase-like NIY05_00700 IPR010105 TonB-dependent siderophore receptor NIY05_00700 IPR039423 TonB-dependent receptor-like NIY05_00700 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NIY05_00700 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_00700 IPR012910 TonB-dependent receptor, plug domain NIY05_00700 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_00710 IPR011761 ATP-grasp fold NIY05_00710 IPR013815 ATP-grasp fold, subdomain 1 NIY05_00710 IPR006284 Glutathione synthetase, prokaryotic NIY05_00710 IPR004218 Prokaryotic glutathione synthetase, ATP-binding NIY05_00710 IPR004215 Prokaryotic glutathione synthetase, N-terminal NIY05_00710 IPR016185 Pre-ATP-grasp domain superfamily NIY05_00715 IPR006009 N-acetylglucosaminyltransferase, MurG NIY05_00715 IPR007235 Glycosyl transferase, family 28, C-terminal NIY05_00715 IPR004276 Glycosyltransferase family 28, N-terminal domain NIY05_00720 IPR036565 Mur-like, catalytic domain superfamily NIY05_00720 IPR000713 Mur ligase, N-terminal catalytic domain NIY05_00720 IPR036615 Mur ligase, C-terminal domain superfamily NIY05_00720 IPR013221 Mur ligase, central NIY05_00720 IPR005758 UDP-N-acetylmuramate--L-alanine ligase NIY05_00720 IPR004101 Mur ligase, C-terminal NIY05_00725 IPR013815 ATP-grasp fold, subdomain 1 NIY05_00725 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site NIY05_00725 IPR005905 D-alanine--D-alanine ligase NIY05_00725 IPR011095 D-alanine--D-alanine ligase, C-terminal NIY05_00725 IPR011127 D-alanine--D-alanine ligase, N-terminal domain NIY05_00725 IPR016185 Pre-ATP-grasp domain superfamily NIY05_00725 IPR011761 ATP-grasp fold NIY05_00730 IPR005548 Cell division protein FtsQ/DivIB NIY05_00730 IPR034746 POTRA domain NIY05_00730 IPR013685 POTRA domain, FtsQ-type NIY05_00730 IPR026579 Cell division protein FtsQ NIY05_00735 IPR020823 Cell division protein FtsA NIY05_00735 IPR003494 SHS2 domain inserted in FtsA NIY05_00740 IPR000158 Cell division protein FtsZ NIY05_00740 IPR020805 Cell division protein FtsZ, conserved site NIY05_00740 IPR024757 Cell division protein FtsZ, C-terminal NIY05_00740 IPR008280 Tubulin/FtsZ, C-terminal NIY05_00740 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain NIY05_00740 IPR036525 Tubulin/FtsZ, GTPase domain superfamily NIY05_00740 IPR003008 Tubulin/FtsZ, GTPase domain NIY05_00745 IPR020568 Ribosomal protein S5 domain 2-type fold NIY05_00745 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase NIY05_00745 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal NIY05_00745 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal NIY05_00755 IPR011055 Duplicated hybrid motif NIY05_00755 IPR016047 Peptidase M23 NIY05_00760 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal NIY05_00760 IPR004660 Pyruvate dehydrogenase E1 component NIY05_00760 IPR041621 Pyruvate dehydrogenase E1 component, middle domain NIY05_00760 IPR005474 Transketolase, N-terminal NIY05_00760 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II NIY05_00760 IPR029061 Thiamin diphosphate-binding fold NIY05_00765 IPR004167 Peripheral subunit-binding domain NIY05_00765 IPR011053 Single hybrid motif NIY05_00765 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NIY05_00765 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain NIY05_00765 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex NIY05_00765 IPR000089 Biotin/lipoyl attachment NIY05_00765 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily NIY05_00765 IPR036625 E3-binding domain superfamily NIY05_00775 IPR001727 Gdt1 family NIY05_00780 IPR010105 TonB-dependent siderophore receptor NIY05_00780 IPR010917 TonB-dependent receptor, conserved site NIY05_00780 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NIY05_00780 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_00780 IPR039423 TonB-dependent receptor-like NIY05_00780 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_00780 IPR010916 TonB box, conserved site NIY05_00780 IPR012910 TonB-dependent receptor, plug domain NIY05_00785 IPR002563 Flavin reductase like domain NIY05_00785 IPR008254 Flavodoxin/nitric oxide synthase NIY05_00785 IPR001226 Flavodoxin, conserved site NIY05_00785 IPR029039 Flavoprotein-like superfamily NIY05_00785 IPR001279 Metallo-beta-lactamase NIY05_00785 IPR012349 FMN-binding split barrel NIY05_00785 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NIY05_00790 IPR005358 Putative zinc- or iron-chelating domain containing protein NIY05_00795 IPR015875 IMP dehydrogenase / GMP reductase, conserved site NIY05_00795 IPR001093 IMP dehydrogenase/GMP reductase NIY05_00795 IPR013785 Aldolase-type TIM barrel NIY05_00795 IPR005990 Inosine-5'-monophosphate dehydrogenase NIY05_00795 IPR000644 CBS domain NIY05_00800 IPR016066 Alpha-D-phosphohexomutase, conserved site NIY05_00800 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I NIY05_00800 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III NIY05_00800 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II NIY05_00800 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III NIY05_00800 IPR005843 Alpha-D-phosphohexomutase, C-terminal NIY05_00800 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily NIY05_00800 IPR006352 Phosphoglucosamine mutase, bacterial type NIY05_00800 IPR005841 Alpha-D-phosphohexomutase superfamily NIY05_00805 IPR000659 Pyridoxamine 5'-phosphate oxidase NIY05_00805 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site NIY05_00805 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative NIY05_00805 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal NIY05_00805 IPR012349 FMN-binding split barrel NIY05_00810 IPR041122 RecJ, OB domain NIY05_00810 IPR003156 DHHA1 domain NIY05_00810 IPR001667 DDH domain NIY05_00810 IPR004610 Bacterial RecJ exonuclease NIY05_00810 IPR038763 DHH phosphoesterase superfamily NIY05_00830 IPR013785 Aldolase-type TIM barrel NIY05_00830 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal NIY05_00835 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily NIY05_00835 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal NIY05_00835 IPR039901 3-deoxy-D-manno-octulosonic acid transferase NIY05_00840 IPR029028 Alpha/beta knot methyltransferases NIY05_00840 IPR006700 Ribosomal RNA small subunit methyltransferase E NIY05_00840 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NIY05_00845 IPR010920 LSM domain superfamily NIY05_00845 IPR006685 Mechanosensitive ion channel MscS NIY05_00845 IPR011066 Mechanosensitive ion channel MscS, C-terminal NIY05_00845 IPR006686 Mechanosensitive ion channel MscS, conserved site NIY05_00845 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 NIY05_00845 IPR023408 Mechanosensitive ion channel MscS domain superfamily NIY05_00855 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain NIY05_00855 IPR011904 Acetate-CoA ligase NIY05_00855 IPR042099 AMP-dependent synthetase-like superfamily NIY05_00855 IPR025110 AMP-binding enzyme, C-terminal domain NIY05_00855 IPR020845 AMP-binding, conserved site NIY05_00855 IPR000873 AMP-dependent synthetase/ligase NIY05_00860 IPR036380 Isochorismatase-like superfamily NIY05_00860 IPR000868 Isochorismatase-like NIY05_00865 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_00865 IPR019888 Transcription regulator AsnC-type NIY05_00865 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIY05_00865 IPR011008 Dimeric alpha-beta barrel NIY05_00865 IPR036390 Winged helix DNA-binding domain superfamily NIY05_00865 IPR000485 AsnC-type HTH domain NIY05_00870 IPR001207 Transposase, mutator type NIY05_00875 IPR011251 Luciferase-like domain NIY05_00875 IPR036661 Luciferase-like domain superfamily NIY05_00875 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG NIY05_00880 IPR029039 Flavoprotein-like superfamily NIY05_00880 IPR005025 NADPH-dependent FMN reductase-like NIY05_00880 IPR019912 FMN reductase, MsuE-like NIY05_00890 IPR001789 Signal transduction response regulator, receiver domain NIY05_00890 IPR011006 CheY-like superfamily NIY05_00890 IPR000792 Transcription regulator LuxR, C-terminal NIY05_00890 IPR016032 Signal transduction response regulator, C-terminal effector NIY05_00900 IPR001789 Signal transduction response regulator, receiver domain NIY05_00900 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain NIY05_00900 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NIY05_00900 IPR037952 Sensor histidine kinase TorS, sensor domain NIY05_00900 IPR036641 HPT domain superfamily NIY05_00900 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NIY05_00900 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NIY05_00900 IPR005467 Histidine kinase domain NIY05_00900 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_00900 IPR003660 HAMP domain NIY05_00900 IPR011006 CheY-like superfamily NIY05_00900 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_00900 IPR038188 TorS, sensor domain superfamily NIY05_00905 IPR007436 Protein of unknown function DUF485 NIY05_00910 IPR014083 Cation/acetate symporter ActP NIY05_00910 IPR038377 Sodium/glucose symporter superfamily NIY05_00910 IPR001734 Sodium/solute symporter NIY05_00910 IPR018212 Sodium/solute symporter, conserved site NIY05_00920 IPR018093 BCCT transporter, conserved site NIY05_00920 IPR000060 BCCT transporter family NIY05_00930 IPR029787 Nucleotide cyclase NIY05_00930 IPR000160 GGDEF domain NIY05_00940 IPR041102 UvrA, interaction domain NIY05_00940 IPR003439 ABC transporter-like NIY05_00940 IPR017871 ABC transporter, conserved site NIY05_00940 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_00940 IPR004602 UvrABC system subunit A NIY05_00940 IPR041552 UvrA DNA-binding domain NIY05_00945 IPR009057 Homeobox-like domain superfamily NIY05_00945 IPR001647 DNA-binding HTH domain, TetR-type NIY05_00945 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NIY05_00945 IPR011075 Tetracyclin repressor-like, C-terminal domain NIY05_00950 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site NIY05_00950 IPR020843 Polyketide synthase, enoylreductase domain NIY05_00950 IPR036291 NAD(P)-binding domain superfamily NIY05_00950 IPR013149 Alcohol dehydrogenase, C-terminal NIY05_00950 IPR011032 GroES-like superfamily NIY05_00950 IPR013154 Alcohol dehydrogenase, N-terminal NIY05_00960 IPR009707 Membrane protein GlpM/YdgC NIY05_00965 IPR022998 Thiamine phosphate synthase/TenI NIY05_00965 IPR029056 Ribokinase-like NIY05_00965 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase NIY05_00965 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase NIY05_00965 IPR034291 Thiamine phosphate synthase NIY05_00965 IPR016084 Haem oxygenase-like, multi-helical NIY05_00965 IPR013785 Aldolase-type TIM barrel NIY05_00965 IPR036206 Thiamin phosphate synthase superfamily NIY05_00965 IPR004305 Thiaminase-2/PQQC NIY05_00975 IPR036259 MFS transporter superfamily NIY05_00975 IPR020846 Major facilitator superfamily domain NIY05_00975 IPR011701 Major facilitator superfamily NIY05_00980 IPR011344 Single-stranded DNA-binding protein NIY05_00980 IPR000424 Primosome PriB/single-strand DNA-binding NIY05_00980 IPR012340 Nucleic acid-binding, OB-fold NIY05_00990 IPR011606 Branched-chain amino acid transport, permease NIY05_00990 IPR004471 Branched-chain amino acid transport, AzlC NIY05_01000 IPR011265 GABA permease NIY05_01000 IPR004840 Amino acid permease, conserved site NIY05_01000 IPR004841 Amino acid permease/ SLC12A domain NIY05_01005 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_01005 IPR036390 Winged helix DNA-binding domain superfamily NIY05_01005 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_01005 IPR000524 Transcription regulator HTH, GntR NIY05_01005 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_01005 IPR004839 Aminotransferase, class I/classII NIY05_01010 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_01010 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_01010 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_01010 IPR005814 Aminotransferase class-III NIY05_01010 IPR004632 4-aminobutyrate aminotransferase, bacterial NIY05_01015 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_01015 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NIY05_01015 IPR016160 Aldehyde dehydrogenase, cysteine active site NIY05_01015 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_01015 IPR015590 Aldehyde dehydrogenase domain NIY05_01015 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_01015 IPR010102 Succinate semialdehyde dehydrogenase NIY05_01020 IPR036390 Winged helix DNA-binding domain superfamily NIY05_01020 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_01020 IPR000847 Transcription regulator HTH, LysR NIY05_01025 IPR036380 Isochorismatase-like superfamily NIY05_01025 IPR000868 Isochorismatase-like NIY05_01030 IPR012093 Pirin NIY05_01030 IPR008778 Pirin, C-terminal domain NIY05_01030 IPR011051 RmlC-like cupin domain superfamily NIY05_01030 IPR003829 Pirin, N-terminal domain NIY05_01030 IPR014710 RmlC-like jelly roll fold NIY05_01035 IPR002937 Amine oxidase NIY05_01035 IPR014105 Carotenoid/retinoid oxidoreductase NIY05_01035 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_01055 IPR011701 Major facilitator superfamily NIY05_01055 IPR020846 Major facilitator superfamily domain NIY05_01055 IPR036259 MFS transporter superfamily NIY05_01055 IPR005829 Sugar transporter, conserved site NIY05_01060 IPR000847 Transcription regulator HTH, LysR NIY05_01060 IPR005119 LysR, substrate-binding NIY05_01060 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_01060 IPR036390 Winged helix DNA-binding domain superfamily NIY05_01080 IPR036812 NADP-dependent oxidoreductase domain superfamily NIY05_01080 IPR023210 NADP-dependent oxidoreductase domain NIY05_01080 IPR018170 Aldo/keto reductase, conserved site NIY05_01080 IPR020471 Aldo/keto reductase NIY05_01085 IPR020449 Transcription regulator HTH, AraC- type NIY05_01085 IPR018062 HTH domain AraC-type, conserved site NIY05_01085 IPR014710 RmlC-like jelly roll fold NIY05_01085 IPR018060 DNA binding HTH domain, AraC-type NIY05_01085 IPR023699 Transcription activator HTH, RhaR NIY05_01085 IPR009057 Homeobox-like domain superfamily NIY05_01085 IPR003313 AraC-type arabinose-binding/dimerisation domain NIY05_01085 IPR037923 Transcription regulator HTH-like NIY05_01115 IPR002577 Helix-turn-helix, HxlR type NIY05_01115 IPR011991 ArsR-like helix-turn-helix domain NIY05_01115 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_01115 IPR036390 Winged helix DNA-binding domain superfamily NIY05_01120 IPR029039 Flavoprotein-like superfamily NIY05_01120 IPR003680 Flavodoxin-like fold NIY05_01140 IPR003855 Potassium transporter NIY05_01140 IPR023051 Potassium uptake protein, low affinity, Kup NIY05_01165 IPR023271 Aquaporin-like NIY05_01165 IPR034294 Aquaporin transporter NIY05_01165 IPR023743 Aquaporin Z NIY05_01165 IPR000425 Major intrinsic protein NIY05_01165 IPR022357 Major intrinsic protein, conserved site NIY05_01180 IPR013785 Aldolase-type TIM barrel NIY05_01180 IPR006062 Histidine biosynthesis NIY05_01180 IPR004651 Histidine biosynthesis, HisF NIY05_01180 IPR011060 Ribulose-phosphate binding barrel NIY05_01185 IPR002575 Aminoglycoside phosphotransferase NIY05_01185 IPR005280 Homoserine kinase, type II NIY05_01185 IPR011009 Protein kinase-like domain superfamily NIY05_01200 IPR011008 Dimeric alpha-beta barrel NIY05_01200 IPR007138 Antibiotic biosynthesis monooxygenase domain NIY05_01215 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase NIY05_01215 IPR011060 Ribulose-phosphate binding barrel NIY05_01215 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA NIY05_01215 IPR013785 Aldolase-type TIM barrel NIY05_01215 IPR006062 Histidine biosynthesis NIY05_01230 IPR029062 Class I glutamine amidotransferase-like NIY05_01230 IPR017926 Glutamine amidotransferase NIY05_01230 IPR010139 Imidazole glycerol phosphate synthase, subunit H NIY05_01235 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site NIY05_01235 IPR000807 Imidazoleglycerol-phosphate dehydratase NIY05_01235 IPR020568 Ribosomal protein S5 domain 2-type fold NIY05_01235 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily NIY05_01255 IPR017255 Acetyltransferase, GNAT, predicted NIY05_01255 IPR023072 Acetyltransferase, YpeA NIY05_01255 IPR016181 Acyl-CoA N-acyltransferase NIY05_01255 IPR000182 GNAT domain NIY05_01260 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain NIY05_01260 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily NIY05_01260 IPR003702 Acetyl-CoA hydrolase/transferase NIY05_01260 IPR037171 NagB/RpiA transferase-like NIY05_01260 IPR017821 Succinate CoA transferase NIY05_01270 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_01270 IPR005467 Histidine kinase domain NIY05_01270 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NIY05_01270 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NIY05_01270 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NIY05_01270 IPR003660 HAMP domain NIY05_01270 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_01275 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_01275 IPR039420 Transcriptional regulatory protein WalR-like NIY05_01275 IPR011006 CheY-like superfamily NIY05_01275 IPR016032 Signal transduction response regulator, C-terminal effector NIY05_01275 IPR001867 OmpR/PhoB-type DNA-binding domain NIY05_01275 IPR001789 Signal transduction response regulator, receiver domain NIY05_01280 IPR037027 YqgF/RNase H-like domain superfamily NIY05_01280 IPR006641 YqgF/RNase H-like domain NIY05_01280 IPR018974 Tex-like protein, N-terminal NIY05_01280 IPR023319 Tex-like protein, HTH domain superfamily NIY05_01280 IPR023323 Tex-like domain superfamily NIY05_01280 IPR003029 S1 domain NIY05_01280 IPR022967 RNA-binding domain, S1 NIY05_01280 IPR032639 Tex protein, YqgF-like domain NIY05_01280 IPR041692 HHH domain 9 NIY05_01280 IPR012340 Nucleic acid-binding, OB-fold NIY05_01280 IPR012337 Ribonuclease H-like superfamily NIY05_01280 IPR010994 RuvA domain 2-like NIY05_01285 IPR002645 STAS domain NIY05_01285 IPR011547 SLC26A/SulP transporter domain NIY05_01285 IPR036513 STAS domain superfamily NIY05_01285 IPR001902 SLC26A/SulP transporter NIY05_01290 IPR036291 NAD(P)-binding domain superfamily NIY05_01290 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_01290 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_01295 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_01295 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_01295 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_01295 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase NIY05_01295 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme NIY05_01300 IPR032781 ABC-transporter extension domain NIY05_01300 IPR003439 ABC transporter-like NIY05_01300 IPR017871 ABC transporter, conserved site NIY05_01300 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_01300 IPR003593 AAA+ ATPase domain NIY05_01300 IPR022374 Energy-dependent translational throttle protein EttA NIY05_01325 IPR007318 Phospholipid methyltransferase NIY05_01345 IPR006143 RND efflux pump, membrane fusion protein NIY05_01345 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIY05_01345 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB NIY05_01350 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA NIY05_01350 IPR001036 Acriflavin resistance protein NIY05_01350 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIY05_01355 IPR036837 Cation efflux protein, cytoplasmic domain superfamily NIY05_01355 IPR002524 Cation efflux protein NIY05_01355 IPR027469 Cation efflux transmembrane domain superfamily NIY05_01385 IPR004841 Amino acid permease/ SLC12A domain NIY05_01385 IPR004840 Amino acid permease, conserved site NIY05_01400 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 NIY05_01400 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding NIY05_01400 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NIY05_01400 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial NIY05_01400 IPR000924 Glutamyl/glutaminyl-tRNA synthetase NIY05_01400 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain NIY05_01400 IPR033910 Glutamyl-tRNA synthetase NIY05_01400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_01410 IPR000957 Sulphate/thiosulphate-binding, conserved site NIY05_01410 IPR034408 Sulphate/thiosulphate-binding site NIY05_01410 IPR005669 Thiosulphate/Sulfate-binding protein NIY05_01415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_01415 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily NIY05_01415 IPR002903 Ribosomal RNA small subunit methyltransferase H NIY05_01425 IPR012338 Beta-lactamase/transpeptidase-like NIY05_01425 IPR037532 Peptidoglycan D,D-transpeptidase FtsI NIY05_01425 IPR005311 Penicillin-binding protein, dimerisation domain NIY05_01425 IPR036138 Penicillin-binding protein, dimerisation domain superfamily NIY05_01425 IPR001460 Penicillin-binding protein, transpeptidase NIY05_01430 IPR036565 Mur-like, catalytic domain superfamily NIY05_01430 IPR004101 Mur ligase, C-terminal NIY05_01430 IPR036615 Mur ligase, C-terminal domain superfamily NIY05_01430 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase NIY05_01430 IPR035911 MurE/MurF, N-terminal NIY05_01430 IPR000713 Mur ligase, N-terminal catalytic domain NIY05_01430 IPR013221 Mur ligase, central NIY05_01435 IPR004101 Mur ligase, C-terminal NIY05_01435 IPR036615 Mur ligase, C-terminal domain superfamily NIY05_01435 IPR013221 Mur ligase, central NIY05_01435 IPR000713 Mur ligase, N-terminal catalytic domain NIY05_01435 IPR035911 MurE/MurF, N-terminal NIY05_01435 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase NIY05_01435 IPR036565 Mur-like, catalytic domain superfamily NIY05_01440 IPR000715 Glycosyl transferase, family 4 NIY05_01440 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase NIY05_01440 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site NIY05_01450 IPR025714 Methyltransferase domain NIY05_01450 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted NIY05_01450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_01455 IPR001460 Penicillin-binding protein, transpeptidase NIY05_01455 IPR031376 Penicillin-binding protein, OB-like domain NIY05_01455 IPR001264 Glycosyl transferase, family 51 NIY05_01455 IPR023346 Lysozyme-like domain superfamily NIY05_01455 IPR012338 Beta-lactamase/transpeptidase-like NIY05_01455 IPR036950 Penicillin binding protein transglycosylase domain NIY05_01460 IPR005883 Type IV pilus assembly protein PilM NIY05_01460 IPR003494 SHS2 domain inserted in FtsA NIY05_01465 IPR007813 Fimbrial assembly PilN NIY05_01470 IPR007445 Pilus assembly protein, PilO NIY05_01470 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 NIY05_01480 IPR004845 Type II secretion system GspD, conserved site NIY05_01480 IPR004846 Type II/III secretion system NIY05_01480 IPR011662 Secretin/TonB, short N-terminal domain NIY05_01480 IPR038591 NolW-like superfamily NIY05_01480 IPR005644 NolW-like NIY05_01480 IPR001775 GspD/PilQ family NIY05_01480 IPR021731 AMIN domain NIY05_01480 IPR013355 Type IV pilus secretin PilQ NIY05_01485 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_01485 IPR031322 Shikimate kinase/gluconokinase NIY05_01485 IPR000623 Shikimate kinase/Threonine synthase-like 1 NIY05_01485 IPR023000 Shikimate kinase, conserved site NIY05_01490 IPR016037 3-dehydroquinate synthase AroB NIY05_01490 IPR030963 3-dehydroquinate synthase family NIY05_01490 IPR030960 3-dehydroquinate synthase domain NIY05_01500 IPR029055 Nucleophile aminohydrolases, N-terminal NIY05_01500 IPR002932 Glutamate synthase domain NIY05_01500 IPR013785 Aldolase-type TIM barrel NIY05_01500 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily NIY05_01500 IPR002489 Glutamate synthase, alpha subunit, C-terminal NIY05_01500 IPR017932 Glutamine amidotransferase type 2 domain NIY05_01500 IPR006982 Glutamate synthase, central-N NIY05_01505 IPR028261 Dihydroprymidine dehydrogenase domain II NIY05_01505 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_01505 IPR023753 FAD/NAD(P)-binding domain NIY05_01505 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 NIY05_01505 IPR009051 Alpha-helical ferredoxin NIY05_01515 IPR023353 LemA-like domain superfamily NIY05_01515 IPR007156 LemA NIY05_01520 IPR007621 TPM domain NIY05_01530 IPR000983 Bacterial general secretion pathway protein G-type pilin NIY05_01530 IPR001082 Fimbrial protein pilin NIY05_01530 IPR012902 Prokaryotic N-terminal methylation site NIY05_01540 IPR007016 O-antigen ligase-related NIY05_01540 IPR031726 Protein glycosylation ligase domain NIY05_01540 IPR021797 Virulence factor membrane-bound polymerase, C-terminal NIY05_01550 IPR008331 Ferritin/DPS protein domain NIY05_01550 IPR012347 Ferritin-like NIY05_01550 IPR009040 Ferritin-like diiron domain NIY05_01550 IPR002024 Bacterioferritin NIY05_01550 IPR009078 Ferritin-like superfamily NIY05_01555 IPR007419 BFD-like [2Fe-2S]-binding domain NIY05_01555 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily NIY05_01560 IPR019897 RidA, conserved site NIY05_01560 IPR035959 RutC-like superfamily NIY05_01560 IPR006175 YjgF/YER057c/UK114 family NIY05_01560 IPR006056 RidA family NIY05_01565 IPR002912 ACT domain NIY05_01565 IPR012675 Beta-grasp domain superfamily NIY05_01565 IPR003607 HD/PDEase domain NIY05_01565 IPR004811 RelA/SpoT family NIY05_01565 IPR007685 RelA/SpoT NIY05_01565 IPR004095 TGS NIY05_01565 IPR033655 RelA, TGS domain NIY05_01565 IPR012676 TGS-like NIY05_01575 IPR003716 DNA-directed RNA polymerase, omega subunit NIY05_01575 IPR006110 RNA polymerase, subunit omega/K/RPB6 NIY05_01575 IPR012293 RNA polymerase subunit, RPB6/omega NIY05_01575 IPR036161 RPB6/omega subunit-like superfamily NIY05_01580 IPR008145 Guanylate kinase/L-type calcium channel beta subunit NIY05_01580 IPR008144 Guanylate kinase-like domain NIY05_01580 IPR017665 Guanylate kinase NIY05_01580 IPR020590 Guanylate kinase, conserved site NIY05_01580 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_01585 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase NIY05_01625 IPR000307 Ribosomal protein S16 NIY05_01625 IPR020592 Ribosomal protein S16, conserved site NIY05_01625 IPR023803 Ribosomal protein S16 domain superfamily NIY05_01630 IPR011961 16S rRNA processing protein RimM NIY05_01630 IPR027275 PRC-barrel domain NIY05_01630 IPR011033 PRC-barrel-like superfamily NIY05_01630 IPR002676 RimM, N-terminal NIY05_01630 IPR036976 RimM, N-terminal domain superfamily NIY05_01630 IPR009000 Translation protein, beta-barrel domain superfamily NIY05_01635 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain NIY05_01635 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NIY05_01635 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal NIY05_01635 IPR029028 Alpha/beta knot methyltransferases NIY05_01635 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria NIY05_01640 IPR008991 Translation protein SH3-like domain superfamily NIY05_01640 IPR038657 Ribosomal protein L19 superfamily NIY05_01640 IPR001857 Ribosomal protein L19 NIY05_01640 IPR018257 Ribosomal protein L19, conserved site NIY05_01645 IPR000073 Alpha/beta hydrolase fold-1 NIY05_01645 IPR029058 Alpha/Beta hydrolase fold NIY05_01650 IPR004961 Lipase chaperone NIY05_01655 IPR032819 tRNA pseudouridylate synthase B, C-terminal NIY05_01655 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal NIY05_01655 IPR014780 tRNA pseudouridine synthase II, TruB NIY05_01655 IPR015947 PUA-like superfamily NIY05_01655 IPR002501 Pseudouridine synthase II, N-terminal NIY05_01655 IPR020103 Pseudouridine synthase, catalytic domain superfamily NIY05_01660 IPR002781 Transmembrane protein TauE-like NIY05_01670 IPR000620 EamA domain NIY05_01675 IPR000620 EamA domain NIY05_01680 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain NIY05_01680 IPR036291 NAD(P)-binding domain superfamily NIY05_01680 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NIY05_01680 IPR002912 ACT domain NIY05_01680 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NIY05_01680 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 NIY05_01685 IPR016166 FAD-binding domain, PCMH-type NIY05_01685 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 NIY05_01685 IPR036318 FAD-binding, type PCMH-like superfamily NIY05_01685 IPR016164 FAD-linked oxidase-like, C-terminal NIY05_01685 IPR004113 FAD-linked oxidase, C-terminal NIY05_01685 IPR006094 FAD linked oxidase, N-terminal NIY05_01685 IPR004490 Glycolate oxidase subunit GlcD NIY05_01695 IPR011008 Dimeric alpha-beta barrel NIY05_01695 IPR007138 Antibiotic biosynthesis monooxygenase domain NIY05_01700 IPR029039 Flavoprotein-like superfamily NIY05_01700 IPR003680 Flavodoxin-like fold NIY05_01710 IPR005829 Sugar transporter, conserved site NIY05_01710 IPR036259 MFS transporter superfamily NIY05_01710 IPR020846 Major facilitator superfamily domain NIY05_01710 IPR011701 Major facilitator superfamily NIY05_01715 IPR010019 Integral membrane protein, YccS NIY05_01715 IPR010020 Integral membrane protein, YccS/YhfK NIY05_01715 IPR032692 Integral membrane protein YccS, N-terminal NIY05_01720 IPR018152 Superoxide dismutase, copper/zinc, binding site NIY05_01720 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone NIY05_01720 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily NIY05_01720 IPR001424 Superoxide dismutase, copper/zinc binding domain NIY05_01725 IPR002549 Transmembrane protein TqsA-like NIY05_01730 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_01730 IPR025669 AAA domain NIY05_01760 IPR004840 Amino acid permease, conserved site NIY05_01760 IPR004841 Amino acid permease/ SLC12A domain NIY05_01765 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase NIY05_01765 IPR033524 Leu/Phe/Val dehydrogenases active site NIY05_01765 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal NIY05_01765 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain NIY05_01765 IPR036291 NAD(P)-binding domain superfamily NIY05_01765 IPR033922 NAD(P) binding domain of glutamate dehydrogenase NIY05_01765 IPR014362 Glutamate dehydrogenase NIY05_01770 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_01770 IPR005814 Aminotransferase class-III NIY05_01770 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_01770 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_01770 IPR026330 Succinylornithine transaminase NIY05_01770 IPR004636 Acetylornithine/Succinylornithine transaminase family NIY05_01770 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria NIY05_01775 IPR016181 Acyl-CoA N-acyltransferase NIY05_01775 IPR007041 Arginine N-succinyltransferase AstA/AruG NIY05_01775 IPR017650 Arginine N-succinyltransferase NIY05_01780 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_01780 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_01780 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_01780 IPR016160 Aldehyde dehydrogenase, cysteine active site NIY05_01780 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NIY05_01780 IPR015590 Aldehyde dehydrogenase domain NIY05_01780 IPR017649 Succinylglutamate-semialdehyde dehydrogenase NIY05_01785 IPR007079 Succinylarginine dihydrolase NIY05_01785 IPR037031 Succinylarginine dihydrolase superfamily NIY05_01790 IPR007036 Succinylglutamate desuccinylase/aspartoacylase NIY05_01790 IPR016681 Succinylglutamate desuccinylase NIY05_01805 IPR023828 Peptidase S8, subtilisin, Ser-active site NIY05_01805 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 NIY05_01805 IPR022398 Peptidase S8, subtilisin, His-active site NIY05_01805 IPR015500 Peptidase S8, subtilisin-related NIY05_01805 IPR036852 Peptidase S8/S53 domain superfamily NIY05_01805 IPR000209 Peptidase S8/S53 domain NIY05_01805 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily NIY05_01805 IPR023827 Peptidase S8, subtilisin, Asp-active site NIY05_01805 IPR034202 Subtilisin Carlsberg-like catalytic domain NIY05_01820 IPR005119 LysR, substrate-binding NIY05_01820 IPR000847 Transcription regulator HTH, LysR NIY05_01820 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_01820 IPR036390 Winged helix DNA-binding domain superfamily NIY05_01825 IPR000620 EamA domain NIY05_01835 IPR008909 DALR anticodon binding NIY05_01835 IPR015944 Glycine-tRNA ligase, beta subunit NIY05_01835 IPR006194 Glycine-tRNA synthetase, heterodimeric NIY05_01840 IPR006194 Glycine-tRNA synthetase, heterodimeric NIY05_01840 IPR002310 Glycine-tRNA ligase, alpha subunit NIY05_01865 IPR000644 CBS domain NIY05_01870 IPR007168 Phage shock protein, PspC, N-terminal NIY05_01880 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_01880 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_01880 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_01880 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_01880 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_01880 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_01880 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain NIY05_01890 IPR022893 Shikimate dehydrogenase family NIY05_01890 IPR036291 NAD(P)-binding domain superfamily NIY05_01890 IPR041121 SDH, C-terminal NIY05_01890 IPR011342 Shikimate dehydrogenase NIY05_01890 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase NIY05_01890 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal NIY05_01895 IPR001260 Coproporphyrinogen III oxidase, aerobic NIY05_01895 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily NIY05_01895 IPR018375 Coproporphyrinogen III oxidase, conserved site NIY05_01900 IPR000926 GTP cyclohydrolase II, RibA NIY05_01900 IPR032677 GTP cyclohydrolase II NIY05_01900 IPR036144 RibA-like superfamily NIY05_01905 IPR005477 Deoxyxylulose-5-phosphate synthase NIY05_01905 IPR029061 Thiamin diphosphate-binding fold NIY05_01905 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II NIY05_01905 IPR005475 Transketolase-like, pyrimidine-binding domain NIY05_01905 IPR020826 Transketolase binding site NIY05_01905 IPR033248 Transketolase, C-terminal domain NIY05_01910 IPR020583 Inositol monophosphatase, metal-binding site NIY05_01910 IPR022337 Inositol monophosphatase, SuhB NIY05_01910 IPR020550 Inositol monophosphatase, conserved site NIY05_01910 IPR000760 Inositol monophosphatase-like NIY05_01910 IPR033942 Inositol monophosphatase NIY05_01915 IPR011545 DEAD/DEAH box helicase domain NIY05_01915 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain NIY05_01915 IPR034415 CsdA, RNA recognition motif NIY05_01915 IPR021046 Cold-shock protein, DEAD box A, C-terminal NIY05_01915 IPR028618 ATP-dependent RNA helicase DeaD NIY05_01915 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_01915 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIY05_01915 IPR014014 RNA helicase, DEAD-box type, Q motif NIY05_01915 IPR001650 Helicase, C-terminal NIY05_01915 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily NIY05_01915 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site NIY05_01925 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_01925 IPR003439 ABC transporter-like NIY05_01925 IPR003593 AAA+ ATPase domain NIY05_01925 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl NIY05_01925 IPR017871 ABC transporter, conserved site NIY05_01930 IPR030802 ABC transporter permease MalE NIY05_01930 IPR003453 ABC transport permease subunit MlaE, Proteobacteria NIY05_01940 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC NIY05_01940 IPR042245 Tgt2/MlaC superfamily NIY05_01950 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB NIY05_01950 IPR004488 Magnesium/cobalt transport protein CorA NIY05_01955 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG NIY05_01955 IPR031100 LOG family NIY05_01960 IPR020476 NUDIX hydrolase NIY05_01960 IPR015797 NUDIX hydrolase-like domain superfamily NIY05_01960 IPR020084 NUDIX hydrolase, conserved site NIY05_01960 IPR000086 NUDIX hydrolase domain NIY05_01965 IPR005222 Competence protein ComF NIY05_01965 IPR000836 Phosphoribosyltransferase domain NIY05_01965 IPR029057 Phosphoribosyltransferase-like NIY05_01970 IPR033454 RecG, wedge domain NIY05_01970 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_01970 IPR012340 Nucleic acid-binding, OB-fold NIY05_01970 IPR001650 Helicase, C-terminal NIY05_01970 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIY05_01970 IPR011545 DEAD/DEAH box helicase domain NIY05_01970 IPR004609 ATP-dependent DNA helicase RecG NIY05_01980 IPR038404 TRAP transporter solute receptor DctP superfamily NIY05_01985 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase NIY05_01985 IPR002123 Phospholipid/glycerol acyltransferase NIY05_01985 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB NIY05_01985 IPR041728 GPAT/DHAPAT, acyltransferase domain NIY05_01990 IPR003703 Acyl-CoA thioesterase NIY05_01990 IPR029069 HotDog domain superfamily NIY05_01995 IPR034703 Proton/glutamate-aspartate symporter GltP NIY05_01995 IPR033380 Glutamate-aspartate symport protein GltP/GltT NIY05_01995 IPR001991 Sodium:dicarboxylate symporter NIY05_01995 IPR018107 Sodium:dicarboxylate symporter, conserved site NIY05_01995 IPR036458 Sodium:dicarboxylate symporter superfamily NIY05_02005 IPR006073 GTP binding domain NIY05_02005 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC NIY05_02005 IPR030393 EngB-type guanine nucleotide-binding (G) domain NIY05_02005 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_02010 IPR023761 Transcriptional repressor HTH, NsrR NIY05_02010 IPR036390 Winged helix DNA-binding domain superfamily NIY05_02010 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_02010 IPR030489 Transcription regulator Rrf2-type, conserved site NIY05_02010 IPR000944 Transcription regulator Rrf2-type NIY05_02015 IPR023950 Flavohemoprotein NIY05_02015 IPR001433 Oxidoreductase FAD/NAD(P)-binding NIY05_02015 IPR012292 Globin/Protoglobin NIY05_02015 IPR009050 Globin-like superfamily NIY05_02015 IPR000971 Globin NIY05_02015 IPR017938 Riboflavin synthase-like beta-barrel NIY05_02015 IPR017927 FAD-binding domain, ferredoxin reductase-type NIY05_02015 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain NIY05_02015 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NIY05_02020 IPR033186 Helicase HerA-like C-terminal NIY05_02020 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_02025 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_02025 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_02025 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_02025 IPR006233 Cystathionine beta-lyase, bacterial NIY05_02025 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme NIY05_02030 IPR029062 Class I glutamine amidotransferase-like NIY05_02030 IPR017926 Glutamine amidotransferase NIY05_02035 IPR018268 Ribosomal protein S10, conserved site NIY05_02035 IPR027486 Ribosomal protein S10 domain NIY05_02035 IPR001848 Ribosomal protein S10 NIY05_02035 IPR036838 Ribosomal protein S10 domain superfamily NIY05_02040 IPR019927 Ribosomal protein L3, bacterial/organelle-type NIY05_02040 IPR000597 Ribosomal protein L3 NIY05_02040 IPR019926 Ribosomal protein L3, conserved site NIY05_02040 IPR009000 Translation protein, beta-barrel domain superfamily NIY05_02045 IPR002136 Ribosomal protein L4/L1e NIY05_02045 IPR023574 Ribosomal protein L4 domain superfamily NIY05_02045 IPR013005 50S ribosomal protein uL4 NIY05_02050 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily NIY05_02050 IPR012678 Ribosomal protein L23/L15e core domain superfamily NIY05_02050 IPR013025 Ribosomal protein L25/L23 NIY05_02055 IPR022666 Ribosomal Proteins L2, RNA binding domain NIY05_02055 IPR012340 Nucleic acid-binding, OB-fold NIY05_02055 IPR014726 Ribosomal protein L2, domain 3 NIY05_02055 IPR022669 Ribosomal protein L2, C-terminal NIY05_02055 IPR008991 Translation protein SH3-like domain superfamily NIY05_02055 IPR005880 Ribosomal protein L2, bacterial/organellar-type NIY05_02055 IPR002171 Ribosomal protein L2 NIY05_02055 IPR014722 Ribosomal protein L2, domain 2 NIY05_02060 IPR023575 Ribosomal protein S19, superfamily NIY05_02060 IPR005732 Ribosomal protein S19, bacterial-type NIY05_02060 IPR002222 Ribosomal protein S19/S15 NIY05_02060 IPR020934 Ribosomal protein S19 conserved site NIY05_02065 IPR001063 Ribosomal protein L22/L17 NIY05_02065 IPR018260 Ribosomal protein L22/L17, conserved site NIY05_02065 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type NIY05_02065 IPR036394 Ribosomal protein L22/L17 superfamily NIY05_02075 IPR000114 Ribosomal protein L16 NIY05_02075 IPR036920 Ribosomal protein L10e/L16 superfamily NIY05_02075 IPR016180 Ribosomal protein L10e/L16 NIY05_02075 IPR020798 Ribosomal protein L16, conserved site NIY05_02080 IPR001854 Ribosomal protein L29/L35 NIY05_02080 IPR036049 Ribosomal protein L29/L35 superfamily NIY05_02085 IPR019984 30S ribosomal protein S17 NIY05_02085 IPR000266 Ribosomal protein S17/S11 NIY05_02085 IPR019979 Ribosomal protein S17, conserved site NIY05_02085 IPR012340 Nucleic acid-binding, OB-fold NIY05_02090 IPR005745 Ribosomal protein L14P, bacterial-type NIY05_02090 IPR036853 Ribosomal protein L14 superfamily NIY05_02090 IPR000218 Ribosomal protein L14P NIY05_02090 IPR019972 Ribosomal protein L14P, conserved site NIY05_02095 IPR003256 Ribosomal protein L24 NIY05_02095 IPR005825 Ribosomal protein L24/L26, conserved site NIY05_02095 IPR008991 Translation protein SH3-like domain superfamily NIY05_02095 IPR014722 Ribosomal protein L2, domain 2 NIY05_02095 IPR041988 Ribosomal Protein L26/L24, KOW domain NIY05_02095 IPR005824 KOW NIY05_02100 IPR002132 Ribosomal protein L5 NIY05_02100 IPR020930 Ribosomal protein L5, bacterial-type NIY05_02100 IPR031309 Ribosomal protein L5, C-terminal NIY05_02100 IPR020929 Ribosomal protein L5, conserved site NIY05_02100 IPR022803 Ribosomal protein L5 domain superfamily NIY05_02100 IPR031310 Ribosomal protein L5, N-terminal NIY05_02105 IPR023036 Ribosomal protein S14, bacterial/plastid NIY05_02105 IPR018271 Ribosomal protein S14, conserved site NIY05_02105 IPR001209 Ribosomal protein S14 NIY05_02110 IPR035987 Ribosomal protein S8 superfamily NIY05_02110 IPR000630 Ribosomal protein S8 NIY05_02115 IPR002358 Ribosomal protein L6, conserved site NIY05_02115 IPR020040 Ribosomal protein L6, alpha-beta domain NIY05_02115 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily NIY05_02115 IPR000702 Ribosomal protein L6 NIY05_02115 IPR019906 Ribosomal protein L6, bacterial-type NIY05_02120 IPR005484 Ribosomal protein L18 NIY05_02120 IPR004389 Ribosomal protein L18, bacterial-type NIY05_02125 IPR000851 Ribosomal protein S5 NIY05_02125 IPR005712 Ribosomal protein S5, bacterial-type NIY05_02125 IPR005324 Ribosomal protein S5, C-terminal NIY05_02125 IPR020568 Ribosomal protein S5 domain 2-type fold NIY05_02125 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIY05_02125 IPR013810 Ribosomal protein S5, N-terminal NIY05_02125 IPR018192 Ribosomal protein S5, N-terminal, conserved site NIY05_02130 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily NIY05_02130 IPR005996 Ribosomal protein L30, bacterial-type NIY05_02130 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain NIY05_02135 IPR021131 Ribosomal protein L18e/L15P NIY05_02135 IPR030878 Ribosomal protein L15 NIY05_02135 IPR005749 Ribosomal protein L15, bacterial-type NIY05_02135 IPR001196 Ribosomal protein L15, conserved site NIY05_02135 IPR036227 Ribosomal L18e/L15P superfamily NIY05_02140 IPR026593 Protein translocase subunit SecY NIY05_02140 IPR002208 SecY/SEC61-alpha family NIY05_02140 IPR030659 SecY conserved site NIY05_02140 IPR023201 SecY domain superfamily NIY05_02145 IPR035977 Ribosomal protein L36 superfamily NIY05_02145 IPR000473 Ribosomal protein L36 NIY05_02150 IPR027437 30s ribosomal protein S13, C-terminal NIY05_02150 IPR018269 Ribosomal protein S13, conserved site NIY05_02150 IPR001892 Ribosomal protein S13 NIY05_02150 IPR010979 Ribosomal protein S13-like, H2TH NIY05_02150 IPR019980 Ribosomal protein S13, bacterial-type NIY05_02155 IPR001971 Ribosomal protein S11 NIY05_02155 IPR019981 Ribosomal protein S11, bacterial-type NIY05_02155 IPR018102 Ribosomal S11, conserved site NIY05_02155 IPR036967 Ribosomal protein S11 superfamily NIY05_02160 IPR001912 Ribosomal protein S4/S9, N-terminal NIY05_02160 IPR005709 Ribosomal protein S4, bacterial-type NIY05_02160 IPR018079 Ribosomal protein S4, conserved site NIY05_02160 IPR002942 RNA-binding S4 domain NIY05_02160 IPR036986 RNA-binding S4 domain superfamily NIY05_02160 IPR022801 Ribosomal protein S4/S9 NIY05_02165 IPR036643 DNA-directed RNA polymerase, insert domain superfamily NIY05_02165 IPR011260 RNA polymerase, alpha subunit, C-terminal NIY05_02165 IPR011773 DNA-directed RNA polymerase, alpha subunit NIY05_02165 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type NIY05_02165 IPR011262 DNA-directed RNA polymerase, insert domain NIY05_02165 IPR036603 RNA polymerase, RBP11-like subunit NIY05_02170 IPR000456 Ribosomal protein L17 NIY05_02170 IPR036373 Ribosomal protein L17 superfamily NIY05_02175 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_02175 IPR020946 Flavin monooxygenase-like NIY05_02180 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_02180 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_02180 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_02180 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_02180 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_02180 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_02180 IPR006089 Acyl-CoA dehydrogenase, conserved site NIY05_02185 IPR036714 Flavinator of succinate dehydrogenase superfamily NIY05_02185 IPR005631 Flavinator of succinate dehydrogenase NIY05_02215 IPR012658 Conserved hypothetical protein CHP02443 NIY05_02220 IPR001567 Peptidase M3A/M3B catalytic domain NIY05_02220 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 NIY05_02225 IPR022966 Ribonuclease II/R, conserved site NIY05_02225 IPR013223 Ribonuclease B, N-terminal OB domain NIY05_02225 IPR001900 Ribonuclease II/R NIY05_02225 IPR004476 Ribonuclease II/ribonuclease R NIY05_02225 IPR011805 Ribonuclease R NIY05_02225 IPR012340 Nucleic acid-binding, OB-fold NIY05_02225 IPR013668 Ribonuclease R winged-helix domain NIY05_02225 IPR040476 RNase II/RNase R, cold shock domain NIY05_02225 IPR003029 S1 domain NIY05_02225 IPR022967 RNA-binding domain, S1 NIY05_02225 IPR011129 Cold shock domain NIY05_02270 IPR011234 Fumarylacetoacetase-like, C-terminal NIY05_02270 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily NIY05_02275 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily NIY05_02275 IPR011051 RmlC-like cupin domain superfamily NIY05_02275 IPR020449 Transcription regulator HTH, AraC- type NIY05_02275 IPR018062 HTH domain AraC-type, conserved site NIY05_02275 IPR018060 DNA binding HTH domain, AraC-type NIY05_02275 IPR009057 Homeobox-like domain superfamily NIY05_02275 IPR014710 RmlC-like jelly roll fold NIY05_02280 IPR000620 EamA domain NIY05_02285 IPR023679 Uncharacterised protein family UPF0761, bacterial NIY05_02285 IPR017039 Virulence factor BrkB NIY05_02290 IPR008254 Flavodoxin/nitric oxide synthase NIY05_02290 IPR001226 Flavodoxin, conserved site NIY05_02290 IPR029039 Flavoprotein-like superfamily NIY05_02290 IPR010089 Flavoprotein WrbA-like NIY05_02290 IPR005025 NADPH-dependent FMN reductase-like NIY05_02295 IPR010079 Xanthine phosphoribosyltransferase NIY05_02295 IPR000836 Phosphoribosyltransferase domain NIY05_02295 IPR029057 Phosphoribosyltransferase-like NIY05_02315 IPR023091 Metalloprotease catalytic domain superfamily, predicted NIY05_02315 IPR002036 Endoribonuclease YbeY NIY05_02315 IPR020549 Endoribonuclease YbeY, conserved site NIY05_02320 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_02320 IPR003714 PhoH-like protein NIY05_02325 IPR002792 TRAM domain NIY05_02325 IPR023404 Radical SAM, alpha/beta horseshoe NIY05_02325 IPR007197 Radical SAM NIY05_02325 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB NIY05_02325 IPR013848 Methylthiotransferase, N-terminal NIY05_02325 IPR020612 Methylthiotransferase, conserved site NIY05_02325 IPR005839 Methylthiotransferase NIY05_02325 IPR006638 Elp3/MiaB/NifB NIY05_02325 IPR038135 Methylthiotransferase, N-terminal domain superfamily NIY05_02330 IPR000189 Prokaryotic transglycosylase, active site NIY05_02330 IPR010090 Phage tail tape measure protein NIY05_02330 IPR008258 Transglycosylase SLT domain 1 NIY05_02330 IPR023346 Lysozyme-like domain superfamily NIY05_02330 IPR016047 Peptidase M23 NIY05_02330 IPR011055 Duplicated hybrid motif NIY05_02340 IPR001236 Lactate/malate dehydrogenase, N-terminal NIY05_02340 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal NIY05_02340 IPR010945 Malate dehydrogenase, type 2 NIY05_02340 IPR036291 NAD(P)-binding domain superfamily NIY05_02340 IPR001557 L-lactate/malate dehydrogenase NIY05_02340 IPR022383 Lactate/malate dehydrogenase, C-terminal NIY05_02360 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NIY05_02360 IPR007473 Ribosomal RNA large subunit methyltransferase J NIY05_02360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_02365 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase NIY05_02365 IPR000462 CDP-alcohol phosphatidyltransferase NIY05_02410 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_02410 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_02410 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_02410 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_02410 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_02410 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_02410 IPR006089 Acyl-CoA dehydrogenase, conserved site NIY05_02415 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NIY05_02415 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal NIY05_02415 IPR001647 DNA-binding HTH domain, TetR-type NIY05_02415 IPR009057 Homeobox-like domain superfamily NIY05_02425 IPR036291 NAD(P)-binding domain superfamily NIY05_02425 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_02430 IPR029045 ClpP/crotonase-like domain superfamily NIY05_02430 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal NIY05_02430 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal NIY05_02430 IPR034733 Acetyl-CoA carboxylase NIY05_02435 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_02435 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_02435 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_02435 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_02435 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_02435 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_02435 IPR006089 Acyl-CoA dehydrogenase, conserved site NIY05_02445 IPR011054 Rudiment single hybrid motif NIY05_02445 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain NIY05_02445 IPR000089 Biotin/lipoyl attachment NIY05_02445 IPR005482 Biotin carboxylase, C-terminal NIY05_02445 IPR011764 Biotin carboxylation domain NIY05_02445 IPR001882 Biotin-binding site NIY05_02445 IPR005481 Biotin carboxylase-like, N-terminal domain NIY05_02445 IPR011761 ATP-grasp fold NIY05_02445 IPR011053 Single hybrid motif NIY05_02445 IPR016185 Pre-ATP-grasp domain superfamily NIY05_02455 IPR007481 Stringent starvation protein B NIY05_02455 IPR036760 SspB-like superfamily NIY05_02460 IPR010987 Glutathione S-transferase, C-terminal-like NIY05_02460 IPR004045 Glutathione S-transferase, N-terminal NIY05_02460 IPR036282 Glutathione S-transferase, C-terminal domain superfamily NIY05_02460 IPR040079 Glutathione Transferase family NIY05_02460 IPR004046 Glutathione S-transferase, C-terminal NIY05_02460 IPR034341 Stringent starvation protein A, N-terminal NIY05_02460 IPR036249 Thioredoxin-like superfamily NIY05_02465 IPR000754 Ribosomal protein S9 NIY05_02465 IPR020568 Ribosomal protein S5 domain 2-type fold NIY05_02465 IPR023035 Ribosomal protein S9, bacterial/plastid NIY05_02465 IPR020574 Ribosomal protein S9, conserved site NIY05_02465 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIY05_02470 IPR036899 Ribosomal protein L13 superfamily NIY05_02470 IPR005823 Ribosomal protein L13, bacterial-type NIY05_02470 IPR005822 Ribosomal protein L13 NIY05_02475 IPR005255 PdxA family NIY05_02475 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase NIY05_02480 IPR023165 rRNA adenine dimethylase-like NIY05_02480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_02480 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site NIY05_02480 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm NIY05_02480 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal NIY05_02480 IPR011530 Ribosomal RNA adenine dimethylase NIY05_02485 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type NIY05_02485 IPR029052 Metallo-dependent phosphatase-like NIY05_02485 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) NIY05_02505 IPR035647 EF-G domain III/V-like NIY05_02505 IPR030394 HflX-type guanine nucleotide-binding (G) domain NIY05_02505 IPR032305 GTP-binding protein, middle domain NIY05_02505 IPR006073 GTP binding domain NIY05_02505 IPR016496 GTPase HflX NIY05_02505 IPR042108 GTPase HflX, N-terminal domain superfamily NIY05_02505 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_02505 IPR025121 GTPase HflX, N-terminal NIY05_02515 IPR030871 Cardiolipin synthase C NIY05_02515 IPR025202 Phospholipase D-like domain NIY05_02515 IPR001736 Phospholipase D/Transphosphatidylase NIY05_02520 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type NIY05_02520 IPR029052 Metallo-dependent phosphatase-like NIY05_02520 IPR006311 Twin-arginine translocation pathway, signal sequence NIY05_02520 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NIY05_02525 IPR000498 Outer membrane protein OmpA-like, transmembrane domain NIY05_02525 IPR006690 Outer membrane protein, OmpA-like, conserved site NIY05_02525 IPR036737 OmpA-like domain superfamily NIY05_02525 IPR002368 Outer membrane protein, OmpA NIY05_02525 IPR006664 Outer membrane protein, bacterial NIY05_02525 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel NIY05_02525 IPR006665 OmpA-like domain NIY05_02530 IPR033417 Periplasmic sensor domain CHASE8 NIY05_02530 IPR000160 GGDEF domain NIY05_02530 IPR003660 HAMP domain NIY05_02530 IPR029787 Nucleotide cyclase NIY05_02565 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site NIY05_02565 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIY05_02565 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I NIY05_02565 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily NIY05_02565 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_02565 IPR006258 Dihydrolipoamide dehydrogenase NIY05_02565 IPR023753 FAD/NAD(P)-binding domain NIY05_02575 IPR005939 Beta-lactamase hydrolase-like NIY05_02575 IPR001279 Metallo-beta-lactamase NIY05_02575 IPR029021 Protein-tyrosine phosphatase-like NIY05_02575 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NIY05_02580 IPR029058 Alpha/Beta hydrolase fold NIY05_02580 IPR000073 Alpha/beta hydrolase fold-1 NIY05_02585 IPR005746 Thioredoxin NIY05_02585 IPR036249 Thioredoxin-like superfamily NIY05_02585 IPR017937 Thioredoxin, conserved site NIY05_02585 IPR013766 Thioredoxin domain NIY05_02590 IPR006683 Thioesterase domain NIY05_02590 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase NIY05_02590 IPR029069 HotDog domain superfamily NIY05_02590 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain NIY05_02600 IPR007551 Protein of unknown function DUF520 NIY05_02600 IPR036183 YajQ-like superfamily NIY05_02600 IPR035570 UPF0234, N-terminal NIY05_02600 IPR035571 UPF0234-like, C-terminal NIY05_02610 IPR006076 FAD dependent oxidoreductase NIY05_02610 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_02610 IPR008471 MnmC-like methyltransferase NIY05_02610 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC NIY05_02610 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal NIY05_02620 IPR011008 Dimeric alpha-beta barrel NIY05_02620 IPR005545 YCII-related NIY05_02625 IPR006008 Intracellular septation protein A NIY05_02630 IPR004013 PHP domain NIY05_02630 IPR003141 Polymerase/histidinol phosphatase, N-terminal NIY05_02630 IPR016195 Polymerase/histidinol phosphatase-like NIY05_02635 IPR021134 Bestrophin/UPF0187 NIY05_02640 IPR025657 RadC-like JAB domain NIY05_02640 IPR037518 MPN domain NIY05_02640 IPR001405 Uncharacterised protein family UPF0758 NIY05_02640 IPR010994 RuvA domain 2-like NIY05_02645 IPR035929 CoaB-like superfamily NIY05_02645 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC NIY05_02645 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal NIY05_02645 IPR036551 Flavin prenyltransferase-like NIY05_02645 IPR003382 Flavoprotein NIY05_02650 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NIY05_02650 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial NIY05_02650 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site NIY05_02650 IPR005665 Protein-export membrane protein SecF, bacterial NIY05_02655 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial NIY05_02655 IPR027398 SecD export protein N-terminal TM domain NIY05_02655 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site NIY05_02655 IPR005791 Protein translocase subunit SecD NIY05_02655 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NIY05_02660 IPR003849 Preprotein translocase YajC NIY05_02665 IPR002616 tRNA-guanine(15) transglycosylase-like NIY05_02665 IPR036511 Queuine tRNA-ribosyltransferase-like NIY05_02665 IPR004803 tRNA-guanine transglycosylase NIY05_02680 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA NIY05_02680 IPR042118 QueA, domain 1 NIY05_02680 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily NIY05_02680 IPR042119 QueA, domain 2 NIY05_02690 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_02690 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_02690 IPR005467 Histidine kinase domain NIY05_02690 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NIY05_02690 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NIY05_02690 IPR011649 KaiB domain NIY05_02690 IPR023527 Adaptive-response sensory-kinase SasA NIY05_02690 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NIY05_02690 IPR036249 Thioredoxin-like superfamily NIY05_02695 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme NIY05_02695 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain NIY05_02695 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase NIY05_02700 IPR033939 Branched-chain aminotransferase NIY05_02700 IPR005785 Branched-chain amino acid aminotransferase I NIY05_02700 IPR018300 Aminotransferase, class IV, conserved site NIY05_02700 IPR001544 Aminotransferase class IV NIY05_02700 IPR036038 Aminotransferase-like, PLP-dependent enzymes NIY05_02715 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel NIY05_02715 IPR002509 NodB homology domain NIY05_02720 IPR029044 Nucleotide-diphospho-sugar transferases NIY05_02720 IPR001173 Glycosyltransferase 2-like NIY05_02725 IPR001296 Glycosyl transferase, family 1 NIY05_02725 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIY05_02750 IPR031358 Stealth protein CR1, conserved region 1 NIY05_02750 IPR021520 Stealth protein CR2, conserved region 2 NIY05_02750 IPR031357 Stealth protein CR3, conserved region 3 NIY05_02755 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) NIY05_02755 IPR006195 Aminoacyl-tRNA synthetase, class II NIY05_02755 IPR004524 Aspartate-tRNA ligase, type 1 NIY05_02755 IPR004115 GAD-like domain superfamily NIY05_02755 IPR029351 GAD domain NIY05_02755 IPR012340 Nucleic acid-binding, OB-fold NIY05_02755 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type NIY05_02755 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb NIY05_02765 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_02765 IPR039426 Vitamin B12 transporter BtuB-like NIY05_02765 IPR012910 TonB-dependent receptor, plug domain NIY05_02765 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_02785 IPR020948 Phosphate-starvation-induced PsiE-like NIY05_02785 IPR009315 Phosphate-starvation-induced PsiE NIY05_02790 IPR036249 Thioredoxin-like superfamily NIY05_02790 IPR004046 Glutathione S-transferase, C-terminal NIY05_02790 IPR004045 Glutathione S-transferase, N-terminal NIY05_02790 IPR040079 Glutathione Transferase family NIY05_02790 IPR036282 Glutathione S-transferase, C-terminal domain superfamily NIY05_02790 IPR010987 Glutathione S-transferase, C-terminal-like NIY05_02795 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_02795 IPR000847 Transcription regulator HTH, LysR NIY05_02795 IPR005119 LysR, substrate-binding NIY05_02795 IPR036390 Winged helix DNA-binding domain superfamily NIY05_02800 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_02800 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_02800 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_02800 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain NIY05_02800 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_02800 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_02800 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_02805 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_02805 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_02805 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_02805 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_02805 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain NIY05_02805 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_02805 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_02815 IPR003660 HAMP domain NIY05_02815 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_02815 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_02815 IPR005467 Histidine kinase domain NIY05_02815 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NIY05_02815 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NIY05_02815 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NIY05_02820 IPR039420 Transcriptional regulatory protein WalR-like NIY05_02820 IPR001789 Signal transduction response regulator, receiver domain NIY05_02820 IPR016032 Signal transduction response regulator, C-terminal effector NIY05_02820 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_02820 IPR011006 CheY-like superfamily NIY05_02820 IPR001867 OmpR/PhoB-type DNA-binding domain NIY05_02825 IPR003846 Protein adenylyltransferase SelO NIY05_02845 IPR016030 Cobalamin adenosyltransferase-like NIY05_02845 IPR036451 Cobalamin adenosyltransferase-like superfamily NIY05_02845 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type NIY05_02850 IPR010917 TonB-dependent receptor, conserved site NIY05_02850 IPR010101 TonB-dependent vitamin B12 transporter BtuB NIY05_02850 IPR039426 Vitamin B12 transporter BtuB-like NIY05_02850 IPR012910 TonB-dependent receptor, plug domain NIY05_02850 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_02850 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_02850 IPR010916 TonB box, conserved site NIY05_02850 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NIY05_02855 IPR013785 Aldolase-type TIM barrel NIY05_02855 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) NIY05_02855 IPR011060 Ribulose-phosphate binding barrel NIY05_02860 IPR001926 Pyridoxal-phosphate dependent enzyme NIY05_02860 IPR006653 Tryptophan synthase, beta chain, conserved site NIY05_02860 IPR006654 Tryptophan synthase, beta chain NIY05_02860 IPR023026 Tryptophan synthase beta chain/beta chain-like NIY05_02860 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIY05_02885 IPR013785 Aldolase-type TIM barrel NIY05_02885 IPR011060 Ribulose-phosphate binding barrel NIY05_02885 IPR018204 Tryptophan synthase, alpha chain, active site NIY05_02885 IPR002028 Tryptophan synthase, alpha chain NIY05_02890 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal NIY05_02890 IPR029045 ClpP/crotonase-like domain superfamily NIY05_02890 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit NIY05_02890 IPR034733 Acetyl-CoA carboxylase NIY05_02895 IPR001645 Folylpolyglutamate synthetase NIY05_02895 IPR018109 Folylpolyglutamate synthetase, conserved site NIY05_02895 IPR036565 Mur-like, catalytic domain superfamily NIY05_02895 IPR004101 Mur ligase, C-terminal NIY05_02895 IPR036615 Mur ligase, C-terminal domain superfamily NIY05_02895 IPR013221 Mur ligase, central NIY05_02910 IPR001279 Metallo-beta-lactamase NIY05_02910 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NIY05_02915 IPR036249 Thioredoxin-like superfamily NIY05_02915 IPR013766 Thioredoxin domain NIY05_02915 IPR019479 Peroxiredoxin, C-terminal NIY05_02915 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant NIY05_02915 IPR024706 Peroxiredoxin, AhpC-type NIY05_02915 IPR022915 Peroxiredoxin, TDXH subfamily NIY05_02920 IPR036670 SecA, preprotein cross-linking domain superfamily NIY05_02920 IPR036266 SecA, Wing/Scaffold superfamily NIY05_02920 IPR011116 SecA Wing/Scaffold NIY05_02920 IPR011130 SecA, preprotein cross-linking domain NIY05_02920 IPR004027 SEC-C motif NIY05_02920 IPR011115 SecA DEAD-like, N-terminal NIY05_02920 IPR020937 SecA conserved site NIY05_02920 IPR000185 Protein translocase subunit SecA NIY05_02920 IPR014018 SecA motor DEAD NIY05_02920 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_02930 IPR005829 Sugar transporter, conserved site NIY05_02930 IPR004736 MFS transporter, metabolite:H symporter NIY05_02930 IPR036259 MFS transporter superfamily NIY05_02930 IPR020846 Major facilitator superfamily domain NIY05_02930 IPR011701 Major facilitator superfamily NIY05_02930 IPR005828 Major facilitator, sugar transporter-like NIY05_02935 IPR005744 Hly-III NIY05_02935 IPR004254 AdipoR/Haemolysin-III-related NIY05_02960 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site NIY05_02960 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding NIY05_02960 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal NIY05_02960 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NIY05_02960 IPR029045 ClpP/crotonase-like domain superfamily NIY05_02960 IPR001753 Enoyl-CoA hydratase/isomerase NIY05_02960 IPR012802 Fatty oxidation complex, alpha subunit FadJ NIY05_02960 IPR036291 NAD(P)-binding domain superfamily NIY05_02965 IPR020615 Thiolase, acyl-enzyme intermediate active site NIY05_02965 IPR016039 Thiolase-like NIY05_02965 IPR002155 Thiolase NIY05_02965 IPR020617 Thiolase, C-terminal NIY05_02965 IPR020613 Thiolase, conserved site NIY05_02965 IPR020616 Thiolase, N-terminal NIY05_02965 IPR020610 Thiolase, active site NIY05_02970 IPR003313 AraC-type arabinose-binding/dimerisation domain NIY05_02970 IPR009057 Homeobox-like domain superfamily NIY05_02970 IPR037923 Transcription regulator HTH-like NIY05_02970 IPR018060 DNA binding HTH domain, AraC-type NIY05_02970 IPR018062 HTH domain AraC-type, conserved site NIY05_02970 IPR020449 Transcription regulator HTH, AraC- type NIY05_02975 IPR003673 CoA-transferase family III NIY05_02975 IPR023606 CoA-transferase family III domain superfamily NIY05_02980 IPR007049 Carbohydrate-selective porin OprB NIY05_02980 IPR038673 Carbohydrate-selective porin OprB superfamily NIY05_02985 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NIY05_02985 IPR017511 PQQ-dependent membrane bound dehydrogenase NIY05_02985 IPR002372 Pyrrolo-quinoline quinone repeat NIY05_02985 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIY05_02985 IPR001479 Quinoprotein dehydrogenase, conserved site NIY05_02990 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site NIY05_02990 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain NIY05_02990 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain NIY05_02990 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily NIY05_03000 IPR000390 Small multidrug resistance protein family NIY05_03010 IPR020610 Thiolase, active site NIY05_03010 IPR020617 Thiolase, C-terminal NIY05_03010 IPR020613 Thiolase, conserved site NIY05_03010 IPR002155 Thiolase NIY05_03010 IPR020616 Thiolase, N-terminal NIY05_03010 IPR016039 Thiolase-like NIY05_03010 IPR020615 Thiolase, acyl-enzyme intermediate active site NIY05_03020 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel NIY05_03020 IPR027385 Outer membrane protein beta-barrel domain NIY05_03020 IPR006664 Outer membrane protein, bacterial NIY05_03020 IPR006665 OmpA-like domain NIY05_03020 IPR036737 OmpA-like domain superfamily NIY05_03030 IPR036025 tRNA-splicing ligase RtcB-like superfamily NIY05_03030 IPR001233 tRNA-splicing ligase, RtcB NIY05_03035 IPR004840 Amino acid permease, conserved site NIY05_03035 IPR004841 Amino acid permease/ SLC12A domain NIY05_03040 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NIY05_03040 IPR007848 Methyltransferase small domain NIY05_03040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_03040 IPR023543 rRNA small subunit methyltransferase C NIY05_03040 IPR013675 Methyltransferase small, N-terminal NIY05_03045 IPR006043 Xanthine/uracil/vitamin C permease NIY05_03045 IPR006042 Xanthine/uracil permease NIY05_03050 IPR035651 BipA, domain V NIY05_03050 IPR000640 Elongation factor EFG, domain V-like NIY05_03050 IPR004161 Translation elongation factor EFTu-like, domain 2 NIY05_03050 IPR031157 Tr-type G domain, conserved site NIY05_03050 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_03050 IPR005225 Small GTP-binding protein domain NIY05_03050 IPR000795 Transcription factor, GTP-binding domain NIY05_03050 IPR009000 Translation protein, beta-barrel domain superfamily NIY05_03050 IPR042116 GTP-binding protein TypA/BipA, C-terminal NIY05_03050 IPR006298 GTP-binding protein TypA NIY05_03050 IPR035647 EF-G domain III/V-like NIY05_03055 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L NIY05_03055 IPR001185 Large-conductance mechanosensitive channel NIY05_03055 IPR019823 Large-conductance mechanosensitive channel, conserved site NIY05_03055 IPR036019 Gated mechanosensitive channel NIY05_03065 IPR027304 Trigger factor/SurA domain superfamily NIY05_03065 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site NIY05_03065 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type NIY05_03065 IPR023059 Foldase protein PrsA NIY05_03070 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding NIY05_03070 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain NIY05_03070 IPR010663 Zinc finger, FPG/IleRS-type NIY05_03070 IPR020629 Formamidopyrimidine-DNA glycosylase NIY05_03070 IPR010979 Ribosomal protein S13-like, H2TH NIY05_03070 IPR035937 MutM-like, N-terminal NIY05_03070 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type NIY05_03075 IPR003180 Methylpurine-DNA glycosylase NIY05_03075 IPR036995 Methylpurine-DNA glycosylase superfamily NIY05_03075 IPR011034 Formyl transferase-like, C-terminal domain superfamily NIY05_03095 IPR013785 Aldolase-type TIM barrel NIY05_03095 IPR023663 NADPH dehydrogenase NIY05_03095 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal NIY05_03110 IPR033954 Disulphide bond isomerase, DsbC/G NIY05_03110 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal NIY05_03110 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily NIY05_03110 IPR012336 Thioredoxin-like fold NIY05_03110 IPR036249 Thioredoxin-like superfamily NIY05_03110 IPR017937 Thioredoxin, conserved site NIY05_03115 IPR017703 YgfZ/GcvT conserved site NIY05_03115 IPR006222 Aminomethyltransferase, folate-binding domain NIY05_03115 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal NIY05_03115 IPR028896 Aminomethyltransferase-like NIY05_03125 IPR007438 Protein of unknown function DUF488 NIY05_03130 IPR004624 PhnA protein NIY05_03130 IPR013987 PhnA protein, N-terminal NIY05_03130 IPR013988 PhnA protein, C-terminal NIY05_03135 IPR036913 YegP-like superfamily NIY05_03135 IPR010879 Domain of unknown function DUF1508 NIY05_03140 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily NIY05_03140 IPR033730 Prokaryote proline-tRNA ligase core domain NIY05_03140 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 NIY05_03140 IPR036621 Anticodon-binding domain superfamily NIY05_03140 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain NIY05_03140 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) NIY05_03140 IPR006195 Aminoacyl-tRNA synthetase, class II NIY05_03140 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type NIY05_03140 IPR002316 Proline-tRNA ligase, class IIa NIY05_03140 IPR004154 Anticodon-binding NIY05_03145 IPR001036 Acriflavin resistance protein NIY05_03145 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIY05_03160 IPR001789 Signal transduction response regulator, receiver domain NIY05_03160 IPR011006 CheY-like superfamily NIY05_03165 IPR001789 Signal transduction response regulator, receiver domain NIY05_03165 IPR011006 CheY-like superfamily NIY05_03170 IPR036061 CheW-like domain superfamily NIY05_03170 IPR002545 CheW-like domain NIY05_03170 IPR039315 Chemotaxis protein CheW NIY05_03175 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain NIY05_03175 IPR003660 HAMP domain NIY05_03175 IPR004090 Chemotaxis methyl-accepting receptor NIY05_03175 IPR029095 NarX-like, N-terminal NIY05_03180 IPR036061 CheW-like domain superfamily NIY05_03180 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_03180 IPR005467 Histidine kinase domain NIY05_03180 IPR036641 HPT domain superfamily NIY05_03180 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NIY05_03180 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain NIY05_03180 IPR001789 Signal transduction response regulator, receiver domain NIY05_03180 IPR002545 CheW-like domain NIY05_03180 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_03180 IPR011006 CheY-like superfamily NIY05_03190 IPR011650 Peptidase M20, dimerisation domain NIY05_03190 IPR002933 Peptidase M20 NIY05_03190 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria NIY05_03190 IPR036264 Bacterial exopeptidase dimerisation domain NIY05_03195 IPR012556 Entericidin A/B NIY05_03205 IPR007401 Protein of unknown function DUF454 NIY05_03210 IPR005490 L,D-transpeptidase catalytic domain NIY05_03210 IPR041597 L,D-transpeptidase C-terminal domain NIY05_03210 IPR038063 L,D-transpeptidase catalytic domain-like NIY05_03250 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain NIY05_03250 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding NIY05_03250 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria NIY05_03250 IPR017927 FAD-binding domain, ferredoxin reductase-type NIY05_03250 IPR001094 Flavodoxin-like NIY05_03250 IPR008254 Flavodoxin/nitric oxide synthase NIY05_03250 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase NIY05_03250 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NIY05_03250 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily NIY05_03250 IPR001433 Oxidoreductase FAD/NAD(P)-binding NIY05_03250 IPR017938 Riboflavin synthase-like beta-barrel NIY05_03250 IPR029039 Flavoprotein-like superfamily NIY05_03260 IPR010019 Integral membrane protein, YccS NIY05_03260 IPR010020 Integral membrane protein, YccS/YhfK NIY05_03260 IPR032692 Integral membrane protein YccS, N-terminal NIY05_03265 IPR004734 Multidrug resistance protein NIY05_03265 IPR036259 MFS transporter superfamily NIY05_03265 IPR020846 Major facilitator superfamily domain NIY05_03265 IPR011701 Major facilitator superfamily NIY05_03265 IPR004812 Drug resistance transporter Bcr/CmlA subfamily NIY05_03270 IPR029479 Nitroreductase NIY05_03270 IPR000415 Nitroreductase-like NIY05_03285 IPR001463 Sodium:alanine symporter NIY05_03290 IPR002641 Patatin-like phospholipase domain NIY05_03290 IPR001423 Lysophospholipase patatin, conserved site NIY05_03290 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase NIY05_03295 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIY05_03295 IPR005789 Threonine dehydratase, catabolic NIY05_03295 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site NIY05_03295 IPR001926 Pyridoxal-phosphate dependent enzyme NIY05_03295 IPR002912 ACT domain NIY05_03300 IPR009248 SbmA/BacA-like NIY05_03300 IPR036640 ABC transporter type 1, transmembrane domain superfamily NIY05_03330 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit NIY05_03330 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E NIY05_03330 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic NIY05_03330 IPR018027 Asn/Gln amidotransferase NIY05_03330 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like NIY05_03330 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 NIY05_03330 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 NIY05_03330 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain NIY05_03330 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site NIY05_03335 IPR023631 Amidase signature domain NIY05_03335 IPR036928 Amidase signature (AS) superfamily NIY05_03335 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit NIY05_03335 IPR000120 Amidase NIY05_03335 IPR020556 Amidase, conserved site NIY05_03340 IPR003837 Glu-tRNAGln amidotransferase C subunit NIY05_03340 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C NIY05_03345 IPR004753 Cell shape determining protein MreB NIY05_03350 IPR007221 Rod shape-determining protein MreC NIY05_03350 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 NIY05_03350 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 NIY05_03355 IPR026034 Cell shape-determining protein MreD, proteobacterial type NIY05_03355 IPR007227 Cell shape-determining protein MreD NIY05_03360 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein NIY05_03360 IPR029001 Inosine triphosphate pyrophosphatase-like NIY05_03365 IPR012340 Nucleic acid-binding, OB-fold NIY05_03365 IPR003029 S1 domain NIY05_03365 IPR022967 RNA-binding domain, S1 NIY05_03365 IPR004659 Ribonuclease E/G NIY05_03365 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G NIY05_03375 IPR009721 O-acyltransferase WSD1, C-terminal NIY05_03375 IPR014292 Acyltransferase, WS/DGAT/MGAT NIY05_03375 IPR004255 O-acyltransferase, WSD1, N-terminal NIY05_03380 IPR011798 Adenosine 5'-phosphosulphate reductase NIY05_03380 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase NIY05_03380 IPR002500 Phosphoadenosine phosphosulphate reductase NIY05_03380 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_03385 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein NIY05_03385 IPR036412 HAD-like superfamily NIY05_03385 IPR023214 HAD superfamily NIY05_03395 IPR029039 Flavoprotein-like superfamily NIY05_03395 IPR003680 Flavodoxin-like fold NIY05_03415 IPR003824 Undecaprenyl-diphosphatase UppP NIY05_03420 IPR009594 Transcription regulator HTH, AraC, N-terminal NIY05_03420 IPR018060 DNA binding HTH domain, AraC-type NIY05_03420 IPR009057 Homeobox-like domain superfamily NIY05_03425 IPR014030 Beta-ketoacyl synthase, N-terminal NIY05_03425 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding NIY05_03425 IPR036291 NAD(P)-binding domain superfamily NIY05_03425 IPR032821 Ketoacyl-synthetase, C-terminal extension NIY05_03425 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain NIY05_03425 IPR001227 Acyl transferase domain superfamily NIY05_03425 IPR042104 Polyketide synthase, dehydratase domain superfamily NIY05_03425 IPR013968 Polyketide synthase, ketoreductase domain NIY05_03425 IPR014031 Beta-ketoacyl synthase, C-terminal NIY05_03425 IPR020806 Polyketide synthase, phosphopantetheine-binding domain NIY05_03425 IPR015083 Polyketide synthase, docking domain NIY05_03425 IPR009081 Phosphopantetheine binding ACP domain NIY05_03425 IPR006162 Phosphopantetheine attachment site NIY05_03425 IPR016039 Thiolase-like NIY05_03425 IPR020843 Polyketide synthase, enoylreductase domain NIY05_03425 IPR018201 Beta-ketoacyl synthase, active site NIY05_03425 IPR020807 Polyketide synthase, dehydratase domain NIY05_03425 IPR013154 Alcohol dehydrogenase, N-terminal NIY05_03425 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase NIY05_03425 IPR014043 Acyl transferase NIY05_03425 IPR036347 Erythronolide synthase, docking domain superfamily NIY05_03425 IPR015357 Erythronolide synthase, docking NIY05_03425 IPR036736 ACP-like superfamily NIY05_03425 IPR011032 GroES-like superfamily NIY05_03430 IPR029062 Class I glutamine amidotransferase-like NIY05_03430 IPR017283 Protein/nucleic acid deglycase HchA NIY05_03430 IPR002818 DJ-1/PfpI NIY05_03440 IPR004840 Amino acid permease, conserved site NIY05_03440 IPR004841 Amino acid permease/ SLC12A domain NIY05_03445 IPR012709 2-methyl-aconitate isomerase PrpF NIY05_03445 IPR007400 PrpF protein NIY05_03450 IPR000092 Polyprenyl synthetase NIY05_03450 IPR008949 Isoprenoid synthase domain superfamily NIY05_03450 IPR033749 Polyprenyl synthetase, conserved site NIY05_03455 IPR007351 Uncharacterised protein YjbR NIY05_03455 IPR038056 YjbR-like superfamily NIY05_03460 IPR001107 Band 7 domain NIY05_03460 IPR018080 Band 7/stomatin-like, conserved site NIY05_03460 IPR036013 Band 7/SPFH domain superfamily NIY05_03460 IPR001972 Stomatin family NIY05_03470 IPR002641 Patatin-like phospholipase domain NIY05_03470 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase NIY05_03470 IPR001423 Lysophospholipase patatin, conserved site NIY05_03490 IPR040423 Phosphoethanolamine transferase NIY05_03490 IPR012549 Phosphoethanolamine transferase, N-terminal NIY05_03490 IPR017850 Alkaline-phosphatase-like, core domain superfamily NIY05_03490 IPR000917 Sulfatase, N-terminal NIY05_03495 IPR039420 Transcriptional regulatory protein WalR-like NIY05_03495 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_03495 IPR001789 Signal transduction response regulator, receiver domain NIY05_03495 IPR001867 OmpR/PhoB-type DNA-binding domain NIY05_03495 IPR011006 CheY-like superfamily NIY05_03500 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NIY05_03500 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NIY05_03500 IPR003660 HAMP domain NIY05_03500 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_03500 IPR005467 Histidine kinase domain NIY05_03500 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_03500 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NIY05_03500 IPR013727 Two-component sensor kinase, N-terminal NIY05_03510 IPR001905 Ammonium transporter NIY05_03510 IPR018047 Ammonium transporter, conserved site NIY05_03510 IPR024041 Ammonium transporter AmtB-like domain NIY05_03510 IPR029020 Ammonium/urea transporter NIY05_03515 IPR036390 Winged helix DNA-binding domain superfamily NIY05_03515 IPR005119 LysR, substrate-binding NIY05_03515 IPR000847 Transcription regulator HTH, LysR NIY05_03515 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_03535 IPR002300 Aminoacyl-tRNA synthetase, class Ia NIY05_03535 IPR033705 Valyl tRNA synthetase, anticodon-binding domain NIY05_03535 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding NIY05_03535 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_03535 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm NIY05_03535 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding NIY05_03535 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily NIY05_03535 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NIY05_03535 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain NIY05_03535 IPR002303 Valine-tRNA ligase NIY05_03535 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm NIY05_03545 IPR036291 NAD(P)-binding domain superfamily NIY05_03545 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase NIY05_03545 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_03545 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_03555 IPR035439 UPF0145 domain superfamily NIY05_03555 IPR002765 Uncharacterised protein family UPF0145 NIY05_03560 IPR002765 Uncharacterised protein family UPF0145 NIY05_03560 IPR035439 UPF0145 domain superfamily NIY05_03565 IPR003423 Outer membrane efflux protein NIY05_03565 IPR010131 RND efflux system, outer membrane lipoprotein, NodT NIY05_03570 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIY05_03570 IPR001036 Acriflavin resistance protein NIY05_03570 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 NIY05_03575 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIY05_03575 IPR006143 RND efflux pump, membrane fusion protein NIY05_03580 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily NIY05_03580 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIY05_03590 IPR033749 Polyprenyl synthetase, conserved site NIY05_03590 IPR000092 Polyprenyl synthetase NIY05_03590 IPR008949 Isoprenoid synthase domain superfamily NIY05_03600 IPR018258 Ribosomal protein L21, conserved site NIY05_03600 IPR036164 L21-like superfamily NIY05_03600 IPR028909 Ribosomal protein L21-like NIY05_03600 IPR001787 Ribosomal protein L21 NIY05_03605 IPR001684 Ribosomal protein L27 NIY05_03605 IPR018261 Ribosomal protein L27, conserved site NIY05_03610 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria NIY05_03610 IPR004564 Outer membrane lipoprotein carrier protein LolA-like NIY05_03610 IPR029046 Lipoprotein localisation LolA/LolB/LppX NIY05_03620 IPR015866 Serine-tRNA synthetase, type1, N-terminal NIY05_03620 IPR033729 Serine-tRNA ligase catalytic core domain NIY05_03620 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm NIY05_03620 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily NIY05_03620 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) NIY05_03620 IPR006195 Aminoacyl-tRNA synthetase, class II NIY05_03620 IPR002317 Serine-tRNA ligase, type1 NIY05_03625 IPR014777 Tetrapyrrole methylase, subdomain 1 NIY05_03625 IPR014776 Tetrapyrrole methylase, subdomain 2 NIY05_03625 IPR006366 Uroporphyrin-III C-methyltransferase NIY05_03625 IPR036291 NAD(P)-binding domain superfamily NIY05_03625 IPR037115 Sirohaem synthase, dimerisation domain superfamily NIY05_03625 IPR012409 Sirohaem synthase NIY05_03625 IPR028281 Siroheme synthase, central domain NIY05_03625 IPR019478 Sirohaem synthase, dimerisation domain NIY05_03625 IPR035996 Tetrapyrrole methylase superfamily NIY05_03625 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site NIY05_03625 IPR000878 Tetrapyrrole methylase NIY05_03625 IPR006367 Sirohaem synthase, N-terminal NIY05_03630 IPR029028 Alpha/beta knot methyltransferases NIY05_03630 IPR001537 tRNA/rRNA methyltransferase, SpoU type NIY05_03630 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase NIY05_03630 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NIY05_03635 IPR002577 Helix-turn-helix, HxlR type NIY05_03635 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_03635 IPR036390 Winged helix DNA-binding domain superfamily NIY05_03640 IPR008254 Flavodoxin/nitric oxide synthase NIY05_03640 IPR005025 NADPH-dependent FMN reductase-like NIY05_03640 IPR029039 Flavoprotein-like superfamily NIY05_03645 IPR002293 Amino acid/polyamine transporter I NIY05_03650 IPR039697 Iron-type alcohol dehydrogenase-like NIY05_03650 IPR018211 Alcohol dehydrogenase, iron-type, conserved site NIY05_03650 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA NIY05_03660 IPR020605 Octanoyltransferase, conserved site NIY05_03660 IPR000544 Octanoyltransferase NIY05_03660 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain NIY05_03665 IPR027471 YbeD-like domain superfamily NIY05_03665 IPR007454 Uncharacterised protein family UPF0250 NIY05_03670 IPR007630 RNA polymerase sigma-70 region 4 NIY05_03670 IPR028630 RNA polymerase sigma factor RpoD NIY05_03670 IPR012760 RNA polymerase sigma factor RpoD, C-terminal NIY05_03670 IPR013324 RNA polymerase sigma factor, region 3/4-like NIY05_03670 IPR013325 RNA polymerase sigma factor, region 2 NIY05_03670 IPR042189 Sigma-70 factor, region 1.1 superfamily NIY05_03670 IPR007127 RNA polymerase sigma factor 70, region 1.1 NIY05_03670 IPR007631 RNA polymerase sigma factor 70, non-essential domain NIY05_03670 IPR007624 RNA polymerase sigma-70 region 3 NIY05_03670 IPR007627 RNA polymerase sigma-70 region 2 NIY05_03670 IPR009042 RNA polymerase sigma-70 region 1.2 NIY05_03670 IPR000943 RNA polymerase sigma-70 NIY05_03670 IPR014284 RNA polymerase sigma-70 like domain NIY05_03670 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_03690 IPR040503 UPF0176, acylphosphatase-like domain NIY05_03690 IPR020936 Uncharacterised protein family UPF0176 NIY05_03690 IPR036873 Rhodanese-like domain superfamily NIY05_03690 IPR001763 Rhodanese-like domain NIY05_03700 IPR016143 Citrate synthase-like, small alpha subdomain NIY05_03700 IPR019810 Citrate synthase active site NIY05_03700 IPR024176 Citrate synthase, bacterial-type NIY05_03700 IPR036969 Citrate synthase superfamily NIY05_03700 IPR010953 Citrate synthase, type I NIY05_03700 IPR016142 Citrate synthase-like, large alpha subdomain NIY05_03700 IPR002020 Citrate synthase NIY05_03705 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit NIY05_03705 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site NIY05_03705 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit NIY05_03705 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit NIY05_03710 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor NIY05_03710 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit NIY05_03710 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit NIY05_03715 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain NIY05_03715 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit NIY05_03715 IPR011281 Succinate dehydrogenase, flavoprotein subunit NIY05_03715 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily NIY05_03715 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal NIY05_03715 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site NIY05_03715 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily NIY05_03715 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_03720 IPR036010 2Fe-2S ferredoxin-like superfamily NIY05_03720 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein NIY05_03720 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal NIY05_03720 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NIY05_03720 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIY05_03720 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIY05_03720 IPR012675 Beta-grasp domain superfamily NIY05_03720 IPR009051 Alpha-helical ferredoxin NIY05_03735 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain NIY05_03735 IPR011603 2-oxoglutarate dehydrogenase E1 component NIY05_03735 IPR001017 Dehydrogenase, E1 component NIY05_03735 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal NIY05_03735 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily NIY05_03735 IPR029061 Thiamin diphosphate-binding fold NIY05_03735 IPR005475 Transketolase-like, pyrimidine-binding domain NIY05_03740 IPR000089 Biotin/lipoyl attachment NIY05_03740 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NIY05_03740 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily NIY05_03740 IPR006255 Dihydrolipoamide succinyltransferase NIY05_03740 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain NIY05_03740 IPR004167 Peripheral subunit-binding domain NIY05_03740 IPR036625 E3-binding domain superfamily NIY05_03740 IPR011053 Single hybrid motif NIY05_03745 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_03745 IPR023753 FAD/NAD(P)-binding domain NIY05_03745 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIY05_03745 IPR006258 Dihydrolipoamide dehydrogenase NIY05_03745 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I NIY05_03745 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site NIY05_03745 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily NIY05_03750 IPR005809 Succinate--CoA synthetase, beta subunit NIY05_03750 IPR011761 ATP-grasp fold NIY05_03750 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type NIY05_03750 IPR013815 ATP-grasp fold, subdomain 1 NIY05_03750 IPR005811 ATP-citrate lyase/succinyl-CoA ligase NIY05_03750 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site NIY05_03750 IPR016102 Succinyl-CoA synthetase-like NIY05_03755 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site NIY05_03755 IPR016102 Succinyl-CoA synthetase-like NIY05_03755 IPR003781 CoA-binding NIY05_03755 IPR005810 Succinyl-CoA ligase, alpha subunit NIY05_03755 IPR005811 ATP-citrate lyase/succinyl-CoA ligase NIY05_03755 IPR036291 NAD(P)-binding domain superfamily NIY05_03755 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site NIY05_03760 IPR024109 Tryptophan-tRNA ligase, bacterial-type NIY05_03760 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NIY05_03760 IPR002305 Aminoacyl-tRNA synthetase, class Ic NIY05_03760 IPR002306 Tryptophan-tRNA ligase NIY05_03760 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_03765 IPR008526 Inner membrane protein YedI NIY05_03770 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative NIY05_03775 IPR006153 Cation/H+ exchanger NIY05_03775 IPR018422 Cation/H+ exchanger, CPA1 family NIY05_03775 IPR038770 Sodium/solute symporter superfamily NIY05_03790 IPR029052 Metallo-dependent phosphatase-like NIY05_03790 IPR019079 Capsule synthesis protein, CapA NIY05_03800 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_03800 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain NIY05_03800 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding NIY05_03805 IPR006016 UspA NIY05_03805 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_03805 IPR006015 Universal stress protein A family NIY05_03810 IPR001451 Hexapeptide repeat NIY05_03810 IPR018357 Hexapeptide transferase, conserved site NIY05_03810 IPR011004 Trimeric LpxA-like superfamily NIY05_03815 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily NIY05_03815 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily NIY05_03815 IPR018151 Transcription elongation factor, GreA/GreB, conserved site NIY05_03815 IPR028624 Transcription elongation factor GreA/GreB NIY05_03815 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal NIY05_03815 IPR023459 Transcription elongation factor GreA/GreB family NIY05_03815 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal NIY05_03815 IPR006359 Transcription elongation factor GreA NIY05_03820 IPR016185 Pre-ATP-grasp domain superfamily NIY05_03820 IPR011761 ATP-grasp fold NIY05_03820 IPR006275 Carbamoyl-phosphate synthase, large subunit NIY05_03820 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain NIY05_03820 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily NIY05_03820 IPR011607 Methylglyoxal synthase-like domain NIY05_03820 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain NIY05_03820 IPR036914 Methylglyoxal synthase-like domain superfamily NIY05_03820 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain NIY05_03820 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain NIY05_03825 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain NIY05_03825 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily NIY05_03825 IPR029062 Class I glutamine amidotransferase-like NIY05_03825 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain NIY05_03825 IPR017926 Glutamine amidotransferase NIY05_03825 IPR006274 Carbamoyl-phosphate synthase, small subunit NIY05_03840 IPR017924 RNA-binding protein YhbY NIY05_03840 IPR001890 RNA-binding, CRM domain NIY05_03840 IPR035920 YhbY-like superfamily NIY05_03845 IPR015507 Ribosomal RNA large subunit methyltransferase E NIY05_03845 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_03845 IPR002877 Ribosomal RNA methyltransferase FtsJ domain NIY05_03850 IPR003593 AAA+ ATPase domain NIY05_03850 IPR041569 AAA ATPase, AAA+ lid domain NIY05_03850 IPR003959 ATPase, AAA-type, core NIY05_03850 IPR003960 ATPase, AAA-type, conserved site NIY05_03850 IPR005936 Peptidase, FtsH NIY05_03850 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_03850 IPR011546 Peptidase M41, FtsH extracellular NIY05_03850 IPR000642 Peptidase M41 NIY05_03850 IPR037219 Peptidase M41-like NIY05_03855 IPR000489 Pterin-binding domain NIY05_03855 IPR006390 Dihydropteroate synthase NIY05_03855 IPR011005 Dihydropteroate synthase-like NIY05_03875 IPR032093 Phospholipase D, N-terminal NIY05_03875 IPR008963 Purple acid phosphatase-like, N-terminal NIY05_03875 IPR006311 Twin-arginine translocation pathway, signal sequence NIY05_03875 IPR018946 Alkaline phosphatase D-related NIY05_03875 IPR038607 PhoD-like superfamily NIY05_03890 IPR036291 NAD(P)-binding domain superfamily NIY05_03890 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase NIY05_03890 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NIY05_03890 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site NIY05_03890 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NIY05_03895 IPR004498 Ribosomal protein L11 methyltransferase NIY05_03895 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_03905 IPR020846 Major facilitator superfamily domain NIY05_03905 IPR036259 MFS transporter superfamily NIY05_03905 IPR004736 MFS transporter, metabolite:H symporter NIY05_03905 IPR005829 Sugar transporter, conserved site NIY05_03905 IPR005828 Major facilitator, sugar transporter-like NIY05_03910 IPR005999 Glycerol kinase NIY05_03910 IPR000577 Carbohydrate kinase, FGGY NIY05_03910 IPR018485 Carbohydrate kinase, FGGY, C-terminal NIY05_03910 IPR018483 Carbohydrate kinase, FGGY, conserved site NIY05_03910 IPR018484 Carbohydrate kinase, FGGY, N-terminal NIY05_03915 IPR031656 Alpha-glycerophosphate oxidase, C-terminal NIY05_03915 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily NIY05_03915 IPR006076 FAD dependent oxidoreductase NIY05_03915 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_03915 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase NIY05_03920 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain NIY05_03920 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal NIY05_03920 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site NIY05_03920 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal NIY05_03920 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising NIY05_03920 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal NIY05_03925 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily NIY05_03925 IPR001206 Diacylglycerol kinase, catalytic domain NIY05_03925 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal NIY05_03930 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type NIY05_03930 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA NIY05_03930 IPR042281 GpdQ, beta-strand dimerisation domain NIY05_03930 IPR042283 GpdQ, catalytic alpha/beta sandwich domain NIY05_03940 IPR020818 GroES chaperonin family NIY05_03940 IPR037124 GroES chaperonin superfamily NIY05_03940 IPR018369 Chaperonin GroES, conserved site NIY05_03940 IPR011032 GroES-like superfamily NIY05_03945 IPR027409 GroEL-like apical domain superfamily NIY05_03945 IPR027413 GroEL-like equatorial domain superfamily NIY05_03945 IPR027410 TCP-1-like chaperonin intermediate domain superfamily NIY05_03945 IPR002423 Chaperonin Cpn60/TCP-1 family NIY05_03945 IPR018370 Chaperonin Cpn60, conserved site NIY05_03945 IPR001844 Chaperonin Cpn60 NIY05_03950 IPR000829 DAGK family NIY05_03950 IPR033718 Diacylglycerol kinase, prokaryotic NIY05_03950 IPR036945 Diacylglycerol kinase (DAGK) superfamily NIY05_03960 IPR030395 Glycerophosphodiester phosphodiesterase domain NIY05_03960 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily NIY05_03965 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 NIY05_03965 IPR001036 Acriflavin resistance protein NIY05_03965 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIY05_03975 IPR022919 Peptidase M48, protease HtpX, putative NIY05_03975 IPR001915 Peptidase M48 NIY05_03980 IPR000189 Prokaryotic transglycosylase, active site NIY05_03980 IPR008258 Transglycosylase SLT domain 1 NIY05_03980 IPR023346 Lysozyme-like domain superfamily NIY05_03985 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_03985 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal NIY05_03985 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase NIY05_03985 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type NIY05_03995 IPR023346 Lysozyme-like domain superfamily NIY05_03995 IPR023703 Membrane-bound lytic murein transglycosylase F NIY05_03995 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NIY05_03995 IPR000189 Prokaryotic transglycosylase, active site NIY05_03995 IPR008258 Transglycosylase SLT domain 1 NIY05_04000 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily NIY05_04000 IPR018151 Transcription elongation factor, GreA/GreB, conserved site NIY05_04000 IPR023459 Transcription elongation factor GreA/GreB family NIY05_04000 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal NIY05_04000 IPR006358 Transcription elongation factor GreB NIY05_04000 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily NIY05_04000 IPR028624 Transcription elongation factor GreA/GreB NIY05_04000 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal NIY05_04015 IPR001031 Thioesterase NIY05_04015 IPR009081 Phosphopantetheine binding ACP domain NIY05_04015 IPR020802 Polyketide synthase, thioesterase domain NIY05_04015 IPR001242 Condensation domain NIY05_04015 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily NIY05_04015 IPR042099 AMP-dependent synthetase-like superfamily NIY05_04015 IPR020806 Polyketide synthase, phosphopantetheine-binding domain NIY05_04015 IPR020845 AMP-binding, conserved site NIY05_04015 IPR025110 AMP-binding enzyme, C-terminal domain NIY05_04015 IPR036736 ACP-like superfamily NIY05_04015 IPR029058 Alpha/Beta hydrolase fold NIY05_04015 IPR010071 Amino acid adenylation domain NIY05_04015 IPR000873 AMP-dependent synthetase/ligase NIY05_04045 IPR029479 Nitroreductase NIY05_04045 IPR000415 Nitroreductase-like NIY05_04050 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase NIY05_04050 IPR036291 NAD(P)-binding domain superfamily NIY05_04050 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_04050 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_04060 IPR036129 Glycerate kinase superfamily NIY05_04060 IPR018197 Glycerate kinase, restriction-enzyme-like fold NIY05_04060 IPR018193 Glycerate kinase, flavodoxin-like fold NIY05_04060 IPR004381 Glycerate kinase NIY05_04065 IPR009010 Aspartate decarboxylase-like domain superfamily NIY05_04065 IPR037951 YdeP-like, MopB domain NIY05_04065 IPR006656 Molybdopterin oxidoreductase NIY05_04065 IPR010046 Oxidoreductase alpha (molybdopterin) subunit NIY05_04065 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain NIY05_04070 IPR016193 Cytidine deaminase-like NIY05_04070 IPR003786 Sulfur carrier protein FdhD NIY05_04075 IPR010652 Domain of unknown function DUF1232 NIY05_04080 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain NIY05_04080 IPR020921 Erythronate-4-phosphate dehydrogenase NIY05_04080 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain NIY05_04080 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 NIY05_04080 IPR036291 NAD(P)-binding domain superfamily NIY05_04080 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NIY05_04080 IPR038251 PdxB, dimerisation domain superfamily NIY05_04085 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) NIY05_04085 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal NIY05_04085 IPR006195 Aminoacyl-tRNA synthetase, class II NIY05_04085 IPR004525 Elongation factor P--(R)-beta-lysine ligase NIY05_04095 IPR003593 AAA+ ATPase domain NIY05_04095 IPR004504 DNA repair protein RadA NIY05_04095 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_04095 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain NIY05_04095 IPR041166 LapB, rubredoxin metal binding domain NIY05_04095 IPR020568 Ribosomal protein S5 domain 2-type fold NIY05_04095 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIY05_04100 IPR004840 Amino acid permease, conserved site NIY05_04100 IPR004841 Amino acid permease/ SLC12A domain NIY05_04110 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal NIY05_04110 IPR002986 Diaminopimelate decarboxylase, LysA NIY05_04110 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal NIY05_04110 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site NIY05_04110 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal NIY05_04110 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site NIY05_04110 IPR000183 Ornithine/DAP/Arg decarboxylase NIY05_04110 IPR029066 PLP-binding barrel NIY05_04115 IPR018510 Diaminopimelate epimerase, active site NIY05_04115 IPR001653 Diaminopimelate epimerase, DapF NIY05_04120 IPR004778 Homoserine/Threonine efflux protein NIY05_04120 IPR001123 Amino acid exporter protein, LeuE-type NIY05_04125 IPR023009 Tyrosine recombinase XerC/XerD NIY05_04125 IPR011010 DNA breaking-rejoining enzyme, catalytic core NIY05_04125 IPR002104 Integrase, catalytic domain NIY05_04125 IPR011931 Tyrosine recombinase XerC NIY05_04125 IPR010998 Integrase/recombinase, N-terminal NIY05_04125 IPR004107 Integrase, SAM-like, N-terminal NIY05_04125 IPR013762 Integrase-like, catalytic domain superfamily NIY05_04130 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal NIY05_04130 IPR012255 Electron transfer flavoprotein, beta subunit NIY05_04130 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal NIY05_04130 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_04130 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site NIY05_04135 IPR029035 DHS-like NAD/FAD-binding domain superfamily NIY05_04135 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal NIY05_04135 IPR001308 Electron transfer flavoprotein alpha subunit/FixB NIY05_04135 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal NIY05_04135 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal NIY05_04135 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site NIY05_04135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_04140 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta NIY05_04140 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily NIY05_04140 IPR013760 DNA topoisomerase, type IIA-like domain superfamily NIY05_04140 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal NIY05_04140 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat NIY05_04140 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal NIY05_04140 IPR005743 DNA gyrase, subunit A NIY05_04155 IPR001173 Glycosyltransferase 2-like NIY05_04155 IPR029044 Nucleotide-diphospho-sugar transferases NIY05_04175 IPR039562 Membrane fusion protein, biotin-lipoyl like domain NIY05_04185 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_04185 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_04185 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_04185 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site NIY05_04185 IPR022278 Phosphoserine aminotransferase NIY05_04185 IPR000192 Aminotransferase class V domain NIY05_04200 IPR003791 Protein of unknown function UPF0178 NIY05_04210 IPR003838 ABC transporter permease protein domain NIY05_04210 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E NIY05_04210 IPR025857 MacB-like periplasmic core domain NIY05_04215 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_04215 IPR015854 ABC transporter, lipoprotein release, LolD NIY05_04215 IPR003439 ABC transporter-like NIY05_04215 IPR017871 ABC transporter, conserved site NIY05_04215 IPR003593 AAA+ ATPase domain NIY05_04220 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NIY05_04220 IPR001279 Metallo-beta-lactamase NIY05_04220 IPR025405 Domain of unknown function DUF4131 NIY05_04220 IPR004477 ComEC/Rec2-related protein NIY05_04220 IPR035681 ComA-like, MBL domain NIY05_04220 IPR004797 Competence protein ComEC/Rec2 NIY05_04230 IPR029045 ClpP/crotonase-like domain superfamily NIY05_04230 IPR004670 Na+/H+ antiporter NhaA NIY05_04230 IPR002142 Peptidase S49 NIY05_04230 IPR023171 Na/H antiporter domain superfamily NIY05_04235 IPR029058 Alpha/Beta hydrolase fold NIY05_04235 IPR000073 Alpha/beta hydrolase fold-1 NIY05_04240 IPR002376 Formyl transferase, N-terminal NIY05_04240 IPR004607 Phosphoribosylglycinamide formyltransferase NIY05_04240 IPR001555 Phosphoribosylglycinamide formyltransferase, active site NIY05_04240 IPR036477 Formyl transferase, N-terminal domain superfamily NIY05_04245 IPR036921 PurM-like, N-terminal domain superfamily NIY05_04245 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase NIY05_04245 IPR010918 PurM-like, C-terminal domain NIY05_04245 IPR036676 PurM-like, C-terminal domain superfamily NIY05_04245 IPR016188 PurM-like, N-terminal domain NIY05_04250 IPR002549 Transmembrane protein TqsA-like NIY05_04255 IPR018312 Chromosomal replication control, initiator DnaA, conserved site NIY05_04255 IPR013317 Chromosomal replication initiator protein DnaA NIY05_04255 IPR013159 Chromosomal replication initiator, DnaA C-terminal NIY05_04255 IPR024633 DnaA N-terminal domain NIY05_04255 IPR001957 Chromosomal replication control, initiator DnaA NIY05_04255 IPR003593 AAA+ ATPase domain NIY05_04255 IPR020591 Chromosomal replication control, initiator DnaA-like NIY05_04255 IPR038454 DnaA, N-terminal domain superfamily NIY05_04255 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_04255 IPR010921 Trp repressor/replication initiator NIY05_04285 IPR029028 Alpha/beta knot methyltransferases NIY05_04285 IPR029064 50S ribosomal protein L30e-like NIY05_04285 IPR001537 tRNA/rRNA methyltransferase, SpoU type NIY05_04285 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NIY05_04285 IPR013123 RNA 2-O ribose methyltransferase, substrate binding NIY05_04290 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal NIY05_04290 IPR028343 Fructose-1,6-bisphosphatase NIY05_04290 IPR000146 Fructose-1,6-bisphosphatase class 1 NIY05_04300 IPR036737 OmpA-like domain superfamily NIY05_04300 IPR039001 Peptidoglycan-associated lipoprotein NIY05_04300 IPR006664 Outer membrane protein, bacterial NIY05_04300 IPR006690 Outer membrane protein, OmpA-like, conserved site NIY05_04300 IPR006665 OmpA-like domain NIY05_04300 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal NIY05_04305 IPR036752 TolB, N-terminal domain superfamily NIY05_04305 IPR014167 Tol-Pal system protein TolB NIY05_04305 IPR011659 WD40-like Beta Propeller NIY05_04305 IPR011042 Six-bladed beta-propeller, TolB-like NIY05_04305 IPR007195 TolB, N-terminal NIY05_04315 IPR014168 Tol-Pal system protein TolR NIY05_04315 IPR003400 Biopolymer transport protein ExbD/TolR NIY05_04320 IPR014163 Tol-Pal system, TolQ NIY05_04320 IPR002898 MotA/TolQ/ExbB proton channel NIY05_04325 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site NIY05_04325 IPR029069 HotDog domain superfamily NIY05_04325 IPR006683 Thioesterase domain NIY05_04325 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase NIY05_04325 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family NIY05_04330 IPR017439 Amidohydrolase NIY05_04330 IPR011650 Peptidase M20, dimerisation domain NIY05_04330 IPR002933 Peptidase M20 NIY05_04330 IPR036264 Bacterial exopeptidase dimerisation domain NIY05_04335 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_04335 IPR008824 RuvB-like P-loop domain NIY05_04335 IPR004605 DNA helicase, Holliday junction RuvB-type NIY05_04335 IPR036390 Winged helix DNA-binding domain superfamily NIY05_04335 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_04335 IPR003593 AAA+ ATPase domain NIY05_04335 IPR041445 RuvB, AAA lid domain NIY05_04335 IPR008823 RuvB C-terminal winged helix domain NIY05_04340 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial NIY05_04340 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 NIY05_04340 IPR011114 Holliday junction DNA helicase RuvA, C-terminal NIY05_04340 IPR036267 RuvA, C-terminal domain superfamily NIY05_04340 IPR000085 Bacterial DNA recombination protein RuvA NIY05_04340 IPR010994 RuvA domain 2-like NIY05_04340 IPR012340 Nucleic acid-binding, OB-fold NIY05_04345 IPR003607 HD/PDEase domain NIY05_04345 IPR006674 HD domain NIY05_04345 IPR006261 dNTP triphosphohydrolase NIY05_04345 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal NIY05_04345 IPR023024 dNTP triphosphohydrolase, type 3 NIY05_04345 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily NIY05_04350 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily NIY05_04350 IPR036921 PurM-like, N-terminal domain superfamily NIY05_04350 IPR010918 PurM-like, C-terminal domain NIY05_04350 IPR036676 PurM-like, C-terminal domain superfamily NIY05_04350 IPR017926 Glutamine amidotransferase NIY05_04350 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal NIY05_04350 IPR029062 Class I glutamine amidotransferase-like NIY05_04350 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain NIY05_04350 IPR010073 Phosphoribosylformylglycinamidine synthase PurL NIY05_04355 IPR004812 Drug resistance transporter Bcr/CmlA subfamily NIY05_04355 IPR011701 Major facilitator superfamily NIY05_04355 IPR020846 Major facilitator superfamily domain NIY05_04355 IPR036259 MFS transporter superfamily NIY05_04365 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily NIY05_04365 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal NIY05_04365 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria NIY05_04365 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 NIY05_04370 IPR001753 Enoyl-CoA hydratase/isomerase NIY05_04370 IPR029045 ClpP/crotonase-like domain superfamily NIY05_04370 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB NIY05_04370 IPR014748 Enoyl-CoA hydratase, C-terminal NIY05_04375 IPR015797 NUDIX hydrolase-like domain superfamily NIY05_04375 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain NIY05_04375 IPR004821 Cytidyltransferase-like domain NIY05_04375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_04375 IPR020084 NUDIX hydrolase, conserved site NIY05_04375 IPR000086 NUDIX hydrolase domain NIY05_04385 IPR036249 Thioredoxin-like superfamily NIY05_04385 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant NIY05_04385 IPR013766 Thioredoxin domain NIY05_04400 IPR018317 Queuosine biosynthesis protein QueC NIY05_04400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_04405 IPR007197 Radical SAM NIY05_04405 IPR013785 Aldolase-type TIM barrel NIY05_04405 IPR024924 7-carboxy-7-deazaguanine synthase-like NIY05_04410 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family NIY05_04410 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 NIY05_04410 IPR001451 Hexapeptide repeat NIY05_04410 IPR011004 Trimeric LpxA-like superfamily NIY05_04410 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily NIY05_04410 IPR018357 Hexapeptide transferase, conserved site NIY05_04420 IPR036390 Winged helix DNA-binding domain superfamily NIY05_04420 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_04420 IPR000847 Transcription regulator HTH, LysR NIY05_04420 IPR005119 LysR, substrate-binding NIY05_04420 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain NIY05_04425 IPR003593 AAA+ ATPase domain NIY05_04425 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal NIY05_04425 IPR008995 Molybdate/tungstate binding, C-terminal NIY05_04425 IPR005666 Sulphate transport system permease protein 1 NIY05_04425 IPR024765 TOBE-like domain NIY05_04425 IPR017871 ABC transporter, conserved site NIY05_04425 IPR003439 ABC transporter-like NIY05_04425 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_04430 IPR011866 Sulphate ABC transporter, permease protein CysW NIY05_04430 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_04430 IPR035906 MetI-like superfamily NIY05_04430 IPR005667 Sulphate ABC transporter permease protein 2 NIY05_04435 IPR011865 Sulphate ABC transporter, permease protein CysT NIY05_04435 IPR005667 Sulphate ABC transporter permease protein 2 NIY05_04435 IPR035906 MetI-like superfamily NIY05_04435 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_04445 IPR000957 Sulphate/thiosulphate-binding, conserved site NIY05_04445 IPR034408 Sulphate/thiosulphate-binding site NIY05_04445 IPR005669 Thiosulphate/Sulfate-binding protein NIY05_04450 IPR017824 Aminodeoxychorismate lyase, class IV NIY05_04450 IPR001544 Aminotransferase class IV NIY05_04450 IPR018300 Aminotransferase, class IV, conserved site NIY05_04450 IPR036038 Aminotransferase-like, PLP-dependent enzymes NIY05_04455 IPR003770 Endolytic murein transglycosylase NIY05_04460 IPR018094 Thymidylate kinase NIY05_04460 IPR039430 Thymidylate kinase-like domain NIY05_04460 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_04470 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain NIY05_04470 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily NIY05_04470 IPR005288 L-aspartate oxidase NIY05_04470 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal NIY05_04470 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily NIY05_04470 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_04475 IPR011782 Peptidase S1C, Do NIY05_04475 IPR001940 Peptidase S1C NIY05_04475 IPR009003 Peptidase S1, PA clan NIY05_04475 IPR036034 PDZ superfamily NIY05_04475 IPR001478 PDZ domain NIY05_04485 IPR031157 Tr-type G domain, conserved site NIY05_04485 IPR000795 Transcription factor, GTP-binding domain NIY05_04485 IPR005225 Small GTP-binding protein domain NIY05_04485 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_04485 IPR004161 Translation elongation factor EFTu-like, domain 2 NIY05_04485 IPR013842 GTP-binding protein LepA, C-terminal NIY05_04485 IPR038363 LepA, C-terminal domain superfamily NIY05_04485 IPR006297 Elongation factor 4 NIY05_04485 IPR035647 EF-G domain III/V-like NIY05_04485 IPR000640 Elongation factor EFG, domain V-like NIY05_04485 IPR035654 Elongation factor 4, domain IV NIY05_04490 IPR019533 Peptidase S26 NIY05_04490 IPR019756 Peptidase S26A, signal peptidase I, serine active site NIY05_04490 IPR036286 LexA/Signal peptidase-like superfamily NIY05_04490 IPR019758 Peptidase S26A, signal peptidase I, conserved site NIY05_04490 IPR000223 Peptidase S26A, signal peptidase I NIY05_04490 IPR019757 Peptidase S26A, signal peptidase I, lysine active site NIY05_04500 IPR014720 Double-stranded RNA-binding domain NIY05_04500 IPR000999 Ribonuclease III domain NIY05_04500 IPR036389 Ribonuclease III, endonuclease domain superfamily NIY05_04500 IPR011907 Ribonuclease III NIY05_04505 IPR030388 Era-type guanine nucleotide-binding (G) domain NIY05_04505 IPR005662 GTP-binding protein Era NIY05_04505 IPR006073 GTP binding domain NIY05_04505 IPR015946 K homology domain-like, alpha/beta NIY05_04505 IPR004044 K Homology domain, type 2 NIY05_04505 IPR009019 K homology domain superfamily, prokaryotic type NIY05_04505 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_04505 IPR005225 Small GTP-binding protein domain NIY05_04515 IPR037278 ARFGAP/RecO-like zinc finger NIY05_04515 IPR022572 DNA replication/recombination mediator RecO, N-terminal NIY05_04515 IPR012340 Nucleic acid-binding, OB-fold NIY05_04515 IPR003717 Recombination protein O, RecO NIY05_04520 IPR013785 Aldolase-type TIM barrel NIY05_04520 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ NIY05_04520 IPR036130 Pyridoxine 5'-phosphate synthase NIY05_04525 IPR009078 Ferritin-like superfamily NIY05_04525 IPR012347 Ferritin-like NIY05_04525 IPR010386 tRNA-hydroxylase MiaE NIY05_04530 IPR036291 NAD(P)-binding domain superfamily NIY05_04530 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_04530 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_04560 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site NIY05_04560 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_04560 IPR004839 Aminotransferase, class I/classII NIY05_04560 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_04560 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_04570 IPR029787 Nucleotide cyclase NIY05_04570 IPR000160 GGDEF domain NIY05_04570 IPR033416 Periplasmic sensor domain CHASE7 NIY05_04580 IPR006935 Helicase/UvrB, N-terminal NIY05_04580 IPR004807 UvrABC system, subunit B NIY05_04580 IPR024759 UvrB, YAD/RRR-motif-containing domain NIY05_04580 IPR001650 Helicase, C-terminal NIY05_04580 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_04580 IPR001943 UVR domain NIY05_04580 IPR041471 UvrB, interaction domain NIY05_04580 IPR036876 UVR domain superfamily NIY05_04580 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIY05_04590 IPR004626 RarD protein NIY05_04590 IPR000620 EamA domain NIY05_04595 IPR036291 NAD(P)-binding domain superfamily NIY05_04595 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I NIY05_04595 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain NIY05_04595 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain NIY05_04595 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site NIY05_04595 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family NIY05_04610 IPR006074 GTP1/OBG, conserved site NIY05_04610 IPR014100 GTP-binding protein Obg/CgtA NIY05_04610 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_04610 IPR006073 GTP binding domain NIY05_04610 IPR035101 GTP-binding protein, Obg-type NIY05_04610 IPR006169 GTP1/OBG domain NIY05_04610 IPR036726 GTP1/OBG domain superfamily NIY05_04610 IPR031167 OBG-type guanine nucleotide-binding (G) domain NIY05_04615 IPR015947 PUA-like superfamily NIY05_04615 IPR002478 PUA domain NIY05_04615 IPR019797 Glutamate 5-kinase, conserved site NIY05_04615 IPR036974 PUA domain superfamily NIY05_04615 IPR011529 Glutamate 5-kinase NIY05_04615 IPR041739 Glutamate-5-kinase domain NIY05_04615 IPR001048 Aspartate/glutamate/uridylate kinase NIY05_04615 IPR036393 Acetylglutamate kinase-like superfamily NIY05_04615 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase NIY05_04615 IPR001057 Glutamate/acetylglutamate kinase NIY05_04625 IPR011673 Protein of unknown function DUF1615 NIY05_04630 IPR013785 Aldolase-type TIM barrel NIY05_04630 IPR035587 DUS-like, FMN-binding domain NIY05_04630 IPR032887 tRNA-dihydrouridine synthase B NIY05_04630 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal NIY05_04630 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 NIY05_04630 IPR001269 tRNA-dihydrouridine synthase NIY05_04630 IPR018517 tRNA-dihydrouridine synthase, conserved site NIY05_04635 IPR013785 Aldolase-type TIM barrel NIY05_04635 IPR004136 Nitronate monooxygenase NIY05_04650 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain NIY05_04650 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like NIY05_04665 IPR029044 Nucleotide-diphospho-sugar transferases NIY05_04680 IPR006050 DNA photolyase, N-terminal NIY05_04680 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_04680 IPR002081 Cryptochrome/DNA photolyase class 1 NIY05_04680 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal NIY05_04680 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily NIY05_04680 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily NIY05_04680 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain NIY05_04685 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain NIY05_04690 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_04690 IPR023753 FAD/NAD(P)-binding domain NIY05_04695 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal NIY05_04695 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily NIY05_04695 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A NIY05_04695 IPR015956 Penicillin-binding protein, C-terminal domain superfamily NIY05_04695 IPR012338 Beta-lactamase/transpeptidase-like NIY05_04695 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal NIY05_04705 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric NIY05_04710 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain NIY05_04710 IPR020103 Pseudouridine synthase, catalytic domain superfamily NIY05_04710 IPR006145 Pseudouridine synthase, RsuA/RluA NIY05_04710 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F NIY05_04710 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site NIY05_04715 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site NIY05_04715 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic NIY05_04715 IPR024084 Isopropylmalate dehydrogenase-like domain NIY05_04735 IPR010645 Uncharacterised MFS-type transporter YbfB NIY05_04735 IPR036259 MFS transporter superfamily NIY05_04740 IPR005119 LysR, substrate-binding NIY05_04740 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_04740 IPR036390 Winged helix DNA-binding domain superfamily NIY05_04740 IPR000847 Transcription regulator HTH, LysR NIY05_04745 IPR036458 Sodium:dicarboxylate symporter superfamily NIY05_04745 IPR001991 Sodium:dicarboxylate symporter NIY05_04750 IPR003719 Phenazine biosynthesis PhzF protein NIY05_04755 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like NIY05_04755 IPR011765 Peptidase M16, N-terminal NIY05_04755 IPR001431 Peptidase M16, zinc-binding site NIY05_04755 IPR007863 Peptidase M16, C-terminal NIY05_04780 IPR034291 Thiamine phosphate synthase NIY05_04780 IPR022998 Thiamine phosphate synthase/TenI NIY05_04780 IPR013785 Aldolase-type TIM barrel NIY05_04780 IPR036206 Thiamin phosphate synthase superfamily NIY05_04785 IPR005814 Aminotransferase class-III NIY05_04785 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_04785 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_04785 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_04785 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase NIY05_04795 IPR020103 Pseudouridine synthase, catalytic domain superfamily NIY05_04795 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site NIY05_04795 IPR006145 Pseudouridine synthase, RsuA/RluA NIY05_04800 IPR023949 RNA polymerase-associated protein RapA NIY05_04800 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIY05_04800 IPR001650 Helicase, C-terminal NIY05_04800 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_04800 IPR022737 RNA polymerase recycling, bacterial, C-terminal NIY05_04800 IPR038718 SNF2-like, N-terminal domain superfamily NIY05_04800 IPR000330 SNF2-related, N-terminal domain NIY05_04800 IPR040765 RapA, N-terminal Tudor like domain 1 NIY05_04800 IPR040766 RapA, N-terminal Tudor-like domain 2 NIY05_04810 IPR023764 Transcriptional repressor HTH, FabR NIY05_04810 IPR001647 DNA-binding HTH domain, TetR-type NIY05_04810 IPR009057 Homeobox-like domain superfamily NIY05_04815 IPR017938 Riboflavin synthase-like beta-barrel NIY05_04815 IPR017927 FAD-binding domain, ferredoxin reductase-type NIY05_04815 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain NIY05_04815 IPR012675 Beta-grasp domain superfamily NIY05_04815 IPR000951 Phthalate dioxygenase reductase NIY05_04815 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NIY05_04815 IPR001433 Oxidoreductase FAD/NAD(P)-binding NIY05_04815 IPR036010 2Fe-2S ferredoxin-like superfamily NIY05_04815 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NIY05_04820 IPR005804 Fatty acid desaturase domain NIY05_04830 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NIY05_04830 IPR009057 Homeobox-like domain superfamily NIY05_04830 IPR041347 MftR, C-terminal NIY05_04830 IPR001647 DNA-binding HTH domain, TetR-type NIY05_04840 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_04840 IPR005814 Aminotransferase class-III NIY05_04840 IPR004637 2,4-diaminobutyrate 4-transaminase NIY05_04840 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_04840 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_04845 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_04845 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_04845 IPR002129 Pyridoxal phosphate-dependent decarboxylase NIY05_04845 IPR021115 Pyridoxal-phosphate binding site NIY05_04850 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_04850 IPR015590 Aldehyde dehydrogenase domain NIY05_04850 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_04850 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_04850 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NIY05_04850 IPR016160 Aldehyde dehydrogenase, cysteine active site NIY05_04855 IPR036390 Winged helix DNA-binding domain superfamily NIY05_04855 IPR011008 Dimeric alpha-beta barrel NIY05_04855 IPR019888 Transcription regulator AsnC-type NIY05_04855 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIY05_04855 IPR000485 AsnC-type HTH domain NIY05_04855 IPR011991 ArsR-like helix-turn-helix domain NIY05_04855 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NIY05_04855 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_04860 IPR012000 Thiamine pyrophosphate enzyme, central domain NIY05_04860 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain NIY05_04860 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding NIY05_04860 IPR029035 DHS-like NAD/FAD-binding domain superfamily NIY05_04860 IPR029061 Thiamin diphosphate-binding fold NIY05_04860 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme NIY05_04865 IPR004840 Amino acid permease, conserved site NIY05_04865 IPR004841 Amino acid permease/ SLC12A domain NIY05_04870 IPR011862 Phosphate binding protein NIY05_04870 IPR024370 PBP domain NIY05_04875 IPR011864 Phosphate ABC transporter, permease protein PstC NIY05_04875 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_04875 IPR035906 MetI-like superfamily NIY05_04880 IPR035906 MetI-like superfamily NIY05_04880 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_04880 IPR005672 Phosphate transport system permease protein PstA NIY05_04885 IPR003593 AAA+ ATPase domain NIY05_04885 IPR003439 ABC transporter-like NIY05_04885 IPR017871 ABC transporter, conserved site NIY05_04885 IPR015850 ABC transporter, phosphate import, PstB NIY05_04885 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_04885 IPR005670 Phosphate transport system permease protein 1 NIY05_04890 IPR013703 Peptidase S49, N-terminal proteobacteria NIY05_04890 IPR002142 Peptidase S49 NIY05_04890 IPR029045 ClpP/crotonase-like domain superfamily NIY05_04905 IPR000362 Fumarate lyase family NIY05_04905 IPR022761 Fumarate lyase, N-terminal NIY05_04905 IPR008948 L-Aspartase-like NIY05_04905 IPR004769 Adenylosuccinate lyase NIY05_04905 IPR024083 Fumarase/histidase, N-terminal NIY05_04905 IPR013539 Adenylosuccinate lyase PurB, C-terminal NIY05_04905 IPR020557 Fumarate lyase, conserved site NIY05_04910 IPR035932 HflD-like superfamily NIY05_04910 IPR007451 High frequency lysogenization protein HflD NIY05_04915 IPR004506 tRNA-specific 2-thiouridylase NIY05_04915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_04915 IPR023382 Adenine nucleotide alpha hydrolase-like domains NIY05_04920 IPR020084 NUDIX hydrolase, conserved site NIY05_04920 IPR015797 NUDIX hydrolase-like domain superfamily NIY05_04920 IPR020476 NUDIX hydrolase NIY05_04920 IPR023214 HAD superfamily NIY05_04920 IPR006357 HAD-superfamily hydrolase, subfamily IIA NIY05_04920 IPR036412 HAD-like superfamily NIY05_04920 IPR000086 NUDIX hydrolase domain NIY05_04925 IPR001451 Hexapeptide repeat NIY05_04925 IPR011004 Trimeric LpxA-like superfamily NIY05_04930 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal NIY05_04930 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily NIY05_04930 IPR012338 Beta-lactamase/transpeptidase-like NIY05_04930 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A NIY05_04930 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal NIY05_04930 IPR015956 Penicillin-binding protein, C-terminal domain superfamily NIY05_04945 IPR030048 Survival protein SurE NIY05_04945 IPR002828 Survival protein SurE-like phosphatase/nucleotidase NIY05_04945 IPR036523 SurE-like phosphatase/nucleotidase superfamily NIY05_04950 IPR011055 Duplicated hybrid motif NIY05_04950 IPR018392 LysM domain NIY05_04950 IPR036779 LysM domain superfamily NIY05_04950 IPR016047 Peptidase M23 NIY05_04955 IPR005119 LysR, substrate-binding NIY05_04955 IPR000847 Transcription regulator HTH, LysR NIY05_04955 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_04955 IPR036390 Winged helix DNA-binding domain superfamily NIY05_04960 IPR020568 Ribosomal protein S5 domain 2-type fold NIY05_04960 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIY05_04960 IPR008269 Peptidase S16, Lon proteolytic domain NIY05_04960 IPR027065 Lon protease NIY05_04960 IPR041699 Lon protease, AAA domain NIY05_04965 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 NIY05_04965 IPR011701 Major facilitator superfamily NIY05_04965 IPR020846 Major facilitator superfamily domain NIY05_04965 IPR036259 MFS transporter superfamily NIY05_04970 IPR037523 Vicinal oxygen chelate (VOC) domain NIY05_04970 IPR018146 Glyoxalase I, conserved site NIY05_04970 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIY05_04970 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIY05_04970 IPR004361 Glyoxalase I NIY05_04975 IPR038770 Sodium/solute symporter superfamily NIY05_04975 IPR016833 Putative sodium bile acid cotransporter NIY05_04980 IPR034704 L28p-like NIY05_04980 IPR002150 Ribosomal protein L31 NIY05_04980 IPR027491 Ribosomal protein L31 type A NIY05_04980 IPR042105 Ribosomal protein L31 superfamily NIY05_04995 IPR007197 Radical SAM NIY05_04995 IPR013785 Aldolase-type TIM barrel NIY05_04995 IPR022462 Lysine-2,3-aminomutase-like NIY05_04995 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase NIY05_05000 IPR012340 Nucleic acid-binding, OB-fold NIY05_05000 IPR014722 Ribosomal protein L2, domain 2 NIY05_05000 IPR020599 Translation elongation factor P/YeiP NIY05_05000 IPR013185 Translation elongation factor, KOW-like NIY05_05000 IPR001059 Translation elongation factor P/YeiP, central NIY05_05000 IPR011768 Translation elongation factor P NIY05_05000 IPR008991 Translation protein SH3-like domain superfamily NIY05_05000 IPR015365 Elongation factor P, C-terminal NIY05_05005 IPR025299 CstA, C-terminal domain NIY05_05005 IPR003706 CstA, N-terminal domain NIY05_05010 IPR007423 Selenoprotein, putative NIY05_05045 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal NIY05_05045 IPR042070 PucR C-terminal helix-turn-helix domain superfamily NIY05_05045 IPR041522 CdaR, GGDEF-like domain NIY05_05045 IPR025736 PucR C-terminal helix-turn-helix domain NIY05_05045 IPR029016 GAF-like domain superfamily NIY05_05060 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_05060 IPR016160 Aldehyde dehydrogenase, cysteine active site NIY05_05060 IPR015590 Aldehyde dehydrogenase domain NIY05_05060 IPR010061 Methylmalonate-semialdehyde dehydrogenase NIY05_05060 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_05060 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_05065 IPR011265 GABA permease NIY05_05065 IPR004840 Amino acid permease, conserved site NIY05_05065 IPR004841 Amino acid permease/ SLC12A domain NIY05_05070 IPR005119 LysR, substrate-binding NIY05_05070 IPR000847 Transcription regulator HTH, LysR NIY05_05070 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_05070 IPR036390 Winged helix DNA-binding domain superfamily NIY05_05075 IPR000060 BCCT transporter family NIY05_05075 IPR018093 BCCT transporter, conserved site NIY05_05080 IPR018093 BCCT transporter, conserved site NIY05_05080 IPR000060 BCCT transporter family NIY05_05085 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit NIY05_05085 IPR017941 Rieske [2Fe-2S] iron-sulphur domain NIY05_05085 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site NIY05_05085 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NIY05_05085 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain NIY05_05090 IPR015590 Aldehyde dehydrogenase domain NIY05_05090 IPR011264 Betaine aldehyde dehydrogenase NIY05_05090 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_05090 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NIY05_05090 IPR016160 Aldehyde dehydrogenase, cysteine active site NIY05_05090 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_05090 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_05100 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_05100 IPR023753 FAD/NAD(P)-binding domain NIY05_05100 IPR041364 Rubredoxin binding domain NIY05_05105 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC NIY05_05105 IPR006076 FAD dependent oxidoreductase NIY05_05105 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_05105 IPR008471 MnmC-like methyltransferase NIY05_05105 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal NIY05_05125 IPR000620 EamA domain NIY05_05135 IPR036165 YefM-like superfamily NIY05_05135 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM NIY05_05140 IPR005829 Sugar transporter, conserved site NIY05_05140 IPR003663 Sugar/inositol transporter NIY05_05140 IPR036259 MFS transporter superfamily NIY05_05140 IPR005828 Major facilitator, sugar transporter-like NIY05_05140 IPR020846 Major facilitator superfamily domain NIY05_05145 IPR036849 Enolase-like, C-terminal domain superfamily NIY05_05145 IPR034620 cis-3-Hydroxy-L-proline dehydratase NIY05_05145 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal NIY05_05145 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain NIY05_05145 IPR029065 Enolase C-terminal domain-like NIY05_05145 IPR029017 Enolase-like, N-terminal NIY05_05150 IPR001227 Acyl transferase domain superfamily NIY05_05150 IPR014043 Acyl transferase NIY05_05150 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase NIY05_05150 IPR013154 Alcohol dehydrogenase, N-terminal NIY05_05150 IPR036347 Erythronolide synthase, docking domain superfamily NIY05_05150 IPR015357 Erythronolide synthase, docking NIY05_05150 IPR018201 Beta-ketoacyl synthase, active site NIY05_05150 IPR014031 Beta-ketoacyl synthase, C-terminal NIY05_05150 IPR014030 Beta-ketoacyl synthase, N-terminal NIY05_05150 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding NIY05_05150 IPR036291 NAD(P)-binding domain superfamily NIY05_05150 IPR036736 ACP-like superfamily NIY05_05150 IPR011032 GroES-like superfamily NIY05_05150 IPR020806 Polyketide synthase, phosphopantetheine-binding domain NIY05_05150 IPR009081 Phosphopantetheine binding ACP domain NIY05_05150 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain NIY05_05150 IPR020807 Polyketide synthase, dehydratase domain NIY05_05150 IPR042104 Polyketide synthase, dehydratase domain superfamily NIY05_05150 IPR020843 Polyketide synthase, enoylreductase domain NIY05_05150 IPR013968 Polyketide synthase, ketoreductase domain NIY05_05150 IPR015083 Polyketide synthase, docking domain NIY05_05150 IPR032821 Ketoacyl-synthetase, C-terminal extension NIY05_05150 IPR006162 Phosphopantetheine attachment site NIY05_05150 IPR016039 Thiolase-like NIY05_05155 IPR009057 Homeobox-like domain superfamily NIY05_05155 IPR001647 DNA-binding HTH domain, TetR-type NIY05_05155 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NIY05_05175 IPR012093 Pirin NIY05_05175 IPR003829 Pirin, N-terminal domain NIY05_05175 IPR011051 RmlC-like cupin domain superfamily NIY05_05175 IPR014710 RmlC-like jelly roll fold NIY05_05175 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain NIY05_05185 IPR039446 Transcriptional regulator DauR-like NIY05_05185 IPR013559 YheO-like NIY05_05185 IPR039445 Transcriptional regulator DauR-like, HTH domain NIY05_05195 IPR010060 Non-ribosomal peptide synthase NIY05_05195 IPR010071 Amino acid adenylation domain NIY05_05195 IPR006162 Phosphopantetheine attachment site NIY05_05195 IPR009081 Phosphopantetheine binding ACP domain NIY05_05195 IPR020806 Polyketide synthase, phosphopantetheine-binding domain NIY05_05195 IPR001242 Condensation domain NIY05_05195 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily NIY05_05195 IPR042099 AMP-dependent synthetase-like superfamily NIY05_05195 IPR000873 AMP-dependent synthetase/ligase NIY05_05195 IPR036736 ACP-like superfamily NIY05_05195 IPR020845 AMP-binding, conserved site NIY05_05195 IPR025110 AMP-binding enzyme, C-terminal domain NIY05_05200 IPR009081 Phosphopantetheine binding ACP domain NIY05_05200 IPR010071 Amino acid adenylation domain NIY05_05200 IPR020806 Polyketide synthase, phosphopantetheine-binding domain NIY05_05200 IPR029058 Alpha/Beta hydrolase fold NIY05_05200 IPR020802 Polyketide synthase, thioesterase domain NIY05_05200 IPR025110 AMP-binding enzyme, C-terminal domain NIY05_05200 IPR020845 AMP-binding, conserved site NIY05_05200 IPR001031 Thioesterase NIY05_05200 IPR036736 ACP-like superfamily NIY05_05200 IPR000873 AMP-dependent synthetase/ligase NIY05_05200 IPR042099 AMP-dependent synthetase-like superfamily NIY05_05200 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily NIY05_05200 IPR001242 Condensation domain NIY05_05205 IPR037294 ABC transporter, BtuC-like NIY05_05205 IPR000522 ABC transporter, permease protein, BtuC-like NIY05_05210 IPR037294 ABC transporter, BtuC-like NIY05_05210 IPR000522 ABC transporter, permease protein, BtuC-like NIY05_05215 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_05215 IPR003439 ABC transporter-like NIY05_05215 IPR003593 AAA+ ATPase domain NIY05_05215 IPR017871 ABC transporter, conserved site NIY05_05220 IPR002491 ABC transporter periplasmic binding domain NIY05_05220 IPR033870 FatB domain NIY05_05225 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NIY05_05225 IPR010105 TonB-dependent siderophore receptor NIY05_05225 IPR010917 TonB-dependent receptor, conserved site NIY05_05225 IPR010916 TonB box, conserved site NIY05_05225 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_05225 IPR039423 TonB-dependent receptor-like NIY05_05225 IPR012910 TonB-dependent receptor, plug domain NIY05_05225 IPR030149 TonB-dependent siderophore receptor FcuA/FatA NIY05_05225 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_05230 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_05230 IPR031043 Putative histamine N-monooxygenase NIY05_05230 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase NIY05_05235 IPR020806 Polyketide synthase, phosphopantetheine-binding domain NIY05_05235 IPR009081 Phosphopantetheine binding ACP domain NIY05_05235 IPR006162 Phosphopantetheine attachment site NIY05_05235 IPR042099 AMP-dependent synthetase-like superfamily NIY05_05235 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily NIY05_05235 IPR000873 AMP-dependent synthetase/ligase NIY05_05235 IPR010071 Amino acid adenylation domain NIY05_05235 IPR029058 Alpha/Beta hydrolase fold NIY05_05235 IPR036736 ACP-like superfamily NIY05_05235 IPR020845 AMP-binding, conserved site NIY05_05235 IPR001242 Condensation domain NIY05_05240 IPR025110 AMP-binding enzyme, C-terminal domain NIY05_05240 IPR020845 AMP-binding, conserved site NIY05_05240 IPR000873 AMP-dependent synthetase/ligase NIY05_05240 IPR042099 AMP-dependent synthetase-like superfamily NIY05_05240 IPR011963 2,3-dihydroxybenzoate-AMP ligase NIY05_05245 IPR036736 ACP-like superfamily NIY05_05245 IPR000868 Isochorismatase-like NIY05_05245 IPR036380 Isochorismatase-like superfamily NIY05_05245 IPR009081 Phosphopantetheine binding ACP domain NIY05_05245 IPR016291 Isochorismatase NIY05_05250 IPR023523 Histidine decarboxylase, bacteria NIY05_05250 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_05250 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_05250 IPR021115 Pyridoxal-phosphate binding site NIY05_05250 IPR002129 Pyridoxal phosphate-dependent decarboxylase NIY05_05260 IPR011527 ABC transporter type 1, transmembrane domain NIY05_05260 IPR036640 ABC transporter type 1, transmembrane domain superfamily NIY05_05260 IPR003439 ABC transporter-like NIY05_05260 IPR017871 ABC transporter, conserved site NIY05_05260 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_05260 IPR003593 AAA+ ATPase domain NIY05_05265 IPR003593 AAA+ ATPase domain NIY05_05265 IPR011527 ABC transporter type 1, transmembrane domain NIY05_05265 IPR036640 ABC transporter type 1, transmembrane domain superfamily NIY05_05265 IPR003439 ABC transporter-like NIY05_05265 IPR017871 ABC transporter, conserved site NIY05_05265 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_05270 IPR001031 Thioesterase NIY05_05270 IPR029058 Alpha/Beta hydrolase fold NIY05_05270 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS NIY05_05280 IPR005801 ADC synthase NIY05_05280 IPR015890 Chorismate-utilising enzyme, C-terminal NIY05_05280 IPR004561 Isochorismate synthase NIY05_05290 IPR038071 UROD/MetE-like superfamily NIY05_05290 IPR006361 Uroporphyrinogen decarboxylase HemE NIY05_05290 IPR000257 Uroporphyrinogen decarboxylase (URO-D) NIY05_05295 IPR008535 Protein of unknown function DUF817 NIY05_05310 IPR001586 Beta-lactamase, class-C active site NIY05_05310 IPR001466 Beta-lactamase-related NIY05_05310 IPR012338 Beta-lactamase/transpeptidase-like NIY05_05320 IPR001474 GTP cyclohydrolase I NIY05_05320 IPR018234 GTP cyclohydrolase I, conserved site NIY05_05320 IPR020602 GTP cyclohydrolase I domain NIY05_05325 IPR036884 [2Fe-2S]-binding domain superfamily NIY05_05325 IPR036010 2Fe-2S ferredoxin-like superfamily NIY05_05325 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NIY05_05325 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site NIY05_05325 IPR012675 Beta-grasp domain superfamily NIY05_05325 IPR002888 [2Fe-2S]-binding NIY05_05330 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily NIY05_05330 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding NIY05_05330 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily NIY05_05330 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NIY05_05345 IPR013785 Aldolase-type TIM barrel NIY05_05345 IPR013798 Indole-3-glycerol phosphate synthase NIY05_05345 IPR001468 Indole-3-glycerol phosphate synthase, conserved site NIY05_05345 IPR011060 Ribulose-phosphate binding barrel NIY05_05350 IPR000312 Glycosyl transferase, family 3 NIY05_05350 IPR005940 Anthranilate phosphoribosyl transferase NIY05_05350 IPR017459 Glycosyl transferase family 3, N-terminal domain NIY05_05350 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily NIY05_05350 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily NIY05_05355 IPR010101 TonB-dependent vitamin B12 transporter BtuB NIY05_05355 IPR039426 Vitamin B12 transporter BtuB-like NIY05_05355 IPR012910 TonB-dependent receptor, plug domain NIY05_05355 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_05355 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_05355 IPR010916 TonB box, conserved site NIY05_05355 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NIY05_05355 IPR010917 TonB-dependent receptor, conserved site NIY05_05360 IPR014782 Peptidase M1, membrane alanine aminopeptidase NIY05_05360 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase NIY05_05360 IPR042097 Aminopeptidase N-like , N-terminal NIY05_05360 IPR024571 ERAP1-like C-terminal domain NIY05_05360 IPR034016 Aminopeptidase N-type NIY05_05365 IPR029062 Class I glutamine amidotransferase-like NIY05_05365 IPR017926 Glutamine amidotransferase NIY05_05365 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain NIY05_05375 IPR000109 Proton-dependent oligopeptide transporter family NIY05_05375 IPR005279 Dipeptide/tripeptide permease NIY05_05375 IPR020846 Major facilitator superfamily domain NIY05_05375 IPR036259 MFS transporter superfamily NIY05_05375 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site NIY05_05380 IPR001637 Glutamine synthetase class-I, adenylation site NIY05_05380 IPR036651 Glutamine synthetase, N-terminal domain superfamily NIY05_05380 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain NIY05_05380 IPR008146 Glutamine synthetase, catalytic domain NIY05_05380 IPR027303 Glutamine synthetase, glycine-rich site NIY05_05380 IPR004809 Glutamine synthetase type I NIY05_05380 IPR027302 Glutamine synthetase, N-terminal conserved site NIY05_05380 IPR008147 Glutamine synthetase, beta-Grasp domain NIY05_05385 IPR007440 Chorismate--pyruvate lyase NIY05_05385 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily NIY05_05390 IPR006370 4-hydroxybenzoate polyprenyltransferase-like NIY05_05390 IPR039653 Prenyltransferase NIY05_05390 IPR000537 UbiA prenyltransferase family NIY05_05425 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily NIY05_05425 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily NIY05_05425 IPR001189 Manganese/iron superoxide dismutase NIY05_05425 IPR019832 Manganese/iron superoxide dismutase, C-terminal NIY05_05425 IPR019833 Manganese/iron superoxide dismutase, binding site NIY05_05425 IPR019831 Manganese/iron superoxide dismutase, N-terminal NIY05_05430 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 NIY05_05430 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily NIY05_05435 IPR001478 PDZ domain NIY05_05435 IPR011782 Peptidase S1C, Do NIY05_05435 IPR009003 Peptidase S1, PA clan NIY05_05435 IPR001940 Peptidase S1C NIY05_05435 IPR036034 PDZ superfamily NIY05_05440 IPR012006 tRNA nucleotidyltransferase, proteobacteria NIY05_05440 IPR003607 HD/PDEase domain NIY05_05440 IPR002646 Poly A polymerase, head domain NIY05_05440 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain NIY05_05445 IPR002505 Phosphate acetyl/butaryl transferase NIY05_05445 IPR042112 Phosphate acetyltransferase, domain 2 NIY05_05445 IPR042113 Phosphate acetyltransferase, domain 1 NIY05_05445 IPR012188 NAD(P)-dependent malic enzyme NIY05_05445 IPR036291 NAD(P)-binding domain superfamily NIY05_05445 IPR037062 Malic enzyme, N-terminal domain superfamily NIY05_05445 IPR012301 Malic enzyme, N-terminal domain NIY05_05445 IPR015884 Malic enzyme, conserved site NIY05_05445 IPR012302 Malic enzyme, NAD-binding NIY05_05450 IPR001633 EAL domain NIY05_05450 IPR035919 EAL domain superfamily NIY05_05450 IPR000160 GGDEF domain NIY05_05450 IPR005330 MHYT domain NIY05_05450 IPR029787 Nucleotide cyclase NIY05_05455 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NIY05_05455 IPR006700 Ribosomal RNA small subunit methyltransferase E NIY05_05455 IPR029028 Alpha/beta knot methyltransferases NIY05_05455 IPR015947 PUA-like superfamily NIY05_05460 IPR029041 FAD-linked oxidoreductase-like NIY05_05460 IPR003171 Methylenetetrahydrofolate reductase NIY05_05460 IPR004620 5,10-methylenetetrahydrofolate reductase NIY05_05465 IPR042172 Adenosylhomocysteinase-like superfamily NIY05_05465 IPR000043 Adenosylhomocysteinase-like NIY05_05465 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NIY05_05465 IPR036291 NAD(P)-binding domain superfamily NIY05_05465 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site NIY05_05480 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type NIY05_05480 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_05480 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_05480 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_05480 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_05480 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_05485 IPR006638 Elp3/MiaB/NifB NIY05_05485 IPR003698 Lipoyl synthase NIY05_05485 IPR013785 Aldolase-type TIM barrel NIY05_05485 IPR007197 Radical SAM NIY05_05490 IPR023753 FAD/NAD(P)-binding domain NIY05_05490 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily NIY05_05490 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I NIY05_05490 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIY05_05490 IPR022962 Soluble pyridine nucleotide transhydrogenase NIY05_05490 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_05500 IPR011701 Major facilitator superfamily NIY05_05500 IPR036259 MFS transporter superfamily NIY05_05500 IPR004737 Nitrate transporter NIY05_05500 IPR020846 Major facilitator superfamily domain NIY05_05510 IPR036005 Creatinase/aminopeptidase-like NIY05_05510 IPR000994 Peptidase M24 NIY05_05510 IPR001714 Peptidase M24, methionine aminopeptidase NIY05_05510 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 NIY05_05515 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid NIY05_05515 IPR001865 Ribosomal protein S2 NIY05_05515 IPR018130 Ribosomal protein S2, conserved site NIY05_05515 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily NIY05_05520 IPR036402 Elongation factor Ts, dimerisation domain superfamily NIY05_05520 IPR001816 Translation elongation factor EFTs/EF1B NIY05_05520 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation NIY05_05520 IPR018101 Translation elongation factor Ts, conserved site NIY05_05520 IPR009060 UBA-like superfamily NIY05_05530 IPR018062 HTH domain AraC-type, conserved site NIY05_05530 IPR011051 RmlC-like cupin domain superfamily NIY05_05530 IPR009057 Homeobox-like domain superfamily NIY05_05530 IPR018060 DNA binding HTH domain, AraC-type NIY05_05550 IPR034718 Endolytic peptidoglycan transglycosylase RlpA NIY05_05550 IPR009009 RlpA-like protein, double-psi beta-barrel domain NIY05_05550 IPR036908 RlpA-like domain superfamily NIY05_05550 IPR012997 Rare lipoprotein A NIY05_05550 IPR007730 Sporulation-like domain NIY05_05555 IPR023346 Lysozyme-like domain superfamily NIY05_05555 IPR011757 Lytic transglycosylase MltB NIY05_05555 IPR031304 Transglycosylase SLT domain 2 NIY05_05560 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site NIY05_05560 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA NIY05_05560 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB NIY05_05570 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF NIY05_05570 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal NIY05_05570 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 NIY05_05575 IPR013525 ABC-2 type transporter NIY05_05575 IPR000412 ABC-2 transporter NIY05_05580 IPR003593 AAA+ ATPase domain NIY05_05580 IPR003439 ABC transporter-like NIY05_05580 IPR017871 ABC transporter, conserved site NIY05_05580 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_05610 IPR001085 Serine hydroxymethyltransferase NIY05_05610 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_05610 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site NIY05_05610 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_05610 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_05610 IPR039429 Serine hydroxymethyltransferase-like domain NIY05_05615 IPR010131 RND efflux system, outer membrane lipoprotein, NodT NIY05_05615 IPR003423 Outer membrane efflux protein NIY05_05620 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIY05_05620 IPR001036 Acriflavin resistance protein NIY05_05620 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 NIY05_05625 IPR039562 Membrane fusion protein, biotin-lipoyl like domain NIY05_05625 IPR022824 Multidrug resistance protein MdtA NIY05_05625 IPR006143 RND efflux pump, membrane fusion protein NIY05_05630 IPR005119 LysR, substrate-binding NIY05_05630 IPR000847 Transcription regulator HTH, LysR NIY05_05630 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_05630 IPR036390 Winged helix DNA-binding domain superfamily NIY05_05635 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NIY05_05635 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter NIY05_05635 IPR018313 Solute-binding protein family 3, conserved site NIY05_05640 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_05640 IPR030199 Histidine transport system permease protein HisQ NIY05_05640 IPR035906 MetI-like superfamily NIY05_05640 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain NIY05_05645 IPR035906 MetI-like superfamily NIY05_05645 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_05645 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain NIY05_05650 IPR003593 AAA+ ATPase domain NIY05_05650 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type NIY05_05650 IPR003439 ABC transporter-like NIY05_05650 IPR017871 ABC transporter, conserved site NIY05_05650 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_05655 IPR000390 Small multidrug resistance protein family NIY05_05660 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIY05_05660 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIY05_05665 IPR001539 Peptidase U32 NIY05_05665 IPR032525 Peptidase family U32, C-terminal NIY05_05670 IPR004839 Aminotransferase, class I/classII NIY05_05670 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_05670 IPR000524 Transcription regulator HTH, GntR NIY05_05670 IPR036390 Winged helix DNA-binding domain superfamily NIY05_05670 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_05670 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_05670 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_05675 IPR003719 Phenazine biosynthesis PhzF protein NIY05_05680 IPR017938 Riboflavin synthase-like beta-barrel NIY05_05680 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NIY05_05680 IPR033892 Ferredoxin--NADP reductase, bacteria NIY05_05680 IPR001433 Oxidoreductase FAD/NAD(P)-binding NIY05_05680 IPR017927 FAD-binding domain, ferredoxin reductase-type NIY05_05680 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain NIY05_05680 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase NIY05_05685 IPR023370 TrmO-like, N-terminal domain NIY05_05685 IPR041369 TrmO, C-terminal NIY05_05685 IPR023368 Uncharacterised protein family UPF0066, conserved site NIY05_05685 IPR040372 YaeB-like NIY05_05685 IPR036413 YaeB-like superfamily NIY05_05685 IPR036414 YaeB, N-terminal domain superfamily NIY05_05695 IPR007831 General secretory system II, protein E, N-terminal NIY05_05695 IPR042181 Type II secretion system, protein E, N-terminal NIY05_05695 IPR037257 General secretory system II, protein E, N-terminal superfamily NIY05_05695 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_05695 IPR013374 ATPase, type IV, pilus assembly, PilB NIY05_05695 IPR003593 AAA+ ATPase domain NIY05_05695 IPR001482 Type II/IV secretion system protein NIY05_05705 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_05705 IPR011006 CheY-like superfamily NIY05_05705 IPR001867 OmpR/PhoB-type DNA-binding domain NIY05_05705 IPR016032 Signal transduction response regulator, C-terminal effector NIY05_05705 IPR001789 Signal transduction response regulator, receiver domain NIY05_05705 IPR039420 Transcriptional regulatory protein WalR-like NIY05_05710 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NIY05_05710 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NIY05_05710 IPR005467 Histidine kinase domain NIY05_05710 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NIY05_05710 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_05710 IPR013727 Two-component sensor kinase, N-terminal NIY05_05710 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_05720 IPR000086 NUDIX hydrolase domain NIY05_05720 IPR020084 NUDIX hydrolase, conserved site NIY05_05720 IPR003561 Mutator MutT NIY05_05720 IPR020476 NUDIX hydrolase NIY05_05720 IPR015797 NUDIX hydrolase-like domain superfamily NIY05_05730 IPR028166 Bifunctional transglycosylase second domain NIY05_05730 IPR012338 Beta-lactamase/transpeptidase-like NIY05_05730 IPR001264 Glycosyl transferase, family 51 NIY05_05730 IPR023346 Lysozyme-like domain superfamily NIY05_05730 IPR011813 Penicillin-binding protein 1B NIY05_05730 IPR036950 Penicillin binding protein transglycosylase domain NIY05_05730 IPR001460 Penicillin-binding protein, transpeptidase NIY05_05735 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily NIY05_05735 IPR002504 NAD kinase NIY05_05735 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal NIY05_05735 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal NIY05_05740 IPR009749 Protein of unknown function DUF1315 NIY05_05745 IPR005940 Anthranilate phosphoribosyl transferase NIY05_05745 IPR000312 Glycosyl transferase, family 3 NIY05_05745 IPR017459 Glycosyl transferase family 3, N-terminal domain NIY05_05745 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily NIY05_05745 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily NIY05_05750 IPR023954 C4-dicarboxylate transport protein NIY05_05750 IPR001991 Sodium:dicarboxylate symporter NIY05_05750 IPR018107 Sodium:dicarboxylate symporter, conserved site NIY05_05750 IPR036458 Sodium:dicarboxylate symporter superfamily NIY05_05755 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_05755 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_05755 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_05755 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_05755 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_05755 IPR006089 Acyl-CoA dehydrogenase, conserved site NIY05_05755 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_05760 IPR029058 Alpha/Beta hydrolase fold NIY05_05760 IPR000801 Putative esterase NIY05_05765 IPR001086 Prephenate dehydratase NIY05_05765 IPR002912 ACT domain NIY05_05765 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase NIY05_05765 IPR036263 Chorismate mutase type II superfamily NIY05_05765 IPR036979 Chorismate mutase domain superfamily NIY05_05765 IPR002701 Chorismate mutase II, prokaryotic-type NIY05_05765 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain NIY05_05765 IPR018528 Prephenate dehydratase, conserved site NIY05_05770 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta NIY05_05770 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site NIY05_05770 IPR036968 Enolpyruvate transferase domain superfamily NIY05_05770 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase NIY05_05770 IPR001986 Enolpyruvate transferase domain NIY05_05780 IPR002933 Peptidase M20 NIY05_05780 IPR011650 Peptidase M20, dimerisation domain NIY05_05780 IPR001160 Peptidase M20C, Xaa-His dipeptidase NIY05_05785 IPR001279 Metallo-beta-lactamase NIY05_05785 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NIY05_05785 IPR013471 Ribonuclease Z/BN NIY05_05795 IPR005583 Peroxide stress protein YaaA NIY05_05805 IPR013785 Aldolase-type TIM barrel NIY05_05805 IPR033983 Thiazole synthase ThiG NIY05_05805 IPR008867 Thiazole synthase NIY05_05815 IPR006696 Protein of unknown function DUF423 NIY05_05820 IPR013325 RNA polymerase sigma factor, region 2 NIY05_05820 IPR007630 RNA polymerase sigma-70 region 4 NIY05_05820 IPR007627 RNA polymerase sigma-70 region 2 NIY05_05820 IPR009042 RNA polymerase sigma-70 region 1.2 NIY05_05820 IPR000943 RNA polymerase sigma-70 NIY05_05820 IPR013324 RNA polymerase sigma factor, region 3/4-like NIY05_05820 IPR014284 RNA polymerase sigma-70 like domain NIY05_05820 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria NIY05_05835 IPR012156 Cold shock, CspA NIY05_05835 IPR011129 Cold shock domain NIY05_05835 IPR019844 Cold-shock (CSD) domain NIY05_05835 IPR002059 Cold-shock protein, DNA-binding NIY05_05835 IPR012340 Nucleic acid-binding, OB-fold NIY05_05840 IPR014014 RNA helicase, DEAD-box type, Q motif NIY05_05840 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site NIY05_05840 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_05840 IPR001650 Helicase, C-terminal NIY05_05840 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIY05_05840 IPR011545 DEAD/DEAH box helicase domain NIY05_05840 IPR023554 ATP-dependent RNA helicase RhlB type NIY05_05850 IPR029479 Nitroreductase NIY05_05850 IPR000415 Nitroreductase-like NIY05_05850 IPR026021 Putative NAD(P)H nitroreductase YdjA-like NIY05_05855 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal NIY05_05855 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal NIY05_05855 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent NIY05_05855 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NIY05_05855 IPR013328 6-phosphogluconate dehydrogenase, domain 2 NIY05_05855 IPR036291 NAD(P)-binding domain superfamily NIY05_05865 IPR002104 Integrase, catalytic domain NIY05_05865 IPR011010 DNA breaking-rejoining enzyme, catalytic core NIY05_05865 IPR010998 Integrase/recombinase, N-terminal NIY05_05865 IPR013762 Integrase-like, catalytic domain superfamily NIY05_05960 IPR002941 DNA methylase N-4/N-6 NIY05_05960 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site NIY05_05960 IPR001091 Restriction/modification DNA-methylase NIY05_05960 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_06195 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 NIY05_06195 IPR005719 Dihydroorotate dehydrogenase, class 2 NIY05_06195 IPR001295 Dihydroorotate dehydrogenase, conserved site NIY05_06195 IPR013785 Aldolase-type TIM barrel NIY05_06195 IPR005720 Dihydroorotate dehydrogenase domain NIY05_06200 IPR003825 Colicin V production, CvpA NIY05_06205 IPR000836 Phosphoribosyltransferase domain NIY05_06205 IPR035584 Amidophosphoribosyltransferase, N-terminal NIY05_06205 IPR005854 Amidophosphoribosyltransferase NIY05_06205 IPR029057 Phosphoribosyltransferase-like NIY05_06205 IPR029055 Nucleophile aminohydrolases, N-terminal NIY05_06205 IPR017932 Glutamine amidotransferase type 2 domain NIY05_06220 IPR023756 Glyoxylate/hydroxypyruvate reductase B NIY05_06220 IPR036291 NAD(P)-binding domain superfamily NIY05_06220 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NIY05_06220 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain NIY05_06220 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NIY05_06225 IPR011990 Tetratricopeptide-like helical domain superfamily NIY05_06225 IPR001915 Peptidase M48 NIY05_06225 IPR030873 Beta-barrel assembly-enhancing protease NIY05_06230 IPR042184 YqeY/Aim41, N-terminal domain NIY05_06230 IPR019004 Uncharacterised protein YqeY/Aim41 NIY05_06230 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 NIY05_06230 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like NIY05_06235 IPR001911 Ribosomal protein S21 NIY05_06235 IPR018278 Ribosomal protein S21, conserved site NIY05_06235 IPR038380 Ribosomal protein S21 superfamily NIY05_06240 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD NIY05_06240 IPR017860 Peptidase M22, conserved site NIY05_06240 IPR017861 Kae1/TsaD family NIY05_06240 IPR000905 Gcp-like domain NIY05_06260 IPR008271 Serine/threonine-protein kinase, active site NIY05_06260 IPR011009 Protein kinase-like domain superfamily NIY05_06260 IPR000719 Protein kinase domain NIY05_06260 IPR017441 Protein kinase, ATP binding site NIY05_06285 IPR005119 LysR, substrate-binding NIY05_06285 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_06285 IPR036390 Winged helix DNA-binding domain superfamily NIY05_06285 IPR000847 Transcription regulator HTH, LysR NIY05_06290 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_06290 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_06290 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_06290 IPR005814 Aminotransferase class-III NIY05_06295 IPR010061 Methylmalonate-semialdehyde dehydrogenase NIY05_06295 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_06295 IPR016160 Aldehyde dehydrogenase, cysteine active site NIY05_06295 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_06295 IPR015590 Aldehyde dehydrogenase domain NIY05_06295 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_06300 IPR004841 Amino acid permease/ SLC12A domain NIY05_06300 IPR004840 Amino acid permease, conserved site NIY05_06300 IPR011265 GABA permease NIY05_06330 IPR005220 Bacterial OB-fold NIY05_06330 IPR036700 Bacterial OB-fold superfamily NIY05_06330 IPR016052 Bacteriophage 933W, L0136 NIY05_06355 IPR029058 Alpha/Beta hydrolase fold NIY05_06355 IPR000073 Alpha/beta hydrolase fold-1 NIY05_06355 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit NIY05_06360 IPR004445 Sodium/glutamate symport carrier protein GltS NIY05_06370 IPR011711 GntR, C-terminal NIY05_06370 IPR008920 Transcription regulator FadR/GntR, C-terminal NIY05_06370 IPR000524 Transcription regulator HTH, GntR NIY05_06370 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_06370 IPR036390 Winged helix DNA-binding domain superfamily NIY05_06420 IPR005829 Sugar transporter, conserved site NIY05_06420 IPR036292 Proline/betaine transporter ProP, C-terminal NIY05_06420 IPR020846 Major facilitator superfamily domain NIY05_06420 IPR004736 MFS transporter, metabolite:H symporter NIY05_06420 IPR005828 Major facilitator, sugar transporter-like NIY05_06420 IPR036259 MFS transporter superfamily NIY05_06420 IPR015041 Osmosensory transporter coiled coil NIY05_06445 IPR004839 Aminotransferase, class I/classII NIY05_06445 IPR022518 Aspartate 4-decarboxylase NIY05_06445 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site NIY05_06445 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_06445 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_06445 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_06450 IPR006037 Regulator of K+ conductance, C-terminal NIY05_06450 IPR022457 Aspartate-alanine antiporter NIY05_06450 IPR006512 YidE/YbjL duplication NIY05_06450 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily NIY05_06460 IPR007498 Intermembrane transport protein PqiA-like NIY05_06460 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type NIY05_06465 IPR003399 Mce/MlaD NIY05_06475 IPR004380 Aspartate racemase NIY05_06475 IPR033134 Asp/Glu racemase, active site 2 NIY05_06475 IPR001920 Asp/Glu racemase NIY05_06475 IPR015942 Asp/Glu/hydantoin racemase NIY05_06475 IPR018187 Asp/Glu racemase, active site 1 NIY05_06480 IPR000620 EamA domain NIY05_06485 IPR011042 Six-bladed beta-propeller, TolB-like NIY05_06485 IPR012938 Glucose/Sorbosone dehydrogenase NIY05_06485 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase NIY05_06495 IPR032874 DDE domain NIY05_06495 IPR001584 Integrase, catalytic core NIY05_06495 IPR012337 Ribonuclease H-like superfamily NIY05_06495 IPR036397 Ribonuclease H superfamily NIY05_06505 IPR011009 Protein kinase-like domain superfamily NIY05_06505 IPR002575 Aminoglycoside phosphotransferase NIY05_06505 IPR024165 Aminoglycoside 3-phosphotransferase NIY05_06510 IPR036397 Ribonuclease H superfamily NIY05_06510 IPR032874 DDE domain NIY05_06510 IPR012337 Ribonuclease H-like superfamily NIY05_06510 IPR001584 Integrase, catalytic core NIY05_06520 IPR000182 GNAT domain NIY05_06520 IPR030971 Aminoglycoside N(6')-acetyltransferase, AacA4 type NIY05_06520 IPR016181 Acyl-CoA N-acyltransferase NIY05_06525 IPR001451 Hexapeptide repeat NIY05_06525 IPR018357 Hexapeptide transferase, conserved site NIY05_06525 IPR011004 Trimeric LpxA-like superfamily NIY05_06535 IPR000390 Small multidrug resistance protein family NIY05_06540 IPR006390 Dihydropteroate synthase NIY05_06540 IPR011005 Dihydropteroate synthase-like NIY05_06540 IPR000489 Pterin-binding domain NIY05_06555 IPR025981 Ribosomal RNA aminoglycoside-resistance methyltransferase NIY05_06555 IPR010769 Ribosomal RNA aminoglycoside-resistance methyltransferase, Gram-negative bacteria NIY05_06555 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_06570 IPR003593 AAA+ ATPase domain NIY05_06570 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_06570 IPR003439 ABC transporter-like NIY05_06570 IPR032781 ABC-transporter extension domain NIY05_06575 IPR002575 Aminoglycoside phosphotransferase NIY05_06575 IPR011009 Protein kinase-like domain superfamily NIY05_06585 IPR039552 Transposase IS66, C-terminal NIY05_06585 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_06585 IPR004291 Transposase, IS66 NIY05_06585 IPR024463 Transposase TnpC, homeodomain NIY05_06585 IPR024474 Zinc-finger binding domain of transposase IS66 NIY05_06590 IPR001584 Integrase, catalytic core NIY05_06590 IPR012337 Ribonuclease H-like superfamily NIY05_06590 IPR032874 DDE domain NIY05_06590 IPR036397 Ribonuclease H superfamily NIY05_06605 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NIY05_06605 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal NIY05_06605 IPR001647 DNA-binding HTH domain, TetR-type NIY05_06605 IPR009057 Homeobox-like domain superfamily NIY05_06605 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NIY05_06610 IPR003829 Pirin, N-terminal domain NIY05_06610 IPR011051 RmlC-like cupin domain superfamily NIY05_06610 IPR014710 RmlC-like jelly roll fold NIY05_06610 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain NIY05_06610 IPR012093 Pirin NIY05_06620 IPR036291 NAD(P)-binding domain superfamily NIY05_06620 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_06620 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_06625 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_06625 IPR020946 Flavin monooxygenase-like NIY05_06635 IPR006043 Xanthine/uracil/vitamin C permease NIY05_06635 IPR026033 Azaguanine-like transporters NIY05_06640 IPR006330 Adenosine/adenine deaminase NIY05_06640 IPR032466 Metal-dependent hydrolase NIY05_06640 IPR028892 Adenine deaminase type 2 NIY05_06640 IPR001365 Adenosine/AMP deaminase domain NIY05_06645 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase NIY05_06645 IPR016174 Di-haem cytochrome, transmembrane NIY05_06655 IPR022898 Ribonuclease HII NIY05_06655 IPR001352 Ribonuclease HII/HIII NIY05_06655 IPR024567 Ribonuclease HII/HIII domain NIY05_06655 IPR012337 Ribonuclease H-like superfamily NIY05_06655 IPR036397 Ribonuclease H superfamily NIY05_06660 IPR003751 Translational regulator CsrA NIY05_06660 IPR036107 Carbon storage regulator superfamily NIY05_06665 IPR002912 ACT domain NIY05_06665 IPR041740 Aspartokinase catalytic domain NIY05_06665 IPR036393 Acetylglutamate kinase-like superfamily NIY05_06665 IPR001048 Aspartate/glutamate/uridylate kinase NIY05_06665 IPR005260 Aspartate kinase, monofunctional class NIY05_06665 IPR001341 Aspartate kinase NIY05_06665 IPR018042 Aspartate kinase, conserved site NIY05_06665 IPR027795 CASTOR, ACT domain NIY05_06670 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain NIY05_06670 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily NIY05_06670 IPR012947 Threonyl/alanyl tRNA synthetase, SAD NIY05_06670 IPR002318 Alanine-tRNA ligase, class IIc NIY05_06670 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria NIY05_06670 IPR003156 DHHA1 domain NIY05_06670 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily NIY05_06670 IPR009000 Translation protein, beta-barrel domain superfamily NIY05_06670 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal NIY05_06675 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain NIY05_06675 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain NIY05_06675 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I NIY05_06675 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family NIY05_06675 IPR036291 NAD(P)-binding domain superfamily NIY05_06675 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site NIY05_06680 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain NIY05_06680 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit NIY05_06680 IPR004517 ATP phosphoribosyltransferase regulatory subunit NIY05_06685 IPR042111 Adenylosuccinate synthetase, domain 3 NIY05_06685 IPR018220 Adenylosuccinate synthase, GTP-binding site NIY05_06685 IPR033128 Adenylosuccinate synthase, active site NIY05_06685 IPR042109 Adenylosuccinate synthetase, domain 1 NIY05_06685 IPR042110 Adenylosuccinate synthetase, domain 2 NIY05_06685 IPR001114 Adenylosuccinate synthetase NIY05_06685 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_06700 IPR020471 Aldo/keto reductase NIY05_06700 IPR023210 NADP-dependent oxidoreductase domain NIY05_06700 IPR036812 NADP-dependent oxidoreductase domain superfamily NIY05_06710 IPR036390 Winged helix DNA-binding domain superfamily NIY05_06710 IPR014710 RmlC-like jelly roll fold NIY05_06710 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_06710 IPR018335 Transcription regulator HTH, Crp-type, conserved site NIY05_06710 IPR018490 Cyclic nucleotide-binding-like NIY05_06710 IPR000595 Cyclic nucleotide-binding domain NIY05_06710 IPR018488 Cyclic nucleotide-binding, conserved site NIY05_06710 IPR012318 Crp-type HTH domain NIY05_06720 IPR015946 K homology domain-like, alpha/beta NIY05_06720 IPR003718 OsmC/Ohr family NIY05_06720 IPR036102 OsmC/Ohr superfamily NIY05_06735 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_06735 IPR001270 ClpA/B family NIY05_06735 IPR041546 ClpA/ClpB, AAA lid domain NIY05_06735 IPR028299 ClpA/B, conserved site 2 NIY05_06735 IPR018368 ClpA/B, conserved site 1 NIY05_06735 IPR004176 Clp, N-terminal NIY05_06735 IPR003959 ATPase, AAA-type, core NIY05_06735 IPR019489 Clp ATPase, C-terminal NIY05_06735 IPR017730 Chaperonin ClpB NIY05_06735 IPR003593 AAA+ ATPase domain NIY05_06735 IPR036628 Clp, N-terminal domain superfamily NIY05_06750 IPR004114 THUMP domain NIY05_06750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_06750 IPR000241 Putative RNA methylase domain NIY05_06750 IPR019614 S-adenosylmethionine-dependent methyltransferase NIY05_06750 IPR017244 Ribosomal RNA large subunit methyltransferase K/L NIY05_06750 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NIY05_06760 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding NIY05_06760 IPR006130 Aspartate/ornithine carbamoyltransferase NIY05_06760 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily NIY05_06760 IPR002082 Aspartate carbamoyltransferase NIY05_06760 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain NIY05_06765 IPR006680 Amidohydrolase-related NIY05_06765 IPR004722 Dihydroorotase NIY05_06765 IPR011059 Metal-dependent hydrolase, composite domain superfamily NIY05_06765 IPR032466 Metal-dependent hydrolase NIY05_06770 IPR036737 OmpA-like domain superfamily NIY05_06770 IPR006690 Outer membrane protein, OmpA-like, conserved site NIY05_06770 IPR006665 OmpA-like domain NIY05_06770 IPR039567 Glycine zipper domain NIY05_06770 IPR006664 Outer membrane protein, bacterial NIY05_06780 IPR010987 Glutathione S-transferase, C-terminal-like NIY05_06780 IPR036282 Glutathione S-transferase, C-terminal domain superfamily NIY05_06780 IPR004045 Glutathione S-transferase, N-terminal NIY05_06780 IPR004046 Glutathione S-transferase, C-terminal NIY05_06780 IPR036249 Thioredoxin-like superfamily NIY05_06785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_06785 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type NIY05_06795 IPR004046 Glutathione S-transferase, C-terminal NIY05_06795 IPR036249 Thioredoxin-like superfamily NIY05_06795 IPR004045 Glutathione S-transferase, N-terminal NIY05_06795 IPR036282 Glutathione S-transferase, C-terminal domain superfamily NIY05_06795 IPR010987 Glutathione S-transferase, C-terminal-like NIY05_06805 IPR012081 Alkyl hydroperoxide reductase subunit F NIY05_06805 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_06805 IPR023753 FAD/NAD(P)-binding domain NIY05_06805 IPR002109 Glutaredoxin NIY05_06805 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site NIY05_06805 IPR012336 Thioredoxin-like fold NIY05_06805 IPR036249 Thioredoxin-like superfamily NIY05_06815 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase NIY05_06815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_06825 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant NIY05_06825 IPR017559 Alkyl hydroperoxide reductase subunit C NIY05_06825 IPR013766 Thioredoxin domain NIY05_06825 IPR019479 Peroxiredoxin, C-terminal NIY05_06825 IPR024706 Peroxiredoxin, AhpC-type NIY05_06825 IPR036249 Thioredoxin-like superfamily NIY05_06830 IPR003593 AAA+ ATPase domain NIY05_06830 IPR011545 DEAD/DEAH box helicase domain NIY05_06830 IPR011709 Domain of unknown function DUF1605 NIY05_06830 IPR007502 Helicase-associated domain NIY05_06830 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIY05_06830 IPR001650 Helicase, C-terminal NIY05_06830 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_06830 IPR024590 RNA helicase HrpA, C-terminal NIY05_06830 IPR010222 RNA helicase HrpA NIY05_06835 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NIY05_06835 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal NIY05_06835 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 NIY05_06835 IPR016039 Thiolase-like NIY05_06845 IPR011701 Major facilitator superfamily NIY05_06845 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family NIY05_06845 IPR020846 Major facilitator superfamily domain NIY05_06845 IPR036259 MFS transporter superfamily NIY05_06845 IPR005829 Sugar transporter, conserved site NIY05_06850 IPR004711 Benzoate transporter NIY05_06855 IPR036291 NAD(P)-binding domain superfamily NIY05_06855 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_06855 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_06860 IPR001433 Oxidoreductase FAD/NAD(P)-binding NIY05_06860 IPR017927 FAD-binding domain, ferredoxin reductase-type NIY05_06860 IPR036010 2Fe-2S ferredoxin-like superfamily NIY05_06860 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NIY05_06860 IPR017938 Riboflavin synthase-like beta-barrel NIY05_06860 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NIY05_06860 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase NIY05_06860 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site NIY05_06860 IPR012675 Beta-grasp domain superfamily NIY05_06860 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain NIY05_06865 IPR000391 Ring-hydroxylating dioxygenase beta subunit NIY05_06865 IPR032710 NTF2-like domain superfamily NIY05_06865 IPR017641 Benzoate 1,2-dioxygenase, small subunit NIY05_06870 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain NIY05_06870 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site NIY05_06870 IPR017941 Rieske [2Fe-2S] iron-sulphur domain NIY05_06870 IPR017639 Benzoate 1,2-dioxygenase, large subunit NIY05_06870 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NIY05_06870 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit NIY05_06880 IPR005119 LysR, substrate-binding NIY05_06880 IPR036390 Winged helix DNA-binding domain superfamily NIY05_06880 IPR000847 Transcription regulator HTH, LysR NIY05_06880 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_06890 IPR008250 P-type ATPase, A domain superfamily NIY05_06890 IPR023298 P-type ATPase, transmembrane domain superfamily NIY05_06890 IPR018303 P-type ATPase, phosphorylation site NIY05_06890 IPR001757 P-type ATPase NIY05_06890 IPR036412 HAD-like superfamily NIY05_06890 IPR006121 Heavy metal-associated domain, HMA NIY05_06890 IPR006122 Heavy metal-associated domain, copper ion-binding NIY05_06890 IPR017969 Heavy-metal-associated, conserved site NIY05_06890 IPR023214 HAD superfamily NIY05_06890 IPR023299 P-type ATPase, cytoplasmic domain N NIY05_06890 IPR027256 P-type ATPase, subfamily IB NIY05_06890 IPR036163 Heavy metal-associated domain superfamily NIY05_06895 IPR015358 Transcription regulator MerR, DNA binding NIY05_06895 IPR011789 Cu(I)-responsive transcriptional regulator NIY05_06895 IPR009061 Putative DNA-binding domain superfamily NIY05_06895 IPR000551 MerR-type HTH domain NIY05_06930 IPR025824 OB-fold nucleic acid binding domain NIY05_06930 IPR020579 Exonuclease VII, large subunit, C-terminal NIY05_06930 IPR003753 Exonuclease VII, large subunit NIY05_06960 IPR001123 Amino acid exporter protein, LeuE-type NIY05_06965 IPR012156 Cold shock, CspA NIY05_06965 IPR011129 Cold shock domain NIY05_06965 IPR019844 Cold-shock (CSD) domain NIY05_06965 IPR002059 Cold-shock protein, DNA-binding NIY05_06965 IPR012340 Nucleic acid-binding, OB-fold NIY05_06975 IPR000304 Pyrroline-5-carboxylate reductase NIY05_06975 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain NIY05_06975 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NIY05_06975 IPR036291 NAD(P)-binding domain superfamily NIY05_06975 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal NIY05_07000 IPR011701 Major facilitator superfamily NIY05_07000 IPR020846 Major facilitator superfamily domain NIY05_07000 IPR036259 MFS transporter superfamily NIY05_07005 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_07005 IPR011991 ArsR-like helix-turn-helix domain NIY05_07005 IPR036390 Winged helix DNA-binding domain superfamily NIY05_07005 IPR002577 Helix-turn-helix, HxlR type NIY05_07030 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding NIY05_07030 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR NIY05_07030 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase NIY05_07030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_07030 IPR032678 tRNA synthetases class I, catalytic domain NIY05_07030 IPR015803 Cysteine-tRNA ligase NIY05_07035 IPR035474 KpsF-like, SIS domain NIY05_07035 IPR001347 Sugar isomerase (SIS) NIY05_07035 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type NIY05_07035 IPR000644 CBS domain NIY05_07040 IPR036412 HAD-like superfamily NIY05_07040 IPR023214 HAD superfamily NIY05_07040 IPR010023 KdsC family NIY05_07050 IPR005653 Organic solvent tolerance-like, N-terminal NIY05_07050 IPR014340 Lipopolysaccharide export system protein LptA NIY05_07055 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NIY05_07055 IPR017871 ABC transporter, conserved site NIY05_07055 IPR003439 ABC transporter-like NIY05_07055 IPR003593 AAA+ ATPase domain NIY05_07055 IPR030921 LPS export ABC transporter, ATP-binding protein LptB NIY05_07055 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_07060 IPR003423 Outer membrane efflux protein NIY05_07060 IPR010130 Type I secretion outer membrane protein, TolC NIY05_07065 IPR011527 ABC transporter type 1, transmembrane domain NIY05_07065 IPR003593 AAA+ ATPase domain NIY05_07065 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_07065 IPR003439 ABC transporter-like NIY05_07065 IPR036640 ABC transporter type 1, transmembrane domain superfamily NIY05_07065 IPR005897 Peptidase C39, ABC-type bacteriocin transporter NIY05_07065 IPR039421 Type I protein exporter NIY05_07065 IPR005074 Peptidase C39, bacteriocin processing NIY05_07065 IPR017871 ABC transporter, conserved site NIY05_07070 IPR010129 Type I secretion membrane fusion protein, HlyD family NIY05_07070 IPR006144 Secretion protein HlyD, conserved site NIY05_07075 IPR023582 Impact family NIY05_07075 IPR035647 EF-G domain III/V-like NIY05_07075 IPR001498 Impact, N-terminal NIY05_07075 IPR036956 Impact, N-terminal domain superfamily NIY05_07075 IPR020568 Ribosomal protein S5 domain 2-type fold NIY05_07075 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site NIY05_07080 IPR018357 Hexapeptide transferase, conserved site NIY05_07080 IPR011004 Trimeric LpxA-like superfamily NIY05_07080 IPR001451 Hexapeptide repeat NIY05_07090 IPR002935 Class I-like SAM-dependent O-methyltransferase NIY05_07090 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_07100 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIY05_07100 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIY05_07100 IPR000813 7Fe ferredoxin NIY05_07100 IPR022569 Ferredoxin, C-terminal NIY05_07110 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_07110 IPR036678 MutS, connector domain superfamily NIY05_07110 IPR007860 DNA mismatch repair protein MutS, connector domain NIY05_07110 IPR036187 DNA mismatch repair protein MutS, core domain superfamily NIY05_07110 IPR016151 DNA mismatch repair protein MutS, N-terminal NIY05_07110 IPR007696 DNA mismatch repair protein MutS, core NIY05_07110 IPR007861 DNA mismatch repair protein MutS, clamp NIY05_07110 IPR000432 DNA mismatch repair protein MutS, C-terminal NIY05_07110 IPR017261 DNA mismatch repair protein MutS/MSH NIY05_07110 IPR007695 DNA mismatch repair protein MutS-like, N-terminal NIY05_07110 IPR005748 DNA mismatch repair protein MutS NIY05_07115 IPR036390 Winged helix DNA-binding domain superfamily NIY05_07115 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_07115 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NIY05_07115 IPR011008 Dimeric alpha-beta barrel NIY05_07115 IPR019888 Transcription regulator AsnC-type NIY05_07115 IPR000485 AsnC-type HTH domain NIY05_07115 IPR011991 ArsR-like helix-turn-helix domain NIY05_07115 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIY05_07120 IPR000620 EamA domain NIY05_07125 IPR001633 EAL domain NIY05_07125 IPR035919 EAL domain superfamily NIY05_07125 IPR000160 GGDEF domain NIY05_07125 IPR005330 MHYT domain NIY05_07125 IPR029787 Nucleotide cyclase NIY05_07130 IPR004960 Bacterial lipid A biosynthesis acyltransferase NIY05_07130 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase NIY05_07145 IPR036259 MFS transporter superfamily NIY05_07145 IPR011701 Major facilitator superfamily NIY05_07145 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family NIY05_07145 IPR005829 Sugar transporter, conserved site NIY05_07145 IPR020846 Major facilitator superfamily domain NIY05_07165 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal NIY05_07165 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NIY05_07165 IPR036291 NAD(P)-binding domain superfamily NIY05_07165 IPR013328 6-phosphogluconate dehydrogenase, domain 2 NIY05_07165 IPR026578 L-carnitine dehydrogenase NIY05_07165 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding NIY05_07185 IPR006439 HAD hydrolase, subfamily IA NIY05_07185 IPR036412 HAD-like superfamily NIY05_07185 IPR041492 Haloacid dehalogenase-like hydrolase NIY05_07185 IPR023198 Phosphoglycolate phosphatase-like, domain 2 NIY05_07185 IPR023214 HAD superfamily NIY05_07185 IPR023733 Pyrophosphatase PpaX NIY05_07195 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein NIY05_07195 IPR037026 Vgr protein, OB-fold domain superfamily NIY05_07195 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset NIY05_07195 IPR006531 Gp5 N-terminal NIY05_07195 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal NIY05_07195 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain NIY05_07200 IPR001826 RHS protein NIY05_07200 IPR022385 Rhs repeat-associated core NIY05_07200 IPR031325 RHS repeat NIY05_07200 IPR006530 YD repeat NIY05_07215 IPR036390 Winged helix DNA-binding domain superfamily NIY05_07215 IPR000847 Transcription regulator HTH, LysR NIY05_07215 IPR005119 LysR, substrate-binding NIY05_07215 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_07220 IPR001046 NRAMP family NIY05_07225 IPR005501 LamB/YcsF/PxpA-like NIY05_07225 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel NIY05_07230 IPR016938 Uncharacterised protein family UPF0317 NIY05_07230 IPR038021 Putative hydro-lyase NIY05_07230 IPR009906 D-glutamate cyclase NIY05_07240 IPR011764 Biotin carboxylation domain NIY05_07240 IPR005482 Biotin carboxylase, C-terminal NIY05_07240 IPR000089 Biotin/lipoyl attachment NIY05_07240 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain NIY05_07240 IPR016185 Pre-ATP-grasp domain superfamily NIY05_07240 IPR011054 Rudiment single hybrid motif NIY05_07240 IPR005481 Biotin carboxylase-like, N-terminal domain NIY05_07240 IPR011761 ATP-grasp fold NIY05_07240 IPR001882 Biotin-binding site NIY05_07240 IPR011053 Single hybrid motif NIY05_07245 IPR014743 Chloride channel, core NIY05_07245 IPR001807 Chloride channel, voltage gated NIY05_07265 IPR009057 Homeobox-like domain superfamily NIY05_07265 IPR001647 DNA-binding HTH domain, TetR-type NIY05_07275 IPR011032 GroES-like superfamily NIY05_07275 IPR013149 Alcohol dehydrogenase, C-terminal NIY05_07275 IPR013154 Alcohol dehydrogenase, N-terminal NIY05_07275 IPR027399 Alcohol dehydrogenase GroES-associated NIY05_07275 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site NIY05_07275 IPR036291 NAD(P)-binding domain superfamily NIY05_07290 IPR005482 Biotin carboxylase, C-terminal NIY05_07290 IPR011764 Biotin carboxylation domain NIY05_07290 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain NIY05_07290 IPR011761 ATP-grasp fold NIY05_07290 IPR016185 Pre-ATP-grasp domain superfamily NIY05_07290 IPR005481 Biotin carboxylase-like, N-terminal domain NIY05_07290 IPR011054 Rudiment single hybrid motif NIY05_07295 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF NIY05_07295 IPR029039 Flavoprotein-like superfamily NIY05_07295 IPR003680 Flavodoxin-like fold NIY05_07315 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal NIY05_07315 IPR013321 Arc-type ribbon-helix-helix NIY05_07315 IPR002145 Ribbon-helix-helix protein, CopG NIY05_07315 IPR022988 Nickel-responsive transcriptional regulator NikR NIY05_07315 IPR010985 Ribbon-helix-helix NIY05_07315 IPR014864 Transcription factor, NikR, nickel binding C-terminal NIY05_07320 IPR023631 Amidase signature domain NIY05_07320 IPR014085 Allophanate hydrolase NIY05_07320 IPR036928 Amidase signature (AS) superfamily NIY05_07325 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NIY05_07325 IPR001320 Ionotropic glutamate receptor NIY05_07325 IPR018313 Solute-binding protein family 3, conserved site NIY05_07330 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_07330 IPR017871 ABC transporter, conserved site NIY05_07330 IPR003439 ABC transporter-like NIY05_07330 IPR003593 AAA+ ATPase domain NIY05_07355 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath NIY05_07370 IPR010272 Type VI secretion system, TssF-like NIY05_07385 IPR017731 Type VI secretion system, IcmF NIY05_07385 IPR009612 IcmF-related NIY05_07385 IPR025743 IcmF-related, N-terminal domain NIY05_07385 IPR010623 Type VI secretion system IcmF, C-terminal NIY05_07385 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_07395 IPR036737 OmpA-like domain superfamily NIY05_07395 IPR006690 Outer membrane protein, OmpA-like, conserved site NIY05_07395 IPR006665 OmpA-like domain NIY05_07395 IPR000498 Outer membrane protein OmpA-like, transmembrane domain NIY05_07395 IPR006664 Outer membrane protein, bacterial NIY05_07395 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel NIY05_07395 IPR002368 Outer membrane protein, OmpA NIY05_07410 IPR003593 AAA+ ATPase domain NIY05_07410 IPR003959 ATPase, AAA-type, core NIY05_07410 IPR017729 Type VI secretion system, ATPase ClpV1 NIY05_07410 IPR019489 Clp ATPase, C-terminal NIY05_07410 IPR036628 Clp, N-terminal domain superfamily NIY05_07410 IPR004176 Clp, N-terminal NIY05_07410 IPR001270 ClpA/B family NIY05_07410 IPR018368 ClpA/B, conserved site 1 NIY05_07410 IPR041546 ClpA/ClpB, AAA lid domain NIY05_07410 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_07415 IPR010657 ImpA, N-terminal NIY05_07415 IPR017740 Type VI secretion system-associated, ImpA NIY05_07420 IPR010263 Type VI secretion protein, VC_A0114 NIY05_07440 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain NIY05_07440 IPR005119 LysR, substrate-binding NIY05_07440 IPR000847 Transcription regulator HTH, LysR NIY05_07440 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_07440 IPR036390 Winged helix DNA-binding domain superfamily NIY05_07450 IPR002125 Cytidine and deoxycytidylate deaminase domain NIY05_07450 IPR016193 Cytidine deaminase-like NIY05_07450 IPR016192 APOBEC/CMP deaminase, zinc-binding NIY05_07455 IPR036259 MFS transporter superfamily NIY05_07455 IPR020846 Major facilitator superfamily domain NIY05_07455 IPR011701 Major facilitator superfamily NIY05_07455 IPR004747 Cyanate transport system protein NIY05_07470 IPR003828 Epoxyqueuosine reductase QueH NIY05_07485 IPR015358 Transcription regulator MerR, DNA binding NIY05_07485 IPR000551 MerR-type HTH domain NIY05_07485 IPR009061 Putative DNA-binding domain superfamily NIY05_07485 IPR010211 Redox-sensitive transcriptional activator SoxR NIY05_07495 IPR013785 Aldolase-type TIM barrel NIY05_07495 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA NIY05_07495 IPR002220 DapA-like NIY05_07495 IPR020625 Schiff base-forming aldolase, active site NIY05_07495 IPR020624 Schiff base-forming aldolase, conserved site NIY05_07505 IPR008920 Transcription regulator FadR/GntR, C-terminal NIY05_07505 IPR036390 Winged helix DNA-binding domain superfamily NIY05_07505 IPR000524 Transcription regulator HTH, GntR NIY05_07505 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_07510 IPR008794 Proline racemase family NIY05_07515 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_07515 IPR006076 FAD dependent oxidoreductase NIY05_07515 IPR023080 D-amino acid dehydrogenase DadA NIY05_07525 IPR007419 BFD-like [2Fe-2S]-binding domain NIY05_07525 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B NIY05_07525 IPR023753 FAD/NAD(P)-binding domain NIY05_07525 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily NIY05_07525 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_07535 IPR005828 Major facilitator, sugar transporter-like NIY05_07535 IPR005829 Sugar transporter, conserved site NIY05_07535 IPR036259 MFS transporter superfamily NIY05_07535 IPR020846 Major facilitator superfamily domain NIY05_07540 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_07540 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_07540 IPR015590 Aldehyde dehydrogenase domain NIY05_07540 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_07545 IPR002293 Amino acid/polyamine transporter I NIY05_07550 IPR005130 Serine dehydratase-like, alpha subunit NIY05_07550 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form NIY05_07550 IPR029009 Allosteric substrate binding domain superfamily NIY05_07550 IPR005131 Serine dehydratase beta chain NIY05_07555 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_07555 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_07555 IPR015590 Aldehyde dehydrogenase domain NIY05_07555 IPR029069 HotDog domain superfamily NIY05_07555 IPR002539 MaoC-like dehydratase domain NIY05_07555 IPR011966 Phenylacetic acid degradation protein PaaN NIY05_07555 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_07560 IPR012347 Ferritin-like NIY05_07560 IPR009078 Ferritin-like superfamily NIY05_07560 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C NIY05_07560 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A NIY05_07565 IPR009359 Phenylacetic acid degradation B NIY05_07565 IPR038693 Phenylacetyl-CoA epoxidase, subunit B NIY05_07570 IPR012347 Ferritin-like NIY05_07570 IPR009078 Ferritin-like superfamily NIY05_07570 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C NIY05_07570 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C NIY05_07575 IPR034904 Fe-S cluster assembly domain superfamily NIY05_07575 IPR002744 MIP18 family-like NIY05_07575 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit NIY05_07580 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site NIY05_07580 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit NIY05_07580 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase NIY05_07580 IPR036010 2Fe-2S ferredoxin-like superfamily NIY05_07580 IPR017938 Riboflavin synthase-like beta-barrel NIY05_07580 IPR017927 FAD-binding domain, ferredoxin reductase-type NIY05_07580 IPR001433 Oxidoreductase FAD/NAD(P)-binding NIY05_07580 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NIY05_07580 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain NIY05_07580 IPR012675 Beta-grasp domain superfamily NIY05_07580 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NIY05_07585 IPR001753 Enoyl-CoA hydratase/isomerase NIY05_07585 IPR014748 Enoyl-CoA hydratase, C-terminal NIY05_07585 IPR029045 ClpP/crotonase-like domain superfamily NIY05_07585 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site NIY05_07590 IPR001753 Enoyl-CoA hydratase/isomerase NIY05_07590 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB NIY05_07590 IPR029045 ClpP/crotonase-like domain superfamily NIY05_07590 IPR014748 Enoyl-CoA hydratase, C-terminal NIY05_07595 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NIY05_07595 IPR036291 NAD(P)-binding domain superfamily NIY05_07595 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NIY05_07595 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site NIY05_07595 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding NIY05_07595 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC NIY05_07595 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal NIY05_07600 IPR012793 Beta-ketoadipyl CoA thiolase NIY05_07600 IPR016039 Thiolase-like NIY05_07600 IPR002155 Thiolase NIY05_07600 IPR020615 Thiolase, acyl-enzyme intermediate active site NIY05_07600 IPR020610 Thiolase, active site NIY05_07600 IPR020617 Thiolase, C-terminal NIY05_07600 IPR020613 Thiolase, conserved site NIY05_07600 IPR020616 Thiolase, N-terminal NIY05_07605 IPR028154 AMP-dependent ligase, C-terminal NIY05_07605 IPR042099 AMP-dependent synthetase-like superfamily NIY05_07605 IPR011880 Phenylacetate-CoA ligase NIY05_07605 IPR000873 AMP-dependent synthetase/ligase NIY05_07610 IPR012906 PaaX-like, N-terminal NIY05_07610 IPR013225 PaaX-like, C-terminal NIY05_07610 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX NIY05_07610 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_07615 IPR023446 Carnitine operon protein CaiE NIY05_07615 IPR011004 Trimeric LpxA-like superfamily NIY05_07615 IPR001451 Hexapeptide repeat NIY05_07620 IPR003736 Phenylacetic acid degradation-related domain NIY05_07620 IPR006683 Thioesterase domain NIY05_07620 IPR029069 HotDog domain superfamily NIY05_07620 IPR011973 Phenylacetic acid degradation protein PaaD NIY05_07655 IPR018028 Catalase, mono-functional, haem-containing NIY05_07655 IPR011614 Catalase core domain NIY05_07655 IPR020835 Catalase superfamily NIY05_07655 IPR024168 Catalase, SrpA-type, predicted NIY05_07660 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase NIY05_07660 IPR016174 Di-haem cytochrome, transmembrane NIY05_07680 IPR029058 Alpha/Beta hydrolase fold NIY05_07680 IPR000073 Alpha/beta hydrolase fold-1 NIY05_07685 IPR012349 FMN-binding split barrel NIY05_07685 IPR002563 Flavin reductase like domain NIY05_07690 IPR036661 Luciferase-like domain superfamily NIY05_07690 IPR011251 Luciferase-like domain NIY05_07695 IPR015590 Aldehyde dehydrogenase domain NIY05_07695 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_07695 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NIY05_07695 IPR016160 Aldehyde dehydrogenase, cysteine active site NIY05_07695 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_07695 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_07705 IPR026030 Purine-cytosine permease Fcy2/21/22 NIY05_07705 IPR038271 Purine-cytosine permease superfamily NIY05_07705 IPR001248 Purine-cytosine permease NIY05_07715 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_07715 IPR016160 Aldehyde dehydrogenase, cysteine active site NIY05_07715 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_07715 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_07715 IPR015590 Aldehyde dehydrogenase domain NIY05_07715 IPR010102 Succinate semialdehyde dehydrogenase NIY05_07715 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NIY05_07720 IPR029032 AhpD-like NIY05_07720 IPR003779 Carboxymuconolactone decarboxylase-like NIY05_07720 IPR012788 4-carboxymuconolactone decarboxylase NIY05_07725 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_07725 IPR036390 Winged helix DNA-binding domain superfamily NIY05_07725 IPR000847 Transcription regulator HTH, LysR NIY05_07725 IPR005119 LysR, substrate-binding NIY05_07730 IPR023048 NADH-azoreductase, FMN-dependent NIY05_07730 IPR029039 Flavoprotein-like superfamily NIY05_07730 IPR003680 Flavodoxin-like fold NIY05_07735 IPR005471 Transcription regulator IclR, N-terminal NIY05_07735 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR NIY05_07735 IPR036390 Winged helix DNA-binding domain superfamily NIY05_07735 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_07735 IPR014757 Transcription regulator IclR, C-terminal NIY05_07735 IPR029016 GAF-like domain superfamily NIY05_07740 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_07740 IPR012733 4-hydroxybenzoate 3-monooxygenase NIY05_07740 IPR002938 FAD-binding domain NIY05_07745 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily NIY05_07745 IPR036390 Winged helix DNA-binding domain superfamily NIY05_07745 IPR000524 Transcription regulator HTH, GntR NIY05_07745 IPR017722 Phosphonate utilization transcriptional regulator PhnR NIY05_07745 IPR011663 UbiC transcription regulator-associated NIY05_07745 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_07750 IPR026045 Ferric binding protein NIY05_07755 IPR013611 Transport-associated OB, type 2 NIY05_07755 IPR008995 Molybdate/tungstate binding, C-terminal NIY05_07755 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_07755 IPR017871 ABC transporter, conserved site NIY05_07755 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 NIY05_07755 IPR003439 ABC transporter-like NIY05_07755 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal NIY05_07755 IPR003593 AAA+ ATPase domain NIY05_07760 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_07760 IPR035906 MetI-like superfamily NIY05_07765 IPR006076 FAD dependent oxidoreductase NIY05_07765 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_07765 IPR006281 Sarcosine oxidase, monomeric NIY05_07770 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase NIY05_07770 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_07770 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_07770 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_07770 IPR012703 2-aminoethylphosphonate--pyruvate transaminase NIY05_07770 IPR000192 Aminotransferase class V domain NIY05_07775 IPR023214 HAD superfamily NIY05_07775 IPR036412 HAD-like superfamily NIY05_07775 IPR006439 HAD hydrolase, subfamily IA NIY05_07775 IPR041492 Haloacid dehalogenase-like hydrolase NIY05_07775 IPR023198 Phosphoglycolate phosphatase-like, domain 2 NIY05_07775 IPR006323 Phosphonoacetaldehyde hydrolase NIY05_07780 IPR036259 MFS transporter superfamily NIY05_07780 IPR020846 Major facilitator superfamily domain NIY05_07780 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family NIY05_07780 IPR011701 Major facilitator superfamily NIY05_07780 IPR005829 Sugar transporter, conserved site NIY05_07785 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_07785 IPR006089 Acyl-CoA dehydrogenase, conserved site NIY05_07785 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_07785 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_07785 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_07785 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_07785 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_07790 IPR023606 CoA-transferase family III domain superfamily NIY05_07790 IPR003673 CoA-transferase family III NIY05_07795 IPR036390 Winged helix DNA-binding domain superfamily NIY05_07795 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_07795 IPR029016 GAF-like domain superfamily NIY05_07795 IPR014757 Transcription regulator IclR, C-terminal NIY05_07795 IPR005471 Transcription regulator IclR, N-terminal NIY05_07800 IPR001753 Enoyl-CoA hydratase/isomerase NIY05_07800 IPR014748 Enoyl-CoA hydratase, C-terminal NIY05_07800 IPR029045 ClpP/crotonase-like domain superfamily NIY05_07800 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB NIY05_07805 IPR013785 Aldolase-type TIM barrel NIY05_07805 IPR004136 Nitronate monooxygenase NIY05_07810 IPR011701 Major facilitator superfamily NIY05_07810 IPR036259 MFS transporter superfamily NIY05_07810 IPR020846 Major facilitator superfamily domain NIY05_07815 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_07815 IPR005471 Transcription regulator IclR, N-terminal NIY05_07815 IPR014757 Transcription regulator IclR, C-terminal NIY05_07815 IPR029016 GAF-like domain superfamily NIY05_07815 IPR036390 Winged helix DNA-binding domain superfamily NIY05_07820 IPR012793 Beta-ketoadipyl CoA thiolase NIY05_07820 IPR002155 Thiolase NIY05_07820 IPR016039 Thiolase-like NIY05_07820 IPR020615 Thiolase, acyl-enzyme intermediate active site NIY05_07820 IPR020610 Thiolase, active site NIY05_07820 IPR020617 Thiolase, C-terminal NIY05_07820 IPR020616 Thiolase, N-terminal NIY05_07820 IPR020613 Thiolase, conserved site NIY05_07825 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal NIY05_07825 IPR036291 NAD(P)-binding domain superfamily NIY05_07825 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NIY05_07825 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site NIY05_07825 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding NIY05_07825 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC NIY05_07825 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NIY05_07830 IPR036291 NAD(P)-binding domain superfamily NIY05_07830 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_07830 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_07830 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase NIY05_07835 IPR029045 ClpP/crotonase-like domain superfamily NIY05_07835 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site NIY05_07835 IPR014748 Enoyl-CoA hydratase, C-terminal NIY05_07835 IPR001753 Enoyl-CoA hydratase/isomerase NIY05_07840 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_07840 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_07840 IPR006089 Acyl-CoA dehydrogenase, conserved site NIY05_07840 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_07840 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_07840 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_07840 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_07845 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family NIY05_07845 IPR005829 Sugar transporter, conserved site NIY05_07845 IPR036259 MFS transporter superfamily NIY05_07845 IPR020846 Major facilitator superfamily domain NIY05_07845 IPR011701 Major facilitator superfamily NIY05_07850 IPR037171 NagB/RpiA transferase-like NIY05_07850 IPR004163 Coenzyme A transferase binding site NIY05_07850 IPR004165 Coenzyme A transferase family I NIY05_07850 IPR012792 3-oxoacid CoA-transferase, subunit A NIY05_07855 IPR012791 3-oxoacid CoA-transferase, subunit B NIY05_07855 IPR004164 Coenzyme A transferase active site NIY05_07855 IPR037171 NagB/RpiA transferase-like NIY05_07855 IPR004165 Coenzyme A transferase family I NIY05_07865 IPR011701 Major facilitator superfamily NIY05_07865 IPR036259 MFS transporter superfamily NIY05_07865 IPR020846 Major facilitator superfamily domain NIY05_07875 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_07875 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_07875 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_07875 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_07875 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_07875 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain NIY05_07875 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_07890 IPR036390 Winged helix DNA-binding domain superfamily NIY05_07890 IPR005119 LysR, substrate-binding NIY05_07890 IPR000847 Transcription regulator HTH, LysR NIY05_07890 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_07895 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site NIY05_07895 IPR000891 Pyruvate carboxyltransferase NIY05_07895 IPR027167 Hydroxymethylglutaryl-CoA lyase NIY05_07895 IPR013785 Aldolase-type TIM barrel NIY05_07900 IPR011054 Rudiment single hybrid motif NIY05_07900 IPR011053 Single hybrid motif NIY05_07900 IPR005481 Biotin carboxylase-like, N-terminal domain NIY05_07900 IPR013815 ATP-grasp fold, subdomain 1 NIY05_07900 IPR011761 ATP-grasp fold NIY05_07900 IPR011764 Biotin carboxylation domain NIY05_07900 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain NIY05_07900 IPR005482 Biotin carboxylase, C-terminal NIY05_07900 IPR000089 Biotin/lipoyl attachment NIY05_07900 IPR041265 Propionyl-coenzyme A carboxylase, BT domain NIY05_07900 IPR016185 Pre-ATP-grasp domain superfamily NIY05_07900 IPR001882 Biotin-binding site NIY05_07905 IPR001753 Enoyl-CoA hydratase/isomerase NIY05_07905 IPR029045 ClpP/crotonase-like domain superfamily NIY05_07905 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site NIY05_07905 IPR014748 Enoyl-CoA hydratase, C-terminal NIY05_07910 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal NIY05_07910 IPR034733 Acetyl-CoA carboxylase NIY05_07910 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal NIY05_07910 IPR029045 ClpP/crotonase-like domain superfamily NIY05_07915 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_07915 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_07915 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_07915 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_07915 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_07915 IPR006089 Acyl-CoA dehydrogenase, conserved site NIY05_07915 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_07920 IPR001647 DNA-binding HTH domain, TetR-type NIY05_07920 IPR009057 Homeobox-like domain superfamily NIY05_07925 IPR000873 AMP-dependent synthetase/ligase NIY05_07925 IPR020845 AMP-binding, conserved site NIY05_07925 IPR025110 AMP-binding enzyme, C-terminal domain NIY05_07950 IPR005119 LysR, substrate-binding NIY05_07950 IPR000847 Transcription regulator HTH, LysR NIY05_07950 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_07950 IPR036390 Winged helix DNA-binding domain superfamily NIY05_07985 IPR008135 Competence-induced protein CinA NIY05_07985 IPR036425 MoaB/Mog-like domain superfamily NIY05_07985 IPR036653 CinA-like, C-terminal NIY05_07985 IPR001453 MoaB/Mog domain NIY05_07985 IPR041424 CinA, KH domain NIY05_07985 IPR008136 CinA, C-terminal NIY05_07995 IPR024708 Catalase active site NIY05_07995 IPR018028 Catalase, mono-functional, haem-containing NIY05_07995 IPR024712 Catalase, mono-functional, haem-containing, clade 2 NIY05_07995 IPR002226 Catalase haem-binding site NIY05_07995 IPR037060 Catalase core domain superfamily NIY05_07995 IPR029062 Class I glutamine amidotransferase-like NIY05_07995 IPR020835 Catalase superfamily NIY05_07995 IPR041399 Large catalase, C-terminal domain NIY05_07995 IPR010582 Catalase immune-responsive domain NIY05_07995 IPR011614 Catalase core domain NIY05_08000 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_08000 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_08000 IPR036291 NAD(P)-binding domain superfamily NIY05_08020 IPR036286 LexA/Signal peptidase-like superfamily NIY05_08020 IPR039418 LexA-like NIY05_08020 IPR015927 Peptidase S24/S26A/S26B/S26C NIY05_08020 IPR006197 Peptidase S24, LexA-like NIY05_08030 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_08030 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NIY05_08030 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIY05_08030 IPR019888 Transcription regulator AsnC-type NIY05_08030 IPR011008 Dimeric alpha-beta barrel NIY05_08030 IPR000485 AsnC-type HTH domain NIY05_08030 IPR011991 ArsR-like helix-turn-helix domain NIY05_08030 IPR036390 Winged helix DNA-binding domain superfamily NIY05_08040 IPR035965 PAS domain superfamily NIY05_08040 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_08040 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_08040 IPR005467 Histidine kinase domain NIY05_08040 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NIY05_08040 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NIY05_08040 IPR029151 Periplasmic sensor-like domain superfamily NIY05_08040 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NIY05_08040 IPR001789 Signal transduction response regulator, receiver domain NIY05_08040 IPR015387 LuxQ, periplasmic NIY05_08040 IPR011006 CheY-like superfamily NIY05_08045 IPR011006 CheY-like superfamily NIY05_08045 IPR003607 HD/PDEase domain NIY05_08045 IPR037522 HD-GYP domain NIY05_08045 IPR001789 Signal transduction response regulator, receiver domain NIY05_08060 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain NIY05_08060 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_08060 IPR035906 MetI-like superfamily NIY05_08065 IPR035906 MetI-like superfamily NIY05_08065 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain NIY05_08065 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_08070 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type NIY05_08070 IPR003439 ABC transporter-like NIY05_08070 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_08070 IPR017871 ABC transporter, conserved site NIY05_08070 IPR003593 AAA+ ATPase domain NIY05_08075 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NIY05_08075 IPR018313 Solute-binding protein family 3, conserved site NIY05_08080 IPR001320 Ionotropic glutamate receptor NIY05_08080 IPR018313 Solute-binding protein family 3, conserved site NIY05_08080 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NIY05_08090 IPR036390 Winged helix DNA-binding domain superfamily NIY05_08090 IPR000847 Transcription regulator HTH, LysR NIY05_08090 IPR005119 LysR, substrate-binding NIY05_08090 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_08095 IPR004778 Homoserine/Threonine efflux protein NIY05_08095 IPR001123 Amino acid exporter protein, LeuE-type NIY05_08105 IPR000192 Aminotransferase class V domain NIY05_08105 IPR010970 Cysteine desulfurase, SufS NIY05_08105 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_08105 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_08105 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_08115 IPR011004 Trimeric LpxA-like superfamily NIY05_08115 IPR001451 Hexapeptide repeat NIY05_08115 IPR042122 Serine acetyltransferase, N-terminal domain superfamily NIY05_08120 IPR001763 Rhodanese-like domain NIY05_08120 IPR036873 Rhodanese-like domain superfamily NIY05_08120 IPR023695 Thiosulfate sulfurtransferase, bacterial NIY05_08125 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_08125 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_08125 IPR036291 NAD(P)-binding domain superfamily NIY05_08125 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase NIY05_08130 IPR000847 Transcription regulator HTH, LysR NIY05_08130 IPR005119 LysR, substrate-binding NIY05_08130 IPR036390 Winged helix DNA-binding domain superfamily NIY05_08130 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_08135 IPR010987 Glutathione S-transferase, C-terminal-like NIY05_08135 IPR004045 Glutathione S-transferase, N-terminal NIY05_08135 IPR036249 Thioredoxin-like superfamily NIY05_08135 IPR040079 Glutathione Transferase family NIY05_08135 IPR036282 Glutathione S-transferase, C-terminal domain superfamily NIY05_08140 IPR010987 Glutathione S-transferase, C-terminal-like NIY05_08140 IPR036282 Glutathione S-transferase, C-terminal domain superfamily NIY05_08140 IPR040079 Glutathione Transferase family NIY05_08140 IPR004045 Glutathione S-transferase, N-terminal NIY05_08140 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal NIY05_08140 IPR036249 Thioredoxin-like superfamily NIY05_08145 IPR005119 LysR, substrate-binding NIY05_08145 IPR000847 Transcription regulator HTH, LysR NIY05_08145 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_08145 IPR036390 Winged helix DNA-binding domain superfamily NIY05_08150 IPR023760 Holin-like protein CidA NIY05_08150 IPR005538 LrgA/CidA family NIY05_08155 IPR005261 Conserved hypothetical protein CHP00659 NIY05_08155 IPR007300 CidB/LrgB family NIY05_08160 IPR000524 Transcription regulator HTH, GntR NIY05_08160 IPR004839 Aminotransferase, class I/classII NIY05_08160 IPR036390 Winged helix DNA-binding domain superfamily NIY05_08160 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_08160 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_08160 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_08175 IPR011701 Major facilitator superfamily NIY05_08175 IPR020846 Major facilitator superfamily domain NIY05_08175 IPR036259 MFS transporter superfamily NIY05_08180 IPR005777 Acetyl-S-ACP:malonate ACP transferase NIY05_08180 IPR037171 NagB/RpiA transferase-like NIY05_08185 IPR002736 Triphosphoribosyl-dephospho-CoA protein NIY05_08185 IPR017555 Triphosphoribosyl-dephospho-CoA synthase NIY05_08190 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein NIY05_08190 IPR009662 Malonate decarboxylase delta subunit NIY05_08195 IPR034733 Acetyl-CoA carboxylase NIY05_08195 IPR029045 ClpP/crotonase-like domain superfamily NIY05_08195 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal NIY05_08195 IPR017556 Biotin-independent malonate decarboxylase, beta subunit NIY05_08200 IPR029045 ClpP/crotonase-like domain superfamily NIY05_08200 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit NIY05_08200 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal NIY05_08205 IPR017557 Phosphoribosyl-dephospho-CoA transferase NIY05_08210 IPR001227 Acyl transferase domain superfamily NIY05_08210 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding NIY05_08210 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase NIY05_08210 IPR024925 Malonyl CoA-acyl carrier protein transacylase NIY05_08210 IPR014043 Acyl transferase NIY05_08210 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type NIY05_08225 IPR005119 LysR, substrate-binding NIY05_08225 IPR037400 Malonate utilization transcriptional regulator, PBP2 domain NIY05_08225 IPR000847 Transcription regulator HTH, LysR NIY05_08225 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_08225 IPR036390 Winged helix DNA-binding domain superfamily NIY05_08230 IPR036390 Winged helix DNA-binding domain superfamily NIY05_08230 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_08230 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_08230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_08230 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_08230 IPR000524 Transcription regulator HTH, GntR NIY05_08230 IPR004839 Aminotransferase, class I/classII NIY05_08240 IPR003317 Cytochrome ubiquinol oxidase subunit 2 NIY05_08245 IPR002585 Cytochrome ubiquinol oxidase subunit 1 NIY05_08255 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_08255 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain NIY05_08255 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_08255 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_08255 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_08255 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_08260 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A NIY05_08260 IPR011251 Luciferase-like domain NIY05_08260 IPR036661 Luciferase-like domain superfamily NIY05_08265 IPR005829 Sugar transporter, conserved site NIY05_08265 IPR005828 Major facilitator, sugar transporter-like NIY05_08265 IPR036259 MFS transporter superfamily NIY05_08265 IPR020846 Major facilitator superfamily domain NIY05_08275 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NIY05_08275 IPR010068 Taurine ABC transporter, substrate-binding protein TauA NIY05_08275 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain NIY05_08280 IPR017871 ABC transporter, conserved site NIY05_08280 IPR003439 ABC transporter-like NIY05_08280 IPR003593 AAA+ ATPase domain NIY05_08280 IPR015859 ABC transporter, taurine import, TauD NIY05_08280 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_08285 IPR035906 MetI-like superfamily NIY05_08285 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_08290 IPR003819 TauD/TfdA-like domain NIY05_08290 IPR042098 Taurine dioxygenase TauD-like superfamily NIY05_08290 IPR006189 CHASE domain NIY05_08295 IPR015942 Asp/Glu/hydantoin racemase NIY05_08300 IPR012681 Nucleobase cation symporter-1, NCS1 NIY05_08300 IPR001248 Purine-cytosine permease NIY05_08300 IPR038271 Purine-cytosine permease superfamily NIY05_08310 IPR005119 LysR, substrate-binding NIY05_08310 IPR000847 Transcription regulator HTH, LysR NIY05_08310 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_08310 IPR036390 Winged helix DNA-binding domain superfamily NIY05_08320 IPR026912 Adenine deaminase C-terminal domain NIY05_08320 IPR006679 Adenine deaminase NIY05_08320 IPR011059 Metal-dependent hydrolase, composite domain superfamily NIY05_08320 IPR032466 Metal-dependent hydrolase NIY05_08320 IPR006680 Amidohydrolase-related NIY05_08330 IPR006659 Arsenate reductase NIY05_08330 IPR006660 Arsenate reductase-like NIY05_08330 IPR036249 Thioredoxin-like superfamily NIY05_08335 IPR011991 ArsR-like helix-turn-helix domain NIY05_08335 IPR036390 Winged helix DNA-binding domain superfamily NIY05_08335 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_08335 IPR001845 HTH ArsR-type DNA-binding domain NIY05_08340 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 NIY05_08340 IPR004706 Arsenical-resistance protein Acr3 NIY05_08340 IPR038770 Sodium/solute symporter superfamily NIY05_08345 IPR036390 Winged helix DNA-binding domain superfamily NIY05_08345 IPR000847 Transcription regulator HTH, LysR NIY05_08345 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_08345 IPR005119 LysR, substrate-binding NIY05_08360 IPR036249 Thioredoxin-like superfamily NIY05_08360 IPR012336 Thioredoxin-like fold NIY05_08360 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site NIY05_08360 IPR002109 Glutaredoxin NIY05_08360 IPR012081 Alkyl hydroperoxide reductase subunit F NIY05_08360 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_08360 IPR023753 FAD/NAD(P)-binding domain NIY05_08375 IPR001451 Hexapeptide repeat NIY05_08375 IPR018357 Hexapeptide transferase, conserved site NIY05_08375 IPR011004 Trimeric LpxA-like superfamily NIY05_08375 IPR005881 Serine O-acetyltransferase NIY05_08375 IPR042122 Serine acetyltransferase, N-terminal domain superfamily NIY05_08380 IPR004384 RNA methyltransferase TrmJ/LasT NIY05_08380 IPR001537 tRNA/rRNA methyltransferase, SpoU type NIY05_08380 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NIY05_08380 IPR029028 Alpha/beta knot methyltransferases NIY05_08385 IPR004805 DNA polymerase III, alpha subunit NIY05_08385 IPR016195 Polymerase/histidinol phosphatase-like NIY05_08385 IPR003141 Polymerase/histidinol phosphatase, N-terminal NIY05_08385 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type NIY05_08385 IPR029460 DNA polymerase, helix-hairpin-helix motif NIY05_08385 IPR040982 DNA polymerase III alpha subunit finger domain NIY05_08385 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain NIY05_08385 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain NIY05_08385 IPR004013 PHP domain NIY05_08390 IPR040919 Asparaginase/glutaminase, C-terminal NIY05_08390 IPR004550 L-asparaginase, type II NIY05_08390 IPR006034 Asparaginase/glutaminase-like NIY05_08390 IPR020827 Asparaginase/glutaminase, active site 1 NIY05_08390 IPR027475 Asparaginase/glutaminase, active site 2 NIY05_08390 IPR027473 L-asparaginase, C-terminal NIY05_08390 IPR036152 Asparaginase/glutaminase-like superfamily NIY05_08390 IPR037152 L-asparaginase, N-terminal domain superfamily NIY05_08390 IPR027474 L-asparaginase, N-terminal NIY05_08395 IPR023954 C4-dicarboxylate transport protein NIY05_08395 IPR001991 Sodium:dicarboxylate symporter NIY05_08395 IPR018107 Sodium:dicarboxylate symporter, conserved site NIY05_08395 IPR036458 Sodium:dicarboxylate symporter superfamily NIY05_08400 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_08400 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_08400 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_08400 IPR004839 Aminotransferase, class I/classII NIY05_08405 IPR011057 Mss4-like superfamily NIY05_08405 IPR028427 Peptide methionine sulfoxide reductase NIY05_08405 IPR002579 Peptide methionine sulphoxide reductase MrsB NIY05_08410 IPR036249 Thioredoxin-like superfamily NIY05_08410 IPR029760 Glutathione peroxidase conserved site NIY05_08410 IPR029759 Glutathione peroxidase active site NIY05_08410 IPR000889 Glutathione peroxidase NIY05_08415 IPR009057 Homeobox-like domain superfamily NIY05_08415 IPR018060 DNA binding HTH domain, AraC-type NIY05_08415 IPR020449 Transcription regulator HTH, AraC- type NIY05_08415 IPR014710 RmlC-like jelly roll fold NIY05_08415 IPR032783 AraC-type transcription regulator, ligand-binding domain NIY05_08415 IPR011051 RmlC-like cupin domain superfamily NIY05_08425 IPR004839 Aminotransferase, class I/classII NIY05_08425 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ NIY05_08425 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_08425 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_08425 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_08430 IPR002934 Polymerase, nucleotidyl transferase domain NIY05_08430 IPR002912 ACT domain NIY05_08430 IPR003607 HD/PDEase domain NIY05_08430 IPR006674 HD domain NIY05_08430 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase NIY05_08430 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme NIY05_08435 IPR011054 Rudiment single hybrid motif NIY05_08435 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type NIY05_08435 IPR013815 ATP-grasp fold, subdomain 1 NIY05_08435 IPR016185 Pre-ATP-grasp domain superfamily NIY05_08435 IPR011761 ATP-grasp fold NIY05_08435 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase NIY05_08445 IPR008407 Branched-chain amino acid transport, AzlD NIY05_08450 IPR011606 Branched-chain amino acid transport, permease NIY05_08475 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 NIY05_08475 IPR012675 Beta-grasp domain superfamily NIY05_08475 IPR004095 TGS NIY05_08475 IPR012676 TGS-like NIY05_08475 IPR023192 TGS-like domain superfamily NIY05_08475 IPR013029 YchF, C-terminal domain NIY05_08475 IPR041706 YchF, N-terminal NIY05_08475 IPR031167 OBG-type guanine nucleotide-binding (G) domain NIY05_08475 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_08475 IPR006073 GTP binding domain NIY05_08480 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_08480 IPR035906 MetI-like superfamily NIY05_08485 IPR003593 AAA+ ATPase domain NIY05_08485 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_08485 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain NIY05_08485 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal NIY05_08485 IPR017871 ABC transporter, conserved site NIY05_08485 IPR003439 ABC transporter-like NIY05_08485 IPR026253 Methionine import ATP-binding protein MetN NIY05_08485 IPR018449 NIL domain NIY05_08490 IPR004872 Lipoprotein NlpA family NIY05_08495 IPR004872 Lipoprotein NlpA family NIY05_08500 IPR011251 Luciferase-like domain NIY05_08500 IPR036661 Luciferase-like domain superfamily NIY05_08500 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A NIY05_08510 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain NIY05_08510 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_08510 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_08510 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_08510 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_08525 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain NIY05_08525 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ NIY05_08525 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_08525 IPR035906 MetI-like superfamily NIY05_08530 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM NIY05_08530 IPR035906 MetI-like superfamily NIY05_08530 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_08530 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain NIY05_08535 IPR003439 ABC transporter-like NIY05_08535 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type NIY05_08535 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_08535 IPR017871 ABC transporter, conserved site NIY05_08535 IPR003593 AAA+ ATPase domain NIY05_08550 IPR000485 AsnC-type HTH domain NIY05_08550 IPR011008 Dimeric alpha-beta barrel NIY05_08550 IPR019888 Transcription regulator AsnC-type NIY05_08550 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIY05_08550 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NIY05_08550 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_08550 IPR036390 Winged helix DNA-binding domain superfamily NIY05_08550 IPR011991 ArsR-like helix-turn-helix domain NIY05_08555 IPR029072 YebC-like NIY05_08555 IPR026564 Transcriptional regulator TACO1-like, domain 3 NIY05_08555 IPR017856 Integrase-like, N-terminal NIY05_08555 IPR002876 Transcriptional regulator TACO1-like NIY05_08565 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NIY05_08565 IPR009057 Homeobox-like domain superfamily NIY05_08565 IPR001647 DNA-binding HTH domain, TetR-type NIY05_08585 IPR036390 Winged helix DNA-binding domain superfamily NIY05_08585 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_08585 IPR005119 LysR, substrate-binding NIY05_08585 IPR000847 Transcription regulator HTH, LysR NIY05_08595 IPR038271 Purine-cytosine permease superfamily NIY05_08595 IPR026030 Purine-cytosine permease Fcy2/21/22 NIY05_08595 IPR001248 Purine-cytosine permease NIY05_08605 IPR000620 EamA domain NIY05_08625 IPR025949 PapC-like, C-terminal domain NIY05_08625 IPR037224 PapC, N-terminal domain superfamily NIY05_08625 IPR025885 PapC, N-terminal domain NIY05_08625 IPR042186 Outer membrane usher protein FimD, plug domain NIY05_08625 IPR018030 Fimbrial membrane usher, conserved site NIY05_08625 IPR000015 Outer membrane usher protein NIY05_08630 IPR036316 Pili assembly chaperone, C-terminal domain superfamily NIY05_08630 IPR001829 Pili assembly chaperone, bacterial NIY05_08630 IPR016148 Pili assembly chaperone, C-terminal NIY05_08630 IPR018046 Pili assembly chaperone, conserved site NIY05_08630 IPR016147 Pili assembly chaperone, N-terminal NIY05_08630 IPR013783 Immunoglobulin-like fold NIY05_08630 IPR008962 PapD-like superfamily NIY05_08635 IPR008966 Adhesion domain superfamily NIY05_08635 IPR039458 FimA-like NIY05_08635 IPR036937 Fimbrial-type adhesion domain superfamily NIY05_08650 IPR007197 Radical SAM NIY05_08650 IPR013785 Aldolase-type TIM barrel NIY05_08650 IPR024177 Biotin synthase NIY05_08650 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB NIY05_08650 IPR010722 Biotin and thiamin synthesis-associated domain NIY05_08650 IPR006638 Elp3/MiaB/NifB NIY05_08655 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIY05_08655 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIY05_08655 IPR013542 Domain of unknown function DUF1730 NIY05_08655 IPR009051 Alpha-helical ferredoxin NIY05_08655 IPR004453 Epoxyqueuosine reductase QueG NIY05_08660 IPR036652 YjeF N-terminal domain superfamily NIY05_08660 IPR004443 YjeF N-terminal domain NIY05_08660 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase NIY05_08660 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr NIY05_08660 IPR029056 Ribokinase-like NIY05_08665 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site NIY05_08665 IPR012337 Ribonuclease H-like superfamily NIY05_08665 IPR036397 Ribonuclease H superfamily NIY05_08665 IPR002176 Crossover junction endodeoxyribonuclease RuvC NIY05_08675 IPR000182 GNAT domain NIY05_08675 IPR016181 Acyl-CoA N-acyltransferase NIY05_08680 IPR012338 Beta-lactamase/transpeptidase-like NIY05_08680 IPR001460 Penicillin-binding protein, transpeptidase NIY05_08700 IPR002133 S-adenosylmethionine synthetase NIY05_08700 IPR022636 S-adenosylmethionine synthetase superfamily NIY05_08700 IPR022628 S-adenosylmethionine synthetase, N-terminal NIY05_08700 IPR022630 S-adenosylmethionine synthetase, C-terminal NIY05_08700 IPR022629 S-adenosylmethionine synthetase, central domain NIY05_08700 IPR022631 S-adenosylmethionine synthetase, conserved site NIY05_08705 IPR029061 Thiamin diphosphate-binding fold NIY05_08705 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II NIY05_08705 IPR005475 Transketolase-like, pyrimidine-binding domain NIY05_08705 IPR005478 Transketolase, bacterial-like NIY05_08705 IPR020826 Transketolase binding site NIY05_08705 IPR033248 Transketolase, C-terminal domain NIY05_08705 IPR033247 Transketolase family NIY05_08705 IPR005474 Transketolase, N-terminal NIY05_08715 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NIY05_08715 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily NIY05_08715 IPR023480 Uncharacterised protein family UPF0312/YceI NIY05_08725 IPR018711 Phosphodiester glycosidase NIY05_08735 IPR030390 RNA methyltransferase TrmA, active site NIY05_08735 IPR030391 RNA methyltransferase TrmA, conserved site NIY05_08735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_08735 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA NIY05_08735 IPR010280 (Uracil-5)-methyltransferase family NIY05_08740 IPR007344 GrpB/Dephospho-CoA kinase NIY05_08745 IPR010985 Ribbon-helix-helix NIY05_08745 IPR002872 Proline dehydrogenase domain NIY05_08745 IPR024082 Proline dehydrogenase PutA, domain II NIY05_08745 IPR024089 Proline dehydrogenase PutA, domain I/II NIY05_08745 IPR024090 Proline dehydrogenase PutA, domain I NIY05_08745 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain NIY05_08745 IPR029041 FAD-linked oxidoreductase-like NIY05_08745 IPR025703 Bifunctional protein PutA NIY05_08745 IPR013321 Arc-type ribbon-helix-helix NIY05_08745 IPR015590 Aldehyde dehydrogenase domain NIY05_08745 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_08745 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NIY05_08745 IPR016160 Aldehyde dehydrogenase, cysteine active site NIY05_08745 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_08745 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_08745 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 NIY05_08750 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIY05_08750 IPR036390 Winged helix DNA-binding domain superfamily NIY05_08750 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_08750 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NIY05_08750 IPR011008 Dimeric alpha-beta barrel NIY05_08750 IPR000485 AsnC-type HTH domain NIY05_08750 IPR011991 ArsR-like helix-turn-helix domain NIY05_08750 IPR019888 Transcription regulator AsnC-type NIY05_08755 IPR018212 Sodium/solute symporter, conserved site NIY05_08755 IPR038377 Sodium/glucose symporter superfamily NIY05_08755 IPR011851 Sodium/proline symporter NIY05_08755 IPR001734 Sodium/solute symporter NIY05_08760 IPR026591 Sirtuin, catalytic core small domain superfamily NIY05_08760 IPR027546 Sirtuin, class III NIY05_08760 IPR029035 DHS-like NAD/FAD-binding domain superfamily NIY05_08760 IPR003000 Sirtuin family NIY05_08760 IPR026590 Sirtuin family, catalytic core domain NIY05_08765 IPR011053 Single hybrid motif NIY05_08765 IPR017453 Glycine cleavage system H-protein, subgroup NIY05_08765 IPR000089 Biotin/lipoyl attachment NIY05_08765 IPR002930 Glycine cleavage system H-protein NIY05_08765 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NIY05_08765 IPR033753 Glycine cleavage system H-protein/Simiate NIY05_08770 IPR018060 DNA binding HTH domain, AraC-type NIY05_08770 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal NIY05_08770 IPR020449 Transcription regulator HTH, AraC- type NIY05_08770 IPR009057 Homeobox-like domain superfamily NIY05_08780 IPR036640 ABC transporter type 1, transmembrane domain superfamily NIY05_08780 IPR011527 ABC transporter type 1, transmembrane domain NIY05_08780 IPR039421 Type I protein exporter NIY05_08780 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_08780 IPR003593 AAA+ ATPase domain NIY05_08780 IPR003439 ABC transporter-like NIY05_08780 IPR017871 ABC transporter, conserved site NIY05_08785 IPR018636 Protein of unknown function DUF2058 NIY05_08790 IPR010699 Protein of unknown function DUF1275 NIY05_08795 IPR001991 Sodium:dicarboxylate symporter NIY05_08795 IPR036458 Sodium:dicarboxylate symporter superfamily NIY05_08795 IPR023025 Serine/threonine transporter SstT NIY05_08800 IPR011991 ArsR-like helix-turn-helix domain NIY05_08800 IPR001845 HTH ArsR-type DNA-binding domain NIY05_08800 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_08800 IPR036390 Winged helix DNA-binding domain superfamily NIY05_08820 IPR003347 JmjC domain NIY05_08820 IPR039994 JmjC domain-containing NIY05_08825 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein NIY05_08825 IPR029001 Inosine triphosphate pyrophosphatase-like NIY05_08835 IPR001576 Phosphoglycerate kinase NIY05_08835 IPR015911 Phosphoglycerate kinase, conserved site NIY05_08835 IPR015824 Phosphoglycerate kinase, N-terminal NIY05_08835 IPR036043 Phosphoglycerate kinase superfamily NIY05_08845 IPR013785 Aldolase-type TIM barrel NIY05_08845 IPR000771 Fructose-bisphosphate aldolase, class-II NIY05_08845 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype NIY05_08850 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type NIY05_08850 IPR023034 Peptidyl-prolyl isomerase SurA NIY05_08850 IPR015391 SurA N-terminal NIY05_08850 IPR027304 Trigger factor/SurA domain superfamily NIY05_08855 IPR005653 Organic solvent tolerance-like, N-terminal NIY05_08855 IPR020889 LPS-assembly protein LptD NIY05_08855 IPR007543 LptD, C-terminal NIY05_08860 IPR002575 Aminoglycoside phosphotransferase NIY05_08860 IPR011009 Protein kinase-like domain superfamily NIY05_08865 IPR005835 Nucleotidyl transferase domain NIY05_08865 IPR029044 Nucleotide-diphospho-sugar transferases NIY05_08870 IPR003682 rRNA small subunit methyltransferase G NIY05_08870 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_08875 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_08875 IPR025669 AAA domain NIY05_08880 IPR041468 ParB/Spo0J, HTH domain NIY05_08880 IPR004437 ParB/RepB/Spo0J partition protein NIY05_08880 IPR003115 ParB/Sulfiredoxin NIY05_08880 IPR036086 ParB/Sulfiredoxin superfamily NIY05_08885 IPR002898 MotA/TolQ/ExbB proton channel NIY05_08895 IPR039421 Type I protein exporter NIY05_08895 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_08895 IPR011917 ABC transporter, lipid A export, MsbA NIY05_08895 IPR003593 AAA+ ATPase domain NIY05_08895 IPR003439 ABC transporter-like NIY05_08895 IPR036640 ABC transporter type 1, transmembrane domain superfamily NIY05_08895 IPR011527 ABC transporter type 1, transmembrane domain NIY05_08895 IPR017871 ABC transporter, conserved site NIY05_08900 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_08900 IPR003758 Tetraacyldisaccharide 4'-kinase NIY05_08905 IPR003329 Acylneuraminate cytidylyltransferase NIY05_08905 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase NIY05_08905 IPR029044 Nucleotide-diphospho-sugar transferases NIY05_08910 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_08910 IPR015199 DNA polymerase III, delta subunit, C-terminal NIY05_08910 IPR004622 DNA polymerase III, delta prime subunit NIY05_08920 IPR001130 TatD family NIY05_08920 IPR018228 Deoxyribonuclease, TatD-related, conserved site NIY05_08920 IPR015991 Uncharacterised hydrolase TatD-type NIY05_08920 IPR032466 Metal-dependent hydrolase NIY05_08935 IPR012902 Prokaryotic N-terminal methylation site NIY05_08935 IPR003413 Type II secretion system protein I domain NIY05_08935 IPR010052 Type II secretion system protein I NIY05_08940 IPR012902 Prokaryotic N-terminal methylation site NIY05_08940 IPR010055 Type II secretion system protein J NIY05_08945 IPR005628 General secretion pathway protein K NIY05_08945 IPR038072 GspK, central domain superfamily NIY05_08955 IPR036895 Uracil-DNA glycosylase-like domain superfamily NIY05_08955 IPR005122 Uracil-DNA glycosylase-like NIY05_08955 IPR018085 Uracil-DNA glycosylase, active site NIY05_08955 IPR002043 Uracil-DNA glycosylase family 1 NIY05_08965 IPR002125 Cytidine and deoxycytidylate deaminase domain NIY05_08965 IPR016193 Cytidine deaminase-like NIY05_08965 IPR028883 tRNA-specific adenosine deaminase NIY05_08965 IPR016192 APOBEC/CMP deaminase, zinc-binding NIY05_08975 IPR003136 Cytidylate kinase NIY05_08975 IPR011994 Cytidylate kinase domain NIY05_08975 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_08980 IPR012340 Nucleic acid-binding, OB-fold NIY05_08980 IPR000110 Ribosomal protein S1 NIY05_08980 IPR022967 RNA-binding domain, S1 NIY05_08980 IPR003029 S1 domain NIY05_08985 IPR005685 Integration host factor, beta subunit NIY05_08985 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily NIY05_08985 IPR000119 Histone-like DNA-binding protein NIY05_08985 IPR020816 Histone-like DNA-binding protein, conserved site NIY05_08995 IPR013785 Aldolase-type TIM barrel NIY05_08995 IPR014732 Orotidine 5'-phosphate decarboxylase NIY05_08995 IPR018089 Orotidine 5'-phosphate decarboxylase, active site NIY05_08995 IPR001754 Orotidine 5'-phosphate decarboxylase domain NIY05_08995 IPR011060 Ribulose-phosphate binding barrel NIY05_09005 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_09005 IPR020946 Flavin monooxygenase-like NIY05_09015 IPR005654 ATPase, AFG1-like NIY05_09015 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_09015 IPR030870 Cell division protein ZapE NIY05_09020 IPR001465 Malate synthase NIY05_09020 IPR006253 Malate synthase G NIY05_09020 IPR011076 Malate synthase-like superfamily NIY05_09020 IPR023310 Malate synthase G, beta sub-domain NIY05_09030 IPR003400 Biopolymer transport protein ExbD/TolR NIY05_09035 IPR003400 Biopolymer transport protein ExbD/TolR NIY05_09040 IPR002898 MotA/TolQ/ExbB proton channel NIY05_09050 IPR010101 TonB-dependent vitamin B12 transporter BtuB NIY05_09050 IPR039426 Vitamin B12 transporter BtuB-like NIY05_09050 IPR012910 TonB-dependent receptor, plug domain NIY05_09050 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_09050 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_09050 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NIY05_09050 IPR010917 TonB-dependent receptor, conserved site NIY05_09070 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 NIY05_09070 IPR001567 Peptidase M3A/M3B catalytic domain NIY05_09075 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_09075 IPR035906 MetI-like superfamily NIY05_09080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_09080 IPR035906 MetI-like superfamily NIY05_09085 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_09085 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal NIY05_09085 IPR017871 ABC transporter, conserved site NIY05_09085 IPR003439 ABC transporter-like NIY05_09085 IPR003593 AAA+ ATPase domain NIY05_09100 IPR020550 Inositol monophosphatase, conserved site NIY05_09100 IPR000760 Inositol monophosphatase-like NIY05_09100 IPR020583 Inositol monophosphatase, metal-binding site NIY05_09100 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ NIY05_09110 IPR036510 Ribosomal protein S20 superfamily NIY05_09110 IPR002583 Ribosomal protein S20 NIY05_09115 IPR000534 Semialdehyde dehydrogenase, NAD-binding NIY05_09115 IPR036291 NAD(P)-binding domain superfamily NIY05_09115 IPR016040 NAD(P)-binding domain NIY05_09120 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily NIY05_09120 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NIY05_09120 IPR010203 Regulator of ribonuclease activity A NIY05_09150 IPR005118 Transcription-repair-coupling factor, C-terminal domain NIY05_09150 IPR037235 TRCF-like, C-terminal domain NIY05_09150 IPR041471 UvrB, interaction domain NIY05_09150 IPR004576 Transcription-repair coupling factor NIY05_09150 IPR001650 Helicase, C-terminal NIY05_09150 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIY05_09150 IPR011545 DEAD/DEAH box helicase domain NIY05_09150 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_09150 IPR003711 CarD-like/TRCF domain NIY05_09150 IPR036101 CarD-like/TRCF domain superfamily NIY05_09160 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase NIY05_09160 IPR029787 Nucleotide cyclase NIY05_09165 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NIY05_09165 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria NIY05_09165 IPR036010 2Fe-2S ferredoxin-like superfamily NIY05_09165 IPR001055 Adrenodoxin NIY05_09165 IPR018298 Adrenodoxin, iron-sulphur binding site NIY05_09165 IPR012675 Beta-grasp domain superfamily NIY05_09170 IPR013126 Heat shock protein 70 family NIY05_09170 IPR010236 ISC system FeS cluster assembly, HscA chaperone NIY05_09170 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily NIY05_09170 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily NIY05_09170 IPR018181 Heat shock protein 70, conserved site NIY05_09170 IPR042039 HscA chaperone, nucleotide-binding domain NIY05_09175 IPR036869 Chaperone J-domain superfamily NIY05_09175 IPR001623 DnaJ domain NIY05_09175 IPR004640 Co-chaperone Hsc20 NIY05_09175 IPR036386 HscB, C-terminal domain superfamily NIY05_09175 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain NIY05_09180 IPR011302 Iron-binding protein IscA, proteobacteria NIY05_09180 IPR035903 HesB-like domain superfamily NIY05_09180 IPR017870 FeS cluster insertion, C-terminal, conserved site NIY05_09180 IPR000361 FeS cluster biogenesis NIY05_09180 IPR016092 FeS cluster insertion protein NIY05_09185 IPR011339 ISC system FeS cluster assembly, IscU scaffold NIY05_09185 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal NIY05_09190 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_09190 IPR000192 Aminotransferase class V domain NIY05_09190 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site NIY05_09190 IPR010240 Cysteine desulfurase IscS NIY05_09190 IPR016454 Cysteine desulfurase NIY05_09190 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_09190 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_09195 IPR036390 Winged helix DNA-binding domain superfamily NIY05_09195 IPR000944 Transcription regulator Rrf2-type NIY05_09195 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_09195 IPR010242 Transcription factor HTH, IscR NIY05_09195 IPR030489 Transcription regulator Rrf2-type, conserved site NIY05_09210 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily NIY05_09210 IPR000119 Histone-like DNA-binding protein NIY05_09210 IPR020816 Histone-like DNA-binding protein, conserved site NIY05_09215 IPR015391 SurA N-terminal NIY05_09215 IPR023034 Peptidyl-prolyl isomerase SurA NIY05_09215 IPR027304 Trigger factor/SurA domain superfamily NIY05_09215 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type NIY05_09215 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site NIY05_09220 IPR032783 AraC-type transcription regulator, ligand-binding domain NIY05_09220 IPR020449 Transcription regulator HTH, AraC- type NIY05_09220 IPR011051 RmlC-like cupin domain superfamily NIY05_09220 IPR014710 RmlC-like jelly roll fold NIY05_09220 IPR018062 HTH domain AraC-type, conserved site NIY05_09220 IPR018060 DNA binding HTH domain, AraC-type NIY05_09220 IPR009057 Homeobox-like domain superfamily NIY05_09225 IPR033885 Alkane/xylene monooxygenase NIY05_09225 IPR005804 Fatty acid desaturase domain NIY05_09230 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_09230 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_09230 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_09230 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_09230 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_09230 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_09230 IPR006089 Acyl-CoA dehydrogenase, conserved site NIY05_09235 IPR006089 Acyl-CoA dehydrogenase, conserved site NIY05_09235 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_09235 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_09235 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_09235 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_09235 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_09235 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_09240 IPR004147 UbiB domain NIY05_09240 IPR011009 Protein kinase-like domain superfamily NIY05_09250 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC NIY05_09250 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain NIY05_09250 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily NIY05_09255 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like NIY05_09255 IPR022770 Ferric iron reductase FhuF domain NIY05_09255 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal NIY05_09260 IPR031043 Putative histamine N-monooxygenase NIY05_09260 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase NIY05_09260 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_09265 IPR004638 Drug resistance transporter EmrB-like NIY05_09265 IPR011701 Major facilitator superfamily NIY05_09265 IPR020846 Major facilitator superfamily domain NIY05_09265 IPR036259 MFS transporter superfamily NIY05_09270 IPR022770 Ferric iron reductase FhuF domain NIY05_09270 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal NIY05_09270 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like NIY05_09275 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like NIY05_09275 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal NIY05_09275 IPR022770 Ferric iron reductase FhuF domain NIY05_09290 IPR010917 TonB-dependent receptor, conserved site NIY05_09290 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NIY05_09290 IPR010105 TonB-dependent siderophore receptor NIY05_09290 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_09290 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_09290 IPR012910 TonB-dependent receptor, plug domain NIY05_09290 IPR039426 Vitamin B12 transporter BtuB-like NIY05_09290 IPR010916 TonB box, conserved site NIY05_09315 IPR023198 Phosphoglycolate phosphatase-like, domain 2 NIY05_09315 IPR023214 HAD superfamily NIY05_09315 IPR036412 HAD-like superfamily NIY05_09315 IPR006439 HAD hydrolase, subfamily IA NIY05_09315 IPR010976 Beta-phosphoglucomutase hydrolase NIY05_09315 IPR041492 Haloacid dehalogenase-like hydrolase NIY05_09325 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase NIY05_09325 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_09330 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like NIY05_09330 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal NIY05_09330 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic NIY05_09330 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily NIY05_09345 IPR003805 Adenosylcobinamide-GDP ribazoletransferase NIY05_09350 IPR013785 Aldolase-type TIM barrel NIY05_09350 IPR006218 DAHP synthetase I/KDSA NIY05_09350 IPR006219 DHAP synthase, class 1 NIY05_09355 IPR002781 Transmembrane protein TauE-like NIY05_09375 IPR039423 TonB-dependent receptor-like NIY05_09375 IPR010917 TonB-dependent receptor, conserved site NIY05_09375 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NIY05_09375 IPR010105 TonB-dependent siderophore receptor NIY05_09375 IPR010916 TonB box, conserved site NIY05_09375 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_09375 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_09375 IPR012910 TonB-dependent receptor, plug domain NIY05_09380 IPR003835 Glycosyl transferase, family 19 NIY05_09390 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIY05_09395 IPR003439 ABC transporter-like NIY05_09395 IPR017871 ABC transporter, conserved site NIY05_09395 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_09395 IPR003593 AAA+ ATPase domain NIY05_09400 IPR000412 ABC-2 transporter NIY05_09405 IPR000412 ABC-2 transporter NIY05_09430 IPR001310 Histidine triad (HIT) protein NIY05_09430 IPR011146 HIT-like domain NIY05_09430 IPR036265 HIT-like superfamily NIY05_09430 IPR019808 Histidine triad, conserved site NIY05_09430 IPR039384 HINT family NIY05_09460 IPR013216 Methyltransferase type 11 NIY05_09460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_09465 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit NIY05_09465 IPR000073 Alpha/beta hydrolase fold-1 NIY05_09465 IPR029058 Alpha/Beta hydrolase fold NIY05_09470 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_09470 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_09470 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_09470 IPR006234 O-succinylhomoserine sulfhydrylase NIY05_09470 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme NIY05_09480 IPR004401 Nucleoid-associated protein YbaB/EbfC family NIY05_09480 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily NIY05_09485 IPR034137 RecR, TOPRIM domain NIY05_09485 IPR006171 TOPRIM domain NIY05_09485 IPR000093 DNA recombination protein RecR NIY05_09485 IPR023628 Recombination protein RecR, C4-type zinc finger NIY05_09485 IPR023627 Recombination protein RecR NIY05_09485 IPR015967 Recombination protein RecR, conserved site NIY05_09490 IPR002562 3'-5' exonuclease domain NIY05_09490 IPR010997 HRDC-like superfamily NIY05_09490 IPR002121 HRDC domain NIY05_09490 IPR006292 Ribonuclease D NIY05_09490 IPR012337 Ribonuclease H-like superfamily NIY05_09490 IPR036397 Ribonuclease H superfamily NIY05_09510 IPR038068 YcgL-like superfamily NIY05_09510 IPR027354 YcgL domain NIY05_09520 IPR003593 AAA+ ATPase domain NIY05_09520 IPR041569 AAA ATPase, AAA+ lid domain NIY05_09520 IPR003959 ATPase, AAA-type, core NIY05_09520 IPR005936 Peptidase, FtsH NIY05_09520 IPR000642 Peptidase M41 NIY05_09520 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_09520 IPR037219 Peptidase M41-like NIY05_09530 IPR006654 Tryptophan synthase, beta chain NIY05_09530 IPR006653 Tryptophan synthase, beta chain, conserved site NIY05_09530 IPR001926 Pyridoxal-phosphate dependent enzyme NIY05_09530 IPR023026 Tryptophan synthase beta chain/beta chain-like NIY05_09530 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIY05_09535 IPR007848 Methyltransferase small domain NIY05_09535 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_09535 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase NIY05_09535 IPR004556 Methyltransferase HemK-like NIY05_09535 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NIY05_09540 IPR020541 Chorismate synthase, conserved site NIY05_09540 IPR035904 Chorismate synthase AroC superfamily NIY05_09540 IPR000453 Chorismate synthase NIY05_09545 IPR013656 PAS fold-4 NIY05_09545 IPR035965 PAS domain superfamily NIY05_09545 IPR000160 GGDEF domain NIY05_09545 IPR029787 Nucleotide cyclase NIY05_09545 IPR000014 PAS domain NIY05_09545 IPR000700 PAS-associated, C-terminal NIY05_09560 IPR007197 Radical SAM NIY05_09560 IPR006638 Elp3/MiaB/NifB NIY05_09560 IPR013785 Aldolase-type TIM barrel NIY05_09560 IPR003698 Lipoyl synthase NIY05_09565 IPR001017 Dehydrogenase, E1 component NIY05_09565 IPR029061 Thiamin diphosphate-binding fold NIY05_09570 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II NIY05_09570 IPR005475 Transketolase-like, pyrimidine-binding domain NIY05_09570 IPR033248 Transketolase, C-terminal domain NIY05_09570 IPR029061 Thiamin diphosphate-binding fold NIY05_09575 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NIY05_09575 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain NIY05_09575 IPR000089 Biotin/lipoyl attachment NIY05_09575 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily NIY05_09575 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex NIY05_09575 IPR004167 Peripheral subunit-binding domain NIY05_09575 IPR011053 Single hybrid motif NIY05_09575 IPR036625 E3-binding domain superfamily NIY05_09580 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_09580 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I NIY05_09580 IPR006258 Dihydrolipoamide dehydrogenase NIY05_09580 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIY05_09580 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site NIY05_09580 IPR023753 FAD/NAD(P)-binding domain NIY05_09580 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily NIY05_09585 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_09585 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_09585 IPR036291 NAD(P)-binding domain superfamily NIY05_09585 IPR014007 Acetoin reductase NIY05_09590 IPR020843 Polyketide synthase, enoylreductase domain NIY05_09590 IPR036291 NAD(P)-binding domain superfamily NIY05_09590 IPR011032 GroES-like superfamily NIY05_09590 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site NIY05_09590 IPR013154 Alcohol dehydrogenase, N-terminal NIY05_09590 IPR013149 Alcohol dehydrogenase, C-terminal NIY05_09595 IPR021134 Bestrophin/UPF0187 NIY05_09600 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_09600 IPR003593 AAA+ ATPase domain NIY05_09600 IPR011006 CheY-like superfamily NIY05_09600 IPR009057 Homeobox-like domain superfamily NIY05_09600 IPR002197 DNA binding HTH domain, Fis-type NIY05_09600 IPR010114 DNA-binding transcriptional regulator NtrC NIY05_09600 IPR025944 Sigma-54 interaction domain, conserved site NIY05_09600 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NIY05_09600 IPR002078 RNA polymerase sigma factor 54 interaction domain NIY05_09600 IPR001789 Signal transduction response regulator, receiver domain NIY05_09605 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NIY05_09605 IPR029021 Protein-tyrosine phosphatase-like NIY05_09605 IPR001279 Metallo-beta-lactamase NIY05_09605 IPR005939 Beta-lactamase hydrolase-like NIY05_09620 IPR002781 Transmembrane protein TauE-like NIY05_09635 IPR010499 Bacterial transcription activator, effector binding NIY05_09635 IPR018060 DNA binding HTH domain, AraC-type NIY05_09635 IPR020449 Transcription regulator HTH, AraC- type NIY05_09635 IPR029442 GyrI-like small molecule binding domain NIY05_09635 IPR009057 Homeobox-like domain superfamily NIY05_09635 IPR011256 Regulatory factor, effector binding domain superfamily NIY05_09635 IPR018062 HTH domain AraC-type, conserved site NIY05_09640 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_09640 IPR036390 Winged helix DNA-binding domain superfamily NIY05_09640 IPR002577 Helix-turn-helix, HxlR type NIY05_09645 IPR003680 Flavodoxin-like fold NIY05_09645 IPR029039 Flavoprotein-like superfamily NIY05_09645 IPR023048 NADH-azoreductase, FMN-dependent NIY05_09655 IPR036390 Winged helix DNA-binding domain superfamily NIY05_09655 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_09655 IPR011663 UbiC transcription regulator-associated NIY05_09655 IPR000524 Transcription regulator HTH, GntR NIY05_09655 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily NIY05_09670 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain NIY05_09670 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NIY05_09670 IPR010068 Taurine ABC transporter, substrate-binding protein TauA NIY05_09675 IPR035906 MetI-like superfamily NIY05_09675 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_09680 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_09680 IPR003593 AAA+ ATPase domain NIY05_09680 IPR017871 ABC transporter, conserved site NIY05_09680 IPR003439 ABC transporter-like NIY05_09680 IPR015859 ABC transporter, taurine import, TauD NIY05_09695 IPR005829 Sugar transporter, conserved site NIY05_09695 IPR020846 Major facilitator superfamily domain NIY05_09695 IPR004736 MFS transporter, metabolite:H symporter NIY05_09695 IPR005828 Major facilitator, sugar transporter-like NIY05_09695 IPR036259 MFS transporter superfamily NIY05_09700 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_09700 IPR010105 TonB-dependent siderophore receptor NIY05_09700 IPR010917 TonB-dependent receptor, conserved site NIY05_09700 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NIY05_09700 IPR039423 TonB-dependent receptor-like NIY05_09700 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_09700 IPR012910 TonB-dependent receptor, plug domain NIY05_09700 IPR030149 TonB-dependent siderophore receptor FcuA/FatA NIY05_09700 IPR010916 TonB box, conserved site NIY05_09705 IPR024083 Fumarase/histidase, N-terminal NIY05_09705 IPR008948 L-Aspartase-like NIY05_09705 IPR022761 Fumarate lyase, N-terminal NIY05_09705 IPR000362 Fumarate lyase family NIY05_09705 IPR020557 Fumarate lyase, conserved site NIY05_09705 IPR018951 Fumarase C, C-terminal NIY05_09705 IPR004708 Aspartate ammonia-lyase NIY05_09720 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_09720 IPR036390 Winged helix DNA-binding domain superfamily NIY05_09720 IPR005119 LysR, substrate-binding NIY05_09720 IPR000847 Transcription regulator HTH, LysR NIY05_09725 IPR005119 LysR, substrate-binding NIY05_09725 IPR000847 Transcription regulator HTH, LysR NIY05_09725 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_09725 IPR036390 Winged helix DNA-binding domain superfamily NIY05_09730 IPR016039 Thiolase-like NIY05_09730 IPR002155 Thiolase NIY05_09730 IPR020610 Thiolase, active site NIY05_09730 IPR020617 Thiolase, C-terminal NIY05_09730 IPR020613 Thiolase, conserved site NIY05_09730 IPR020616 Thiolase, N-terminal NIY05_09730 IPR020615 Thiolase, acyl-enzyme intermediate active site NIY05_09735 IPR006161 Conserved hypothetical protein CHP00336 NIY05_09735 IPR006160 Short chain fatty acid transporter AtoE NIY05_09740 IPR004165 Coenzyme A transferase family I NIY05_09740 IPR037171 NagB/RpiA transferase-like NIY05_09740 IPR004164 Coenzyme A transferase active site NIY05_09740 IPR012791 3-oxoacid CoA-transferase, subunit B NIY05_09745 IPR037171 NagB/RpiA transferase-like NIY05_09745 IPR004163 Coenzyme A transferase binding site NIY05_09745 IPR004165 Coenzyme A transferase family I NIY05_09745 IPR012792 3-oxoacid CoA-transferase, subunit A NIY05_09750 IPR036390 Winged helix DNA-binding domain superfamily NIY05_09750 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_09750 IPR000847 Transcription regulator HTH, LysR NIY05_09750 IPR005119 LysR, substrate-binding NIY05_09760 IPR003474 Gluconate transporter NIY05_09765 IPR011294 3-hydroxybutyrate dehydrogenase NIY05_09765 IPR036291 NAD(P)-binding domain superfamily NIY05_09765 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_09765 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_09775 IPR018060 DNA binding HTH domain, AraC-type NIY05_09775 IPR009594 Transcription regulator HTH, AraC, N-terminal NIY05_09775 IPR009057 Homeobox-like domain superfamily NIY05_09780 IPR036259 MFS transporter superfamily NIY05_09780 IPR020846 Major facilitator superfamily domain NIY05_09780 IPR005829 Sugar transporter, conserved site NIY05_09780 IPR011701 Major facilitator superfamily NIY05_09780 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family NIY05_09785 IPR002925 Dienelactone hydrolase NIY05_09785 IPR029058 Alpha/Beta hydrolase fold NIY05_09790 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_09790 IPR036291 NAD(P)-binding domain superfamily NIY05_09790 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_09800 IPR002563 Flavin reductase like domain NIY05_09800 IPR012349 FMN-binding split barrel NIY05_09800 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_09800 IPR036390 Winged helix DNA-binding domain superfamily NIY05_09810 IPR037923 Transcription regulator HTH-like NIY05_09810 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like NIY05_09810 IPR009057 Homeobox-like domain superfamily NIY05_09810 IPR018060 DNA binding HTH domain, AraC-type NIY05_09810 IPR018062 HTH domain AraC-type, conserved site NIY05_09815 IPR017927 FAD-binding domain, ferredoxin reductase-type NIY05_09815 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain NIY05_09815 IPR012675 Beta-grasp domain superfamily NIY05_09815 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site NIY05_09815 IPR017938 Riboflavin synthase-like beta-barrel NIY05_09815 IPR036010 2Fe-2S ferredoxin-like superfamily NIY05_09815 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NIY05_09815 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NIY05_09815 IPR001433 Oxidoreductase FAD/NAD(P)-binding NIY05_09820 IPR032710 NTF2-like domain superfamily NIY05_09820 IPR017640 Anthranilate 1,2-dioxygenase, small subunit NIY05_09820 IPR000391 Ring-hydroxylating dioxygenase beta subunit NIY05_09825 IPR017638 Anthranilate 1,2-dioxygenase, large subunit NIY05_09825 IPR017941 Rieske [2Fe-2S] iron-sulphur domain NIY05_09825 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NIY05_09825 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site NIY05_09825 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain NIY05_09825 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit NIY05_09830 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_09830 IPR036390 Winged helix DNA-binding domain superfamily NIY05_09830 IPR000847 Transcription regulator HTH, LysR NIY05_09830 IPR005116 Transport-associated OB, type 1 NIY05_09830 IPR004606 Molybdenum-pterin binding NIY05_09830 IPR003725 Molybdenum-binding protein ModE, N-terminal NIY05_09830 IPR016462 Molybdate-dependent transcriptional regulator ModE NIY05_09830 IPR008995 Molybdate/tungstate binding, C-terminal NIY05_09835 IPR005950 Molybdate ABC transporter, substrate-binding protein NIY05_09840 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_09840 IPR035906 MetI-like superfamily NIY05_09840 IPR011867 Molybdate ABC transporter, permease protein NIY05_09845 IPR004606 Molybdenum-pterin binding NIY05_09845 IPR011868 Molybdate ABC transporter, ATP-binding protein NIY05_09845 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_09845 IPR008995 Molybdate/tungstate binding, C-terminal NIY05_09845 IPR015852 ABC transporter, molybdenum import, ModC NIY05_09845 IPR003439 ABC transporter-like NIY05_09845 IPR003593 AAA+ ATPase domain NIY05_09845 IPR005116 Transport-associated OB, type 1 NIY05_09845 IPR017871 ABC transporter, conserved site NIY05_09850 IPR036291 NAD(P)-binding domain superfamily NIY05_09850 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_09850 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_09850 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase NIY05_09855 IPR036380 Isochorismatase-like superfamily NIY05_09855 IPR016291 Isochorismatase NIY05_09855 IPR000868 Isochorismatase-like NIY05_09855 IPR009081 Phosphopantetheine binding ACP domain NIY05_09855 IPR036736 ACP-like superfamily NIY05_09865 IPR006179 5'-Nucleotidase/apyrase NIY05_09865 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type NIY05_09865 IPR029052 Metallo-dependent phosphatase-like NIY05_09870 IPR003414 Polyphosphate kinase NIY05_09870 IPR041108 Polyphosphate kinase, C-terminal domain 1 NIY05_09870 IPR024953 Polyphosphate kinase middle domain NIY05_09870 IPR036830 Polyphosphate kinase middle domain superfamily NIY05_09870 IPR025200 Polyphosphate kinase C-terminal domain 2 NIY05_09870 IPR025198 Polyphosphate kinase N-terminal domain NIY05_09870 IPR036832 Polyphosphate kinase N-terminal domain superfamily NIY05_09875 IPR011725 Coenzyme PQQ biosynthesis protein A NIY05_09880 IPR001279 Metallo-beta-lactamase NIY05_09880 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NIY05_09880 IPR011842 Coenzyme PQQ biosynthesis protein B NIY05_09885 IPR039068 Pyrroloquinoline-quinone synthase-like NIY05_09885 IPR016084 Haem oxygenase-like, multi-helical NIY05_09885 IPR011845 Coenzyme PQQ biosynthesis protein C NIY05_09885 IPR004305 Thiaminase-2/PQQC NIY05_09890 IPR041881 Coenzyme PQQ synthesis protein D superfamily NIY05_09890 IPR008792 Coenzyme PQQ synthesis protein D NIY05_09890 IPR022479 Coenzyme PQQ synthesis D, bacteria NIY05_09895 IPR006638 Elp3/MiaB/NifB NIY05_09895 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site NIY05_09895 IPR017200 Coenzyme PQQ synthesis protein E NIY05_09895 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria NIY05_09895 IPR007197 Radical SAM NIY05_09895 IPR023885 4Fe4S-binding SPASM domain NIY05_09895 IPR013785 Aldolase-type TIM barrel NIY05_09900 IPR000180 Membrane dipeptidase, active site NIY05_09900 IPR032466 Metal-dependent hydrolase NIY05_09900 IPR008257 Peptidase M19 NIY05_09920 IPR030871 Cardiolipin synthase C NIY05_09920 IPR001736 Phospholipase D/Transphosphatidylase NIY05_09920 IPR025202 Phospholipase D-like domain NIY05_09935 IPR020835 Catalase superfamily NIY05_09935 IPR011614 Catalase core domain NIY05_09945 IPR011032 GroES-like superfamily NIY05_09945 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site NIY05_09945 IPR013154 Alcohol dehydrogenase, N-terminal NIY05_09945 IPR013149 Alcohol dehydrogenase, C-terminal NIY05_09945 IPR014183 Alcohol dehydrogenase class III NIY05_09945 IPR036291 NAD(P)-binding domain superfamily NIY05_09945 IPR020843 Polyketide synthase, enoylreductase domain NIY05_09955 IPR008966 Adhesion domain superfamily NIY05_09955 IPR036937 Fimbrial-type adhesion domain superfamily NIY05_09955 IPR000259 Fimbrial-type adhesion domain NIY05_09960 IPR025949 PapC-like, C-terminal domain NIY05_09960 IPR042186 Outer membrane usher protein FimD, plug domain NIY05_09960 IPR018030 Fimbrial membrane usher, conserved site NIY05_09960 IPR000015 Outer membrane usher protein NIY05_09960 IPR025885 PapC, N-terminal domain NIY05_09960 IPR037224 PapC, N-terminal domain superfamily NIY05_09965 IPR016147 Pili assembly chaperone, N-terminal NIY05_09965 IPR018046 Pili assembly chaperone, conserved site NIY05_09965 IPR016148 Pili assembly chaperone, C-terminal NIY05_09965 IPR001829 Pili assembly chaperone, bacterial NIY05_09965 IPR036316 Pili assembly chaperone, C-terminal domain superfamily NIY05_09965 IPR008962 PapD-like superfamily NIY05_09965 IPR013783 Immunoglobulin-like fold NIY05_09975 IPR036937 Fimbrial-type adhesion domain superfamily NIY05_09975 IPR008966 Adhesion domain superfamily NIY05_09975 IPR039458 FimA-like NIY05_09995 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_09995 IPR006076 FAD dependent oxidoreductase NIY05_10010 IPR002937 Amine oxidase NIY05_10010 IPR001613 Flavin amine oxidase NIY05_10010 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_10015 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_10015 IPR020946 Flavin monooxygenase-like NIY05_10020 IPR029058 Alpha/Beta hydrolase fold NIY05_10020 IPR022742 Serine aminopeptidase, S33 NIY05_10025 IPR010131 RND efflux system, outer membrane lipoprotein, NodT NIY05_10025 IPR003423 Outer membrane efflux protein NIY05_10030 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 NIY05_10030 IPR001036 Acriflavin resistance protein NIY05_10030 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NIY05_10035 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIY05_10035 IPR006143 RND efflux pump, membrane fusion protein NIY05_10040 IPR001789 Signal transduction response regulator, receiver domain NIY05_10040 IPR011006 CheY-like superfamily NIY05_10040 IPR001867 OmpR/PhoB-type DNA-binding domain NIY05_10040 IPR039420 Transcriptional regulatory protein WalR-like NIY05_10040 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_10065 IPR038404 TRAP transporter solute receptor DctP superfamily NIY05_10070 IPR020449 Transcription regulator HTH, AraC- type NIY05_10070 IPR037923 Transcription regulator HTH-like NIY05_10070 IPR009057 Homeobox-like domain superfamily NIY05_10070 IPR003313 AraC-type arabinose-binding/dimerisation domain NIY05_10070 IPR018062 HTH domain AraC-type, conserved site NIY05_10070 IPR018060 DNA binding HTH domain, AraC-type NIY05_10075 IPR022742 Serine aminopeptidase, S33 NIY05_10075 IPR029058 Alpha/Beta hydrolase fold NIY05_10080 IPR036291 NAD(P)-binding domain superfamily NIY05_10080 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_10085 IPR036291 NAD(P)-binding domain superfamily NIY05_10085 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_10085 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_10085 IPR023985 Mycofactocin-dependent oxidoreductase NIY05_10125 IPR004095 TGS NIY05_10125 IPR012675 Beta-grasp domain superfamily NIY05_10125 IPR004811 RelA/SpoT family NIY05_10125 IPR007685 RelA/SpoT NIY05_10125 IPR012676 TGS-like NIY05_10125 IPR033655 RelA, TGS domain NIY05_10125 IPR002912 ACT domain NIY05_10125 IPR003607 HD/PDEase domain NIY05_10135 IPR030048 Survival protein SurE NIY05_10135 IPR002828 Survival protein SurE-like phosphatase/nucleotidase NIY05_10135 IPR036523 SurE-like phosphatase/nucleotidase superfamily NIY05_10160 IPR020846 Major facilitator superfamily domain NIY05_10160 IPR036259 MFS transporter superfamily NIY05_10160 IPR011701 Major facilitator superfamily NIY05_10160 IPR004638 Drug resistance transporter EmrB-like NIY05_10165 IPR039562 Membrane fusion protein, biotin-lipoyl like domain NIY05_10170 IPR000120 Amidase NIY05_10170 IPR020556 Amidase, conserved site NIY05_10170 IPR023631 Amidase signature domain NIY05_10170 IPR036928 Amidase signature (AS) superfamily NIY05_10175 IPR000792 Transcription regulator LuxR, C-terminal NIY05_10175 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_10175 IPR016032 Signal transduction response regulator, C-terminal effector NIY05_10250 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal NIY05_10250 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase NIY05_10250 IPR016471 Nicotinamide phosphoribosyl transferase NIY05_10250 IPR013785 Aldolase-type TIM barrel NIY05_10255 IPR005946 Ribose-phosphate pyrophosphokinase NIY05_10255 IPR029057 Phosphoribosyltransferase-like NIY05_10255 IPR000836 Phosphoribosyltransferase domain NIY05_10255 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain NIY05_10255 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site NIY05_10255 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type NIY05_10275 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_10275 IPR017871 ABC transporter, conserved site NIY05_10275 IPR003593 AAA+ ATPase domain NIY05_10275 IPR003439 ABC transporter-like NIY05_10280 IPR000522 ABC transporter, permease protein, BtuC-like NIY05_10280 IPR037294 ABC transporter, BtuC-like NIY05_10290 IPR011032 GroES-like superfamily NIY05_10290 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site NIY05_10290 IPR013154 Alcohol dehydrogenase, N-terminal NIY05_10290 IPR013149 Alcohol dehydrogenase, C-terminal NIY05_10290 IPR020843 Polyketide synthase, enoylreductase domain NIY05_10290 IPR036291 NAD(P)-binding domain superfamily NIY05_10305 IPR009594 Transcription regulator HTH, AraC, N-terminal NIY05_10305 IPR009057 Homeobox-like domain superfamily NIY05_10305 IPR018060 DNA binding HTH domain, AraC-type NIY05_10310 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NIY05_10310 IPR013328 6-phosphogluconate dehydrogenase, domain 2 NIY05_10310 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding NIY05_10310 IPR036291 NAD(P)-binding domain superfamily NIY05_10310 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain NIY05_10310 IPR006398 2-hydroxy-3-oxopropionate reductase NIY05_10310 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site NIY05_10310 IPR015815 3-hydroxyisobutyrate dehydrogenase-related NIY05_10315 IPR011701 Major facilitator superfamily NIY05_10315 IPR020846 Major facilitator superfamily domain NIY05_10315 IPR036259 MFS transporter superfamily NIY05_10320 IPR001509 NAD-dependent epimerase/dehydratase NIY05_10320 IPR036291 NAD(P)-binding domain superfamily NIY05_10325 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_10325 IPR036390 Winged helix DNA-binding domain superfamily NIY05_10325 IPR005119 LysR, substrate-binding NIY05_10325 IPR000847 Transcription regulator HTH, LysR NIY05_10335 IPR037237 IlvD/EDD, N-terminal domain NIY05_10335 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase NIY05_10335 IPR042096 Dihydroxy-acid dehydratase, C-terminal NIY05_10335 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site NIY05_10340 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_10340 IPR015590 Aldehyde dehydrogenase domain NIY05_10340 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_10340 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_10355 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIY05_10355 IPR005694 Efflux pump membrane protein NIY05_10390 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NIY05_10390 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily NIY05_10395 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 NIY05_10395 IPR006236 D-3-phosphoglycerate dehydrogenase NIY05_10395 IPR036291 NAD(P)-binding domain superfamily NIY05_10395 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain NIY05_10395 IPR002912 ACT domain NIY05_10395 IPR029009 Allosteric substrate binding domain superfamily NIY05_10395 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NIY05_10395 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NIY05_10400 IPR020846 Major facilitator superfamily domain NIY05_10400 IPR036259 MFS transporter superfamily NIY05_10400 IPR011701 Major facilitator superfamily NIY05_10420 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_10420 IPR005119 LysR, substrate-binding NIY05_10420 IPR000847 Transcription regulator HTH, LysR NIY05_10420 IPR036390 Winged helix DNA-binding domain superfamily NIY05_10430 IPR011042 Six-bladed beta-propeller, TolB-like NIY05_10430 IPR005511 Senescence marker protein-30 (SMP-30) NIY05_10430 IPR013658 SMP-30/Gluconolactonase/LRE-like region NIY05_10435 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_10435 IPR011663 UbiC transcription regulator-associated NIY05_10435 IPR000524 Transcription regulator HTH, GntR NIY05_10435 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily NIY05_10435 IPR036390 Winged helix DNA-binding domain superfamily NIY05_10445 IPR032466 Metal-dependent hydrolase NIY05_10445 IPR006680 Amidohydrolase-related NIY05_10450 IPR036259 MFS transporter superfamily NIY05_10450 IPR011701 Major facilitator superfamily NIY05_10450 IPR020846 Major facilitator superfamily domain NIY05_10465 IPR008638 Filamentous haemagglutinin, N-terminal NIY05_10465 IPR025157 Hemagglutinin repeat NIY05_10465 IPR006914 VENN motif-containing domain NIY05_10465 IPR011050 Pectin lyase fold/virulence factor NIY05_10465 IPR012334 Pectin lyase fold NIY05_10465 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NIY05_10465 IPR024973 ESPR domain NIY05_10470 IPR005565 Haemolysin activator HlyB, C-terminal NIY05_10470 IPR013686 Polypeptide-transport-associated, ShlB-type NIY05_10470 IPR034746 POTRA domain NIY05_10470 IPR027282 Two partner secretion pathway transporter NIY05_10470 IPR035251 ShlB, POTRA domain NIY05_10480 IPR002933 Peptidase M20 NIY05_10480 IPR011650 Peptidase M20, dimerisation domain NIY05_10480 IPR036264 Bacterial exopeptidase dimerisation domain NIY05_10480 IPR017439 Amidohydrolase NIY05_10490 IPR003148 Regulator of K+ conductance, N-terminal NIY05_10490 IPR036291 NAD(P)-binding domain superfamily NIY05_10490 IPR038770 Sodium/solute symporter superfamily NIY05_10490 IPR004771 K+/H+ exchanger NIY05_10490 IPR006153 Cation/H+ exchanger NIY05_10495 IPR012938 Glucose/Sorbosone dehydrogenase NIY05_10495 IPR011042 Six-bladed beta-propeller, TolB-like NIY05_10495 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase NIY05_10495 IPR019893 PQQ-dependent dehydrogenase, s-GDH family NIY05_10500 IPR000847 Transcription regulator HTH, LysR NIY05_10500 IPR005119 LysR, substrate-binding NIY05_10500 IPR036390 Winged helix DNA-binding domain superfamily NIY05_10500 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_10505 IPR036380 Isochorismatase-like superfamily NIY05_10505 IPR000868 Isochorismatase-like NIY05_10515 IPR009057 Homeobox-like domain superfamily NIY05_10515 IPR001647 DNA-binding HTH domain, TetR-type NIY05_10515 IPR013570 Transcription regulator YsiA, C-terminal NIY05_10515 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NIY05_10520 IPR001279 Metallo-beta-lactamase NIY05_10520 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D NIY05_10520 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NIY05_10530 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_10530 IPR023753 FAD/NAD(P)-binding domain NIY05_10540 IPR000551 MerR-type HTH domain NIY05_10540 IPR015358 Transcription regulator MerR, DNA binding NIY05_10540 IPR011789 Cu(I)-responsive transcriptional regulator NIY05_10540 IPR009061 Putative DNA-binding domain superfamily NIY05_10545 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal NIY05_10545 IPR024072 Dihydrofolate reductase-like domain superfamily NIY05_10550 IPR036291 NAD(P)-binding domain superfamily NIY05_10550 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_10555 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_10555 IPR023753 FAD/NAD(P)-binding domain NIY05_10555 IPR013785 Aldolase-type TIM barrel NIY05_10555 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal NIY05_10560 IPR000835 MarR-type HTH domain NIY05_10560 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_10560 IPR036390 Winged helix DNA-binding domain superfamily NIY05_10565 IPR029058 Alpha/Beta hydrolase fold NIY05_10565 IPR013094 Alpha/beta hydrolase fold-3 NIY05_10580 IPR010582 Catalase immune-responsive domain NIY05_10580 IPR018028 Catalase, mono-functional, haem-containing NIY05_10580 IPR040333 Catalase, clade 3 NIY05_10580 IPR002226 Catalase haem-binding site NIY05_10580 IPR020835 Catalase superfamily NIY05_10580 IPR037060 Catalase core domain superfamily NIY05_10580 IPR011614 Catalase core domain NIY05_10580 IPR024708 Catalase active site NIY05_10580 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 NIY05_10585 IPR029058 Alpha/Beta hydrolase fold NIY05_10585 IPR000073 Alpha/beta hydrolase fold-1 NIY05_10585 IPR000639 Epoxide hydrolase-like NIY05_10595 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_10595 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_10595 IPR015590 Aldehyde dehydrogenase domain NIY05_10595 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent NIY05_10595 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_10595 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NIY05_10600 IPR011032 GroES-like superfamily NIY05_10600 IPR013149 Alcohol dehydrogenase, C-terminal NIY05_10600 IPR020843 Polyketide synthase, enoylreductase domain NIY05_10600 IPR036291 NAD(P)-binding domain superfamily NIY05_10600 IPR013154 Alcohol dehydrogenase, N-terminal NIY05_10605 IPR018212 Sodium/solute symporter, conserved site NIY05_10605 IPR038377 Sodium/glucose symporter superfamily NIY05_10605 IPR014083 Cation/acetate symporter ActP NIY05_10605 IPR001734 Sodium/solute symporter NIY05_10610 IPR007436 Protein of unknown function DUF485 NIY05_10615 IPR042099 AMP-dependent synthetase-like superfamily NIY05_10615 IPR000873 AMP-dependent synthetase/ligase NIY05_10615 IPR020845 AMP-binding, conserved site NIY05_10615 IPR025110 AMP-binding enzyme, C-terminal domain NIY05_10620 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_10620 IPR025944 Sigma-54 interaction domain, conserved site NIY05_10620 IPR002197 DNA binding HTH domain, Fis-type NIY05_10620 IPR009057 Homeobox-like domain superfamily NIY05_10620 IPR003593 AAA+ ATPase domain NIY05_10620 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NIY05_10620 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR NIY05_10620 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal NIY05_10620 IPR002078 RNA polymerase sigma factor 54 interaction domain NIY05_10625 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_10625 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase NIY05_10625 IPR036291 NAD(P)-binding domain superfamily NIY05_10625 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_10630 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_10630 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_10630 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_10630 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_10630 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_10630 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_10630 IPR006089 Acyl-CoA dehydrogenase, conserved site NIY05_10650 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_10650 IPR015590 Aldehyde dehydrogenase domain NIY05_10650 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_10650 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_10660 IPR011701 Major facilitator superfamily NIY05_10660 IPR020846 Major facilitator superfamily domain NIY05_10660 IPR036259 MFS transporter superfamily NIY05_10665 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase NIY05_10665 IPR042096 Dihydroxy-acid dehydratase, C-terminal NIY05_10665 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site NIY05_10665 IPR037237 IlvD/EDD, N-terminal domain NIY05_10670 IPR011711 GntR, C-terminal NIY05_10670 IPR036390 Winged helix DNA-binding domain superfamily NIY05_10670 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_10670 IPR000524 Transcription regulator HTH, GntR NIY05_10670 IPR008920 Transcription regulator FadR/GntR, C-terminal NIY05_10680 IPR005119 LysR, substrate-binding NIY05_10680 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_10680 IPR036390 Winged helix DNA-binding domain superfamily NIY05_10680 IPR000847 Transcription regulator HTH, LysR NIY05_10685 IPR036849 Enolase-like, C-terminal domain superfamily NIY05_10685 IPR029017 Enolase-like, N-terminal NIY05_10685 IPR029065 Enolase C-terminal domain-like NIY05_10685 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site NIY05_10685 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal NIY05_10685 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain NIY05_10685 IPR013370 Muconate/chloromuconate cycloisomerase NIY05_10690 IPR026029 Muconolactone isomerase domain NIY05_10690 IPR011008 Dimeric alpha-beta barrel NIY05_10690 IPR003464 Muconolactone delta-isomerase NIY05_10695 IPR012801 Catechol 1,2-dioxygenase, proteobacteria NIY05_10695 IPR015889 Intradiol ring-cleavage dioxygenase, core NIY05_10695 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal NIY05_10695 IPR007535 Catechol dioxygenase, N-terminal NIY05_10700 IPR037171 NagB/RpiA transferase-like NIY05_10700 IPR004163 Coenzyme A transferase binding site NIY05_10700 IPR004165 Coenzyme A transferase family I NIY05_10700 IPR012792 3-oxoacid CoA-transferase, subunit A NIY05_10705 IPR004164 Coenzyme A transferase active site NIY05_10705 IPR037171 NagB/RpiA transferase-like NIY05_10705 IPR004165 Coenzyme A transferase family I NIY05_10705 IPR012791 3-oxoacid CoA-transferase, subunit B NIY05_10710 IPR020615 Thiolase, acyl-enzyme intermediate active site NIY05_10710 IPR020613 Thiolase, conserved site NIY05_10710 IPR012793 Beta-ketoadipyl CoA thiolase NIY05_10710 IPR002155 Thiolase NIY05_10710 IPR020616 Thiolase, N-terminal NIY05_10710 IPR016039 Thiolase-like NIY05_10710 IPR020610 Thiolase, active site NIY05_10710 IPR020617 Thiolase, C-terminal NIY05_10715 IPR022742 Serine aminopeptidase, S33 NIY05_10715 IPR000073 Alpha/beta hydrolase fold-1 NIY05_10715 IPR029058 Alpha/Beta hydrolase fold NIY05_10715 IPR026968 3-oxoadipate enol-lactonase 1/2 NIY05_10720 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase NIY05_10720 IPR033813 Penicillin G acylase, C-terminal NIY05_10720 IPR023343 Penicillin amidase type, domain 1 NIY05_10720 IPR014395 Penicillin/GL-7-ACA/AHL acylase NIY05_10720 IPR029055 Nucleophile aminohydrolases, N-terminal NIY05_10725 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_10725 IPR015590 Aldehyde dehydrogenase domain NIY05_10725 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_10725 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_10725 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NIY05_10725 IPR016160 Aldehyde dehydrogenase, cysteine active site NIY05_10735 IPR015798 Copper amine oxidase, catalytic domain NIY05_10735 IPR000269 Copper amine oxidase NIY05_10735 IPR015802 Copper amine oxidase, N3-terminal NIY05_10735 IPR015800 Copper amine oxidase, N2-terminal NIY05_10735 IPR016182 Copper amine oxidase, N-terminal NIY05_10735 IPR036460 Copper amine oxidase, catalytic domain superfamily NIY05_10735 IPR012854 Copper amine oxidase-like, N-terminal NIY05_10735 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily NIY05_10740 IPR009057 Homeobox-like domain superfamily NIY05_10740 IPR018060 DNA binding HTH domain, AraC-type NIY05_10740 IPR037923 Transcription regulator HTH-like NIY05_10740 IPR023609 Transcription regulator HTH, RhaS NIY05_10740 IPR020449 Transcription regulator HTH, AraC- type NIY05_10740 IPR014710 RmlC-like jelly roll fold NIY05_10740 IPR003313 AraC-type arabinose-binding/dimerisation domain NIY05_10745 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_10745 IPR012349 FMN-binding split barrel NIY05_10745 IPR002563 Flavin reductase like domain NIY05_10745 IPR036390 Winged helix DNA-binding domain superfamily NIY05_10750 IPR001433 Oxidoreductase FAD/NAD(P)-binding NIY05_10750 IPR000951 Phthalate dioxygenase reductase NIY05_10750 IPR036010 2Fe-2S ferredoxin-like superfamily NIY05_10750 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NIY05_10750 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NIY05_10750 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site NIY05_10750 IPR012675 Beta-grasp domain superfamily NIY05_10750 IPR017927 FAD-binding domain, ferredoxin reductase-type NIY05_10750 IPR017938 Riboflavin synthase-like beta-barrel NIY05_10755 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_10755 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_10755 IPR036291 NAD(P)-binding domain superfamily NIY05_10755 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase NIY05_10765 IPR017941 Rieske [2Fe-2S] iron-sulphur domain NIY05_10765 IPR017639 Benzoate 1,2-dioxygenase, large subunit NIY05_10765 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit NIY05_10765 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site NIY05_10765 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain NIY05_10765 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NIY05_10780 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain NIY05_10780 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_10780 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_10780 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_10785 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit NIY05_10785 IPR000120 Amidase NIY05_10785 IPR023631 Amidase signature domain NIY05_10785 IPR036928 Amidase signature (AS) superfamily NIY05_10785 IPR020556 Amidase, conserved site NIY05_10795 IPR036259 MFS transporter superfamily NIY05_10795 IPR011701 Major facilitator superfamily NIY05_10795 IPR020846 Major facilitator superfamily domain NIY05_10805 IPR036291 NAD(P)-binding domain superfamily NIY05_10805 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_10805 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_10820 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_10820 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_10820 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_10820 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_10820 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_10820 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_10820 IPR006089 Acyl-CoA dehydrogenase, conserved site NIY05_10825 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_10825 IPR000847 Transcription regulator HTH, LysR NIY05_10825 IPR037416 Nodulation protein D, PBP2 NIY05_10825 IPR005119 LysR, substrate-binding NIY05_10825 IPR036390 Winged helix DNA-binding domain superfamily NIY05_10830 IPR036390 Winged helix DNA-binding domain superfamily NIY05_10830 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_10830 IPR005471 Transcription regulator IclR, N-terminal NIY05_10830 IPR014757 Transcription regulator IclR, C-terminal NIY05_10830 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR NIY05_10830 IPR029016 GAF-like domain superfamily NIY05_10835 IPR001279 Metallo-beta-lactamase NIY05_10835 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NIY05_10845 IPR007272 Sulphur transport domain NIY05_10855 IPR017511 PQQ-dependent membrane bound dehydrogenase NIY05_10855 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NIY05_10855 IPR002372 Pyrrolo-quinoline quinone repeat NIY05_10855 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIY05_10855 IPR001479 Quinoprotein dehydrogenase, conserved site NIY05_10860 IPR007049 Carbohydrate-selective porin OprB NIY05_10860 IPR038673 Carbohydrate-selective porin OprB superfamily NIY05_10865 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain NIY05_10865 IPR011050 Pectin lyase fold/virulence factor NIY05_10865 IPR006626 Parallel beta-helix repeat NIY05_10865 IPR012334 Pectin lyase fold NIY05_10870 IPR013785 Aldolase-type TIM barrel NIY05_10870 IPR001381 3-dehydroquinate dehydratase type I NIY05_10870 IPR018508 3-dehydroquinate dehydratase, active site NIY05_10875 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal NIY05_10875 IPR015889 Intradiol ring-cleavage dioxygenase, core NIY05_10875 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit NIY05_10880 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal NIY05_10880 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal NIY05_10880 IPR015889 Intradiol ring-cleavage dioxygenase, core NIY05_10880 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit NIY05_10885 IPR012788 4-carboxymuconolactone decarboxylase NIY05_10885 IPR029032 AhpD-like NIY05_10885 IPR003779 Carboxymuconolactone decarboxylase-like NIY05_10890 IPR011701 Major facilitator superfamily NIY05_10890 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family NIY05_10890 IPR020846 Major facilitator superfamily domain NIY05_10890 IPR036259 MFS transporter superfamily NIY05_10890 IPR005829 Sugar transporter, conserved site NIY05_10895 IPR026968 3-oxoadipate enol-lactonase 1/2 NIY05_10895 IPR000073 Alpha/beta hydrolase fold-1 NIY05_10895 IPR029058 Alpha/Beta hydrolase fold NIY05_10900 IPR020557 Fumarate lyase, conserved site NIY05_10900 IPR019468 Adenylosuccinate lyase C-terminal NIY05_10900 IPR022761 Fumarate lyase, N-terminal NIY05_10900 IPR008948 L-Aspartase-like NIY05_10900 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase NIY05_10900 IPR000362 Fumarate lyase family NIY05_10900 IPR024083 Fumarase/histidase, N-terminal NIY05_10905 IPR020616 Thiolase, N-terminal NIY05_10905 IPR020613 Thiolase, conserved site NIY05_10905 IPR020617 Thiolase, C-terminal NIY05_10905 IPR012793 Beta-ketoadipyl CoA thiolase NIY05_10905 IPR002155 Thiolase NIY05_10905 IPR020610 Thiolase, active site NIY05_10905 IPR016039 Thiolase-like NIY05_10905 IPR020615 Thiolase, acyl-enzyme intermediate active site NIY05_10910 IPR012791 3-oxoacid CoA-transferase, subunit B NIY05_10910 IPR004165 Coenzyme A transferase family I NIY05_10910 IPR004164 Coenzyme A transferase active site NIY05_10910 IPR037171 NagB/RpiA transferase-like NIY05_10915 IPR004165 Coenzyme A transferase family I NIY05_10915 IPR037171 NagB/RpiA transferase-like NIY05_10915 IPR004163 Coenzyme A transferase binding site NIY05_10915 IPR012792 3-oxoacid CoA-transferase, subunit A NIY05_10920 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NIY05_10920 IPR034683 Cytidylyltransferase IspD/TarI NIY05_10920 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site NIY05_10920 IPR029044 Nucleotide-diphospho-sugar transferases NIY05_10925 IPR023081 Cell division protein FtsB NIY05_10925 IPR007060 Septum formation initiator FtsL/DivIC NIY05_10930 IPR007353 Protein of unknown function DUF421 NIY05_10930 IPR023090 UPF0702, alpha/beta domain superfamily NIY05_10935 IPR000941 Enolase NIY05_10935 IPR036849 Enolase-like, C-terminal domain superfamily NIY05_10935 IPR029017 Enolase-like, N-terminal NIY05_10935 IPR020810 Enolase, C-terminal TIM barrel domain NIY05_10935 IPR020809 Enolase, conserved site NIY05_10935 IPR020811 Enolase, N-terminal NIY05_10940 IPR006269 3-deoxy-8-phosphooctulonate synthase NIY05_10940 IPR006218 DAHP synthetase I/KDSA NIY05_10940 IPR013785 Aldolase-type TIM barrel NIY05_10945 IPR029062 Class I glutamine amidotransferase-like NIY05_10945 IPR004468 CTP synthase NIY05_10945 IPR017456 CTP synthase, N-terminal NIY05_10945 IPR017926 Glutamine amidotransferase NIY05_10945 IPR033828 CTP synthase GATase domain NIY05_10945 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_10975 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal NIY05_10975 IPR013785 Aldolase-type TIM barrel NIY05_10975 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_10975 IPR023753 FAD/NAD(P)-binding domain NIY05_10990 IPR006218 DAHP synthetase I/KDSA NIY05_10990 IPR006219 DHAP synthase, class 1 NIY05_10990 IPR013785 Aldolase-type TIM barrel NIY05_10995 IPR003844 Uncharacterised protein family UPF0060 NIY05_11000 IPR003593 AAA+ ATPase domain NIY05_11000 IPR003959 ATPase, AAA-type, core NIY05_11000 IPR019489 Clp ATPase, C-terminal NIY05_11000 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_11000 IPR004176 Clp, N-terminal NIY05_11000 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA NIY05_11000 IPR001270 ClpA/B family NIY05_11000 IPR018368 ClpA/B, conserved site 1 NIY05_11000 IPR028299 ClpA/B, conserved site 2 NIY05_11000 IPR041546 ClpA/ClpB, AAA lid domain NIY05_11000 IPR036628 Clp, N-terminal domain superfamily NIY05_11005 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NIY05_11005 IPR022935 ATP-dependent Clp protease adaptor protein ClpS NIY05_11005 IPR003769 Adaptor protein ClpS, core NIY05_11015 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site NIY05_11015 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 NIY05_11015 IPR036291 NAD(P)-binding domain superfamily NIY05_11015 IPR000534 Semialdehyde dehydrogenase, NAD-binding NIY05_11015 IPR012280 Semialdehyde dehydrogenase, dimerisation domain NIY05_11030 IPR037171 NagB/RpiA transferase-like NIY05_11030 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup NIY05_11030 IPR004788 Ribose 5-phosphate isomerase, type A NIY05_11035 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIY05_11035 IPR005787 Threonine dehydratase, biosynthetic NIY05_11035 IPR001926 Pyridoxal-phosphate dependent enzyme NIY05_11035 IPR001721 Threonine dehydratase, ACT-like domain NIY05_11035 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site NIY05_11035 IPR038110 Threonine dehydratase, ACT-like domain superfamily NIY05_11040 IPR036291 NAD(P)-binding domain superfamily NIY05_11040 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily NIY05_11040 IPR003148 Regulator of K+ conductance, N-terminal NIY05_11040 IPR006037 Regulator of K+ conductance, C-terminal NIY05_11045 IPR004772 TrkH potassium transport family NIY05_11045 IPR003445 Cation transporter NIY05_11050 IPR003187 Phospholipase A1 NIY05_11050 IPR036541 Phospholipase A1 superfamily NIY05_11055 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like NIY05_11055 IPR013578 Peptidase M16C associated NIY05_11055 IPR007863 Peptidase M16, C-terminal NIY05_11055 IPR011765 Peptidase M16, N-terminal NIY05_11060 IPR010105 TonB-dependent siderophore receptor NIY05_11060 IPR010917 TonB-dependent receptor, conserved site NIY05_11060 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_11060 IPR039423 TonB-dependent receptor-like NIY05_11060 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_11060 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NIY05_11060 IPR012910 TonB-dependent receptor, plug domain NIY05_11065 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site NIY05_11065 IPR011611 Carbohydrate kinase PfkB NIY05_11065 IPR029056 Ribokinase-like NIY05_11075 IPR010840 Protein of unknown function DUF1449 NIY05_11085 IPR002585 Cytochrome ubiquinol oxidase subunit 1 NIY05_11090 IPR003317 Cytochrome ubiquinol oxidase subunit 2 NIY05_11095 IPR011724 Cyd operon protein YbgT NIY05_11095 IPR012994 Membrane bound YbgT-like NIY05_11110 IPR018635 Uncharacterised protein family UPF0319 NIY05_11120 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily NIY05_11120 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain NIY05_11120 IPR036225 SRP/SRP receptor, N-terminal NIY05_11120 IPR013822 Signal recognition particle SRP54, helical bundle NIY05_11120 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_11120 IPR004390 Signal-recognition particle receptor FtsY NIY05_11120 IPR003593 AAA+ ATPase domain NIY05_11145 IPR013785 Aldolase-type TIM barrel NIY05_11145 IPR000644 CBS domain NIY05_11145 IPR005990 Inosine-5'-monophosphate dehydrogenase NIY05_11145 IPR015875 IMP dehydrogenase / GMP reductase, conserved site NIY05_11145 IPR001093 IMP dehydrogenase/GMP reductase NIY05_11150 IPR004636 Acetylornithine/Succinylornithine transaminase family NIY05_11150 IPR005814 Aminotransferase class-III NIY05_11150 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_11150 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_11150 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_11155 IPR036249 Thioredoxin-like superfamily NIY05_11155 IPR033658 Glutaredoxin, PICOT-like NIY05_11155 IPR014434 Monothiol glutaredoxin NIY05_11155 IPR002109 Glutaredoxin NIY05_11155 IPR004480 Monothiol glutaredoxin-related NIY05_11165 IPR036390 Winged helix DNA-binding domain superfamily NIY05_11165 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_11165 IPR000847 Transcription regulator HTH, LysR NIY05_11165 IPR005119 LysR, substrate-binding NIY05_11170 IPR036005 Creatinase/aminopeptidase-like NIY05_11170 IPR001714 Peptidase M24, methionine aminopeptidase NIY05_11170 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 NIY05_11170 IPR000994 Peptidase M24 NIY05_11175 IPR004685 Branched-chain amino acid transport system II carrier protein NIY05_11200 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily NIY05_11200 IPR002114 Phosphotransferase system, HPr serine phosphorylation site NIY05_11200 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site NIY05_11200 IPR008731 Phosphotransferase system, enzyme I N-terminal NIY05_11200 IPR006318 Phosphotransferase system, enzyme I-like NIY05_11200 IPR002178 PTS EIIA type-2 domain NIY05_11200 IPR036618 PtsI, HPr-binding domain superfamily NIY05_11200 IPR016152 Phosphotransferase/anion transporter NIY05_11200 IPR035895 HPr-like superfamily NIY05_11200 IPR023151 PEP-utilising enzyme, conserved site NIY05_11200 IPR000121 PEP-utilising enzyme, C-terminal NIY05_11200 IPR018274 PEP-utilising enzyme, active site NIY05_11200 IPR008279 PEP-utilising enzyme, mobile domain NIY05_11200 IPR040442 Pyruvate kinase-like domain superfamily NIY05_11200 IPR000032 Phosphocarrier protein HPr-like NIY05_11200 IPR036637 Phosphohistidine domain superfamily NIY05_11205 IPR011611 Carbohydrate kinase PfkB NIY05_11205 IPR029056 Ribokinase-like NIY05_11205 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site NIY05_11205 IPR017583 Tagatose/fructose phosphokinase NIY05_11205 IPR022463 Fructose 1-phosphate kinase NIY05_11210 IPR036095 PTS system IIB component-like superfamily NIY05_11210 IPR013011 Phosphotransferase system, EIIB component, type 2 NIY05_11210 IPR003501 Phosphotransferase system, EIIB component, type 2/3 NIY05_11210 IPR003353 Phosphotransferase system, fructose-specific IIB subunit NIY05_11210 IPR006327 Phosphotransferase system, fructose IIC component NIY05_11210 IPR013014 Phosphotransferase system, EIIC component, type 2 NIY05_11210 IPR003352 Phosphotransferase system, EIIC NIY05_11230 IPR001633 EAL domain NIY05_11230 IPR035919 EAL domain superfamily NIY05_11230 IPR000160 GGDEF domain NIY05_11230 IPR005330 MHYT domain NIY05_11230 IPR029787 Nucleotide cyclase NIY05_11230 IPR035965 PAS domain superfamily NIY05_11240 IPR011042 Six-bladed beta-propeller, TolB-like NIY05_11240 IPR012938 Glucose/Sorbosone dehydrogenase NIY05_11240 IPR019893 PQQ-dependent dehydrogenase, s-GDH family NIY05_11240 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase NIY05_11245 IPR003738 SOS response associated peptidase (SRAP) NIY05_11245 IPR036590 SOS response associated peptidase-like NIY05_11250 IPR001902 SLC26A/SulP transporter NIY05_11250 IPR036513 STAS domain superfamily NIY05_11250 IPR002645 STAS domain NIY05_11250 IPR018045 Sulphate anion transporter, conserved site NIY05_11250 IPR011547 SLC26A/SulP transporter domain NIY05_11255 IPR034193 Proteinase K-like catalytic domain NIY05_11255 IPR000209 Peptidase S8/S53 domain NIY05_11255 IPR036852 Peptidase S8/S53 domain superfamily NIY05_11255 IPR023827 Peptidase S8, subtilisin, Asp-active site NIY05_11255 IPR022398 Peptidase S8, subtilisin, His-active site NIY05_11255 IPR023828 Peptidase S8, subtilisin, Ser-active site NIY05_11255 IPR015500 Peptidase S8, subtilisin-related NIY05_11255 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 NIY05_11255 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily NIY05_11270 IPR004841 Amino acid permease/ SLC12A domain NIY05_11270 IPR004840 Amino acid permease, conserved site NIY05_11275 IPR000192 Aminotransferase class V domain NIY05_11275 IPR010111 Kynureninase NIY05_11275 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_11275 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_11275 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_11280 IPR036390 Winged helix DNA-binding domain superfamily NIY05_11280 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_11280 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NIY05_11280 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIY05_11280 IPR000485 AsnC-type HTH domain NIY05_11280 IPR019888 Transcription regulator AsnC-type NIY05_11280 IPR011008 Dimeric alpha-beta barrel NIY05_11280 IPR011991 ArsR-like helix-turn-helix domain NIY05_11305 IPR036412 HAD-like superfamily NIY05_11305 IPR006439 HAD hydrolase, subfamily IA NIY05_11305 IPR041492 Haloacid dehalogenase-like hydrolase NIY05_11305 IPR023214 HAD superfamily NIY05_11310 IPR025708 Heat shock protein 15 NIY05_11310 IPR002942 RNA-binding S4 domain NIY05_11310 IPR036986 RNA-binding S4 domain superfamily NIY05_11315 IPR020584 DNA recombination/repair protein RecA, conserved site NIY05_11315 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface NIY05_11315 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_11315 IPR013765 DNA recombination and repair protein RecA NIY05_11315 IPR023400 DNA recombination and repair protein RecA, C-terminal NIY05_11315 IPR003593 AAA+ ATPase domain NIY05_11315 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain NIY05_11320 IPR003783 Regulatory protein RecX NIY05_11320 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_11335 IPR011004 Trimeric LpxA-like superfamily NIY05_11335 IPR018357 Hexapeptide transferase, conserved site NIY05_11335 IPR001451 Hexapeptide repeat NIY05_11335 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily NIY05_11335 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal NIY05_11335 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase NIY05_11340 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ NIY05_11340 IPR029069 HotDog domain superfamily NIY05_11340 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ NIY05_11345 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD NIY05_11345 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region NIY05_11345 IPR001451 Hexapeptide repeat NIY05_11345 IPR011004 Trimeric LpxA-like superfamily NIY05_11355 IPR039910 Surface antigen D15-like NIY05_11355 IPR000184 Bacterial surface antigen (D15) NIY05_11355 IPR023707 Outer membrane protein assembly factor BamA NIY05_11355 IPR010827 POTRA domain, BamA/TamA-like NIY05_11355 IPR034746 POTRA domain NIY05_11360 IPR008915 Peptidase M50 NIY05_11360 IPR036034 PDZ superfamily NIY05_11360 IPR041489 PDZ domain 6 NIY05_11360 IPR001478 PDZ domain NIY05_11360 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase NIY05_11365 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase NIY05_11365 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal NIY05_11365 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal NIY05_11365 IPR026877 DXP reductoisomerase C-terminal domain NIY05_11365 IPR036169 DXP reductoisomerase, C-terminal domain superfamily NIY05_11365 IPR036291 NAD(P)-binding domain superfamily NIY05_11370 IPR000374 Phosphatidate cytidylyltransferase NIY05_11375 IPR001441 Decaprenyl diphosphate synthase-like NIY05_11375 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site NIY05_11375 IPR036424 Decaprenyl diphosphate synthase-like superfamily NIY05_11380 IPR002661 Ribosome recycling factor NIY05_11380 IPR023584 Ribosome recycling factor domain NIY05_11380 IPR036191 RRF superfamily NIY05_11385 IPR036393 Acetylglutamate kinase-like superfamily NIY05_11385 IPR001048 Aspartate/glutamate/uridylate kinase NIY05_11385 IPR011817 Uridylate kinase NIY05_11385 IPR015963 Uridylate kinase, bacteria NIY05_11390 IPR020612 Methylthiotransferase, conserved site NIY05_11390 IPR007197 Radical SAM NIY05_11390 IPR041582 RimO, TRAM domain NIY05_11390 IPR005840 Ribosomal protein S12 methylthiotransferase RimO NIY05_11390 IPR038135 Methylthiotransferase, N-terminal domain superfamily NIY05_11390 IPR006638 Elp3/MiaB/NifB NIY05_11390 IPR005839 Methylthiotransferase NIY05_11390 IPR023404 Radical SAM, alpha/beta horseshoe NIY05_11390 IPR013848 Methylthiotransferase, N-terminal NIY05_11390 IPR002792 TRAM domain NIY05_11395 IPR013767 PAS fold NIY05_11395 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NIY05_11395 IPR035965 PAS domain superfamily NIY05_11395 IPR000014 PAS domain NIY05_11395 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NIY05_11395 IPR005467 Histidine kinase domain NIY05_11395 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_11395 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_11395 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NIY05_11400 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NIY05_11400 IPR010114 DNA-binding transcriptional regulator NtrC NIY05_11400 IPR025944 Sigma-54 interaction domain, conserved site NIY05_11400 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NIY05_11400 IPR001789 Signal transduction response regulator, receiver domain NIY05_11400 IPR002078 RNA polymerase sigma factor 54 interaction domain NIY05_11400 IPR002197 DNA binding HTH domain, Fis-type NIY05_11400 IPR009057 Homeobox-like domain superfamily NIY05_11400 IPR011006 CheY-like superfamily NIY05_11400 IPR003593 AAA+ ATPase domain NIY05_11400 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_11420 IPR002292 Ornithine/putrescine carbamoyltransferase NIY05_11420 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding NIY05_11420 IPR006130 Aspartate/ornithine carbamoyltransferase NIY05_11420 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily NIY05_11420 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain NIY05_11420 IPR024904 Ornithine carbamoyltransferase NIY05_11430 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase NIY05_11430 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site NIY05_11430 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily NIY05_11440 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_11440 IPR006076 FAD dependent oxidoreductase NIY05_11440 IPR023080 D-amino acid dehydrogenase DadA NIY05_11460 IPR024083 Fumarase/histidase, N-terminal NIY05_11460 IPR008948 L-Aspartase-like NIY05_11460 IPR022761 Fumarate lyase, N-terminal NIY05_11460 IPR000362 Fumarate lyase family NIY05_11460 IPR018951 Fumarase C, C-terminal NIY05_11460 IPR005677 Fumarate hydratase, class II NIY05_11460 IPR020557 Fumarate lyase, conserved site NIY05_11465 IPR036291 NAD(P)-binding domain superfamily NIY05_11465 IPR005886 UDP-glucose 4-epimerase NIY05_11465 IPR016040 NAD(P)-binding domain NIY05_11470 IPR027396 DsrEFH-like NIY05_11470 IPR003787 Sulphur relay, DsrE/F-like protein NIY05_11470 IPR017463 Sulphur relay, TusD/DsrE NIY05_11490 IPR000620 EamA domain NIY05_11495 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_11495 IPR036390 Winged helix DNA-binding domain superfamily NIY05_11495 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_11495 IPR000524 Transcription regulator HTH, GntR NIY05_11495 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_11495 IPR004839 Aminotransferase, class I/classII NIY05_11495 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_11500 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_11500 IPR011991 ArsR-like helix-turn-helix domain NIY05_11500 IPR002577 Helix-turn-helix, HxlR type NIY05_11500 IPR036390 Winged helix DNA-binding domain superfamily NIY05_11505 IPR036425 MoaB/Mog-like domain superfamily NIY05_11505 IPR001453 MoaB/Mog domain NIY05_11505 IPR008284 Molybdenum cofactor biosynthesis, conserved site NIY05_11505 IPR005111 MoeA, C-terminal, domain IV NIY05_11505 IPR036688 MoeA, C-terminal, domain IV superfamily NIY05_11505 IPR005110 MoeA, N-terminal and linker domain NIY05_11505 IPR036135 MoeA, N-terminal and linker domain superfamily NIY05_11505 IPR038987 Molybdopterin biosynthesis protein MoeA-like NIY05_11510 IPR001453 MoaB/Mog domain NIY05_11510 IPR023045 Molybdenum cofactor biosynthesis C NIY05_11510 IPR036425 MoaB/Mog-like domain superfamily NIY05_11510 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain NIY05_11510 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily NIY05_11510 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA NIY05_11515 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily NIY05_11515 IPR003448 Molybdopterin biosynthesis MoaE NIY05_11525 IPR010505 Molybdenum cofactor synthesis C-terminal NIY05_11525 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site NIY05_11525 IPR013483 Molybdenum cofactor biosynthesis protein A NIY05_11525 IPR006638 Elp3/MiaB/NifB NIY05_11525 IPR013785 Aldolase-type TIM barrel NIY05_11525 IPR007197 Radical SAM NIY05_11530 IPR009010 Aspartate decarboxylase-like domain superfamily NIY05_11530 IPR006657 Molybdopterin dinucleotide-binding domain NIY05_11530 IPR006656 Molybdopterin oxidoreductase NIY05_11530 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain NIY05_11530 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site NIY05_11530 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain NIY05_11535 IPR025877 MobA-like NTP transferase NIY05_11535 IPR029044 Nucleotide-diphospho-sugar transferases NIY05_11535 IPR013482 Molybdenum cofactor guanylyltransferase NIY05_11540 IPR009010 Aspartate decarboxylase-like domain superfamily NIY05_11540 IPR007419 BFD-like [2Fe-2S]-binding domain NIY05_11540 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily NIY05_11540 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain NIY05_11540 IPR006657 Molybdopterin dinucleotide-binding domain NIY05_11540 IPR006656 Molybdopterin oxidoreductase NIY05_11540 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain NIY05_11540 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site NIY05_11545 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal NIY05_11545 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site NIY05_11545 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain NIY05_11545 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB NIY05_11545 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily NIY05_11545 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain NIY05_11545 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily NIY05_11545 IPR023753 FAD/NAD(P)-binding domain NIY05_11545 IPR017121 Nitrite reductase [NAD(P)H], large subunit NIY05_11545 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily NIY05_11545 IPR007419 BFD-like [2Fe-2S]-binding domain NIY05_11545 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_11550 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal NIY05_11550 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NIY05_11550 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type NIY05_11550 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site NIY05_11550 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain NIY05_11550 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB NIY05_11550 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily NIY05_11550 IPR023753 FAD/NAD(P)-binding domain NIY05_11550 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain NIY05_11550 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily NIY05_11550 IPR007419 BFD-like [2Fe-2S]-binding domain NIY05_11550 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_11560 IPR039420 Transcriptional regulatory protein WalR-like NIY05_11560 IPR011006 CheY-like superfamily NIY05_11560 IPR001867 OmpR/PhoB-type DNA-binding domain NIY05_11560 IPR016032 Signal transduction response regulator, C-terminal effector NIY05_11560 IPR001789 Signal transduction response regulator, receiver domain NIY05_11560 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_11565 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_11565 IPR005890 Nitrate transport ATP-binding subunit C/D NIY05_11565 IPR017871 ABC transporter, conserved site NIY05_11565 IPR003439 ABC transporter-like NIY05_11565 IPR003593 AAA+ ATPase domain NIY05_11575 IPR025188 Domain of unknown function DUF4113 NIY05_11575 IPR001126 UmuC domain NIY05_11575 IPR017961 DNA polymerase, Y-family, little finger domain NIY05_11575 IPR036775 DNA polymerase, Y-family, little finger domain superfamily NIY05_11580 IPR001874 Dehydroquinase, class II NIY05_11580 IPR018509 Dehydroquinase, class II, conserved site NIY05_11580 IPR036441 Dehydroquinase, class II superfamily NIY05_11585 IPR001249 Acetyl-CoA biotin carboxyl carrier NIY05_11585 IPR001882 Biotin-binding site NIY05_11585 IPR000089 Biotin/lipoyl attachment NIY05_11585 IPR011053 Single hybrid motif NIY05_11590 IPR011054 Rudiment single hybrid motif NIY05_11590 IPR016185 Pre-ATP-grasp domain superfamily NIY05_11590 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain NIY05_11590 IPR005482 Biotin carboxylase, C-terminal NIY05_11590 IPR005481 Biotin carboxylase-like, N-terminal domain NIY05_11590 IPR013815 ATP-grasp fold, subdomain 1 NIY05_11590 IPR011764 Biotin carboxylation domain NIY05_11590 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase NIY05_11590 IPR011761 ATP-grasp fold NIY05_11600 IPR026032 Probable 3-phenylpropionic acid transporter NIY05_11600 IPR024989 Major facilitator superfamily associated domain NIY05_11600 IPR036259 MFS transporter superfamily NIY05_11670 IPR011055 Duplicated hybrid motif NIY05_11670 IPR010090 Phage tail tape measure protein NIY05_11670 IPR000189 Prokaryotic transglycosylase, active site NIY05_11670 IPR008258 Transglycosylase SLT domain 1 NIY05_11670 IPR016047 Peptidase M23 NIY05_11670 IPR023346 Lysozyme-like domain superfamily NIY05_11690 IPR005569 Arc-like DNA binding domain NIY05_11690 IPR013321 Arc-type ribbon-helix-helix NIY05_11690 IPR010985 Ribbon-helix-helix NIY05_11875 IPR002941 DNA methylase N-4/N-6 NIY05_11875 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site NIY05_11875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_11875 IPR001091 Restriction/modification DNA-methylase NIY05_11985 IPR002932 Glutamate synthase domain NIY05_11985 IPR024188 Glutamate synthase large subunit-like protein NIY05_11985 IPR013785 Aldolase-type TIM barrel NIY05_11985 IPR027283 Glutamate synthase large subunit-like protein, bacteria NIY05_12000 IPR006094 FAD linked oxidase, N-terminal NIY05_12000 IPR036318 FAD-binding, type PCMH-like superfamily NIY05_12000 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal NIY05_12000 IPR016166 FAD-binding domain, PCMH-type NIY05_12000 IPR016167 FAD-binding, type PCMH, subdomain 1 NIY05_12000 IPR016169 FAD-binding, type PCMH, subdomain 2 NIY05_12000 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase NIY05_12000 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily NIY05_12005 IPR023485 Phosphotyrosine protein phosphatase I NIY05_12005 IPR017867 Protein-tyrosine phosphatase, low molecular weight NIY05_12005 IPR036196 Phosphotyrosine protein phosphatase I superfamily NIY05_12015 IPR039697 Iron-type alcohol dehydrogenase-like NIY05_12015 IPR018211 Alcohol dehydrogenase, iron-type, conserved site NIY05_12015 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA NIY05_12020 IPR006683 Thioesterase domain NIY05_12020 IPR029069 HotDog domain superfamily NIY05_12025 IPR017850 Alkaline-phosphatase-like, core domain superfamily NIY05_12025 IPR017767 Bacterial phospholipase C, phosphocholine-specific NIY05_12025 IPR007312 Phosphoesterase NIY05_12025 IPR008475 Bacterial phospholipase C, C-terminal domain NIY05_12025 IPR006311 Twin-arginine translocation pathway, signal sequence NIY05_12030 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV NIY05_12030 IPR003593 AAA+ ATPase domain NIY05_12030 IPR001270 ClpA/B family NIY05_12030 IPR022754 DNA polymerase III, gamma subunit, domain III NIY05_12030 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal NIY05_12030 IPR021029 DNA polymerase III, tau subunit, domain V NIY05_12030 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily NIY05_12030 IPR012763 DNA polymerase III, subunit gamma/ tau NIY05_12030 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_12035 IPR011701 Major facilitator superfamily NIY05_12035 IPR020846 Major facilitator superfamily domain NIY05_12035 IPR036259 MFS transporter superfamily NIY05_12045 IPR001466 Beta-lactamase-related NIY05_12045 IPR012338 Beta-lactamase/transpeptidase-like NIY05_12050 IPR003965 Fatty acid synthase NIY05_12050 IPR029069 HotDog domain superfamily NIY05_12050 IPR002539 MaoC-like dehydratase domain NIY05_12055 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_12055 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_12055 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase NIY05_12055 IPR036291 NAD(P)-binding domain superfamily NIY05_12060 IPR012806 Acetyl-CoA C-acyltransferase FadI NIY05_12060 IPR002155 Thiolase NIY05_12060 IPR016039 Thiolase-like NIY05_12060 IPR020610 Thiolase, active site NIY05_12060 IPR020617 Thiolase, C-terminal NIY05_12060 IPR020613 Thiolase, conserved site NIY05_12060 IPR020616 Thiolase, N-terminal NIY05_12070 IPR005119 LysR, substrate-binding NIY05_12070 IPR000847 Transcription regulator HTH, LysR NIY05_12070 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_12070 IPR036390 Winged helix DNA-binding domain superfamily NIY05_12075 IPR004730 Transaldolase type 1 NIY05_12075 IPR018225 Transaldolase, active site NIY05_12075 IPR001585 Transaldolase/Fructose-6-phosphate aldolase NIY05_12075 IPR013785 Aldolase-type TIM barrel NIY05_12080 IPR004778 Homoserine/Threonine efflux protein NIY05_12080 IPR001123 Amino acid exporter protein, LeuE-type NIY05_12085 IPR036390 Winged helix DNA-binding domain superfamily NIY05_12085 IPR011991 ArsR-like helix-turn-helix domain NIY05_12085 IPR000485 AsnC-type HTH domain NIY05_12085 IPR011008 Dimeric alpha-beta barrel NIY05_12085 IPR019888 Transcription regulator AsnC-type NIY05_12085 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIY05_12085 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NIY05_12085 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_12090 IPR004711 Benzoate transporter NIY05_12095 IPR003416 MgtC/SapB/SrpB/YhiD family NIY05_12100 IPR001757 P-type ATPase NIY05_12100 IPR023214 HAD superfamily NIY05_12100 IPR036412 HAD-like superfamily NIY05_12100 IPR008250 P-type ATPase, A domain superfamily NIY05_12100 IPR023298 P-type ATPase, transmembrane domain superfamily NIY05_12100 IPR018303 P-type ATPase, phosphorylation site NIY05_12100 IPR023299 P-type ATPase, cytoplasmic domain N NIY05_12100 IPR004014 Cation-transporting P-type ATPase, N-terminal NIY05_12100 IPR006068 Cation-transporting P-type ATPase, C-terminal NIY05_12100 IPR006415 P-type ATPase, subfamily IIIB NIY05_12125 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_12125 IPR006015 Universal stress protein A family NIY05_12125 IPR006016 UspA NIY05_12130 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_12130 IPR032781 ABC-transporter extension domain NIY05_12130 IPR003593 AAA+ ATPase domain NIY05_12130 IPR003439 ABC transporter-like NIY05_12130 IPR017871 ABC transporter, conserved site NIY05_12150 IPR010917 TonB-dependent receptor, conserved site NIY05_12150 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_12150 IPR012910 TonB-dependent receptor, plug domain NIY05_12150 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NIY05_12150 IPR010105 TonB-dependent siderophore receptor NIY05_12150 IPR039423 TonB-dependent receptor-like NIY05_12150 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_12150 IPR010916 TonB box, conserved site NIY05_12185 IPR011066 Mechanosensitive ion channel MscS, C-terminal NIY05_12185 IPR030192 Miniconductance mechanosensitive channel YbdG NIY05_12185 IPR010920 LSM domain superfamily NIY05_12185 IPR006685 Mechanosensitive ion channel MscS NIY05_12190 IPR039426 Vitamin B12 transporter BtuB-like NIY05_12190 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_12190 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_12190 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NIY05_12190 IPR010105 TonB-dependent siderophore receptor NIY05_12190 IPR012910 TonB-dependent receptor, plug domain NIY05_12195 IPR009057 Homeobox-like domain superfamily NIY05_12195 IPR001647 DNA-binding HTH domain, TetR-type NIY05_12210 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_12210 IPR011991 ArsR-like helix-turn-helix domain NIY05_12210 IPR000485 AsnC-type HTH domain NIY05_12210 IPR011008 Dimeric alpha-beta barrel NIY05_12210 IPR019888 Transcription regulator AsnC-type NIY05_12210 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIY05_12210 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NIY05_12210 IPR036390 Winged helix DNA-binding domain superfamily NIY05_12215 IPR002701 Chorismate mutase II, prokaryotic-type NIY05_12215 IPR036263 Chorismate mutase type II superfamily NIY05_12215 IPR008240 Chorismate mutase, periplasmic NIY05_12225 IPR036291 NAD(P)-binding domain superfamily NIY05_12225 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_12235 IPR027268 Peptidase M4/M1, CTD superfamily NIY05_12235 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold NIY05_12235 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal NIY05_12235 IPR012779 Peptidase M1, alanyl aminopeptidase NIY05_12235 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily NIY05_12235 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase NIY05_12235 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily NIY05_12235 IPR042097 Aminopeptidase N-like , N-terminal NIY05_12235 IPR014782 Peptidase M1, membrane alanine aminopeptidase NIY05_12250 IPR029056 Ribokinase-like NIY05_12250 IPR000417 Hydroxyethylthiazole kinase NIY05_12255 IPR011256 Regulatory factor, effector binding domain superfamily NIY05_12255 IPR029442 GyrI-like small molecule binding domain NIY05_12255 IPR010499 Bacterial transcription activator, effector binding NIY05_12265 IPR029491 Helicase Helix-turn-helix domain NIY05_12265 IPR010285 DNA helicase Pif1-like NIY05_12265 IPR003593 AAA+ ATPase domain NIY05_12265 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_12270 IPR039697 Iron-type alcohol dehydrogenase-like NIY05_12270 IPR018211 Alcohol dehydrogenase, iron-type, conserved site NIY05_12270 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA NIY05_12280 IPR029016 GAF-like domain superfamily NIY05_12285 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_12285 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_12285 IPR016160 Aldehyde dehydrogenase, cysteine active site NIY05_12285 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NIY05_12285 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_12285 IPR015590 Aldehyde dehydrogenase domain NIY05_12290 IPR002293 Amino acid/polyamine transporter I NIY05_12295 IPR013785 Aldolase-type TIM barrel NIY05_12295 IPR010628 Ethanolamine ammonia lyase large subunit NIY05_12300 IPR009246 Ethanolamine ammonia-lyase light chain NIY05_12300 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal NIY05_12300 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal NIY05_12305 IPR017926 Glutamine amidotransferase NIY05_12305 IPR029062 Class I glutamine amidotransferase-like NIY05_12305 IPR001674 GMP synthase, C-terminal NIY05_12305 IPR004739 GMP synthase, glutamine amidotransferase NIY05_12305 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_12305 IPR022310 NAD/GMP synthase NIY05_12305 IPR025777 GMP synthetase ATP pyrophosphatase domain NIY05_12305 IPR022955 GMP synthase NIY05_12310 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain NIY05_12310 IPR000924 Glutamyl/glutaminyl-tRNA synthetase NIY05_12310 IPR022861 Glutamine-tRNA ligase, bacterial NIY05_12310 IPR004514 Glutamine-tRNA synthetase NIY05_12310 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NIY05_12310 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal NIY05_12310 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily NIY05_12310 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_12310 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain NIY05_12310 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily NIY05_12315 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase NIY05_12315 IPR029000 Cyclophilin-like domain superfamily NIY05_12315 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site NIY05_12315 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain NIY05_12320 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type NIY05_12320 IPR010138 UDP-2,3-diacylglucosamine hydrolase NIY05_12330 IPR033878 Nitroreductase NfsB-like NIY05_12330 IPR029479 Nitroreductase NIY05_12330 IPR000415 Nitroreductase-like NIY05_12340 IPR005001 RNA-binding protein Hfq NIY05_12340 IPR010920 LSM domain superfamily NIY05_12345 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_12345 IPR039657 Dimethylallyltransferase NIY05_12345 IPR018022 IPP transferase NIY05_12350 IPR037198 MutL, C-terminal domain superfamily NIY05_12350 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIY05_12350 IPR020568 Ribosomal protein S5 domain 2-type fold NIY05_12350 IPR042121 MutL, C-terminal domain, regulatory subdomain NIY05_12350 IPR002099 DNA mismatch repair protein family, N-terminal NIY05_12350 IPR014790 MutL, C-terminal, dimerisation NIY05_12350 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms NIY05_12350 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_12350 IPR014762 DNA mismatch repair, conserved site NIY05_12350 IPR013507 DNA mismatch repair protein, S5 domain 2-like NIY05_12350 IPR042120 MutL, C-terminal domain, dimerisation subdomain NIY05_12350 IPR020667 DNA mismatch repair protein, MutL NIY05_12355 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE NIY05_12355 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_12360 IPR006145 Pseudouridine synthase, RsuA/RluA NIY05_12360 IPR002942 RNA-binding S4 domain NIY05_12360 IPR036986 RNA-binding S4 domain superfamily NIY05_12360 IPR006225 Pseudouridine synthase, RluC/RluD NIY05_12360 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site NIY05_12360 IPR020103 Pseudouridine synthase, catalytic domain superfamily NIY05_12375 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain NIY05_12375 IPR020103 Pseudouridine synthase, catalytic domain superfamily NIY05_12375 IPR006145 Pseudouridine synthase, RsuA/RluA NIY05_12375 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F NIY05_12375 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site NIY05_12375 IPR002942 RNA-binding S4 domain NIY05_12375 IPR036986 RNA-binding S4 domain superfamily NIY05_12385 IPR007382 Uncharacterised protein family UPF0756, transmembrame NIY05_12390 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_12390 IPR036390 Winged helix DNA-binding domain superfamily NIY05_12390 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain NIY05_12390 IPR000847 Transcription regulator HTH, LysR NIY05_12390 IPR005119 LysR, substrate-binding NIY05_12405 IPR020846 Major facilitator superfamily domain NIY05_12405 IPR036259 MFS transporter superfamily NIY05_12405 IPR011701 Major facilitator superfamily NIY05_12410 IPR028325 Voltage-gated potassium channel NIY05_12410 IPR014710 RmlC-like jelly roll fold NIY05_12410 IPR005821 Ion transport domain NIY05_12410 IPR018488 Cyclic nucleotide-binding, conserved site NIY05_12410 IPR000595 Cyclic nucleotide-binding domain NIY05_12410 IPR018490 Cyclic nucleotide-binding-like NIY05_12420 IPR015932 Aconitase, domain 2 NIY05_12420 IPR036288 Aconitase B, HEAT-like domain superfamily NIY05_12420 IPR015933 Aconitase B, HEAT-like domain NIY05_12420 IPR015929 Aconitase B, swivel NIY05_12420 IPR036008 Aconitase, iron-sulfur domain NIY05_12420 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NIY05_12420 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain NIY05_12420 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 NIY05_12420 IPR004406 Aconitase B NIY05_12420 IPR018136 Aconitase family, 4Fe-4S cluster binding site NIY05_12435 IPR000184 Bacterial surface antigen (D15) NIY05_12435 IPR010827 POTRA domain, BamA/TamA-like NIY05_12435 IPR039910 Surface antigen D15-like NIY05_12435 IPR034746 POTRA domain NIY05_12435 IPR035243 TamA, POTRA domain 1 NIY05_12440 IPR023727 Lysophospholipid transporter LplT NIY05_12440 IPR036259 MFS transporter superfamily NIY05_12440 IPR011701 Major facilitator superfamily NIY05_12445 IPR009078 Ferritin-like superfamily NIY05_12445 IPR011566 Ubiquinone biosynthesis protein Coq7 NIY05_12455 IPR036651 Glutamine synthetase, N-terminal domain superfamily NIY05_12455 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain NIY05_12455 IPR027303 Glutamine synthetase, glycine-rich site NIY05_12455 IPR008146 Glutamine synthetase, catalytic domain NIY05_12460 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_12460 IPR039420 Transcriptional regulatory protein WalR-like NIY05_12460 IPR001789 Signal transduction response regulator, receiver domain NIY05_12460 IPR001867 OmpR/PhoB-type DNA-binding domain NIY05_12460 IPR011006 CheY-like superfamily NIY05_12465 IPR025201 Sensor protein KdpD, transmembrane domain NIY05_12465 IPR038318 KdpD, transmembrane domain superfamily NIY05_12465 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NIY05_12465 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NIY05_12465 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_12465 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_12465 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NIY05_12465 IPR029016 GAF-like domain superfamily NIY05_12465 IPR005467 Histidine kinase domain NIY05_12465 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_12465 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal NIY05_12470 IPR003820 Potassium-transporting ATPase C chain NIY05_12475 IPR018303 P-type ATPase, phosphorylation site NIY05_12475 IPR023299 P-type ATPase, cytoplasmic domain N NIY05_12475 IPR023298 P-type ATPase, transmembrane domain superfamily NIY05_12475 IPR008250 P-type ATPase, A domain superfamily NIY05_12475 IPR036412 HAD-like superfamily NIY05_12475 IPR006391 P-type ATPase, B chain, subfamily IA NIY05_12475 IPR001757 P-type ATPase NIY05_12480 IPR004623 Potassium-transporting ATPase A chain NIY05_12480 IPR023298 P-type ATPase, transmembrane domain superfamily NIY05_12495 IPR004147 UbiB domain NIY05_12495 IPR011009 Protein kinase-like domain superfamily NIY05_12495 IPR000719 Protein kinase domain NIY05_12500 IPR035985 Ubiquitin-activating enzyme NIY05_12500 IPR000594 THIF-type NAD/FAD binding fold NIY05_12500 IPR012730 Molybdopterin synthase sulfurylase MoeB NIY05_12505 IPR012349 FMN-binding split barrel NIY05_12505 IPR002563 Flavin reductase like domain NIY05_12510 IPR042099 AMP-dependent synthetase-like superfamily NIY05_12510 IPR025110 AMP-binding enzyme, C-terminal domain NIY05_12510 IPR020845 AMP-binding, conserved site NIY05_12510 IPR000873 AMP-dependent synthetase/ligase NIY05_12515 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_12515 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_12515 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_12515 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_12515 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_12515 IPR006089 Acyl-CoA dehydrogenase, conserved site NIY05_12515 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_12520 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_12520 IPR036291 NAD(P)-binding domain superfamily NIY05_12520 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_12525 IPR009057 Homeobox-like domain superfamily NIY05_12525 IPR018060 DNA binding HTH domain, AraC-type NIY05_12525 IPR018062 HTH domain AraC-type, conserved site NIY05_12525 IPR020449 Transcription regulator HTH, AraC- type NIY05_12530 IPR010067 Aliphatic sulfonates-binding protein NIY05_12530 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NIY05_12530 IPR015168 SsuA/THI5-like NIY05_12535 IPR035906 MetI-like superfamily NIY05_12535 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_12540 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific NIY05_12540 IPR040758 Release factor glutamine methyltransferase, N-terminal domain NIY05_12540 IPR025714 Methyltransferase domain NIY05_12540 IPR004556 Methyltransferase HemK-like NIY05_12540 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NIY05_12540 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_12545 IPR005139 Peptide chain release factor NIY05_12545 IPR000352 Peptide chain release factor class I NIY05_12545 IPR004373 Peptide chain release factor 1 NIY05_12555 IPR005119 LysR, substrate-binding NIY05_12555 IPR000847 Transcription regulator HTH, LysR NIY05_12555 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_12555 IPR036390 Winged helix DNA-binding domain superfamily NIY05_12570 IPR019949 Luciferase family oxidoreductase, group 1 NIY05_12570 IPR036661 Luciferase-like domain superfamily NIY05_12570 IPR011251 Luciferase-like domain NIY05_12580 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD NIY05_12585 IPR001173 Glycosyltransferase 2-like NIY05_12585 IPR029044 Nucleotide-diphospho-sugar transferases NIY05_12585 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA NIY05_12590 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel NIY05_12590 IPR002509 NodB homology domain NIY05_12590 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB NIY05_12590 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal NIY05_12600 IPR005177 Bifunctional kinase-pyrophosphorylase NIY05_12600 IPR026530 Phosphoenolpyruvate synthase regulatory protein NIY05_12605 IPR036637 Phosphohistidine domain superfamily NIY05_12605 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily NIY05_12605 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding NIY05_12605 IPR040442 Pyruvate kinase-like domain superfamily NIY05_12605 IPR023151 PEP-utilising enzyme, conserved site NIY05_12605 IPR013815 ATP-grasp fold, subdomain 1 NIY05_12605 IPR018274 PEP-utilising enzyme, active site NIY05_12605 IPR006319 Phosphoenolpyruvate synthase NIY05_12605 IPR008279 PEP-utilising enzyme, mobile domain NIY05_12605 IPR000121 PEP-utilising enzyme, C-terminal NIY05_12615 IPR006333 Cytochrome o ubiquinol oxidase subunit II NIY05_12615 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain NIY05_12615 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain NIY05_12615 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily NIY05_12615 IPR010514 COX aromatic rich motif NIY05_12615 IPR002429 Cytochrome c oxidase subunit II-like C-terminal NIY05_12615 IPR008972 Cupredoxin NIY05_12620 IPR023616 Cytochrome c oxidase-like, subunit I domain NIY05_12620 IPR036927 Cytochrome c oxidase-like, subunit I superfamily NIY05_12620 IPR000883 Cytochrome c oxidase subunit I NIY05_12620 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site NIY05_12620 IPR014207 Cytochrome o ubiquinol oxidase, subunit I NIY05_12625 IPR033946 Ubiquinol oxidase subunit III domain NIY05_12625 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle NIY05_12625 IPR014206 Cytochrome o ubiquinol oxidase, subunit III NIY05_12625 IPR000298 Cytochrome c oxidase subunit III-like NIY05_12625 IPR024791 Cytochrome c oxidase subunit III NIY05_12625 IPR035973 Cytochrome c oxidase subunit III-like superfamily NIY05_12630 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes NIY05_12630 IPR014210 Cytochrome o ubiquinol oxidase subunit IV NIY05_12635 IPR006369 Protohaem IX farnesyltransferase NIY05_12635 IPR000537 UbiA prenyltransferase family NIY05_12635 IPR030470 UbiA prenyltransferase conserved site NIY05_12640 IPR000529 Ribosomal protein S6 NIY05_12640 IPR020815 Ribosomal protein S6, conserved site NIY05_12640 IPR020814 Ribosomal protein S6, plastid/chloroplast NIY05_12640 IPR035980 Ribosomal protein S6 superfamily NIY05_12640 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 NIY05_12645 IPR018275 Ribosomal protein S18, conserved site NIY05_12645 IPR036870 Ribosomal protein S18 superfamily NIY05_12645 IPR001648 Ribosomal protein S18 NIY05_12650 IPR036935 Ribosomal protein L9, N-terminal domain superfamily NIY05_12650 IPR020070 Ribosomal protein L9, N-terminal NIY05_12650 IPR036791 Ribosomal protein L9, C-terminal domain superfamily NIY05_12650 IPR020069 Ribosomal protein L9, C-terminal NIY05_12650 IPR000244 Ribosomal protein L9 NIY05_12650 IPR009027 Ribosomal protein L9/RNase H1, N-terminal NIY05_12650 IPR020594 Ribosomal protein L9, bacteria/chloroplast NIY05_12655 IPR007692 DNA helicase, DnaB type NIY05_12655 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_12655 IPR007693 DNA helicase, DnaB-like, N-terminal NIY05_12655 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal NIY05_12655 IPR003593 AAA+ ATPase domain NIY05_12655 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily NIY05_12655 IPR007694 DNA helicase, DnaB-like, C-terminal NIY05_12660 IPR000821 Alanine racemase NIY05_12660 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal NIY05_12660 IPR011079 Alanine racemase, C-terminal NIY05_12660 IPR001608 Alanine racemase, N-terminal NIY05_12660 IPR029066 PLP-binding barrel NIY05_12670 IPR013589 Bacterial transglutaminase-like, N-terminal NIY05_12670 IPR038765 Papain-like cysteine peptidase superfamily NIY05_12670 IPR002931 Transglutaminase-like NIY05_12680 IPR016450 Uncharacterised conserved protein UCP005522 NIY05_12680 IPR025841 Circularly permuted ATP-grasp type 2 NIY05_12690 IPR020595 MnmG-related, conserved site NIY05_12690 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG NIY05_12690 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related NIY05_12690 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_12690 IPR026904 GidA associated domain 3 NIY05_12700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_12700 IPR004498 Ribosomal protein L11 methyltransferase NIY05_12710 IPR005412 DNA-binding protein Fis NIY05_12710 IPR009057 Homeobox-like domain superfamily NIY05_12710 IPR002197 DNA binding HTH domain, Fis-type NIY05_12715 IPR024051 AICAR transformylase, duplicated domain superfamily NIY05_12715 IPR002695 Bifunctional purine biosynthesis protein PurH-like NIY05_12715 IPR036914 Methylglyoxal synthase-like domain superfamily NIY05_12715 IPR016193 Cytidine deaminase-like NIY05_12715 IPR011607 Methylglyoxal synthase-like domain NIY05_12720 IPR000115 Phosphoribosylglycinamide synthetase NIY05_12720 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NIY05_12720 IPR016185 Pre-ATP-grasp domain superfamily NIY05_12720 IPR013815 ATP-grasp fold, subdomain 1 NIY05_12720 IPR011761 ATP-grasp fold NIY05_12720 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily NIY05_12720 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal NIY05_12720 IPR020560 Phosphoribosylglycinamide synthetase, C-domain NIY05_12720 IPR011054 Rudiment single hybrid motif NIY05_12720 IPR020559 Phosphoribosylglycinamide synthetase, conserved site NIY05_12725 IPR004872 Lipoprotein NlpA family NIY05_12730 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain NIY05_12730 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal NIY05_12730 IPR017871 ABC transporter, conserved site NIY05_12730 IPR003593 AAA+ ATPase domain NIY05_12730 IPR003439 ABC transporter-like NIY05_12730 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_12730 IPR026253 Methionine import ATP-binding protein MetN NIY05_12730 IPR018449 NIL domain NIY05_12735 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_12735 IPR035906 MetI-like superfamily NIY05_12740 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain NIY05_12740 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain NIY05_12740 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NIY05_12740 IPR017782 Hydroxyacylglutathione hydrolase NIY05_12740 IPR001279 Metallo-beta-lactamase NIY05_12750 IPR036458 Sodium:dicarboxylate symporter superfamily NIY05_12750 IPR001991 Sodium:dicarboxylate symporter NIY05_12750 IPR023954 C4-dicarboxylate transport protein NIY05_12750 IPR018107 Sodium:dicarboxylate symporter, conserved site NIY05_12765 IPR012337 Ribonuclease H-like superfamily NIY05_12765 IPR032874 DDE domain NIY05_12765 IPR036397 Ribonuclease H superfamily NIY05_12765 IPR001584 Integrase, catalytic core NIY05_12775 IPR032874 DDE domain NIY05_12775 IPR001584 Integrase, catalytic core NIY05_12775 IPR012337 Ribonuclease H-like superfamily NIY05_12775 IPR036397 Ribonuclease H superfamily NIY05_12785 IPR006118 Recombinase, conserved site NIY05_12785 IPR006119 Resolvase, N-terminal catalytic domain NIY05_12785 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily NIY05_12785 IPR006120 Resolvase, HTH domain NIY05_12785 IPR009057 Homeobox-like domain superfamily NIY05_12790 IPR021767 Transposon Tn21 modulator protein NIY05_12790 IPR035919 EAL domain superfamily NIY05_12790 IPR001633 EAL domain NIY05_12800 IPR004107 Integrase, SAM-like, N-terminal NIY05_12800 IPR011010 DNA breaking-rejoining enzyme, catalytic core NIY05_12800 IPR013762 Integrase-like, catalytic domain superfamily NIY05_12800 IPR002104 Integrase, catalytic domain NIY05_12800 IPR011946 Integrase, integron-type NIY05_12800 IPR010998 Integrase/recombinase, N-terminal NIY05_12805 IPR016181 Acyl-CoA N-acyltransferase NIY05_12805 IPR000182 GNAT domain NIY05_12825 IPR000390 Small multidrug resistance protein family NIY05_12830 IPR011005 Dihydropteroate synthase-like NIY05_12830 IPR006390 Dihydropteroate synthase NIY05_12830 IPR000489 Pterin-binding domain NIY05_12835 IPR016181 Acyl-CoA N-acyltransferase NIY05_12850 IPR001584 Integrase, catalytic core NIY05_12850 IPR012337 Ribonuclease H-like superfamily NIY05_12850 IPR032874 DDE domain NIY05_12850 IPR036397 Ribonuclease H superfamily NIY05_12855 IPR011009 Protein kinase-like domain superfamily NIY05_12855 IPR002575 Aminoglycoside phosphotransferase NIY05_12855 IPR024165 Aminoglycoside 3-phosphotransferase NIY05_12870 IPR001584 Integrase, catalytic core NIY05_12870 IPR012337 Ribonuclease H-like superfamily NIY05_12870 IPR036397 Ribonuclease H superfamily NIY05_12870 IPR032874 DDE domain NIY05_12875 IPR006118 Recombinase, conserved site NIY05_12875 IPR006120 Resolvase, HTH domain NIY05_12875 IPR009057 Homeobox-like domain superfamily NIY05_12875 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily NIY05_12875 IPR006119 Resolvase, N-terminal catalytic domain NIY05_12885 IPR032874 DDE domain NIY05_12885 IPR001584 Integrase, catalytic core NIY05_12885 IPR012337 Ribonuclease H-like superfamily NIY05_12885 IPR036397 Ribonuclease H superfamily NIY05_12890 IPR000871 Beta-lactamase, class-A NIY05_12890 IPR023650 Beta-lactamase, class-A active site NIY05_12890 IPR012338 Beta-lactamase/transpeptidase-like NIY05_12895 IPR009057 Homeobox-like domain superfamily NIY05_12895 IPR006118 Recombinase, conserved site NIY05_12895 IPR006119 Resolvase, N-terminal catalytic domain NIY05_12895 IPR006120 Resolvase, HTH domain NIY05_12895 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily NIY05_12900 IPR001584 Integrase, catalytic core NIY05_12900 IPR036397 Ribonuclease H superfamily NIY05_12900 IPR012337 Ribonuclease H-like superfamily NIY05_12900 IPR032874 DDE domain NIY05_12910 IPR016181 Acyl-CoA N-acyltransferase NIY05_12910 IPR007041 Arginine N-succinyltransferase AstA/AruG NIY05_12910 IPR017650 Arginine N-succinyltransferase NIY05_12915 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_12915 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_12915 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria NIY05_12915 IPR004636 Acetylornithine/Succinylornithine transaminase family NIY05_12915 IPR005814 Aminotransferase class-III NIY05_12915 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_12915 IPR026330 Succinylornithine transaminase NIY05_12925 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NIY05_12925 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_12925 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_12925 IPR015590 Aldehyde dehydrogenase domain NIY05_12925 IPR015657 Aminobutyraldehyde dehydrogenase NIY05_12925 IPR017749 1-pyrroline dehydrogenase NIY05_12925 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_12935 IPR036390 Winged helix DNA-binding domain superfamily NIY05_12935 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_12935 IPR000524 Transcription regulator HTH, GntR NIY05_12935 IPR008920 Transcription regulator FadR/GntR, C-terminal NIY05_12935 IPR011711 GntR, C-terminal NIY05_12945 IPR004841 Amino acid permease/ SLC12A domain NIY05_12950 IPR006076 FAD dependent oxidoreductase NIY05_12950 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_12950 IPR012727 Glycine oxidase ThiO NIY05_12955 IPR004841 Amino acid permease/ SLC12A domain NIY05_12955 IPR004840 Amino acid permease, conserved site NIY05_12995 IPR001826 RHS protein NIY05_12995 IPR022385 Rhs repeat-associated core NIY05_12995 IPR006530 YD repeat NIY05_12995 IPR031325 RHS repeat NIY05_13000 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein NIY05_13000 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset NIY05_13000 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain NIY05_13000 IPR006531 Gp5 N-terminal NIY05_13000 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal NIY05_13000 IPR037026 Vgr protein, OB-fold domain superfamily NIY05_13020 IPR004872 Lipoprotein NlpA family NIY05_13025 IPR010295 Protein of unknown function DUF898 NIY05_13040 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal NIY05_13040 IPR023753 FAD/NAD(P)-binding domain NIY05_13040 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_13040 IPR013785 Aldolase-type TIM barrel NIY05_13045 IPR001518 Argininosuccinate synthase NIY05_13045 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail NIY05_13045 IPR018223 Argininosuccinate synthase, conserved site NIY05_13045 IPR023434 Argininosuccinate synthase, type 1 subfamily NIY05_13045 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body NIY05_13045 IPR023437 Argininosuccinate synthase, type 2 subfamily NIY05_13045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_13050 IPR029787 Nucleotide cyclase NIY05_13050 IPR016132 Phytochrome chromophore attachment domain NIY05_13050 IPR001294 Phytochrome NIY05_13050 IPR013515 Phytochrome, central region NIY05_13050 IPR001633 EAL domain NIY05_13050 IPR035919 EAL domain superfamily NIY05_13050 IPR003018 GAF domain NIY05_13050 IPR000160 GGDEF domain NIY05_13050 IPR029016 GAF-like domain superfamily NIY05_13055 IPR006680 Amidohydrolase-related NIY05_13055 IPR032466 Metal-dependent hydrolase NIY05_13055 IPR002195 Dihydroorotase, conserved site NIY05_13055 IPR004721 Dihydroorotase homodimeric type NIY05_13060 IPR005987 Ribonuclease T NIY05_13060 IPR036397 Ribonuclease H superfamily NIY05_13060 IPR013520 Exonuclease, RNase T/DNA polymerase III NIY05_13060 IPR012337 Ribonuclease H-like superfamily NIY05_13070 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_13070 IPR012910 TonB-dependent receptor, plug domain NIY05_13070 IPR010105 TonB-dependent siderophore receptor NIY05_13070 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NIY05_13070 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_13070 IPR039423 TonB-dependent receptor-like NIY05_13075 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal NIY05_13075 IPR023753 FAD/NAD(P)-binding domain NIY05_13075 IPR013785 Aldolase-type TIM barrel NIY05_13075 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_13080 IPR017871 ABC transporter, conserved site NIY05_13080 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal NIY05_13080 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_13080 IPR003593 AAA+ ATPase domain NIY05_13080 IPR003439 ABC transporter-like NIY05_13085 IPR025966 Oligopeptide transport permease C-like, N-terminal domain NIY05_13085 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_13085 IPR035906 MetI-like superfamily NIY05_13090 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_13090 IPR035906 MetI-like superfamily NIY05_13095 IPR030678 Peptide/nickel binding protein, MppA-type NIY05_13095 IPR039424 Solute-binding protein family 5 NIY05_13095 IPR000914 Solute-binding protein family 5 domain NIY05_13100 IPR036779 LysM domain superfamily NIY05_13100 IPR000189 Prokaryotic transglycosylase, active site NIY05_13100 IPR023346 Lysozyme-like domain superfamily NIY05_13100 IPR018392 LysM domain NIY05_13100 IPR008258 Transglycosylase SLT domain 1 NIY05_13100 IPR036779 LysM domain superfamily NIY05_13100 IPR023346 Lysozyme-like domain superfamily NIY05_13100 IPR008258 Transglycosylase SLT domain 1 NIY05_13100 IPR018392 LysM domain NIY05_13100 IPR000189 Prokaryotic transglycosylase, active site NIY05_13105 IPR012337 Ribonuclease H-like superfamily NIY05_13105 IPR013520 Exonuclease, RNase T/DNA polymerase III NIY05_13105 IPR036397 Ribonuclease H superfamily NIY05_13105 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain NIY05_13105 IPR006309 DNA polymerase 3, epsilon subunit NIY05_13115 IPR000086 NUDIX hydrolase domain NIY05_13115 IPR022925 NADH pyrophosphatase NudC NIY05_13115 IPR015797 NUDIX hydrolase-like domain superfamily NIY05_13115 IPR020084 NUDIX hydrolase, conserved site NIY05_13115 IPR015376 Zinc ribbon, NADH pyrophosphatase NIY05_13125 IPR014004 Transport-associated and nodulation domain, bacteria NIY05_13125 IPR007055 BON domain NIY05_13130 IPR011335 Restriction endonuclease type II-like NIY05_13130 IPR011856 tRNA endonuclease-like domain superfamily NIY05_13130 IPR003509 Uncharacterised protein family UPF0102 NIY05_13135 IPR000878 Tetrapyrrole methylase NIY05_13135 IPR035996 Tetrapyrrole methylase superfamily NIY05_13135 IPR014777 Tetrapyrrole methylase, subdomain 1 NIY05_13135 IPR014776 Tetrapyrrole methylase, subdomain 2 NIY05_13135 IPR008189 rRNA small subunit methyltransferase I NIY05_13135 IPR018063 SAM-dependent methyltransferase RsmI, conserved site NIY05_13145 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_13145 IPR017685 HTH-type transcriptional regulator ArgP NIY05_13145 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria NIY05_13145 IPR005119 LysR, substrate-binding NIY05_13145 IPR000847 Transcription regulator HTH, LysR NIY05_13145 IPR036390 Winged helix DNA-binding domain superfamily NIY05_13150 IPR001123 Amino acid exporter protein, LeuE-type NIY05_13150 IPR004777 L-lysine exporter/arginine exporter NIY05_13150 IPR023445 Arginine exporter protein ArgO, enterobacteria NIY05_13160 IPR009061 Putative DNA-binding domain superfamily NIY05_13160 IPR011794 Hg(II)-responsive transcriptional regulator NIY05_13160 IPR000551 MerR-type HTH domain NIY05_13170 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 NIY05_13170 IPR002938 FAD-binding domain NIY05_13170 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_13170 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site NIY05_13175 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase NIY05_13175 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site NIY05_13175 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 NIY05_13175 IPR002938 FAD-binding domain NIY05_13175 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_13180 IPR007865 Aminopeptidase P, N-terminal NIY05_13180 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal NIY05_13180 IPR036005 Creatinase/aminopeptidase-like NIY05_13180 IPR000994 Peptidase M24 NIY05_13180 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site NIY05_13265 IPR011055 Duplicated hybrid motif NIY05_13265 IPR023346 Lysozyme-like domain superfamily NIY05_13265 IPR016047 Peptidase M23 NIY05_13265 IPR010090 Phage tail tape measure protein NIY05_13265 IPR000189 Prokaryotic transglycosylase, active site NIY05_13265 IPR008258 Transglycosylase SLT domain 1 NIY05_13325 IPR006944 Bacteriophage/Gene transfer agent portal protein NIY05_13425 IPR003593 AAA+ ATPase domain NIY05_13425 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal NIY05_13425 IPR007692 DNA helicase, DnaB type NIY05_13425 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_13425 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily NIY05_13425 IPR007693 DNA helicase, DnaB-like, N-terminal NIY05_13425 IPR007694 DNA helicase, DnaB-like, C-terminal NIY05_13445 IPR036390 Winged helix DNA-binding domain superfamily NIY05_13445 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_13445 IPR015927 Peptidase S24/S26A/S26B/S26C NIY05_13445 IPR006197 Peptidase S24, LexA-like NIY05_13445 IPR006200 Transcription regulator LexA NIY05_13445 IPR039418 LexA-like NIY05_13445 IPR006199 LexA repressor, DNA-binding domain NIY05_13445 IPR036286 LexA/Signal peptidase-like superfamily NIY05_13500 IPR012549 Phosphoethanolamine transferase, N-terminal NIY05_13500 IPR017850 Alkaline-phosphatase-like, core domain superfamily NIY05_13500 IPR000917 Sulfatase, N-terminal NIY05_13500 IPR040423 Phosphoethanolamine transferase NIY05_13545 IPR011055 Duplicated hybrid motif NIY05_13545 IPR016047 Peptidase M23 NIY05_13545 IPR013731 Opacity-associated protein A, N-terminal NIY05_13545 IPR018392 LysM domain NIY05_13870 IPR037171 NagB/RpiA transferase-like NIY05_13870 IPR002698 5-formyltetrahydrofolate cyclo-ligase NIY05_13870 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily NIY05_13875 IPR006664 Outer membrane protein, bacterial NIY05_13875 IPR037873 BamE-like NIY05_13875 IPR007450 Lipoprotein SmpA/OmlA NIY05_13875 IPR006665 OmpA-like domain NIY05_13875 IPR036737 OmpA-like domain superfamily NIY05_13880 IPR008640 Head domain of trimeric autotransporter adhesin NIY05_13880 IPR024973 ESPR domain NIY05_13880 IPR011049 Serralysin-like metalloprotease, C-terminal NIY05_13880 IPR005594 YadA-like, C-terminal NIY05_13880 IPR008635 Coiled stalk of trimeric autotransporter adhesin NIY05_13885 IPR027065 Lon protease NIY05_13885 IPR003959 ATPase, AAA-type, core NIY05_13885 IPR003593 AAA+ ATPase domain NIY05_13885 IPR008269 Peptidase S16, Lon proteolytic domain NIY05_13885 IPR003111 Lon, substrate-binding domain NIY05_13885 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_13885 IPR008268 Peptidase S16, active site NIY05_13885 IPR015947 PUA-like superfamily NIY05_13885 IPR020568 Ribosomal protein S5 domain 2-type fold NIY05_13885 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIY05_13885 IPR004815 Lon protease, bacterial/eukaryotic-type NIY05_13885 IPR027543 Lon protease, bacterial NIY05_13890 IPR003742 RNA methyltransferase RlmH NIY05_13890 IPR029028 Alpha/beta knot methyltransferases NIY05_13890 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NIY05_13895 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type NIY05_13895 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B NIY05_13905 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase NIY05_13905 IPR033524 Leu/Phe/Val dehydrogenases active site NIY05_13905 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal NIY05_13905 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain NIY05_13905 IPR014362 Glutamate dehydrogenase NIY05_13905 IPR036291 NAD(P)-binding domain superfamily NIY05_13905 IPR033922 NAD(P) binding domain of glutamate dehydrogenase NIY05_13910 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB NIY05_13910 IPR011005 Dihydropteroate synthase-like NIY05_13910 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIY05_13910 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria NIY05_13910 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIY05_13910 IPR007202 4Fe-4S domain NIY05_13915 IPR000445 Helix-hairpin-helix motif NIY05_13915 IPR005759 Endonuclease III NIY05_13915 IPR011257 DNA glycosylase NIY05_13915 IPR004036 Endonuclease III-like, conserved site-2 NIY05_13915 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif NIY05_13915 IPR004035 Endonuclease III, iron-sulphur binding site NIY05_13915 IPR003265 HhH-GPD domain NIY05_13915 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal NIY05_13925 IPR033690 Adenylate kinase, conserved site NIY05_13925 IPR000850 Adenylate kinase/UMP-CMP kinase NIY05_13925 IPR006259 Adenylate kinase subfamily NIY05_13925 IPR007862 Adenylate kinase, active site lid domain NIY05_13925 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_13940 IPR017790 Penicillin-binding protein 2 NIY05_13940 IPR001460 Penicillin-binding protein, transpeptidase NIY05_13940 IPR036138 Penicillin-binding protein, dimerisation domain superfamily NIY05_13940 IPR005311 Penicillin-binding protein, dimerisation domain NIY05_13940 IPR012338 Beta-lactamase/transpeptidase-like NIY05_13945 IPR004398 RNA methyltransferase, RsmD NIY05_13945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_13945 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NIY05_13955 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_13955 IPR004400 Urease accessory protein UreG NIY05_13955 IPR003495 CobW/HypB/UreG, nucleotide-binding domain NIY05_13960 IPR002639 Urease accessory protein UreF NIY05_13960 IPR038277 UreF domain superfamily NIY05_13965 IPR007864 Urease accessory protein UreE, C-terminal domain NIY05_13965 IPR004029 UreE urease accessory, N-terminal NIY05_13965 IPR036118 UreE urease accessory, N-terminal domain superfamily NIY05_13965 IPR012406 Urease accessory protein UreE NIY05_13965 IPR036675 UreE, C-terminal domain superfamily NIY05_13970 IPR029754 Urease nickel binding site NIY05_13970 IPR017951 Urease alpha subunit, C-terminal NIY05_13970 IPR005848 Urease, alpha subunit NIY05_13970 IPR032466 Metal-dependent hydrolase NIY05_13970 IPR011059 Metal-dependent hydrolase, composite domain superfamily NIY05_13970 IPR006680 Amidohydrolase-related NIY05_13970 IPR011612 Urease alpha-subunit, N-terminal domain NIY05_13970 IPR017950 Urease active site NIY05_13975 IPR002019 Urease, beta subunit NIY05_13975 IPR036461 Urease, beta subunit superfamily NIY05_13980 IPR012010 Urease, gamma subunit NIY05_13980 IPR002026 Urease, gamma/gamma-beta subunit NIY05_13980 IPR036463 Urease, gamma subunit superfamily NIY05_13985 IPR002669 Urease accessory protein UreD NIY05_14000 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily NIY05_14000 IPR006254 Isocitrate lyase NIY05_14000 IPR039556 ICL/PEPM domain NIY05_14000 IPR040442 Pyruvate kinase-like domain superfamily NIY05_14005 IPR036390 Winged helix DNA-binding domain superfamily NIY05_14005 IPR005119 LysR, substrate-binding NIY05_14005 IPR000847 Transcription regulator HTH, LysR NIY05_14005 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_14010 IPR000644 CBS domain NIY05_14010 IPR002550 CNNM, transmembrane domain NIY05_14010 IPR036318 FAD-binding, type PCMH-like superfamily NIY05_14010 IPR016169 FAD-binding, type PCMH, subdomain 2 NIY05_14010 IPR005170 Transporter-associated domain NIY05_14015 IPR014738 Citrate transporter NIY05_14015 IPR004680 Citrate transporter-like domain NIY05_14030 IPR002891 Adenylyl-sulfate kinase NIY05_14030 IPR031157 Tr-type G domain, conserved site NIY05_14030 IPR005225 Small GTP-binding protein domain NIY05_14030 IPR011779 Sulphate adenylyltransferase, large subunit NIY05_14030 IPR000795 Transcription factor, GTP-binding domain NIY05_14030 IPR009000 Translation protein, beta-barrel domain superfamily NIY05_14030 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain NIY05_14030 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NIY05_14030 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_14035 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_14035 IPR002500 Phosphoadenosine phosphosulphate reductase NIY05_14035 IPR011784 Sulphate adenylyltransferase, small subunit NIY05_14045 IPR026950 Capsule assembly protein Wzi NIY05_14045 IPR038636 Capsule assembly protein Wzi superfamily NIY05_14050 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) NIY05_14050 IPR006195 Aminoacyl-tRNA synthetase, class II NIY05_14050 IPR002313 Lysine-tRNA ligase, class II NIY05_14050 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal NIY05_14050 IPR012340 Nucleic acid-binding, OB-fold NIY05_14050 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type NIY05_14065 IPR018527 Rubredoxin, iron-binding site NIY05_14065 IPR024935 Rubredoxin domain NIY05_14065 IPR024922 Rubredoxin NIY05_14065 IPR024934 Rubredoxin-like domain NIY05_14070 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_14070 IPR023753 FAD/NAD(P)-binding domain NIY05_14070 IPR041364 Rubredoxin binding domain NIY05_14075 IPR029058 Alpha/Beta hydrolase fold NIY05_14075 IPR000073 Alpha/beta hydrolase fold-1 NIY05_14075 IPR011942 Poly(3-hydroxyalkanoate) depolymerase NIY05_14080 IPR036390 Winged helix DNA-binding domain superfamily NIY05_14080 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_14080 IPR000847 Transcription regulator HTH, LysR NIY05_14080 IPR005119 LysR, substrate-binding NIY05_14090 IPR003414 Polyphosphate kinase NIY05_14090 IPR041108 Polyphosphate kinase, C-terminal domain 1 NIY05_14090 IPR024953 Polyphosphate kinase middle domain NIY05_14090 IPR036830 Polyphosphate kinase middle domain superfamily NIY05_14090 IPR025200 Polyphosphate kinase C-terminal domain 2 NIY05_14090 IPR025198 Polyphosphate kinase N-terminal domain NIY05_14090 IPR036832 Polyphosphate kinase N-terminal domain superfamily NIY05_14095 IPR011812 Biosynthetic peptidoglycan transglycosylase NIY05_14095 IPR036950 Penicillin binding protein transglycosylase domain NIY05_14095 IPR023346 Lysozyme-like domain superfamily NIY05_14095 IPR001264 Glycosyl transferase, family 51 NIY05_14100 IPR035952 Rhomboid-like superfamily NIY05_14100 IPR022764 Peptidase S54, rhomboid domain NIY05_14105 IPR038766 Membrane component of ABC transporter, predicted NIY05_14110 IPR003593 AAA+ ATPase domain NIY05_14110 IPR003439 ABC transporter-like NIY05_14110 IPR017871 ABC transporter, conserved site NIY05_14110 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_14115 IPR036514 SGNH hydrolase superfamily NIY05_14115 IPR013830 SGNH hydrolase-type esterase domain NIY05_14120 IPR036874 Carbonic anhydrase superfamily NIY05_14120 IPR001765 Carbonic anhydrase NIY05_14120 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site NIY05_14125 IPR029058 Alpha/Beta hydrolase fold NIY05_14125 IPR000073 Alpha/beta hydrolase fold-1 NIY05_14125 IPR000639 Epoxide hydrolase-like NIY05_14135 IPR010105 TonB-dependent siderophore receptor NIY05_14135 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NIY05_14135 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_14135 IPR010917 TonB-dependent receptor, conserved site NIY05_14135 IPR012910 TonB-dependent receptor, plug domain NIY05_14135 IPR039426 Vitamin B12 transporter BtuB-like NIY05_14135 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_14140 IPR017726 Fe/S biogenesis protein NfuA NIY05_14140 IPR000361 FeS cluster biogenesis NIY05_14140 IPR034904 Fe-S cluster assembly domain superfamily NIY05_14140 IPR035903 HesB-like domain superfamily NIY05_14140 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal NIY05_14150 IPR000917 Sulfatase, N-terminal NIY05_14150 IPR017850 Alkaline-phosphatase-like, core domain superfamily NIY05_14150 IPR024607 Sulfatase, conserved site NIY05_14155 IPR042095 Sulfatase-modifying factor enzyme superfamily NIY05_14155 IPR016187 C-type lectin fold NIY05_14155 IPR005532 Sulfatase-modifying factor enzyme NIY05_14170 IPR011780 D-serine ammonia-lyase NIY05_14170 IPR001926 Pyridoxal-phosphate dependent enzyme NIY05_14170 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site NIY05_14170 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIY05_14175 IPR001204 Phosphate transporter NIY05_14180 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily NIY05_14180 IPR004223 Vitamin B12-dependent methionine synthase, activation domain NIY05_14180 IPR000489 Pterin-binding domain NIY05_14180 IPR036594 Methionine synthase domain NIY05_14180 IPR011822 Cobalamin-dependent methionine synthase NIY05_14180 IPR033706 Methionine synthase, B12-binding domain NIY05_14180 IPR011005 Dihydropteroate synthase-like NIY05_14180 IPR003726 Homocysteine-binding domain NIY05_14180 IPR036724 Cobalamin-binding domain superfamily NIY05_14180 IPR006158 Cobalamin (vitamin B12)-binding domain NIY05_14180 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain NIY05_14180 IPR036589 Homocysteine-binding domain superfamily NIY05_14185 IPR005475 Transketolase-like, pyrimidine-binding domain NIY05_14185 IPR033248 Transketolase, C-terminal domain NIY05_14185 IPR029061 Thiamin diphosphate-binding fold NIY05_14185 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II NIY05_14190 IPR029061 Thiamin diphosphate-binding fold NIY05_14190 IPR005474 Transketolase, N-terminal NIY05_14195 IPR011701 Major facilitator superfamily NIY05_14195 IPR020846 Major facilitator superfamily domain NIY05_14195 IPR036259 MFS transporter superfamily NIY05_14200 IPR036291 NAD(P)-binding domain superfamily NIY05_14200 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_14200 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_14205 IPR005119 LysR, substrate-binding NIY05_14205 IPR000847 Transcription regulator HTH, LysR NIY05_14205 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_14205 IPR036390 Winged helix DNA-binding domain superfamily NIY05_14215 IPR014718 Glycoside hydrolase-type carbohydrate-binding NIY05_14215 IPR011013 Galactose mutarotase-like domain superfamily NIY05_14215 IPR015443 Aldose 1-epimerase NIY05_14215 IPR018052 Aldose 1-epimerase, conserved site NIY05_14215 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase NIY05_14220 IPR011701 Major facilitator superfamily NIY05_14220 IPR020846 Major facilitator superfamily domain NIY05_14220 IPR036259 MFS transporter superfamily NIY05_14225 IPR037923 Transcription regulator HTH-like NIY05_14225 IPR020449 Transcription regulator HTH, AraC- type NIY05_14225 IPR018062 HTH domain AraC-type, conserved site NIY05_14225 IPR018060 DNA binding HTH domain, AraC-type NIY05_14225 IPR009057 Homeobox-like domain superfamily NIY05_14225 IPR003313 AraC-type arabinose-binding/dimerisation domain NIY05_14230 IPR036513 STAS domain superfamily NIY05_14230 IPR002645 STAS domain NIY05_14230 IPR015868 Glutaminase NIY05_14230 IPR012338 Beta-lactamase/transpeptidase-like NIY05_14235 IPR023635 Peptide deformylase NIY05_14235 IPR036821 Peptide deformylase superfamily NIY05_14240 IPR011701 Major facilitator superfamily NIY05_14240 IPR020846 Major facilitator superfamily domain NIY05_14240 IPR036259 MFS transporter superfamily NIY05_14240 IPR005829 Sugar transporter, conserved site NIY05_14250 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding NIY05_14250 IPR000399 TPP-binding enzyme, conserved site NIY05_14250 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain NIY05_14250 IPR012000 Thiamine pyrophosphate enzyme, central domain NIY05_14250 IPR012846 Acetolactate synthase, large subunit, biosynthetic NIY05_14250 IPR029035 DHS-like NAD/FAD-binding domain superfamily NIY05_14250 IPR039368 Acetolactate synthase large subunit, TPP binding domain NIY05_14250 IPR029061 Thiamin diphosphate-binding fold NIY05_14255 IPR015590 Aldehyde dehydrogenase domain NIY05_14255 IPR011264 Betaine aldehyde dehydrogenase NIY05_14255 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_14255 IPR016160 Aldehyde dehydrogenase, cysteine active site NIY05_14255 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_14255 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_14255 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NIY05_14260 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding NIY05_14260 IPR002811 Aspartate dehydrogenase NIY05_14260 IPR020626 L-aspartate dehydrogenase, prokaryotic NIY05_14260 IPR011182 L-aspartate dehydrogenase NIY05_14260 IPR036291 NAD(P)-binding domain superfamily NIY05_14265 IPR036291 NAD(P)-binding domain superfamily NIY05_14265 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_14265 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_14270 IPR000073 Alpha/beta hydrolase fold-1 NIY05_14270 IPR029058 Alpha/Beta hydrolase fold NIY05_14280 IPR036259 MFS transporter superfamily NIY05_14280 IPR000849 Sugar phosphate transporter NIY05_14280 IPR020846 Major facilitator superfamily domain NIY05_14280 IPR011701 Major facilitator superfamily NIY05_14285 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_14285 IPR023753 FAD/NAD(P)-binding domain NIY05_14285 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily NIY05_14285 IPR023744 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin--NAD(+) reductase subunit NIY05_14285 IPR028202 Reductase, C-terminal NIY05_14290 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II NIY05_14290 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NIY05_14290 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NIY05_14290 IPR017626 2,3-dihydroxybiphenyl 1,2-dioxygenase NIY05_14290 IPR037523 Vicinal oxygen chelate (VOC) domain NIY05_14295 IPR036291 NAD(P)-binding domain superfamily NIY05_14295 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_14295 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_14300 IPR017941 Rieske [2Fe-2S] iron-sulphur domain NIY05_14300 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NIY05_14310 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NIY05_14310 IPR017941 Rieske [2Fe-2S] iron-sulphur domain NIY05_14315 IPR029016 GAF-like domain superfamily NIY05_14315 IPR005471 Transcription regulator IclR, N-terminal NIY05_14315 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_14315 IPR036390 Winged helix DNA-binding domain superfamily NIY05_14315 IPR014757 Transcription regulator IclR, C-terminal NIY05_14330 IPR022852 Carnitinyl-CoA dehydratase NIY05_14330 IPR029045 ClpP/crotonase-like domain superfamily NIY05_14330 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site NIY05_14330 IPR001753 Enoyl-CoA hydratase/isomerase NIY05_14330 IPR014748 Enoyl-CoA hydratase, C-terminal NIY05_14340 IPR029044 Nucleotide-diphospho-sugar transferases NIY05_14340 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA NIY05_14340 IPR001173 Glycosyltransferase 2-like NIY05_14345 IPR002509 NodB homology domain NIY05_14345 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB NIY05_14345 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal NIY05_14345 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel NIY05_14350 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain NIY05_14355 IPR011335 Restriction endonuclease type II-like NIY05_14355 IPR009822 YaeQ NIY05_14355 IPR038590 YaeQ superfamily NIY05_14360 IPR036458 Sodium:dicarboxylate symporter superfamily NIY05_14360 IPR018107 Sodium:dicarboxylate symporter, conserved site NIY05_14360 IPR023954 C4-dicarboxylate transport protein NIY05_14360 IPR001991 Sodium:dicarboxylate symporter NIY05_14365 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NIY05_14365 IPR003495 CobW/HypB/UreG, nucleotide-binding domain NIY05_14365 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_14375 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase NIY05_14375 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain NIY05_14375 IPR029069 HotDog domain superfamily NIY05_14375 IPR006683 Thioesterase domain NIY05_14385 IPR000060 BCCT transporter family NIY05_14385 IPR018093 BCCT transporter, conserved site NIY05_14390 IPR018093 BCCT transporter, conserved site NIY05_14390 IPR000060 BCCT transporter family NIY05_14395 IPR039538 BetI-type transcriptional repressor, C-terminal NIY05_14395 IPR009057 Homeobox-like domain superfamily NIY05_14395 IPR001647 DNA-binding HTH domain, TetR-type NIY05_14395 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NIY05_14395 IPR017757 Transcriptional repressor BetI NIY05_14400 IPR011264 Betaine aldehyde dehydrogenase NIY05_14400 IPR015590 Aldehyde dehydrogenase domain NIY05_14400 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_14400 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NIY05_14400 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_14400 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_14400 IPR016160 Aldehyde dehydrogenase, cysteine active site NIY05_14405 IPR011533 Oxygen-dependent choline dehydrogenase NIY05_14405 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_14405 IPR027424 Glucose Oxidase, domain 2 NIY05_14405 IPR012132 Glucose-methanol-choline oxidoreductase NIY05_14405 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal NIY05_14405 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal NIY05_14410 IPR006231 Malate:quinone-oxidoreductase NIY05_14410 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_14420 IPR003726 Homocysteine-binding domain NIY05_14420 IPR036589 Homocysteine-binding domain superfamily NIY05_14420 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT NIY05_14425 IPR002293 Amino acid/polyamine transporter I NIY05_14425 IPR004754 Amino acid antiporter NIY05_14450 IPR016084 Haem oxygenase-like, multi-helical NIY05_14450 IPR016053 Haem oxygenase-like NIY05_14460 IPR011990 Tetratricopeptide-like helical domain superfamily NIY05_14460 IPR007655 Protein of unknown function DUF560 NIY05_14470 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NIY05_14470 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_14470 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_14470 IPR012910 TonB-dependent receptor, plug domain NIY05_14470 IPR039426 Vitamin B12 transporter BtuB-like NIY05_14480 IPR039425 RNA polymerase sigma-70 like NIY05_14480 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site NIY05_14480 IPR013324 RNA polymerase sigma factor, region 3/4-like NIY05_14480 IPR014284 RNA polymerase sigma-70 like domain NIY05_14480 IPR007627 RNA polymerase sigma-70 region 2 NIY05_14480 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 NIY05_14480 IPR013325 RNA polymerase sigma factor, region 2 NIY05_14480 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_14490 IPR020624 Schiff base-forming aldolase, conserved site NIY05_14490 IPR020625 Schiff base-forming aldolase, active site NIY05_14490 IPR002220 DapA-like NIY05_14490 IPR013785 Aldolase-type TIM barrel NIY05_14495 IPR005829 Sugar transporter, conserved site NIY05_14495 IPR036259 MFS transporter superfamily NIY05_14495 IPR005828 Major facilitator, sugar transporter-like NIY05_14495 IPR020846 Major facilitator superfamily domain NIY05_14515 IPR024918 3'-5' ssDNA/RNA exonuclease TatD NIY05_14515 IPR015991 Uncharacterised hydrolase TatD-type NIY05_14515 IPR018228 Deoxyribonuclease, TatD-related, conserved site NIY05_14515 IPR032466 Metal-dependent hydrolase NIY05_14515 IPR001130 TatD family NIY05_14530 IPR011646 KAP family P-loop domain NIY05_14530 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_14550 IPR000424 Primosome PriB/single-strand DNA-binding NIY05_14550 IPR012340 Nucleic acid-binding, OB-fold NIY05_14550 IPR011344 Single-stranded DNA-binding protein NIY05_14605 IPR013762 Integrase-like, catalytic domain superfamily NIY05_14605 IPR010998 Integrase/recombinase, N-terminal NIY05_14605 IPR025166 Integrase, DNA-binding domain NIY05_14605 IPR038488 Integrase, DNA-binding domain superfamily NIY05_14605 IPR002104 Integrase, catalytic domain NIY05_14605 IPR011010 DNA breaking-rejoining enzyme, catalytic core NIY05_14635 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_14635 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIY05_14645 IPR018306 Bacteriophage T5, Orf172 DNA-binding NIY05_14650 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_14650 IPR025669 AAA domain NIY05_14660 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIY05_14660 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_14670 IPR012338 Beta-lactamase/transpeptidase-like NIY05_14670 IPR001460 Penicillin-binding protein, transpeptidase NIY05_14750 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal NIY05_14750 IPR022637 DNA polymerase III, beta sliding clamp, central NIY05_14750 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal NIY05_14750 IPR001001 DNA polymerase III, beta sliding clamp NIY05_14790 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily NIY05_14790 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family NIY05_14940 IPR009739 Lysozyme inhibitor LprI, N-terminal NIY05_14985 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_14985 IPR002611 IstB-like ATP-binding protein NIY05_14985 IPR003593 AAA+ ATPase domain NIY05_14995 IPR001525 C-5 cytosine methyltransferase NIY05_14995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_15040 IPR001387 Cro/C1-type helix-turn-helix domain NIY05_15040 IPR010982 Lambda repressor-like, DNA-binding domain superfamily NIY05_15040 IPR015927 Peptidase S24/S26A/S26B/S26C NIY05_15040 IPR039418 LexA-like NIY05_15040 IPR036286 LexA/Signal peptidase-like superfamily NIY05_15075 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain NIY05_15075 IPR013520 Exonuclease, RNase T/DNA polymerase III NIY05_15075 IPR012337 Ribonuclease H-like superfamily NIY05_15075 IPR036397 Ribonuclease H superfamily NIY05_15145 IPR000101 Gamma-glutamyltranspeptidase NIY05_15145 IPR029055 Nucleophile aminohydrolases, N-terminal NIY05_15150 IPR004638 Drug resistance transporter EmrB-like NIY05_15150 IPR020846 Major facilitator superfamily domain NIY05_15150 IPR036259 MFS transporter superfamily NIY05_15150 IPR011701 Major facilitator superfamily NIY05_15155 IPR039562 Membrane fusion protein, biotin-lipoyl like domain NIY05_15160 IPR006683 Thioesterase domain NIY05_15160 IPR029069 HotDog domain superfamily NIY05_15160 IPR003736 Phenylacetic acid degradation-related domain NIY05_15165 IPR030656 Delta-aminolevulinic acid dehydratase, active site NIY05_15165 IPR001731 Delta-aminolevulinic acid dehydratase NIY05_15165 IPR013785 Aldolase-type TIM barrel NIY05_15170 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_15170 IPR012727 Glycine oxidase ThiO NIY05_15170 IPR006076 FAD dependent oxidoreductase NIY05_15175 IPR010099 Epimerase family protein SDR39U1 NIY05_15175 IPR036291 NAD(P)-binding domain superfamily NIY05_15175 IPR013549 Domain of unknown function DUF1731 NIY05_15175 IPR001509 NAD-dependent epimerase/dehydratase NIY05_15195 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain NIY05_15195 IPR004593 Nuclease SbcCD subunit D NIY05_15195 IPR026843 Nuclease SbcCD subunit D, C-terminal domain NIY05_15195 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type NIY05_15195 IPR029052 Metallo-dependent phosphatase-like NIY05_15200 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_15205 IPR011078 Pyridoxal phosphate homeostasis protein NIY05_15205 IPR001608 Alanine racemase, N-terminal NIY05_15205 IPR029066 PLP-binding barrel NIY05_15210 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_15210 IPR006321 Pilus retraction protein PilT NIY05_15210 IPR003593 AAA+ ATPase domain NIY05_15210 IPR001482 Type II/IV secretion system protein NIY05_15215 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_15215 IPR006321 Pilus retraction protein PilT NIY05_15215 IPR001482 Type II/IV secretion system protein NIY05_15220 IPR002481 Ferric-uptake regulator NIY05_15220 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_15220 IPR036390 Winged helix DNA-binding domain superfamily NIY05_15225 IPR026592 Outer membrane protein assembly factor BamE NIY05_15225 IPR037873 BamE-like NIY05_15225 IPR007450 Lipoprotein SmpA/OmlA NIY05_15230 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp NIY05_15230 IPR005346 RnfH protein NIY05_15230 IPR037021 RnfH superfamily NIY05_15240 IPR023504 Bacteriohemerythrin-like protein NIY05_15240 IPR012312 Haemerythrin-like NIY05_15240 IPR016131 Haemerythrin, iron-binding site NIY05_15240 IPR012827 Haemerythrin, metal-binding domain NIY05_15240 IPR035938 Hemerythrin-like superfamily NIY05_15245 IPR017932 Glutamine amidotransferase type 2 domain NIY05_15245 IPR029055 Nucleophile aminohydrolases, N-terminal NIY05_15245 IPR026869 Putative glutamine amidotransferase type 2 NIY05_15255 IPR001048 Aspartate/glutamate/uridylate kinase NIY05_15255 IPR036393 Acetylglutamate kinase-like superfamily NIY05_15255 IPR004662 Acetylglutamate kinase family NIY05_15255 IPR037528 Acetylglutamate kinase ArgB NIY05_15255 IPR041727 N-Acetyl-L-glutamate kinase, cyclic NIY05_15260 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily NIY05_15260 IPR005843 Alpha-D-phosphohexomutase, C-terminal NIY05_15260 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III NIY05_15260 IPR005841 Alpha-D-phosphohexomutase superfamily NIY05_15260 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III NIY05_15260 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I NIY05_15260 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II NIY05_15260 IPR016066 Alpha-D-phosphohexomutase, conserved site NIY05_15265 IPR033704 dUTPase, trimeric NIY05_15265 IPR029054 dUTPase-like NIY05_15265 IPR036157 dUTPase-like superfamily NIY05_15265 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase NIY05_15270 IPR014016 UvrD-like helicase, ATP-binding domain NIY05_15270 IPR034739 UvrD/AddA helicase, N-terminal NIY05_15270 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_15270 IPR005752 ATP-dependent DNA helicase Rep NIY05_15270 IPR000212 DNA helicase, UvrD/REP type NIY05_15270 IPR014017 UvrD-like DNA helicase, C-terminal NIY05_15270 IPR013986 DExx box DNA helicase domain superfamily NIY05_15275 IPR036737 OmpA-like domain superfamily NIY05_15275 IPR006665 OmpA-like domain NIY05_15275 IPR006664 Outer membrane protein, bacterial NIY05_15275 IPR039567 Glycine zipper domain NIY05_15275 IPR006690 Outer membrane protein, OmpA-like, conserved site NIY05_15280 IPR002123 Phospholipid/glycerol acyltransferase NIY05_15290 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily NIY05_15290 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal NIY05_15290 IPR013033 Septum formation inhibitor MinC NIY05_15290 IPR005526 Septum formation inhibitor MinC, C-terminal NIY05_15295 IPR025501 ATP binding protein MinD NIY05_15295 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain NIY05_15295 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_15295 IPR010223 ATP binding protein MinD, bacterial-type NIY05_15300 IPR005527 Cell division topological specificity factor MinE NIY05_15300 IPR036707 Cell division topological specificity factor MinE superfamily NIY05_15320 IPR004778 Homoserine/Threonine efflux protein NIY05_15320 IPR001123 Amino acid exporter protein, LeuE-type NIY05_15325 IPR002543 FtsK domain NIY05_15325 IPR018541 FtsK gamma domain NIY05_15325 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_15325 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_15325 IPR036390 Winged helix DNA-binding domain superfamily NIY05_15325 IPR025199 DNA translocase FtsK, 4TM region NIY05_15325 IPR041027 FtsK alpha domain NIY05_15330 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site NIY05_15330 IPR023753 FAD/NAD(P)-binding domain NIY05_15330 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_15330 IPR005982 Thioredoxin reductase NIY05_15335 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal NIY05_15335 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase NIY05_15335 IPR016181 Acyl-CoA N-acyltransferase NIY05_15340 IPR017138 Aspartate/glutamate leucyltransferase NIY05_15340 IPR016181 Acyl-CoA N-acyltransferase NIY05_15340 IPR007472 N-end rule aminoacyl transferase, C-terminal NIY05_15340 IPR007471 N-end aminoacyl transferase, N-terminal NIY05_15340 IPR030700 N-end rule aminoacyl transferase NIY05_15345 IPR006464 N-acetyltransferase RimI/Ard1 NIY05_15345 IPR016181 Acyl-CoA N-acyltransferase NIY05_15345 IPR000182 GNAT domain NIY05_15360 IPR005225 Small GTP-binding protein domain NIY05_15360 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain NIY05_15360 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal NIY05_15360 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NIY05_15360 IPR009000 Translation protein, beta-barrel domain superfamily NIY05_15360 IPR000795 Transcription factor, GTP-binding domain NIY05_15360 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle NIY05_15360 IPR031157 Tr-type G domain, conserved site NIY05_15360 IPR033720 Elongation factor Tu, domain 2 NIY05_15360 IPR004161 Translation elongation factor EFTu-like, domain 2 NIY05_15360 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_15365 IPR020568 Ribosomal protein S5 domain 2-type fold NIY05_15365 IPR035647 EF-G domain III/V-like NIY05_15365 IPR035649 EFG, domain V NIY05_15365 IPR000640 Elongation factor EFG, domain V-like NIY05_15365 IPR004161 Translation elongation factor EFTu-like, domain 2 NIY05_15365 IPR031157 Tr-type G domain, conserved site NIY05_15365 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_15365 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIY05_15365 IPR005517 Translation elongation factor EFG/EF2, domain IV NIY05_15365 IPR000795 Transcription factor, GTP-binding domain NIY05_15365 IPR009000 Translation protein, beta-barrel domain superfamily NIY05_15365 IPR004540 Translation elongation factor EFG/EF2 NIY05_15365 IPR041095 Elongation Factor G, domain II NIY05_15365 IPR005225 Small GTP-binding protein domain NIY05_15365 IPR009022 Elongation factor G, domain III NIY05_15370 IPR005717 Ribosomal protein S7, bacterial/organellar-type NIY05_15370 IPR020606 Ribosomal protein S7, conserved site NIY05_15370 IPR023798 Ribosomal protein S7 domain NIY05_15370 IPR036823 Ribosomal protein S7 domain superfamily NIY05_15370 IPR000235 Ribosomal protein S5/S7 NIY05_15375 IPR012340 Nucleic acid-binding, OB-fold NIY05_15375 IPR006032 Ribosomal protein S12/S23 NIY05_15375 IPR005679 Ribosomal protein S12, bacterial-type NIY05_15385 IPR000794 Beta-ketoacyl synthase NIY05_15385 IPR018201 Beta-ketoacyl synthase, active site NIY05_15385 IPR014031 Beta-ketoacyl synthase, C-terminal NIY05_15385 IPR014030 Beta-ketoacyl synthase, N-terminal NIY05_15385 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain NIY05_15385 IPR016039 Thiolase-like NIY05_15390 IPR005265 Protoporphyrinogen oxidase HemJ-like NIY05_15395 IPR003829 Pirin, N-terminal domain NIY05_15395 IPR008778 Pirin, C-terminal domain NIY05_15395 IPR012093 Pirin NIY05_15395 IPR014710 RmlC-like jelly roll fold NIY05_15395 IPR011051 RmlC-like cupin domain superfamily NIY05_15405 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_15405 IPR003010 Carbon-nitrogen hydrolase NIY05_15405 IPR036526 Carbon-nitrogen hydrolase superfamily NIY05_15405 IPR014445 Glutamine-dependent NAD(+) synthetase NIY05_15405 IPR022310 NAD/GMP synthase NIY05_15405 IPR003694 NAD(+) synthetase NIY05_15405 IPR000132 Nitrilase/cyanide hydratase, conserved site NIY05_15420 IPR036010 2Fe-2S ferredoxin-like superfamily NIY05_15420 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NIY05_15420 IPR017938 Riboflavin synthase-like beta-barrel NIY05_15420 IPR012675 Beta-grasp domain superfamily NIY05_15420 IPR039003 Carnitine monooxygenase reductase subunit NIY05_15420 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain NIY05_15420 IPR017927 FAD-binding domain, ferredoxin reductase-type NIY05_15420 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NIY05_15420 IPR001433 Oxidoreductase FAD/NAD(P)-binding NIY05_15420 IPR000951 Phthalate dioxygenase reductase NIY05_15420 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site NIY05_15425 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NIY05_15425 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_15425 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_15425 IPR016160 Aldehyde dehydrogenase, cysteine active site NIY05_15425 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_15425 IPR010102 Succinate semialdehyde dehydrogenase NIY05_15425 IPR015590 Aldehyde dehydrogenase domain NIY05_15430 IPR017941 Rieske [2Fe-2S] iron-sulphur domain NIY05_15430 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NIY05_15430 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site NIY05_15430 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain NIY05_15430 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit NIY05_15430 IPR039004 Carnitine monooxygenase oxygenase subunit NIY05_15435 IPR002168 Lipase, GDXG, putative histidine active site NIY05_15435 IPR033140 Lipase, GDXG, putative serine active site NIY05_15435 IPR013094 Alpha/beta hydrolase fold-3 NIY05_15435 IPR029058 Alpha/Beta hydrolase fold NIY05_15440 IPR000060 BCCT transporter family NIY05_15445 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site NIY05_15445 IPR024084 Isopropylmalate dehydrogenase-like domain NIY05_15445 IPR011829 Tartrate dehydrogenase NIY05_15450 IPR000847 Transcription regulator HTH, LysR NIY05_15450 IPR005119 LysR, substrate-binding NIY05_15450 IPR036390 Winged helix DNA-binding domain superfamily NIY05_15450 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_15470 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIY05_15470 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIY05_15475 IPR004821 Cytidyltransferase-like domain NIY05_15475 IPR001980 Phosphopantetheine adenylyltransferase NIY05_15475 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_15480 IPR023620 Small protein B NIY05_15480 IPR000037 SsrA-binding protein NIY05_15480 IPR020081 SsrA-binding protein, conserved site NIY05_15485 IPR008254 Flavodoxin/nitric oxide synthase NIY05_15485 IPR029039 Flavoprotein-like superfamily NIY05_15485 IPR005025 NADPH-dependent FMN reductase-like NIY05_15490 IPR003730 Multi-copper polyphenol oxidoreductase NIY05_15490 IPR038371 Multi-copper polyphenol oxidoreductase superfamily NIY05_15490 IPR011324 Cytotoxic necrotizing factor-like, catalytic NIY05_15495 IPR036986 RNA-binding S4 domain superfamily NIY05_15495 IPR020103 Pseudouridine synthase, catalytic domain superfamily NIY05_15495 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site NIY05_15495 IPR006145 Pseudouridine synthase, RsuA/RluA NIY05_15495 IPR002942 RNA-binding S4 domain NIY05_15495 IPR006225 Pseudouridine synthase, RluC/RluD NIY05_15500 IPR011990 Tetratricopeptide-like helical domain superfamily NIY05_15500 IPR039565 Outer membrane lipoprotein BamD-like NIY05_15500 IPR017689 Outer membrane protein assembly factor BamD NIY05_15505 IPR002694 Zinc finger, CHC2-type NIY05_15505 IPR006171 TOPRIM domain NIY05_15505 IPR034151 Bacterial DnaG primase, TOPRIM domain NIY05_15505 IPR030846 DNA primase DnaG, bacteria NIY05_15505 IPR036977 DNA Primase, CHC2-type zinc finger NIY05_15505 IPR013173 DNA primase DnaG, DnaB-binding domain NIY05_15505 IPR006295 DNA primase, DnaG NIY05_15505 IPR019475 DNA primase, DnaB-helicase binding domain NIY05_15505 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily NIY05_15505 IPR013264 DNA primase, catalytic core, N-terminal NIY05_15505 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal NIY05_15510 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal NIY05_15510 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain NIY05_15510 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase NIY05_15510 IPR018214 Glutamyl-tRNA reductase, conserved site NIY05_15510 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily NIY05_15510 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily NIY05_15510 IPR036291 NAD(P)-binding domain superfamily NIY05_15510 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase NIY05_15520 IPR004565 Outer membrane lipoprotein LolB NIY05_15520 IPR029046 Lipoprotein localisation LolA/LolB/LppX NIY05_15525 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase NIY05_15525 IPR020568 Ribosomal protein S5 domain 2-type fold NIY05_15525 IPR036554 GHMP kinase, C-terminal domain superfamily NIY05_15525 IPR006204 GHMP kinase N-terminal domain NIY05_15525 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIY05_15525 IPR013750 GHMP kinase, C-terminal domain NIY05_15550 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type NIY05_15550 IPR005946 Ribose-phosphate pyrophosphokinase NIY05_15550 IPR029057 Phosphoribosyltransferase-like NIY05_15550 IPR000836 Phosphoribosyltransferase domain NIY05_15550 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain NIY05_15550 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site NIY05_15555 IPR029751 Ribosomal protein L25 NIY05_15555 IPR020055 Ribosomal protein L25, short-form NIY05_15555 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal NIY05_15555 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily NIY05_15560 IPR001328 Peptidyl-tRNA hydrolase NIY05_15560 IPR036416 Peptidyl-tRNA hydrolase superfamily NIY05_15560 IPR018171 Peptidyl-tRNA hydrolase, conserved site NIY05_15565 IPR009010 Aspartate decarboxylase-like domain superfamily NIY05_15565 IPR003190 Aspartate decarboxylase NIY05_15580 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily NIY05_15580 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB NIY05_15590 IPR029056 Ribokinase-like NIY05_15590 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase NIY05_15590 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase NIY05_15590 IPR016084 Haem oxygenase-like, multi-helical NIY05_15590 IPR013785 Aldolase-type TIM barrel NIY05_15590 IPR004305 Thiaminase-2/PQQC NIY05_15590 IPR036206 Thiamin phosphate synthase superfamily NIY05_15590 IPR022998 Thiamine phosphate synthase/TenI NIY05_15590 IPR034291 Thiamine phosphate synthase NIY05_15595 IPR014004 Transport-associated and nodulation domain, bacteria NIY05_15595 IPR007055 BON domain NIY05_15595 IPR018392 LysM domain NIY05_15595 IPR036779 LysM domain superfamily NIY05_15600 IPR009081 Phosphopantetheine binding ACP domain NIY05_15600 IPR006162 Phosphopantetheine attachment site NIY05_15600 IPR036736 ACP-like superfamily NIY05_15600 IPR003231 Acyl carrier protein (ACP) NIY05_15605 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_15605 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_15605 IPR036291 NAD(P)-binding domain superfamily NIY05_15605 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase NIY05_15610 IPR001227 Acyl transferase domain superfamily NIY05_15610 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase NIY05_15610 IPR024925 Malonyl CoA-acyl carrier protein transacylase NIY05_15610 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type NIY05_15610 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding NIY05_15610 IPR014043 Acyl transferase NIY05_15615 IPR002677 Ribosomal protein L32p NIY05_15615 IPR011332 Zinc-binding ribosomal protein NIY05_15620 IPR003772 Large ribosomal RNA subunit accumulation protein YceD NIY05_15620 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria NIY05_15625 IPR007411 Elongation factor P hydroxylase NIY05_15630 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily NIY05_15630 IPR006070 YrdC-like domain NIY05_15635 IPR003768 Segregation and condensation protein A NIY05_15640 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_15640 IPR036390 Winged helix DNA-binding domain superfamily NIY05_15640 IPR005234 Chromosome segregation/condensation protein ScpB NIY05_15645 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain NIY05_15645 IPR020103 Pseudouridine synthase, catalytic domain superfamily NIY05_15645 IPR006145 Pseudouridine synthase, RsuA/RluA NIY05_15645 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F NIY05_15645 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site NIY05_15645 IPR002942 RNA-binding S4 domain NIY05_15645 IPR036986 RNA-binding S4 domain superfamily NIY05_15650 IPR004472 Dethiobiotin synthase BioD NIY05_15650 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_15655 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC NIY05_15655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_15660 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site NIY05_15660 IPR004839 Aminotransferase, class I/classII NIY05_15660 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type NIY05_15660 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_15660 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_15660 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_15665 IPR007197 Radical SAM NIY05_15665 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_15665 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_15665 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_15665 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA NIY05_15665 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB NIY05_15665 IPR006638 Elp3/MiaB/NifB NIY05_15665 IPR013785 Aldolase-type TIM barrel NIY05_15665 IPR010722 Biotin and thiamin synthesis-associated domain NIY05_15665 IPR005814 Aminotransferase class-III NIY05_15670 IPR029058 Alpha/Beta hydrolase fold NIY05_15670 IPR000073 Alpha/beta hydrolase fold-1 NIY05_15670 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC NIY05_15670 IPR013216 Methyltransferase type 11 NIY05_15670 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_15675 IPR023214 HAD superfamily NIY05_15675 IPR003337 Trehalose-phosphatase NIY05_15675 IPR036412 HAD-like superfamily NIY05_15675 IPR006379 HAD-superfamily hydrolase, subfamily IIB NIY05_15680 IPR001830 Glycosyl transferase, family 20 NIY05_15680 IPR012766 Alpha,alpha-trehalose-phosphate synthase NIY05_15685 IPR011701 Major facilitator superfamily NIY05_15685 IPR020846 Major facilitator superfamily domain NIY05_15685 IPR036259 MFS transporter superfamily NIY05_15690 IPR008331 Ferritin/DPS protein domain NIY05_15690 IPR009078 Ferritin-like superfamily NIY05_15690 IPR009040 Ferritin-like diiron domain NIY05_15690 IPR002024 Bacterioferritin NIY05_15690 IPR012347 Ferritin-like NIY05_15695 IPR010994 RuvA domain 2-like NIY05_15695 IPR004150 NAD-dependent DNA ligase, OB-fold NIY05_15695 IPR012340 Nucleic acid-binding, OB-fold NIY05_15695 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 NIY05_15695 IPR013840 NAD-dependent DNA ligase, N-terminal NIY05_15695 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type NIY05_15695 IPR001679 NAD-dependent DNA ligase NIY05_15695 IPR033136 NAD-dependent DNA ligase, conserved site NIY05_15695 IPR018239 NAD-dependent DNA ligase, active site NIY05_15695 IPR041663 DisA/LigA, helix-hairpin-helix motif NIY05_15695 IPR036420 BRCT domain superfamily NIY05_15695 IPR001357 BRCT domain NIY05_15695 IPR013839 NAD-dependent DNA ligase, adenylation NIY05_15705 IPR011890 Structural maintenance of chromosomes protein, prokaryotic NIY05_15705 IPR036277 SMCs flexible hinge superfamily NIY05_15705 IPR010935 SMCs flexible hinge NIY05_15705 IPR003395 RecF/RecN/SMC, N-terminal NIY05_15705 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_15705 IPR024704 Structural maintenance of chromosomes protein NIY05_15715 IPR002781 Transmembrane protein TauE-like NIY05_15725 IPR004619 Type III pantothenate kinase NIY05_15730 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily NIY05_15730 IPR022941 Signal recognition particle, SRP54 subunit NIY05_15730 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain NIY05_15730 IPR004780 Signal recognition particle protein NIY05_15730 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_15730 IPR013822 Signal recognition particle SRP54, helical bundle NIY05_15730 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily NIY05_15730 IPR003593 AAA+ ATPase domain NIY05_15730 IPR004125 Signal recognition particle, SRP54 subunit, M-domain NIY05_15740 IPR013785 Aldolase-type TIM barrel NIY05_15740 IPR035587 DUS-like, FMN-binding domain NIY05_15740 IPR032886 tRNA-dihydrouridine(16) synthase NIY05_15740 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal NIY05_15740 IPR001269 tRNA-dihydrouridine synthase NIY05_15740 IPR018517 tRNA-dihydrouridine synthase, conserved site NIY05_15780 IPR033704 dUTPase, trimeric NIY05_15780 IPR011962 dCTP deaminase NIY05_15780 IPR029054 dUTPase-like NIY05_15780 IPR036157 dUTPase-like superfamily NIY05_15795 IPR010049 MTA/SAH nucleosidase NIY05_15795 IPR000845 Nucleoside phosphorylase domain NIY05_15795 IPR035994 Nucleoside phosphorylase superfamily NIY05_15800 IPR034904 Fe-S cluster assembly domain superfamily NIY05_15800 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_15800 IPR000808 Mrp, conserved site NIY05_15800 IPR019591 Mrp/NBP35 ATP-binding protein NIY05_15800 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 NIY05_15810 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding NIY05_15810 IPR002547 tRNA-binding domain NIY05_15810 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_15810 IPR012340 Nucleic acid-binding, OB-fold NIY05_15810 IPR029038 Methionyl-tRNA synthetase, Zn-domain NIY05_15810 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NIY05_15810 IPR015413 Methionyl/Leucyl tRNA synthetase NIY05_15810 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain NIY05_15810 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal NIY05_15810 IPR033911 Methioninyl-tRNA synthetase core domain NIY05_15810 IPR023458 Methionine-tRNA ligase, type 1 NIY05_15810 IPR014758 Methionyl-tRNA synthetase NIY05_15835 IPR039562 Membrane fusion protein, biotin-lipoyl like domain NIY05_15840 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase NIY05_15840 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIY05_15840 IPR001926 Pyridoxal-phosphate dependent enzyme NIY05_15840 IPR005966 D-cysteine desulfhydrase NIY05_15845 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like NIY05_15845 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_15845 IPR023166 HI0933-like insert domain superfamily NIY05_15855 IPR008910 Conserved TM helix NIY05_15870 IPR017938 Riboflavin synthase-like beta-barrel NIY05_15870 IPR033892 Ferredoxin--NADP reductase, bacteria NIY05_15870 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase NIY05_15870 IPR017927 FAD-binding domain, ferredoxin reductase-type NIY05_15870 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain NIY05_15870 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NIY05_15870 IPR001433 Oxidoreductase FAD/NAD(P)-binding NIY05_15875 IPR036390 Winged helix DNA-binding domain superfamily NIY05_15875 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_15875 IPR000847 Transcription regulator HTH, LysR NIY05_15875 IPR005119 LysR, substrate-binding NIY05_15880 IPR019844 Cold-shock (CSD) domain NIY05_15880 IPR011129 Cold shock domain NIY05_15880 IPR012156 Cold shock, CspA NIY05_15880 IPR012340 Nucleic acid-binding, OB-fold NIY05_15880 IPR002059 Cold-shock protein, DNA-binding NIY05_15885 IPR034332 Uracil phosphoribosyltransferase, bacterial-type NIY05_15885 IPR005765 Uracil phosphoribosyl transferase NIY05_15885 IPR029057 Phosphoribosyltransferase-like NIY05_15885 IPR000836 Phosphoribosyltransferase domain NIY05_15890 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit NIY05_15890 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 NIY05_15895 IPR003918 NADH:ubiquinone oxidoreductase NIY05_15895 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit NIY05_15895 IPR010227 NADH-quinone oxidoreductase, chain M/4 NIY05_15900 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 NIY05_15900 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup NIY05_15900 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit NIY05_15900 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal NIY05_15905 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like NIY05_15905 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K NIY05_15910 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ NIY05_15910 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 NIY05_15915 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIY05_15915 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NIY05_15915 IPR010226 NADH-quinone oxidoreductase, chain I NIY05_15920 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H NIY05_15920 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site NIY05_15925 IPR036010 2Fe-2S ferredoxin-like superfamily NIY05_15925 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding NIY05_15925 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NIY05_15925 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site NIY05_15925 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain NIY05_15925 IPR006656 Molybdopterin oxidoreductase NIY05_15925 IPR009010 Aspartate decarboxylase-like domain superfamily NIY05_15925 IPR010228 NADH:ubiquinone oxidoreductase, subunit G NIY05_15930 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site NIY05_15930 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain NIY05_15930 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily NIY05_15930 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain NIY05_15930 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily NIY05_15930 IPR019554 Soluble ligand binding domain NIY05_15930 IPR011537 NADH ubiquinone oxidoreductase, F subunit NIY05_15935 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal NIY05_15935 IPR036249 Thioredoxin-like superfamily NIY05_15935 IPR042128 NuoE domain NIY05_15935 IPR002023 NADH-quinone oxidoreductase subunit E-like NIY05_15940 IPR023062 NADH dehydrogenase, subunit CD NIY05_15940 IPR001135 NADH-quinone oxidoreductase, subunit D NIY05_15940 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily NIY05_15940 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily NIY05_15940 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit NIY05_15940 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site NIY05_15940 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site NIY05_15940 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H NIY05_15940 IPR029014 [NiFe]-hydrogenase, large subunit NIY05_15940 IPR010218 NADH dehydrogenase, subunit C NIY05_15945 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit NIY05_15945 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit NIY05_15950 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 NIY05_15950 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid NIY05_15950 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily NIY05_15955 IPR029787 Nucleotide cyclase NIY05_15955 IPR000160 GGDEF domain NIY05_15955 IPR033416 Periplasmic sensor domain CHASE7 NIY05_15965 IPR003660 HAMP domain NIY05_15965 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_15965 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_15965 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NIY05_15965 IPR005467 Histidine kinase domain NIY05_15965 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NIY05_15965 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NIY05_15970 IPR016032 Signal transduction response regulator, C-terminal effector NIY05_15970 IPR011006 CheY-like superfamily NIY05_15970 IPR001867 OmpR/PhoB-type DNA-binding domain NIY05_15970 IPR001789 Signal transduction response regulator, receiver domain NIY05_15970 IPR039420 Transcriptional regulatory protein WalR-like NIY05_15970 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_15980 IPR039718 Ribonucleoside-diphosphate reductase large subunit NIY05_15980 IPR013509 Ribonucleotide reductase large subunit, N-terminal NIY05_15980 IPR000788 Ribonucleotide reductase large subunit, C-terminal NIY05_15980 IPR013346 Ribonucleotide reductase, class I , alpha subunit NIY05_15980 IPR005144 ATP-cone domain NIY05_15980 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal NIY05_15990 IPR009078 Ferritin-like superfamily NIY05_15990 IPR012348 Ribonucleotide reductase-like NIY05_15990 IPR033909 Ribonucleotide reductase small subunit NIY05_15990 IPR000358 Ribonucleotide reductase small subunit family NIY05_16000 IPR025919 Stimulus-sensing domain NIY05_16000 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NIY05_16000 IPR025908 Sensor N-terminal transmembrane domain NIY05_16000 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NIY05_16000 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NIY05_16000 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_16000 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_16000 IPR003660 HAMP domain NIY05_16000 IPR005467 Histidine kinase domain NIY05_16070 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIY05_16070 IPR001479 Quinoprotein dehydrogenase, conserved site NIY05_16070 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NIY05_16070 IPR002372 Pyrrolo-quinoline quinone repeat NIY05_16070 IPR017511 PQQ-dependent membrane bound dehydrogenase NIY05_16095 IPR003719 Phenazine biosynthesis PhzF protein NIY05_16120 IPR002563 Flavin reductase like domain NIY05_16120 IPR019917 FMN reductase (NADH) RutF NIY05_16120 IPR012349 FMN-binding split barrel NIY05_16125 IPR038071 UROD/MetE-like superfamily NIY05_16125 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal NIY05_16125 IPR006276 Cobalamin-independent methionine synthase NIY05_16125 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal NIY05_16135 IPR000847 Transcription regulator HTH, LysR NIY05_16135 IPR005119 LysR, substrate-binding NIY05_16135 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_16135 IPR036390 Winged helix DNA-binding domain superfamily NIY05_16140 IPR001123 Amino acid exporter protein, LeuE-type NIY05_16150 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal NIY05_16150 IPR009057 Homeobox-like domain superfamily NIY05_16150 IPR018060 DNA binding HTH domain, AraC-type NIY05_16150 IPR020449 Transcription regulator HTH, AraC- type NIY05_16155 IPR017439 Amidohydrolase NIY05_16155 IPR036264 Bacterial exopeptidase dimerisation domain NIY05_16155 IPR002933 Peptidase M20 NIY05_16155 IPR011650 Peptidase M20, dimerisation domain NIY05_16165 IPR036390 Winged helix DNA-binding domain superfamily NIY05_16165 IPR000847 Transcription regulator HTH, LysR NIY05_16165 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_16165 IPR005119 LysR, substrate-binding NIY05_16170 IPR005829 Sugar transporter, conserved site NIY05_16170 IPR004736 MFS transporter, metabolite:H symporter NIY05_16170 IPR011701 Major facilitator superfamily NIY05_16170 IPR020846 Major facilitator superfamily domain NIY05_16170 IPR036259 MFS transporter superfamily NIY05_16180 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_16180 IPR000847 Transcription regulator HTH, LysR NIY05_16180 IPR005119 LysR, substrate-binding NIY05_16180 IPR036390 Winged helix DNA-binding domain superfamily NIY05_16185 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain NIY05_16185 IPR010960 Flavocytochrome c NIY05_16185 IPR011031 Multihaem cytochrome NIY05_16185 IPR036280 Multiheme cytochrome superfamily NIY05_16185 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily NIY05_16185 IPR012286 Tetrahaem cytochrome domain NIY05_16185 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_16190 IPR012830 Citrate utilization protein B NIY05_16190 IPR036197 NarG-like superfamily NIY05_16195 IPR003673 CoA-transferase family III NIY05_16195 IPR023606 CoA-transferase family III domain superfamily NIY05_16200 IPR036259 MFS transporter superfamily NIY05_16200 IPR011701 Major facilitator superfamily NIY05_16200 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family NIY05_16200 IPR020846 Major facilitator superfamily domain NIY05_16200 IPR005829 Sugar transporter, conserved site NIY05_16205 IPR006089 Acyl-CoA dehydrogenase, conserved site NIY05_16205 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_16205 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_16205 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_16205 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_16205 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_16205 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_16210 IPR036390 Winged helix DNA-binding domain superfamily NIY05_16210 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_16210 IPR000847 Transcription regulator HTH, LysR NIY05_16210 IPR005119 LysR, substrate-binding NIY05_16215 IPR036291 NAD(P)-binding domain superfamily NIY05_16215 IPR020843 Polyketide synthase, enoylreductase domain NIY05_16215 IPR013149 Alcohol dehydrogenase, C-terminal NIY05_16215 IPR013154 Alcohol dehydrogenase, N-terminal NIY05_16215 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site NIY05_16215 IPR011032 GroES-like superfamily NIY05_16220 IPR032466 Metal-dependent hydrolase NIY05_16220 IPR028893 Adenosine deaminase NIY05_16220 IPR001365 Adenosine/AMP deaminase domain NIY05_16220 IPR006650 Adenosine/AMP deaminase active site NIY05_16220 IPR006330 Adenosine/adenine deaminase NIY05_16245 IPR003473 Quinolinate synthetase A NIY05_16245 IPR023513 Quinolinate synthase A, type 1 NIY05_16245 IPR036094 Quinolinate synthetase A superfamily NIY05_16250 IPR002813 Arginine biosynthesis protein ArgJ NIY05_16250 IPR042195 ArgJ beta chain, C-terminal domain NIY05_16250 IPR016117 ArgJ-like domain superfamily NIY05_16255 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily NIY05_16255 IPR023546 Methylated-DNA--protein-cysteine methyltransferase NIY05_16255 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain NIY05_16255 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain NIY05_16255 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding NIY05_16255 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site NIY05_16255 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_16260 IPR000390 Small multidrug resistance protein family NIY05_16270 IPR007939 Copper resistance B precursor NIY05_16275 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NIY05_16275 IPR006311 Twin-arginine translocation pathway, signal sequence NIY05_16275 IPR034279 Copper resistance protein, third cupredoxin domain NIY05_16275 IPR033138 Multicopper oxidases, conserved site NIY05_16275 IPR034284 Copper resistance protein, first cupredoxin domain NIY05_16275 IPR008972 Cupredoxin NIY05_16275 IPR002355 Multicopper oxidase, copper-binding site NIY05_16275 IPR001117 Multicopper oxidase, type 1 NIY05_16275 IPR006376 Copper-resistance protein CopA NIY05_16275 IPR011707 Multicopper oxidase, type 3 NIY05_16275 IPR011706 Multicopper oxidase, type 2 NIY05_16275 IPR034282 Copper resistance protein CopA, second cupredoxin domain NIY05_16285 IPR023214 HAD superfamily NIY05_16285 IPR036412 HAD-like superfamily NIY05_16285 IPR000150 Cof family NIY05_16285 IPR006379 HAD-superfamily hydrolase, subfamily IIB NIY05_16290 IPR013785 Aldolase-type TIM barrel NIY05_16290 IPR026019 Ribulose-phosphate 3-epimerase NIY05_16290 IPR000056 Ribulose-phosphate 3-epimerase-like NIY05_16290 IPR011060 Ribulose-phosphate binding barrel NIY05_16300 IPR014186 S-formylglutathione hydrolase NIY05_16300 IPR029058 Alpha/Beta hydrolase fold NIY05_16300 IPR000801 Putative esterase NIY05_16310 IPR007536 Ribosomal RNA small subunit methyltransferase J NIY05_16310 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_16315 IPR000905 Gcp-like domain NIY05_16315 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB NIY05_16320 IPR001451 Hexapeptide repeat NIY05_16320 IPR011004 Trimeric LpxA-like superfamily NIY05_16325 IPR015797 NUDIX hydrolase-like domain superfamily NIY05_16325 IPR000086 NUDIX hydrolase domain NIY05_16325 IPR000059 NUDIX hydrolase, NudL, conserved site NIY05_16325 IPR023735 Uncharacterised nudix hydrolase NudL NIY05_16365 IPR019999 Anthranilate synthase component I-like NIY05_16365 IPR005802 Aminodeoxychorismate synthase, component I NIY05_16365 IPR005801 ADC synthase NIY05_16365 IPR015890 Chorismate-utilising enzyme, C-terminal NIY05_16365 IPR006805 Anthranilate synthase component I, N-terminal NIY05_16370 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_16370 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_16370 IPR004839 Aminotransferase, class I/classII NIY05_16370 IPR005861 Histidinol-phosphate aminotransferase family NIY05_16370 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_16375 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_16375 IPR001692 Histidinol dehydrogenase, conserved site NIY05_16375 IPR022695 Histidinol dehydrogenase, monofunctional NIY05_16375 IPR012131 Histidinol dehydrogenase NIY05_16380 IPR018198 ATP phosphoribosyltransferase, conserved site NIY05_16380 IPR001348 ATP phosphoribosyltransferase HisG NIY05_16380 IPR024893 ATP phosphoribosyltransferase HisG, short form NIY05_16380 IPR013820 ATP phosphoribosyltransferase, catalytic domain NIY05_16385 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase NIY05_16385 IPR002110 Ankyrin repeat NIY05_16385 IPR020683 Ankyrin repeat-containing domain NIY05_16385 IPR001986 Enolpyruvate transferase domain NIY05_16385 IPR036968 Enolpyruvate transferase domain superfamily NIY05_16385 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta NIY05_16390 IPR002634 BolA protein NIY05_16390 IPR036065 BolA-like superfamily NIY05_16395 IPR036567 Ribosome hibernation promotion factor-like NIY05_16395 IPR003489 Ribosome hibernation promoting factor/RaiA NIY05_16400 IPR000394 RNA polymerase sigma factor 54 NIY05_16400 IPR007046 RNA polymerase sigma factor 54, core-binding domain NIY05_16400 IPR007634 RNA polymerase sigma factor 54, DNA-binding NIY05_16400 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily NIY05_16445 IPR003010 Carbon-nitrogen hydrolase NIY05_16445 IPR036526 Carbon-nitrogen hydrolase superfamily NIY05_16445 IPR001110 Uncharacterised protein family UPF0012, conserved site NIY05_16455 IPR036390 Winged helix DNA-binding domain superfamily NIY05_16455 IPR000835 MarR-type HTH domain NIY05_16455 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_16460 IPR015946 K homology domain-like, alpha/beta NIY05_16460 IPR019953 Organic hydroperoxide resistance protein famiy NIY05_16460 IPR003718 OsmC/Ohr family NIY05_16460 IPR036102 OsmC/Ohr superfamily NIY05_16465 IPR042181 Type II secretion system, protein E, N-terminal NIY05_16465 IPR013369 Type II secretion system GspE NIY05_16465 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_16465 IPR001482 Type II/IV secretion system protein NIY05_16465 IPR037257 General secretory system II, protein E, N-terminal superfamily NIY05_16485 IPR036397 Ribonuclease H superfamily NIY05_16485 IPR012337 Ribonuclease H-like superfamily NIY05_16485 IPR029060 PIN-like domain superfamily NIY05_16485 IPR002298 DNA polymerase A NIY05_16485 IPR018320 DNA polymerase 1 NIY05_16485 IPR008918 Helix-hairpin-helix motif, class 2 NIY05_16485 IPR001098 DNA-directed DNA polymerase, family A, palm domain NIY05_16485 IPR019760 DNA-directed DNA polymerase, family A, conserved site NIY05_16485 IPR036279 5'-3' exonuclease, C-terminal domain superfamily NIY05_16485 IPR002421 5'-3' exonuclease, N-terminal NIY05_16485 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal NIY05_16485 IPR002562 3'-5' exonuclease domain NIY05_16485 IPR020045 DNA polymerase I-like, H3TH domain NIY05_16490 IPR003425 CCB3/YggT NIY05_16495 IPR036291 NAD(P)-binding domain superfamily NIY05_16495 IPR000304 Pyrroline-5-carboxylate reductase NIY05_16495 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain NIY05_16495 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal NIY05_16495 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NIY05_16500 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal NIY05_16500 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain NIY05_16500 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal NIY05_16500 IPR012094 tRNA(Ile)-lysidine synthase NIY05_16500 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_16500 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal NIY05_16505 IPR029045 ClpP/crotonase-like domain superfamily NIY05_16505 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal NIY05_16505 IPR001095 Acetyl-CoA carboxylase, alpha subunit NIY05_16510 IPR022371 Exopolyphosphatase NIY05_16510 IPR003695 Ppx/GppA phosphatase NIY05_16510 IPR030673 Pyrophosphatase, GppA/Ppx-type NIY05_16515 IPR005746 Thioredoxin NIY05_16515 IPR013766 Thioredoxin domain NIY05_16515 IPR017937 Thioredoxin, conserved site NIY05_16515 IPR036249 Thioredoxin-like superfamily NIY05_16520 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain NIY05_16520 IPR003593 AAA+ ATPase domain NIY05_16520 IPR004665 Transcription termination factor Rho NIY05_16520 IPR011113 Rho termination factor, RNA-binding domain NIY05_16520 IPR036269 Rho termination factor, N-terminal domain superfamily NIY05_16520 IPR041703 Transcription termination factor Rho, ATP binding domain NIY05_16520 IPR011112 Rho termination factor, N-terminal NIY05_16520 IPR011129 Cold shock domain NIY05_16520 IPR012340 Nucleic acid-binding, OB-fold NIY05_16520 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_16535 IPR005684 Integration host factor, alpha subunit NIY05_16535 IPR000119 Histone-like DNA-binding protein NIY05_16535 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily NIY05_16535 IPR020816 Histone-like DNA-binding protein, conserved site NIY05_16540 IPR005146 B3/B4 tRNA-binding domain NIY05_16540 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain NIY05_16540 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain NIY05_16540 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 NIY05_16540 IPR005147 tRNA synthetase, B5-domain NIY05_16540 IPR012340 Nucleic acid-binding, OB-fold NIY05_16540 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily NIY05_16540 IPR005121 Ferrodoxin-fold anticodon-binding domain NIY05_16540 IPR009061 Putative DNA-binding domain superfamily NIY05_16540 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit NIY05_16540 IPR002547 tRNA-binding domain NIY05_16545 IPR006195 Aminoacyl-tRNA synthetase, class II NIY05_16545 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit NIY05_16545 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal NIY05_16545 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial NIY05_16545 IPR002319 Phenylalanyl-tRNA synthetase NIY05_16545 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm NIY05_16565 IPR005813 Ribosomal protein L20 NIY05_16565 IPR035566 Ribosomal protein L20, C-terminal NIY05_16570 IPR037229 Ribosomal protein L35 superfamily NIY05_16570 IPR018265 Ribosomal protein L35, conserved site NIY05_16570 IPR021137 Ribosomal protein L35 NIY05_16570 IPR001706 Ribosomal protein L35, non-mitochondrial NIY05_16580 IPR004751 Drug antiporter protein NIY05_16580 IPR011701 Major facilitator superfamily NIY05_16580 IPR020846 Major facilitator superfamily domain NIY05_16580 IPR036259 MFS transporter superfamily NIY05_16585 IPR032816 SNARE associated Golgi protein NIY05_16590 IPR010987 Glutathione S-transferase, C-terminal-like NIY05_16590 IPR036282 Glutathione S-transferase, C-terminal domain superfamily NIY05_16590 IPR004045 Glutathione S-transferase, N-terminal NIY05_16590 IPR004046 Glutathione S-transferase, C-terminal NIY05_16590 IPR036249 Thioredoxin-like superfamily NIY05_16595 IPR019814 Translation initiation factor 3, N-terminal NIY05_16595 IPR019815 Translation initiation factor 3, C-terminal NIY05_16595 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily NIY05_16595 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily NIY05_16595 IPR001288 Translation initiation factor 3 NIY05_16600 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) NIY05_16600 IPR006195 Aminoacyl-tRNA synthetase, class II NIY05_16600 IPR004154 Anticodon-binding NIY05_16600 IPR036621 Anticodon-binding domain superfamily NIY05_16600 IPR012675 Beta-grasp domain superfamily NIY05_16600 IPR004095 TGS NIY05_16600 IPR012676 TGS-like NIY05_16600 IPR002320 Threonine-tRNA ligase, class IIa NIY05_16600 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily NIY05_16600 IPR033728 Threonine-tRNA ligase catalytic core domain NIY05_16600 IPR012947 Threonyl/alanyl tRNA synthetase, SAD NIY05_16605 IPR042099 AMP-dependent synthetase-like superfamily NIY05_16605 IPR000873 AMP-dependent synthetase/ligase NIY05_16605 IPR025110 AMP-binding enzyme, C-terminal domain NIY05_16605 IPR020845 AMP-binding, conserved site NIY05_16610 IPR023153 PSPTO4464-like domain superfamily NIY05_16610 IPR006839 Ribosome-associated, YjgA NIY05_16615 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site NIY05_16615 IPR035895 HPr-like superfamily NIY05_16615 IPR000032 Phosphocarrier protein HPr-like NIY05_16615 IPR002114 Phosphotransferase system, HPr serine phosphorylation site NIY05_16620 IPR005337 RapZ-like family NIY05_16620 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_16625 IPR004821 Cytidyltransferase-like domain NIY05_16625 IPR003721 Pantoate-beta-alanine ligase NIY05_16625 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain NIY05_16625 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_16630 IPR003700 Ketopantoate hydroxymethyltransferase NIY05_16630 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily NIY05_16630 IPR040442 Pyruvate kinase-like domain superfamily NIY05_16635 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK NIY05_16635 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily NIY05_16640 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain NIY05_16640 IPR025866 Polymerase A arginine-rich C-terminal domain NIY05_16640 IPR010206 Poly(A) polymerase I NIY05_16640 IPR002646 Poly A polymerase, head domain NIY05_16645 IPR004509 Competence protein ComEA, helix-hairpin-helix domain NIY05_16645 IPR010994 RuvA domain 2-like NIY05_16650 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core NIY05_16650 IPR011551 NTP pyrophosphohydrolase MazG NIY05_16655 IPR036291 NAD(P)-binding domain superfamily NIY05_16655 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_16655 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_16660 IPR033655 RelA, TGS domain NIY05_16660 IPR012676 TGS-like NIY05_16660 IPR004095 TGS NIY05_16660 IPR003607 HD/PDEase domain NIY05_16660 IPR007685 RelA/SpoT NIY05_16660 IPR004811 RelA/SpoT family NIY05_16660 IPR002912 ACT domain NIY05_16660 IPR012675 Beta-grasp domain superfamily NIY05_16665 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD NIY05_16665 IPR030390 RNA methyltransferase TrmA, active site NIY05_16665 IPR012340 Nucleic acid-binding, OB-fold NIY05_16665 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_16665 IPR002792 TRAM domain NIY05_16665 IPR010280 (Uracil-5)-methyltransferase family NIY05_16675 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIY05_16675 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site NIY05_16675 IPR005858 Cysteine synthase CysM NIY05_16675 IPR005856 Cysteine synthase NIY05_16675 IPR001926 Pyridoxal-phosphate dependent enzyme NIY05_16680 IPR036641 HPT domain superfamily NIY05_16680 IPR001789 Signal transduction response regulator, receiver domain NIY05_16680 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain NIY05_16680 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NIY05_16680 IPR019247 Histidine kinase BarA, N-terminal NIY05_16680 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_16680 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NIY05_16680 IPR005467 Histidine kinase domain NIY05_16680 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_16680 IPR011006 CheY-like superfamily NIY05_16680 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NIY05_16680 IPR003660 HAMP domain NIY05_16685 IPR001753 Enoyl-CoA hydratase/isomerase NIY05_16685 IPR029045 ClpP/crotonase-like domain superfamily NIY05_16685 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site NIY05_16690 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NIY05_16690 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site NIY05_16690 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain NIY05_16690 IPR015815 3-hydroxyisobutyrate dehydrogenase-related NIY05_16690 IPR036291 NAD(P)-binding domain superfamily NIY05_16690 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding NIY05_16690 IPR013328 6-phosphogluconate dehydrogenase, domain 2 NIY05_16695 IPR013022 Xylose isomerase-like, TIM barrel domain NIY05_16695 IPR026040 Hydroxypyruvate isomerase-like NIY05_16695 IPR036237 Xylose isomerase-like superfamily NIY05_16700 IPR004394 Protein Iojap/ribosomal silencing factor RsfS NIY05_16705 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_16705 IPR005979 Light-dependent protochlorophyllide reductase NIY05_16705 IPR036291 NAD(P)-binding domain superfamily NIY05_16710 IPR034300 NADP transhydrogenase beta-like domain NIY05_16710 IPR012136 NADP transhydrogenase, beta subunit NIY05_16710 IPR029035 DHS-like NAD/FAD-binding domain superfamily NIY05_16715 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal NIY05_16720 IPR036291 NAD(P)-binding domain superfamily NIY05_16720 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain NIY05_16720 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal NIY05_16720 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 NIY05_16720 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 NIY05_16725 IPR000620 EamA domain NIY05_16735 IPR036259 MFS transporter superfamily NIY05_16735 IPR011701 Major facilitator superfamily NIY05_16735 IPR020846 Major facilitator superfamily domain NIY05_16740 IPR004653 tRNA-dihydrouridine(20/20a) synthase NIY05_16740 IPR035587 DUS-like, FMN-binding domain NIY05_16740 IPR013785 Aldolase-type TIM barrel NIY05_16740 IPR001269 tRNA-dihydrouridine synthase NIY05_16740 IPR018517 tRNA-dihydrouridine synthase, conserved site NIY05_16750 IPR000847 Transcription regulator HTH, LysR NIY05_16750 IPR036390 Winged helix DNA-binding domain superfamily NIY05_16750 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_16750 IPR005119 LysR, substrate-binding NIY05_16750 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain NIY05_16760 IPR000594 THIF-type NAD/FAD binding fold NIY05_16760 IPR035985 Ubiquitin-activating enzyme NIY05_16770 IPR036008 Aconitase, iron-sulfur domain NIY05_16770 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 NIY05_16770 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain NIY05_16770 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NIY05_16770 IPR006249 Aconitase/Iron-responsive element-binding protein 2 NIY05_16770 IPR018136 Aconitase family, 4Fe-4S cluster binding site NIY05_16770 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain NIY05_16775 IPR001130 TatD family NIY05_16775 IPR018228 Deoxyribonuclease, TatD-related, conserved site NIY05_16775 IPR015991 Uncharacterised hydrolase TatD-type NIY05_16775 IPR032466 Metal-dependent hydrolase NIY05_16790 IPR035647 EF-G domain III/V-like NIY05_16790 IPR009000 Translation protein, beta-barrel domain superfamily NIY05_16790 IPR000795 Transcription factor, GTP-binding domain NIY05_16790 IPR005225 Small GTP-binding protein domain NIY05_16790 IPR041732 Peptide chain release factor 3, GTP-binding domain NIY05_16790 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily NIY05_16790 IPR032090 Peptide chain release factor 3, C-terminal NIY05_16790 IPR004548 Peptide chain release factor 3 NIY05_16790 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_16790 IPR031157 Tr-type G domain, conserved site NIY05_16790 IPR004161 Translation elongation factor EFTu-like, domain 2 NIY05_16810 IPR029787 Nucleotide cyclase NIY05_16810 IPR005330 MHYT domain NIY05_16810 IPR000160 GGDEF domain NIY05_16810 IPR035919 EAL domain superfamily NIY05_16810 IPR001633 EAL domain NIY05_16815 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NIY05_16815 IPR013023 Ketol-acid reductoisomerase NIY05_16815 IPR000506 Ketol-acid reductoisomerase, C-terminal NIY05_16815 IPR013116 Ketol-acid reductoisomerase, N-terminal NIY05_16815 IPR014359 Ketol-acid reductoisomerase, prokaryotic NIY05_16815 IPR036291 NAD(P)-binding domain superfamily NIY05_16820 IPR019455 Acetolactate synthase, small subunit, C-terminal NIY05_16820 IPR004789 Acetolactate synthase, small subunit NIY05_16820 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal NIY05_16820 IPR002912 ACT domain NIY05_16820 IPR039557 AHAS, ACT domain NIY05_16825 IPR039368 Acetolactate synthase large subunit, TPP binding domain NIY05_16825 IPR029035 DHS-like NAD/FAD-binding domain superfamily NIY05_16825 IPR000399 TPP-binding enzyme, conserved site NIY05_16825 IPR029061 Thiamin diphosphate-binding fold NIY05_16825 IPR012846 Acetolactate synthase, large subunit, biosynthetic NIY05_16825 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain NIY05_16825 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding NIY05_16825 IPR012000 Thiamine pyrophosphate enzyme, central domain NIY05_16835 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding NIY05_16835 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain NIY05_16835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_16835 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NIY05_16835 IPR002300 Aminoacyl-tRNA synthetase, class Ia NIY05_16835 IPR015413 Methionyl/Leucyl tRNA synthetase NIY05_16835 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding NIY05_16835 IPR025709 Leucyl-tRNA synthetase, editing domain NIY05_16835 IPR002302 Leucine-tRNA ligase NIY05_16850 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NIY05_16850 IPR030190 Macrolide export protein MacA NIY05_16850 IPR006143 RND efflux pump, membrane fusion protein NIY05_16855 IPR003593 AAA+ ATPase domain NIY05_16855 IPR003838 ABC transporter permease protein domain NIY05_16855 IPR017871 ABC transporter, conserved site NIY05_16855 IPR003439 ABC transporter-like NIY05_16855 IPR017911 ABC transporter, macrolide export, ATP-binding domain NIY05_16855 IPR025857 MacB-like periplasmic core domain NIY05_16855 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_16860 IPR010131 RND efflux system, outer membrane lipoprotein, NodT NIY05_16860 IPR003423 Outer membrane efflux protein NIY05_16865 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_16865 IPR036291 NAD(P)-binding domain superfamily NIY05_16865 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) NIY05_16875 IPR022894 Oligoribonuclease NIY05_16875 IPR013520 Exonuclease, RNase T/DNA polymerase III NIY05_16875 IPR036397 Ribonuclease H superfamily NIY05_16875 IPR012337 Ribonuclease H-like superfamily NIY05_16880 IPR012340 Nucleic acid-binding, OB-fold NIY05_16880 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain NIY05_16880 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_16880 IPR004881 Ribosome biogenesis GTPase RsgA NIY05_16880 IPR010914 RsgA GTPase domain NIY05_16890 IPR011900 Glutaredoxin, GrxC NIY05_16890 IPR036249 Thioredoxin-like superfamily NIY05_16890 IPR002109 Glutaredoxin NIY05_16890 IPR011767 Glutaredoxin active site NIY05_16890 IPR014025 Glutaredoxin subgroup NIY05_16895 IPR003708 Bacterial protein export chaperone SecB NIY05_16895 IPR035958 SecB-like superfamily NIY05_16910 IPR014030 Beta-ketoacyl synthase, N-terminal NIY05_16910 IPR014031 Beta-ketoacyl synthase, C-terminal NIY05_16910 IPR000794 Beta-ketoacyl synthase NIY05_16910 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 NIY05_16910 IPR016039 Thiolase-like NIY05_16910 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain NIY05_16910 IPR018201 Beta-ketoacyl synthase, active site NIY05_16915 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative NIY05_16915 IPR036291 NAD(P)-binding domain superfamily NIY05_16915 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_16925 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 NIY05_16925 IPR000794 Beta-ketoacyl synthase NIY05_16925 IPR018201 Beta-ketoacyl synthase, active site NIY05_16925 IPR014031 Beta-ketoacyl synthase, C-terminal NIY05_16925 IPR014030 Beta-ketoacyl synthase, N-terminal NIY05_16925 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain NIY05_16925 IPR016039 Thiolase-like NIY05_16935 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_16935 IPR006905 Flavin-dependent halogenase NIY05_16955 IPR022313 Phenylalanine/histidine ammonia-lyases, active site NIY05_16955 IPR008948 L-Aspartase-like NIY05_16955 IPR005921 Histidine ammonia-lyase NIY05_16955 IPR001106 Aromatic amino acid lyase NIY05_16955 IPR024083 Fumarase/histidase, N-terminal NIY05_16970 IPR025110 AMP-binding enzyme, C-terminal domain NIY05_16970 IPR020845 AMP-binding, conserved site NIY05_16970 IPR000873 AMP-dependent synthetase/ligase NIY05_16970 IPR042099 AMP-dependent synthetase-like superfamily NIY05_16980 IPR036736 ACP-like superfamily NIY05_16980 IPR003231 Acyl carrier protein (ACP) NIY05_16980 IPR009081 Phosphopantetheine binding ACP domain NIY05_16985 IPR009081 Phosphopantetheine binding ACP domain NIY05_16985 IPR006162 Phosphopantetheine attachment site NIY05_16985 IPR036736 ACP-like superfamily NIY05_16985 IPR003231 Acyl carrier protein (ACP) NIY05_17000 IPR031166 EngA-type guanine nucleotide-binding (G) domain NIY05_17000 IPR016484 GTP-binding protein EngA NIY05_17000 IPR006073 GTP binding domain NIY05_17000 IPR032859 GTPase Der, C-terminal KH-domain-like NIY05_17000 IPR015946 K homology domain-like, alpha/beta NIY05_17000 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_17000 IPR005225 Small GTP-binding protein domain NIY05_17005 IPR017687 Outer membrane protein assembly factor BamB NIY05_17005 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NIY05_17005 IPR002372 Pyrrolo-quinoline quinone repeat NIY05_17005 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NIY05_17005 IPR015943 WD40/YVTN repeat-like-containing domain superfamily NIY05_17015 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit NIY05_17015 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain NIY05_17015 IPR006195 Aminoacyl-tRNA synthetase, class II NIY05_17015 IPR036621 Anticodon-binding domain superfamily NIY05_17015 IPR004154 Anticodon-binding NIY05_17015 IPR015807 Histidine-tRNA ligase NIY05_17020 IPR011005 Dihydropteroate synthase-like NIY05_17020 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial NIY05_17020 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type NIY05_17025 IPR001387 Cro/C1-type helix-turn-helix domain NIY05_17025 IPR025194 Domain of unknown function DUF4115 NIY05_17025 IPR010982 Lambda repressor-like, DNA-binding domain superfamily NIY05_17030 IPR013026 Tetratricopeptide repeat-containing domain NIY05_17030 IPR013360 Pilus biogenesis/stability type IV, PilW NIY05_17030 IPR011990 Tetratricopeptide-like helical domain superfamily NIY05_17030 IPR019734 Tetratricopeptide repeat NIY05_17035 IPR007197 Radical SAM NIY05_17035 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr NIY05_17035 IPR013785 Aldolase-type TIM barrel NIY05_17035 IPR027492 Dual-specificity RNA methyltransferase RlmN NIY05_17035 IPR040072 Methyltransferase (Class A) NIY05_17040 IPR034907 Nucleoside diphosphate kinase-like domain NIY05_17040 IPR036850 Nucleoside diphosphate kinase-like domain superfamily NIY05_17040 IPR001564 Nucleoside diphosphate kinase NIY05_17040 IPR023005 Nucleoside diphosphate kinase, active site NIY05_17045 IPR007479 ISC system FeS cluster assembly, IscX NIY05_17045 IPR036762 IscX-like superfamily NIY05_17050 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily NIY05_17050 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIY05_17055 IPR001296 Glycosyl transferase, family 1 NIY05_17055 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NIY05_17060 IPR040573 Tail specific protease, N-terminal domain NIY05_17060 IPR020992 Tail specific protease, C-terminal NIY05_17060 IPR005151 Tail specific protease NIY05_17060 IPR001478 PDZ domain NIY05_17060 IPR036034 PDZ superfamily NIY05_17060 IPR029045 ClpP/crotonase-like domain superfamily NIY05_17060 IPR004447 C-terminal-processing peptidase S41A NIY05_17065 IPR022956 Beta-hexosaminidase, bacterial NIY05_17065 IPR019800 Glycoside hydrolase, family 3, active site NIY05_17065 IPR001764 Glycoside hydrolase, family 3, N-terminal NIY05_17065 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily NIY05_17065 IPR017853 Glycoside hydrolase superfamily NIY05_17075 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase NIY05_17075 IPR000073 Alpha/beta hydrolase fold-1 NIY05_17075 IPR029058 Alpha/Beta hydrolase fold NIY05_17075 IPR000639 Epoxide hydrolase-like NIY05_17080 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_17080 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_17080 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_17080 IPR015590 Aldehyde dehydrogenase domain NIY05_17080 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site NIY05_17080 IPR012134 Glutamate-5-semialdehyde dehydrogenase NIY05_17080 IPR000965 GPR domain NIY05_17085 IPR015590 Aldehyde dehydrogenase domain NIY05_17085 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_17085 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_17085 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_17085 IPR016160 Aldehyde dehydrogenase, cysteine active site NIY05_17090 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_17090 IPR031322 Shikimate kinase/gluconokinase NIY05_17090 IPR006001 Carbohydrate kinase, thermoresistant glucokinase NIY05_17095 IPR003474 Gluconate transporter NIY05_17100 IPR000887 KDPG/KHG aldolase NIY05_17100 IPR013785 Aldolase-type TIM barrel NIY05_17100 IPR031337 KDPG/KHG aldolase, active site 1 NIY05_17100 IPR031338 KDPG/KHG aldolase, active site 2 NIY05_17105 IPR037237 IlvD/EDD, N-terminal domain NIY05_17105 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site NIY05_17105 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase NIY05_17105 IPR004786 6-phosphogluconate dehydratase NIY05_17105 IPR042096 Dihydroxy-acid dehydratase, C-terminal NIY05_17110 IPR004372 Acetate/propionate kinase NIY05_17110 IPR000890 Aliphatic acid kinase, short-chain NIY05_17110 IPR023865 Aliphatic acid kinase, short-chain, conserved site NIY05_17115 IPR010766 DRTGG NIY05_17115 IPR016475 Phosphate acetyltransferase, bacteria NIY05_17115 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_17115 IPR004614 Phosphate acetyltransferase NIY05_17115 IPR042113 Phosphate acetyltransferase, domain 1 NIY05_17115 IPR042112 Phosphate acetyltransferase, domain 2 NIY05_17115 IPR002505 Phosphate acetyl/butaryl transferase NIY05_17115 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily NIY05_17120 IPR020557 Fumarate lyase, conserved site NIY05_17120 IPR011167 Iron-dependent fumarate hydratase NIY05_17120 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain NIY05_17120 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain NIY05_17120 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily NIY05_17135 IPR010603 Zinc finger, ClpX C4-type NIY05_17135 IPR038366 Zinc finger, ClpX C4-type superfamily NIY05_17135 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_17135 IPR003593 AAA+ ATPase domain NIY05_17135 IPR019489 Clp ATPase, C-terminal NIY05_17135 IPR003959 ATPase, AAA-type, core NIY05_17135 IPR004487 Clp protease, ATP-binding subunit ClpX NIY05_17140 IPR001907 ATP-dependent Clp protease proteolytic subunit NIY05_17140 IPR029045 ClpP/crotonase-like domain superfamily NIY05_17140 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA NIY05_17140 IPR033135 ClpP, histidine active site NIY05_17140 IPR018215 ClpP, Ser active site NIY05_17145 IPR027304 Trigger factor/SurA domain superfamily NIY05_17145 IPR036611 Trigger factor ribosome-binding domain superfamily NIY05_17145 IPR008880 Trigger factor, C-terminal NIY05_17145 IPR037041 Trigger factor, C-terminal domain superfamily NIY05_17145 IPR005215 Trigger factor NIY05_17145 IPR008881 Trigger factor, ribosome-binding, bacterial NIY05_17145 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain NIY05_17150 IPR030148 Catecholate siderophore receptor Fiu NIY05_17150 IPR012910 TonB-dependent receptor, plug domain NIY05_17150 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_17150 IPR039423 TonB-dependent receptor-like NIY05_17150 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_17150 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NIY05_17150 IPR010105 TonB-dependent siderophore receptor NIY05_17155 IPR006620 Prolyl 4-hydroxylase, alpha subunit NIY05_17155 IPR041097 PKHD-type hydroxylase C-terminal domain NIY05_17155 IPR005123 Oxoglutarate/iron-dependent dioxygenase NIY05_17155 IPR023550 PKHD-type hydroxylase NIY05_17160 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain NIY05_17160 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site NIY05_17160 IPR013785 Aldolase-type TIM barrel NIY05_17160 IPR005668 2-isopropylmalate synthase NIY05_17160 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily NIY05_17160 IPR039371 LeuA, N-terminal catalytic TIM barrel domain NIY05_17160 IPR000891 Pyruvate carboxyltransferase NIY05_17165 IPR029058 Alpha/Beta hydrolase fold NIY05_17165 IPR000073 Alpha/beta hydrolase fold-1 NIY05_17165 IPR008220 Homoserine/serine acetyltransferase MetX-like NIY05_17170 IPR010743 Methionine biosynthesis MetW NIY05_17170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_17170 IPR000073 Alpha/beta hydrolase fold-1 NIY05_17170 IPR008220 Homoserine/serine acetyltransferase MetX-like NIY05_17170 IPR029058 Alpha/Beta hydrolase fold NIY05_17180 IPR020922 dITP/XTP pyrophosphatase NIY05_17180 IPR002637 Ham1-like protein NIY05_17180 IPR029001 Inosine triphosphate pyrophosphatase-like NIY05_17190 IPR003369 Sec-independent protein translocase protein TatA/B/E NIY05_17190 IPR006312 Sec-independent protein translocase protein TatA/E NIY05_17195 IPR003369 Sec-independent protein translocase protein TatA/B/E NIY05_17195 IPR018448 Twin-arginine translocation protein TatB NIY05_17200 IPR019820 Sec-independent periplasmic protein translocase, conserved site NIY05_17200 IPR002033 Sec-independent periplasmic protein translocase TatC NIY05_17220 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt NIY05_17235 IPR020940 Thymidylate synthase, active site NIY05_17235 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily NIY05_17235 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain NIY05_17235 IPR000398 Thymidylate synthase NIY05_17240 IPR012259 Dihydrofolate reductase NIY05_17240 IPR024072 Dihydrofolate reductase-like domain superfamily NIY05_17240 IPR017925 Dihydrofolate reductase conserved site NIY05_17240 IPR001796 Dihydrofolate reductase domain NIY05_17250 IPR002569 Peptide methionine sulphoxide reductase MsrA NIY05_17250 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily NIY05_17260 IPR002898 MotA/TolQ/ExbB proton channel NIY05_17270 IPR004810 Formyltetrahydrofolate deformylase NIY05_17270 IPR002912 ACT domain NIY05_17270 IPR002376 Formyl transferase, N-terminal NIY05_17270 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain NIY05_17270 IPR036477 Formyl transferase, N-terminal domain superfamily NIY05_17280 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent NIY05_17280 IPR015590 Aldehyde dehydrogenase domain NIY05_17280 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_17280 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NIY05_17280 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_17280 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_17285 IPR001383 Ribosomal protein L28 NIY05_17285 IPR037147 Ribosomal protein L28/L24 superfamily NIY05_17285 IPR026569 Ribosomal protein L28/L24 NIY05_17285 IPR034704 L28p-like NIY05_17290 IPR038584 Ribosomal protein L33 superfamily NIY05_17290 IPR001705 Ribosomal protein L33 NIY05_17290 IPR018264 Ribosomal protein L33, conserved site NIY05_17290 IPR011332 Zinc-binding ribosomal protein NIY05_17295 IPR003148 Regulator of K+ conductance, N-terminal NIY05_17295 IPR036291 NAD(P)-binding domain superfamily NIY05_17295 IPR004771 K+/H+ exchanger NIY05_17295 IPR006153 Cation/H+ exchanger NIY05_17295 IPR038770 Sodium/solute symporter superfamily NIY05_17315 IPR035979 RNA-binding domain superfamily NIY05_17315 IPR000504 RNA recognition motif domain NIY05_17315 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily NIY05_17320 IPR005751 ATP-dependent DNA helicase PcrA NIY05_17320 IPR013986 DExx box DNA helicase domain superfamily NIY05_17320 IPR014017 UvrD-like DNA helicase, C-terminal NIY05_17320 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_17320 IPR014016 UvrD-like helicase, ATP-binding domain NIY05_17320 IPR034739 UvrD/AddA helicase, N-terminal NIY05_17320 IPR000212 DNA helicase, UvrD/REP type NIY05_17335 IPR028612 DNA topoisomerase I, type IA NIY05_17335 IPR034149 DNA topoisomerase 1, TOPRIM domain NIY05_17335 IPR006171 TOPRIM domain NIY05_17335 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type NIY05_17335 IPR005733 DNA topoisomerase I, bacterial-type NIY05_17335 IPR013498 DNA topoisomerase, type IA, zn finger NIY05_17335 IPR003602 DNA topoisomerase, type IA, DNA-binding domain NIY05_17335 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 NIY05_17335 IPR023405 DNA topoisomerase, type IA, core domain NIY05_17335 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 NIY05_17335 IPR013497 DNA topoisomerase, type IA, central NIY05_17335 IPR023406 DNA topoisomerase, type IA, active site NIY05_17335 IPR003601 DNA topoisomerase, type IA, domain 2 NIY05_17335 IPR000380 DNA topoisomerase, type IA NIY05_17335 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 NIY05_17345 IPR036390 Winged helix DNA-binding domain superfamily NIY05_17345 IPR002577 Helix-turn-helix, HxlR type NIY05_17345 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_17350 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site NIY05_17350 IPR011032 GroES-like superfamily NIY05_17350 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 NIY05_17350 IPR013154 Alcohol dehydrogenase, N-terminal NIY05_17350 IPR013149 Alcohol dehydrogenase, C-terminal NIY05_17350 IPR036291 NAD(P)-binding domain superfamily NIY05_17350 IPR020843 Polyketide synthase, enoylreductase domain NIY05_17355 IPR007236 SlyX NIY05_17360 IPR003439 ABC transporter-like NIY05_17360 IPR032524 ABC transporter Uup, C-terminal NIY05_17360 IPR003593 AAA+ ATPase domain NIY05_17360 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_17360 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily NIY05_17360 IPR017871 ABC transporter, conserved site NIY05_17360 IPR032781 ABC-transporter extension domain NIY05_17365 IPR004778 Homoserine/Threonine efflux protein NIY05_17365 IPR001123 Amino acid exporter protein, LeuE-type NIY05_17370 IPR011921 Lipid A biosynthesis myristoyltransferase NIY05_17370 IPR004960 Bacterial lipid A biosynthesis acyltransferase NIY05_17380 IPR033380 Glutamate-aspartate symport protein GltP/GltT NIY05_17380 IPR001991 Sodium:dicarboxylate symporter NIY05_17380 IPR018107 Sodium:dicarboxylate symporter, conserved site NIY05_17380 IPR036458 Sodium:dicarboxylate symporter superfamily NIY05_17380 IPR034703 Proton/glutamate-aspartate symporter GltP NIY05_17390 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type NIY05_17390 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site NIY05_17390 IPR012080 Aspartate-semialdehyde dehydrogenase NIY05_17390 IPR036291 NAD(P)-binding domain superfamily NIY05_17390 IPR000534 Semialdehyde dehydrogenase, NAD-binding NIY05_17390 IPR012280 Semialdehyde dehydrogenase, dimerisation domain NIY05_17410 IPR020103 Pseudouridine synthase, catalytic domain superfamily NIY05_17410 IPR001406 Pseudouridine synthase I, TruA NIY05_17410 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain NIY05_17410 IPR020095 Pseudouridine synthase I, TruA, C-terminal NIY05_17420 IPR004368 Translation initiation factor IF-1 NIY05_17420 IPR022967 RNA-binding domain, S1 NIY05_17420 IPR006196 RNA-binding domain, S1, IF1 type NIY05_17420 IPR012340 Nucleic acid-binding, OB-fold NIY05_17435 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site NIY05_17435 IPR024084 Isopropylmalate dehydrogenase-like domain NIY05_17435 IPR004429 Isopropylmalate dehydrogenase NIY05_17445 IPR004431 3-isopropylmalate dehydratase, small subunit NIY05_17445 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NIY05_17445 IPR033940 3-isopropylmalate dehydratase, swivel domain NIY05_17445 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain NIY05_17450 IPR033941 3-Isopropylmalate dehydratase, catalytic domain NIY05_17450 IPR036008 Aconitase, iron-sulfur domain NIY05_17450 IPR018136 Aconitase family, 4Fe-4S cluster binding site NIY05_17450 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain NIY05_17450 IPR004430 3-isopropylmalate dehydratase, large subunit NIY05_17450 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 NIY05_17460 IPR005119 LysR, substrate-binding NIY05_17460 IPR000847 Transcription regulator HTH, LysR NIY05_17460 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_17460 IPR036390 Winged helix DNA-binding domain superfamily NIY05_17480 IPR020476 NUDIX hydrolase NIY05_17480 IPR015797 NUDIX hydrolase-like domain superfamily NIY05_17480 IPR020084 NUDIX hydrolase, conserved site NIY05_17480 IPR000086 NUDIX hydrolase domain NIY05_17480 IPR022927 RNA pyrophosphohydrolase RppH NIY05_17485 IPR023151 PEP-utilising enzyme, conserved site NIY05_17485 IPR006318 Phosphotransferase system, enzyme I-like NIY05_17485 IPR036637 Phosphohistidine domain superfamily NIY05_17485 IPR000121 PEP-utilising enzyme, C-terminal NIY05_17485 IPR040442 Pyruvate kinase-like domain superfamily NIY05_17485 IPR008279 PEP-utilising enzyme, mobile domain NIY05_17485 IPR029016 GAF-like domain superfamily NIY05_17485 IPR003018 GAF domain NIY05_17485 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily NIY05_17485 IPR018274 PEP-utilising enzyme, active site NIY05_17485 IPR008731 Phosphotransferase system, enzyme I N-terminal NIY05_17485 IPR036618 PtsI, HPr-binding domain superfamily NIY05_17490 IPR000763 Catalase-peroxidase haem NIY05_17490 IPR002016 Haem peroxidase NIY05_17490 IPR010255 Haem peroxidase superfamily NIY05_17490 IPR019794 Peroxidase, active site NIY05_17495 IPR001279 Metallo-beta-lactamase NIY05_17495 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D NIY05_17495 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NIY05_17500 IPR005119 LysR, substrate-binding NIY05_17500 IPR000847 Transcription regulator HTH, LysR NIY05_17500 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_17500 IPR036390 Winged helix DNA-binding domain superfamily NIY05_17510 IPR004045 Glutathione S-transferase, N-terminal NIY05_17510 IPR010987 Glutathione S-transferase, C-terminal-like NIY05_17510 IPR036249 Thioredoxin-like superfamily NIY05_17510 IPR036282 Glutathione S-transferase, C-terminal domain superfamily NIY05_17510 IPR040079 Glutathione Transferase family NIY05_17515 IPR036390 Winged helix DNA-binding domain superfamily NIY05_17515 IPR001034 DeoR-type HTH domain NIY05_17515 IPR013196 Helix-turn-helix, type 11 NIY05_17515 IPR028349 Protein PafC NIY05_17515 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_17515 IPR026881 WYL domain NIY05_17520 IPR036412 HAD-like superfamily NIY05_17520 IPR006439 HAD hydrolase, subfamily IA NIY05_17520 IPR041492 Haloacid dehalogenase-like hydrolase NIY05_17520 IPR023214 HAD superfamily NIY05_17520 IPR023198 Phosphoglycolate phosphatase-like, domain 2 NIY05_17520 IPR023733 Pyrophosphatase PpaX NIY05_17525 IPR036986 RNA-binding S4 domain superfamily NIY05_17525 IPR002942 RNA-binding S4 domain NIY05_17525 IPR020103 Pseudouridine synthase, catalytic domain superfamily NIY05_17525 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site NIY05_17525 IPR006225 Pseudouridine synthase, RluC/RluD NIY05_17525 IPR006145 Pseudouridine synthase, RsuA/RluA NIY05_17530 IPR003029 S1 domain NIY05_17530 IPR022967 RNA-binding domain, S1 NIY05_17530 IPR004659 Ribonuclease E/G NIY05_17530 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G NIY05_17530 IPR021968 Polyribonucleotide phosphorylase C-terminal NIY05_17530 IPR028878 Ribonuclease E NIY05_17530 IPR012340 Nucleic acid-binding, OB-fold NIY05_17535 IPR025110 AMP-binding enzyme, C-terminal domain NIY05_17535 IPR020845 AMP-binding, conserved site NIY05_17535 IPR000873 AMP-dependent synthetase/ligase NIY05_17535 IPR042099 AMP-dependent synthetase-like superfamily NIY05_17535 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 NIY05_17550 IPR036390 Winged helix DNA-binding domain superfamily NIY05_17550 IPR005119 LysR, substrate-binding NIY05_17550 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_17550 IPR000847 Transcription regulator HTH, LysR NIY05_17555 IPR036291 NAD(P)-binding domain superfamily NIY05_17555 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_17560 IPR023404 Radical SAM, alpha/beta horseshoe NIY05_17560 IPR007197 Radical SAM NIY05_17560 IPR004559 Heme chaperone HemW-like NIY05_17560 IPR034505 Anaerobic coproporphyrinogen-III oxidase NIY05_17560 IPR006638 Elp3/MiaB/NifB NIY05_17560 IPR010723 HemN, C-terminal NIY05_17570 IPR002528 Multi antimicrobial extrusion protein NIY05_17575 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_17575 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_17575 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain NIY05_17575 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_17575 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_17575 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_17580 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain NIY05_17580 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_17580 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_17580 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_17580 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_17585 IPR011009 Protein kinase-like domain superfamily NIY05_17585 IPR000719 Protein kinase domain NIY05_17585 IPR004147 UbiB domain NIY05_17590 IPR002150 Ribosomal protein L31 NIY05_17590 IPR034704 L28p-like NIY05_17590 IPR042105 Ribosomal protein L31 superfamily NIY05_17590 IPR027493 Ribosomal protein L31 type B NIY05_17605 IPR003691 Putative fluoride ion transporter CrcB NIY05_17625 IPR013088 Zinc finger, NHR/GATA-type NIY05_17625 IPR005584 DNA gyrase inhibitor YacG NIY05_17630 IPR001279 Metallo-beta-lactamase NIY05_17630 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NIY05_17635 IPR001015 Ferrochelatase NIY05_17635 IPR019772 Ferrochelatase, active site NIY05_17635 IPR033644 Ferrochelatase, C-terminal NIY05_17635 IPR033659 Ferrochelatase, N-terminal NIY05_17645 IPR004391 Glutamate racemase NIY05_17645 IPR015942 Asp/Glu/hydantoin racemase NIY05_17645 IPR018187 Asp/Glu racemase, active site 1 NIY05_17645 IPR033134 Asp/Glu racemase, active site 2 NIY05_17645 IPR001920 Asp/Glu racemase NIY05_17655 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase NIY05_17655 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NIY05_17655 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_17660 IPR022931 Sulfur carrier protein TusA NIY05_17660 IPR001455 TusA-like domain NIY05_17660 IPR036868 TusA-like domain superfamily NIY05_17665 IPR000644 CBS domain NIY05_17665 IPR036318 FAD-binding, type PCMH-like superfamily NIY05_17665 IPR005170 Transporter-associated domain NIY05_17665 IPR016169 FAD-binding, type PCMH, subdomain 2 NIY05_17670 IPR004563 Apolipoprotein N-acyltransferase NIY05_17670 IPR003010 Carbon-nitrogen hydrolase NIY05_17670 IPR036526 Carbon-nitrogen hydrolase superfamily NIY05_17675 IPR008231 Probable chaperone CsaA NIY05_17675 IPR012340 Nucleic acid-binding, OB-fold NIY05_17675 IPR002547 tRNA-binding domain NIY05_17685 IPR000983 Bacterial general secretion pathway protein G-type pilin NIY05_17685 IPR013545 Type II secretion system protein G NIY05_17685 IPR010054 General secretion pathway protein G NIY05_17685 IPR012902 Prokaryotic N-terminal methylation site NIY05_17690 IPR011850 General secretion pathway protein F NIY05_17690 IPR001992 Type II secretion system conserved site NIY05_17690 IPR018076 Type II secretion system F domain NIY05_17690 IPR042094 Type II secretion system F domain superfamily NIY05_17690 IPR003004 GspF/PilC family NIY05_17695 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain NIY05_17695 IPR041236 Primosomal protein N, C-terminal domain NIY05_17695 IPR041222 Primosomal protein N', 3' DNA-binding domain NIY05_17695 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily NIY05_17695 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_17695 IPR001650 Helicase, C-terminal NIY05_17695 IPR014001 Helicase superfamily 1/2, ATP-binding domain NIY05_17695 IPR011545 DEAD/DEAH box helicase domain NIY05_17695 IPR005259 Primosomal protein N' NIY05_17700 IPR006153 Cation/H+ exchanger NIY05_17700 IPR004771 K+/H+ exchanger NIY05_17700 IPR020884 Glutathione-regulated potassium-efflux system protein KefB NIY05_17700 IPR038770 Sodium/solute symporter superfamily NIY05_17700 IPR036291 NAD(P)-binding domain superfamily NIY05_17700 IPR003148 Regulator of K+ conductance, N-terminal NIY05_17705 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily NIY05_17705 IPR016154 Heat shock protein Hsp33, C-terminal NIY05_17705 IPR000397 Heat shock protein Hsp33 NIY05_17705 IPR016153 Heat shock protein Hsp33, N-terminal NIY05_17715 IPR023859 DNA-binding protein, curved-DNA NIY05_17715 IPR002939 Chaperone DnaJ, C-terminal NIY05_17715 IPR001623 DnaJ domain NIY05_17715 IPR018253 DnaJ domain, conserved site NIY05_17715 IPR008971 HSP40/DnaJ peptide-binding NIY05_17715 IPR036869 Chaperone J-domain superfamily NIY05_17720 IPR022835 Chaperone modulatory protein CbpM NIY05_17725 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB NIY05_17725 IPR004488 Magnesium/cobalt transport protein CorA NIY05_17730 IPR001247 Exoribonuclease, phosphorolytic domain 1 NIY05_17730 IPR015847 Exoribonuclease, phosphorolytic domain 2 NIY05_17730 IPR036345 Exoribonuclease, PH domain 2 superfamily NIY05_17730 IPR004087 K Homology domain NIY05_17730 IPR004088 K Homology domain, type 1 NIY05_17730 IPR036612 K Homology domain, type 1 superfamily NIY05_17730 IPR012340 Nucleic acid-binding, OB-fold NIY05_17730 IPR012162 Polyribonucleotide nucleotidyltransferase NIY05_17730 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain NIY05_17730 IPR027408 PNPase/RNase PH domain superfamily NIY05_17730 IPR020568 Ribosomal protein S5 domain 2-type fold NIY05_17730 IPR022967 RNA-binding domain, S1 NIY05_17730 IPR003029 S1 domain NIY05_17730 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily NIY05_17735 IPR000589 Ribosomal protein S15 NIY05_17735 IPR005290 Ribosomal protein S15, bacterial-type NIY05_17735 IPR009068 S15/NS1, RNA-binding NIY05_17740 IPR012338 Beta-lactamase/transpeptidase-like NIY05_17740 IPR001466 Beta-lactamase-related NIY05_17745 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain NIY05_17745 IPR027785 UvrD-like helicase C-terminal domain NIY05_17745 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_17745 IPR003593 AAA+ ATPase domain NIY05_17745 IPR006344 RecBCD enzyme subunit RecD NIY05_17750 IPR014017 UvrD-like DNA helicase, C-terminal NIY05_17750 IPR000212 DNA helicase, UvrD/REP type NIY05_17750 IPR011604 Exonuclease, phage-type/RecB, C-terminal NIY05_17750 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_17750 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type NIY05_17750 IPR004586 RecBCD enzyme subunit RecB NIY05_17750 IPR011335 Restriction endonuclease type II-like NIY05_17750 IPR014016 UvrD-like helicase, ATP-binding domain NIY05_17750 IPR034739 UvrD/AddA helicase, N-terminal NIY05_17755 IPR011335 Restriction endonuclease type II-like NIY05_17755 IPR041500 RecC, C-terminal NIY05_17755 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_17755 IPR013986 DExx box DNA helicase domain superfamily NIY05_17755 IPR006697 RecBCD enzyme subunit RecC NIY05_17765 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_17765 IPR022488 Polyphosphate kinase-2-related NIY05_17775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_17775 IPR004033 UbiE/COQ5 methyltransferase NIY05_17775 IPR023576 UbiE/COQ5 methyltransferase, conserved site NIY05_17785 IPR011009 Protein kinase-like domain superfamily NIY05_17785 IPR010232 Probable protein kinase UbiB NIY05_17785 IPR004147 UbiB domain NIY05_17790 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_17790 IPR002938 FAD-binding domain NIY05_17795 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain NIY05_17795 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily NIY05_17795 IPR026660 Phosphoribosyl-AMP cyclohydrolase NIY05_17810 IPR005281 Monovalent cation:proton antiporter, subunit B NIY05_17810 IPR025383 Domain of unknown function DUF4040 NIY05_17810 IPR007182 Na+/H+ antiporter MnhB subunit-related protein NIY05_17810 IPR005663 Monovalent cation proton antiporter subunit A NIY05_17810 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit NIY05_17810 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal NIY05_17815 IPR006673 Mnh complex subunit C1 NIY05_17815 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like NIY05_17820 IPR004775 Na(+)/H(+) antiporter subunit D1 NIY05_17820 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit NIY05_17825 IPR002758 Na+/H+ antiporter subunit E NIY05_17830 IPR007208 Na(+)/H(+) antiporter subunit F-like NIY05_17835 IPR005133 Na+/H+ antiporter subunit G NIY05_17840 IPR000238 Ribosome-binding factor A NIY05_17840 IPR023799 Ribosome-binding factor A domain superfamily NIY05_17840 IPR015946 K homology domain-like, alpha/beta NIY05_17845 IPR009000 Translation protein, beta-barrel domain superfamily NIY05_17845 IPR036925 Translation initiation factor IF-2, domain 3 superfamily NIY05_17845 IPR023115 Translation initiation factor IF- 2, domain 3 NIY05_17845 IPR000178 Translation initiation factor aIF-2, bacterial-like NIY05_17845 IPR015760 Translation initiation factor IF- 2 NIY05_17845 IPR005225 Small GTP-binding protein domain NIY05_17845 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_17845 IPR006847 Translation initiation factor IF-2, N-terminal NIY05_17845 IPR013575 Initiation factor 2 associated domain, bacterial NIY05_17845 IPR009061 Putative DNA-binding domain superfamily NIY05_17845 IPR000795 Transcription factor, GTP-binding domain NIY05_17850 IPR003029 S1 domain NIY05_17850 IPR010213 Transcription termination factor NusA NIY05_17850 IPR010214 Transcription termination factor NusA, C-terminal duplication NIY05_17850 IPR013735 Transcription factor NusA, N-terminal NIY05_17850 IPR022967 RNA-binding domain, S1 NIY05_17850 IPR025249 KH domain, NusA-like NIY05_17850 IPR030842 Transcription termination/antitermination protein NusA, bacterial NIY05_17850 IPR012340 Nucleic acid-binding, OB-fold NIY05_17850 IPR009019 K homology domain superfamily, prokaryotic type NIY05_17850 IPR015946 K homology domain-like, alpha/beta NIY05_17850 IPR036555 NusA, N-terminal domain superfamily NIY05_17850 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical NIY05_17855 IPR003728 Ribosome maturation factor RimP NIY05_17855 IPR028998 Ribosome maturation factor RimP, C-terminal NIY05_17855 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily NIY05_17855 IPR028989 Ribosome maturation factor RimP, N-terminal NIY05_17855 IPR035956 RimP, N-terminal domain superfamily NIY05_17875 IPR004692 Preprotein translocase SecG subunit NIY05_17880 IPR035990 Triosephosphate isomerase superfamily NIY05_17880 IPR020861 Triosephosphate isomerase, active site NIY05_17880 IPR013785 Aldolase-type TIM barrel NIY05_17880 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic NIY05_17880 IPR000652 Triosephosphate isomerase NIY05_17885 IPR013374 ATPase, type IV, pilus assembly, PilB NIY05_17885 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_17885 IPR001482 Type II/IV secretion system protein NIY05_17885 IPR037257 General secretory system II, protein E, N-terminal superfamily NIY05_17885 IPR007831 General secretory system II, protein E, N-terminal NIY05_17885 IPR042181 Type II secretion system, protein E, N-terminal NIY05_17890 IPR003004 GspF/PilC family NIY05_17890 IPR001992 Type II secretion system conserved site NIY05_17890 IPR018076 Type II secretion system F domain NIY05_17890 IPR042094 Type II secretion system F domain superfamily NIY05_17900 IPR010627 Peptidase A24A, N-terminal NIY05_17900 IPR014032 Peptidase A24A, prepilin type IV, bacterial NIY05_17900 IPR000045 Prepilin type IV endopeptidase, peptidase domain NIY05_17905 IPR001977 Dephospho-CoA kinase NIY05_17905 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_17915 IPR029028 Alpha/beta knot methyltransferases NIY05_17915 IPR029064 50S ribosomal protein L30e-like NIY05_17915 IPR004441 RNA methyltransferase TrmH family NIY05_17915 IPR001537 tRNA/rRNA methyltransferase, SpoU type NIY05_17915 IPR013123 RNA 2-O ribose methyltransferase, substrate binding NIY05_17915 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NIY05_17915 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB NIY05_17920 IPR009664 Pyrimidine/purine nucleoside phosphorylase NIY05_17920 IPR014710 RmlC-like jelly roll fold NIY05_17920 IPR011051 RmlC-like cupin domain superfamily NIY05_17930 IPR004604 DNA recombination/repair protein RecN NIY05_17930 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_17930 IPR003395 RecF/RecN/SMC, N-terminal NIY05_17935 IPR003774 Protein of unknown function UPF0301 NIY05_17940 IPR006641 YqgF/RNase H-like domain NIY05_17940 IPR012337 Ribonuclease H-like superfamily NIY05_17940 IPR037027 YqgF/RNase H-like domain superfamily NIY05_17940 IPR005227 Putative pre-16S rRNA nuclease NIY05_17945 IPR039562 Membrane fusion protein, biotin-lipoyl like domain NIY05_17945 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA NIY05_17945 IPR006143 RND efflux pump, membrane fusion protein NIY05_17970 IPR035451 Ada-like domain superfamily NIY05_17970 IPR004026 Ada DNA repair, metal-binding NIY05_17970 IPR016221 Bifunctional regulatory protein Ada NIY05_17970 IPR009057 Homeobox-like domain superfamily NIY05_17970 IPR018060 DNA binding HTH domain, AraC-type NIY05_17970 IPR018062 HTH domain AraC-type, conserved site NIY05_17970 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site NIY05_17970 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding NIY05_17970 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain NIY05_17970 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain NIY05_17970 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_17970 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily NIY05_17975 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial NIY05_17975 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase NIY05_17975 IPR000462 CDP-alcohol phosphatidyltransferase NIY05_17985 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 NIY05_17985 IPR000305 GIY-YIG endonuclease NIY05_17985 IPR010994 RuvA domain 2-like NIY05_17985 IPR038476 UvrC homology region 2 superfamily NIY05_17985 IPR001162 UvrC family homology region NIY05_17985 IPR036876 UVR domain superfamily NIY05_17985 IPR035901 GIY-YIG endonuclease superfamily NIY05_17985 IPR004791 UvrABC system, subunit C NIY05_17985 IPR001943 UVR domain NIY05_18005 IPR012799 Fatty oxidation complex, alpha subunit FadB NIY05_18005 IPR036291 NAD(P)-binding domain superfamily NIY05_18005 IPR001753 Enoyl-CoA hydratase/isomerase NIY05_18005 IPR029045 ClpP/crotonase-like domain superfamily NIY05_18005 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NIY05_18005 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal NIY05_18005 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding NIY05_18005 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site NIY05_18005 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site NIY05_18010 IPR012805 Acetyl-CoA C-acyltransferase FadA NIY05_18010 IPR002155 Thiolase NIY05_18010 IPR016039 Thiolase-like NIY05_18010 IPR020615 Thiolase, acyl-enzyme intermediate active site NIY05_18010 IPR020610 Thiolase, active site NIY05_18010 IPR020617 Thiolase, C-terminal NIY05_18010 IPR020613 Thiolase, conserved site NIY05_18010 IPR020616 Thiolase, N-terminal NIY05_18030 IPR015358 Transcription regulator MerR, DNA binding NIY05_18030 IPR000551 MerR-type HTH domain NIY05_18030 IPR009061 Putative DNA-binding domain superfamily NIY05_18030 IPR011789 Cu(I)-responsive transcriptional regulator NIY05_18040 IPR001853 DSBA-like thioredoxin domain NIY05_18040 IPR036249 Thioredoxin-like superfamily NIY05_18055 IPR020575 Heat shock protein Hsp90, N-terminal NIY05_18055 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_18055 IPR020568 Ribosomal protein S5 domain 2-type fold NIY05_18055 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_18055 IPR037196 HSP90, C-terminal domain NIY05_18055 IPR001404 Heat shock protein Hsp90 family NIY05_18070 IPR032813 Putative Na+/H+ antiporter, N-terminal NIY05_18070 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal NIY05_18075 IPR029058 Alpha/Beta hydrolase fold NIY05_18075 IPR000073 Alpha/beta hydrolase fold-1 NIY05_18075 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase NIY05_18095 IPR038120 RNA polymerase Rpb1, funnel domain superfamily NIY05_18095 IPR042102 RNA polymerase Rpb1, domain 3 superfamily NIY05_18095 IPR007083 RNA polymerase Rpb1, domain 4 NIY05_18095 IPR007066 RNA polymerase Rpb1, domain 3 NIY05_18095 IPR007080 RNA polymerase Rpb1, domain 1 NIY05_18095 IPR006592 RNA polymerase, N-terminal NIY05_18095 IPR012754 DNA-directed RNA polymerase, subunit beta-prime NIY05_18095 IPR007081 RNA polymerase Rpb1, domain 5 NIY05_18095 IPR000722 RNA polymerase, alpha subunit NIY05_18100 IPR007121 RNA polymerase, beta subunit, conserved site NIY05_18100 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily NIY05_18100 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain NIY05_18100 IPR015712 DNA-directed RNA polymerase, subunit 2 NIY05_18100 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain NIY05_18100 IPR014724 RNA polymerase Rpb2, OB-fold NIY05_18100 IPR007641 RNA polymerase Rpb2, domain 7 NIY05_18100 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily NIY05_18100 IPR037034 RNA polymerase Rpb2, domain 2 superfamily NIY05_18100 IPR007642 RNA polymerase Rpb2, domain 2 NIY05_18100 IPR007644 RNA polymerase, beta subunit, protrusion NIY05_18100 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type NIY05_18100 IPR007645 RNA polymerase Rpb2, domain 3 NIY05_18105 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily NIY05_18105 IPR008932 Ribosomal protein L7/L12, oligomerisation NIY05_18105 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NIY05_18105 IPR000206 Ribosomal protein L7/L12 NIY05_18105 IPR013823 Ribosomal protein L7/L12, C-terminal NIY05_18110 IPR022973 Ribosomal protein L10 NIY05_18110 IPR002363 Ribosomal protein L10, eubacterial, conserved site NIY05_18110 IPR001790 Ribosomal protein L10P NIY05_18115 IPR005878 Ribosomal protein L1, bacterial-type NIY05_18115 IPR002143 Ribosomal protein L1 NIY05_18115 IPR023674 Ribosomal protein L1-like NIY05_18115 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein NIY05_18115 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich NIY05_18115 IPR023673 Ribosomal protein L1, conserved site NIY05_18120 IPR020784 Ribosomal protein L11, N-terminal NIY05_18120 IPR000911 Ribosomal protein L11/L12 NIY05_18120 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily NIY05_18120 IPR006519 Ribosomal protein L11, bacterial-type NIY05_18120 IPR020783 Ribosomal protein L11, C-terminal NIY05_18120 IPR020785 Ribosomal protein L11, conserved site NIY05_18120 IPR036769 Ribosomal protein L11, C-terminal domain superfamily NIY05_18125 IPR008991 Translation protein SH3-like domain superfamily NIY05_18125 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site NIY05_18125 IPR001062 Transcription antitermination protein, NusG NIY05_18125 IPR014722 Ribosomal protein L2, domain 2 NIY05_18125 IPR036735 NusG, N-terminal domain superfamily NIY05_18125 IPR006645 NusG, N-terminal NIY05_18125 IPR005824 KOW NIY05_18130 IPR038379 SecE superfamily NIY05_18130 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit NIY05_18130 IPR005807 SecE subunit of protein translocation complex, bacterial-like NIY05_18140 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NIY05_18140 IPR009000 Translation protein, beta-barrel domain superfamily NIY05_18140 IPR000795 Transcription factor, GTP-binding domain NIY05_18140 IPR005225 Small GTP-binding protein domain NIY05_18140 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_18140 IPR031157 Tr-type G domain, conserved site NIY05_18140 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle NIY05_18140 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal NIY05_18140 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain NIY05_18140 IPR004161 Translation elongation factor EFTu-like, domain 2 NIY05_18140 IPR033720 Elongation factor Tu, domain 2 NIY05_18165 IPR015890 Chorismate-utilising enzyme, C-terminal NIY05_18165 IPR005256 Anthranilate synthase component I, PabB-like NIY05_18165 IPR006805 Anthranilate synthase component I, N-terminal NIY05_18165 IPR005801 ADC synthase NIY05_18165 IPR019999 Anthranilate synthase component I-like NIY05_18170 IPR006439 HAD hydrolase, subfamily IA NIY05_18170 IPR037512 Phosphoglycolate phosphatase, prokaryotic NIY05_18170 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic NIY05_18170 IPR023198 Phosphoglycolate phosphatase-like, domain 2 NIY05_18170 IPR023214 HAD superfamily NIY05_18170 IPR041492 Haloacid dehalogenase-like hydrolase NIY05_18170 IPR036412 HAD-like superfamily NIY05_18175 IPR042287 FhaA, N-terminal NIY05_18175 IPR008984 SMAD/FHA domain superfamily NIY05_18175 IPR022128 Domain of unknown function DUF3662 NIY05_18175 IPR000253 Forkhead-associated (FHA) domain NIY05_18180 IPR001775 GspD/PilQ family NIY05_18180 IPR005644 NolW-like NIY05_18180 IPR013356 Type II secretion system GspD NIY05_18180 IPR004845 Type II secretion system GspD, conserved site NIY05_18180 IPR038591 NolW-like superfamily NIY05_18180 IPR004846 Type II/III secretion system NIY05_18195 IPR001801 Histone-like protein H-NS NIY05_18195 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily NIY05_18195 IPR027444 Histone-like protein H-NS, C-terminal domain NIY05_18220 IPR022418 Porphobilinogen deaminase, C-terminal NIY05_18220 IPR022417 Porphobilinogen deaminase, N-terminal NIY05_18220 IPR000860 Porphobilinogen deaminase NIY05_18220 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily NIY05_18220 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site NIY05_18225 IPR011006 CheY-like superfamily NIY05_18225 IPR007492 LytTR DNA-binding domain NIY05_18225 IPR001789 Signal transduction response regulator, receiver domain NIY05_18230 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_18230 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_18230 IPR029016 GAF-like domain superfamily NIY05_18230 IPR010559 Signal transduction histidine kinase, internal region NIY05_18230 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region NIY05_18235 IPR024083 Fumarase/histidase, N-terminal NIY05_18235 IPR009049 Argininosuccinate lyase NIY05_18235 IPR020557 Fumarate lyase, conserved site NIY05_18235 IPR008948 L-Aspartase-like NIY05_18235 IPR022761 Fumarate lyase, N-terminal NIY05_18235 IPR000362 Fumarate lyase family NIY05_18235 IPR029419 Argininosuccinate lyase, C-terminal NIY05_18240 IPR007457 Fe(II) trafficking protein YggX NIY05_18240 IPR036766 Fe(II) trafficking protein YggX superfamily NIY05_18245 IPR028366 Phosphate transport system protein PhoU NIY05_18245 IPR038078 PhoU-like domain superfamily NIY05_18245 IPR026022 PhoU domain NIY05_18250 IPR003423 Outer membrane efflux protein NIY05_18250 IPR010130 Type I secretion outer membrane protein, TolC NIY05_18255 IPR000620 EamA domain NIY05_18255 IPR004779 Carboxylate/Amino Acid/Amine Transporter NIY05_18270 IPR025747 ThiC-associated domain NIY05_18270 IPR038521 ThiC/Bza superfamily NIY05_18270 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B NIY05_18270 IPR037509 Phosphomethylpyrimidine synthase NIY05_18275 IPR004385 Nucleoside diphosphate pyrophosphatase NIY05_18275 IPR015797 NUDIX hydrolase-like domain superfamily NIY05_18275 IPR000086 NUDIX hydrolase domain NIY05_18280 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA NIY05_18280 IPR029052 Metallo-dependent phosphatase-like NIY05_18280 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type NIY05_18285 IPR012784 RNA polymerase-binding transcription factor DksA NIY05_18285 IPR037187 DksA, N-terminal domain superfamily NIY05_18285 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria NIY05_18285 IPR000962 Zinc finger, DksA/TraR C4-type NIY05_18285 IPR020458 Zinc finger, DksA/TraR C4-type conserved site NIY05_18290 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_18290 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain NIY05_18290 IPR022380 Glutamyl-Q tRNA(Asp) synthetase NIY05_18290 IPR000924 Glutamyl/glutaminyl-tRNA synthetase NIY05_18295 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site NIY05_18295 IPR013437 Probable peptidoglycan glycosyltransferase FtsW NIY05_18295 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA NIY05_18300 IPR004101 Mur ligase, C-terminal NIY05_18300 IPR036615 Mur ligase, C-terminal domain superfamily NIY05_18300 IPR013221 Mur ligase, central NIY05_18300 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase NIY05_18300 IPR036565 Mur-like, catalytic domain superfamily NIY05_18310 IPR003373 Ferrous iron transport protein B NIY05_18310 IPR011640 Ferrous iron transport protein B, C-terminal NIY05_18310 IPR030389 FeoB-type guanine nucleotide-binding (G) domain NIY05_18310 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain NIY05_18310 IPR006073 GTP binding domain NIY05_18310 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_18320 IPR013762 Integrase-like, catalytic domain superfamily NIY05_18320 IPR002104 Integrase, catalytic domain NIY05_18320 IPR010998 Integrase/recombinase, N-terminal NIY05_18320 IPR004107 Integrase, SAM-like, N-terminal NIY05_18320 IPR011932 Tyrosine recombinase XerD NIY05_18320 IPR023009 Tyrosine recombinase XerC/XerD NIY05_18320 IPR011010 DNA breaking-rejoining enzyme, catalytic core NIY05_18325 IPR033954 Disulphide bond isomerase, DsbC/G NIY05_18325 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal NIY05_18325 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily NIY05_18325 IPR012336 Thioredoxin-like fold NIY05_18325 IPR036249 Thioredoxin-like superfamily NIY05_18325 IPR017937 Thioredoxin, conserved site NIY05_18325 IPR013766 Thioredoxin domain NIY05_18330 IPR036291 NAD(P)-binding domain superfamily NIY05_18330 IPR001342 Homoserine dehydrogenase, catalytic NIY05_18330 IPR019811 Homoserine dehydrogenase, conserved site NIY05_18330 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding NIY05_18330 IPR016204 Homoserine dehydrogenase NIY05_18330 IPR002912 ACT domain NIY05_18335 IPR001926 Pyridoxal-phosphate dependent enzyme NIY05_18335 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site NIY05_18335 IPR004450 Threonine synthase-like NIY05_18335 IPR026260 Threonine synthase, bacterial/archaeal NIY05_18335 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIY05_18340 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A NIY05_18340 IPR012338 Beta-lactamase/transpeptidase-like NIY05_18340 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal NIY05_18345 IPR011006 CheY-like superfamily NIY05_18345 IPR016032 Signal transduction response regulator, C-terminal effector NIY05_18345 IPR001789 Signal transduction response regulator, receiver domain NIY05_18345 IPR000792 Transcription regulator LuxR, C-terminal NIY05_18350 IPR000014 PAS domain NIY05_18350 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NIY05_18350 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NIY05_18350 IPR005467 Histidine kinase domain NIY05_18350 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NIY05_18350 IPR003594 Histidine kinase/HSP90-like ATPase NIY05_18350 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NIY05_18355 IPR025944 Sigma-54 interaction domain, conserved site NIY05_18355 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NIY05_18355 IPR002078 RNA polymerase sigma factor 54 interaction domain NIY05_18355 IPR001789 Signal transduction response regulator, receiver domain NIY05_18355 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NIY05_18355 IPR002197 DNA binding HTH domain, Fis-type NIY05_18355 IPR009057 Homeobox-like domain superfamily NIY05_18355 IPR011006 CheY-like superfamily NIY05_18355 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_18355 IPR003593 AAA+ ATPase domain NIY05_18360 IPR029045 ClpP/crotonase-like domain superfamily NIY05_18360 IPR001478 PDZ domain NIY05_18360 IPR036034 PDZ superfamily NIY05_18360 IPR004447 C-terminal-processing peptidase S41A NIY05_18360 IPR005151 Tail specific protease NIY05_18365 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent NIY05_18365 IPR006124 Metalloenzyme NIY05_18365 IPR011258 BPG-independent PGAM, N-terminal NIY05_18365 IPR017850 Alkaline-phosphatase-like, core domain superfamily NIY05_18365 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily NIY05_18370 IPR030923 LPS export ABC transporter permease LptG NIY05_18370 IPR005495 Permease LptG/LptF-related NIY05_18380 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal NIY05_18380 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B NIY05_18380 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal NIY05_18380 IPR023042 Peptidase M17, leucine aminopeptidase NIY05_18400 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily NIY05_18400 IPR001783 Lumazine-binding protein NIY05_18400 IPR017938 Riboflavin synthase-like beta-barrel NIY05_18400 IPR026017 Lumazine-binding domain NIY05_18410 IPR002125 Cytidine and deoxycytidylate deaminase domain NIY05_18410 IPR016193 Cytidine deaminase-like NIY05_18410 IPR024072 Dihydrofolate reductase-like domain superfamily NIY05_18410 IPR004794 Riboflavin biosynthesis protein RibD NIY05_18410 IPR011549 Riboflavin-specific deaminase, C-terminal NIY05_18410 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal NIY05_18410 IPR016192 APOBEC/CMP deaminase, zinc-binding NIY05_18415 IPR003796 Ribonucleotide reductase regulator NrdR-like NIY05_18415 IPR005144 ATP-cone domain NIY05_18420 IPR001905 Ammonium transporter NIY05_18420 IPR018047 Ammonium transporter, conserved site NIY05_18420 IPR024041 Ammonium transporter AmtB-like domain NIY05_18420 IPR029020 Ammonium/urea transporter NIY05_18425 IPR002187 Nitrogen regulatory protein PII NIY05_18425 IPR011322 Nitrogen regulatory PII-like, alpha/beta NIY05_18425 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal NIY05_18425 IPR017918 Nitrogen regulatory protein PII, conserved site NIY05_18425 IPR002332 Nitrogen regulatory protein P-II, urydylation site NIY05_18445 IPR002575 Aminoglycoside phosphotransferase NIY05_18445 IPR024165 Aminoglycoside 3-phosphotransferase NIY05_18445 IPR011009 Protein kinase-like domain superfamily NIY05_18450 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase NIY05_18450 IPR011009 Protein kinase-like domain superfamily NIY05_18470 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NIY05_18470 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NIY05_18470 IPR009057 Homeobox-like domain superfamily NIY05_18470 IPR001647 DNA-binding HTH domain, TetR-type NIY05_18470 IPR004111 Tetracycline repressor TetR, C-terminal NIY05_18470 IPR003012 Tetracycline transcriptional regulator, TetR NIY05_18475 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG NIY05_18475 IPR005829 Sugar transporter, conserved site NIY05_18475 IPR036259 MFS transporter superfamily NIY05_18475 IPR020846 Major facilitator superfamily domain NIY05_18475 IPR011701 Major facilitator superfamily NIY05_18485 IPR002645 STAS domain NIY05_18485 IPR011547 SLC26A/SulP transporter domain NIY05_18485 IPR001902 SLC26A/SulP transporter NIY05_18485 IPR036513 STAS domain superfamily NIY05_18485 IPR018045 Sulphate anion transporter, conserved site NIY05_18490 IPR006015 Universal stress protein A family NIY05_18490 IPR006016 UspA NIY05_18510 IPR036397 Ribonuclease H superfamily NIY05_18510 IPR001584 Integrase, catalytic core NIY05_18510 IPR012337 Ribonuclease H-like superfamily NIY05_18525 IPR004839 Aminotransferase, class I/classII NIY05_18525 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_18525 IPR000524 Transcription regulator HTH, GntR NIY05_18525 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_18525 IPR036390 Winged helix DNA-binding domain superfamily NIY05_18525 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_18535 IPR020624 Schiff base-forming aldolase, conserved site NIY05_18535 IPR013785 Aldolase-type TIM barrel NIY05_18535 IPR002220 DapA-like NIY05_18535 IPR020625 Schiff base-forming aldolase, active site NIY05_18535 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA NIY05_18550 IPR005318 Outer membrane porin, bacterial NIY05_18550 IPR023614 Porin domain superfamily NIY05_18555 IPR008162 Inorganic pyrophosphatase NIY05_18555 IPR036649 Inorganic pyrophosphatase superfamily NIY05_18570 IPR025110 AMP-binding enzyme, C-terminal domain NIY05_18570 IPR020845 AMP-binding, conserved site NIY05_18570 IPR000873 AMP-dependent synthetase/ligase NIY05_18570 IPR042099 AMP-dependent synthetase-like superfamily NIY05_18575 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative NIY05_18575 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta NIY05_18575 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily NIY05_18575 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal NIY05_18575 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat NIY05_18575 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal NIY05_18575 IPR013760 DNA topoisomerase, type IIA-like domain superfamily NIY05_18580 IPR011701 Major facilitator superfamily NIY05_18580 IPR020846 Major facilitator superfamily domain NIY05_18580 IPR036259 MFS transporter superfamily NIY05_18580 IPR005829 Sugar transporter, conserved site NIY05_18585 IPR005115 Uncharacterised domain UPF0126 NIY05_18590 IPR032710 NTF2-like domain superfamily NIY05_18590 IPR004027 SEC-C motif NIY05_18590 IPR023006 Uncharacterised protein family UPF0225 NIY05_18595 IPR000644 CBS domain NIY05_18595 IPR036318 FAD-binding, type PCMH-like superfamily NIY05_18595 IPR016169 FAD-binding, type PCMH, subdomain 2 NIY05_18595 IPR005496 Integral membrane protein TerC NIY05_18595 IPR005170 Transporter-associated domain NIY05_18600 IPR031100 LOG family NIY05_18600 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG NIY05_18605 IPR036259 MFS transporter superfamily NIY05_18605 IPR011701 Major facilitator superfamily NIY05_18605 IPR020846 Major facilitator superfamily domain NIY05_18605 IPR023721 Multidrug resistance protein MdtD NIY05_18615 IPR017961 DNA polymerase, Y-family, little finger domain NIY05_18615 IPR022880 DNA polymerase IV NIY05_18615 IPR024728 DNA polymerase type-Y, HhH motif NIY05_18615 IPR001126 UmuC domain NIY05_18615 IPR036775 DNA polymerase, Y-family, little finger domain superfamily NIY05_18635 IPR023404 Radical SAM, alpha/beta horseshoe NIY05_18635 IPR022946 Uncharacterised protein family UPF0313 NIY05_18635 IPR024560 Uncharacterised protein family UPF0313, C-terminal NIY05_18635 IPR013704 Uncharacterised protein family UPF0313, N-terminal NIY05_18635 IPR006638 Elp3/MiaB/NifB NIY05_18635 IPR020612 Methylthiotransferase, conserved site NIY05_18635 IPR007197 Radical SAM NIY05_18655 IPR008254 Flavodoxin/nitric oxide synthase NIY05_18655 IPR029039 Flavoprotein-like superfamily NIY05_18655 IPR010089 Flavoprotein WrbA-like NIY05_18655 IPR005025 NADPH-dependent FMN reductase-like NIY05_18655 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic NIY05_18665 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NIY05_18665 IPR005856 Cysteine synthase NIY05_18665 IPR005859 Cysteine synthase CysK NIY05_18665 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site NIY05_18665 IPR001926 Pyridoxal-phosphate dependent enzyme NIY05_18725 IPR023635 Peptide deformylase NIY05_18725 IPR036821 Peptide deformylase superfamily NIY05_18735 IPR003488 DNA recombination-mediator protein A NIY05_18735 IPR041614 DprA, winged helix domain NIY05_18735 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_18740 IPR006070 YrdC-like domain NIY05_18740 IPR023535 Threonylcarbamoyl-AMP synthase NIY05_18740 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily NIY05_18745 IPR000620 EamA domain NIY05_18750 IPR001647 DNA-binding HTH domain, TetR-type NIY05_18750 IPR009057 Homeobox-like domain superfamily NIY05_18750 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NIY05_18755 IPR020846 Major facilitator superfamily domain NIY05_18755 IPR036259 MFS transporter superfamily NIY05_18755 IPR011701 Major facilitator superfamily NIY05_18765 IPR033674 Thioredoxin/glutathione peroxidase BtuE NIY05_18765 IPR000889 Glutathione peroxidase NIY05_18765 IPR029759 Glutathione peroxidase active site NIY05_18765 IPR029760 Glutathione peroxidase conserved site NIY05_18765 IPR036249 Thioredoxin-like superfamily NIY05_18775 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily NIY05_18775 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit NIY05_18775 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal NIY05_18775 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal NIY05_18780 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily NIY05_18780 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain NIY05_18780 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site NIY05_18780 IPR005722 ATP synthase, F1 complex, beta subunit NIY05_18780 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain NIY05_18780 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_18780 IPR003593 AAA+ ATPase domain NIY05_18780 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal NIY05_18785 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily NIY05_18785 IPR000131 ATP synthase, F1 complex, gamma subunit NIY05_18785 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site NIY05_18790 IPR000793 ATP synthase, alpha subunit, C-terminal NIY05_18790 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily NIY05_18790 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_18790 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain NIY05_18790 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily NIY05_18790 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily NIY05_18790 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site NIY05_18790 IPR005294 ATP synthase, F1 complex, alpha subunit NIY05_18790 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain NIY05_18790 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain NIY05_18795 IPR020781 ATPase, OSCP/delta subunit, conserved site NIY05_18795 IPR000711 ATPase, OSCP/delta subunit NIY05_18795 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily NIY05_18800 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily NIY05_18800 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast NIY05_18800 IPR005864 ATP synthase, F0 complex, subunit b, bacterial NIY05_18805 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast NIY05_18805 IPR035921 F/V-ATP synthase subunit C superfamily NIY05_18805 IPR038662 F1F0 ATP synthase subunit C superfamily NIY05_18805 IPR002379 V-ATPase proteolipid subunit C-like domain NIY05_18805 IPR000454 ATP synthase, F0 complex, subunit C NIY05_18805 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site NIY05_18810 IPR000568 ATP synthase, F0 complex, subunit A NIY05_18810 IPR023011 ATP synthase, F0 complex, subunit A, active site NIY05_18810 IPR035908 ATP synthase, F0 complex, subunit A superfamily NIY05_18830 IPR003593 AAA+ ATPase domain NIY05_18830 IPR003439 ABC transporter-like NIY05_18830 IPR017871 ABC transporter, conserved site NIY05_18830 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_18830 IPR017882 Zinc import ATP-binding protein ZnuC NIY05_18835 IPR037294 ABC transporter, BtuC-like NIY05_18835 IPR001626 ABC transporter, TroCD-like NIY05_18840 IPR004778 Homoserine/Threonine efflux protein NIY05_18840 IPR001123 Amino acid exporter protein, LeuE-type NIY05_18845 IPR006314 Dyp-type peroxidase NIY05_18845 IPR011008 Dimeric alpha-beta barrel NIY05_18855 IPR023667 NAD-dependent malic enzyme, proteobacteria NIY05_18855 IPR015884 Malic enzyme, conserved site NIY05_18855 IPR012301 Malic enzyme, N-terminal domain NIY05_18855 IPR037062 Malic enzyme, N-terminal domain superfamily NIY05_18855 IPR012302 Malic enzyme, NAD-binding NIY05_18855 IPR001891 Malic oxidoreductase NIY05_18855 IPR036291 NAD(P)-binding domain superfamily NIY05_18860 IPR035684 Arginyl-tRNA synthetase, catalytic core domain NIY05_18860 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily NIY05_18860 IPR008909 DALR anticodon binding NIY05_18860 IPR001278 Arginine-tRNA ligase NIY05_18860 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding NIY05_18860 IPR005148 Arginyl tRNA synthetase N-terminal domain NIY05_18880 IPR008778 Pirin, C-terminal domain NIY05_18880 IPR012093 Pirin NIY05_18880 IPR014710 RmlC-like jelly roll fold NIY05_18880 IPR011051 RmlC-like cupin domain superfamily NIY05_18880 IPR003829 Pirin, N-terminal domain NIY05_18890 IPR005149 Transcription regulator PadR, N-terminal NIY05_18890 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_18890 IPR036390 Winged helix DNA-binding domain superfamily NIY05_18895 IPR002934 Polymerase, nucleotidyl transferase domain NIY05_18895 IPR024172 Streptomycin 3''-adenylyltransferase NIY05_18895 IPR025184 Domain of unknown function DUF4111 NIY05_18900 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_18900 IPR022310 NAD/GMP synthase NIY05_18900 IPR025777 GMP synthetase ATP pyrophosphatase domain NIY05_18900 IPR022955 GMP synthase NIY05_18900 IPR004739 GMP synthase, glutamine amidotransferase NIY05_18900 IPR001674 GMP synthase, C-terminal NIY05_18900 IPR017926 Glutamine amidotransferase NIY05_18900 IPR029062 Class I glutamine amidotransferase-like NIY05_18905 IPR007383 Protein of unknown function DUF445 NIY05_18905 IPR016991 Protein of unknown function UCP032178 NIY05_18910 IPR032808 DoxX family NIY05_18915 IPR032818 DedA family NIY05_18915 IPR032816 SNARE associated Golgi protein NIY05_18930 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_18930 IPR025669 AAA domain NIY05_18940 IPR002634 BolA protein NIY05_18940 IPR036065 BolA-like superfamily NIY05_18955 IPR008278 4'-phosphopantetheinyl transferase domain NIY05_18955 IPR004568 Phosphopantetheine-protein transferase domain NIY05_18955 IPR037143 4'-phosphopantetheinyl transferase domain superfamily NIY05_18960 IPR029058 Alpha/Beta hydrolase fold NIY05_18960 IPR000073 Alpha/beta hydrolase fold-1 NIY05_18960 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase NIY05_18980 IPR029058 Alpha/Beta hydrolase fold NIY05_18980 IPR036736 ACP-like superfamily NIY05_18980 IPR032821 Ketoacyl-synthetase, C-terminal extension NIY05_18980 IPR014031 Beta-ketoacyl synthase, C-terminal NIY05_18980 IPR018201 Beta-ketoacyl synthase, active site NIY05_18980 IPR020615 Thiolase, acyl-enzyme intermediate active site NIY05_18980 IPR016039 Thiolase-like NIY05_18980 IPR001031 Thioesterase NIY05_18980 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_18980 IPR006162 Phosphopantetheine attachment site NIY05_18980 IPR013217 Methyltransferase type 12 NIY05_18980 IPR009081 Phosphopantetheine binding ACP domain NIY05_18980 IPR020806 Polyketide synthase, phosphopantetheine-binding domain NIY05_18980 IPR042104 Polyketide synthase, dehydratase domain superfamily NIY05_18980 IPR020807 Polyketide synthase, dehydratase domain NIY05_18980 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain NIY05_18980 IPR014030 Beta-ketoacyl synthase, N-terminal NIY05_18985 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_18985 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_18985 IPR006089 Acyl-CoA dehydrogenase, conserved site NIY05_18985 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_18985 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_18985 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_18985 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_18990 IPR000873 AMP-dependent synthetase/ligase NIY05_18990 IPR042099 AMP-dependent synthetase-like superfamily NIY05_18995 IPR016032 Signal transduction response regulator, C-terminal effector NIY05_18995 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain NIY05_18995 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily NIY05_18995 IPR000792 Transcription regulator LuxR, C-terminal NIY05_18995 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_19005 IPR016181 Acyl-CoA N-acyltransferase NIY05_19005 IPR001690 Autoinducer synthase NIY05_19010 IPR020846 Major facilitator superfamily domain NIY05_19010 IPR011701 Major facilitator superfamily NIY05_19010 IPR036259 MFS transporter superfamily NIY05_19010 IPR004736 MFS transporter, metabolite:H symporter NIY05_19010 IPR005829 Sugar transporter, conserved site NIY05_19010 IPR005828 Major facilitator, sugar transporter-like NIY05_19015 IPR029045 ClpP/crotonase-like domain superfamily NIY05_19015 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site NIY05_19015 IPR001753 Enoyl-CoA hydratase/isomerase NIY05_19015 IPR014748 Enoyl-CoA hydratase, C-terminal NIY05_19020 IPR014748 Enoyl-CoA hydratase, C-terminal NIY05_19020 IPR001753 Enoyl-CoA hydratase/isomerase NIY05_19020 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site NIY05_19020 IPR029045 ClpP/crotonase-like domain superfamily NIY05_19025 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NIY05_19025 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NIY05_19025 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NIY05_19025 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NIY05_19025 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NIY05_19025 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NIY05_19025 IPR006089 Acyl-CoA dehydrogenase, conserved site NIY05_19030 IPR020845 AMP-binding, conserved site NIY05_19030 IPR042099 AMP-dependent synthetase-like superfamily NIY05_19030 IPR000873 AMP-dependent synthetase/ligase NIY05_19030 IPR025110 AMP-binding enzyme, C-terminal domain NIY05_19035 IPR013328 6-phosphogluconate dehydrogenase, domain 2 NIY05_19035 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NIY05_19035 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site NIY05_19035 IPR011548 3-hydroxyisobutyrate dehydrogenase NIY05_19035 IPR015815 3-hydroxyisobutyrate dehydrogenase-related NIY05_19035 IPR036291 NAD(P)-binding domain superfamily NIY05_19035 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding NIY05_19035 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain NIY05_19040 IPR016162 Aldehyde dehydrogenase, N-terminal NIY05_19040 IPR016163 Aldehyde dehydrogenase, C-terminal NIY05_19040 IPR015590 Aldehyde dehydrogenase domain NIY05_19040 IPR016160 Aldehyde dehydrogenase, cysteine active site NIY05_19040 IPR010061 Methylmalonate-semialdehyde dehydrogenase NIY05_19040 IPR016161 Aldehyde/histidinol dehydrogenase NIY05_19050 IPR004840 Amino acid permease, conserved site NIY05_19050 IPR004841 Amino acid permease/ SLC12A domain NIY05_19055 IPR004840 Amino acid permease, conserved site NIY05_19055 IPR004841 Amino acid permease/ SLC12A domain NIY05_19060 IPR019897 RidA, conserved site NIY05_19060 IPR035959 RutC-like superfamily NIY05_19060 IPR006175 YjgF/YER057c/UK114 family NIY05_19060 IPR035709 RutC family, YoaB-like NIY05_19065 IPR011079 Alanine racemase, C-terminal NIY05_19065 IPR000821 Alanine racemase NIY05_19065 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site NIY05_19065 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal NIY05_19065 IPR029066 PLP-binding barrel NIY05_19065 IPR001608 Alanine racemase, N-terminal NIY05_19070 IPR023080 D-amino acid dehydrogenase DadA NIY05_19070 IPR036188 FAD/NAD(P)-binding domain superfamily NIY05_19070 IPR006076 FAD dependent oxidoreductase NIY05_19075 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NIY05_19075 IPR019888 Transcription regulator AsnC-type NIY05_19075 IPR036390 Winged helix DNA-binding domain superfamily NIY05_19075 IPR011008 Dimeric alpha-beta barrel NIY05_19075 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NIY05_19075 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_19075 IPR000485 AsnC-type HTH domain NIY05_19075 IPR011991 ArsR-like helix-turn-helix domain NIY05_19085 IPR039423 TonB-dependent receptor-like NIY05_19085 IPR000531 TonB-dependent receptor-like, beta-barrel NIY05_19085 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NIY05_19085 IPR010105 TonB-dependent siderophore receptor NIY05_19085 IPR037066 TonB-dependent receptor, plug domain superfamily NIY05_19085 IPR012910 TonB-dependent receptor, plug domain NIY05_19100 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site NIY05_19100 IPR006225 Pseudouridine synthase, RluC/RluD NIY05_19100 IPR020103 Pseudouridine synthase, catalytic domain superfamily NIY05_19100 IPR006145 Pseudouridine synthase, RsuA/RluA NIY05_19115 IPR009057 Homeobox-like domain superfamily NIY05_19115 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NIY05_19115 IPR013572 Transcription regulator MAATS, C-terminal NIY05_19115 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NIY05_19115 IPR001647 DNA-binding HTH domain, TetR-type NIY05_19125 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain NIY05_19125 IPR000794 Beta-ketoacyl synthase NIY05_19125 IPR018201 Beta-ketoacyl synthase, active site NIY05_19125 IPR014031 Beta-ketoacyl synthase, C-terminal NIY05_19125 IPR014030 Beta-ketoacyl synthase, N-terminal NIY05_19125 IPR016039 Thiolase-like NIY05_19160 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent NIY05_19160 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 NIY05_19160 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain NIY05_19160 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NIY05_19160 IPR006249 Aconitase/Iron-responsive element-binding protein 2 NIY05_19160 IPR036008 Aconitase, iron-sulfur domain NIY05_19160 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain NIY05_19165 IPR016142 Citrate synthase-like, large alpha subdomain NIY05_19165 IPR016143 Citrate synthase-like, small alpha subdomain NIY05_19165 IPR002020 Citrate synthase NIY05_19165 IPR019810 Citrate synthase active site NIY05_19165 IPR024176 Citrate synthase, bacterial-type NIY05_19165 IPR036969 Citrate synthase superfamily NIY05_19165 IPR011278 2-methylcitrate synthase/citrate synthase type I NIY05_19170 IPR039556 ICL/PEPM domain NIY05_19170 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site NIY05_19170 IPR012695 2-methylisocitrate lyase NIY05_19170 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily NIY05_19170 IPR040442 Pyruvate kinase-like domain superfamily NIY05_19175 IPR011711 GntR, C-terminal NIY05_19175 IPR008920 Transcription regulator FadR/GntR, C-terminal NIY05_19175 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_19175 IPR000524 Transcription regulator HTH, GntR NIY05_19175 IPR000485 AsnC-type HTH domain NIY05_19175 IPR036390 Winged helix DNA-binding domain superfamily NIY05_19185 IPR000796 Aspartate/other aminotransferase NIY05_19185 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site NIY05_19185 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_19185 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_19185 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_19185 IPR004839 Aminotransferase, class I/classII NIY05_19190 IPR006094 FAD linked oxidase, N-terminal NIY05_19190 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal NIY05_19190 IPR016164 FAD-linked oxidase-like, C-terminal NIY05_19190 IPR016169 FAD-binding, type PCMH, subdomain 2 NIY05_19190 IPR036318 FAD-binding, type PCMH-like superfamily NIY05_19190 IPR016166 FAD-binding domain, PCMH-type NIY05_19190 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 NIY05_19190 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 NIY05_19190 IPR016167 FAD-binding, type PCMH, subdomain 1 NIY05_19190 IPR012256 D-lactate dehydrogenase NIY05_19195 IPR013785 Aldolase-type TIM barrel NIY05_19195 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site NIY05_19195 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent NIY05_19195 IPR020920 L-lactate dehydrogenase, bacterial NIY05_19195 IPR000262 FMN-dependent dehydrogenase NIY05_19195 IPR037396 FMN hydroxy acid dehydrogenase domain NIY05_19200 IPR000524 Transcription regulator HTH, GntR NIY05_19200 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_19200 IPR036390 Winged helix DNA-binding domain superfamily NIY05_19200 IPR008920 Transcription regulator FadR/GntR, C-terminal NIY05_19200 IPR011711 GntR, C-terminal NIY05_19205 IPR003804 L-lactate permease NIY05_19210 IPR005841 Alpha-D-phosphohexomutase superfamily NIY05_19210 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily NIY05_19210 IPR016066 Alpha-D-phosphohexomutase, conserved site NIY05_19210 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II NIY05_19210 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III NIY05_19210 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I NIY05_19210 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III NIY05_19210 IPR005843 Alpha-D-phosphohexomutase, C-terminal NIY05_19215 IPR016040 NAD(P)-binding domain NIY05_19215 IPR036291 NAD(P)-binding domain superfamily NIY05_19215 IPR005886 UDP-glucose 4-epimerase NIY05_19220 IPR001672 Phosphoglucose isomerase (PGI) NIY05_19220 IPR023096 Phosphoglucose isomerase, C-terminal NIY05_19220 IPR018189 Phosphoglucose isomerase, conserved site NIY05_19220 IPR035482 Phosphoglucose isomerase, SIS domain 2 NIY05_19220 IPR035476 Phosphoglucose isomerase, SIS domain 1 NIY05_19225 IPR017476 UDP-glucose/GDP-mannose dehydrogenase NIY05_19225 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type NIY05_19225 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal NIY05_19225 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation NIY05_19225 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily NIY05_19225 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal NIY05_19225 IPR036291 NAD(P)-binding domain superfamily NIY05_19225 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NIY05_19230 IPR029044 Nucleotide-diphospho-sugar transferases NIY05_19230 IPR005835 Nucleotidyl transferase domain NIY05_19230 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type NIY05_19235 IPR003362 Bacterial sugar transferase NIY05_19240 IPR001173 Glycosyltransferase 2-like NIY05_19240 IPR029044 Nucleotide-diphospho-sugar transferases NIY05_19270 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily NIY05_19270 IPR013785 Aldolase-type TIM barrel NIY05_19270 IPR013132 N-acetylneuraminic acid synthase, N-terminal NIY05_19270 IPR020030 Pseudaminic acid biosynthesis, PseI NIY05_19270 IPR013974 SAF domain NIY05_19270 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal NIY05_19285 IPR020039 Pseudaminic acid cytidylyltransferase NIY05_19285 IPR029044 Nucleotide-diphospho-sugar transferases NIY05_19285 IPR003329 Acylneuraminate cytidylyltransferase NIY05_19290 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase NIY05_19290 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NIY05_19290 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NIY05_19290 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NIY05_19290 IPR015424 Pyridoxal phosphate-dependent transferase NIY05_19295 IPR036291 NAD(P)-binding domain superfamily NIY05_19295 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain NIY05_19295 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) NIY05_19300 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NIY05_19300 IPR036291 NAD(P)-binding domain superfamily NIY05_19300 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase NIY05_19300 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal NIY05_19300 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation NIY05_19300 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily NIY05_19300 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal NIY05_19300 IPR017476 UDP-glucose/GDP-mannose dehydrogenase NIY05_19305 IPR019554 Soluble ligand binding domain NIY05_19305 IPR003715 Polysaccharide export protein NIY05_19305 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain NIY05_19310 IPR017867 Protein-tyrosine phosphatase, low molecular weight NIY05_19310 IPR023485 Phosphotyrosine protein phosphatase I NIY05_19310 IPR036196 Phosphotyrosine protein phosphatase I superfamily NIY05_19315 IPR003856 Polysaccharide chain length determinant N-terminal domain NIY05_19315 IPR005702 Exopolysaccharide synthesis protein NIY05_19315 IPR032807 Tyrosine kinase, G-rich domain NIY05_19315 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_19315 IPR025669 AAA domain NIY05_19320 IPR008104 Macrophage infectivity potentiator NIY05_19320 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain NIY05_19320 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal NIY05_19320 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily NIY05_19325 IPR008104 Macrophage infectivity potentiator NIY05_19325 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain NIY05_19325 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal NIY05_19325 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily NIY05_19330 IPR004268 Peptidoglycan biosynthesis protein MurJ NIY05_19335 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily NIY05_19335 IPR002502 N-acetylmuramoyl-L-alanine amidase domain NIY05_19340 IPR004393 Nicotinate-nucleotide pyrophosphorylase NIY05_19340 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD NIY05_19340 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal NIY05_19340 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily NIY05_19340 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal NIY05_19340 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal NIY05_19340 IPR013785 Aldolase-type TIM barrel NIY05_19355 IPR015847 Exoribonuclease, phosphorolytic domain 2 NIY05_19355 IPR001247 Exoribonuclease, phosphorolytic domain 1 NIY05_19355 IPR020568 Ribosomal protein S5 domain 2-type fold NIY05_19355 IPR002381 Ribonuclease PH, bacterial-type NIY05_19355 IPR018336 Ribonuclease PH, conserved site NIY05_19355 IPR036345 Exoribonuclease, PH domain 2 superfamily NIY05_19355 IPR027408 PNPase/RNase PH domain superfamily NIY05_19360 IPR005804 Fatty acid desaturase domain NIY05_19365 IPR001433 Oxidoreductase FAD/NAD(P)-binding NIY05_19365 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NIY05_19365 IPR017938 Riboflavin synthase-like beta-barrel NIY05_19370 IPR009057 Homeobox-like domain superfamily NIY05_19370 IPR023764 Transcriptional repressor HTH, FabR NIY05_19370 IPR001647 DNA-binding HTH domain, TetR-type NIY05_19375 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NIY05_19375 IPR013571 Transcription regulator QacR, C-terminal NIY05_19375 IPR009057 Homeobox-like domain superfamily NIY05_19375 IPR001647 DNA-binding HTH domain, TetR-type NIY05_19375 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NIY05_19380 IPR001853 DSBA-like thioredoxin domain NIY05_19380 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL NIY05_19380 IPR036249 Thioredoxin-like superfamily NIY05_19380 IPR017937 Thioredoxin, conserved site NIY05_19380 IPR013766 Thioredoxin domain NIY05_19385 IPR010233 Ubiquinone biosynthesis O-methyltransferase NIY05_19385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NIY05_19390 IPR036412 HAD-like superfamily NIY05_19390 IPR006439 HAD hydrolase, subfamily IA NIY05_19390 IPR041492 Haloacid dehalogenase-like hydrolase NIY05_19390 IPR023214 HAD superfamily NIY05_19390 IPR023198 Phosphoglycolate phosphatase-like, domain 2 NIY05_19390 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic NIY05_19395 IPR036291 NAD(P)-binding domain superfamily NIY05_19395 IPR020904 Short-chain dehydrogenase/reductase, conserved site NIY05_19395 IPR002347 Short-chain dehydrogenase/reductase SDR NIY05_19410 IPR010167 Amino-acid N-acetyltransferase NIY05_19410 IPR036393 Acetylglutamate kinase-like superfamily NIY05_19410 IPR016181 Acyl-CoA N-acyltransferase NIY05_19410 IPR001048 Aspartate/glutamate/uridylate kinase NIY05_19410 IPR000182 GNAT domain NIY05_19410 IPR033719 N-acetylglutamate synthase, kinase-like domain NIY05_19415 IPR010067 Aliphatic sulfonates-binding protein NIY05_19415 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NIY05_19415 IPR015168 SsuA/THI5-like NIY05_19420 IPR015168 SsuA/THI5-like NIY05_19420 IPR010067 Aliphatic sulfonates-binding protein NIY05_19420 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NIY05_19425 IPR036661 Luciferase-like domain superfamily NIY05_19425 IPR011251 Luciferase-like domain NIY05_19425 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent NIY05_19430 IPR035906 MetI-like superfamily NIY05_19430 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NIY05_19435 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB NIY05_19435 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_19435 IPR003439 ABC transporter-like NIY05_19435 IPR003593 AAA+ ATPase domain NIY05_19440 IPR013573 Transcription regulator YcdC, C-terminal NIY05_19440 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NIY05_19440 IPR001647 DNA-binding HTH domain, TetR-type NIY05_19440 IPR009057 Homeobox-like domain superfamily NIY05_19440 IPR019915 Transcription regulator, pyrimidine utilisation, RutR NIY05_19445 IPR035994 Nucleoside phosphorylase superfamily NIY05_19445 IPR000845 Nucleoside phosphorylase domain NIY05_19445 IPR010049 MTA/SAH nucleosidase NIY05_19455 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_19455 IPR023465 Riboflavin kinase domain superfamily NIY05_19455 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic NIY05_19455 IPR002606 Riboflavin kinase, bacterial NIY05_19455 IPR023468 Riboflavin kinase NIY05_19455 IPR015864 FAD synthetase NIY05_19460 IPR023585 Isoleucine-tRNA ligase, type 1 NIY05_19460 IPR002301 Isoleucine-tRNA ligase NIY05_19460 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain NIY05_19460 IPR010663 Zinc finger, FPG/IleRS-type NIY05_19460 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain NIY05_19460 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding NIY05_19460 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NIY05_19460 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NIY05_19460 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding NIY05_19460 IPR002300 Aminoacyl-tRNA synthetase, class Ia NIY05_19465 IPR001872 Peptidase A8, signal peptidase II NIY05_19470 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain NIY05_19510 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain NIY05_19510 IPR029000 Cyclophilin-like domain superfamily NIY05_19510 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site NIY05_19515 IPR013094 Alpha/beta hydrolase fold-3 NIY05_19515 IPR029058 Alpha/Beta hydrolase fold NIY05_19535 IPR005119 LysR, substrate-binding NIY05_19535 IPR000847 Transcription regulator HTH, LysR NIY05_19535 IPR036388 Winged helix-like DNA-binding domain superfamily NIY05_19535 IPR036390 Winged helix DNA-binding domain superfamily NIY05_19540 IPR000740 GrpE nucleotide exchange factor NIY05_19540 IPR013805 GrpE nucleotide exchange factor, coiled-coil NIY05_19540 IPR009012 GrpE nucleotide exchange factor, head NIY05_19545 IPR012725 Chaperone DnaK NIY05_19545 IPR018181 Heat shock protein 70, conserved site NIY05_19545 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily NIY05_19545 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily NIY05_19545 IPR013126 Heat shock protein 70 family NIY05_19565 IPR031304 Transglycosylase SLT domain 2 NIY05_19565 IPR011757 Lytic transglycosylase MltB NIY05_19565 IPR023346 Lysozyme-like domain superfamily NIY05_19570 IPR011054 Rudiment single hybrid motif NIY05_19570 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain NIY05_19570 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit NIY05_19570 IPR011761 ATP-grasp fold NIY05_19570 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type NIY05_19570 IPR013815 ATP-grasp fold, subdomain 1 NIY05_19570 IPR016185 Pre-ATP-grasp domain superfamily NIY05_19575 IPR024694 PurE, prokaryotic type NIY05_19575 IPR000031 PurE domain NIY05_19575 IPR033747 Class I PurE NIY05_19575 IPR035893 PurE domain superfamily NIY05_19585 IPR005757 Murein peptide ligase NIY05_19585 IPR036565 Mur-like, catalytic domain superfamily NIY05_19585 IPR004101 Mur ligase, C-terminal NIY05_19585 IPR036615 Mur ligase, C-terminal domain superfamily NIY05_19585 IPR013221 Mur ligase, central NIY05_19585 IPR000713 Mur ligase, N-terminal catalytic domain NIY05_19595 IPR033879 Undecaprenyl-diphosphatase NIY05_19595 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily NIY05_19595 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NIY05_19600 IPR022369 Integral membrane protein TerC, riboswitch-linked NIY05_19600 IPR005496 Integral membrane protein TerC NIY05_19610 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain NIY05_19610 IPR016185 Pre-ATP-grasp domain superfamily NIY05_19615 IPR017941 Rieske [2Fe-2S] iron-sulphur domain NIY05_19615 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NIY05_19615 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site NIY05_19620 IPR006680 Amidohydrolase-related NIY05_19620 IPR032466 Metal-dependent hydrolase NIY05_19620 IPR011059 Metal-dependent hydrolase, composite domain superfamily NIY05_19620 IPR014311 Guanine deaminase NIY05_19625 IPR005904 Hypoxanthine phosphoribosyl transferase NIY05_19625 IPR000836 Phosphoribosyltransferase domain NIY05_19625 IPR029057 Phosphoribosyltransferase-like NIY05_19635 IPR033954 Disulphide bond isomerase, DsbC/G NIY05_19635 IPR017937 Thioredoxin, conserved site NIY05_19635 IPR036249 Thioredoxin-like superfamily NIY05_19635 IPR012336 Thioredoxin-like fold NIY05_19635 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily NIY05_19635 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal NIY05_19640 IPR002524 Cation efflux protein NIY05_19640 IPR027470 Cation efflux protein, cytoplasmic domain NIY05_19640 IPR036837 Cation efflux protein, cytoplasmic domain superfamily NIY05_19640 IPR027469 Cation efflux transmembrane domain superfamily NIY05_19645 IPR003735 Metal-sensitive transcriptional repressor NIY05_19645 IPR038390 Metal-sensitive transcriptional repressor superfamily NIY05_19650 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 NIY05_19650 IPR005225 Small GTP-binding protein domain NIY05_19650 IPR027417 P-loop containing nucleoside triphosphate hydrolase NIY05_19650 IPR027368 tRNA modification GTPase MnmE domain 2 NIY05_19650 IPR025867 MnmE, helical domain NIY05_19650 IPR006073 GTP binding domain NIY05_19650 IPR018948 GTP-binding protein TrmE, N-terminal NIY05_19650 IPR031168 TrmE-type guanine nucleotide-binding domain NIY05_19650 IPR004520 tRNA modification GTPase MnmE NIY05_19655 IPR038210 Membrane insertase YidC, periplasmic domain NIY05_19655 IPR019998 Membrane insertase YidC NIY05_19655 IPR028055 Membrane insertase YidC/Oxa1, C-terminal NIY05_19655 IPR028053 Membrane insertase YidC, N-terminal NIY05_19655 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 NIY05_19655 IPR038221 YidC, periplasmic domain superfamily NIY05_19660 IPR002696 Putative membrane protein insertion efficiency factor NIY05_19665 IPR020568 Ribosomal protein S5 domain 2-type fold NIY05_19665 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NIY05_19665 IPR000100 Ribonuclease P NIY05_19665 IPR020539 Ribonuclease P, conserved site NIY05_19670 IPR000271 Ribosomal protein L34 NIY05_19670 IPR020939 Ribosomal protein L34, conserved site