CBI29_00001 PF00579 tRNA synthetases class I (W and Y) CBI29_00002 PF03702 Uncharacterised protein family (UPF0075) CBI29_00003 PF00561 alpha/beta hydrolase fold CBI29_00004 PF01521 Iron-sulphur cluster biosynthesis CBI29_00007 PF01609 Transposase DDE domain CBI29_00008 PF01609 Transposase DDE domain CBI29_00009 PF00144 Beta-lactamase CBI29_00010 PF13387 CBI29_00010 CBI29_00011 PF01609 Transposase DDE domain CBI29_00012 PF01609 Transposase DDE domain CBI29_00014 PF00005 ABC transporter CBI29_00014 PF12848 ABC transporter CBI29_00015 PF09335 CBI29_00015 CBI29_00016 PF07361 Cytochrome b562 CBI29_00017 PF00204 DNA gyrase B CBI29_00017 PF00986 DNA gyrase B subunit, carboxyl terminus CBI29_00017 PF01751 Toprim domain CBI29_00017 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_00018 PF02463 RecF/RecN/SMC N terminal domain CBI29_00019 PF00712 DNA polymerase III beta subunit, N-terminal domain CBI29_00019 PF02767 DNA polymerase III beta subunit, central domain CBI29_00019 PF02768 DNA polymerase III beta subunit, C-terminal domain CBI29_00020 PF00308 Bacterial dnaA protein CBI29_00020 PF08299 Bacterial dnaA protein helix-turn-helix CBI29_00020 PF11638 DnaA N-terminal domain CBI29_00021 PF00468 Ribosomal protein L34 CBI29_00022 PF00825 Ribonuclease P CBI29_00023 PF01809 CBI29_00023 CBI29_00024 PF02096 60Kd inner membrane protein CBI29_00024 PF14849 YidC periplasmic domain CBI29_00025 PF01926 50S ribosome-binding GTPase CBI29_00025 PF10396 GTP-binding protein TrmE N-terminus CBI29_00025 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE CBI29_00026 PF02583 Metal-sensitive transcriptional repressor CBI29_00027 PF01545 Cation efflux family CBI29_00028 PF10411 Disulfide bond isomerase protein N-terminus CBI29_00028 PF13098 Thioredoxin-like domain CBI29_00029 PF04226 CBI29_00029 CBI29_00030 PF00156 Phosphoribosyl transferase domain CBI29_00032 PF01979 Amidohydrolase family CBI29_00033 PF00355 Rieske [2Fe-2S] domain CBI29_00034 PF03738 Glutathionylspermidine synthase preATP-grasp CBI29_00036 PF03741 CBI29_00036 CBI29_00037 PF01569 PAP2 superfamily CBI29_00038 PF06772 CBI29_00038 CBI29_00039 PF01225 Mur ligase family, catalytic domain CBI29_00039 PF02875 Mur ligase family, glutamate ligase domain CBI29_00039 PF08245 Mur ligase middle domain CBI29_00040 PF04342 CBI29_00040 CBI29_00041 PF00731 AIR carboxylase CBI29_00042 PF02222 ATP-grasp domain CBI29_00044 PF01471 Putative peptidoglycan binding domain CBI29_00044 PF13406 Transglycosylase SLT domain CBI29_00046 PF00413 Matrixin CBI29_00047 PF00413 Matrixin CBI29_00048 PF00012 Hsp70 protein CBI29_00049 PF01025 GrpE CBI29_00050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_00050 PF03466 LysR substrate binding domain CBI29_00054 PF07859 alpha/beta hydrolase fold CBI29_00055 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CBI29_00058 PF12796 Ankyrin repeats (3 copies) CBI29_00059 PF03358 NADPH-dependent FMN reductase CBI29_00060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CBI29_00061 PF01252 CBI29_00061 CBI29_00062 PF00133 tRNA synthetases class I (I, L, M and V) CBI29_00062 PF06827 Zinc finger found in FPG and IleRS CBI29_00062 PF08264 Anticodon-binding domain of tRNA CBI29_00063 PF01687 Riboflavin kinase CBI29_00063 PF06574 FAD synthetase CBI29_00064 PF03595 Voltage-dependent anion channel CBI29_00065 PF01048 Phosphorylase superfamily CBI29_00066 PF00440 Bacterial regulatory proteins, tetR family CBI29_00066 PF08362 YcdC-like protein, C-terminal region CBI29_00067 PF00005 ABC transporter CBI29_00068 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_00069 PF00296 Luciferase-like monooxygenase CBI29_00070 PF13379 NMT1-like family CBI29_00071 PF09084 NMT1/THI5 like CBI29_00072 PF00583 Acetyltransferase (GNAT) family CBI29_00072 PF00696 Amino acid kinase family CBI29_00073 PF11776 Domain of unknown function (DUF3315) CBI29_00074 PF11776 Domain of unknown function (DUF3315) CBI29_00075 PF00106 short chain dehydrogenase CBI29_00076 PF13419 Haloacid dehalogenase-like hydrolase CBI29_00077 PF13489 Methyltransferase domain CBI29_00078 PF01323 DSBA-like thioredoxin domain CBI29_00079 PF00440 Bacterial regulatory proteins, tetR family CBI29_00080 PF00440 Bacterial regulatory proteins, tetR family CBI29_00081 PF00175 Oxidoreductase NAD-binding domain CBI29_00081 PF00970 Oxidoreductase FAD-binding domain CBI29_00082 PF00487 CBI29_00082 CBI29_00084 PF04185 Phosphoesterase family CBI29_00084 PF05506 CBI29_00084 CBI29_00086 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CBI29_00086 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CBI29_00087 PF01510 N-acetylmuramoyl-L-alanine amidase CBI29_00088 PF03023 CBI29_00088 CBI29_00089 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CBI29_00089 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CBI29_00090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CBI29_00090 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CBI29_00091 PF02706 Chain length determinant protein CBI29_00091 PF13614 AAA domain CBI29_00091 PF13807 CBI29_00091 CBI29_00092 PF01451 Low molecular weight phosphotyrosine protein phosphatase CBI29_00093 PF02563 Polysaccharide biosynthesis/export protein CBI29_00094 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CBI29_00094 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CBI29_00094 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CBI29_00095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CBI29_00095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CBI29_00096 PF00132 Bacterial transferase hexapeptide (six repeats) CBI29_00097 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CBI29_00098 PF13477 Glycosyl transferase 4-like CBI29_00099 PF01943 CBI29_00099 CBI29_00101 PF00534 Glycosyl transferases group 1 CBI29_00102 PF00534 Glycosyl transferases group 1 CBI29_00102 PF13439 Glycosyltransferase Family 4 CBI29_00103 PF02397 CBI29_00103 CBI29_00104 PF00132 Bacterial transferase hexapeptide (six repeats) CBI29_00104 PF14602 Hexapeptide repeat of succinyl-transferase CBI29_00105 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CBI29_00106 PF02719 Polysaccharide biosynthesis protein CBI29_00106 PF13727 CoA-binding domain CBI29_00108 PF00483 Nucleotidyl transferase CBI29_00109 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CBI29_00109 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CBI29_00110 PF00342 Phosphoglucose isomerase CBI29_00111 PF01370 NAD dependent epimerase/dehydratase family CBI29_00112 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CBI29_00112 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CBI29_00112 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CBI29_00112 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CBI29_00113 PF02652 CBI29_00113 CBI29_00114 PF00392 Bacterial regulatory proteins, gntR family CBI29_00114 PF07729 FCD domain CBI29_00115 PF01070 FMN-dependent dehydrogenase CBI29_00116 PF01565 FAD binding domain CBI29_00116 PF09330 D-lactate dehydrogenase, membrane binding CBI29_00117 PF00155 Aminotransferase class I and II CBI29_00118 PF00392 Bacterial regulatory proteins, gntR family CBI29_00118 PF07729 FCD domain CBI29_00119 PF13714 Phosphoenolpyruvate phosphomutase CBI29_00120 PF00285 Citrate synthase CBI29_00121 PF00330 Aconitase family (aconitate hydratase) CBI29_00121 PF00694 Aconitase C-terminal domain CBI29_00123 PF13737 CBI29_00123 CBI29_00124 PF16133 CBI29_00124 CBI29_00125 PF00872 CBI29_00125 CBI29_00126 PF00106 short chain dehydrogenase CBI29_00127 PF06210 CBI29_00127 CBI29_00128 PF00849 RNA pseudouridylate synthase CBI29_00129 PF06877 Regulator of ribonuclease activity B CBI29_00130 PF12680 SnoaL-like domain CBI29_00131 PF00593 TonB dependent receptor CBI29_00131 PF07715 TonB-dependent Receptor Plug Domain CBI29_00132 PF07786 CBI29_00132 CBI29_00133 PF01037 AsnC family CBI29_00133 PF13412 Winged helix-turn-helix DNA-binding CBI29_00134 PF01266 FAD dependent oxidoreductase CBI29_00135 PF00842 Alanine racemase, C-terminal domain CBI29_00135 PF01168 Alanine racemase, N-terminal domain CBI29_00136 PF01042 Endoribonuclease L-PSP CBI29_00137 PF00324 Amino acid permease CBI29_00138 PF00324 Amino acid permease CBI29_00139 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_00139 PF03466 LysR substrate binding domain CBI29_00140 PF00171 Aldehyde dehydrogenase family CBI29_00141 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CBI29_00141 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CBI29_00142 PF00501 AMP-binding enzyme CBI29_00142 PF13193 AMP-binding enzyme C-terminal domain CBI29_00143 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_00143 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_00143 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_00144 PF00378 Enoyl-CoA hydratase/isomerase family CBI29_00145 PF16113 CBI29_00145 CBI29_00146 PF07690 Major Facilitator Superfamily CBI29_00147 PF00765 Autoinducer synthetase CBI29_00148 PF16245 CBI29_00148 CBI29_00149 PF00196 Bacterial regulatory proteins, luxR family CBI29_00149 PF03472 Autoinducer binding domain CBI29_00150 PF00501 AMP-binding enzyme CBI29_00151 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_00151 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_00152 PF00550 Phosphopantetheine attachment site CBI29_00153 PF00501 AMP-binding enzyme CBI29_00153 PF00550 Phosphopantetheine attachment site CBI29_00153 PF00668 Condensation domain CBI29_00153 PF00975 Thioesterase domain CBI29_00153 PF13193 AMP-binding enzyme C-terminal domain CBI29_00154 PF03176 MMPL family CBI29_00154 PF10604 Polyketide cyclase / dehydrase and lipid transport CBI29_00154 PF17131 CBI29_00154 CBI29_00156 PF01370 NAD dependent epimerase/dehydratase family CBI29_00156 PF12697 Alpha/beta hydrolase family CBI29_00157 PF01648 4'-phosphopantetheinyl transferase superfamily CBI29_00160 PF01722 BolA-like protein CBI29_00161 PF04247 CBI29_00161 CBI29_00162 PF13614 AAA domain CBI29_00164 PF01810 CBI29_00164 CBI29_00165 PF09335 CBI29_00165 CBI29_00166 PF07681 CBI29_00166 CBI29_00167 PF04286 CBI29_00167 CBI29_00168 PF00117 Glutamine amidotransferase class-I CBI29_00168 PF00958 GMP synthase C terminal domain CBI29_00168 PF02540 NAD synthase CBI29_00169 PF01909 Nucleotidyltransferase domain CBI29_00169 PF13427 CBI29_00169 CBI29_00170 PF03551 Transcriptional regulator PadR-like family CBI29_00171 PF12977 Domain of Unknown Function with PDB structure (DUF3861) CBI29_00172 PF02678 Pirin CBI29_00172 PF05726 Pirin C-terminal cupin domain CBI29_00173 PF02566 OsmC-like protein CBI29_00174 PF02798 Glutathione S-transferase, N-terminal domain CBI29_00174 PF14497 Glutathione S-transferase, C-terminal domain CBI29_00175 PF05036 Sporulation related domain CBI29_00176 PF00750 tRNA synthetases class I (R) CBI29_00176 PF03485 Arginyl tRNA synthetase N terminal domain CBI29_00176 PF05746 DALR anticodon binding domain CBI29_00177 PF00390 Malic enzyme, N-terminal domain CBI29_00177 PF03949 Malic enzyme, NAD binding domain CBI29_00178 PF04261 Dyp-type peroxidase family CBI29_00179 PF01810 CBI29_00179 CBI29_00180 PF00950 CBI29_00180 CBI29_00181 PF00005 ABC transporter CBI29_00182 PF01475 Ferric uptake regulator family CBI29_00183 PF01297 Periplasmic solute binding protein family CBI29_00184 PF03899 CBI29_00184 CBI29_00185 PF00119 ATP synthase A chain CBI29_00186 PF00137 ATP synthase subunit C CBI29_00187 PF00430 ATP synthase B/B' CF(0) CBI29_00188 PF00213 ATP synthase delta (OSCP) subunit CBI29_00189 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CBI29_00189 PF00306 ATP synthase alpha/beta chain, C terminal domain CBI29_00189 PF02874 ATP synthase alpha/beta family, beta-barrel domain CBI29_00190 PF00231 ATP synthase CBI29_00191 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CBI29_00191 PF02874 ATP synthase alpha/beta family, beta-barrel domain CBI29_00192 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CBI29_00194 PF00255 Glutathione peroxidase CBI29_00195 PF12833 Helix-turn-helix domain CBI29_00196 PF07690 Major Facilitator Superfamily CBI29_00197 PF00440 Bacterial regulatory proteins, tetR family CBI29_00198 PF00892 EamA-like transporter family CBI29_00199 PF01300 Telomere recombination CBI29_00200 PF02481 DNA recombination-mediator protein A CBI29_00201 PF01476 LysM domain CBI29_00202 PF01327 Polypeptide deformylase CBI29_00203 PF11162 CBI29_00203 CBI29_00204 PF00593 TonB dependent receptor CBI29_00204 PF07715 TonB-dependent Receptor Plug Domain CBI29_00206 PF09995 CBI29_00206 CBI29_00210 PF13527 Acetyltransferase (GNAT) domain CBI29_00211 PF00291 Pyridoxal-phosphate dependent enzyme CBI29_00212 PF01464 Transglycosylase SLT domain CBI29_00213 PF03358 NADPH-dependent FMN reductase CBI29_00214 PF11158 CBI29_00214 CBI29_00215 PF13411 MerR HTH family regulatory protein CBI29_00216 PF13449 Esterase-like activity of phytase CBI29_00217 PF04055 Radical SAM superfamily CBI29_00217 PF08497 CBI29_00217 CBI29_00217 PF11842 CBI29_00217 CBI29_00218 PF10881 CBI29_00218 CBI29_00219 PF01042 Endoribonuclease L-PSP CBI29_00220 PF00817 impB/mucB/samB family CBI29_00220 PF11798 IMS family HHH motif CBI29_00220 PF11799 impB/mucB/samB family C-terminal domain CBI29_00221 PF01183 Glycosyl hydrolases family 25 CBI29_00222 PF07690 Major Facilitator Superfamily CBI29_00223 PF03641 Possible lysine decarboxylase CBI29_00224 PF00571 CBS domain CBI29_00224 PF03471 Transporter associated domain CBI29_00224 PF03741 CBI29_00224 CBI29_00225 PF02810 SEC-C motif CBI29_00226 PF03458 CBI29_00226 CBI29_00227 PF00083 Sugar (and other) transporter CBI29_00228 PF00521 DNA gyrase/topoisomerase IV, subunit A CBI29_00228 PF03989 DNA gyrase C-terminal domain, beta-propeller CBI29_00229 PF00501 AMP-binding enzyme CBI29_00229 PF13193 AMP-binding enzyme C-terminal domain CBI29_00231 PF01124 MAPEG family CBI29_00232 PF00719 Inorganic pyrophosphatase CBI29_00233 PF03573 outer membrane porin, OprD family CBI29_00235 PF09694 CBI29_00235 CBI29_00236 PF00701 Dihydrodipicolinate synthetase family CBI29_00237 PF00596 Class II Aldolase and Adducin N-terminal domain CBI29_00238 PF00155 Aminotransferase class I and II CBI29_00238 PF00392 Bacterial regulatory proteins, gntR family CBI29_00239 PF01078 Magnesium chelatase, subunit ChlI CBI29_00239 PF13541 Subunit ChlI of Mg-chelatase CBI29_00240 PF08721 TnsA endonuclease C terminal CBI29_00240 PF08722 TnsA endonuclease N terminal CBI29_00241 PF00665 Integrase core domain CBI29_00241 PF09299 Mu transposase, C-terminal CBI29_00242 PF05621 CBI29_00242 CBI29_00243 PF06527 CBI29_00243 CBI29_00245 PF13738 Pyridine nucleotide-disulphide oxidoreductase CBI29_00246 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_00247 PF03358 NADPH-dependent FMN reductase CBI29_00248 PF01758 Sodium Bile acid symporter family CBI29_00249 PF01451 Low molecular weight phosphotyrosine protein phosphatase CBI29_00250 PF01022 Bacterial regulatory protein, arsR family CBI29_00251 PF03960 ArsC family CBI29_00252 PF02411 CBI29_00252 CBI29_00253 PF13411 MerR HTH family regulatory protein CBI29_00254 PF01545 Cation efflux family CBI29_00255 PF01252 CBI29_00255 CBI29_00256 PF01610 CBI29_00256 CBI29_00256 PF13542 CBI29_00256 CBI29_00256 PF14690 CBI29_00256 CBI29_00258 PF01131 DNA topoisomerase CBI29_00258 PF01396 CBI29_00258 CBI29_00258 PF01751 Toprim domain CBI29_00259 PF00436 Single-strand binding protein family CBI29_00261 PF00809 Pterin binding enzyme CBI29_00264 PF13610 CBI29_00264 CBI29_00265 PF11809 CBI29_00265 CBI29_00266 PF13411 MerR HTH family regulatory protein CBI29_00267 PF00403 Heavy-metal-associated domain CBI29_00267 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CBI29_00267 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_00268 PF03203 CBI29_00268 CBI29_00269 PF00403 Heavy-metal-associated domain CBI29_00270 PF00376 MerR family regulatory protein CBI29_00270 PF09278 MerR, DNA binding CBI29_00271 PF00440 Bacterial regulatory proteins, tetR family CBI29_00271 PF02909 Tetracyclin repressor, C-terminal all-alpha domain CBI29_00272 PF07690 Major Facilitator Superfamily CBI29_00273 PF00892 EamA-like transporter family CBI29_00275 PF00302 Chloramphenicol acetyltransferase CBI29_00276 PF03400 CBI29_00276 CBI29_00277 PF01526 CBI29_00277 CBI29_00277 PF13700 CBI29_00277 CBI29_00278 PF00239 Resolvase, N terminal domain CBI29_00278 PF02796 Helix-turn-helix domain of resolvase CBI29_00279 PF13354 Beta-lactamase enzyme family CBI29_00280 PF01526 CBI29_00280 CBI29_00280 PF13700 CBI29_00280 CBI29_00281 PF00239 Resolvase, N terminal domain CBI29_00282 PF13610 CBI29_00282 CBI29_00283 PF01636 Phosphotransferase enzyme family CBI29_00284 PF13610 CBI29_00284 CBI29_00285 PF00589 Phage integrase family CBI29_00285 PF13495 Phage integrase, N-terminal SAM-like domain CBI29_00286 PF00583 Acetyltransferase (GNAT) family CBI29_00287 PF13673 Acetyltransferase (GNAT) domain CBI29_00288 PF01909 Nucleotidyltransferase domain CBI29_00288 PF13427 CBI29_00288 CBI29_00289 PF00893 Small Multidrug Resistance protein CBI29_00291 PF00583 Acetyltransferase (GNAT) family CBI29_00293 PF00239 Resolvase, N terminal domain CBI29_00294 PF03743 Bacterial conjugation TrbI-like protein CBI29_00295 PF13411 MerR HTH family regulatory protein CBI29_00296 PF01545 Cation efflux family CBI29_00297 PF01252 CBI29_00297 CBI29_00299 PF13610 CBI29_00299 CBI29_00300 PF00916 CBI29_00300 CBI29_00300 PF01740 STAS domain CBI29_00302 PF00582 Universal stress protein family CBI29_00303 PF04380 CBI29_00303 CBI29_00304 PF00543 Nitrogen regulatory protein P-II CBI29_00305 PF00909 Ammonium Transporter Family CBI29_00306 PF03477 ATP cone domain CBI29_00307 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CBI29_00307 PF01872 RibD C-terminal domain CBI29_00308 PF02086 D12 class N6 adenine-specific DNA methyltransferase CBI29_00309 PF00677 Lumazine binding domain CBI29_00312 PF04364 DNA polymerase III chi subunit, HolC CBI29_00313 PF00883 Cytosol aminopeptidase family, catalytic domain CBI29_00313 PF02789 Cytosol aminopeptidase family, N-terminal domain CBI29_00314 PF03739 CBI29_00314 CBI29_00315 PF03739 CBI29_00315 CBI29_00316 PF01676 Metalloenzyme superfamily CBI29_00316 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CBI29_00317 PF03572 Peptidase family S41 CBI29_00318 PF00072 Response regulator receiver domain CBI29_00318 PF00158 Sigma-54 interaction domain CBI29_00318 PF02954 Bacterial regulatory protein, Fis family CBI29_00319 PF00512 His Kinase A (phospho-acceptor) domain CBI29_00319 PF00989 PAS fold CBI29_00319 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_00320 PF00072 Response regulator receiver domain CBI29_00320 PF00196 Bacterial regulatory proteins, luxR family CBI29_00321 PF00768 D-alanyl-D-alanine carboxypeptidase CBI29_00322 PF00291 Pyridoxal-phosphate dependent enzyme CBI29_00323 PF00742 Homoserine dehydrogenase CBI29_00323 PF01842 ACT domain CBI29_00323 PF03447 Homoserine dehydrogenase, NAD binding domain CBI29_00324 PF10411 Disulfide bond isomerase protein N-terminus CBI29_00324 PF13098 Thioredoxin-like domain CBI29_00325 PF00589 Phage integrase family CBI29_00325 PF02899 Phage integrase, N-terminal SAM-like domain CBI29_00326 PF04023 FeoA domain CBI29_00327 PF02421 Ferrous iron transport protein B CBI29_00327 PF07664 CBI29_00327 CBI29_00327 PF07670 Nucleoside recognition CBI29_00329 PF02875 Mur ligase family, glutamate ligase domain CBI29_00329 PF08245 Mur ligase middle domain CBI29_00330 PF01098 CBI29_00330 CBI29_00331 PF00749 tRNA synthetases class I (E and Q), catalytic domain CBI29_00332 PF01258 Prokaryotic dksA/traR C4-type zinc finger CBI29_00333 PF00149 Calcineurin-like phosphoesterase CBI29_00334 PF00293 NUDIX domain CBI29_00335 PF01964 ThiC family CBI29_00335 PF13667 ThiC-associated domain CBI29_00337 PF00440 Bacterial regulatory proteins, tetR family CBI29_00338 PF00892 EamA-like transporter family CBI29_00339 PF02321 Outer membrane efflux protein CBI29_00340 PF01895 PhoU domain CBI29_00341 PF04362 Bacterial Fe(2+) trafficking CBI29_00342 PF00206 Lyase CBI29_00342 PF14698 Argininosuccinate lyase C-terminal CBI29_00343 PF06580 CBI29_00343 CBI29_00344 PF00072 Response regulator receiver domain CBI29_00344 PF04397 LytTr DNA-binding domain CBI29_00345 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CBI29_00345 PF03900 Porphobilinogen deaminase, C-terminal domain CBI29_00346 PF02602 Uroporphyrinogen-III synthase HemD CBI29_00349 PF13279 Thioesterase-like superfamily CBI29_00350 PF00816 H-NS histone family CBI29_00351 PF01203 CBI29_00351 CBI29_00352 PF11356 Type IV pilus biogenesis CBI29_00353 PF00263 CBI29_00353 CBI29_00353 PF03958 Bacterial type II/III secretion system short domain CBI29_00354 PF00498 FHA domain CBI29_00355 PF13419 Haloacid dehalogenase-like hydrolase CBI29_00356 PF00425 chorismate binding enzyme CBI29_00356 PF04715 Anthranilate synthase component I, N terminal region CBI29_00361 PF00009 Elongation factor Tu GTP binding domain CBI29_00361 PF03143 Elongation factor Tu C-terminal domain CBI29_00361 PF03144 Elongation factor Tu domain 2 CBI29_00363 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CBI29_00364 PF02357 Transcription termination factor nusG CBI29_00365 PF00298 Ribosomal protein L11, RNA binding domain CBI29_00365 PF03946 Ribosomal protein L11, N-terminal domain CBI29_00366 PF00687 Ribosomal protein L1p/L10e family CBI29_00367 PF00466 Ribosomal protein L10 CBI29_00368 PF00542 Ribosomal protein L7/L12 C-terminal domain CBI29_00368 PF16320 CBI29_00368 CBI29_00369 PF00562 RNA polymerase Rpb2, domain 6 CBI29_00369 PF04560 RNA polymerase Rpb2, domain 7 CBI29_00369 PF04561 RNA polymerase Rpb2, domain 2 CBI29_00369 PF04563 RNA polymerase beta subunit CBI29_00369 PF04565 RNA polymerase Rpb2, domain 3 CBI29_00369 PF10385 RNA polymerase beta subunit external 1 domain CBI29_00370 PF00623 RNA polymerase Rpb1, domain 2 CBI29_00370 PF04983 RNA polymerase Rpb1, domain 3 CBI29_00370 PF04997 RNA polymerase Rpb1, domain 1 CBI29_00370 PF04998 RNA polymerase Rpb1, domain 5 CBI29_00370 PF05000 RNA polymerase Rpb1, domain 4 CBI29_00372 PF13441 CBI29_00372 CBI29_00373 PF14539 Domain of unknown function (DUF4442) CBI29_00374 PF00561 alpha/beta hydrolase fold CBI29_00375 PF03553 CBI29_00375 CBI29_00375 PF13726 CBI29_00375 CBI29_00376 PF03922 OmpW family CBI29_00377 PF07007 Protein of unknown function (DUF1311) CBI29_00378 PF00183 Hsp90 protein CBI29_00378 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_00381 PF01323 DSBA-like thioredoxin domain CBI29_00383 PF13411 MerR HTH family regulatory protein CBI29_00384 PF06821 Serine hydrolase CBI29_00386 PF00108 Thiolase, N-terminal domain CBI29_00386 PF02803 Thiolase, C-terminal domain CBI29_00387 PF00378 Enoyl-CoA hydratase/isomerase family CBI29_00387 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CBI29_00387 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CBI29_00389 PF05118 Aspartyl/Asparaginyl beta-hydroxylase CBI29_00391 PF01541 GIY-YIG catalytic domain CBI29_00391 PF02151 UvrB/uvrC motif CBI29_00391 PF08459 UvrC Helix-hairpin-helix N-terminal CBI29_00391 PF14520 Helix-hairpin-helix domain CBI29_00392 PF13622 Thioesterase-like superfamily CBI29_00393 PF01066 CDP-alcohol phosphatidyltransferase CBI29_00394 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CBI29_00394 PF12833 Helix-turn-helix domain CBI29_00395 PF13532 2OG-Fe(II) oxygenase superfamily CBI29_00396 PF01614 Bacterial transcriptional regulator CBI29_00397 PF04632 CBI29_00397 CBI29_00398 PF07869 CBI29_00398 CBI29_00399 PF13437 HlyD family secretion protein CBI29_00399 PF13533 Biotin-lipoyl like CBI29_00400 PF03652 Uncharacterised protein family (UPF0081) CBI29_00401 PF02622 Uncharacterized ACR, COG1678 CBI29_00402 PF02463 RecF/RecN/SMC N terminal domain CBI29_00404 PF06865 Protein of unknown function (DUF1255) CBI29_00405 PF00588 SpoU rRNA Methylase family CBI29_00405 PF08032 RNA 2'-O ribose methyltransferase substrate binding CBI29_00406 PF00892 EamA-like transporter family CBI29_00407 PF01121 Dephospho-CoA kinase CBI29_00408 PF01478 Type IV leader peptidase family CBI29_00408 PF06750 CBI29_00408 CBI29_00409 PF00482 Type II secretion system (T2SS), protein F CBI29_00410 PF00437 Type II/IV secretion system protein CBI29_00410 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CBI29_00411 PF00121 Triosephosphate isomerase CBI29_00412 PF03840 Preprotein translocase SecG subunit CBI29_00416 PF02576 Uncharacterised BCR, YhbC family COG0779 CBI29_00416 PF17384 CBI29_00416 CBI29_00417 PF08529 NusA N-terminal domain CBI29_00417 PF13184 NusA-like KH domain CBI29_00417 PF14520 Helix-hairpin-helix domain CBI29_00418 PF00009 Elongation factor Tu GTP binding domain CBI29_00418 PF04760 Translation initiation factor IF-2, N-terminal region CBI29_00418 PF08364 CBI29_00418 CBI29_00418 PF11987 Translation-initiation factor 2 CBI29_00419 PF02033 Ribosome-binding factor A CBI29_00420 PF03334 CBI29_00420 CBI29_00421 PF04066 CBI29_00421 CBI29_00422 PF01899 CBI29_00422 CBI29_00423 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CBI29_00424 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CBI29_00425 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CBI29_00425 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CBI29_00425 PF04039 CBI29_00425 CBI29_00425 PF13244 CBI29_00425 CBI29_00426 PF13476 AAA domain CBI29_00427 PF13245 Part of AAA domain CBI29_00427 PF13361 UvrD-like helicase C-terminal domain CBI29_00428 PF01502 Phosphoribosyl-AMP cyclohydrolase CBI29_00428 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CBI29_00429 PF01494 FAD binding domain CBI29_00430 PF03109 CBI29_00430 CBI29_00432 PF01209 ubiE/COQ5 methyltransferase family CBI29_00434 PF03976 Polyphosphate kinase 2 (PPK2) CBI29_00436 PF04257 Exodeoxyribonuclease V, gamma subunit CBI29_00437 PF00580 UvrD/REP helicase N-terminal domain CBI29_00437 PF12705 PD-(D/E)XK nuclease superfamily CBI29_00437 PF13361 UvrD-like helicase C-terminal domain CBI29_00438 PF13538 UvrD-like helicase C-terminal domain CBI29_00438 PF13604 AAA domain CBI29_00439 PF00144 Beta-lactamase CBI29_00440 PF00312 Ribosomal protein S15 CBI29_00441 PF00013 KH domain CBI29_00441 PF00575 S1 RNA binding domain CBI29_00441 PF01138 3' exoribonuclease family, domain 1 CBI29_00441 PF03725 3' exoribonuclease family, domain 2 CBI29_00441 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CBI29_00442 PF01544 CorA-like Mg2+ transporter protein CBI29_00443 PF13591 MerR HTH family regulatory protein CBI29_00444 PF00226 DnaJ domain CBI29_00444 PF01556 DnaJ C terminal domain CBI29_00445 PF01810 CBI29_00445 CBI29_00446 PF01430 Hsp33 protein CBI29_00447 PF00999 Sodium/hydrogen exchanger family CBI29_00447 PF02254 TrkA-N domain CBI29_00448 PF00271 Helicase conserved C-terminal domain CBI29_00448 PF04851 Type III restriction enzyme, res subunit CBI29_00449 PF00482 Type II secretion system (T2SS), protein F CBI29_00450 PF07963 Prokaryotic N-terminal methylation motif CBI29_00450 PF08334 Type II secretion system (T2SS), protein G CBI29_00452 PF01588 Putative tRNA binding domain CBI29_00453 PF00795 Carbon-nitrogen hydrolase CBI29_00454 PF00571 CBS domain CBI29_00454 PF03471 Transporter associated domain CBI29_00455 PF01206 Sulfurtransferase TusA CBI29_00457 PF01946 Thi4 family CBI29_00457 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase CBI29_00458 PF06938 Protein of unknown function (DUF1285) CBI29_00459 PF01177 Asp/Glu/Hydantoin racemase CBI29_00460 PF13271 CBI29_00460 CBI29_00461 PF00762 Ferrochelatase CBI29_00462 PF00753 Metallo-beta-lactamase superfamily CBI29_00463 PF03884 Domain of unknown function (DUF329) CBI29_00464 PF02390 Putative methyltransferase CBI29_00465 PF03486 HI0933-like protein CBI29_00466 PF04828 Glutathione-dependent formaldehyde-activating enzyme CBI29_00467 PF02537 CBI29_00467 CBI29_00468 PF08888 HopJ type III effector protein CBI29_00469 PF01197 Ribosomal protein L31 CBI29_00470 PF03109 CBI29_00470 CBI29_00471 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_00471 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_00471 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CBI29_00472 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CBI29_00473 PF01554 MatE CBI29_00474 PF04657 CBI29_00474 CBI29_00475 PF04055 Radical SAM superfamily CBI29_00475 PF06969 HemN C-terminal domain CBI29_00476 PF13561 Enoyl-(Acyl carrier protein) reductase CBI29_00477 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_00477 PF03466 LysR substrate binding domain CBI29_00480 PF00501 AMP-binding enzyme CBI29_00480 PF13193 AMP-binding enzyme C-terminal domain CBI29_00481 PF00575 S1 RNA binding domain CBI29_00481 PF10150 Ribonuclease E/G family CBI29_00482 PF00849 RNA pseudouridylate synthase CBI29_00482 PF01479 S4 domain CBI29_00483 PF13419 Haloacid dehalogenase-like hydrolase CBI29_00484 PF08279 HTH domain CBI29_00484 PF13280 CBI29_00484 CBI29_00485 PF02798 Glutathione S-transferase, N-terminal domain CBI29_00485 PF14497 Glutathione S-transferase, C-terminal domain CBI29_00486 PF07077 CBI29_00486 CBI29_00487 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_00487 PF03466 LysR substrate binding domain CBI29_00488 PF12706 Beta-lactamase superfamily domain CBI29_00489 PF00141 Peroxidase CBI29_00490 PF00391 PEP-utilising enzyme, mobile domain CBI29_00490 PF02896 PEP-utilising enzyme, TIM barrel domain CBI29_00490 PF05524 PEP-utilising enzyme, N-terminal CBI29_00490 PF13185 GAF domain CBI29_00491 PF00293 NUDIX domain CBI29_00492 PF12710 haloacid dehalogenase-like hydrolase CBI29_00493 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_00493 PF03466 LysR substrate binding domain CBI29_00494 PF09834 CBI29_00494 CBI29_00495 PF00330 Aconitase family (aconitate hydratase) CBI29_00496 PF00694 Aconitase C-terminal domain CBI29_00498 PF00180 Isocitrate/isopropylmalate dehydrogenase CBI29_00500 PF07007 Protein of unknown function (DUF1311) CBI29_00501 PF01176 Translation initiation factor 1A / IF-1 CBI29_00502 PF12625 CBI29_00502 CBI29_00502 PF12833 Helix-turn-helix domain CBI29_00503 PF01416 tRNA pseudouridine synthase CBI29_00504 PF00710 Asparaginase CBI29_00507 PF01118 Semialdehyde dehydrogenase, NAD binding domain CBI29_00507 PF02774 Semialdehyde dehydrogenase, dimerisation domain CBI29_00508 PF03372 Endonuclease/Exonuclease/phosphatase family CBI29_00509 PF00375 Sodium:dicarboxylate symporter family CBI29_00510 PF00534 Glycosyl transferases group 1 CBI29_00510 PF13439 Glycosyltransferase Family 4 CBI29_00511 PF03279 CBI29_00511 CBI29_00512 PF01810 CBI29_00512 CBI29_00513 PF00005 ABC transporter CBI29_00513 PF12848 ABC transporter CBI29_00513 PF16326 CBI29_00513 CBI29_00514 PF04102 SlyX CBI29_00515 PF08240 Alcohol dehydrogenase GroES-like domain CBI29_00515 PF13602 Zinc-binding dehydrogenase CBI29_00516 PF01638 HxlR-like helix-turn-helix CBI29_00518 PF01131 DNA topoisomerase CBI29_00518 PF01396 CBI29_00518 CBI29_00518 PF01751 Toprim domain CBI29_00518 PF08272 Topoisomerase I zinc-ribbon-like CBI29_00520 PF03729 CBI29_00520 CBI29_00521 PF00580 UvrD/REP helicase N-terminal domain CBI29_00521 PF13361 UvrD-like helicase C-terminal domain CBI29_00522 PF00076 RNA recognition motif CBI29_00523 PF04266 ASCH domain CBI29_00526 PF00999 Sodium/hydrogen exchanger family CBI29_00526 PF02254 TrkA-N domain CBI29_00527 PF00471 Ribosomal protein L33 CBI29_00528 PF00830 Ribosomal L28 family CBI29_00529 PF00171 Aldehyde dehydrogenase family CBI29_00530 PF00440 Bacterial regulatory proteins, tetR family CBI29_00530 PF13972 Bacterial transcriptional repressor CBI29_00531 PF00551 Formyl transferase CBI29_00531 PF01842 ACT domain CBI29_00532 PF03544 Gram-negative bacterial TonB protein C-terminal CBI29_00533 PF01618 CBI29_00533 CBI29_00534 PF02472 Biopolymer transport protein ExbD/TolR CBI29_00535 PF01625 Peptide methionine sulfoxide reductase CBI29_00536 PF13387 CBI29_00536 CBI29_00537 PF00186 Dihydrofolate reductase CBI29_00538 PF00303 Thymidylate synthase CBI29_00541 PF01790 CBI29_00541 CBI29_00542 PF05742 CBI29_00542 CBI29_00543 PF05787 Bacterial protein of unknown function (DUF839) CBI29_00544 PF05787 Bacterial protein of unknown function (DUF839) CBI29_00545 PF00902 Sec-independent protein translocase protein (TatC) CBI29_00546 PF02416 mttA/Hcf106 family CBI29_00547 PF02416 mttA/Hcf106 family CBI29_00549 PF01725 Ham1 family CBI29_00550 PF08238 Sel1 repeat CBI29_00551 PF07021 Methionine biosynthesis protein MetW CBI29_00552 PF00561 alpha/beta hydrolase fold CBI29_00553 PF00682 HMGL-like CBI29_00553 PF08502 LeuA allosteric (dimerisation) domain CBI29_00554 PF13640 2OG-Fe(II) oxygenase superfamily CBI29_00555 PF00593 TonB dependent receptor CBI29_00555 PF07715 TonB-dependent Receptor Plug Domain CBI29_00556 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CBI29_00556 PF05697 Bacterial trigger factor protein (TF) CBI29_00556 PF05698 Bacterial trigger factor protein (TF) C-terminus CBI29_00557 PF00574 Clp protease CBI29_00558 PF06689 ClpX C4-type zinc finger CBI29_00558 PF07724 AAA domain (Cdc48 subfamily) CBI29_00558 PF10431 C-terminal, D2-small domain, of ClpB protein CBI29_00559 PF11008 CBI29_00559 CBI29_00560 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) CBI29_00561 PF05681 CBI29_00561 CBI29_00561 PF05683 Fumarase C-terminus CBI29_00562 PF01515 Phosphate acetyl/butaryl transferase CBI29_00562 PF07085 DRTGG domain CBI29_00562 PF13500 AAA domain CBI29_00563 PF00871 Acetokinase family CBI29_00564 PF00920 Dehydratase family CBI29_00565 PF01081 KDPG and KHG aldolase CBI29_00566 PF02447 CBI29_00566 CBI29_00567 PF01202 Shikimate kinase CBI29_00568 PF00171 Aldehyde dehydrogenase family CBI29_00569 PF00171 Aldehyde dehydrogenase family CBI29_00570 PF00561 alpha/beta hydrolase fold CBI29_00571 PF04072 Leucine carboxyl methyltransferase CBI29_00572 PF00933 Glycosyl hydrolase family 3 N terminal domain CBI29_00573 PF00595 PDZ domain (Also known as DHR or GLGF) CBI29_00573 PF03572 Peptidase family S41 CBI29_00573 PF11818 CBI29_00573 CBI29_00574 PF00534 Glycosyl transferases group 1 CBI29_00574 PF13439 Glycosyltransferase Family 4 CBI29_00575 PF01569 PAP2 superfamily CBI29_00576 PF04384 Iron-sulphur cluster assembly CBI29_00577 PF00334 Nucleoside diphosphate kinase CBI29_00578 PF04055 Radical SAM superfamily CBI29_00579 PF13432 Tetratricopeptide repeat CBI29_00580 PF13413 Helix-turn-helix domain CBI29_00580 PF13464 CBI29_00580 CBI29_00581 PF04551 GcpE protein CBI29_00582 PF03129 Anticodon binding domain CBI29_00582 PF13393 Histidyl-tRNA synthetase CBI29_00583 PF09976 Tetratricopeptide repeat CBI29_00584 PF13360 PQQ-like domain CBI29_00585 PF01926 50S ribosome-binding GTPase CBI29_00585 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CBI29_00586 PF01648 4'-phosphopantetheinyl transferase superfamily CBI29_00587 PF02556 Preprotein translocase subunit SecB CBI29_00588 PF00462 Glutaredoxin CBI29_00589 PF00581 Rhodanese-like domain CBI29_00590 PF03193 Protein of unknown function, DUF258 CBI29_00591 PF00929 Exonuclease CBI29_00592 PF12811 CBI29_00592 CBI29_00593 PF13561 Enoyl-(Acyl carrier protein) reductase CBI29_00594 PF02321 Outer membrane efflux protein CBI29_00595 PF00005 ABC transporter CBI29_00595 PF02687 CBI29_00595 CBI29_00595 PF12704 MacB-like periplasmic core domain CBI29_00596 PF16576 CBI29_00596 CBI29_00597 PF06144 DNA polymerase III, delta subunit CBI29_00599 PF00133 tRNA synthetases class I (I, L, M and V) CBI29_00599 PF08264 Anticodon-binding domain of tRNA CBI29_00599 PF09334 tRNA synthetases class I (M) CBI29_00599 PF13603 Leucyl-tRNA synthetase, Domain 2 CBI29_00600 PF13511 CBI29_00600 CBI29_00601 PF00205 Thiamine pyrophosphate enzyme, central domain CBI29_00601 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CBI29_00601 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CBI29_00602 PF10369 Small subunit of acetolactate synthase CBI29_00602 PF13710 ACT domain CBI29_00603 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CBI29_00603 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain CBI29_00604 PF00563 EAL domain CBI29_00604 PF00990 GGDEF domain CBI29_00605 PF00440 Bacterial regulatory proteins, tetR family CBI29_00606 PF00440 Bacterial regulatory proteins, tetR family CBI29_00608 PF00009 Elongation factor Tu GTP binding domain CBI29_00608 PF16658 CBI29_00608 CBI29_00610 PF11738 Protein of unknown function (DUF3298) CBI29_00611 PF01026 TatD related DNase CBI29_00612 PF00330 Aconitase family (aconitate hydratase) CBI29_00612 PF00694 Aconitase C-terminal domain CBI29_00613 PF00899 ThiF family CBI29_00614 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_00614 PF03466 LysR substrate binding domain CBI29_00616 PF01207 Dihydrouridine synthase (Dus) CBI29_00617 PF00589 Phage integrase family CBI29_00618 PF11112 CBI29_00618 CBI29_00620 PF11726 CBI29_00620 CBI29_00629 PF06067 CBI29_00629 CBI29_00630 PF05425 CBI29_00630 CBI29_00631 PF04234 CopC domain CBI29_00632 PF00122 E1-E2 ATPase CBI29_00632 PF00702 haloacid dehalogenase-like hydrolase CBI29_00632 PF04945 YHS domain CBI29_00633 PF00512 His Kinase A (phospho-acceptor) domain CBI29_00633 PF00672 HAMP domain CBI29_00633 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_00634 PF00072 Response regulator receiver domain CBI29_00634 PF00486 Transcriptional regulatory protein, C terminal CBI29_00636 PF00394 Multicopper oxidase CBI29_00636 PF07731 Multicopper oxidase CBI29_00636 PF07732 Multicopper oxidase CBI29_00637 PF05275 CBI29_00637 CBI29_00638 PF01381 Helix-turn-helix CBI29_00638 PF06114 Domain of unknown function (DUF955) CBI29_00640 PF07690 Major Facilitator Superfamily CBI29_00641 PF01042 Endoribonuclease L-PSP CBI29_00642 PF00892 EamA-like transporter family CBI29_00643 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CBI29_00643 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CBI29_00644 PF12769 Domain of unknown function (DUF3814) CBI29_00645 PF02233 NAD(P) transhydrogenase beta subunit CBI29_00646 PF00106 short chain dehydrogenase CBI29_00647 PF02410 Oligomerisation domain CBI29_00648 PF01261 Xylose isomerase-like TIM barrel CBI29_00649 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CBI29_00649 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CBI29_00650 PF00378 Enoyl-CoA hydratase/isomerase family CBI29_00651 PF00072 Response regulator receiver domain CBI29_00651 PF00512 His Kinase A (phospho-acceptor) domain CBI29_00651 PF01627 Hpt domain CBI29_00651 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_00652 PF00291 Pyridoxal-phosphate dependent enzyme CBI29_00653 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB CBI29_00654 PF05958 tRNA (Uracil-5-)-methyltransferase CBI29_00655 PF02824 TGS domain CBI29_00655 PF04607 Region found in RelA / SpoT proteins CBI29_00655 PF13291 ACT domain CBI29_00655 PF13328 HD domain CBI29_00656 PF00106 short chain dehydrogenase CBI29_00657 PF03819 MazG nucleotide pyrophosphohydrolase domain CBI29_00658 PF12836 Helix-hairpin-helix motif CBI29_00659 PF01743 Poly A polymerase head domain CBI29_00659 PF12626 Polymerase A arginine-rich C-terminus CBI29_00659 PF12627 Probable RNA and SrmB- binding site of polymerase A CBI29_00660 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CBI29_00661 PF02548 Ketopantoate hydroxymethyltransferase CBI29_00662 PF02569 Pantoate-beta-alanine ligase CBI29_00663 PF03668 CBI29_00663 CBI29_00664 PF00381 PTS HPr component phosphorylation site CBI29_00665 PF04751 Protein of unknown function (DUF615) CBI29_00666 PF00501 AMP-binding enzyme CBI29_00666 PF13193 AMP-binding enzyme C-terminal domain CBI29_00667 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CBI29_00667 PF02824 TGS domain CBI29_00667 PF03129 Anticodon binding domain CBI29_00667 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CBI29_00668 PF00707 Translation initiation factor IF-3, C-terminal domain CBI29_00669 PF00043 Glutathione S-transferase, C-terminal domain CBI29_00669 PF02798 Glutathione S-transferase, N-terminal domain CBI29_00670 PF09335 CBI29_00670 CBI29_00671 PF05977 Transmembrane secretion effector CBI29_00672 PF01632 Ribosomal protein L35 CBI29_00673 PF00453 Ribosomal protein L20 CBI29_00676 PF01409 tRNA synthetases class II core domain (F) CBI29_00676 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CBI29_00677 PF01588 Putative tRNA binding domain CBI29_00677 PF03147 Ferredoxin-fold anticodon binding domain CBI29_00677 PF03483 B3/4 domain CBI29_00677 PF03484 tRNA synthetase B5 domain CBI29_00678 PF00216 Bacterial DNA-binding protein CBI29_00680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CBI29_00680 PF07497 Rho termination factor, RNA-binding domain CBI29_00680 PF07498 Rho termination factor, N-terminal domain CBI29_00681 PF00085 Thioredoxin CBI29_00682 PF01966 HD domain CBI29_00682 PF02541 Ppx/GppA phosphatase family CBI29_00683 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CBI29_00684 PF01171 PP-loop family CBI29_00684 PF09179 TilS substrate binding domain CBI29_00684 PF11734 TilS substrate C-terminal domain CBI29_00685 PF03807 NADP oxidoreductase coenzyme F420-dependent CBI29_00685 PF14748 Pyrroline-5-carboxylate reductase dimerisation CBI29_00686 PF02325 CBI29_00686 CBI29_00687 PF00476 DNA polymerase family A CBI29_00687 PF01367 5'-3' exonuclease, C-terminal SAM fold CBI29_00687 PF01612 3'-5' exonuclease CBI29_00687 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CBI29_00688 PF10101 CBI29_00688 CBI29_00689 PF00924 Mechanosensitive ion channel CBI29_00691 PF00437 Type II/IV secretion system protein CBI29_00692 PF02566 OsmC-like protein CBI29_00693 PF01047 MarR family CBI29_00694 PF16309 CBI29_00694 CBI29_00695 PF00795 Carbon-nitrogen hydrolase CBI29_00696 PF01740 STAS domain CBI29_00697 PF07228 Stage II sporulation protein E (SpoIIE) CBI29_00698 PF04333 CBI29_00698 CBI29_00701 PF00309 CBI29_00701 CBI29_00701 PF04552 Sigma-54, DNA binding domain CBI29_00701 PF04963 Sigma-54 factor, core binding domain CBI29_00702 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CBI29_00703 PF01722 BolA-like protein CBI29_00704 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CBI29_00705 PF01634 ATP phosphoribosyltransferase CBI29_00706 PF00815 Histidinol dehydrogenase CBI29_00707 PF00155 Aminotransferase class I and II CBI29_00708 PF00425 chorismate binding enzyme CBI29_00708 PF04715 Anthranilate synthase component I, N terminal region CBI29_00710 PF03412 Peptidase C39 family CBI29_00712 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CBI29_00715 PF00293 NUDIX domain CBI29_00715 PF14803 Nudix N-terminal CBI29_00716 PF00293 NUDIX domain CBI29_00717 PF00132 Bacterial transferase hexapeptide (six repeats) CBI29_00718 PF00814 Glycoprotease family CBI29_00719 PF04445 Putative SAM-dependent methyltransferase CBI29_00720 PF01650 Peptidase C13 family CBI29_00721 PF00756 Putative esterase CBI29_00722 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) CBI29_00723 PF00834 Ribulose-phosphate 3 epimerase family CBI29_00724 PF08282 haloacid dehalogenase-like hydrolase CBI29_00726 PF00394 Multicopper oxidase CBI29_00726 PF07731 Multicopper oxidase CBI29_00726 PF07732 Multicopper oxidase CBI29_00727 PF05275 CBI29_00727 CBI29_00728 PF01545 Cation efflux family CBI29_00729 PF00893 Small Multidrug Resistance protein CBI29_00730 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CBI29_00730 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CBI29_00731 PF01960 ArgJ family CBI29_00732 PF02445 Quinolinate synthetase A protein CBI29_00737 PF00962 Adenosine/AMP deaminase CBI29_00738 PF00107 Zinc-binding dehydrogenase CBI29_00738 PF08240 Alcohol dehydrogenase GroES-like domain CBI29_00739 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_00739 PF03466 LysR substrate binding domain CBI29_00740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_00740 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_00740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_00741 PF07690 Major Facilitator Superfamily CBI29_00742 PF02515 CoA-transferase family III CBI29_00744 PF00890 FAD binding domain CBI29_00745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_00745 PF03466 LysR substrate binding domain CBI29_00746 PF13531 Bacterial extracellular solute-binding protein CBI29_00747 PF07690 Major Facilitator Superfamily CBI29_00748 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_00748 PF03466 LysR substrate binding domain CBI29_00750 PF01546 Peptidase family M20/M25/M40 CBI29_00750 PF07687 Peptidase dimerisation domain CBI29_00751 PF12625 CBI29_00751 CBI29_00751 PF12833 Helix-turn-helix domain CBI29_00753 PF01810 CBI29_00753 CBI29_00754 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_00754 PF03466 LysR substrate binding domain CBI29_00755 PF08908 CBI29_00755 CBI29_00756 PF01717 Cobalamin-independent synthase, Catalytic domain CBI29_00757 PF01613 Flavin reductase like domain CBI29_00758 PF00440 Bacterial regulatory proteins, tetR family CBI29_00763 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_00763 PF03466 LysR substrate binding domain CBI29_00764 PF02567 Phenazine biosynthesis-like protein CBI29_00766 PF00268 Ribonucleotide reductase, small chain CBI29_00768 PF00317 Ribonucleotide reductase, all-alpha domain CBI29_00768 PF02867 Ribonucleotide reductase, barrel domain CBI29_00768 PF03477 ATP cone domain CBI29_00769 PF00072 Response regulator receiver domain CBI29_00769 PF00486 Transcriptional regulatory protein, C terminal CBI29_00770 PF00512 His Kinase A (phospho-acceptor) domain CBI29_00770 PF00672 HAMP domain CBI29_00770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_00772 PF00990 GGDEF domain CBI29_00773 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CBI29_00774 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CBI29_00775 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CBI29_00775 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CBI29_00776 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin CBI29_00777 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CBI29_00777 PF10531 SLBB domain CBI29_00777 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CBI29_00778 PF00384 Molybdopterin oxidoreductase CBI29_00778 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CBI29_00778 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CBI29_00778 PF13510 2Fe-2S iron-sulfur cluster binding domain CBI29_00779 PF00146 NADH dehydrogenase CBI29_00780 PF12838 4Fe-4S dicluster domain CBI29_00781 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CBI29_00782 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CBI29_00783 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CBI29_00783 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CBI29_00784 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CBI29_00785 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CBI29_00786 PF14681 Uracil phosphoribosyltransferase CBI29_00787 PF00313 'Cold-shock' DNA-binding domain CBI29_00788 PF05901 CBI29_00788 CBI29_00789 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_00789 PF03466 LysR substrate binding domain CBI29_00790 PF00175 Oxidoreductase NAD-binding domain CBI29_00790 PF00970 Oxidoreductase FAD-binding domain CBI29_00793 PF05552 Conserved TM helix CBI29_00795 PF03486 HI0933-like protein CBI29_00796 PF00291 Pyridoxal-phosphate dependent enzyme CBI29_00797 PF13437 HlyD family secretion protein CBI29_00797 PF13533 Biotin-lipoyl like CBI29_00798 PF07690 Major Facilitator Superfamily CBI29_00799 PF00440 Bacterial regulatory proteins, tetR family CBI29_00800 PF01810 CBI29_00800 CBI29_00802 PF01588 Putative tRNA binding domain CBI29_00802 PF08264 Anticodon-binding domain of tRNA CBI29_00802 PF09334 tRNA synthetases class I (M) CBI29_00804 PF10609 ParA/MinD ATPase like CBI29_00805 PF01048 Phosphorylase superfamily CBI29_00806 PF09835 CBI29_00806 CBI29_00807 PF01810 CBI29_00807 CBI29_00808 PF00692 dUTPase CBI29_00814 PF01207 Dihydrouridine synthase (Dus) CBI29_00815 PF01578 CBI29_00815 CBI29_00816 PF00448 SRP54-type protein, GTPase domain CBI29_00816 PF02881 SRP54-type protein, helical bundle domain CBI29_00816 PF02978 Signal peptide binding domain CBI29_00817 PF03309 Type III pantothenate kinase CBI29_00818 PF03099 Biotin/lipoate A/B protein ligase family CBI29_00819 PF01925 CBI29_00819 CBI29_00820 PF00392 Bacterial regulatory proteins, gntR family CBI29_00820 PF07729 FCD domain CBI29_00821 PF02463 RecF/RecN/SMC N terminal domain CBI29_00822 PF04354 ZipA, C-terminal FtsZ-binding domain CBI29_00823 PF00533 BRCA1 C Terminus (BRCT) domain CBI29_00823 PF01653 NAD-dependent DNA ligase adenylation domain CBI29_00823 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CBI29_00823 PF03120 NAD-dependent DNA ligase OB-fold domain CBI29_00823 PF12826 Helix-hairpin-helix motif CBI29_00823 PF14520 Helix-hairpin-helix domain CBI29_00824 PF00210 Ferritin-like domain CBI29_00825 PF07690 Major Facilitator Superfamily CBI29_00826 PF00982 Glycosyltransferase family 20 CBI29_00827 PF02358 Trehalose-phosphatase CBI29_00828 PF12697 Alpha/beta hydrolase family CBI29_00829 PF00202 Aminotransferase class-III CBI29_00830 PF00155 Aminotransferase class I and II CBI29_00831 PF13489 Methyltransferase domain CBI29_00832 PF13500 AAA domain CBI29_00833 PF00849 RNA pseudouridylate synthase CBI29_00833 PF01479 S4 domain CBI29_00834 PF04079 Putative transcriptional regulators (Ypuh-like) CBI29_00835 PF02616 ScpA/B protein CBI29_00836 PF01300 Telomere recombination CBI29_00837 PF04315 CBI29_00837 CBI29_00838 PF02620 CBI29_00838 CBI29_00839 PF01783 Ribosomal L32p protein family CBI29_00840 PF00698 Acyl transferase domain CBI29_00841 PF13561 Enoyl-(Acyl carrier protein) reductase CBI29_00842 PF00550 Phosphopantetheine attachment site CBI29_00843 PF01476 LysM domain CBI29_00843 PF04972 BON domain CBI29_00844 PF08543 Phosphomethylpyrimidine kinase CBI29_00845 PF13419 Haloacid dehalogenase-like hydrolase CBI29_00846 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CBI29_00847 PF09925 CBI29_00847 CBI29_00847 PF14351 CBI29_00847 CBI29_00848 PF14345 CBI29_00848 CBI29_00849 PF02261 Aspartate decarboxylase CBI29_00850 PF01195 Peptidyl-tRNA hydrolase CBI29_00851 PF01386 Ribosomal L25p family CBI29_00852 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CBI29_00852 PF14572 Phosphoribosyl synthetase-associated domain CBI29_00857 PF03550 Outer membrane lipoprotein LolB CBI29_00858 PF13181 Tetratricopeptide repeat CBI29_00858 PF13432 Tetratricopeptide repeat CBI29_00858 PF14559 Tetratricopeptide repeat CBI29_00859 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CBI29_00859 PF01488 Shikimate / quinate 5-dehydrogenase CBI29_00859 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CBI29_00860 PF01807 CHC2 zinc finger CBI29_00860 PF08275 DNA primase catalytic core, N-terminal domain CBI29_00860 PF10410 DnaB-helicase binding domain of primase CBI29_00860 PF13662 Toprim domain CBI29_00861 PF13525 Outer membrane lipoprotein CBI29_00862 PF00849 RNA pseudouridylate synthase CBI29_00862 PF01479 S4 domain CBI29_00863 PF02578 Multi-copper polyphenol oxidoreductase laccase CBI29_00864 PF03358 NADPH-dependent FMN reductase CBI29_00865 PF01668 SmpB protein CBI29_00866 PF01467 Cytidylyltransferase CBI29_00867 PF00037 4Fe-4S binding domain CBI29_00869 PF07396 Phosphate-selective porin O and P CBI29_00870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_00870 PF03466 LysR substrate binding domain CBI29_00871 PF00180 Isocitrate/isopropylmalate dehydrogenase CBI29_00872 PF02028 BCCT family transporter CBI29_00873 PF07859 alpha/beta hydrolase fold CBI29_00874 PF00355 Rieske [2Fe-2S] domain CBI29_00874 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CBI29_00875 PF00171 Aldehyde dehydrogenase family CBI29_00876 PF00111 2Fe-2S iron-sulfur cluster binding domain CBI29_00876 PF00175 Oxidoreductase NAD-binding domain CBI29_00876 PF00970 Oxidoreductase FAD-binding domain CBI29_00879 PF00795 Carbon-nitrogen hydrolase CBI29_00879 PF02540 NAD synthase CBI29_00881 PF02678 Pirin CBI29_00881 PF05726 Pirin C-terminal cupin domain CBI29_00882 PF03653 CBI29_00882 CBI29_00883 PF00109 Beta-ketoacyl synthase, N-terminal domain CBI29_00883 PF02801 Beta-ketoacyl synthase, C-terminal domain CBI29_00884 PF12787 CBI29_00884 CBI29_00885 PF00164 Ribosomal protein S12/S23 CBI29_00886 PF00177 Ribosomal protein S7p/S5e CBI29_00887 PF00009 Elongation factor Tu GTP binding domain CBI29_00887 PF00679 Elongation factor G C-terminus CBI29_00887 PF03144 Elongation factor Tu domain 2 CBI29_00887 PF03764 Elongation factor G, domain IV CBI29_00887 PF14492 Elongation Factor G, domain II CBI29_00888 PF00009 Elongation factor Tu GTP binding domain CBI29_00888 PF03143 Elongation factor Tu C-terminal domain CBI29_00888 PF03144 Elongation factor Tu domain 2 CBI29_00889 PF10118 CBI29_00889 CBI29_00890 PF00182 Chitinase class I CBI29_00890 PF10118 CBI29_00890 CBI29_00891 PF00583 Acetyltransferase (GNAT) family CBI29_00892 PF04376 CBI29_00892 CBI29_00892 PF04377 CBI29_00892 CBI29_00893 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CBI29_00894 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_00895 PF01580 FtsK/SpoIIIE family CBI29_00895 PF09397 Ftsk gamma domain CBI29_00895 PF13491 CBI29_00895 CBI29_00896 PF01810 CBI29_00896 CBI29_00898 PF03776 Septum formation topological specificity factor MinE CBI29_00899 PF13614 AAA domain CBI29_00900 PF03775 Septum formation inhibitor MinC, C-terminal domain CBI29_00902 PF01553 Acyltransferase CBI29_00903 PF00691 OmpA family CBI29_00904 PF00580 UvrD/REP helicase N-terminal domain CBI29_00904 PF13361 UvrD-like helicase C-terminal domain CBI29_00905 PF00692 dUTPase CBI29_00906 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CBI29_00906 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CBI29_00906 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CBI29_00907 PF00696 Amino acid kinase family CBI29_00908 PF13444 Acetyltransferase (GNAT) domain CBI29_00909 PF13230 Glutamine amidotransferases class-II CBI29_00910 PF01814 Hemerythrin HHE cation binding domain CBI29_00912 PF03658 RnfH family Ubiquitin CBI29_00913 PF04355 SmpA / OmlA family CBI29_00914 PF01475 Ferric uptake regulator family CBI29_00915 PF00437 Type II/IV secretion system protein CBI29_00916 PF00437 Type II/IV secretion system protein CBI29_00917 PF01168 Alanine racemase, N-terminal domain CBI29_00918 PF13476 AAA domain CBI29_00918 PF13558 Putative exonuclease SbcCD, C subunit CBI29_00919 PF00149 Calcineurin-like phosphoesterase CBI29_00919 PF12320 Type 5 capsule protein repressor C-terminal domain CBI29_00920 PF02566 OsmC-like protein CBI29_00923 PF01370 NAD dependent epimerase/dehydratase family CBI29_00923 PF08338 Domain of unknown function (DUF1731) CBI29_00924 PF01266 FAD dependent oxidoreductase CBI29_00925 PF00490 Delta-aminolevulinic acid dehydratase CBI29_00926 PF03061 Thioesterase superfamily CBI29_00927 PF00529 HlyD family secretion protein CBI29_00927 PF16576 CBI29_00927 CBI29_00928 PF07690 Major Facilitator Superfamily CBI29_00929 PF01019 Gamma-glutamyltranspeptidase CBI29_00931 PF00589 Phage integrase family CBI29_00931 PF13356 Domain of unknown function (DUF4102) CBI29_00934 PF14090 CBI29_00934 CBI29_00935 PF02498 CBI29_00935 CBI29_00940 PF06048 CBI29_00940 CBI29_00941 PF00436 Single-strand binding protein family CBI29_00943 PF04245 CBI29_00943 CBI29_00946 PF07693 CBI29_00946 CBI29_00948 PF06508 Queuosine biosynthesis protein QueC CBI29_00949 PF01026 TatD related DNase CBI29_00953 PF03573 outer membrane porin, OprD family CBI29_00954 PF00083 Sugar (and other) transporter CBI29_00955 PF00701 Dihydrodipicolinate synthetase family CBI29_00956 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_00956 PF03466 LysR substrate binding domain CBI29_00957 PF04542 Sigma-70 region 2 CBI29_00957 PF08281 Sigma-70, region 4 CBI29_00958 PF04773 FecR protein CBI29_00958 PF16220 CBI29_00958 CBI29_00959 PF00593 TonB dependent receptor CBI29_00959 PF07660 Secretin and TonB N terminus short domain CBI29_00959 PF07715 TonB-dependent Receptor Plug Domain CBI29_00960 PF01298 Transferrin binding protein-like solute binding protein CBI29_00961 PF04575 CBI29_00961 CBI29_00962 PF03544 Gram-negative bacterial TonB protein C-terminal CBI29_00963 PF01126 Heme oxygenase CBI29_00964 PF04304 CBI29_00964 CBI29_00966 PF06912 CBI29_00966 CBI29_00967 PF12697 Alpha/beta hydrolase family CBI29_00968 PF13520 Amino acid permease CBI29_00969 PF02574 Homocysteine S-methyltransferase CBI29_00971 PF06039 CBI29_00971 CBI29_00972 PF00732 GMC oxidoreductase CBI29_00972 PF05199 GMC oxidoreductase CBI29_00973 PF00171 Aldehyde dehydrogenase family CBI29_00974 PF00440 Bacterial regulatory proteins, tetR family CBI29_00974 PF13977 Bacterial transcriptional repressor CBI29_00975 PF02028 BCCT family transporter CBI29_00976 PF02028 BCCT family transporter CBI29_00977 PF01914 CBI29_00977 CBI29_00978 PF03061 Thioesterase superfamily CBI29_00980 PF02492 CobW/HypB/UreG, nucleotide-binding domain CBI29_00981 PF00375 Sodium:dicarboxylate symporter family CBI29_00982 PF07152 YaeQ protein CBI29_00983 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CBI29_00984 PF01522 Polysaccharide deacetylase CBI29_00984 PF14883 Hypothetical glycosyl hydrolase family 13 CBI29_00985 PF13641 Glycosyltransferase like family 2 CBI29_00986 PF13994 CBI29_00986 CBI29_00987 PF00378 Enoyl-CoA hydratase/isomerase family CBI29_00988 PF04973 CBI29_00988 CBI29_00990 PF01614 Bacterial transcriptional regulator CBI29_00990 PF09339 IclR helix-turn-helix domain CBI29_00991 PF00355 Rieske [2Fe-2S] domain CBI29_00993 PF00355 Rieske [2Fe-2S] domain CBI29_00994 PF13561 Enoyl-(Acyl carrier protein) reductase CBI29_00995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CBI29_00996 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_00996 PF14759 Reductase C-terminal CBI29_00997 PF07690 Major Facilitator Superfamily CBI29_00998 PF07883 Cupin domain CBI29_00999 PF12697 Alpha/beta hydrolase family CBI29_01000 PF00106 short chain dehydrogenase CBI29_01001 PF01958 Domain of unknown function DUF108 CBI29_01001 PF03447 Homoserine dehydrogenase, NAD binding domain CBI29_01002 PF00171 Aldehyde dehydrogenase family CBI29_01003 PF00205 Thiamine pyrophosphate enzyme, central domain CBI29_01003 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CBI29_01003 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CBI29_01005 PF07690 Major Facilitator Superfamily CBI29_01007 PF01327 Polypeptide deformylase CBI29_01008 PF04960 Glutaminase CBI29_01009 PF12833 Helix-turn-helix domain CBI29_01010 PF07690 Major Facilitator Superfamily CBI29_01011 PF01263 Aldose 1-epimerase CBI29_01013 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01013 PF03466 LysR substrate binding domain CBI29_01014 PF13561 Enoyl-(Acyl carrier protein) reductase CBI29_01015 PF07690 Major Facilitator Superfamily CBI29_01016 PF00456 Transketolase, thiamine diphosphate binding domain CBI29_01017 PF02779 Transketolase, pyrimidine binding domain CBI29_01017 PF02780 Transketolase, C-terminal domain CBI29_01018 PF00809 Pterin binding enzyme CBI29_01018 PF02310 B12 binding domain CBI29_01018 PF02574 Homocysteine S-methyltransferase CBI29_01018 PF02607 B12 binding domain CBI29_01018 PF02965 Vitamin B12 dependent methionine synthase, activation domain CBI29_01019 PF01384 CBI29_01019 CBI29_01020 PF00291 Pyridoxal-phosphate dependent enzyme CBI29_01023 PF03781 Sulfatase-modifying factor enzyme 1 CBI29_01024 PF00884 Sulfatase CBI29_01025 PF01694 Rhomboid family CBI29_01026 PF01106 NifU-like domain CBI29_01026 PF01521 Iron-sulphur cluster biosynthesis CBI29_01027 PF00593 TonB dependent receptor CBI29_01027 PF07715 TonB-dependent Receptor Plug Domain CBI29_01029 PF12697 Alpha/beta hydrolase family CBI29_01030 PF01609 Transposase DDE domain CBI29_01031 PF01609 Transposase DDE domain CBI29_01032 PF00484 Carbonic anhydrase CBI29_01033 PF13472 GDSL-like Lipase/Acylhydrolase family CBI29_01034 PF00005 ABC transporter CBI29_01035 PF02687 CBI29_01035 CBI29_01036 PF01694 Rhomboid family CBI29_01037 PF00912 Transglycosylase CBI29_01038 PF02503 Polyphosphate kinase middle domain CBI29_01038 PF13089 Polyphosphate kinase N-terminal domain CBI29_01038 PF13090 Polyphosphate kinase C-terminal domain CBI29_01039 PF05036 Sporulation related domain CBI29_01040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01040 PF03466 LysR substrate binding domain CBI29_01041 PF00561 alpha/beta hydrolase fold CBI29_01042 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_01043 PF00301 Rubredoxin CBI29_01044 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CBI29_01045 PF05728 Uncharacterised protein family (UPF0227) CBI29_01046 PF00152 tRNA synthetases class II (D, K and N) CBI29_01046 PF01336 OB-fold nucleic acid binding domain CBI29_01047 PF14052 Capsule assembly protein Wzi CBI29_01049 PF01507 Phosphoadenosine phosphosulfate reductase family CBI29_01050 PF00009 Elongation factor Tu GTP binding domain CBI29_01051 PF09998 CBI29_01051 CBI29_01053 PF03600 Citrate transporter CBI29_01054 PF00571 CBS domain CBI29_01054 PF01595 CBI29_01054 CBI29_01054 PF03471 Transporter associated domain CBI29_01055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01055 PF03466 LysR substrate binding domain CBI29_01056 PF00463 Isocitrate lyase family CBI29_01057 PF04170 NlpE N-terminal domain CBI29_01059 PF01774 UreD urease accessory protein CBI29_01060 PF00547 Urease, gamma subunit CBI29_01061 PF00699 Urease beta subunit CBI29_01062 PF00449 Urease alpha-subunit, N-terminal domain CBI29_01062 PF01979 Amidohydrolase family CBI29_01063 PF02814 UreE urease accessory protein, N-terminal domain CBI29_01063 PF05194 UreE urease accessory protein, C-terminal domain CBI29_01064 PF01730 UreF CBI29_01065 PF02492 CobW/HypB/UreG, nucleotide-binding domain CBI29_01066 PF04955 CBI29_01066 CBI29_01067 PF03602 Conserved hypothetical protein 95 CBI29_01068 PF00905 Penicillin binding protein transpeptidase domain CBI29_01068 PF03717 Penicillin-binding Protein dimerisation domain CBI29_01071 PF00406 Adenylate kinase CBI29_01071 PF05191 Adenylate kinase, active site lid CBI29_01072 PF00633 Helix-hairpin-helix motif CBI29_01072 PF00730 HhH-GPD superfamily base excision DNA repair protein CBI29_01072 PF10576 Iron-sulfur binding domain of endonuclease III CBI29_01073 PF04060 Putative Fe-S cluster CBI29_01073 PF14697 4Fe-4S dicluster domain CBI29_01074 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CBI29_01074 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CBI29_01075 PF03724 META domain CBI29_01075 PF14302 CBI29_01075 CBI29_01076 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CBI29_01077 PF02590 Predicted SPOUT methyltransferase CBI29_01078 PF00004 ATPase family associated with various cellular activities (AAA) CBI29_01078 PF02190 ATP-dependent protease La (LON) domain CBI29_01078 PF05362 Lon protease (S16) C-terminal proteolytic domain CBI29_01079 PF01812 5-formyltetrahydrofolate cyclo-ligase family CBI29_01083 PF05164 Cell division protein ZapA CBI29_01085 PF03695 Uncharacterised protein family (UPF0149) CBI29_01086 PF00557 Metallopeptidase family M24 CBI29_01086 PF05195 Aminopeptidase P, N-terminal domain CBI29_01087 PF01494 FAD binding domain CBI29_01088 PF01494 FAD binding domain CBI29_01090 PF13411 MerR HTH family regulatory protein CBI29_01091 PF01545 Cation efflux family CBI29_01092 PF01810 CBI29_01092 CBI29_01093 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01093 PF03466 LysR substrate binding domain CBI29_01095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CBI29_01096 PF02021 Uncharacterised protein family UPF0102 CBI29_01097 PF04972 BON domain CBI29_01098 PF07859 alpha/beta hydrolase fold CBI29_01099 PF00293 NUDIX domain CBI29_01099 PF09297 NADH pyrophosphatase zinc ribbon domain CBI29_01101 PF00075 RNase H CBI29_01101 PF00929 Exonuclease CBI29_01102 PF01464 Transglycosylase SLT domain CBI29_01102 PF01476 LysM domain CBI29_01103 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CBI29_01104 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_01105 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_01106 PF00005 ABC transporter CBI29_01107 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CBI29_01114 PF00593 TonB dependent receptor CBI29_01114 PF07715 TonB-dependent Receptor Plug Domain CBI29_01116 PF00929 Exonuclease CBI29_01117 PF01979 Amidohydrolase family CBI29_01118 PF00990 GGDEF domain CBI29_01119 PF00764 Arginosuccinate synthase CBI29_01120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CBI29_01120 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_01122 PF03180 NLPA lipoprotein CBI29_01124 PF00440 Bacterial regulatory proteins, tetR family CBI29_01125 PF05954 Phage late control gene D protein (GPD) CBI29_01125 PF10106 CBI29_01125 CBI29_01125 PF13296 CBI29_01125 CBI29_01126 PF03527 CBI29_01126 CBI29_01126 PF05593 CBI29_01126 CBI29_01132 PF13086 AAA domain CBI29_01132 PF13087 AAA domain CBI29_01134 PF00324 Amino acid permease CBI29_01135 PF01266 FAD dependent oxidoreductase CBI29_01136 PF00324 Amino acid permease CBI29_01137 PF02743 Cache domain CBI29_01138 PF00392 Bacterial regulatory proteins, gntR family CBI29_01138 PF07729 FCD domain CBI29_01139 PF12680 SnoaL-like domain CBI29_01140 PF00171 Aldehyde dehydrogenase family CBI29_01141 PF01037 AsnC family CBI29_01141 PF13404 AsnC-type helix-turn-helix domain CBI29_01142 PF00202 Aminotransferase class-III CBI29_01143 PF04958 Arginine N-succinyltransferase beta subunit CBI29_01144 PF00324 Amino acid permease CBI29_01146 PF14085 CBI29_01146 CBI29_01148 PF00171 Aldehyde dehydrogenase family CBI29_01149 PF12625 CBI29_01149 CBI29_01149 PF12833 Helix-turn-helix domain CBI29_01150 PF00892 EamA-like transporter family CBI29_01151 PF04295 CBI29_01151 CBI29_01151 PF08666 SAF domain CBI29_01152 PF07690 Major Facilitator Superfamily CBI29_01153 PF13378 Enolase C-terminal domain-like CBI29_01154 PF00701 Dihydrodipicolinate synthetase family CBI29_01155 PF00171 Aldehyde dehydrogenase family CBI29_01156 PF00392 Bacterial regulatory proteins, gntR family CBI29_01156 PF07729 FCD domain CBI29_01157 PF07519 Tannase and feruloyl esterase CBI29_01158 PF03061 Thioesterase superfamily CBI29_01159 PF11578 Protein of unknown function (DUF3237) CBI29_01160 PF03573 outer membrane porin, OprD family CBI29_01161 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_01161 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_01161 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_01162 PF00501 AMP-binding enzyme CBI29_01163 PF00171 Aldehyde dehydrogenase family CBI29_01164 PF00378 Enoyl-CoA hydratase/isomerase family CBI29_01165 PF07690 Major Facilitator Superfamily CBI29_01166 PF01047 MarR family CBI29_01167 PF00392 Bacterial regulatory proteins, gntR family CBI29_01167 PF07729 FCD domain CBI29_01168 PF00111 2Fe-2S iron-sulfur cluster binding domain CBI29_01169 PF00355 Rieske [2Fe-2S] domain CBI29_01170 PF07690 Major Facilitator Superfamily CBI29_01171 PF03573 outer membrane porin, OprD family CBI29_01172 PF00732 GMC oxidoreductase CBI29_01172 PF05199 GMC oxidoreductase CBI29_01173 PF07859 alpha/beta hydrolase fold CBI29_01174 PF00106 short chain dehydrogenase CBI29_01175 PF00743 Flavin-binding monooxygenase-like CBI29_01176 PF12625 CBI29_01176 CBI29_01176 PF12833 Helix-turn-helix domain CBI29_01177 PF04072 Leucine carboxyl methyltransferase CBI29_01178 PF13738 Pyridine nucleotide-disulphide oxidoreductase CBI29_01179 PF00106 short chain dehydrogenase CBI29_01180 PF10118 CBI29_01180 CBI29_01181 PF00440 Bacterial regulatory proteins, tetR family CBI29_01182 PF02678 Pirin CBI29_01183 PF10118 CBI29_01183 CBI29_01184 PF00106 short chain dehydrogenase CBI29_01185 PF00743 Flavin-binding monooxygenase-like CBI29_01187 PF00860 Permease family CBI29_01188 PF00962 Adenosine/AMP deaminase CBI29_01189 PF01292 Prokaryotic cytochrome b561 CBI29_01191 PF01351 Ribonuclease HII CBI29_01192 PF02599 Global regulator protein family CBI29_01193 PF00696 Amino acid kinase family CBI29_01193 PF01842 ACT domain CBI29_01193 PF13840 ACT domain CBI29_01200 PF13935 CBI29_01200 CBI29_01213 PF01507 Phosphoadenosine phosphosulfate reductase family CBI29_01215 PF00145 C-5 cytosine-specific DNA methylase CBI29_01217 PF01695 IstB-like ATP binding protein CBI29_01220 PF05866 Endodeoxyribonuclease RusA CBI29_01221 PF12844 Helix-turn-helix domain CBI29_01226 PF15919 CBI29_01226 CBI29_01227 PF10547 CBI29_01227 CBI29_01238 PF01258 Prokaryotic dksA/traR C4-type zinc finger CBI29_01241 PF12571 CBI29_01241 CBI29_01255 PF09327 CBI29_01255 CBI29_01255 PF15711 CBI29_01255 CBI29_01263 PF00271 Helicase conserved C-terminal domain CBI29_01263 PF04851 Type III restriction enzyme, res subunit CBI29_01268 PF16082 CBI29_01268 CBI29_01272 PF05488 PAAR motif CBI29_01274 PF00817 impB/mucB/samB family CBI29_01274 PF11799 impB/mucB/samB family C-terminal domain CBI29_01274 PF13438 CBI29_01274 CBI29_01275 PF00717 Peptidase S24-like CBI29_01276 PF02586 Uncharacterised ACR, COG2135 CBI29_01279 PF00589 Phage integrase family CBI29_01279 PF13356 Domain of unknown function (DUF4102) CBI29_01280 PF01411 tRNA synthetases class II (A) CBI29_01280 PF02272 DHHA1 domain CBI29_01280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CBI29_01281 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CBI29_01281 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CBI29_01282 PF13393 Histidyl-tRNA synthetase CBI29_01283 PF00709 Adenylosuccinate synthetase CBI29_01285 PF01435 Peptidase family M48 CBI29_01286 PF00248 Aldo/keto reductase family CBI29_01287 PF00027 Cyclic nucleotide-binding domain CBI29_01287 PF00325 Bacterial regulatory proteins, crp family CBI29_01288 PF02566 OsmC-like protein CBI29_01289 PF00583 Acetyltransferase (GNAT) family CBI29_01290 PF01551 Peptidase family M23 CBI29_01291 PF00004 ATPase family associated with various cellular activities (AAA) CBI29_01291 PF02861 Clp amino terminal domain CBI29_01291 PF07724 AAA domain (Cdc48 subfamily) CBI29_01291 PF10431 C-terminal, D2-small domain, of ClpB protein CBI29_01292 PF02464 Competence-damaged protein CBI29_01294 PF01170 Putative RNA methylase family UPF0020 CBI29_01294 PF02926 THUMP domain CBI29_01294 PF10672 S-adenosylmethionine-dependent methyltransferase CBI29_01296 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CBI29_01296 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CBI29_01298 PF00691 OmpA family CBI29_01299 PF03807 NADP oxidoreductase coenzyme F420-dependent CBI29_01299 PF10728 Domain of unknown function (DUF2520) CBI29_01300 PF00043 Glutathione S-transferase, C-terminal domain CBI29_01300 PF02798 Glutathione S-transferase, N-terminal domain CBI29_01301 PF02390 Putative methyltransferase CBI29_01302 PF00932 Lamin Tail Domain CBI29_01303 PF00043 Glutathione S-transferase, C-terminal domain CBI29_01303 PF02798 Glutathione S-transferase, N-terminal domain CBI29_01305 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_01305 PF13192 Thioredoxin domain CBI29_01306 PF07866 Protein of unknown function (DUF1653) CBI29_01307 PF01596 O-methyltransferase CBI29_01308 PF13619 CBI29_01308 CBI29_01309 PF00578 AhpC/TSA family CBI29_01309 PF10417 C-terminal domain of 1-Cys peroxiredoxin CBI29_01310 PF00270 DEAD/DEAH box helicase CBI29_01310 PF00271 Helicase conserved C-terminal domain CBI29_01310 PF04408 Helicase associated domain (HA2) CBI29_01310 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CBI29_01310 PF11898 CBI29_01310 CBI29_01311 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CBI29_01311 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CBI29_01312 PF03573 outer membrane porin, OprD family CBI29_01313 PF07690 Major Facilitator Superfamily CBI29_01314 PF03594 CBI29_01314 CBI29_01315 PF00106 short chain dehydrogenase CBI29_01316 PF00111 2Fe-2S iron-sulfur cluster binding domain CBI29_01316 PF00175 Oxidoreductase NAD-binding domain CBI29_01316 PF00970 Oxidoreductase FAD-binding domain CBI29_01317 PF00866 Ring hydroxylating beta subunit CBI29_01318 PF00355 Rieske [2Fe-2S] domain CBI29_01318 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CBI29_01319 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01319 PF03466 LysR substrate binding domain CBI29_01320 PF00403 Heavy-metal-associated domain CBI29_01321 PF00122 E1-E2 ATPase CBI29_01321 PF00403 Heavy-metal-associated domain CBI29_01321 PF00702 haloacid dehalogenase-like hydrolase CBI29_01322 PF00376 MerR family regulatory protein CBI29_01322 PF09278 MerR, DNA binding CBI29_01323 PF04828 Glutathione-dependent formaldehyde-activating enzyme CBI29_01325 PF03860 Domain of Unknown Function (DUF326) CBI29_01327 PF01810 CBI29_01327 CBI29_01329 PF02609 Exonuclease VII small subunit CBI29_01330 PF02601 CBI29_01330 CBI29_01330 PF13742 CBI29_01330 CBI29_01333 PF00717 Peptidase S24-like CBI29_01333 PF12844 Helix-turn-helix domain CBI29_01336 PF05838 Glycosyl hydrolase 108 CBI29_01336 PF09374 Predicted Peptidoglycan domain CBI29_01337 PF01810 CBI29_01337 CBI29_01338 PF00313 'Cold-shock' DNA-binding domain CBI29_01340 PF03807 NADP oxidoreductase coenzyme F420-dependent CBI29_01340 PF14748 Pyrroline-5-carboxylate reductase dimerisation CBI29_01344 PF04233 CBI29_01344 CBI29_01345 PF07690 Major Facilitator Superfamily CBI29_01346 PF01638 HxlR-like helix-turn-helix CBI29_01348 PF13628 CBI29_01348 CBI29_01357 PF10045 CBI29_01357 CBI29_01358 PF17289 CBI29_01358 CBI29_01359 PF06381 CBI29_01359 CBI29_01360 PF04233 CBI29_01360 CBI29_01361 PF09926 CBI29_01361 CBI29_01363 PF09979 CBI29_01363 CBI29_01369 PF16223 CBI29_01369 CBI29_01370 PF05838 Glycosyl hydrolase 108 CBI29_01371 PF05838 Glycosyl hydrolase 108 CBI29_01371 PF09374 Predicted Peptidoglycan domain CBI29_01375 PF00589 Phage integrase family CBI29_01378 PF01406 tRNA synthetases class I (C) catalytic domain CBI29_01378 PF09190 DALR domain CBI29_01379 PF00571 CBS domain CBI29_01379 PF01380 SIS domain CBI29_01380 PF08282 haloacid dehalogenase-like hydrolase CBI29_01381 PF06835 Lipopolysaccharide-assembly, LptC-related CBI29_01382 PF03968 OstA-like protein CBI29_01383 PF00005 ABC transporter CBI29_01383 PF12399 Branched-chain amino acid ATP-binding cassette transporter CBI29_01384 PF02321 Outer membrane efflux protein CBI29_01385 PF00005 ABC transporter CBI29_01385 PF00664 ABC transporter transmembrane region CBI29_01386 PF13437 HlyD family secretion protein CBI29_01386 PF13533 Biotin-lipoyl like CBI29_01387 PF01205 Uncharacterized protein family UPF0029 CBI29_01387 PF09186 Domain of unknown function (DUF1949) CBI29_01388 PF00132 Bacterial transferase hexapeptide (six repeats) CBI29_01388 PF14602 Hexapeptide repeat of succinyl-transferase CBI29_01389 PF00582 Universal stress protein family CBI29_01390 PF01596 O-methyltransferase CBI29_01391 PF08291 Peptidase M15 CBI29_01392 PF00037 4Fe-4S binding domain CBI29_01392 PF11953 Domain of unknown function (DUF3470) CBI29_01393 PF13673 Acetyltransferase (GNAT) domain CBI29_01394 PF00488 MutS domain V CBI29_01394 PF01624 MutS domain I CBI29_01394 PF05188 MutS domain II CBI29_01394 PF05190 MutS family domain IV CBI29_01394 PF05192 MutS domain III CBI29_01395 PF01037 AsnC family CBI29_01395 PF13404 AsnC-type helix-turn-helix domain CBI29_01396 PF00892 EamA-like transporter family CBI29_01398 PF00563 EAL domain CBI29_01399 PF03279 CBI29_01399 CBI29_01400 PF00440 Bacterial regulatory proteins, tetR family CBI29_01401 PF07690 Major Facilitator Superfamily CBI29_01402 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) CBI29_01404 PF08856 CBI29_01404 CBI29_01405 PF13737 CBI29_01405 CBI29_01406 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CBI29_01406 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CBI29_01408 PF00583 Acetyltransferase (GNAT) family CBI29_01409 PF13354 Beta-lactamase enzyme family CBI29_01410 PF05954 Phage late control gene D protein (GPD) CBI29_01410 PF10106 CBI29_01410 CBI29_01410 PF13296 CBI29_01410 CBI29_01411 PF03527 CBI29_01411 CBI29_01411 PF05593 CBI29_01411 CBI29_01411 PF14412 CBI29_01411 CBI29_01418 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01418 PF03466 LysR substrate binding domain CBI29_01419 PF01566 CBI29_01419 CBI29_01420 PF03746 LamB/YcsF family CBI29_01421 PF07286 Protein of unknown function (DUF1445) CBI29_01422 PF02626 Allophanate hydrolase subunit 2 CBI29_01422 PF02682 Allophanate hydrolase subunit 1 CBI29_01423 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CBI29_01423 PF00364 Biotin-requiring enzyme CBI29_01423 PF02785 Biotin carboxylase C-terminal domain CBI29_01423 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CBI29_01424 PF00654 Voltage gated chloride channel CBI29_01425 PF08238 Sel1 repeat CBI29_01429 PF00440 Bacterial regulatory proteins, tetR family CBI29_01430 PF10604 Polyketide cyclase / dehydrase and lipid transport CBI29_01431 PF08240 Alcohol dehydrogenase GroES-like domain CBI29_01431 PF13823 Alcohol dehydrogenase GroES-associated CBI29_01432 PF09347 Domain of unknown function (DUF1989) CBI29_01433 PF09347 Domain of unknown function (DUF1989) CBI29_01434 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CBI29_01434 PF00364 Biotin-requiring enzyme CBI29_01434 PF02626 Allophanate hydrolase subunit 2 CBI29_01434 PF02682 Allophanate hydrolase subunit 1 CBI29_01434 PF02785 Biotin carboxylase C-terminal domain CBI29_01434 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CBI29_01435 PF02525 Flavodoxin-like fold CBI29_01436 PF01638 HxlR-like helix-turn-helix CBI29_01438 PF08753 NikR C terminal nickel binding domain CBI29_01439 PF01425 Amidase CBI29_01440 PF09084 NMT1/THI5 like CBI29_01441 PF00005 ABC transporter CBI29_01442 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_01445 PF05591 CBI29_01445 CBI29_01446 PF05943 CBI29_01446 CBI29_01447 PF05638 Protein of unknown function (DUF796) CBI29_01448 PF04965 Gene 25-like lysozyme CBI29_01449 PF05947 CBI29_01449 CBI29_01450 PF06996 CBI29_01450 CBI29_01452 PF06744 CBI29_01452 CBI29_01452 PF06761 CBI29_01452 CBI29_01452 PF14331 CBI29_01452 CBI29_01453 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) CBI29_01454 PF00691 OmpA family CBI29_01455 PF05488 PAAR motif CBI29_01456 PF00004 ATPase family associated with various cellular activities (AAA) CBI29_01456 PF07724 AAA domain (Cdc48 subfamily) CBI29_01456 PF10431 C-terminal, D2-small domain, of ClpB protein CBI29_01457 PF06812 CBI29_01457 CBI29_01458 PF05936 CBI29_01458 CBI29_01459 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) CBI29_01461 PF13539 D-alanyl-D-alanine carboxypeptidase CBI29_01462 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01462 PF03466 LysR substrate binding domain CBI29_01463 PF12796 Ankyrin repeats (3 copies) CBI29_01464 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CBI29_01465 PF07690 Major Facilitator Superfamily CBI29_01466 PF06224 CBI29_01466 CBI29_01467 PF00583 Acetyltransferase (GNAT) family CBI29_01468 PF02677 CBI29_01468 CBI29_01470 PF00376 MerR family regulatory protein CBI29_01470 PF09278 MerR, DNA binding CBI29_01471 PF03891 CBI29_01471 CBI29_01471 PF11720 Peptidase inhibitor I78 family CBI29_01473 PF00701 Dihydrodipicolinate synthetase family CBI29_01474 PF00892 EamA-like transporter family CBI29_01475 PF00392 Bacterial regulatory proteins, gntR family CBI29_01475 PF07729 FCD domain CBI29_01476 PF05544 Proline racemase CBI29_01477 PF01266 FAD dependent oxidoreductase CBI29_01478 PF13510 2Fe-2S iron-sulfur cluster binding domain CBI29_01479 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_01480 PF08448 PAS fold CBI29_01480 PF12833 Helix-turn-helix domain CBI29_01481 PF00083 Sugar (and other) transporter CBI29_01482 PF00171 Aldehyde dehydrogenase family CBI29_01483 PF13520 Amino acid permease CBI29_01484 PF03313 CBI29_01484 CBI29_01484 PF03315 Serine dehydratase beta chain CBI29_01485 PF00171 Aldehyde dehydrogenase family CBI29_01485 PF01575 MaoC like domain CBI29_01486 PF05138 Phenylacetic acid catabolic protein CBI29_01487 PF06243 Phenylacetic acid degradation B CBI29_01488 PF05138 Phenylacetic acid catabolic protein CBI29_01489 PF01883 Domain of unknown function DUF59 CBI29_01490 PF00111 2Fe-2S iron-sulfur cluster binding domain CBI29_01490 PF00175 Oxidoreductase NAD-binding domain CBI29_01490 PF00970 Oxidoreductase FAD-binding domain CBI29_01491 PF00378 Enoyl-CoA hydratase/isomerase family CBI29_01492 PF00378 Enoyl-CoA hydratase/isomerase family CBI29_01493 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CBI29_01493 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CBI29_01494 PF00108 Thiolase, N-terminal domain CBI29_01494 PF02803 Thiolase, C-terminal domain CBI29_01495 PF00501 AMP-binding enzyme CBI29_01495 PF14535 AMP-binding enzyme C-terminal domain CBI29_01496 PF07848 PaaX-like protein CBI29_01496 PF08223 PaaX-like protein C-terminal domain CBI29_01497 PF00132 Bacterial transferase hexapeptide (six repeats) CBI29_01498 PF03061 Thioesterase superfamily CBI29_01499 PF13175 AAA ATPase domain CBI29_01500 PF00580 UvrD/REP helicase N-terminal domain CBI29_01500 PF13361 UvrD-like helicase C-terminal domain CBI29_01501 PF00440 Bacterial regulatory proteins, tetR family CBI29_01506 PF00313 'Cold-shock' DNA-binding domain CBI29_01511 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01511 PF03466 LysR substrate binding domain CBI29_01512 PF02515 CoA-transferase family III CBI29_01513 PF00682 HMGL-like CBI29_01514 PF07690 Major Facilitator Superfamily CBI29_01515 PF00199 Catalase CBI29_01516 PF01292 Prokaryotic cytochrome b561 CBI29_01517 PF07045 Protein of unknown function (DUF1330) CBI29_01518 PF00392 Bacterial regulatory proteins, gntR family CBI29_01518 PF07729 FCD domain CBI29_01519 PF06684 Amino acid synthesis CBI29_01520 PF12697 Alpha/beta hydrolase family CBI29_01521 PF01613 Flavin reductase like domain CBI29_01522 PF00296 Luciferase-like monooxygenase CBI29_01523 PF00171 Aldehyde dehydrogenase family CBI29_01524 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CBI29_01526 PF00171 Aldehyde dehydrogenase family CBI29_01527 PF02627 Carboxymuconolactone decarboxylase family CBI29_01528 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01528 PF03466 LysR substrate binding domain CBI29_01529 PF02525 Flavodoxin-like fold CBI29_01530 PF01614 Bacterial transcriptional regulator CBI29_01530 PF09339 IclR helix-turn-helix domain CBI29_01531 PF01494 FAD binding domain CBI29_01532 PF00392 Bacterial regulatory proteins, gntR family CBI29_01532 PF07702 UTRA domain CBI29_01533 PF13343 Bacterial extracellular solute-binding protein CBI29_01534 PF00005 ABC transporter CBI29_01535 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_01536 PF01266 FAD dependent oxidoreductase CBI29_01537 PF00266 Aminotransferase class-V CBI29_01538 PF13419 Haloacid dehalogenase-like hydrolase CBI29_01539 PF07690 Major Facilitator Superfamily CBI29_01540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_01540 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_01540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_01541 PF02515 CoA-transferase family III CBI29_01542 PF01614 Bacterial transcriptional regulator CBI29_01542 PF09339 IclR helix-turn-helix domain CBI29_01543 PF00378 Enoyl-CoA hydratase/isomerase family CBI29_01544 PF03060 Nitronate monooxygenase CBI29_01545 PF07690 Major Facilitator Superfamily CBI29_01546 PF01614 Bacterial transcriptional regulator CBI29_01546 PF09339 IclR helix-turn-helix domain CBI29_01547 PF00108 Thiolase, N-terminal domain CBI29_01547 PF02803 Thiolase, C-terminal domain CBI29_01548 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CBI29_01548 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CBI29_01549 PF13561 Enoyl-(Acyl carrier protein) reductase CBI29_01550 PF00378 Enoyl-CoA hydratase/isomerase family CBI29_01551 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_01551 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_01551 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_01552 PF07690 Major Facilitator Superfamily CBI29_01553 PF01144 Coenzyme A transferase CBI29_01554 PF01144 Coenzyme A transferase CBI29_01556 PF07690 Major Facilitator Superfamily CBI29_01557 PF03061 Thioesterase superfamily CBI29_01558 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_01558 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_01558 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_01558 PF12418 CBI29_01558 CBI29_01558 PF12806 CBI29_01558 CBI29_01559 PF13622 Thioesterase-like superfamily CBI29_01560 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CBI29_01561 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01561 PF03466 LysR substrate binding domain CBI29_01562 PF00682 HMGL-like CBI29_01563 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CBI29_01563 PF00364 Biotin-requiring enzyme CBI29_01563 PF02785 Biotin carboxylase C-terminal domain CBI29_01563 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CBI29_01564 PF00378 Enoyl-CoA hydratase/isomerase family CBI29_01565 PF01039 Carboxyl transferase domain CBI29_01566 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_01566 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_01566 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_01567 PF00440 Bacterial regulatory proteins, tetR family CBI29_01568 PF00501 AMP-binding enzyme CBI29_01568 PF13193 AMP-binding enzyme C-terminal domain CBI29_01569 PF13649 Methyltransferase domain CBI29_01571 PF13472 GDSL-like Lipase/Acylhydrolase family CBI29_01572 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01572 PF03466 LysR substrate binding domain CBI29_01580 PF02464 Competence-damaged protein CBI29_01581 PF14518 Iron-containing redox enzyme CBI29_01582 PF00199 Catalase CBI29_01582 PF06628 Catalase-related immune-responsive CBI29_01583 PF13561 Enoyl-(Acyl carrier protein) reductase CBI29_01585 PF10685 CBI29_01585 CBI29_01587 PF00717 Peptidase S24-like CBI29_01588 PF01810 CBI29_01588 CBI29_01589 PF01037 AsnC family CBI29_01589 PF13412 Winged helix-turn-helix DNA-binding CBI29_01591 PF00072 Response regulator receiver domain CBI29_01591 PF00512 His Kinase A (phospho-acceptor) domain CBI29_01591 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_01592 PF00072 Response regulator receiver domain CBI29_01592 PF00196 Bacterial regulatory proteins, luxR family CBI29_01593 PF14542 GCN5-related N-acetyl-transferase CBI29_01594 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_01595 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_01596 PF00005 ABC transporter CBI29_01597 PF00497 Bacterial extracellular solute-binding proteins, family 3 CBI29_01598 PF00497 Bacterial extracellular solute-binding proteins, family 3 CBI29_01599 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01599 PF03466 LysR substrate binding domain CBI29_01600 PF01810 CBI29_01600 CBI29_01601 PF00266 Aminotransferase class-V CBI29_01603 PF00132 Bacterial transferase hexapeptide (six repeats) CBI29_01603 PF06426 Serine acetyltransferase, N-terminal CBI29_01604 PF00581 Rhodanese-like domain CBI29_01605 PF13561 Enoyl-(Acyl carrier protein) reductase CBI29_01606 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01606 PF03466 LysR substrate binding domain CBI29_01607 PF00043 Glutathione S-transferase, C-terminal domain CBI29_01607 PF02798 Glutathione S-transferase, N-terminal domain CBI29_01608 PF13417 Glutathione S-transferase, N-terminal domain CBI29_01608 PF14834 Glutathione S-transferase, C-terminal domain CBI29_01609 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01609 PF03466 LysR substrate binding domain CBI29_01610 PF03788 CBI29_01610 CBI29_01611 PF04172 CBI29_01611 CBI29_01612 PF00155 Aminotransferase class I and II CBI29_01612 PF00392 Bacterial regulatory proteins, gntR family CBI29_01613 PF04299 Putative FMN-binding domain CBI29_01614 PF13302 Acetyltransferase (GNAT) domain CBI29_01615 PF07690 Major Facilitator Superfamily CBI29_01616 PF16957 CBI29_01616 CBI29_01617 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CBI29_01618 PF06857 CBI29_01618 CBI29_01619 PF01039 Carboxyl transferase domain CBI29_01620 PF06833 Malonate decarboxylase gamma subunit (MdcE) CBI29_01621 PF10620 CBI29_01621 CBI29_01622 PF00698 Acyl transferase domain CBI29_01623 PF03817 CBI29_01623 CBI29_01624 PF03818 CBI29_01624 CBI29_01625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01625 PF03466 LysR substrate binding domain CBI29_01626 PF00155 Aminotransferase class I and II CBI29_01626 PF00392 Bacterial regulatory proteins, gntR family CBI29_01628 PF02322 CBI29_01628 CBI29_01629 PF01654 CBI29_01629 CBI29_01631 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CBI29_01632 PF00296 Luciferase-like monooxygenase CBI29_01633 PF00083 Sugar (and other) transporter CBI29_01635 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CBI29_01636 PF00005 ABC transporter CBI29_01637 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_01638 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CBI29_01639 PF01177 Asp/Glu/Hydantoin racemase CBI29_01640 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CBI29_01641 PF00392 Bacterial regulatory proteins, gntR family CBI29_01641 PF07729 FCD domain CBI29_01642 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01642 PF03466 LysR substrate binding domain CBI29_01643 PF00857 Isochorismatase family CBI29_01644 PF07969 Amidohydrolase family CBI29_01645 PF07235 CBI29_01645 CBI29_01646 PF03960 ArsC family CBI29_01647 PF01022 Bacterial regulatory protein, arsR family CBI29_01648 PF01758 Sodium Bile acid symporter family CBI29_01649 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01649 PF03466 LysR substrate binding domain CBI29_01650 PF02417 CBI29_01650 CBI29_01651 PF02417 CBI29_01651 CBI29_01652 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_01652 PF13192 Thioredoxin domain CBI29_01655 PF00132 Bacterial transferase hexapeptide (six repeats) CBI29_01655 PF06426 Serine acetyltransferase, N-terminal CBI29_01656 PF00588 SpoU rRNA Methylase family CBI29_01657 PF02811 PHP domain CBI29_01657 PF07733 Bacterial DNA polymerase III alpha subunit CBI29_01657 PF14579 Helix-hairpin-helix motif CBI29_01658 PF00710 Asparaginase CBI29_01659 PF00375 Sodium:dicarboxylate symporter family CBI29_01660 PF00155 Aminotransferase class I and II CBI29_01661 PF01641 SelR domain CBI29_01662 PF00255 Glutathione peroxidase CBI29_01663 PF02311 AraC-like ligand binding domain CBI29_01663 PF12833 Helix-turn-helix domain CBI29_01664 PF01810 CBI29_01664 CBI29_01665 PF00155 Aminotransferase class I and II CBI29_01666 PF01909 Nucleotidyltransferase domain CBI29_01666 PF01966 HD domain CBI29_01666 PF08335 GlnD PII-uridylyltransferase CBI29_01667 PF02222 ATP-grasp domain CBI29_01668 PF14552 Tautomerase enzyme CBI29_01669 PF05437 CBI29_01669 CBI29_01670 PF03591 CBI29_01670 CBI29_01673 PF00027 Cyclic nucleotide-binding domain CBI29_01673 PF13545 Crp-like helix-turn-helix domain CBI29_01674 PF06127 CBI29_01674 CBI29_01675 PF01926 50S ribosome-binding GTPase CBI29_01675 PF06071 Protein of unknown function (DUF933) CBI29_01676 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_01677 PF00005 ABC transporter CBI29_01677 PF09383 NIL domain CBI29_01678 PF03180 NLPA lipoprotein CBI29_01679 PF03180 NLPA lipoprotein CBI29_01680 PF00296 Luciferase-like monooxygenase CBI29_01681 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_01681 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CBI29_01682 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_01682 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_01682 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CBI29_01683 PF13417 Glutathione S-transferase, N-terminal domain CBI29_01683 PF14497 Glutathione S-transferase, C-terminal domain CBI29_01684 PF00497 Bacterial extracellular solute-binding proteins, family 3 CBI29_01685 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_01686 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_01687 PF00005 ABC transporter CBI29_01689 PF01037 AsnC family CBI29_01689 PF13412 Winged helix-turn-helix DNA-binding CBI29_01690 PF01709 Transcriptional regulator CBI29_01691 PF01553 Acyltransferase CBI29_01692 PF00440 Bacterial regulatory proteins, tetR family CBI29_01695 PF00589 Phage integrase family CBI29_01697 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01697 PF03466 LysR substrate binding domain CBI29_01698 PF05232 CBI29_01698 CBI29_01699 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CBI29_01701 PF00892 EamA-like transporter family CBI29_01702 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01702 PF03466 LysR substrate binding domain CBI29_01704 PF00419 Fimbrial protein CBI29_01705 PF00577 Outer membrane usher protein CBI29_01705 PF13953 PapC C-terminal domain CBI29_01705 PF13954 PapC N-terminal domain CBI29_01706 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CBI29_01706 PF02753 Pili assembly chaperone PapD, C-terminal domain CBI29_01707 PF16970 CBI29_01707 CBI29_01710 PF04055 Radical SAM superfamily CBI29_01710 PF06968 Biotin and Thiamin Synthesis associated domain CBI29_01711 PF08331 CBI29_01711 CBI29_01711 PF13484 CBI29_01711 CBI29_01712 PF01256 Carbohydrate kinase CBI29_01712 PF03853 YjeF-related protein N-terminus CBI29_01713 PF02075 Crossover junction endodeoxyribonuclease RuvC CBI29_01714 PF01381 Helix-turn-helix CBI29_01715 PF13420 Acetyltransferase (GNAT) domain CBI29_01716 PF00905 Penicillin binding protein transpeptidase domain CBI29_01717 PF04186 CBI29_01717 CBI29_01720 PF00438 S-adenosylmethionine synthetase, N-terminal domain CBI29_01720 PF02772 S-adenosylmethionine synthetase, central domain CBI29_01720 PF02773 S-adenosylmethionine synthetase, C-terminal domain CBI29_01721 PF00456 Transketolase, thiamine diphosphate binding domain CBI29_01721 PF02779 Transketolase, pyrimidine binding domain CBI29_01721 PF02780 Transketolase, C-terminal domain CBI29_01722 PF02566 OsmC-like protein CBI29_01723 PF04264 YceI-like domain CBI29_01724 PF04970 Lecithin retinol acyltransferase CBI29_01725 PF09992 Predicted periplasmic protein (DUF2233) CBI29_01727 PF05958 tRNA (Uracil-5-)-methyltransferase CBI29_01728 PF04229 GrpB protein CBI29_01729 PF00171 Aldehyde dehydrogenase family CBI29_01729 PF01619 Proline dehydrogenase CBI29_01729 PF14850 DNA-binding domain of Proline dehydrogenase CBI29_01730 PF01037 AsnC family CBI29_01730 PF13404 AsnC-type helix-turn-helix domain CBI29_01731 PF00474 Sodium:solute symporter family CBI29_01732 PF02146 Sir2 family CBI29_01733 PF01597 Glycine cleavage H-protein CBI29_01734 PF12625 CBI29_01734 CBI29_01734 PF12833 Helix-turn-helix domain CBI29_01735 PF01575 MaoC like domain CBI29_01736 PF00005 ABC transporter CBI29_01736 PF00664 ABC transporter transmembrane region CBI29_01737 PF09831 CBI29_01737 CBI29_01738 PF06912 CBI29_01738 CBI29_01739 PF00375 Sodium:dicarboxylate symporter family CBI29_01740 PF01022 Bacterial regulatory protein, arsR family CBI29_01741 PF00440 Bacterial regulatory proteins, tetR family CBI29_01742 PF08007 Cupin superfamily protein CBI29_01743 PF02545 Maf-like protein CBI29_01744 PF09996 Uncharacterized protein conserved in bacteria (DUF2237) CBI29_01745 PF00162 Phosphoglycerate kinase CBI29_01747 PF01116 Fructose-bisphosphate aldolase class-II CBI29_01748 PF00639 PPIC-type PPIASE domain CBI29_01748 PF09312 SurA N-terminal domain CBI29_01748 PF13616 PPIC-type PPIASE domain CBI29_01749 PF03968 OstA-like protein CBI29_01749 PF04453 Organic solvent tolerance protein CBI29_01750 PF01636 Phosphotransferase enzyme family CBI29_01751 PF00483 Nucleotidyl transferase CBI29_01752 PF02527 rRNA small subunit methyltransferase G CBI29_01753 PF13614 AAA domain CBI29_01754 PF02195 ParB-like nuclease domain CBI29_01755 PF01618 CBI29_01755 CBI29_01756 PF02472 Biopolymer transport protein ExbD/TolR CBI29_01757 PF00005 ABC transporter CBI29_01757 PF00664 ABC transporter transmembrane region CBI29_01758 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CBI29_01759 PF02348 Cytidylyltransferase CBI29_01760 PF13177 DNA polymerase III, delta subunit CBI29_01761 PF07238 PilZ domain CBI29_01762 PF01026 TatD related DNase CBI29_01763 PF00440 Bacterial regulatory proteins, tetR family CBI29_01764 PF07963 Prokaryotic N-terminal methylation motif CBI29_01765 PF02501 Type II secretion system (T2SS), protein I CBI29_01765 PF07963 Prokaryotic N-terminal methylation motif CBI29_01766 PF07963 Prokaryotic N-terminal methylation motif CBI29_01766 PF11612 Type II secretion system (T2SS), protein J CBI29_01767 PF03934 Type II secretion system (T2SS), protein K CBI29_01768 PF01242 6-pyruvoyl tetrahydropterin synthase CBI29_01769 PF03167 Uracil DNA glycosylase superfamily CBI29_01770 PF16113 CBI29_01770 CBI29_01771 PF14437 CBI29_01771 CBI29_01772 PF10604 Polyketide cyclase / dehydrase and lipid transport CBI29_01773 PF02224 Cytidylate kinase CBI29_01774 PF00575 S1 RNA binding domain CBI29_01775 PF00216 Bacterial DNA-binding protein CBI29_01776 PF06305 CBI29_01776 CBI29_01777 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CBI29_01778 PF03956 CBI29_01778 CBI29_01779 PF00743 Flavin-binding monooxygenase-like CBI29_01780 PF12625 CBI29_01780 CBI29_01780 PF12833 Helix-turn-helix domain CBI29_01781 PF03969 AFG1-like ATPase CBI29_01782 PF01274 Malate synthase CBI29_01783 PF02472 Biopolymer transport protein ExbD/TolR CBI29_01784 PF02472 Biopolymer transport protein ExbD/TolR CBI29_01785 PF01618 CBI29_01785 CBI29_01786 PF03544 Gram-negative bacterial TonB protein C-terminal CBI29_01787 PF00593 TonB dependent receptor CBI29_01787 PF07715 TonB-dependent Receptor Plug Domain CBI29_01789 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CBI29_01790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CBI29_01791 PF01432 Peptidase family M3 CBI29_01792 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_01793 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_01793 PF12911 CBI29_01793 CBI29_01794 PF00005 ABC transporter CBI29_01794 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CBI29_01795 PF02586 Uncharacterised ACR, COG2135 CBI29_01797 PF00459 Inositol monophosphatase family CBI29_01798 PF00300 Histidine phosphatase superfamily (branch 1) CBI29_01799 PF01649 Ribosomal protein S20 CBI29_01800 PF01118 Semialdehyde dehydrogenase, NAD binding domain CBI29_01801 PF03737 Demethylmenaquinone methyltransferase CBI29_01802 PF13417 Glutathione S-transferase, N-terminal domain CBI29_01803 PF04261 Dyp-type peroxidase family CBI29_01805 PF00270 DEAD/DEAH box helicase CBI29_01805 PF00271 Helicase conserved C-terminal domain CBI29_01805 PF02559 CarD-like/TRCF domain CBI29_01805 PF03461 TRCF domain CBI29_01806 PF01230 HIT domain CBI29_01807 PF00211 Adenylate and Guanylate cyclase catalytic domain CBI29_01808 PF00111 2Fe-2S iron-sulfur cluster binding domain CBI29_01809 PF00012 Hsp70 protein CBI29_01810 PF00226 DnaJ domain CBI29_01810 PF07743 HSCB C-terminal oligomerisation domain CBI29_01811 PF01521 Iron-sulphur cluster biosynthesis CBI29_01812 PF01592 NifU-like N terminal domain CBI29_01813 PF00266 Aminotransferase class-V CBI29_01814 PF02082 Transcriptional regulator CBI29_01816 PF05597 CBI29_01816 CBI29_01817 PF00216 Bacterial DNA-binding protein CBI29_01818 PF13616 PPIC-type PPIASE domain CBI29_01818 PF13624 SurA N-terminal domain CBI29_01819 PF12833 Helix-turn-helix domain CBI29_01819 PF12852 Cupin CBI29_01820 PF00487 CBI29_01820 CBI29_01821 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_01821 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_01822 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_01822 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_01823 PF03109 CBI29_01823 CBI29_01825 PF04073 Aminoacyl-tRNA editing domain CBI29_01826 PF04183 IucA / IucC family CBI29_01826 PF06276 Ferric iron reductase FhuF-like transporter CBI29_01827 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CBI29_01828 PF07690 Major Facilitator Superfamily CBI29_01829 PF04183 IucA / IucC family CBI29_01829 PF06276 Ferric iron reductase FhuF-like transporter CBI29_01830 PF04183 IucA / IucC family CBI29_01830 PF06276 Ferric iron reductase FhuF-like transporter CBI29_01831 PF11575 CBI29_01831 CBI29_01832 PF03737 Demethylmenaquinone methyltransferase CBI29_01833 PF00593 TonB dependent receptor CBI29_01833 PF07715 TonB-dependent Receptor Plug Domain CBI29_01835 PF03929 CBI29_01835 CBI29_01837 PF13523 Acetyltransferase (GNAT) domain CBI29_01838 PF08125 Mannitol dehydrogenase C-terminal domain CBI29_01838 PF13419 Haloacid dehalogenase-like hydrolase CBI29_01839 PF13563 2'-5' RNA ligase superfamily CBI29_01840 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CBI29_01841 PF02277 Phosphoribosyltransferase CBI29_01842 PF00300 Histidine phosphatase superfamily (branch 1) CBI29_01843 PF00328 Histidine phosphatase superfamily (branch 2) CBI29_01844 PF02654 CBI29_01844 CBI29_01845 PF00793 DAHP synthetase I family CBI29_01846 PF01925 CBI29_01846 CBI29_01848 PF03929 CBI29_01848 CBI29_01850 PF00593 TonB dependent receptor CBI29_01850 PF07715 TonB-dependent Receptor Plug Domain CBI29_01851 PF02684 CBI29_01851 CBI29_01852 PF10977 CBI29_01852 CBI29_01854 PF06078 Bacterial protein of unknown function (DUF937) CBI29_01855 PF13609 Gram-negative porin CBI29_01856 PF01230 HIT domain CBI29_01857 PF13308 YARHG domain CBI29_01858 PF04828 Glutathione-dependent formaldehyde-activating enzyme CBI29_01861 PF13103 TonB C terminal CBI29_01862 PF08241 Methyltransferase domain CBI29_01863 PF00561 alpha/beta hydrolase fold CBI29_01864 PF01053 Cys/Met metabolism PLP-dependent enzyme CBI29_01866 PF02575 YbaB/EbfC DNA-binding family CBI29_01867 PF02132 RecR protein CBI29_01867 PF13662 Toprim domain CBI29_01868 PF00570 HRDC domain CBI29_01868 PF01612 3'-5' exonuclease CBI29_01872 PF05166 YcgL domain CBI29_01874 PF00004 ATPase family associated with various cellular activities (AAA) CBI29_01875 PF05762 VWA domain containing CoxE-like protein CBI29_01876 PF00291 Pyridoxal-phosphate dependent enzyme CBI29_01877 PF05175 Methyltransferase small domain CBI29_01878 PF01264 Chorismate synthase CBI29_01879 PF00990 GGDEF domain CBI29_01880 PF14518 Iron-containing redox enzyme CBI29_01882 PF04055 Radical SAM superfamily CBI29_01883 PF00676 Dehydrogenase E1 component CBI29_01884 PF02779 Transketolase, pyrimidine binding domain CBI29_01884 PF02780 Transketolase, C-terminal domain CBI29_01885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CBI29_01885 PF00364 Biotin-requiring enzyme CBI29_01885 PF02817 e3 binding domain CBI29_01886 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CBI29_01886 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_01887 PF00106 short chain dehydrogenase CBI29_01888 PF00107 Zinc-binding dehydrogenase CBI29_01888 PF08240 Alcohol dehydrogenase GroES-like domain CBI29_01889 PF01062 CBI29_01889 CBI29_01890 PF00158 Sigma-54 interaction domain CBI29_01890 PF02954 Bacterial regulatory protein, Fis family CBI29_01891 PF00753 Metallo-beta-lactamase superfamily CBI29_01892 PF04273 Putative phosphatase (DUF442) CBI29_01892 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_01893 PF01925 CBI29_01893 CBI29_01894 PF00742 Homoserine dehydrogenase CBI29_01894 PF03447 Homoserine dehydrogenase, NAD binding domain CBI29_01895 PF00892 EamA-like transporter family CBI29_01896 PF12833 Helix-turn-helix domain CBI29_01897 PF01638 HxlR-like helix-turn-helix CBI29_01898 PF02525 Flavodoxin-like fold CBI29_01899 PF02417 CBI29_01899 CBI29_01900 PF00392 Bacterial regulatory proteins, gntR family CBI29_01900 PF07702 UTRA domain CBI29_01901 PF00890 FAD binding domain CBI29_01901 PF02910 Fumarate reductase flavoprotein C-term CBI29_01902 PF13187 4Fe-4S dicluster domain CBI29_01903 PF13379 NMT1-like family CBI29_01904 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_01905 PF00005 ABC transporter CBI29_01906 PF13646 HEAT repeats CBI29_01907 PF06155 Protein of unknown function (DUF971) CBI29_01908 PF00083 Sugar (and other) transporter CBI29_01908 PF07690 Major Facilitator Superfamily CBI29_01909 PF00593 TonB dependent receptor CBI29_01909 PF07715 TonB-dependent Receptor Plug Domain CBI29_01910 PF00206 Lyase CBI29_01910 PF10415 Fumarase C C-terminus CBI29_01913 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01913 PF03466 LysR substrate binding domain CBI29_01914 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01914 PF03466 LysR substrate binding domain CBI29_01915 PF00108 Thiolase, N-terminal domain CBI29_01915 PF02803 Thiolase, C-terminal domain CBI29_01916 PF02667 CBI29_01916 CBI29_01917 PF01144 Coenzyme A transferase CBI29_01918 PF01144 Coenzyme A transferase CBI29_01919 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01919 PF03466 LysR substrate binding domain CBI29_01921 PF02447 CBI29_01921 CBI29_01922 PF13561 Enoyl-(Acyl carrier protein) reductase CBI29_01923 PF12833 Helix-turn-helix domain CBI29_01923 PF14525 CBI29_01923 CBI29_01924 PF07690 Major Facilitator Superfamily CBI29_01925 PF01738 Dienelactone hydrolase family CBI29_01926 PF13561 Enoyl-(Acyl carrier protein) reductase CBI29_01928 PF01613 Flavin reductase like domain CBI29_01929 PF13557 CBI29_01929 CBI29_01930 PF12833 Helix-turn-helix domain CBI29_01930 PF14525 CBI29_01930 CBI29_01931 PF00111 2Fe-2S iron-sulfur cluster binding domain CBI29_01931 PF00175 Oxidoreductase NAD-binding domain CBI29_01931 PF00970 Oxidoreductase FAD-binding domain CBI29_01932 PF00866 Ring hydroxylating beta subunit CBI29_01933 PF00355 Rieske [2Fe-2S] domain CBI29_01933 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CBI29_01934 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_01935 PF13531 Bacterial extracellular solute-binding protein CBI29_01936 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_01937 PF00005 ABC transporter CBI29_01938 PF01609 Transposase DDE domain CBI29_01939 PF01609 Transposase DDE domain CBI29_01940 PF13561 Enoyl-(Acyl carrier protein) reductase CBI29_01941 PF00857 Isochorismatase family CBI29_01942 PF01475 Ferric uptake regulator family CBI29_01943 PF00149 Calcineurin-like phosphoesterase CBI29_01943 PF02872 5'-nucleotidase, C-terminal domain CBI29_01944 PF02503 Polyphosphate kinase middle domain CBI29_01944 PF13089 Polyphosphate kinase N-terminal domain CBI29_01944 PF13090 Polyphosphate kinase C-terminal domain CBI29_01945 PF12706 Beta-lactamase superfamily domain CBI29_01946 PF03070 TENA/THI-4/PQQC family CBI29_01947 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CBI29_01948 PF04055 Radical SAM superfamily CBI29_01948 PF13186 Iron-sulfur cluster-binding domain CBI29_01948 PF13353 4Fe-4S single cluster domain CBI29_01949 PF01244 Membrane dipeptidase (Peptidase family M19) CBI29_01953 PF13091 PLD-like domain CBI29_01956 PF00199 Catalase CBI29_01958 PF00107 Zinc-binding dehydrogenase CBI29_01958 PF08240 Alcohol dehydrogenase GroES-like domain CBI29_01959 PF16223 CBI29_01959 CBI29_01960 PF00419 Fimbrial protein CBI29_01961 PF00577 Outer membrane usher protein CBI29_01961 PF13953 PapC C-terminal domain CBI29_01961 PF13954 PapC N-terminal domain CBI29_01962 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CBI29_01962 PF02753 Pili assembly chaperone PapD, C-terminal domain CBI29_01963 PF02486 CBI29_01963 CBI29_01967 PF02486 CBI29_01967 CBI29_01970 PF10389 Bacteriophage coat protein B CBI29_01972 PF10734 CBI29_01972 CBI29_01973 PF05707 Zonular occludens toxin (Zot) CBI29_01977 PF02486 CBI29_01977 CBI29_01980 PF05144 CBI29_01980 CBI29_01980 PF05155 CBI29_01980 CBI29_01984 PF05616 CBI29_01984 CBI29_01985 PF10734 CBI29_01985 CBI29_01986 PF05707 Zonular occludens toxin (Zot) CBI29_01989 PF05144 CBI29_01989 CBI29_01989 PF05155 CBI29_01989 CBI29_01991 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CBI29_01993 PF01266 FAD dependent oxidoreductase CBI29_01994 PF00440 Bacterial regulatory proteins, tetR family CBI29_01995 PF13738 Pyridine nucleotide-disulphide oxidoreductase CBI29_01996 PF12146 Putative lysophospholipase CBI29_01997 PF02321 Outer membrane efflux protein CBI29_01998 PF00873 AcrB/AcrD/AcrF family CBI29_01999 PF16576 CBI29_01999 CBI29_02000 PF00072 Response regulator receiver domain CBI29_02000 PF00486 Transcriptional regulatory protein, C terminal CBI29_02001 PF00512 His Kinase A (phospho-acceptor) domain CBI29_02001 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_02003 PF12625 CBI29_02003 CBI29_02003 PF12833 Helix-turn-helix domain CBI29_02004 PF12146 Putative lysophospholipase CBI29_02005 PF00106 short chain dehydrogenase CBI29_02006 PF00106 short chain dehydrogenase CBI29_02007 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_02007 PF03466 LysR substrate binding domain CBI29_02008 PF00326 Prolyl oligopeptidase family CBI29_02009 PF00583 Acetyltransferase (GNAT) family CBI29_02013 PF00440 Bacterial regulatory proteins, tetR family CBI29_02014 PF00271 Helicase conserved C-terminal domain CBI29_02014 PF04851 Type III restriction enzyme, res subunit CBI29_02015 PF13328 HD domain CBI29_02017 PF01975 Survival protein SurE CBI29_02019 PF02321 Outer membrane efflux protein CBI29_02020 PF03321 GH3 auxin-responsive promoter CBI29_02022 PF07690 Major Facilitator Superfamily CBI29_02023 PF13437 HlyD family secretion protein CBI29_02023 PF13533 Biotin-lipoyl like CBI29_02024 PF01425 Amidase CBI29_02025 PF00196 Bacterial regulatory proteins, luxR family CBI29_02027 PF02219 Methylenetetrahydrofolate reductase CBI29_02027 PF12225 CBI29_02027 CBI29_02028 PF00293 NUDIX domain CBI29_02029 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CBI29_02030 PF00156 Phosphoribosyl transferase domain CBI29_02032 PF12833 Helix-turn-helix domain CBI29_02033 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CBI29_02033 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CBI29_02034 PF07690 Major Facilitator Superfamily CBI29_02035 PF01370 NAD dependent epimerase/dehydratase family CBI29_02036 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_02036 PF03466 LysR substrate binding domain CBI29_02037 PF01557 Fumarylacetoacetate (FAA) hydrolase family CBI29_02038 PF00920 Dehydratase family CBI29_02039 PF00171 Aldehyde dehydrogenase family CBI29_02040 PF00440 Bacterial regulatory proteins, tetR family CBI29_02040 PF14246 AefR-like transcriptional repressor, C-terminal region CBI29_02041 PF07690 Major Facilitator Superfamily CBI29_02042 PF13437 HlyD family secretion protein CBI29_02042 PF13533 Biotin-lipoyl like CBI29_02043 PF04657 CBI29_02043 CBI29_02044 PF04657 CBI29_02044 CBI29_02045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_02045 PF03466 LysR substrate binding domain CBI29_02046 PF07690 Major Facilitator Superfamily CBI29_02047 PF08450 SMP-30/Gluconolaconase/LRE-like region CBI29_02048 PF00392 Bacterial regulatory proteins, gntR family CBI29_02048 PF07702 UTRA domain CBI29_02049 PF07158 CBI29_02049 CBI29_02050 PF04909 Amidohydrolase CBI29_02051 PF07690 Major Facilitator Superfamily CBI29_02052 PF10077 CBI29_02052 CBI29_02055 PF14568 SMI1-KNR4 cell-wall CBI29_02056 PF10004 CBI29_02056 CBI29_02060 PF00440 Bacterial regulatory proteins, tetR family CBI29_02062 PF01546 Peptidase family M20/M25/M40 CBI29_02062 PF07687 Peptidase dimerisation domain CBI29_02064 PF00999 Sodium/hydrogen exchanger family CBI29_02064 PF02254 TrkA-N domain CBI29_02065 PF07995 Glucose / Sorbosone dehydrogenase CBI29_02066 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_02066 PF03466 LysR substrate binding domain CBI29_02067 PF00857 Isochorismatase family CBI29_02068 PF03992 Antibiotic biosynthesis monooxygenase CBI29_02070 PF07995 Glucose / Sorbosone dehydrogenase CBI29_02072 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CBI29_02073 PF10118 CBI29_02073 CBI29_02074 PF06314 Acetoacetate decarboxylase (ADC) CBI29_02075 PF00106 short chain dehydrogenase CBI29_02076 PF12625 CBI29_02076 CBI29_02076 PF12833 Helix-turn-helix domain CBI29_02077 PF00440 Bacterial regulatory proteins, tetR family CBI29_02078 PF12706 Beta-lactamase superfamily domain CBI29_02079 PF02082 Transcriptional regulator CBI29_02080 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_02081 PF01965 DJ-1/PfpI family CBI29_02082 PF13411 MerR HTH family regulatory protein CBI29_02083 PF01965 DJ-1/PfpI family CBI29_02084 PF03435 Saccharopine dehydrogenase CBI29_02085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CBI29_02086 PF00561 alpha/beta hydrolase fold CBI29_02088 PF00171 Aldehyde dehydrogenase family CBI29_02090 PF07690 Major Facilitator Superfamily CBI29_02091 PF00920 Dehydratase family CBI29_02092 PF00392 Bacterial regulatory proteins, gntR family CBI29_02092 PF07729 FCD domain CBI29_02093 PF09694 CBI29_02093 CBI29_02094 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_02094 PF03466 LysR substrate binding domain CBI29_02095 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CBI29_02095 PF13378 Enolase C-terminal domain-like CBI29_02096 PF02426 Muconolactone delta-isomerase CBI29_02097 PF00775 Dioxygenase CBI29_02097 PF04444 Catechol dioxygenase N terminus CBI29_02098 PF01144 Coenzyme A transferase CBI29_02099 PF01144 Coenzyme A transferase CBI29_02100 PF00108 Thiolase, N-terminal domain CBI29_02100 PF02803 Thiolase, C-terminal domain CBI29_02101 PF00561 alpha/beta hydrolase fold CBI29_02102 PF01804 Penicillin amidase CBI29_02103 PF00171 Aldehyde dehydrogenase family CBI29_02105 PF01179 Copper amine oxidase, enzyme domain CBI29_02105 PF02727 Copper amine oxidase, N2 domain CBI29_02105 PF02728 Copper amine oxidase, N3 domain CBI29_02105 PF07833 Copper amine oxidase N-terminal domain CBI29_02106 PF12833 Helix-turn-helix domain CBI29_02106 PF14525 CBI29_02106 CBI29_02107 PF01613 Flavin reductase like domain CBI29_02108 PF00111 2Fe-2S iron-sulfur cluster binding domain CBI29_02108 PF00175 Oxidoreductase NAD-binding domain CBI29_02108 PF00970 Oxidoreductase FAD-binding domain CBI29_02109 PF13561 Enoyl-(Acyl carrier protein) reductase CBI29_02110 PF00866 Ring hydroxylating beta subunit CBI29_02111 PF00355 Rieske [2Fe-2S] domain CBI29_02111 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CBI29_02112 PF13577 SnoaL-like domain CBI29_02114 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_02114 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CBI29_02115 PF01425 Amidase CBI29_02116 PF01047 MarR family CBI29_02117 PF07690 Major Facilitator Superfamily CBI29_02118 PF03573 outer membrane porin, OprD family CBI29_02119 PF00106 short chain dehydrogenase CBI29_02120 PF00300 Histidine phosphatase superfamily (branch 1) CBI29_02121 PF01636 Phosphotransferase enzyme family CBI29_02122 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_02122 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_02122 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_02123 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_02123 PF03466 LysR substrate binding domain CBI29_02124 PF01614 Bacterial transcriptional regulator CBI29_02124 PF09339 IclR helix-turn-helix domain CBI29_02125 PF00753 Metallo-beta-lactamase superfamily CBI29_02126 PF04143 CBI29_02126 CBI29_02127 PF04143 CBI29_02127 CBI29_02129 PF01011 PQQ enzyme repeat CBI29_02130 PF04966 Carbohydrate-selective porin, OprB family CBI29_02131 PF13229 Right handed beta helix region CBI29_02132 PF01487 Type I 3-dehydroquinase CBI29_02133 PF00775 Dioxygenase CBI29_02134 PF00775 Dioxygenase CBI29_02134 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CBI29_02135 PF02627 Carboxymuconolactone decarboxylase family CBI29_02136 PF07690 Major Facilitator Superfamily CBI29_02137 PF00561 alpha/beta hydrolase fold CBI29_02138 PF00206 Lyase CBI29_02138 PF10397 Adenylosuccinate lyase C-terminus CBI29_02139 PF00108 Thiolase, N-terminal domain CBI29_02139 PF02803 Thiolase, C-terminal domain CBI29_02140 PF01144 Coenzyme A transferase CBI29_02141 PF01144 Coenzyme A transferase CBI29_02142 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CBI29_02143 PF04977 Septum formation initiator CBI29_02144 PF04239 Protein of unknown function (DUF421) CBI29_02145 PF00113 Enolase, C-terminal TIM barrel domain CBI29_02145 PF03952 Enolase, N-terminal domain CBI29_02146 PF00793 DAHP synthetase I family CBI29_02147 PF00117 Glutamine amidotransferase class-I CBI29_02147 PF06418 CTP synthase N-terminus CBI29_02149 PF10118 CBI29_02149 CBI29_02150 PF12146 Putative lysophospholipase CBI29_02151 PF13472 GDSL-like Lipase/Acylhydrolase family CBI29_02152 PF12680 SnoaL-like domain CBI29_02153 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CBI29_02153 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_02154 PF03551 Transcriptional regulator PadR-like family CBI29_02154 PF10400 Virulence activator alpha C-term CBI29_02155 PF12697 Alpha/beta hydrolase family CBI29_02156 PF00793 DAHP synthetase I family CBI29_02157 PF02694 CBI29_02157 CBI29_02158 PF00004 ATPase family associated with various cellular activities (AAA) CBI29_02158 PF02861 Clp amino terminal domain CBI29_02158 PF07724 AAA domain (Cdc48 subfamily) CBI29_02158 PF10431 C-terminal, D2-small domain, of ClpB protein CBI29_02159 PF02617 ATP-dependent Clp protease adaptor protein ClpS CBI29_02161 PF01118 Semialdehyde dehydrogenase, NAD binding domain CBI29_02161 PF02774 Semialdehyde dehydrogenase, dimerisation domain CBI29_02163 PF01863 Protein of unknown function DUF45 CBI29_02164 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CBI29_02165 PF00291 Pyridoxal-phosphate dependent enzyme CBI29_02165 PF00585 C-terminal regulatory domain of Threonine dehydratase CBI29_02166 PF02254 TrkA-N domain CBI29_02167 PF02386 Cation transport protein CBI29_02168 PF02253 Phospholipase A1 CBI29_02169 PF00675 Insulinase (Peptidase family M16) CBI29_02169 PF05193 Peptidase M16 inactive domain CBI29_02169 PF08367 Peptidase M16C associated CBI29_02170 PF00593 TonB dependent receptor CBI29_02170 PF07715 TonB-dependent Receptor Plug Domain CBI29_02171 PF00294 pfkB family carbohydrate kinase CBI29_02172 PF00355 Rieske [2Fe-2S] domain CBI29_02173 PF07290 CBI29_02173 CBI29_02175 PF01654 CBI29_02175 CBI29_02176 PF02322 CBI29_02176 CBI29_02177 PF08173 CBI29_02177 CBI29_02178 PF09600 CBI29_02178 CBI29_02179 PF09829 CBI29_02179 CBI29_02180 PF00881 Nitroreductase family CBI29_02181 PF00448 SRP54-type protein, GTPase domain CBI29_02181 PF02881 SRP54-type protein, helical bundle domain CBI29_02185 PF11042 CBI29_02185 CBI29_02186 PF00571 CBS domain CBI29_02187 PF00202 Aminotransferase class-III CBI29_02188 PF00462 Glutaredoxin CBI29_02190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_02190 PF03466 LysR substrate binding domain CBI29_02191 PF00557 Metallopeptidase family M24 CBI29_02192 PF05525 CBI29_02192 CBI29_02193 PF03928 Domain of unknown function (DUF336) CBI29_02196 PF12146 Putative lysophospholipase CBI29_02197 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CBI29_02197 PF00381 PTS HPr component phosphorylation site CBI29_02197 PF00391 PEP-utilising enzyme, mobile domain CBI29_02197 PF02896 PEP-utilising enzyme, TIM barrel domain CBI29_02197 PF05524 PEP-utilising enzyme, N-terminal CBI29_02198 PF00294 pfkB family carbohydrate kinase CBI29_02199 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CBI29_02199 PF02378 Phosphotransferase system, EIIC CBI29_02200 PF08308 CBI29_02200 CBI29_02201 PF01047 MarR family CBI29_02203 PF00563 EAL domain CBI29_02203 PF00990 GGDEF domain CBI29_02203 PF08447 PAS fold CBI29_02203 PF08448 PAS fold CBI29_02204 PF00582 Universal stress protein family CBI29_02205 PF07995 Glucose / Sorbosone dehydrogenase CBI29_02206 PF02586 Uncharacterised ACR, COG2135 CBI29_02207 PF00916 CBI29_02207 CBI29_02207 PF01740 STAS domain CBI29_02208 PF00082 Subtilase family CBI29_02208 PF05922 Peptidase inhibitor I9 CBI29_02209 PF07859 alpha/beta hydrolase fold CBI29_02210 PF00324 Amino acid permease CBI29_02211 PF00266 Aminotransferase class-V CBI29_02212 PF01037 AsnC family CBI29_02212 PF13412 Winged helix-turn-helix DNA-binding CBI29_02213 PF13302 Acetyltransferase (GNAT) domain CBI29_02216 PF05666 CBI29_02216 CBI29_02217 PF13419 Haloacid dehalogenase-like hydrolase CBI29_02218 PF01479 S4 domain CBI29_02219 PF00154 recA bacterial DNA recombination protein CBI29_02220 PF02631 RecX family CBI29_02221 PF13174 Tetratricopeptide repeat CBI29_02221 PF16331 CBI29_02221 CBI29_02222 PF00132 Bacterial transferase hexapeptide (six repeats) CBI29_02222 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CBI29_02223 PF07977 FabA-like domain CBI29_02224 PF00132 Bacterial transferase hexapeptide (six repeats) CBI29_02224 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CBI29_02224 PF14602 Hexapeptide repeat of succinyl-transferase CBI29_02225 PF03938 Outer membrane protein (OmpH-like) CBI29_02226 PF01103 Surface antigen CBI29_02226 PF07244 Surface antigen variable number repeat CBI29_02227 PF00595 PDZ domain (Also known as DHR or GLGF) CBI29_02227 PF02163 Peptidase family M50 CBI29_02227 PF13180 PDZ domain CBI29_02228 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CBI29_02228 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal CBI29_02228 PF13288 DXP reductoisomerase C-terminal domain CBI29_02229 PF01148 Cytidylyltransferase family CBI29_02230 PF01255 Putative undecaprenyl diphosphate synthase CBI29_02231 PF01765 Ribosome recycling factor CBI29_02232 PF00696 Amino acid kinase family CBI29_02233 PF00919 Uncharacterized protein family UPF0004 CBI29_02233 PF04055 Radical SAM superfamily CBI29_02234 PF00512 His Kinase A (phospho-acceptor) domain CBI29_02234 PF00989 PAS fold CBI29_02234 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_02235 PF00072 Response regulator receiver domain CBI29_02235 PF00158 Sigma-54 interaction domain CBI29_02235 PF02954 Bacterial regulatory protein, Fis family CBI29_02236 PF00440 Bacterial regulatory proteins, tetR family CBI29_02237 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CBI29_02237 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CBI29_02239 PF02542 YgbB family CBI29_02241 PF01266 FAD dependent oxidoreductase CBI29_02245 PF00206 Lyase CBI29_02245 PF10415 Fumarase C C-terminus CBI29_02246 PF01370 NAD dependent epimerase/dehydratase family CBI29_02247 PF02635 DsrE/DsrF-like family CBI29_02250 PF04358 DsrC like protein CBI29_02251 PF00892 EamA-like transporter family CBI29_02252 PF00155 Aminotransferase class I and II CBI29_02252 PF00392 Bacterial regulatory proteins, gntR family CBI29_02253 PF01638 HxlR-like helix-turn-helix CBI29_02254 PF00994 Probable molybdopterin binding domain CBI29_02254 PF03453 MoeA N-terminal region (domain I and II) CBI29_02254 PF03454 MoeA C-terminal region (domain IV) CBI29_02255 PF00994 Probable molybdopterin binding domain CBI29_02255 PF01967 MoaC family CBI29_02256 PF02391 MoaE protein CBI29_02257 PF02597 ThiS family CBI29_02258 PF04055 Radical SAM superfamily CBI29_02258 PF06463 Molybdenum Cofactor Synthesis C CBI29_02258 PF13353 4Fe-4S single cluster domain CBI29_02259 PF00384 Molybdopterin oxidoreductase CBI29_02259 PF01568 Molydopterin dinucleotide binding domain CBI29_02259 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CBI29_02260 PF12804 MobA-like NTP transferase domain CBI29_02261 PF00384 Molybdopterin oxidoreductase CBI29_02261 PF01568 Molydopterin dinucleotide binding domain CBI29_02261 PF04324 BFD-like [2Fe-2S] binding domain CBI29_02261 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CBI29_02262 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_02262 PF13806 Rieske-like [2Fe-2S] domain CBI29_02263 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CBI29_02263 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CBI29_02263 PF04324 BFD-like [2Fe-2S] binding domain CBI29_02263 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_02265 PF00072 Response regulator receiver domain CBI29_02265 PF03861 ANTAR domain CBI29_02266 PF13379 NMT1-like family CBI29_02267 PF00817 impB/mucB/samB family CBI29_02267 PF11799 impB/mucB/samB family C-terminal domain CBI29_02267 PF13438 CBI29_02267 CBI29_02268 PF01220 Dehydroquinase class II CBI29_02269 PF00364 Biotin-requiring enzyme CBI29_02270 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CBI29_02270 PF02785 Biotin carboxylase C-terminal domain CBI29_02270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CBI29_02272 PF12832 MFS_1 like family CBI29_02273 PF14518 Iron-containing redox enzyme CBI29_02274 PF00440 Bacterial regulatory proteins, tetR family CBI29_02275 PF03929 CBI29_02275 CBI29_02276 PF01645 Conserved region in glutamate synthase CBI29_02277 PF12146 Putative lysophospholipase CBI29_02278 PF02698 DUF218 domain CBI29_02279 PF01565 FAD binding domain CBI29_02279 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CBI29_02280 PF01451 Low molecular weight phosphotyrosine protein phosphatase CBI29_02281 PF10282 Lactonase, 7-bladed beta-propeller CBI29_02282 PF00465 Iron-containing alcohol dehydrogenase CBI29_02283 PF13279 Thioesterase-like superfamily CBI29_02284 PF04185 Phosphoesterase family CBI29_02284 PF05506 CBI29_02284 CBI29_02286 PF12169 DNA polymerase III subunits gamma and tau domain III CBI29_02286 PF13177 DNA polymerase III, delta subunit CBI29_02287 PF07690 Major Facilitator Superfamily CBI29_02288 PF00440 Bacterial regulatory proteins, tetR family CBI29_02289 PF00144 Beta-lactamase CBI29_02290 PF01575 MaoC like domain CBI29_02291 PF13561 Enoyl-(Acyl carrier protein) reductase CBI29_02292 PF00108 Thiolase, N-terminal domain CBI29_02292 PF02803 Thiolase, C-terminal domain CBI29_02293 PF05232 CBI29_02293 CBI29_02294 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_02294 PF03466 LysR substrate binding domain CBI29_02295 PF00923 Transaldolase CBI29_02296 PF01810 CBI29_02296 CBI29_02297 PF01037 AsnC family CBI29_02297 PF13412 Winged helix-turn-helix DNA-binding CBI29_02298 PF03594 CBI29_02298 CBI29_02299 PF02308 CBI29_02299 CBI29_02300 PF00122 E1-E2 ATPase CBI29_02300 PF00690 Cation transporter/ATPase, N-terminus CBI29_02300 PF00702 haloacid dehalogenase-like hydrolase CBI29_02301 PF06271 CBI29_02301 CBI29_02304 PF00582 Universal stress protein family CBI29_02305 PF00005 ABC transporter CBI29_02308 PF03922 OmpW family CBI29_02309 PF00593 TonB dependent receptor CBI29_02309 PF07715 TonB-dependent Receptor Plug Domain CBI29_02310 PF13527 Acetyltransferase (GNAT) domain CBI29_02315 PF00924 Mechanosensitive ion channel CBI29_02316 PF00593 TonB dependent receptor CBI29_02316 PF07715 TonB-dependent Receptor Plug Domain CBI29_02317 PF00440 Bacterial regulatory proteins, tetR family CBI29_02322 PF01037 AsnC family CBI29_02322 PF13412 Winged helix-turn-helix DNA-binding CBI29_02323 PF01817 Chorismate mutase type II CBI29_02324 PF00106 short chain dehydrogenase CBI29_02325 PF00106 short chain dehydrogenase CBI29_02326 PF13417 Glutathione S-transferase, N-terminal domain CBI29_02326 PF14497 Glutathione S-transferase, C-terminal domain CBI29_02327 PF05229 CBI29_02327 CBI29_02328 PF00577 Outer membrane usher protein CBI29_02328 PF13953 PapC C-terminal domain CBI29_02329 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CBI29_02330 PF05229 CBI29_02330 CBI29_02331 PF01433 Peptidase family M1 CBI29_02331 PF11940 Domain of unknown function (DUF3458) CBI29_02331 PF17432 CBI29_02331 CBI29_02334 PF02110 Hydroxyethylthiazole kinase family CBI29_02335 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CBI29_02336 PF05970 CBI29_02336 CBI29_02336 PF14493 CBI29_02336 CBI29_02337 PF00465 Iron-containing alcohol dehydrogenase CBI29_02338 PF12146 Putative lysophospholipase CBI29_02340 PF00171 Aldehyde dehydrogenase family CBI29_02341 PF13520 Amino acid permease CBI29_02342 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CBI29_02343 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CBI29_02344 PF00117 Glutamine amidotransferase class-I CBI29_02345 PF00749 tRNA synthetases class I (E and Q), catalytic domain CBI29_02345 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CBI29_02346 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CBI29_02347 PF00149 Calcineurin-like phosphoesterase CBI29_02349 PF00881 Nitroreductase family CBI29_02350 PF00892 EamA-like transporter family CBI29_02351 PF17209 CBI29_02351 CBI29_02352 PF01715 IPP transferase CBI29_02353 PF01119 DNA mismatch repair protein, C-terminal domain CBI29_02353 PF08676 MutL C terminal dimerisation domain CBI29_02353 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_02354 PF02367 Uncharacterised P-loop hydrolase UPF0079 CBI29_02355 PF00849 RNA pseudouridylate synthase CBI29_02356 PF04221 RelB antitoxin CBI29_02357 PF00583 Acetyltransferase (GNAT) family CBI29_02358 PF00849 RNA pseudouridylate synthase CBI29_02358 PF01479 S4 domain CBI29_02360 PF04284 CBI29_02360 CBI29_02361 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_02361 PF03466 LysR substrate binding domain CBI29_02362 PF10670 CBI29_02362 CBI29_02364 PF07690 Major Facilitator Superfamily CBI29_02365 PF00520 Ion transport protein CBI29_02367 PF00330 Aconitase family (aconitate hydratase) CBI29_02367 PF06434 Aconitate hydratase 2 N-terminus CBI29_02367 PF11791 Aconitate B N-terminal domain CBI29_02369 PF04357 CBI29_02369 CBI29_02370 PF01103 Surface antigen CBI29_02370 PF07244 Surface antigen variable number repeat CBI29_02370 PF17243 CBI29_02370 CBI29_02371 PF07690 Major Facilitator Superfamily CBI29_02372 PF03232 CBI29_02372 CBI29_02373 PF10973 CBI29_02373 CBI29_02374 PF00120 Glutamine synthetase, catalytic domain CBI29_02375 PF00072 Response regulator receiver domain CBI29_02375 PF00486 Transcriptional regulatory protein, C terminal CBI29_02376 PF00512 His Kinase A (phospho-acceptor) domain CBI29_02376 PF00582 Universal stress protein family CBI29_02376 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_02376 PF02702 Osmosensitive K+ channel His kinase sensor domain CBI29_02376 PF13493 Domain of unknown function (DUF4118) CBI29_02377 PF02669 CBI29_02377 CBI29_02378 PF00122 E1-E2 ATPase CBI29_02378 PF00702 haloacid dehalogenase-like hydrolase CBI29_02379 PF03814 CBI29_02379 CBI29_02380 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CBI29_02381 PF02152 Dihydroneopterin aldolase CBI29_02382 PF03109 CBI29_02382 CBI29_02383 PF00899 ThiF family CBI29_02384 PF01613 Flavin reductase like domain CBI29_02385 PF00501 AMP-binding enzyme CBI29_02385 PF13193 AMP-binding enzyme C-terminal domain CBI29_02386 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_02386 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_02386 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_02387 PF00106 short chain dehydrogenase CBI29_02388 PF12625 CBI29_02388 CBI29_02388 PF12833 Helix-turn-helix domain CBI29_02389 PF09084 NMT1/THI5 like CBI29_02390 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_02391 PF05175 Methyltransferase small domain CBI29_02392 PF00472 RF-1 domain CBI29_02392 PF03462 PCRF domain CBI29_02393 PF17124 CBI29_02393 CBI29_02394 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_02394 PF03466 LysR substrate binding domain CBI29_02397 PF00296 Luciferase-like monooxygenase CBI29_02399 PF13994 CBI29_02399 CBI29_02400 PF13641 Glycosyltransferase like family 2 CBI29_02401 PF01522 Polysaccharide deacetylase CBI29_02401 PF14883 Hypothetical glycosyl hydrolase family 13 CBI29_02403 PF03618 CBI29_02403 CBI29_02404 PF00391 PEP-utilising enzyme, mobile domain CBI29_02404 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CBI29_02404 PF02896 PEP-utilising enzyme, TIM barrel domain CBI29_02405 PF06271 CBI29_02405 CBI29_02405 PF14237 CBI29_02405 CBI29_02406 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CBI29_02406 PF06481 COX Aromatic Rich Motif CBI29_02407 PF00115 Cytochrome C and Quinol oxidase polypeptide I CBI29_02408 PF00510 Cytochrome c oxidase subunit III CBI29_02409 PF03626 CBI29_02409 CBI29_02410 PF01040 UbiA prenyltransferase family CBI29_02411 PF01250 Ribosomal protein S6 CBI29_02412 PF01084 Ribosomal protein S18 CBI29_02413 PF01281 Ribosomal protein L9, N-terminal domain CBI29_02413 PF03948 Ribosomal protein L9, C-terminal domain CBI29_02414 PF00772 DnaB-like helicase N terminal domain CBI29_02414 PF03796 DnaB-like helicase C terminal domain CBI29_02415 PF00842 Alanine racemase, C-terminal domain CBI29_02415 PF01168 Alanine racemase, N-terminal domain CBI29_02416 PF00227 Proteasome subunit CBI29_02417 PF01841 Transglutaminase-like superfamily CBI29_02417 PF08379 CBI29_02417 CBI29_02418 PF04168 CBI29_02418 CBI29_02419 PF14403 CBI29_02419 CBI29_02420 PF13280 CBI29_02420 CBI29_02421 PF01134 Glucose inhibited division protein A CBI29_02421 PF13932 GidA associated domain 3 CBI29_02423 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CBI29_02424 PF11906 CBI29_02424 CBI29_02425 PF02954 Bacterial regulatory protein, Fis family CBI29_02426 PF01808 AICARFT/IMPCHase bienzyme CBI29_02426 PF02142 MGS-like domain CBI29_02427 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CBI29_02427 PF02843 Phosphoribosylglycinamide synthetase, C domain CBI29_02427 PF02844 Phosphoribosylglycinamide synthetase, N domain CBI29_02428 PF03180 NLPA lipoprotein CBI29_02429 PF00005 ABC transporter CBI29_02429 PF09383 NIL domain CBI29_02430 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_02431 PF00753 Metallo-beta-lactamase superfamily CBI29_02431 PF16123 CBI29_02431 CBI29_02433 PF00375 Sodium:dicarboxylate symporter family CBI29_02434 PF00440 Bacterial regulatory proteins, tetR family CBI29_02434 PF16859 CBI29_02434 CBI29_02435 PF07690 Major Facilitator Superfamily CBI29_02436 PF13673 Acetyltransferase (GNAT) domain CBI29_02437 PF07995 Glucose / Sorbosone dehydrogenase CBI29_02438 PF00892 EamA-like transporter family CBI29_02439 PF01177 Asp/Glu/Hydantoin racemase CBI29_02440 PF13302 Acetyltransferase (GNAT) domain CBI29_02442 PF16036 CBI29_02442 CBI29_02443 PF00072 Response regulator receiver domain CBI29_02443 PF00486 Transcriptional regulatory protein, C terminal CBI29_02444 PF00512 His Kinase A (phospho-acceptor) domain CBI29_02444 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_02445 PF02353 Mycolic acid cyclopropane synthetase CBI29_02446 PF06966 CBI29_02446 CBI29_02447 PF02353 Mycolic acid cyclopropane synthetase CBI29_02448 PF07103 CBI29_02448 CBI29_02449 PF13450 NAD(P)-binding Rossmann-like domain CBI29_02450 PF00487 CBI29_02450 CBI29_02451 PF08212 Lipocalin-like domain CBI29_02452 PF00512 His Kinase A (phospho-acceptor) domain CBI29_02452 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_02453 PF00072 Response regulator receiver domain CBI29_02453 PF00486 Transcriptional regulatory protein, C terminal CBI29_02454 PF03928 Domain of unknown function (DUF336) CBI29_02455 PF00576 HIUase/Transthyretin family CBI29_02456 PF03886 Protein of unknown function (DUF330) CBI29_02457 PF02470 CBI29_02457 CBI29_02458 PF04403 CBI29_02458 CBI29_02459 PF04403 CBI29_02459 CBI29_02460 PF00892 EamA-like transporter family CBI29_02461 PF00440 Bacterial regulatory proteins, tetR family CBI29_02462 PF00083 Sugar (and other) transporter CBI29_02462 PF08946 Osmosensory transporter coiled coil CBI29_02465 PF15428 CBI29_02465 CBI29_02466 PF05229 CBI29_02466 CBI29_02467 PF00577 Outer membrane usher protein CBI29_02467 PF13953 PapC C-terminal domain CBI29_02468 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CBI29_02469 PF05229 CBI29_02469 CBI29_02470 PF05229 CBI29_02470 CBI29_02471 PF05229 CBI29_02471 CBI29_02472 PF01609 Transposase DDE domain CBI29_02473 PF01609 Transposase DDE domain CBI29_02474 PF00440 Bacterial regulatory proteins, tetR family CBI29_02476 PF00392 Bacterial regulatory proteins, gntR family CBI29_02476 PF07729 FCD domain CBI29_02477 PF05673 Protein of unknown function (DUF815) CBI29_02478 PF10604 Polyketide cyclase / dehydrase and lipid transport CBI29_02479 PF13561 Enoyl-(Acyl carrier protein) reductase CBI29_02480 PF00248 Aldo/keto reductase family CBI29_02481 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_02481 PF03466 LysR substrate binding domain CBI29_02482 PF04199 Putative cyclase CBI29_02483 PF03616 CBI29_02483 CBI29_02484 PF00561 alpha/beta hydrolase fold CBI29_02485 PF02311 AraC-like ligand binding domain CBI29_02485 PF12833 Helix-turn-helix domain CBI29_02486 PF01810 CBI29_02486 CBI29_02488 PF04940 Sensors of blue-light using FAD CBI29_02489 PF04076 Bacterial OB fold (BOF) protein CBI29_02490 PF00535 Glycosyl transferase family 2 CBI29_02491 PF05401 Nodulation protein S (NodS) CBI29_02492 PF02585 GlcNAc-PI de-N-acetylase CBI29_02494 PF09939 CBI29_02494 CBI29_02495 PF00324 Amino acid permease CBI29_02496 PF00171 Aldehyde dehydrogenase family CBI29_02497 PF00202 Aminotransferase class-III CBI29_02498 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_02498 PF03466 LysR substrate binding domain CBI29_02503 PF00069 Protein kinase domain CBI29_02504 PF01734 Patatin-like phospholipase CBI29_02504 PF11815 CBI29_02504 CBI29_02505 PF05673 Protein of unknown function (DUF815) CBI29_02507 PF00814 Glycoprotease family CBI29_02508 PF01165 Ribosomal protein S21 CBI29_02509 PF09424 Yqey-like protein CBI29_02510 PF01435 Peptidase family M48 CBI29_02511 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CBI29_02511 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CBI29_02513 PF01435 Peptidase family M48 CBI29_02514 PF00156 Phosphoribosyl transferase domain CBI29_02514 PF13522 Glutamine amidotransferase domain CBI29_02515 PF02674 CBI29_02515 CBI29_02516 PF01180 Dihydroorotate dehydrogenase CBI29_02517 PF04612 Type II secretion system (T2SS), protein M CBI29_02518 PF05134 Type II secretion system (T2SS), protein L CBI29_02518 PF12693 GspL periplasmic domain CBI29_02519 PF00300 Histidine phosphatase superfamily (branch 1) CBI29_02520 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CBI29_02520 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CBI29_02521 PF00881 Nitroreductase family CBI29_02523 PF00270 DEAD/DEAH box helicase CBI29_02523 PF00271 Helicase conserved C-terminal domain CBI29_02524 PF00313 'Cold-shock' DNA-binding domain CBI29_02525 PF01206 Sulfurtransferase TusA CBI29_02526 PF00140 Sigma-70 factor, region 1 CBI29_02526 PF04542 Sigma-70 region 2 CBI29_02526 PF04545 Sigma-70, region 4 CBI29_02527 PF04241 CBI29_02527 CBI29_02528 PF02597 ThiS family CBI29_02529 PF05690 Thiazole biosynthesis protein ThiG CBI29_02530 PF03883 CBI29_02530 CBI29_02532 PF00753 Metallo-beta-lactamase superfamily CBI29_02533 PF01546 Peptidase family M20/M25/M40 CBI29_02533 PF07687 Peptidase dimerisation domain CBI29_02535 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CBI29_02535 PF02153 Prephenate dehydrogenase CBI29_02536 PF00800 Prephenate dehydratase CBI29_02536 PF01817 Chorismate mutase type II CBI29_02536 PF01842 ACT domain CBI29_02537 PF00756 Putative esterase CBI29_02538 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_02538 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_02538 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_02539 PF00375 Sodium:dicarboxylate symporter family CBI29_02540 PF00591 Glycosyl transferase family, a/b domain CBI29_02540 PF02885 Glycosyl transferase family, helical bundle domain CBI29_02541 PF07023 CBI29_02541 CBI29_02542 PF01513 ATP-NAD kinase CBI29_02543 PF00905 Penicillin binding protein transpeptidase domain CBI29_02543 PF00912 Transglycosylase CBI29_02543 PF14814 Bifunctional transglycosylase second domain CBI29_02545 PF00293 NUDIX domain CBI29_02545 PF02581 Thiamine monophosphate synthase/TENI CBI29_02546 PF10636 Hemin uptake protein hemP CBI29_02547 PF00512 His Kinase A (phospho-acceptor) domain CBI29_02547 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_02548 PF00072 Response regulator receiver domain CBI29_02548 PF00486 Transcriptional regulatory protein, C terminal CBI29_02549 PF04076 Bacterial OB fold (BOF) protein CBI29_02550 PF00437 Type II/IV secretion system protein CBI29_02550 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CBI29_02551 PF02308 CBI29_02551 CBI29_02551 PF13194 CBI29_02551 CBI29_02552 PF01980 Uncharacterised protein family UPF0066 CBI29_02553 PF00175 Oxidoreductase NAD-binding domain CBI29_02553 PF00970 Oxidoreductase FAD-binding domain CBI29_02554 PF02567 Phenazine biosynthesis-like protein CBI29_02555 PF00155 Aminotransferase class I and II CBI29_02555 PF00392 Bacterial regulatory proteins, gntR family CBI29_02556 PF01136 CBI29_02556 CBI29_02556 PF16325 CBI29_02556 CBI29_02558 PF00893 Small Multidrug Resistance protein CBI29_02559 PF00005 ABC transporter CBI29_02560 PF00005 ABC transporter CBI29_02561 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_02562 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_02563 PF00497 Bacterial extracellular solute-binding proteins, family 3 CBI29_02564 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_02564 PF03466 LysR substrate binding domain CBI29_02565 PF16576 CBI29_02565 CBI29_02566 PF00873 AcrB/AcrD/AcrF family CBI29_02567 PF02321 Outer membrane efflux protein CBI29_02568 PF00464 Serine hydroxymethyltransferase CBI29_02569 PF03583 Secretory lipase CBI29_02570 PF12843 CBI29_02570 CBI29_02573 PF15956 CBI29_02573 CBI29_02574 PF00959 Phage lysozyme CBI29_02579 PF08875 CBI29_02579 CBI29_02584 PF06120 CBI29_02584 CBI29_02586 PF14730 Domain of unknown function (DUF4468) with TBP-like fold CBI29_02588 PF10543 CBI29_02588 CBI29_02589 PF12686 CBI29_02589 CBI29_02595 PF13554 Bacteriophage related domain of unknown function CBI29_02600 PF10281 CBI29_02600 CBI29_02606 PF04233 CBI29_02606 CBI29_02607 PF13264 CBI29_02607 CBI29_02608 PF17289 CBI29_02608 CBI29_02609 PF10045 CBI29_02609 CBI29_02619 PF04480 Protein of unknown function (DUF559) CBI29_02628 PF00772 DnaB-like helicase N terminal domain CBI29_02628 PF03796 DnaB-like helicase C terminal domain CBI29_02629 PF04492 CBI29_02629 CBI29_02634 PF00717 Peptidase S24-like CBI29_02634 PF01381 Helix-turn-helix CBI29_02643 PF12684 PDDEXK-like domain of unknown function (DUF3799) CBI29_02651 PF00589 Phage integrase family CBI29_02652 PF00005 ABC transporter CBI29_02653 PF01061 CBI29_02653 CBI29_02654 PF14489 QueF-like protein CBI29_02654 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CBI29_02656 PF01098 CBI29_02656 CBI29_02657 PF13406 Transglycosylase SLT domain CBI29_02658 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel CBI29_02659 PF06127 CBI29_02659 CBI29_02660 PF05437 CBI29_02660 CBI29_02661 PF03591 CBI29_02661 CBI29_02662 PF02311 AraC-like ligand binding domain CBI29_02662 PF12833 Helix-turn-helix domain CBI29_02663 PF11948 CBI29_02663 CBI29_02664 PF00889 Elongation factor TS CBI29_02665 PF00318 Ribosomal protein S2 CBI29_02666 PF00557 Metallopeptidase family M24 CBI29_02667 PF03922 OmpW family CBI29_02668 PF07690 Major Facilitator Superfamily CBI29_02669 PF07690 Major Facilitator Superfamily CBI29_02671 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CBI29_02671 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_02672 PF04055 Radical SAM superfamily CBI29_02672 PF16881 CBI29_02672 CBI29_02673 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_02673 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_02673 PF09317 CBI29_02673 CBI29_02674 PF02627 Carboxymuconolactone decarboxylase family CBI29_02675 PF03412 Peptidase C39 family CBI29_02676 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CBI29_02676 PF05221 S-adenosyl-L-homocysteine hydrolase CBI29_02677 PF02219 Methylenetetrahydrofolate reductase CBI29_02678 PF04452 RNA methyltransferase CBI29_02679 PF00563 EAL domain CBI29_02679 PF00989 PAS fold CBI29_02679 PF00990 GGDEF domain CBI29_02679 PF08447 PAS fold CBI29_02680 PF00390 Malic enzyme, N-terminal domain CBI29_02680 PF01515 Phosphate acetyl/butaryl transferase CBI29_02680 PF03949 Malic enzyme, NAD binding domain CBI29_02681 PF01743 Poly A polymerase head domain CBI29_02681 PF12627 Probable RNA and SrmB- binding site of polymerase A CBI29_02682 PF13180 PDZ domain CBI29_02682 PF13365 Trypsin-like peptidase domain CBI29_02683 PF01784 NIF3 (NGG1p interacting factor 3) CBI29_02684 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CBI29_02684 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CBI29_02688 PF10881 CBI29_02688 CBI29_02690 PF03583 Secretory lipase CBI29_02691 PF01040 UbiA prenyltransferase family CBI29_02692 PF04345 Chorismate lyase CBI29_02693 PF00120 Glutamine synthetase, catalytic domain CBI29_02693 PF03951 Glutamine synthetase, beta-Grasp domain CBI29_02694 PF00854 POT family CBI29_02695 PF00557 Metallopeptidase family M24 CBI29_02695 PF01321 Creatinase/Prolidase N-terminal domain CBI29_02695 PF16188 CBI29_02695 CBI29_02695 PF16189 CBI29_02695 CBI29_02696 PF00117 Glutamine amidotransferase class-I CBI29_02697 PF01433 Peptidase family M1 CBI29_02697 PF11838 ERAP1-like C-terminal domain CBI29_02698 PF00593 TonB dependent receptor CBI29_02698 PF07715 TonB-dependent Receptor Plug Domain CBI29_02699 PF00591 Glycosyl transferase family, a/b domain CBI29_02699 PF02885 Glycosyl transferase family, helical bundle domain CBI29_02700 PF00218 Indole-3-glycerol phosphate synthase CBI29_02701 PF01713 Smr domain CBI29_02702 PF02625 XdhC and CoxI family CBI29_02702 PF13478 XdhC Rossmann domain CBI29_02703 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CBI29_02703 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CBI29_02704 PF00941 FAD binding domain in molybdopterin dehydrogenase CBI29_02704 PF01799 [2Fe-2S] binding domain CBI29_02704 PF03450 CO dehydrogenase flavoprotein C-terminal domain CBI29_02705 PF01227 GTP cyclohydrolase I CBI29_02706 PF00144 Beta-lactamase CBI29_02707 PF13387 CBI29_02707 CBI29_02708 PF11220 CBI29_02708 CBI29_02709 PF05675 CBI29_02709 CBI29_02710 PF01208 Uroporphyrinogen decarboxylase (URO-D) CBI29_02711 PF01471 Putative peptidoglycan binding domain CBI29_02711 PF03734 L,D-transpeptidase catalytic domain CBI29_02712 PF00425 chorismate binding enzyme CBI29_02713 PF01648 4'-phosphopantetheinyl transferase superfamily CBI29_02714 PF00975 Thioesterase domain CBI29_02715 PF00005 ABC transporter CBI29_02715 PF00664 ABC transporter transmembrane region CBI29_02716 PF00005 ABC transporter CBI29_02716 PF00664 ABC transporter transmembrane region CBI29_02718 PF00282 Pyridoxal-dependent decarboxylase conserved domain CBI29_02719 PF00550 Phosphopantetheine attachment site CBI29_02719 PF00857 Isochorismatase family CBI29_02720 PF00501 AMP-binding enzyme CBI29_02720 PF13193 AMP-binding enzyme C-terminal domain CBI29_02721 PF00668 Condensation domain CBI29_02722 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CBI29_02723 PF07715 TonB-dependent Receptor Plug Domain CBI29_02724 PF01497 Periplasmic binding protein CBI29_02725 PF00005 ABC transporter CBI29_02726 PF01032 FecCD transport family CBI29_02727 PF01032 FecCD transport family CBI29_02730 PF00550 Phosphopantetheine attachment site CBI29_02730 PF00668 Condensation domain CBI29_02731 PF00501 AMP-binding enzyme CBI29_02731 PF13193 AMP-binding enzyme C-terminal domain CBI29_02732 PF04954 Siderophore-interacting protein CBI29_02732 PF08021 Siderophore-interacting FAD-binding domain CBI29_02733 PF08348 CBI29_02733 CBI29_02733 PF13309 CBI29_02733 CBI29_02734 PF00291 Pyridoxal-phosphate dependent enzyme CBI29_02735 PF02678 Pirin CBI29_02736 PF00440 Bacterial regulatory proteins, tetR family CBI29_02739 PF00440 Bacterial regulatory proteins, tetR family CBI29_02740 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CBI29_02741 PF00892 EamA-like transporter family CBI29_02742 PF00892 EamA-like transporter family CBI29_02743 PF01914 CBI29_02743 CBI29_02745 PF06249 Ethanolamine utilisation protein EutQ CBI29_02746 PF01266 FAD dependent oxidoreductase CBI29_02747 PF00301 Rubredoxin CBI29_02747 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_02748 PF00171 Aldehyde dehydrogenase family CBI29_02749 PF00355 Rieske [2Fe-2S] domain CBI29_02749 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CBI29_02750 PF02028 BCCT family transporter CBI29_02751 PF02028 BCCT family transporter CBI29_02752 PF00557 Metallopeptidase family M24 CBI29_02752 PF01321 Creatinase/Prolidase N-terminal domain CBI29_02753 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_02753 PF03466 LysR substrate binding domain CBI29_02755 PF04328 CBI29_02755 CBI29_02756 PF02554 CBI29_02756 CBI29_02756 PF13722 CBI29_02756 CBI29_02757 PF01132 Elongation factor P (EF-P) OB domain CBI29_02757 PF08207 Elongation factor P (EF-P) KOW-like domain CBI29_02757 PF09285 Elongation factor P, C-terminal CBI29_02758 PF04055 Radical SAM superfamily CBI29_02758 PF13394 4Fe-4S single cluster domain CBI29_02760 PF00563 EAL domain CBI29_02761 PF01197 Ribosomal protein L31 CBI29_02762 PF13593 SBF-like CPA transporter family (DUF4137) CBI29_02763 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CBI29_02764 PF07690 Major Facilitator Superfamily CBI29_02765 PF05362 Lon protease (S16) C-terminal proteolytic domain CBI29_02765 PF13654 AAA domain CBI29_02766 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_02766 PF03466 LysR substrate binding domain CBI29_02767 PF01476 LysM domain CBI29_02767 PF01551 Peptidase family M23 CBI29_02768 PF01975 Survival protein SurE CBI29_02771 PF00768 D-alanyl-D-alanine carboxypeptidase CBI29_02771 PF07943 Penicillin-binding protein 5, C-terminal domain CBI29_02772 PF00132 Bacterial transferase hexapeptide (six repeats) CBI29_02773 PF00293 NUDIX domain CBI29_02774 PF03054 tRNA methyl transferase CBI29_02775 PF04356 Protein of unknown function (DUF489) CBI29_02776 PF00206 Lyase CBI29_02776 PF08328 Adenylosuccinate lyase C-terminal CBI29_02777 PF09997 CBI29_02777 CBI29_02779 PF01343 Peptidase family S49 CBI29_02779 PF08496 CBI29_02779 CBI29_02780 PF00005 ABC transporter CBI29_02781 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_02781 PF11812 CBI29_02781 CBI29_02782 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_02782 PF12501 CBI29_02782 CBI29_02783 PF12849 PBP superfamily domain CBI29_02784 PF00324 Amino acid permease CBI29_02785 PF00205 Thiamine pyrophosphate enzyme, central domain CBI29_02785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CBI29_02785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CBI29_02786 PF01037 AsnC family CBI29_02786 PF13404 AsnC-type helix-turn-helix domain CBI29_02787 PF00171 Aldehyde dehydrogenase family CBI29_02788 PF00282 Pyridoxal-dependent decarboxylase conserved domain CBI29_02789 PF00202 Aminotransferase class-III CBI29_02790 PF04402 Protein of unknown function (DUF541) CBI29_02791 PF00440 Bacterial regulatory proteins, tetR family CBI29_02792 PF14539 Domain of unknown function (DUF4442) CBI29_02793 PF00487 CBI29_02793 CBI29_02794 PF00175 Oxidoreductase NAD-binding domain CBI29_02794 PF00970 Oxidoreductase FAD-binding domain CBI29_02795 PF00440 Bacterial regulatory proteins, tetR family CBI29_02796 PF01594 CBI29_02796 CBI29_02797 PF00176 SNF2 family N-terminal domain CBI29_02797 PF00271 Helicase conserved C-terminal domain CBI29_02797 PF12137 RNA polymerase recycling family C-terminal CBI29_02798 PF00849 RNA pseudouridylate synthase CBI29_02800 PF00202 Aminotransferase class-III CBI29_02801 PF02581 Thiamine monophosphate synthase/TENI CBI29_02802 PF09618 CRISPR-associated protein (Cas_Csy4) CBI29_02803 PF09615 CBI29_02803 CBI29_02804 PF09614 CBI29_02804 CBI29_02805 PF09611 CBI29_02805 CBI29_02807 PF01867 CRISPR associated protein Cas1 CBI29_02808 PF06127 CBI29_02808 CBI29_02809 PF01928 CYTH domain CBI29_02809 PF05235 CHAD domain CBI29_02811 PF11342 Protein of unknown function (DUF3144) CBI29_02812 PF00675 Insulinase (Peptidase family M16) CBI29_02812 PF05193 Peptidase M16 inactive domain CBI29_02813 PF02567 Phenazine biosynthesis-like protein CBI29_02814 PF00375 Sodium:dicarboxylate symporter family CBI29_02815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_02815 PF03466 LysR substrate binding domain CBI29_02816 PF06779 CBI29_02816 CBI29_02820 PF00180 Isocitrate/isopropylmalate dehydrogenase CBI29_02821 PF00849 RNA pseudouridylate synthase CBI29_02822 PF03971 Monomeric isocitrate dehydrogenase CBI29_02823 PF05299 M61 glycyl aminopeptidase CBI29_02824 PF00768 D-alanyl-D-alanine carboxypeptidase CBI29_02825 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_02826 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CBI29_02827 PF00875 DNA photolyase CBI29_02827 PF03441 FAD binding domain of DNA photolyase CBI29_02830 PF13641 Glycosyltransferase like family 2 CBI29_02833 PF02350 UDP-N-acetylglucosamine 2-epimerase CBI29_02835 PF01988 CBI29_02835 CBI29_02836 PF03060 Nitronate monooxygenase CBI29_02837 PF01207 Dihydrouridine synthase (Dus) CBI29_02838 PF07759 CBI29_02838 CBI29_02839 PF12710 haloacid dehalogenase-like hydrolase CBI29_02840 PF00696 Amino acid kinase family CBI29_02840 PF01472 PUA domain CBI29_02841 PF01018 GTP1/OBG CBI29_02841 PF01926 50S ribosome-binding GTPase CBI29_02844 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CBI29_02844 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CBI29_02845 PF00892 EamA-like transporter family CBI29_02846 PF08212 Lipocalin-like domain CBI29_02847 PF00271 Helicase conserved C-terminal domain CBI29_02847 PF02151 UvrB/uvrC motif CBI29_02847 PF04851 Type III restriction enzyme, res subunit CBI29_02847 PF12344 Ultra-violet resistance protein B CBI29_02849 PF00990 GGDEF domain CBI29_02849 PF13188 PAS domain CBI29_02851 PF00155 Aminotransferase class I and II CBI29_02852 PF04828 Glutathione-dependent formaldehyde-activating enzyme CBI29_02853 PF03061 Thioesterase superfamily CBI29_02856 PF00106 short chain dehydrogenase CBI29_02857 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CBI29_02858 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CBI29_02859 PF02565 Recombination protein O C terminal CBI29_02859 PF11967 Recombination protein O N terminal CBI29_02861 PF01926 50S ribosome-binding GTPase CBI29_02861 PF07650 KH domain CBI29_02862 PF00035 Double-stranded RNA binding motif CBI29_02862 PF14622 Ribonuclease-III-like CBI29_02863 PF16137 CBI29_02863 CBI29_02864 PF00717 Peptidase S24-like CBI29_02864 PF10502 Signal peptidase, peptidase S26 CBI29_02865 PF00009 Elongation factor Tu GTP binding domain CBI29_02865 PF00679 Elongation factor G C-terminus CBI29_02865 PF03144 Elongation factor Tu domain 2 CBI29_02865 PF06421 GTP-binding protein LepA C-terminus CBI29_02866 PF13279 Thioesterase-like superfamily CBI29_02867 PF13180 PDZ domain CBI29_02867 PF13365 Trypsin-like peptidase domain CBI29_02868 PF00890 FAD binding domain CBI29_02868 PF02910 Fumarate reductase flavoprotein C-term CBI29_02869 PF03061 Thioesterase superfamily CBI29_02870 PF02223 Thymidylate kinase CBI29_02871 PF02618 YceG-like family CBI29_02872 PF01063 Aminotransferase class IV CBI29_02873 PF13531 Bacterial extracellular solute-binding protein CBI29_02874 PF06821 Serine hydrolase CBI29_02875 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_02876 PF00528 Binding-protein-dependent transport system inner membrane component CBI29_02877 PF00005 ABC transporter CBI29_02877 PF12857 CBI29_02877 CBI29_02878 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_02878 PF03466 LysR substrate binding domain CBI29_02880 PF00132 Bacterial transferase hexapeptide (six repeats) CBI29_02880 PF14602 Hexapeptide repeat of succinyl-transferase CBI29_02880 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CBI29_02881 PF04055 Radical SAM superfamily CBI29_02881 PF13394 4Fe-4S single cluster domain CBI29_02882 PF06508 Queuosine biosynthesis protein QueC CBI29_02884 PF01902 ATP-binding region CBI29_02885 PF00578 AhpC/TSA family CBI29_02886 PF00188 Cysteine-rich secretory protein family CBI29_02887 PF01467 Cytidylyltransferase CBI29_02888 PF00378 Enoyl-CoA hydratase/isomerase family CBI29_02891 PF07690 Major Facilitator Superfamily CBI29_02892 PF02769 AIR synthase related protein, C-terminal domain CBI29_02892 PF13507 CobB/CobQ-like glutamine amidotransferase domain CBI29_02893 PF01966 HD domain CBI29_02894 PF01330 RuvA N terminal domain CBI29_02894 PF07499 RuvA, C-terminal domain CBI29_02894 PF14520 Helix-hairpin-helix domain CBI29_02895 PF05491 Holliday junction DNA helicase ruvB C-terminus CBI29_02895 PF05496 Holliday junction DNA helicase ruvB N-terminus CBI29_02896 PF01546 Peptidase family M20/M25/M40 CBI29_02896 PF07687 Peptidase dimerisation domain CBI29_02897 PF03061 Thioesterase superfamily CBI29_02898 PF01618 CBI29_02898 CBI29_02899 PF02472 Biopolymer transport protein ExbD/TolR CBI29_02900 PF13103 TonB C terminal CBI29_02901 PF04052 TolB amino-terminal domain CBI29_02901 PF07676 WD40-like Beta Propeller Repeat CBI29_02902 PF00691 OmpA family CBI29_02904 PF00316 Fructose-1-6-bisphosphatase CBI29_02905 PF00588 SpoU rRNA Methylase family CBI29_02906 PF04542 Sigma-70 region 2 CBI29_02906 PF08281 Sigma-70, region 4 CBI29_02908 PF11304 CBI29_02908 CBI29_02911 PF00308 Bacterial dnaA protein CBI29_02912 PF01594 CBI29_02912 CBI29_02913 PF00586 AIR synthase related protein, N-terminal domain CBI29_02913 PF02769 AIR synthase related protein, C-terminal domain CBI29_02914 PF00551 Formyl transferase CBI29_02915 PF12697 Alpha/beta hydrolase family CBI29_02916 PF01343 Peptidase family S49 CBI29_02917 PF03279 CBI29_02917 CBI29_02918 PF00753 Metallo-beta-lactamase superfamily CBI29_02918 PF03772 CBI29_02918 CBI29_02918 PF13567 CBI29_02918 CBI29_02919 PF00005 ABC transporter CBI29_02920 PF02687 CBI29_02920 CBI29_02920 PF12704 MacB-like periplasmic core domain CBI29_02921 PF00892 EamA-like transporter family CBI29_02922 PF02639 CBI29_02922 CBI29_02925 PF00266 Aminotransferase class-V CBI29_02926 PF02321 Outer membrane efflux protein CBI29_02927 PF16576 CBI29_02927 CBI29_02928 PF12698 ABC-2 family transporter protein CBI29_02929 PF12698 ABC-2 family transporter protein CBI29_02930 PF04794 YdjC-like protein CBI29_02931 PF00535 Glycosyl transferase family 2 CBI29_02932 PF04138 CBI29_02932 CBI29_02933 PF13231 CBI29_02933 CBI29_02934 PF00521 DNA gyrase/topoisomerase IV, subunit A CBI29_02934 PF03989 DNA gyrase C-terminal domain, beta-propeller CBI29_02935 PF00766 Electron transfer flavoprotein FAD-binding domain CBI29_02935 PF01012 Electron transfer flavoprotein domain CBI29_02936 PF01012 Electron transfer flavoprotein domain CBI29_02937 PF00589 Phage integrase family CBI29_02937 PF02899 Phage integrase, N-terminal SAM-like domain CBI29_02938 PF01810 CBI29_02938 CBI29_02939 PF00561 alpha/beta hydrolase fold CBI29_02940 PF01678 Diaminopimelate epimerase CBI29_02941 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CBI29_02941 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CBI29_02943 PF00324 Amino acid permease CBI29_02944 PF06745 KaiC CBI29_02944 PF13541 Subunit ChlI of Mg-chelatase CBI29_02945 PF04280 Tim44-like domain CBI29_02946 PF00152 tRNA synthetases class II (D, K and N) CBI29_02947 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CBI29_02947 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CBI29_02947 PF11890 Domain of unknown function (DUF3410) CBI29_02948 PF06803 CBI29_02948 CBI29_02949 PF02634 FdhD/NarQ family CBI29_02950 PF00384 Molybdopterin oxidoreductase CBI29_02950 PF01568 Molydopterin dinucleotide binding domain CBI29_02951 PF02595 Glycerate kinase family CBI29_02952 PF00440 Bacterial regulatory proteins, tetR family CBI29_02953 PF00106 short chain dehydrogenase CBI29_02954 PF00881 Nitroreductase family CBI29_02955 PF00440 Bacterial regulatory proteins, tetR family CBI29_02961 PF00501 AMP-binding enzyme CBI29_02961 PF00550 Phosphopantetheine attachment site CBI29_02961 PF13193 AMP-binding enzyme C-terminal domain CBI29_02962 PF14534 Domain of unknown function (DUF4440) CBI29_02964 PF01272 Transcription elongation factor, GreA/GreB, C-term CBI29_02964 PF03449 Transcription elongation factor, N-terminal CBI29_02965 PF00497 Bacterial extracellular solute-binding proteins, family 3 CBI29_02965 PF01464 Transglycosylase SLT domain CBI29_02966 PF02036 SCP-2 sterol transfer family CBI29_02967 PF01171 PP-loop family CBI29_02968 PF01464 Transglycosylase SLT domain CBI29_02969 PF01435 Peptidase family M48 CBI29_02970 PF13430 CBI29_02970 CBI29_02971 PF00873 AcrB/AcrD/AcrF family CBI29_02972 PF03009 Glycerophosphoryl diester phosphodiesterase family CBI29_02973 PF00753 Metallo-beta-lactamase superfamily CBI29_02974 PF01219 Prokaryotic diacylglycerol kinase CBI29_02975 PF00118 TCP-1/cpn60 chaperonin family CBI29_02976 PF00166 Chaperonin 10 Kd subunit CBI29_02977 PF12245 Bacterial Ig-like domain (group 3) CBI29_02978 PF00149 Calcineurin-like phosphoesterase CBI29_02979 PF00781 Diacylglycerol kinase catalytic domain CBI29_02980 PF00821 Phosphoenolpyruvate carboxykinase CBI29_02980 PF17297 CBI29_02980 CBI29_02981 PF01266 FAD dependent oxidoreductase CBI29_02981 PF16901 CBI29_02981 CBI29_02982 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CBI29_02982 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CBI29_02983 PF00083 Sugar (and other) transporter CBI29_02985 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CBI29_02986 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CBI29_02986 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CBI29_02989 PF09423 PhoD-like phosphatase CBI29_02989 PF16655 CBI29_02989 CBI29_02993 PF00809 Pterin binding enzyme CBI29_02994 PF00004 ATPase family associated with various cellular activities (AAA) CBI29_02994 PF01434 Peptidase family M41 CBI29_02994 PF06480 FtsH Extracellular CBI29_02995 PF01728 FtsJ-like methyltransferase CBI29_02996 PF01985 CRS1 / YhbY (CRM) domain CBI29_02999 PF00117 Glutamine amidotransferase class-I CBI29_02999 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CBI29_03000 PF02142 MGS-like domain CBI29_03000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CBI29_03000 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CBI29_03001 PF01272 Transcription elongation factor, GreA/GreB, C-term CBI29_03001 PF03449 Transcription elongation factor, N-terminal CBI29_03002 PF00132 Bacterial transferase hexapeptide (six repeats) CBI29_03003 PF00582 Universal stress protein family CBI29_03004 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CBI29_03006 PF09587 Bacterial capsule synthesis protein PGA_cap CBI29_03009 PF13737 CBI29_03009 CBI29_03010 PF00999 Sodium/hydrogen exchanger family CBI29_03011 PF04228 CBI29_03011 CBI29_03012 PF05661 CBI29_03012 CBI29_03013 PF00579 tRNA synthetases class I (W and Y) CBI29_03016 PF00549 CoA-ligase CBI29_03016 PF02629 CoA binding domain CBI29_03017 PF00549 CoA-ligase CBI29_03017 PF08442 ATP-grasp domain CBI29_03018 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CBI29_03018 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_03019 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CBI29_03019 PF00364 Biotin-requiring enzyme CBI29_03019 PF02817 e3 binding domain CBI29_03020 PF00676 Dehydrogenase E1 component CBI29_03020 PF02779 Transketolase, pyrimidine binding domain CBI29_03020 PF16078 CBI29_03020 CBI29_03020 PF16870 CBI29_03020 CBI29_03021 PF13085 2Fe-2S iron-sulfur cluster binding domain CBI29_03021 PF13534 4Fe-4S dicluster domain CBI29_03022 PF00890 FAD binding domain CBI29_03022 PF02910 Fumarate reductase flavoprotein C-term CBI29_03023 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CBI29_03024 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CBI29_03025 PF00285 Citrate synthase CBI29_03026 PF06945 CBI29_03026 CBI29_03027 PF00581 Rhodanese-like domain CBI29_03028 PF03695 Uncharacterised protein family (UPF0149) CBI29_03030 PF00140 Sigma-70 factor, region 1 CBI29_03030 PF03979 Sigma-70 factor, region 1 CBI29_03030 PF04539 Sigma-70 region 3 CBI29_03030 PF04542 Sigma-70 region 2 CBI29_03030 PF04545 Sigma-70, region 4 CBI29_03030 PF04546 Sigma-70, non-essential region CBI29_03031 PF04359 Protein of unknown function (DUF493) CBI29_03032 PF03099 Biotin/lipoate A/B protein ligase family CBI29_03034 PF00465 Iron-containing alcohol dehydrogenase CBI29_03035 PF00324 Amino acid permease CBI29_03036 PF12724 Flavodoxin domain CBI29_03037 PF01638 HxlR-like helix-turn-helix CBI29_03038 PF00588 SpoU rRNA Methylase family CBI29_03039 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CBI29_03039 PF10414 Sirohaem synthase dimerisation region CBI29_03039 PF13241 Putative NAD(P)-binding CBI29_03040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CBI29_03040 PF02403 Seryl-tRNA synthetase N-terminal domain CBI29_03041 PF11738 Protein of unknown function (DUF3298) CBI29_03042 PF03548 Outer membrane lipoprotein carrier protein LolA CBI29_03043 PF01016 Ribosomal L27 protein CBI29_03044 PF00829 Ribosomal prokaryotic L21 protein CBI29_03045 PF00348 Polyprenyl synthetase CBI29_03046 PF10136 CBI29_03046 CBI29_03047 PF01569 PAP2 superfamily CBI29_03048 PF00529 HlyD family secretion protein CBI29_03048 PF16576 CBI29_03048 CBI29_03049 PF00873 AcrB/AcrD/AcrF family CBI29_03050 PF02321 Outer membrane efflux protein CBI29_03051 PF01906 Putative heavy-metal-binding CBI29_03052 PF01906 Putative heavy-metal-binding CBI29_03053 PF13577 SnoaL-like domain CBI29_03054 PF00106 short chain dehydrogenase CBI29_03056 PF00133 tRNA synthetases class I (I, L, M and V) CBI29_03056 PF08264 Anticodon-binding domain of tRNA CBI29_03056 PF10458 Valyl tRNA synthetase tRNA binding arm CBI29_03059 PF03547 CBI29_03059 CBI29_03060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_03060 PF03466 LysR substrate binding domain CBI29_03061 PF00909 Ammonium Transporter Family CBI29_03062 PF01569 PAP2 superfamily CBI29_03063 PF00512 His Kinase A (phospho-acceptor) domain CBI29_03063 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_03064 PF00072 Response regulator receiver domain CBI29_03064 PF00486 Transcriptional regulatory protein, C terminal CBI29_03065 PF00884 Sulfatase CBI29_03065 PF08019 CBI29_03065 CBI29_03066 PF02530 CBI29_03066 CBI29_03067 PF13000 CBI29_03067 CBI29_03068 PF01553 Acyltransferase CBI29_03069 PF01734 Patatin-like phospholipase CBI29_03070 PF01957 NfeD-like C-terminal, partner-binding CBI29_03071 PF01145 SPFH domain / Band 7 family CBI29_03072 PF04237 YjbR CBI29_03073 PF00348 Polyprenyl synthetase CBI29_03074 PF04303 PrpF protein CBI29_03075 PF00324 Amino acid permease CBI29_03077 PF00589 Phage integrase family CBI29_03077 PF13356 Domain of unknown function (DUF4102) CBI29_03082 PF05838 Glycosyl hydrolase 108 CBI29_03082 PF09374 Predicted Peptidoglycan domain CBI29_03086 PF08875 CBI29_03086 CBI29_03091 PF04383 KilA-N domain CBI29_03092 PF03869 Arc-like DNA binding domain CBI29_03093 PF03869 Arc-like DNA binding domain CBI29_03096 PF14020 CBI29_03096 CBI29_03097 PF12844 Helix-turn-helix domain CBI29_03098 PF14076 CBI29_03098 CBI29_03104 PF13554 Bacteriophage related domain of unknown function CBI29_03109 PF12949 HeH/LEM domain CBI29_03112 PF13876 CBI29_03112 CBI29_03115 PF04233 CBI29_03115 CBI29_03116 PF13264 CBI29_03116 CBI29_03117 PF03237 Terminase-like family CBI29_03117 PF17289 CBI29_03117 CBI29_03118 PF10045 CBI29_03118 CBI29_03123 PF04607 Region found in RelA / SpoT proteins CBI29_03129 PF00149 Calcineurin-like phosphoesterase CBI29_03130 PF08774 VRR-NUC domain CBI29_03139 PF00772 DnaB-like helicase N terminal domain CBI29_03139 PF03796 DnaB-like helicase C terminal domain CBI29_03140 PF00392 Bacterial regulatory proteins, gntR family CBI29_03143 PF14549 DNA-binding transcriptional regulator Cro CBI29_03144 PF00717 Peptidase S24-like CBI29_03144 PF01381 Helix-turn-helix CBI29_03146 PF02384 N-6 DNA Methylase CBI29_03158 PF05930 Prophage CP4-57 regulatory protein (AlpA) CBI29_03159 PF01965 DJ-1/PfpI family CBI29_03160 PF00107 Zinc-binding dehydrogenase CBI29_03160 PF08240 Alcohol dehydrogenase GroES-like domain CBI29_03161 PF06719 CBI29_03161 CBI29_03161 PF12833 Helix-turn-helix domain CBI29_03162 PF02673 CBI29_03162 CBI29_03163 PF08223 PaaX-like protein C-terminal domain CBI29_03164 PF00487 CBI29_03164 CBI29_03165 PF12625 CBI29_03165 CBI29_03165 PF12833 Helix-turn-helix domain CBI29_03166 PF02525 Flavodoxin-like fold CBI29_03167 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CBI29_03168 PF12710 haloacid dehalogenase-like hydrolase CBI29_03169 PF01507 Phosphoadenosine phosphosulfate reductase family CBI29_03170 PF03007 CBI29_03170 CBI29_03170 PF06974 CBI29_03170 CBI29_03172 PF00575 S1 RNA binding domain CBI29_03172 PF10150 Ribonuclease E/G family CBI29_03173 PF02545 Maf-like protein CBI29_03174 PF04093 CBI29_03174 CBI29_03175 PF04085 rod shape-determining protein MreC CBI29_03176 PF06723 MreB/Mbl protein CBI29_03177 PF02686 Glu-tRNAGln amidotransferase C subunit CBI29_03178 PF01425 Amidase CBI29_03179 PF02637 GatB domain CBI29_03179 PF02934 GatB/GatE catalytic domain CBI29_03180 PF01965 DJ-1/PfpI family CBI29_03182 PF06674 CBI29_03182 CBI29_03183 PF16142 CBI29_03183 CBI29_03184 PF05992 CBI29_03184 CBI29_03185 PF00291 Pyridoxal-phosphate dependent enzyme CBI29_03186 PF01734 Patatin-like phospholipase CBI29_03187 PF01235 CBI29_03187 CBI29_03189 PF00881 Nitroreductase family CBI29_03190 PF07690 Major Facilitator Superfamily CBI29_03191 PF12805 CBI29_03191 CBI29_03191 PF13515 CBI29_03191 CBI29_03192 PF14317 CBI29_03192 CBI29_03193 PF00175 Oxidoreductase NAD-binding domain CBI29_03193 PF00258 Flavodoxin CBI29_03193 PF03929 CBI29_03193 CBI29_03194 PF02698 DUF218 domain CBI29_03201 PF03734 L,D-transpeptidase catalytic domain CBI29_03202 PF04304 CBI29_03202 CBI29_03203 PF08907 CBI29_03203 CBI29_03204 PF08085 CBI29_03204 CBI29_03205 PF01546 Peptidase family M20/M25/M40 CBI29_03205 PF07687 Peptidase dimerisation domain CBI29_03206 PF12146 Putative lysophospholipase CBI29_03207 PF04055 Radical SAM superfamily CBI29_03209 PF00072 Response regulator receiver domain CBI29_03209 PF01584 CheW-like domain CBI29_03209 PF01627 Hpt domain CBI29_03209 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_03210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CBI29_03211 PF01584 CheW-like domain CBI29_03212 PF00072 Response regulator receiver domain CBI29_03213 PF00072 Response regulator receiver domain CBI29_03215 PF13437 HlyD family secretion protein CBI29_03215 PF13533 Biotin-lipoyl like CBI29_03216 PF00873 AcrB/AcrD/AcrF family CBI29_03217 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CBI29_03217 PF03129 Anticodon binding domain CBI29_03217 PF04073 Aminoacyl-tRNA editing domain CBI29_03218 PF07411 Domain of unknown function (DUF1508) CBI29_03219 PF03831 PhnA protein CBI29_03219 PF08274 PhnA Zinc-Ribbon CBI29_03220 PF04343 CBI29_03220 CBI29_03221 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CBI29_03222 PF01571 Aminomethyltransferase folate-binding domain CBI29_03223 PF10411 Disulfide bond isomerase protein N-terminus CBI29_03223 PF13098 Thioredoxin-like domain CBI29_03224 PF08238 Sel1 repeat CBI29_03225 PF03547 CBI29_03225 CBI29_03226 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CBI29_03227 PF00593 TonB dependent receptor CBI29_03227 PF07715 TonB-dependent Receptor Plug Domain CBI29_03228 PF02245 Methylpurine-DNA glycosylase (MPG) CBI29_03229 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CBI29_03229 PF06827 Zinc finger found in FPG and IleRS CBI29_03229 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CBI29_03230 PF00639 PPIC-type PPIASE domain CBI29_03231 PF06094 AIG2-like family CBI29_03232 PF01741 Large-conductance mechanosensitive channel, MscL CBI29_03233 PF00009 Elongation factor Tu GTP binding domain CBI29_03233 PF00679 Elongation factor G C-terminus CBI29_03233 PF03144 Elongation factor Tu domain 2 CBI29_03234 PF00860 Permease family CBI29_03235 PF05175 Methyltransferase small domain CBI29_03235 PF08468 Methyltransferase small domain N-terminal CBI29_03236 PF00324 Amino acid permease CBI29_03237 PF01139 tRNA-splicing ligase RtcB CBI29_03239 PF00691 OmpA family CBI29_03239 PF13505 Outer membrane protein beta-barrel domain CBI29_03240 PF12019 Type II transport protein GspH CBI29_03241 PF00108 Thiolase, N-terminal domain CBI29_03241 PF02803 Thiolase, C-terminal domain CBI29_03242 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CBI29_03243 PF00893 Small Multidrug Resistance protein CBI29_03244 PF06073 CBI29_03244 CBI29_03245 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CBI29_03245 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CBI29_03246 PF01011 PQQ enzyme repeat CBI29_03246 PF13360 PQQ-like domain CBI29_03247 PF04966 Carbohydrate-selective porin, OprB family CBI29_03248 PF02515 CoA-transferase family III CBI29_03249 PF12625 CBI29_03249 CBI29_03249 PF12833 Helix-turn-helix domain CBI29_03250 PF00108 Thiolase, N-terminal domain CBI29_03250 PF02803 Thiolase, C-terminal domain CBI29_03251 PF00378 Enoyl-CoA hydratase/isomerase family CBI29_03251 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CBI29_03251 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CBI29_03253 PF01734 Patatin-like phospholipase CBI29_03254 PF13673 Acetyltransferase (GNAT) domain CBI29_03256 PF13679 CBI29_03256 CBI29_03257 PF03006 CBI29_03257 CBI29_03258 PF00083 Sugar (and other) transporter CBI29_03260 PF01043 SecA preprotein cross-linking domain CBI29_03260 PF02810 SEC-C motif CBI29_03260 PF07516 SecA Wing and Scaffold domain CBI29_03260 PF07517 SecA DEAD-like domain CBI29_03261 PF00578 AhpC/TSA family CBI29_03261 PF10417 C-terminal domain of 1-Cys peroxiredoxin CBI29_03262 PF00753 Metallo-beta-lactamase superfamily CBI29_03263 PF00782 Dual specificity phosphatase, catalytic domain CBI29_03264 PF05036 Sporulation related domain CBI29_03265 PF02875 Mur ligase family, glutamate ligase domain CBI29_03265 PF08245 Mur ligase middle domain CBI29_03266 PF01039 Carboxyl transferase domain CBI29_03267 PF00290 Tryptophan synthase alpha chain CBI29_03268 PF12625 CBI29_03268 CBI29_03268 PF12833 Helix-turn-helix domain CBI29_03269 PF10118 CBI29_03269 CBI29_03270 PF10974 CBI29_03270 CBI29_03271 PF07566 Domain of Unknown Function (DUF1543) CBI29_03272 PF00291 Pyridoxal-phosphate dependent enzyme CBI29_03273 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CBI29_03274 PF00593 TonB dependent receptor CBI29_03274 PF07715 TonB-dependent Receptor Plug Domain CBI29_03275 PF01923 Cobalamin adenosyltransferase CBI29_03276 PF03009 Glycerophosphoryl diester phosphodiesterase family CBI29_03277 PF03724 META domain CBI29_03278 PF00487 CBI29_03278 CBI29_03279 PF02696 CBI29_03279 CBI29_03280 PF00072 Response regulator receiver domain CBI29_03280 PF00486 Transcriptional regulatory protein, C terminal CBI29_03281 PF00512 His Kinase A (phospho-acceptor) domain CBI29_03281 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_03283 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_03283 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_03283 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_03283 PF12418 CBI29_03283 CBI29_03283 PF12806 CBI29_03283 CBI29_03284 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_03284 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_03284 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_03284 PF12418 CBI29_03284 CBI29_03284 PF12806 CBI29_03284 CBI29_03285 PF06146 CBI29_03285 CBI29_03286 PF11776 Domain of unknown function (DUF3315) CBI29_03288 PF13091 PLD-like domain CBI29_03289 PF00593 TonB dependent receptor CBI29_03289 PF07715 TonB-dependent Receptor Plug Domain CBI29_03290 PF13803 CBI29_03290 CBI29_03291 PF00152 tRNA synthetases class II (D, K and N) CBI29_03291 PF01336 OB-fold nucleic acid binding domain CBI29_03291 PF02938 GAD domain CBI29_03293 PF00534 Glycosyl transferases group 1 CBI29_03294 PF04488 Glycosyltransferase sugar-binding region containing DXD motif CBI29_03295 PF01755 CBI29_03295 CBI29_03297 PF00534 Glycosyl transferases group 1 CBI29_03297 PF13439 Glycosyltransferase Family 4 CBI29_03298 PF00535 Glycosyl transferase family 2 CBI29_03299 PF01522 Polysaccharide deacetylase CBI29_03300 PF13524 Glycosyl transferases group 1 CBI29_03301 PF06258 CBI29_03301 CBI29_03302 PF01063 Aminotransferase class IV CBI29_03303 PF03710 Glutamate-ammonia ligase adenylyltransferase CBI29_03303 PF08335 GlnD PII-uridylyltransferase CBI29_03304 PF00512 His Kinase A (phospho-acceptor) domain CBI29_03304 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_03305 PF04860 Phage portal protein CBI29_03306 PF03237 Terminase-like family CBI29_03306 PF06056 Putative ATPase subunit of terminase (gpP-like) CBI29_03306 PF17289 CBI29_03306 CBI29_03307 PF05929 CBI29_03307 CBI29_03308 PF05125 CBI29_03308 CBI29_03309 PF05944 CBI29_03309 CBI29_03310 PF05926 CBI29_03310 CBI29_03311 PF05489 Phage Tail Protein X CBI29_03312 PF16931 CBI29_03312 CBI29_03313 PF05449 CBI29_03313 CBI29_03314 PF01471 Putative peptidoglycan binding domain CBI29_03314 PF11860 CBI29_03314 CBI29_03315 PF06891 CBI29_03315 CBI29_03316 PF05069 CBI29_03316 CBI29_03317 PF04717 Phage-related baseplate assembly protein CBI29_03318 PF04965 Gene 25-like lysozyme CBI29_03319 PF04865 CBI29_03319 CBI29_03320 PF09684 CBI29_03320 CBI29_03321 PF12571 CBI29_03321 CBI29_03322 PF04984 Phage tail sheath protein CBI29_03322 PF17482 CBI29_03322 CBI29_03323 PF04985 CBI29_03323 CBI29_03324 PF10109 CBI29_03324 CBI29_03325 PF10145 CBI29_03325 CBI29_03326 PF06995 CBI29_03326 CBI29_03327 PF05954 Phage late control gene D protein (GPD) CBI29_03328 PF04606 CBI29_03328 CBI29_03329 PF01258 Prokaryotic dksA/traR C4-type zinc finger CBI29_03331 PF00533 BRCA1 C Terminus (BRCT) domain CBI29_03333 PF09669 CBI29_03333 CBI29_03337 PF13155 Toprim-like CBI29_03340 PF05180 DNL zinc finger CBI29_03342 PF00436 Single-strand binding protein family CBI29_03343 PF00929 Exonuclease CBI29_03346 PF00589 Phage integrase family CBI29_03348 PF02547 Queuosine biosynthesis protein CBI29_03350 PF04011 LemA family CBI29_03351 PF01702 Queuine tRNA-ribosyltransferase CBI29_03352 PF02699 Preprotein translocase subunit CBI29_03353 PF02355 Protein export membrane protein CBI29_03353 PF07549 SecD/SecF GG Motif CBI29_03353 PF13721 SecD export protein N-terminal TM region CBI29_03354 PF02355 Protein export membrane protein CBI29_03354 PF07549 SecD/SecF GG Motif CBI29_03355 PF02441 Flavoprotein CBI29_03355 PF04127 DNA / pantothenate metabolism flavoprotein CBI29_03356 PF04002 RadC-like JAB domain CBI29_03357 PF01062 CBI29_03357 CBI29_03358 PF02811 PHP domain CBI29_03359 PF04279 CBI29_03359 CBI29_03360 PF03795 YCII-related domain CBI29_03362 PF01266 FAD dependent oxidoreductase CBI29_03362 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CBI29_03363 PF00581 Rhodanese-like domain CBI29_03364 PF04461 Protein of unknown function (DUF520) CBI29_03365 PF14539 Domain of unknown function (DUF4442) CBI29_03366 PF03061 Thioesterase superfamily CBI29_03367 PF00085 Thioredoxin CBI29_03368 PF12146 Putative lysophospholipase CBI29_03369 PF04273 Putative phosphatase (DUF442) CBI29_03371 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CBI29_03371 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_03374 PF13689 CBI29_03374 CBI29_03375 PF00990 GGDEF domain CBI29_03375 PF17152 CBI29_03375 CBI29_03376 PF00691 OmpA family CBI29_03377 PF00149 Calcineurin-like phosphoesterase CBI29_03378 PF13091 PLD-like domain CBI29_03379 PF01553 Acyltransferase CBI29_03380 PF01926 50S ribosome-binding GTPase CBI29_03380 PF13167 CBI29_03380 CBI29_03380 PF16360 CBI29_03380 CBI29_03382 PF04172 CBI29_03382 CBI29_03383 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) CBI29_03384 PF00149 Calcineurin-like phosphoesterase CBI29_03385 PF00398 Ribosomal RNA adenine dimethylase CBI29_03386 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CBI29_03387 PF00572 Ribosomal protein L13 CBI29_03388 PF00380 Ribosomal protein S9/S16 CBI29_03389 PF02798 Glutathione S-transferase, N-terminal domain CBI29_03390 PF04386 Stringent starvation protein B CBI29_03392 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CBI29_03392 PF00364 Biotin-requiring enzyme CBI29_03392 PF02785 Biotin carboxylase C-terminal domain CBI29_03392 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CBI29_03393 PF00378 Enoyl-CoA hydratase/isomerase family CBI29_03394 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_03394 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_03394 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_03395 PF01039 Carboxyl transferase domain CBI29_03396 PF13561 Enoyl-(Acyl carrier protein) reductase CBI29_03397 PF07287 CBI29_03397 CBI29_03398 PF00440 Bacterial regulatory proteins, tetR family CBI29_03399 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_03399 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_03399 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_03400 PF14066 CBI29_03400 CBI29_03401 PF04828 Glutathione-dependent formaldehyde-activating enzyme CBI29_03405 PF01066 CDP-alcohol phosphatidyltransferase CBI29_03406 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ CBI29_03407 PF13640 2OG-Fe(II) oxygenase superfamily CBI29_03409 PF10982 Protein of unknown function (DUF2789) CBI29_03410 PF00056 lactate/malate dehydrogenase, NAD binding domain CBI29_03410 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CBI29_03411 PF00445 Ribonuclease T2 family CBI29_03412 PF01464 Transglycosylase SLT domain CBI29_03413 PF00919 Uncharacterized protein family UPF0004 CBI29_03413 PF01938 TRAM domain CBI29_03413 PF04055 Radical SAM superfamily CBI29_03414 PF02562 PhoH-like protein CBI29_03415 PF02130 Uncharacterized protein family UPF0054 CBI29_03416 PF03544 Gram-negative bacterial TonB protein C-terminal CBI29_03418 PF11306 Protein of unknown function (DUF3108) CBI29_03420 PF03358 NADPH-dependent FMN reductase CBI29_03421 PF03631 CBI29_03421 CBI29_03422 PF00892 EamA-like transporter family CBI29_03423 PF02311 AraC-like ligand binding domain CBI29_03423 PF12833 Helix-turn-helix domain CBI29_03424 PF01557 Fumarylacetoacetate (FAA) hydrolase family CBI29_03426 PF00881 Nitroreductase family CBI29_03429 PF12710 haloacid dehalogenase-like hydrolase CBI29_03433 PF00575 S1 RNA binding domain CBI29_03433 PF00773 RNB domain CBI29_03433 PF08206 Ribonuclease B OB domain CBI29_03434 PF01432 Peptidase family M3 CBI29_03435 PF09526 CBI29_03435 CBI29_03437 PF06808 CBI29_03437 CBI29_03438 PF01694 Rhomboid family CBI29_03442 PF03937 Flavinator of succinate dehydrogenase CBI29_03443 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_03443 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_03443 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_03444 PF00743 Flavin-binding monooxygenase-like CBI29_03444 PF13450 NAD(P)-binding Rossmann-like domain CBI29_03445 PF01196 Ribosomal protein L17 CBI29_03446 PF01000 RNA polymerase Rpb3/RpoA insert domain CBI29_03446 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CBI29_03446 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CBI29_03447 PF00163 Ribosomal protein S4/S9 N-terminal domain CBI29_03447 PF01479 S4 domain CBI29_03448 PF00411 Ribosomal protein S11 CBI29_03449 PF00416 Ribosomal protein S13/S18 CBI29_03450 PF00444 Ribosomal protein L36 CBI29_03451 PF00344 SecY translocase CBI29_03452 PF00828 Ribosomal protein L18e/L15 CBI29_03453 PF00327 Ribosomal protein L30p/L7e CBI29_03454 PF00333 Ribosomal protein S5, N-terminal domain CBI29_03454 PF03719 Ribosomal protein S5, C-terminal domain CBI29_03455 PF00861 Ribosomal L18p/L5e family CBI29_03456 PF00347 Ribosomal protein L6 CBI29_03457 PF00410 Ribosomal protein S8 CBI29_03458 PF00253 Ribosomal protein S14p/S29e CBI29_03459 PF00281 Ribosomal protein L5 CBI29_03459 PF00673 ribosomal L5P family C-terminus CBI29_03460 PF00467 KOW motif CBI29_03460 PF17136 CBI29_03460 CBI29_03461 PF00238 Ribosomal protein L14p/L23e CBI29_03462 PF00366 Ribosomal protein S17 CBI29_03463 PF00831 Ribosomal L29 protein CBI29_03464 PF00252 Ribosomal protein L16p/L10e CBI29_03465 PF00189 Ribosomal protein S3, C-terminal domain CBI29_03465 PF07650 KH domain CBI29_03466 PF00237 Ribosomal protein L22p/L17e CBI29_03467 PF00203 Ribosomal protein S19 CBI29_03468 PF00181 Ribosomal Proteins L2, RNA binding domain CBI29_03468 PF03947 Ribosomal Proteins L2, C-terminal domain CBI29_03469 PF00276 Ribosomal protein L23 CBI29_03470 PF00573 Ribosomal protein L4/L1 family CBI29_03471 PF00297 Ribosomal protein L3 CBI29_03472 PF00338 Ribosomal protein S10p/S20e CBI29_03473 PF00117 Glutamine amidotransferase class-I CBI29_03474 PF01053 Cys/Met metabolism PLP-dependent enzyme CBI29_03475 PF05872 CBI29_03475 CBI29_03476 PF00042 Globin CBI29_03477 PF02082 Transcriptional regulator CBI29_03478 PF01926 50S ribosome-binding GTPase CBI29_03479 PF10118 CBI29_03479 CBI29_03480 PF00375 Sodium:dicarboxylate symporter family CBI29_03481 PF13622 Thioesterase-like superfamily CBI29_03482 PF01553 Acyltransferase CBI29_03483 PF03480 Bacterial extracellular solute-binding protein, family 7 CBI29_03484 PF13460 NADH(P)-binding CBI29_03485 PF00270 DEAD/DEAH box helicase CBI29_03485 PF00271 Helicase conserved C-terminal domain CBI29_03485 PF17191 CBI29_03485 CBI29_03486 PF00156 Phosphoribosyl transferase domain CBI29_03487 PF00293 NUDIX domain CBI29_03488 PF03641 Possible lysine decarboxylase CBI29_03489 PF01544 CorA-like Mg2+ transporter protein CBI29_03490 PF13466 STAS domain CBI29_03491 PF05494 Toluene tolerance, Ttg2 CBI29_03492 PF02470 CBI29_03492 CBI29_03493 PF02405 CBI29_03493 CBI29_03494 PF00005 ABC transporter CBI29_03496 PF00270 DEAD/DEAH box helicase CBI29_03496 PF00271 Helicase conserved C-terminal domain CBI29_03497 PF00459 Inositol monophosphatase family CBI29_03498 PF02779 Transketolase, pyrimidine binding domain CBI29_03498 PF02780 Transketolase, C-terminal domain CBI29_03498 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CBI29_03499 PF00925 GTP cyclohydrolase II CBI29_03500 PF01218 Coproporphyrinogen III oxidase CBI29_03501 PF01488 Shikimate / quinate 5-dehydrogenase CBI29_03501 PF08501 Shikimate dehydrogenase substrate binding domain CBI29_03503 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CBI29_03503 PF02770 Acyl-CoA dehydrogenase, middle domain CBI29_03503 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CBI29_03503 PF12418 CBI29_03503 CBI29_03503 PF12806 CBI29_03503 CBI29_03505 PF04024 CBI29_03505 CBI29_03506 PF00571 CBS domain CBI29_03506 PF04982 CBI29_03506 CBI29_03507 PF13566 CBI29_03507 CBI29_03509 PF07690 Major Facilitator Superfamily CBI29_03510 PF02091 Glycyl-tRNA synthetase alpha subunit CBI29_03511 PF02092 CBI29_03511 CBI29_03511 PF05746 DALR anticodon binding domain CBI29_03513 PF03235 CBI29_03513 CBI29_03514 PF03795 YCII-related domain CBI29_03515 PF00892 EamA-like transporter family CBI29_03516 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_03516 PF03466 LysR substrate binding domain CBI29_03519 PF00082 Subtilase family CBI29_03522 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CBI29_03523 PF04996 Succinylarginine dihydrolase CBI29_03524 PF00171 Aldehyde dehydrogenase family CBI29_03525 PF04958 Arginine N-succinyltransferase beta subunit CBI29_03526 PF00202 Aminotransferase class-III CBI29_03527 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CBI29_03527 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CBI29_03528 PF00324 Amino acid permease CBI29_03530 PF08241 Methyltransferase domain CBI29_03533 PF10107 CBI29_03533 CBI29_03534 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CBI29_03535 PF01594 CBI29_03535 CBI29_03536 PF00080 Copper/zinc superoxide dismutase (SODC) CBI29_03537 PF12805 CBI29_03537 CBI29_03537 PF13515 CBI29_03537 CBI29_03538 PF07690 Major Facilitator Superfamily CBI29_03540 PF02525 Flavodoxin-like fold CBI29_03541 PF03992 Antibiotic biosynthesis monooxygenase CBI29_03543 PF01565 FAD binding domain CBI29_03543 PF02913 FAD linked oxidases, C-terminal domain CBI29_03544 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CBI29_03544 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CBI29_03545 PF00892 EamA-like transporter family CBI29_03546 PF00892 EamA-like transporter family CBI29_03547 PF01814 Hemerythrin HHE cation binding domain CBI29_03548 PF01925 CBI29_03548 CBI29_03549 PF01509 TruB family pseudouridylate synthase (N terminal domain) CBI29_03549 PF09157 Pseudouridine synthase II TruB, C-terminal CBI29_03549 PF16198 CBI29_03549 CBI29_03550 PF03280 Proteobacterial lipase chaperone protein CBI29_03551 PF00561 alpha/beta hydrolase fold CBI29_03552 PF01245 Ribosomal protein L19 CBI29_03553 PF01746 tRNA (Guanine-1)-methyltransferase CBI29_03554 PF01782 RimM N-terminal domain CBI29_03554 PF05239 PRC-barrel domain CBI29_03555 PF00886 Ribosomal protein S16 CBI29_03556 PF07963 Prokaryotic N-terminal methylation motif CBI29_03556 PF16732 CBI29_03556 CBI29_03557 PF07963 Prokaryotic N-terminal methylation motif CBI29_03557 PF16732 CBI29_03557 CBI29_03558 PF05567 Neisseria PilC beta-propeller domain CBI29_03558 PF13519 von Willebrand factor type A domain CBI29_03560 PF07963 Prokaryotic N-terminal methylation motif CBI29_03560 PF16074 CBI29_03560 CBI29_03561 PF07963 Prokaryotic N-terminal methylation motif CBI29_03562 PF07963 Prokaryotic N-terminal methylation motif CBI29_03562 PF12019 Type II transport protein GspH CBI29_03563 PF02401 LytB protein CBI29_03564 PF00625 Guanylate kinase CBI29_03565 PF01192 RNA polymerase Rpb6 CBI29_03566 PF02824 TGS domain CBI29_03566 PF13328 HD domain CBI29_03567 PF01042 Endoribonuclease L-PSP CBI29_03568 PF04324 BFD-like [2Fe-2S] binding domain CBI29_03569 PF00210 Ferritin-like domain CBI29_03570 PF04932 CBI29_03570 CBI29_03570 PF11846 CBI29_03570 CBI29_03570 PF15864 CBI29_03570 CBI29_03571 PF00114 Pilin (bacterial filament) CBI29_03571 PF07963 Prokaryotic N-terminal methylation motif CBI29_03572 PF04536 TLP18 CBI29_03573 PF04536 TLP18 CBI29_03574 PF04011 LemA family CBI29_03575 PF10118 CBI29_03575 CBI29_03576 PF07992 Pyridine nucleotide-disulphide oxidoreductase CBI29_03576 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CBI29_03577 PF00310 Glutamine amidotransferases class-II CBI29_03577 PF01493 GXGXG motif CBI29_03577 PF01645 Conserved region in glutamate synthase CBI29_03577 PF04898 Glutamate synthase central domain CBI29_03579 PF01761 3-dehydroquinate synthase CBI29_03580 PF01202 Shikimate kinase CBI29_03581 PF00263 CBI29_03581 CBI29_03581 PF03958 Bacterial type II/III secretion system short domain CBI29_03581 PF07660 Secretin and TonB N terminus short domain CBI29_03581 PF11741 AMIN domain CBI29_03582 PF04351 Pilus assembly protein, PilP CBI29_03583 PF04350 Pilus assembly protein, PilO CBI29_03584 PF05137 CBI29_03584 CBI29_03585 PF11104 Type IV pilus assembly protein PilM; CBI29_03586 PF00905 Penicillin binding protein transpeptidase domain CBI29_03586 PF00912 Transglycosylase CBI29_03586 PF17092 CBI29_03586 CBI29_03587 PF08241 Methyltransferase domain CBI29_03589 PF00953 Glycosyl transferase family 4 CBI29_03590 PF01225 Mur ligase family, catalytic domain CBI29_03590 PF02875 Mur ligase family, glutamate ligase domain CBI29_03590 PF08245 Mur ligase middle domain CBI29_03591 PF02875 Mur ligase family, glutamate ligase domain CBI29_03591 PF08245 Mur ligase middle domain CBI29_03592 PF00905 Penicillin binding protein transpeptidase domain CBI29_03592 PF03717 Penicillin-binding Protein dimerisation domain CBI29_03593 PF04999 CBI29_03593 CBI29_03594 PF01795 MraW methylase family CBI29_03595 PF13531 Bacterial extracellular solute-binding protein CBI29_03597 PF00749 tRNA synthetases class I (E and Q), catalytic domain CBI29_03600 PF00324 Amino acid permease CBI29_03606 PF01545 Cation efflux family CBI29_03607 PF00873 AcrB/AcrD/AcrF family CBI29_03608 PF16576 CBI29_03608 CBI29_03609 PF02321 Outer membrane efflux protein CBI29_03613 PF00005 ABC transporter CBI29_03613 PF12848 ABC transporter CBI29_03614 PF01053 Cys/Met metabolism PLP-dependent enzyme CBI29_03615 PF00106 short chain dehydrogenase CBI29_03616 PF00484 Carbonic anhydrase CBI29_03616 PF00916 CBI29_03616 CBI29_03617 PF00575 S1 RNA binding domain CBI29_03617 PF09371 Tex-like protein N-terminal domain CBI29_03617 PF12836 Helix-hairpin-helix motif CBI29_03617 PF16921 CBI29_03617 CBI29_03618 PF00072 Response regulator receiver domain CBI29_03618 PF00486 Transcriptional regulatory protein, C terminal CBI29_03619 PF00512 His Kinase A (phospho-acceptor) domain CBI29_03619 PF00672 HAMP domain CBI29_03619 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_03620 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CBI29_03620 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CBI29_03621 PF00583 Acetyltransferase (GNAT) family CBI29_03624 PF12568 Acetyltransferase (GNAT) domain CBI29_03625 PF00475 Imidazoleglycerol-phosphate dehydratase CBI29_03626 PF00117 Glutamine amidotransferase class-I CBI29_03627 PF05656 CBI29_03627 CBI29_03628 PF01612 3'-5' exonuclease CBI29_03629 PF00977 Histidine biosynthesis protein CBI29_03630 PF01381 Helix-turn-helix CBI29_03630 PF07883 Cupin domain CBI29_03631 PF00892 EamA-like transporter family CBI29_03633 PF00313 'Cold-shock' DNA-binding domain CBI29_03633 PF06961 CBI29_03633 CBI29_03634 PF01636 Phosphotransferase enzyme family CBI29_03635 PF00977 Histidine biosynthesis protein CBI29_03637 PF12625 CBI29_03637 CBI29_03637 PF12833 Helix-turn-helix domain CBI29_03638 PF00230 Major intrinsic protein CBI29_03640 PF01810 CBI29_03640 CBI29_03641 PF01223 DNA/RNA non-specific endonuclease CBI29_03643 PF02705 CBI29_03643 CBI29_03645 PF13302 Acetyltransferase (GNAT) domain CBI29_03646 PF12833 Helix-turn-helix domain CBI29_03647 PF02525 Flavodoxin-like fold CBI29_03648 PF01638 HxlR-like helix-turn-helix CBI29_03651 PF01638 HxlR-like helix-turn-helix CBI29_03652 PF02627 Carboxymuconolactone decarboxylase family CBI29_03653 PF00440 Bacterial regulatory proteins, tetR family CBI29_03654 PF12833 Helix-turn-helix domain CBI29_03655 PF00248 Aldo/keto reductase family CBI29_03658 PF00892 EamA-like transporter family CBI29_03659 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_03659 PF03466 LysR substrate binding domain CBI29_03660 PF07690 Major Facilitator Superfamily CBI29_03663 PF04828 Glutathione-dependent formaldehyde-activating enzyme CBI29_03664 PF13489 Methyltransferase domain CBI29_03665 PF01593 Flavin containing amine oxidoreductase CBI29_03666 PF02678 Pirin CBI29_03666 PF05726 Pirin C-terminal cupin domain CBI29_03667 PF00857 Isochorismatase family CBI29_03668 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_03668 PF03466 LysR substrate binding domain CBI29_03669 PF00171 Aldehyde dehydrogenase family CBI29_03670 PF00202 Aminotransferase class-III CBI29_03671 PF00155 Aminotransferase class I and II CBI29_03671 PF00392 Bacterial regulatory proteins, gntR family CBI29_03672 PF00324 Amino acid permease CBI29_03673 PF01381 Helix-turn-helix CBI29_03673 PF07883 Cupin domain CBI29_03674 PF03591 CBI29_03674 CBI29_03675 PF05437 CBI29_03675 CBI29_03676 PF00436 Single-strand binding protein family CBI29_03677 PF07690 Major Facilitator Superfamily CBI29_03678 PF04332 CBI29_03678 CBI29_03679 PF03070 TENA/THI-4/PQQC family CBI29_03680 PF06942 CBI29_03680 CBI29_03681 PF06993 CBI29_03681 CBI29_03682 PF00107 Zinc-binding dehydrogenase CBI29_03682 PF08240 Alcohol dehydrogenase GroES-like domain CBI29_03683 PF00440 Bacterial regulatory proteins, tetR family CBI29_03683 PF16925 CBI29_03683 CBI29_03684 PF00005 ABC transporter CBI29_03685 PF00990 GGDEF domain CBI29_03686 PF16956 CBI29_03686 CBI29_03687 PF02028 BCCT family transporter CBI29_03688 PF07885 Ion channel CBI29_03689 PF00474 Sodium:solute symporter family CBI29_03690 PF04341 CBI29_03690 CBI29_03691 PF00072 Response regulator receiver domain CBI29_03691 PF00512 His Kinase A (phospho-acceptor) domain CBI29_03691 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_03691 PF12860 CBI29_03691 CBI29_03693 PF00072 Response regulator receiver domain CBI29_03693 PF00196 Bacterial regulatory proteins, luxR family CBI29_03694 PF03358 NADPH-dependent FMN reductase CBI29_03695 PF00296 Luciferase-like monooxygenase CBI29_03696 PF13412 Winged helix-turn-helix DNA-binding CBI29_03697 PF00857 Isochorismatase family CBI29_03698 PF00501 AMP-binding enzyme CBI29_03698 PF13193 AMP-binding enzyme C-terminal domain CBI29_03698 PF16177 CBI29_03698 CBI29_03699 PF05656 CBI29_03699 CBI29_03700 PF00924 Mechanosensitive ion channel CBI29_03701 PF04452 RNA methyltransferase CBI29_03702 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CBI29_03703 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CBI29_03704 PF12840 Helix-turn-helix domain CBI29_03706 PF00472 RF-1 domain CBI29_03706 PF03462 PCRF domain CBI29_03707 PF16956 CBI29_03707 CBI29_03708 PF01368 DHH family CBI29_03708 PF02272 DHHA1 domain CBI29_03709 PF01243 Pyridoxamine 5'-phosphate oxidase CBI29_03709 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CBI29_03710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CBI29_03710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CBI29_03710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CBI29_03710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CBI29_03711 PF00478 IMP dehydrogenase / GMP reductase domain CBI29_03711 PF00571 CBS domain CBI29_03712 PF03692 CBI29_03712 CBI29_03713 PF00753 Metallo-beta-lactamase superfamily CBI29_03714 PF00593 TonB dependent receptor CBI29_03714 PF07715 TonB-dependent Receptor Plug Domain CBI29_03715 PF01169 CBI29_03715 CBI29_03717 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CBI29_03717 PF00364 Biotin-requiring enzyme CBI29_03717 PF02817 e3 binding domain CBI29_03718 PF00456 Transketolase, thiamine diphosphate binding domain CBI29_03719 PF01551 Peptidase family M23 CBI29_03720 PF05258 CBI29_03720 CBI29_03721 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CBI29_03722 PF00091 Tubulin/FtsZ family, GTPase domain CBI29_03722 PF12327 FtsZ family, C-terminal domain CBI29_03723 PF02491 SHS2 domain inserted in FTSA CBI29_03723 PF14450 Cell division protein FtsA CBI29_03724 PF03799 Cell division protein FtsQ CBI29_03724 PF08478 POTRA domain, FtsQ-type CBI29_03725 PF01820 D-ala D-ala ligase N-terminus CBI29_03725 PF07478 D-ala D-ala ligase C-terminus CBI29_03726 PF01225 Mur ligase family, catalytic domain CBI29_03726 PF02875 Mur ligase family, glutamate ligase domain CBI29_03726 PF08245 Mur ligase middle domain CBI29_03727 PF03033 Glycosyltransferase family 28 N-terminal domain CBI29_03727 PF04101 Glycosyltransferase family 28 C-terminal domain CBI29_03728 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CBI29_03728 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CBI29_03729 PF08410 CBI29_03729 CBI29_03730 PF00593 TonB dependent receptor CBI29_03730 PF07715 TonB-dependent Receptor Plug Domain CBI29_03731 PF00156 Phosphoribosyl transferase domain CBI29_03732 PF03372 Endonuclease/Exonuclease/phosphatase family CBI29_03733 PF03960 ArsC family CBI29_03734 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) CBI29_03735 PF07859 alpha/beta hydrolase fold CBI29_03736 PF00990 GGDEF domain CBI29_03737 PF00085 Thioredoxin CBI29_03737 PF02683 CBI29_03737 CBI29_03737 PF11412 Disulphide bond corrector protein DsbC CBI29_03738 PF13557 CBI29_03738 CBI29_03740 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CBI29_03741 PF01522 Polysaccharide deacetylase CBI29_03742 PF09349 OHCU decarboxylase CBI29_03743 PF00576 HIUase/Transthyretin family CBI29_03744 PF00860 Permease family CBI29_03745 PF03502 Nucleoside-specific channel-forming protein, Tsx CBI29_03746 PF01494 FAD binding domain CBI29_03747 PF03561 Allantoicase repeat CBI29_03748 PF04115 Ureidoglycolate hydrolase CBI29_03749 PF00204 DNA gyrase B CBI29_03749 PF00986 DNA gyrase B subunit, carboxyl terminus CBI29_03749 PF01751 Toprim domain CBI29_03749 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_03750 PF05728 Uncharacterised protein family (UPF0227) CBI29_03751 PF07819 PGAP1-like protein CBI29_03753 PF07007 Protein of unknown function (DUF1311) CBI29_03756 PF01476 LysM domain CBI29_03757 PF05954 Phage late control gene D protein (GPD) CBI29_03757 PF10106 CBI29_03757 CBI29_03757 PF13296 CBI29_03757 CBI29_03758 PF02600 Disulfide bond formation protein DsbB CBI29_03759 PF04262 Glutamate-cysteine ligase CBI29_03760 PF06041 Bacterial protein of unknown function (DUF924) CBI29_03762 PF04286 CBI29_03762 CBI29_03763 PF00155 Aminotransferase class I and II CBI29_03764 PF01554 MatE CBI29_03765 PF00106 short chain dehydrogenase CBI29_03767 PF00072 Response regulator receiver domain CBI29_03767 PF00486 Transcriptional regulatory protein, C terminal CBI29_03768 PF00512 His Kinase A (phospho-acceptor) domain CBI29_03768 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_03768 PF11808 CBI29_03768 CBI29_03768 PF13188 PAS domain CBI29_03769 PF12146 Putative lysophospholipase CBI29_03770 PF02666 CBI29_03770 CBI29_03771 PF00581 Rhodanese-like domain CBI29_03772 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CBI29_03773 PF02580 D-Tyr-tRNA(Tyr) deacylase CBI29_03776 PF12710 haloacid dehalogenase-like hydrolase CBI29_03776 PF13740 ACT domain CBI29_03778 PF00925 GTP cyclohydrolase II CBI29_03778 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CBI29_03779 PF00885 6,7-dimethyl-8-ribityllumazine synthase CBI29_03780 PF01029 NusB family CBI29_03781 PF00586 AIR synthase related protein, N-terminal domain CBI29_03781 PF02769 AIR synthase related protein, C-terminal domain CBI29_03782 PF04608 Phosphatidylglycerophosphatase A CBI29_03783 PF00132 Bacterial transferase hexapeptide (six repeats) CBI29_03783 PF12804 MobA-like NTP transferase domain CBI29_03783 PF14602 Hexapeptide repeat of succinyl-transferase CBI29_03784 PF01380 SIS domain CBI29_03784 PF13522 Glutamine amidotransferase domain CBI29_03786 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_03786 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CBI29_03787 PF00145 C-5 cytosine-specific DNA methylase CBI29_03789 PF01177 Asp/Glu/Hydantoin racemase CBI29_03790 PF13419 Haloacid dehalogenase-like hydrolase CBI29_03791 PF05960 Bacterial protein of unknown function (DUF885) CBI29_03792 PF00491 Arginase family CBI29_03793 PF01979 Amidohydrolase family CBI29_03794 PF00324 Amino acid permease CBI29_03795 PF00221 Aromatic amino acid lyase CBI29_03796 PF01175 Urocanase CBI29_03796 PF17391 CBI29_03796 CBI29_03796 PF17392 CBI29_03796 CBI29_03797 PF05962 HutD CBI29_03798 PF00392 Bacterial regulatory proteins, gntR family CBI29_03798 PF07702 UTRA domain CBI29_03799 PF01757 CBI29_03799 CBI29_03800 PF02492 CobW/HypB/UreG, nucleotide-binding domain CBI29_03800 PF07683 Cobalamin synthesis protein cobW C-terminal domain CBI29_03801 PF08291 Peptidase M15 CBI29_03802 PF00324 Amino acid permease CBI29_03803 PF01557 Fumarylacetoacetate (FAA) hydrolase family CBI29_03803 PF09298 Fumarylacetoacetase N-terminal CBI29_03804 PF02798 Glutathione S-transferase, N-terminal domain CBI29_03804 PF14497 Glutathione S-transferase, C-terminal domain CBI29_03805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CBI29_03806 PF01614 Bacterial transcriptional regulator CBI29_03806 PF09339 IclR helix-turn-helix domain CBI29_03807 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CBI29_03807 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal CBI29_03808 PF04463 CBI29_03808 CBI29_03809 PF01554 MatE CBI29_03810 PF01758 Sodium Bile acid symporter family CBI29_03811 PF00857 Isochorismatase family CBI29_03812 PF00701 Dihydrodipicolinate synthetase family CBI29_03814 PF01259 SAICAR synthetase CBI29_03816 PF01226 Formate/nitrite transporter CBI29_03817 PF00004 ATPase family associated with various cellular activities (AAA) CBI29_03817 PF12002 MgsA AAA+ ATPase C terminal CBI29_03817 PF16193 CBI29_03817 CBI29_03818 PF07995 Glucose / Sorbosone dehydrogenase CBI29_03819 PF03692 CBI29_03819 CBI29_03820 PF07043 CBI29_03820 CBI29_03821 PF01738 Dienelactone hydrolase family CBI29_03822 PF01230 HIT domain CBI29_03823 PF00633 Helix-hairpin-helix motif CBI29_03823 PF00730 HhH-GPD superfamily base excision DNA repair protein CBI29_03823 PF14815 NUDIX domain CBI29_03824 PF01551 Peptidase family M23 CBI29_03826 PF03352 Methyladenine glycosylase CBI29_03827 PF00107 Zinc-binding dehydrogenase CBI29_03827 PF08240 Alcohol dehydrogenase GroES-like domain CBI29_03828 PF00155 Aminotransferase class I and II CBI29_03828 PF00392 Bacterial regulatory proteins, gntR family CBI29_03830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_03830 PF03466 LysR substrate binding domain CBI29_03831 PF00248 Aldo/keto reductase family CBI29_03832 PF07690 Major Facilitator Superfamily CBI29_03833 PF01852 START domain CBI29_03834 PF01113 Dihydrodipicolinate reductase, N-terminus CBI29_03834 PF05173 Dihydrodipicolinate reductase, C-terminus CBI29_03836 PF00226 DnaJ domain CBI29_03836 PF00684 DnaJ central domain CBI29_03836 PF01556 DnaJ C terminal domain CBI29_03838 PF00873 AcrB/AcrD/AcrF family CBI29_03839 PF16576 CBI29_03839 CBI29_03840 PF00440 Bacterial regulatory proteins, tetR family CBI29_03840 PF14246 AefR-like transcriptional repressor, C-terminal region CBI29_03841 PF00311 Phosphoenolpyruvate carboxylase CBI29_03842 PF00860 Permease family CBI29_03843 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CBI29_03843 PF03466 LysR substrate binding domain CBI29_03844 PF01925 CBI29_03844 CBI29_03846 PF00920 Dehydratase family CBI29_03847 PF00551 Formyl transferase CBI29_03847 PF02911 Formyl transferase, C-terminal domain CBI29_03848 PF01029 NusB family CBI29_03848 PF01189 NOL1/NOP2/sun family CBI29_03849 PF16951 CBI29_03849 CBI29_03850 PF00209 Sodium:neurotransmitter symporter family CBI29_03852 PF00043 Glutathione S-transferase, C-terminal domain CBI29_03852 PF13417 Glutathione S-transferase, N-terminal domain CBI29_03856 PF05052 CBI29_03856 CBI29_03860 PF01610 CBI29_03860 CBI29_03860 PF13542 CBI29_03860 CBI29_03860 PF14690 CBI29_03860 CBI29_03861 PF00809 Pterin binding enzyme CBI29_04101 PF00303 Thymidylate synthase CBI29_04102 PF00186 Dihydrofolate reductase CBI29_04103 PF06412 CBI29_04103 CBI29_04105 PF03389 MobA/MobL family CBI29_04301 PF01051 Initiator Replication protein CBI29_04304 PF08238 Sel1 repeat CBI29_04305 PF04365 Protein of unknown function (DUF497) CBI29_04306 PF14384 CBI29_04306 CBI29_04307 PF00593 TonB dependent receptor CBI29_04307 PF07715 TonB-dependent Receptor Plug Domain CBI29_04401 PF03090 CBI29_04401 CBI29_04401 PF08708 Primase C terminal 1 (PriCT-1) CBI29_04403 PF06414 Zeta toxin CBI29_04404 PF06666 CBI29_04404 CBI29_04412 PF00565 Staphylococcal nuclease homologue CBI29_04414 PF00816 H-NS histone family CBI29_04419 PF10979 CBI29_04419 CBI29_04423 PF02384 N-6 DNA Methylase CBI29_04424 PF13614 AAA domain CBI29_04425 PF02195 ParB-like nuclease domain CBI29_04425 PF08535 KorB domain CBI29_04429 PF05816 CBI29_04429 CBI29_04442 PF13744 Helix-turn-helix domain CBI29_04443 PF05973 CBI29_04443 CBI29_04457 PF10412 Type IV secretion-system coupling protein DNA-binding domain CBI29_04458 PF08751 TrwC relaxase CBI29_04458 PF13604 AAA domain CBI29_04461 PF08721 TnsA endonuclease C terminal CBI29_04461 PF08722 TnsA endonuclease N terminal CBI29_04462 PF00665 Integrase core domain CBI29_04462 PF09299 Mu transposase, C-terminal CBI29_04463 PF05621 CBI29_04463 CBI29_04464 PF06527 CBI29_04464 CBI29_04468 PF00582 Universal stress protein family CBI29_04469 PF00916 CBI29_04469 CBI29_04469 PF01740 STAS domain CBI29_04470 PF01609 Transposase DDE domain CBI29_04471 PF01609 Transposase DDE domain CBI29_04474 PF00905 Penicillin binding protein transpeptidase domain CBI29_04475 PF01609 Transposase DDE domain CBI29_04476 PF01609 Transposase DDE domain CBI29_04478 PF07178 CBI29_04478 CBI29_04486 PF00239 Resolvase, N terminal domain CBI29_04489 PF01464 Transglycosylase SLT domain CBI29_04492 PF05309 CBI29_04492 CBI29_04493 PF06586 CBI29_04493 CBI29_04494 PF03743 Bacterial conjugation TrbI-like protein CBI29_04495 PF10411 Disulfide bond isomerase protein N-terminus CBI29_04495 PF13098 Thioredoxin-like domain CBI29_04497 PF09676 CBI29_04497 CBI29_04498 PF11130 CBI29_04498 CBI29_04498 PF12846 AAA-like domain CBI29_04500 PF10502 Signal peptidase, peptidase S26 CBI29_04502 PF06834 CBI29_04502 CBI29_04503 PF09673 CBI29_04503 CBI29_04504 PF06986 CBI29_04504 CBI29_04505 PF13728 F plasmid transfer operon protein CBI29_04507 PF06122 CBI29_04507 CBI29_04508 PF07916 CBI29_04508 CBI29_04509 PF01464 Transglycosylase SLT domain CBI29_04511 PF00817 impB/mucB/samB family CBI29_04511 PF11799 impB/mucB/samB family C-terminal domain CBI29_04511 PF13438 CBI29_04511