AB57_0014 SM00382 ATPases associated with a variety of cellular activities AB57_0019 SM00480 DNA polymerase III beta subunit AB57_0020 SM00382 ATPases associated with a variety of cellular activities AB57_0020 SM00760 Bacterial dnaA protein helix-turn-helix domain AB57_0023 SM01234 AB57_0023 AB57_0038 SM00014 Acid phosphatase homologues AB57_0042 SM01001 AIR carboxylase AB57_0046 SM00235 Zinc-dependent metalloprotease AB57_0047 SM00235 Zinc-dependent metalloprotease AB57_0051 SM00849 Metallo-beta-lactamase superfamily AB57_0057 SM00248 ankyrin repeats AB57_0062 SM00904 Riboflavin kinase AB57_0066 SM00382 ATPases associated with a variety of cellular activities AB57_0069 SM00062 Bacterial periplasmic substrate-binding proteins AB57_0070 SM00062 Bacterial periplasmic substrate-binding proteins AB57_0087 SM00644 AB57_0087 AB57_0117 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_0117 SM00895 AB57_0117 AB57_0121 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_0121 SM00895 AB57_0121 AB57_0137 SM00344 helix_turn_helix ASNC type AB57_0139 SM01005 Alanine racemase, C-terminal domain AB57_0153 SM00421 helix_turn_helix, Lux Regulon AB57_0156 SM00823 Phosphopantetheine attachment site AB57_0156 SM01294 AB57_0156 AB57_0157 SM00823 Phosphopantetheine attachment site AB57_0157 SM00824 Thioesterase AB57_0178 SM00836 DALR anticodon binding domain AB57_0178 SM01016 Arginyl tRNA synthetase N terminal dom AB57_0179 SM00919 Malic enzyme, NAD binding domain AB57_0179 SM01274 AB57_0179 AB57_0183 SM00382 ATPases associated with a variety of cellular activities AB57_0193 SM00382 ATPases associated with a variety of cellular activities AB57_0197 SM00342 helix_turn_helix, arabinose operon control protein AB57_0217 SM00422 helix_turn_helix, mercury resistance AB57_0220 SM00729 Elongator protein 3, MiaB family, Radical SAM AB57_0225 SM00641 Glycosyl hydrolases family 25 AB57_0228 SM01091 Transporter associated domain AB57_0240 SM01130 AB57_0240 AB57_0241 SM01007 Class II Aldolase and Adducin N-terminal domain AB57_0242 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_0254 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB57_0309 SM00938 Nitrogen regulatory protein P-II AB57_0322 SM00245 tail specific protease AB57_0323 SM00382 ATPases associated with a variety of cellular activities AB57_0323 SM00448 cheY-homologous receiver domain AB57_0324 SM00387 Histidine kinase-like ATPases AB57_0324 SM00388 His Kinase A (phosphoacceptor) domain AB57_0325 SM00421 helix_turn_helix, Lux Regulon AB57_0325 SM00448 cheY-homologous receiver domain AB57_0331 SM00899 AB57_0331 AB57_0349 SM00448 cheY-homologous receiver domain AB57_0349 SM00850 LytTr DNA-binding domain AB57_0355 SM00528 Domain in histone-like proteins of HNS family AB57_0357 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB57_0359 SM00240 Forkhead associated domain AB57_0364 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AB57_0364 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AB57_0365 SM00649 Ribosomal protein L11/L12 AB57_0370 SM00663 RNA polymerase I subunit A N-terminus AB57_0378 SM00387 Histidine kinase-like ATPases AB57_0383 SM00422 helix_turn_helix, mercury resistance AB57_0391 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB57_0391 SM00465 GIY-YIG type nucleases (URI domain) AB57_0394 SM00342 helix_turn_helix, arabinose operon control protein AB57_0396 SM00346 helix_turn_helix isocitrate lyase regulation AB57_0400 SM00732 Likely ribonuclease with RNase H fold. AB57_0403 SM00028 Tetratricopeptide repeats AB57_0405 SM00967 RNA 2'-O ribose methyltransferase substrate binding AB57_0414 SM00316 Ribosomal protein S1-like RNA-binding domain AB57_0436 SM00382 ATPases associated with a variety of cellular activities AB57_0438 SM01387 AB57_0438 AB57_0439 SM00316 Ribosomal protein S1-like RNA-binding domain AB57_0439 SM00322 K homology RNA-binding domain AB57_0442 SM00271 DnaJ molecular chaperone homology domain AB57_0446 SM00487 DEAD-like helicases superfamily AB57_0446 SM00490 helicase superfamily c-terminal domain AB57_0452 SM00116 Domain in cystathionine beta-synthase and other proteins. AB57_0452 SM01091 Transporter associated domain AB57_0462 SM00849 Metallo-beta-lactamase superfamily AB57_0474 SM00729 Elongator protein 3, MiaB family, Radical SAM AB57_0478 SM00316 Ribosomal protein S1-like RNA-binding domain AB57_0481 SM00363 S4 RNA-binding domain AB57_0489 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB57_0497 SM01329 AB57_0497 AB57_0500 SM00316 Ribosomal protein S1-like RNA-binding domain AB57_0501 SM00342 helix_turn_helix, arabinose operon control protein AB57_05015 SM00422 helix_turn_helix, mercury resistance AB57_0503 SM00870 AB57_0503 AB57_0507 SM00859 Semialdehyde dehydrogenase, NAD binding domain AB57_0518 SM00829 Enoylreductase AB57_05180 SM00073 Histidine Phosphotransfer domain AB57_05180 SM00387 Histidine kinase-like ATPases AB57_05180 SM00388 His Kinase A (phosphoacceptor) domain AB57_05180 SM00448 cheY-homologous receiver domain AB57_05205 SM00347 helix_turn_helix multiple antibiotic resistance protein AB57_0521 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AB57_0521 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AB57_0521 SM00493 AB57_0521 AB57_05245 SM00843 AB57_05245 AB57_0525 SM00360 RNA recognition motif AB57_05465 SM00796 Allophanate hydrolase subunit 1 AB57_05465 SM00797 Allophanate hydrolase subunit 2 AB57_05465 SM00878 Biotin carboxylase C-terminal domain AB57_05610 SM00342 helix_turn_helix, arabinose operon control protein AB57_0573 SM00671 Sel1-like repeats. AB57_0576 SM00917 LeuA allosteric (dimerisation) domain AB57_0577 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AB57_0581 SM00382 ATPases associated with a variety of cellular activities AB57_0581 SM00994 ClpX C4-type zinc finger AB57_0581 SM01086 C-terminal, D2-small domain, of ClpB protein AB57_0596 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB57_0596 SM00245 tail specific protease AB57_05965 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AB57_0598 SM00014 Acid phosphatase homologues AB57_0600 SM00562 AB57_0600 AB57_06015 SM00257 Lysin motif AB57_0602 SM00028 Tetratricopeptide repeats AB57_06040 SM00387 Histidine kinase-like ATPases AB57_06050 SM00387 Histidine kinase-like ATPases AB57_06050 SM00433 TopoisomeraseII AB57_0607 SM00564 beta-propeller repeat AB57_06070 SM00226 Low molecular weight phosphatase family AB57_06080 SM00984 UDP binding domain AB57_0612 SM00450 Rhodanese Homology Domain AB57_0614 SM00479 AB57_0614 AB57_06155 SM00984 UDP binding domain AB57_0618 SM00382 ATPases associated with a variety of cellular activities AB57_06180 SM00434 DNA Topoisomerase IV AB57_06195 SM00382 ATPases associated with a variety of cellular activities AB57_06220 SM00226 Low molecular weight phosphatase family AB57_06230 SM00422 helix_turn_helix, mercury resistance AB57_06250 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AB57_06250 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AB57_06250 SM00493 AB57_06250 AB57_0627 SM00052 Putative diguanylate phosphodiesterase AB57_0627 SM00267 diguanylate cyclase AB57_06275 SM00422 helix_turn_helix, mercury resistance AB57_0630 SM01236 AB57_0630 AB57_06315 SM01059 Chloramphenicol acetyltransferase AB57_06330 SM00857 Resolvase, N terminal domain AB57_06350 SM00857 Resolvase, N terminal domain AB57_06385 SM00857 Resolvase, N terminal domain AB57_06395 SM00422 helix_turn_helix, mercury resistance AB57_06470 SM00382 ATPases associated with a variety of cellular activities AB57_06485 SM00838 Elongation factor G C-terminus AB57_06485 SM00889 Elongation factor G, domain IV AB57_06505 SM00382 ATPases associated with a variety of cellular activities AB57_06540 SM00434 DNA Topoisomerase IV AB57_06560 SM01382 AB57_06560 AB57_06560 SM01383 AB57_06560 AB57_0659 SM00746 metallochaperone-like domain AB57_0660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB57_0660 SM00387 Histidine kinase-like ATPases AB57_0660 SM00388 His Kinase A (phosphoacceptor) domain AB57_0661 SM00448 cheY-homologous receiver domain AB57_0661 SM00862 Transcriptional regulatory protein, C terminal AB57_0665 SM00530 Helix-turn-helix XRE-family like proteins AB57_0670 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AB57_0670 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AB57_0683 SM00954 Region found in RelA / SpoT proteins AB57_0686 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB57_0695 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AB57_0705 SM00873 B3/4 domain AB57_0705 SM00874 tRNA synthetase B5 domain AB57_0705 SM00896 Ferredoxin-fold anticodon binding domain AB57_0706 SM00411 bacterial (prokaryotic) histone like domain AB57_0708 SM00357 Cold shock protein domain AB57_0708 SM00382 ATPases associated with a variety of cellular activities AB57_0708 SM00959 Rho termination factor, N-terminal domain AB57_0712 SM00977 TilS substrate C-terminal domain AB57_0715 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AB57_0715 SM00474 3'-5' exonuclease AB57_0715 SM00475 5'-3' exonuclease AB57_0715 SM00482 DNA polymerase A domain AB57_0719 SM00382 ATPases associated with a variety of cellular activities AB57_0726 SM00331 Sigma factor PP2C-like phosphatases AB57_0777 SM00342 helix_turn_helix, arabinose operon control protein AB57_0783 SM00903 Flavin reductase like domain AB57_0796 SM00448 cheY-homologous receiver domain AB57_0796 SM00862 Transcriptional regulatory protein, C terminal AB57_0797 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB57_0797 SM00387 Histidine kinase-like ATPases AB57_0797 SM00388 His Kinase A (phosphoacceptor) domain AB57_0799 SM00267 diguanylate cyclase AB57_0804 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AB57_0805 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AB57_0805 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AB57_0814 SM00357 Cold shock protein domain AB57_0844 SM00382 ATPases associated with a variety of cellular activities AB57_0844 SM00962 SRP54-type protein, GTPase domain AB57_0844 SM00963 SRP54-type protein, helical bundle domain AB57_0848 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_0850 SM00771 ZipA, C-terminal domain (FtsZ-binding) AB57_0851 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB57_0851 SM00292 breast cancer carboxy-terminal domain AB57_0851 SM00532 Ligase N family AB57_0862 SM00363 S4 RNA-binding domain AB57_0870 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AB57_0871 SM00822 AB57_0871 AB57_0873 SM00257 Lysin motif AB57_0882 SM01400 AB57_0882 AB57_0885 SM00028 Tetratricopeptide repeats AB57_0886 SM00400 zinc finger AB57_0886 SM00493 AB57_0886 AB57_0889 SM00363 S4 RNA-binding domain AB57_0897 SM01329 AB57_0897 AB57_0909 SM00825 Beta-ketoacyl synthase AB57_0931 SM00563 Phosphate acyltransferases AB57_0945 SM00382 ATPases associated with a variety of cellular activities AB57_0954 SM01004 Delta-aminolevulinic acid dehydratase AB57_0963 SM01040 BRO family, N-terminal domain AB57_0983 SM01130 AB57_0983 AB57_0987 SM00965 Secretin and TonB N terminus short domain AB57_1012 SM01322 AB57_1012 AB57_1020 SM00346 helix_turn_helix isocitrate lyase regulation AB57_1039 SM00342 helix_turn_helix, arabinose operon control protein AB57_1044 SM00822 AB57_1044 AB57_1047 SM00861 Transketolase, pyrimidine binding domain AB57_1048 SM01018 B12 binding domain AB57_1063 SM00947 Carbonic anhydrase AB57_1065 SM00382 ATPases associated with a variety of cellular activities AB57_1085 SM01091 Transporter associated domain AB57_1095 SM00988 UreE urease accessory protein, N-terminal domain AB57_1105 SM00478 endonuclease III AB57_1107 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB57_1111 SM00382 ATPases associated with a variety of cellular activities AB57_1111 SM00464 Found in ATP-dependent protease La (LON) AB57_1119 SM01011 Aminopeptidase P, N-terminal domain AB57_1124 SM00422 helix_turn_helix, mercury resistance AB57_1135 SM00479 AB57_1135 AB57_1136 SM00257 Lysin motif AB57_1140 SM00382 ATPases associated with a variety of cellular activities AB57_1149 SM00479 AB57_1149 AB57_1151 SM00267 diguanylate cyclase AB57_1169 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_1169 SM00895 AB57_1169 AB57_1172 SM00344 helix_turn_helix ASNC type AB57_1179 SM00342 helix_turn_helix, arabinose operon control protein AB57_1181 SM00858 AB57_1181 AB57_1183 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AB57_1185 SM01130 AB57_1185 AB57_1187 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_1187 SM00895 AB57_1187 AB57_1197 SM00347 helix_turn_helix multiple antibiotic resistance protein AB57_1198 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_1198 SM00895 AB57_1198 AB57_1207 SM00342 helix_turn_helix, arabinose operon control protein AB57_1232 SM00479 AB57_1232 AB57_1248 SM00382 ATPases associated with a variety of cellular activities AB57_1252 SM00530 Helix-turn-helix XRE-family like proteins AB57_1294 SM00487 DEAD-like helicases superfamily AB57_1311 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AB57_1312 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB57_1315 SM00788 Adenylosuccinate synthetase AB57_1318 SM00100 Cyclic nucleotide-monophosphate binding domain AB57_1318 SM00419 helix_turn_helix, cAMP Regulatory protein AB57_1322 SM00382 ATPases associated with a variety of cellular activities AB57_1322 SM01086 C-terminal, D2-small domain, of ClpB protein AB57_1325 SM00981 AB57_1325 AB57_1342 SM00382 ATPases associated with a variety of cellular activities AB57_1342 SM00487 DEAD-like helicases superfamily AB57_1342 SM00490 helicase superfamily c-terminal domain AB57_1342 SM00847 Helicase associated domain (HA2) Add an annotation AB57_1354 SM00422 helix_turn_helix, mercury resistance AB57_1363 SM00530 Helix-turn-helix XRE-family like proteins AB57_1367 SM00357 Cold shock protein domain AB57_1396 SM00060 Fibronectin type 3 domain AB57_1397 SM00710 Parallel beta-helix repeats AB57_1408 SM00840 AB57_1408 AB57_1409 SM00116 Domain in cystathionine beta-synthase and other proteins. AB57_1413 SM00382 ATPases associated with a variety of cellular activities AB57_1415 SM00382 ATPases associated with a variety of cellular activities AB57_1424 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AB57_1424 SM00534 ATPase domain of DNA mismatch repair MUTS family AB57_1426 SM00344 helix_turn_helix ASNC type AB57_1455 SM00796 Allophanate hydrolase subunit 1 AB57_1455 SM00797 Allophanate hydrolase subunit 2 AB57_1456 SM00878 Biotin carboxylase C-terminal domain AB57_1458 SM00671 Sel1-like repeats. AB57_1463 SM00829 Enoylreductase AB57_1474 SM00382 ATPases associated with a variety of cellular activities AB57_1490 SM00382 ATPases associated with a variety of cellular activities AB57_1490 SM01086 C-terminal, D2-small domain, of ClpB protein AB57_1497 SM00248 ankyrin repeats AB57_1503 SM00422 helix_turn_helix, mercury resistance AB57_1505 SM01130 AB57_1505 AB57_1508 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_1508 SM00895 AB57_1508 AB57_1513 SM00342 helix_turn_helix, arabinose operon control protein AB57_1539 SM00357 Cold shock protein domain AB57_1549 SM01060 AB57_1549 AB57_1552 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_1552 SM00895 AB57_1552 AB57_1555 SM00903 Flavin reductase like domain AB57_1565 SM00346 helix_turn_helix isocitrate lyase regulation AB57_1567 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_1567 SM00866 AB57_1567 AB57_1569 SM00382 ATPases associated with a variety of cellular activities AB57_1577 SM00346 helix_turn_helix isocitrate lyase regulation AB57_1581 SM00346 helix_turn_helix isocitrate lyase regulation AB57_1588 SM00882 Coenzyme A transferase AB57_1589 SM00882 Coenzyme A transferase AB57_1598 SM00878 Biotin carboxylase C-terminal domain AB57_1616 SM01236 AB57_1616 AB57_1617 SM01060 AB57_1617 AB57_1621 SM00384 DNA binding domain with preference for A/T rich regions AB57_1625 SM00344 helix_turn_helix ASNC type AB57_1628 SM00387 Histidine kinase-like ATPases AB57_1628 SM00388 His Kinase A (phosphoacceptor) domain AB57_1628 SM00448 cheY-homologous receiver domain AB57_1629 SM00421 helix_turn_helix, Lux Regulon AB57_1629 SM00448 cheY-homologous receiver domain AB57_1633 SM00382 ATPases associated with a variety of cellular activities AB57_1634 SM00062 Bacterial periplasmic substrate-binding proteins AB57_1635 SM00062 Bacterial periplasmic substrate-binding proteins AB57_1641 SM00450 Rhodanese Homology Domain AB57_1642 SM00822 AB57_1642 AB57_1649 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_1660 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AB57_1664 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_1674 SM00062 Bacterial periplasmic substrate-binding proteins AB57_1675 SM00382 ATPases associated with a variety of cellular activities AB57_1680 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_1680 SM00895 AB57_1680 AB57_1686 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB57_1696 SM00481 DNA polymerase alpha chain like domain AB57_1697 SM00870 AB57_1697 AB57_1702 SM00342 helix_turn_helix, arabinose operon control protein AB57_1705 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB57_1712 SM00100 Cyclic nucleotide-monophosphate binding domain AB57_1712 SM00419 helix_turn_helix, cAMP Regulatory protein AB57_1716 SM00382 ATPases associated with a variety of cellular activities AB57_1716 SM00930 AB57_1716 AB57_1725 SM00062 Bacterial periplasmic substrate-binding proteins AB57_1728 SM00382 ATPases associated with a variety of cellular activities AB57_1730 SM00344 helix_turn_helix ASNC type AB57_1732 SM00563 Phosphate acyltransferases AB57_1734 SM01236 AB57_1734 AB57_1750 SM00729 Elongator protein 3, MiaB family, Radical SAM AB57_1750 SM00876 Biotin and Thiamin Synthesis associated domain AB57_1755 SM00530 Helix-turn-helix XRE-family like proteins AB57_1762 SM00861 Transketolase, pyrimidine binding domain AB57_1764 SM00867 YceI-like domain AB57_1771 SM00344 helix_turn_helix ASNC type AB57_1775 SM00342 helix_turn_helix, arabinose operon control protein AB57_1782 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB57_1784 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AB57_1796 SM00470 ParB-like nuclease domain AB57_1799 SM00382 ATPases associated with a variety of cellular activities AB57_1812 SM00986 Uracil DNA glycosylase superfamily AB57_1812 SM00987 UreE urease accessory protein, C-terminal domain AB57_1817 SM00316 Ribosomal protein S1-like RNA-binding domain AB57_1818 SM00411 bacterial (prokaryotic) histone like domain AB57_1821 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AB57_1823 SM00342 helix_turn_helix, arabinose operon control protein AB57_1837 SM00382 ATPases associated with a variety of cellular activities AB57_1848 SM00487 DEAD-like helicases superfamily AB57_1848 SM00490 helicase superfamily c-terminal domain AB57_1848 SM00982 AB57_1848 AB57_1848 SM01058 CarD-like/TRCF domain AB57_1850 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AB57_1853 SM00271 DnaJ molecular chaperone homology domain AB57_1860 SM00411 bacterial (prokaryotic) histone like domain AB57_1862 SM00342 helix_turn_helix, arabinose operon control protein AB57_1880 SM01006 Siderophore biosynthesis protein domain AB57_1886 SM00855 Phosphoglycerate mutase family AB57_1900 SM01324 AB57_1900 AB57_1910 SM00493 AB57_1910 AB57_1911 SM00341 Helicase and RNase D C-terminal AB57_1911 SM00474 3'-5' exonuclease AB57_1919 SM00382 ATPases associated with a variety of cellular activities AB57_1924 SM00267 diguanylate cyclase AB57_1927 SM00729 Elongator protein 3, MiaB family, Radical SAM AB57_1929 SM00861 Transketolase, pyrimidine binding domain AB57_1933 SM00829 Enoylreductase AB57_1935 SM00382 ATPases associated with a variety of cellular activities AB57_1936 SM00849 Metallo-beta-lactamase superfamily AB57_1942 SM00342 helix_turn_helix, arabinose operon control protein AB57_1945 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_1945 SM00866 AB57_1945 AB57_1950 SM00382 ATPases associated with a variety of cellular activities AB57_1951 SM00567 E-Z type HEAT repeats AB57_1962 SM00882 Coenzyme A transferase AB57_1963 SM00882 Coenzyme A transferase AB57_1968 SM00342 helix_turn_helix, arabinose operon control protein AB57_1973 SM00903 Flavin reductase like domain AB57_1975 SM00342 helix_turn_helix, arabinose operon control protein AB57_1982 SM00382 ATPases associated with a variety of cellular activities AB57_1992 SM00729 Elongator protein 3, MiaB family, Radical SAM AB57_1997 SM00155 Phospholipase D. Active site motifs. AB57_2002 SM00829 Enoylreductase AB57_2083 SM00448 cheY-homologous receiver domain AB57_2083 SM00862 Transcriptional regulatory protein, C terminal AB57_2084 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB57_2084 SM00387 Histidine kinase-like ATPases AB57_2084 SM00388 His Kinase A (phosphoacceptor) domain AB57_2087 SM00342 helix_turn_helix, arabinose operon control protein AB57_2089 SM00822 AB57_2089 AB57_2090 SM00822 AB57_2090 AB57_2099 SM00487 DEAD-like helicases superfamily AB57_2099 SM00490 helicase superfamily c-terminal domain AB57_2110 SM00421 helix_turn_helix, Lux Regulon AB57_2115 SM01400 AB57_2115 AB57_2133 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_2133 SM00866 AB57_2133 AB57_2140 SM00860 SMI1 / KNR4 family AB57_2160 SM00342 helix_turn_helix, arabinose operon control protein AB57_2166 SM00422 helix_turn_helix, mercury resistance AB57_2176 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_2176 SM00895 AB57_2176 AB57_2179 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AB57_2182 SM00882 Coenzyme A transferase AB57_2183 SM00882 Coenzyme A transferase AB57_2190 SM00342 helix_turn_helix, arabinose operon control protein AB57_2191 SM00903 Flavin reductase like domain AB57_2200 SM00347 helix_turn_helix multiple antibiotic resistance protein AB57_2205 SM00855 Phosphoglycerate mutase family AB57_2209 SM00346 helix_turn_helix isocitrate lyase regulation AB57_2210 SM00849 Metallo-beta-lactamase superfamily AB57_2214 SM00564 beta-propeller repeat AB57_2216 SM00710 Parallel beta-helix repeats AB57_2223 SM00998 Adenylosuccinate lyase C-terminus AB57_2225 SM00882 Coenzyme A transferase AB57_2226 SM00882 Coenzyme A transferase AB57_2230 SM01192 AB57_2230 AB57_2230 SM01193 AB57_2230 AB57_2244 SM00382 ATPases associated with a variety of cellular activities AB57_2244 SM01086 C-terminal, D2-small domain, of ClpB protein AB57_2247 SM00859 Semialdehyde dehydrogenase, NAD binding domain AB57_2256 SM01264 AB57_2256 AB57_2267 SM00382 ATPases associated with a variety of cellular activities AB57_2267 SM00962 SRP54-type protein, GTPase domain AB57_2267 SM00963 SRP54-type protein, helical bundle domain AB57_2273 SM00116 Domain in cystathionine beta-synthase and other proteins. AB57_2289 SM00347 helix_turn_helix multiple antibiotic resistance protein AB57_2291 SM00052 Putative diguanylate phosphodiesterase AB57_2291 SM00091 PAS domain AB57_2291 SM00267 diguanylate cyclase AB57_2300 SM00344 helix_turn_helix ASNC type AB57_2306 SM00363 S4 RNA-binding domain AB57_2313 SM00935 Outer membrane protein (OmpH-like) AB57_2315 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB57_2321 SM00729 Elongator protein 3, MiaB family, Radical SAM AB57_2323 SM00091 PAS domain AB57_2323 SM00387 Histidine kinase-like ATPases AB57_2323 SM00388 His Kinase A (phosphoacceptor) domain AB57_2324 SM00382 ATPases associated with a variety of cellular activities AB57_2324 SM00448 cheY-homologous receiver domain AB57_2342 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_2344 SM00852 Probable molybdopterin binding domain AB57_2345 SM00852 Probable molybdopterin binding domain AB57_2348 SM00729 Elongator protein 3, MiaB family, Radical SAM AB57_2349 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AB57_2351 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AB57_2354 SM00448 cheY-homologous receiver domain AB57_2354 SM01012 AB57_2354 AB57_2360 SM00878 Biotin carboxylase C-terminal domain AB57_2363 SM01236 AB57_2363 AB57_2372 SM00226 Low molecular weight phosphatase family AB57_2377 SM00382 ATPases associated with a variety of cellular activities AB57_2382 SM00822 AB57_2382 AB57_2388 SM00344 helix_turn_helix ASNC type AB57_2391 SM00831 Cation transporter/ATPase, N-terminus AB57_2396 SM00382 ATPases associated with a variety of cellular activities AB57_2414 SM00344 helix_turn_helix ASNC type AB57_2416 SM00830 Chorismate mutase type II AB57_2420 SM00972 Spore Coat Protein U domain AB57_2423 SM00972 Spore Coat Protein U domain AB57_2429 SM00382 ATPases associated with a variety of cellular activities AB57_2432 SM00862 Transcriptional regulatory protein, C terminal AB57_2448 SM00853 MutL C terminal dimerisation domain AB57_2448 SM01340 AB57_2448 AB57_2452 SM00363 S4 RNA-binding domain AB57_2469 SM01230 AB57_2469 AB57_2470 SM00448 cheY-homologous receiver domain AB57_2470 SM00862 Transcriptional regulatory protein, C terminal AB57_2471 SM00387 Histidine kinase-like ATPases AB57_2471 SM00388 His Kinase A (phosphoacceptor) domain AB57_2476 SM00905 Dihydroneopterin aldolase AB57_2479 SM00903 Flavin reductase like domain AB57_2482 SM00822 AB57_2482 AB57_2483 SM00342 helix_turn_helix, arabinose operon control protein AB57_2484 SM00062 Bacterial periplasmic substrate-binding proteins AB57_2488 SM00937 AB57_2488 AB57_2513 SM01005 Alanine racemase, C-terminal domain AB57_2515 SM00460 Transglutaminase/protease-like homologues AB57_2520 SM01228 AB57_2520 AB57_2525 SM00798 AICARFT/IMPCHase bienzyme AB57_2525 SM00851 MGS-like domain AB57_2526 SM01209 AB57_2526 AB57_2526 SM01210 AB57_2526 AB57_2528 SM00382 ATPases associated with a variety of cellular activities AB57_2528 SM00930 AB57_2528 AB57_2530 SM00849 Metallo-beta-lactamase superfamily AB57_2542 SM00388 His Kinase A (phosphoacceptor) domain AB57_2543 SM00448 cheY-homologous receiver domain AB57_2543 SM00862 Transcriptional regulatory protein, C terminal AB57_2550 SM00387 Histidine kinase-like ATPases AB57_2550 SM00388 His Kinase A (phosphoacceptor) domain AB57_2551 SM00448 cheY-homologous receiver domain AB57_2551 SM00862 Transcriptional regulatory protein, C terminal AB57_2553 SM00095 Transthyretin AB57_2565 SM00972 Spore Coat Protein U domain AB57_2570 SM00972 Spore Coat Protein U domain AB57_2573 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_2573 SM00895 AB57_2573 AB57_2582 SM00342 helix_turn_helix, arabinose operon control protein AB57_2585 SM01034 Sensors of blue-light using FAD AB57_2596 SM00220 Serine/Threonine protein kinases, catalytic domain AB57_2613 SM00855 Phosphoglycerate mutase family AB57_2617 SM00487 DEAD-like helicases superfamily AB57_2617 SM00490 helicase superfamily c-terminal domain AB57_2618 SM00357 Cold shock protein domain AB57_2631 SM00830 Chorismate mutase type II AB57_2643 SM00387 Histidine kinase-like ATPases AB57_2643 SM00388 His Kinase A (phosphoacceptor) domain AB57_2644 SM00448 cheY-homologous receiver domain AB57_2644 SM00862 Transcriptional regulatory protein, C terminal AB57_2646 SM00382 ATPases associated with a variety of cellular activities AB57_2651 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_2659 SM00062 Bacterial periplasmic substrate-binding proteins AB57_2668 SM00479 AB57_2668 AB57_2722 SM00382 ATPases associated with a variety of cellular activities AB57_2728 SM00530 Helix-turn-helix XRE-family like proteins AB57_2744 SM00382 ATPases associated with a variety of cellular activities AB57_2753 SM00342 helix_turn_helix, arabinose operon control protein AB57_2763 SM00729 Elongator protein 3, MiaB family, Radical SAM AB57_2767 SM00996 S-adenosyl-L-homocysteine hydrolase AB57_2767 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AB57_2772 SM00052 Putative diguanylate phosphodiesterase AB57_2772 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AB57_2772 SM00091 PAS domain AB57_2772 SM00267 diguanylate cyclase AB57_2773 SM00919 Malic enzyme, NAD binding domain AB57_2773 SM01274 AB57_2773 AB57_2775 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB57_2783 SM01230 AB57_2783 AB57_2791 SM00463 Small MutS-related domain AB57_2793 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AB57_2794 SM01092 CO dehydrogenase flavoprotein C-terminal domain AB57_2805 SM00382 ATPases associated with a variety of cellular activities AB57_2806 SM00382 ATPases associated with a variety of cellular activities AB57_2815 SM00382 ATPases associated with a variety of cellular activities AB57_2848 SM00841 Elongation factor P, C-terminal AB57_2848 SM01185 AB57_2848 AB57_2852 SM00052 Putative diguanylate phosphodiesterase AB57_2859 SM00257 Lysin motif AB57_2863 SM00936 Penicillin-binding protein 5, C-terminal domain AB57_2872 SM00382 ATPases associated with a variety of cellular activities AB57_2878 SM00344 helix_turn_helix ASNC type AB57_2892 SM00487 DEAD-like helicases superfamily AB57_2892 SM00490 helicase superfamily c-terminal domain AB57_2908 SM00880 AB57_2908 AB57_2908 SM01118 AB57_2908 AB57_2919 SM01329 AB57_2919 AB57_2940 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AB57_2944 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB57_2947 SM00487 DEAD-like helicases superfamily AB57_2947 SM00490 helicase superfamily c-terminal domain AB57_2949 SM00267 diguanylate cyclase AB57_2961 SM00358 Double-stranded RNA binding motif AB57_2961 SM00535 Ribonuclease III family AB57_2964 SM00838 Elongation factor G C-terminus AB57_2966 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB57_2977 SM00382 ATPases associated with a variety of cellular activities AB57_2992 SM01211 AB57_2992 AB57_2993 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB57_2994 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB57_2995 SM00382 ATPases associated with a variety of cellular activities AB57_3020 SM00849 Metallo-beta-lactamase superfamily AB57_3021 SM00382 ATPases associated with a variety of cellular activities AB57_3038 SM00893 Electron transfer flavoprotein domain AB57_3039 SM00893 Electron transfer flavoprotein domain AB57_3048 SM00382 ATPases associated with a variety of cellular activities AB57_3049 SM00978 AB57_3049 AB57_3077 SM00849 Metallo-beta-lactamase superfamily AB57_3080 SM00883 Chaperonin 10 Kd subunit AB57_3084 SM00046 Diacylglycerol kinase catalytic domain (presumed) AB57_3096 SM00382 ATPases associated with a variety of cellular activities AB57_3098 SM01103 AB57_3098 AB57_3101 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AB57_3102 SM00851 MGS-like domain AB57_3102 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AB57_3109 SM00854 Bacterial capsule synthesis protein PGA_cap AB57_3122 SM00881 CoA binding domain AB57_3126 SM00861 Transketolase, pyrimidine binding domain AB57_3134 SM00450 Rhodanese Homology Domain AB57_3155 SM00014 Acid phosphatase homologues AB57_3162 SM00822 AB57_3162 AB57_3172 SM00387 Histidine kinase-like ATPases AB57_3172 SM00388 His Kinase A (phosphoacceptor) domain AB57_3173 SM00448 cheY-homologous receiver domain AB57_3173 SM00862 Transcriptional regulatory protein, C terminal AB57_3177 SM00563 Phosphate acyltransferases AB57_3180 SM00244 prohibitin homologues AB57_3202 SM01252 AB57_3202 AB57_3208 SM00530 Helix-turn-helix XRE-family like proteins AB57_3233 SM00954 Region found in RelA / SpoT proteins AB57_3238 SM00990 AB57_3238 AB57_3246 SM00382 ATPases associated with a variety of cellular activities AB57_3266 SM00829 Enoylreductase AB57_3267 SM00342 helix_turn_helix, arabinose operon control protein AB57_3271 SM00342 helix_turn_helix, arabinose operon control protein AB57_3279 SM00316 Ribosomal protein S1-like RNA-binding domain AB57_3286 SM00845 GatB domain AB57_3309 SM00729 Elongator protein 3, MiaB family, Radical SAM AB57_3311 SM00073 Histidine Phosphotransfer domain AB57_3311 SM00260 Two component signalling adaptor domain AB57_3311 SM00387 Histidine kinase-like ATPases AB57_3311 SM00448 cheY-homologous receiver domain AB57_3311 SM01231 AB57_3311 AB57_3312 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AB57_3313 SM00260 Two component signalling adaptor domain AB57_3314 SM00448 cheY-homologous receiver domain AB57_3315 SM00448 cheY-homologous receiver domain AB57_3326 SM00671 Sel1-like repeats. AB57_3332 SM01232 AB57_3332 AB57_3336 SM00838 Elongation factor G C-terminus AB57_3351 SM00564 beta-propeller repeat AB57_3355 SM00342 helix_turn_helix, arabinose operon control protein AB57_3366 SM00957 SecA DEAD-like domain AB57_3366 SM00958 SecA preprotein cross-linking domain AB57_3368 SM00849 Metallo-beta-lactamase superfamily AB57_3374 SM00342 helix_turn_helix, arabinose operon control protein AB57_3387 SM00448 cheY-homologous receiver domain AB57_3387 SM00862 Transcriptional regulatory protein, C terminal AB57_3388 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB57_3388 SM00387 Histidine kinase-like ATPases AB57_3388 SM00388 His Kinase A (phosphoacceptor) domain AB57_3411 SM00387 Histidine kinase-like ATPases AB57_3411 SM00388 His Kinase A (phosphoacceptor) domain AB57_3416 SM01323 AB57_3416 AB57_3423 SM00481 DNA polymerase alpha chain like domain AB57_3427 SM00450 Rhodanese Homology Domain AB57_3439 SM00267 diguanylate cyclase AB57_3442 SM00155 Phospholipase D. Active site motifs. AB57_3443 SM00563 Phosphate acyltransferases AB57_3449 SM00650 Ribosomal RNA adenine dimethylases AB57_3456 SM00878 Biotin carboxylase C-terminal domain AB57_3471 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AB57_3477 SM00729 Elongator protein 3, MiaB family, Radical SAM AB57_3487 SM00342 helix_turn_helix, arabinose operon control protein AB57_3493 SM00316 Ribosomal protein S1-like RNA-binding domain AB57_3493 SM00955 AB57_3493 AB57_3505 SM00662 RNA polymerases D AB57_3506 SM00363 S4 RNA-binding domain AB57_3506 SM01390 AB57_3506 AB57_3519 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AB57_3520 SM01374 AB57_3520 AB57_3524 SM00322 K homology RNA-binding domain AB57_3531 SM01403 AB57_3531 AB57_3541 SM00563 Phosphate acyltransferases AB57_3544 SM00487 DEAD-like helicases superfamily AB57_3544 SM00490 helicase superfamily c-terminal domain AB57_3554 SM00382 ATPases associated with a variety of cellular activities AB57_3556 SM00487 DEAD-like helicases superfamily AB57_3556 SM00490 helicase superfamily c-terminal domain AB57_3558 SM00861 Transketolase, pyrimidine binding domain AB57_3566 SM00116 Domain in cystathionine beta-synthase and other proteins. AB57_3588 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB57_3627 SM00072 Guanylate kinase homologues. AB57_3628 SM01409 AB57_3628 AB57_3629 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB57_3629 SM00954 Region found in RelA / SpoT proteins AB57_3644 SM00965 Secretin and TonB N terminus short domain AB57_3648 SM00842 Cell division protein FtsA AB57_3672 SM00382 ATPases associated with a variety of cellular activities AB57_3675 SM00947 Carbonic anhydrase AB57_3676 SM00316 Ribosomal protein S1-like RNA-binding domain AB57_3676 SM00732 Likely ribonuclease with RNase H fold. AB57_3677 SM00448 cheY-homologous receiver domain AB57_3677 SM00862 Transcriptional regulatory protein, C terminal AB57_3678 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB57_3678 SM00387 Histidine kinase-like ATPases AB57_3678 SM00388 His Kinase A (phosphoacceptor) domain AB57_3685 SM00474 3'-5' exonuclease AB57_3688 SM00530 Helix-turn-helix XRE-family like proteins AB57_3691 SM00357 Cold shock protein domain AB57_3695 SM00342 helix_turn_helix, arabinose operon control protein AB57_3700 SM00477 DNA/RNA non-specific endonuclease AB57_3700 SM00892 DNA/RNA non-specific endonuclease AB57_3705 SM00342 helix_turn_helix, arabinose operon control protein AB57_3713 SM00342 helix_turn_helix, arabinose operon control protein AB57_3729 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_3731 SM00530 Helix-turn-helix XRE-family like proteins AB57_3740 SM00829 Enoylreductase AB57_3743 SM00267 diguanylate cyclase AB57_3749 SM00387 Histidine kinase-like ATPases AB57_3749 SM00388 His Kinase A (phosphoacceptor) domain AB57_3749 SM00448 cheY-homologous receiver domain AB57_3751 SM00421 helix_turn_helix, Lux Regulon AB57_3751 SM00448 cheY-homologous receiver domain AB57_3754 SM00344 helix_turn_helix ASNC type AB57_3763 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB57_3765 SM00937 AB57_3765 AB57_3770 SM00116 Domain in cystathionine beta-synthase and other proteins. AB57_3770 SM01240 AB57_3770 AB57_3772 SM00849 Metallo-beta-lactamase superfamily AB57_3782 SM00864 Tubulin/FtsZ family, GTPase domain AB57_3782 SM00865 Tubulin/FtsZ family, C-terminal domain AB57_3783 SM00842 Cell division protein FtsA AB57_3797 SM00267 diguanylate cyclase AB57_3809 SM00387 Histidine kinase-like ATPases AB57_3809 SM00433 TopoisomeraseII AB57_3827 SM00448 cheY-homologous receiver domain AB57_3827 SM00862 Transcriptional regulatory protein, C terminal AB57_3828 SM00387 Histidine kinase-like ATPases AB57_3828 SM00388 His Kinase A (phosphoacceptor) domain AB57_3831 SM00450 Rhodanese Homology Domain AB57_3862 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_3862 SM00866 AB57_3862 AB57_3864 SM00833 Cobalamin synthesis protein cobW C-terminal domain AB57_3870 SM00346 helix_turn_helix isocitrate lyase regulation AB57_3876 SM01130 AB57_3876 AB57_3881 SM00382 ATPases associated with a variety of cellular activities AB57_3887 SM00478 endonuclease III AB57_3887 SM00525 AB57_3887 AB57_3891 SM00829 Enoylreductase AB57_3892 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB57_3901 SM00271 DnaJ molecular chaperone homology domain AB57_3923 SM00671 Sel1-like repeats.