IX88_13530 be9c639176ed11124e5dc020656f4c41 400 Gene3D G3DSA:1.20.1250.20 16 396 7.3E-26 T 11-10-2018 IX88_13530 be9c639176ed11124e5dc020656f4c41 400 Pfam PF07690 Major Facilitator Superfamily 27 348 6.4E-20 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_13530 be9c639176ed11124e5dc020656f4c41 400 SUPERFAMILY SSF103473 23 399 1.57E-32 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_18080 129056a38cc6cb57d5dd59129f02935d 647 SUPERFAMILY SSF48435 26 477 5.62E-88 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 IX88_18080 129056a38cc6cb57d5dd59129f02935d 647 Pfam PF01464 Transglycosylase SLT domain 489 590 2.3E-20 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 IX88_18080 129056a38cc6cb57d5dd59129f02935d 647 SUPERFAMILY SSF53955 485 633 1.74E-39 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily IX88_18080 129056a38cc6cb57d5dd59129f02935d 647 Gene3D G3DSA:1.10.530.10 474 639 1.5E-38 T 11-10-2018 IX88_18080 129056a38cc6cb57d5dd59129f02935d 647 Gene3D G3DSA:1.25.20.10 24 383 1.1E-52 T 11-10-2018 IX88_09770 f032d44bc54b1b1ad3f594b225187079 210 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 28 208 2.3E-49 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 IX88_09770 f032d44bc54b1b1ad3f594b225187079 210 Pfam PF02527 rRNA small subunit methyltransferase G 26 204 2.3E-51 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 IX88_09770 f032d44bc54b1b1ad3f594b225187079 210 Gene3D G3DSA:3.40.50.150 3 210 2.5E-64 T 11-10-2018 IX88_09770 f032d44bc54b1b1ad3f594b225187079 210 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 206 26.817 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 IX88_09770 f032d44bc54b1b1ad3f594b225187079 210 SUPERFAMILY SSF53335 7 209 1.44E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_09770 f032d44bc54b1b1ad3f594b225187079 210 PIRSF PIRSF003078 1 210 4.3E-51 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 IX88_05980 0fcb0c830e414e4bf289aab2f297b6ff 1149 Gene3D G3DSA:3.40.50.300 924 1144 8.3E-47 T 11-10-2018 IX88_05980 0fcb0c830e414e4bf289aab2f297b6ff 1149 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1137 4.9E-278 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 IX88_05980 0fcb0c830e414e4bf289aab2f297b6ff 1149 SUPERFAMILY SSF52540 1 1122 7.23E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_05980 0fcb0c830e414e4bf289aab2f297b6ff 1149 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1139 21.714 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 IX88_05980 0fcb0c830e414e4bf289aab2f297b6ff 1149 PIRSF PIRSF005719 1 1144 2.9E-235 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein IX88_05980 0fcb0c830e414e4bf289aab2f297b6ff 1149 Gene3D G3DSA:3.40.50.300 1 267 4.0E-53 T 11-10-2018 IX88_05980 0fcb0c830e414e4bf289aab2f297b6ff 1149 SUPERFAMILY SSF75553 457 626 1.7E-6 T 11-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 IX88_05980 0fcb0c830e414e4bf289aab2f297b6ff 1149 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1130 5.9E-54 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal IX88_11620 546b2d41d7fde66bbbaedfc96345f054 451 SUPERFAMILY SSF48557 4 444 1.02E-118 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 IX88_11620 546b2d41d7fde66bbbaedfc96345f054 451 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 4 348 5.4E-116 T 11-10-2018 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 IX88_11620 546b2d41d7fde66bbbaedfc96345f054 451 Gene3D G3DSA:1.10.40.30 363 443 1.0E-31 T 11-10-2018 IX88_11620 546b2d41d7fde66bbbaedfc96345f054 451 Gene3D G3DSA:1.20.200.10 106 361 6.9E-101 T 11-10-2018 IX88_11620 546b2d41d7fde66bbbaedfc96345f054 451 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.5E-21 T 11-10-2018 IPR000362 Fumarate lyase family IX88_11620 546b2d41d7fde66bbbaedfc96345f054 451 PRINTS PR00149 Fumarate lyase superfamily signature 101 119 2.5E-21 T 11-10-2018 IPR000362 Fumarate lyase family IX88_11620 546b2d41d7fde66bbbaedfc96345f054 451 PRINTS PR00149 Fumarate lyase superfamily signature 231 258 2.5E-21 T 11-10-2018 IPR000362 Fumarate lyase family IX88_11620 546b2d41d7fde66bbbaedfc96345f054 451 PRINTS PR00149 Fumarate lyase superfamily signature 146 164 2.5E-21 T 11-10-2018 IPR000362 Fumarate lyase family IX88_11620 546b2d41d7fde66bbbaedfc96345f054 451 Pfam PF00206 Lyase 15 299 2.4E-56 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal IX88_11620 546b2d41d7fde66bbbaedfc96345f054 451 Gene3D G3DSA:1.10.275.10 7 105 7.1E-36 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal IX88_11620 546b2d41d7fde66bbbaedfc96345f054 451 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 5.4E-9 T 11-10-2018 IX88_11620 546b2d41d7fde66bbbaedfc96345f054 451 PRINTS PR00145 Argininosuccinate lyase family signature 100 122 5.4E-9 T 11-10-2018 IX88_11620 546b2d41d7fde66bbbaedfc96345f054 451 PRINTS PR00145 Argininosuccinate lyase family signature 141 161 5.4E-9 T 11-10-2018 IX88_11620 546b2d41d7fde66bbbaedfc96345f054 451 PRINTS PR00145 Argininosuccinate lyase family signature 231 255 5.4E-9 T 11-10-2018 IX88_11620 546b2d41d7fde66bbbaedfc96345f054 451 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 IX88_11620 546b2d41d7fde66bbbaedfc96345f054 451 SMART SM00998 364 443 5.1E-29 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 IX88_11620 546b2d41d7fde66bbbaedfc96345f054 451 Pfam PF10397 Adenylosuccinate lyase C-terminus 365 442 1.0E-19 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 IX88_05515 08ab36304db12356b537c785842d12a9 406 SUPERFAMILY SSF56266 14 403 6.41E-140 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 IX88_05515 08ab36304db12356b537c785842d12a9 406 Gene3D G3DSA:3.60.70.12 7 276 8.3E-90 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 IX88_05515 08ab36304db12356b537c785842d12a9 406 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 12 406 1.3E-125 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 IX88_05515 08ab36304db12356b537c785842d12a9 406 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 406 152.943 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 IX88_05515 08ab36304db12356b537c785842d12a9 406 Pfam PF01960 ArgJ family 20 406 2.1E-143 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 IX88_05515 08ab36304db12356b537c785842d12a9 406 Gene3D G3DSA:3.10.20.340 277 406 9.1E-45 T 11-10-2018 IX88_05515 08ab36304db12356b537c785842d12a9 406 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 31 404 6.0E-177 T 11-10-2018 IX88_01470 95744996f02f4123aa61905e3cae088d 314 Gene3D G3DSA:3.30.1490.20 136 200 3.0E-108 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 IX88_01470 95744996f02f4123aa61905e3cae088d 314 SUPERFAMILY SSF56059 122 309 2.5E-55 T 11-10-2018 IX88_01470 95744996f02f4123aa61905e3cae088d 314 Gene3D G3DSA:3.30.470.20 114 294 3.0E-108 T 11-10-2018 IX88_01470 95744996f02f4123aa61905e3cae088d 314 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 310 4.2E-128 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 IX88_01470 95744996f02f4123aa61905e3cae088d 314 SUPERFAMILY SSF52440 1 121 4.32E-40 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily IX88_01470 95744996f02f4123aa61905e3cae088d 314 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 119 6.7E-40 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 IX88_01470 95744996f02f4123aa61905e3cae088d 314 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 123 296 1.6E-75 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 IX88_01470 95744996f02f4123aa61905e3cae088d 314 Gene3D G3DSA:3.40.50.20 6 113 3.0E-108 T 11-10-2018 IX88_01470 95744996f02f4123aa61905e3cae088d 314 Hamap MF_00162 Glutathione synthetase [gshB]. 1 314 157.701 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 IX88_08815 df8ac8468050e5d34a55d86bd001418f 390 SUPERFAMILY SSF47203 233 388 9.67E-45 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_08815 df8ac8468050e5d34a55d86bd001418f 390 PIRSF PIRSF016578 12 390 4.2E-17 T 11-10-2018 IX88_08815 df8ac8468050e5d34a55d86bd001418f 390 Gene3D G3DSA:1.10.540.10 2 125 2.2E-46 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_08815 df8ac8468050e5d34a55d86bd001418f 390 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 IX88_08815 df8ac8468050e5d34a55d86bd001418f 390 SUPERFAMILY SSF56645 5 247 8.51E-87 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_08815 df8ac8468050e5d34a55d86bd001418f 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 385 1.1E-39 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_08815 df8ac8468050e5d34a55d86bd001418f 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 123 7.0E-37 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_08815 df8ac8468050e5d34a55d86bd001418f 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 IX88_08815 df8ac8468050e5d34a55d86bd001418f 390 Gene3D G3DSA:2.40.110.10 126 239 9.9E-46 T 11-10-2018 IX88_08815 df8ac8468050e5d34a55d86bd001418f 390 Gene3D G3DSA:1.20.140.10 240 390 7.5E-45 T 11-10-2018 IX88_08815 df8ac8468050e5d34a55d86bd001418f 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 9.6E-26 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 Gene3D G3DSA:2.40.37.10 10 352 3.6E-138 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 Pfam PF01168 Alanine racemase, N-terminal domain 10 221 3.2E-56 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 SMART SM01005 235 358 3.5E-59 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 Gene3D G3DSA:3.20.20.10 12 219 3.6E-138 T 11-10-2018 IPR029066 PLP-binding barrel IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 TIGRFAM TIGR00492 alr: alanine racemase 4 353 2.2E-99 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 SUPERFAMILY SSF51419 10 236 6.05E-58 T 11-10-2018 IPR029066 PLP-binding barrel IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 Hamap MF_01201 Alanine racemase. 3 358 31.299 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 PRINTS PR00992 Alanine racemase signature 268 283 2.9E-62 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 PRINTS PR00992 Alanine racemase signature 125 137 2.9E-62 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 PRINTS PR00992 Alanine racemase signature 289 306 2.9E-62 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 PRINTS PR00992 Alanine racemase signature 340 353 2.9E-62 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 PRINTS PR00992 Alanine racemase signature 194 221 2.9E-62 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 PRINTS PR00992 Alanine racemase signature 28 44 2.9E-62 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 PRINTS PR00992 Alanine racemase signature 157 168 2.9E-62 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 PRINTS PR00992 Alanine racemase signature 251 266 2.9E-62 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 PRINTS PR00992 Alanine racemase signature 62 80 2.9E-62 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 SUPERFAMILY SSF50621 228 356 9.07E-45 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 IX88_13425 e487fffaeb7ca3fa7179dfba989b97e4 358 Pfam PF00842 Alanine racemase, C-terminal domain 235 355 6.6E-40 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 Pfam PF00391 PEP-utilising enzyme, mobile domain 331 403 7.0E-17 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 SUPERFAMILY SSF55781 4 162 1.2E-33 T 11-10-2018 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 SMART SM00065 21 168 7.9E-23 T 11-10-2018 IPR003018 GAF domain GO:0005515 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 Gene3D G3DSA:1.10.274.10 201 325 9.0E-59 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 Gene3D G3DSA:3.30.450.40 2 168 5.3E-49 T 11-10-2018 IPR029016 GAF-like domain superfamily IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 185 735 3.5E-127 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 SUPERFAMILY SSF51621 432 726 1.39E-98 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 625 643 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 Pfam PF13185 GAF domain 21 158 1.3E-14 T 11-10-2018 IPR003018 GAF domain GO:0005515 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 Gene3D G3DSA:3.50.30.10 184 411 9.0E-59 T 11-10-2018 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 471 490 9.0E-23 T 11-10-2018 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 625 640 9.0E-23 T 11-10-2018 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 642 657 9.0E-23 T 11-10-2018 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 678 690 9.0E-23 T 11-10-2018 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 SUPERFAMILY SSF47831 209 320 1.44E-26 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 SUPERFAMILY SSF52009 304 423 1.11E-26 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 Gene3D G3DSA:3.20.20.60 412 752 1.2E-105 T 11-10-2018 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 Pfam PF05524 PEP-utilising enzyme, N-terminal 183 305 8.7E-22 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 IX88_04345 6dc60568bb1f76ab267453c8f1f65f0a 764 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 431 718 3.1E-96 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 IX88_05310 9ef5c83bcf1595b50b7e9d034499bb08 173 Pfam PF01740 STAS domain 12 102 4.1E-5 T 11-10-2018 IPR002645 STAS domain IX88_05310 9ef5c83bcf1595b50b7e9d034499bb08 173 Gene3D G3DSA:3.30.750.24 4 108 4.8E-12 T 11-10-2018 IPR036513 STAS domain superfamily IX88_05310 9ef5c83bcf1595b50b7e9d034499bb08 173 SUPERFAMILY SSF52091 8 105 5.1E-13 T 11-10-2018 IPR036513 STAS domain superfamily IX88_09425 0303cd8734f0dea08365ca040507f1e3 247 Gene3D G3DSA:3.40.50.300 3 243 7.2E-69 T 11-10-2018 IX88_09425 0303cd8734f0dea08365ca040507f1e3 247 Pfam PF00005 ABC transporter 20 167 1.8E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_09425 0303cd8734f0dea08365ca040507f1e3 247 SMART SM00382 28 215 5.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_09425 0303cd8734f0dea08365ca040507f1e3 247 SUPERFAMILY SSF52540 3 230 6.78E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_09425 0303cd8734f0dea08365ca040507f1e3 247 PIRSF PIRSF039085 1 245 3.9E-100 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 IX88_09425 0303cd8734f0dea08365ca040507f1e3 247 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_03725 fe306f609c027d9f6f88a98a815531d0 972 Pfam PF01443 Viral (Superfamily 1) RNA helicase 655 709 3.0E-5 T 11-10-2018 IPR027351 (+) RNA virus helicase core domain GO:0005524 IX88_03725 fe306f609c027d9f6f88a98a815531d0 972 SUPERFAMILY SSF52540 342 492 1.19E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_03725 fe306f609c027d9f6f88a98a815531d0 972 Gene3D G3DSA:2.30.30.940 583 667 9.1E-48 T 11-10-2018 IX88_03725 fe306f609c027d9f6f88a98a815531d0 972 Gene3D G3DSA:3.40.50.300 501 710 9.1E-48 T 11-10-2018 IX88_03725 fe306f609c027d9f6f88a98a815531d0 972 Gene3D G3DSA:3.40.50.300 337 500 9.1E-48 T 11-10-2018 IX88_03725 fe306f609c027d9f6f88a98a815531d0 972 SUPERFAMILY SSF52540 455 712 2.02E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_03725 fe306f609c027d9f6f88a98a815531d0 972 Pfam PF03389 MobA/MobL family 42 208 3.1E-26 T 11-10-2018 IPR005053 MobA/MobL protein IX88_03725 fe306f609c027d9f6f88a98a815531d0 972 Pfam PF13604 AAA domain 346 538 1.5E-44 T 11-10-2018 IX88_03725 fe306f609c027d9f6f88a98a815531d0 972 Gene3D G3DSA:3.30.930.30 2 188 4.5E-54 T 11-10-2018 IX88_16905 d5930adf23fbaf017ac0adb984d02183 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.8E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_16905 d5930adf23fbaf017ac0adb984d02183 294 SUPERFAMILY SSF46785 1 108 5.13E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_16905 d5930adf23fbaf017ac0adb984d02183 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_16905 d5930adf23fbaf017ac0adb984d02183 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_16905 d5930adf23fbaf017ac0adb984d02183 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_16905 d5930adf23fbaf017ac0adb984d02183 294 Gene3D G3DSA:1.10.10.10 1 90 2.3E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_16905 d5930adf23fbaf017ac0adb984d02183 294 Pfam PF03466 LysR substrate binding domain 88 290 2.5E-39 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_16905 d5930adf23fbaf017ac0adb984d02183 294 SUPERFAMILY SSF53850 90 293 1.93E-36 T 11-10-2018 IX88_16905 d5930adf23fbaf017ac0adb984d02183 294 Gene3D G3DSA:3.40.190.290 91 293 4.2E-43 T 11-10-2018 IX88_04180 3b126eb0c9b0387d6fb4dc8595adb61e 570 Gene3D G3DSA:3.30.9.90 83 470 7.0E-191 T 11-10-2018 IX88_04180 3b126eb0c9b0387d6fb4dc8595adb61e 570 Gene3D G3DSA:3.50.50.60 10 407 7.0E-191 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_04180 3b126eb0c9b0387d6fb4dc8595adb61e 570 SUPERFAMILY SSF54862 470 570 1.24E-29 T 11-10-2018 IX88_04180 3b126eb0c9b0387d6fb4dc8595adb61e 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 1.4E-6 T 11-10-2018 IX88_04180 3b126eb0c9b0387d6fb4dc8595adb61e 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 183 198 1.4E-6 T 11-10-2018 IX88_04180 3b126eb0c9b0387d6fb4dc8595adb61e 570 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 466 567 1.7E-50 T 11-10-2018 IX88_04180 3b126eb0c9b0387d6fb4dc8595adb61e 570 SUPERFAMILY SSF51905 6 437 1.46E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_04180 3b126eb0c9b0387d6fb4dc8595adb61e 570 Pfam PF01946 Thi4 family 8 59 1.8E-6 T 11-10-2018 IX88_04180 3b126eb0c9b0387d6fb4dc8595adb61e 570 Gene3D G3DSA:3.30.70.20 471 565 3.9E-37 T 11-10-2018 IX88_04180 3b126eb0c9b0387d6fb4dc8595adb61e 570 SUPERFAMILY SSF54373 215 311 1.41E-33 T 11-10-2018 IX88_02800 d18cb6cea8c6cf4b1ec099422acb83fd 479 PIRSF PIRSF006060 3 478 6.1E-70 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_02800 d18cb6cea8c6cf4b1ec099422acb83fd 479 Pfam PF00324 Amino acid permease 24 466 8.1E-107 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 IX88_02800 d18cb6cea8c6cf4b1ec099422acb83fd 479 Gene3D G3DSA:1.20.1740.10 14 476 4.7E-64 T 11-10-2018 IX88_02800 d18cb6cea8c6cf4b1ec099422acb83fd 479 ProSitePatterns PS00218 Amino acid permeases signature. 49 79 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 IX88_12105 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 SUPERFAMILY SSF47384 129 196 4.9E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IX88_12105 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 242 361 3.9E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_12105 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 SMART SM00387 241 364 4.7E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_12105 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 SMART SM00388 137 201 7.7E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_12105 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 83 1.7E-6 T 11-10-2018 IPR000014 PAS domain IX88_12105 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 Pfam PF00989 PAS fold 8 97 5.1E-10 T 11-10-2018 IPR013767 PAS fold GO:0006355 IX88_12105 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 343 2.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_12105 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 361 2.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_12105 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 296 310 2.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_12105 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 Gene3D G3DSA:3.30.450.20 9 120 7.8E-16 T 11-10-2018 IX88_12105 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 Pfam PF00512 His Kinase A (phospho-acceptor) domain 139 194 1.3E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_12105 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 SUPERFAMILY SSF55874 203 362 5.89E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_12105 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 SMART SM00091 7 75 2.4E-6 T 11-10-2018 IPR000014 PAS domain IX88_12105 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 Gene3D G3DSA:3.30.565.10 200 362 2.4E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_12105 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 Gene3D G3DSA:1.10.287.130 140 197 9.3E-15 T 11-10-2018 IX88_12105 f3b5967a2aabe77a2d1fba99c1c1d2b6 369 SUPERFAMILY SSF55785 9 100 1.39E-9 T 11-10-2018 IPR035965 PAS domain superfamily IX88_08640 dfb04fc7e05de14c8149bd19a3dcb28e 404 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 4 392 9.7E-210 T 11-10-2018 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 IX88_08640 dfb04fc7e05de14c8149bd19a3dcb28e 404 Gene3D G3DSA:3.30.9.10 76 389 1.6E-164 T 11-10-2018 IX88_08640 dfb04fc7e05de14c8149bd19a3dcb28e 404 Gene3D G3DSA:3.50.50.60 5 353 1.6E-164 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_08640 dfb04fc7e05de14c8149bd19a3dcb28e 404 SUPERFAMILY SSF51905 5 392 2.09E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_08640 dfb04fc7e05de14c8149bd19a3dcb28e 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 1.9E-26 T 11-10-2018 IX88_08640 dfb04fc7e05de14c8149bd19a3dcb28e 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 1.9E-26 T 11-10-2018 IX88_08640 dfb04fc7e05de14c8149bd19a3dcb28e 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.9E-26 T 11-10-2018 IX88_08640 dfb04fc7e05de14c8149bd19a3dcb28e 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 1.9E-26 T 11-10-2018 IX88_08640 dfb04fc7e05de14c8149bd19a3dcb28e 404 SUPERFAMILY SSF54373 177 277 2.67E-45 T 11-10-2018 IX88_08640 dfb04fc7e05de14c8149bd19a3dcb28e 404 Pfam PF01494 FAD binding domain 5 345 5.3E-90 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 IX88_10550 831cb3e086da3cb3979469e2574aeefc 81 Gene3D G3DSA:3.30.70.20 15 76 1.4E-16 T 11-10-2018 IX88_10550 831cb3e086da3cb3979469e2574aeefc 81 Pfam PF13187 4Fe-4S dicluster domain 28 71 3.2E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IX88_10550 831cb3e086da3cb3979469e2574aeefc 81 SUPERFAMILY SSF54862 7 74 3.72E-14 T 11-10-2018 IX88_01370 df7dd1ed1eb4cddc0e881c5c5f28f22e 566 Pfam PF02272 DHHA1 domain 314 443 2.4E-26 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 IX88_01370 df7dd1ed1eb4cddc0e881c5c5f28f22e 566 Gene3D G3DSA:3.90.1640.30 46 318 2.4E-87 T 11-10-2018 IX88_01370 df7dd1ed1eb4cddc0e881c5c5f28f22e 566 Pfam PF01368 DHH family 71 204 5.0E-10 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 IX88_01370 df7dd1ed1eb4cddc0e881c5c5f28f22e 566 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 562 1.4E-152 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 IX88_01370 df7dd1ed1eb4cddc0e881c5c5f28f22e 566 SUPERFAMILY SSF64182 52 449 4.58E-111 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily IX88_01370 df7dd1ed1eb4cddc0e881c5c5f28f22e 566 Gene3D G3DSA:3.10.310.30 319 451 5.1E-33 T 11-10-2018 IX88_16410 1fd73cfeacfe45fcf15f88b773663fb9 402 Pfam PF13356 Arm DNA-binding domain 9 95 1.4E-18 T 11-10-2018 IPR025166 Integrase, DNA-binding domain IX88_16410 1fd73cfeacfe45fcf15f88b773663fb9 402 SUPERFAMILY SSF56349 107 390 2.43E-41 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 IX88_16410 1fd73cfeacfe45fcf15f88b773663fb9 402 Gene3D G3DSA:1.10.443.10 219 391 1.3E-10 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 IX88_16410 1fd73cfeacfe45fcf15f88b773663fb9 402 Pfam PF00589 Phage integrase family 238 367 6.2E-10 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 IX88_16410 1fd73cfeacfe45fcf15f88b773663fb9 402 Gene3D G3DSA:1.10.150.130 98 209 1.6E-19 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal IX88_16410 1fd73cfeacfe45fcf15f88b773663fb9 402 Gene3D G3DSA:3.30.160.390 8 97 4.3E-27 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily IX88_07395 1fd73cfeacfe45fcf15f88b773663fb9 402 Pfam PF13356 Arm DNA-binding domain 9 95 1.4E-18 T 11-10-2018 IPR025166 Integrase, DNA-binding domain IX88_07395 1fd73cfeacfe45fcf15f88b773663fb9 402 SUPERFAMILY SSF56349 107 390 2.43E-41 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 IX88_07395 1fd73cfeacfe45fcf15f88b773663fb9 402 Gene3D G3DSA:1.10.443.10 219 391 1.3E-10 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 IX88_07395 1fd73cfeacfe45fcf15f88b773663fb9 402 Pfam PF00589 Phage integrase family 238 367 6.2E-10 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 IX88_07395 1fd73cfeacfe45fcf15f88b773663fb9 402 Gene3D G3DSA:1.10.150.130 98 209 1.6E-19 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal IX88_07395 1fd73cfeacfe45fcf15f88b773663fb9 402 Gene3D G3DSA:3.30.160.390 8 97 4.3E-27 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily IX88_14465 10170e9de49dce61d300d7f71642449f 259 Gene3D G3DSA:3.40.50.80 100 255 5.1E-38 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_14465 10170e9de49dce61d300d7f71642449f 259 SUPERFAMILY SSF63380 7 99 5.02E-25 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel IX88_14465 10170e9de49dce61d300d7f71642449f 259 Pfam PF00175 Oxidoreductase NAD-binding domain 112 230 4.6E-8 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 IX88_14465 10170e9de49dce61d300d7f71642449f 259 Pfam PF00970 Oxidoreductase FAD-binding domain 15 99 4.2E-10 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 IX88_14465 10170e9de49dce61d300d7f71642449f 259 Gene3D G3DSA:2.40.30.10 1 96 9.1E-29 T 11-10-2018 IX88_14465 10170e9de49dce61d300d7f71642449f 259 SUPERFAMILY SSF52343 102 257 2.88E-37 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_14465 10170e9de49dce61d300d7f71642449f 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 216 224 7.4E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 IX88_14465 10170e9de49dce61d300d7f71642449f 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 7.4E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 IX88_14465 10170e9de49dce61d300d7f71642449f 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 7.4E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 IX88_12220 fd87139f037da76605e37be1903d1638 84 Gene3D G3DSA:3.10.20.30 1 84 3.0E-7 T 11-10-2018 IPR012675 Beta-grasp domain superfamily IX88_12220 fd87139f037da76605e37be1903d1638 84 Pfam PF02597 ThiS family 22 84 3.3E-6 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 IX88_12220 fd87139f037da76605e37be1903d1638 84 SUPERFAMILY SSF54285 7 84 1.59E-8 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp IX88_17420 0bb6f7daac4a6943ba675325cd1aa5b0 547 SUPERFAMILY SSF55124 253 419 4.25E-25 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 IX88_17420 0bb6f7daac4a6943ba675325cd1aa5b0 547 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 109 5.0E-16 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 IX88_17420 0bb6f7daac4a6943ba675325cd1aa5b0 547 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 326 396 1.8E-16 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 IX88_17420 0bb6f7daac4a6943ba675325cd1aa5b0 547 Gene3D G3DSA:3.30.413.10 406 547 1.3E-32 T 11-10-2018 IX88_17420 0bb6f7daac4a6943ba675325cd1aa5b0 547 SUPERFAMILY SSF55124 1 125 2.78E-28 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 IX88_17420 0bb6f7daac4a6943ba675325cd1aa5b0 547 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 274 4.3E-40 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 IX88_17420 0bb6f7daac4a6943ba675325cd1aa5b0 547 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 408 544 4.0E-11 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 IX88_17420 0bb6f7daac4a6943ba675325cd1aa5b0 547 SUPERFAMILY SSF56014 405 546 1.96E-39 T 11-10-2018 IX88_17420 0bb6f7daac4a6943ba675325cd1aa5b0 547 Gene3D G3DSA:3.30.413.10 119 315 1.6E-76 T 11-10-2018 IX88_17420 0bb6f7daac4a6943ba675325cd1aa5b0 547 SUPERFAMILY SSF56014 120 279 1.23E-43 T 11-10-2018 IX88_17420 0bb6f7daac4a6943ba675325cd1aa5b0 547 Gene3D G3DSA:3.90.480.10 53 387 1.6E-76 T 11-10-2018 IX88_17420 0bb6f7daac4a6943ba675325cd1aa5b0 547 PRINTS PR00397 Sirohaem Fe-binding site signature 408 426 5.8E-5 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 IX88_17420 0bb6f7daac4a6943ba675325cd1aa5b0 547 PRINTS PR00397 Sirohaem Fe-binding site signature 454 472 5.8E-5 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 IX88_08720 fc04ec4ef2dd2c901f71a8c42dff1732 401 Gene3D G3DSA:3.40.47.10 140 397 7.2E-149 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_08720 fc04ec4ef2dd2c901f71a8c42dff1732 401 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 IX88_08720 fc04ec4ef2dd2c901f71a8c42dff1732 401 PIRSF PIRSF000429 1 401 2.2E-130 T 11-10-2018 IPR002155 Thiolase GO:0016747 IX88_08720 fc04ec4ef2dd2c901f71a8c42dff1732 401 Pfam PF00108 Thiolase, N-terminal domain 5 267 4.9E-71 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 IX88_08720 fc04ec4ef2dd2c901f71a8c42dff1732 401 SUPERFAMILY SSF53901 276 399 1.28E-42 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_08720 fc04ec4ef2dd2c901f71a8c42dff1732 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 IX88_08720 fc04ec4ef2dd2c901f71a8c42dff1732 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 6.8E-137 T 11-10-2018 IPR002155 Thiolase GO:0016747 IX88_08720 fc04ec4ef2dd2c901f71a8c42dff1732 401 Gene3D G3DSA:3.40.47.10 6 281 7.2E-149 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_08720 fc04ec4ef2dd2c901f71a8c42dff1732 401 Pfam PF02803 Thiolase, C-terminal domain 275 398 1.1E-45 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 IX88_08720 fc04ec4ef2dd2c901f71a8c42dff1732 401 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 IX88_08720 fc04ec4ef2dd2c901f71a8c42dff1732 401 SUPERFAMILY SSF53901 3 275 1.25E-72 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 SUPERFAMILY SSF56719 407 817 2.46E-87 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 46 188 9.1E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 752 812 2.5E-30 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 Pfam PF00204 DNA gyrase B 234 403 7.3E-62 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 Gene3D G3DSA:3.40.50.670 716 821 1.3E-26 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 Pfam PF01751 Toprim domain 432 544 1.2E-17 T 11-10-2018 IPR006171 TOPRIM domain IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 SMART SM00433 49 816 1.1E-269 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 Gene3D G3DSA:3.10.20.690 610 702 4.3E-7 T 11-10-2018 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 SUPERFAMILY SSF54211 234 405 6.45E-60 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 SUPERFAMILY SSF55874 19 231 2.1E-75 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 ProSitePatterns PS00177 DNA topoisomerase II signature. 435 443 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR01159 DNA gyrase subunit B signature 194 209 2.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR01159 DNA gyrase subunit B signature 776 788 2.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR01159 DNA gyrase subunit B signature 325 341 2.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR01159 DNA gyrase subunit B signature 19 29 2.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR01159 DNA gyrase subunit B signature 483 492 2.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR01159 DNA gyrase subunit B signature 792 808 2.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR01159 DNA gyrase subunit B signature 209 222 2.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR01159 DNA gyrase subunit B signature 255 273 2.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR01159 DNA gyrase subunit B signature 387 407 2.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR01159 DNA gyrase subunit B signature 373 387 2.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR00418 DNA topoisomerase II family signature 518 535 1.8E-71 T 11-10-2018 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR00418 DNA topoisomerase II family signature 433 447 1.8E-71 T 11-10-2018 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR00418 DNA topoisomerase II family signature 500 516 1.8E-71 T 11-10-2018 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR00418 DNA topoisomerase II family signature 755 771 1.8E-71 T 11-10-2018 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR00418 DNA topoisomerase II family signature 49 64 1.8E-71 T 11-10-2018 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR00418 DNA topoisomerase II family signature 84 97 1.8E-71 T 11-10-2018 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR00418 DNA topoisomerase II family signature 281 294 1.8E-71 T 11-10-2018 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR00418 DNA topoisomerase II family signature 538 550 1.8E-71 T 11-10-2018 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 PRINTS PR00418 DNA topoisomerase II family signature 127 141 1.8E-71 T 11-10-2018 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 Gene3D G3DSA:3.30.230.10 233 408 1.1E-72 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 16 822 101.401 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 19 818 1.7E-302 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 Gene3D G3DSA:3.30.565.10 15 232 3.9E-92 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 SMART SM00387 45 189 4.0E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_02185 c0bffe359b23a875ec675a5bd1e320d2 822 Gene3D G3DSA:3.40.50.670 409 609 1.6E-72 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IX88_00580 33b2a32375c34894eae265218551dce7 83 SUPERFAMILY SSF54565 1 75 5.36E-29 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00580 33b2a32375c34894eae265218551dce7 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.603 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00580 33b2a32375c34894eae265218551dce7 83 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 11-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00580 33b2a32375c34894eae265218551dce7 83 Gene3D G3DSA:3.30.1320.10 1 82 6.2E-32 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00580 33b2a32375c34894eae265218551dce7 83 Pfam PF00886 Ribosomal protein S16 8 68 6.3E-26 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00580 33b2a32375c34894eae265218551dce7 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.2E-29 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_07095 8d7d7326bc1cd4f777e9a9d11cd7269b 160 SMART SM00988 2 66 1.5E-13 T 11-10-2018 IPR004029 UreE urease accessory, N-terminal IX88_07095 8d7d7326bc1cd4f777e9a9d11cd7269b 160 Pfam PF02814 UreE urease accessory protein, N-terminal domain 6 63 1.5E-11 T 11-10-2018 IPR004029 UreE urease accessory, N-terminal IX88_07095 8d7d7326bc1cd4f777e9a9d11cd7269b 160 SUPERFAMILY SSF69287 1 72 2.75E-14 T 11-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily IX88_07095 8d7d7326bc1cd4f777e9a9d11cd7269b 160 Gene3D G3DSA:2.60.260.20 1 71 6.2E-16 T 11-10-2018 IX88_07095 8d7d7326bc1cd4f777e9a9d11cd7269b 160 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 140 22.004 T 11-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 IX88_07095 8d7d7326bc1cd4f777e9a9d11cd7269b 160 SUPERFAMILY SSF69737 72 139 2.62E-20 T 11-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 IX88_07095 8d7d7326bc1cd4f777e9a9d11cd7269b 160 Pfam PF05194 UreE urease accessory protein, C-terminal domain 73 159 5.0E-27 T 11-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 IX88_07095 8d7d7326bc1cd4f777e9a9d11cd7269b 160 Gene3D G3DSA:3.30.70.790 73 144 1.3E-27 T 11-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 IX88_07095 8d7d7326bc1cd4f777e9a9d11cd7269b 160 PIRSF PIRSF036402 2 159 8.1E-40 T 11-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 IX88_02040 832d5a68e65dc742f4304b48e473ac8c 207 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 154 205 6.8E-5 T 11-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type IX88_02040 832d5a68e65dc742f4304b48e473ac8c 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 62 2.5E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_02040 832d5a68e65dc742f4304b48e473ac8c 207 Gene3D G3DSA:1.10.10.60 7 63 2.8E-19 T 11-10-2018 IX88_02040 832d5a68e65dc742f4304b48e473ac8c 207 SUPERFAMILY SSF46689 9 85 2.49E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_02040 832d5a68e65dc742f4304b48e473ac8c 207 SUPERFAMILY SSF48498 102 202 4.85E-5 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_02040 832d5a68e65dc742f4304b48e473ac8c 207 Gene3D G3DSA:1.10.357.10 68 207 2.5E-20 T 11-10-2018 IX88_02040 832d5a68e65dc742f4304b48e473ac8c 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 6.0E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_02040 832d5a68e65dc742f4304b48e473ac8c 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 6.0E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_11270 f61ce0d2d0df07a7463a17f93de14ace 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.4E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_11270 f61ce0d2d0df07a7463a17f93de14ace 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.4E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_11270 f61ce0d2d0df07a7463a17f93de14ace 188 SUPERFAMILY SSF46689 5 74 1.44E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_11270 f61ce0d2d0df07a7463a17f93de14ace 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 1.1E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_11270 f61ce0d2d0df07a7463a17f93de14ace 188 Gene3D G3DSA:1.10.357.10 2 182 1.5E-19 T 11-10-2018 IX88_03985 0a9d122fe2915536409d8912f01b5078 899 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 897 16.87 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 IX88_03985 0a9d122fe2915536409d8912f01b5078 899 Pfam PF11987 Translation-initiation factor 2 684 789 5.5E-35 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 IX88_03985 0a9d122fe2915536409d8912f01b5078 899 Pfam PF00009 Elongation factor Tu GTP binding domain 404 559 6.8E-35 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_03985 0a9d122fe2915536409d8912f01b5078 899 Gene3D G3DSA:3.40.50.300 397 570 6.1E-72 T 11-10-2018 IX88_03985 0a9d122fe2915536409d8912f01b5078 899 SUPERFAMILY SSF50447 572 655 2.37E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IX88_03985 0a9d122fe2915536409d8912f01b5078 899 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 401 558 7.1E-33 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IX88_03985 0a9d122fe2915536409d8912f01b5078 899 Gene3D G3DSA:3.30.56.50 2 51 1.1E-6 T 11-10-2018 IX88_03985 0a9d122fe2915536409d8912f01b5078 899 Gene3D G3DSA:2.40.30.10 801 898 2.8E-29 T 11-10-2018 IX88_03985 0a9d122fe2915536409d8912f01b5078 899 SUPERFAMILY SSF52156 677 806 2.09E-34 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily IX88_03985 0a9d122fe2915536409d8912f01b5078 899 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 98 5.6E-11 T 11-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial IX88_03985 0a9d122fe2915536409d8912f01b5078 899 SUPERFAMILY SSF50447 801 897 1.43E-28 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IX88_03985 0a9d122fe2915536409d8912f01b5078 899 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 318 899 1.4E-249 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 IX88_03985 0a9d122fe2915536409d8912f01b5078 899 SUPERFAMILY SSF52540 394 566 1.84E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_03985 0a9d122fe2915536409d8912f01b5078 899 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 325 372 1.9E-13 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal IX88_03985 0a9d122fe2915536409d8912f01b5078 899 Gene3D G3DSA:2.40.30.10 571 688 7.1E-40 T 11-10-2018 IX88_03985 0a9d122fe2915536409d8912f01b5078 899 SUPERFAMILY SSF46955 3 51 2.75E-8 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily IX88_03985 0a9d122fe2915536409d8912f01b5078 899 Gene3D G3DSA:3.40.50.10050 693 800 1.0E-35 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily IX88_03985 0a9d122fe2915536409d8912f01b5078 899 ProSitePatterns PS01176 Initiation factor 2 signature. 850 872 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 IX88_11285 a380e6c7930b6b84fef11f92963caa9e 612 Gene3D G3DSA:3.40.50.720 405 565 3.6E-32 T 11-10-2018 IX88_11285 a380e6c7930b6b84fef11f92963caa9e 612 Pfam PF02254 TrkA-N domain 408 521 4.3E-18 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 IX88_11285 a380e6c7930b6b84fef11f92963caa9e 612 Gene3D G3DSA:1.20.1530.20 7 391 2.2E-79 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily IX88_11285 a380e6c7930b6b84fef11f92963caa9e 612 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 17 289 1.1E-77 T 11-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 IX88_11285 a380e6c7930b6b84fef11f92963caa9e 612 Pfam PF00999 Sodium/hydrogen exchanger family 15 377 3.4E-67 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 IX88_11285 a380e6c7930b6b84fef11f92963caa9e 612 SUPERFAMILY SSF51735 406 535 3.78E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_02835 828b97d33ef061daa770fe38c0cbce4f 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 257 1.9E-86 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 IX88_02835 828b97d33ef061daa770fe38c0cbce4f 257 Gene3D G3DSA:1.10.12.10 200 256 1.1E-25 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal IX88_02835 828b97d33ef061daa770fe38c0cbce4f 257 Gene3D G3DSA:3.90.226.10 2 199 1.3E-75 T 11-10-2018 IX88_02835 828b97d33ef061daa770fe38c0cbce4f 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 IX88_02835 828b97d33ef061daa770fe38c0cbce4f 257 SUPERFAMILY SSF52096 1 256 1.57E-89 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_13380 8085e71fe3c3b01d131c97ee183addd7 350 SUPERFAMILY SSF81464 14 115 3.43E-22 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13380 8085e71fe3c3b01d131c97ee183addd7 350 Gene3D G3DSA:1.10.287.90 26 110 2.0E-30 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13380 8085e71fe3c3b01d131c97ee183addd7 350 PIRSF PIRSF000292 1 349 8.7E-128 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 IX88_13380 8085e71fe3c3b01d131c97ee183addd7 350 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 144 222 1.0E-5 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13380 8085e71fe3c3b01d131c97ee183addd7 350 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 12 236 7.4E-101 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 IX88_13380 8085e71fe3c3b01d131c97ee183addd7 350 Gene3D G3DSA:2.60.40.420 111 279 6.1E-48 T 11-10-2018 IPR008972 Cupredoxin IX88_13380 8085e71fe3c3b01d131c97ee183addd7 350 Pfam PF06481 COX Aromatic Rich Motif 297 323 5.7E-9 T 11-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 IX88_13380 8085e71fe3c3b01d131c97ee183addd7 350 SUPERFAMILY SSF49503 117 254 4.06E-44 T 11-10-2018 IPR008972 Cupredoxin IX88_10280 8d369d61f2d4b5932cd51a31f846f572 340 Gene3D G3DSA:1.10.287.470 181 211 4.4E-19 T 11-10-2018 IX88_10280 8d369d61f2d4b5932cd51a31f846f572 340 Gene3D G3DSA:2.40.50.100 212 246 4.4E-19 T 11-10-2018 IX88_10280 8d369d61f2d4b5932cd51a31f846f572 340 Gene3D G3DSA:1.10.287.470 79 99 2.1E-12 T 11-10-2018 IX88_10280 8d369d61f2d4b5932cd51a31f846f572 340 SUPERFAMILY SSF111369 115 175 5.49E-5 T 11-10-2018 IX88_10280 8d369d61f2d4b5932cd51a31f846f572 340 SUPERFAMILY SSF111369 182 331 6.15E-8 T 11-10-2018 IX88_10280 8d369d61f2d4b5932cd51a31f846f572 340 Gene3D G3DSA:2.40.50.100 45 78 2.1E-12 T 11-10-2018 IX88_10280 8d369d61f2d4b5932cd51a31f846f572 340 Gene3D G3DSA:2.40.30.170 247 333 4.4E-19 T 11-10-2018 IX88_10280 8d369d61f2d4b5932cd51a31f846f572 340 SUPERFAMILY SSF111369 44 117 7.59E-7 T 11-10-2018 IX88_10280 8d369d61f2d4b5932cd51a31f846f572 340 Pfam PF13533 Biotin-lipoyl like 46 94 3.1E-13 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain IX88_10280 8d369d61f2d4b5932cd51a31f846f572 340 Gene3D G3DSA:1.10.287.470 110 176 1.3E-10 T 11-10-2018 IX88_10280 8d369d61f2d4b5932cd51a31f846f572 340 Pfam PF13437 HlyD family secretion protein 212 322 1.9E-13 T 11-10-2018 IX88_09565 41275e1c92815622daa8a0c365601755 486 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 10 201 1.9E-33 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 IX88_09565 41275e1c92815622daa8a0c365601755 486 Pfam PF01256 Carbohydrate kinase 238 481 7.0E-48 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 IX88_09565 41275e1c92815622daa8a0c365601755 486 Pfam PF03853 YjeF-related protein N-terminus 27 185 3.4E-33 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 IX88_09565 41275e1c92815622daa8a0c365601755 486 PIRSF PIRSF017184 3 486 1.2E-103 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 IX88_09565 41275e1c92815622daa8a0c365601755 486 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 222 486 3.5E-57 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 IX88_09565 41275e1c92815622daa8a0c365601755 486 SUPERFAMILY SSF53613 220 485 5.45E-60 T 11-10-2018 IPR029056 Ribokinase-like IX88_09565 41275e1c92815622daa8a0c365601755 486 Gene3D G3DSA:3.40.50.10260 2 210 9.4E-49 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 IX88_09565 41275e1c92815622daa8a0c365601755 486 Gene3D G3DSA:3.40.1190.20 220 486 2.1E-70 T 11-10-2018 IPR029056 Ribokinase-like IX88_09565 41275e1c92815622daa8a0c365601755 486 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 215 485 19.185 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 IX88_09565 41275e1c92815622daa8a0c365601755 486 SUPERFAMILY SSF64153 5 237 1.15E-50 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 IX88_09565 41275e1c92815622daa8a0c365601755 486 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 426 436 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site IX88_17615 226b0dd1f18c3a9a0f8e5c54dfc79a25 160 Pfam PF06146 Phosphate-starvation-inducible E 54 122 3.7E-17 T 11-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like IX88_17615 226b0dd1f18c3a9a0f8e5c54dfc79a25 160 PIRSF PIRSF029598 2 140 7.0E-34 T 11-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 IX88_11215 f4903fde0d0642317989c764cba17807 447 Gene3D G3DSA:1.20.1250.20 3 206 5.0E-25 T 11-10-2018 IX88_11215 f4903fde0d0642317989c764cba17807 447 Gene3D G3DSA:1.20.1250.20 236 441 1.5E-31 T 11-10-2018 IX88_11215 f4903fde0d0642317989c764cba17807 447 SUPERFAMILY SSF103473 4 437 3.14E-70 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_11215 f4903fde0d0642317989c764cba17807 447 Pfam PF07690 Major Facilitator Superfamily 19 387 1.8E-40 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_14295 8e3221e343ee8e57fa32bb9777cc2384 357 Gene3D G3DSA:1.10.1040.10 205 351 9.4E-45 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 IX88_14295 8e3221e343ee8e57fa32bb9777cc2384 357 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 204 225 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IX88_14295 8e3221e343ee8e57fa32bb9777cc2384 357 Gene3D G3DSA:3.40.50.720 11 203 1.0E-61 T 11-10-2018 IX88_14295 8e3221e343ee8e57fa32bb9777cc2384 357 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 196 334 5.5E-46 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IX88_14295 8e3221e343ee8e57fa32bb9777cc2384 357 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 23 173 7.1E-50 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IX88_14295 8e3221e343ee8e57fa32bb9777cc2384 357 PIRSF PIRSF000114 15 348 3.4E-104 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IX88_14295 8e3221e343ee8e57fa32bb9777cc2384 357 SUPERFAMILY SSF48179 195 347 8.84E-50 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_14295 8e3221e343ee8e57fa32bb9777cc2384 357 SUPERFAMILY SSF51735 22 192 6.69E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_14295 8e3221e343ee8e57fa32bb9777cc2384 357 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 21 338 33.69 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IX88_14295 8e3221e343ee8e57fa32bb9777cc2384 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 254 271 3.1E-38 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IX88_14295 8e3221e343ee8e57fa32bb9777cc2384 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 214 238 3.1E-38 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IX88_14295 8e3221e343ee8e57fa32bb9777cc2384 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 25 42 3.1E-38 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IX88_14295 8e3221e343ee8e57fa32bb9777cc2384 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 149 169 3.1E-38 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IX88_14295 8e3221e343ee8e57fa32bb9777cc2384 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 75 102 3.1E-38 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IX88_14295 8e3221e343ee8e57fa32bb9777cc2384 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 189 213 3.1E-38 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 IX88_05110 4a719c87cf7a79675a6d0b42ddf4884f 268 SUPERFAMILY SSF101386 1 96 3.6E-23 T 11-10-2018 IX88_05110 4a719c87cf7a79675a6d0b42ddf4884f 268 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 21 94 3.2E-24 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core IX88_05110 4a719c87cf7a79675a6d0b42ddf4884f 268 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 159 218 1.6E-7 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core IX88_05110 4a719c87cf7a79675a6d0b42ddf4884f 268 Gene3D G3DSA:1.10.287.1080 1 120 3.0E-42 T 11-10-2018 IX88_05110 4a719c87cf7a79675a6d0b42ddf4884f 268 Gene3D G3DSA:1.10.287.1080 125 252 2.3E-37 T 11-10-2018 IX88_05110 4a719c87cf7a79675a6d0b42ddf4884f 268 SUPERFAMILY SSF101386 140 224 1.18E-18 T 11-10-2018 IX88_05110 4a719c87cf7a79675a6d0b42ddf4884f 268 TIGRFAM TIGR00444 mazG: MazG family protein 7 249 6.8E-79 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG IX88_08140 45f00dbfc646109c6a4501b2fb72ebea 166 Gene3D G3DSA:3.10.450.50 4 166 1.8E-48 T 11-10-2018 IX88_08140 45f00dbfc646109c6a4501b2fb72ebea 166 SUPERFAMILY SSF54427 6 166 2.05E-55 T 11-10-2018 IPR032710 NTF2-like domain superfamily IX88_08140 45f00dbfc646109c6a4501b2fb72ebea 166 TIGRFAM TIGR03232 benzo_1_2_benB: benzoate 1,2-dioxygenase, small subunit 12 166 1.9E-92 T 11-10-2018 IPR017641 Benzoate 1,2-dioxygenase, small subunit GO:0055114 IX88_08140 45f00dbfc646109c6a4501b2fb72ebea 166 Pfam PF00866 Ring hydroxylating beta subunit 18 158 4.6E-49 T 11-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 IX88_08170 fde88ede4078a4fcf8de6243518cbd7c 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 113 2.5E-19 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 IX88_08170 fde88ede4078a4fcf8de6243518cbd7c 135 Gene3D G3DSA:3.90.1590.10 1 118 2.1E-23 T 11-10-2018 IX88_08170 fde88ede4078a4fcf8de6243518cbd7c 135 SUPERFAMILY SSF51316 1 132 6.28E-41 T 11-10-2018 IPR011057 Mss4-like superfamily IX88_09355 0a7106ad33d8b4901d6b37abe8f4d0b6 230 Gene3D G3DSA:1.10.10.10 147 227 2.0E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_09355 0a7106ad33d8b4901d6b37abe8f4d0b6 230 SMART SM00419 168 218 2.5E-5 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 IX88_09355 0a7106ad33d8b4901d6b37abe8f4d0b6 230 SMART SM00100 14 135 2.3E-5 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain IX88_09355 0a7106ad33d8b4901d6b37abe8f4d0b6 230 Gene3D G3DSA:2.60.120.10 5 144 1.5E-25 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_09355 0a7106ad33d8b4901d6b37abe8f4d0b6 230 Pfam PF13545 Crp-like helix-turn-helix domain 152 223 2.2E-14 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 IX88_09355 0a7106ad33d8b4901d6b37abe8f4d0b6 230 Pfam PF00027 Cyclic nucleotide-binding domain 33 120 7.6E-17 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain IX88_09355 0a7106ad33d8b4901d6b37abe8f4d0b6 230 SUPERFAMILY SSF46785 150 226 1.72E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_09355 0a7106ad33d8b4901d6b37abe8f4d0b6 230 SUPERFAMILY SSF51206 8 138 4.71E-31 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like IX88_13590 4e06e66b7471381385c0eb44bfbf752f 399 Pfam PF02353 Mycolic acid cyclopropane synthetase 125 388 2.4E-81 T 11-10-2018 IX88_13590 4e06e66b7471381385c0eb44bfbf752f 399 Gene3D G3DSA:3.40.50.150 129 398 3.9E-98 T 11-10-2018 IX88_13590 4e06e66b7471381385c0eb44bfbf752f 399 PIRSF PIRSF003085 10 398 6.3E-118 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 IX88_13590 4e06e66b7471381385c0eb44bfbf752f 399 SUPERFAMILY SSF53335 16 350 3.66E-76 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_16305 a0a20f87afe0c1037116c026d3c749ac 1332 SUPERFAMILY SSF51161 1214 1328 6.24E-15 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily IX88_16305 a0a20f87afe0c1037116c026d3c749ac 1332 Pfam PF00501 AMP-binding enzyme 30 418 1.0E-89 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IX88_16305 a0a20f87afe0c1037116c026d3c749ac 1332 Gene3D G3DSA:2.160.10.10 974 1101 1.7E-10 T 11-10-2018 IX88_16305 a0a20f87afe0c1037116c026d3c749ac 1332 SUPERFAMILY SSF56801 24 539 1.44E-140 T 11-10-2018 IX88_16305 a0a20f87afe0c1037116c026d3c749ac 1332 ProSitePatterns PS00455 Putative AMP-binding domain signature. 169 180 - T 11-10-2018 IPR020845 AMP-binding, conserved site IX88_16305 a0a20f87afe0c1037116c026d3c749ac 1332 Gene3D G3DSA:1.10.1200.10 516 601 7.7E-10 T 11-10-2018 IPR036736 ACP-like superfamily IX88_16305 a0a20f87afe0c1037116c026d3c749ac 1332 Gene3D G3DSA:2.160.10.10 1227 1331 1.3E-10 T 11-10-2018 IX88_16305 a0a20f87afe0c1037116c026d3c749ac 1332 TIGRFAM TIGR02353 NRPS_term_dom: non-ribosomal peptide synthetase terminal domain of unknown function 627 1326 4.6E-218 T 11-10-2018 IPR012728 Non-ribosomal peptide synthetase, C-terminal IX88_16305 a0a20f87afe0c1037116c026d3c749ac 1332 Pfam PF13193 AMP-binding enzyme C-terminal domain 426 502 8.2E-9 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IX88_16305 a0a20f87afe0c1037116c026d3c749ac 1332 Gene3D G3DSA:3.30.300.30 412 515 5.2E-29 T 11-10-2018 IX88_16305 a0a20f87afe0c1037116c026d3c749ac 1332 Gene3D G3DSA:3.40.50.12780 17 411 4.8E-111 T 11-10-2018 IX88_16305 a0a20f87afe0c1037116c026d3c749ac 1332 SUPERFAMILY SSF47336 524 597 6.41E-7 T 11-10-2018 IPR036736 ACP-like superfamily IX88_16305 a0a20f87afe0c1037116c026d3c749ac 1332 SUPERFAMILY SSF51161 729 847 6.24E-15 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily IX88_16305 a0a20f87afe0c1037116c026d3c749ac 1332 SUPERFAMILY SSF51161 976 1092 4.16E-18 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily IX88_16305 a0a20f87afe0c1037116c026d3c749ac 1332 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 51 442 7.2E-116 T 11-10-2018 IPR010071 Amino acid adenylation domain IX88_16305 a0a20f87afe0c1037116c026d3c749ac 1332 Gene3D G3DSA:2.160.10.10 727 856 9.1E-13 T 11-10-2018 IX88_10540 e282008ba4005120c3f57f4adae8b19f 247 SMART SM00345 18 77 1.7E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_10540 e282008ba4005120c3f57f4adae8b19f 247 SUPERFAMILY SSF46785 7 81 3.02E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_10540 e282008ba4005120c3f57f4adae8b19f 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 3.7E-19 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_10540 e282008ba4005120c3f57f4adae8b19f 247 SMART SM00866 98 240 2.2E-33 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 IX88_10540 e282008ba4005120c3f57f4adae8b19f 247 Gene3D G3DSA:1.10.10.10 13 80 3.0E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_10540 e282008ba4005120c3f57f4adae8b19f 247 Pfam PF07702 UTRA domain 99 240 2.1E-35 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 IX88_10540 e282008ba4005120c3f57f4adae8b19f 247 SUPERFAMILY SSF64288 65 246 8.79E-46 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IX88_10540 e282008ba4005120c3f57f4adae8b19f 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 3.6E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_10540 e282008ba4005120c3f57f4adae8b19f 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 3.6E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_10540 e282008ba4005120c3f57f4adae8b19f 247 Gene3D G3DSA:3.40.1410.10 81 247 1.8E-42 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IX88_00625 f967cf2a7779f5cea4c8fb591fc17edd 209 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 IX88_00625 f967cf2a7779f5cea4c8fb591fc17edd 209 SUPERFAMILY SSF52540 2 183 1.34E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_00625 f967cf2a7779f5cea4c8fb591fc17edd 209 SMART SM00072 2 184 3.5E-63 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit IX88_00625 f967cf2a7779f5cea4c8fb591fc17edd 209 Gene3D G3DSA:3.40.50.300 7 180 5.7E-66 T 11-10-2018 IX88_00625 f967cf2a7779f5cea4c8fb591fc17edd 209 Gene3D G3DSA:3.30.63.10 34 93 5.7E-66 T 11-10-2018 IX88_00625 f967cf2a7779f5cea4c8fb591fc17edd 209 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 35.584 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 IX88_00625 f967cf2a7779f5cea4c8fb591fc17edd 209 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 1.0E-73 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 IX88_00625 f967cf2a7779f5cea4c8fb591fc17edd 209 Pfam PF00625 Guanylate kinase 6 182 3.4E-52 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit IX88_15335 5bd00ef091adfeaaa9a4320ed1091e46 133 SUPERFAMILY SSF54593 1 126 4.16E-37 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IX88_15335 5bd00ef091adfeaaa9a4320ed1091e46 133 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 IX88_15335 5bd00ef091adfeaaa9a4320ed1091e46 133 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 130 6.6E-67 T 11-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 IX88_15335 5bd00ef091adfeaaa9a4320ed1091e46 133 Gene3D G3DSA:3.10.180.10 1 132 5.3E-51 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IX88_15335 5bd00ef091adfeaaa9a4320ed1091e46 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 4.5E-24 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IX88_15335 5bd00ef091adfeaaa9a4320ed1091e46 133 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 IX88_06965 68b0b8102d481ff6cd11bb85c36d4fbe 692 Hamap MF_00347 Polyphosphate kinase [ppk]. 16 682 27.798 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 IX88_06965 68b0b8102d481ff6cd11bb85c36d4fbe 692 SUPERFAMILY SSF143724 122 323 7.06E-65 T 11-10-2018 IX88_06965 68b0b8102d481ff6cd11bb85c36d4fbe 692 Pfam PF13089 Polyphosphate kinase N-terminal domain 19 124 2.3E-34 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 IX88_06965 68b0b8102d481ff6cd11bb85c36d4fbe 692 SUPERFAMILY SSF56024 510 690 1.61E-71 T 11-10-2018 IX88_06965 68b0b8102d481ff6cd11bb85c36d4fbe 692 SUPERFAMILY SSF140356 16 120 2.88E-36 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 IX88_06965 68b0b8102d481ff6cd11bb85c36d4fbe 692 PIRSF PIRSF015589 2 692 1.0E-279 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 IX88_06965 68b0b8102d481ff6cd11bb85c36d4fbe 692 Gene3D G3DSA:3.30.870.10 326 509 8.3E-71 T 11-10-2018 IX88_06965 68b0b8102d481ff6cd11bb85c36d4fbe 692 Pfam PF13090 Polyphosphate kinase C-terminal domain 340 688 6.3E-154 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 IX88_06965 68b0b8102d481ff6cd11bb85c36d4fbe 692 Gene3D G3DSA:3.30.870.10 510 692 8.7E-68 T 11-10-2018 IX88_06965 68b0b8102d481ff6cd11bb85c36d4fbe 692 Pfam PF02503 Polyphosphate kinase middle domain 134 331 7.1E-62 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 IX88_06965 68b0b8102d481ff6cd11bb85c36d4fbe 692 Gene3D G3DSA:3.30.1840.10 12 323 1.2E-103 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 IX88_06965 68b0b8102d481ff6cd11bb85c36d4fbe 692 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 18 689 2.6E-288 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 IX88_06965 68b0b8102d481ff6cd11bb85c36d4fbe 692 SUPERFAMILY SSF56024 326 502 1.06E-56 T 11-10-2018 IX88_13240 9152fe8bde639801c973819e623883b0 677 Pfam PF00702 haloacid dehalogenase-like hydrolase 299 525 1.4E-37 T 11-10-2018 IX88_13240 9152fe8bde639801c973819e623883b0 677 Gene3D G3DSA:2.70.150.20 102 209 6.1E-25 T 11-10-2018 IX88_13240 9152fe8bde639801c973819e623883b0 677 Gene3D G3DSA:3.40.1110.10 317 441 1.9E-42 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 IX88_13240 9152fe8bde639801c973819e623883b0 677 SUPERFAMILY SSF81665 33 661 1.83E-9 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 IX88_13240 9152fe8bde639801c973819e623883b0 677 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 21 671 2.1E-290 T 11-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 IX88_13240 9152fe8bde639801c973819e623883b0 677 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 546 5.5E-23 T 11-10-2018 IX88_13240 9152fe8bde639801c973819e623883b0 677 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 303 317 5.5E-23 T 11-10-2018 IX88_13240 9152fe8bde639801c973819e623883b0 677 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 152 166 5.5E-23 T 11-10-2018 IX88_13240 9152fe8bde639801c973819e623883b0 677 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 458 468 5.5E-23 T 11-10-2018 IX88_13240 9152fe8bde639801c973819e623883b0 677 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 511 530 5.5E-23 T 11-10-2018 IX88_13240 9152fe8bde639801c973819e623883b0 677 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 73 339 2.8E-31 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 IX88_13240 9152fe8bde639801c973819e623883b0 677 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 352 598 4.4E-46 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 IX88_13240 9152fe8bde639801c973819e623883b0 677 SUPERFAMILY SSF81653 110 205 5.1E-20 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 IX88_13240 9152fe8bde639801c973819e623883b0 677 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 305 311 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 IX88_13240 9152fe8bde639801c973819e623883b0 677 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 12 675 38.453 T 11-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 IX88_13240 9152fe8bde639801c973819e623883b0 677 Pfam PF00122 E1-E2 ATPase 104 282 1.8E-31 T 11-10-2018 IX88_13240 9152fe8bde639801c973819e623883b0 677 SUPERFAMILY SSF56784 291 554 2.06E-41 T 11-10-2018 IPR036412 HAD-like superfamily IX88_00070 0e86c0aaa49f0b327a38dec1caf24227 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 146 18.194 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 IX88_00070 0e86c0aaa49f0b327a38dec1caf24227 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 145 1.4E-26 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P IX88_00070 0e86c0aaa49f0b327a38dec1caf24227 146 Gene3D G3DSA:3.100.10.10 73 146 3.5E-13 T 11-10-2018 IX88_00070 0e86c0aaa49f0b327a38dec1caf24227 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 111 141 - T 11-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00070 0e86c0aaa49f0b327a38dec1caf24227 146 SUPERFAMILY SSF52080 6 145 3.66E-41 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily IX88_00070 0e86c0aaa49f0b327a38dec1caf24227 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 145 9.3E-45 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_18285 0e86c0aaa49f0b327a38dec1caf24227 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 146 18.194 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 IX88_18285 0e86c0aaa49f0b327a38dec1caf24227 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 145 1.4E-26 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P IX88_18285 0e86c0aaa49f0b327a38dec1caf24227 146 Gene3D G3DSA:3.100.10.10 73 146 3.5E-13 T 11-10-2018 IX88_18285 0e86c0aaa49f0b327a38dec1caf24227 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 111 141 - T 11-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_18285 0e86c0aaa49f0b327a38dec1caf24227 146 SUPERFAMILY SSF52080 6 145 3.66E-41 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily IX88_18285 0e86c0aaa49f0b327a38dec1caf24227 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 145 9.3E-45 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_09720 6d74435057ea20edfd9af189ecb8bd0b 387 SMART SM00558 81 228 1.2E-5 T 11-10-2018 IPR003347 JmjC domain IX88_09720 6d74435057ea20edfd9af189ecb8bd0b 387 Pfam PF08007 Cupin superfamily protein 14 312 1.8E-86 T 11-10-2018 IPR003347 JmjC domain IX88_09720 6d74435057ea20edfd9af189ecb8bd0b 387 Gene3D G3DSA:1.10.10.2510 216 386 5.8E-14 T 11-10-2018 IX88_09720 6d74435057ea20edfd9af189ecb8bd0b 387 Gene3D G3DSA:2.60.120.650 1 213 1.3E-73 T 11-10-2018 IX88_09720 6d74435057ea20edfd9af189ecb8bd0b 387 SUPERFAMILY SSF51197 7 296 4.26E-63 T 11-10-2018 IX88_10755 4e248d1ac7335940ae25365c9719ea05 691 Hamap MF_00347 Polyphosphate kinase [ppk]. 15 685 27.302 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 IX88_10755 4e248d1ac7335940ae25365c9719ea05 691 SUPERFAMILY SSF140356 16 117 1.7E-31 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 IX88_10755 4e248d1ac7335940ae25365c9719ea05 691 Pfam PF13089 Polyphosphate kinase N-terminal domain 18 123 6.6E-32 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 IX88_10755 4e248d1ac7335940ae25365c9719ea05 691 PIRSF PIRSF015589 2 691 4.5E-272 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 IX88_10755 4e248d1ac7335940ae25365c9719ea05 691 Pfam PF02503 Polyphosphate kinase middle domain 133 330 9.7E-60 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 IX88_10755 4e248d1ac7335940ae25365c9719ea05 691 Gene3D G3DSA:3.30.1840.10 10 321 4.4E-98 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 IX88_10755 4e248d1ac7335940ae25365c9719ea05 691 Pfam PF13090 Polyphosphate kinase C-terminal domain 339 687 7.9E-155 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 IX88_10755 4e248d1ac7335940ae25365c9719ea05 691 Gene3D G3DSA:3.30.870.10 513 690 4.2E-68 T 11-10-2018 IX88_10755 4e248d1ac7335940ae25365c9719ea05 691 SUPERFAMILY SSF56024 324 502 2.04E-54 T 11-10-2018 IX88_10755 4e248d1ac7335940ae25365c9719ea05 691 SUPERFAMILY SSF143724 121 322 2.75E-62 T 11-10-2018 IX88_10755 4e248d1ac7335940ae25365c9719ea05 691 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 18 688 3.1E-281 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 IX88_10755 4e248d1ac7335940ae25365c9719ea05 691 Gene3D G3DSA:3.30.870.10 327 510 2.0E-70 T 11-10-2018 IX88_10755 4e248d1ac7335940ae25365c9719ea05 691 SUPERFAMILY SSF56024 509 689 2.04E-70 T 11-10-2018 IX88_05220 64634d28ad957e60906b59b240932cc9 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 95 2.3E-43 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 IX88_05220 64634d28ad957e60906b59b240932cc9 98 Gene3D G3DSA:4.10.520.10 2 97 3.3E-34 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IX88_05220 64634d28ad957e60906b59b240932cc9 98 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 3.1E-16 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IX88_05220 64634d28ad957e60906b59b240932cc9 98 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 3.1E-16 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IX88_05220 64634d28ad957e60906b59b240932cc9 98 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 3.1E-16 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IX88_05220 64634d28ad957e60906b59b240932cc9 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 29.567 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 IX88_05220 64634d28ad957e60906b59b240932cc9 98 SUPERFAMILY SSF47729 4 94 1.47E-30 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IX88_05220 64634d28ad957e60906b59b240932cc9 98 Pfam PF00216 Bacterial DNA-binding protein 4 92 3.8E-30 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IX88_05220 64634d28ad957e60906b59b240932cc9 98 SMART SM00411 4 93 4.8E-37 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IX88_05220 64634d28ad957e60906b59b240932cc9 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 IX88_00130 29b4739ed3e5a65db03daab99dec320f 137 SUPERFAMILY SSF54686 1 134 3.66E-54 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 IX88_00130 29b4739ed3e5a65db03daab99dec320f 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00130 29b4739ed3e5a65db03daab99dec320f 137 Gene3D G3DSA:3.90.1170.10 1 137 3.8E-55 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 IX88_00130 29b4739ed3e5a65db03daab99dec320f 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 3.3E-47 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 IX88_00130 29b4739ed3e5a65db03daab99dec320f 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 36.874 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00130 29b4739ed3e5a65db03daab99dec320f 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 7.8E-37 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00130 29b4739ed3e5a65db03daab99dec320f 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 7.8E-37 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00130 29b4739ed3e5a65db03daab99dec320f 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 7.8E-37 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00130 29b4739ed3e5a65db03daab99dec320f 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 7.8E-37 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00130 29b4739ed3e5a65db03daab99dec320f 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 4.4E-57 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_10380 8145a15230ac1c21123abc4910e39cbe 374 SMART SM00341 207 287 2.0E-5 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 IX88_10380 8145a15230ac1c21123abc4910e39cbe 374 Gene3D G3DSA:1.10.150.80 297 370 9.3E-10 T 11-10-2018 IX88_10380 8145a15230ac1c21123abc4910e39cbe 374 Pfam PF01612 3'-5' exonuclease 3 168 1.7E-20 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 IX88_10380 8145a15230ac1c21123abc4910e39cbe 374 SMART SM00474 2 169 3.9E-14 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 IX88_10380 8145a15230ac1c21123abc4910e39cbe 374 Gene3D G3DSA:3.30.420.10 1 190 2.6E-43 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IX88_10380 8145a15230ac1c21123abc4910e39cbe 374 Gene3D G3DSA:1.10.150.80 199 287 2.8E-15 T 11-10-2018 IX88_10380 8145a15230ac1c21123abc4910e39cbe 374 SUPERFAMILY SSF53098 3 205 2.47E-44 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_10380 8145a15230ac1c21123abc4910e39cbe 374 SUPERFAMILY SSF47819 198 290 3.36E-19 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 IX88_10380 8145a15230ac1c21123abc4910e39cbe 374 SUPERFAMILY SSF47819 293 368 8.5E-16 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 IX88_10380 8145a15230ac1c21123abc4910e39cbe 374 Pfam PF00570 HRDC domain 210 276 4.0E-16 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 IX88_01160 723904406ddf1c6d3367f91691c6e50b 432 SUPERFAMILY SSF51905 2 411 7.59E-39 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_01160 723904406ddf1c6d3367f91691c6e50b 432 Pfam PF01593 Flavin containing amine oxidoreductase 10 265 3.9E-18 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 IX88_01160 723904406ddf1c6d3367f91691c6e50b 432 Gene3D G3DSA:3.50.50.60 1 281 7.5E-22 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_13895 c349c11dd68e8fcbfad6a09541def5d4 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_13895 c349c11dd68e8fcbfad6a09541def5d4 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.2E-24 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13895 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 6.2E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13895 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 6.2E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13895 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 6.2E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13895 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 6.2E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13895 c349c11dd68e8fcbfad6a09541def5d4 71 Gene3D G3DSA:1.20.5.1150 16 54 1.2E-20 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13895 c349c11dd68e8fcbfad6a09541def5d4 71 Pfam PF01165 Ribosomal protein S21 3 55 4.1E-22 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13895 c349c11dd68e8fcbfad6a09541def5d4 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 5.0E-10 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13895 c349c11dd68e8fcbfad6a09541def5d4 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.252 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_05460 94a00ab96bb8c9349b3812090a78bdae 483 Gene3D G3DSA:3.40.50.1460 291 467 1.1E-9 T 11-10-2018 IX88_05460 94a00ab96bb8c9349b3812090a78bdae 483 Pfam PF01650 Peptidase C13 family 233 440 8.2E-42 T 11-10-2018 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 IX88_05460 94a00ab96bb8c9349b3812090a78bdae 483 SUPERFAMILY SSF52129 286 423 1.31E-7 T 11-10-2018 IPR029030 Caspase-like domain superfamily IX88_07325 9dc72f6732da0b74b5c252aaee715340 350 Gene3D G3DSA:1.10.3720.10 105 339 7.4E-20 T 11-10-2018 IPR035906 MetI-like superfamily IX88_07325 9dc72f6732da0b74b5c252aaee715340 350 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 342 1.0E-34 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_07325 9dc72f6732da0b74b5c252aaee715340 350 SUPERFAMILY SSF161098 111 328 1.2E-13 T 11-10-2018 IPR035906 MetI-like superfamily IX88_17645 4cd1cb4e61a38c53dd36be1e7ab8b488 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 559 6.8E-109 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_17645 4cd1cb4e61a38c53dd36be1e7ab8b488 592 SUPERFAMILY SSF55261 293 422 4.58E-44 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 IX88_17645 4cd1cb4e61a38c53dd36be1e7ab8b488 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 1.2E-241 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 IX88_17645 4cd1cb4e61a38c53dd36be1e7ab8b488 592 SUPERFAMILY SSF55681 118 586 6.27E-104 T 11-10-2018 IX88_17645 4cd1cb4e61a38c53dd36be1e7ab8b488 592 Gene3D G3DSA:2.40.50.140 1 107 2.2E-34 T 11-10-2018 IX88_17645 4cd1cb4e61a38c53dd36be1e7ab8b488 592 Gene3D G3DSA:3.30.1360.30 275 423 1.8E-197 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 IX88_17645 4cd1cb4e61a38c53dd36be1e7ab8b488 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 585 33.43 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 IX88_17645 4cd1cb4e61a38c53dd36be1e7ab8b488 592 Pfam PF01336 OB-fold nucleic acid binding domain 19 103 1.1E-17 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 IX88_17645 4cd1cb4e61a38c53dd36be1e7ab8b488 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 2.1E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_17645 4cd1cb4e61a38c53dd36be1e7ab8b488 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 2.1E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_17645 4cd1cb4e61a38c53dd36be1e7ab8b488 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 2.1E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_17645 4cd1cb4e61a38c53dd36be1e7ab8b488 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 2.1E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_17645 4cd1cb4e61a38c53dd36be1e7ab8b488 592 Pfam PF02938 GAD domain 311 409 2.3E-30 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 IX88_17645 4cd1cb4e61a38c53dd36be1e7ab8b488 592 Gene3D G3DSA:3.30.930.10 120 582 1.8E-197 T 11-10-2018 IX88_17645 4cd1cb4e61a38c53dd36be1e7ab8b488 592 SUPERFAMILY SSF50249 2 106 3.05E-33 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_02640 9351de7785a92d94beabb97671f5d1a2 556 SUPERFAMILY SSF53697 17 552 5.56E-180 T 11-10-2018 IX88_02640 9351de7785a92d94beabb97671f5d1a2 556 Pfam PF00342 Phosphoglucose isomerase 55 547 1.6E-174 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_02640 9351de7785a92d94beabb97671f5d1a2 556 Gene3D G3DSA:3.40.50.10490 101 296 4.0E-205 T 11-10-2018 IX88_02640 9351de7785a92d94beabb97671f5d1a2 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 488 502 7.0E-51 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_02640 9351de7785a92d94beabb97671f5d1a2 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 470 488 7.0E-51 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_02640 9351de7785a92d94beabb97671f5d1a2 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 502 515 7.0E-51 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_02640 9351de7785a92d94beabb97671f5d1a2 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 266 284 7.0E-51 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_02640 9351de7785a92d94beabb97671f5d1a2 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 7.0E-51 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_02640 9351de7785a92d94beabb97671f5d1a2 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 343 364 7.0E-51 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_02640 9351de7785a92d94beabb97671f5d1a2 556 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 270 283 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_02640 9351de7785a92d94beabb97671f5d1a2 556 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 49 529 39.441 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_02640 9351de7785a92d94beabb97671f5d1a2 556 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 502 519 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_02640 9351de7785a92d94beabb97671f5d1a2 556 Gene3D G3DSA:3.40.50.10490 18 511 4.0E-205 T 11-10-2018 IX88_02640 9351de7785a92d94beabb97671f5d1a2 556 Gene3D G3DSA:1.10.1390.10 512 553 1.5E-15 T 11-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_06920 f01ae71d18e2653cfff8a1e21bb83a27 754 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 58 754 2.1E-68 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 IX88_06920 f01ae71d18e2653cfff8a1e21bb83a27 754 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 175 2.5E-28 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_06920 f01ae71d18e2653cfff8a1e21bb83a27 754 Gene3D G3DSA:2.170.130.10 39 180 8.2E-44 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_06920 f01ae71d18e2653cfff8a1e21bb83a27 754 Gene3D G3DSA:2.40.170.20 186 754 8.5E-183 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IX88_06920 f01ae71d18e2653cfff8a1e21bb83a27 754 Pfam PF00593 TonB dependent receptor 293 753 1.5E-52 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_06920 f01ae71d18e2653cfff8a1e21bb83a27 754 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 737 754 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site IX88_06920 f01ae71d18e2653cfff8a1e21bb83a27 754 SUPERFAMILY SSF56935 46 754 4.88E-126 T 11-10-2018 IX88_07705 22f70fb7c3b4c0be57944d3ca6ee1568 140 Pfam PF01037 Lrp/AsnC ligand binding domain 69 135 1.5E-9 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IX88_07705 22f70fb7c3b4c0be57944d3ca6ee1568 140 SMART SM00344 1 107 9.2E-20 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 IX88_07705 22f70fb7c3b4c0be57944d3ca6ee1568 140 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 7.7E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_07705 22f70fb7c3b4c0be57944d3ca6ee1568 140 Gene3D G3DSA:3.30.70.920 56 140 5.3E-13 T 11-10-2018 IX88_07705 22f70fb7c3b4c0be57944d3ca6ee1568 140 Gene3D G3DSA:1.10.10.10 1 52 3.0E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_07705 22f70fb7c3b4c0be57944d3ca6ee1568 140 SUPERFAMILY SSF46785 1 56 2.16E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_07705 22f70fb7c3b4c0be57944d3ca6ee1568 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.8E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_07705 22f70fb7c3b4c0be57944d3ca6ee1568 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.8E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_07705 22f70fb7c3b4c0be57944d3ca6ee1568 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.8E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_07705 22f70fb7c3b4c0be57944d3ca6ee1568 140 SUPERFAMILY SSF54909 64 139 6.43E-11 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel IX88_06500 90988f68417611b67963547f49c198cd 301 Gene3D G3DSA:3.40.50.720 4 300 9.1E-70 T 11-10-2018 IX88_06500 90988f68417611b67963547f49c198cd 301 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 5 294 6.0E-87 T 11-10-2018 IPR010099 Epimerase family protein SDR39U1 IX88_06500 90988f68417611b67963547f49c198cd 301 SUPERFAMILY SSF51735 3 269 2.61E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_06500 90988f68417611b67963547f49c198cd 301 Pfam PF08338 Domain of unknown function (DUF1731) 252 297 5.9E-15 T 11-10-2018 IPR013549 Domain of unknown function DUF1731 IX88_06500 90988f68417611b67963547f49c198cd 301 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 220 2.2E-23 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 IX88_11450 5011ac8ea7d67026189c13499a3bb0a6 768 Gene3D G3DSA:3.30.457.10 39 117 1.5E-21 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily IX88_11450 5011ac8ea7d67026189c13499a3bb0a6 768 ProSitePatterns PS01164 Copper amine oxidase topaquinone signature. 489 502 - T 11-10-2018 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 IX88_11450 5011ac8ea7d67026189c13499a3bb0a6 768 SUPERFAMILY SSF55383 40 118 5.23E-9 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily IX88_11450 5011ac8ea7d67026189c13499a3bb0a6 768 Gene3D G3DSA:2.70.98.20 347 756 3.8E-156 T 11-10-2018 IPR036460 Copper amine oxidase, catalytic domain superfamily GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 IX88_11450 5011ac8ea7d67026189c13499a3bb0a6 768 Pfam PF01179 Copper amine oxidase, enzyme domain 339 756 7.9E-127 T 11-10-2018 IPR015798 Copper amine oxidase, catalytic domain GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 IX88_11450 5011ac8ea7d67026189c13499a3bb0a6 768 Pfam PF07833 Copper amine oxidase N-terminal domain 40 113 2.0E-6 T 11-10-2018 IPR012854 Copper amine oxidase-like, N-terminal IX88_11450 5011ac8ea7d67026189c13499a3bb0a6 768 ProSitePatterns PS01165 Copper amine oxidase copper-binding site signature. 718 731 - T 11-10-2018 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 IX88_11450 5011ac8ea7d67026189c13499a3bb0a6 768 Gene3D G3DSA:3.10.450.40 119 219 5.8E-33 T 11-10-2018 IX88_11450 5011ac8ea7d67026189c13499a3bb0a6 768 Gene3D G3DSA:3.10.450.40 220 325 9.8E-30 T 11-10-2018 IX88_11450 5011ac8ea7d67026189c13499a3bb0a6 768 SUPERFAMILY SSF49998 335 756 5.36E-140 T 11-10-2018 IPR036460 Copper amine oxidase, catalytic domain superfamily GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 IX88_11450 5011ac8ea7d67026189c13499a3bb0a6 768 SUPERFAMILY SSF54416 219 329 1.66E-26 T 11-10-2018 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 IX88_11450 5011ac8ea7d67026189c13499a3bb0a6 768 Pfam PF02728 Copper amine oxidase, N3 domain 219 320 1.9E-22 T 11-10-2018 IPR015802 Copper amine oxidase, N3-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 KEGG: 00260+1.4.3.21|KEGG: 00350+1.4.3.21|KEGG: 00360+1.4.3.21|KEGG: 00410+1.4.3.21|KEGG: 00950+1.4.3.21|KEGG: 00960+1.4.3.21|MetaCyc: PWY-5751|Reactome: R-HSA-211945 IX88_11450 5011ac8ea7d67026189c13499a3bb0a6 768 Pfam PF02727 Copper amine oxidase, N2 domain 127 211 2.6E-12 T 11-10-2018 IPR015800 Copper amine oxidase, N2-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 KEGG: 00260+1.4.3.21|KEGG: 00350+1.4.3.21|KEGG: 00360+1.4.3.21|KEGG: 00410+1.4.3.21|KEGG: 00950+1.4.3.21|KEGG: 00960+1.4.3.21|MetaCyc: PWY-5751|Reactome: R-HSA-211945 IX88_11450 5011ac8ea7d67026189c13499a3bb0a6 768 SUPERFAMILY SSF54416 126 215 6.87E-18 T 11-10-2018 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 IX88_10675 f98b50a6f224ea8780df1c4f189099b3 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 4.9E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10675 f98b50a6f224ea8780df1c4f189099b3 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.9E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10675 f98b50a6f224ea8780df1c4f189099b3 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 4.9E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10675 f98b50a6f224ea8780df1c4f189099b3 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 245 1.5E-56 T 11-10-2018 IX88_10675 f98b50a6f224ea8780df1c4f189099b3 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.7E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10675 f98b50a6f224ea8780df1c4f189099b3 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.7E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10675 f98b50a6f224ea8780df1c4f189099b3 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 5.7E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10675 f98b50a6f224ea8780df1c4f189099b3 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 5.7E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10675 f98b50a6f224ea8780df1c4f189099b3 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 5.7E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10675 f98b50a6f224ea8780df1c4f189099b3 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 5.7E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10675 f98b50a6f224ea8780df1c4f189099b3 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_10675 f98b50a6f224ea8780df1c4f189099b3 261 Gene3D G3DSA:3.40.50.720 1 250 2.5E-66 T 11-10-2018 IX88_10675 f98b50a6f224ea8780df1c4f189099b3 261 SUPERFAMILY SSF51735 6 248 1.62E-67 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_00165 cd2aaa5092bf4460911188f6f169176b 212 Gene3D G3DSA:2.40.50.620 34 95 1.0E-15 T 11-10-2018 IX88_00165 cd2aaa5092bf4460911188f6f169176b 212 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.688 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00165 cd2aaa5092bf4460911188f6f169176b 212 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 4.6E-86 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00165 cd2aaa5092bf4460911188f6f169176b 212 Pfam PF00297 Ribosomal protein L3 51 185 3.1E-14 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00165 cd2aaa5092bf4460911188f6f169176b 212 Gene3D G3DSA:2.40.30.10 132 212 2.4E-14 T 11-10-2018 IX88_00165 cd2aaa5092bf4460911188f6f169176b 212 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site IX88_00165 cd2aaa5092bf4460911188f6f169176b 212 SUPERFAMILY SSF50447 2 211 6.62E-78 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IX88_13020 dcc546202bb4c35e8c12737343d93823 283 Gene3D G3DSA:3.20.80.10 129 283 2.2E-31 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily IX88_13020 dcc546202bb4c35e8c12737343d93823 283 Pfam PF12833 Helix-turn-helix domain 28 107 8.7E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_13020 dcc546202bb4c35e8c12737343d93823 283 Pfam PF06445 GyrI-like small molecule binding domain 129 282 2.4E-27 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain IX88_13020 dcc546202bb4c35e8c12737343d93823 283 SUPERFAMILY SSF55136 129 282 8.89E-34 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily IX88_13020 dcc546202bb4c35e8c12737343d93823 283 SUPERFAMILY SSF46689 59 113 8.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_13020 dcc546202bb4c35e8c12737343d93823 283 Gene3D G3DSA:1.10.10.60 5 59 5.7E-12 T 11-10-2018 IX88_13020 dcc546202bb4c35e8c12737343d93823 283 Gene3D G3DSA:1.10.10.60 60 121 3.9E-15 T 11-10-2018 IX88_13020 dcc546202bb4c35e8c12737343d93823 283 SMART SM00871 129 283 2.6E-37 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding IX88_13020 dcc546202bb4c35e8c12737343d93823 283 SUPERFAMILY SSF46689 6 56 1.7E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_13020 dcc546202bb4c35e8c12737343d93823 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 102 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 IX88_13020 dcc546202bb4c35e8c12737343d93823 283 SMART SM00342 22 106 9.6E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_13020 dcc546202bb4c35e8c12737343d93823 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 2.2E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_13020 dcc546202bb4c35e8c12737343d93823 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 2.2E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_13920 2d67444069be307cc043e15a9aa122e0 629 Gene3D G3DSA:3.30.2010.10 92 183 3.3E-14 T 11-10-2018 IX88_13920 2d67444069be307cc043e15a9aa122e0 629 Pfam PF01435 Peptidase family M48 108 318 2.0E-6 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 IX88_09310 161227d12a7d5808e1ef65b74f51aa18 210 Pfam PF01810 LysE type translocator 14 208 1.2E-18 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_16695 50b54e6a83815f6f3319a4fe8680d7da 946 Pfam PF02779 Transketolase, pyrimidine binding domain 593 787 8.1E-64 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain IX88_16695 50b54e6a83815f6f3319a4fe8680d7da 946 Pfam PF00676 Dehydrogenase E1 component 212 515 3.1E-52 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 IX88_16695 50b54e6a83815f6f3319a4fe8680d7da 946 Gene3D G3DSA:3.40.50.12470 556 802 2.6E-165 T 11-10-2018 IX88_16695 50b54e6a83815f6f3319a4fe8680d7da 946 Gene3D G3DSA:1.10.287.1150 82 164 5.8E-26 T 11-10-2018 IX88_16695 50b54e6a83815f6f3319a4fe8680d7da 946 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 14 50 4.0E-14 T 11-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 IX88_16695 50b54e6a83815f6f3319a4fe8680d7da 946 SMART SM00861 593 786 3.7E-60 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain IX88_16695 50b54e6a83815f6f3319a4fe8680d7da 946 SUPERFAMILY SSF52518 119 546 4.21E-90 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_16695 50b54e6a83815f6f3319a4fe8680d7da 946 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 935 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 IX88_16695 50b54e6a83815f6f3319a4fe8680d7da 946 SUPERFAMILY SSF52518 575 793 3.83E-49 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_16695 50b54e6a83815f6f3319a4fe8680d7da 946 PIRSF PIRSF000157 1 937 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 IX88_16695 50b54e6a83815f6f3319a4fe8680d7da 946 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 935 1.3E-50 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 IX88_16695 50b54e6a83815f6f3319a4fe8680d7da 946 Gene3D G3DSA:3.40.50.970 165 525 1.1E-148 T 11-10-2018 IX88_16695 50b54e6a83815f6f3319a4fe8680d7da 946 Gene3D G3DSA:3.40.50.11610 723 932 2.6E-165 T 11-10-2018 IX88_03930 bc78339269e8bfc1f04ddfbdf7070651 286 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 22 128 1.2E-32 T 11-10-2018 IPR010627 Peptidase A24A, N-terminal IX88_03930 bc78339269e8bfc1f04ddfbdf7070651 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 227 242 2.6E-25 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial IX88_03930 bc78339269e8bfc1f04ddfbdf7070651 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 147 164 2.6E-25 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial IX88_03930 bc78339269e8bfc1f04ddfbdf7070651 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 204 214 2.6E-25 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial IX88_03930 bc78339269e8bfc1f04ddfbdf7070651 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 215 226 2.6E-25 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial IX88_03930 bc78339269e8bfc1f04ddfbdf7070651 286 Pfam PF01478 Type IV leader peptidase family 138 247 1.0E-22 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 SUPERFAMILY SSF82693 168 346 1.92E-22 T 11-10-2018 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 SUPERFAMILY SSF82866 312 519 6.02E-37 T 11-10-2018 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 SUPERFAMILY SSF82866 822 1043 1.22E-51 T 11-10-2018 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 SUPERFAMILY SSF82714 739 823 3.01E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 Gene3D G3DSA:3.30.70.1440 689 884 1.4E-288 T 11-10-2018 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 Gene3D G3DSA:3.30.2090.10 202 293 1.4E-288 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 Gene3D G3DSA:1.20.1640.10 28 528 1.4E-288 T 11-10-2018 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 Gene3D G3DSA:3.30.2090.10 740 827 1.4E-288 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 15 1048 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 Pfam PF00873 AcrB/AcrD/AcrF family 19 1040 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 SUPERFAMILY SSF82693 55 141 4.97E-23 T 11-10-2018 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 Gene3D G3DSA:3.30.70.1430 55 835 1.4E-288 T 11-10-2018 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 SUPERFAMILY SSF82693 587 679 2.44E-5 T 11-10-2018 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 Gene3D G3DSA:3.30.70.1430 583 688 1.4E-288 T 11-10-2018 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 PRINTS PR00702 Acriflavin resistance protein family signature 53 71 2.1E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 PRINTS PR00702 Acriflavin resistance protein family signature 379 400 2.1E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 PRINTS PR00702 Acriflavin resistance protein family signature 25 49 2.1E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 PRINTS PR00702 Acriflavin resistance protein family signature 566 583 2.1E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 PRINTS PR00702 Acriflavin resistance protein family signature 493 516 2.1E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 PRINTS PR00702 Acriflavin resistance protein family signature 352 375 2.1E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 Gene3D G3DSA:3.30.70.1320 148 346 1.4E-288 T 11-10-2018 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 Gene3D G3DSA:1.20.1640.10 529 1038 1.4E-288 T 11-10-2018 IX88_00850 c6eae61e7fad46f24f737401a7c34053 1052 SUPERFAMILY SSF82714 206 288 3.01E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_00255 dfc50300863cef29271967e461180b5e 337 Pfam PF01544 CorA-like Mg2+ transporter protein 27 332 1.3E-54 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 IX88_00255 dfc50300863cef29271967e461180b5e 337 SUPERFAMILY SSF143865 2 274 1.03E-35 T 11-10-2018 IX88_00255 dfc50300863cef29271967e461180b5e 337 Gene3D G3DSA:3.30.460.20 2 138 4.1E-5 T 11-10-2018 IX88_00255 dfc50300863cef29271967e461180b5e 337 Gene3D G3DSA:1.20.58.340 261 337 1.6E-15 T 11-10-2018 IX88_00255 dfc50300863cef29271967e461180b5e 337 SUPERFAMILY SSF144083 272 335 4.97E-14 T 11-10-2018 IX88_04460 dd7f17f24f7ccb094401e3d6317c97fd 335 Pfam PF01757 Acyltransferase family 6 302 1.2E-10 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 IX88_12210 b3f256618816bf36baaf13a1cb523d8e 307 Gene3D G3DSA:3.30.70.640 1 146 1.2E-47 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 IX88_12210 b3f256618816bf36baaf13a1cb523d8e 307 SMART SM00852 151 293 8.8E-21 T 11-10-2018 IPR001453 MoaB/Mog domain IX88_12210 b3f256618816bf36baaf13a1cb523d8e 307 Pfam PF00994 Probable molybdopterin binding domain 151 291 1.1E-29 T 11-10-2018 IPR001453 MoaB/Mog domain IX88_12210 b3f256618816bf36baaf13a1cb523d8e 307 Pfam PF01967 MoaC family 1 136 1.5E-41 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 IX88_12210 b3f256618816bf36baaf13a1cb523d8e 307 Gene3D G3DSA:3.40.980.10 147 302 4.0E-45 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily IX88_12210 b3f256618816bf36baaf13a1cb523d8e 307 SUPERFAMILY SSF53218 147 298 1.11E-36 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily IX88_12210 b3f256618816bf36baaf13a1cb523d8e 307 SUPERFAMILY SSF55040 1 140 1.7E-44 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 IX88_12210 b3f256618816bf36baaf13a1cb523d8e 307 PIRSF PIRSF036594 1 304 1.6E-65 T 11-10-2018 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823 IX88_12210 b3f256618816bf36baaf13a1cb523d8e 307 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 149 287 1.7E-27 T 11-10-2018 IPR001453 MoaB/Mog domain IX88_03975 63af3c5a184edac3eed67dfff9c94907 174 Gene3D G3DSA:3.30.300.70 2 58 1.3E-5 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily IX88_03975 63af3c5a184edac3eed67dfff9c94907 174 Gene3D G3DSA:3.30.300.70 59 100 7.0E-11 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily IX88_03975 63af3c5a184edac3eed67dfff9c94907 174 Pfam PF02576 RimP N-terminal domain 13 103 1.0E-20 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal IX88_03975 63af3c5a184edac3eed67dfff9c94907 174 SUPERFAMILY SSF75420 4 103 7.19E-20 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily IX88_03975 63af3c5a184edac3eed67dfff9c94907 174 Pfam PF17384 RimP C-terminal SH3 domain 107 172 1.3E-12 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal IX88_03975 63af3c5a184edac3eed67dfff9c94907 174 SUPERFAMILY SSF74942 104 173 5.1E-11 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily IX88_03975 63af3c5a184edac3eed67dfff9c94907 174 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 8 174 21.799 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 IX88_15725 feaf69264996f174ec9424083af3366b 673 Gene3D G3DSA:3.40.50.300 1 238 8.8E-77 T 11-10-2018 IX88_15725 feaf69264996f174ec9424083af3366b 673 SMART SM00490 461 547 3.1E-21 T 11-10-2018 IPR001650 Helicase, C-terminal IX88_15725 feaf69264996f174ec9424083af3366b 673 Gene3D G3DSA:3.40.50.300 416 590 9.8E-50 T 11-10-2018 IX88_15725 feaf69264996f174ec9424083af3366b 673 Gene3D G3DSA:4.10.860.10 615 673 5.4E-10 T 11-10-2018 IX88_15725 feaf69264996f174ec9424083af3366b 673 Pfam PF12344 Ultra-violet resistance protein B 553 593 1.7E-21 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain IX88_15725 feaf69264996f174ec9424083af3366b 673 Gene3D G3DSA:3.40.50.300 267 415 2.4E-52 T 11-10-2018 IX88_15725 feaf69264996f174ec9424083af3366b 673 Pfam PF04851 Type III restriction enzyme, res subunit 17 89 2.3E-11 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 IX88_15725 feaf69264996f174ec9424083af3366b 673 SMART SM00487 11 427 8.2E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain IX88_15725 feaf69264996f174ec9424083af3366b 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 5 670 43.31 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 IX88_15725 feaf69264996f174ec9424083af3366b 673 SUPERFAMILY SSF46600 634 672 3.53E-11 T 11-10-2018 IPR036876 UVR domain superfamily IX88_15725 feaf69264996f174ec9424083af3366b 673 SUPERFAMILY SSF52540 5 416 4.6E-144 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_15725 feaf69264996f174ec9424083af3366b 673 Pfam PF00271 Helicase conserved C-terminal domain 442 545 5.4E-18 T 11-10-2018 IPR001650 Helicase, C-terminal IX88_15725 feaf69264996f174ec9424083af3366b 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 7 668 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 IX88_15725 feaf69264996f174ec9424083af3366b 673 Pfam PF02151 UvrB/uvrC motif 638 670 9.2E-10 T 11-10-2018 IPR001943 UVR domain GO:0005515 IX88_15725 feaf69264996f174ec9424083af3366b 673 SUPERFAMILY SSF52540 35 587 5.94E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_14545 9b29d7ed1c9fbeb1a47b30c825f67cba 311 SMART SM00382 30 213 4.6E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_14545 9b29d7ed1c9fbeb1a47b30c825f67cba 311 Gene3D G3DSA:3.40.50.300 1 236 9.8E-63 T 11-10-2018 IX88_14545 9b29d7ed1c9fbeb1a47b30c825f67cba 311 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_14545 9b29d7ed1c9fbeb1a47b30c825f67cba 311 SUPERFAMILY SSF52540 4 228 1.3E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_14545 9b29d7ed1c9fbeb1a47b30c825f67cba 311 Pfam PF00005 ABC transporter 21 165 2.7E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_03825 cfd3f901b1f90d4adbc0d3cc271fa753 390 Pfam PF02803 Thiolase, C-terminal domain 265 389 3.7E-47 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 IX88_03825 cfd3f901b1f90d4adbc0d3cc271fa753 390 SUPERFAMILY SSF53901 266 389 5.47E-44 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_03825 cfd3f901b1f90d4adbc0d3cc271fa753 390 Gene3D G3DSA:3.40.47.10 9 271 1.1E-142 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_03825 cfd3f901b1f90d4adbc0d3cc271fa753 390 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 IX88_03825 cfd3f901b1f90d4adbc0d3cc271fa753 390 Pfam PF00108 Thiolase, N-terminal domain 9 257 4.5E-73 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 IX88_03825 cfd3f901b1f90d4adbc0d3cc271fa753 390 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 6 390 62.075 T 11-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 IX88_03825 cfd3f901b1f90d4adbc0d3cc271fa753 390 ProSitePatterns PS00099 Thiolases active site. 371 384 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 IX88_03825 cfd3f901b1f90d4adbc0d3cc271fa753 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 11 388 7.3E-130 T 11-10-2018 IPR002155 Thiolase GO:0016747 IX88_03825 cfd3f901b1f90d4adbc0d3cc271fa753 390 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 IX88_03825 cfd3f901b1f90d4adbc0d3cc271fa753 390 PIRSF PIRSF000429 3 390 1.6E-124 T 11-10-2018 IPR002155 Thiolase GO:0016747 IX88_03825 cfd3f901b1f90d4adbc0d3cc271fa753 390 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 8 390 4.8E-192 T 11-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 IX88_03825 cfd3f901b1f90d4adbc0d3cc271fa753 390 SUPERFAMILY SSF53901 5 262 2.47E-73 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_03825 cfd3f901b1f90d4adbc0d3cc271fa753 390 Gene3D G3DSA:3.40.47.10 138 384 1.1E-142 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_06625 fd6ecd1b658c096ac940c4a69c45366b 292 Gene3D G3DSA:3.20.20.330 1 292 3.1E-67 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 IX88_06625 fd6ecd1b658c096ac940c4a69c45366b 292 SUPERFAMILY SSF82282 2 291 2.22E-75 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 IX88_06625 fd6ecd1b658c096ac940c4a69c45366b 292 Pfam PF02574 Homocysteine S-methyltransferase 3 288 1.6E-56 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 IX88_06625 fd6ecd1b658c096ac940c4a69c45366b 292 PIRSF PIRSF037505 1 291 1.6E-8 T 11-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 IX88_13725 9d409b501bcdda4e4a6885c03a1120be 232 Gene3D G3DSA:1.10.10.10 3 80 1.2E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_13725 9d409b501bcdda4e4a6885c03a1120be 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.4E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_13725 9d409b501bcdda4e4a6885c03a1120be 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.4E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_13725 9d409b501bcdda4e4a6885c03a1120be 232 Pfam PF07729 FCD domain 94 214 7.9E-15 T 11-10-2018 IPR011711 GntR, C-terminal IX88_13725 9d409b501bcdda4e4a6885c03a1120be 232 SMART SM00345 14 73 1.2E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_13725 9d409b501bcdda4e4a6885c03a1120be 232 SMART SM00895 93 216 5.7E-10 T 11-10-2018 IPR011711 GntR, C-terminal IX88_13725 9d409b501bcdda4e4a6885c03a1120be 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 1.3E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_13725 9d409b501bcdda4e4a6885c03a1120be 232 Gene3D G3DSA:1.20.120.530 88 226 7.7E-18 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_13725 9d409b501bcdda4e4a6885c03a1120be 232 SUPERFAMILY SSF46785 1 77 3.85E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_13725 9d409b501bcdda4e4a6885c03a1120be 232 SUPERFAMILY SSF48008 89 220 4.18E-19 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_13225 2bb5d7c399071d75eb2f54d409d5f6e5 238 Gene3D G3DSA:3.40.50.2300 3 133 8.1E-33 T 11-10-2018 IX88_13225 2bb5d7c399071d75eb2f54d409d5f6e5 238 Gene3D G3DSA:1.10.10.10 134 237 1.2E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_13225 2bb5d7c399071d75eb2f54d409d5f6e5 238 Pfam PF00072 Response regulator receiver domain 13 122 1.6E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_13225 2bb5d7c399071d75eb2f54d409d5f6e5 238 SMART SM00448 11 121 4.4E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_13225 2bb5d7c399071d75eb2f54d409d5f6e5 238 SUPERFAMILY SSF52172 11 190 9.25E-38 T 11-10-2018 IPR011006 CheY-like superfamily IX88_13225 2bb5d7c399071d75eb2f54d409d5f6e5 238 SMART SM00862 155 231 2.5E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_13225 2bb5d7c399071d75eb2f54d409d5f6e5 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 7.1E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_00635 e487c039b5b61cb197065aae891f3853 701 Gene3D G3DSA:3.10.20.30 375 445 2.9E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily IX88_00635 e487c039b5b61cb197065aae891f3853 701 SMART SM00471 47 157 2.4E-10 T 11-10-2018 IPR003607 HD/PDEase domain IX88_00635 e487c039b5b61cb197065aae891f3853 701 Gene3D G3DSA:3.30.460.10 197 325 1.4E-6 T 11-10-2018 IX88_00635 e487c039b5b61cb197065aae891f3853 701 Pfam PF13328 HD domain 32 178 2.7E-37 T 11-10-2018 IPR003607 HD/PDEase domain IX88_00635 e487c039b5b61cb197065aae891f3853 701 Pfam PF02824 TGS domain 381 440 7.5E-16 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 IX88_00635 e487c039b5b61cb197065aae891f3853 701 SUPERFAMILY SSF109604 16 194 9.42E-60 T 11-10-2018 IX88_00635 e487c039b5b61cb197065aae891f3853 701 SUPERFAMILY SSF81271 381 440 5.23E-14 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 IX88_00635 e487c039b5b61cb197065aae891f3853 701 Gene3D G3DSA:1.10.3210.10 3 194 4.1E-65 T 11-10-2018 IX88_00635 e487c039b5b61cb197065aae891f3853 701 SUPERFAMILY SSF81301 201 354 2.29E-18 T 11-10-2018 IX88_00635 e487c039b5b61cb197065aae891f3853 701 SMART SM00954 235 345 7.7E-6 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 IX88_11625 c242362ee9c1328c6901838f7d3b090b 403 Gene3D G3DSA:3.40.47.10 8 284 3.4E-158 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_11625 c242362ee9c1328c6901838f7d3b090b 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 88 106 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 IX88_11625 c242362ee9c1328c6901838f7d3b090b 403 ProSitePatterns PS00099 Thiolases active site. 384 397 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 IX88_11625 c242362ee9c1328c6901838f7d3b090b 403 PIRSF PIRSF000429 1 403 8.8E-133 T 11-10-2018 IPR002155 Thiolase GO:0016747 IX88_11625 c242362ee9c1328c6901838f7d3b090b 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 401 5.6E-140 T 11-10-2018 IPR002155 Thiolase GO:0016747 IX88_11625 c242362ee9c1328c6901838f7d3b090b 403 Pfam PF00108 Thiolase, N-terminal domain 7 270 1.2E-80 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 IX88_11625 c242362ee9c1328c6901838f7d3b090b 403 Pfam PF02803 Thiolase, C-terminal domain 278 402 2.7E-46 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 IX88_11625 c242362ee9c1328c6901838f7d3b090b 403 SUPERFAMILY SSF53901 279 402 1.27E-44 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_11625 c242362ee9c1328c6901838f7d3b090b 403 SUPERFAMILY SSF53901 5 278 4.17E-83 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_11625 c242362ee9c1328c6901838f7d3b090b 403 Gene3D G3DSA:3.40.47.10 143 400 3.4E-158 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_11625 c242362ee9c1328c6901838f7d3b090b 403 ProSitePatterns PS00737 Thiolases signature 2. 349 365 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 IX88_11625 c242362ee9c1328c6901838f7d3b090b 403 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 4 403 2.9E-227 T 11-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 IX88_12040 70aa42017979d195596ea21f2fc97ffb 294 Pfam PF16331 TolA binding protein trimerisation 50 103 1.1E-10 T 11-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 IX88_12040 70aa42017979d195596ea21f2fc97ffb 294 SUPERFAMILY SSF48452 176 290 1.3E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_12040 70aa42017979d195596ea21f2fc97ffb 294 Pfam PF13174 Tetratricopeptide repeat 178 209 0.012 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IX88_12040 70aa42017979d195596ea21f2fc97ffb 294 Pfam PF13174 Tetratricopeptide repeat 215 248 0.039 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IX88_12040 70aa42017979d195596ea21f2fc97ffb 294 Gene3D G3DSA:1.25.40.10 175 293 6.7E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_06115 d2093e5a98a3e1870c4217707dd379f8 186 Pfam PF14345 GDYXXLXY protein 14 161 5.0E-18 T 11-10-2018 IPR025833 GDYXXLXY protein IX88_10225 a05033bd9970ed172697bff99e7aa78c 199 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 194 2.6E-43 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 IX88_10225 a05033bd9970ed172697bff99e7aa78c 199 SUPERFAMILY SSF53254 4 191 5.15E-45 T 11-10-2018 IPR029033 Histidine phosphatase superfamily IX88_10225 a05033bd9970ed172697bff99e7aa78c 199 PIRSF PIRSF000709 1 196 6.2E-10 T 11-10-2018 IX88_10225 a05033bd9970ed172697bff99e7aa78c 199 Gene3D G3DSA:3.40.50.1240 4 198 2.4E-44 T 11-10-2018 IPR029033 Histidine phosphatase superfamily IX88_10225 a05033bd9970ed172697bff99e7aa78c 199 SMART SM00855 5 160 8.2E-11 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 IX88_09980 83d36bc65ead7b5b4f725a4ce808c0c9 576 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 272 0.13 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 IX88_09980 83d36bc65ead7b5b4f725a4ce808c0c9 576 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 544 570 0.0018 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 IX88_09980 83d36bc65ead7b5b4f725a4ce808c0c9 576 Gene3D G3DSA:3.40.50.300 8 304 2.1E-81 T 11-10-2018 IX88_09980 83d36bc65ead7b5b4f725a4ce808c0c9 576 Gene3D G3DSA:3.40.50.300 313 575 4.9E-83 T 11-10-2018 IX88_09980 83d36bc65ead7b5b4f725a4ce808c0c9 576 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_09980 83d36bc65ead7b5b4f725a4ce808c0c9 576 SUPERFAMILY SSF52540 315 564 4.77E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_09980 83d36bc65ead7b5b4f725a4ce808c0c9 576 SUPERFAMILY SSF52540 10 263 1.57E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_09980 83d36bc65ead7b5b4f725a4ce808c0c9 576 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_09980 83d36bc65ead7b5b4f725a4ce808c0c9 576 Pfam PF00005 ABC transporter 32 191 1.4E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_09980 83d36bc65ead7b5b4f725a4ce808c0c9 576 Pfam PF00005 ABC transporter 341 491 2.2E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_09980 83d36bc65ead7b5b4f725a4ce808c0c9 576 SMART SM00382 349 542 4.7E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_09980 83d36bc65ead7b5b4f725a4ce808c0c9 576 SMART SM00382 40 241 4.9E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 SUPERFAMILY SSF81665 53 916 8.76E-98 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 38 918 0.0 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 PRINTS PR01836 Magnesium-transporting ATPase signature 305 321 1.2E-78 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 PRINTS PR01836 Magnesium-transporting ATPase signature 872 893 1.2E-78 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 PRINTS PR01836 Magnesium-transporting ATPase signature 322 341 1.2E-78 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 PRINTS PR01836 Magnesium-transporting ATPase signature 767 780 1.2E-78 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 PRINTS PR01836 Magnesium-transporting ATPase signature 717 732 1.2E-78 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 PRINTS PR01836 Magnesium-transporting ATPase signature 426 439 1.2E-78 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 PRINTS PR01836 Magnesium-transporting ATPase signature 822 843 1.2E-78 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 PRINTS PR01836 Magnesium-transporting ATPase signature 735 746 1.2E-78 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 PRINTS PR01836 Magnesium-transporting ATPase signature 787 803 1.2E-78 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 SUPERFAMILY SSF81660 361 561 1.24E-42 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 Gene3D G3DSA:1.20.1110.10 275 403 6.9E-10 T 11-10-2018 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 Pfam PF00690 Cation transporter/ATPase, N-terminus 55 117 5.1E-12 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 628 748 3.9E-29 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 193 413 3.9E-30 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 Pfam PF00702 haloacid dehalogenase-like hydrolase 388 673 3.8E-20 T 11-10-2018 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 Gene3D G3DSA:1.20.1110.10 700 821 1.2E-9 T 11-10-2018 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 SMART SM00831 49 122 4.5E-8 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 SUPERFAMILY SSF56784 549 704 9.61E-39 T 11-10-2018 IPR036412 HAD-like superfamily IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 Gene3D G3DSA:2.70.150.10 136 273 6.3E-28 T 11-10-2018 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 394 400 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 SUPERFAMILY SSF81653 191 291 1.07E-27 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 Gene3D G3DSA:3.40.1110.10 404 566 4.0E-57 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 Pfam PF00122 E1-E2 ATPase 189 372 4.0E-44 T 11-10-2018 IX88_12850 556a6b64b3c2d02386c42c8efe50a4d0 918 Gene3D G3DSA:3.40.50.1000 567 699 1.5E-22 T 11-10-2018 IPR023214 HAD superfamily IX88_02510 7fcc77b50973c61d3310bc60fa252e37 215 SUPERFAMILY SSF46689 12 71 9.75E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_02510 7fcc77b50973c61d3310bc60fa252e37 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 6.7E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_02510 7fcc77b50973c61d3310bc60fa252e37 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.7E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_02510 7fcc77b50973c61d3310bc60fa252e37 215 Gene3D G3DSA:1.10.357.10 5 170 1.4E-13 T 11-10-2018 IX88_02510 7fcc77b50973c61d3310bc60fa252e37 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.1E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_06640 6a2ddf85cbfc8301e80be95c6307effa 552 Gene3D G3DSA:3.30.410.40 155 478 4.9E-173 T 11-10-2018 IX88_06640 6a2ddf85cbfc8301e80be95c6307effa 552 Pfam PF00732 GMC oxidoreductase 6 304 2.3E-96 T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 IX88_06640 6a2ddf85cbfc8301e80be95c6307effa 552 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 85 108 - T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 IX88_06640 6a2ddf85cbfc8301e80be95c6307effa 552 SUPERFAMILY SSF54373 299 481 1.47E-64 T 11-10-2018 IX88_06640 6a2ddf85cbfc8301e80be95c6307effa 552 Gene3D G3DSA:1.10.1220.110 100 154 4.9E-173 T 11-10-2018 IX88_06640 6a2ddf85cbfc8301e80be95c6307effa 552 SUPERFAMILY SSF51905 4 539 4.46E-81 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_06640 6a2ddf85cbfc8301e80be95c6307effa 552 PIRSF PIRSF000137 1 543 8.9E-137 T 11-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 IX88_06640 6a2ddf85cbfc8301e80be95c6307effa 552 Pfam PF05199 GMC oxidoreductase 397 531 4.3E-41 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 IX88_06640 6a2ddf85cbfc8301e80be95c6307effa 552 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 263 277 - T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 IX88_06640 6a2ddf85cbfc8301e80be95c6307effa 552 TIGRFAM TIGR01810 betA: choline dehydrogenase 7 541 2.7E-283 T 11-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 IX88_06640 6a2ddf85cbfc8301e80be95c6307effa 552 Gene3D G3DSA:3.50.50.60 5 535 4.9E-173 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_06640 6a2ddf85cbfc8301e80be95c6307effa 552 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 4 552 59.47 T 11-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 IX88_06640 6a2ddf85cbfc8301e80be95c6307effa 552 Gene3D G3DSA:4.10.450.10 39 202 4.9E-173 T 11-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 IX88_05150 ace2cc6d589133d12fad9491be198113 178 PIRSF PIRSF016183 3 177 2.2E-41 T 11-10-2018 IPR006839 Ribosome-associated, YjgA IX88_05150 ace2cc6d589133d12fad9491be198113 178 Pfam PF04751 Protein of unknown function (DUF615) 19 151 3.5E-32 T 11-10-2018 IPR006839 Ribosome-associated, YjgA IX88_05150 ace2cc6d589133d12fad9491be198113 178 Gene3D G3DSA:1.10.60.30 29 104 1.7E-19 T 11-10-2018 IX88_05150 ace2cc6d589133d12fad9491be198113 178 SUPERFAMILY SSF158710 30 169 5.89E-35 T 11-10-2018 IPR023153 PSPTO4464-like domain superfamily IX88_18000 148e90f99dbaaca65fbc63b1615521ff 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 128 140 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 IX88_18000 148e90f99dbaaca65fbc63b1615521ff 387 SUPERFAMILY SSF56645 5 244 1.57E-79 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_18000 148e90f99dbaaca65fbc63b1615521ff 387 SUPERFAMILY SSF47203 231 385 1.48E-46 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_18000 148e90f99dbaaca65fbc63b1615521ff 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 122 1.4E-30 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_18000 148e90f99dbaaca65fbc63b1615521ff 387 Gene3D G3DSA:1.20.140.10 239 387 8.0E-46 T 11-10-2018 IX88_18000 148e90f99dbaaca65fbc63b1615521ff 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 385 5.2E-47 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_18000 148e90f99dbaaca65fbc63b1615521ff 387 Gene3D G3DSA:2.40.110.10 125 238 4.9E-41 T 11-10-2018 IX88_18000 148e90f99dbaaca65fbc63b1615521ff 387 Gene3D G3DSA:1.10.540.10 1 124 2.1E-35 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_18000 148e90f99dbaaca65fbc63b1615521ff 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 221 1.6E-22 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_02415 9e0507ecff5527f35c8c9bfb640395a9 176 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 109 124 1.7E-19 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 IX88_02415 9e0507ecff5527f35c8c9bfb640395a9 176 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 61 69 1.7E-19 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 IX88_02415 9e0507ecff5527f35c8c9bfb640395a9 176 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 145 161 1.7E-19 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 IX88_02415 9e0507ecff5527f35c8c9bfb640395a9 176 Pfam PF01252 Signal peptidase (SPase) II 24 165 3.4E-38 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 IX88_02415 9e0507ecff5527f35c8c9bfb640395a9 176 ProSitePatterns PS00855 Signal peptidases II signature. 112 124 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 IX88_02415 9e0507ecff5527f35c8c9bfb640395a9 176 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 15 170 17.593 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 IX88_02415 9e0507ecff5527f35c8c9bfb640395a9 176 TIGRFAM TIGR00077 lspA: signal peptidase II 18 170 2.9E-41 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 IX88_08845 2247f0f36d005467ecbd3d12c39e9416 301 Pfam PF03466 LysR substrate binding domain 94 298 9.8E-38 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_08845 2247f0f36d005467ecbd3d12c39e9416 301 Gene3D G3DSA:3.40.190.10 95 296 8.1E-60 T 11-10-2018 IX88_08845 2247f0f36d005467ecbd3d12c39e9416 301 SUPERFAMILY SSF53850 94 298 1.03E-39 T 11-10-2018 IX88_08845 2247f0f36d005467ecbd3d12c39e9416 301 Gene3D G3DSA:1.10.10.10 8 93 2.7E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_08845 2247f0f36d005467ecbd3d12c39e9416 301 Gene3D G3DSA:3.40.190.10 167 268 8.1E-60 T 11-10-2018 IX88_08845 2247f0f36d005467ecbd3d12c39e9416 301 SUPERFAMILY SSF46785 10 115 1.18E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_08845 2247f0f36d005467ecbd3d12c39e9416 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 67 7.1E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_18240 86536e39caa9d1de6ee39dad59894cb1 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 134 230 1.9E-26 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_18240 86536e39caa9d1de6ee39dad59894cb1 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 242 389 1.9E-40 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_18240 86536e39caa9d1de6ee39dad59894cb1 390 Gene3D G3DSA:1.10.540.10 11 132 1.0E-39 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_18240 86536e39caa9d1de6ee39dad59894cb1 390 SUPERFAMILY SSF56645 14 253 4.32E-88 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_18240 86536e39caa9d1de6ee39dad59894cb1 390 Gene3D G3DSA:2.40.110.10 133 248 1.7E-41 T 11-10-2018 IX88_18240 86536e39caa9d1de6ee39dad59894cb1 390 SUPERFAMILY SSF47203 241 390 8.86E-46 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_18240 86536e39caa9d1de6ee39dad59894cb1 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 349 368 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 IX88_18240 86536e39caa9d1de6ee39dad59894cb1 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 19 130 1.1E-36 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_18240 86536e39caa9d1de6ee39dad59894cb1 390 Gene3D G3DSA:1.20.140.10 249 390 5.0E-43 T 11-10-2018 IX88_11020 901e8f9686159a16f5ed56ddaf95eb21 146 Gene3D G3DSA:1.10.3210.10 2 146 1.3E-21 T 11-10-2018 IX88_11020 901e8f9686159a16f5ed56ddaf95eb21 146 Pfam PF13328 HD domain 11 93 5.1E-9 T 11-10-2018 IPR003607 HD/PDEase domain IX88_11020 901e8f9686159a16f5ed56ddaf95eb21 146 SUPERFAMILY SSF109604 4 138 4.08E-22 T 11-10-2018 IX88_12240 52ccd852d58dddb1e447f4c79858bcc6 926 Gene3D G3DSA:3.40.50.740 91 567 6.7E-171 T 11-10-2018 IX88_12240 52ccd852d58dddb1e447f4c79858bcc6 926 Pfam PF00384 Molybdopterin oxidoreductase 90 504 5.7E-83 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_12240 52ccd852d58dddb1e447f4c79858bcc6 926 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 17 70 1.2E-19 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_12240 52ccd852d58dddb1e447f4c79858bcc6 926 Pfam PF04324 BFD-like [2Fe-2S] binding domain 869 918 9.0E-12 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain IX88_12240 52ccd852d58dddb1e447f4c79858bcc6 926 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 21 39 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 IX88_12240 52ccd852d58dddb1e447f4c79858bcc6 926 PIRSF PIRSF036643 874 926 21.0 T 11-10-2018 IX88_12240 52ccd852d58dddb1e447f4c79858bcc6 926 PIRSF PIRSF036643 5 743 1.8E-153 T 11-10-2018 IX88_12240 52ccd852d58dddb1e447f4c79858bcc6 926 Gene3D G3DSA:1.10.10.1100 869 925 1.9E-5 T 11-10-2018 IX88_12240 52ccd852d58dddb1e447f4c79858bcc6 926 Gene3D G3DSA:3.40.228.10 154 356 6.7E-171 T 11-10-2018 IX88_12240 52ccd852d58dddb1e447f4c79858bcc6 926 SUPERFAMILY SSF53706 17 616 1.7E-183 T 11-10-2018 IX88_12240 52ccd852d58dddb1e447f4c79858bcc6 926 Gene3D G3DSA:2.20.25.90 16 71 7.1E-18 T 11-10-2018 IX88_12240 52ccd852d58dddb1e447f4c79858bcc6 926 Pfam PF01568 Molydopterin dinucleotide binding domain 614 725 1.6E-28 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 IX88_12240 52ccd852d58dddb1e447f4c79858bcc6 926 Gene3D G3DSA:2.40.40.20 611 731 1.8E-38 T 11-10-2018 IX88_12240 52ccd852d58dddb1e447f4c79858bcc6 926 SUPERFAMILY SSF50692 604 745 1.13E-41 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily IX88_12240 52ccd852d58dddb1e447f4c79858bcc6 926 SMART SM00926 16 73 5.8E-20 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_03390 0c2ef8f506c7c3eeeacfef7cbe6db2a9 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 11 511 1.4E-220 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_03390 0c2ef8f506c7c3eeeacfef7cbe6db2a9 515 SUPERFAMILY SSF64158 82 310 4.32E-81 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_03390 0c2ef8f506c7c3eeeacfef7cbe6db2a9 515 SUPERFAMILY SSF53649 11 511 2.09E-70 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 IX88_03390 0c2ef8f506c7c3eeeacfef7cbe6db2a9 515 Pfam PF01676 Metalloenzyme superfamily 11 499 1.6E-77 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 IX88_03390 0c2ef8f506c7c3eeeacfef7cbe6db2a9 515 Gene3D G3DSA:3.40.1450.10 82 312 1.8E-209 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_03390 0c2ef8f506c7c3eeeacfef7cbe6db2a9 515 PIRSF PIRSF001492 4 514 6.4E-198 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_03390 0c2ef8f506c7c3eeeacfef7cbe6db2a9 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 9 512 48.974 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_03390 0c2ef8f506c7c3eeeacfef7cbe6db2a9 515 Gene3D G3DSA:3.40.720.10 10 509 1.8E-209 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 IX88_03390 0c2ef8f506c7c3eeeacfef7cbe6db2a9 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 87 299 2.2E-77 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_15515 16a721fd5ad68aa629df772710c312ad 234 Gene3D G3DSA:1.10.1200.10 163 234 2.6E-10 T 11-10-2018 IPR036736 ACP-like superfamily IX88_17270 1d8df54c74d671da796f34da53199e86 372 Gene3D G3DSA:1.10.287.470 110 176 1.4E-49 T 11-10-2018 IX88_17270 1d8df54c74d671da796f34da53199e86 372 Pfam PF13437 HlyD family secretion protein 183 273 4.2E-18 T 11-10-2018 IX88_17270 1d8df54c74d671da796f34da53199e86 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 350 9.6E-55 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 IX88_17270 1d8df54c74d671da796f34da53199e86 372 SUPERFAMILY SSF111369 61 242 2.88E-21 T 11-10-2018 IX88_17270 1d8df54c74d671da796f34da53199e86 372 Gene3D G3DSA:2.40.420.20 50 350 1.4E-49 T 11-10-2018 IX88_17270 1d8df54c74d671da796f34da53199e86 372 Gene3D G3DSA:2.40.30.170 60 292 1.4E-49 T 11-10-2018 IX88_17270 1d8df54c74d671da796f34da53199e86 372 Pfam PF13533 Biotin-lipoyl like 73 120 1.3E-7 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain IX88_17270 1d8df54c74d671da796f34da53199e86 372 Gene3D G3DSA:2.40.50.100 72 212 1.4E-49 T 11-10-2018 IX88_08825 84819283b14c8de98494f78a29893ac5 564 Pfam PF13193 AMP-binding enzyme C-terminal domain 467 542 5.6E-16 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IX88_08825 84819283b14c8de98494f78a29893ac5 564 SUPERFAMILY SSF56801 16 553 1.27E-154 T 11-10-2018 IX88_08825 84819283b14c8de98494f78a29893ac5 564 Gene3D G3DSA:3.30.300.30 452 557 3.2E-29 T 11-10-2018 IX88_08825 84819283b14c8de98494f78a29893ac5 564 Pfam PF00501 AMP-binding enzyme 26 458 1.6E-110 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IX88_08825 84819283b14c8de98494f78a29893ac5 564 ProSitePatterns PS00455 Putative AMP-binding domain signature. 208 219 - T 11-10-2018 IPR020845 AMP-binding, conserved site IX88_08825 84819283b14c8de98494f78a29893ac5 564 Gene3D G3DSA:3.40.50.12780 6 448 6.2E-123 T 11-10-2018 IX88_07840 33b0c10367cfcea33bb70c5807831de1 426 Pfam PF03573 outer membrane porin, OprD family 23 426 2.3E-105 T 11-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 IX88_07840 33b0c10367cfcea33bb70c5807831de1 426 Gene3D G3DSA:2.40.160.10 25 426 1.4E-150 T 11-10-2018 IPR023614 Porin domain superfamily IX88_04165 a09b464489c6f41b02c24eb8939cdd56 279 SMART SM00116 67 117 0.41 T 11-10-2018 IPR000644 CBS domain IX88_04165 a09b464489c6f41b02c24eb8939cdd56 279 SMART SM00116 131 179 19.0 T 11-10-2018 IPR000644 CBS domain IX88_04165 a09b464489c6f41b02c24eb8939cdd56 279 SUPERFAMILY SSF54631 55 191 5.49E-32 T 11-10-2018 IX88_04165 a09b464489c6f41b02c24eb8939cdd56 279 SUPERFAMILY SSF56176 206 278 3.27E-14 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 IX88_04165 a09b464489c6f41b02c24eb8939cdd56 279 SMART SM01091 201 279 5.9E-12 T 11-10-2018 IPR005170 Transporter-associated domain IX88_04165 a09b464489c6f41b02c24eb8939cdd56 279 Pfam PF03471 Transporter associated domain 206 278 5.5E-15 T 11-10-2018 IPR005170 Transporter-associated domain IX88_04165 a09b464489c6f41b02c24eb8939cdd56 279 Gene3D G3DSA:3.10.580.10 38 190 2.0E-51 T 11-10-2018 IX88_04165 a09b464489c6f41b02c24eb8939cdd56 279 Gene3D G3DSA:3.30.465.10 201 278 7.7E-19 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 IX88_04165 a09b464489c6f41b02c24eb8939cdd56 279 Pfam PF00571 CBS domain 59 116 4.1E-5 T 11-10-2018 IPR000644 CBS domain IX88_04165 a09b464489c6f41b02c24eb8939cdd56 279 Pfam PF00571 CBS domain 126 179 6.9E-7 T 11-10-2018 IPR000644 CBS domain IX88_02590 31423d96fcb2501dc1425157d4cb1f9c 425 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 8 181 1.4E-34 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 IX88_02590 31423d96fcb2501dc1425157d4cb1f9c 425 SUPERFAMILY SSF48179 202 293 3.57E-25 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_02590 31423d96fcb2501dc1425157d4cb1f9c 425 SUPERFAMILY SSF52413 301 418 1.44E-27 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 IX88_02590 31423d96fcb2501dc1425157d4cb1f9c 425 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 318 417 8.2E-22 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 IX88_02590 31423d96fcb2501dc1425157d4cb1f9c 425 PIRSF PIRSF500136 2 425 1.1E-152 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 IX88_02590 31423d96fcb2501dc1425157d4cb1f9c 425 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 8 409 2.3E-123 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 IX88_02590 31423d96fcb2501dc1425157d4cb1f9c 425 Gene3D G3DSA:3.40.50.720 201 423 2.0E-55 T 11-10-2018 IX88_02590 31423d96fcb2501dc1425157d4cb1f9c 425 PIRSF PIRSF000124 7 422 1.6E-58 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 IX88_02590 31423d96fcb2501dc1425157d4cb1f9c 425 SUPERFAMILY SSF51735 9 192 6.61E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_02590 31423d96fcb2501dc1425157d4cb1f9c 425 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 203 291 2.7E-24 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 IX88_02590 31423d96fcb2501dc1425157d4cb1f9c 425 SMART SM00984 318 418 1.7E-32 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 IX88_02590 31423d96fcb2501dc1425157d4cb1f9c 425 Gene3D G3DSA:3.40.50.720 3 198 6.0E-60 T 11-10-2018 IX88_03090 bad7800262957cad78b03e5a6f8750a2 254 SMART SM00342 170 252 7.4E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_03090 bad7800262957cad78b03e5a6f8750a2 254 Pfam PF12833 Helix-turn-helix domain 178 253 1.6E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_03090 bad7800262957cad78b03e5a6f8750a2 254 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 207 248 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 IX88_03090 bad7800262957cad78b03e5a6f8750a2 254 Gene3D G3DSA:1.10.10.60 156 254 1.6E-18 T 11-10-2018 IX88_03090 bad7800262957cad78b03e5a6f8750a2 254 SUPERFAMILY SSF51182 13 173 3.02E-7 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_03090 bad7800262957cad78b03e5a6f8750a2 254 SUPERFAMILY SSF46689 207 254 2.15E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_16950 df837255551e87890e1c6bdb6665a035 208 SMART SM00563 46 158 3.7E-18 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 IX88_16950 df837255551e87890e1c6bdb6665a035 208 Pfam PF01553 Acyltransferase 46 151 2.2E-8 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 IX88_16950 df837255551e87890e1c6bdb6665a035 208 SUPERFAMILY SSF69593 19 157 9.29E-19 T 11-10-2018 IX88_17965 a92175a054111892602578da915aa05c 646 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IX88_17965 a92175a054111892602578da915aa05c 646 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 7.6E-45 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IX88_17965 a92175a054111892602578da915aa05c 646 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IX88_17965 a92175a054111892602578da915aa05c 646 SUPERFAMILY SSF52440 2 114 8.63E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily IX88_17965 a92175a054111892602578da915aa05c 646 SUPERFAMILY SSF51230 570 644 2.88E-19 T 11-10-2018 IPR011053 Single hybrid motif IX88_17965 a92175a054111892602578da915aa05c 646 Gene3D G3DSA:3.30.470.130 1 448 1.3E-192 T 11-10-2018 IX88_17965 a92175a054111892602578da915aa05c 646 Pfam PF02785 Biotin carboxylase C-terminal domain 337 443 4.1E-31 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IX88_17965 a92175a054111892602578da915aa05c 646 SMART SM00878 337 443 9.1E-47 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IX88_17965 a92175a054111892602578da915aa05c 646 Pfam PF00364 Biotin-requiring enzyme 578 644 1.5E-15 T 11-10-2018 IPR000089 Biotin/lipoyl attachment IX88_17965 a92175a054111892602578da915aa05c 646 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 323 4.9E-74 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IX88_17965 a92175a054111892602578da915aa05c 646 SUPERFAMILY SSF51246 332 447 1.67E-35 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 IX88_17965 a92175a054111892602578da915aa05c 646 Gene3D G3DSA:2.40.50.100 570 645 1.6E-22 T 11-10-2018 IX88_17965 a92175a054111892602578da915aa05c 646 SUPERFAMILY SSF56059 84 349 1.08E-63 T 11-10-2018 IX88_17965 a92175a054111892602578da915aa05c 646 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 595 624 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 IX88_00795 e336df17942018f1f0eb079b322e400d 502 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_00795 e336df17942018f1f0eb079b322e400d 502 Gene3D G3DSA:3.40.50.620 1 327 4.2E-152 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_00795 e336df17942018f1f0eb079b322e400d 502 SUPERFAMILY SSF48163 313 471 2.35E-34 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 IX88_00795 e336df17942018f1f0eb079b322e400d 502 Gene3D G3DSA:1.10.10.350 370 493 1.1E-29 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 IX88_00795 e336df17942018f1f0eb079b322e400d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 216 1.2E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IX88_00795 e336df17942018f1f0eb079b322e400d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 202 1.2E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IX88_00795 e336df17942018f1f0eb079b322e400d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.2E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IX88_00795 e336df17942018f1f0eb079b322e400d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.2E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IX88_00795 e336df17942018f1f0eb079b322e400d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.2E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IX88_00795 e336df17942018f1f0eb079b322e400d 502 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 468 4.9E-143 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 IX88_00795 e336df17942018f1f0eb079b322e400d 502 SUPERFAMILY SSF52374 2 307 9.92E-114 T 11-10-2018 IX88_00795 e336df17942018f1f0eb079b322e400d 502 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 319 8.7E-114 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 IX88_00795 e336df17942018f1f0eb079b322e400d 502 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 470 30.563 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 IX88_13235 0edfb017b444d67ecf227f92ae328a3f 201 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 13 197 31.605 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 IX88_13235 0edfb017b444d67ecf227f92ae328a3f 201 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 15 197 4.3E-58 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 IX88_13235 0edfb017b444d67ecf227f92ae328a3f 201 Pfam PF02669 K+-transporting ATPase, c chain 17 196 4.4E-66 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 IX88_13235 0edfb017b444d67ecf227f92ae328a3f 201 PIRSF PIRSF001296 12 201 5.3E-69 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 IX88_05245 f176344fd7fa5cf70b22fe7295916850 273 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 8 266 2.3E-113 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IX88_05245 f176344fd7fa5cf70b22fe7295916850 273 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 1 267 38.446 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IX88_05245 f176344fd7fa5cf70b22fe7295916850 273 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 100 2.2E-44 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IX88_05245 f176344fd7fa5cf70b22fe7295916850 273 Gene3D G3DSA:3.90.226.10 1 267 2.8E-93 T 11-10-2018 IX88_05245 f176344fd7fa5cf70b22fe7295916850 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 105 118 2.0E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IX88_05245 f176344fd7fa5cf70b22fe7295916850 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 86 102 2.0E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IX88_05245 f176344fd7fa5cf70b22fe7295916850 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 40 51 2.0E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IX88_05245 f176344fd7fa5cf70b22fe7295916850 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 149 158 2.0E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IX88_05245 f176344fd7fa5cf70b22fe7295916850 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 65 83 2.0E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IX88_05245 f176344fd7fa5cf70b22fe7295916850 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 121 134 2.0E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IX88_05245 f176344fd7fa5cf70b22fe7295916850 273 SUPERFAMILY SSF52096 8 265 4.55E-83 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_02295 379c54a0b15dd5558443f997247850d4 457 Pfam PF08245 Mur ligase middle domain 108 295 5.8E-23 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 IX88_02295 379c54a0b15dd5558443f997247850d4 457 SUPERFAMILY SSF53623 97 312 7.98E-53 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IX88_02295 379c54a0b15dd5558443f997247850d4 457 SUPERFAMILY SSF53244 314 452 4.58E-40 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IX88_02295 379c54a0b15dd5558443f997247850d4 457 Gene3D G3DSA:3.90.190.20 318 454 5.2E-32 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IX88_02295 379c54a0b15dd5558443f997247850d4 457 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 453 4.6E-209 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 IX88_02295 379c54a0b15dd5558443f997247850d4 457 Pfam PF01225 Mur ligase family, catalytic domain 2 99 1.2E-16 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 IX88_02295 379c54a0b15dd5558443f997247850d4 457 SUPERFAMILY SSF51984 1 90 2.22E-21 T 11-10-2018 IX88_02295 379c54a0b15dd5558443f997247850d4 457 Gene3D G3DSA:3.40.50.720 1 90 6.1E-34 T 11-10-2018 IX88_02295 379c54a0b15dd5558443f997247850d4 457 Gene3D G3DSA:3.40.1190.10 91 317 2.3E-58 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IX88_02295 379c54a0b15dd5558443f997247850d4 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 363 5.6E-11 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 IX88_02295 379c54a0b15dd5558443f997247850d4 457 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 453 58.162 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 IX88_09680 c8979942bf50de1a1536b0affa386126 341 SMART SM00342 254 336 1.2E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_09680 c8979942bf50de1a1536b0affa386126 341 Gene3D G3DSA:1.10.10.60 235 339 1.5E-27 T 11-10-2018 IX88_09680 c8979942bf50de1a1536b0affa386126 341 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 207 3.5E-23 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal IX88_09680 c8979942bf50de1a1536b0affa386126 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 305 320 2.2E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_09680 c8979942bf50de1a1536b0affa386126 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 320 336 2.2E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_09680 c8979942bf50de1a1536b0affa386126 341 Pfam PF12833 Helix-turn-helix domain 261 337 3.4E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_09680 c8979942bf50de1a1536b0affa386126 341 SUPERFAMILY SSF46689 289 338 1.79E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_15180 707ed6b45689ec644b118e0b8d0dbc09 536 SUPERFAMILY SSF52540 327 528 4.41E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_15180 707ed6b45689ec644b118e0b8d0dbc09 536 ProSitePatterns PS00211 ABC transporters family signature. 454 468 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_15180 707ed6b45689ec644b118e0b8d0dbc09 536 Pfam PF00005 ABC transporter 344 482 9.5E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_15180 707ed6b45689ec644b118e0b8d0dbc09 536 Gene3D G3DSA:3.40.50.300 320 534 1.9E-51 T 11-10-2018 IX88_15180 707ed6b45689ec644b118e0b8d0dbc09 536 SUPERFAMILY SSF90123 15 313 7.59E-28 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IX88_15180 707ed6b45689ec644b118e0b8d0dbc09 536 SMART SM00382 353 530 1.7E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_15180 707ed6b45689ec644b118e0b8d0dbc09 536 Gene3D G3DSA:1.20.1560.10 13 313 4.5E-21 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IX88_15180 707ed6b45689ec644b118e0b8d0dbc09 536 Pfam PF00664 ABC transporter transmembrane region 18 271 1.1E-9 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 IX88_11515 5fe1acd097b96cdbd16b33b5b3f28425 449 Gene3D G3DSA:1.20.1250.20 241 438 5.1E-21 T 11-10-2018 IX88_11515 5fe1acd097b96cdbd16b33b5b3f28425 449 SUPERFAMILY SSF103473 11 431 3.4E-63 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_11515 5fe1acd097b96cdbd16b33b5b3f28425 449 Gene3D G3DSA:1.20.1250.20 11 221 6.4E-43 T 11-10-2018 IX88_11515 5fe1acd097b96cdbd16b33b5b3f28425 449 Pfam PF07690 Major Facilitator Superfamily 27 391 2.3E-42 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_03835 090731406127f7826fe40968af9a30d9 304 Gene3D G3DSA:2.60.120.330 44 229 1.7E-43 T 11-10-2018 IPR027443 Isopenicillin N synthase-like IX88_03835 090731406127f7826fe40968af9a30d9 304 SUPERFAMILY SSF51197 100 224 3.84E-17 T 11-10-2018 IX88_03835 090731406127f7826fe40968af9a30d9 304 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 70 223 1.4E-47 T 11-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 IX88_02570 2cb69dc1d626a0ee630f742d86e77daf 240 Gene3D G3DSA:3.10.50.40 132 238 4.0E-45 T 11-10-2018 IX88_02570 2cb69dc1d626a0ee630f742d86e77daf 240 SUPERFAMILY SSF54534 43 240 4.44E-57 T 11-10-2018 IX88_02570 2cb69dc1d626a0ee630f742d86e77daf 240 Gene3D G3DSA:1.10.287.460 26 131 3.1E-19 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 IX88_02570 2cb69dc1d626a0ee630f742d86e77daf 240 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 36 142 7.7E-22 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 IX88_02570 2cb69dc1d626a0ee630f742d86e77daf 240 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 150 237 1.1E-30 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain IX88_06235 4b9804b88291b0025f0261d0f6ca81e6 370 SUPERFAMILY SSF53659 3 357 1.73E-113 T 11-10-2018 IX88_06235 4b9804b88291b0025f0261d0f6ca81e6 370 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 IX88_06235 4b9804b88291b0025f0261d0f6ca81e6 370 Gene3D G3DSA:3.40.718.10 1 363 1.9E-141 T 11-10-2018 IX88_06235 4b9804b88291b0025f0261d0f6ca81e6 370 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 5.4E-84 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 IX88_06235 4b9804b88291b0025f0261d0f6ca81e6 370 SMART SM01329 6 355 5.7E-171 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 IX88_06235 4b9804b88291b0025f0261d0f6ca81e6 370 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 3 358 1.4E-168 T 11-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 IX88_13115 5aff3b99089c1677049856f831360185 650 SUPERFAMILY SSF118116 457 648 8.24E-57 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily IX88_13115 5aff3b99089c1677049856f831360185 650 Gene3D G3DSA:2.30.42.20 464 643 6.3E-53 T 11-10-2018 IX88_13115 5aff3b99089c1677049856f831360185 650 Pfam PF08676 MutL C terminal dimerisation domain 458 606 3.6E-44 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 IX88_13115 5aff3b99089c1677049856f831360185 650 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 149 2.1E-11 T 11-10-2018 IX88_13115 5aff3b99089c1677049856f831360185 650 SUPERFAMILY SSF54211 202 339 1.14E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_13115 5aff3b99089c1677049856f831360185 650 Gene3D G3DSA:3.30.230.10 226 338 9.0E-36 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IX88_13115 5aff3b99089c1677049856f831360185 650 Gene3D G3DSA:3.30.565.10 10 224 3.3E-65 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_13115 5aff3b99089c1677049856f831360185 650 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 9 646 26.779 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 IX88_13115 5aff3b99089c1677049856f831360185 650 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 10 319 1.6E-95 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 IX88_13115 5aff3b99089c1677049856f831360185 650 SMART SM00853 462 606 6.1E-46 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 IX88_13115 5aff3b99089c1677049856f831360185 650 Gene3D G3DSA:3.30.1370.100 506 601 6.3E-53 T 11-10-2018 IX88_13115 5aff3b99089c1677049856f831360185 650 SMART SM01340 221 339 7.0E-52 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 IX88_13115 5aff3b99089c1677049856f831360185 650 SUPERFAMILY SSF55874 8 211 2.1E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_13115 5aff3b99089c1677049856f831360185 650 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 222 338 4.6E-36 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 IX88_13115 5aff3b99089c1677049856f831360185 650 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 101 107 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site IX88_14425 85c035b5a04869b852e62532a925b5de 299 Gene3D G3DSA:3.20.20.70 152 299 2.9E-27 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_14425 85c035b5a04869b852e62532a925b5de 299 PRINTS PR00502 NUDIX hydrolase family signature 34 48 4.7E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 IX88_14425 85c035b5a04869b852e62532a925b5de 299 PRINTS PR00502 NUDIX hydrolase family signature 48 63 4.7E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 IX88_14425 85c035b5a04869b852e62532a925b5de 299 Pfam PF02581 Thiamine monophosphate synthase 160 298 3.9E-18 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 IX88_14425 85c035b5a04869b852e62532a925b5de 299 SUPERFAMILY SSF55811 3 126 4.2E-29 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 IX88_14425 85c035b5a04869b852e62532a925b5de 299 Gene3D G3DSA:3.90.79.10 3 128 9.7E-28 T 11-10-2018 IX88_14425 85c035b5a04869b852e62532a925b5de 299 Pfam PF00293 NUDIX domain 8 125 5.8E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 IX88_14425 85c035b5a04869b852e62532a925b5de 299 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 IX88_14425 85c035b5a04869b852e62532a925b5de 299 SUPERFAMILY SSF51391 147 298 3.92E-23 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 IX88_02490 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 SUPERFAMILY SSF51735 12 244 1.19E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_02490 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 Pfam PF00106 short chain dehydrogenase 17 212 1.4E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_02490 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 4.5E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_02490 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 4.5E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_02490 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.5E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_02490 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 4.5E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_02490 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 4.5E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_02490 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 4.5E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_02490 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_02490 6c15f3ba3f8c3955b9a4302fcc7e2fd3 248 Gene3D G3DSA:3.40.50.720 3 248 3.8E-66 T 11-10-2018 IX88_17620 f1f1fd0cb16a5677d5a1f29dcad9c7a8 127 Gene3D G3DSA:3.10.450.160 59 126 2.4E-16 T 11-10-2018 IX88_17620 f1f1fd0cb16a5677d5a1f29dcad9c7a8 127 Pfam PF11776 Nickel/cobalt transporter regulator 76 120 8.4E-19 T 11-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB IX88_17620 f1f1fd0cb16a5677d5a1f29dcad9c7a8 127 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 72 117 8.0E-12 T 11-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB IX88_05105 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 4.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05105 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 4.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05105 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 4.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05105 97952a47ae23f1e324a4c224acacc9a1 257 SUPERFAMILY SSF51735 5 234 1.25E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_05105 97952a47ae23f1e324a4c224acacc9a1 257 Gene3D G3DSA:3.40.50.720 2 230 7.3E-58 T 11-10-2018 IX88_05105 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 5.1E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05105 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 5.1E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05105 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 5.1E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05105 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 5.1E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05105 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.1E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05105 97952a47ae23f1e324a4c224acacc9a1 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 5.1E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05105 97952a47ae23f1e324a4c224acacc9a1 257 Pfam PF00106 short chain dehydrogenase 5 190 1.7E-47 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_04350 17001696f576915c17368588f55be348 161 Pfam PF00293 NUDIX domain 7 145 4.9E-26 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 IX88_04350 17001696f576915c17368588f55be348 161 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 IX88_04350 17001696f576915c17368588f55be348 161 Gene3D G3DSA:3.90.79.10 1 155 3.1E-46 T 11-10-2018 IX88_04350 17001696f576915c17368588f55be348 161 SUPERFAMILY SSF55811 7 155 8.12E-33 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 IX88_04350 17001696f576915c17368588f55be348 161 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.5E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 IX88_04350 17001696f576915c17368588f55be348 161 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.5E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 IX88_04350 17001696f576915c17368588f55be348 161 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 36.3 T 11-10-2018 IPR022927 RNA pyrophosphohydrolase RppH IX88_16200 e05894b998015b6822938315e6bd4830 462 SMART SM00382 91 246 6.0E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_16200 e05894b998015b6822938315e6bd4830 462 Hamap MF_01498 DNA repair protein RadA [radA]. 21 455 42.661 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 IX88_16200 e05894b998015b6822938315e6bd4830 462 SUPERFAMILY SSF54211 256 454 8.72E-39 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_16200 e05894b998015b6822938315e6bd4830 462 Gene3D G3DSA:3.30.230.10 319 458 3.5E-17 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IX88_16200 e05894b998015b6822938315e6bd4830 462 PRINTS PR01874 DNA repair protein radA signature 125 142 5.2E-91 T 11-10-2018 IX88_16200 e05894b998015b6822938315e6bd4830 462 PRINTS PR01874 DNA repair protein radA signature 249 275 5.2E-91 T 11-10-2018 IX88_16200 e05894b998015b6822938315e6bd4830 462 PRINTS PR01874 DNA repair protein radA signature 214 242 5.2E-91 T 11-10-2018 IX88_16200 e05894b998015b6822938315e6bd4830 462 PRINTS PR01874 DNA repair protein radA signature 322 345 5.2E-91 T 11-10-2018 IX88_16200 e05894b998015b6822938315e6bd4830 462 PRINTS PR01874 DNA repair protein radA signature 10 34 5.2E-91 T 11-10-2018 IX88_16200 e05894b998015b6822938315e6bd4830 462 PRINTS PR01874 DNA repair protein radA signature 175 199 5.2E-91 T 11-10-2018 IX88_16200 e05894b998015b6822938315e6bd4830 462 PRINTS PR01874 DNA repair protein radA signature 83 111 5.2E-91 T 11-10-2018 IX88_16200 e05894b998015b6822938315e6bd4830 462 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 430 7.8E-7 T 11-10-2018 IX88_16200 e05894b998015b6822938315e6bd4830 462 Pfam PF06745 KaiC 75 150 4.3E-11 T 11-10-2018 IPR014774 KaiC-like domain IX88_16200 e05894b998015b6822938315e6bd4830 462 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 451 6.9E-191 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 IX88_16200 e05894b998015b6822938315e6bd4830 462 Gene3D G3DSA:3.40.50.300 60 275 2.1E-40 T 11-10-2018 IX88_16200 e05894b998015b6822938315e6bd4830 462 SUPERFAMILY SSF52540 70 288 3.73E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 Hamap MF_00098 Methionine--tRNA ligase [metG]. 2 544 39.022 T 11-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 SUPERFAMILY SSF52374 3 385 2.56E-98 T 11-10-2018 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 Pfam PF08264 Anticodon-binding domain of tRNA 425 501 1.0E-5 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 Gene3D G3DSA:1.10.730.10 378 534 1.0E-34 T 11-10-2018 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 Gene3D G3DSA:2.40.50.140 578 687 2.4E-32 T 11-10-2018 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 SUPERFAMILY SSF50249 585 686 7.59E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 248 259 7.9E-24 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 7.9E-24 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 38 52 7.9E-24 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 7.9E-24 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 86 97 7.9E-24 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 PRINTS PR01041 Methionyl-tRNA synthetase signature 382 393 7.9E-24 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 SUPERFAMILY SSF57770 138 172 3.01E-12 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 SUPERFAMILY SSF47323 388 546 1.78E-41 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 4 533 2.5E-170 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 Pfam PF09334 tRNA synthetases class I (M) 4 394 2.3E-150 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 Gene3D G3DSA:2.20.28.20 138 172 4.0E-148 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 Pfam PF01588 Putative tRNA binding domain 592 685 6.7E-24 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 559 686 6.6E-42 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 IX88_05885 600d71963f9c475a4b38d6c7f4449580 687 Gene3D G3DSA:3.40.50.620 4 377 4.0E-148 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_10870 0808f7bf760a4ea340821e3421d87c4a 411 Pfam PF05155 Phage X family 312 400 2.1E-15 T 11-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 IX88_10870 0808f7bf760a4ea340821e3421d87c4a 411 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 33 404 2.5E-80 T 11-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 IX88_10870 0808f7bf760a4ea340821e3421d87c4a 411 Pfam PF05144 Phage replication protein CRI 1 266 3.2E-56 T 11-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 IX88_10915 0808f7bf760a4ea340821e3421d87c4a 411 Pfam PF05155 Phage X family 312 400 2.1E-15 T 11-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 IX88_10915 0808f7bf760a4ea340821e3421d87c4a 411 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 33 404 2.5E-80 T 11-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 IX88_10915 0808f7bf760a4ea340821e3421d87c4a 411 Pfam PF05144 Phage replication protein CRI 1 266 3.2E-56 T 11-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 IX88_13490 ba551b6855455c06a4b4ca43d2f637e7 428 Gene3D G3DSA:3.90.600.10 329 428 7.5E-33 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 IX88_13490 ba551b6855455c06a4b4ca43d2f637e7 428 SMART SM01209 103 296 2.6E-140 T 11-10-2018 IX88_13490 ba551b6855455c06a4b4ca43d2f637e7 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 2.8E-85 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 IX88_13490 ba551b6855455c06a4b4ca43d2f637e7 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 8.7E-35 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 IX88_13490 ba551b6855455c06a4b4ca43d2f637e7 428 SUPERFAMILY SSF56059 104 321 3.89E-66 T 11-10-2018 IX88_13490 ba551b6855455c06a4b4ca43d2f637e7 428 Gene3D G3DSA:3.30.1490.20 122 190 2.9E-28 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 IX88_13490 ba551b6855455c06a4b4ca43d2f637e7 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 IX88_13490 ba551b6855455c06a4b4ca43d2f637e7 428 SUPERFAMILY SSF51246 328 423 1.65E-29 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 IX88_13490 ba551b6855455c06a4b4ca43d2f637e7 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 420 5.8E-27 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 IX88_13490 ba551b6855455c06a4b4ca43d2f637e7 428 Gene3D G3DSA:3.30.470.20 191 328 9.1E-58 T 11-10-2018 IX88_13490 ba551b6855455c06a4b4ca43d2f637e7 428 SMART SM01210 329 422 6.0E-47 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 IX88_13490 ba551b6855455c06a4b4ca43d2f637e7 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 422 1.1E-175 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 IX88_13490 ba551b6855455c06a4b4ca43d2f637e7 428 Gene3D G3DSA:3.40.50.20 2 95 7.6E-36 T 11-10-2018 IX88_13490 ba551b6855455c06a4b4ca43d2f637e7 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 42.95 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 IX88_13490 ba551b6855455c06a4b4ca43d2f637e7 428 SUPERFAMILY SSF52440 1 103 4.75E-36 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily IX88_16235 88f66e6a1008434bc5ef6f6624eacab0 385 SUPERFAMILY SSF110738 1 375 2.48E-133 T 11-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 IX88_16235 88f66e6a1008434bc5ef6f6624eacab0 385 Pfam PF02595 Glycerate kinase family 3 374 6.3E-144 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 IX88_16235 88f66e6a1008434bc5ef6f6624eacab0 385 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 2.5E-146 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 IX88_16235 88f66e6a1008434bc5ef6f6624eacab0 385 PIRSF PIRSF006078 1 377 3.1E-135 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 IX88_16235 88f66e6a1008434bc5ef6f6624eacab0 385 Gene3D G3DSA:3.40.50.10350 1 362 1.2E-139 T 11-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold IX88_16235 88f66e6a1008434bc5ef6f6624eacab0 385 Gene3D G3DSA:3.90.1510.10 42 276 1.2E-139 T 11-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 SUPERFAMILY SSF53732 9 592 7.98E-186 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 Gene3D G3DSA:3.30.499.10 361 562 5.2E-76 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 PRINTS PR00415 Aconitase family signature 162 170 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 PRINTS PR00415 Aconitase family signature 281 294 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 PRINTS PR00415 Aconitase family signature 205 220 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 PRINTS PR00415 Aconitase family signature 403 414 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 PRINTS PR00415 Aconitase family signature 267 280 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 PRINTS PR00415 Aconitase family signature 191 204 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 PRINTS PR00415 Aconitase family signature 360 374 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 PRINTS PR00415 Aconitase family signature 465 478 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 PRINTS PR00415 Aconitase family signature 138 151 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 Gene3D G3DSA:3.20.19.10 619 863 4.0E-84 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 Pfam PF00330 Aconitase family (aconitate hydratase) 70 534 1.6E-144 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 864 0.0 T 11-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 Gene3D G3DSA:3.30.499.20 4 360 1.9E-129 T 11-10-2018 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 Gene3D G3DSA:1.10.1440.20 563 618 4.0E-9 T 11-10-2018 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 Pfam PF00694 Aconitase C-terminal domain 657 788 5.0E-31 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 IX88_02700 5a645adffa2b62d5fbe2b133be7b6b90 868 SUPERFAMILY SSF52016 599 862 7.65E-68 T 11-10-2018 IX88_10160 08dafda582e6d4fc87558944c9c6eace 636 Pfam PF06276 Ferric iron reductase FhuF-like transporter 465 611 4.7E-15 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain IX88_10160 08dafda582e6d4fc87558944c9c6eace 636 Pfam PF04183 IucA / IucC family 171 421 1.0E-47 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 IX88_10160 08dafda582e6d4fc87558944c9c6eace 636 Gene3D G3DSA:1.10.510.40 455 626 4.5E-8 T 11-10-2018 IX88_10970 f1f9f14f9c331d4734a7515c69107ee3 304 SUPERFAMILY SSF53474 12 300 8.99E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_10970 f1f9f14f9c331d4734a7515c69107ee3 304 Gene3D G3DSA:1.10.10.800 147 230 7.3E-53 T 11-10-2018 IX88_10970 f1f9f14f9c331d4734a7515c69107ee3 304 Pfam PF12146 Serine aminopeptidase, S33 38 276 2.7E-14 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 IX88_10970 f1f9f14f9c331d4734a7515c69107ee3 304 Gene3D G3DSA:3.40.50.1820 17 281 7.3E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_11465 5857cdcea729bda6a7b8d0d3a21902ef 317 Pfam PF00175 Oxidoreductase NAD-binding domain 111 201 2.0E-4 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 IX88_11465 5857cdcea729bda6a7b8d0d3a21902ef 317 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 266 274 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 IX88_11465 5857cdcea729bda6a7b8d0d3a21902ef 317 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 239 307 3.6E-13 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 IX88_11465 5857cdcea729bda6a7b8d0d3a21902ef 317 SUPERFAMILY SSF63380 3 99 4.66E-22 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel IX88_11465 5857cdcea729bda6a7b8d0d3a21902ef 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 75 89 7.9E-35 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_11465 5857cdcea729bda6a7b8d0d3a21902ef 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 110 129 7.9E-35 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_11465 5857cdcea729bda6a7b8d0d3a21902ef 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 39 51 7.9E-35 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_11465 5857cdcea729bda6a7b8d0d3a21902ef 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 189 197 7.9E-35 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_11465 5857cdcea729bda6a7b8d0d3a21902ef 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 29 39 7.9E-35 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_11465 5857cdcea729bda6a7b8d0d3a21902ef 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 135 144 7.9E-35 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_11465 5857cdcea729bda6a7b8d0d3a21902ef 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 51 65 7.9E-35 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_11465 5857cdcea729bda6a7b8d0d3a21902ef 317 SUPERFAMILY SSF52343 97 224 9.69E-25 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_11465 5857cdcea729bda6a7b8d0d3a21902ef 317 SUPERFAMILY SSF54292 211 315 8.13E-28 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 IX88_11465 5857cdcea729bda6a7b8d0d3a21902ef 317 Gene3D G3DSA:3.40.50.80 104 221 1.9E-22 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_11465 5857cdcea729bda6a7b8d0d3a21902ef 317 Pfam PF00970 Oxidoreductase FAD-binding domain 8 98 1.1E-5 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 IX88_11465 5857cdcea729bda6a7b8d0d3a21902ef 317 Gene3D G3DSA:3.10.20.30 222 317 1.1E-24 T 11-10-2018 IPR012675 Beta-grasp domain superfamily IX88_11465 5857cdcea729bda6a7b8d0d3a21902ef 317 Gene3D G3DSA:2.40.30.10 1 100 1.2E-23 T 11-10-2018 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 Gene3D G3DSA:3.40.50.620 38 582 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 10 874 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 635 675 5.8E-7 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 432 588 8.1E-8 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 Gene3D G3DSA:3.10.330.110 583 645 0.0 T 11-10-2018 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 Gene3D G3DSA:3.90.740.10 233 428 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 Gene3D G3DSA:3.10.20.590 815 874 2.7E-19 T 11-10-2018 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 132 149 1.3E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 540 562 1.3E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 501 519 1.3E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 158 174 1.3E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 190 203 1.3E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 573 583 1.3E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 221 240 1.3E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 Gene3D G3DSA:1.10.730.10 14 807 0.0 T 11-10-2018 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 9 874 22.963 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 58 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 SUPERFAMILY SSF47323 679 874 7.66E-27 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 SUPERFAMILY SSF50677 232 428 5.76E-52 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 Pfam PF09334 tRNA synthetases class I (M) 41 177 3.7E-19 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 SUPERFAMILY SSF52374 10 685 6.26E-144 T 11-10-2018 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 227 417 3.1E-73 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 IX88_04900 c82ad306d82c05db2297a5e86ee593bc 874 Pfam PF08264 Anticodon-binding domain of tRNA 718 835 1.1E-13 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 PIRSF PIRSF001174 6 789 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 SMART SM00464 19 214 2.9E-62 T 11-10-2018 IPR003111 Lon, substrate-binding domain IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 TIGRFAM TIGR00763 lon: endopeptidase La 21 784 4.2E-281 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 Gene3D G3DSA:3.40.50.300 326 503 6.3E-63 T 11-10-2018 IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 Gene3D G3DSA:1.10.8.60 504 598 5.2E-32 T 11-10-2018 IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 584 786 1.1E-84 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 Hamap MF_01973 Lon protease [lon]. 20 786 67.225 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 717 736 7.9E-50 T 11-10-2018 IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 687 706 7.9E-50 T 11-10-2018 IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 369 388 7.9E-50 T 11-10-2018 IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 609 625 7.9E-50 T 11-10-2018 IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 740 758 7.9E-50 T 11-10-2018 IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 Gene3D G3DSA:3.30.230.10 599 786 2.0E-74 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 SMART SM00382 361 505 2.9E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 Gene3D G3DSA:2.30.130.40 13 127 3.0E-28 T 11-10-2018 IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 SUPERFAMILY SSF54211 609 784 1.78E-54 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 SUPERFAMILY SSF52540 327 598 1.47E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 SUPERFAMILY SSF88697 19 212 1.07E-29 T 11-10-2018 IPR015947 PUA-like superfamily IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 365 501 6.0E-20 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 690 698 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 19 212 2.2E-29 T 11-10-2018 IPR003111 Lon, substrate-binding domain IX88_07175 de6f3cda393f9e28d421ebc389dd79f9 809 Gene3D G3DSA:1.20.58.1480 132 256 1.4E-23 T 11-10-2018 IX88_12320 295609d94fa28b341f6e554bf0bab161 164 Pfam PF00717 Peptidase S24-like 78 144 4.1E-14 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C IX88_12320 295609d94fa28b341f6e554bf0bab161 164 Gene3D G3DSA:2.10.109.10 48 163 8.9E-43 T 11-10-2018 IX88_12320 295609d94fa28b341f6e554bf0bab161 164 SUPERFAMILY SSF51306 37 159 3.66E-31 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily IX88_08335 892049fee891372b16038e5a48323d9f 248 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 11 247 4.0E-120 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 IX88_08335 892049fee891372b16038e5a48323d9f 248 Gene3D G3DSA:3.40.50.300 9 248 2.5E-69 T 11-10-2018 IX88_08335 892049fee891372b16038e5a48323d9f 248 Pfam PF00005 ABC transporter 26 173 3.1E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_08335 892049fee891372b16038e5a48323d9f 248 SMART SM00382 35 220 3.7E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_08335 892049fee891372b16038e5a48323d9f 248 SUPERFAMILY SSF52540 11 244 3.59E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_08335 892049fee891372b16038e5a48323d9f 248 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 222 243 5.7E-10 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal IX88_08335 892049fee891372b16038e5a48323d9f 248 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_09925 f3caf10b5b1195b13396ad5ebc006f9f 137 Gene3D G3DSA:3.30.420.270 64 133 3.5E-8 T 11-10-2018 IX88_09925 f3caf10b5b1195b13396ad5ebc006f9f 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 135 3.5E-23 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 IX88_08010 a2d25916557718d595206a8bdb62de96 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 706 720 5.7E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 IX88_08010 a2d25916557718d595206a8bdb62de96 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 644 662 5.7E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 IX88_08010 a2d25916557718d595206a8bdb62de96 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 5.7E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 IX88_08010 a2d25916557718d595206a8bdb62de96 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 617 5.7E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 IX88_08010 a2d25916557718d595206a8bdb62de96 859 SMART SM00382 195 340 5.9E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_08010 a2d25916557718d595206a8bdb62de96 859 SMART SM00382 595 745 4.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_08010 a2d25916557718d595206a8bdb62de96 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 594 757 6.2E-56 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IX88_08010 a2d25916557718d595206a8bdb62de96 859 Gene3D G3DSA:1.10.8.60 764 857 2.7E-27 T 11-10-2018 IX88_08010 a2d25916557718d595206a8bdb62de96 859 SUPERFAMILY SSF52540 544 851 3.61E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_08010 a2d25916557718d595206a8bdb62de96 859 Gene3D G3DSA:3.40.50.300 145 339 2.4E-74 T 11-10-2018 IX88_08010 a2d25916557718d595206a8bdb62de96 859 SMART SM01086 764 853 4.1E-36 T 11-10-2018 IPR019489 Clp ATPase, C-terminal IX88_08010 a2d25916557718d595206a8bdb62de96 859 Gene3D G3DSA:1.10.1780.10 1 144 9.3E-29 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 IX88_08010 a2d25916557718d595206a8bdb62de96 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 92 142 6.1E-11 T 11-10-2018 IPR004176 Clp, N-terminal IX88_08010 a2d25916557718d595206a8bdb62de96 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 66 7.7E-5 T 11-10-2018 IPR004176 Clp, N-terminal IX88_08010 a2d25916557718d595206a8bdb62de96 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 764 843 1.2E-25 T 11-10-2018 IPR019489 Clp ATPase, C-terminal IX88_08010 a2d25916557718d595206a8bdb62de96 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 291 303 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 IX88_08010 a2d25916557718d595206a8bdb62de96 859 SUPERFAMILY SSF81923 4 153 8.04E-35 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 IX88_08010 a2d25916557718d595206a8bdb62de96 859 SUPERFAMILY SSF52540 157 543 7.56E-98 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_08010 a2d25916557718d595206a8bdb62de96 859 Gene3D G3DSA:3.40.50.300 340 542 9.9E-66 T 11-10-2018 IX88_08010 a2d25916557718d595206a8bdb62de96 859 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 IX88_08010 a2d25916557718d595206a8bdb62de96 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 629 647 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 IX88_08010 a2d25916557718d595206a8bdb62de96 859 Gene3D G3DSA:3.40.50.300 548 762 8.8E-89 T 11-10-2018 IX88_08010 a2d25916557718d595206a8bdb62de96 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 200 331 1.8E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IX88_12800 0eaa2d63f70d87bd9151b1bc8f1f6a09 284 SUPERFAMILY SSF54637 33 154 9.7E-7 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_12800 0eaa2d63f70d87bd9151b1bc8f1f6a09 284 SUPERFAMILY SSF54637 177 282 2.32E-16 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_12800 0eaa2d63f70d87bd9151b1bc8f1f6a09 284 Pfam PF01575 MaoC like domain 177 231 8.3E-12 T 11-10-2018 IPR002539 MaoC-like dehydratase domain IX88_12800 0eaa2d63f70d87bd9151b1bc8f1f6a09 284 Gene3D G3DSA:3.10.129.10 34 284 1.0E-64 T 11-10-2018 IX88_09930 0cb528055a4bdac72d5baef6139f7a2b 140 Gene3D G3DSA:3.30.420.270 63 132 4.8E-10 T 11-10-2018 IX88_09930 0cb528055a4bdac72d5baef6139f7a2b 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 136 6.0E-29 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 IX88_04085 6a4e6318245426316148c5a14c496dfb 583 Gene3D G3DSA:2.30.30.940 438 507 6.9E-85 T 11-10-2018 IX88_04085 6a4e6318245426316148c5a14c496dfb 583 SMART SM00382 138 305 0.0074 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_04085 6a4e6318245426316148c5a14c496dfb 583 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 58 578 2.5E-122 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 IX88_04085 6a4e6318245426316148c5a14c496dfb 583 Gene3D G3DSA:3.40.50.300 118 305 6.9E-85 T 11-10-2018 IX88_04085 6a4e6318245426316148c5a14c496dfb 583 Pfam PF13538 UvrD-like helicase C-terminal domain 507 552 1.2E-12 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain IX88_04085 6a4e6318245426316148c5a14c496dfb 583 Pfam PF13604 AAA domain 126 321 3.8E-33 T 11-10-2018 IX88_04085 6a4e6318245426316148c5a14c496dfb 583 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 14 576 41.05 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 IX88_04085 6a4e6318245426316148c5a14c496dfb 583 SUPERFAMILY SSF52540 126 558 1.42E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04085 6a4e6318245426316148c5a14c496dfb 583 Gene3D G3DSA:3.40.50.300 306 567 6.9E-85 T 11-10-2018 IX88_12070 e38c55ddd60940dae4238bec6e24783f 452 Pfam PF02163 Peptidase family M50 10 437 2.7E-78 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 IX88_12070 e38c55ddd60940dae4238bec6e24783f 452 SUPERFAMILY SSF50156 204 282 1.12E-14 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 IX88_12070 e38c55ddd60940dae4238bec6e24783f 452 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 221 264 1.5E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 IX88_12070 e38c55ddd60940dae4238bec6e24783f 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 452 1.9E-113 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 IX88_12070 e38c55ddd60940dae4238bec6e24783f 452 SMART SM00228 116 187 5.3E-5 T 11-10-2018 IPR001478 PDZ domain GO:0005515 IX88_12070 e38c55ddd60940dae4238bec6e24783f 452 SMART SM00228 209 278 2.3E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 IX88_12070 e38c55ddd60940dae4238bec6e24783f 452 Gene3D G3DSA:2.30.42.10 127 218 1.7E-21 T 11-10-2018 IX88_12070 e38c55ddd60940dae4238bec6e24783f 452 SUPERFAMILY SSF50156 89 195 1.26E-15 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 IX88_12070 e38c55ddd60940dae4238bec6e24783f 452 Pfam PF13180 PDZ domain 128 192 6.3E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 IX88_12070 e38c55ddd60940dae4238bec6e24783f 452 Gene3D G3DSA:2.30.42.10 219 310 1.1E-14 T 11-10-2018 IX88_03105 de7fe3de269ac44f768f460a8827ff75 302 Pfam PF00892 EamA-like transporter family 6 140 5.0E-25 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_03105 de7fe3de269ac44f768f460a8827ff75 302 Pfam PF00892 EamA-like transporter family 155 285 3.5E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_03105 de7fe3de269ac44f768f460a8827ff75 302 SUPERFAMILY SSF103481 40 143 1.29E-13 T 11-10-2018 IX88_03105 de7fe3de269ac44f768f460a8827ff75 302 SUPERFAMILY SSF103481 193 286 2.88E-11 T 11-10-2018 IX88_02745 b181534d8e6561e4bb6eeb439111d50a 233 Gene3D G3DSA:3.40.50.720 2 228 4.2E-28 T 11-10-2018 IX88_02745 b181534d8e6561e4bb6eeb439111d50a 233 SUPERFAMILY SSF51735 4 221 2.23E-25 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_02745 b181534d8e6561e4bb6eeb439111d50a 233 Pfam PF00106 short chain dehydrogenase 4 185 2.0E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_18010 163825deb4bd6434512875484a749c48 116 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 107 2.8E-9 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 IX88_18010 163825deb4bd6434512875484a749c48 116 Gene3D G3DSA:2.170.150.70 3 116 3.4E-31 T 11-10-2018 IX88_18010 163825deb4bd6434512875484a749c48 116 SUPERFAMILY SSF51316 1 114 6.28E-31 T 11-10-2018 IPR011057 Mss4-like superfamily IX88_11425 394e83c772afcc31d4fc8b6b61125574 404 PIRSF PIRSF000429 1 402 3.5E-133 T 11-10-2018 IPR002155 Thiolase GO:0016747 IX88_11425 394e83c772afcc31d4fc8b6b61125574 404 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 IX88_11425 394e83c772afcc31d4fc8b6b61125574 404 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 2 401 2.8E-228 T 11-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 IX88_11425 394e83c772afcc31d4fc8b6b61125574 404 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 7.1E-140 T 11-10-2018 IPR002155 Thiolase GO:0016747 IX88_11425 394e83c772afcc31d4fc8b6b61125574 404 Gene3D G3DSA:3.40.47.10 141 398 1.4E-158 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_11425 394e83c772afcc31d4fc8b6b61125574 404 SUPERFAMILY SSF53901 3 276 7.37E-83 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_11425 394e83c772afcc31d4fc8b6b61125574 404 Gene3D G3DSA:3.40.47.10 6 282 1.4E-158 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_11425 394e83c772afcc31d4fc8b6b61125574 404 Pfam PF00108 Thiolase, N-terminal domain 5 268 1.8E-80 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 IX88_11425 394e83c772afcc31d4fc8b6b61125574 404 Pfam PF02803 Thiolase, C-terminal domain 276 400 5.0E-46 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 IX88_11425 394e83c772afcc31d4fc8b6b61125574 404 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 IX88_11425 394e83c772afcc31d4fc8b6b61125574 404 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 IX88_11425 394e83c772afcc31d4fc8b6b61125574 404 SUPERFAMILY SSF53901 277 400 5.17E-45 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_12250 5735afe829c82566f5061264cbec5074 848 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 558 621 2.4E-8 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 IX88_12250 5735afe829c82566f5061264cbec5074 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 230 244 2.9E-8 T 11-10-2018 IX88_12250 5735afe829c82566f5061264cbec5074 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 2.9E-8 T 11-10-2018 IX88_12250 5735afe829c82566f5061264cbec5074 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 101 110 2.9E-8 T 11-10-2018 IX88_12250 5735afe829c82566f5061264cbec5074 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 2.9E-8 T 11-10-2018 IX88_12250 5735afe829c82566f5061264cbec5074 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 229 245 1.2E-14 T 11-10-2018 IX88_12250 5735afe829c82566f5061264cbec5074 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.2E-14 T 11-10-2018 IX88_12250 5735afe829c82566f5061264cbec5074 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 1.2E-14 T 11-10-2018 IX88_12250 5735afe829c82566f5061264cbec5074 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 98 116 1.2E-14 T 11-10-2018 IX88_12250 5735afe829c82566f5061264cbec5074 848 Gene3D G3DSA:3.50.50.60 106 241 7.7E-87 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_12250 5735afe829c82566f5061264cbec5074 848 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 677 693 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 IX88_12250 5735afe829c82566f5061264cbec5074 848 Gene3D G3DSA:3.30.413.10 629 793 7.8E-33 T 11-10-2018 IX88_12250 5735afe829c82566f5061264cbec5074 848 Gene3D G3DSA:1.10.10.1100 421 475 1.4E-11 T 11-10-2018 IX88_12250 5735afe829c82566f5061264cbec5074 848 Pfam PF04324 BFD-like [2Fe-2S] binding domain 421 469 4.6E-10 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain IX88_12250 5735afe829c82566f5061264cbec5074 848 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 630 746 4.9E-15 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 IX88_12250 5735afe829c82566f5061264cbec5074 848 Gene3D G3DSA:3.50.50.60 4 278 7.7E-87 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_12250 5735afe829c82566f5061264cbec5074 848 SUPERFAMILY SSF56014 631 804 8.37E-50 T 11-10-2018 IX88_12250 5735afe829c82566f5061264cbec5074 848 SUPERFAMILY SSF51905 145 304 1.6E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_12250 5735afe829c82566f5061264cbec5074 848 PIRSF PIRSF037149 1 836 0.0 T 11-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 IX88_12250 5735afe829c82566f5061264cbec5074 848 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 3 798 0.0 T 11-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 IX88_12250 5735afe829c82566f5061264cbec5074 848 PRINTS PR00397 Sirohaem Fe-binding site signature 677 695 7.0E-6 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 IX88_12250 5735afe829c82566f5061264cbec5074 848 PRINTS PR00397 Sirohaem Fe-binding site signature 634 652 7.0E-6 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 IX88_12250 5735afe829c82566f5061264cbec5074 848 SUPERFAMILY SSF55124 500 639 3.27E-24 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 IX88_12250 5735afe829c82566f5061264cbec5074 848 SUPERFAMILY SSF51905 2 186 5.1E-40 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_12250 5735afe829c82566f5061264cbec5074 848 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 280 2.1E-49 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_16160 ee7716acf5a50254ee9c4d3b0f3a0928 310 Gene3D G3DSA:3.40.50.1220 184 310 8.2E-54 T 11-10-2018 IX88_16160 ee7716acf5a50254ee9c4d3b0f3a0928 310 Gene3D G3DSA:3.40.50.620 2 183 1.8E-54 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_16160 ee7716acf5a50254ee9c4d3b0f3a0928 310 SUPERFAMILY SSF52402 2 185 2.23E-57 T 11-10-2018 IX88_16160 ee7716acf5a50254ee9c4d3b0f3a0928 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 4.3E-34 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 IX88_16160 ee7716acf5a50254ee9c4d3b0f3a0928 310 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 IX88_16160 ee7716acf5a50254ee9c4d3b0f3a0928 310 SMART SM00893 3 182 8.0E-53 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 IX88_16160 ee7716acf5a50254ee9c4d3b0f3a0928 310 PIRSF PIRSF000089 1 310 6.4E-102 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 IX88_16160 ee7716acf5a50254ee9c4d3b0f3a0928 310 SUPERFAMILY SSF52467 189 309 9.06E-45 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily IX88_16160 ee7716acf5a50254ee9c4d3b0f3a0928 310 Pfam PF01012 Electron transfer flavoprotein domain 4 167 1.5E-39 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 IX88_16485 d21e07e965ef486c6661b05e089f46e0 96 SUPERFAMILY SSF50129 2 95 4.4E-34 T 11-10-2018 IPR011032 GroES-like superfamily IX88_16485 d21e07e965ef486c6661b05e089f46e0 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 4 28 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 IX88_16485 d21e07e965ef486c6661b05e089f46e0 96 SMART SM00883 3 94 2.6E-58 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 IX88_16485 d21e07e965ef486c6661b05e089f46e0 96 Gene3D G3DSA:2.30.33.40 1 96 5.2E-37 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 IX88_16485 d21e07e965ef486c6661b05e089f46e0 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 93 1.1E-34 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 IX88_16485 d21e07e965ef486c6661b05e089f46e0 96 PRINTS PR00297 10kDa chaperonin signature 60 72 5.6E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 IX88_16485 d21e07e965ef486c6661b05e089f46e0 96 PRINTS PR00297 10kDa chaperonin signature 4 19 5.6E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 IX88_16485 d21e07e965ef486c6661b05e089f46e0 96 PRINTS PR00297 10kDa chaperonin signature 26 47 5.6E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 IX88_16485 d21e07e965ef486c6661b05e089f46e0 96 PRINTS PR00297 10kDa chaperonin signature 81 94 5.6E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 IX88_16485 d21e07e965ef486c6661b05e089f46e0 96 Hamap MF_00580 10 kDa chaperonin [groS]. 3 95 26.928 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 IX88_15925 b16e51e5231e6b8166d6487c56599e65 210 Gene3D G3DSA:3.40.50.620 14 201 1.3E-52 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_15925 b16e51e5231e6b8166d6487c56599e65 210 Pfam PF01467 Cytidylyltransferase-like 22 77 1.2E-6 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 IX88_15925 b16e51e5231e6b8166d6487c56599e65 210 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 22 81 2.5E-9 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 IX88_15925 b16e51e5231e6b8166d6487c56599e65 210 SUPERFAMILY SSF52374 22 182 1.63E-22 T 11-10-2018 IX88_04095 8bfaa2541ec67e17d2423c4666159fc8 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.206 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_04095 8bfaa2541ec67e17d2423c4666159fc8 89 SMART SM01387 8 88 1.6E-51 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_04095 8bfaa2541ec67e17d2423c4666159fc8 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_04095 8bfaa2541ec67e17d2423c4666159fc8 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 3.9E-38 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_04095 8bfaa2541ec67e17d2423c4666159fc8 89 SUPERFAMILY SSF47060 3 89 4.41E-35 T 11-10-2018 IPR009068 S15/NS1, RNA-binding IX88_04095 8bfaa2541ec67e17d2423c4666159fc8 89 Pfam PF00312 Ribosomal protein S15 9 88 2.2E-36 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_04095 8bfaa2541ec67e17d2423c4666159fc8 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 6.0E-37 T 11-10-2018 IX88_04095 8bfaa2541ec67e17d2423c4666159fc8 89 Gene3D G3DSA:1.10.287.10 2 89 2.9E-35 T 11-10-2018 IX88_02550 06044f3ae77f795bca222d198daf64fb 281 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 24 112 1.8E-24 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 IX88_02550 06044f3ae77f795bca222d198daf64fb 281 SUPERFAMILY SSF51690 114 279 5.1E-60 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 IX88_02550 06044f3ae77f795bca222d198daf64fb 281 SUPERFAMILY SSF54675 6 112 1.58E-30 T 11-10-2018 IX88_02550 06044f3ae77f795bca222d198daf64fb 281 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 16 279 3.6E-96 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 IX88_02550 06044f3ae77f795bca222d198daf64fb 281 Gene3D G3DSA:3.90.1170.20 10 278 5.9E-111 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 IX88_02550 06044f3ae77f795bca222d198daf64fb 281 Gene3D G3DSA:3.20.20.70 123 269 5.9E-111 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_02550 06044f3ae77f795bca222d198daf64fb 281 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 114 278 2.4E-58 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 IX88_02550 06044f3ae77f795bca222d198daf64fb 281 PIRSF PIRSF006250 6 281 1.3E-96 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 IX88_09275 dd648f86f861797670708d509c9aa185 1187 Gene3D G3DSA:3.20.20.140 1 261 2.1E-76 T 11-10-2018 IX88_09275 dd648f86f861797670708d509c9aa185 1187 Pfam PF02811 PHP domain 6 163 9.6E-25 T 11-10-2018 IPR004013 PHP domain GO:0003824 IX88_09275 dd648f86f861797670708d509c9aa185 1187 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 283 725 1.8E-165 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_09275 dd648f86f861797670708d509c9aa185 1187 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 988 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_09275 dd648f86f861797670708d509c9aa185 1187 Pfam PF14579 Helix-hairpin-helix motif 799 888 4.3E-28 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_09275 dd648f86f861797670708d509c9aa185 1187 SUPERFAMILY SSF160975 823 873 4.32E-5 T 11-10-2018 IX88_09275 dd648f86f861797670708d509c9aa185 1187 SUPERFAMILY SSF89550 8 254 8.63E-13 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 IX88_09275 dd648f86f861797670708d509c9aa185 1187 SMART SM00481 4 71 3.7E-14 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal IX88_09275 dd648f86f861797670708d509c9aa185 1187 Gene3D G3DSA:1.10.10.1600 428 511 5.4E-25 T 11-10-2018 IX88_17790 e0f82f7abe3e825536e664c4c160b1bb 100 Gene3D G3DSA:3.30.70.1060 1 97 1.7E-30 T 11-10-2018 IX88_17790 e0f82f7abe3e825536e664c4c160b1bb 100 SUPERFAMILY SSF54909 1 96 5.36E-26 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel IX88_17790 e0f82f7abe3e825536e664c4c160b1bb 100 Pfam PF03795 YCII-related domain 3 94 2.9E-20 T 11-10-2018 IPR005545 YCII-related IX88_05160 881affa495fcf29230434c997e6e3e92 640 Pfam PF02824 TGS domain 4 61 3.4E-10 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 IX88_05160 881affa495fcf29230434c997e6e3e92 640 Gene3D G3DSA:3.30.930.10 222 530 5.2E-129 T 11-10-2018 IX88_05160 881affa495fcf29230434c997e6e3e92 640 Gene3D G3DSA:3.40.50.800 531 637 1.3E-28 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily IX88_05160 881affa495fcf29230434c997e6e3e92 640 Gene3D G3DSA:3.30.54.20 130 186 6.3E-61 T 11-10-2018 IX88_05160 881affa495fcf29230434c997e6e3e92 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 218 4.6E-14 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 IX88_05160 881affa495fcf29230434c997e6e3e92 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 528 2.7E-45 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_05160 881affa495fcf29230434c997e6e3e92 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 33.415 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 IX88_05160 881affa495fcf29230434c997e6e3e92 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 4.7E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 IX88_05160 881affa495fcf29230434c997e6e3e92 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 4.7E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 IX88_05160 881affa495fcf29230434c997e6e3e92 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 4.7E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 IX88_05160 881affa495fcf29230434c997e6e3e92 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 4.7E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 IX88_05160 881affa495fcf29230434c997e6e3e92 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 4.7E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 IX88_05160 881affa495fcf29230434c997e6e3e92 640 SMART SM00863 169 218 1.8E-20 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 IX88_05160 881affa495fcf29230434c997e6e3e92 640 Pfam PF03129 Anticodon binding domain 540 629 5.1E-19 T 11-10-2018 IPR004154 Anticodon-binding IX88_05160 881affa495fcf29230434c997e6e3e92 640 SUPERFAMILY SSF52954 528 632 1.66E-29 T 11-10-2018 IX88_05160 881affa495fcf29230434c997e6e3e92 640 Gene3D G3DSA:3.10.20.30 3 63 5.8E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily IX88_05160 881affa495fcf29230434c997e6e3e92 640 Gene3D G3DSA:3.30.980.10 69 221 6.3E-61 T 11-10-2018 IX88_05160 881affa495fcf29230434c997e6e3e92 640 SUPERFAMILY SSF55681 242 525 7.66E-98 T 11-10-2018 IX88_05160 881affa495fcf29230434c997e6e3e92 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 629 7.9E-223 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 IX88_05160 881affa495fcf29230434c997e6e3e92 640 SUPERFAMILY SSF55186 63 240 1.26E-64 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 IX88_05160 881affa495fcf29230434c997e6e3e92 640 SUPERFAMILY SSF81271 3 61 4.58E-15 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 IX88_16670 d3553a6c672cef4d52bd9261eba80d24 337 Gene3D G3DSA:1.10.240.10 188 302 1.9E-104 T 11-10-2018 IX88_16670 d3553a6c672cef4d52bd9261eba80d24 337 Pfam PF00579 tRNA synthetases class I (W and Y) 7 288 4.5E-55 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_16670 d3553a6c672cef4d52bd9261eba80d24 337 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 7 334 1.7E-71 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 IX88_16670 d3553a6c672cef4d52bd9261eba80d24 337 SUPERFAMILY SSF52374 9 334 4.91E-79 T 11-10-2018 IX88_16670 d3553a6c672cef4d52bd9261eba80d24 337 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 25 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_16670 d3553a6c672cef4d52bd9261eba80d24 337 Gene3D G3DSA:3.40.50.620 10 329 1.9E-104 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_16670 d3553a6c672cef4d52bd9261eba80d24 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 71 90 1.3E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 IX88_16670 d3553a6c672cef4d52bd9261eba80d24 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 20 36 1.3E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 IX88_16670 d3553a6c672cef4d52bd9261eba80d24 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 201 211 1.3E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 IX88_16670 d3553a6c672cef4d52bd9261eba80d24 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 149 170 1.3E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 Pfam PF13193 AMP-binding enzyme C-terminal domain 880 952 2.2E-8 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 SUPERFAMILY SSF47336 969 1043 1.02E-18 T 11-10-2018 IPR036736 ACP-like superfamily IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 Gene3D G3DSA:3.30.300.30 867 967 5.6E-32 T 11-10-2018 IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 SUPERFAMILY SSF56801 477 990 9.42E-138 T 11-10-2018 IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 Pfam PF00550 Phosphopantetheine attachment site 980 1041 2.2E-13 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 Gene3D G3DSA:1.10.1200.10 968 1047 5.4E-24 T 11-10-2018 IPR036736 ACP-like superfamily IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 Pfam PF00668 Condensation domain 17 460 1.3E-66 T 11-10-2018 IPR001242 Condensation domain IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 SMART SM00823 Phosphopantetheine attachment site 977 1046 7.9E-4 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 SUPERFAMILY SSF53474 1049 1313 1.84E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 Gene3D G3DSA:3.40.50.12780 472 866 2.6E-111 T 11-10-2018 IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 506 896 1.5E-117 T 11-10-2018 IPR010071 Amino acid adenylation domain IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 Gene3D G3DSA:3.30.559.30 191 451 1.3E-88 T 11-10-2018 IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 Gene3D G3DSA:3.30.559.10 17 394 1.3E-88 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 Pfam PF00975 Thioesterase domain 1064 1313 5.0E-31 T 11-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 Gene3D G3DSA:3.40.50.1820 1048 1314 8.2E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 ProSitePatterns PS00455 Putative AMP-binding domain signature. 622 633 - T 11-10-2018 IPR020845 AMP-binding, conserved site IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1001 1016 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 Pfam PF00501 AMP-binding enzyme 488 872 3.2E-85 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 SUPERFAMILY SSF52777 18 187 1.22E-24 T 11-10-2018 IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 SUPERFAMILY SSF52777 192 456 1.22E-45 T 11-10-2018 IX88_02880 55746659d8bb3a12d41ad40d853e51d3 1319 SMART SM00824 Thioesterase 1076 1315 0.0012 T 11-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 IX88_04550 8d5cf5d78864e564d2a805aba9ea5730 230 Gene3D G3DSA:1.10.357.10 5 219 1.5E-65 T 11-10-2018 IX88_04550 8d5cf5d78864e564d2a805aba9ea5730 230 Pfam PF13972 Bacterial transcriptional repressor 62 208 3.1E-38 T 11-10-2018 IPR025722 Bacterial transcriptional repressor TetR IX88_04550 8d5cf5d78864e564d2a805aba9ea5730 230 SUPERFAMILY SSF46689 6 75 6.16E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_04550 8d5cf5d78864e564d2a805aba9ea5730 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 7.9E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_04550 8d5cf5d78864e564d2a805aba9ea5730 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.0E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_04550 8d5cf5d78864e564d2a805aba9ea5730 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.0E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_15195 980eea78ec5c5ca1e84fbd7e904a636e 289 Gene3D G3DSA:1.10.1200.10 215 285 1.1E-18 T 11-10-2018 IPR036736 ACP-like superfamily IX88_15195 980eea78ec5c5ca1e84fbd7e904a636e 289 SUPERFAMILY SSF47336 216 284 6.41E-9 T 11-10-2018 IPR036736 ACP-like superfamily IX88_15195 980eea78ec5c5ca1e84fbd7e904a636e 289 Gene3D G3DSA:3.40.50.850 1 209 3.2E-74 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 IX88_15195 980eea78ec5c5ca1e84fbd7e904a636e 289 PRINTS PR01398 Isochorismatase signature 169 187 8.5E-45 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 IX88_15195 980eea78ec5c5ca1e84fbd7e904a636e 289 PRINTS PR01398 Isochorismatase signature 113 135 8.5E-45 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 IX88_15195 980eea78ec5c5ca1e84fbd7e904a636e 289 PRINTS PR01398 Isochorismatase signature 63 80 8.5E-45 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 IX88_15195 980eea78ec5c5ca1e84fbd7e904a636e 289 PRINTS PR01398 Isochorismatase signature 187 204 8.5E-45 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 IX88_15195 980eea78ec5c5ca1e84fbd7e904a636e 289 PRINTS PR01398 Isochorismatase signature 2 14 8.5E-45 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 IX88_15195 980eea78ec5c5ca1e84fbd7e904a636e 289 PRINTS PR01398 Isochorismatase signature 80 99 8.5E-45 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 IX88_15195 980eea78ec5c5ca1e84fbd7e904a636e 289 Pfam PF00550 Phosphopantetheine attachment site 220 276 2.1E-7 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain IX88_15195 980eea78ec5c5ca1e84fbd7e904a636e 289 PIRSF PIRSF001111 1 288 3.1E-132 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 IX88_15195 980eea78ec5c5ca1e84fbd7e904a636e 289 Pfam PF00857 Isochorismatase family 32 205 1.4E-31 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 IX88_15195 980eea78ec5c5ca1e84fbd7e904a636e 289 SUPERFAMILY SSF52499 1 225 9.42E-61 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 IX88_01250 1542b626cd3c0471c9ac63e47d74bd4c 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 7.3E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_01250 1542b626cd3c0471c9ac63e47d74bd4c 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 7.3E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_01250 1542b626cd3c0471c9ac63e47d74bd4c 200 Pfam PF16925 Bacterial transcriptional repressor C-terminal 99 193 2.2E-12 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal IX88_01250 1542b626cd3c0471c9ac63e47d74bd4c 200 SUPERFAMILY SSF46689 3 78 1.95E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_01250 1542b626cd3c0471c9ac63e47d74bd4c 200 Gene3D G3DSA:1.10.357.10 1 200 6.2E-71 T 11-10-2018 IX88_01250 1542b626cd3c0471c9ac63e47d74bd4c 200 SUPERFAMILY SSF48498 82 196 6.4E-24 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_01250 1542b626cd3c0471c9ac63e47d74bd4c 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 55 2.2E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_15590 53c4e7e0f8f4a215a8de4bb94803644a 418 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 417 7.0E-220 T 11-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 IX88_15590 53c4e7e0f8f4a215a8de4bb94803644a 418 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 31 412 4.6E-111 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 IX88_15590 53c4e7e0f8f4a215a8de4bb94803644a 418 Gene3D G3DSA:3.40.718.10 1 417 5.6E-180 T 11-10-2018 IX88_15590 53c4e7e0f8f4a215a8de4bb94803644a 418 SMART SM01329 30 412 1.4E-177 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 IX88_15590 53c4e7e0f8f4a215a8de4bb94803644a 418 SUPERFAMILY SSF53659 4 416 3.26E-142 T 11-10-2018 IX88_15590 53c4e7e0f8f4a215a8de4bb94803644a 418 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 IX88_05795 6ec9fcb98bbba3db9739c136339ddfb2 532 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 8 507 4.3E-158 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05795 6ec9fcb98bbba3db9739c136339ddfb2 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 143 162 3.7E-34 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05795 6ec9fcb98bbba3db9739c136339ddfb2 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 178 202 3.7E-34 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05795 6ec9fcb98bbba3db9739c136339ddfb2 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 395 421 3.7E-34 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05795 6ec9fcb98bbba3db9739c136339ddfb2 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 343 362 3.7E-34 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05795 6ec9fcb98bbba3db9739c136339ddfb2 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 255 279 3.7E-34 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05795 6ec9fcb98bbba3db9739c136339ddfb2 532 Pfam PF00361 Proton-conducting membrane transporter 137 437 4.1E-66 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_06135 5f88cfc8a526d13dd6a8a8852e8bc852 316 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 4.9E-50 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 IX88_06135 5f88cfc8a526d13dd6a8a8852e8bc852 316 Pfam PF14572 Phosphoribosyl synthetase-associated domain 197 313 8.6E-29 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 IX88_06135 5f88cfc8a526d13dd6a8a8852e8bc852 316 Gene3D G3DSA:3.40.50.2020 7 302 1.3E-131 T 11-10-2018 IX88_06135 5f88cfc8a526d13dd6a8a8852e8bc852 316 SMART SM01400 4 121 7.3E-79 T 11-10-2018 IX88_06135 5f88cfc8a526d13dd6a8a8852e8bc852 316 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 48.503 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 IX88_06135 5f88cfc8a526d13dd6a8a8852e8bc852 316 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 314 1.8E-121 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 IX88_06135 5f88cfc8a526d13dd6a8a8852e8bc852 316 SUPERFAMILY SSF53271 69 306 2.14E-65 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like IX88_06135 5f88cfc8a526d13dd6a8a8852e8bc852 316 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 IX88_06135 5f88cfc8a526d13dd6a8a8852e8bc852 316 Gene3D G3DSA:3.40.50.2020 148 290 1.3E-131 T 11-10-2018 IX88_06170 acf27849c6ccf59322f5236ea93a45f8 569 SUPERFAMILY SSF48452 176 305 1.69E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_06170 acf27849c6ccf59322f5236ea93a45f8 569 Gene3D G3DSA:1.25.40.10 172 342 5.2E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_06170 acf27849c6ccf59322f5236ea93a45f8 569 Pfam PF13432 Tetratricopeptide repeat 251 304 0.0081 T 11-10-2018 IX88_06170 acf27849c6ccf59322f5236ea93a45f8 569 Gene3D G3DSA:1.25.40.10 430 567 9.8E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_06170 acf27849c6ccf59322f5236ea93a45f8 569 SUPERFAMILY SSF48452 316 418 5.9E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_06170 acf27849c6ccf59322f5236ea93a45f8 569 Pfam PF13181 Tetratricopeptide repeat 453 483 0.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IX88_06170 acf27849c6ccf59322f5236ea93a45f8 569 Gene3D G3DSA:1.25.40.10 28 171 7.0E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_06170 acf27849c6ccf59322f5236ea93a45f8 569 SMART SM00028 213 246 230.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IX88_06170 acf27849c6ccf59322f5236ea93a45f8 569 SMART SM00028 382 415 2.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IX88_06170 acf27849c6ccf59322f5236ea93a45f8 569 SMART SM00028 347 380 330.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IX88_06170 acf27849c6ccf59322f5236ea93a45f8 569 SMART SM00028 113 146 11.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IX88_06170 acf27849c6ccf59322f5236ea93a45f8 569 SMART SM00028 179 212 6.6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IX88_06170 acf27849c6ccf59322f5236ea93a45f8 569 SMART SM00028 485 518 7.9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IX88_06170 acf27849c6ccf59322f5236ea93a45f8 569 Gene3D G3DSA:1.25.40.10 343 429 6.0E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_06170 acf27849c6ccf59322f5236ea93a45f8 569 SUPERFAMILY SSF48452 388 508 3.16E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_06170 acf27849c6ccf59322f5236ea93a45f8 569 SUPERFAMILY SSF48452 80 145 4.74E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_06170 acf27849c6ccf59322f5236ea93a45f8 569 Pfam PF14559 Tetratricopeptide repeat 496 557 3.8E-6 T 11-10-2018 IX88_12260 5284d183a67ecde701e212739b6707e0 196 Pfam PF00072 Response regulator receiver domain 6 112 6.0E-9 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_12260 5284d183a67ecde701e212739b6707e0 196 PIRSF PIRSF036382 1 190 1.0E-48 T 11-10-2018 IPR008327 Signal transduction response regulator, antiterminator IX88_12260 5284d183a67ecde701e212739b6707e0 196 SMART SM01012 128 183 6.8E-20 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 IX88_12260 5284d183a67ecde701e212739b6707e0 196 Gene3D G3DSA:1.10.10.10 131 191 1.3E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_12260 5284d183a67ecde701e212739b6707e0 196 SUPERFAMILY SSF52172 1 183 3.56E-42 T 11-10-2018 IPR011006 CheY-like superfamily IX88_12260 5284d183a67ecde701e212739b6707e0 196 Pfam PF03861 ANTAR domain 131 183 2.9E-16 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 IX88_12260 5284d183a67ecde701e212739b6707e0 196 SMART SM00448 4 112 0.0038 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_12260 5284d183a67ecde701e212739b6707e0 196 Gene3D G3DSA:3.40.50.2300 1 129 2.2E-13 T 11-10-2018 IX88_06085 46c6b674ae989f0d3640552aaf9543bf 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 9.2E-30 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 IX88_06085 46c6b674ae989f0d3640552aaf9543bf 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 6.8E-16 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain IX88_06085 46c6b674ae989f0d3640552aaf9543bf 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site IX88_06085 46c6b674ae989f0d3640552aaf9543bf 78 SUPERFAMILY SSF47336 2 77 1.31E-22 T 11-10-2018 IPR036736 ACP-like superfamily IX88_06085 46c6b674ae989f0d3640552aaf9543bf 78 Gene3D G3DSA:1.10.1200.10 1 77 1.2E-25 T 11-10-2018 IPR036736 ACP-like superfamily IX88_06085 46c6b674ae989f0d3640552aaf9543bf 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 20.511 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 IX88_06085 46c6b674ae989f0d3640552aaf9543bf 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 77 3.0E-14 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 IX88_04255 15af10181aebfdec17f3cd7eba5db217 416 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 244 381 1.4E-16 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain IX88_04255 15af10181aebfdec17f3cd7eba5db217 416 Gene3D G3DSA:1.20.140.10 228 405 1.0E-53 T 11-10-2018 IX88_04255 15af10181aebfdec17f3cd7eba5db217 416 Gene3D G3DSA:2.40.110.10 129 227 1.2E-26 T 11-10-2018 IX88_04255 15af10181aebfdec17f3cd7eba5db217 416 PIRSF PIRSF016578 5 90 4.6E-7 T 11-10-2018 IX88_04255 15af10181aebfdec17f3cd7eba5db217 416 PIRSF PIRSF016578 141 394 1.4E-22 T 11-10-2018 IX88_04255 15af10181aebfdec17f3cd7eba5db217 416 SUPERFAMILY SSF56645 25 227 1.23E-35 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_04255 15af10181aebfdec17f3cd7eba5db217 416 Gene3D G3DSA:1.10.540.10 13 128 5.8E-18 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_04255 15af10181aebfdec17f3cd7eba5db217 416 SUPERFAMILY SSF47203 238 382 6.09E-13 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_01440 bdbe5e7435418828c31bc0b14fadaac4 391 ProSitePatterns PS01134 FtsZ protein signature 1. 50 84 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 IX88_01440 bdbe5e7435418828c31bc0b14fadaac4 391 Gene3D G3DSA:3.40.50.1440 11 225 1.5E-77 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 IX88_01440 bdbe5e7435418828c31bc0b14fadaac4 391 SMART SM00864 19 210 6.9E-110 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 IX88_01440 bdbe5e7435418828c31bc0b14fadaac4 391 SMART SM00865 212 331 3.6E-46 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 IX88_01440 bdbe5e7435418828c31bc0b14fadaac4 391 PRINTS PR00423 Cell division protein FtsZ signature 132 153 5.7E-44 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 IX88_01440 bdbe5e7435418828c31bc0b14fadaac4 391 PRINTS PR00423 Cell division protein FtsZ signature 104 124 5.7E-44 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 IX88_01440 bdbe5e7435418828c31bc0b14fadaac4 391 PRINTS PR00423 Cell division protein FtsZ signature 217 238 5.7E-44 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 IX88_01440 bdbe5e7435418828c31bc0b14fadaac4 391 PRINTS PR00423 Cell division protein FtsZ signature 194 216 5.7E-44 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 IX88_01440 bdbe5e7435418828c31bc0b14fadaac4 391 Gene3D G3DSA:3.30.1330.20 226 340 4.5E-33 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 IX88_01440 bdbe5e7435418828c31bc0b14fadaac4 391 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 345 8.8E-125 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 IX88_01440 bdbe5e7435418828c31bc0b14fadaac4 391 ProSitePatterns PS01135 FtsZ protein signature 2. 103 124 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 IX88_01440 bdbe5e7435418828c31bc0b14fadaac4 391 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 15 352 35.882 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 IX88_01440 bdbe5e7435418828c31bc0b14fadaac4 391 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 21 179 7.3E-43 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 IX88_01440 bdbe5e7435418828c31bc0b14fadaac4 391 SUPERFAMILY SSF55307 210 325 3.66E-37 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 IX88_01440 bdbe5e7435418828c31bc0b14fadaac4 391 SUPERFAMILY SSF52490 18 213 1.96E-67 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 IX88_01440 bdbe5e7435418828c31bc0b14fadaac4 391 Pfam PF12327 FtsZ family, C-terminal domain 227 322 4.6E-31 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal IX88_02215 1de660842e095c96e0ac12581a40ee4c 106 Pfam PF01809 Haemolytic domain 3 68 8.0E-30 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor IX88_02215 1de660842e095c96e0ac12581a40ee4c 106 SMART SM01234 1 68 1.5E-44 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor IX88_02215 1de660842e095c96e0ac12581a40ee4c 106 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 8.0E-22 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor IX88_02215 1de660842e095c96e0ac12581a40ee4c 106 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 24.37 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor IX88_02215 1de660842e095c96e0ac12581a40ee4c 106 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 8 72 3.0E-28 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor IX88_11635 5a350c68fb4c0dac3716761c24930b7f 223 SMART SM00882 6 219 1.5E-79 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 IX88_11635 5a350c68fb4c0dac3716761c24930b7f 223 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 9.0E-121 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 IX88_11635 5a350c68fb4c0dac3716761c24930b7f 223 Pfam PF01144 Coenzyme A transferase 8 218 7.3E-72 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 IX88_11635 5a350c68fb4c0dac3716761c24930b7f 223 SUPERFAMILY SSF100950 2 221 2.21E-78 T 11-10-2018 IPR037171 NagB/RpiA transferase-like IX88_11635 5a350c68fb4c0dac3716761c24930b7f 223 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 11-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 IX88_11635 5a350c68fb4c0dac3716761c24930b7f 223 Gene3D G3DSA:3.40.1080.10 1 218 2.0E-78 T 11-10-2018 IX88_05495 39839a6b3519dcdf1e26da05c7498723 251 SUPERFAMILY SSF56925 108 250 9.16E-6 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IX88_05495 39839a6b3519dcdf1e26da05c7498723 251 Pfam PF05275 Copper resistance protein B precursor (CopB) 42 251 2.7E-45 T 11-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 IX88_06915 74820baf2d9a22f1680531d728b77546 212 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 18 211 4.3E-87 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 IX88_06915 74820baf2d9a22f1680531d728b77546 212 Pfam PF01106 NifU-like domain 127 198 1.2E-20 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 IX88_06915 74820baf2d9a22f1680531d728b77546 212 SUPERFAMILY SSF89360 14 110 7.26E-20 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 IX88_06915 74820baf2d9a22f1680531d728b77546 212 Pfam PF01521 Iron-sulphur cluster biosynthesis 17 112 5.5E-8 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 IX88_06915 74820baf2d9a22f1680531d728b77546 212 Gene3D G3DSA:3.30.300.130 121 210 1.6E-20 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily IX88_06915 74820baf2d9a22f1680531d728b77546 212 SUPERFAMILY SSF117916 111 204 1.53E-21 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily IX88_06915 74820baf2d9a22f1680531d728b77546 212 Gene3D G3DSA:2.60.300.12 16 113 5.0E-9 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 IX88_06915 74820baf2d9a22f1680531d728b77546 212 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 134 198 3.0E-29 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 IX88_06915 74820baf2d9a22f1680531d728b77546 212 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 16 211 40.737 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 IX88_04450 bd44578e436595dcd79c7301215b6f0d 311 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 9 311 42.684 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 IX88_04450 bd44578e436595dcd79c7301215b6f0d 311 PIRSF PIRSF026649 8 311 5.6E-89 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 IX88_04450 bd44578e436595dcd79c7301215b6f0d 311 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 11 302 1.3E-67 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 IX88_04450 bd44578e436595dcd79c7301215b6f0d 311 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 11 311 1.2E-89 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 IX88_09255 2f78223c5588c2df686c611f0472867f 668 SUPERFAMILY SSF53474 377 646 2.05E-22 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_09255 2f78223c5588c2df686c611f0472867f 668 Gene3D G3DSA:3.40.50.1820 375 639 1.3E-24 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_09530 a90fa59e414e42f994789353417e8924 809 Pfam PF13954 PapC N-terminal domain 11 152 9.1E-46 T 11-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 IX88_09530 a90fa59e414e42f994789353417e8924 809 Gene3D G3DSA:2.60.40.2070 725 809 3.8E-16 T 11-10-2018 IX88_09530 a90fa59e414e42f994789353417e8924 809 Gene3D G3DSA:2.60.40.2610 633 723 1.6E-27 T 11-10-2018 IX88_09530 a90fa59e414e42f994789353417e8924 809 SUPERFAMILY SSF141729 31 144 5.89E-34 T 11-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 IX88_09530 a90fa59e414e42f994789353417e8924 809 Gene3D G3DSA:3.10.20.410 8 130 1.5E-32 T 11-10-2018 IX88_09530 a90fa59e414e42f994789353417e8924 809 Gene3D G3DSA:2.60.40.3110 242 331 3.2E-35 T 11-10-2018 IX88_09530 a90fa59e414e42f994789353417e8924 809 Pfam PF00577 Outer membrane usher protein 170 718 1.0E-152 T 11-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 IX88_09530 a90fa59e414e42f994789353417e8924 809 Pfam PF13953 PapC C-terminal domain 727 791 3.7E-17 T 11-10-2018 IPR025949 PapC-like, C-terminal domain IX88_09150 8461474e66be86b956e12690a5aa372f 463 SUPERFAMILY SSF51679 1 440 6.02E-122 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 IX88_09150 8461474e66be86b956e12690a5aa372f 463 Pfam PF00296 Luciferase-like monooxygenase 25 389 5.8E-47 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 IX88_09150 8461474e66be86b956e12690a5aa372f 463 PIRSF PIRSF000337 2 449 5.5E-140 T 11-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 IX88_09150 8461474e66be86b956e12690a5aa372f 463 Gene3D G3DSA:3.20.20.30 1 457 3.1E-141 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 IX88_09150 8461474e66be86b956e12690a5aa372f 463 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 7 434 2.4E-165 T 11-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 IX88_11385 ef7057e07b85f8478f8c17b82d3e40e8 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 78 1.5E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_11385 ef7057e07b85f8478f8c17b82d3e40e8 238 SUPERFAMILY SSF46785 8 82 2.72E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_11385 ef7057e07b85f8478f8c17b82d3e40e8 238 SMART SM00345 19 78 7.1E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_11385 ef7057e07b85f8478f8c17b82d3e40e8 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 1.6E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_11385 ef7057e07b85f8478f8c17b82d3e40e8 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 1.6E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_11385 ef7057e07b85f8478f8c17b82d3e40e8 238 Pfam PF07729 FCD domain 110 221 1.5E-20 T 11-10-2018 IPR011711 GntR, C-terminal IX88_11385 ef7057e07b85f8478f8c17b82d3e40e8 238 Gene3D G3DSA:1.20.120.530 105 236 2.4E-25 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_11385 ef7057e07b85f8478f8c17b82d3e40e8 238 Gene3D G3DSA:1.10.10.10 11 85 8.5E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_11385 ef7057e07b85f8478f8c17b82d3e40e8 238 SMART SM00895 107 228 6.5E-19 T 11-10-2018 IPR011711 GntR, C-terminal IX88_11385 ef7057e07b85f8478f8c17b82d3e40e8 238 SUPERFAMILY SSF48008 108 229 1.12E-24 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_07370 7d6202b1787abd411aad3bb50ef414fa 344 Gene3D G3DSA:3.20.20.140 2 343 1.4E-105 T 11-10-2018 IX88_07370 7d6202b1787abd411aad3bb50ef414fa 344 SUPERFAMILY SSF51556 2 342 1.76E-141 T 11-10-2018 IPR032466 Metal-dependent hydrolase IX88_07370 7d6202b1787abd411aad3bb50ef414fa 344 PIRSF PIRSF001237 1 344 2.5E-143 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_07370 7d6202b1787abd411aad3bb50ef414fa 344 Pfam PF01979 Amidohydrolase family 11 311 1.7E-17 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 IX88_07370 7d6202b1787abd411aad3bb50ef414fa 344 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_07370 7d6202b1787abd411aad3bb50ef414fa 344 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 4.1E-138 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_07370 7d6202b1787abd411aad3bb50ef414fa 344 ProSitePatterns PS00483 Dihydroorotase signature 2. 245 256 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_07370 7d6202b1787abd411aad3bb50ef414fa 344 Hamap MF_00219 Dihydroorotase [pyrC]. 2 344 45.453 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_06585 8cdfac8dfdcc18b2fa7b07d355da0915 461 SUPERFAMILY SSF103473 21 458 5.36E-84 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_06585 8cdfac8dfdcc18b2fa7b07d355da0915 461 Gene3D G3DSA:1.20.1250.20 33 453 1.8E-88 T 11-10-2018 IX88_06585 8cdfac8dfdcc18b2fa7b07d355da0915 461 Pfam PF00083 Sugar (and other) transporter 69 459 9.3E-53 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 IX88_06585 8cdfac8dfdcc18b2fa7b07d355da0915 461 ProSitePatterns PS00217 Sugar transport proteins signature 2. 131 156 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_04650 b03534b59c999de6870186d4aa8566ac 195 Gene3D G3DSA:1.25.40.10 14 195 2.3E-38 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_04650 b03534b59c999de6870186d4aa8566ac 195 Pfam PF08238 Sel1 repeat 89 124 6.1E-9 T 11-10-2018 IPR006597 Sel1-like repeat IX88_04650 b03534b59c999de6870186d4aa8566ac 195 Pfam PF08238 Sel1 repeat 127 152 10.0 T 11-10-2018 IPR006597 Sel1-like repeat IX88_04650 b03534b59c999de6870186d4aa8566ac 195 Pfam PF08238 Sel1 repeat 54 87 3.8E-7 T 11-10-2018 IPR006597 Sel1-like repeat IX88_04650 b03534b59c999de6870186d4aa8566ac 195 SMART SM00671 53 88 7.3E-9 T 11-10-2018 IPR006597 Sel1-like repeat IX88_04650 b03534b59c999de6870186d4aa8566ac 195 SMART SM00671 89 124 4.3E-10 T 11-10-2018 IPR006597 Sel1-like repeat IX88_04650 b03534b59c999de6870186d4aa8566ac 195 SMART SM00671 125 156 190.0 T 11-10-2018 IPR006597 Sel1-like repeat IX88_04650 b03534b59c999de6870186d4aa8566ac 195 SUPERFAMILY SSF81901 41 152 9.94E-29 T 11-10-2018 IX88_00990 4f6fcb6b43a98070ce11dd97284ab2f0 209 Pfam PF06961 Protein of unknown function (DUF1294) 127 181 1.2E-20 T 11-10-2018 IPR010718 Protein of unknown function DUF1294 IX88_00990 4f6fcb6b43a98070ce11dd97284ab2f0 209 Pfam PF00313 'Cold-shock' DNA-binding domain 8 42 6.0E-8 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 IX88_00990 4f6fcb6b43a98070ce11dd97284ab2f0 209 SUPERFAMILY SSF50249 8 70 2.69E-11 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_00990 4f6fcb6b43a98070ce11dd97284ab2f0 209 SMART SM00357 5 69 0.0062 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 IX88_00990 4f6fcb6b43a98070ce11dd97284ab2f0 209 Gene3D G3DSA:2.40.50.140 2 77 3.2E-12 T 11-10-2018 IX88_06010 b3f6a13cdf132769c406fce0d21502b7 283 Gene3D G3DSA:3.30.70.1020 115 188 5.0E-45 T 11-10-2018 IX88_06010 b3f6a13cdf132769c406fce0d21502b7 283 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 31 257 1.1E-37 T 11-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 IX88_06010 b3f6a13cdf132769c406fce0d21502b7 283 Gene3D G3DSA:3.40.50.1000 35 247 5.0E-45 T 11-10-2018 IPR023214 HAD superfamily IX88_06010 b3f6a13cdf132769c406fce0d21502b7 283 SUPERFAMILY SSF56784 35 261 1.4E-39 T 11-10-2018 IPR036412 HAD-like superfamily IX88_06010 b3f6a13cdf132769c406fce0d21502b7 283 Pfam PF02358 Trehalose-phosphatase 36 249 2.3E-30 T 11-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 IX88_06010 b3f6a13cdf132769c406fce0d21502b7 283 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 35 223 2.6E-21 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 IX88_00910 75226437212a625825f44d004e0e1050 254 Gene3D G3DSA:3.40.50.2300 7 141 1.2E-40 T 11-10-2018 IX88_00910 75226437212a625825f44d004e0e1050 254 SMART SM00862 172 248 6.2E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_00910 75226437212a625825f44d004e0e1050 254 SMART SM00448 21 132 1.1E-43 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_00910 75226437212a625825f44d004e0e1050 254 SUPERFAMILY SSF46894 154 250 6.52E-27 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 IX88_00910 75226437212a625825f44d004e0e1050 254 SUPERFAMILY SSF52172 22 143 7.12E-42 T 11-10-2018 IPR011006 CheY-like superfamily IX88_00910 75226437212a625825f44d004e0e1050 254 Gene3D G3DSA:1.10.10.10 146 254 3.2E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_00910 75226437212a625825f44d004e0e1050 254 Pfam PF00486 Transcriptional regulatory protein, C terminal 173 248 1.5E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_00910 75226437212a625825f44d004e0e1050 254 Pfam PF00072 Response regulator receiver domain 23 133 1.7E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 SUPERFAMILY SSF52113 596 670 1.0E-17 T 11-10-2018 IPR036420 BRCT domain superfamily IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 Pfam PF12826 Helix-hairpin-helix motif 515 577 1.1E-20 T 11-10-2018 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 SUPERFAMILY SSF47781 407 588 1.07E-58 T 11-10-2018 IPR010994 RuvA domain 2-like IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 598 667 4.9E-12 T 11-10-2018 IPR001357 BRCT domain IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 334 349 - T 11-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 SUPERFAMILY SSF56091 4 319 2.67E-117 T 11-10-2018 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 Gene3D G3DSA:2.20.70.80 396 433 1.4E-12 T 11-10-2018 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 Pfam PF14520 Helix-hairpin-helix domain 449 505 0.0016 T 11-10-2018 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 Gene3D G3DSA:1.10.150.20 511 589 1.9E-26 T 11-10-2018 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 Gene3D G3DSA:2.40.50.140 321 393 8.1E-33 T 11-10-2018 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 SMART SM00292 596 673 1.2E-9 T 11-10-2018 IPR001357 BRCT domain IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 665 4.8E-250 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 SMART SM00278 449 468 790.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 SMART SM00278 517 536 13.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 SMART SM00278 485 504 4.6 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 SMART SM00278 549 568 400.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 325 400 2.1E-32 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 SMART SM00532 5 451 1.6E-249 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 321 7.5E-129 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 411 437 3.0E-7 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 Gene3D G3DSA:3.30.470.90 73 320 8.2E-100 T 11-10-2018 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 Gene3D G3DSA:3.40.50.10190 590 671 5.1E-26 T 11-10-2018 IPR036420 BRCT domain superfamily IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 PIRSF PIRSF001604 1 674 6.5E-245 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 SUPERFAMILY SSF50249 321 402 7.71E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 Gene3D G3DSA:1.10.287.610 1 72 9.0E-27 T 11-10-2018 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 Gene3D G3DSA:1.10.150.20 435 510 1.7E-27 T 11-10-2018 IX88_05990 8266f1ef033b924ae51fa13576bb2401 678 Hamap MF_01588 DNA ligase [ligA]. 4 670 50.988 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 IX88_06650 815b8b565ff5ba7cbf809202d9ad57af 207 Gene3D G3DSA:1.10.357.10 1 204 1.9E-41 T 11-10-2018 IX88_06650 815b8b565ff5ba7cbf809202d9ad57af 207 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 194 1.1E-28 T 11-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal IX88_06650 815b8b565ff5ba7cbf809202d9ad57af 207 SUPERFAMILY SSF46689 2 84 1.95E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_06650 815b8b565ff5ba7cbf809202d9ad57af 207 SUPERFAMILY SSF48498 83 195 9.12E-17 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_06650 815b8b565ff5ba7cbf809202d9ad57af 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 2.7E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_06650 815b8b565ff5ba7cbf809202d9ad57af 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_06650 815b8b565ff5ba7cbf809202d9ad57af 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_06650 815b8b565ff5ba7cbf809202d9ad57af 207 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 200 83.89 T 11-10-2018 IPR017757 Transcriptional repressor BetI IX88_06650 815b8b565ff5ba7cbf809202d9ad57af 207 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 4 194 6.3E-71 T 11-10-2018 IPR017757 Transcriptional repressor BetI IX88_06650 815b8b565ff5ba7cbf809202d9ad57af 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site IX88_10075 80bb0a67d693e1491286b21c267cd137 405 SUPERFAMILY SSF53383 3 392 1.05E-106 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_10075 80bb0a67d693e1491286b21c267cd137 405 PIRSF PIRSF005572 2 385 4.2E-128 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 IX88_10075 80bb0a67d693e1491286b21c267cd137 405 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 405 2.0E-208 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 IX88_10075 80bb0a67d693e1491286b21c267cd137 405 Pfam PF00266 Aminotransferase class-V 5 369 5.0E-84 T 11-10-2018 IPR000192 Aminotransferase class V domain IX88_10075 80bb0a67d693e1491286b21c267cd137 405 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 396 54.053 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 IX88_10075 80bb0a67d693e1491286b21c267cd137 405 Gene3D G3DSA:3.40.640.10 16 263 6.8E-158 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_10075 80bb0a67d693e1491286b21c267cd137 405 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 217 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IX88_10075 80bb0a67d693e1491286b21c267cd137 405 Gene3D G3DSA:3.90.1150.10 5 377 6.8E-158 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_01455 43e0aa7f0792e88ab54915acbf836000 308 Pfam PF07478 D-ala D-ala ligase C-terminus 106 300 1.8E-54 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_01455 43e0aa7f0792e88ab54915acbf836000 308 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 66 77 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_01455 43e0aa7f0792e88ab54915acbf836000 308 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 246 274 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_01455 43e0aa7f0792e88ab54915acbf836000 308 Pfam PF01820 D-ala D-ala ligase N-terminus 9 88 2.9E-16 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_01455 43e0aa7f0792e88ab54915acbf836000 308 SUPERFAMILY SSF52440 9 99 3.93E-26 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily IX88_01455 43e0aa7f0792e88ab54915acbf836000 308 Gene3D G3DSA:3.40.50.20 1 87 1.9E-33 T 11-10-2018 IX88_01455 43e0aa7f0792e88ab54915acbf836000 308 SUPERFAMILY SSF56059 99 304 4.6E-56 T 11-10-2018 IX88_01455 43e0aa7f0792e88ab54915acbf836000 308 PIRSF PIRSF039102 41 308 9.4E-81 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_01455 43e0aa7f0792e88ab54915acbf836000 308 PIRSF PIRSF039102 5 50 2.3E-7 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_01455 43e0aa7f0792e88ab54915acbf836000 308 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 9 303 2.5E-99 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_01455 43e0aa7f0792e88ab54915acbf836000 308 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 8 304 34.033 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_01455 43e0aa7f0792e88ab54915acbf836000 308 Gene3D G3DSA:3.30.1490.20 115 179 9.9E-29 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 IX88_10835 dd5ebfe917920edce3bd2cbe3b368e37 342 Gene3D G3DSA:2.60.40.1090 196 342 5.0E-24 T 11-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 IX88_10835 dd5ebfe917920edce3bd2cbe3b368e37 342 Gene3D G3DSA:2.60.40.3310 29 195 3.4E-45 T 11-10-2018 IX88_10835 dd5ebfe917920edce3bd2cbe3b368e37 342 SUPERFAMILY SSF49401 194 342 2.19E-20 T 11-10-2018 IPR008966 Adhesion domain superfamily IX88_10835 dd5ebfe917920edce3bd2cbe3b368e37 342 Pfam PF00419 Fimbrial protein 189 341 1.2E-15 T 11-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 IX88_01740 34b37e1acaa03dde383fbe82e670edfd 407 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 194 364 9.5E-33 T 11-10-2018 IX88_01740 34b37e1acaa03dde383fbe82e670edfd 407 SUPERFAMILY SSF55021 1 82 6.25E-9 T 11-10-2018 IX88_01740 34b37e1acaa03dde383fbe82e670edfd 407 Pfam PF13740 ACT domain 3 79 1.5E-21 T 11-10-2018 IX88_01740 34b37e1acaa03dde383fbe82e670edfd 407 Gene3D G3DSA:3.30.70.260 2 82 1.1E-8 T 11-10-2018 IX88_01740 34b37e1acaa03dde383fbe82e670edfd 407 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 179 397 4.2E-81 T 11-10-2018 IX88_01740 34b37e1acaa03dde383fbe82e670edfd 407 Gene3D G3DSA:3.40.50.1000 106 398 3.0E-85 T 11-10-2018 IPR023214 HAD superfamily IX88_01740 34b37e1acaa03dde383fbe82e670edfd 407 Pfam PF12710 haloacid dehalogenase-like hydrolase 195 362 2.1E-23 T 11-10-2018 IX88_01740 34b37e1acaa03dde383fbe82e670edfd 407 SUPERFAMILY SSF56784 190 397 4.14E-53 T 11-10-2018 IPR036412 HAD-like superfamily IX88_03885 dfa1a01819aaf61bd49c0b4288ab9b2c 333 Gene3D G3DSA:1.10.287.470 105 188 2.0E-10 T 11-10-2018 IX88_03885 dfa1a01819aaf61bd49c0b4288ab9b2c 333 Pfam PF13533 Biotin-lipoyl like 48 96 2.3E-12 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain IX88_03885 dfa1a01819aaf61bd49c0b4288ab9b2c 333 SUPERFAMILY SSF111369 47 249 4.45E-13 T 11-10-2018 IX88_03885 dfa1a01819aaf61bd49c0b4288ab9b2c 333 Gene3D G3DSA:1.10.287.470 82 104 4.9E-12 T 11-10-2018 IX88_03885 dfa1a01819aaf61bd49c0b4288ab9b2c 333 Gene3D G3DSA:2.40.50.100 49 81 4.9E-12 T 11-10-2018 IX88_03885 dfa1a01819aaf61bd49c0b4288ab9b2c 333 Pfam PF13437 HlyD family secretion protein 200 281 8.7E-12 T 11-10-2018 IX88_03885 dfa1a01819aaf61bd49c0b4288ab9b2c 333 Gene3D G3DSA:2.40.30.170 214 333 5.6E-25 T 11-10-2018 IX88_14475 acf1e5fde82d1c96a24668b47ccdaa07 486 Gene3D G3DSA:3.40.640.10 143 362 2.0E-88 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_14475 acf1e5fde82d1c96a24668b47ccdaa07 486 SUPERFAMILY SSF53383 96 469 1.69E-78 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_14475 acf1e5fde82d1c96a24668b47ccdaa07 486 Gene3D G3DSA:3.90.1150.10 99 466 2.0E-88 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_14475 acf1e5fde82d1c96a24668b47ccdaa07 486 SMART SM00345 7 66 8.6E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_14475 acf1e5fde82d1c96a24668b47ccdaa07 486 SUPERFAMILY SSF46785 3 76 5.79E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_14475 acf1e5fde82d1c96a24668b47ccdaa07 486 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 1.2E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_14475 acf1e5fde82d1c96a24668b47ccdaa07 486 Gene3D G3DSA:1.10.10.10 1 67 9.7E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_14475 acf1e5fde82d1c96a24668b47ccdaa07 486 Pfam PF00155 Aminotransferase class I and II 108 457 4.8E-26 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 IX88_17215 901927cf5ca75ef179883525936028b2 122 Pfam PF04304 Protein of unknown function (DUF454) 4 117 4.8E-35 T 11-10-2018 IPR007401 Protein of unknown function DUF454 IX88_17215 901927cf5ca75ef179883525936028b2 122 PIRSF PIRSF016789 1 122 3.0E-29 T 11-10-2018 IPR007401 Protein of unknown function DUF454 IX88_00740 57060d02f495580195dfbf90ca906c9c 851 Pfam PF17092 Penicillin-binding protein OB-like domain 325 419 2.6E-20 T 11-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_00740 57060d02f495580195dfbf90ca906c9c 851 Gene3D G3DSA:1.10.3810.10 55 249 5.5E-75 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_00740 57060d02f495580195dfbf90ca906c9c 851 SUPERFAMILY SSF53955 54 262 3.09E-75 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily IX88_00740 57060d02f495580195dfbf90ca906c9c 851 Pfam PF00905 Penicillin binding protein transpeptidase domain 424 596 5.1E-26 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 IX88_00740 57060d02f495580195dfbf90ca906c9c 851 Gene3D G3DSA:2.40.50.140 322 416 2.2E-30 T 11-10-2018 IX88_00740 57060d02f495580195dfbf90ca906c9c 851 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 74 750 2.7E-181 T 11-10-2018 IX88_00740 57060d02f495580195dfbf90ca906c9c 851 SUPERFAMILY SSF56601 217 759 6.76E-123 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like IX88_00740 57060d02f495580195dfbf90ca906c9c 851 Pfam PF00912 Transglycosylase 62 235 3.3E-61 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_07835 c32432bc06dfa11332374bfab800f33a 448 SUPERFAMILY SSF103473 8 439 1.7E-76 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_07835 c32432bc06dfa11332374bfab800f33a 448 Gene3D G3DSA:1.20.1250.20 15 431 6.5E-68 T 11-10-2018 IX88_07835 c32432bc06dfa11332374bfab800f33a 448 ProSitePatterns PS00217 Sugar transport proteins signature 2. 117 142 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_07835 c32432bc06dfa11332374bfab800f33a 448 Pfam PF07690 Major Facilitator Superfamily 26 363 3.2E-44 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_01885 51358903289620a4448551a9e25599c2 447 PIRSF PIRSF006603 1 445 4.8E-50 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 IX88_01885 51358903289620a4448551a9e25599c2 447 TIGRFAM TIGR00797 matE: MATE efflux family protein 10 420 2.7E-47 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 IX88_01885 51358903289620a4448551a9e25599c2 447 Pfam PF01554 MatE 10 168 6.7E-17 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 IX88_01885 51358903289620a4448551a9e25599c2 447 Pfam PF01554 MatE 237 390 1.5E-17 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 IX88_06110 eef021034c584cd1d96acbaa434d2684 593 Pfam PF14351 Domain of unknown function (DUF4401) 286 580 1.4E-11 T 11-10-2018 IPR025513 Domain of unknown function DUF4401 IX88_06110 eef021034c584cd1d96acbaa434d2684 593 Pfam PF09925 Predicted membrane protein (DUF2157) 7 115 4.3E-14 T 11-10-2018 IPR018677 Domain of unknown function DUF2157 IX88_06935 c052ce1a1c954bc0271c02354d3b1ffc 204 SUPERFAMILY SSF53056 3 203 1.96E-52 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 IX88_06935 c052ce1a1c954bc0271c02354d3b1ffc 204 Gene3D G3DSA:3.40.1050.10 1 204 3.7E-61 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 IX88_06935 c052ce1a1c954bc0271c02354d3b1ffc 204 Pfam PF00484 Carbonic anhydrase 45 199 2.5E-37 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 IX88_06935 c052ce1a1c954bc0271c02354d3b1ffc 204 SMART SM00947 38 203 1.9E-51 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 IX88_06935 c052ce1a1c954bc0271c02354d3b1ffc 204 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 50 57 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 IX88_18120 957d6ffde6dee13c5eb1c262575bffc8 197 Pfam PF03358 NADPH-dependent FMN reductase 12 125 1.6E-9 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 IX88_18120 957d6ffde6dee13c5eb1c262575bffc8 197 Gene3D G3DSA:3.40.50.360 1 197 1.4E-62 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_18120 957d6ffde6dee13c5eb1c262575bffc8 197 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 IX88_18120 957d6ffde6dee13c5eb1c262575bffc8 197 SUPERFAMILY SSF52218 4 196 9.3E-59 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_18120 957d6ffde6dee13c5eb1c262575bffc8 197 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 5 195 1.6E-45 T 11-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 IX88_14695 5b6ab06c03ee15668ea11c59693b1d9b 391 SUPERFAMILY SSF50156 269 372 4.99E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 IX88_14695 5b6ab06c03ee15668ea11c59693b1d9b 391 SUPERFAMILY SSF50494 58 281 7.91E-62 T 11-10-2018 IPR009003 Peptidase S1, PA clan IX88_14695 5b6ab06c03ee15668ea11c59693b1d9b 391 SMART SM00228 284 364 2.7E-18 T 11-10-2018 IPR001478 PDZ domain GO:0005515 IX88_14695 5b6ab06c03ee15668ea11c59693b1d9b 391 Gene3D G3DSA:2.40.10.120 58 277 5.8E-77 T 11-10-2018 IX88_14695 5b6ab06c03ee15668ea11c59693b1d9b 391 PRINTS PR00834 HtrA/DegQ protease family signature 216 233 1.1E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IX88_14695 5b6ab06c03ee15668ea11c59693b1d9b 391 PRINTS PR00834 HtrA/DegQ protease family signature 238 255 1.1E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IX88_14695 5b6ab06c03ee15668ea11c59693b1d9b 391 PRINTS PR00834 HtrA/DegQ protease family signature 142 162 1.1E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IX88_14695 5b6ab06c03ee15668ea11c59693b1d9b 391 PRINTS PR00834 HtrA/DegQ protease family signature 181 205 1.1E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IX88_14695 5b6ab06c03ee15668ea11c59693b1d9b 391 PRINTS PR00834 HtrA/DegQ protease family signature 121 133 1.1E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IX88_14695 5b6ab06c03ee15668ea11c59693b1d9b 391 PRINTS PR00834 HtrA/DegQ protease family signature 322 334 1.1E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IX88_14695 5b6ab06c03ee15668ea11c59693b1d9b 391 Pfam PF13180 PDZ domain 285 373 2.0E-15 T 11-10-2018 IPR001478 PDZ domain GO:0005515 IX88_14695 5b6ab06c03ee15668ea11c59693b1d9b 391 Gene3D G3DSA:2.30.42.10 279 385 2.5E-23 T 11-10-2018 IX88_14695 5b6ab06c03ee15668ea11c59693b1d9b 391 Pfam PF13365 Trypsin-like peptidase domain 112 245 1.4E-31 T 11-10-2018 IX88_09070 26f0ddeb153ff1a9e68ab3afa028077e 559 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 12 559 1.1E-302 T 11-10-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 IX88_09070 26f0ddeb153ff1a9e68ab3afa028077e 559 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 12 559 1.3E-291 T 11-10-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 IX88_09070 26f0ddeb153ff1a9e68ab3afa028077e 559 Gene3D G3DSA:3.40.1080.10 39 247 1.3E-16 T 11-10-2018 IX88_09070 26f0ddeb153ff1a9e68ab3afa028077e 559 SUPERFAMILY SSF100950 43 283 5.3E-32 T 11-10-2018 IPR037171 NagB/RpiA transferase-like IX88_09070 26f0ddeb153ff1a9e68ab3afa028077e 559 SUPERFAMILY SSF100950 231 497 2.81E-20 T 11-10-2018 IPR037171 NagB/RpiA transferase-like IX88_16925 3ec960100d64f6a4b2687f1e68fa457a 224 Gene3D G3DSA:1.10.10.10 126 223 1.3E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_16925 3ec960100d64f6a4b2687f1e68fa457a 224 SUPERFAMILY SSF52172 1 176 3.42E-38 T 11-10-2018 IPR011006 CheY-like superfamily IX88_16925 3ec960100d64f6a4b2687f1e68fa457a 224 SMART SM00448 2 112 3.9E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_16925 3ec960100d64f6a4b2687f1e68fa457a 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 1.1E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_16925 3ec960100d64f6a4b2687f1e68fa457a 224 Pfam PF00072 Response regulator receiver domain 4 112 1.5E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_16925 3ec960100d64f6a4b2687f1e68fa457a 224 SMART SM00862 150 221 2.2E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_16925 3ec960100d64f6a4b2687f1e68fa457a 224 Gene3D G3DSA:3.40.50.2300 1 122 2.3E-35 T 11-10-2018 IX88_12790 ab15362f5436ca7082c76ae64593ba23 192 SUPERFAMILY SSF48498 84 190 1.51E-14 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_12790 ab15362f5436ca7082c76ae64593ba23 192 Gene3D G3DSA:1.10.357.10 6 192 1.4E-26 T 11-10-2018 IX88_12790 ab15362f5436ca7082c76ae64593ba23 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 51 1.5E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_12790 ab15362f5436ca7082c76ae64593ba23 192 SUPERFAMILY SSF46689 4 69 1.08E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_04315 9e428cab2ae4150c0ef1fca18b94d176 231 SUPERFAMILY SSF46785 2 61 9.29E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_04315 9e428cab2ae4150c0ef1fca18b94d176 231 Pfam PF13280 WYL domain 136 226 2.5E-13 T 11-10-2018 IPR026881 WYL domain IX88_04315 9e428cab2ae4150c0ef1fca18b94d176 231 Pfam PF08279 HTH domain 6 60 7.2E-17 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 IX88_04315 9e428cab2ae4150c0ef1fca18b94d176 231 Gene3D G3DSA:1.10.10.10 1 63 3.1E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_03045 94b12579d392b38dd17e2e4359e55ecc 81 Pfam PF00137 ATP synthase subunit C 10 72 8.8E-9 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 IX88_03045 94b12579d392b38dd17e2e4359e55ecc 81 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.2E-7 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03045 94b12579d392b38dd17e2e4359e55ecc 81 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.2E-7 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03045 94b12579d392b38dd17e2e4359e55ecc 81 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.2E-7 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03045 94b12579d392b38dd17e2e4359e55ecc 81 Gene3D G3DSA:1.20.20.10 1 77 3.0E-27 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03045 94b12579d392b38dd17e2e4359e55ecc 81 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03045 94b12579d392b38dd17e2e4359e55ecc 81 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 1.2E-28 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 IX88_03045 94b12579d392b38dd17e2e4359e55ecc 81 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.695 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03045 94b12579d392b38dd17e2e4359e55ecc 81 SUPERFAMILY SSF81333 2 78 4.05E-18 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily IX88_13075 d5c3352065f6961ff8fe0d2cdf83b3a5 575 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 53 570 8.5E-229 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IX88_13075 d5c3352065f6961ff8fe0d2cdf83b3a5 575 Gene3D G3DSA:1.10.1160.10 285 363 5.1E-33 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 IX88_13075 d5c3352065f6961ff8fe0d2cdf83b3a5 575 Gene3D G3DSA:3.40.50.620 52 271 1.3E-102 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_13075 d5c3352065f6961ff8fe0d2cdf83b3a5 575 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 364 549 1.0E-57 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 IX88_13075 d5c3352065f6961ff8fe0d2cdf83b3a5 575 Gene3D G3DSA:2.40.240.10 364 567 1.8E-79 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 IX88_13075 d5c3352065f6961ff8fe0d2cdf83b3a5 575 SUPERFAMILY SSF50715 364 569 3.24E-70 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 IX88_13075 d5c3352065f6961ff8fe0d2cdf83b3a5 575 SUPERFAMILY SSF52374 52 370 3.66E-96 T 11-10-2018 IX88_13075 d5c3352065f6961ff8fe0d2cdf83b3a5 575 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 51 361 3.9E-108 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 IX88_13075 d5c3352065f6961ff8fe0d2cdf83b3a5 575 Gene3D G3DSA:3.90.800.10 125 233 1.3E-102 T 11-10-2018 IX88_13075 d5c3352065f6961ff8fe0d2cdf83b3a5 575 Gene3D G3DSA:2.40.240.10 372 486 1.8E-79 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 IX88_13075 d5c3352065f6961ff8fe0d2cdf83b3a5 575 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 7 570 50.488 T 11-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 IX88_13075 d5c3352065f6961ff8fe0d2cdf83b3a5 575 PRINTS PR00987 Glutamyl-tRNA synthetase signature 234 244 3.2E-7 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IX88_13075 d5c3352065f6961ff8fe0d2cdf83b3a5 575 PRINTS PR00987 Glutamyl-tRNA synthetase signature 55 67 3.2E-7 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IX88_13075 d5c3352065f6961ff8fe0d2cdf83b3a5 575 PRINTS PR00987 Glutamyl-tRNA synthetase signature 84 97 3.2E-7 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IX88_03580 95f7ff94c47e5284d04f275fe82ab048 209 SMART SM00240 22 72 2.4E-11 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 IX88_03580 95f7ff94c47e5284d04f275fe82ab048 209 Gene3D G3DSA:2.60.200.20 1 104 3.5E-25 T 11-10-2018 IX88_03580 95f7ff94c47e5284d04f275fe82ab048 209 SUPERFAMILY SSF49879 2 104 6.12E-25 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 IX88_03580 95f7ff94c47e5284d04f275fe82ab048 209 Pfam PF00498 FHA domain 24 86 1.4E-18 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 IX88_05040 9baf6c4e49e8f017c294ce6c178d4788 375 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 169 194 - T 11-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 IX88_05040 9baf6c4e49e8f017c294ce6c178d4788 375 Gene3D G3DSA:3.40.50.720 136 323 4.5E-132 T 11-10-2018 IX88_05040 9baf6c4e49e8f017c294ce6c178d4788 375 SUPERFAMILY SSF52283 1 167 2.55E-48 T 11-10-2018 IX88_05040 9baf6c4e49e8f017c294ce6c178d4788 375 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 371 3.2E-73 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain IX88_05040 9baf6c4e49e8f017c294ce6c178d4788 375 SMART SM01002 145 316 1.5E-76 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain IX88_05040 9baf6c4e49e8f017c294ce6c178d4788 375 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 11-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 IX88_05040 9baf6c4e49e8f017c294ce6c178d4788 375 SMART SM01003 4 136 5.0E-54 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal IX88_05040 9baf6c4e49e8f017c294ce6c178d4788 375 SUPERFAMILY SSF51735 136 321 1.38E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_05040 9baf6c4e49e8f017c294ce6c178d4788 375 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 2.0E-38 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal IX88_05040 9baf6c4e49e8f017c294ce6c178d4788 375 Gene3D G3DSA:3.40.50.720 3 369 4.5E-132 T 11-10-2018 IX88_00455 fbd855ddc79cbd4634a08c382850a514 264 SUPERFAMILY SSF53335 11 182 2.94E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_00455 fbd855ddc79cbd4634a08c382850a514 264 Pfam PF08241 Methyltransferase domain 49 136 4.9E-17 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 IX88_00455 fbd855ddc79cbd4634a08c382850a514 264 Gene3D G3DSA:3.40.50.150 11 242 9.8E-36 T 11-10-2018 IX88_18265 d62d98601d5b7b74164ddb0d4040b590 128 SUPERFAMILY SSF53137 15 128 5.89E-47 T 11-10-2018 IX88_18265 d62d98601d5b7b74164ddb0d4040b590 128 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 9 125 3.1E-54 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_18265 d62d98601d5b7b74164ddb0d4040b590 128 Pfam PF00411 Ribosomal protein S11 18 127 3.5E-50 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 IX88_18265 d62d98601d5b7b74164ddb0d4040b590 128 Gene3D G3DSA:3.30.420.80 1 128 5.2E-54 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 IX88_18265 d62d98601d5b7b74164ddb0d4040b590 128 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 128 32.395 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 IX88_18265 d62d98601d5b7b74164ddb0d4040b590 128 ProSitePatterns PS00054 Ribosomal protein S11 signature. 96 118 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site IX88_18265 d62d98601d5b7b74164ddb0d4040b590 128 PIRSF PIRSF002131 1 128 1.3E-51 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 IX88_00050 d62d98601d5b7b74164ddb0d4040b590 128 SUPERFAMILY SSF53137 15 128 5.89E-47 T 11-10-2018 IX88_00050 d62d98601d5b7b74164ddb0d4040b590 128 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 9 125 3.1E-54 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00050 d62d98601d5b7b74164ddb0d4040b590 128 Pfam PF00411 Ribosomal protein S11 18 127 3.5E-50 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 IX88_00050 d62d98601d5b7b74164ddb0d4040b590 128 Gene3D G3DSA:3.30.420.80 1 128 5.2E-54 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 IX88_00050 d62d98601d5b7b74164ddb0d4040b590 128 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 128 32.395 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 IX88_00050 d62d98601d5b7b74164ddb0d4040b590 128 ProSitePatterns PS00054 Ribosomal protein S11 signature. 96 118 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site IX88_00050 d62d98601d5b7b74164ddb0d4040b590 128 PIRSF PIRSF002131 1 128 1.3E-51 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 IX88_09640 180a70857023a3165c2ac0897e5f8c9b 361 Gene3D G3DSA:3.40.1350.30 39 182 3.3E-134 T 11-10-2018 IX88_09640 180a70857023a3165c2ac0897e5f8c9b 361 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 343 353 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site IX88_09640 180a70857023a3165c2ac0897e5f8c9b 361 Gene3D G3DSA:3.40.50.150 7 357 3.3E-134 T 11-10-2018 IX88_09640 180a70857023a3165c2ac0897e5f8c9b 361 SUPERFAMILY SSF53335 3 360 2.17E-54 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_09640 180a70857023a3165c2ac0897e5f8c9b 361 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 1 361 43.357 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 IX88_09640 180a70857023a3165c2ac0897e5f8c9b 361 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 294 323 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site IX88_09640 180a70857023a3165c2ac0897e5f8c9b 361 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 4 360 3.6E-167 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 IX88_09640 180a70857023a3165c2ac0897e5f8c9b 361 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 5 360 4.1E-164 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 IX88_08680 4f47634c08e034acff3375bccacbfd23 416 Pfam PF07690 Major Facilitator Superfamily 25 274 1.2E-40 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_08680 4f47634c08e034acff3375bccacbfd23 416 Gene3D G3DSA:1.20.1250.20 222 411 1.2E-29 T 11-10-2018 IX88_08680 4f47634c08e034acff3375bccacbfd23 416 ProSitePatterns PS00216 Sugar transport proteins signature 1. 286 303 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_08680 4f47634c08e034acff3375bccacbfd23 416 Gene3D G3DSA:1.20.1250.20 12 211 4.1E-37 T 11-10-2018 IX88_08680 4f47634c08e034acff3375bccacbfd23 416 SUPERFAMILY SSF103473 14 409 3.27E-81 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_00905 35ef0523c37af68d5b2f1d1edb5282c0 782 Pfam PF12836 Helix-hairpin-helix motif 482 546 7.2E-26 T 11-10-2018 IX88_00905 35ef0523c37af68d5b2f1d1edb5282c0 782 Gene3D G3DSA:1.10.3500.10 112 489 3.5E-134 T 11-10-2018 IPR023323 Tex-like domain superfamily IX88_00905 35ef0523c37af68d5b2f1d1edb5282c0 782 Pfam PF09371 Tex-like protein N-terminal domain 8 189 2.2E-54 T 11-10-2018 IPR018974 Tex-like protein, N-terminal IX88_00905 35ef0523c37af68d5b2f1d1edb5282c0 782 SUPERFAMILY SSF53098 312 460 4.48E-48 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_00905 35ef0523c37af68d5b2f1d1edb5282c0 782 Pfam PF00575 S1 RNA binding domain 640 711 1.3E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 IX88_00905 35ef0523c37af68d5b2f1d1edb5282c0 782 Gene3D G3DSA:1.10.10.650 1 108 2.5E-36 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily IX88_00905 35ef0523c37af68d5b2f1d1edb5282c0 782 Gene3D G3DSA:3.30.420.140 315 442 3.5E-134 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 IX88_00905 35ef0523c37af68d5b2f1d1edb5282c0 782 Pfam PF16921 Tex protein YqgF-like domain 317 442 6.4E-50 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain IX88_00905 35ef0523c37af68d5b2f1d1edb5282c0 782 SUPERFAMILY SSF158832 1 311 3.53E-88 T 11-10-2018 IX88_00905 35ef0523c37af68d5b2f1d1edb5282c0 782 SUPERFAMILY SSF47781 552 623 2.89E-19 T 11-10-2018 IPR010994 RuvA domain 2-like IX88_00905 35ef0523c37af68d5b2f1d1edb5282c0 782 SUPERFAMILY SSF47781 461 549 1.45E-26 T 11-10-2018 IPR010994 RuvA domain 2-like IX88_00905 35ef0523c37af68d5b2f1d1edb5282c0 782 SMART SM00316 640 711 1.9E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 IX88_00905 35ef0523c37af68d5b2f1d1edb5282c0 782 Gene3D G3DSA:1.10.150.310 490 621 8.3E-49 T 11-10-2018 IX88_00905 35ef0523c37af68d5b2f1d1edb5282c0 782 SMART SM00732 316 415 4.2E-31 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 IX88_00905 35ef0523c37af68d5b2f1d1edb5282c0 782 SUPERFAMILY SSF50249 628 717 3.86E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_00905 35ef0523c37af68d5b2f1d1edb5282c0 782 Gene3D G3DSA:2.40.50.140 622 715 1.2E-29 T 11-10-2018 IX88_10370 9040d3164e75d9af4f1f70f51beae072 109 Gene3D G3DSA:3.30.1310.10 1 109 5.8E-35 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily IX88_10370 9040d3164e75d9af4f1f70f51beae072 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 1 98 21.709 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family IX88_10370 9040d3164e75d9af4f1f70f51beae072 109 Pfam PF02575 YbaB/EbfC DNA-binding family 7 99 3.9E-30 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family IX88_10370 9040d3164e75d9af4f1f70f51beae072 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 105 3.7E-25 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family IX88_10370 9040d3164e75d9af4f1f70f51beae072 109 SUPERFAMILY SSF82607 7 103 1.05E-29 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily IX88_10370 9040d3164e75d9af4f1f70f51beae072 109 PIRSF PIRSF004555 1 109 2.3E-32 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family IX88_00280 354df0d70492845f664ba9e386960430 272 Gene3D G3DSA:3.40.50.300 10 264 5.9E-68 T 11-10-2018 IX88_00280 354df0d70492845f664ba9e386960430 272 Pfam PF00005 ABC transporter 28 177 2.3E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_00280 354df0d70492845f664ba9e386960430 272 SUPERFAMILY SSF52540 12 238 1.9E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_00280 354df0d70492845f664ba9e386960430 272 SMART SM00382 37 234 6.4E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_15890 ce3922907fa79d3f580de99360cd621a 273 SUPERFAMILY SSF51161 2 256 7.21E-73 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily IX88_15890 ce3922907fa79d3f580de99360cd621a 273 Gene3D G3DSA:1.10.166.10 1 70 1.4E-28 T 11-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 IX88_15890 ce3922907fa79d3f580de99360cd621a 273 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 8.0E-25 T 11-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 IX88_15890 ce3922907fa79d3f580de99360cd621a 273 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 3.5E-13 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_15890 ce3922907fa79d3f580de99360cd621a 273 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 272 3.0E-147 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 IX88_15890 ce3922907fa79d3f580de99360cd621a 273 Gene3D G3DSA:2.160.10.10 87 257 3.7E-55 T 11-10-2018 IX88_15890 ce3922907fa79d3f580de99360cd621a 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0014 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_15890 ce3922907fa79d3f580de99360cd621a 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 IX88_15890 ce3922907fa79d3f580de99360cd621a 273 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 57.401 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 IX88_02840 fda3792a0cdd3d47ea2231b149346186 341 Pfam PF16113 Enoyl-CoA hydratase/isomerase 16 330 1.4E-98 T 11-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 IX88_02840 fda3792a0cdd3d47ea2231b149346186 341 Gene3D G3DSA:3.90.226.10 3 340 2.5E-99 T 11-10-2018 IX88_02840 fda3792a0cdd3d47ea2231b149346186 341 SUPERFAMILY SSF52096 3 326 2.85E-63 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_07725 ec3ad3a1d5c25ca9ea27e35492e30b4b 486 Pfam PF00171 Aldehyde dehydrogenase family 3 449 1.9E-81 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_07725 ec3ad3a1d5c25ca9ea27e35492e30b4b 486 SUPERFAMILY SSF53720 9 474 5.63E-109 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_07725 ec3ad3a1d5c25ca9ea27e35492e30b4b 486 PIRSF PIRSF036492 2 484 1.1E-160 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 IX88_07725 ec3ad3a1d5c25ca9ea27e35492e30b4b 486 Gene3D G3DSA:3.40.309.10 227 429 8.0E-150 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_07725 ec3ad3a1d5c25ca9ea27e35492e30b4b 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 223 230 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 IX88_07725 ec3ad3a1d5c25ca9ea27e35492e30b4b 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 251 262 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 IX88_07725 ec3ad3a1d5c25ca9ea27e35492e30b4b 486 Gene3D G3DSA:3.40.605.10 27 449 8.0E-150 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_00290 cd9e05a122bad57570c572fe19d39863 615 Gene3D G3DSA:3.40.50.300 1 220 5.0E-71 T 11-10-2018 IX88_00290 cd9e05a122bad57570c572fe19d39863 615 Pfam PF00271 Helicase conserved C-terminal domain 250 349 2.1E-25 T 11-10-2018 IPR001650 Helicase, C-terminal IX88_00290 cd9e05a122bad57570c572fe19d39863 615 SMART SM00490 268 349 3.8E-32 T 11-10-2018 IPR001650 Helicase, C-terminal IX88_00290 cd9e05a122bad57570c572fe19d39863 615 SUPERFAMILY SSF52540 84 370 3.36E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_00290 cd9e05a122bad57570c572fe19d39863 615 Gene3D G3DSA:3.40.50.300 222 389 1.2E-47 T 11-10-2018 IX88_00290 cd9e05a122bad57570c572fe19d39863 615 SMART SM00487 22 231 3.9E-54 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain IX88_00290 cd9e05a122bad57570c572fe19d39863 615 Pfam PF00270 DEAD/DEAH box helicase 27 201 3.2E-45 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 IX88_00290 cd9e05a122bad57570c572fe19d39863 615 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 162 170 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site IX88_02845 36ec17d48ee5665ccbff9eac984431f5 450 SUPERFAMILY SSF103473 17 429 4.97E-64 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_02845 36ec17d48ee5665ccbff9eac984431f5 450 Pfam PF07690 Major Facilitator Superfamily 63 390 4.8E-29 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_02845 36ec17d48ee5665ccbff9eac984431f5 450 Gene3D G3DSA:1.20.1250.20 19 439 2.8E-59 T 11-10-2018 IX88_11685 149b8620d3d2af262ba06f2aef0502d2 238 SUPERFAMILY SSF52266 44 234 1.83E-32 T 11-10-2018 IX88_11685 149b8620d3d2af262ba06f2aef0502d2 238 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 50 222 3.6E-15 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain IX88_11685 149b8620d3d2af262ba06f2aef0502d2 238 Gene3D G3DSA:3.40.50.1110 18 238 1.4E-25 T 11-10-2018 IPR036514 SGNH hydrolase superfamily IX88_01815 eade1574ca963677783f82ba3d4866a9 512 Pfam PF00221 Aromatic amino acid lyase 10 469 2.2E-187 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 IX88_01815 eade1574ca963677783f82ba3d4866a9 512 SUPERFAMILY SSF48557 3 505 7.22E-194 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 IX88_01815 eade1574ca963677783f82ba3d4866a9 512 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 138 154 - T 11-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 IX88_01815 eade1574ca963677783f82ba3d4866a9 512 Gene3D G3DSA:1.20.200.10 197 508 3.7E-128 T 11-10-2018 IX88_01815 eade1574ca963677783f82ba3d4866a9 512 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 500 2.3E-221 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 IX88_01815 eade1574ca963677783f82ba3d4866a9 512 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 2 503 45.011 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 IX88_01815 eade1574ca963677783f82ba3d4866a9 512 Gene3D G3DSA:1.10.275.10 1 196 1.5E-69 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal IX88_03290 32135dd396a027f1bc1cc4616a789ab9 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 4.8E-52 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 IX88_03290 32135dd396a027f1bc1cc4616a789ab9 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 IX88_03290 32135dd396a027f1bc1cc4616a789ab9 175 Gene3D G3DSA:3.90.80.10 1 175 1.7E-71 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 IX88_03290 32135dd396a027f1bc1cc4616a789ab9 175 SUPERFAMILY SSF50324 3 174 5.49E-67 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 IX88_03290 32135dd396a027f1bc1cc4616a789ab9 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.615 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 IX88_15360 f95873ef660cafb90e1048539409f6b1 255 Gene3D G3DSA:3.40.1210.10 1 254 8.1E-83 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 IX88_15360 f95873ef660cafb90e1048539409f6b1 255 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 2 242 8.2E-67 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 IX88_15360 f95873ef660cafb90e1048539409f6b1 255 Pfam PF01975 Survival protein SurE 3 186 2.0E-56 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 IX88_15360 f95873ef660cafb90e1048539409f6b1 255 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 255 34.872 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 IX88_15360 f95873ef660cafb90e1048539409f6b1 255 SUPERFAMILY SSF64167 2 252 9.29E-76 T 11-10-2018 IX88_09855 30204545a029f896c3d4f25fab163c9b 237 SMART SM00987 62 223 7.2E-36 T 11-10-2018 IX88_09855 30204545a029f896c3d4f25fab163c9b 237 SUPERFAMILY SSF52141 15 235 5.45E-91 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 IX88_09855 30204545a029f896c3d4f25fab163c9b 237 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 18 227 2.4E-84 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 IX88_09855 30204545a029f896c3d4f25fab163c9b 237 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 17 234 40.59 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 IX88_09855 30204545a029f896c3d4f25fab163c9b 237 Pfam PF03167 Uracil DNA glycosylase superfamily 67 222 1.4E-24 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 IX88_09855 30204545a029f896c3d4f25fab163c9b 237 SMART SM00986 62 223 7.2E-36 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 IX88_09855 30204545a029f896c3d4f25fab163c9b 237 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 70 79 - T 11-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 IX88_09855 30204545a029f896c3d4f25fab163c9b 237 Gene3D G3DSA:3.40.470.10 1 237 3.1E-100 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 IX88_01445 140d7311c30006b5938e31205e422df3 420 Gene3D G3DSA:3.30.420.40 11 375 2.2E-83 T 11-10-2018 IX88_01445 140d7311c30006b5938e31205e422df3 420 PIRSF PIRSF003101 1 420 1.4E-101 T 11-10-2018 IPR020823 Cell division protein FtsA IX88_01445 140d7311c30006b5938e31205e422df3 420 Gene3D G3DSA:3.30.420.40 198 351 2.2E-83 T 11-10-2018 IX88_01445 140d7311c30006b5938e31205e422df3 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 380 3.9E-90 T 11-10-2018 IPR020823 Cell division protein FtsA IX88_01445 140d7311c30006b5938e31205e422df3 420 Gene3D G3DSA:3.90.640.10 236 299 2.2E-83 T 11-10-2018 IX88_01445 140d7311c30006b5938e31205e422df3 420 SMART SM00842 8 197 1.8E-61 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 IX88_01445 140d7311c30006b5938e31205e422df3 420 Pfam PF14450 Cell division protein FtsA 9 172 9.2E-9 T 11-10-2018 IX88_01445 140d7311c30006b5938e31205e422df3 420 Pfam PF14450 Cell division protein FtsA 208 377 9.4E-19 T 11-10-2018 IX88_01445 140d7311c30006b5938e31205e422df3 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 1.1E-6 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 IX88_01445 140d7311c30006b5938e31205e422df3 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 4 420 22.18 T 11-10-2018 IPR020823 Cell division protein FtsA IX88_01445 140d7311c30006b5938e31205e422df3 420 SUPERFAMILY SSF53067 199 380 8.84E-35 T 11-10-2018 IX88_01445 140d7311c30006b5938e31205e422df3 420 Gene3D G3DSA:3.30.1490.110 83 170 2.2E-83 T 11-10-2018 IX88_01445 140d7311c30006b5938e31205e422df3 420 SUPERFAMILY SSF53067 8 198 1.44E-36 T 11-10-2018 IX88_01695 425954f2d33ed14be4dd2527293011a0 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 227 2.5E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_01695 425954f2d33ed14be4dd2527293011a0 236 SUPERFAMILY SSF52172 5 130 5.27E-40 T 11-10-2018 IPR011006 CheY-like superfamily IX88_01695 425954f2d33ed14be4dd2527293011a0 236 Gene3D G3DSA:1.10.10.10 132 231 9.0E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_01695 425954f2d33ed14be4dd2527293011a0 236 SMART SM00862 152 227 6.3E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_01695 425954f2d33ed14be4dd2527293011a0 236 SMART SM00448 4 118 3.7E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_01695 425954f2d33ed14be4dd2527293011a0 236 Pfam PF00072 Response regulator receiver domain 6 119 4.4E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_01695 425954f2d33ed14be4dd2527293011a0 236 Gene3D G3DSA:3.40.50.2300 2 131 2.5E-36 T 11-10-2018 IX88_01695 425954f2d33ed14be4dd2527293011a0 236 SUPERFAMILY SSF46894 130 228 5.1E-29 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 IX88_01695 425954f2d33ed14be4dd2527293011a0 236 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 4 228 2.5E-101 T 11-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 IX88_06635 d973a43932490e7e5e457a0ec028207b 546 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 37 524 49.334 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 IX88_06635 d973a43932490e7e5e457a0ec028207b 546 Gene3D G3DSA:3.50.50.60 205 276 4.6E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_06635 d973a43932490e7e5e457a0ec028207b 546 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 41 522 2.9E-191 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 IX88_06635 d973a43932490e7e5e457a0ec028207b 546 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 41 524 1.9E-218 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 IX88_06635 d973a43932490e7e5e457a0ec028207b 546 SUPERFAMILY SSF51905 39 360 1.58E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_01385 bb8c0f91fcec315bfd6c013d44019802 488 Pfam PF00571 CBS domain 157 203 8.7E-4 T 11-10-2018 IPR000644 CBS domain IX88_01385 bb8c0f91fcec315bfd6c013d44019802 488 Pfam PF00571 CBS domain 89 137 6.6E-11 T 11-10-2018 IPR000644 CBS domain IX88_01385 bb8c0f91fcec315bfd6c013d44019802 488 SUPERFAMILY SSF54631 93 202 1.02E-26 T 11-10-2018 IX88_01385 bb8c0f91fcec315bfd6c013d44019802 488 Gene3D G3DSA:3.20.20.70 2 487 2.3E-207 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_01385 bb8c0f91fcec315bfd6c013d44019802 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 474 1.8E-159 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 IX88_01385 bb8c0f91fcec315bfd6c013d44019802 488 PIRSF PIRSF000130 1 488 3.0E-202 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 IX88_01385 bb8c0f91fcec315bfd6c013d44019802 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 487 82.775 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 IX88_01385 bb8c0f91fcec315bfd6c013d44019802 488 SUPERFAMILY SSF51412 2 478 1.83E-125 T 11-10-2018 IX88_01385 bb8c0f91fcec315bfd6c013d44019802 488 SMART SM00116 96 143 2.7E-9 T 11-10-2018 IPR000644 CBS domain IX88_01385 bb8c0f91fcec315bfd6c013d44019802 488 SMART SM00116 157 205 1.7E-5 T 11-10-2018 IPR000644 CBS domain IX88_01385 bb8c0f91fcec315bfd6c013d44019802 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 IX88_01385 bb8c0f91fcec315bfd6c013d44019802 488 SMART SM01240 7 474 0.0 T 11-10-2018 IX88_01385 bb8c0f91fcec315bfd6c013d44019802 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 456 1.4E-186 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 IX88_12505 2b45939db2bb9603ffc7ddb5c033905f 368 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 155 268 6.0E-18 T 11-10-2018 IPR006528 Phage head morphogenesis domain IX88_12505 2b45939db2bb9603ffc7ddb5c033905f 368 Pfam PF04233 Phage Mu protein F like protein 152 264 9.8E-13 T 11-10-2018 IPR006528 Phage head morphogenesis domain IX88_03510 a1b00c636c5b473c5d1225172289baef 240 Gene3D G3DSA:1.20.58.220 122 234 2.8E-32 T 11-10-2018 IPR038078 PhoU-like domain superfamily IX88_03510 a1b00c636c5b473c5d1225172289baef 240 SUPERFAMILY SSF109755 14 234 3.56E-64 T 11-10-2018 IX88_03510 a1b00c636c5b473c5d1225172289baef 240 Pfam PF01895 PhoU domain 29 114 3.5E-16 T 11-10-2018 IPR026022 PhoU domain IX88_03510 a1b00c636c5b473c5d1225172289baef 240 Pfam PF01895 PhoU domain 132 216 5.2E-16 T 11-10-2018 IPR026022 PhoU domain IX88_03510 a1b00c636c5b473c5d1225172289baef 240 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 14 222 2.7E-64 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 IX88_03510 a1b00c636c5b473c5d1225172289baef 240 PIRSF PIRSF003107 9 230 5.2E-64 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 IX88_03510 a1b00c636c5b473c5d1225172289baef 240 Gene3D G3DSA:1.20.58.220 4 121 2.8E-38 T 11-10-2018 IPR038078 PhoU-like domain superfamily IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1277 20.297 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 Gene3D G3DSA:1.10.8.750 147 207 6.4E-28 T 11-10-2018 IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 Gene3D G3DSA:3.30.1330.10 608 799 4.6E-27 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 SUPERFAMILY SSF82697 1 145 2.25E-31 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1022 1276 3.2E-105 T 11-10-2018 IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 Gene3D G3DSA:3.90.650.10 800 964 6.8E-20 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 Gene3D G3DSA:3.90.650.10 415 599 2.5E-59 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 SUPERFAMILY SSF56042 816 1015 7.78E-42 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 SMART SM01211 1022 1276 2.5E-155 T 11-10-2018 IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 Pfam PF02769 AIR synthase related protein, C-terminal domain 424 582 1.2E-30 T 11-10-2018 IPR010918 PurM-like, C-terminal domain IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 Pfam PF02769 AIR synthase related protein, C-terminal domain 862 955 7.9E-7 T 11-10-2018 IPR010918 PurM-like, C-terminal domain IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 Gene3D G3DSA:3.40.50.880 965 1277 4.9E-134 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 SUPERFAMILY SSF56042 421 648 8.52E-51 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 SUPERFAMILY SSF52317 1019 1276 2.21E-95 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 5 1275 0.0 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 SUPERFAMILY SSF55326 215 420 5.93E-61 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 SUPERFAMILY SSF109736 149 214 1.7E-21 T 11-10-2018 IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 Gene3D G3DSA:3.30.1330.10 208 414 3.2E-42 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily IX88_15950 c8720c3bd3392bc7f10b034844a75ddd 1277 SUPERFAMILY SSF55326 611 809 9.42E-69 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 2495 2534 1.7E-7 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1211 1251 8.5E-11 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 2347 2385 2.8E-9 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1683 1723 1.7E-7 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 770 814 5.3E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 2162 2201 6.2E-9 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 908 952 1.0E-9 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1528 1568 1.7E-7 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1373 1413 2.1E-8 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 618 662 3.3E-11 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 2410 2453 2.8E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1060 1104 9.3E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 2000 2040 1.7E-7 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 298 336 7.2E-8 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1845 1885 2.1E-8 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 466 510 2.8E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:2.20.25.490 2060 2127 7.5E-12 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:2.20.25.490 1743 1810 7.5E-12 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:2.20.25.490 1271 1338 7.5E-12 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:3.30.390.90 2300 2352 6.6E-10 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:3.30.390.90 1339 1378 9.3E-15 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:3.30.390.90 1027 1065 3.6E-15 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:3.30.390.90 1811 1850 1.6E-14 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:3.30.390.90 585 623 5.6E-16 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:3.30.390.90 737 775 8.6E-15 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:3.30.390.90 2128 2165 9.3E-15 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:3.30.390.90 1178 1216 3.2E-16 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:3.30.390.90 875 913 3.6E-15 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:2.150.10.10 78 190 1.7E-8 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:1.20.5.170 2166 2259 3.1E-14 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:1.20.5.170 2491 2596 2.5E-17 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 1.8E-10 T 11-10-2018 IPR024973 ESPR domain IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:2.150.10.10 1553 1708 3.0E-17 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:2.150.10.10 1395 1552 2.0E-17 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:2.150.10.10 191 322 3.5E-19 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:2.150.10.10 323 494 9.8E-20 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:2.150.10.10 1868 2025 2.8E-17 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 SUPERFAMILY SSF101967 168 322 6.8E-21 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:1.20.5.170 2412 2460 1.1E-9 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:1.20.5.170 1066 1091 3.0E-10 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:1.20.5.170 914 939 3.0E-10 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:1.20.5.170 776 801 3.0E-10 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Gene3D G3DSA:1.20.5.170 624 649 6.0E-10 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF03895 YadA-like membrane anchor domain 2615 2667 9.3E-7 T 11-10-2018 IPR005594 YadA-like, C-terminal IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 SUPERFAMILY SSF101967 1272 1395 5.49E-7 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 SUPERFAMILY SSF101967 2060 2184 1.57E-6 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 SUPERFAMILY SSF101967 93 170 8.37E-5 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 Pfam PF05658 Head domain of trimeric autotransporter adhesin 240 265 4.5E-5 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 SUPERFAMILY SSF101967 1743 1867 1.23E-6 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 SUPERFAMILY SSF101967 1097 1233 5.49E-8 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 SUPERFAMILY SSF54523 2510 2667 1.4E-15 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 SUPERFAMILY SSF101967 650 797 1.31E-6 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 SUPERFAMILY SSF101967 823 935 1.7E-7 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 SUPERFAMILY SSF101967 498 645 7.32E-8 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 SUPERFAMILY SSF101967 940 1087 2.62E-6 T 11-10-2018 IX88_07190 cdf2bc038b0ee389f6538858decf0cdf 2671 SUPERFAMILY SSF101967 2197 2369 2.35E-6 T 11-10-2018 IX88_17175 5c5be8e1027e25d6ea0ff96c2260e8bd 261 Gene3D G3DSA:3.40.50.620 135 237 2.2E-9 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_17175 5c5be8e1027e25d6ea0ff96c2260e8bd 261 Pfam PF02698 DUF218 domain 105 250 3.0E-28 T 11-10-2018 IPR003848 Domain of unknown function DUF218 IX88_12930 96269d90c790f9d62b28bde8a9d46c4f 756 SUPERFAMILY SSF56935 56 756 2.05E-85 T 11-10-2018 IX88_12930 96269d90c790f9d62b28bde8a9d46c4f 756 Gene3D G3DSA:2.40.170.20 195 755 4.3E-56 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IX88_12930 96269d90c790f9d62b28bde8a9d46c4f 756 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 171 2.9E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_12930 96269d90c790f9d62b28bde8a9d46c4f 756 Pfam PF00593 TonB dependent receptor 265 731 2.7E-34 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_12930 96269d90c790f9d62b28bde8a9d46c4f 756 Gene3D G3DSA:2.170.130.10 45 176 1.9E-16 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_12930 96269d90c790f9d62b28bde8a9d46c4f 756 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 91 738 1.4E-71 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 IX88_11495 c04625a0181f6d2e33febc174748a068 388 PIRSF PIRSF016578 2 386 2.8E-88 T 11-10-2018 IX88_11495 c04625a0181f6d2e33febc174748a068 388 Gene3D G3DSA:1.10.540.10 11 117 3.5E-20 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_11495 c04625a0181f6d2e33febc174748a068 388 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 237 366 1.2E-21 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain IX88_11495 c04625a0181f6d2e33febc174748a068 388 SUPERFAMILY SSF56645 21 212 1.18E-21 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_11495 c04625a0181f6d2e33febc174748a068 388 Gene3D G3DSA:2.40.110.10 119 211 7.4E-21 T 11-10-2018 IX88_11495 c04625a0181f6d2e33febc174748a068 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 31 95 7.5E-5 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_11495 c04625a0181f6d2e33febc174748a068 388 SUPERFAMILY SSF47203 230 370 1.9E-11 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_11495 c04625a0181f6d2e33febc174748a068 388 Gene3D G3DSA:1.20.140.10 213 386 3.1E-27 T 11-10-2018 IX88_17750 b6d6b6b5d75c35ffeaf2b1d4fcc2abc8 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 101 1.6E-25 T 11-10-2018 IPR003849 Preprotein translocase YajC IX88_17750 b6d6b6b5d75c35ffeaf2b1d4fcc2abc8 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 41 59 2.4E-12 T 11-10-2018 IPR003849 Preprotein translocase YajC IX88_17750 b6d6b6b5d75c35ffeaf2b1d4fcc2abc8 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 2.4E-12 T 11-10-2018 IPR003849 Preprotein translocase YajC IX88_17750 b6d6b6b5d75c35ffeaf2b1d4fcc2abc8 109 Pfam PF02699 Preprotein translocase subunit 24 97 2.4E-26 T 11-10-2018 IPR003849 Preprotein translocase YajC IX88_17750 b6d6b6b5d75c35ffeaf2b1d4fcc2abc8 109 SMART SM01323 19 101 1.8E-36 T 11-10-2018 IPR003849 Preprotein translocase YajC IX88_06195 675ab9147a185ffbb72f9199124e2d6e 245 SUPERFAMILY SSF64438 27 244 1.39E-66 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic IX88_06195 675ab9147a185ffbb72f9199124e2d6e 245 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 29 243 4.1E-61 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase IX88_06195 675ab9147a185ffbb72f9199124e2d6e 245 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 29 245 8.4E-52 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase IX88_06195 675ab9147a185ffbb72f9199124e2d6e 245 Gene3D G3DSA:3.60.140.10 17 245 2.2E-68 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily IX88_09835 f50eda4d4dfa7ab048349a16538b9825 126 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 3.1E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_09835 f50eda4d4dfa7ab048349a16538b9825 126 TIGRFAM TIGR01707 gspI: type II secretion system protein I 5 100 2.9E-14 T 11-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 IX88_09835 f50eda4d4dfa7ab048349a16538b9825 126 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_09835 f50eda4d4dfa7ab048349a16538b9825 126 SUPERFAMILY SSF54523 42 108 3.24E-13 T 11-10-2018 IX88_09835 f50eda4d4dfa7ab048349a16538b9825 126 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.4E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_09835 f50eda4d4dfa7ab048349a16538b9825 126 Gene3D G3DSA:3.30.1300.30 33 120 4.9E-10 T 11-10-2018 IX88_09835 f50eda4d4dfa7ab048349a16538b9825 126 Pfam PF02501 Type II secretion system (T2SS), protein I 42 103 2.0E-9 T 11-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 IX88_16475 15ec5721fbff04124f40c48d0a56b836 124 Gene3D G3DSA:1.10.3830.10 8 124 8.1E-36 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 IX88_16475 15ec5721fbff04124f40c48d0a56b836 124 Pfam PF01219 Prokaryotic diacylglycerol kinase 21 122 5.8E-32 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 IX88_10635 36d20971476837b8bcec4907ac78b133 133 Pfam PF07681 DoxX 15 97 2.4E-11 T 11-10-2018 IPR032808 DoxX family IX88_07675 94471ba17bd23936c65a3a1172c7ad33 443 Gene3D G3DSA:1.20.1740.10 6 442 3.0E-65 T 11-10-2018 IX88_07675 94471ba17bd23936c65a3a1172c7ad33 443 Pfam PF00324 Amino acid permease 16 377 2.2E-30 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 IX88_07675 94471ba17bd23936c65a3a1172c7ad33 443 PIRSF PIRSF006060 1 439 6.8E-58 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_01015 103531040fb20db9010d4fbfd9d6f67f 229 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 228 33.858 T 11-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 IX88_01015 103531040fb20db9010d4fbfd9d6f67f 229 Pfam PF00230 Major intrinsic protein 2 221 1.5E-50 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 IX88_01015 103531040fb20db9010d4fbfd9d6f67f 229 SUPERFAMILY SSF81338 2 225 2.62E-66 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 IX88_01015 103531040fb20db9010d4fbfd9d6f67f 229 PRINTS PR00783 Major intrinsic protein family signature 135 153 2.6E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 IX88_01015 103531040fb20db9010d4fbfd9d6f67f 229 PRINTS PR00783 Major intrinsic protein family signature 42 66 2.6E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 IX88_01015 103531040fb20db9010d4fbfd9d6f67f 229 PRINTS PR00783 Major intrinsic protein family signature 165 187 2.6E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 IX88_01015 103531040fb20db9010d4fbfd9d6f67f 229 PRINTS PR00783 Major intrinsic protein family signature 79 98 2.6E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 IX88_01015 103531040fb20db9010d4fbfd9d6f67f 229 PRINTS PR00783 Major intrinsic protein family signature 204 224 2.6E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 IX88_01015 103531040fb20db9010d4fbfd9d6f67f 229 PRINTS PR00783 Major intrinsic protein family signature 2 21 2.6E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 IX88_01015 103531040fb20db9010d4fbfd9d6f67f 229 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 221 4.7E-58 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 IX88_01015 103531040fb20db9010d4fbfd9d6f67f 229 Gene3D G3DSA:1.20.1080.10 1 228 1.3E-82 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 IX88_01015 103531040fb20db9010d4fbfd9d6f67f 229 ProSitePatterns PS00221 MIP family signature. 60 68 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 IX88_07775 47534713b6dee7e3975a1bbcfb5d62c4 129 SUPERFAMILY SSF54637 5 129 6.08E-26 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_07775 47534713b6dee7e3975a1bbcfb5d62c4 129 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 12 123 2.9E-12 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 IX88_07775 47534713b6dee7e3975a1bbcfb5d62c4 129 Pfam PF03061 Thioesterase superfamily 45 115 9.9E-12 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 IX88_07775 47534713b6dee7e3975a1bbcfb5d62c4 129 Gene3D G3DSA:3.10.129.10 2 129 1.1E-25 T 11-10-2018 IX88_15535 a00fd85607d4f15cae6cd3f3f64efb10 487 Pfam PF01928 CYTH domain 1 194 5.5E-20 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 IX88_15535 a00fd85607d4f15cae6cd3f3f64efb10 487 Gene3D G3DSA:2.40.320.10 1 197 3.8E-34 T 11-10-2018 IX88_15535 a00fd85607d4f15cae6cd3f3f64efb10 487 SMART SM00880 228 480 3.9E-56 T 11-10-2018 IPR007899 CHAD domain IX88_15535 a00fd85607d4f15cae6cd3f3f64efb10 487 SMART SM01118 1 202 5.5E-33 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 IX88_15535 a00fd85607d4f15cae6cd3f3f64efb10 487 SUPERFAMILY SSF55154 1 211 1.05E-36 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 IX88_15535 a00fd85607d4f15cae6cd3f3f64efb10 487 Pfam PF05235 CHAD domain 231 445 1.7E-36 T 11-10-2018 IPR007899 CHAD domain IX88_15535 a00fd85607d4f15cae6cd3f3f64efb10 487 Gene3D G3DSA:1.40.20.10 208 486 6.2E-48 T 11-10-2018 IPR038186 CHAD domain superfamily IX88_16610 4ba573ea82e1fe09bd32e31f945e67e2 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.8E-31 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 IX88_16610 4ba573ea82e1fe09bd32e31f945e67e2 158 SUPERFAMILY SSF54534 82 157 8.11E-25 T 11-10-2018 IX88_16610 4ba573ea82e1fe09bd32e31f945e67e2 158 Gene3D G3DSA:3.10.50.30 76 158 3.4E-32 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 IX88_16610 4ba573ea82e1fe09bd32e31f945e67e2 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 3.3E-59 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 IX88_16610 4ba573ea82e1fe09bd32e31f945e67e2 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 IX88_16610 4ba573ea82e1fe09bd32e31f945e67e2 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 157 1.1E-29 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 IX88_16610 4ba573ea82e1fe09bd32e31f945e67e2 158 SUPERFAMILY SSF46557 3 78 2.22E-28 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 IX88_16610 4ba573ea82e1fe09bd32e31f945e67e2 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 IX88_16610 4ba573ea82e1fe09bd32e31f945e67e2 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.168 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 IX88_16610 4ba573ea82e1fe09bd32e31f945e67e2 158 PIRSF PIRSF006092 1 158 4.5E-55 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 IX88_16610 4ba573ea82e1fe09bd32e31f945e67e2 158 Gene3D G3DSA:1.10.287.180 1 75 2.4E-31 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 IX88_07090 2dcffb3ee53bbe97770ebb33647ae5ae 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 294 311 3.4E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07090 2dcffb3ee53bbe97770ebb33647ae5ae 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 333 349 3.4E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07090 2dcffb3ee53bbe97770ebb33647ae5ae 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 400 415 3.4E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07090 2dcffb3ee53bbe97770ebb33647ae5ae 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 426 439 3.4E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07090 2dcffb3ee53bbe97770ebb33647ae5ae 566 ProSitePatterns PS01120 Urease nickel ligands signature. 126 139 - T 11-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07090 2dcffb3ee53bbe97770ebb33647ae5ae 566 Pfam PF01979 Amidohydrolase family 124 453 1.3E-81 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 IX88_07090 2dcffb3ee53bbe97770ebb33647ae5ae 566 Pfam PF00449 Urease alpha-subunit, N-terminal domain 1 118 4.6E-55 T 11-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07090 2dcffb3ee53bbe97770ebb33647ae5ae 566 SUPERFAMILY SSF51338 2 176 1.51E-61 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 IX88_07090 2dcffb3ee53bbe97770ebb33647ae5ae 566 Gene3D G3DSA:3.20.20.140 128 566 9.0E-299 T 11-10-2018 IX88_07090 2dcffb3ee53bbe97770ebb33647ae5ae 566 SUPERFAMILY SSF51556 129 566 4.98E-201 T 11-10-2018 IPR032466 Metal-dependent hydrolase IX88_07090 2dcffb3ee53bbe97770ebb33647ae5ae 566 Hamap MF_01953 Urease subunit alpha [ureC]. 1 566 57.333 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07090 2dcffb3ee53bbe97770ebb33647ae5ae 566 ProSitePatterns PS00145 Urease active site. 316 332 - T 11-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07090 2dcffb3ee53bbe97770ebb33647ae5ae 566 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 2 566 5.4E-300 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07090 2dcffb3ee53bbe97770ebb33647ae5ae 566 Gene3D G3DSA:2.30.40.10 3 479 9.0E-299 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 IX88_07090 2dcffb3ee53bbe97770ebb33647ae5ae 566 SUPERFAMILY SSF51338 423 476 9.5E-7 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 Gene3D G3DSA:3.30.980.10 560 701 5.9E-49 T 11-10-2018 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 Pfam PF01411 tRNA synthetases class II (A) 5 551 5.0E-221 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 Gene3D G3DSA:3.30.54.20 622 681 5.9E-49 T 11-10-2018 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 SUPERFAMILY SSF55186 551 715 1.44E-47 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 8.3E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 8.3E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 304 317 8.3E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 8.3E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 280 296 8.3E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 SMART SM00863 651 700 1.2E-19 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 SUPERFAMILY SSF50447 452 550 3.18E-18 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 Pfam PF02272 DHHA1 domain 743 874 6.8E-23 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 878 194.294 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 SUPERFAMILY SSF55681 2 253 9.44E-106 T 11-10-2018 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 651 700 5.3E-17 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 Gene3D G3DSA:3.30.930.10 1 250 5.7E-120 T 11-10-2018 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 Gene3D G3DSA:3.10.310.40 768 876 3.8E-25 T 11-10-2018 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 SUPERFAMILY SSF101353 254 459 6.02E-59 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 Gene3D G3DSA:2.40.30.130 457 550 6.2E-10 T 11-10-2018 IX88_07955 9fa74598cda03b7d88c16b91161b0f21 878 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 857 0.0 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 IX88_12735 8a097719c9552bf6cd17d1c3de71ba31 344 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 329 9.5E-66 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_12735 8a097719c9552bf6cd17d1c3de71ba31 344 SUPERFAMILY SSF56176 9 195 1.64E-37 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 IX88_12735 8a097719c9552bf6cd17d1c3de71ba31 344 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 211 332 4.9E-31 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_12735 8a097719c9552bf6cd17d1c3de71ba31 344 Gene3D G3DSA:3.90.78.10 223 341 7.6E-41 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_12735 8a097719c9552bf6cd17d1c3de71ba31 344 Pfam PF01565 FAD binding domain 23 145 1.3E-22 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 IX88_12735 8a097719c9552bf6cd17d1c3de71ba31 344 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 344 74.862 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_12735 8a097719c9552bf6cd17d1c3de71ba31 344 Gene3D G3DSA:3.30.465.10 73 222 4.6E-51 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 IX88_12735 8a097719c9552bf6cd17d1c3de71ba31 344 Gene3D G3DSA:3.30.43.10 1 71 7.1E-22 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 IX88_12735 8a097719c9552bf6cd17d1c3de71ba31 344 SUPERFAMILY SSF56194 208 335 4.05E-44 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_07670 650e17d2a6edced5a3eab6f69c52d2c5 481 Pfam PF01266 FAD dependent oxidoreductase 74 428 4.2E-46 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 IX88_07670 650e17d2a6edced5a3eab6f69c52d2c5 481 SUPERFAMILY SSF51905 72 364 1.12E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07670 650e17d2a6edced5a3eab6f69c52d2c5 481 Gene3D G3DSA:3.30.9.10 168 390 2.1E-57 T 11-10-2018 IX88_07670 650e17d2a6edced5a3eab6f69c52d2c5 481 Gene3D G3DSA:3.50.50.60 74 429 2.1E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_06245 71c9408f83e922e77dfd4726348e7660 324 Pfam PF07859 alpha/beta hydrolase fold 87 291 7.7E-66 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 IX88_06245 71c9408f83e922e77dfd4726348e7660 324 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 159 171 - T 11-10-2018 IPR033140 Lipase, GDXG, putative serine active site IX88_06245 71c9408f83e922e77dfd4726348e7660 324 Gene3D G3DSA:3.40.50.1820 5 321 1.4E-84 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_06245 71c9408f83e922e77dfd4726348e7660 324 SUPERFAMILY SSF53474 27 316 1.25E-69 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_15450 d84c206474fcc34877847b6917f3d6cc 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.1E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_15450 d84c206474fcc34877847b6917f3d6cc 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.1E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_15450 d84c206474fcc34877847b6917f3d6cc 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.1E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_15450 d84c206474fcc34877847b6917f3d6cc 161 SUPERFAMILY SSF46785 1 60 2.02E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_15450 d84c206474fcc34877847b6917f3d6cc 161 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 1.5E-16 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IX88_15450 d84c206474fcc34877847b6917f3d6cc 161 Gene3D G3DSA:1.10.10.10 2 51 2.8E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_15450 d84c206474fcc34877847b6917f3d6cc 161 SUPERFAMILY SSF54909 63 146 8.98E-17 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel IX88_15450 d84c206474fcc34877847b6917f3d6cc 161 SMART SM00344 1 110 1.2E-31 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 IX88_15450 d84c206474fcc34877847b6917f3d6cc 161 Gene3D G3DSA:3.30.70.920 52 148 2.3E-23 T 11-10-2018 IX88_15450 d84c206474fcc34877847b6917f3d6cc 161 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.2E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_10575 7ea77d2e9c2c642693e325d172fa9f75 472 ProSitePatterns PS00163 Fumarate lyases signature. 323 332 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 IX88_10575 7ea77d2e9c2c642693e325d172fa9f75 472 Gene3D G3DSA:1.10.40.30 414 463 2.4E-16 T 11-10-2018 IX88_10575 7ea77d2e9c2c642693e325d172fa9f75 472 PRINTS PR00149 Fumarate lyase superfamily signature 185 203 2.2E-28 T 11-10-2018 IPR000362 Fumarate lyase family IX88_10575 7ea77d2e9c2c642693e325d172fa9f75 472 PRINTS PR00149 Fumarate lyase superfamily signature 323 339 2.2E-28 T 11-10-2018 IPR000362 Fumarate lyase family IX88_10575 7ea77d2e9c2c642693e325d172fa9f75 472 PRINTS PR00149 Fumarate lyase superfamily signature 140 158 2.2E-28 T 11-10-2018 IPR000362 Fumarate lyase family IX88_10575 7ea77d2e9c2c642693e325d172fa9f75 472 PRINTS PR00149 Fumarate lyase superfamily signature 277 304 2.2E-28 T 11-10-2018 IPR000362 Fumarate lyase family IX88_10575 7ea77d2e9c2c642693e325d172fa9f75 472 Gene3D G3DSA:1.20.200.10 145 412 1.5E-102 T 11-10-2018 IX88_10575 7ea77d2e9c2c642693e325d172fa9f75 472 SUPERFAMILY SSF48557 8 466 8.01E-132 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 IX88_10575 7ea77d2e9c2c642693e325d172fa9f75 472 Pfam PF00206 Lyase 17 347 4.3E-92 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal IX88_10575 7ea77d2e9c2c642693e325d172fa9f75 472 Gene3D G3DSA:1.10.275.10 6 144 1.5E-54 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal IX88_10575 7ea77d2e9c2c642693e325d172fa9f75 472 Pfam PF10415 Fumarase C C-terminus 414 466 6.2E-16 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IX88_12175 c7356ba57b04fe82cde5ebc3f4a0ff99 116 Gene3D G3DSA:3.40.1260.10 1 115 4.4E-14 T 11-10-2018 IPR027396 DsrEFH-like IX88_12175 c7356ba57b04fe82cde5ebc3f4a0ff99 116 SUPERFAMILY SSF75169 2 116 1.97E-6 T 11-10-2018 IPR027396 DsrEFH-like IX88_02420 bac97a74996366516fdef5b3ea55b947 945 SUPERFAMILY SSF52374 11 660 4.61E-139 T 11-10-2018 IX88_02420 bac97a74996366516fdef5b3ea55b947 945 SUPERFAMILY SSF50677 213 415 8.48E-52 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 IX88_02420 bac97a74996366516fdef5b3ea55b947 945 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 11 936 21.06 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 IX88_02420 bac97a74996366516fdef5b3ea55b947 945 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 24 852 5.4E-279 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 IX88_02420 bac97a74996366516fdef5b3ea55b947 945 Gene3D G3DSA:1.10.730.20 652 936 9.8E-91 T 11-10-2018 IX88_02420 bac97a74996366516fdef5b3ea55b947 945 Gene3D G3DSA:3.40.50.620 35 641 1.7E-233 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_02420 bac97a74996366516fdef5b3ea55b947 945 SUPERFAMILY SSF47323 664 932 3.36E-75 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_02420 bac97a74996366516fdef5b3ea55b947 945 Pfam PF06827 Zinc finger found in FPG and IleRS 905 932 7.7E-7 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 IX88_02420 bac97a74996366516fdef5b3ea55b947 945 Gene3D G3DSA:3.90.740.10 204 420 1.7E-233 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 IX88_02420 bac97a74996366516fdef5b3ea55b947 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 246 269 4.3E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 IX88_02420 bac97a74996366516fdef5b3ea55b947 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 573 582 4.3E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 IX88_02420 bac97a74996366516fdef5b3ea55b947 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 60 71 4.3E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 IX88_02420 bac97a74996366516fdef5b3ea55b947 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 539 552 4.3E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 IX88_02420 bac97a74996366516fdef5b3ea55b947 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 413 428 4.3E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 IX88_02420 bac97a74996366516fdef5b3ea55b947 945 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 67 78 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_02420 bac97a74996366516fdef5b3ea55b947 945 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 36 651 1.6E-204 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_02420 bac97a74996366516fdef5b3ea55b947 945 Pfam PF08264 Anticodon-binding domain of tRNA 697 852 1.0E-27 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 IX88_11665 cb95f80971f1e83e6363388e91f25bb4 545 Pfam PF00117 Glutamine amidotransferase class-I 302 535 1.7E-59 T 11-10-2018 IPR017926 Glutamine amidotransferase IX88_11665 cb95f80971f1e83e6363388e91f25bb4 545 SUPERFAMILY SSF52540 1 267 2.32E-114 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_11665 cb95f80971f1e83e6363388e91f25bb4 545 Hamap MF_01227 CTP synthase [pyrG]. 2 541 49.285 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 IX88_11665 cb95f80971f1e83e6363388e91f25bb4 545 Pfam PF06418 CTP synthase N-terminus 4 264 1.5E-118 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 IX88_11665 cb95f80971f1e83e6363388e91f25bb4 545 SUPERFAMILY SSF52317 290 542 1.53E-83 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_11665 cb95f80971f1e83e6363388e91f25bb4 545 Gene3D G3DSA:3.40.50.300 1 285 1.2E-122 T 11-10-2018 IX88_11665 cb95f80971f1e83e6363388e91f25bb4 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 536 2.6E-242 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 IX88_11665 cb95f80971f1e83e6363388e91f25bb4 545 Gene3D G3DSA:3.40.50.880 287 545 2.1E-101 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_06400 fc7fab4d6fb1f943d23174bd64939aab 679 Gene3D G3DSA:1.10.486.10 384 553 4.9E-120 T 11-10-2018 IX88_06400 fc7fab4d6fb1f943d23174bd64939aab 679 Gene3D G3DSA:1.10.10.160 112 188 4.1E-92 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily IX88_06400 fc7fab4d6fb1f943d23174bd64939aab 679 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 6 678 3.7E-288 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 IX88_06400 fc7fab4d6fb1f943d23174bd64939aab 679 Gene3D G3DSA:3.40.50.300 281 641 4.9E-120 T 11-10-2018 IX88_06400 fc7fab4d6fb1f943d23174bd64939aab 679 SUPERFAMILY SSF52540 5 647 3.58E-156 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_06400 fc7fab4d6fb1f943d23174bd64939aab 679 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 5 678 39.54 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 IX88_06400 fc7fab4d6fb1f943d23174bd64939aab 679 Pfam PF13361 UvrD-like helicase C-terminal domain 278 622 6.5E-71 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 IX88_06400 fc7fab4d6fb1f943d23174bd64939aab 679 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 272 2.8E-71 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 IX88_06400 fc7fab4d6fb1f943d23174bd64939aab 679 Gene3D G3DSA:3.40.50.300 8 273 4.1E-92 T 11-10-2018 IX88_02035 60d0a48c337df0c730050db62a395955 366 Gene3D G3DSA:2.40.50.100 58 204 3.9E-74 T 11-10-2018 IX88_02035 60d0a48c337df0c730050db62a395955 366 Gene3D G3DSA:2.40.30.170 46 279 3.9E-74 T 11-10-2018 IX88_02035 60d0a48c337df0c730050db62a395955 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 267 1.7E-17 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IX88_02035 60d0a48c337df0c730050db62a395955 366 SUPERFAMILY SSF111369 48 273 7.45E-21 T 11-10-2018 IX88_02035 60d0a48c337df0c730050db62a395955 366 Gene3D G3DSA:1.10.287.470 92 157 3.9E-74 T 11-10-2018 IX88_02035 60d0a48c337df0c730050db62a395955 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 351 2.2E-67 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 IX88_02035 60d0a48c337df0c730050db62a395955 366 Gene3D G3DSA:2.40.420.20 280 350 3.9E-74 T 11-10-2018 IX88_10710 66695cce7e50c531175950e964e56e28 471 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 199 392 1.7E-10 T 11-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 IX88_10710 66695cce7e50c531175950e964e56e28 471 Gene3D G3DSA:2.102.10.10 50 174 2.8E-101 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_10710 66695cce7e50c531175950e964e56e28 471 TIGRFAM TIGR03228 anthran_1_2_A: anthranilate 1,2-dioxygenase, large subunit 13 450 5.9E-289 T 11-10-2018 IPR017638 Anthranilate 1,2-dioxygenase, large subunit KEGG: 00627+1.14.12.1|MetaCyc: PWY-2421|MetaCyc: PWY-5648|MetaCyc: PWY-6079 IX88_10710 66695cce7e50c531175950e964e56e28 471 SUPERFAMILY SSF50022 19 163 8.12E-47 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_10710 66695cce7e50c531175950e964e56e28 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 65 80 1.3E-34 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_10710 66695cce7e50c531175950e964e56e28 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 35 60 1.3E-34 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_10710 66695cce7e50c531175950e964e56e28 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 107 127 1.3E-34 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_10710 66695cce7e50c531175950e964e56e28 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 192 214 1.3E-34 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_10710 66695cce7e50c531175950e964e56e28 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 86 106 1.3E-34 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_10710 66695cce7e50c531175950e964e56e28 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 149 175 1.3E-34 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_10710 66695cce7e50c531175950e964e56e28 471 SUPERFAMILY SSF55961 169 456 6.99E-55 T 11-10-2018 IX88_10710 66695cce7e50c531175950e964e56e28 471 Gene3D G3DSA:3.90.380.10 28 446 2.8E-101 T 11-10-2018 IX88_10710 66695cce7e50c531175950e964e56e28 471 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 93 116 - T 11-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 IX88_10710 66695cce7e50c531175950e964e56e28 471 Pfam PF00355 Rieske [2Fe-2S] domain 51 134 4.4E-23 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 IX88_09710 d9fe41f62ab13f451ebb79f862595c90 102 Pfam PF01022 Bacterial regulatory protein, arsR family 28 71 1.5E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 IX88_09710 d9fe41f62ab13f451ebb79f862595c90 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 5.1E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 IX88_09710 d9fe41f62ab13f451ebb79f862595c90 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 21 36 5.1E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 IX88_09710 d9fe41f62ab13f451ebb79f862595c90 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 5.1E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 IX88_09710 d9fe41f62ab13f451ebb79f862595c90 102 SUPERFAMILY SSF46785 14 101 4.54E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_09710 d9fe41f62ab13f451ebb79f862595c90 102 Gene3D G3DSA:1.10.10.10 6 102 7.4E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_09710 d9fe41f62ab13f451ebb79f862595c90 102 SMART SM00418 19 97 1.0E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 IX88_00215 b4a36308704ea6d1521074fa41345876 290 SUPERFAMILY SSF54637 5 112 1.21E-36 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_00215 b4a36308704ea6d1521074fa41345876 290 Pfam PF13622 Thioesterase-like superfamily 33 282 5.0E-53 T 11-10-2018 IX88_00215 b4a36308704ea6d1521074fa41345876 290 SUPERFAMILY SSF54637 115 283 1.58E-48 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_00215 b4a36308704ea6d1521074fa41345876 290 Gene3D G3DSA:3.10.129.90 2 287 2.2E-96 T 11-10-2018 IX88_00690 23d5a44c78e91cff0fb829c783ea8751 473 Gene3D G3DSA:1.10.1060.10 14 146 1.4E-31 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 IX88_00690 23d5a44c78e91cff0fb829c783ea8751 473 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 28 135 5.9E-36 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 IX88_00690 23d5a44c78e91cff0fb829c783ea8751 473 SUPERFAMILY SSF51971 148 402 8.24E-72 T 11-10-2018 IX88_00690 23d5a44c78e91cff0fb829c783ea8751 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 150 460 2.7E-27 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_00690 23d5a44c78e91cff0fb829c783ea8751 473 Gene3D G3DSA:3.50.50.60 256 401 1.8E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_00690 23d5a44c78e91cff0fb829c783ea8751 473 SUPERFAMILY SSF46548 10 160 1.2E-37 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 IX88_00690 23d5a44c78e91cff0fb829c783ea8751 473 Gene3D G3DSA:3.40.50.720 147 255 3.6E-19 T 11-10-2018 IX88_00690 23d5a44c78e91cff0fb829c783ea8751 473 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 9 473 5.8E-237 T 11-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 IX88_00690 23d5a44c78e91cff0fb829c783ea8751 473 PRINTS PR00419 Adrenodoxin reductase family signature 151 173 3.0E-33 T 11-10-2018 IX88_00690 23d5a44c78e91cff0fb829c783ea8751 473 PRINTS PR00419 Adrenodoxin reductase family signature 216 226 3.0E-33 T 11-10-2018 IX88_00690 23d5a44c78e91cff0fb829c783ea8751 473 PRINTS PR00419 Adrenodoxin reductase family signature 174 187 3.0E-33 T 11-10-2018 IX88_00690 23d5a44c78e91cff0fb829c783ea8751 473 PRINTS PR00419 Adrenodoxin reductase family signature 326 339 3.0E-33 T 11-10-2018 IX88_00690 23d5a44c78e91cff0fb829c783ea8751 473 PRINTS PR00419 Adrenodoxin reductase family signature 292 306 3.0E-33 T 11-10-2018 IX88_13610 8caca1451dbd571b63d7b71384fcf471 187 PIRSF PIRSF036893 5 187 4.0E-60 T 11-10-2018 IPR022271 Lipocalin, ApoD type IX88_13610 8caca1451dbd571b63d7b71384fcf471 187 SUPERFAMILY SSF50814 16 186 1.47E-44 T 11-10-2018 IPR012674 Calycin IX88_13610 8caca1451dbd571b63d7b71384fcf471 187 ProSitePatterns PS00213 Lipocalin signature. 40 51 - T 11-10-2018 IPR022272 Lipocalin family conserved site IX88_13610 8caca1451dbd571b63d7b71384fcf471 187 PRINTS PR01171 Bacterial lipocalin signature 174 184 2.3E-7 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 IX88_13610 8caca1451dbd571b63d7b71384fcf471 187 PRINTS PR01171 Bacterial lipocalin signature 147 158 2.3E-7 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 IX88_13610 8caca1451dbd571b63d7b71384fcf471 187 PRINTS PR01171 Bacterial lipocalin signature 39 53 2.3E-7 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 IX88_13610 8caca1451dbd571b63d7b71384fcf471 187 Gene3D G3DSA:2.40.128.20 16 186 4.6E-51 T 11-10-2018 IPR012674 Calycin IX88_13610 8caca1451dbd571b63d7b71384fcf471 187 Pfam PF08212 Lipocalin-like domain 39 185 4.0E-51 T 11-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain IX88_16685 b16d863a66def43cff683914b683132e 477 Gene3D G3DSA:3.50.50.60 5 340 1.2E-115 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_16685 b16d863a66def43cff683914b683132e 477 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 461 6.2E-34 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 IX88_16685 b16d863a66def43cff683914b683132e 477 SUPERFAMILY SSF55424 348 471 1.65E-37 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 IX88_16685 b16d863a66def43cff683914b683132e 477 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 470 2.6E-157 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 IX88_16685 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 2.3E-69 T 11-10-2018 IX88_16685 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 2.3E-69 T 11-10-2018 IX88_16685 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.3E-69 T 11-10-2018 IX88_16685 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 44 59 2.3E-69 T 11-10-2018 IX88_16685 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 2.3E-69 T 11-10-2018 IX88_16685 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 284 2.3E-69 T 11-10-2018 IX88_16685 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 2.3E-69 T 11-10-2018 IX88_16685 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 2.3E-69 T 11-10-2018 IX88_16685 b16d863a66def43cff683914b683132e 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 2.3E-69 T 11-10-2018 IX88_16685 b16d863a66def43cff683914b683132e 477 SUPERFAMILY SSF51905 1 343 4.1E-63 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_16685 b16d863a66def43cff683914b683132e 477 PIRSF PIRSF000350 1 469 9.0E-85 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 IX88_16685 b16d863a66def43cff683914b683132e 477 Gene3D G3DSA:3.50.50.60 162 283 1.2E-115 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_16685 b16d863a66def43cff683914b683132e 477 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 45 55 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 IX88_16685 b16d863a66def43cff683914b683132e 477 Gene3D G3DSA:3.30.390.30 352 477 1.6E-41 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 IX88_16685 b16d863a66def43cff683914b683132e 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 1.7E-34 T 11-10-2018 IX88_16685 b16d863a66def43cff683914b683132e 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 285 1.7E-34 T 11-10-2018 IX88_16685 b16d863a66def43cff683914b683132e 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.7E-34 T 11-10-2018 IX88_16685 b16d863a66def43cff683914b683132e 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.7E-34 T 11-10-2018 IX88_16685 b16d863a66def43cff683914b683132e 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 1.7E-34 T 11-10-2018 IX88_16685 b16d863a66def43cff683914b683132e 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 333 3.6E-70 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_16920 65ebd5ed5e1894cf1ce6b8fbb9bb4725 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 434 6.2E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_16920 65ebd5ed5e1894cf1ce6b8fbb9bb4725 444 Gene3D G3DSA:3.30.565.10 288 437 1.7E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_16920 65ebd5ed5e1894cf1ce6b8fbb9bb4725 444 Gene3D G3DSA:1.10.287.130 169 280 2.4E-19 T 11-10-2018 IX88_16920 65ebd5ed5e1894cf1ce6b8fbb9bb4725 444 SUPERFAMILY SSF47384 202 278 1.08E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IX88_16920 65ebd5ed5e1894cf1ce6b8fbb9bb4725 444 SUPERFAMILY SSF55874 286 435 2.1E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_16920 65ebd5ed5e1894cf1ce6b8fbb9bb4725 444 SMART SM00387 326 437 5.4E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_16920 65ebd5ed5e1894cf1ce6b8fbb9bb4725 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 5.7E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_16920 65ebd5ed5e1894cf1ce6b8fbb9bb4725 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 414 5.7E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_16920 65ebd5ed5e1894cf1ce6b8fbb9bb4725 444 Pfam PF00512 His Kinase A (phospho-acceptor) domain 219 278 2.0E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_16920 65ebd5ed5e1894cf1ce6b8fbb9bb4725 444 SMART SM00388 218 280 2.5E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_03505 8956e3a267e5f52ef636cc9d6b4084a1 448 Pfam PF02321 Outer membrane efflux protein 25 222 9.2E-22 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IX88_03505 8956e3a267e5f52ef636cc9d6b4084a1 448 Pfam PF02321 Outer membrane efflux protein 245 431 5.0E-32 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IX88_03505 8956e3a267e5f52ef636cc9d6b4084a1 448 SUPERFAMILY SSF56954 1 435 5.49E-87 T 11-10-2018 IX88_03505 8956e3a267e5f52ef636cc9d6b4084a1 448 Gene3D G3DSA:1.20.1600.10 22 447 2.8E-99 T 11-10-2018 IX88_03505 8956e3a267e5f52ef636cc9d6b4084a1 448 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 445 2.3E-79 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 IX88_14365 82d92f57ec4262ec1b8b658f4b3000ab 486 PIRSF PIRSF016599 3 486 4.5E-187 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 IX88_14365 82d92f57ec4262ec1b8b658f4b3000ab 486 SUPERFAMILY SSF55031 246 391 9.84E-5 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain IX88_14365 82d92f57ec4262ec1b8b658f4b3000ab 486 SUPERFAMILY SSF53187 14 483 9.43E-63 T 11-10-2018 IX88_14365 82d92f57ec4262ec1b8b658f4b3000ab 486 PRINTS PR00934 X-His dipeptidase (M25) signature 82 101 2.7E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 IX88_14365 82d92f57ec4262ec1b8b658f4b3000ab 486 PRINTS PR00934 X-His dipeptidase (M25) signature 103 121 2.7E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 IX88_14365 82d92f57ec4262ec1b8b658f4b3000ab 486 PRINTS PR00934 X-His dipeptidase (M25) signature 431 447 2.7E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 IX88_14365 82d92f57ec4262ec1b8b658f4b3000ab 486 PRINTS PR00934 X-His dipeptidase (M25) signature 253 272 2.7E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 IX88_14365 82d92f57ec4262ec1b8b658f4b3000ab 486 PRINTS PR00934 X-His dipeptidase (M25) signature 161 179 2.7E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 IX88_14365 82d92f57ec4262ec1b8b658f4b3000ab 486 PRINTS PR00934 X-His dipeptidase (M25) signature 366 384 2.7E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 IX88_14365 82d92f57ec4262ec1b8b658f4b3000ab 486 PRINTS PR00934 X-His dipeptidase (M25) signature 453 475 2.7E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 IX88_14365 82d92f57ec4262ec1b8b658f4b3000ab 486 PRINTS PR00934 X-His dipeptidase (M25) signature 137 154 2.7E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 IX88_14365 82d92f57ec4262ec1b8b658f4b3000ab 486 PRINTS PR00934 X-His dipeptidase (M25) signature 208 225 2.7E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 IX88_14365 82d92f57ec4262ec1b8b658f4b3000ab 486 Gene3D G3DSA:3.40.630.10 373 486 4.9E-21 T 11-10-2018 IX88_14365 82d92f57ec4262ec1b8b658f4b3000ab 486 Pfam PF07687 Peptidase dimerisation domain 212 292 1.2E-4 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain IX88_14365 82d92f57ec4262ec1b8b658f4b3000ab 486 Gene3D G3DSA:3.40.630.10 3 243 6.3E-60 T 11-10-2018 IX88_14365 82d92f57ec4262ec1b8b658f4b3000ab 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 10 485 1.3E-159 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 IX88_14365 82d92f57ec4262ec1b8b658f4b3000ab 486 Pfam PF01546 Peptidase family M20/M25/M40 74 482 1.6E-19 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 IX88_00435 315fe1b026cb1a38126eb036e29f4d16 404 SUPERFAMILY SSF53383 15 401 2.82E-126 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_00435 315fe1b026cb1a38126eb036e29f4d16 404 Gene3D G3DSA:3.40.640.10 59 304 1.2E-151 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_00435 315fe1b026cb1a38126eb036e29f4d16 404 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 402 1.5E-220 T 11-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 IX88_00435 315fe1b026cb1a38126eb036e29f4d16 404 PIRSF PIRSF000521 28 160 5.1E-4 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_00435 315fe1b026cb1a38126eb036e29f4d16 404 PIRSF PIRSF000521 161 402 1.0E-37 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_00435 315fe1b026cb1a38126eb036e29f4d16 404 Pfam PF00202 Aminotransferase class-III 25 399 6.7E-123 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_00435 315fe1b026cb1a38126eb036e29f4d16 404 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 399 2.1E-154 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 IX88_00435 315fe1b026cb1a38126eb036e29f4d16 404 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_00435 315fe1b026cb1a38126eb036e29f4d16 404 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 70.723 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 IX88_00435 315fe1b026cb1a38126eb036e29f4d16 404 Gene3D G3DSA:3.90.1150.10 25 392 1.2E-151 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_08520 7843cb4c6eaa27d2838dc2f7af787f75 572 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 6.2E-41 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IX88_08520 7843cb4c6eaa27d2838dc2f7af787f75 572 Pfam PF00364 Biotin-requiring enzyme 513 571 2.0E-11 T 11-10-2018 IPR000089 Biotin/lipoyl attachment IX88_08520 7843cb4c6eaa27d2838dc2f7af787f75 572 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 5.8E-36 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IX88_08520 7843cb4c6eaa27d2838dc2f7af787f75 572 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IX88_08520 7843cb4c6eaa27d2838dc2f7af787f75 572 SUPERFAMILY SSF56059 84 342 4.6E-58 T 11-10-2018 IX88_08520 7843cb4c6eaa27d2838dc2f7af787f75 572 SMART SM00878 336 443 3.6E-54 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IX88_08520 7843cb4c6eaa27d2838dc2f7af787f75 572 Gene3D G3DSA:3.30.470.130 1 449 2.7E-176 T 11-10-2018 IX88_08520 7843cb4c6eaa27d2838dc2f7af787f75 572 SUPERFAMILY SSF51230 502 571 1.23E-13 T 11-10-2018 IPR011053 Single hybrid motif IX88_08520 7843cb4c6eaa27d2838dc2f7af787f75 572 SUPERFAMILY SSF52440 3 114 5.54E-43 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily IX88_08520 7843cb4c6eaa27d2838dc2f7af787f75 572 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 324 9.5E-77 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IX88_08520 7843cb4c6eaa27d2838dc2f7af787f75 572 Gene3D G3DSA:2.40.50.100 503 572 3.4E-18 T 11-10-2018 IX88_08520 7843cb4c6eaa27d2838dc2f7af787f75 572 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 529 546 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IX88_08520 7843cb4c6eaa27d2838dc2f7af787f75 572 SUPERFAMILY SSF51246 331 446 1.36E-37 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 IX88_05190 0ed2fefc10a3d0fcfb8b75de94290366 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.4E-39 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_05190 0ed2fefc10a3d0fcfb8b75de94290366 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.4E-39 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_05190 0ed2fefc10a3d0fcfb8b75de94290366 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.4E-39 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_05190 0ed2fefc10a3d0fcfb8b75de94290366 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_05190 0ed2fefc10a3d0fcfb8b75de94290366 119 SUPERFAMILY SSF74731 3 117 1.7E-47 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_05190 0ed2fefc10a3d0fcfb8b75de94290366 119 Pfam PF00453 Ribosomal protein L20 3 109 2.4E-46 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_05190 0ed2fefc10a3d0fcfb8b75de94290366 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.7E-47 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_05190 0ed2fefc10a3d0fcfb8b75de94290366 119 Gene3D G3DSA:1.10.1900.20 56 118 2.2E-25 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_05190 0ed2fefc10a3d0fcfb8b75de94290366 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-22 T 11-10-2018 IX88_05190 0ed2fefc10a3d0fcfb8b75de94290366 119 Gene3D G3DSA:1.10.720.90 2 55 3.9E-24 T 11-10-2018 IX88_05190 0ed2fefc10a3d0fcfb8b75de94290366 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.472 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_08460 dfc8188e4819fa0b6156c0567660bdb7 1060 SUPERFAMILY SSF69279 24 197 3.4E-40 T 11-10-2018 IX88_08460 dfc8188e4819fa0b6156c0567660bdb7 1060 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 562 669 6.5E-37 T 11-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain IX88_08460 dfc8188e4819fa0b6156c0567660bdb7 1060 Gene3D G3DSA:3.55.50.10 111 221 1.2E-46 T 11-10-2018 IX88_08460 dfc8188e4819fa0b6156c0567660bdb7 1060 Pfam PF05954 Phage late control gene D protein (GPD) 43 385 6.9E-62 T 11-10-2018 IX88_08460 dfc8188e4819fa0b6156c0567660bdb7 1060 Gene3D G3DSA:3.30.1920.30 254 336 1.2E-46 T 11-10-2018 IX88_08460 dfc8188e4819fa0b6156c0567660bdb7 1060 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 35 589 4.7E-58 T 11-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein IX88_08460 dfc8188e4819fa0b6156c0567660bdb7 1060 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 24 586 8.9E-71 T 11-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset IX88_08460 dfc8188e4819fa0b6156c0567660bdb7 1060 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 691 839 2.1E-43 T 11-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal IX88_08460 dfc8188e4819fa0b6156c0567660bdb7 1060 Gene3D G3DSA:2.30.110.50 31 378 1.2E-46 T 11-10-2018 IX88_08460 dfc8188e4819fa0b6156c0567660bdb7 1060 SUPERFAMILY SSF69255 439 533 6.8E-25 T 11-10-2018 IX88_08460 dfc8188e4819fa0b6156c0567660bdb7 1060 Gene3D G3DSA:2.40.50.230 430 539 8.2E-32 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily IX88_06320 47973d317cbd51d274ad76bda07135ad 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 5.2E-227 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IX88_06320 47973d317cbd51d274ad76bda07135ad 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.463 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IX88_06320 47973d317cbd51d274ad76bda07135ad 396 Gene3D G3DSA:3.40.50.300 1 205 1.2E-68 T 11-10-2018 IX88_06320 47973d317cbd51d274ad76bda07135ad 396 SUPERFAMILY SSF50447 207 303 7.07E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IX88_06320 47973d317cbd51d274ad76bda07135ad 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.6E-57 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_06320 47973d317cbd51d274ad76bda07135ad 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site IX88_06320 47973d317cbd51d274ad76bda07135ad 396 Gene3D G3DSA:2.40.30.10 208 336 1.5E-53 T 11-10-2018 IX88_06320 47973d317cbd51d274ad76bda07135ad 396 Gene3D G3DSA:2.40.30.10 340 394 2.6E-28 T 11-10-2018 IX88_06320 47973d317cbd51d274ad76bda07135ad 396 SUPERFAMILY SSF50465 300 394 1.03E-36 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IX88_06320 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_06320 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_06320 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_06320 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_06320 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_06320 47973d317cbd51d274ad76bda07135ad 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 5.3E-15 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IX88_06320 47973d317cbd51d274ad76bda07135ad 396 SUPERFAMILY SSF52540 6 221 5.16E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_06320 47973d317cbd51d274ad76bda07135ad 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 3.5E-34 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal IX88_06320 47973d317cbd51d274ad76bda07135ad 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 6.2E-18 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 IX88_03625 47973d317cbd51d274ad76bda07135ad 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 5.2E-227 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IX88_03625 47973d317cbd51d274ad76bda07135ad 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.463 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IX88_03625 47973d317cbd51d274ad76bda07135ad 396 Gene3D G3DSA:3.40.50.300 1 205 1.2E-68 T 11-10-2018 IX88_03625 47973d317cbd51d274ad76bda07135ad 396 SUPERFAMILY SSF50447 207 303 7.07E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IX88_03625 47973d317cbd51d274ad76bda07135ad 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.6E-57 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_03625 47973d317cbd51d274ad76bda07135ad 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site IX88_03625 47973d317cbd51d274ad76bda07135ad 396 Gene3D G3DSA:2.40.30.10 208 336 1.5E-53 T 11-10-2018 IX88_03625 47973d317cbd51d274ad76bda07135ad 396 Gene3D G3DSA:2.40.30.10 340 394 2.6E-28 T 11-10-2018 IX88_03625 47973d317cbd51d274ad76bda07135ad 396 SUPERFAMILY SSF50465 300 394 1.03E-36 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IX88_03625 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_03625 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_03625 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_03625 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_03625 47973d317cbd51d274ad76bda07135ad 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_03625 47973d317cbd51d274ad76bda07135ad 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 5.3E-15 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IX88_03625 47973d317cbd51d274ad76bda07135ad 396 SUPERFAMILY SSF52540 6 221 5.16E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_03625 47973d317cbd51d274ad76bda07135ad 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 3.5E-34 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal IX88_03625 47973d317cbd51d274ad76bda07135ad 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 6.2E-18 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 SUPERFAMILY SSF55008 13 75 1.57E-18 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 SUPERFAMILY SSF81665 272 795 1.44E-12 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 PRINTS PR00943 Copper-transporting ATPase signature 428 442 3.6E-14 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 PRINTS PR00943 Copper-transporting ATPase signature 295 313 3.6E-14 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 PRINTS PR00943 Copper-transporting ATPase signature 683 700 3.6E-14 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 PRINTS PR00943 Copper-transporting ATPase signature 223 242 3.6E-14 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 PRINTS PR00943 Copper-transporting ATPase signature 123 143 3.6E-14 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 PRINTS PR00943 Copper-transporting ATPase signature 275 294 3.6E-14 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 SUPERFAMILY SSF55008 80 145 5.24E-22 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 Gene3D G3DSA:3.30.70.100 79 153 1.0E-23 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 Gene3D G3DSA:2.70.150.20 298 410 5.4E-39 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 Pfam PF00702 haloacid dehalogenase-like hydrolase 505 720 6.6E-45 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 509 515 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 Pfam PF00403 Heavy-metal-associated domain 14 74 6.5E-14 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 Pfam PF00403 Heavy-metal-associated domain 83 142 1.4E-17 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 SUPERFAMILY SSF56784 505 813 1.15E-62 T 11-10-2018 IPR036412 HAD-like superfamily IX88_08160 4601ef11e553e9b940e7601de1c68223 823 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 81 143 5.2E-13 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 13 75 3.5E-12 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 Gene3D G3DSA:3.30.70.100 12 78 1.2E-20 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 220 816 4.3E-181 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 Pfam PF00122 E1-E2 ATPase 306 485 6.7E-56 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 Gene3D G3DSA:3.40.1110.10 518 638 1.3E-92 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 ProSitePatterns PS01047 Heavy-metal-associated domain. 17 46 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 238 815 7.9E-190 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 277 784 1.9E-94 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 SUPERFAMILY SSF81653 307 405 1.96E-28 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 642 1.2E-29 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 521 1.2E-29 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 355 369 1.2E-29 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 706 725 1.2E-29 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 653 663 1.2E-29 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 729 741 1.2E-29 T 11-10-2018 IX88_08160 4601ef11e553e9b940e7601de1c68223 823 Gene3D G3DSA:3.40.50.1000 488 758 1.3E-92 T 11-10-2018 IPR023214 HAD superfamily IX88_00120 d02236d0fd2deac33c248ed93a52dd31 85 SUPERFAMILY SSF50249 7 83 2.23E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_00120 d02236d0fd2deac33c248ed93a52dd31 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 81 25.231 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00120 d02236d0fd2deac33c248ed93a52dd31 85 Pfam PF00366 Ribosomal protein S17 11 78 4.1E-32 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00120 d02236d0fd2deac33c248ed93a52dd31 85 Gene3D G3DSA:2.40.50.140 2 84 1.6E-35 T 11-10-2018 IX88_00120 d02236d0fd2deac33c248ed93a52dd31 85 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00120 d02236d0fd2deac33c248ed93a52dd31 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 77 3.0E-34 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00120 d02236d0fd2deac33c248ed93a52dd31 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 77 1.3E-36 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00120 d02236d0fd2deac33c248ed93a52dd31 85 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 3.1E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00120 d02236d0fd2deac33c248ed93a52dd31 85 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 3.1E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00120 d02236d0fd2deac33c248ed93a52dd31 85 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 3.1E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_15325 647b95718574800678da778caf91c565 74 SUPERFAMILY SSF143800 1 67 4.32E-26 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_15325 647b95718574800678da778caf91c565 74 Pfam PF01197 Ribosomal protein L31 1 66 4.8E-30 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_15325 647b95718574800678da778caf91c565 74 Gene3D G3DSA:2.30.170.50 1 70 3.3E-31 T 11-10-2018 IX88_15325 647b95718574800678da778caf91c565 74 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 30.366 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_15325 647b95718574800678da778caf91c565 74 PRINTS PR01249 Ribosomal protein L31 signature 32 47 4.4E-21 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_15325 647b95718574800678da778caf91c565 74 PRINTS PR01249 Ribosomal protein L31 signature 47 65 4.4E-21 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_15325 647b95718574800678da778caf91c565 74 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.4E-21 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_15325 647b95718574800678da778caf91c565 74 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_15325 647b95718574800678da778caf91c565 74 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 7.0E-33 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_15405 d0ea5837d45b010640d9b39b80323fd6 213 PIRSF PIRSF020606 1 212 2.2E-50 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 IX88_15405 d0ea5837d45b010640d9b39b80323fd6 213 Pfam PF09997 Predicted membrane protein (DUF2238) 42 191 3.5E-47 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 IX88_14375 ba1f7d2eb1c007c10a0769c56ec45358 748 ProSitePatterns PS00885 EPSP synthase signature 2. 647 665 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 IX88_14375 ba1f7d2eb1c007c10a0769c56ec45358 748 SUPERFAMILY SSF55205 309 741 3.76E-131 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 IX88_14375 ba1f7d2eb1c007c10a0769c56ec45358 748 Gene3D G3DSA:1.10.3660.10 184 288 5.2E-35 T 11-10-2018 IX88_14375 ba1f7d2eb1c007c10a0769c56ec45358 748 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 314 743 33.005 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 IX88_14375 ba1f7d2eb1c007c10a0769c56ec45358 748 ProSitePatterns PS00104 EPSP synthase signature 1. 393 407 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 IX88_14375 ba1f7d2eb1c007c10a0769c56ec45358 748 Pfam PF02153 Prephenate dehydrogenase 22 278 1.4E-70 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 IX88_14375 ba1f7d2eb1c007c10a0769c56ec45358 748 Gene3D G3DSA:3.65.10.10 318 734 4.2E-171 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 IX88_14375 ba1f7d2eb1c007c10a0769c56ec45358 748 SUPERFAMILY SSF48179 181 288 3.17E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_14375 ba1f7d2eb1c007c10a0769c56ec45358 748 SUPERFAMILY SSF51735 8 176 5.8E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_14375 ba1f7d2eb1c007c10a0769c56ec45358 748 Gene3D G3DSA:3.65.10.10 326 536 4.2E-171 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 IX88_14375 ba1f7d2eb1c007c10a0769c56ec45358 748 Gene3D G3DSA:3.40.50.720 6 183 3.1E-52 T 11-10-2018 IX88_14375 ba1f7d2eb1c007c10a0769c56ec45358 748 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 318 739 2.9E-129 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 IX88_14375 ba1f7d2eb1c007c10a0769c56ec45358 748 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 313 735 3.7E-118 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 IX88_10470 b08e068b55600dbd005357de630627b6 467 SUPERFAMILY SSF55424 344 466 3.61E-37 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 IX88_10470 b08e068b55600dbd005357de630627b6 467 PIRSF PIRSF000350 1 463 6.2E-88 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 IX88_10470 b08e068b55600dbd005357de630627b6 467 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 IX88_10470 b08e068b55600dbd005357de630627b6 467 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 327 3.0E-67 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_10470 b08e068b55600dbd005357de630627b6 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 1.3E-38 T 11-10-2018 IX88_10470 b08e068b55600dbd005357de630627b6 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.3E-38 T 11-10-2018 IX88_10470 b08e068b55600dbd005357de630627b6 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 1.3E-38 T 11-10-2018 IX88_10470 b08e068b55600dbd005357de630627b6 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 1.3E-38 T 11-10-2018 IX88_10470 b08e068b55600dbd005357de630627b6 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 1.3E-38 T 11-10-2018 IX88_10470 b08e068b55600dbd005357de630627b6 467 Gene3D G3DSA:3.30.390.30 348 467 2.1E-40 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 IX88_10470 b08e068b55600dbd005357de630627b6 467 SUPERFAMILY SSF51905 4 370 2.46E-62 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_10470 b08e068b55600dbd005357de630627b6 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 1.4E-67 T 11-10-2018 IX88_10470 b08e068b55600dbd005357de630627b6 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.4E-67 T 11-10-2018 IX88_10470 b08e068b55600dbd005357de630627b6 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 1.4E-67 T 11-10-2018 IX88_10470 b08e068b55600dbd005357de630627b6 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.4E-67 T 11-10-2018 IX88_10470 b08e068b55600dbd005357de630627b6 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 1.4E-67 T 11-10-2018 IX88_10470 b08e068b55600dbd005357de630627b6 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 1.4E-67 T 11-10-2018 IX88_10470 b08e068b55600dbd005357de630627b6 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 1.4E-67 T 11-10-2018 IX88_10470 b08e068b55600dbd005357de630627b6 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 1.4E-67 T 11-10-2018 IX88_10470 b08e068b55600dbd005357de630627b6 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 1.4E-67 T 11-10-2018 IX88_10470 b08e068b55600dbd005357de630627b6 467 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 467 2.0E-170 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 IX88_10470 b08e068b55600dbd005357de630627b6 467 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 2.0E-35 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 IX88_10470 b08e068b55600dbd005357de630627b6 467 Gene3D G3DSA:3.50.50.60 6 334 6.4E-115 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_10470 b08e068b55600dbd005357de630627b6 467 Gene3D G3DSA:3.50.50.60 156 277 6.4E-115 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_13125 2f1757a8947858fec129834da6c24be1 302 Pfam PF00849 RNA pseudouridylate synthase 100 248 2.7E-21 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_13125 2f1757a8947858fec129834da6c24be1 302 SUPERFAMILY SSF55120 85 298 1.52E-49 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_13125 2f1757a8947858fec129834da6c24be1 302 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 139 153 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_13125 2f1757a8947858fec129834da6c24be1 302 Gene3D G3DSA:3.30.2350.10 85 299 2.4E-44 T 11-10-2018 IX88_09715 1c1a8bc92d7698c6121c9cccd424adb0 188 SUPERFAMILY SSF48498 76 181 3.25E-9 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_09715 1c1a8bc92d7698c6121c9cccd424adb0 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 5.5E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_09715 1c1a8bc92d7698c6121c9cccd424adb0 188 SUPERFAMILY SSF46689 3 70 2.57E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_09715 1c1a8bc92d7698c6121c9cccd424adb0 188 Gene3D G3DSA:1.10.357.10 1 185 6.7E-38 T 11-10-2018 IX88_09715 1c1a8bc92d7698c6121c9cccd424adb0 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 5.3E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_09715 1c1a8bc92d7698c6121c9cccd424adb0 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 5.3E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_00475 ebcb88d481cce55d7fdfef1b9d20bc6e 214 PIRSF PIRSF009320 1 208 1.2E-29 T 11-10-2018 IX88_00475 ebcb88d481cce55d7fdfef1b9d20bc6e 214 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 159 2.9E-17 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain IX88_00475 ebcb88d481cce55d7fdfef1b9d20bc6e 214 SUPERFAMILY SSF52540 1 205 5.9E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_00475 ebcb88d481cce55d7fdfef1b9d20bc6e 214 Gene3D G3DSA:3.40.50.300 1 208 1.1E-42 T 11-10-2018 IX88_06100 a91870128b8236f9c3ec63d1522d7c58 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 185 9.5E-29 T 11-10-2018 IX88_06100 a91870128b8236f9c3ec63d1522d7c58 224 Gene3D G3DSA:1.10.150.240 17 84 7.3E-60 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IX88_06100 a91870128b8236f9c3ec63d1522d7c58 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 177 5.1E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IX88_06100 a91870128b8236f9c3ec63d1522d7c58 224 SUPERFAMILY SSF56784 1 216 4.71E-54 T 11-10-2018 IPR036412 HAD-like superfamily IX88_06100 a91870128b8236f9c3ec63d1522d7c58 224 Gene3D G3DSA:3.40.50.1000 6 204 7.3E-60 T 11-10-2018 IPR023214 HAD superfamily IX88_00940 752b71d1c567921290d5ea687518a1aa 127 Pfam PF12568 Acetyltransferase (GNAT) domain 3 98 3.2E-11 T 11-10-2018 IPR000182 GNAT domain IX88_00940 752b71d1c567921290d5ea687518a1aa 127 Gene3D G3DSA:3.40.630.30 1 111 9.7E-17 T 11-10-2018 IX88_00940 752b71d1c567921290d5ea687518a1aa 127 SUPERFAMILY SSF55729 1 107 2.99E-12 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_14380 f1b7b0c94df465334d87c4412d411209 369 Gene3D G3DSA:3.40.190.10 103 274 3.1E-60 T 11-10-2018 IX88_14380 f1b7b0c94df465334d87c4412d411209 369 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 252 274 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 IX88_14380 f1b7b0c94df465334d87c4412d411209 369 SUPERFAMILY SSF53850 101 285 1.9E-61 T 11-10-2018 IX88_14380 f1b7b0c94df465334d87c4412d411209 369 Gene3D G3DSA:3.30.70.260 279 368 3.7E-28 T 11-10-2018 IX88_14380 f1b7b0c94df465334d87c4412d411209 369 TIGRFAM TIGR01807 CM_P2: chorismate mutase 14 89 1.9E-26 T 11-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 IX88_14380 f1b7b0c94df465334d87c4412d411209 369 Pfam PF01842 ACT domain 287 351 1.9E-12 T 11-10-2018 IPR002912 ACT domain IX88_14380 f1b7b0c94df465334d87c4412d411209 369 SUPERFAMILY SSF48600 10 97 4.43E-20 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 IX88_14380 f1b7b0c94df465334d87c4412d411209 369 PIRSF PIRSF001500 7 369 1.1E-135 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 IX88_14380 f1b7b0c94df465334d87c4412d411209 369 SUPERFAMILY SSF55021 271 366 1.55E-26 T 11-10-2018 IX88_14380 f1b7b0c94df465334d87c4412d411209 369 Gene3D G3DSA:1.20.59.10 14 100 1.9E-30 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 IX88_14380 f1b7b0c94df465334d87c4412d411209 369 Gene3D G3DSA:3.40.190.10 181 265 3.1E-60 T 11-10-2018 IX88_14380 f1b7b0c94df465334d87c4412d411209 369 SMART SM00830 18 99 2.7E-29 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 IX88_14380 f1b7b0c94df465334d87c4412d411209 369 Pfam PF00800 Prephenate dehydratase 101 278 5.8E-63 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 IX88_14380 f1b7b0c94df465334d87c4412d411209 369 Pfam PF01817 Chorismate mutase type II 18 96 4.7E-22 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 IX88_08745 9631db8dbe1253e74cff84ac8f34edc5 437 Gene3D G3DSA:1.20.1250.20 30 429 2.0E-67 T 11-10-2018 IX88_08745 9631db8dbe1253e74cff84ac8f34edc5 437 Pfam PF07690 Major Facilitator Superfamily 41 300 3.5E-38 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_08745 9631db8dbe1253e74cff84ac8f34edc5 437 ProSitePatterns PS00216 Sugar transport proteins signature 1. 306 323 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_08745 9631db8dbe1253e74cff84ac8f34edc5 437 ProSitePatterns PS00217 Sugar transport proteins signature 2. 348 373 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_08745 9631db8dbe1253e74cff84ac8f34edc5 437 SUPERFAMILY SSF103473 16 428 2.75E-80 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_10135 3d9f4f61b9832b8d9a1c870325b1995a 154 Gene3D G3DSA:3.90.960.10 1 154 2.2E-59 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 IX88_10135 3d9f4f61b9832b8d9a1c870325b1995a 154 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 152 2.5E-58 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC IX88_10135 3d9f4f61b9832b8d9a1c870325b1995a 154 SUPERFAMILY SSF55826 2 152 1.57E-45 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 IX88_10135 3d9f4f61b9832b8d9a1c870325b1995a 154 Pfam PF04073 Aminoacyl-tRNA editing domain 32 143 3.6E-27 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 IX88_10135 3d9f4f61b9832b8d9a1c870325b1995a 154 PIRSF PIRSF006181 1 154 7.3E-58 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC IX88_12275 b229082c2368b007e04cff0d80333696 151 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 142 2.0E-66 T 11-10-2018 IX88_12275 b229082c2368b007e04cff0d80333696 151 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 5 144 1.8E-62 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 IX88_12275 b229082c2368b007e04cff0d80333696 151 ProSitePatterns PS01029 Dehydroquinase class II signature. 8 25 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 IX88_12275 b229082c2368b007e04cff0d80333696 151 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 151 72.729 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 IX88_12275 b229082c2368b007e04cff0d80333696 151 Pfam PF01220 Dehydroquinase class II 5 141 5.8E-62 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 IX88_12275 b229082c2368b007e04cff0d80333696 151 SUPERFAMILY SSF52304 4 146 3.27E-62 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 IX88_12275 b229082c2368b007e04cff0d80333696 151 PIRSF PIRSF001399 1 148 2.1E-62 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 IX88_12275 b229082c2368b007e04cff0d80333696 151 Gene3D G3DSA:3.40.50.9100 1 151 1.5E-68 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 IX88_15095 c9595cd572574f82b4b9fcbd4f0fbfb5 351 Gene3D G3DSA:3.40.1030.10 73 350 2.1E-102 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 IX88_15095 c9595cd572574f82b4b9fcbd4f0fbfb5 351 SUPERFAMILY SSF52418 77 344 2.35E-87 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 IX88_15095 c9595cd572574f82b4b9fcbd4f0fbfb5 351 Pfam PF02885 Glycosyl transferase family, helical bundle domain 9 68 8.3E-17 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 IX88_15095 c9595cd572574f82b4b9fcbd4f0fbfb5 351 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 340 4.5E-118 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 IX88_15095 c9595cd572574f82b4b9fcbd4f0fbfb5 351 Pfam PF00591 Glycosyl transferase family, a/b domain 77 332 2.8E-100 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 IX88_15095 c9595cd572574f82b4b9fcbd4f0fbfb5 351 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 341 37.683 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 IX88_15095 c9595cd572574f82b4b9fcbd4f0fbfb5 351 Gene3D G3DSA:1.20.970.10 1 72 2.9E-31 T 11-10-2018 IX88_15095 c9595cd572574f82b4b9fcbd4f0fbfb5 351 SUPERFAMILY SSF47648 3 72 2.75E-19 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 IX88_03690 540a63ca15cdbb7cb3915b90fb4e58b2 144 Pfam PF01609 Transposase DDE domain 31 74 4.9E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IX88_03690 540a63ca15cdbb7cb3915b90fb4e58b2 144 SUPERFAMILY SSF53098 29 110 5.84E-12 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_09465 540a63ca15cdbb7cb3915b90fb4e58b2 144 Pfam PF01609 Transposase DDE domain 31 74 4.9E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IX88_09465 540a63ca15cdbb7cb3915b90fb4e58b2 144 SUPERFAMILY SSF53098 29 110 5.84E-12 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_03760 540a63ca15cdbb7cb3915b90fb4e58b2 144 Pfam PF01609 Transposase DDE domain 31 74 4.9E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IX88_03760 540a63ca15cdbb7cb3915b90fb4e58b2 144 SUPERFAMILY SSF53098 29 110 5.84E-12 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_05405 540a63ca15cdbb7cb3915b90fb4e58b2 144 Pfam PF01609 Transposase DDE domain 31 74 4.9E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IX88_05405 540a63ca15cdbb7cb3915b90fb4e58b2 144 SUPERFAMILY SSF53098 29 110 5.84E-12 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_12550 540a63ca15cdbb7cb3915b90fb4e58b2 144 Pfam PF01609 Transposase DDE domain 31 74 4.9E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IX88_12550 540a63ca15cdbb7cb3915b90fb4e58b2 144 SUPERFAMILY SSF53098 29 110 5.84E-12 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_12335 540a63ca15cdbb7cb3915b90fb4e58b2 144 Pfam PF01609 Transposase DDE domain 31 74 4.9E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IX88_12335 540a63ca15cdbb7cb3915b90fb4e58b2 144 SUPERFAMILY SSF53098 29 110 5.84E-12 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_01140 540a63ca15cdbb7cb3915b90fb4e58b2 144 Pfam PF01609 Transposase DDE domain 31 74 4.9E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IX88_01140 540a63ca15cdbb7cb3915b90fb4e58b2 144 SUPERFAMILY SSF53098 29 110 5.84E-12 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_02830 1fe4f144cf3a4ac97f1e81fbdbd714d2 375 Gene3D G3DSA:2.40.110.10 119 231 1.9E-41 T 11-10-2018 IX88_02830 1fe4f144cf3a4ac97f1e81fbdbd714d2 375 PIRSF PIRSF016578 1 217 1.9E-12 T 11-10-2018 IX88_02830 1fe4f144cf3a4ac97f1e81fbdbd714d2 375 PIRSF PIRSF016578 234 371 2.3E-13 T 11-10-2018 IX88_02830 1fe4f144cf3a4ac97f1e81fbdbd714d2 375 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 IX88_02830 1fe4f144cf3a4ac97f1e81fbdbd714d2 375 SUPERFAMILY SSF47203 225 375 2.74E-59 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_02830 1fe4f144cf3a4ac97f1e81fbdbd714d2 375 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 1.1E-51 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_02830 1fe4f144cf3a4ac97f1e81fbdbd714d2 375 Gene3D G3DSA:1.20.140.10 232 375 8.9E-58 T 11-10-2018 IX88_02830 1fe4f144cf3a4ac97f1e81fbdbd714d2 375 SUPERFAMILY SSF56645 2 240 1.57E-83 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_02830 1fe4f144cf3a4ac97f1e81fbdbd714d2 375 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 116 2.0E-36 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_02830 1fe4f144cf3a4ac97f1e81fbdbd714d2 375 Gene3D G3DSA:1.10.540.10 1 118 3.2E-44 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_02830 1fe4f144cf3a4ac97f1e81fbdbd714d2 375 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 4.4E-25 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_15850 19a4ea93550b225151a7e3c5a159a45b 270 Gene3D G3DSA:3.30.470.10 3 107 1.4E-23 T 11-10-2018 IX88_15850 19a4ea93550b225151a7e3c5a159a45b 270 Pfam PF01063 Amino-transferase class IV 25 247 4.6E-44 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 IX88_15850 19a4ea93550b225151a7e3c5a159a45b 270 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 6 261 4.7E-67 T 11-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 IX88_15850 19a4ea93550b225151a7e3c5a159a45b 270 SUPERFAMILY SSF56752 2 260 3.14E-53 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 IX88_15850 19a4ea93550b225151a7e3c5a159a45b 270 Gene3D G3DSA:3.20.10.10 125 264 2.0E-37 T 11-10-2018 IX88_14630 d9c40f99186a248331066a1f5935d8fd 404 Gene3D G3DSA:1.20.1250.20 9 400 7.7E-49 T 11-10-2018 IX88_14630 d9c40f99186a248331066a1f5935d8fd 404 Pfam PF07690 Major Facilitator Superfamily 22 337 2.1E-33 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_14630 d9c40f99186a248331066a1f5935d8fd 404 SUPERFAMILY SSF103473 8 396 5.62E-59 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_17030 bdde6515ec96c9a8feade6c714651bba 232 Gene3D G3DSA:3.40.50.360 1 231 1.2E-76 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_17030 bdde6515ec96c9a8feade6c714651bba 232 Pfam PF02525 Flavodoxin-like fold 1 205 2.5E-51 T 11-10-2018 IPR003680 Flavodoxin-like fold IX88_17030 bdde6515ec96c9a8feade6c714651bba 232 SUPERFAMILY SSF52218 1 230 1.38E-65 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_05240 058f1bb3122001572c27efe1fbdd656b 506 SUPERFAMILY SSF109604 313 502 2.29E-46 T 11-10-2018 IX88_05240 058f1bb3122001572c27efe1fbdd656b 506 Gene3D G3DSA:1.10.3210.10 310 505 3.6E-58 T 11-10-2018 IX88_05240 058f1bb3122001572c27efe1fbdd656b 506 PIRSF PIRSF001267 1 502 3.3E-197 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 IX88_05240 058f1bb3122001572c27efe1fbdd656b 506 Gene3D G3DSA:3.30.420.40 12 303 1.0E-88 T 11-10-2018 IX88_05240 058f1bb3122001572c27efe1fbdd656b 506 Pfam PF01966 HD domain 335 415 1.0E-4 T 11-10-2018 IPR006674 HD domain IX88_05240 058f1bb3122001572c27efe1fbdd656b 506 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 11 306 2.3E-96 T 11-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 IX88_05240 058f1bb3122001572c27efe1fbdd656b 506 Pfam PF02541 Ppx/GppA phosphatase family 25 308 1.1E-81 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 IX88_05240 058f1bb3122001572c27efe1fbdd656b 506 Gene3D G3DSA:3.30.420.150 115 295 1.0E-88 T 11-10-2018 IX88_05240 058f1bb3122001572c27efe1fbdd656b 506 SUPERFAMILY SSF53067 135 310 5.49E-47 T 11-10-2018 IX88_05240 058f1bb3122001572c27efe1fbdd656b 506 SUPERFAMILY SSF53067 11 131 1.05E-34 T 11-10-2018 IX88_14480 323016be746d6facc57a2065478b505f 456 Pfam PF01136 Peptidase family U32 75 340 3.3E-96 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 IX88_14480 323016be746d6facc57a2065478b505f 456 Pfam PF16325 Peptidase family U32 C-terminal domain 358 437 6.6E-20 T 11-10-2018 IPR032525 Peptidase family U32, C-terminal IX88_14480 323016be746d6facc57a2065478b505f 456 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 IX88_14480 323016be746d6facc57a2065478b505f 456 Gene3D G3DSA:2.40.30.10 354 438 6.6E-10 T 11-10-2018 IX88_06720 fac6140d55ee70a6a417617655ad7787 193 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 4 185 7.5E-26 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 IX88_06720 fac6140d55ee70a6a417617655ad7787 193 Pfam PF04973 Nicotinamide mononucleotide transporter 3 181 1.1E-44 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 IX88_01190 7eaf749a125e181deb04b49bd642ec5c 499 SUPERFAMILY SSF53383 128 492 1.55E-86 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_01190 7eaf749a125e181deb04b49bd642ec5c 499 Pfam PF00155 Aminotransferase class I and II 163 458 9.8E-26 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 IX88_01190 7eaf749a125e181deb04b49bd642ec5c 499 Gene3D G3DSA:3.40.640.10 119 483 1.4E-112 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_01190 7eaf749a125e181deb04b49bd642ec5c 499 Gene3D G3DSA:1.10.10.10 10 90 2.7E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_01190 7eaf749a125e181deb04b49bd642ec5c 499 SMART SM00345 25 84 7.9E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_01190 7eaf749a125e181deb04b49bd642ec5c 499 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 84 1.5E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_01190 7eaf749a125e181deb04b49bd642ec5c 499 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 5.4E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_01190 7eaf749a125e181deb04b49bd642ec5c 499 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 5.4E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_01190 7eaf749a125e181deb04b49bd642ec5c 499 SUPERFAMILY SSF46785 17 86 2.27E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_12965 d89767086e8aaafecf9fd131ed53e43e 227 Gene3D G3DSA:3.40.50.720 3 207 5.3E-11 T 11-10-2018 IX88_12965 d89767086e8aaafecf9fd131ed53e43e 227 Pfam PF00106 short chain dehydrogenase 58 190 7.3E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_12965 d89767086e8aaafecf9fd131ed53e43e 227 SUPERFAMILY SSF51735 63 191 6.43E-11 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_11140 10c06f6a18f6e567dafe75272e49eda8 290 SUPERFAMILY SSF51735 2 161 6.94E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_11140 10c06f6a18f6e567dafe75272e49eda8 290 Gene3D G3DSA:1.10.1040.10 162 289 4.3E-36 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 IX88_11140 10c06f6a18f6e567dafe75272e49eda8 290 PIRSF PIRSF000103 1 290 2.9E-72 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 IX88_11140 10c06f6a18f6e567dafe75272e49eda8 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 159 1.9E-46 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 IX88_11140 10c06f6a18f6e567dafe75272e49eda8 290 Gene3D G3DSA:3.40.50.720 1 161 7.3E-48 T 11-10-2018 IX88_11140 10c06f6a18f6e567dafe75272e49eda8 290 SUPERFAMILY SSF48179 162 288 4.65E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_11140 10c06f6a18f6e567dafe75272e49eda8 290 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 282 6.2E-29 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 IX88_16935 675ac18fd944bf8280c139a64da81ab4 434 Pfam PF02530 Porin subfamily 125 341 2.6E-5 T 11-10-2018 IPR003684 Porin, alpha proteobacteria type GO:0015288|GO:0016020|GO:0055085 IX88_16935 675ac18fd944bf8280c139a64da81ab4 434 SUPERFAMILY SSF56935 94 434 4.58E-26 T 11-10-2018 IX88_03855 3951a02e7b03de552ff96a2631092760 195 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 8 193 6.8E-53 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 IX88_03855 3951a02e7b03de552ff96a2631092760 195 PIRSF PIRSF000847 4 195 1.3E-46 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 IX88_03855 3951a02e7b03de552ff96a2631092760 195 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 63 85 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 IX88_03855 3951a02e7b03de552ff96a2631092760 195 Pfam PF01066 CDP-alcohol phosphatidyltransferase 8 85 1.6E-17 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 IX88_03855 3951a02e7b03de552ff96a2631092760 195 Gene3D G3DSA:1.20.120.1760 5 188 2.1E-13 T 11-10-2018 IX88_15345 f50696b3e1b903734adc3ce67f2a7c22 872 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 689 795 1.1E-10 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 IX88_15345 f50696b3e1b903734adc3ce67f2a7c22 872 SUPERFAMILY SSF54211 603 795 2.2E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_15345 f50696b3e1b903734adc3ce67f2a7c22 872 SUPERFAMILY SSF52540 68 590 9.97E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_15345 f50696b3e1b903734adc3ce67f2a7c22 872 Gene3D G3DSA:3.30.230.10 582 822 3.6E-90 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IX88_15345 f50696b3e1b903734adc3ce67f2a7c22 872 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 100 119 1.1E-10 T 11-10-2018 IX88_15345 f50696b3e1b903734adc3ce67f2a7c22 872 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 716 735 1.1E-10 T 11-10-2018 IX88_15345 f50696b3e1b903734adc3ce67f2a7c22 872 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 686 705 1.1E-10 T 11-10-2018 IX88_15345 f50696b3e1b903734adc3ce67f2a7c22 872 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 746 764 1.1E-10 T 11-10-2018 IX88_15345 f50696b3e1b903734adc3ce67f2a7c22 872 Gene3D G3DSA:1.10.8.60 489 576 7.7E-14 T 11-10-2018 IX88_15345 f50696b3e1b903734adc3ce67f2a7c22 872 Pfam PF13654 AAA domain 64 579 2.6E-171 T 11-10-2018 IX88_15345 f50696b3e1b903734adc3ce67f2a7c22 872 Gene3D G3DSA:3.40.50.300 281 488 4.0E-55 T 11-10-2018 IX88_15345 f50696b3e1b903734adc3ce67f2a7c22 872 Gene3D G3DSA:3.40.50.300 45 231 5.3E-29 T 11-10-2018 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 173 321 2.0E-27 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 20 325 40.39 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 21 323 1.5E-91 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 SUPERFAMILY SSF53671 20 324 1.06E-92 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 21 164 2.9E-41 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 152 163 4.5E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 66 85 4.5E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 288 311 4.5E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 276 285 4.5E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 66 73 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 304 318 1.1E-29 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 239 248 1.1E-29 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 56 78 1.1E-29 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 151 168 1.1E-29 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 1.1E-29 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 280 285 1.1E-29 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 Gene3D G3DSA:3.40.50.1370 21 321 8.1E-90 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 IX88_08035 954ea543ba8c6c6165725372fb4c5782 338 Gene3D G3DSA:3.40.50.1370 152 310 8.1E-90 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 IX88_04220 3dbe4ae85faf12f0b58023ee8fedef3d 401 SUPERFAMILY SSF160996 204 341 1.7E-16 T 11-10-2018 IX88_04220 3dbe4ae85faf12f0b58023ee8fedef3d 401 Gene3D G3DSA:1.10.8.260 271 324 3.4E-63 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily IX88_04220 3dbe4ae85faf12f0b58023ee8fedef3d 401 Gene3D G3DSA:2.40.30.10 192 341 3.4E-63 T 11-10-2018 IX88_04220 3dbe4ae85faf12f0b58023ee8fedef3d 401 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 392 2.1E-78 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like IX88_04220 3dbe4ae85faf12f0b58023ee8fedef3d 401 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 26 400 1.2E-186 T 11-10-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 IX88_04220 3dbe4ae85faf12f0b58023ee8fedef3d 401 PRINTS PR00419 Adrenodoxin reductase family signature 5 27 2.3E-6 T 11-10-2018 IX88_04220 3dbe4ae85faf12f0b58023ee8fedef3d 401 PRINTS PR00419 Adrenodoxin reductase family signature 28 41 2.3E-6 T 11-10-2018 IX88_04220 3dbe4ae85faf12f0b58023ee8fedef3d 401 SUPERFAMILY SSF51905 1 396 1.12E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_04220 3dbe4ae85faf12f0b58023ee8fedef3d 401 Pfam PF03486 HI0933-like protein 5 393 1.9E-83 T 11-10-2018 IX88_04220 3dbe4ae85faf12f0b58023ee8fedef3d 401 Gene3D G3DSA:3.50.50.60 6 392 3.4E-63 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07265 684070cda6a7544eeb97bc3fb62eefb7 200 Pfam PF01810 LysE type translocator 17 200 1.8E-37 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_15805 6818fb25c76da6e571749a63aac34544 124 Pfam PF16137 Domain of unknown function (DUF4845) 30 112 2.2E-15 T 11-10-2018 IPR032314 Protein of unknown function DUF4845 IX88_09240 09c4e3306cc9a341eb485c4ead37272b 186 Pfam PF02417 Chromate transporter 18 174 1.5E-30 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 IX88_03915 357e82aea53b5c6c05abce334179bd2a 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 246 1.7E-64 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 IX88_03915 357e82aea53b5c6c05abce334179bd2a 249 SUPERFAMILY SSF55315 3 78 5.89E-17 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like IX88_03915 357e82aea53b5c6c05abce334179bd2a 249 SMART SM00967 6 82 4.1E-16 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 IX88_03915 357e82aea53b5c6c05abce334179bd2a 249 Gene3D G3DSA:3.30.1330.30 1 78 7.0E-24 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like IX88_03915 357e82aea53b5c6c05abce334179bd2a 249 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 247 38.089 T 11-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB IX88_03915 357e82aea53b5c6c05abce334179bd2a 249 SUPERFAMILY SSF75217 70 246 5.43E-45 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases IX88_03915 357e82aea53b5c6c05abce334179bd2a 249 Pfam PF00588 SpoU rRNA Methylase family 98 240 2.1E-37 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 IX88_03915 357e82aea53b5c6c05abce334179bd2a 249 Gene3D G3DSA:3.40.1280.10 81 247 4.3E-52 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IX88_03915 357e82aea53b5c6c05abce334179bd2a 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 80 1.5E-17 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 IX88_00210 4f5b76224520d3edda8ed4e78c2101fe 421 PRINTS PR00173 Glutamate-aspartate symporter signature 238 257 6.1E-54 T 11-10-2018 IX88_00210 4f5b76224520d3edda8ed4e78c2101fe 421 PRINTS PR00173 Glutamate-aspartate symporter signature 367 387 6.1E-54 T 11-10-2018 IX88_00210 4f5b76224520d3edda8ed4e78c2101fe 421 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 6.1E-54 T 11-10-2018 IX88_00210 4f5b76224520d3edda8ed4e78c2101fe 421 PRINTS PR00173 Glutamate-aspartate symporter signature 340 359 6.1E-54 T 11-10-2018 IX88_00210 4f5b76224520d3edda8ed4e78c2101fe 421 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 6.1E-54 T 11-10-2018 IX88_00210 4f5b76224520d3edda8ed4e78c2101fe 421 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 6.1E-54 T 11-10-2018 IX88_00210 4f5b76224520d3edda8ed4e78c2101fe 421 PRINTS PR00173 Glutamate-aspartate symporter signature 156 178 6.1E-54 T 11-10-2018 IX88_00210 4f5b76224520d3edda8ed4e78c2101fe 421 PRINTS PR00173 Glutamate-aspartate symporter signature 305 331 6.1E-54 T 11-10-2018 IX88_00210 4f5b76224520d3edda8ed4e78c2101fe 421 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 6.1E-54 T 11-10-2018 IX88_00210 4f5b76224520d3edda8ed4e78c2101fe 421 Gene3D G3DSA:1.10.3860.10 3 420 5.3E-125 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IX88_00210 4f5b76224520d3edda8ed4e78c2101fe 421 Pfam PF00375 Sodium:dicarboxylate symporter family 12 412 2.1E-118 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 IX88_00210 4f5b76224520d3edda8ed4e78c2101fe 421 SUPERFAMILY SSF118215 12 413 2.62E-107 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IX88_09040 340b2f7e5f214781c2f1eabfa6814853 496 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 86 2.9E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_09040 340b2f7e5f214781c2f1eabfa6814853 496 SUPERFAMILY SSF46785 21 88 1.36E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_09040 340b2f7e5f214781c2f1eabfa6814853 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 1.2E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_09040 340b2f7e5f214781c2f1eabfa6814853 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 1.2E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_09040 340b2f7e5f214781c2f1eabfa6814853 496 SUPERFAMILY SSF53383 116 492 3.14E-82 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_09040 340b2f7e5f214781c2f1eabfa6814853 496 Gene3D G3DSA:1.10.10.10 13 93 2.5E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_09040 340b2f7e5f214781c2f1eabfa6814853 496 SMART SM00345 27 86 7.1E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_09040 340b2f7e5f214781c2f1eabfa6814853 496 Pfam PF00155 Aminotransferase class I and II 164 353 1.1E-14 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 IX88_09040 340b2f7e5f214781c2f1eabfa6814853 496 Gene3D G3DSA:3.40.640.10 122 484 1.7E-107 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_11755 9e17cd3b26386029ae0d456832655407 513 SUPERFAMILY SSF55021 418 512 2.2E-24 T 11-10-2018 IX88_11755 9e17cd3b26386029ae0d456832655407 513 Gene3D G3DSA:3.40.50.1100 14 325 5.4E-130 T 11-10-2018 IX88_11755 9e17cd3b26386029ae0d456832655407 513 Gene3D G3DSA:3.40.50.1100 50 146 5.4E-130 T 11-10-2018 IX88_11755 9e17cd3b26386029ae0d456832655407 513 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 314 1.0E-76 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme IX88_11755 9e17cd3b26386029ae0d456832655407 513 SUPERFAMILY SSF53686 8 363 1.31E-95 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IX88_11755 9e17cd3b26386029ae0d456832655407 513 Gene3D G3DSA:3.40.1020.10 336 513 1.5E-64 T 11-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 IX88_11755 9e17cd3b26386029ae0d456832655407 513 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 5 512 6.3E-216 T 11-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 IX88_11755 9e17cd3b26386029ae0d456832655407 513 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 327 417 6.7E-24 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 IX88_11755 9e17cd3b26386029ae0d456832655407 513 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 423 512 4.2E-23 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 IX88_11755 9e17cd3b26386029ae0d456832655407 513 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 IX88_06985 115688baec0efa8f9665ae1335ae7409 393 Gene3D G3DSA:3.50.50.60 5 285 6.4E-79 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_06985 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 6.3E-23 T 11-10-2018 IX88_06985 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 6.3E-23 T 11-10-2018 IX88_06985 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 6.3E-23 T 11-10-2018 IX88_06985 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 6.3E-23 T 11-10-2018 IX88_06985 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 6.3E-23 T 11-10-2018 IX88_06985 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 175 5.9E-15 T 11-10-2018 IX88_06985 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 5.9E-15 T 11-10-2018 IX88_06985 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 5.9E-15 T 11-10-2018 IX88_06985 115688baec0efa8f9665ae1335ae7409 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 5.9E-15 T 11-10-2018 IX88_06985 115688baec0efa8f9665ae1335ae7409 393 SUPERFAMILY SSF51905 2 310 2.59E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_06985 115688baec0efa8f9665ae1335ae7409 393 Gene3D G3DSA:3.50.50.60 111 249 6.4E-79 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_06985 115688baec0efa8f9665ae1335ae7409 393 Gene3D G3DSA:3.30.390.120 321 384 3.0E-13 T 11-10-2018 IX88_06985 115688baec0efa8f9665ae1335ae7409 393 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 287 4.1E-51 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_01235 a7d59bc30c2921c827f9e30a55548ece 113 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 15 108 8.0E-35 T 11-10-2018 IPR009707 Membrane protein GlpM/YdgC IX88_01235 a7d59bc30c2921c827f9e30a55548ece 113 Pfam PF06942 GlpM protein 6 111 2.5E-45 T 11-10-2018 IPR009707 Membrane protein GlpM/YdgC IX88_03040 cbade2bd39b97b5bebe8a9af2932ef28 291 ProSitePatterns PS00449 ATP synthase a subunit signature. 227 236 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03040 cbade2bd39b97b5bebe8a9af2932ef28 291 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 291 15.857 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03040 cbade2bd39b97b5bebe8a9af2932ef28 291 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 45 286 1.4E-41 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03040 cbade2bd39b97b5bebe8a9af2932ef28 291 SUPERFAMILY SSF81336 103 285 1.57E-41 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03040 cbade2bd39b97b5bebe8a9af2932ef28 291 Gene3D G3DSA:1.20.120.220 102 291 4.9E-59 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03040 cbade2bd39b97b5bebe8a9af2932ef28 291 Pfam PF00119 ATP synthase A chain 55 285 5.1E-56 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_01760 cddf5644c2b9760b29f96605f6014ae0 149 SUPERFAMILY SSF48013 10 141 3.01E-37 T 11-10-2018 IPR035926 NusB-like superfamily IX88_01760 cddf5644c2b9760b29f96605f6014ae0 149 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 12 138 4.9E-39 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 IX88_01760 cddf5644c2b9760b29f96605f6014ae0 149 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 10 141 20.952 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 IX88_01760 cddf5644c2b9760b29f96605f6014ae0 149 Gene3D G3DSA:1.10.940.10 6 145 8.9E-45 T 11-10-2018 IPR035926 NusB-like superfamily IX88_01760 cddf5644c2b9760b29f96605f6014ae0 149 Pfam PF01029 NusB family 13 136 5.2E-29 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 Pfam PF13184 NusA-like KH domain 235 301 1.2E-27 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 SUPERFAMILY SSF69705 1 130 1.57E-32 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 Pfam PF08529 NusA N-terminal domain 4 128 2.3E-34 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 SUPERFAMILY SSF47794 427 493 3.45E-15 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 Gene3D G3DSA:1.10.150.20 434 492 5.6E-22 T 11-10-2018 IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 SUPERFAMILY SSF50249 137 204 1.31E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 SUPERFAMILY SSF54814 206 283 1.24E-28 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 Gene3D G3DSA:3.30.1480.10 1 133 6.8E-35 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 7.1E-109 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 Gene3D G3DSA:3.30.300.20 204 282 3.0E-31 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 Pfam PF14520 Helix-hairpin-helix domain 435 490 1.7E-9 T 11-10-2018 IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 SUPERFAMILY SSF47794 360 421 2.04E-9 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 SUPERFAMILY SSF54814 284 345 3.07E-10 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 Gene3D G3DSA:2.40.50.140 140 203 1.9E-15 T 11-10-2018 IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 Gene3D G3DSA:3.30.300.20 283 352 6.8E-20 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 SMART SM00316 138 203 9.9E-8 T 11-10-2018 IPR022967 RNA-binding domain, S1 IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 415 27.845 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 IX88_03980 31bf7c2cb6ad9a4c038471b56d45714d 494 Gene3D G3DSA:1.10.150.20 358 427 1.1E-15 T 11-10-2018 IX88_05945 6cd852cd7e6bb7c7d80c589f105fd60a 314 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 IX88_05945 6cd852cd7e6bb7c7d80c589f105fd60a 314 Gene3D G3DSA:3.20.20.70 1 241 2.3E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_05945 6cd852cd7e6bb7c7d80c589f105fd60a 314 PIRSF PIRSF006621 1 314 2.5E-77 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 IX88_05945 6cd852cd7e6bb7c7d80c589f105fd60a 314 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 309 49.438 T 11-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 IX88_05945 6cd852cd7e6bb7c7d80c589f105fd60a 314 Gene3D G3DSA:1.20.225.30 245 313 1.9E-10 T 11-10-2018 IX88_05945 6cd852cd7e6bb7c7d80c589f105fd60a 314 SUPERFAMILY SSF51395 2 309 2.01E-69 T 11-10-2018 IX88_05945 6cd852cd7e6bb7c7d80c589f105fd60a 314 Pfam PF01207 Dihydrouridine synthase (Dus) 4 309 1.7E-73 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 IX88_13185 f3cc4b08b42d77dcf1e9c3a4589172ea 879 SUPERFAMILY SSF52016 162 374 4.32E-65 T 11-10-2018 IX88_13185 f3cc4b08b42d77dcf1e9c3a4589172ea 879 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.7E-66 T 11-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 IX88_13185 f3cc4b08b42d77dcf1e9c3a4589172ea 879 Pfam PF00330 Aconitase family (aconitate hydratase) 477 827 6.5E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_13185 f3cc4b08b42d77dcf1e9c3a4589172ea 879 ProSitePatterns PS01244 Aconitase family signature 2. 770 783 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 IX88_13185 f3cc4b08b42d77dcf1e9c3a4589172ea 879 Gene3D G3DSA:1.25.40.310 1 160 2.4E-67 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 IX88_13185 f3cc4b08b42d77dcf1e9c3a4589172ea 879 PIRSF PIRSF036687 1 868 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 IX88_13185 f3cc4b08b42d77dcf1e9c3a4589172ea 879 Gene3D G3DSA:3.30.499.10 407 534 1.5E-145 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 IX88_13185 f3cc4b08b42d77dcf1e9c3a4589172ea 879 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 862 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 IX88_13185 f3cc4b08b42d77dcf1e9c3a4589172ea 879 Gene3D G3DSA:3.20.19.10 162 363 1.2E-72 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 IX88_13185 f3cc4b08b42d77dcf1e9c3a4589172ea 879 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 384 3.0E-92 T 11-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 IX88_13185 f3cc4b08b42d77dcf1e9c3a4589172ea 879 ProSitePatterns PS00450 Aconitase family signature 1. 710 727 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 IX88_13185 f3cc4b08b42d77dcf1e9c3a4589172ea 879 SUPERFAMILY SSF53732 381 865 4.19E-144 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 IX88_13185 f3cc4b08b42d77dcf1e9c3a4589172ea 879 Gene3D G3DSA:3.40.1060.10 387 689 1.5E-145 T 11-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 IX88_13185 f3cc4b08b42d77dcf1e9c3a4589172ea 879 SUPERFAMILY SSF74778 2 159 1.01E-67 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 IX88_13185 f3cc4b08b42d77dcf1e9c3a4589172ea 879 Gene3D G3DSA:3.30.499.10 691 874 1.1E-67 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 IX88_17095 adcbc65704f9448ef3abf932e7e7b8bb 489 Gene3D G3DSA:1.10.150.380 306 427 8.1E-34 T 11-10-2018 IX88_17095 adcbc65704f9448ef3abf932e7e7b8bb 489 Gene3D G3DSA:1.10.10.410 429 489 9.6E-26 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal IX88_17095 adcbc65704f9448ef3abf932e7e7b8bb 489 SMART SM00845 337 488 9.2E-80 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 IX88_17095 adcbc65704f9448ef3abf932e7e7b8bb 489 SUPERFAMILY SSF55931 14 305 1.5E-115 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 IX88_17095 adcbc65704f9448ef3abf932e7e7b8bb 489 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 154 168 - T 11-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 IX88_17095 adcbc65704f9448ef3abf932e7e7b8bb 489 Pfam PF02934 GatB/GatE catalytic domain 15 298 3.7E-108 T 11-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 IX88_17095 adcbc65704f9448ef3abf932e7e7b8bb 489 SUPERFAMILY SSF89095 306 413 5.49E-33 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 IX88_17095 adcbc65704f9448ef3abf932e7e7b8bb 489 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 12 489 37.672 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 IX88_17095 adcbc65704f9448ef3abf932e7e7b8bb 489 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 13 488 4.7E-164 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 IX88_17095 adcbc65704f9448ef3abf932e7e7b8bb 489 Pfam PF02637 GatB domain 337 488 7.3E-52 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 IX88_01980 3e1885924c6627abe73c664e04c1959e 474 SUPERFAMILY SSF46785 5 71 6.54E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_01980 3e1885924c6627abe73c664e04c1959e 474 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 1.5E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_01980 3e1885924c6627abe73c664e04c1959e 474 Pfam PF00155 Aminotransferase class I and II 135 449 1.3E-27 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 IX88_01980 3e1885924c6627abe73c664e04c1959e 474 SUPERFAMILY SSF53383 104 468 1.13E-78 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_01980 3e1885924c6627abe73c664e04c1959e 474 Gene3D G3DSA:3.90.1150.10 102 464 1.6E-81 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_01980 3e1885924c6627abe73c664e04c1959e 474 Gene3D G3DSA:3.40.640.10 142 360 1.6E-81 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_01980 3e1885924c6627abe73c664e04c1959e 474 SMART SM00345 8 67 1.4E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_01980 3e1885924c6627abe73c664e04c1959e 474 Gene3D G3DSA:1.10.10.10 1 69 1.7E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_06555 a9a5a63d1596482fb7dc65598824dcae 928 Gene3D G3DSA:3.90.1570.30 1 140 5.0E-8 T 11-10-2018 IX88_06555 a9a5a63d1596482fb7dc65598824dcae 928 SUPERFAMILY SSF52540 178 558 1.93E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_06555 a9a5a63d1596482fb7dc65598824dcae 928 SUPERFAMILY SSF52540 117 388 5.44E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_06555 a9a5a63d1596482fb7dc65598824dcae 928 Gene3D G3DSA:3.40.50.300 362 597 8.4E-49 T 11-10-2018 IX88_06555 a9a5a63d1596482fb7dc65598824dcae 928 Pfam PF04851 Type III restriction enzyme, res subunit 156 347 1.6E-36 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 IX88_06555 a9a5a63d1596482fb7dc65598824dcae 928 Pfam PF08463 EcoEI R protein C-terminal 748 926 1.5E-48 T 11-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 IX88_06555 a9a5a63d1596482fb7dc65598824dcae 928 Pfam PF00271 Helicase conserved C-terminal domain 448 552 1.5E-4 T 11-10-2018 IPR001650 Helicase, C-terminal IX88_06555 a9a5a63d1596482fb7dc65598824dcae 928 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 43 117 1.0E-8 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 IX88_06555 a9a5a63d1596482fb7dc65598824dcae 928 SMART SM00487 153 379 1.4E-15 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain IX88_06555 a9a5a63d1596482fb7dc65598824dcae 928 Gene3D G3DSA:3.40.50.300 143 360 4.6E-41 T 11-10-2018 IX88_08705 3aa8763a1601bdfbc617c9df2b493d11 323 SUPERFAMILY SSF51412 1 315 1.31E-70 T 11-10-2018 IX88_08705 3aa8763a1601bdfbc617c9df2b493d11 323 Pfam PF03060 Nitronate monooxygenase 3 310 1.4E-62 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 IX88_08705 3aa8763a1601bdfbc617c9df2b493d11 323 Gene3D G3DSA:3.20.20.70 1 323 4.0E-117 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_06520 8d69f613800c863c965dd975d3f6657b 383 Pfam PF00529 HlyD membrane-fusion protein of T1SS 51 379 1.9E-16 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 IX88_06520 8d69f613800c863c965dd975d3f6657b 383 Gene3D G3DSA:1.10.287.470 99 124 2.3E-13 T 11-10-2018 IX88_06520 8d69f613800c863c965dd975d3f6657b 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 322 9.2E-15 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IX88_06520 8d69f613800c863c965dd975d3f6657b 383 Gene3D G3DSA:2.40.50.100 65 98 2.3E-13 T 11-10-2018 IX88_06520 8d69f613800c863c965dd975d3f6657b 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 368 383 8.3E-7 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 IX88_06520 8d69f613800c863c965dd975d3f6657b 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 262 283 8.3E-7 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 IX88_06520 8d69f613800c863c965dd975d3f6657b 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 77 97 8.3E-7 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 IX88_06520 8d69f613800c863c965dd975d3f6657b 383 Gene3D G3DSA:2.40.30.170 264 382 1.2E-33 T 11-10-2018 IX88_06520 8d69f613800c863c965dd975d3f6657b 383 SUPERFAMILY SSF111369 144 202 1.31E-6 T 11-10-2018 IX88_06520 8d69f613800c863c965dd975d3f6657b 383 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 26 378 3.8E-121 T 11-10-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 IX88_06520 8d69f613800c863c965dd975d3f6657b 383 Gene3D G3DSA:1.10.287.470 140 207 1.8E-11 T 11-10-2018 IX88_06520 8d69f613800c863c965dd975d3f6657b 383 SUPERFAMILY SSF111369 198 301 2.35E-13 T 11-10-2018 IX88_06520 8d69f613800c863c965dd975d3f6657b 383 SUPERFAMILY SSF111369 63 153 1.11E-9 T 11-10-2018 IX88_01715 a9bb3d4345b87728e65cf79892c3817b 282 Pfam PF00581 Rhodanese-like domain 157 268 4.0E-17 T 11-10-2018 IPR001763 Rhodanese-like domain IX88_01715 a9bb3d4345b87728e65cf79892c3817b 282 Pfam PF00581 Rhodanese-like domain 14 122 6.6E-13 T 11-10-2018 IPR001763 Rhodanese-like domain IX88_01715 a9bb3d4345b87728e65cf79892c3817b 282 SUPERFAMILY SSF52821 148 280 5.63E-30 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily IX88_01715 a9bb3d4345b87728e65cf79892c3817b 282 SUPERFAMILY SSF52821 6 132 6.16E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily IX88_01715 a9bb3d4345b87728e65cf79892c3817b 282 ProSitePatterns PS00683 Rhodanese C-terminal signature. 257 267 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 IX88_01715 a9bb3d4345b87728e65cf79892c3817b 282 Gene3D G3DSA:3.40.250.10 150 276 5.1E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily IX88_01715 a9bb3d4345b87728e65cf79892c3817b 282 Gene3D G3DSA:3.40.250.10 6 140 2.4E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily IX88_01715 a9bb3d4345b87728e65cf79892c3817b 282 SMART SM00450 154 273 2.9E-20 T 11-10-2018 IPR001763 Rhodanese-like domain IX88_01715 a9bb3d4345b87728e65cf79892c3817b 282 SMART SM00450 12 127 1.4E-12 T 11-10-2018 IPR001763 Rhodanese-like domain IX88_13925 5dc0393a8a47064924318c61a2bc4d34 513 PIRSF PIRSF000485 1 484 1.1E-163 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 IX88_13925 5dc0393a8a47064924318c61a2bc4d34 513 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 467 44.684 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 IX88_13925 5dc0393a8a47064924318c61a2bc4d34 513 Gene3D G3DSA:3.60.20.10 2 468 3.2E-149 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IX88_13925 5dc0393a8a47064924318c61a2bc4d34 513 Gene3D G3DSA:3.40.50.2020 276 446 3.2E-149 T 11-10-2018 IX88_13925 5dc0393a8a47064924318c61a2bc4d34 513 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 467 2.5E-156 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 IX88_13925 5dc0393a8a47064924318c61a2bc4d34 513 SUPERFAMILY SSF53271 251 486 6.29E-71 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like IX88_13925 5dc0393a8a47064924318c61a2bc4d34 513 SUPERFAMILY SSF56235 2 258 3.95E-71 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IX88_13925 5dc0393a8a47064924318c61a2bc4d34 513 Pfam PF13522 Glutamine amidotransferase domain 65 208 6.3E-16 T 11-10-2018 IX88_13925 5dc0393a8a47064924318c61a2bc4d34 513 Pfam PF00156 Phosphoribosyl transferase domain 276 395 4.0E-10 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 IX88_01575 364bff9196114c99f49a3d75198b5040 627 SMART SM00387 26 173 8.3E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_01575 364bff9196114c99f49a3d75198b5040 627 Pfam PF01751 Toprim domain 413 507 1.7E-12 T 11-10-2018 IPR006171 TOPRIM domain IX88_01575 364bff9196114c99f49a3d75198b5040 627 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 621 3.2E-287 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_01575 364bff9196114c99f49a3d75198b5040 627 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 555 617 4.6E-23 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 IX88_01575 364bff9196114c99f49a3d75198b5040 627 Gene3D G3DSA:3.30.565.10 1 215 4.8E-73 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_01575 364bff9196114c99f49a3d75198b5040 627 Gene3D G3DSA:3.40.50.670 389 620 2.3E-93 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IX88_01575 364bff9196114c99f49a3d75198b5040 627 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 170 4.0E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 2.6E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 2.6E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 2.6E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 134 148 2.6E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 2.6E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 25 38 2.6E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 2.6E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 2.6E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 2.6E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 2.6E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 2.6E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 2.6E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 581 595 2.6E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 2.6E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_01575 364bff9196114c99f49a3d75198b5040 627 SUPERFAMILY SSF56719 388 618 4.71E-78 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 IX88_01575 364bff9196114c99f49a3d75198b5040 627 SMART SM00433 33 621 2.5E-206 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IX88_01575 364bff9196114c99f49a3d75198b5040 627 Pfam PF00204 DNA gyrase B 218 385 1.8E-39 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IX88_01575 364bff9196114c99f49a3d75198b5040 627 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 479 495 4.1E-59 T 11-10-2018 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 559 575 4.1E-59 T 11-10-2018 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 497 514 4.1E-59 T 11-10-2018 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 517 529 4.1E-59 T 11-10-2018 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 30 45 4.1E-59 T 11-10-2018 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 108 122 4.1E-59 T 11-10-2018 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 266 279 4.1E-59 T 11-10-2018 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 414 428 4.1E-59 T 11-10-2018 IX88_01575 364bff9196114c99f49a3d75198b5040 627 PRINTS PR00418 DNA topoisomerase II family signature 65 78 4.1E-59 T 11-10-2018 IX88_01575 364bff9196114c99f49a3d75198b5040 627 SUPERFAMILY SSF54211 217 382 1.44E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_01575 364bff9196114c99f49a3d75198b5040 627 Gene3D G3DSA:3.30.230.10 216 388 3.0E-52 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IX88_01575 364bff9196114c99f49a3d75198b5040 627 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 1 625 46.512 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_01575 364bff9196114c99f49a3d75198b5040 627 SUPERFAMILY SSF55874 3 214 5.76E-62 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_00555 77a33990dcb7a3ebf652af32490bd15e 343 Pfam PF03280 Proteobacterial lipase chaperone protein 132 322 1.5E-49 T 11-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 IX88_00555 77a33990dcb7a3ebf652af32490bd15e 343 SUPERFAMILY SSF158855 60 334 1.96E-86 T 11-10-2018 IX88_00555 77a33990dcb7a3ebf652af32490bd15e 343 Hamap MF_00790 Lipase chaperone [lifO]. 5 331 19.649 T 11-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 IX88_00520 b2891c90dae7e017d72a0119ec718c96 469 Gene3D G3DSA:3.30.43.10 1 98 7.1E-27 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 IX88_00520 b2891c90dae7e017d72a0119ec718c96 469 Gene3D G3DSA:1.10.45.10 427 466 1.4E-14 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 IX88_00520 b2891c90dae7e017d72a0119ec718c96 469 SUPERFAMILY SSF56176 4 222 1.73E-67 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 IX88_00520 b2891c90dae7e017d72a0119ec718c96 469 Gene3D G3DSA:3.30.465.10 100 220 2.2E-39 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 IX88_00520 b2891c90dae7e017d72a0119ec718c96 469 Pfam PF02913 FAD linked oxidases, C-terminal domain 222 466 1.2E-61 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 IX88_00520 b2891c90dae7e017d72a0119ec718c96 469 Gene3D G3DSA:3.30.70.2190 222 338 1.6E-25 T 11-10-2018 IX88_00520 b2891c90dae7e017d72a0119ec718c96 469 Gene3D G3DSA:3.30.70.2740 341 426 4.2E-27 T 11-10-2018 IX88_00520 b2891c90dae7e017d72a0119ec718c96 469 SUPERFAMILY SSF55103 226 468 4.25E-61 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 IX88_00520 b2891c90dae7e017d72a0119ec718c96 469 Pfam PF01565 FAD binding domain 46 184 7.6E-40 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 IX88_12940 f5bd002b3c3d7c2b70ef44659d9a2f0a 169 SUPERFAMILY SSF48295 4 60 1.15E-9 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 IX88_12940 f5bd002b3c3d7c2b70ef44659d9a2f0a 169 SUPERFAMILY SSF46689 59 164 2.69E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_12940 f5bd002b3c3d7c2b70ef44659d9a2f0a 169 Pfam PF13518 Helix-turn-helix domain 67 113 2.9E-7 T 11-10-2018 IX88_12940 f5bd002b3c3d7c2b70ef44659d9a2f0a 169 Pfam PF13518 Helix-turn-helix domain 11 55 2.1E-7 T 11-10-2018 IX88_16270 f5bd002b3c3d7c2b70ef44659d9a2f0a 169 SUPERFAMILY SSF48295 4 60 1.15E-9 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 IX88_16270 f5bd002b3c3d7c2b70ef44659d9a2f0a 169 SUPERFAMILY SSF46689 59 164 2.69E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_16270 f5bd002b3c3d7c2b70ef44659d9a2f0a 169 Pfam PF13518 Helix-turn-helix domain 67 113 2.9E-7 T 11-10-2018 IX88_16270 f5bd002b3c3d7c2b70ef44659d9a2f0a 169 Pfam PF13518 Helix-turn-helix domain 11 55 2.1E-7 T 11-10-2018 IX88_07665 bd6e221e7d61b0e8e8bd940acc5112b5 431 Pfam PF00324 Amino acid permease 1 399 3.7E-109 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 IX88_07665 bd6e221e7d61b0e8e8bd940acc5112b5 431 Gene3D G3DSA:1.20.1740.10 1 430 3.1E-58 T 11-10-2018 IX88_07665 bd6e221e7d61b0e8e8bd940acc5112b5 431 PIRSF PIRSF006060 1 431 2.5E-73 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_07665 bd6e221e7d61b0e8e8bd940acc5112b5 431 ProSitePatterns PS00218 Amino acid permeases signature. 20 50 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 IX88_18280 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 121 144 3.1E-92 T 11-10-2018 IX88_18280 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 181 204 3.1E-92 T 11-10-2018 IX88_18280 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 155 180 3.1E-92 T 11-10-2018 IX88_18280 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 273 292 3.1E-92 T 11-10-2018 IX88_18280 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 28 46 3.1E-92 T 11-10-2018 IX88_18280 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 376 394 3.1E-92 T 11-10-2018 IX88_18280 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 80 100 3.1E-92 T 11-10-2018 IX88_18280 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 321 343 3.1E-92 T 11-10-2018 IX88_18280 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 408 426 3.1E-92 T 11-10-2018 IX88_18280 292a0f240ab2ffafe52e05a99105a360 450 ProSitePatterns PS00755 Protein secY signature 1. 81 100 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IX88_18280 292a0f240ab2ffafe52e05a99105a360 450 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 26 435 2.7E-125 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IX88_18280 292a0f240ab2ffafe52e05a99105a360 450 SUPERFAMILY SSF103491 9 430 4.45E-127 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IX88_18280 292a0f240ab2ffafe52e05a99105a360 450 Pfam PF00344 SecY translocase 81 423 5.6E-113 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IX88_18280 292a0f240ab2ffafe52e05a99105a360 450 Hamap MF_01465 Protein translocase subunit SecY [secY]. 15 439 28.378 T 11-10-2018 IPR026593 Protein translocase subunit SecY IX88_18280 292a0f240ab2ffafe52e05a99105a360 450 PIRSF PIRSF004557 9 445 5.3E-121 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IX88_18280 292a0f240ab2ffafe52e05a99105a360 450 Gene3D G3DSA:1.10.3370.10 12 435 9.7E-158 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IX88_00065 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 121 144 3.1E-92 T 11-10-2018 IX88_00065 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 181 204 3.1E-92 T 11-10-2018 IX88_00065 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 155 180 3.1E-92 T 11-10-2018 IX88_00065 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 273 292 3.1E-92 T 11-10-2018 IX88_00065 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 28 46 3.1E-92 T 11-10-2018 IX88_00065 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 376 394 3.1E-92 T 11-10-2018 IX88_00065 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 80 100 3.1E-92 T 11-10-2018 IX88_00065 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 321 343 3.1E-92 T 11-10-2018 IX88_00065 292a0f240ab2ffafe52e05a99105a360 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 408 426 3.1E-92 T 11-10-2018 IX88_00065 292a0f240ab2ffafe52e05a99105a360 450 ProSitePatterns PS00755 Protein secY signature 1. 81 100 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IX88_00065 292a0f240ab2ffafe52e05a99105a360 450 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 26 435 2.7E-125 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IX88_00065 292a0f240ab2ffafe52e05a99105a360 450 SUPERFAMILY SSF103491 9 430 4.45E-127 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IX88_00065 292a0f240ab2ffafe52e05a99105a360 450 Pfam PF00344 SecY translocase 81 423 5.6E-113 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IX88_00065 292a0f240ab2ffafe52e05a99105a360 450 Hamap MF_01465 Protein translocase subunit SecY [secY]. 15 439 28.378 T 11-10-2018 IPR026593 Protein translocase subunit SecY IX88_00065 292a0f240ab2ffafe52e05a99105a360 450 PIRSF PIRSF004557 9 445 5.3E-121 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IX88_00065 292a0f240ab2ffafe52e05a99105a360 450 Gene3D G3DSA:1.10.3370.10 12 435 9.7E-158 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IX88_07745 e6d70922f3646d7e1a8305d0d62ce749 452 Pfam PF07690 Major Facilitator Superfamily 29 322 3.3E-53 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_07745 e6d70922f3646d7e1a8305d0d62ce749 452 PIRSF PIRSF002808 2 451 1.4E-45 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 IX88_07745 e6d70922f3646d7e1a8305d0d62ce749 452 SUPERFAMILY SSF103473 14 447 6.67E-84 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_07745 e6d70922f3646d7e1a8305d0d62ce749 452 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 31 440 2.0E-140 T 11-10-2018 IX88_07745 e6d70922f3646d7e1a8305d0d62ce749 452 Gene3D G3DSA:1.20.1250.20 14 215 6.6E-48 T 11-10-2018 IX88_07745 e6d70922f3646d7e1a8305d0d62ce749 452 Gene3D G3DSA:1.20.1250.20 246 447 1.9E-33 T 11-10-2018 IX88_11135 f77c47155f434059bb5361bdce1443cd 294 Pfam PF12833 Helix-turn-helix domain 214 288 1.7E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_11135 f77c47155f434059bb5361bdce1443cd 294 Gene3D G3DSA:1.10.10.60 188 292 3.6E-28 T 11-10-2018 IX88_11135 f77c47155f434059bb5361bdce1443cd 294 SMART SM00342 208 291 3.8E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_11135 f77c47155f434059bb5361bdce1443cd 294 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 179 1.5E-47 T 11-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal IX88_11135 f77c47155f434059bb5361bdce1443cd 294 SUPERFAMILY SSF46689 244 291 9.41E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_11135 f77c47155f434059bb5361bdce1443cd 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 245 287 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 IX88_11135 f77c47155f434059bb5361bdce1443cd 294 SUPERFAMILY SSF46689 192 242 6.28E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_15910 1ad6ca9e8a804f02032e2b0f518e53e1 228 Pfam PF01902 Diphthamide synthase 14 224 1.1E-46 T 11-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 IX88_15910 1ad6ca9e8a804f02032e2b0f518e53e1 228 Gene3D G3DSA:3.40.50.620 10 148 1.4E-24 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_15910 1ad6ca9e8a804f02032e2b0f518e53e1 228 SUPERFAMILY SSF52402 15 224 4.41E-60 T 11-10-2018 IX88_15910 1ad6ca9e8a804f02032e2b0f518e53e1 228 Gene3D G3DSA:3.90.1490.10 150 228 1.7E-13 T 11-10-2018 IX88_15910 1ad6ca9e8a804f02032e2b0f518e53e1 228 TIGRFAM TIGR00290 MJ0570_dom: MJ0570-related uncharacterized domain 15 225 1.7E-45 T 11-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 IX88_14760 1429c6dfc20e736cd8454d7f29c473a2 600 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 134 1.6E-13 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 IX88_14760 1429c6dfc20e736cd8454d7f29c473a2 600 Pfam PF16189 Creatinase/Prolidase N-terminal domain 152 309 4.0E-38 T 11-10-2018 IX88_14760 1429c6dfc20e736cd8454d7f29c473a2 600 Pfam PF00557 Metallopeptidase family M24 312 526 1.2E-44 T 11-10-2018 IPR000994 Peptidase M24 IX88_14760 1429c6dfc20e736cd8454d7f29c473a2 600 Gene3D G3DSA:3.40.350.10 1 150 2.0E-41 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal IX88_14760 1429c6dfc20e736cd8454d7f29c473a2 600 Pfam PF16188 C-terminal region of peptidase_M24 540 600 1.2E-22 T 11-10-2018 IPR032416 Peptidase M24, C-terminal domain IX88_14760 1429c6dfc20e736cd8454d7f29c473a2 600 SUPERFAMILY SSF55920 307 566 7.2E-54 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like IX88_14760 1429c6dfc20e736cd8454d7f29c473a2 600 SUPERFAMILY SSF53092 8 132 1.92E-9 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal IX88_14760 1429c6dfc20e736cd8454d7f29c473a2 600 Gene3D G3DSA:3.90.230.10 304 600 4.3E-95 T 11-10-2018 IX88_14760 1429c6dfc20e736cd8454d7f29c473a2 600 Gene3D G3DSA:3.40.350.10 151 298 4.8E-34 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal IX88_15875 1c348883ffdd06ea95caf49ac09f1a7c 353 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 7.6E-122 T 11-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 IX88_15875 1c348883ffdd06ea95caf49ac09f1a7c 353 SMART SM00382 27 214 9.2E-21 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_15875 1c348883ffdd06ea95caf49ac09f1a7c 353 SUPERFAMILY SSF52540 3 243 8.57E-87 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_15875 1c348883ffdd06ea95caf49ac09f1a7c 353 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_15875 1c348883ffdd06ea95caf49ac09f1a7c 353 Pfam PF12857 TOBE-like domain 287 341 1.7E-7 T 11-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 IX88_15875 1c348883ffdd06ea95caf49ac09f1a7c 353 SUPERFAMILY SSF50331 240 348 6.8E-8 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal IX88_15875 1c348883ffdd06ea95caf49ac09f1a7c 353 Pfam PF00005 ABC transporter 18 164 8.3E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_15875 1c348883ffdd06ea95caf49ac09f1a7c 353 Gene3D G3DSA:3.40.50.300 2 289 6.1E-82 T 11-10-2018 IX88_06695 dc081e3b89bd94ce59d3f9a563837918 113 Gene3D G3DSA:3.10.50.40 2 113 1.2E-42 T 11-10-2018 IX88_06695 dc081e3b89bd94ce59d3f9a563837918 113 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 16 105 4.9E-33 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain IX88_06695 dc081e3b89bd94ce59d3f9a563837918 113 SUPERFAMILY SSF54534 4 111 2.75E-40 T 11-10-2018 IX88_12780 533df7c8fe3f85ad8ea3c451d064949c 593 Gene3D G3DSA:3.40.390.10 434 567 1.7E-5 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 IX88_12780 533df7c8fe3f85ad8ea3c451d064949c 593 SUPERFAMILY SSF55486 394 553 1.27E-12 T 11-10-2018 IX88_12780 533df7c8fe3f85ad8ea3c451d064949c 593 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 421 529 1.1E-5 T 11-10-2018 IX88_12780 533df7c8fe3f85ad8ea3c451d064949c 593 Gene3D G3DSA:2.60.120.1230 117 210 8.2E-6 T 11-10-2018 IX88_12780 533df7c8fe3f85ad8ea3c451d064949c 593 Gene3D G3DSA:2.60.120.1230 304 397 5.6E-7 T 11-10-2018 IX88_12780 533df7c8fe3f85ad8ea3c451d064949c 593 Gene3D G3DSA:2.60.120.1230 15 116 5.9E-11 T 11-10-2018 IX88_12780 533df7c8fe3f85ad8ea3c451d064949c 593 Gene3D G3DSA:2.60.120.1230 211 303 6.4E-11 T 11-10-2018 IX88_17925 fa0abc8e5307b3dba02dd03bfcc7479a 279 SUPERFAMILY SSF56300 7 267 8.7E-49 T 11-10-2018 IX88_17925 fa0abc8e5307b3dba02dd03bfcc7479a 279 PIRSF PIRSF000903 4 278 8.1E-93 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 IX88_17925 fa0abc8e5307b3dba02dd03bfcc7479a 279 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 6 275 9.8E-82 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 IX88_17925 fa0abc8e5307b3dba02dd03bfcc7479a 279 Gene3D G3DSA:3.60.21.10 6 278 8.9E-65 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like IX88_17925 fa0abc8e5307b3dba02dd03bfcc7479a 279 Pfam PF00149 Calcineurin-like phosphoesterase 8 132 2.1E-13 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 IX88_05315 3a98fb334baa3cf9b81b4a73cf1eb83d 322 Gene3D G3DSA:3.60.40.10 94 320 6.0E-42 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 IX88_05315 3a98fb334baa3cf9b81b4a73cf1eb83d 322 SMART SM00331 126 320 7.6E-11 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 IX88_05315 3a98fb334baa3cf9b81b4a73cf1eb83d 322 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 153 313 3.5E-23 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 IX88_16840 189b9c0beff03fe3f87d12928536c1ae 208 Gene3D G3DSA:1.20.144.10 109 206 1.8E-21 T 11-10-2018 IX88_16840 189b9c0beff03fe3f87d12928536c1ae 208 Gene3D G3DSA:1.20.144.10 5 108 1.6E-6 T 11-10-2018 IX88_16840 189b9c0beff03fe3f87d12928536c1ae 208 SUPERFAMILY SSF48317 4 200 8.76E-34 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily IX88_16840 189b9c0beff03fe3f87d12928536c1ae 208 SMART SM00014 79 191 3.3E-16 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase IX88_16840 189b9c0beff03fe3f87d12928536c1ae 208 Pfam PF01569 PAP2 superfamily 82 195 8.2E-20 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase IX88_01750 a227796ab471f0abb5c9026ec82f8fc2 373 Pfam PF00925 GTP cyclohydrolase II 210 365 4.0E-29 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 IX88_01750 a227796ab471f0abb5c9026ec82f8fc2 373 SUPERFAMILY SSF55821 2 202 1.53E-85 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily IX88_01750 a227796ab471f0abb5c9026ec82f8fc2 373 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.835 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 IX88_01750 a227796ab471f0abb5c9026ec82f8fc2 373 Gene3D G3DSA:3.90.870.10 1 206 3.0E-87 T 11-10-2018 IX88_01750 a227796ab471f0abb5c9026ec82f8fc2 373 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 2.7E-83 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 IX88_01750 a227796ab471f0abb5c9026ec82f8fc2 373 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 1.3E-74 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 IX88_01750 a227796ab471f0abb5c9026ec82f8fc2 373 PIRSF PIRSF001259 2 373 5.0E-115 T 11-10-2018 IX88_01750 a227796ab471f0abb5c9026ec82f8fc2 373 SUPERFAMILY SSF142695 205 365 3.92E-35 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 IX88_03570 0a6e36ca9519d180cb07b43cc7bcc6ee 278 Gene3D G3DSA:2.30.42.10 176 276 5.2E-13 T 11-10-2018 IX88_03570 0a6e36ca9519d180cb07b43cc7bcc6ee 278 Gene3D G3DSA:2.30.30.830 78 148 8.8E-8 T 11-10-2018 IX88_03570 0a6e36ca9519d180cb07b43cc7bcc6ee 278 SMART SM00228 200 269 7.0E-4 T 11-10-2018 IPR001478 PDZ domain GO:0005515 IX88_03570 0a6e36ca9519d180cb07b43cc7bcc6ee 278 SUPERFAMILY SSF50156 186 275 2.76E-13 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 IX88_03570 0a6e36ca9519d180cb07b43cc7bcc6ee 278 Pfam PF11356 Type II secretion system protein C 26 139 5.5E-15 T 11-10-2018 IPR024961 Type II secretion system protein C, N-terminal IX88_11110 14d24a2b749764385c3d0c720569fdc6 338 SUPERFAMILY SSF81345 11 330 3.66E-70 T 11-10-2018 IPR037294 ABC transporter, BtuC-like IX88_11110 14d24a2b749764385c3d0c720569fdc6 338 Gene3D G3DSA:1.10.3470.10 6 337 3.9E-88 T 11-10-2018 IPR037294 ABC transporter, BtuC-like IX88_11110 14d24a2b749764385c3d0c720569fdc6 338 Pfam PF01032 FecCD transport family 16 330 4.3E-77 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 IX88_03065 707060f4fa3735f2862bc0733da0ae31 289 Pfam PF00231 ATP synthase 3 288 7.2E-95 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03065 707060f4fa3735f2862bc0733da0ae31 289 Gene3D G3DSA:3.40.1380.10 61 208 1.7E-103 T 11-10-2018 IX88_03065 707060f4fa3735f2862bc0733da0ae31 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 289 36.129 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03065 707060f4fa3735f2862bc0733da0ae31 289 Gene3D G3DSA:1.10.287.80 6 285 1.7E-103 T 11-10-2018 IX88_03065 707060f4fa3735f2862bc0733da0ae31 289 PRINTS PR00126 ATP synthase gamma subunit signature 267 288 2.9E-34 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03065 707060f4fa3735f2862bc0733da0ae31 289 PRINTS PR00126 ATP synthase gamma subunit signature 236 255 2.9E-34 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03065 707060f4fa3735f2862bc0733da0ae31 289 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 2.9E-34 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03065 707060f4fa3735f2862bc0733da0ae31 289 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 2.9E-34 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03065 707060f4fa3735f2862bc0733da0ae31 289 SUPERFAMILY SSF52943 2 289 8.24E-93 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03065 707060f4fa3735f2862bc0733da0ae31 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 289 9.3E-105 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03065 707060f4fa3735f2862bc0733da0ae31 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 275 288 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_15520 4afae4018687fbed6cc1b305419f7c48 432 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 430 8.6E-189 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 IX88_15520 4afae4018687fbed6cc1b305419f7c48 432 Gene3D G3DSA:3.90.1150.10 10 424 3.3E-176 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_15520 4afae4018687fbed6cc1b305419f7c48 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 275 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_15520 4afae4018687fbed6cc1b305419f7c48 432 SUPERFAMILY SSF53383 5 430 3.6E-129 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_15520 4afae4018687fbed6cc1b305419f7c48 432 Gene3D G3DSA:3.40.640.10 72 322 3.3E-176 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_15520 4afae4018687fbed6cc1b305419f7c48 432 Pfam PF00202 Aminotransferase class-III 35 401 7.2E-77 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_15520 4afae4018687fbed6cc1b305419f7c48 432 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 431 105.433 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 IX88_00365 3e0d58636d142cb577bca385079ba661 325 Gene3D G3DSA:3.30.930.10 3 216 5.0E-113 T 11-10-2018 IX88_00365 3e0d58636d142cb577bca385079ba661 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 1.3E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IX88_00365 3e0d58636d142cb577bca385079ba661 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 1.3E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IX88_00365 3e0d58636d142cb577bca385079ba661 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 1.3E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IX88_00365 3e0d58636d142cb577bca385079ba661 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 1.3E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IX88_00365 3e0d58636d142cb577bca385079ba661 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 1.3E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IX88_00365 3e0d58636d142cb577bca385079ba661 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 1.3E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IX88_00365 3e0d58636d142cb577bca385079ba661 325 Gene3D G3DSA:1.20.58.180 217 298 2.4E-35 T 11-10-2018 IX88_00365 3e0d58636d142cb577bca385079ba661 325 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 291 1.7E-153 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IX88_00365 3e0d58636d142cb577bca385079ba661 325 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 293 61.33 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IX88_00365 3e0d58636d142cb577bca385079ba661 325 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 299 3.8E-163 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IX88_00365 3e0d58636d142cb577bca385079ba661 325 SUPERFAMILY SSF55681 10 292 4.97E-137 T 11-10-2018 IX88_08925 eb197fdc285b4b3a666898332b71e9ea 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 4.7E-20 T 11-10-2018 IX88_08925 eb197fdc285b4b3a666898332b71e9ea 151 Gene3D G3DSA:1.10.10.10 1 54 3.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_08925 eb197fdc285b4b3a666898332b71e9ea 151 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 1.2E-18 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IX88_08925 eb197fdc285b4b3a666898332b71e9ea 151 SUPERFAMILY SSF54909 61 150 2.55E-17 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel IX88_08925 eb197fdc285b4b3a666898332b71e9ea 151 Gene3D G3DSA:3.30.70.920 55 137 4.2E-20 T 11-10-2018 IX88_08925 eb197fdc285b4b3a666898332b71e9ea 151 SMART SM00344 1 110 5.9E-47 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 IX88_08925 eb197fdc285b4b3a666898332b71e9ea 151 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site IX88_08925 eb197fdc285b4b3a666898332b71e9ea 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.3E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_08925 eb197fdc285b4b3a666898332b71e9ea 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.3E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_08925 eb197fdc285b4b3a666898332b71e9ea 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.3E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_08925 eb197fdc285b4b3a666898332b71e9ea 151 SUPERFAMILY SSF46785 1 61 9.48E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_00425 72964c82fb05763350f3fd414475a00b 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 IX88_00425 72964c82fb05763350f3fd414475a00b 489 SUPERFAMILY SSF53720 4 457 1.07E-121 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_00425 72964c82fb05763350f3fd414475a00b 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 IX88_00425 72964c82fb05763350f3fd414475a00b 489 Pfam PF00171 Aldehyde dehydrogenase family 11 461 1.0E-119 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_00425 72964c82fb05763350f3fd414475a00b 489 Gene3D G3DSA:3.40.309.10 249 439 3.1E-141 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_00425 72964c82fb05763350f3fd414475a00b 489 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 3 488 58.073 T 11-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 IX88_00425 72964c82fb05763350f3fd414475a00b 489 Gene3D G3DSA:3.40.605.10 9 451 3.1E-141 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_00425 72964c82fb05763350f3fd414475a00b 489 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 5 487 6.0E-257 T 11-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 IX88_17705 083690ff4520ec729b97d35a3a3728d8 916 SUPERFAMILY SSF81301 481 772 3.24E-78 T 11-10-2018 IX88_17705 083690ff4520ec729b97d35a3a3728d8 916 Pfam PF08335 GlnD PII-uridylyltransferase 785 880 9.2E-10 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 IX88_17705 083690ff4520ec729b97d35a3a3728d8 916 Pfam PF08335 GlnD PII-uridylyltransferase 270 409 2.4E-42 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 IX88_17705 083690ff4520ec729b97d35a3a3728d8 916 Gene3D G3DSA:1.20.120.330 258 413 2.8E-50 T 11-10-2018 IX88_17705 083690ff4520ec729b97d35a3a3728d8 916 SUPERFAMILY SSF81593 774 905 2.82E-30 T 11-10-2018 IX88_17705 083690ff4520ec729b97d35a3a3728d8 916 SUPERFAMILY SSF81301 3 259 2.45E-67 T 11-10-2018 IX88_17705 083690ff4520ec729b97d35a3a3728d8 916 Gene3D G3DSA:1.20.120.330 770 907 6.6E-43 T 11-10-2018 IX88_17705 083690ff4520ec729b97d35a3a3728d8 916 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 1 907 18.342 T 11-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 IX88_17705 083690ff4520ec729b97d35a3a3728d8 916 Gene3D G3DSA:3.30.460.100 13 254 2.1E-59 T 11-10-2018 IX88_17705 083690ff4520ec729b97d35a3a3728d8 916 Gene3D G3DSA:3.30.460.100 518 769 1.9E-78 T 11-10-2018 IX88_17705 083690ff4520ec729b97d35a3a3728d8 916 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 4 244 2.8E-61 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 IX88_17705 083690ff4520ec729b97d35a3a3728d8 916 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 509 762 6.6E-71 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 IX88_17705 083690ff4520ec729b97d35a3a3728d8 916 SUPERFAMILY SSF81593 260 409 2.2E-40 T 11-10-2018 IX88_17480 cd8b716a5a56839ec8116caae0b637da 436 ProSitePatterns PS00216 Sugar transport proteins signature 1. 301 316 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_17480 cd8b716a5a56839ec8116caae0b637da 436 Pfam PF00083 Sugar (and other) transporter 22 228 1.8E-23 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 IX88_17480 cd8b716a5a56839ec8116caae0b637da 436 Pfam PF00083 Sugar (and other) transporter 258 431 1.3E-7 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 IX88_17480 cd8b716a5a56839ec8116caae0b637da 436 Gene3D G3DSA:1.20.1250.20 16 435 1.6E-64 T 11-10-2018 IX88_17480 cd8b716a5a56839ec8116caae0b637da 436 SUPERFAMILY SSF103473 16 432 1.96E-63 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_17480 cd8b716a5a56839ec8116caae0b637da 436 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 27 418 3.3E-138 T 11-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 IX88_10610 8a713207c9156f825793eea3ea007c97 213 Pfam PF01144 Coenzyme A transferase 7 199 1.4E-44 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 IX88_10610 8a713207c9156f825793eea3ea007c97 213 SUPERFAMILY SSF100950 3 209 3.18E-75 T 11-10-2018 IPR037171 NagB/RpiA transferase-like IX88_10610 8a713207c9156f825793eea3ea007c97 213 SMART SM00882 6 202 1.3E-77 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 IX88_10610 8a713207c9156f825793eea3ea007c97 213 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 207 1.6E-99 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 IX88_10610 8a713207c9156f825793eea3ea007c97 213 Gene3D G3DSA:3.40.1080.10 2 210 2.0E-103 T 11-10-2018 IX88_10610 8a713207c9156f825793eea3ea007c97 213 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 11-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 IX88_02305 57148d3e8047f059e7812095fa2e2a89 170 PIRSF PIRSF001338 7 167 1.8E-65 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 IX88_02305 57148d3e8047f059e7812095fa2e2a89 170 SUPERFAMILY SSF52255 11 166 2.22E-65 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 IX88_02305 57148d3e8047f059e7812095fa2e2a89 170 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 12 165 4.8E-64 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 IX88_02305 57148d3e8047f059e7812095fa2e2a89 170 Pfam PF00731 AIR carboxylase 12 159 1.5E-62 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 IX88_02305 57148d3e8047f059e7812095fa2e2a89 170 SMART SM01001 10 161 6.1E-101 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 IX88_02305 57148d3e8047f059e7812095fa2e2a89 170 Gene3D G3DSA:3.40.50.7700 2 169 2.5E-72 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 IX88_02305 57148d3e8047f059e7812095fa2e2a89 170 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 12 165 31.688 T 11-10-2018 IPR033747 Class I PurE IX88_01485 30940721dcb70ddb817605c6209f3c92 216 Gene3D G3DSA:3.40.50.2020 6 216 7.8E-77 T 11-10-2018 IX88_01485 30940721dcb70ddb817605c6209f3c92 216 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 14 191 5.4E-58 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 IX88_01485 30940721dcb70ddb817605c6209f3c92 216 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 216 33.431 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 IX88_01485 30940721dcb70ddb817605c6209f3c92 216 SUPERFAMILY SSF53271 10 199 6.29E-49 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like IX88_01485 30940721dcb70ddb817605c6209f3c92 216 Pfam PF00156 Phosphoribosyl transferase domain 47 163 1.3E-15 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 IX88_15080 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 3.6E-82 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 IX88_15080 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 8.7E-13 T 11-10-2018 IX88_15080 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 8.7E-13 T 11-10-2018 IX88_15080 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 8.7E-13 T 11-10-2018 IX88_15080 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 Gene3D G3DSA:3.40.50.880 1 193 5.6E-61 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_15080 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 SUPERFAMILY SSF52317 1 192 3.44E-54 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_15080 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 Pfam PF00117 Glutamine amidotransferase class-I 4 190 8.9E-53 T 11-10-2018 IPR017926 Glutamine amidotransferase IX88_15080 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.8E-34 T 11-10-2018 IX88_15080 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.8E-34 T 11-10-2018 IX88_15080 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.8E-34 T 11-10-2018 IX88_15080 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.8E-34 T 11-10-2018 IX88_15080 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.8E-34 T 11-10-2018 IX88_15080 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 169 182 1.8E-34 T 11-10-2018 IX88_17900 3280b310a1ef12da33b9b96433aeb908 269 SMART SM00563 83 194 5.4E-16 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 IX88_17900 3280b310a1ef12da33b9b96433aeb908 269 Pfam PF01553 Acyltransferase 72 186 3.8E-16 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 IX88_17900 3280b310a1ef12da33b9b96433aeb908 269 SUPERFAMILY SSF69593 30 266 1.44E-22 T 11-10-2018 IX88_08595 979fff97c73b6ff29913f778a4adfe17 308 SUPERFAMILY SSF46785 10 120 8.71E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_08595 979fff97c73b6ff29913f778a4adfe17 308 Gene3D G3DSA:1.10.10.10 9 96 4.3E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_08595 979fff97c73b6ff29913f778a4adfe17 308 SUPERFAMILY SSF53850 97 303 3.57E-32 T 11-10-2018 IX88_08595 979fff97c73b6ff29913f778a4adfe17 308 Gene3D G3DSA:3.40.190.290 99 303 2.4E-30 T 11-10-2018 IX88_08595 979fff97c73b6ff29913f778a4adfe17 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 71 1.5E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_08595 979fff97c73b6ff29913f778a4adfe17 308 Pfam PF03466 LysR substrate binding domain 99 296 2.0E-26 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_09535 170679e5a3de14517628f7ff598585c5 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 179 240 2.6E-15 T 11-10-2018 IPR016148 Pili assembly chaperone, C-terminal IX88_09535 170679e5a3de14517628f7ff598585c5 246 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 105 122 - T 11-10-2018 IPR018046 Pili assembly chaperone, conserved site IX88_09535 170679e5a3de14517628f7ff598585c5 246 Gene3D G3DSA:2.60.40.10 159 244 4.9E-19 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_09535 170679e5a3de14517628f7ff598585c5 246 PRINTS PR00969 Pili chaperone signature 27 36 5.5E-36 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 IX88_09535 170679e5a3de14517628f7ff598585c5 246 PRINTS PR00969 Pili chaperone signature 174 189 5.5E-36 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 IX88_09535 170679e5a3de14517628f7ff598585c5 246 PRINTS PR00969 Pili chaperone signature 106 123 5.5E-36 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 IX88_09535 170679e5a3de14517628f7ff598585c5 246 PRINTS PR00969 Pili chaperone signature 76 97 5.5E-36 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 IX88_09535 170679e5a3de14517628f7ff598585c5 246 PRINTS PR00969 Pili chaperone signature 139 154 5.5E-36 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 IX88_09535 170679e5a3de14517628f7ff598585c5 246 SUPERFAMILY SSF49354 23 157 1.63E-40 T 11-10-2018 IPR008962 PapD-like superfamily IX88_09535 170679e5a3de14517628f7ff598585c5 246 Gene3D G3DSA:2.60.40.10 28 158 3.3E-42 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_09535 170679e5a3de14517628f7ff598585c5 246 SUPERFAMILY SSF49584 159 243 2.09E-20 T 11-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily IX88_09535 170679e5a3de14517628f7ff598585c5 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 157 1.1E-42 T 11-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 IX88_06190 e850df76f698dd16afdd4b862003021d 350 Pfam PF00849 RNA pseudouridylate synthase 123 272 3.6E-30 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_06190 e850df76f698dd16afdd4b862003021d 350 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 166 180 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_06190 e850df76f698dd16afdd4b862003021d 350 SUPERFAMILY SSF55120 108 345 8.63E-75 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_06190 e850df76f698dd16afdd4b862003021d 350 Gene3D G3DSA:3.10.290.10 34 107 1.9E-16 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 IX88_06190 e850df76f698dd16afdd4b862003021d 350 Pfam PF01479 S4 domain 62 95 1.6E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_06190 e850df76f698dd16afdd4b862003021d 350 Gene3D G3DSA:3.30.2350.10 116 347 1.9E-68 T 11-10-2018 IX88_06190 e850df76f698dd16afdd4b862003021d 350 SMART SM00363 50 107 1.0E-4 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_06190 e850df76f698dd16afdd4b862003021d 350 SUPERFAMILY SSF55174 47 136 1.51E-9 T 11-10-2018 IX88_06190 e850df76f698dd16afdd4b862003021d 350 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 48 344 4.4E-91 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_16330 869404a040994633f1f4c7f2fd6221df 364 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 50 207 8.0E-39 T 11-10-2018 IPR017482 Putative phage-type endonuclease IX88_16330 869404a040994633f1f4c7f2fd6221df 364 Pfam PF09588 YqaJ-like viral recombinase domain 57 197 1.3E-34 T 11-10-2018 IPR019080 YqaJ viral recombinase IX88_16330 869404a040994633f1f4c7f2fd6221df 364 Gene3D G3DSA:3.90.320.10 53 259 5.0E-38 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal IX88_16330 869404a040994633f1f4c7f2fd6221df 364 SUPERFAMILY SSF52980 50 240 3.54E-32 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 IX88_01545 105a43953d23907c2c8f6bc88f08a97c 107 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 107 5.8E-39 T 11-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 IX88_01545 105a43953d23907c2c8f6bc88f08a97c 107 Pfam PF00576 HIUase/Transthyretin family 2 106 1.3E-35 T 11-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 IX88_01545 105a43953d23907c2c8f6bc88f08a97c 107 ProSitePatterns PS00768 Transthyretin signature 1. 5 20 - T 11-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 IX88_01545 105a43953d23907c2c8f6bc88f08a97c 107 SUPERFAMILY SSF49472 2 107 2.62E-37 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 IX88_01545 105a43953d23907c2c8f6bc88f08a97c 107 Gene3D G3DSA:2.60.40.180 1 107 7.9E-39 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 IX88_01545 105a43953d23907c2c8f6bc88f08a97c 107 PRINTS PR00189 Transthyretin signature 1 21 4.6E-8 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 IX88_01545 105a43953d23907c2c8f6bc88f08a97c 107 PRINTS PR00189 Transthyretin signature 85 107 4.6E-8 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 IX88_09815 94c43ebf898f0083d155299c554c9b45 113 Pfam PF07238 PilZ domain 11 75 4.0E-6 T 11-10-2018 IPR009875 PilZ domain GO:0035438 IX88_09815 94c43ebf898f0083d155299c554c9b45 113 Gene3D G3DSA:2.40.10.220 2 113 2.2E-33 T 11-10-2018 IX88_06180 6975206fadb3c0ee4c14ba9df4fc0a02 621 SMART SM00493 302 372 2.1E-15 T 11-10-2018 IPR006171 TOPRIM domain IX88_06180 6975206fadb3c0ee4c14ba9df4fc0a02 621 Pfam PF01807 CHC2 zinc finger 4 98 1.1E-38 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 IX88_06180 6975206fadb3c0ee4c14ba9df4fc0a02 621 Gene3D G3DSA:3.40.1360.10 285 408 2.3E-37 T 11-10-2018 IX88_06180 6975206fadb3c0ee4c14ba9df4fc0a02 621 Gene3D G3DSA:3.90.980.10 163 284 1.9E-37 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily IX88_06180 6975206fadb3c0ee4c14ba9df4fc0a02 621 Gene3D G3DSA:3.90.580.10 1 101 2.8E-37 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 IX88_06180 6975206fadb3c0ee4c14ba9df4fc0a02 621 SMART SM00400 34 88 3.3E-30 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 IX88_06180 6975206fadb3c0ee4c14ba9df4fc0a02 621 Pfam PF13662 Toprim domain 306 369 1.2E-15 T 11-10-2018 IPR006171 TOPRIM domain IX88_06180 6975206fadb3c0ee4c14ba9df4fc0a02 621 Pfam PF10410 DnaB-helicase binding domain of primase 411 465 2.5E-5 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 IX88_06180 6975206fadb3c0ee4c14ba9df4fc0a02 621 SUPERFAMILY SSF57783 1 97 5.78E-34 T 11-10-2018 IX88_06180 6975206fadb3c0ee4c14ba9df4fc0a02 621 Pfam PF08275 DNA primase catalytic core, N-terminal domain 174 294 2.1E-37 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal IX88_06180 6975206fadb3c0ee4c14ba9df4fc0a02 621 SUPERFAMILY SSF56731 164 463 1.44E-93 T 11-10-2018 IX88_06180 6975206fadb3c0ee4c14ba9df4fc0a02 621 Hamap MF_00974 DNA primase [dnaG]. 2 613 26.431 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 638 31.346 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 Pfam PF00183 Hsp90 protein 235 637 2.5E-126 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 Gene3D G3DSA:3.30.565.10 1 229 5.7E-78 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 Gene3D G3DSA:3.30.230.80 244 415 9.8E-67 T 11-10-2018 IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 SUPERFAMILY SSF55874 6 217 2.39E-65 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 Gene3D G3DSA:3.40.50.11260 416 503 8.9E-32 T 11-10-2018 IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 Gene3D G3DSA:1.20.120.790 509 639 1.1E-41 T 11-10-2018 IPR037196 HSP90, C-terminal domain IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 SMART SM00387 29 186 9.8E-5 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 PRINTS PR00775 90kDa heat shock protein signature 7 27 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 PRINTS PR00775 90kDa heat shock protein signature 174 191 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 PRINTS PR00775 90kDa heat shock protein signature 192 210 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 PRINTS PR00775 90kDa heat shock protein signature 95 112 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 PRINTS PR00775 90kDa heat shock protein signature 77 94 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 PRINTS PR00775 90kDa heat shock protein signature 122 144 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 PRINTS PR00775 90kDa heat shock protein signature 28 50 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 SUPERFAMILY SSF54211 245 502 1.14E-94 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 PIRSF PIRSF002583 1 639 2.0E-213 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 SUPERFAMILY SSF110942 528 638 1.18E-33 T 11-10-2018 IPR037196 HSP90, C-terminal domain IX88_03785 10923d3cfc22b10c5922178f0f0b99e5 639 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 184 2.4E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 SUPERFAMILY SSF64484 11 1361 0.0 T 11-10-2018 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Pfam PF00562 RNA polymerase Rpb2, domain 6 726 1283 1.8E-159 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1361 12.317 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:3.90.1100.10 657 722 4.1E-21 T 11-10-2018 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:3.90.1110.10 320 450 6.4E-33 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Pfam PF04565 RNA polymerase Rpb2, domain 3 522 589 3.7E-30 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Pfam PF04563 RNA polymerase beta subunit 26 508 1.2E-40 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Pfam PF10385 RNA polymerase beta subunit external 1 domain 600 665 2.0E-22 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 358 463 1.2E-14 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 153 226 1.0E-6 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1358 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:3.90.1100.10 18 159 2.3E-52 T 11-10-2018 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:3.90.1100.10 451 631 8.0E-69 T 11-10-2018 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:2.40.50.150 842 961 6.7E-44 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:3.90.1110.10 160 272 7.8E-29 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:2.40.50.100 723 797 8.0E-32 T 11-10-2018 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:2.40.270.10 799 841 4.9E-6 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:2.40.270.10 1034 1261 5.2E-87 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Pfam PF04560 RNA polymerase Rpb2, domain 7 1285 1359 4.8E-26 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 Gene3D G3DSA:3.90.1800.10 1271 1324 7.8E-11 T 11-10-2018 IX88_03665 1551e40cd15c62fe43865d9e8f819ebc 1362 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1084 1096 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_05285 cf76b40a8328fe52afaa75f0ef3b78b4 496 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 8 490 5.7E-209 T 11-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 IX88_05285 cf76b40a8328fe52afaa75f0ef3b78b4 496 Gene3D G3DSA:3.30.450.90 85 217 5.5E-52 T 11-10-2018 IX88_05285 cf76b40a8328fe52afaa75f0ef3b78b4 496 SUPERFAMILY SSF52540 102 490 1.7E-101 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_05285 cf76b40a8328fe52afaa75f0ef3b78b4 496 Pfam PF00437 Type II/IV secretion system protein 119 384 4.1E-88 T 11-10-2018 IPR001482 Type II/IV secretion system protein IX88_05285 cf76b40a8328fe52afaa75f0ef3b78b4 496 Gene3D G3DSA:3.40.50.300 218 496 3.8E-115 T 11-10-2018 IX88_05285 cf76b40a8328fe52afaa75f0ef3b78b4 496 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 312 326 - T 11-10-2018 IPR001482 Type II/IV secretion system protein IX88_05285 cf76b40a8328fe52afaa75f0ef3b78b4 496 SMART SM00382 245 368 2.1E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_05285 cf76b40a8328fe52afaa75f0ef3b78b4 496 SUPERFAMILY SSF160246 8 70 3.66E-15 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily IX88_05285 cf76b40a8328fe52afaa75f0ef3b78b4 496 Gene3D G3DSA:3.30.300.160 3 84 4.3E-7 T 11-10-2018 IX88_06405 7210389c57fce45c6f3d8576f0fda0d9 150 SUPERFAMILY SSF51283 2 149 3.93E-54 T 11-10-2018 IPR036157 dUTPase-like superfamily IX88_06405 7210389c57fce45c6f3d8576f0fda0d9 150 Gene3D G3DSA:2.70.40.10 1 150 1.7E-54 T 11-10-2018 IPR036157 dUTPase-like superfamily IX88_06405 7210389c57fce45c6f3d8576f0fda0d9 150 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 149 33.565 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 IX88_06405 7210389c57fce45c6f3d8576f0fda0d9 150 TIGRFAM TIGR00576 dut: dUTP diphosphatase 9 149 3.5E-49 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 IX88_06405 7210389c57fce45c6f3d8576f0fda0d9 150 Pfam PF00692 dUTPase 15 148 5.8E-39 T 11-10-2018 IPR029054 dUTPase-like IX88_02885 898954acb2c3f2f86b93ca50b8d4ce92 1216 Gene3D G3DSA:2.50.20.10 974 1216 6.4E-62 T 11-10-2018 IX88_02885 898954acb2c3f2f86b93ca50b8d4ce92 1216 Pfam PF03176 MMPL family 727 948 2.5E-15 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 IX88_02885 898954acb2c3f2f86b93ca50b8d4ce92 1216 Pfam PF03176 MMPL family 253 557 2.9E-24 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 IX88_02885 898954acb2c3f2f86b93ca50b8d4ce92 1216 SUPERFAMILY SSF55961 1 143 8.07E-25 T 11-10-2018 IX88_02885 898954acb2c3f2f86b93ca50b8d4ce92 1216 SUPERFAMILY SSF82866 328 547 3.4E-28 T 11-10-2018 IX88_02885 898954acb2c3f2f86b93ca50b8d4ce92 1216 Pfam PF17131 Outer membrane lipoprotein-sorting protein 1028 1216 1.0E-45 T 11-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein IX88_02885 898954acb2c3f2f86b93ca50b8d4ce92 1216 Gene3D G3DSA:1.20.1640.10 760 949 5.4E-19 T 11-10-2018 IX88_02885 898954acb2c3f2f86b93ca50b8d4ce92 1216 Gene3D G3DSA:1.20.1640.10 368 558 1.0E-8 T 11-10-2018 IX88_02885 898954acb2c3f2f86b93ca50b8d4ce92 1216 SUPERFAMILY SSF82866 724 940 1.7E-32 T 11-10-2018 IX88_02885 898954acb2c3f2f86b93ca50b8d4ce92 1216 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 141 6.6E-14 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase IX88_02885 898954acb2c3f2f86b93ca50b8d4ce92 1216 Gene3D G3DSA:3.30.530.20 1 148 4.2E-22 T 11-10-2018 IPR023393 START-like domain superfamily IX88_18250 cbe0612e51fdae8587e6c9d89631a1a9 125 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_18250 cbe0612e51fdae8587e6c9d89631a1a9 125 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.346 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_18250 cbe0612e51fdae8587e6c9d89631a1a9 125 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 1.5E-45 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_18250 cbe0612e51fdae8587e6c9d89631a1a9 125 Pfam PF01196 Ribosomal protein L17 20 116 2.4E-33 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_18250 cbe0612e51fdae8587e6c9d89631a1a9 125 Gene3D G3DSA:3.90.1030.10 1 117 3.8E-46 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_18250 cbe0612e51fdae8587e6c9d89631a1a9 125 SUPERFAMILY SSF64263 1 119 2.49E-49 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00035 cbe0612e51fdae8587e6c9d89631a1a9 125 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00035 cbe0612e51fdae8587e6c9d89631a1a9 125 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.346 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00035 cbe0612e51fdae8587e6c9d89631a1a9 125 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 1.5E-45 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00035 cbe0612e51fdae8587e6c9d89631a1a9 125 Pfam PF01196 Ribosomal protein L17 20 116 2.4E-33 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00035 cbe0612e51fdae8587e6c9d89631a1a9 125 Gene3D G3DSA:3.90.1030.10 1 117 3.8E-46 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00035 cbe0612e51fdae8587e6c9d89631a1a9 125 SUPERFAMILY SSF64263 1 119 2.49E-49 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_17315 d961fd533cb975592b7f6ffd2828be12 274 SUPERFAMILY SSF81901 32 251 4.36E-25 T 11-10-2018 IX88_17315 d961fd533cb975592b7f6ffd2828be12 274 Pfam PF08238 Sel1 repeat 60 95 1.9E-5 T 11-10-2018 IPR006597 Sel1-like repeat IX88_17315 d961fd533cb975592b7f6ffd2828be12 274 Pfam PF08238 Sel1 repeat 209 241 8.0 T 11-10-2018 IPR006597 Sel1-like repeat IX88_17315 d961fd533cb975592b7f6ffd2828be12 274 Pfam PF08238 Sel1 repeat 97 132 1.5 T 11-10-2018 IPR006597 Sel1-like repeat IX88_17315 d961fd533cb975592b7f6ffd2828be12 274 SMART SM00671 60 95 7.9E-7 T 11-10-2018 IPR006597 Sel1-like repeat IX88_17315 d961fd533cb975592b7f6ffd2828be12 274 SMART SM00671 96 132 7.9E-5 T 11-10-2018 IPR006597 Sel1-like repeat IX88_17315 d961fd533cb975592b7f6ffd2828be12 274 SMART SM00671 207 242 0.063 T 11-10-2018 IPR006597 Sel1-like repeat IX88_17315 d961fd533cb975592b7f6ffd2828be12 274 Gene3D G3DSA:1.25.40.10 25 271 3.1E-35 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_14390 f2aae906a563695df89890c7ae111afa 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 9.8E-34 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_14390 f2aae906a563695df89890c7ae111afa 381 Gene3D G3DSA:1.20.140.10 235 381 2.3E-42 T 11-10-2018 IX88_14390 f2aae906a563695df89890c7ae111afa 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 IX88_14390 f2aae906a563695df89890c7ae111afa 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 8.8E-38 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_14390 f2aae906a563695df89890c7ae111afa 381 PIRSF PIRSF016578 9 381 6.6E-16 T 11-10-2018 IX88_14390 f2aae906a563695df89890c7ae111afa 381 Gene3D G3DSA:1.10.540.10 2 120 6.3E-36 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_14390 f2aae906a563695df89890c7ae111afa 381 SUPERFAMILY SSF47203 228 379 7.09E-46 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_14390 f2aae906a563695df89890c7ae111afa 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 3.6E-24 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_14390 f2aae906a563695df89890c7ae111afa 381 SUPERFAMILY SSF56645 4 241 2.23E-83 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_14390 f2aae906a563695df89890c7ae111afa 381 Gene3D G3DSA:2.40.110.10 121 234 9.6E-41 T 11-10-2018 IX88_14390 f2aae906a563695df89890c7ae111afa 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 IX88_08725 e97d1c4bb94f8753ac559ca6b3ba775f 507 SUPERFAMILY SSF48179 187 291 3.91E-29 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_08725 e97d1c4bb94f8753ac559ca6b3ba775f 507 Gene3D G3DSA:1.10.1040.50 191 495 1.8E-92 T 11-10-2018 IX88_08725 e97d1c4bb94f8753ac559ca6b3ba775f 507 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 186 6.2E-59 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 IX88_08725 e97d1c4bb94f8753ac559ca6b3ba775f 507 Gene3D G3DSA:3.40.50.720 1 190 7.7E-68 T 11-10-2018 IX88_08725 e97d1c4bb94f8753ac559ca6b3ba775f 507 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 415 496 4.8E-16 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 IX88_08725 e97d1c4bb94f8753ac559ca6b3ba775f 507 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 285 7.7E-28 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 IX88_08725 e97d1c4bb94f8753ac559ca6b3ba775f 507 SUPERFAMILY SSF48179 415 496 4.42E-17 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_08725 e97d1c4bb94f8753ac559ca6b3ba775f 507 SUPERFAMILY SSF51735 4 187 2.1E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_08725 e97d1c4bb94f8753ac559ca6b3ba775f 507 Gene3D G3DSA:3.30.750.190 295 412 1.8E-92 T 11-10-2018 IX88_01520 54f2a28c76b846ef85b4099b0178d1c3 255 Pfam PF13557 Putative MetA-pathway of phenol degradation 27 254 7.7E-20 T 11-10-2018 IPR025737 MetA-pathway of phenol degradation, putative IX88_11170 3619b4def95bec88fe454056c2a705e3 525 SUPERFAMILY SSF53720 21 517 3.67E-102 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_11170 3619b4def95bec88fe454056c2a705e3 525 Gene3D G3DSA:3.40.605.10 43 518 3.5E-203 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_11170 3619b4def95bec88fe454056c2a705e3 525 Pfam PF00171 Aldehyde dehydrogenase family 18 457 3.8E-49 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_11170 3619b4def95bec88fe454056c2a705e3 525 Gene3D G3DSA:3.40.309.10 266 453 3.5E-203 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_16930 4ea6ba1343cf798c89bb666a9471e308 549 SUPERFAMILY SSF53649 239 533 2.07E-25 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 IX88_16930 4ea6ba1343cf798c89bb666a9471e308 549 Pfam PF00884 Sulfatase 239 530 8.8E-56 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 IX88_16930 4ea6ba1343cf798c89bb666a9471e308 549 Pfam PF08019 Domain of unknown function (DUF1705) 62 210 5.2E-41 T 11-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 IX88_16930 4ea6ba1343cf798c89bb666a9471e308 549 Gene3D G3DSA:3.40.720.10 217 549 1.8E-92 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 IX88_09235 09e98820e0a53919ec514732713a0ec5 300 Gene3D G3DSA:1.10.10.10 2 91 4.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_09235 09e98820e0a53919ec514732713a0ec5 300 SUPERFAMILY SSF53850 89 298 9.17E-35 T 11-10-2018 IX88_09235 09e98820e0a53919ec514732713a0ec5 300 Gene3D G3DSA:3.40.190.10 92 290 1.9E-58 T 11-10-2018 IX88_09235 09e98820e0a53919ec514732713a0ec5 300 SUPERFAMILY SSF46785 1 81 5.11E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_09235 09e98820e0a53919ec514732713a0ec5 300 Gene3D G3DSA:3.40.190.10 165 271 1.9E-58 T 11-10-2018 IX88_09235 09e98820e0a53919ec514732713a0ec5 300 Pfam PF03466 LysR substrate binding domain 87 294 1.1E-40 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_09235 09e98820e0a53919ec514732713a0ec5 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_09235 09e98820e0a53919ec514732713a0ec5 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_09235 09e98820e0a53919ec514732713a0ec5 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_09235 09e98820e0a53919ec514732713a0ec5 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 2.4E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_03800 ce1735c4dce160d40a279e4930998377 234 Gene3D G3DSA:3.40.30.10 1 207 9.5E-70 T 11-10-2018 IX88_03800 ce1735c4dce160d40a279e4930998377 234 Pfam PF01323 DSBA-like thioredoxin domain 2 203 5.3E-44 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 IX88_03800 ce1735c4dce160d40a279e4930998377 234 SUPERFAMILY SSF52833 1 206 5.14E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_18290 68eee1853237098482299234a0f29593 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 8.9E-18 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain IX88_18290 68eee1853237098482299234a0f29593 58 SUPERFAMILY SSF55129 1 58 1.05E-20 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily IX88_18290 68eee1853237098482299234a0f29593 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 2.6E-20 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_18290 68eee1853237098482299234a0f29593 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.409 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_18290 68eee1853237098482299234a0f29593 58 Gene3D G3DSA:3.30.1390.20 1 58 1.0E-23 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily IX88_18290 68eee1853237098482299234a0f29593 58 PIRSF PIRSF002211 1 58 6.2E-25 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00075 68eee1853237098482299234a0f29593 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 8.9E-18 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain IX88_00075 68eee1853237098482299234a0f29593 58 SUPERFAMILY SSF55129 1 58 1.05E-20 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily IX88_00075 68eee1853237098482299234a0f29593 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 2.6E-20 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00075 68eee1853237098482299234a0f29593 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.409 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00075 68eee1853237098482299234a0f29593 58 Gene3D G3DSA:3.30.1390.20 1 58 1.0E-23 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily IX88_00075 68eee1853237098482299234a0f29593 58 PIRSF PIRSF002211 1 58 6.2E-25 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_03400 beedca493be4df013596bc4a35d0ccc3 473 Gene3D G3DSA:3.40.50.300 132 310 7.2E-59 T 11-10-2018 IX88_03400 beedca493be4df013596bc4a35d0ccc3 473 SMART SM00448 6 117 7.8E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_03400 beedca493be4df013596bc4a35d0ccc3 473 Gene3D G3DSA:3.40.50.2300 1 131 6.6E-30 T 11-10-2018 IX88_03400 beedca493be4df013596bc4a35d0ccc3 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 446 2.8E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 IX88_03400 beedca493be4df013596bc4a35d0ccc3 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 466 2.8E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 IX88_03400 beedca493be4df013596bc4a35d0ccc3 473 SMART SM00382 160 303 1.7E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_03400 beedca493be4df013596bc4a35d0ccc3 473 SUPERFAMILY SSF52540 140 383 8.68E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_03400 beedca493be4df013596bc4a35d0ccc3 473 SUPERFAMILY SSF46689 354 466 1.7E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_03400 beedca493be4df013596bc4a35d0ccc3 473 Pfam PF00158 Sigma-54 interaction domain 141 306 4.2E-65 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 IX88_03400 beedca493be4df013596bc4a35d0ccc3 473 Gene3D G3DSA:1.10.8.60 311 377 2.4E-22 T 11-10-2018 IX88_03400 beedca493be4df013596bc4a35d0ccc3 473 SUPERFAMILY SSF52172 7 185 6.26E-38 T 11-10-2018 IPR011006 CheY-like superfamily IX88_03400 beedca493be4df013596bc4a35d0ccc3 473 Gene3D G3DSA:1.10.10.60 401 468 2.3E-15 T 11-10-2018 IX88_03400 beedca493be4df013596bc4a35d0ccc3 473 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IX88_03400 beedca493be4df013596bc4a35d0ccc3 473 Pfam PF00072 Response regulator receiver domain 8 117 2.7E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_03400 beedca493be4df013596bc4a35d0ccc3 473 Pfam PF02954 Bacterial regulatory protein, Fis family 423 463 4.5E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 IX88_03400 beedca493be4df013596bc4a35d0ccc3 473 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IX88_03400 beedca493be4df013596bc4a35d0ccc3 473 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site IX88_07690 3b82fa95846b0fb43bdf9ed56bb65878 239 Pfam PF07729 FCD domain 106 220 1.5E-6 T 11-10-2018 IPR011711 GntR, C-terminal IX88_07690 3b82fa95846b0fb43bdf9ed56bb65878 239 SMART SM00345 20 81 2.9E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_07690 3b82fa95846b0fb43bdf9ed56bb65878 239 Gene3D G3DSA:1.10.10.10 5 81 2.8E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_07690 3b82fa95846b0fb43bdf9ed56bb65878 239 SMART SM00895 105 226 0.0064 T 11-10-2018 IPR011711 GntR, C-terminal IX88_07690 3b82fa95846b0fb43bdf9ed56bb65878 239 SUPERFAMILY SSF46785 11 85 2.14E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_07690 3b82fa95846b0fb43bdf9ed56bb65878 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 9.5E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_07690 3b82fa95846b0fb43bdf9ed56bb65878 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 9.5E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_07690 3b82fa95846b0fb43bdf9ed56bb65878 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 75 2.5E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_07690 3b82fa95846b0fb43bdf9ed56bb65878 239 SUPERFAMILY SSF48008 103 233 1.41E-6 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_07690 3b82fa95846b0fb43bdf9ed56bb65878 239 Gene3D G3DSA:1.20.120.530 98 231 1.3E-6 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_03335 15e68d6484ef7bc9576127ad1d6776fb 465 PRINTS PR00342 Rhesus blood group protein signature 163 179 5.4E-7 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 IX88_03335 15e68d6484ef7bc9576127ad1d6776fb 465 PRINTS PR00342 Rhesus blood group protein signature 290 312 5.4E-7 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 IX88_03335 15e68d6484ef7bc9576127ad1d6776fb 465 PRINTS PR00342 Rhesus blood group protein signature 345 363 5.4E-7 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 IX88_03335 15e68d6484ef7bc9576127ad1d6776fb 465 PRINTS PR00342 Rhesus blood group protein signature 259 277 5.4E-7 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 IX88_03335 15e68d6484ef7bc9576127ad1d6776fb 465 ProSitePatterns PS01219 Ammonium transporters signature. 220 245 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 IX88_03335 15e68d6484ef7bc9576127ad1d6776fb 465 Pfam PF00909 Ammonium Transporter Family 71 462 5.8E-118 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 IX88_03335 15e68d6484ef7bc9576127ad1d6776fb 465 SUPERFAMILY SSF111352 64 446 1.44E-129 T 11-10-2018 IX88_03335 15e68d6484ef7bc9576127ad1d6776fb 465 Gene3D G3DSA:1.10.3430.10 44 465 3.7E-140 T 11-10-2018 IPR029020 Ammonium/urea transporter IX88_03335 15e68d6484ef7bc9576127ad1d6776fb 465 TIGRFAM TIGR00836 amt: ammonium transporter 68 462 3.8E-133 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 IX88_13000 e98b2af028eb18761e8777be4483ffe1 868 SUPERFAMILY SSF55486 211 455 1.14E-71 T 11-10-2018 IX88_13000 e98b2af028eb18761e8777be4483ffe1 868 Gene3D G3DSA:2.60.40.1840 450 556 1.9E-25 T 11-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily IX88_13000 e98b2af028eb18761e8777be4483ffe1 868 Gene3D G3DSA:1.25.50.10 557 867 1.4E-72 T 11-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily IX88_13000 e98b2af028eb18761e8777be4483ffe1 868 Gene3D G3DSA:1.10.390.10 286 449 6.6E-59 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily IX88_13000 e98b2af028eb18761e8777be4483ffe1 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 559 866 3.6E-72 T 11-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal IX88_13000 e98b2af028eb18761e8777be4483ffe1 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 450 555 1.4E-23 T 11-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold IX88_13000 e98b2af028eb18761e8777be4483ffe1 868 SUPERFAMILY SSF63737 12 199 2.22E-39 T 11-10-2018 IX88_13000 e98b2af028eb18761e8777be4483ffe1 868 Pfam PF01433 Peptidase family M1 domain 214 443 3.7E-54 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 IX88_13000 e98b2af028eb18761e8777be4483ffe1 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 6.1E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 IX88_13000 e98b2af028eb18761e8777be4483ffe1 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 264 274 6.1E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 IX88_13000 e98b2af028eb18761e8777be4483ffe1 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 6.1E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 IX88_13000 e98b2af028eb18761e8777be4483ffe1 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 6.1E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 IX88_13000 e98b2af028eb18761e8777be4483ffe1 868 Gene3D G3DSA:1.10.1740.60 201 285 2.0E-38 T 11-10-2018 IX88_13000 e98b2af028eb18761e8777be4483ffe1 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 19 865 1.0E-302 T 11-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 IX88_13000 e98b2af028eb18761e8777be4483ffe1 868 Gene3D G3DSA:2.60.40.1730 22 200 1.2E-66 T 11-10-2018 IX88_14310 25705dad3a535cb30f8cc394fc0ad31a 383 Pfam PF00271 Helicase conserved C-terminal domain 237 346 1.1E-29 T 11-10-2018 IPR001650 Helicase, C-terminal IX88_14310 25705dad3a535cb30f8cc394fc0ad31a 383 SMART SM00490 265 346 1.3E-29 T 11-10-2018 IPR001650 Helicase, C-terminal IX88_14310 25705dad3a535cb30f8cc394fc0ad31a 383 SMART SM00487 22 229 3.9E-56 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain IX88_14310 25705dad3a535cb30f8cc394fc0ad31a 383 Pfam PF00270 DEAD/DEAH box helicase 27 200 1.5E-47 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 IX88_14310 25705dad3a535cb30f8cc394fc0ad31a 383 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 2 382 49.673 T 11-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 IX88_14310 25705dad3a535cb30f8cc394fc0ad31a 383 SUPERFAMILY SSF52540 78 365 5.82E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_14310 25705dad3a535cb30f8cc394fc0ad31a 383 Gene3D G3DSA:3.40.50.300 1 217 1.0E-73 T 11-10-2018 IX88_14310 25705dad3a535cb30f8cc394fc0ad31a 383 Gene3D G3DSA:3.40.50.300 220 377 9.3E-51 T 11-10-2018 IX88_14310 25705dad3a535cb30f8cc394fc0ad31a 383 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site IX88_00110 c95f575e30547f3d14d843a18a08609e 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 100 2.0E-21 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00110 c95f575e30547f3d14d843a18a08609e 105 Pfam PF00467 KOW motif 6 34 4.4E-7 T 11-10-2018 IPR005824 KOW IX88_00110 c95f575e30547f3d14d843a18a08609e 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00110 c95f575e30547f3d14d843a18a08609e 105 SUPERFAMILY SSF50104 3 99 6.39E-30 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily IX88_00110 c95f575e30547f3d14d843a18a08609e 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 95 19.332 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00110 c95f575e30547f3d14d843a18a08609e 105 SMART SM00739 3 30 1.7E-6 T 11-10-2018 IPR005824 KOW IX88_00110 c95f575e30547f3d14d843a18a08609e 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 101 1.2E-33 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00110 c95f575e30547f3d14d843a18a08609e 105 Gene3D G3DSA:2.30.30.30 1 102 2.9E-34 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 IX88_10450 e93cb504a5fd649e32f848b544c7bc7b 328 Gene3D G3DSA:3.20.20.70 46 283 1.2E-18 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_10450 e93cb504a5fd649e32f848b544c7bc7b 328 SMART SM00729 81 286 2.6E-16 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 IX88_10450 e93cb504a5fd649e32f848b544c7bc7b 328 SUPERFAMILY SSF102114 49 312 2.35E-58 T 11-10-2018 IX88_10450 e93cb504a5fd649e32f848b544c7bc7b 328 TIGRFAM TIGR00510 lipA: lipoyl synthase 29 310 1.2E-120 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 IX88_10450 e93cb504a5fd649e32f848b544c7bc7b 328 PIRSF PIRSF005963 6 323 6.5E-126 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 IX88_10450 e93cb504a5fd649e32f848b544c7bc7b 328 Hamap MF_00206 Lipoyl synthase [lipA]. 1 320 141.613 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 IX88_10450 e93cb504a5fd649e32f848b544c7bc7b 328 Pfam PF04055 Radical SAM superfamily 88 248 1.8E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 IX88_02730 3d4bebd3fee9bf46990438d9ee12233a 169 Gene3D G3DSA:3.40.630.30 8 148 1.0E-18 T 11-10-2018 IX88_02730 3d4bebd3fee9bf46990438d9ee12233a 169 SUPERFAMILY SSF55729 4 150 2.93E-14 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_02730 3d4bebd3fee9bf46990438d9ee12233a 169 Pfam PF00583 Acetyltransferase (GNAT) family 56 141 7.6E-8 T 11-10-2018 IPR000182 GNAT domain IX88_08510 5cefa380722d952f307d47068632352d 268 SUPERFAMILY SSF160920 15 261 3.01E-109 T 11-10-2018 IPR038021 Putative hydro-lyase IX88_08510 5cefa380722d952f307d47068632352d 268 Gene3D G3DSA:3.40.1640.10 23 256 3.4E-92 T 11-10-2018 IX88_08510 5cefa380722d952f307d47068632352d 268 Hamap MF_01830 Putative hydro-lyase . 14 268 51.28 T 11-10-2018 IPR016938 Uncharacterised protein family UPF0317 IX88_08510 5cefa380722d952f307d47068632352d 268 Gene3D G3DSA:3.30.2040.10 128 240 3.4E-92 T 11-10-2018 IX88_08510 5cefa380722d952f307d47068632352d 268 PIRSF PIRSF029755 3 268 3.6E-117 T 11-10-2018 IPR016938 Uncharacterised protein family UPF0317 IX88_08510 5cefa380722d952f307d47068632352d 268 Pfam PF07286 Protein of unknown function (DUF1445) 118 260 1.6E-68 T 11-10-2018 IPR009906 D-glutamate cyclase IX88_06355 53ce17ccfb6f9f4d5b4fa920d2920b15 1010 Gene3D G3DSA:3.30.980.40 521 626 3.1E-32 T 11-10-2018 IX88_06355 53ce17ccfb6f9f4d5b4fa920d2920b15 1010 SMART SM00843 948 1010 8.4E-33 T 11-10-2018 IPR018541 FtsK gamma domain IX88_06355 53ce17ccfb6f9f4d5b4fa920d2920b15 1010 SUPERFAMILY SSF46785 948 1010 2.61E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_06355 53ce17ccfb6f9f4d5b4fa920d2920b15 1010 Gene3D G3DSA:1.10.10.10 942 1009 4.2E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_06355 53ce17ccfb6f9f4d5b4fa920d2920b15 1010 SUPERFAMILY SSF52540 604 917 1.73E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_06355 53ce17ccfb6f9f4d5b4fa920d2920b15 1010 Gene3D G3DSA:3.40.50.300 627 930 5.6E-113 T 11-10-2018 IX88_06355 53ce17ccfb6f9f4d5b4fa920d2920b15 1010 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 13 172 7.4E-30 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region IX88_06355 53ce17ccfb6f9f4d5b4fa920d2920b15 1010 Pfam PF09397 Ftsk gamma domain 950 1010 1.4E-26 T 11-10-2018 IPR018541 FtsK gamma domain IX88_06355 53ce17ccfb6f9f4d5b4fa920d2920b15 1010 Pfam PF01580 FtsK/SpoIIIE family 630 844 1.4E-63 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 IX88_03745 8115b825f35265510df96bb27800eff5 100 Gene3D G3DSA:3.40.120.10 2 83 7.6E-24 T 11-10-2018 IX88_03745 8115b825f35265510df96bb27800eff5 100 SUPERFAMILY SSF53738 2 81 5.1E-22 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_03745 8115b825f35265510df96bb27800eff5 100 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 81 1.1E-22 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_11840 7aba176552fe2ebe659e2517455287de 368 Gene3D G3DSA:3.40.50.300 162 353 7.6E-116 T 11-10-2018 IX88_11840 7aba176552fe2ebe659e2517455287de 368 SMART SM00382 163 343 5.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_11840 7aba176552fe2ebe659e2517455287de 368 SMART SM00962 164 365 5.5E-123 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IX88_11840 7aba176552fe2ebe659e2517455287de 368 Pfam PF00448 SRP54-type protein, GTPase domain 165 364 1.2E-77 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IX88_11840 7aba176552fe2ebe659e2517455287de 368 Gene3D G3DSA:1.20.120.140 65 363 7.6E-116 T 11-10-2018 IX88_11840 7aba176552fe2ebe659e2517455287de 368 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 93 364 1.5E-107 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 IX88_11840 7aba176552fe2ebe659e2517455287de 368 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 92 365 60.139 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 IX88_11840 7aba176552fe2ebe659e2517455287de 368 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 338 351 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IX88_11840 7aba176552fe2ebe659e2517455287de 368 SMART SM00963 68 149 1.2E-24 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IX88_11840 7aba176552fe2ebe659e2517455287de 368 Pfam PF02881 SRP54-type protein, helical bundle domain 83 145 7.2E-11 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IX88_11840 7aba176552fe2ebe659e2517455287de 368 SUPERFAMILY SSF47364 63 143 9.68E-20 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 IX88_11840 7aba176552fe2ebe659e2517455287de 368 SUPERFAMILY SSF52540 162 365 9.15E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_11405 2135e428889a25cb5dafe499c9f4c6f0 96 SUPERFAMILY SSF54909 1 95 1.02E-39 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel IX88_11405 2135e428889a25cb5dafe499c9f4c6f0 96 Gene3D G3DSA:3.30.70.1060 1 94 1.0E-36 T 11-10-2018 IX88_11405 2135e428889a25cb5dafe499c9f4c6f0 96 Pfam PF02426 Muconolactone delta-isomerase 1 90 9.4E-42 T 11-10-2018 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 IX88_11405 2135e428889a25cb5dafe499c9f4c6f0 96 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 2.3E-49 T 11-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 IX88_11405 2135e428889a25cb5dafe499c9f4c6f0 96 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 2.0E-27 T 11-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 IX88_11405 2135e428889a25cb5dafe499c9f4c6f0 96 PIRSF PIRSF001486 1 94 8.6E-50 T 11-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 IX88_09495 275a03471fb8776e75c0cee1795da11a 145 Pfam PF05232 Chlorhexidine efflux transporter 3 65 2.9E-19 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter IX88_09495 275a03471fb8776e75c0cee1795da11a 145 Pfam PF05232 Chlorhexidine efflux transporter 71 133 4.1E-23 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter IX88_12205 2f2cb408d2b3b97d7368d76482ed931b 411 SUPERFAMILY SSF53218 182 332 1.57E-33 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily IX88_12205 2f2cb408d2b3b97d7368d76482ed931b 411 Gene3D G3DSA:3.90.105.10 33 179 4.2E-101 T 11-10-2018 IX88_12205 2f2cb408d2b3b97d7368d76482ed931b 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 12 172 1.8E-27 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 IX88_12205 2f2cb408d2b3b97d7368d76482ed931b 411 Pfam PF03454 MoeA C-terminal region (domain IV) 341 403 7.4E-11 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 IX88_12205 2f2cb408d2b3b97d7368d76482ed931b 411 SMART SM00852 185 328 1.4E-28 T 11-10-2018 IPR001453 MoaB/Mog domain IX88_12205 2f2cb408d2b3b97d7368d76482ed931b 411 Pfam PF00994 Probable molybdopterin binding domain 185 323 2.4E-26 T 11-10-2018 IPR001453 MoaB/Mog domain IX88_12205 2f2cb408d2b3b97d7368d76482ed931b 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 182 321 5.8E-26 T 11-10-2018 IPR001453 MoaB/Mog domain IX88_12205 2f2cb408d2b3b97d7368d76482ed931b 411 Gene3D G3DSA:3.40.980.10 180 336 4.2E-101 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily IX88_12205 2f2cb408d2b3b97d7368d76482ed931b 411 Gene3D G3DSA:2.40.340.10 337 401 4.2E-101 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 IX88_12205 2f2cb408d2b3b97d7368d76482ed931b 411 Gene3D G3DSA:2.170.190.11 53 146 4.2E-101 T 11-10-2018 IX88_12205 2f2cb408d2b3b97d7368d76482ed931b 411 SUPERFAMILY SSF63867 337 405 7.19E-11 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 IX88_12205 2f2cb408d2b3b97d7368d76482ed931b 411 SUPERFAMILY SSF63882 9 180 3.01E-38 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 IX88_01565 54abf1c37f0449e7f53531cd94790043 336 SUPERFAMILY SSF49785 17 172 1.16E-58 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily IX88_01565 54abf1c37f0449e7f53531cd94790043 336 PIRSF PIRSF016516 2 335 8.0E-148 T 11-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 IX88_01565 54abf1c37f0449e7f53531cd94790043 336 SUPERFAMILY SSF49785 174 333 3.12E-55 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily IX88_01565 54abf1c37f0449e7f53531cd94790043 336 Pfam PF03561 Allantoicase repeat 191 331 3.7E-47 T 11-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 IX88_01565 54abf1c37f0449e7f53531cd94790043 336 Pfam PF03561 Allantoicase repeat 27 170 6.2E-48 T 11-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 IX88_01565 54abf1c37f0449e7f53531cd94790043 336 Gene3D G3DSA:2.60.120.260 173 335 1.1E-56 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily IX88_01565 54abf1c37f0449e7f53531cd94790043 336 Gene3D G3DSA:2.60.120.260 9 172 2.1E-59 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily IX88_01565 54abf1c37f0449e7f53531cd94790043 336 Hamap MF_00813 Probable allantoicase [alc]. 1 334 46.599 T 11-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 IX88_01565 54abf1c37f0449e7f53531cd94790043 336 TIGRFAM TIGR02961 allantoicase: allantoicase 19 332 6.7E-143 T 11-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 IX88_10840 7a60324a43aaaab148ab7e758b6bb3a7 852 Pfam PF13954 PapC N-terminal domain 47 192 8.2E-44 T 11-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 IX88_10840 7a60324a43aaaab148ab7e758b6bb3a7 852 Pfam PF00577 Outer membrane usher protein 213 761 2.6E-160 T 11-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 IX88_10840 7a60324a43aaaab148ab7e758b6bb3a7 852 Gene3D G3DSA:2.60.40.2070 769 852 1.0E-17 T 11-10-2018 IX88_10840 7a60324a43aaaab148ab7e758b6bb3a7 852 Gene3D G3DSA:3.10.20.410 45 170 1.1E-33 T 11-10-2018 IX88_10840 7a60324a43aaaab148ab7e758b6bb3a7 852 Gene3D G3DSA:2.60.40.2610 676 766 8.1E-30 T 11-10-2018 IX88_10840 7a60324a43aaaab148ab7e758b6bb3a7 852 Pfam PF13953 PapC C-terminal domain 771 834 1.6E-19 T 11-10-2018 IPR025949 PapC-like, C-terminal domain IX88_10840 7a60324a43aaaab148ab7e758b6bb3a7 852 SUPERFAMILY SSF141729 68 184 3.01E-33 T 11-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 IX88_10840 7a60324a43aaaab148ab7e758b6bb3a7 852 Gene3D G3DSA:2.60.40.3110 285 374 5.0E-36 T 11-10-2018 IX88_16490 67df142d326a907ae1957efa41ff4de7 252 SUPERFAMILY SSF56300 2 232 1.25E-36 T 11-10-2018 IX88_16490 67df142d326a907ae1957efa41ff4de7 252 Pfam PF00149 Calcineurin-like phosphoesterase 2 189 8.1E-13 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 IX88_16490 67df142d326a907ae1957efa41ff4de7 252 Gene3D G3DSA:3.60.21.10 1 246 6.6E-27 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like IX88_09205 1ce6b6435101bc1fba90695d803ede73 228 SUPERFAMILY SSF52499 6 207 6.15E-44 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 IX88_09205 1ce6b6435101bc1fba90695d803ede73 228 Pfam PF00857 Isochorismatase family 16 168 2.0E-27 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 IX88_09205 1ce6b6435101bc1fba90695d803ede73 228 Gene3D G3DSA:3.40.50.850 4 207 6.0E-46 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 IX88_09610 8d0bd16a5a7e1c4194e0ed518bc298db 662 Gene3D G3DSA:3.40.50.970 6 328 5.1E-132 T 11-10-2018 IX88_09610 8d0bd16a5a7e1c4194e0ed518bc298db 662 ProSitePatterns PS00802 Transketolase signature 2. 469 485 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 IX88_09610 8d0bd16a5a7e1c4194e0ed518bc298db 662 TIGRFAM TIGR00232 tktlase_bact: transketolase 10 661 2.0E-296 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 IX88_09610 8d0bd16a5a7e1c4194e0ed518bc298db 662 SUPERFAMILY SSF52922 534 661 6.71E-37 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 IX88_09610 8d0bd16a5a7e1c4194e0ed518bc298db 662 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 IX88_09610 8d0bd16a5a7e1c4194e0ed518bc298db 662 SMART SM00861 357 527 2.2E-71 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain IX88_09610 8d0bd16a5a7e1c4194e0ed518bc298db 662 Pfam PF02780 Transketolase, C-terminal domain 551 653 2.9E-10 T 11-10-2018 IPR033248 Transketolase, C-terminal domain IX88_09610 8d0bd16a5a7e1c4194e0ed518bc298db 662 SUPERFAMILY SSF52518 338 527 8.34E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_09610 8d0bd16a5a7e1c4194e0ed518bc298db 662 Pfam PF02779 Transketolase, pyrimidine binding domain 356 526 6.0E-47 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain IX88_09610 8d0bd16a5a7e1c4194e0ed518bc298db 662 Gene3D G3DSA:3.40.50.970 329 539 8.9E-86 T 11-10-2018 IX88_09610 8d0bd16a5a7e1c4194e0ed518bc298db 662 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 336 3.6E-164 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 IX88_09610 8d0bd16a5a7e1c4194e0ed518bc298db 662 Gene3D G3DSA:3.40.50.920 540 661 2.8E-36 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 IX88_09610 8d0bd16a5a7e1c4194e0ed518bc298db 662 SUPERFAMILY SSF52518 7 322 4.49E-120 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_15475 1134c83a64da0ee6b881102b963c519f 210 SUPERFAMILY SSF46689 13 90 9.75E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_15475 1134c83a64da0ee6b881102b963c519f 210 SUPERFAMILY SSF48498 91 205 9.34E-31 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_15475 1134c83a64da0ee6b881102b963c519f 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 35 66 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site IX88_15475 1134c83a64da0ee6b881102b963c519f 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 1.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_15475 1134c83a64da0ee6b881102b963c519f 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 4.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_15475 1134c83a64da0ee6b881102b963c519f 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 4.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_15475 1134c83a64da0ee6b881102b963c519f 210 Gene3D G3DSA:1.10.357.10 14 206 3.1E-45 T 11-10-2018 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 SUPERFAMILY SSF56672 524 923 1.22E-148 T 11-10-2018 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 SUPERFAMILY SSF53098 332 517 1.48E-54 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 259 1.3E-30 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 SUPERFAMILY SSF88723 1 165 1.99E-53 T 11-10-2018 IPR029060 PIN-like domain superfamily IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 Gene3D G3DSA:3.30.70.370 661 919 2.5E-109 T 11-10-2018 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 SMART SM00475 1 256 2.5E-121 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 TIGRFAM TIGR00593 pola: DNA polymerase I 5 923 1.1E-293 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 Gene3D G3DSA:1.10.150.20 706 849 2.5E-109 T 11-10-2018 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 Gene3D G3DSA:3.30.420.10 326 540 2.9E-69 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 SMART SM00474 329 516 1.7E-35 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 SMART SM00279 168 203 7.0E-13 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 SMART SM00482 683 887 7.8E-102 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 Gene3D G3DSA:1.10.150.20 169 241 8.1E-95 T 11-10-2018 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 Pfam PF00476 DNA polymerase family A 551 921 1.4E-151 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 165 1.0E-50 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 Gene3D G3DSA:3.40.50.1010 5 272 8.1E-95 T 11-10-2018 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 Gene3D G3DSA:1.20.1060.10 542 655 1.4E-38 T 11-10-2018 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 842 858 3.5E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 727 740 3.5E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 652 674 3.5E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 675 690 3.5E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 697 720 3.5E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 810 821 3.5E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 870 883 3.5E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 788 799 3.5E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 751 776 3.5E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 SUPERFAMILY SSF47807 166 280 6.28E-34 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 ProSitePatterns PS00447 DNA polymerase family A signature. 751 770 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_05265 c3e7d6475963517655f972b2c2e85f24 923 Pfam PF01612 3'-5' exonuclease 329 515 5.2E-37 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 IX88_10070 38ccff9fed00891e823f620f837052f6 128 SUPERFAMILY SSF82649 1 125 3.92E-49 T 11-10-2018 IX88_10070 38ccff9fed00891e823f620f837052f6 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.1E-68 T 11-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 IX88_10070 38ccff9fed00891e823f620f837052f6 128 Gene3D G3DSA:3.90.1010.10 1 128 3.0E-58 T 11-10-2018 IX88_10070 38ccff9fed00891e823f620f837052f6 128 Pfam PF01592 NifU-like N terminal domain 2 127 1.2E-56 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 IX88_00720 ecad702439ad84997bef661ea8f6de90 175 Pfam PF04351 Pilus assembly protein, PilP 27 170 3.8E-43 T 11-10-2018 IPR007446 Pilus assembly protein PilP IX88_00720 ecad702439ad84997bef661ea8f6de90 175 PIRSF PIRSF016481 1 172 9.7E-37 T 11-10-2018 IPR007446 Pilus assembly protein PilP IX88_00720 ecad702439ad84997bef661ea8f6de90 175 Gene3D G3DSA:2.30.30.830 77 171 3.4E-29 T 11-10-2018 IX88_17660 b6d0a47451174649fe66e924e39977a9 281 SUPERFAMILY SSF53448 3 232 4.08E-55 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_17660 b6d0a47451174649fe66e924e39977a9 281 Pfam PF00535 Glycosyl transferase family 2 6 136 3.3E-28 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 IX88_17660 b6d0a47451174649fe66e924e39977a9 281 Gene3D G3DSA:3.90.550.10 1 256 1.1E-60 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_11355 3b884b4dbf11cd954e61b6374675a778 276 Gene3D G3DSA:3.40.50.1820 1 275 6.2E-91 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_11355 3b884b4dbf11cd954e61b6374675a778 276 SUPERFAMILY SSF53474 1 276 2.38E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_11355 3b884b4dbf11cd954e61b6374675a778 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 6.5E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_11355 3b884b4dbf11cd954e61b6374675a778 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 233 6.5E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_11355 3b884b4dbf11cd954e61b6374675a778 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 6.5E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_11355 3b884b4dbf11cd954e61b6374675a778 276 Pfam PF00561 alpha/beta hydrolase fold 24 256 4.9E-26 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_13890 6e990a1317381a621deb7923cf22cb29 336 Pfam PF00814 Glycoprotease family 25 305 1.7E-102 T 11-10-2018 IPR000905 Gcp-like domain IX88_13890 6e990a1317381a621deb7923cf22cb29 336 Gene3D G3DSA:3.30.420.40 3 313 8.2E-127 T 11-10-2018 IX88_13890 6e990a1317381a621deb7923cf22cb29 336 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 304 2.2E-118 T 11-10-2018 IPR017861 Kae1/TsaD family IX88_13890 6e990a1317381a621deb7923cf22cb29 336 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 329 64.139 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 IX88_13890 6e990a1317381a621deb7923cf22cb29 336 SUPERFAMILY SSF53067 3 121 7.12E-30 T 11-10-2018 IX88_13890 6e990a1317381a621deb7923cf22cb29 336 SUPERFAMILY SSF53067 101 307 3.88E-44 T 11-10-2018 IX88_13890 6e990a1317381a621deb7923cf22cb29 336 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 312 3.0E-133 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 IX88_13890 6e990a1317381a621deb7923cf22cb29 336 Gene3D G3DSA:3.30.420.40 129 291 8.2E-127 T 11-10-2018 IX88_13890 6e990a1317381a621deb7923cf22cb29 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 261 270 3.6E-49 T 11-10-2018 IPR017861 Kae1/TsaD family IX88_13890 6e990a1317381a621deb7923cf22cb29 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 3.6E-49 T 11-10-2018 IPR017861 Kae1/TsaD family IX88_13890 6e990a1317381a621deb7923cf22cb29 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 3.6E-49 T 11-10-2018 IPR017861 Kae1/TsaD family IX88_13890 6e990a1317381a621deb7923cf22cb29 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 3.6E-49 T 11-10-2018 IPR017861 Kae1/TsaD family IX88_13890 6e990a1317381a621deb7923cf22cb29 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 3.6E-49 T 11-10-2018 IPR017861 Kae1/TsaD family IX88_13890 6e990a1317381a621deb7923cf22cb29 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 3.6E-49 T 11-10-2018 IPR017861 Kae1/TsaD family IX88_13890 6e990a1317381a621deb7923cf22cb29 336 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 11-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 IX88_12605 57bebb8b39da6a146e87a5a7bf67991c 256 Pfam PF01695 IstB-like ATP binding protein 83 221 3.1E-23 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 IX88_12605 57bebb8b39da6a146e87a5a7bf67991c 256 Gene3D G3DSA:3.40.50.300 58 237 5.3E-39 T 11-10-2018 IX88_12605 57bebb8b39da6a146e87a5a7bf67991c 256 SMART SM00382 105 240 4.3E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_12605 57bebb8b39da6a146e87a5a7bf67991c 256 SUPERFAMILY SSF52540 75 234 4.36E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_00150 57f2d18e33b7ed34567dc80eda5727d0 274 PIRSF PIRSF002158 10 274 4.1E-101 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00150 57f2d18e33b7ed34567dc80eda5727d0 274 Gene3D G3DSA:2.30.30.30 115 195 9.8E-31 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 IX88_00150 57f2d18e33b7ed34567dc80eda5727d0 274 SUPERFAMILY SSF50249 3 124 3.32E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_00150 57f2d18e33b7ed34567dc80eda5727d0 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 9.3E-34 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00150 57f2d18e33b7ed34567dc80eda5727d0 274 Gene3D G3DSA:2.40.50.140 1 114 7.3E-49 T 11-10-2018 IX88_00150 57f2d18e33b7ed34567dc80eda5727d0 274 Gene3D G3DSA:4.10.950.10 196 273 2.0E-33 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00150 57f2d18e33b7ed34567dc80eda5727d0 274 SMART SM01382 124 251 3.1E-84 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 IX88_00150 57f2d18e33b7ed34567dc80eda5727d0 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 7.3E-125 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 IX88_00150 57f2d18e33b7ed34567dc80eda5727d0 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 45.552 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 IX88_00150 57f2d18e33b7ed34567dc80eda5727d0 274 SMART SM01383 42 118 3.9E-46 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00150 57f2d18e33b7ed34567dc80eda5727d0 274 SUPERFAMILY SSF50104 126 269 1.87E-56 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily IX88_00150 57f2d18e33b7ed34567dc80eda5727d0 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 249 4.4E-53 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 IX88_07900 fcd92c2d8fb318a9ef56c1d30b28d2e4 320 PIRSF PIRSF007580 20 303 1.3E-50 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_07900 fcd92c2d8fb318a9ef56c1d30b28d2e4 320 Pfam PF10118 Predicted metal-dependent hydrolase 33 285 1.1E-63 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_08405 050d3d4c0532bed08a95b5774503c985 401 SUPERFAMILY SSF141868 148 393 3.4E-81 T 11-10-2018 IPR035919 EAL domain superfamily IX88_08405 050d3d4c0532bed08a95b5774503c985 401 Gene3D G3DSA:3.20.20.450 145 399 4.5E-88 T 11-10-2018 IPR035919 EAL domain superfamily IX88_08405 050d3d4c0532bed08a95b5774503c985 401 Pfam PF00563 EAL domain 150 383 4.4E-67 T 11-10-2018 IPR001633 EAL domain IX88_08405 050d3d4c0532bed08a95b5774503c985 401 SMART SM00052 143 389 2.1E-95 T 11-10-2018 IPR001633 EAL domain IX88_05615 a617f76f5da53982c54e4242a8114fd6 309 Pfam PF03466 LysR substrate binding domain 85 289 6.8E-22 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_05615 a617f76f5da53982c54e4242a8114fd6 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.0E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_05615 a617f76f5da53982c54e4242a8114fd6 309 SUPERFAMILY SSF46785 1 107 1.02E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_05615 a617f76f5da53982c54e4242a8114fd6 309 Gene3D G3DSA:3.40.190.290 91 299 4.8E-25 T 11-10-2018 IX88_05615 a617f76f5da53982c54e4242a8114fd6 309 Gene3D G3DSA:1.10.10.10 1 90 1.3E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_05615 a617f76f5da53982c54e4242a8114fd6 309 SUPERFAMILY SSF53850 87 298 9.05E-26 T 11-10-2018 IX88_02675 808410a500626333e4cfb253a24d0723 568 Pfam PF01565 FAD binding domain 45 163 3.5E-7 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 IX88_02675 808410a500626333e4cfb253a24d0723 568 Pfam PF09330 D-lactate dehydrogenase, membrane binding 275 563 5.3E-134 T 11-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 IX88_02675 808410a500626333e4cfb253a24d0723 568 Gene3D G3DSA:3.30.70.610 359 430 3.5E-18 T 11-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 IX88_02675 808410a500626333e4cfb253a24d0723 568 Gene3D G3DSA:3.30.70.610 267 344 5.0E-14 T 11-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 IX88_02675 808410a500626333e4cfb253a24d0723 568 Gene3D G3DSA:3.30.465.10 103 266 1.5E-74 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 IX88_02675 808410a500626333e4cfb253a24d0723 568 Gene3D G3DSA:3.30.1370.20 431 515 3.0E-39 T 11-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 IX88_02675 808410a500626333e4cfb253a24d0723 568 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 7 564 56.925 T 11-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 IX88_02675 808410a500626333e4cfb253a24d0723 568 SUPERFAMILY SSF56176 7 269 4.35E-69 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 IX88_02675 808410a500626333e4cfb253a24d0723 568 PIRSF PIRSF000101 1 565 8.3E-270 T 11-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 IX88_02675 808410a500626333e4cfb253a24d0723 568 Gene3D G3DSA:3.30.43.10 2 100 5.6E-12 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 IX88_02675 808410a500626333e4cfb253a24d0723 568 SUPERFAMILY SSF55103 274 563 1.63E-105 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 IX88_12740 b670a5808111d176001f235a13474c15 167 SMART SM00226 5 160 1.3E-41 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I IX88_12740 b670a5808111d176001f235a13474c15 167 Gene3D G3DSA:3.40.50.2300 5 166 4.1E-51 T 11-10-2018 IX88_12740 b670a5808111d176001f235a13474c15 167 SUPERFAMILY SSF52788 3 161 2.62E-47 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily IX88_12740 b670a5808111d176001f235a13474c15 167 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 157 6.0E-36 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I IX88_12740 b670a5808111d176001f235a13474c15 167 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 132 147 2.5E-16 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 IX88_12740 b670a5808111d176001f235a13474c15 167 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 126 2.5E-16 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 IX88_12740 b670a5808111d176001f235a13474c15 167 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 7 24 2.5E-16 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 IX88_08675 6651d264801b1bf24267260d88fa910a 271 SUPERFAMILY SSF56784 8 261 1.09E-51 T 11-10-2018 IPR036412 HAD-like superfamily IX88_08675 6651d264801b1bf24267260d88fa910a 271 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 271 120.714 T 11-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 IX88_08675 6651d264801b1bf24267260d88fa910a 271 Gene3D G3DSA:3.40.50.1000 10 271 2.0E-107 T 11-10-2018 IPR023214 HAD superfamily IX88_08675 6651d264801b1bf24267260d88fa910a 271 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 76 205 4.1E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IX88_08675 6651d264801b1bf24267260d88fa910a 271 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 7 259 1.7E-103 T 11-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 IX88_08675 6651d264801b1bf24267260d88fa910a 271 Gene3D G3DSA:1.10.150.240 26 103 2.0E-107 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IX88_08675 6651d264801b1bf24267260d88fa910a 271 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 205 3.0E-7 T 11-10-2018 IX88_02555 c1bc7bc3488a442b803129b92c343735 189 SUPERFAMILY SSF55846 10 185 3.53E-63 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 IX88_02555 c1bc7bc3488a442b803129b92c343735 189 SMART SM00644 22 172 2.6E-41 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 IX88_02555 c1bc7bc3488a442b803129b92c343735 189 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 32 173 5.9E-26 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 IX88_02555 c1bc7bc3488a442b803129b92c343735 189 Gene3D G3DSA:3.40.80.10 9 189 2.5E-57 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 IX88_13595 8e5bc3b1c60785256a8b4694dd894968 263 Pfam PF07103 Protein of unknown function (DUF1365) 11 256 4.5E-51 T 11-10-2018 IPR010775 Protein of unknown function DUF1365 IX88_01530 c07fb1e365f772d1ca05128539667671 116 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 7 101 7.8E-8 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 IX88_01530 c07fb1e365f772d1ca05128539667671 116 SUPERFAMILY SSF69754 1 95 1.44E-10 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like IX88_01530 c07fb1e365f772d1ca05128539667671 116 Gene3D G3DSA:3.30.160.100 1 103 3.0E-6 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like IX88_04660 50ce1d2a376e08d8384667db6b021840 386 SUPERFAMILY SSF53474 11 373 3.06E-99 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_04660 50ce1d2a376e08d8384667db6b021840 386 Gene3D G3DSA:1.10.1740.110 186 291 2.5E-139 T 11-10-2018 IX88_04660 50ce1d2a376e08d8384667db6b021840 386 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 8 373 28.98 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 IX88_04660 50ce1d2a376e08d8384667db6b021840 386 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 19 372 2.7E-139 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 IX88_04660 50ce1d2a376e08d8384667db6b021840 386 PIRSF PIRSF000443 2 381 5.0E-132 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 IX88_04660 50ce1d2a376e08d8384667db6b021840 386 Pfam PF00561 alpha/beta hydrolase fold 49 358 4.4E-31 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_04660 50ce1d2a376e08d8384667db6b021840 386 Gene3D G3DSA:3.40.50.1820 24 359 2.5E-139 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_00135 c33405a233cdbb3fa95feff001038950 250 SUPERFAMILY SSF54821 108 206 1.57E-40 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00135 c33405a233cdbb3fa95feff001038950 250 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 3.4E-95 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 IX88_00135 c33405a233cdbb3fa95feff001038950 250 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.0E-41 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00135 c33405a233cdbb3fa95feff001038950 250 Gene3D G3DSA:3.30.300.20 18 107 2.6E-26 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta IX88_00135 c33405a233cdbb3fa95feff001038950 250 SUPERFAMILY SSF54814 2 106 1.02E-35 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 IX88_00135 c33405a233cdbb3fa95feff001038950 250 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.283 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 IX88_00135 c33405a233cdbb3fa95feff001038950 250 Gene3D G3DSA:3.30.1140.32 108 208 3.7E-45 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00135 c33405a233cdbb3fa95feff001038950 250 Pfam PF07650 KH domain 39 110 6.4E-18 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00135 c33405a233cdbb3fa95feff001038950 250 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00135 c33405a233cdbb3fa95feff001038950 250 SMART SM00322 60 125 4.4E-6 T 11-10-2018 IPR004087 K Homology domain GO:0003676 IX88_11340 e0797234c1cb0e1e6f6b0d0dd33b77a8 268 Pfam PF01965 DJ-1/PfpI family 64 262 1.4E-10 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 IX88_11340 e0797234c1cb0e1e6f6b0d0dd33b77a8 268 SUPERFAMILY SSF52317 40 264 1.24E-65 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_11340 e0797234c1cb0e1e6f6b0d0dd33b77a8 268 Gene3D G3DSA:3.40.50.880 14 267 1.5E-72 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_15840 ba9dad6824b3f8d4a6412cd0a7994df9 199 Hamap MF_00165 Thymidylate kinase [tmk]. 1 198 27.781 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 IX88_15840 ba9dad6824b3f8d4a6412cd0a7994df9 199 SUPERFAMILY SSF52540 1 196 9.74E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_15840 ba9dad6824b3f8d4a6412cd0a7994df9 199 Pfam PF02223 Thymidylate kinase 5 193 9.1E-54 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 IX88_15840 ba9dad6824b3f8d4a6412cd0a7994df9 199 Gene3D G3DSA:3.40.50.300 1 199 1.5E-65 T 11-10-2018 IX88_15840 ba9dad6824b3f8d4a6412cd0a7994df9 199 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 191 5.3E-55 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 IX88_02340 384957a399623b2dfdd89d4946f64ed3 184 SUPERFAMILY SSF58014 36 131 2.48E-18 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 IX88_02340 384957a399623b2dfdd89d4946f64ed3 184 PRINTS PR00773 GrpE protein signature 138 153 1.8E-9 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 IX88_02340 384957a399623b2dfdd89d4946f64ed3 184 PRINTS PR00773 GrpE protein signature 163 182 1.8E-9 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 IX88_02340 384957a399623b2dfdd89d4946f64ed3 184 PRINTS PR00773 GrpE protein signature 63 79 1.8E-9 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 IX88_02340 384957a399623b2dfdd89d4946f64ed3 184 Hamap MF_01151 Protein GrpE [grpE]. 3 184 16.1 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 IX88_02340 384957a399623b2dfdd89d4946f64ed3 184 Gene3D G3DSA:3.90.20.20 2 130 1.3E-14 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 IX88_02340 384957a399623b2dfdd89d4946f64ed3 184 Pfam PF01025 GrpE 28 183 9.9E-35 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 IX88_02340 384957a399623b2dfdd89d4946f64ed3 184 ProSitePatterns PS01071 grpE protein signature. 141 182 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 IX88_02340 384957a399623b2dfdd89d4946f64ed3 184 Gene3D G3DSA:2.30.22.10 131 184 2.3E-14 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 IX88_02340 384957a399623b2dfdd89d4946f64ed3 184 SUPERFAMILY SSF51064 138 183 8.37E-11 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 IX88_03895 25da18a33ea61bbaf6e6c0091bab6b79 184 Gene3D G3DSA:3.40.1740.10 1 184 2.5E-74 T 11-10-2018 IX88_03895 25da18a33ea61bbaf6e6c0091bab6b79 184 Pfam PF02622 Uncharacterized ACR, COG1678 15 171 1.5E-44 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 IX88_03895 25da18a33ea61bbaf6e6c0091bab6b79 184 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 4 184 33.269 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 IX88_03895 25da18a33ea61bbaf6e6c0091bab6b79 184 SUPERFAMILY SSF143456 5 184 2.22E-59 T 11-10-2018 IX88_06380 7dce9341279eb163c3464d17f99bcddf 240 SUPERFAMILY SSF63848 134 230 5.1E-26 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 IX88_06380 7dce9341279eb163c3464d17f99bcddf 240 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 231 6.9E-38 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 IX88_06380 7dce9341279eb163c3464d17f99bcddf 240 Gene3D G3DSA:2.160.20.70 128 239 6.3E-26 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 IX88_06380 7dce9341279eb163c3464d17f99bcddf 240 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 136 231 1.3E-25 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 IX88_06380 7dce9341279eb163c3464d17f99bcddf 240 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 3 239 19.49 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 IX88_14345 e4da6a118877ea6be80875547eba2a49 207 SUPERFAMILY SSF109604 23 205 2.06E-26 T 11-10-2018 IX88_14345 e4da6a118877ea6be80875547eba2a49 207 Gene3D G3DSA:1.10.3210.10 20 181 4.8E-7 T 11-10-2018 IX88_14345 e4da6a118877ea6be80875547eba2a49 207 PIRSF PIRSF035170 15 207 7.8E-47 T 11-10-2018 IPR009218 Predicted HD phosphohydrolase IX88_10980 2369bdc6290103df8368965aa03b0e32 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.2E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10980 2369bdc6290103df8368965aa03b0e32 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.2E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10980 2369bdc6290103df8368965aa03b0e32 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.2E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10980 2369bdc6290103df8368965aa03b0e32 278 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 181 2.3E-4 T 11-10-2018 IX88_10980 2369bdc6290103df8368965aa03b0e32 278 SUPERFAMILY SSF51735 4 239 2.85E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_10980 2369bdc6290103df8368965aa03b0e32 278 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_10980 2369bdc6290103df8368965aa03b0e32 278 Gene3D G3DSA:3.40.50.720 1 271 6.9E-61 T 11-10-2018 IX88_10980 2369bdc6290103df8368965aa03b0e32 278 Pfam PF00106 short chain dehydrogenase 9 199 3.7E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10980 2369bdc6290103df8368965aa03b0e32 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10980 2369bdc6290103df8368965aa03b0e32 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10980 2369bdc6290103df8368965aa03b0e32 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10980 2369bdc6290103df8368965aa03b0e32 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10980 2369bdc6290103df8368965aa03b0e32 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 6.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_15685 6de974728b033fc23e24738c63a1e63b 218 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 14 205 4.3E-32 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like IX88_15685 6de974728b033fc23e24738c63a1e63b 218 Pfam PF12710 haloacid dehalogenase-like hydrolase 15 193 1.9E-28 T 11-10-2018 IX88_15685 6de974728b033fc23e24738c63a1e63b 218 Gene3D G3DSA:3.40.50.1000 14 208 1.7E-37 T 11-10-2018 IPR023214 HAD superfamily IX88_15685 6de974728b033fc23e24738c63a1e63b 218 Gene3D G3DSA:1.20.1440.100 26 97 1.7E-37 T 11-10-2018 IX88_15685 6de974728b033fc23e24738c63a1e63b 218 SUPERFAMILY SSF56784 13 206 7.83E-21 T 11-10-2018 IPR036412 HAD-like superfamily IX88_15685 6de974728b033fc23e24738c63a1e63b 218 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 14 196 5.2E-24 T 11-10-2018 IX88_15505 2def01f9f7c6eebdd0f341f6e8dc14a9 945 Gene3D G3DSA:3.40.50.10810 156 427 1.4E-86 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily IX88_15505 2def01f9f7c6eebdd0f341f6e8dc14a9 945 Pfam PF00176 SNF2 family N-terminal domain 180 352 1.3E-11 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 IX88_15505 2def01f9f7c6eebdd0f341f6e8dc14a9 945 Gene3D G3DSA:3.40.50.300 437 612 7.9E-39 T 11-10-2018 IX88_15505 2def01f9f7c6eebdd0f341f6e8dc14a9 945 Gene3D G3DSA:2.30.30.140 5 57 4.0E-24 T 11-10-2018 IX88_15505 2def01f9f7c6eebdd0f341f6e8dc14a9 945 Gene3D G3DSA:2.30.30.930 59 120 3.1E-6 T 11-10-2018 IX88_15505 2def01f9f7c6eebdd0f341f6e8dc14a9 945 Pfam PF12137 RNA polymerase recycling family C-terminal 585 942 1.3E-121 T 11-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 IX88_15505 2def01f9f7c6eebdd0f341f6e8dc14a9 945 Gene3D G3DSA:3.30.360.80 691 762 2.3E-21 T 11-10-2018 IX88_15505 2def01f9f7c6eebdd0f341f6e8dc14a9 945 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 5 943 26.818 T 11-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 IX88_15505 2def01f9f7c6eebdd0f341f6e8dc14a9 945 SUPERFAMILY SSF52540 282 619 1.5E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_15505 2def01f9f7c6eebdd0f341f6e8dc14a9 945 Pfam PF00271 Helicase conserved C-terminal domain 472 580 6.0E-12 T 11-10-2018 IPR001650 Helicase, C-terminal IX88_15505 2def01f9f7c6eebdd0f341f6e8dc14a9 945 SMART SM00487 156 355 5.1E-19 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain IX88_15505 2def01f9f7c6eebdd0f341f6e8dc14a9 945 SUPERFAMILY SSF52540 145 386 1.42E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_15505 2def01f9f7c6eebdd0f341f6e8dc14a9 945 SMART SM00490 496 580 1.5E-14 T 11-10-2018 IPR001650 Helicase, C-terminal IX88_15400 bba746253088b8d686f25259da8bfbab 462 SUPERFAMILY SSF48557 4 447 5.81E-104 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 IX88_15400 bba746253088b8d686f25259da8bfbab 462 Gene3D G3DSA:1.10.275.10 1 115 3.5E-47 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal IX88_15400 bba746253088b8d686f25259da8bfbab 462 Gene3D G3DSA:1.10.40.30 379 445 2.7E-149 T 11-10-2018 IX88_15400 bba746253088b8d686f25259da8bfbab 462 Gene3D G3DSA:1.20.200.10 116 446 2.7E-149 T 11-10-2018 IX88_15400 bba746253088b8d686f25259da8bfbab 462 ProSitePatterns PS00163 Fumarate lyases signature. 291 300 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 IX88_15400 bba746253088b8d686f25259da8bfbab 462 Pfam PF08328 Adenylosuccinate lyase C-terminal 328 445 4.1E-46 T 11-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 IX88_15400 bba746253088b8d686f25259da8bfbab 462 PRINTS PR00149 Fumarate lyase superfamily signature 160 178 1.8E-17 T 11-10-2018 IPR000362 Fumarate lyase family IX88_15400 bba746253088b8d686f25259da8bfbab 462 PRINTS PR00149 Fumarate lyase superfamily signature 115 133 1.8E-17 T 11-10-2018 IPR000362 Fumarate lyase family IX88_15400 bba746253088b8d686f25259da8bfbab 462 PRINTS PR00149 Fumarate lyase superfamily signature 248 275 1.8E-17 T 11-10-2018 IPR000362 Fumarate lyase family IX88_15400 bba746253088b8d686f25259da8bfbab 462 PRINTS PR00149 Fumarate lyase superfamily signature 291 307 1.8E-17 T 11-10-2018 IPR000362 Fumarate lyase family IX88_15400 bba746253088b8d686f25259da8bfbab 462 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 10 454 2.1E-130 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 IX88_15400 bba746253088b8d686f25259da8bfbab 462 Pfam PF00206 Lyase 12 309 8.6E-65 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal IX88_14495 38d59029da30cc59f14442b98d4366b9 343 Pfam PF03466 LysR substrate binding domain 88 295 4.1E-42 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_14495 38d59029da30cc59f14442b98d4366b9 343 SUPERFAMILY SSF46785 5 87 6.54E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_14495 38d59029da30cc59f14442b98d4366b9 343 Gene3D G3DSA:3.40.190.10 91 293 3.8E-65 T 11-10-2018 IX88_14495 38d59029da30cc59f14442b98d4366b9 343 SUPERFAMILY SSF53850 89 298 2.17E-44 T 11-10-2018 IX88_14495 38d59029da30cc59f14442b98d4366b9 343 Gene3D G3DSA:1.10.10.10 4 90 1.7E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_14495 38d59029da30cc59f14442b98d4366b9 343 Gene3D G3DSA:3.40.190.10 163 266 3.8E-65 T 11-10-2018 IX88_14495 38d59029da30cc59f14442b98d4366b9 343 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 7.6E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_04745 e17de8fd3b2d25f1530b4422c7cb44bd 542 SUPERFAMILY SSF53720 34 508 2.49E-101 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_04745 e17de8fd3b2d25f1530b4422c7cb44bd 542 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 314 325 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 IX88_04745 e17de8fd3b2d25f1530b4422c7cb44bd 542 Gene3D G3DSA:3.40.605.10 66 502 3.6E-101 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_04745 e17de8fd3b2d25f1530b4422c7cb44bd 542 Gene3D G3DSA:3.40.309.10 290 481 3.6E-101 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_04745 e17de8fd3b2d25f1530b4422c7cb44bd 542 Pfam PF00171 Aldehyde dehydrogenase family 63 507 1.0E-95 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 Pfam PF00117 Glutamine amidotransferase class-I 196 372 1.1E-46 T 11-10-2018 IPR017926 Glutamine amidotransferase IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 PRINTS PR00097 Anthranilate synthase component II signature 235 244 1.5E-5 T 11-10-2018 IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.5E-5 T 11-10-2018 IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.5E-5 T 11-10-2018 IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 2.0E-143 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 SUPERFAMILY SSF52317 157 376 4.95E-60 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 135 2.4E-52 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 4.8E-11 T 11-10-2018 IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 4.8E-11 T 11-10-2018 IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 4.8E-11 T 11-10-2018 IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 Gene3D G3DSA:3.50.30.20 3 154 5.2E-59 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 47.257 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 SMART SM01097 3 136 2.1E-91 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 Gene3D G3DSA:3.40.50.880 155 377 2.8E-70 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 3.6E-39 T 11-10-2018 IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 3.6E-39 T 11-10-2018 IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 3.6E-39 T 11-10-2018 IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 3.6E-39 T 11-10-2018 IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 3.6E-39 T 11-10-2018 IX88_16600 8cdd992ca5f29b6450499b264072e81d 379 SUPERFAMILY SSF52021 4 143 1.09E-55 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_00370 4fda1a651ffc8faeb44d999c6575f817 689 SUPERFAMILY SSF109604 337 489 1.57E-15 T 11-10-2018 IX88_00370 4fda1a651ffc8faeb44d999c6575f817 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 687 24.774 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IX88_00370 4fda1a651ffc8faeb44d999c6575f817 689 Pfam PF05746 DALR anticodon binding domain 582 678 1.7E-7 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 IX88_00370 4fda1a651ffc8faeb44d999c6575f817 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 688 4.8E-232 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IX88_00370 4fda1a651ffc8faeb44d999c6575f817 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 5.2E-33 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IX88_00370 4fda1a651ffc8faeb44d999c6575f817 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 5.2E-33 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IX88_00370 4fda1a651ffc8faeb44d999c6575f817 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 5.2E-33 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IX88_00370 4fda1a651ffc8faeb44d999c6575f817 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 5.2E-33 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IX88_00370 4fda1a651ffc8faeb44d999c6575f817 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 5.2E-33 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IX88_00370 4fda1a651ffc8faeb44d999c6575f817 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 550 3.3E-202 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 IX88_03395 2e2cef2ce8f56340cb99d9713a2e48a1 394 Gene3D G3DSA:2.30.42.10 113 201 9.8E-67 T 11-10-2018 IX88_03395 2e2cef2ce8f56340cb99d9713a2e48a1 394 SUPERFAMILY SSF52096 53 377 1.82E-61 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_03395 2e2cef2ce8f56340cb99d9713a2e48a1 394 SUPERFAMILY SSF50156 116 189 1.39E-8 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 IX88_03395 2e2cef2ce8f56340cb99d9713a2e48a1 394 Gene3D G3DSA:3.30.750.44 64 347 9.8E-67 T 11-10-2018 IX88_03395 2e2cef2ce8f56340cb99d9713a2e48a1 394 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 65 377 4.1E-68 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 IX88_03395 2e2cef2ce8f56340cb99d9713a2e48a1 394 Pfam PF03572 Peptidase family S41 210 369 8.4E-45 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 IX88_03395 2e2cef2ce8f56340cb99d9713a2e48a1 394 Gene3D G3DSA:3.90.226.10 202 368 9.8E-67 T 11-10-2018 IX88_03395 2e2cef2ce8f56340cb99d9713a2e48a1 394 SMART SM00245 184 372 3.1E-46 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 IX88_17520 caf7b32eb567d24f68b392fe3e6d76df 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 178 196 5.2E-39 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IX88_17520 caf7b32eb567d24f68b392fe3e6d76df 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 215 232 5.2E-39 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IX88_17520 caf7b32eb567d24f68b392fe3e6d76df 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 266 275 5.2E-39 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IX88_17520 caf7b32eb567d24f68b392fe3e6d76df 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 244 255 5.2E-39 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IX88_17520 caf7b32eb567d24f68b392fe3e6d76df 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 144 158 5.2E-39 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IX88_17520 caf7b32eb567d24f68b392fe3e6d76df 298 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 2 296 35.561 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IX88_17520 caf7b32eb567d24f68b392fe3e6d76df 298 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 42 297 4.1E-108 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 IX88_17520 caf7b32eb567d24f68b392fe3e6d76df 298 Gene3D G3DSA:3.90.226.10 42 297 2.3E-75 T 11-10-2018 IX88_17520 caf7b32eb567d24f68b392fe3e6d76df 298 Pfam PF01039 Carboxyl transferase domain 107 257 4.6E-18 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 IX88_17520 caf7b32eb567d24f68b392fe3e6d76df 298 SUPERFAMILY SSF52096 43 296 1.62E-76 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_08935 3ba8be433d0ccdce037fa5a81e0af462 1157 SUPERFAMILY SSF52172 931 1085 3.42E-26 T 11-10-2018 IPR011006 CheY-like superfamily IX88_08935 3ba8be433d0ccdce037fa5a81e0af462 1157 SMART SM00387 799 912 2.8E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_08935 3ba8be433d0ccdce037fa5a81e0af462 1157 Gene3D G3DSA:1.10.4160.10 34 492 5.4E-15 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily IX88_08935 3ba8be433d0ccdce037fa5a81e0af462 1157 SUPERFAMILY SSF55874 742 906 7.07E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_08935 3ba8be433d0ccdce037fa5a81e0af462 1157 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 799 906 6.8E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_08935 3ba8be433d0ccdce037fa5a81e0af462 1157 Gene3D G3DSA:1.10.287.130 673 752 3.2E-23 T 11-10-2018 IX88_08935 3ba8be433d0ccdce037fa5a81e0af462 1157 Pfam PF00512 His Kinase A (phospho-acceptor) domain 687 752 1.3E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_08935 3ba8be433d0ccdce037fa5a81e0af462 1157 Gene3D G3DSA:3.40.50.12740 932 1102 5.9E-24 T 11-10-2018 IX88_08935 3ba8be433d0ccdce037fa5a81e0af462 1157 PRINTS PR00344 Bacterial sensor protein C-terminal signature 894 907 4.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_08935 3ba8be433d0ccdce037fa5a81e0af462 1157 PRINTS PR00344 Bacterial sensor protein C-terminal signature 870 888 4.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_08935 3ba8be433d0ccdce037fa5a81e0af462 1157 PRINTS PR00344 Bacterial sensor protein C-terminal signature 853 863 4.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_08935 3ba8be433d0ccdce037fa5a81e0af462 1157 PRINTS PR00344 Bacterial sensor protein C-terminal signature 835 849 4.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_08935 3ba8be433d0ccdce037fa5a81e0af462 1157 Pfam PF00072 Response regulator receiver domain 935 1045 3.2E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_08935 3ba8be433d0ccdce037fa5a81e0af462 1157 SUPERFAMILY SSF47384 673 753 8.04E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IX88_08935 3ba8be433d0ccdce037fa5a81e0af462 1157 SMART SM00388 686 752 6.8E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_08935 3ba8be433d0ccdce037fa5a81e0af462 1157 Gene3D G3DSA:3.30.565.10 753 912 2.1E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_08935 3ba8be433d0ccdce037fa5a81e0af462 1157 SMART SM00448 933 1045 5.8E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_05170 22c041369335b70d712887dd5e1feaf3 206 SUPERFAMILY SSF47616 77 202 6.96E-35 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IX88_05170 22c041369335b70d712887dd5e1feaf3 206 Gene3D G3DSA:3.40.30.10 2 203 1.2E-83 T 11-10-2018 IX88_05170 22c041369335b70d712887dd5e1feaf3 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 6 80 2.5E-13 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 IX88_05170 22c041369335b70d712887dd5e1feaf3 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 195 2.3E-6 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal IX88_05170 22c041369335b70d712887dd5e1feaf3 206 Gene3D G3DSA:1.20.1050.10 87 194 1.2E-83 T 11-10-2018 IX88_05170 22c041369335b70d712887dd5e1feaf3 206 SUPERFAMILY SSF52833 1 83 6.35E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_09745 15d583dab162d4217969d20f7045145f 345 Gene3D G3DSA:3.20.20.70 1 345 9.9E-157 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_09745 15d583dab162d4217969d20f7045145f 345 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 3.3E-95 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 IX88_09745 15d583dab162d4217969d20f7045145f 345 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 IX88_09745 15d583dab162d4217969d20f7045145f 345 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 344 1.3E-194 T 11-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 IX88_09745 15d583dab162d4217969d20f7045145f 345 PIRSF PIRSF001359 1 329 1.0E-81 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 IX88_09745 15d583dab162d4217969d20f7045145f 345 SUPERFAMILY SSF51569 3 328 6.89E-105 T 11-10-2018 IX88_09745 15d583dab162d4217969d20f7045145f 345 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 2.5E-91 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 Pfam PF01043 SecA preprotein cross-linking domain 232 355 5.8E-37 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 SUPERFAMILY SSF52540 6 412 1.82E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 SUPERFAMILY SSF81767 227 365 1.44E-40 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 Pfam PF07517 SecA DEAD-like domain 8 399 7.6E-129 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 Gene3D G3DSA:3.40.50.300 22 412 5.5E-171 T 11-10-2018 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 Gene3D G3DSA:1.10.3060.10 619 830 7.3E-72 T 11-10-2018 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 PRINTS PR00906 SecA protein signature 336 358 1.7E-70 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 PRINTS PR00906 SecA protein signature 410 423 1.7E-70 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 PRINTS PR00906 SecA protein signature 373 390 1.7E-70 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 PRINTS PR00906 SecA protein signature 63 87 1.7E-70 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 PRINTS PR00906 SecA protein signature 170 190 1.7E-70 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 PRINTS PR00906 SecA protein signature 117 127 1.7E-70 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 PRINTS PR00906 SecA protein signature 101 115 1.7E-70 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 830 19.64 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 Pfam PF07516 SecA Wing and Scaffold domain 615 827 9.0E-66 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 SMART SM00958 228 355 3.3E-72 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 SMART SM00957 6 399 9.7E-295 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 SUPERFAMILY SSF52540 413 616 8.27E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 814 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 Pfam PF02810 SEC-C motif 888 906 6.5E-10 T 11-10-2018 IPR004027 SEC-C motif IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 ProSitePatterns PS01312 SecA family signature. 498 513 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 Gene3D G3DSA:3.40.50.300 414 618 1.2E-84 T 11-10-2018 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 Gene3D G3DSA:3.90.1440.10 229 365 5.5E-171 T 11-10-2018 IX88_17490 6f98eef99d941d7803cdaa9f9246e004 907 SUPERFAMILY SSF81886 618 896 4.97E-78 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily IX88_01550 d16798e484f5af228bae40300d1c2d00 455 TIGRFAM TIGR03173 pbuX: xanthine permease 24 432 5.3E-154 T 11-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 IX88_01550 d16798e484f5af228bae40300d1c2d00 455 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 347 367 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 IX88_01550 d16798e484f5af228bae40300d1c2d00 455 Pfam PF00860 Permease family 20 395 2.9E-89 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 IX88_01550 d16798e484f5af228bae40300d1c2d00 455 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 20 430 1.5E-108 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 IX88_05085 1d27bcba7e9af5258a425912e6e550d7 304 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 289 3.7E-66 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme IX88_05085 1d27bcba7e9af5258a425912e6e550d7 304 TIGRFAM TIGR01136 cysKM: cysteine synthase 17 300 1.5E-117 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 IX88_05085 1d27bcba7e9af5258a425912e6e550d7 304 TIGRFAM TIGR01138 cysM: cysteine synthase B 16 300 3.6E-138 T 11-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 IX88_05085 1d27bcba7e9af5258a425912e6e550d7 304 SUPERFAMILY SSF53686 17 300 4.85E-90 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IX88_05085 1d27bcba7e9af5258a425912e6e550d7 304 Gene3D G3DSA:3.40.50.1100 19 296 8.5E-106 T 11-10-2018 IX88_05085 1d27bcba7e9af5258a425912e6e550d7 304 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 41 59 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 IX88_05085 1d27bcba7e9af5258a425912e6e550d7 304 Gene3D G3DSA:3.40.50.1100 46 161 8.5E-106 T 11-10-2018 IX88_17550 05c471412110764a86c4010c8ee9cc22 409 SUPERFAMILY SSF53686 14 399 4.85E-149 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IX88_17550 05c471412110764a86c4010c8ee9cc22 409 PIRSF PIRSF001413 2 408 3.5E-166 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 IX88_17550 05c471412110764a86c4010c8ee9cc22 409 Gene3D G3DSA:3.40.50.1100 65 395 7.2E-185 T 11-10-2018 IX88_17550 05c471412110764a86c4010c8ee9cc22 409 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 64 389 1.3E-46 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme IX88_17550 05c471412110764a86c4010c8ee9cc22 409 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 13 402 52.136 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 IX88_17550 05c471412110764a86c4010c8ee9cc22 409 Gene3D G3DSA:3.40.50.1100 21 217 7.2E-185 T 11-10-2018 IX88_17550 05c471412110764a86c4010c8ee9cc22 409 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 18 400 2.2E-190 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 IX88_17550 05c471412110764a86c4010c8ee9cc22 409 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 92 106 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 IX88_17890 5ee4abb098340aeb1545f4b4b55a590b 336 Gene3D G3DSA:3.60.21.10 114 312 2.2E-20 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like IX88_17890 5ee4abb098340aeb1545f4b4b55a590b 336 SUPERFAMILY SSF56300 116 335 1.9E-31 T 11-10-2018 IX88_17890 5ee4abb098340aeb1545f4b4b55a590b 336 Pfam PF00149 Calcineurin-like phosphoesterase 116 307 7.6E-12 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 IX88_04440 619178186f905356c4d26abc05fea825 428 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 3.4E-117 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 IX88_04440 619178186f905356c4d26abc05fea825 428 SUPERFAMILY SSF118215 8 412 9.55E-123 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IX88_04440 619178186f905356c4d26abc05fea825 428 Gene3D G3DSA:1.10.3860.10 1 426 5.3E-136 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IX88_04440 619178186f905356c4d26abc05fea825 428 Hamap MF_02063 Proton/glutamate-aspartate symporter [gltP]. 1 428 43.525 T 11-10-2018 IPR034703 Proton/glutamate-aspartate symporter GltP GO:0006835|GO:0015293|GO:0016021 IX88_04440 619178186f905356c4d26abc05fea825 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site IX88_04440 619178186f905356c4d26abc05fea825 428 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 8.0E-50 T 11-10-2018 IX88_04440 619178186f905356c4d26abc05fea825 428 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 8.0E-50 T 11-10-2018 IX88_04440 619178186f905356c4d26abc05fea825 428 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 8.0E-50 T 11-10-2018 IX88_04440 619178186f905356c4d26abc05fea825 428 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 8.0E-50 T 11-10-2018 IX88_04440 619178186f905356c4d26abc05fea825 428 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 8.0E-50 T 11-10-2018 IX88_04440 619178186f905356c4d26abc05fea825 428 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 8.0E-50 T 11-10-2018 IX88_04440 619178186f905356c4d26abc05fea825 428 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 8.0E-50 T 11-10-2018 IX88_04440 619178186f905356c4d26abc05fea825 428 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 8.0E-50 T 11-10-2018 IX88_02685 b8f758b731588f76f9636b133d15f490 236 SMART SM00345 22 80 8.4E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_02685 b8f758b731588f76f9636b133d15f490 236 SUPERFAMILY SSF46785 14 106 1.95E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_02685 b8f758b731588f76f9636b133d15f490 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 2.3E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_02685 b8f758b731588f76f9636b133d15f490 236 SUPERFAMILY SSF48008 86 223 3.66E-25 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_02685 b8f758b731588f76f9636b133d15f490 236 SMART SM00895 90 217 2.5E-21 T 11-10-2018 IPR011711 GntR, C-terminal IX88_02685 b8f758b731588f76f9636b133d15f490 236 Gene3D G3DSA:1.20.120.530 85 231 5.7E-30 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_02685 b8f758b731588f76f9636b133d15f490 236 Gene3D G3DSA:1.10.10.10 6 80 1.1E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_02685 b8f758b731588f76f9636b133d15f490 236 Pfam PF07729 FCD domain 90 216 6.9E-25 T 11-10-2018 IPR011711 GntR, C-terminal IX88_06545 745876e9a90bceb73ebe12d6995b5301 569 SUPERFAMILY SSF52540 17 446 9.19E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_06545 745876e9a90bceb73ebe12d6995b5301 569 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 35 422 3.1E-18 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IX88_06545 745876e9a90bceb73ebe12d6995b5301 569 Gene3D G3DSA:3.40.50.300 250 453 2.1E-11 T 11-10-2018 IX88_06545 745876e9a90bceb73ebe12d6995b5301 569 Gene3D G3DSA:3.40.50.300 15 100 2.2E-9 T 11-10-2018 IX88_18095 ac21544145171a4d8d10a47365af727b 158 Gene3D G3DSA:3.40.390.30 1 158 5.3E-48 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 IX88_18095 ac21544145171a4d8d10a47365af727b 158 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 119 129 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site IX88_18095 ac21544145171a4d8d10a47365af727b 158 Pfam PF02130 Uncharacterized protein family UPF0054 22 150 5.1E-37 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 IX88_18095 ac21544145171a4d8d10a47365af727b 158 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 154 23.452 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 IX88_18095 ac21544145171a4d8d10a47365af727b 158 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 41 150 8.7E-35 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 IX88_18095 ac21544145171a4d8d10a47365af727b 158 SUPERFAMILY SSF55486 17 156 1.03E-44 T 11-10-2018 IX88_00115 7565f0bba13127ad8763ed80e9ed9605 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00115 7565f0bba13127ad8763ed80e9ed9605 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.5E-54 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 IX88_00115 7565f0bba13127ad8763ed80e9ed9605 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.999 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 IX88_00115 7565f0bba13127ad8763ed80e9ed9605 122 SMART SM01374 1 122 9.2E-85 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 IX88_00115 7565f0bba13127ad8763ed80e9ed9605 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 5.3E-57 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 IX88_00115 7565f0bba13127ad8763ed80e9ed9605 122 Gene3D G3DSA:2.40.150.20 1 122 6.2E-54 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 IX88_00115 7565f0bba13127ad8763ed80e9ed9605 122 SUPERFAMILY SSF50193 1 122 6.28E-51 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 IX88_01420 185a2fe317be2720a5c2978b0287dcf6 905 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 880 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 IX88_01420 185a2fe317be2720a5c2978b0287dcf6 905 SUPERFAMILY SSF52518 469 696 1.18E-95 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_01420 185a2fe317be2720a5c2978b0287dcf6 905 PIRSF PIRSF000156 2 884 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 IX88_01420 185a2fe317be2720a5c2978b0287dcf6 905 SUPERFAMILY SSF52518 54 464 1.51E-138 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_01420 185a2fe317be2720a5c2978b0287dcf6 905 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 134 292 2.1E-8 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 IX88_01420 185a2fe317be2720a5c2978b0287dcf6 905 Gene3D G3DSA:3.40.50.920 702 883 6.4E-67 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 IX88_01420 185a2fe317be2720a5c2978b0287dcf6 905 Gene3D G3DSA:3.40.50.970 468 701 4.7E-107 T 11-10-2018 IX88_01420 185a2fe317be2720a5c2978b0287dcf6 905 SUPERFAMILY SSF52922 697 879 1.83E-50 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 IX88_01420 185a2fe317be2720a5c2978b0287dcf6 905 Gene3D G3DSA:3.40.50.970 53 467 7.8E-134 T 11-10-2018 IX88_02250 3eabb94b703e0d0d2b9bd4c0a036b8a0 175 Pfam PF00156 Phosphoribosyl transferase domain 13 160 3.8E-25 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 IX88_02250 3eabb94b703e0d0d2b9bd4c0a036b8a0 175 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 1.3E-68 T 11-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 IX88_02250 3eabb94b703e0d0d2b9bd4c0a036b8a0 175 SUPERFAMILY SSF53271 7 173 2.62E-53 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like IX88_02250 3eabb94b703e0d0d2b9bd4c0a036b8a0 175 Gene3D G3DSA:3.40.50.2020 2 175 3.7E-64 T 11-10-2018 IX88_03655 df142ed008c65147a3889758b14f76ab 168 SUPERFAMILY SSF160369 5 162 3.79E-43 T 11-10-2018 IX88_03655 df142ed008c65147a3889758b14f76ab 168 Gene3D G3DSA:3.30.70.1730 1 126 7.5E-31 T 11-10-2018 IX88_03655 df142ed008c65147a3889758b14f76ab 168 Pfam PF00466 Ribosomal protein L10 6 103 5.5E-24 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 IX88_03655 df142ed008c65147a3889758b14f76ab 168 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 11-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_03655 df142ed008c65147a3889758b14f76ab 168 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 163 25.602 T 11-10-2018 IPR022973 Ribosomal protein L10 IX88_00945 7be2de08add787d4541f08241318a43b 197 Gene3D G3DSA:3.30.230.40 1 91 7.0E-38 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 IX88_00945 7be2de08add787d4541f08241318a43b 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 IX88_00945 7be2de08add787d4541f08241318a43b 197 Gene3D G3DSA:3.30.230.40 92 197 9.4E-39 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 IX88_00945 7be2de08add787d4541f08241318a43b 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 IX88_00945 7be2de08add787d4541f08241318a43b 197 SUPERFAMILY SSF54211 4 88 1.77E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_00945 7be2de08add787d4541f08241318a43b 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 41.394 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 IX88_00945 7be2de08add787d4541f08241318a43b 197 SUPERFAMILY SSF54211 89 181 2.28E-35 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_00945 7be2de08add787d4541f08241318a43b 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 1.1E-63 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 IX88_04790 d770656506435bb56bab0fa841a70564 143 SMART SM00562 3 140 8.1E-89 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IX88_04790 d770656506435bb56bab0fa841a70564 143 SUPERFAMILY SSF54919 1 140 1.7E-58 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IX88_04790 d770656506435bb56bab0fa841a70564 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.629 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IX88_04790 d770656506435bb56bab0fa841a70564 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.2E-40 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IX88_04790 d770656506435bb56bab0fa841a70564 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.2E-40 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IX88_04790 d770656506435bb56bab0fa841a70564 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.2E-40 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IX88_04790 d770656506435bb56bab0fa841a70564 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.2E-40 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IX88_04790 d770656506435bb56bab0fa841a70564 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.2E-40 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IX88_04790 d770656506435bb56bab0fa841a70564 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IX88_04790 d770656506435bb56bab0fa841a70564 143 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.2E-55 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IX88_04790 d770656506435bb56bab0fa841a70564 143 Gene3D G3DSA:3.30.70.141 1 143 2.6E-61 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IX88_05725 a2d22dca9f7f1b3a57dba59fc77e413d 549 Gene3D G3DSA:1.10.287.130 265 380 1.7E-25 T 11-10-2018 IX88_05725 a2d22dca9f7f1b3a57dba59fc77e413d 549 SUPERFAMILY SSF158472 265 312 1.83E-7 T 11-10-2018 IX88_05725 a2d22dca9f7f1b3a57dba59fc77e413d 549 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 487 1.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_05725 a2d22dca9f7f1b3a57dba59fc77e413d 549 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 1.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_05725 a2d22dca9f7f1b3a57dba59fc77e413d 549 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 512 1.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_05725 a2d22dca9f7f1b3a57dba59fc77e413d 549 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 532 1.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_05725 a2d22dca9f7f1b3a57dba59fc77e413d 549 Pfam PF00512 His Kinase A (phospho-acceptor) domain 315 379 2.4E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_05725 a2d22dca9f7f1b3a57dba59fc77e413d 549 SMART SM00388 314 379 2.6E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_05725 a2d22dca9f7f1b3a57dba59fc77e413d 549 SMART SM00304 261 313 5.2E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 IX88_05725 a2d22dca9f7f1b3a57dba59fc77e413d 549 SUPERFAMILY SSF55874 368 537 4.19E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_05725 a2d22dca9f7f1b3a57dba59fc77e413d 549 SMART SM00387 423 535 7.4E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_05725 a2d22dca9f7f1b3a57dba59fc77e413d 549 Pfam PF00672 HAMP domain 265 310 3.6E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 IX88_05725 a2d22dca9f7f1b3a57dba59fc77e413d 549 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 533 3.7E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_05725 a2d22dca9f7f1b3a57dba59fc77e413d 549 Gene3D G3DSA:3.30.565.10 386 535 7.6E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_05725 a2d22dca9f7f1b3a57dba59fc77e413d 549 SUPERFAMILY SSF47384 297 379 4.32E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IX88_09370 316ed20cd2cab4af9914266d702e047b 219 SUPERFAMILY SSF161098 8 202 5.1E-49 T 11-10-2018 IPR035906 MetI-like superfamily IX88_09370 316ed20cd2cab4af9914266d702e047b 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 217 5.1E-26 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_09370 316ed20cd2cab4af9914266d702e047b 219 Gene3D G3DSA:1.10.3720.10 2 217 5.5E-55 T 11-10-2018 IPR035906 MetI-like superfamily IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 Gene3D G3DSA:3.30.310.50 367 444 5.0E-24 T 11-10-2018 IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 SUPERFAMILY SSF55957 355 441 6.41E-23 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 Gene3D G3DSA:3.40.120.10 1 154 8.1E-46 T 11-10-2018 IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 441 46.67 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 Gene3D G3DSA:3.40.120.10 257 336 1.2E-66 T 11-10-2018 IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 4 439 1.2E-186 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 4.5E-14 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 4.5E-14 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 4.5E-14 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 370 438 1.3E-14 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 363 4.2E-32 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 SUPERFAMILY SSF53738 156 257 3.02E-33 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 SUPERFAMILY SSF53738 2 181 3.14E-47 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 252 2.3E-19 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 SUPERFAMILY SSF53738 258 362 1.73E-28 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 7.4E-41 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_01380 b350b6d54505f00a56edfbaa31d2fb0b 445 Gene3D G3DSA:3.40.120.10 175 359 1.2E-66 T 11-10-2018 IX88_16715 297c1c6a0408f63aa7ef750686531449 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 123 8.2E-24 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_16715 297c1c6a0408f63aa7ef750686531449 130 PIRSF PIRSF000178 1 129 6.6E-21 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_16715 297c1c6a0408f63aa7ef750686531449 130 SUPERFAMILY SSF81343 22 128 1.44E-23 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_16715 297c1c6a0408f63aa7ef750686531449 130 Gene3D G3DSA:1.20.1300.10 1 129 5.5E-32 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_16715 297c1c6a0408f63aa7ef750686531449 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 20 127 1.3E-30 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_07240 f289953f045803b30363ec4290b77597 402 Pfam PF01494 FAD binding domain 4 357 1.8E-35 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 IX88_07240 f289953f045803b30363ec4290b77597 402 Gene3D G3DSA:3.30.9.50 84 278 7.2E-94 T 11-10-2018 IX88_07240 f289953f045803b30363ec4290b77597 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 399 1.1E-108 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 IX88_07240 f289953f045803b30363ec4290b77597 402 SUPERFAMILY SSF51905 4 392 1.1E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07240 f289953f045803b30363ec4290b77597 402 Gene3D G3DSA:3.50.50.60 5 347 7.2E-94 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07240 f289953f045803b30363ec4290b77597 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 304 9.6E-19 T 11-10-2018 IX88_07240 f289953f045803b30363ec4290b77597 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 320 9.6E-19 T 11-10-2018 IX88_07240 f289953f045803b30363ec4290b77597 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 163 178 9.6E-19 T 11-10-2018 IX88_07240 f289953f045803b30363ec4290b77597 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 9.6E-19 T 11-10-2018 IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Gene3D G3DSA:2.150.10.10 1246 1365 1.8E-10 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 SUPERFAMILY SSF51120 1081 1301 1.31E-18 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1365 1383 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Gene3D G3DSA:2.60.40.10 285 361 6.3E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Gene3D G3DSA:2.60.40.10 117 194 7.6E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Gene3D G3DSA:2.60.40.10 533 613 1.1E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Gene3D G3DSA:2.60.40.10 449 529 1.1E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Gene3D G3DSA:2.60.40.10 365 445 3.8E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Gene3D G3DSA:2.60.40.10 202 277 6.8E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Gene3D G3DSA:2.60.40.10 832 909 6.3E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 SUPERFAMILY SSF51120 987 1122 6.28E-15 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 SUPERFAMILY SSF51120 1254 1486 4.71E-19 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Gene3D G3DSA:2.150.10.10 1366 1475 1.2E-7 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1194 1212 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Gene3D G3DSA:2.150.10.10 1002 1149 3.2E-15 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Gene3D G3DSA:2.150.10.10 1153 1226 1.3E-13 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 PRINTS PR00313 NodO calcium binding signature 1189 1197 3.6E-10 T 11-10-2018 IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 PRINTS PR00313 NodO calcium binding signature 1378 1387 3.6E-10 T 11-10-2018 IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 PRINTS PR00313 NodO calcium binding signature 1207 1215 3.6E-10 T 11-10-2018 IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 PRINTS PR00313 NodO calcium binding signature 1033 1044 3.6E-10 T 11-10-2018 IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 1541 1605 3.3E-8 T 11-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1351 1367 0.12 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1028 1043 0.29 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1199 1214 0.27 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1009 1025 0.0022 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1339 1349 55.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1180 1196 0.12 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1168 1178 55.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 IX88_11190 c15a1a27827e1c6054d43b91a3a1dfec 1618 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1370 1385 0.031 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 IX88_10935 8a503640d3ab59667b175885c806b67b 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 366 5.6E-77 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 IX88_10935 8a503640d3ab59667b175885c806b67b 396 Gene3D G3DSA:1.10.287.470 94 167 1.8E-95 T 11-10-2018 IX88_10935 8a503640d3ab59667b175885c806b67b 396 SUPERFAMILY SSF111369 49 292 5.89E-71 T 11-10-2018 IX88_10935 8a503640d3ab59667b175885c806b67b 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 287 3.8E-19 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IX88_10935 8a503640d3ab59667b175885c806b67b 396 Gene3D G3DSA:2.40.50.100 59 203 1.8E-95 T 11-10-2018 IX88_10935 8a503640d3ab59667b175885c806b67b 396 Gene3D G3DSA:2.40.420.20 298 366 1.8E-95 T 11-10-2018 IX88_10935 8a503640d3ab59667b175885c806b67b 396 Gene3D G3DSA:2.40.30.170 48 297 1.8E-95 T 11-10-2018 IX88_15115 35a1e83b69882da8476caa4743696448 791 Gene3D G3DSA:3.90.1170.50 17 137 6.2E-292 T 11-10-2018 IX88_15115 35a1e83b69882da8476caa4743696448 791 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 158 708 1.8E-198 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 IX88_15115 35a1e83b69882da8476caa4743696448 791 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 18 775 0.0 T 11-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 IX88_15115 35a1e83b69882da8476caa4743696448 791 SMART SM01008 30 137 1.2E-39 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead IX88_15115 35a1e83b69882da8476caa4743696448 791 Gene3D G3DSA:3.30.365.10 151 407 6.2E-292 T 11-10-2018 IX88_15115 35a1e83b69882da8476caa4743696448 791 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 30 133 1.7E-24 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead IX88_15115 35a1e83b69882da8476caa4743696448 791 Gene3D G3DSA:3.30.365.10 185 279 6.2E-292 T 11-10-2018 IX88_15115 35a1e83b69882da8476caa4743696448 791 Gene3D G3DSA:3.30.365.10 138 774 6.2E-292 T 11-10-2018 IX88_15115 35a1e83b69882da8476caa4743696448 791 Gene3D G3DSA:3.30.365.10 459 606 6.2E-292 T 11-10-2018 IX88_15115 35a1e83b69882da8476caa4743696448 791 SUPERFAMILY SSF56003 138 775 1.11E-201 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 IX88_15115 35a1e83b69882da8476caa4743696448 791 SUPERFAMILY SSF54665 9 135 2.62E-37 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily IX88_03720 1c2619c784a469dcc4de4367a81efd6a 176 Pfam PF06412 Conjugal transfer protein TraD 97 156 5.1E-7 T 11-10-2018 IPR009444 Conjugal transfer, TraD, alpha-type GO:0000746 IX88_11975 6c36efa371bfd11c6d2395a3ebe7d09e 248 Gene3D G3DSA:3.40.50.1820 23 245 1.4E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_11975 6c36efa371bfd11c6d2395a3ebe7d09e 248 Pfam PF07859 alpha/beta hydrolase fold 59 142 1.4E-8 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 IX88_11975 6c36efa371bfd11c6d2395a3ebe7d09e 248 SUPERFAMILY SSF53474 23 242 5.96E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_07155 131fe8bd189c3fe94c992eaf730c23f9 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 56 183 1.4E-49 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 IX88_07155 131fe8bd189c3fe94c992eaf730c23f9 447 Gene3D G3DSA:1.10.285.10 7 383 1.9E-173 T 11-10-2018 IX88_07155 131fe8bd189c3fe94c992eaf730c23f9 447 Gene3D G3DSA:1.10.285.10 385 447 3.2E-11 T 11-10-2018 IX88_07155 131fe8bd189c3fe94c992eaf730c23f9 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 371 382 2.4E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 IX88_07155 131fe8bd189c3fe94c992eaf730c23f9 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 113 127 2.4E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 IX88_07155 131fe8bd189c3fe94c992eaf730c23f9 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 192 214 2.4E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 IX88_07155 131fe8bd189c3fe94c992eaf730c23f9 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 234 254 2.4E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 IX88_07155 131fe8bd189c3fe94c992eaf730c23f9 447 Gene3D G3DSA:3.40.50.10860 54 189 1.9E-173 T 11-10-2018 IX88_07155 131fe8bd189c3fe94c992eaf730c23f9 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 201 445 1.5E-87 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 IX88_07155 131fe8bd189c3fe94c992eaf730c23f9 447 SUPERFAMILY SSF53223 6 195 5.76E-74 T 11-10-2018 IX88_07155 131fe8bd189c3fe94c992eaf730c23f9 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 121 134 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 IX88_07155 131fe8bd189c3fe94c992eaf730c23f9 447 SUPERFAMILY SSF51735 201 447 3.29E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_07155 131fe8bd189c3fe94c992eaf730c23f9 447 Gene3D G3DSA:3.40.50.720 208 372 1.9E-173 T 11-10-2018 IX88_07155 131fe8bd189c3fe94c992eaf730c23f9 447 SMART SM00839 203 445 2.6E-90 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 IX88_07155 131fe8bd189c3fe94c992eaf730c23f9 447 PIRSF PIRSF000185 21 447 6.1E-116 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 IX88_13690 184d48a6de3f2ac62b8b490649bacfaf 832 Gene3D G3DSA:2.60.40.3110 269 357 9.6E-9 T 11-10-2018 IX88_13690 184d48a6de3f2ac62b8b490649bacfaf 832 Pfam PF13953 PapC C-terminal domain 752 809 4.7E-14 T 11-10-2018 IPR025949 PapC-like, C-terminal domain IX88_13690 184d48a6de3f2ac62b8b490649bacfaf 832 Pfam PF00577 Outer membrane usher protein 241 740 1.0E-35 T 11-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 IX88_13690 184d48a6de3f2ac62b8b490649bacfaf 832 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 310 320 - T 11-10-2018 IPR018030 Fimbrial membrane usher, conserved site IX88_13690 184d48a6de3f2ac62b8b490649bacfaf 832 Gene3D G3DSA:2.60.40.2070 747 829 3.8E-9 T 11-10-2018 IX88_13690 184d48a6de3f2ac62b8b490649bacfaf 832 Gene3D G3DSA:2.60.40.2610 653 744 2.3E-11 T 11-10-2018 IX88_10195 7a92d02f340784edca403923bd8a9bde 206 Gene3D G3DSA:3.40.630.30 7 186 4.7E-43 T 11-10-2018 IX88_10195 7a92d02f340784edca403923bd8a9bde 206 SUPERFAMILY SSF55729 17 184 6.01E-42 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_10195 7a92d02f340784edca403923bd8a9bde 206 SMART SM01006 24 71 3.4E-14 T 11-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain IX88_10195 7a92d02f340784edca403923bd8a9bde 206 Pfam PF13523 Acetyltransferase (GNAT) domain 29 169 5.2E-36 T 11-10-2018 IX88_05060 27ea3003ef2cf62c68badd151372f173 133 Pfam PF02410 Ribosomal silencing factor during starvation 31 125 3.7E-26 T 11-10-2018 IX88_05060 27ea3003ef2cf62c68badd151372f173 133 SUPERFAMILY SSF81301 24 129 1.31E-36 T 11-10-2018 IX88_05060 27ea3003ef2cf62c68badd151372f173 133 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 29 125 1.1E-35 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS IX88_05060 27ea3003ef2cf62c68badd151372f173 133 Gene3D G3DSA:3.30.460.10 18 129 1.1E-36 T 11-10-2018 IX88_05060 27ea3003ef2cf62c68badd151372f173 133 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 20 126 24.564 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS IX88_01510 ef9bcf78fce47b5651467626192867d0 397 SMART SM00267 220 388 6.3E-60 T 11-10-2018 IPR000160 GGDEF domain IX88_01510 ef9bcf78fce47b5651467626192867d0 397 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 228 387 6.2E-47 T 11-10-2018 IPR000160 GGDEF domain IX88_01510 ef9bcf78fce47b5651467626192867d0 397 SUPERFAMILY SSF55073 236 389 1.88E-46 T 11-10-2018 IPR029787 Nucleotide cyclase IX88_01510 ef9bcf78fce47b5651467626192867d0 397 Pfam PF00990 Diguanylate cyclase, GGDEF domain 232 384 6.7E-47 T 11-10-2018 IPR000160 GGDEF domain IX88_01510 ef9bcf78fce47b5651467626192867d0 397 Gene3D G3DSA:3.30.70.270 217 390 1.5E-53 T 11-10-2018 IX88_05785 824c87049403c03beb3130fab279785f 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 102 18.295 T 11-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 IX88_05785 824c87049403c03beb3130fab279785f 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 10 96 7.2E-23 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like IX88_04875 0f6450f0866b023693da2f0345c69f3f 468 Gene3D G3DSA:1.20.1600.10 59 460 2.4E-106 T 11-10-2018 IX88_04875 0f6450f0866b023693da2f0345c69f3f 468 SUPERFAMILY SSF56954 3 461 2.35E-92 T 11-10-2018 IX88_04875 0f6450f0866b023693da2f0345c69f3f 468 Pfam PF02321 Outer membrane efflux protein 68 251 1.5E-20 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IX88_04875 0f6450f0866b023693da2f0345c69f3f 468 Pfam PF02321 Outer membrane efflux protein 281 459 2.6E-25 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IX88_04875 0f6450f0866b023693da2f0345c69f3f 468 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 17 460 3.9E-86 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 IX88_04875 0f6450f0866b023693da2f0345c69f3f 468 Gene3D G3DSA:2.20.200.10 105 350 2.4E-106 T 11-10-2018 IX88_16575 1bd9db534a48a449f0b04fbce81d9660 631 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 193 325 4.8E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IX88_16575 1bd9db534a48a449f0b04fbce81d9660 631 Pfam PF01434 Peptidase family M41 387 593 2.5E-78 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 IX88_16575 1bd9db534a48a449f0b04fbce81d9660 631 Gene3D G3DSA:3.40.50.300 141 327 1.6E-70 T 11-10-2018 IX88_16575 1bd9db534a48a449f0b04fbce81d9660 631 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 103 594 1.6E-232 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 IX88_16575 1bd9db534a48a449f0b04fbce81d9660 631 Gene3D G3DSA:1.20.58.760 402 600 2.2E-72 T 11-10-2018 IX88_16575 1bd9db534a48a449f0b04fbce81d9660 631 SUPERFAMILY SSF140990 407 602 2.09E-74 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 IX88_16575 1bd9db534a48a449f0b04fbce81d9660 631 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 197 216 5.2E-5 T 11-10-2018 IX88_16575 1bd9db534a48a449f0b04fbce81d9660 631 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 616 631 5.2E-5 T 11-10-2018 IX88_16575 1bd9db534a48a449f0b04fbce81d9660 631 Gene3D G3DSA:1.10.8.60 328 401 1.1E-26 T 11-10-2018 IX88_16575 1bd9db534a48a449f0b04fbce81d9660 631 ProSitePatterns PS00674 AAA-protein family signature. 296 314 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 IX88_16575 1bd9db534a48a449f0b04fbce81d9660 631 Pfam PF06480 FtsH Extracellular 9 71 9.9E-9 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 IX88_16575 1bd9db534a48a449f0b04fbce81d9660 631 SMART SM00382 189 328 1.2E-25 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_16575 1bd9db534a48a449f0b04fbce81d9660 631 Gene3D G3DSA:2.40.50.920 25 101 1.4E-12 T 11-10-2018 IX88_16575 1bd9db534a48a449f0b04fbce81d9660 631 SUPERFAMILY SSF52540 147 396 2.63E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_16575 1bd9db534a48a449f0b04fbce81d9660 631 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 609 36.568 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 IX88_03735 a5469346548da2726ba8183afb4e7813 234 SUPERFAMILY SSF53098 72 191 1.21E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_03735 a5469346548da2726ba8183afb4e7813 234 Pfam PF13610 DDE domain 73 212 3.3E-50 T 11-10-2018 IPR032874 DDE domain IX88_00170 30754b50b4a1c114facd78fddb6cd26e 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-16 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00170 30754b50b4a1c114facd78fddb6cd26e 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-16 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00170 30754b50b4a1c114facd78fddb6cd26e 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-16 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00170 30754b50b4a1c114facd78fddb6cd26e 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.255 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00170 30754b50b4a1c114facd78fddb6cd26e 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 6.9E-36 T 11-10-2018 IPR027486 Ribosomal protein S10 domain IX88_00170 30754b50b4a1c114facd78fddb6cd26e 103 SMART SM01403 7 101 4.5E-55 T 11-10-2018 IPR027486 Ribosomal protein S10 domain IX88_00170 30754b50b4a1c114facd78fddb6cd26e 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 7.9E-45 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00170 30754b50b4a1c114facd78fddb6cd26e 103 SUPERFAMILY SSF54999 5 101 1.31E-36 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily IX88_00170 30754b50b4a1c114facd78fddb6cd26e 103 Gene3D G3DSA:3.30.70.600 1 103 7.2E-37 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily IX88_00170 30754b50b4a1c114facd78fddb6cd26e 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_03700 da81481e9e9010a583019d7e5b20aefd 267 Pfam PF01636 Phosphotransferase enzyme family 17 258 1.2E-29 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase IX88_03700 da81481e9e9010a583019d7e5b20aefd 267 Gene3D G3DSA:3.30.200.20 8 83 2.0E-16 T 11-10-2018 IX88_03700 da81481e9e9010a583019d7e5b20aefd 267 Gene3D G3DSA:3.90.1200.10 84 264 4.5E-53 T 11-10-2018 IX88_03700 da81481e9e9010a583019d7e5b20aefd 267 SUPERFAMILY SSF56112 6 263 1.9E-42 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily IX88_03700 da81481e9e9010a583019d7e5b20aefd 267 PIRSF PIRSF000706 2 265 9.2E-81 T 11-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 IX88_17710 320a5577420e84ade3b230b516c177bb 422 SUPERFAMILY SSF47384 161 246 2.16E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IX88_17710 320a5577420e84ade3b230b516c177bb 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 401 2.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_17710 320a5577420e84ade3b230b516c177bb 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 343 2.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_17710 320a5577420e84ade3b230b516c177bb 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 382 2.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_17710 320a5577420e84ade3b230b516c177bb 422 SUPERFAMILY SSF55874 235 402 9.43E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_17710 320a5577420e84ade3b230b516c177bb 422 SMART SM00387 290 404 2.7E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_17710 320a5577420e84ade3b230b516c177bb 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 402 1.1E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_17710 320a5577420e84ade3b230b516c177bb 422 Gene3D G3DSA:1.10.287.130 149 243 2.4E-12 T 11-10-2018 IX88_17710 320a5577420e84ade3b230b516c177bb 422 Pfam PF00512 His Kinase A (phospho-acceptor) domain 177 245 2.0E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_17710 320a5577420e84ade3b230b516c177bb 422 SMART SM00388 177 245 1.3E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_17710 320a5577420e84ade3b230b516c177bb 422 Gene3D G3DSA:3.30.565.10 252 410 1.2E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_15870 fae96cacf5afb4d86bbcca24a85600ac 294 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 26 284 1.5E-127 T 11-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 IX88_15870 fae96cacf5afb4d86bbcca24a85600ac 294 SUPERFAMILY SSF161098 25 280 2.88E-55 T 11-10-2018 IPR035906 MetI-like superfamily IX88_15870 fae96cacf5afb4d86bbcca24a85600ac 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 280 3.6E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_15870 fae96cacf5afb4d86bbcca24a85600ac 294 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 23 281 1.9E-98 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 IX88_15870 fae96cacf5afb4d86bbcca24a85600ac 294 Gene3D G3DSA:1.10.3720.10 27 285 8.1E-62 T 11-10-2018 IPR035906 MetI-like superfamily IX88_02260 4d4fad06f50ce3b0e5aa977ebb1ea9ef 441 Gene3D G3DSA:2.30.40.10 10 429 9.0E-200 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 IX88_02260 4d4fad06f50ce3b0e5aa977ebb1ea9ef 441 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 32 431 9.9E-193 T 11-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 IX88_02260 4d4fad06f50ce3b0e5aa977ebb1ea9ef 441 SUPERFAMILY SSF51556 75 378 1.84E-104 T 11-10-2018 IPR032466 Metal-dependent hydrolase IX88_02260 4d4fad06f50ce3b0e5aa977ebb1ea9ef 441 Pfam PF01979 Amidohydrolase family 73 432 3.4E-76 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 IX88_02260 4d4fad06f50ce3b0e5aa977ebb1ea9ef 441 Gene3D G3DSA:3.20.20.140 76 393 9.0E-200 T 11-10-2018 IX88_02260 4d4fad06f50ce3b0e5aa977ebb1ea9ef 441 SUPERFAMILY SSF51338 32 90 1.15E-7 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 IX88_12895 16e7c59434c7a99875aea4a2535216e5 718 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 701 718 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site IX88_12895 16e7c59434c7a99875aea4a2535216e5 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 170 2.9E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_12895 16e7c59434c7a99875aea4a2535216e5 718 SUPERFAMILY SSF56935 35 718 7.33E-121 T 11-10-2018 IX88_12895 16e7c59434c7a99875aea4a2535216e5 718 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 718 9.6E-108 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 IX88_12895 16e7c59434c7a99875aea4a2535216e5 718 Pfam PF00593 TonB dependent receptor 259 717 6.9E-49 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_12895 16e7c59434c7a99875aea4a2535216e5 718 Gene3D G3DSA:2.170.130.10 48 179 3.3E-36 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_12895 16e7c59434c7a99875aea4a2535216e5 718 Gene3D G3DSA:2.40.170.20 182 718 2.9E-161 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IX88_01185 bd0940a00e60e2f313ae2b17095b6438 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_01185 bd0940a00e60e2f313ae2b17095b6438 430 Gene3D G3DSA:3.90.1150.10 9 411 1.2E-148 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_01185 bd0940a00e60e2f313ae2b17095b6438 430 SUPERFAMILY SSF53383 26 415 2.5E-124 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_01185 bd0940a00e60e2f313ae2b17095b6438 430 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 11 415 1.2E-173 T 11-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 IX88_01185 bd0940a00e60e2f313ae2b17095b6438 430 Gene3D G3DSA:3.40.640.10 60 319 1.2E-148 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_01185 bd0940a00e60e2f313ae2b17095b6438 430 PIRSF PIRSF000521 3 131 0.0021 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_01185 bd0940a00e60e2f313ae2b17095b6438 430 PIRSF PIRSF000521 125 418 8.8E-46 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_01185 bd0940a00e60e2f313ae2b17095b6438 430 Pfam PF00202 Aminotransferase class-III 26 413 5.4E-124 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_02170 e11a165add1142c2de023ab3752a415f 643 SUPERFAMILY SSF52540 293 518 1.59E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_02170 e11a165add1142c2de023ab3752a415f 643 Gene3D G3DSA:3.40.50.300 1 258 7.7E-55 T 11-10-2018 IX88_02170 e11a165add1142c2de023ab3752a415f 643 Gene3D G3DSA:3.40.50.300 274 540 8.4E-55 T 11-10-2018 IX88_02170 e11a165add1142c2de023ab3752a415f 643 SMART SM00382 26 222 2.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_02170 e11a165add1142c2de023ab3752a415f 643 SMART SM00382 336 503 1.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_02170 e11a165add1142c2de023ab3752a415f 643 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_02170 e11a165add1142c2de023ab3752a415f 643 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_02170 e11a165add1142c2de023ab3752a415f 643 SUPERFAMILY SSF52540 2 253 9.11E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_02170 e11a165add1142c2de023ab3752a415f 643 Pfam PF00005 ABC transporter 18 177 1.9E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_02170 e11a165add1142c2de023ab3752a415f 643 Pfam PF12848 ABC transporter 216 294 1.7E-29 T 11-10-2018 IPR032781 ABC-transporter extension domain IX88_02170 e11a165add1142c2de023ab3752a415f 643 Pfam PF00005 ABC transporter 329 459 7.5E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_15240 af15f4c211993c6dd80c1aa3908bef64 697 SUPERFAMILY SSF47336 188 257 1.96E-12 T 11-10-2018 IPR036736 ACP-like superfamily IX88_15240 af15f4c211993c6dd80c1aa3908bef64 697 SUPERFAMILY SSF52777 454 697 4.34E-36 T 11-10-2018 IX88_15240 af15f4c211993c6dd80c1aa3908bef64 697 Gene3D G3DSA:3.40.50.1820 181 281 9.4E-14 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_15240 af15f4c211993c6dd80c1aa3908bef64 697 Pfam PF00550 Phosphopantetheine attachment site 204 257 4.8E-10 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain IX88_15240 af15f4c211993c6dd80c1aa3908bef64 697 SUPERFAMILY SSF52777 278 449 2.89E-35 T 11-10-2018 IX88_15240 af15f4c211993c6dd80c1aa3908bef64 697 SUPERFAMILY SSF52777 15 166 1.0E-9 T 11-10-2018 IX88_15240 af15f4c211993c6dd80c1aa3908bef64 697 ProSitePatterns PS00012 Phosphopantetheine attachment site. 217 232 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site IX88_15240 af15f4c211993c6dd80c1aa3908bef64 697 Pfam PF00668 Condensation domain 274 697 1.6E-57 T 11-10-2018 IPR001242 Condensation domain IX88_15240 af15f4c211993c6dd80c1aa3908bef64 697 Gene3D G3DSA:3.30.559.30 453 697 4.6E-74 T 11-10-2018 IX88_15240 af15f4c211993c6dd80c1aa3908bef64 697 Gene3D G3DSA:3.30.559.10 282 645 4.6E-74 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 IX88_09155 751df1abab17c74343479239953c2b4d 488 Gene3D G3DSA:1.20.1250.20 33 464 3.0E-63 T 11-10-2018 IX88_09155 751df1abab17c74343479239953c2b4d 488 SUPERFAMILY SSF103473 17 474 8.63E-60 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_09155 751df1abab17c74343479239953c2b4d 488 Pfam PF00083 Sugar (and other) transporter 55 456 3.5E-38 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 IX88_02055 3e937f4f011b8781c6725763f1e90ae7 296 Pfam PF03466 LysR substrate binding domain 91 294 2.5E-31 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_02055 3e937f4f011b8781c6725763f1e90ae7 296 Gene3D G3DSA:3.40.190.290 94 295 2.2E-33 T 11-10-2018 IX88_02055 3e937f4f011b8781c6725763f1e90ae7 296 Gene3D G3DSA:1.10.10.10 4 89 7.9E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_02055 3e937f4f011b8781c6725763f1e90ae7 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.2E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_02055 3e937f4f011b8781c6725763f1e90ae7 296 SUPERFAMILY SSF53850 94 294 1.63E-32 T 11-10-2018 IX88_02055 3e937f4f011b8781c6725763f1e90ae7 296 SUPERFAMILY SSF46785 1 113 1.03E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_06415 1da2001e031250a15798606714943651 302 SUPERFAMILY SSF53633 9 296 2.75E-93 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily IX88_06415 1da2001e031250a15798606714943651 302 Gene3D G3DSA:3.40.1160.10 7 299 3.3E-99 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily IX88_06415 1da2001e031250a15798606714943651 302 PIRSF PIRSF000728 13 296 3.3E-109 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 IX88_06415 1da2001e031250a15798606714943651 302 Pfam PF00696 Amino acid kinase family 28 273 1.3E-45 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 IX88_06415 1da2001e031250a15798606714943651 302 TIGRFAM TIGR00761 argB: acetylglutamate kinase 29 271 2.3E-80 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 IX88_06415 1da2001e031250a15798606714943651 302 Hamap MF_00082 Acetylglutamate kinase [argB]. 27 289 50.48 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 IX88_15155 bec57cfa75a0870ae90d8f6a14885e55 415 Gene3D G3DSA:2.40.440.10 224 415 3.2E-43 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like IX88_15155 bec57cfa75a0870ae90d8f6a14885e55 415 Pfam PF01471 Putative peptidoglycan binding domain 147 192 3.1E-9 T 11-10-2018 IPR002477 Peptidoglycan binding-like IX88_15155 bec57cfa75a0870ae90d8f6a14885e55 415 Pfam PF03734 L,D-transpeptidase catalytic domain 283 410 2.9E-18 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 IX88_15155 bec57cfa75a0870ae90d8f6a14885e55 415 SUPERFAMILY SSF47090 145 195 1.37E-11 T 11-10-2018 IPR036365 PGBD-like superfamily IX88_15155 bec57cfa75a0870ae90d8f6a14885e55 415 SUPERFAMILY SSF141523 283 411 4.84E-27 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like IX88_15155 bec57cfa75a0870ae90d8f6a14885e55 415 Gene3D G3DSA:1.10.101.10 141 203 5.4E-10 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 IX88_11325 4e25a4e301119ad5cf8184de4e37bb2d 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 2.1E-11 T 11-10-2018 IX88_11325 4e25a4e301119ad5cf8184de4e37bb2d 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 2.1E-11 T 11-10-2018 IX88_11325 4e25a4e301119ad5cf8184de4e37bb2d 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.1E-11 T 11-10-2018 IX88_11325 4e25a4e301119ad5cf8184de4e37bb2d 401 Gene3D G3DSA:3.50.50.100 1 382 1.3E-76 T 11-10-2018 IX88_11325 4e25a4e301119ad5cf8184de4e37bb2d 401 SUPERFAMILY SSF51905 1 328 1.09E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_11325 4e25a4e301119ad5cf8184de4e37bb2d 401 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 313 5.2E-43 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_05090 a006722acda4e13ee5262043282b433e 272 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 47 253 4.2E-73 T 11-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like IX88_05090 a006722acda4e13ee5262043282b433e 272 Gene3D G3DSA:3.30.420.10 5 213 1.1E-19 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IX88_05090 a006722acda4e13ee5262043282b433e 272 SUPERFAMILY SSF53098 4 221 4.18E-34 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_12170 9e1b9585ee85f5e9f76ef493389f48b5 122 SUPERFAMILY SSF75169 1 122 2.36E-29 T 11-10-2018 IPR027396 DsrEFH-like IX88_12170 9e1b9585ee85f5e9f76ef493389f48b5 122 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 3 122 1.3E-35 T 11-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 IX88_12170 9e1b9585ee85f5e9f76ef493389f48b5 122 Pfam PF02635 DsrE/DsrF-like family 1 122 1.5E-21 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein IX88_12170 9e1b9585ee85f5e9f76ef493389f48b5 122 Gene3D G3DSA:3.40.1260.10 1 122 3.9E-36 T 11-10-2018 IPR027396 DsrEFH-like IX88_15445 729adf30adc70cefdc9d04902b9e737a 573 SUPERFAMILY SSF52518 359 541 1.06E-42 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_15445 729adf30adc70cefdc9d04902b9e737a 573 PIRSF PIRSF036565 1 549 2.0E-193 T 11-10-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 IX88_15445 729adf30adc70cefdc9d04902b9e737a 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 IX88_15445 729adf30adc70cefdc9d04902b9e737a 573 SUPERFAMILY SSF52518 5 179 5.89E-39 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_15445 729adf30adc70cefdc9d04902b9e737a 573 Gene3D G3DSA:3.40.50.970 1 180 1.0E-70 T 11-10-2018 IX88_15445 729adf30adc70cefdc9d04902b9e737a 573 Gene3D G3DSA:3.40.50.970 350 543 3.1E-58 T 11-10-2018 IX88_15445 729adf30adc70cefdc9d04902b9e737a 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 526 3.8E-19 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 IX88_15445 729adf30adc70cefdc9d04902b9e737a 573 Gene3D G3DSA:3.40.50.1220 188 345 4.2E-38 T 11-10-2018 IX88_15445 729adf30adc70cefdc9d04902b9e737a 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 307 8.0E-19 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 IX88_15445 729adf30adc70cefdc9d04902b9e737a 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 175 4.5E-32 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 IX88_15445 729adf30adc70cefdc9d04902b9e737a 573 SUPERFAMILY SSF52467 180 339 2.45E-26 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily IX88_05610 6cdccded34176e8d281131eab1c416fa 436 SUPERFAMILY SSF103473 12 423 7.32E-70 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_05610 6cdccded34176e8d281131eab1c416fa 436 Pfam PF07690 Major Facilitator Superfamily 20 374 3.5E-33 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_05610 6cdccded34176e8d281131eab1c416fa 436 Gene3D G3DSA:1.20.1250.20 12 433 6.4E-68 T 11-10-2018 IX88_05610 6cdccded34176e8d281131eab1c416fa 436 ProSitePatterns PS00216 Sugar transport proteins signature 1. 291 308 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_05610 6cdccded34176e8d281131eab1c416fa 436 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_05610 6cdccded34176e8d281131eab1c416fa 436 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 89 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_03185 0515b091e85aea9403def9801cffa77f 332 SUPERFAMILY SSF53686 18 325 2.75E-97 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IX88_03185 0515b091e85aea9403def9801cffa77f 332 TIGRFAM TIGR01139 cysK: cysteine synthase A 22 326 2.1E-132 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 IX88_03185 0515b091e85aea9403def9801cffa77f 332 TIGRFAM TIGR01136 cysKM: cysteine synthase 22 326 3.3E-127 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 IX88_03185 0515b091e85aea9403def9801cffa77f 332 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 315 6.4E-65 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme IX88_03185 0515b091e85aea9403def9801cffa77f 332 Gene3D G3DSA:3.40.50.1100 25 321 1.3E-122 T 11-10-2018 IX88_03185 0515b091e85aea9403def9801cffa77f 332 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 46 64 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 IX88_03185 0515b091e85aea9403def9801cffa77f 332 Gene3D G3DSA:3.40.50.1100 58 160 1.3E-122 T 11-10-2018 IX88_09405 99406f0fe1612b931a2cd4cb56448f96 254 Gene3D G3DSA:3.40.30.10 1 103 1.8E-15 T 11-10-2018 IX88_09405 99406f0fe1612b931a2cd4cb56448f96 254 SUPERFAMILY SSF47616 134 207 3.62E-8 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IX88_09405 99406f0fe1612b931a2cd4cb56448f96 254 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 8.2E-17 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 IX88_09405 99406f0fe1612b931a2cd4cb56448f96 254 Pfam PF14497 Glutathione S-transferase, C-terminal domain 138 204 8.7E-6 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal IX88_09405 99406f0fe1612b931a2cd4cb56448f96 254 Gene3D G3DSA:1.20.1050.10 116 214 2.6E-7 T 11-10-2018 IX88_09405 99406f0fe1612b931a2cd4cb56448f96 254 SUPERFAMILY SSF52833 2 99 3.52E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_17310 c992c65f78506e9b6ed5d3421f04c6cb 236 Gene3D G3DSA:3.10.450.70 18 83 4.1E-12 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 IX88_17310 c992c65f78506e9b6ed5d3421f04c6cb 236 SUPERFAMILY SSF54423 29 81 8.83E-14 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 IX88_17310 c992c65f78506e9b6ed5d3421f04c6cb 236 SUPERFAMILY SSF52833 88 234 2.65E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_17310 c992c65f78506e9b6ed5d3421f04c6cb 236 Pfam PF10411 Disulfide bond isomerase protein N-terminus 26 78 5.3E-17 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal IX88_17310 c992c65f78506e9b6ed5d3421f04c6cb 236 Gene3D G3DSA:3.40.30.10 98 235 1.8E-39 T 11-10-2018 IX88_17310 c992c65f78506e9b6ed5d3421f04c6cb 236 Pfam PF13098 Thioredoxin-like domain 108 232 2.3E-30 T 11-10-2018 IPR012336 Thioredoxin-like fold IX88_14340 894830744ae72c5719f1031d9578174f 261 Gene3D G3DSA:3.20.20.70 1 259 3.3E-118 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_14340 894830744ae72c5719f1031d9578174f 261 Hamap MF_00443 Thiazole synthase [thiG]. 5 260 41.759 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 IX88_14340 894830744ae72c5719f1031d9578174f 261 Pfam PF05690 Thiazole biosynthesis protein ThiG 8 254 4.2E-108 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 IX88_14340 894830744ae72c5719f1031d9578174f 261 SUPERFAMILY SSF110399 5 246 2.09E-88 T 11-10-2018 IX88_09515 3ee450ea28e1abd964dec15d663ecf75 283 Pfam PF03466 LysR substrate binding domain 88 276 8.4E-26 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_09515 3ee450ea28e1abd964dec15d663ecf75 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.2E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_09515 3ee450ea28e1abd964dec15d663ecf75 283 Gene3D G3DSA:3.40.190.290 92 277 1.4E-29 T 11-10-2018 IX88_09515 3ee450ea28e1abd964dec15d663ecf75 283 SUPERFAMILY SSF46785 1 112 2.9E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_09515 3ee450ea28e1abd964dec15d663ecf75 283 SUPERFAMILY SSF53850 88 281 2.71E-30 T 11-10-2018 IX88_09515 3ee450ea28e1abd964dec15d663ecf75 283 Gene3D G3DSA:1.10.10.10 2 91 6.5E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_09750 4a2bfe2ed6e7dbc698a1236b49363135 436 SUPERFAMILY SSF54534 182 275 3.73E-11 T 11-10-2018 IX88_09750 4a2bfe2ed6e7dbc698a1236b49363135 436 Pfam PF13616 PPIC-type PPIASE domain 281 383 7.0E-32 T 11-10-2018 IX88_09750 4a2bfe2ed6e7dbc698a1236b49363135 436 Gene3D G3DSA:3.10.50.40 179 274 6.6E-45 T 11-10-2018 IX88_09750 4a2bfe2ed6e7dbc698a1236b49363135 436 Hamap MF_01183 Chaperone SurA [surA]. 13 427 25.446 T 11-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 IX88_09750 4a2bfe2ed6e7dbc698a1236b49363135 436 Pfam PF09312 SurA N-terminal domain 31 149 3.5E-23 T 11-10-2018 IPR015391 SurA N-terminal IX88_09750 4a2bfe2ed6e7dbc698a1236b49363135 436 Gene3D G3DSA:1.10.4030.30 31 278 6.6E-45 T 11-10-2018 IX88_09750 4a2bfe2ed6e7dbc698a1236b49363135 436 Gene3D G3DSA:3.10.50.40 279 419 2.1E-43 T 11-10-2018 IX88_09750 4a2bfe2ed6e7dbc698a1236b49363135 436 SUPERFAMILY SSF109998 31 192 1.09E-26 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily IX88_09750 4a2bfe2ed6e7dbc698a1236b49363135 436 SUPERFAMILY SSF54534 283 384 4.25E-33 T 11-10-2018 IX88_09750 4a2bfe2ed6e7dbc698a1236b49363135 436 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 320 341 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 IX88_09750 4a2bfe2ed6e7dbc698a1236b49363135 436 Pfam PF00639 PPIC-type PPIASE domain 190 270 1.1E-5 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 IX88_14515 0323db0667b34a27a0896c7d73b860d3 482 Gene3D G3DSA:2.20.200.10 111 368 2.4E-131 T 11-10-2018 IX88_14515 0323db0667b34a27a0896c7d73b860d3 482 Gene3D G3DSA:1.20.1600.10 64 480 2.4E-131 T 11-10-2018 IX88_14515 0323db0667b34a27a0896c7d73b860d3 482 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 479 4.1E-123 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 IX88_14515 0323db0667b34a27a0896c7d73b860d3 482 SUPERFAMILY SSF56954 7 480 7.98E-108 T 11-10-2018 IX88_14515 0323db0667b34a27a0896c7d73b860d3 482 Pfam PF02321 Outer membrane efflux protein 74 266 1.2E-25 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IX88_14515 0323db0667b34a27a0896c7d73b860d3 482 Pfam PF02321 Outer membrane efflux protein 290 477 8.8E-26 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IX88_15830 c92d07a6c993b8c5708259a752314857 549 SUPERFAMILY SSF46977 428 527 1.83E-31 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_15830 c92d07a6c993b8c5708259a752314857 549 SUPERFAMILY SSF51905 5 449 1.45E-66 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_15830 c92d07a6c993b8c5708259a752314857 549 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 13 522 1.7E-190 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 IX88_15830 c92d07a6c993b8c5708259a752314857 549 Gene3D G3DSA:3.90.700.10 250 360 2.4E-148 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_15830 c92d07a6c993b8c5708259a752314857 549 Pfam PF00890 FAD binding domain 15 394 5.9E-91 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_15830 c92d07a6c993b8c5708259a752314857 549 PIRSF PIRSF000171 339 537 2.4E-15 T 11-10-2018 IX88_15830 c92d07a6c993b8c5708259a752314857 549 PIRSF PIRSF000171 4 290 1.8E-18 T 11-10-2018 IX88_15830 c92d07a6c993b8c5708259a752314857 549 Gene3D G3DSA:1.20.58.100 427 542 5.5E-43 T 11-10-2018 IX88_15830 c92d07a6c993b8c5708259a752314857 549 Gene3D G3DSA:3.50.50.60 15 406 2.4E-148 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_15830 c92d07a6c993b8c5708259a752314857 549 Pfam PF02910 Fumarate reductase flavoprotein C-term 443 523 3.1E-13 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_15830 c92d07a6c993b8c5708259a752314857 549 SUPERFAMILY SSF56425 240 355 6.58E-41 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_15830 c92d07a6c993b8c5708259a752314857 549 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 379 9.1E-8 T 11-10-2018 IX88_15830 c92d07a6c993b8c5708259a752314857 549 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 9.1E-8 T 11-10-2018 IX88_15680 7d033723431fb290083231d8ac0fbf43 424 Pfam PF07759 Protein of unknown function (DUF1615) 74 418 1.8E-118 T 11-10-2018 IPR011673 Protein of unknown function DUF1615 IX88_15680 7d033723431fb290083231d8ac0fbf43 424 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 43 418 5.0E-161 T 11-10-2018 IPR011673 Protein of unknown function DUF1615 IX88_10655 b0dd838785758af7629959c062afb8f7 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.3E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10655 b0dd838785758af7629959c062afb8f7 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.3E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10655 b0dd838785758af7629959c062afb8f7 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 5.3E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10655 b0dd838785758af7629959c062afb8f7 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.3E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10655 b0dd838785758af7629959c062afb8f7 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.3E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10655 b0dd838785758af7629959c062afb8f7 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.3E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10655 b0dd838785758af7629959c062afb8f7 261 Gene3D G3DSA:3.40.50.720 1 261 4.5E-83 T 11-10-2018 IX88_10655 b0dd838785758af7629959c062afb8f7 261 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 8 261 2.4E-110 T 11-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 IX88_10655 b0dd838785758af7629959c062afb8f7 261 SUPERFAMILY SSF51735 6 260 1.16E-85 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_10655 b0dd838785758af7629959c062afb8f7 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_10655 b0dd838785758af7629959c062afb8f7 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 259 1.4E-65 T 11-10-2018 IX88_10655 b0dd838785758af7629959c062afb8f7 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.8E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10655 b0dd838785758af7629959c062afb8f7 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.8E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10655 b0dd838785758af7629959c062afb8f7 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.8E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_16460 406fd436a311f924f77ed349f2931f26 1031 Pfam PF00873 AcrB/AcrD/AcrF family 3 1021 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 SUPERFAMILY SSF82866 828 1021 2.75E-41 T 11-10-2018 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 Gene3D G3DSA:3.30.70.1320 134 333 0.0 T 11-10-2018 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 SUPERFAMILY SSF82693 137 331 6.1E-22 T 11-10-2018 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 SUPERFAMILY SSF82693 39 131 8.2E-26 T 11-10-2018 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 Gene3D G3DSA:3.30.2090.10 718 806 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_16460 406fd436a311f924f77ed349f2931f26 1031 SUPERFAMILY SSF82714 183 273 2.88E-22 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_16460 406fd436a311f924f77ed349f2931f26 1031 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 2.3E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 2.3E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 2.3E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 2.3E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 2.3E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 2.3E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 2.3E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 2.3E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 2.3E-98 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 Gene3D G3DSA:1.20.1640.10 9 509 0.0 T 11-10-2018 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1029 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 Gene3D G3DSA:3.30.70.1430 564 665 0.0 T 11-10-2018 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 Gene3D G3DSA:3.30.70.1430 39 814 0.0 T 11-10-2018 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_16460 406fd436a311f924f77ed349f2931f26 1031 SUPERFAMILY SSF82693 669 844 6.8E-13 T 11-10-2018 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 SUPERFAMILY SSF82693 562 668 1.41E-20 T 11-10-2018 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 SUPERFAMILY SSF82866 297 498 1.7E-49 T 11-10-2018 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 SUPERFAMILY SSF82714 721 804 2.35E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_16460 406fd436a311f924f77ed349f2931f26 1031 Gene3D G3DSA:1.20.1640.10 510 1018 0.0 T 11-10-2018 IX88_16460 406fd436a311f924f77ed349f2931f26 1031 Gene3D G3DSA:3.30.70.1440 666 861 0.0 T 11-10-2018 IX88_08050 8eac6d7d813e9b7f25523ec54c6f8eda 259 Pfam PF10728 Domain of unknown function (DUF2520) 126 250 2.6E-29 T 11-10-2018 IPR018931 Domain of unknown function DUF2520 IX88_08050 8eac6d7d813e9b7f25523ec54c6f8eda 259 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 89 8.8E-12 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal IX88_08050 8eac6d7d813e9b7f25523ec54c6f8eda 259 Gene3D G3DSA:1.10.1040.20 156 256 3.4E-33 T 11-10-2018 IPR037108 TM1727-like, C-terminal domain superfamily IX88_08050 8eac6d7d813e9b7f25523ec54c6f8eda 259 SUPERFAMILY SSF51735 2 157 2.61E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_08050 8eac6d7d813e9b7f25523ec54c6f8eda 259 SUPERFAMILY SSF48179 159 257 1.26E-23 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_08050 8eac6d7d813e9b7f25523ec54c6f8eda 259 Gene3D G3DSA:3.40.50.720 1 155 1.2E-45 T 11-10-2018 IX88_06460 0670b5c243926a10facbbe9db69abfdc 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 11-10-2018 IPR001482 Type II/IV secretion system protein IX88_06460 0670b5c243926a10facbbe9db69abfdc 345 SUPERFAMILY SSF52540 5 334 4.2E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_06460 0670b5c243926a10facbbe9db69abfdc 345 SMART SM00382 122 247 5.8E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_06460 0670b5c243926a10facbbe9db69abfdc 345 Pfam PF00437 Type II/IV secretion system protein 12 269 6.0E-47 T 11-10-2018 IPR001482 Type II/IV secretion system protein IX88_06460 0670b5c243926a10facbbe9db69abfdc 345 Gene3D G3DSA:3.30.450.90 1 100 4.7E-37 T 11-10-2018 IX88_06460 0670b5c243926a10facbbe9db69abfdc 345 Gene3D G3DSA:3.40.50.300 101 345 1.0E-106 T 11-10-2018 IX88_06460 0670b5c243926a10facbbe9db69abfdc 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 9.7E-155 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 IX88_02135 7ffe623ffb157087f6b73d9689037e68 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 164 179 2.1E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 IX88_02135 7ffe623ffb157087f6b73d9689037e68 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 2.1E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 IX88_02135 7ffe623ffb157087f6b73d9689037e68 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 49 71 2.1E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 IX88_02135 7ffe623ffb157087f6b73d9689037e68 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 2.1E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 IX88_02135 7ffe623ffb157087f6b73d9689037e68 404 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 8 401 5.5E-114 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 IX88_02135 7ffe623ffb157087f6b73d9689037e68 404 Gene3D G3DSA:3.40.50.620 7 220 4.5E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_02135 7ffe623ffb157087f6b73d9689037e68 404 Pfam PF00579 tRNA synthetases class I (W and Y) 33 314 1.2E-75 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_02135 7ffe623ffb157087f6b73d9689037e68 404 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 55 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_02135 7ffe623ffb157087f6b73d9689037e68 404 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 5 402 45.495 T 11-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 IX88_02135 7ffe623ffb157087f6b73d9689037e68 404 SUPERFAMILY SSF52374 8 313 2.72E-95 T 11-10-2018 IX88_02135 7ffe623ffb157087f6b73d9689037e68 404 SUPERFAMILY SSF55174 327 402 1.44E-9 T 11-10-2018 IX88_02135 7ffe623ffb157087f6b73d9689037e68 404 Gene3D G3DSA:3.10.290.10 330 402 1.9E-7 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 IX88_02135 7ffe623ffb157087f6b73d9689037e68 404 Gene3D G3DSA:1.10.240.10 221 329 1.3E-29 T 11-10-2018 IX88_03405 f1ea6d489663d7f807458cad178b822c 522 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 417 518 3.8E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_03405 f1ea6d489663d7f807458cad178b822c 522 SUPERFAMILY SSF47384 303 376 7.65E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IX88_03405 f1ea6d489663d7f807458cad178b822c 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 468 1.3E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_03405 f1ea6d489663d7f807458cad178b822c 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 482 1.3E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_03405 f1ea6d489663d7f807458cad178b822c 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 519 1.3E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_03405 f1ea6d489663d7f807458cad178b822c 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 501 1.3E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_03405 f1ea6d489663d7f807458cad178b822c 522 Gene3D G3DSA:3.30.565.10 381 521 4.1E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_03405 f1ea6d489663d7f807458cad178b822c 522 Pfam PF00512 His Kinase A (phospho-acceptor) domain 313 375 7.6E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_03405 f1ea6d489663d7f807458cad178b822c 522 Gene3D G3DSA:3.30.450.20 182 254 1.1E-5 T 11-10-2018 IX88_03405 f1ea6d489663d7f807458cad178b822c 522 SUPERFAMILY SSF55874 392 519 1.44E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_03405 f1ea6d489663d7f807458cad178b822c 522 SUPERFAMILY SSF55785 192 241 1.07E-5 T 11-10-2018 IPR035965 PAS domain superfamily IX88_03405 f1ea6d489663d7f807458cad178b822c 522 Pfam PF00989 PAS fold 203 250 5.9E-5 T 11-10-2018 IPR013767 PAS fold GO:0006355 IX88_03405 f1ea6d489663d7f807458cad178b822c 522 Gene3D G3DSA:1.10.287.130 296 375 8.3E-16 T 11-10-2018 IX88_03405 f1ea6d489663d7f807458cad178b822c 522 SMART SM00388 313 377 8.5E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_03405 f1ea6d489663d7f807458cad178b822c 522 SMART SM00387 416 522 1.2E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_14430 c3c9d2ed44b85e24fba8822dbd5ec158 56 Gene3D G3DSA:2.10.70.10 19 56 8.6E-18 T 11-10-2018 IX88_14430 c3c9d2ed44b85e24fba8822dbd5ec158 56 Pfam PF10636 Hemin uptake protein hemP 21 56 1.4E-16 T 11-10-2018 IPR019600 Hemin uptake protein HemP IX88_07005 159605a06267b03560cce487e72056a0 509 SUPERFAMILY SSF55681 164 505 8.16E-115 T 11-10-2018 IX88_07005 159605a06267b03560cce487e72056a0 509 PRINTS PR00982 Lysyl-tRNA synthetase signature 264 281 5.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IX88_07005 159605a06267b03560cce487e72056a0 509 PRINTS PR00982 Lysyl-tRNA synthetase signature 217 233 5.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IX88_07005 159605a06267b03560cce487e72056a0 509 PRINTS PR00982 Lysyl-tRNA synthetase signature 246 259 5.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IX88_07005 159605a06267b03560cce487e72056a0 509 PRINTS PR00982 Lysyl-tRNA synthetase signature 201 211 5.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IX88_07005 159605a06267b03560cce487e72056a0 509 PRINTS PR00982 Lysyl-tRNA synthetase signature 389 405 5.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IX88_07005 159605a06267b03560cce487e72056a0 509 Pfam PF00152 tRNA synthetases class II (D, K and N) 165 504 4.8E-79 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_07005 159605a06267b03560cce487e72056a0 509 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 20 506 1.3E-197 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IX88_07005 159605a06267b03560cce487e72056a0 509 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 22 507 43.547 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IX88_07005 159605a06267b03560cce487e72056a0 509 Gene3D G3DSA:3.30.930.10 160 509 4.0E-127 T 11-10-2018 IX88_07005 159605a06267b03560cce487e72056a0 509 Gene3D G3DSA:2.40.50.140 8 159 1.0E-32 T 11-10-2018 IX88_07005 159605a06267b03560cce487e72056a0 509 Pfam PF01336 OB-fold nucleic acid binding domain 75 148 2.9E-9 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 IX88_07005 159605a06267b03560cce487e72056a0 509 SUPERFAMILY SSF50249 15 157 3.18E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_03850 c81817a23e35fd75def03d5a72912ae7 264 SUPERFAMILY SSF54637 6 107 6.13E-17 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_03850 c81817a23e35fd75def03d5a72912ae7 264 Gene3D G3DSA:3.10.129.90 8 263 1.2E-59 T 11-10-2018 IX88_03850 c81817a23e35fd75def03d5a72912ae7 264 Pfam PF13622 Thioesterase-like superfamily 19 262 6.0E-40 T 11-10-2018 IX88_03850 c81817a23e35fd75def03d5a72912ae7 264 SUPERFAMILY SSF54637 118 262 2.86E-22 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_11935 644f785fbf85fe23465e2575d743fa2e 154 Gene3D G3DSA:1.10.10.10 3 153 6.1E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_11935 644f785fbf85fe23465e2575d743fa2e 154 Pfam PF01047 MarR family 51 102 1.3E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IX88_11935 644f785fbf85fe23465e2575d743fa2e 154 SMART SM00347 38 138 3.3E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IX88_11935 644f785fbf85fe23465e2575d743fa2e 154 SUPERFAMILY SSF46785 12 153 2.04E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_17005 8802f83c6fca6d3c50902f46784ba384 297 Gene3D G3DSA:1.10.10.60 248 296 5.5E-13 T 11-10-2018 IX88_17005 8802f83c6fca6d3c50902f46784ba384 297 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 183 1.3E-32 T 11-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal IX88_17005 8802f83c6fca6d3c50902f46784ba384 297 SUPERFAMILY SSF46689 198 246 2.94E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_17005 8802f83c6fca6d3c50902f46784ba384 297 Gene3D G3DSA:1.10.10.60 194 247 3.9E-11 T 11-10-2018 IX88_17005 8802f83c6fca6d3c50902f46784ba384 297 SMART SM00342 213 296 3.1E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_17005 8802f83c6fca6d3c50902f46784ba384 297 Pfam PF12833 Helix-turn-helix domain 219 293 7.8E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_17005 8802f83c6fca6d3c50902f46784ba384 297 SUPERFAMILY SSF46689 250 293 8.06E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_17005 8802f83c6fca6d3c50902f46784ba384 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 292 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 IX88_17975 b3440b4ba21738059338f296cc03d58d 385 Gene3D G3DSA:1.20.140.10 234 377 1.4E-39 T 11-10-2018 IX88_17975 b3440b4ba21738059338f296cc03d58d 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 IX88_17975 b3440b4ba21738059338f296cc03d58d 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 118 1.2E-32 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_17975 b3440b4ba21738059338f296cc03d58d 385 SUPERFAMILY SSF56645 3 241 1.05E-75 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_17975 b3440b4ba21738059338f296cc03d58d 385 Gene3D G3DSA:1.10.540.10 1 120 7.4E-39 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_17975 b3440b4ba21738059338f296cc03d58d 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 375 9.7E-40 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_17975 b3440b4ba21738059338f296cc03d58d 385 SUPERFAMILY SSF47203 229 376 1.56E-41 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_17975 b3440b4ba21738059338f296cc03d58d 385 PIRSF PIRSF016578 4 361 5.9E-16 T 11-10-2018 IX88_17975 b3440b4ba21738059338f296cc03d58d 385 Gene3D G3DSA:2.40.110.10 121 233 7.3E-40 T 11-10-2018 IX88_17975 b3440b4ba21738059338f296cc03d58d 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 2.3E-23 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_10465 61a7a9ebbdbe9cde1282623d1c05f955 493 SUPERFAMILY SSF47005 200 243 5.75E-10 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 IX88_10465 61a7a9ebbdbe9cde1282623d1c05f955 493 Gene3D G3DSA:4.10.320.10 204 244 2.8E-12 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 IX88_10465 61a7a9ebbdbe9cde1282623d1c05f955 493 SUPERFAMILY SSF52777 259 492 5.78E-78 T 11-10-2018 IX88_10465 61a7a9ebbdbe9cde1282623d1c05f955 493 SUPERFAMILY SSF47005 135 179 1.09E-9 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 IX88_10465 61a7a9ebbdbe9cde1282623d1c05f955 493 SUPERFAMILY SSF51230 1 77 1.57E-19 T 11-10-2018 IPR011053 Single hybrid motif IX88_10465 61a7a9ebbdbe9cde1282623d1c05f955 493 Pfam PF02817 e3 binding domain 206 241 4.7E-11 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 IX88_10465 61a7a9ebbdbe9cde1282623d1c05f955 493 Pfam PF02817 e3 binding domain 141 175 2.9E-10 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 IX88_10465 61a7a9ebbdbe9cde1282623d1c05f955 493 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 14 43 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 IX88_10465 61a7a9ebbdbe9cde1282623d1c05f955 493 Gene3D G3DSA:4.10.320.10 140 182 2.6E-12 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 IX88_10465 61a7a9ebbdbe9cde1282623d1c05f955 493 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 266 492 7.5E-82 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 IX88_10465 61a7a9ebbdbe9cde1282623d1c05f955 493 Gene3D G3DSA:2.40.50.100 1 88 2.4E-22 T 11-10-2018 IX88_10465 61a7a9ebbdbe9cde1282623d1c05f955 493 Pfam PF00364 Biotin-requiring enzyme 1 62 1.5E-16 T 11-10-2018 IPR000089 Biotin/lipoyl attachment IX88_10465 61a7a9ebbdbe9cde1282623d1c05f955 493 Gene3D G3DSA:3.30.559.10 252 491 1.1E-87 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 IX88_06330 588f8df81840bbcc25f3aa15c0a8cd7c 291 Pfam PF10118 Predicted metal-dependent hydrolase 17 277 2.1E-77 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_06330 588f8df81840bbcc25f3aa15c0a8cd7c 291 PIRSF PIRSF007580 2 290 3.4E-72 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_02160 74eb935cfd63c9a9f88996f940a39d79 335 Gene3D G3DSA:3.40.190.170 53 246 8.4E-10 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily IX88_02160 74eb935cfd63c9a9f88996f940a39d79 335 SUPERFAMILY SSF53850 126 220 5.84E-5 T 11-10-2018 IX88_06905 5df3fa654b45617679abf493a76ea6ce 558 Pfam PF00884 Sulfatase 38 444 1.5E-74 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 IX88_06905 5df3fa654b45617679abf493a76ea6ce 558 ProSitePatterns PS00149 Sulfatases signature 2. 138 148 - T 11-10-2018 IPR024607 Sulfatase, conserved site IX88_06905 5df3fa654b45617679abf493a76ea6ce 558 Gene3D G3DSA:3.40.720.10 35 474 1.5E-130 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 IX88_06905 5df3fa654b45617679abf493a76ea6ce 558 Gene3D G3DSA:3.30.1120.10 481 557 1.6E-15 T 11-10-2018 IX88_06905 5df3fa654b45617679abf493a76ea6ce 558 SUPERFAMILY SSF53649 36 551 2.62E-134 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 IX88_04710 7ed4585e6fdbc6facbde61bc3944a473 714 SUPERFAMILY SSF52540 1 237 1.12E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04710 7ed4585e6fdbc6facbde61bc3944a473 714 Gene3D G3DSA:3.40.50.300 3 196 6.3E-9 T 11-10-2018 IX88_04710 7ed4585e6fdbc6facbde61bc3944a473 714 Gene3D G3DSA:3.40.50.10950 398 707 5.3E-130 T 11-10-2018 IX88_04710 7ed4585e6fdbc6facbde61bc3944a473 714 SUPERFAMILY SSF75138 229 352 5.1E-16 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily IX88_04710 7ed4585e6fdbc6facbde61bc3944a473 714 Gene3D G3DSA:3.40.1390.20 223 366 6.0E-11 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily IX88_04710 7ed4585e6fdbc6facbde61bc3944a473 714 Pfam PF13500 AAA domain 3 227 1.0E-22 T 11-10-2018 IX88_04710 7ed4585e6fdbc6facbde61bc3944a473 714 SUPERFAMILY SSF53659 392 708 4.07E-89 T 11-10-2018 IX88_04710 7ed4585e6fdbc6facbde61bc3944a473 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 405 704 6.4E-127 T 11-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 IX88_04710 7ed4585e6fdbc6facbde61bc3944a473 714 Pfam PF07085 DRTGG domain 233 344 1.5E-19 T 11-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 IX88_04710 7ed4585e6fdbc6facbde61bc3944a473 714 Gene3D G3DSA:3.40.50.10750 527 680 5.3E-130 T 11-10-2018 IX88_04710 7ed4585e6fdbc6facbde61bc3944a473 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 390 704 8.4E-118 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 IX88_04710 7ed4585e6fdbc6facbde61bc3944a473 714 PIRSF PIRSF006107 1 712 0.0 T 11-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 IX88_07085 85286e734fa76ef8e78ce6234afe3365 102 SUPERFAMILY SSF51278 1 102 1.96E-46 T 11-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07085 85286e734fa76ef8e78ce6234afe3365 102 Gene3D G3DSA:2.10.150.10 1 102 3.9E-47 T 11-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07085 85286e734fa76ef8e78ce6234afe3365 102 Pfam PF00699 Urease beta subunit 3 100 2.1E-44 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07085 85286e734fa76ef8e78ce6234afe3365 102 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 31.518 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07085 85286e734fa76ef8e78ce6234afe3365 102 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 102 6.9E-46 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_06305 0d15f5dd20f577926cd1a507a3336ced 124 SUPERFAMILY SSF50249 3 123 9.42E-51 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_06305 0d15f5dd20f577926cd1a507a3336ced 124 PIRSF PIRSF002133 1 124 9.0E-53 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_06305 0d15f5dd20f577926cd1a507a3336ced 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.302 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_06305 0d15f5dd20f577926cd1a507a3336ced 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_06305 0d15f5dd20f577926cd1a507a3336ced 124 Gene3D G3DSA:2.40.50.140 1 124 3.5E-62 T 11-10-2018 IX88_06305 0d15f5dd20f577926cd1a507a3336ced 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.0E-68 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_06305 0d15f5dd20f577926cd1a507a3336ced 124 Pfam PF00164 Ribosomal protein S12/S23 13 123 3.3E-42 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_06305 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.8E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_06305 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.8E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_06305 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.8E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_06305 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.8E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_06305 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.8E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_06305 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.8E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_06685 2cee4753fb87ee179e5e3af18b17b4e7 420 Pfam PF00375 Sodium:dicarboxylate symporter family 9 402 2.3E-102 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 IX88_06685 2cee4753fb87ee179e5e3af18b17b4e7 420 Gene3D G3DSA:1.10.3860.10 1 418 2.1E-116 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IX88_06685 2cee4753fb87ee179e5e3af18b17b4e7 420 SUPERFAMILY SSF118215 9 404 5.1E-112 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IX88_06685 2cee4753fb87ee179e5e3af18b17b4e7 420 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 297 320 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site IX88_06685 2cee4753fb87ee179e5e3af18b17b4e7 420 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site IX88_06685 2cee4753fb87ee179e5e3af18b17b4e7 420 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 4.9E-24 T 11-10-2018 IX88_06685 2cee4753fb87ee179e5e3af18b17b4e7 420 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 4.9E-24 T 11-10-2018 IX88_06685 2cee4753fb87ee179e5e3af18b17b4e7 420 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 4.9E-24 T 11-10-2018 IX88_06685 2cee4753fb87ee179e5e3af18b17b4e7 420 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 4.9E-24 T 11-10-2018 IX88_06685 2cee4753fb87ee179e5e3af18b17b4e7 420 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 4.9E-24 T 11-10-2018 IX88_06685 2cee4753fb87ee179e5e3af18b17b4e7 420 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 4.9E-24 T 11-10-2018 IX88_10200 b0c1caa6216ee9ecb0955a0986f3f4ae 715 SUPERFAMILY SSF48179 520 684 5.1E-16 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_10200 b0c1caa6216ee9ecb0955a0986f3f4ae 715 Gene3D G3DSA:3.40.50.720 247 463 1.8E-10 T 11-10-2018 IX88_10200 b0c1caa6216ee9ecb0955a0986f3f4ae 715 Gene3D G3DSA:3.40.50.1000 12 194 2.4E-45 T 11-10-2018 IPR023214 HAD superfamily IX88_10200 b0c1caa6216ee9ecb0955a0986f3f4ae 715 SUPERFAMILY SSF56784 11 222 6.96E-44 T 11-10-2018 IPR036412 HAD-like superfamily IX88_10200 b0c1caa6216ee9ecb0955a0986f3f4ae 715 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 509 647 1.1E-10 T 11-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 IX88_10200 b0c1caa6216ee9ecb0955a0986f3f4ae 715 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.7E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IX88_10200 b0c1caa6216ee9ecb0955a0986f3f4ae 715 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 1.7E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IX88_10200 b0c1caa6216ee9ecb0955a0986f3f4ae 715 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.7E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IX88_10200 b0c1caa6216ee9ecb0955a0986f3f4ae 715 Gene3D G3DSA:1.10.150.240 22 93 2.4E-45 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IX88_10200 b0c1caa6216ee9ecb0955a0986f3f4ae 715 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 186 5.5E-33 T 11-10-2018 IX88_10200 b0c1caa6216ee9ecb0955a0986f3f4ae 715 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 185 1.5E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IX88_10200 b0c1caa6216ee9ecb0955a0986f3f4ae 715 Gene3D G3DSA:1.10.1040.10 525 690 1.3E-27 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 IX88_00315 14033bd14561542a8b49469c0700dc45 262 SUPERFAMILY SSF53223 2 101 7.48E-31 T 11-10-2018 IX88_00315 14033bd14561542a8b49469c0700dc45 262 Gene3D G3DSA:3.40.50.10860 5 253 1.9E-78 T 11-10-2018 IX88_00315 14033bd14561542a8b49469c0700dc45 262 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 260 29.59 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 IX88_00315 14033bd14561542a8b49469c0700dc45 262 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 259 3.0E-76 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 IX88_00315 14033bd14561542a8b49469c0700dc45 262 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 4.4E-23 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 IX88_00315 14033bd14561542a8b49469c0700dc45 262 SUPERFAMILY SSF51735 102 259 9.16E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_00315 14033bd14561542a8b49469c0700dc45 262 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 113 194 1.5E-13 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase IX88_00315 14033bd14561542a8b49469c0700dc45 262 Gene3D G3DSA:3.40.50.720 115 234 1.9E-78 T 11-10-2018 IX88_09065 adfea2892832da018ea5c3c128b8e353 304 SUPERFAMILY SSF53850 93 303 2.44E-43 T 11-10-2018 IX88_09065 adfea2892832da018ea5c3c128b8e353 304 Gene3D G3DSA:3.40.190.10 165 270 1.3E-58 T 11-10-2018 IX88_09065 adfea2892832da018ea5c3c128b8e353 304 Gene3D G3DSA:1.10.10.10 5 95 2.9E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_09065 adfea2892832da018ea5c3c128b8e353 304 Pfam PF03466 LysR substrate binding domain 92 299 1.2E-39 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_09065 adfea2892832da018ea5c3c128b8e353 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 1.0E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_09065 adfea2892832da018ea5c3c128b8e353 304 Gene3D G3DSA:3.40.190.10 105 296 1.3E-58 T 11-10-2018 IX88_09065 adfea2892832da018ea5c3c128b8e353 304 SUPERFAMILY SSF46785 7 116 6.53E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_09065 adfea2892832da018ea5c3c128b8e353 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_09065 adfea2892832da018ea5c3c128b8e353 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_09065 adfea2892832da018ea5c3c128b8e353 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 25 1362 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 Gene3D G3DSA:1.10.40.90 379 421 2.5E-20 T 11-10-2018 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 Pfam PF05000 RNA polymerase Rpb1, domain 4 679 768 1.5E-19 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 SUPERFAMILY SSF64484 21 1362 0.0 T 11-10-2018 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 Gene3D G3DSA:2.40.50.100 1028 1122 1.1E-18 T 11-10-2018 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 Gene3D G3DSA:1.10.1790.20 1131 1310 1.4E-64 T 11-10-2018 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 Gene3D G3DSA:1.10.150.390 1312 1372 3.3E-27 T 11-10-2018 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 Pfam PF04998 RNA polymerase Rpb1, domain 5 771 1312 1.9E-77 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 Gene3D G3DSA:1.10.132.30 646 795 1.2E-66 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 Pfam PF04983 RNA polymerase Rpb1, domain 3 494 649 5.4E-30 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 SMART SM00663 240 519 3.5E-177 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 Gene3D G3DSA:1.10.274.100 495 645 1.9E-41 T 11-10-2018 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 Gene3D G3DSA:2.40.50.100 1147 1211 1.4E-64 T 11-10-2018 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 Pfam PF04997 RNA polymerase Rpb1, domain 1 21 347 3.6E-88 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 Gene3D G3DSA:2.40.50.100 953 1027 2.8E-26 T 11-10-2018 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 Pfam PF00623 RNA polymerase Rpb1, domain 2 349 389 1.3E-7 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 490 8.4E-27 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_03670 ad77a8db59cffc25115e829f2941c314 1397 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 18 1373 19.098 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_16760 00a3ec0c42b9843bb4e7c22ded6a5b7a 217 SUPERFAMILY SSF55681 11 204 3.07E-63 T 11-10-2018 IX88_16760 00a3ec0c42b9843bb4e7c22ded6a5b7a 217 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 78 131 8.0E-23 T 11-10-2018 IX88_16760 00a3ec0c42b9843bb4e7c22ded6a5b7a 217 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 74 89 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 IX88_16760 00a3ec0c42b9843bb4e7c22ded6a5b7a 217 Pfam PF03099 Biotin/lipoate A/B protein ligase family 66 160 2.7E-9 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 IX88_16760 00a3ec0c42b9843bb4e7c22ded6a5b7a 217 Hamap MF_00013 Octanoyltransferase [lipB]. 7 210 33.727 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 IX88_16760 00a3ec0c42b9843bb4e7c22ded6a5b7a 217 Gene3D G3DSA:3.30.930.10 5 206 8.6E-57 T 11-10-2018 IX88_16760 00a3ec0c42b9843bb4e7c22ded6a5b7a 217 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 30 199 1.9E-57 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 IX88_16760 00a3ec0c42b9843bb4e7c22ded6a5b7a 217 PIRSF PIRSF016262 4 210 3.6E-58 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 IX88_04200 c9ebb2ec86aaaf528406de7d95f52674 338 TIGRFAM TIGR00109 hemH: ferrochelatase 6 328 2.8E-92 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 IX88_04200 c9ebb2ec86aaaf528406de7d95f52674 338 SUPERFAMILY SSF53800 6 333 4.74E-96 T 11-10-2018 IX88_04200 c9ebb2ec86aaaf528406de7d95f52674 338 Gene3D G3DSA:3.40.50.1400 8 329 1.5E-92 T 11-10-2018 IX88_04200 c9ebb2ec86aaaf528406de7d95f52674 338 Hamap MF_00323 Ferrochelatase [hemH]. 7 328 35.385 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 IX88_04200 c9ebb2ec86aaaf528406de7d95f52674 338 Gene3D G3DSA:3.40.50.1400 171 309 1.5E-92 T 11-10-2018 IX88_04200 c9ebb2ec86aaaf528406de7d95f52674 338 ProSitePatterns PS00534 Ferrochelatase signature. 197 216 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 IX88_04200 c9ebb2ec86aaaf528406de7d95f52674 338 Pfam PF00762 Ferrochelatase 8 327 6.3E-102 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 IX88_12120 4a808c63595ea69f2eeea94a8055b21d 306 Gene3D G3DSA:3.40.50.1370 134 295 2.0E-112 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 IX88_12120 4a808c63595ea69f2eeea94a8055b21d 306 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 300 1.4E-116 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 IX88_12120 4a808c63595ea69f2eeea94a8055b21d 306 SUPERFAMILY SSF53671 2 301 3.54E-103 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 IX88_12120 4a808c63595ea69f2eeea94a8055b21d 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 1.9E-30 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 IX88_12120 4a808c63595ea69f2eeea94a8055b21d 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 1.9E-30 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 IX88_12120 4a808c63595ea69f2eeea94a8055b21d 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 1.9E-30 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 IX88_12120 4a808c63595ea69f2eeea94a8055b21d 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 216 226 1.9E-30 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 IX88_12120 4a808c63595ea69f2eeea94a8055b21d 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 278 289 1.9E-30 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 IX88_12120 4a808c63595ea69f2eeea94a8055b21d 306 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 300 79.839 T 11-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 IX88_12120 4a808c63595ea69f2eeea94a8055b21d 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 143 2.0E-49 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 IX88_12120 4a808c63595ea69f2eeea94a8055b21d 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 IX88_12120 4a808c63595ea69f2eeea94a8055b21d 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 287 5.5E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 IX88_12120 4a808c63595ea69f2eeea94a8055b21d 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 5.5E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 IX88_12120 4a808c63595ea69f2eeea94a8055b21d 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 252 261 5.5E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 IX88_12120 4a808c63595ea69f2eeea94a8055b21d 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 5.5E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 IX88_12120 4a808c63595ea69f2eeea94a8055b21d 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 297 1.7E-51 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 IX88_12120 4a808c63595ea69f2eeea94a8055b21d 306 Gene3D G3DSA:3.40.50.1370 4 133 2.0E-112 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 IX88_02465 d90d87bb571d14210cf173dc1ea11d79 322 SMART SM00062 38 254 1.3E-25 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IX88_02465 d90d87bb571d14210cf173dc1ea11d79 322 Gene3D G3DSA:3.40.190.10 118 217 4.5E-107 T 11-10-2018 IX88_02465 d90d87bb571d14210cf173dc1ea11d79 322 Pfam PF09084 NMT1/THI5 like 63 258 3.9E-18 T 11-10-2018 IPR015168 SsuA/THI5-like IX88_02465 d90d87bb571d14210cf173dc1ea11d79 322 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 40 318 5.2E-71 T 11-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 IX88_02465 d90d87bb571d14210cf173dc1ea11d79 322 Gene3D G3DSA:3.40.190.10 39 311 4.5E-107 T 11-10-2018 IX88_02465 d90d87bb571d14210cf173dc1ea11d79 322 Gene3D G3DSA:1.10.8.450 249 281 4.5E-107 T 11-10-2018 IX88_02465 d90d87bb571d14210cf173dc1ea11d79 322 SUPERFAMILY SSF53850 37 268 6.76E-51 T 11-10-2018 IX88_03375 5cc0cf6a8a7e54e285a83024dc2436b2 482 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 169 470 9.4E-120 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 IX88_03375 5cc0cf6a8a7e54e285a83024dc2436b2 482 Gene3D G3DSA:3.40.630.10 166 479 2.8E-133 T 11-10-2018 IX88_03375 5cc0cf6a8a7e54e285a83024dc2436b2 482 SUPERFAMILY SSF53187 163 478 1.98E-121 T 11-10-2018 IX88_03375 5cc0cf6a8a7e54e285a83024dc2436b2 482 Gene3D G3DSA:3.40.220.10 1 165 4.2E-13 T 11-10-2018 IX88_03375 5cc0cf6a8a7e54e285a83024dc2436b2 482 SUPERFAMILY SSF52949 1 163 5.89E-12 T 11-10-2018 IX88_03375 5cc0cf6a8a7e54e285a83024dc2436b2 482 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 38 135 3.0E-9 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 IX88_03375 5cc0cf6a8a7e54e285a83024dc2436b2 482 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 479 34.942 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 IX88_03375 5cc0cf6a8a7e54e285a83024dc2436b2 482 PRINTS PR00481 Cytosol aminopeptidase signature 327 347 2.3E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 IX88_03375 5cc0cf6a8a7e54e285a83024dc2436b2 482 PRINTS PR00481 Cytosol aminopeptidase signature 355 370 2.3E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 IX88_03375 5cc0cf6a8a7e54e285a83024dc2436b2 482 PRINTS PR00481 Cytosol aminopeptidase signature 268 289 2.3E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 IX88_03375 5cc0cf6a8a7e54e285a83024dc2436b2 482 PRINTS PR00481 Cytosol aminopeptidase signature 305 326 2.3E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 IX88_03375 5cc0cf6a8a7e54e285a83024dc2436b2 482 PRINTS PR00481 Cytosol aminopeptidase signature 246 263 2.3E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 IX88_03375 5cc0cf6a8a7e54e285a83024dc2436b2 482 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 331 338 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 IX88_16420 10a9c62cd5383e8c589f7b8ab3dce432 164 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 2.3E-21 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 IX88_16420 10a9c62cd5383e8c589f7b8ab3dce432 164 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 IX88_16420 10a9c62cd5383e8c589f7b8ab3dce432 164 Gene3D G3DSA:3.10.50.30 77 159 7.7E-30 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 IX88_16420 10a9c62cd5383e8c589f7b8ab3dce432 164 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 IX88_16420 10a9c62cd5383e8c589f7b8ab3dce432 164 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 3 158 3.9E-72 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 IX88_16420 10a9c62cd5383e8c589f7b8ab3dce432 164 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 25.864 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 IX88_16420 10a9c62cd5383e8c589f7b8ab3dce432 164 SUPERFAMILY SSF54534 80 156 2.75E-18 T 11-10-2018 IX88_16420 10a9c62cd5383e8c589f7b8ab3dce432 164 Gene3D G3DSA:1.10.287.180 1 76 5.0E-29 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 IX88_16420 10a9c62cd5383e8c589f7b8ab3dce432 164 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 7.2E-24 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 IX88_16420 10a9c62cd5383e8c589f7b8ab3dce432 164 PIRSF PIRSF006092 1 158 1.4E-42 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 IX88_16420 10a9c62cd5383e8c589f7b8ab3dce432 164 SUPERFAMILY SSF46557 3 78 2.09E-25 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 IX88_16420 10a9c62cd5383e8c589f7b8ab3dce432 164 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 49.791 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 IX88_17100 83743fbbfb4c61df346da6189475134b 192 Pfam PF01965 DJ-1/PfpI family 3 184 2.3E-49 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 IX88_17100 83743fbbfb4c61df346da6189475134b 192 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 186 4.0E-52 T 11-10-2018 IPR006286 Deglycase PfpI IX88_17100 83743fbbfb4c61df346da6189475134b 192 Gene3D G3DSA:3.40.50.880 1 192 8.3E-51 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_17100 83743fbbfb4c61df346da6189475134b 192 SUPERFAMILY SSF52317 1 186 9.62E-48 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_12200 c521e5280c918519c7f9a9407e3a8c62 160 SUPERFAMILY SSF46785 6 143 8.92E-42 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_12200 c521e5280c918519c7f9a9407e3a8c62 160 Gene3D G3DSA:1.10.10.10 3 160 4.7E-51 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_12200 c521e5280c918519c7f9a9407e3a8c62 160 Pfam PF01638 HxlR-like helix-turn-helix 19 106 9.0E-23 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type IX88_03115 33dc0b1f5a3b10e9f87d08ca69b484b1 376 SUPERFAMILY SSF102405 89 295 1.68E-41 T 11-10-2018 IX88_03115 33dc0b1f5a3b10e9f87d08ca69b484b1 376 Gene3D G3DSA:3.40.50.450 3 297 1.9E-92 T 11-10-2018 IX88_03115 33dc0b1f5a3b10e9f87d08ca69b484b1 376 Pfam PF02481 DNA recombination-mediator protein A 87 285 2.3E-74 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 IX88_03115 33dc0b1f5a3b10e9f87d08ca69b484b1 376 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 86 295 9.0E-72 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 IX88_06310 66c99aa8d1d8d78ebc5d284ac688565f 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 9.6E-68 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 IX88_06310 66c99aa8d1d8d78ebc5d284ac688565f 156 PIRSF PIRSF002122 3 156 1.9E-58 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 IX88_06310 66c99aa8d1d8d78ebc5d284ac688565f 156 Gene3D G3DSA:1.10.455.10 2 155 1.5E-59 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily IX88_06310 66c99aa8d1d8d78ebc5d284ac688565f 156 SUPERFAMILY SSF47973 6 149 3.27E-59 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily IX88_06310 66c99aa8d1d8d78ebc5d284ac688565f 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.166 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 IX88_06310 66c99aa8d1d8d78ebc5d284ac688565f 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_06310 66c99aa8d1d8d78ebc5d284ac688565f 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.9E-64 T 11-10-2018 IPR023798 Ribosomal protein S7 domain IX88_16655 cca5c9cfe70606d9692e5a119a09b729 500 Pfam PF00999 Sodium/hydrogen exchanger family 16 418 3.5E-35 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 IX88_16655 cca5c9cfe70606d9692e5a119a09b729 500 Gene3D G3DSA:1.20.1530.20 2 416 9.8E-8 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily IX88_04585 a393c18ea72046ff5488d8314fdc5e45 169 PRINTS PR00070 Dihydrofolate reductase signature 103 117 3.5E-15 T 11-10-2018 IX88_04585 a393c18ea72046ff5488d8314fdc5e45 169 PRINTS PR00070 Dihydrofolate reductase signature 19 29 3.5E-15 T 11-10-2018 IX88_04585 a393c18ea72046ff5488d8314fdc5e45 169 PRINTS PR00070 Dihydrofolate reductase signature 33 41 3.5E-15 T 11-10-2018 IX88_04585 a393c18ea72046ff5488d8314fdc5e45 169 PRINTS PR00070 Dihydrofolate reductase signature 46 57 3.5E-15 T 11-10-2018 IX88_04585 a393c18ea72046ff5488d8314fdc5e45 169 Pfam PF00186 Dihydrofolate reductase 8 169 1.2E-54 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 IX88_04585 a393c18ea72046ff5488d8314fdc5e45 169 Gene3D G3DSA:3.40.430.10 6 169 1.5E-51 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 IX88_04585 a393c18ea72046ff5488d8314fdc5e45 169 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 19 41 - T 11-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 IX88_04585 a393c18ea72046ff5488d8314fdc5e45 169 SUPERFAMILY SSF53597 6 169 5.05E-51 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 IX88_04585 a393c18ea72046ff5488d8314fdc5e45 169 PIRSF PIRSF000194 2 169 8.0E-54 T 11-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 IX88_17280 c76e0f28bd326599bac8df6568e287c1 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 4.8E-255 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 IX88_17280 c76e0f28bd326599bac8df6568e287c1 571 SUPERFAMILY SSF55681 10 481 2.11E-105 T 11-10-2018 IX88_17280 c76e0f28bd326599bac8df6568e287c1 571 Gene3D G3DSA:3.40.50.800 4 557 2.7E-238 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily IX88_17280 c76e0f28bd326599bac8df6568e287c1 571 Pfam PF03129 Anticodon binding domain 479 569 5.7E-19 T 11-10-2018 IPR004154 Anticodon-binding IX88_17280 c76e0f28bd326599bac8df6568e287c1 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 462 1.0E-48 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_17280 c76e0f28bd326599bac8df6568e287c1 571 SUPERFAMILY SSF52954 466 570 1.27E-29 T 11-10-2018 IX88_17280 c76e0f28bd326599bac8df6568e287c1 571 Gene3D G3DSA:3.90.960.10 240 392 2.7E-238 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 IX88_17280 c76e0f28bd326599bac8df6568e287c1 571 SUPERFAMILY SSF55826 218 393 1.12E-23 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 IX88_17280 c76e0f28bd326599bac8df6568e287c1 571 PIRSF PIRSF001535 1 571 9.6E-265 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 IX88_17280 c76e0f28bd326599bac8df6568e287c1 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.556 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 IX88_17280 c76e0f28bd326599bac8df6568e287c1 571 Gene3D G3DSA:3.30.930.10 11 468 2.7E-238 T 11-10-2018 IX88_17280 c76e0f28bd326599bac8df6568e287c1 571 Pfam PF04073 Aminoacyl-tRNA editing domain 256 379 1.4E-21 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 IX88_17280 c76e0f28bd326599bac8df6568e287c1 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.7E-18 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 IX88_17280 c76e0f28bd326599bac8df6568e287c1 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.7E-18 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 IX88_17280 c76e0f28bd326599bac8df6568e287c1 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.7E-18 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 IX88_17280 c76e0f28bd326599bac8df6568e287c1 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.7E-18 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 Pfam PF01627 Hpt domain 833 909 7.8E-11 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 Gene3D G3DSA:3.30.565.10 354 528 1.5E-48 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 SMART SM00387 402 523 1.4E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 2.7E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 2.7E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 2.7E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 SUPERFAMILY SSF47384 275 356 1.73E-22 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 SUPERFAMILY SSF47226 769 891 9.94E-18 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 SUPERFAMILY SSF55874 344 518 5.63E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 521 3.7E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 SMART SM00073 823 924 3.9E-4 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 Gene3D G3DSA:1.10.287.130 252 353 7.6E-27 T 11-10-2018 IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 Pfam PF00072 Response regulator receiver domain 665 786 9.2E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 SMART SM00448 663 786 2.5E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 SUPERFAMILY SSF52172 661 830 1.29E-33 T 11-10-2018 IPR011006 CheY-like superfamily IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 Gene3D G3DSA:3.40.50.2300 648 796 3.7E-38 T 11-10-2018 IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 SMART SM00388 289 355 1.8E-23 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 Pfam PF00512 His Kinase A (phospho-acceptor) domain 290 355 4.3E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_05080 f29b4af6143405b60c7d94ba732e1f73 935 Gene3D G3DSA:1.20.120.160 810 932 4.2E-24 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 IX88_17515 4be5a133551d87aceb0a6c8e3ec48746 428 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 423 9.8E-104 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 IX88_17515 4be5a133551d87aceb0a6c8e3ec48746 428 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 51 74 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 IX88_17515 4be5a133551d87aceb0a6c8e3ec48746 428 Pfam PF02875 Mur ligase family, glutamate ligase domain 290 346 2.3E-5 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 IX88_17515 4be5a133551d87aceb0a6c8e3ec48746 428 Pfam PF08245 Mur ligase middle domain 53 267 1.5E-16 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 IX88_17515 4be5a133551d87aceb0a6c8e3ec48746 428 PIRSF PIRSF001563 5 428 6.9E-108 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 IX88_17515 4be5a133551d87aceb0a6c8e3ec48746 428 SUPERFAMILY SSF53623 11 288 1.6E-84 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IX88_17515 4be5a133551d87aceb0a6c8e3ec48746 428 Gene3D G3DSA:3.40.1190.10 2 290 6.4E-90 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IX88_17515 4be5a133551d87aceb0a6c8e3ec48746 428 SUPERFAMILY SSF53244 291 425 6.23E-26 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IX88_17515 4be5a133551d87aceb0a6c8e3ec48746 428 Gene3D G3DSA:3.90.190.20 291 425 3.2E-28 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IX88_15465 38a3337aad10b3a8dfe55623813f99a6 457 Gene3D G3DSA:3.40.640.10 71 338 4.7E-135 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_15465 38a3337aad10b3a8dfe55623813f99a6 457 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 15 455 1.1E-257 T 11-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 IX88_15465 38a3337aad10b3a8dfe55623813f99a6 457 SUPERFAMILY SSF53383 24 448 8.3E-122 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_15465 38a3337aad10b3a8dfe55623813f99a6 457 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_15465 38a3337aad10b3a8dfe55623813f99a6 457 Pfam PF00202 Aminotransferase class-III 34 447 2.1E-96 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_15465 38a3337aad10b3a8dfe55623813f99a6 457 Gene3D G3DSA:3.90.1150.10 23 441 4.7E-135 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_16900 329844b1ca0af122c4494ef9b51d387a 301 Pfam PF03547 Membrane transport protein 154 296 4.9E-11 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 IX88_16900 329844b1ca0af122c4494ef9b51d387a 301 Gene3D G3DSA:1.20.1530.20 156 301 3.7E-8 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily IX88_06200 afb8bac22ea7a7f683d6b345ffe85dca 183 ProSitePatterns PS00201 Flavodoxin signature. 10 26 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 IX88_06200 afb8bac22ea7a7f683d6b345ffe85dca 183 Pfam PF03358 NADPH-dependent FMN reductase 50 121 2.1E-13 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 IX88_06200 afb8bac22ea7a7f683d6b345ffe85dca 183 Gene3D G3DSA:3.40.50.360 4 183 8.8E-50 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_06200 afb8bac22ea7a7f683d6b345ffe85dca 183 SUPERFAMILY SSF52218 7 182 3.67E-46 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_18195 ec598acde057e1a29ac7a0cd6dbf6d76 684 Pfam PF01432 Peptidase family M3 226 675 1.3E-150 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 IX88_18195 ec598acde057e1a29ac7a0cd6dbf6d76 684 Gene3D G3DSA:1.10.1370.10 145 609 3.0E-246 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 IX88_18195 ec598acde057e1a29ac7a0cd6dbf6d76 684 Gene3D G3DSA:1.10.1370.40 17 674 3.0E-246 T 11-10-2018 IX88_18195 ec598acde057e1a29ac7a0cd6dbf6d76 684 SUPERFAMILY SSF55486 14 676 2.72E-189 T 11-10-2018 IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 229 5.0E-92 T 11-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 SUPERFAMILY SSF52402 251 368 1.67E-7 T 11-10-2018 IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 840 858 9.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 865 878 9.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 806 820 9.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 824 834 9.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 Gene3D G3DSA:3.40.50.620 228 370 1.2E-6 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 Pfam PF00512 His Kinase A (phospho-acceptor) domain 657 723 2.2E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 SMART SM00387 768 881 1.7E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 773 880 9.8E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 SUPERFAMILY SSF55874 714 881 3.01E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 Gene3D G3DSA:1.10.287.130 649 723 8.9E-18 T 11-10-2018 IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 SUPERFAMILY SSF52540 21 190 4.0E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 Gene3D G3DSA:3.30.565.10 736 880 2.5E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 SMART SM00388 656 724 1.7E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 Gene3D G3DSA:3.30.450.40 512 648 5.3E-21 T 11-10-2018 IPR029016 GAF-like domain superfamily IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 Pfam PF00582 Universal stress protein family 251 366 6.3E-6 T 11-10-2018 IPR006016 UspA IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 Gene3D G3DSA:1.20.120.620 394 500 1.4E-18 T 11-10-2018 IPR038318 KdpD, transmembrane domain superfamily IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 SUPERFAMILY SSF47384 650 724 3.34E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 Gene3D G3DSA:3.40.50.300 19 227 9.6E-95 T 11-10-2018 IX88_13230 b45f0809c0a5cc12ceab9a1b45afffaa 884 Pfam PF13493 Domain of unknown function (DUF4118) 403 500 2.5E-18 T 11-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain IX88_11535 7ada969d1bd6b65a89dbc8b4809590c8 373 Gene3D G3DSA:3.30.200.20 15 116 7.6E-27 T 11-10-2018 IX88_11535 7ada969d1bd6b65a89dbc8b4809590c8 373 Gene3D G3DSA:3.90.1200.10 122 354 2.0E-62 T 11-10-2018 IX88_11535 7ada969d1bd6b65a89dbc8b4809590c8 373 Pfam PF01636 Phosphotransferase enzyme family 38 265 2.1E-40 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase IX88_11535 7ada969d1bd6b65a89dbc8b4809590c8 373 SUPERFAMILY SSF56112 15 342 1.55E-58 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily IX88_02960 9b36be316086bc68e9d489534bbc5a1e 262 Pfam PF01909 Nucleotidyltransferase domain 12 90 1.9E-6 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 IX88_02960 9b36be316086bc68e9d489534bbc5a1e 262 Pfam PF13427 Domain of unknown function (DUF4111) 147 247 8.7E-20 T 11-10-2018 IPR025184 Domain of unknown function DUF4111 IX88_02960 9b36be316086bc68e9d489534bbc5a1e 262 Gene3D G3DSA:3.30.460.10 4 100 8.5E-8 T 11-10-2018 IX88_02960 9b36be316086bc68e9d489534bbc5a1e 262 SUPERFAMILY SSF81301 10 88 8.0E-11 T 11-10-2018 IX88_07115 bf5cf01a12c05af5ad57d758a643573e 183 Gene3D G3DSA:3.40.50.150 1 183 4.5E-54 T 11-10-2018 IX88_07115 bf5cf01a12c05af5ad57d758a643573e 183 SUPERFAMILY SSF53335 4 179 1.08E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_07115 bf5cf01a12c05af5ad57d758a643573e 183 PIRSF PIRSF004553 4 181 5.9E-46 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 IX88_07115 bf5cf01a12c05af5ad57d758a643573e 183 Pfam PF03602 Conserved hypothetical protein 95 5 179 2.3E-53 T 11-10-2018 IX88_07115 bf5cf01a12c05af5ad57d758a643573e 183 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 IX88_07115 bf5cf01a12c05af5ad57d758a643573e 183 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 3 180 4.6E-50 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 IX88_16665 be2c26f7fa80881ed7c0e68755fc7ad1 307 Pfam PF05661 Protein of unknown function (DUF808) 3 294 3.0E-117 T 11-10-2018 IPR008526 Inner membrane protein YedI IX88_16665 be2c26f7fa80881ed7c0e68755fc7ad1 307 PIRSF PIRSF016660 1 306 7.1E-131 T 11-10-2018 IPR008526 Inner membrane protein YedI IX88_13900 970cf8e0e3a61b518ebe7b4d0a956af9 148 SUPERFAMILY SSF89095 3 147 2.62E-39 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 IX88_13900 970cf8e0e3a61b518ebe7b4d0a956af9 148 Gene3D G3DSA:1.10.1510.10 1 91 2.3E-26 T 11-10-2018 IX88_13900 970cf8e0e3a61b518ebe7b4d0a956af9 148 Pfam PF09424 Yqey-like protein 5 147 2.1E-50 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 IX88_13900 970cf8e0e3a61b518ebe7b4d0a956af9 148 Gene3D G3DSA:1.10.10.410 92 148 3.1E-17 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 Pfam PF13192 Thioredoxin domain 119 194 3.3E-8 T 11-10-2018 IPR012336 Thioredoxin-like fold IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 504 2.2E-46 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 SUPERFAMILY SSF51905 202 514 9.72E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 469 491 7.5E-39 T 11-10-2018 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 7.5E-39 T 11-10-2018 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 7.5E-39 T 11-10-2018 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 7.5E-39 T 11-10-2018 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 7.5E-39 T 11-10-2018 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 SUPERFAMILY SSF52833 1 100 2.12E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 SUPERFAMILY SSF52833 103 195 1.27E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 PIRSF PIRSF000238 1 521 3.6E-257 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 Gene3D G3DSA:3.40.30.80 1 199 3.0E-64 T 11-10-2018 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 518 7.0E-235 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 479 497 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 Gene3D G3DSA:3.50.50.60 327 450 4.7E-109 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_08080 730ef6604b29f56f76a0bbe21c89b7ad 521 Gene3D G3DSA:3.50.50.60 212 509 4.7E-109 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_10430 e24f5b0bebd23facaf8b0376d7fb93f4 363 SUPERFAMILY SSF103263 4 351 3.01E-143 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 IX88_10430 e24f5b0bebd23facaf8b0376d7fb93f4 363 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 36.583 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 IX88_10430 e24f5b0bebd23facaf8b0376d7fb93f4 363 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 IX88_10430 e24f5b0bebd23facaf8b0376d7fb93f4 363 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.1E-135 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 IX88_10430 e24f5b0bebd23facaf8b0376d7fb93f4 363 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 IX88_10430 e24f5b0bebd23facaf8b0376d7fb93f4 363 Pfam PF01264 Chorismate synthase 10 345 1.2E-136 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 IX88_10430 e24f5b0bebd23facaf8b0376d7fb93f4 363 PIRSF PIRSF001456 3 358 1.4E-135 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 IX88_10430 e24f5b0bebd23facaf8b0376d7fb93f4 363 Gene3D G3DSA:3.60.150.10 1 363 8.4E-162 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 IX88_10430 e24f5b0bebd23facaf8b0376d7fb93f4 363 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 IX88_08320 fa0b499243d44f0e14272496b6c77d9c 179 SUPERFAMILY SSF56784 10 171 2.17E-40 T 11-10-2018 IPR036412 HAD-like superfamily IX88_08320 fa0b499243d44f0e14272496b6c77d9c 179 Pfam PF08282 haloacid dehalogenase-like hydrolase 88 145 1.8E-9 T 11-10-2018 IX88_08320 fa0b499243d44f0e14272496b6c77d9c 179 PIRSF PIRSF006118 1 175 7.3E-60 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 IX88_08320 fa0b499243d44f0e14272496b6c77d9c 179 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 14 164 4.2E-47 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 IX88_08320 fa0b499243d44f0e14272496b6c77d9c 179 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 15 127 1.6E-13 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 IX88_08320 fa0b499243d44f0e14272496b6c77d9c 179 Gene3D G3DSA:3.40.50.1000 2 176 8.3E-52 T 11-10-2018 IPR023214 HAD superfamily IX88_06440 e6b825dd53da306905c5a78b4713c358 107 Pfam PF03658 RnfH family Ubiquitin 6 85 2.3E-24 T 11-10-2018 IPR005346 RnfH protein IX88_06440 e6b825dd53da306905c5a78b4713c358 107 SUPERFAMILY SSF54285 6 77 2.62E-19 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp IX88_06440 e6b825dd53da306905c5a78b4713c358 107 Hamap MF_00460 Protein RnfH [rnfH]. 5 93 21.754 T 11-10-2018 IPR005346 RnfH protein IX88_06440 e6b825dd53da306905c5a78b4713c358 107 Gene3D G3DSA:3.10.20.280 1 87 7.2E-25 T 11-10-2018 IPR037021 RnfH superfamily IX88_13540 083499452d12fa20f1ac4dfdfdd25809 455 SUPERFAMILY SSF50952 62 435 2.48E-38 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 IX88_13540 083499452d12fa20f1ac4dfdfdd25809 455 Gene3D G3DSA:2.120.10.30 159 376 6.4E-17 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like IX88_13540 083499452d12fa20f1ac4dfdfdd25809 455 Pfam PF07995 Glucose / Sorbosone dehydrogenase 169 361 1.2E-15 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase IX88_08755 f75057fef6e6d848d2b464fdafb86fd3 217 SUPERFAMILY SSF100950 7 212 2.23E-58 T 11-10-2018 IPR037171 NagB/RpiA transferase-like IX88_08755 f75057fef6e6d848d2b464fdafb86fd3 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 212 8.7E-82 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 IX88_08755 f75057fef6e6d848d2b464fdafb86fd3 217 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 47 55 - T 11-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 IX88_08755 f75057fef6e6d848d2b464fdafb86fd3 217 SMART SM00882 9 206 9.1E-49 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 IX88_08755 f75057fef6e6d848d2b464fdafb86fd3 217 Gene3D G3DSA:3.40.1080.10 3 215 4.9E-79 T 11-10-2018 IX88_08755 f75057fef6e6d848d2b464fdafb86fd3 217 Pfam PF01144 Coenzyme A transferase 9 204 7.0E-36 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 IX88_10295 7d19f779e39bb973a29a0219bfbd61b0 372 Pfam PF12698 ABC-2 family transporter protein 33 364 1.8E-45 T 11-10-2018 IX88_06340 b5062035104f18a85781a09f0e8a51ba 271 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 11 239 39.671 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 IX88_06340 b5062035104f18a85781a09f0e8a51ba 271 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 21 91 8.6E-16 T 11-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 IX88_06340 b5062035104f18a85781a09f0e8a51ba 271 SUPERFAMILY SSF55729 84 243 5.16E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_06340 b5062035104f18a85781a09f0e8a51ba 271 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 113 233 8.2E-39 T 11-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 IX88_06340 b5062035104f18a85781a09f0e8a51ba 271 PIRSF PIRSF037208 4 252 2.8E-97 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 IX88_02920 0c3a7265af0211d9fd3f655f2441b255 130 PIRSF PIRSF005610 1 126 2.8E-8 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB IX88_02920 0c3a7265af0211d9fd3f655f2441b255 130 Pfam PF04247 Invasion gene expression up-regulator, SirB 5 127 5.4E-18 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB IX88_01425 9847ffa2e54765252e89ebdc1d66b6ee 230 SUPERFAMILY SSF51261 78 226 6.8E-54 T 11-10-2018 IPR011055 Duplicated hybrid motif IX88_01425 9847ffa2e54765252e89ebdc1d66b6ee 230 Gene3D G3DSA:2.70.70.10 74 229 4.5E-45 T 11-10-2018 IPR011055 Duplicated hybrid motif IX88_01425 9847ffa2e54765252e89ebdc1d66b6ee 230 Pfam PF01551 Peptidase family M23 128 222 7.9E-32 T 11-10-2018 IPR016047 Peptidase M23 IX88_09910 7e984d298e44aab0c6a5a727f8a60b68 339 SUPERFAMILY SSF46689 291 337 4.93E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_09910 7e984d298e44aab0c6a5a727f8a60b68 339 SMART SM00342 253 335 1.4E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_09910 7e984d298e44aab0c6a5a727f8a60b68 339 Pfam PF12833 Helix-turn-helix domain 262 335 1.2E-14 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_09910 7e984d298e44aab0c6a5a727f8a60b68 339 Gene3D G3DSA:1.10.10.60 231 338 7.3E-19 T 11-10-2018 IX88_09910 7e984d298e44aab0c6a5a727f8a60b68 339 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 19 204 2.1E-14 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal IX88_15735 af4fff47790ac93d0304b7da33c512ba 478 Gene3D G3DSA:3.30.70.270 312 475 1.2E-38 T 11-10-2018 IX88_15735 af4fff47790ac93d0304b7da33c512ba 478 SUPERFAMILY SSF55785 48 150 4.0E-7 T 11-10-2018 IPR035965 PAS domain superfamily IX88_15735 af4fff47790ac93d0304b7da33c512ba 478 SUPERFAMILY SSF55073 327 470 1.44E-30 T 11-10-2018 IPR029787 Nucleotide cyclase IX88_15735 af4fff47790ac93d0304b7da33c512ba 478 Pfam PF13188 PAS domain 200 262 0.072 T 11-10-2018 IPR000014 PAS domain IX88_15735 af4fff47790ac93d0304b7da33c512ba 478 Gene3D G3DSA:3.30.450.20 197 311 2.4E-8 T 11-10-2018 IX88_15735 af4fff47790ac93d0304b7da33c512ba 478 Gene3D G3DSA:3.30.450.20 39 167 2.3E-7 T 11-10-2018 IX88_15735 af4fff47790ac93d0304b7da33c512ba 478 Pfam PF13426 PAS domain 53 149 0.001 T 11-10-2018 IPR000014 PAS domain IX88_15735 af4fff47790ac93d0304b7da33c512ba 478 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 318 470 3.0E-32 T 11-10-2018 IPR000160 GGDEF domain IX88_15735 af4fff47790ac93d0304b7da33c512ba 478 SUPERFAMILY SSF55785 216 318 5.23E-10 T 11-10-2018 IPR035965 PAS domain superfamily IX88_15735 af4fff47790ac93d0304b7da33c512ba 478 Pfam PF00990 Diguanylate cyclase, GGDEF domain 323 470 2.2E-33 T 11-10-2018 IPR000160 GGDEF domain IX88_15735 af4fff47790ac93d0304b7da33c512ba 478 SMART SM00267 311 474 8.4E-35 T 11-10-2018 IPR000160 GGDEF domain IX88_08735 26c0810b3aca6925abb832312c8f9728 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 IX88_08735 26c0810b3aca6925abb832312c8f9728 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 261 2.4E-75 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 IX88_08735 26c0810b3aca6925abb832312c8f9728 262 Gene3D G3DSA:3.90.226.10 9 204 2.2E-69 T 11-10-2018 IX88_08735 26c0810b3aca6925abb832312c8f9728 262 SUPERFAMILY SSF52096 8 261 2.2E-85 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_08735 26c0810b3aca6925abb832312c8f9728 262 Gene3D G3DSA:1.10.12.10 205 261 5.1E-21 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 Gene3D G3DSA:3.50.50.60 15 337 1.0E-88 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 SUPERFAMILY SSF55424 351 467 6.53E-30 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 461 1.5E-26 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 Gene3D G3DSA:3.50.50.60 159 277 1.0E-88 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 2.8E-29 T 11-10-2018 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 2.8E-29 T 11-10-2018 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.8E-29 T 11-10-2018 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 2.8E-29 T 11-10-2018 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 186 204 2.8E-29 T 11-10-2018 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 2.0E-51 T 11-10-2018 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 49 64 2.0E-51 T 11-10-2018 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 159 2.0E-51 T 11-10-2018 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 2.0E-51 T 11-10-2018 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 2.0E-51 T 11-10-2018 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 16 38 2.0E-51 T 11-10-2018 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 186 211 2.0E-51 T 11-10-2018 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 2.0E-51 T 11-10-2018 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 2.0E-51 T 11-10-2018 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 334 1.4E-57 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 Gene3D G3DSA:3.30.390.30 351 469 2.1E-31 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 PIRSF PIRSF000350 3 467 1.0E-65 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 IX88_14640 d51c4ba5e3ed586948255e8eb3bcf4c5 470 SUPERFAMILY SSF51905 13 343 1.81E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_18275 ca856236dc39419630b3c2e5826989ea 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 8.4E-21 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_18275 ca856236dc39419630b3c2e5826989ea 38 Pfam PF00444 Ribosomal protein L36 1 38 2.5E-19 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_18275 ca856236dc39419630b3c2e5826989ea 38 SUPERFAMILY SSF57840 1 38 1.11E-16 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_18275 ca856236dc39419630b3c2e5826989ea 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 4.0E-10 T 11-10-2018 IX88_18275 ca856236dc39419630b3c2e5826989ea 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_18275 ca856236dc39419630b3c2e5826989ea 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.47 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00060 ca856236dc39419630b3c2e5826989ea 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 8.4E-21 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00060 ca856236dc39419630b3c2e5826989ea 38 Pfam PF00444 Ribosomal protein L36 1 38 2.5E-19 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00060 ca856236dc39419630b3c2e5826989ea 38 SUPERFAMILY SSF57840 1 38 1.11E-16 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00060 ca856236dc39419630b3c2e5826989ea 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 4.0E-10 T 11-10-2018 IX88_00060 ca856236dc39419630b3c2e5826989ea 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00060 ca856236dc39419630b3c2e5826989ea 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.47 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_16135 ed3aeecfc7b45a2eca91a4e5920dc13a 264 Gene3D G3DSA:3.20.20.370 2 263 5.4E-31 T 11-10-2018 IX88_16135 ed3aeecfc7b45a2eca91a4e5920dc13a 264 Pfam PF04794 YdjC-like protein 4 250 2.9E-41 T 11-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like IX88_16135 ed3aeecfc7b45a2eca91a4e5920dc13a 264 SUPERFAMILY SSF88713 1 261 8.23E-54 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 IX88_07055 3d373eacb3150cef592b1cfcbfece92a 534 SUPERFAMILY SSF51621 6 514 4.08E-127 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 IX88_07055 3d373eacb3150cef592b1cfcbfece92a 534 PIRSF PIRSF001362 287 409 4.0E-12 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 IX88_07055 3d373eacb3150cef592b1cfcbfece92a 534 PIRSF PIRSF001362 142 275 7.9E-25 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 IX88_07055 3d373eacb3150cef592b1cfcbfece92a 534 PIRSF PIRSF001362 2 148 7.8E-8 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 IX88_07055 3d373eacb3150cef592b1cfcbfece92a 534 PIRSF PIRSF001362 415 534 8.3E-7 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 IX88_07055 3d373eacb3150cef592b1cfcbfece92a 534 Pfam PF00463 Isocitrate lyase family 97 270 8.3E-25 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 IX88_07055 3d373eacb3150cef592b1cfcbfece92a 534 Pfam PF00463 Isocitrate lyase family 316 396 2.1E-11 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 IX88_07055 3d373eacb3150cef592b1cfcbfece92a 534 Pfam PF00463 Isocitrate lyase family 424 521 4.9E-11 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 IX88_07055 3d373eacb3150cef592b1cfcbfece92a 534 Gene3D G3DSA:3.20.20.60 410 532 1.7E-18 T 11-10-2018 IX88_17590 a969b4e58208589a9352af80f3fab5bb 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 223 1.7E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_17590 a969b4e58208589a9352af80f3fab5bb 228 SMART SM00862 144 223 7.9E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_17590 a969b4e58208589a9352af80f3fab5bb 228 Pfam PF00072 Response regulator receiver domain 4 113 9.1E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_17590 a969b4e58208589a9352af80f3fab5bb 228 SUPERFAMILY SSF46894 122 225 7.37E-25 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 IX88_17590 a969b4e58208589a9352af80f3fab5bb 228 SMART SM00448 2 112 3.1E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_17590 a969b4e58208589a9352af80f3fab5bb 228 Gene3D G3DSA:1.10.10.10 121 225 2.0E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_17590 a969b4e58208589a9352af80f3fab5bb 228 SUPERFAMILY SSF52172 1 126 2.85E-41 T 11-10-2018 IPR011006 CheY-like superfamily IX88_17590 a969b4e58208589a9352af80f3fab5bb 228 Gene3D G3DSA:3.40.50.2300 1 120 5.3E-37 T 11-10-2018 IX88_04090 7331192c746cfa7a69390eb4e4c10c3e 432 SUPERFAMILY SSF56601 35 403 1.25E-68 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like IX88_04090 7331192c746cfa7a69390eb4e4c10c3e 432 Pfam PF00144 Beta-lactamase 50 390 1.7E-53 T 11-10-2018 IPR001466 Beta-lactamase-related IX88_04090 7331192c746cfa7a69390eb4e4c10c3e 432 Gene3D G3DSA:3.40.710.30 33 408 6.5E-75 T 11-10-2018 IX88_06580 38ef7153ce929db2a3bac9e35911fe3c 448 Pfam PF03573 outer membrane porin, OprD family 29 447 3.5E-23 T 11-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 IX88_06580 38ef7153ce929db2a3bac9e35911fe3c 448 Gene3D G3DSA:2.40.160.10 27 448 2.3E-46 T 11-10-2018 IPR023614 Porin domain superfamily IX88_09875 01401bf7d5a22341c33d1ee8a101e0fa 228 Gene3D G3DSA:3.40.50.300 1 227 3.6E-76 T 11-10-2018 IX88_09875 01401bf7d5a22341c33d1ee8a101e0fa 228 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 220 3.0E-70 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 IX88_09875 01401bf7d5a22341c33d1ee8a101e0fa 228 SUPERFAMILY SSF52540 4 224 4.05E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_09875 01401bf7d5a22341c33d1ee8a101e0fa 228 Pfam PF02224 Cytidylate kinase 6 222 3.3E-66 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 IX88_09875 01401bf7d5a22341c33d1ee8a101e0fa 228 Hamap MF_00238 Cytidylate kinase [cmk]. 4 225 32.482 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 IX88_15200 d952ae26798ef8686eb1d9ce283088f8 542 Pfam PF00501 AMP-binding enzyme 38 442 7.9E-77 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IX88_15200 d952ae26798ef8686eb1d9ce283088f8 542 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 6 533 9.7E-250 T 11-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 IX88_15200 d952ae26798ef8686eb1d9ce283088f8 542 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 11-10-2018 IPR020845 AMP-binding, conserved site IX88_15200 d952ae26798ef8686eb1d9ce283088f8 542 Gene3D G3DSA:3.40.50.12780 1 437 4.9E-161 T 11-10-2018 IX88_15200 d952ae26798ef8686eb1d9ce283088f8 542 Gene3D G3DSA:3.30.300.310 438 541 8.7E-27 T 11-10-2018 IX88_15200 d952ae26798ef8686eb1d9ce283088f8 542 SUPERFAMILY SSF56801 11 536 3.14E-124 T 11-10-2018 IX88_15200 d952ae26798ef8686eb1d9ce283088f8 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 451 526 1.3E-9 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IX88_15025 9dce539ab21da9542d69b53c92505fdb 71 Pfam PF13619 KTSC domain 7 60 1.0E-5 T 11-10-2018 IPR025309 KTSC domain IX88_17905 41612d0f10e52b7af32951aab70da404 444 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 13 361 5.2E-145 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 IX88_17905 41612d0f10e52b7af32951aab70da404 444 PIRSF PIRSF006809 5 421 1.6E-137 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 IX88_17905 41612d0f10e52b7af32951aab70da404 444 Pfam PF13167 GTP-binding GTPase N-terminal 28 113 1.1E-31 T 11-10-2018 IPR025121 GTPase HflX, N-terminal IX88_17905 41612d0f10e52b7af32951aab70da404 444 Gene3D G3DSA:3.40.50.300 199 366 1.5E-35 T 11-10-2018 IX88_17905 41612d0f10e52b7af32951aab70da404 444 Pfam PF01926 50S ribosome-binding GTPase 202 319 5.7E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_17905 41612d0f10e52b7af32951aab70da404 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 223 241 2.4E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_17905 41612d0f10e52b7af32951aab70da404 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 202 222 2.4E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_17905 41612d0f10e52b7af32951aab70da404 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 269 287 2.4E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_17905 41612d0f10e52b7af32951aab70da404 444 Hamap MF_00900 GTPase HflX [hflX]. 28 390 46.502 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 IX88_17905 41612d0f10e52b7af32951aab70da404 444 Gene3D G3DSA:3.40.50.11060 18 139 2.8E-38 T 11-10-2018 IX88_17905 41612d0f10e52b7af32951aab70da404 444 SUPERFAMILY SSF52540 199 373 1.14E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_17905 41612d0f10e52b7af32951aab70da404 444 Pfam PF16360 GTP-binding GTPase Middle Region 115 194 1.1E-27 T 11-10-2018 IPR032305 GTP-binding protein, middle domain IX88_16285 962e7fa4ec45362b10ea6f088def3ff2 172 SUPERFAMILY SSF55961 20 161 2.64E-12 T 11-10-2018 IX88_16285 962e7fa4ec45362b10ea6f088def3ff2 172 Gene3D G3DSA:3.30.530.20 17 161 5.5E-12 T 11-10-2018 IPR023393 START-like domain superfamily IX88_02285 a03548268cfb82f2dbcd9903b373b5d2 198 SMART SM00014 58 166 2.0E-12 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase IX88_02285 a03548268cfb82f2dbcd9903b373b5d2 198 Pfam PF01569 PAP2 superfamily 62 169 7.9E-12 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase IX88_02285 a03548268cfb82f2dbcd9903b373b5d2 198 SUPERFAMILY SSF48317 5 172 3.27E-26 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily IX88_02285 a03548268cfb82f2dbcd9903b373b5d2 198 Gene3D G3DSA:1.20.144.10 89 182 5.9E-15 T 11-10-2018 IX88_02345 0b1c41fc6bb9e584ca54af3389e786f8 297 SUPERFAMILY SSF53850 87 289 8.69E-41 T 11-10-2018 IX88_02345 0b1c41fc6bb9e584ca54af3389e786f8 297 SUPERFAMILY SSF46785 4 84 2.36E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_02345 0b1c41fc6bb9e584ca54af3389e786f8 297 Gene3D G3DSA:3.40.190.290 89 289 3.3E-51 T 11-10-2018 IX88_02345 0b1c41fc6bb9e584ca54af3389e786f8 297 Gene3D G3DSA:1.10.10.10 3 88 2.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_02345 0b1c41fc6bb9e584ca54af3389e786f8 297 Pfam PF03466 LysR substrate binding domain 87 289 4.2E-38 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_02345 0b1c41fc6bb9e584ca54af3389e786f8 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.4E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_05955 a2680123dcb67c33bb8b63797dfb23ce 469 SMART SM00382 99 252 1.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_05955 a2680123dcb67c33bb8b63797dfb23ce 469 Gene3D G3DSA:1.10.260.30 310 447 2.3E-37 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 IX88_05955 a2680123dcb67c33bb8b63797dfb23ce 469 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 1.7E-72 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IX88_05955 a2680123dcb67c33bb8b63797dfb23ce 469 SMART SM00963 1 86 1.3E-36 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IX88_05955 a2680123dcb67c33bb8b63797dfb23ce 469 SUPERFAMILY SSF52540 42 351 5.31E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_05955 a2680123dcb67c33bb8b63797dfb23ce 469 SMART SM00962 100 296 4.1E-112 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IX88_05955 a2680123dcb67c33bb8b63797dfb23ce 469 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 431 7.6E-175 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 IX88_05955 a2680123dcb67c33bb8b63797dfb23ce 469 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 442 33.769 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 IX88_05955 a2680123dcb67c33bb8b63797dfb23ce 469 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 4.5E-22 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IX88_05955 a2680123dcb67c33bb8b63797dfb23ce 469 Gene3D G3DSA:1.20.120.140 5 305 6.5E-122 T 11-10-2018 IX88_05955 a2680123dcb67c33bb8b63797dfb23ce 469 Gene3D G3DSA:3.40.50.300 90 285 6.5E-122 T 11-10-2018 IX88_05955 a2680123dcb67c33bb8b63797dfb23ce 469 SUPERFAMILY SSF47446 298 432 1.31E-43 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 IX88_05955 a2680123dcb67c33bb8b63797dfb23ce 469 Pfam PF02978 Signal peptide binding domain 329 429 8.5E-30 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 IX88_05955 a2680123dcb67c33bb8b63797dfb23ce 469 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 IX88_17950 f6360ddffd706be4bab3fe4b944c19cf 217 Gene3D G3DSA:3.40.30.10 11 203 1.4E-59 T 11-10-2018 IX88_17950 f6360ddffd706be4bab3fe4b944c19cf 217 Gene3D G3DSA:1.20.1050.10 87 195 1.4E-59 T 11-10-2018 IX88_17950 f6360ddffd706be4bab3fe4b944c19cf 217 Pfam PF02798 Glutathione S-transferase, N-terminal domain 11 78 4.5E-12 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 IX88_17950 f6360ddffd706be4bab3fe4b944c19cf 217 SUPERFAMILY SSF47616 90 207 1.17E-16 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IX88_17950 f6360ddffd706be4bab3fe4b944c19cf 217 SUPERFAMILY SSF52833 6 87 2.16E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_15965 830a246478dda2190b837c16e3f69b11 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 175.477 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 IX88_15965 830a246478dda2190b837c16e3f69b11 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 250 328 3.0E-27 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 IX88_15965 830a246478dda2190b837c16e3f69b11 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 9 235 8.0E-116 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 IX88_15965 830a246478dda2190b837c16e3f69b11 334 Gene3D G3DSA:3.40.50.300 18 181 3.5E-37 T 11-10-2018 IX88_15965 830a246478dda2190b837c16e3f69b11 334 SUPERFAMILY SSF46785 257 330 2.38E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_15965 830a246478dda2190b837c16e3f69b11 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 326 3.6E-143 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 IX88_15965 830a246478dda2190b837c16e3f69b11 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 326 9.9E-30 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 IX88_15965 830a246478dda2190b837c16e3f69b11 334 Gene3D G3DSA:1.10.8.60 182 256 6.5E-32 T 11-10-2018 IX88_15965 830a246478dda2190b837c16e3f69b11 334 SUPERFAMILY SSF52540 20 252 1.96E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_15965 830a246478dda2190b837c16e3f69b11 334 Gene3D G3DSA:1.10.10.10 257 333 4.9E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_15965 830a246478dda2190b837c16e3f69b11 334 SMART SM00382 51 178 9.9E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_12230 783e2a6a5da926a950c3c310a5494beb 757 Pfam PF00384 Molybdopterin oxidoreductase 65 445 1.2E-46 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_12230 783e2a6a5da926a950c3c310a5494beb 757 SUPERFAMILY SSF50692 633 756 1.65E-24 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily IX88_12230 783e2a6a5da926a950c3c310a5494beb 757 Gene3D G3DSA:2.40.40.20 613 757 2.0E-20 T 11-10-2018 IX88_12230 783e2a6a5da926a950c3c310a5494beb 757 Gene3D G3DSA:2.20.25.90 2 67 5.4E-14 T 11-10-2018 IX88_12230 783e2a6a5da926a950c3c310a5494beb 757 Gene3D G3DSA:3.40.228.10 141 334 1.6E-89 T 11-10-2018 IX88_12230 783e2a6a5da926a950c3c310a5494beb 757 Gene3D G3DSA:3.40.50.740 72 483 1.6E-89 T 11-10-2018 IX88_12230 783e2a6a5da926a950c3c310a5494beb 757 SUPERFAMILY SSF53706 9 521 2.36E-116 T 11-10-2018 IX88_12230 783e2a6a5da926a950c3c310a5494beb 757 SMART SM00926 8 62 1.9E-11 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_12230 783e2a6a5da926a950c3c310a5494beb 757 Pfam PF01568 Molydopterin dinucleotide binding domain 637 750 2.5E-17 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 IX88_12230 783e2a6a5da926a950c3c310a5494beb 757 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 9 57 8.4E-12 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_07855 8c0807ec610e0d9d01bafb22800b84d9 284 Pfam PF00106 short chain dehydrogenase 7 200 1.7E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07855 8c0807ec610e0d9d01bafb22800b84d9 284 Gene3D G3DSA:3.40.50.720 1 280 1.4E-71 T 11-10-2018 IX88_07855 8c0807ec610e0d9d01bafb22800b84d9 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07855 8c0807ec610e0d9d01bafb22800b84d9 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07855 8c0807ec610e0d9d01bafb22800b84d9 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07855 8c0807ec610e0d9d01bafb22800b84d9 284 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_07855 8c0807ec610e0d9d01bafb22800b84d9 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.9E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07855 8c0807ec610e0d9d01bafb22800b84d9 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.9E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07855 8c0807ec610e0d9d01bafb22800b84d9 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 8.9E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07855 8c0807ec610e0d9d01bafb22800b84d9 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 8.9E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07855 8c0807ec610e0d9d01bafb22800b84d9 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 8.9E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07855 8c0807ec610e0d9d01bafb22800b84d9 284 SUPERFAMILY SSF51735 1 278 8.83E-67 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_08975 d54b5c0b2bac7237efbca9a56f98373f 311 Gene3D G3DSA:3.40.190.10 169 270 5.7E-64 T 11-10-2018 IX88_08975 d54b5c0b2bac7237efbca9a56f98373f 311 SUPERFAMILY SSF46785 10 89 6.09E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_08975 d54b5c0b2bac7237efbca9a56f98373f 311 Pfam PF03466 LysR substrate binding domain 95 301 1.3E-39 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_08975 d54b5c0b2bac7237efbca9a56f98373f 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 2.0E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_08975 d54b5c0b2bac7237efbca9a56f98373f 311 SUPERFAMILY SSF53850 95 304 2.71E-42 T 11-10-2018 IX88_08975 d54b5c0b2bac7237efbca9a56f98373f 311 Gene3D G3DSA:1.10.10.10 9 92 8.9E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_08975 d54b5c0b2bac7237efbca9a56f98373f 311 Gene3D G3DSA:3.40.190.10 98 298 5.7E-64 T 11-10-2018 IX88_04055 a31058690f102ba6204ddffbd28ccc77 315 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 100 115 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 IX88_04055 a31058690f102ba6204ddffbd28ccc77 315 SUPERFAMILY SSF53335 83 312 2.01E-49 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_04055 a31058690f102ba6204ddffbd28ccc77 315 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 89 314 2.9E-83 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 IX88_04055 a31058690f102ba6204ddffbd28ccc77 315 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 80 314 38.696 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 IX88_04055 a31058690f102ba6204ddffbd28ccc77 315 Gene3D G3DSA:3.40.50.150 95 315 3.8E-75 T 11-10-2018 IX88_04055 a31058690f102ba6204ddffbd28ccc77 315 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 222 236 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 IX88_04055 a31058690f102ba6204ddffbd28ccc77 315 Pfam PF01209 ubiE/COQ5 methyltransferase family 83 314 5.7E-100 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 SUPERFAMILY SSF82693 39 131 1.15E-22 T 11-10-2018 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 SUPERFAMILY SSF82693 565 664 8.37E-24 T 11-10-2018 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 Gene3D G3DSA:3.30.70.1430 39 812 0.0 T 11-10-2018 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 SUPERFAMILY SSF82714 184 273 9.68E-23 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 Gene3D G3DSA:3.30.70.1320 134 333 0.0 T 11-10-2018 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 Pfam PF00873 AcrB/AcrD/AcrF family 2 1020 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 Gene3D G3DSA:1.20.1640.10 513 1017 0.0 T 11-10-2018 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 Gene3D G3DSA:3.30.70.1440 664 860 0.0 T 11-10-2018 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 Gene3D G3DSA:3.30.70.1430 567 663 0.0 T 11-10-2018 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 SUPERFAMILY SSF82866 803 1022 6.8E-42 T 11-10-2018 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 SUPERFAMILY SSF82866 297 498 1.23E-50 T 11-10-2018 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 SUPERFAMILY SSF82714 720 801 1.44E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 Gene3D G3DSA:3.30.2090.10 716 804 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 SUPERFAMILY SSF82693 136 330 8.89E-26 T 11-10-2018 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1032 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 IX88_10930 968f31d49fe5dc9cf4f8a4208359cf44 1036 Gene3D G3DSA:1.20.1640.10 9 512 0.0 T 11-10-2018 IX88_09885 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 SMART SM00411 6 96 5.0E-37 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IX88_09885 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 Gene3D G3DSA:4.10.520.10 6 99 9.4E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IX88_09885 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 52 71 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 IX88_09885 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 PRINTS PR01727 Prokaryotic integration host factor signature 46 61 2.1E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IX88_09885 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 PRINTS PR01727 Prokaryotic integration host factor signature 80 94 2.1E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IX88_09885 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 PRINTS PR01727 Prokaryotic integration host factor signature 64 77 2.1E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IX88_09885 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 SUPERFAMILY SSF47729 6 96 5.15E-28 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IX88_09885 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 7 98 5.0E-39 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 IX88_09885 f74fa26c5e15e9b6f22ca8ee71dc69c5 100 Pfam PF00216 Bacterial DNA-binding protein 6 96 1.1E-27 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IX88_11060 c3bf7374a4ee28b6e47873bc4926ea6f 353 SUPERFAMILY SSF111369 57 112 1.2E-7 T 11-10-2018 IX88_11060 c3bf7374a4ee28b6e47873bc4926ea6f 353 SUPERFAMILY SSF111369 181 298 6.8E-11 T 11-10-2018 IX88_11060 c3bf7374a4ee28b6e47873bc4926ea6f 353 Gene3D G3DSA:1.10.287.470 91 120 1.4E-9 T 11-10-2018 IX88_11060 c3bf7374a4ee28b6e47873bc4926ea6f 353 Gene3D G3DSA:2.40.50.100 59 90 1.4E-9 T 11-10-2018 IX88_11060 c3bf7374a4ee28b6e47873bc4926ea6f 353 SUPERFAMILY SSF111369 134 185 4.32E-6 T 11-10-2018 IX88_11060 c3bf7374a4ee28b6e47873bc4926ea6f 353 Gene3D G3DSA:2.40.30.170 238 353 5.2E-37 T 11-10-2018 IX88_11060 c3bf7374a4ee28b6e47873bc4926ea6f 353 Pfam PF13437 HlyD family secretion protein 224 334 1.9E-16 T 11-10-2018 IX88_11060 c3bf7374a4ee28b6e47873bc4926ea6f 353 Pfam PF13533 Biotin-lipoyl like 60 101 4.3E-12 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain IX88_11060 c3bf7374a4ee28b6e47873bc4926ea6f 353 Gene3D G3DSA:1.10.287.470 124 192 1.9E-12 T 11-10-2018 IX88_02440 17a48a5bc5a520f721a73b2c32b94216 206 Pfam PF08362 YcdC-like protein, C-terminal region 63 206 5.0E-53 T 11-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 IX88_02440 17a48a5bc5a520f721a73b2c32b94216 206 SUPERFAMILY SSF46689 6 83 8.72E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_02440 17a48a5bc5a520f721a73b2c32b94216 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.8E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_02440 17a48a5bc5a520f721a73b2c32b94216 206 Gene3D G3DSA:1.10.357.10 63 206 2.3E-46 T 11-10-2018 IX88_02440 17a48a5bc5a520f721a73b2c32b94216 206 Gene3D G3DSA:1.10.10.60 1 62 1.4E-18 T 11-10-2018 IX88_02440 17a48a5bc5a520f721a73b2c32b94216 206 SUPERFAMILY SSF48498 80 206 9.58E-36 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_02440 17a48a5bc5a520f721a73b2c32b94216 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.2E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_02440 17a48a5bc5a520f721a73b2c32b94216 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.2E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_01775 6b7107f1cdef1092cc59fc90f7f7207c 454 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.839 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 IX88_01775 6b7107f1cdef1092cc59fc90f7f7207c 454 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 IX88_01775 6b7107f1cdef1092cc59fc90f7f7207c 454 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 6.5E-195 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 IX88_01775 6b7107f1cdef1092cc59fc90f7f7207c 454 SUPERFAMILY SSF51161 252 433 1.26E-50 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily IX88_01775 6b7107f1cdef1092cc59fc90f7f7207c 454 Gene3D G3DSA:3.90.550.10 1 224 1.0E-65 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_01775 6b7107f1cdef1092cc59fc90f7f7207c 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 2.0E-7 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_01775 6b7107f1cdef1092cc59fc90f7f7207c 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 263 296 6.7E-5 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_01775 6b7107f1cdef1092cc59fc90f7f7207c 454 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 392 426 3.7E-9 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_01775 6b7107f1cdef1092cc59fc90f7f7207c 454 Gene3D G3DSA:2.160.10.10 225 453 3.4E-72 T 11-10-2018 IX88_01775 6b7107f1cdef1092cc59fc90f7f7207c 454 SUPERFAMILY SSF53448 1 249 5.22E-64 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_01775 6b7107f1cdef1092cc59fc90f7f7207c 454 Pfam PF12804 MobA-like NTP transferase domain 5 124 3.9E-19 T 11-10-2018 IPR025877 MobA-like NTP transferase IX88_15560 a0d426777111e57f44d45bd6c604b521 464 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 1.1E-26 T 11-10-2018 IX88_15560 a0d426777111e57f44d45bd6c604b521 464 PRINTS PR00173 Glutamate-aspartate symporter signature 260 279 1.1E-26 T 11-10-2018 IX88_15560 a0d426777111e57f44d45bd6c604b521 464 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.1E-26 T 11-10-2018 IX88_15560 a0d426777111e57f44d45bd6c604b521 464 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.1E-26 T 11-10-2018 IX88_15560 a0d426777111e57f44d45bd6c604b521 464 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.1E-26 T 11-10-2018 IX88_15560 a0d426777111e57f44d45bd6c604b521 464 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 1.1E-26 T 11-10-2018 IX88_15560 a0d426777111e57f44d45bd6c604b521 464 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 1.1E-26 T 11-10-2018 IX88_15560 a0d426777111e57f44d45bd6c604b521 464 Gene3D G3DSA:1.10.3860.10 19 461 3.5E-108 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IX88_15560 a0d426777111e57f44d45bd6c604b521 464 Pfam PF00375 Sodium:dicarboxylate symporter family 29 442 1.1E-103 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 IX88_15560 a0d426777111e57f44d45bd6c604b521 464 SUPERFAMILY SSF118215 29 442 2.35E-98 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 Pfam PF02310 B12 binding domain 749 842 4.6E-18 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 Pfam PF02574 Homocysteine S-methyltransferase 16 322 3.7E-79 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 Gene3D G3DSA:3.20.20.330 2 336 6.6E-128 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 Gene3D G3DSA:3.10.196.10 913 1223 5.8E-125 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 Pfam PF00809 Pterin binding enzyme 357 595 1.2E-56 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 PIRSF PIRSF000381 1 1196 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 SUPERFAMILY SSF51717 353 621 2.75E-90 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1209 2.1E-112 T 11-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 SUPERFAMILY SSF56507 907 1224 1.09E-114 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 SUPERFAMILY SSF82282 6 396 1.57E-117 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 SUPERFAMILY SSF47644 653 740 7.19E-28 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 Gene3D G3DSA:1.10.1240.10 650 738 6.8E-40 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 SMART SM01018 658 741 8.6E-43 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 SUPERFAMILY SSF52242 744 895 1.18E-44 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 Pfam PF02607 B12 binding domain 660 733 9.3E-24 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 TIGRFAM TIGR02082 metH: methionine synthase 12 1193 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 Gene3D G3DSA:3.20.20.20 337 645 1.7E-132 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 Gene3D G3DSA:1.10.288.10 938 1093 5.8E-125 T 11-10-2018 IX88_06870 97dc0bfdfb37be0ce4612358a073b17e 1228 Gene3D G3DSA:3.40.50.280 745 897 8.8E-55 T 11-10-2018 IX88_03120 d7e4385fe8cfc97abe509e50390d56f5 384 SUPERFAMILY SSF54106 55 103 8.89E-7 T 11-10-2018 IX88_03120 d7e4385fe8cfc97abe509e50390d56f5 384 Pfam PF01476 LysM domain 57 102 7.7E-13 T 11-10-2018 IPR018392 LysM domain IX88_03120 d7e4385fe8cfc97abe509e50390d56f5 384 Gene3D G3DSA:3.10.350.10 56 101 3.0E-12 T 11-10-2018 IPR036779 LysM domain superfamily IX88_02635 74e456a390fcb8c91dca683bf3aae1ac 420 Gene3D G3DSA:3.40.50.720 215 420 3.5E-62 T 11-10-2018 IX88_02635 74e456a390fcb8c91dca683bf3aae1ac 420 SUPERFAMILY SSF48179 185 281 2.72E-22 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_02635 74e456a390fcb8c91dca683bf3aae1ac 420 PIRSF PIRSF000124 1 419 1.3E-106 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 IX88_02635 74e456a390fcb8c91dca683bf3aae1ac 420 Gene3D G3DSA:1.20.5.100 187 214 2.0E-10 T 11-10-2018 IX88_02635 74e456a390fcb8c91dca683bf3aae1ac 420 Gene3D G3DSA:3.40.50.720 1 186 6.3E-17 T 11-10-2018 IX88_02635 74e456a390fcb8c91dca683bf3aae1ac 420 SUPERFAMILY SSF51735 1 188 2.66E-10 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_02635 74e456a390fcb8c91dca683bf3aae1ac 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 300 404 1.2E-24 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 IX88_02635 74e456a390fcb8c91dca683bf3aae1ac 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 400 1.1E-57 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 IX88_02635 74e456a390fcb8c91dca683bf3aae1ac 420 SUPERFAMILY SSF52413 285 414 1.96E-32 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 IX88_02635 74e456a390fcb8c91dca683bf3aae1ac 420 SMART SM00984 300 404 2.4E-36 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 IX88_02635 74e456a390fcb8c91dca683bf3aae1ac 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 186 276 3.0E-24 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 IX88_02635 74e456a390fcb8c91dca683bf3aae1ac 420 PIRSF PIRSF500134 1 420 1.5E-114 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 IX88_17355 ac3fba9dc036e2adfff370d4a29d3738 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 2.7E-11 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 IX88_17355 ac3fba9dc036e2adfff370d4a29d3738 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 103 112 2.7E-11 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 IX88_17355 ac3fba9dc036e2adfff370d4a29d3738 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 94 102 2.7E-11 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 IX88_17355 ac3fba9dc036e2adfff370d4a29d3738 143 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 140 5.5E-44 T 11-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L IX88_17355 ac3fba9dc036e2adfff370d4a29d3738 143 Gene3D G3DSA:1.10.1200.120 3 143 2.1E-41 T 11-10-2018 IPR036019 Gated mechanosensitive channel IX88_17355 ac3fba9dc036e2adfff370d4a29d3738 143 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 11-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site IX88_17355 ac3fba9dc036e2adfff370d4a29d3738 143 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 141 23.567 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 IX88_17355 ac3fba9dc036e2adfff370d4a29d3738 143 SUPERFAMILY SSF81330 12 136 2.48E-34 T 11-10-2018 IPR036019 Gated mechanosensitive channel IX88_17355 ac3fba9dc036e2adfff370d4a29d3738 143 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 142 3.0E-37 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 IX88_08415 51d90c07d7ad786ac554b216ef381462 213 SUPERFAMILY SSF46689 33 99 3.85E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_08415 51d90c07d7ad786ac554b216ef381462 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 40 84 7.5E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_08415 51d90c07d7ad786ac554b216ef381462 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 61 84 3.1E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_08415 51d90c07d7ad786ac554b216ef381462 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 53 3.1E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_08415 51d90c07d7ad786ac554b216ef381462 213 Gene3D G3DSA:1.10.357.10 14 207 2.8E-19 T 11-10-2018 IX88_14205 3207e589734a68ccab90ddf8651dcd61 254 Pfam PF00717 Peptidase S24-like 163 219 1.6E-6 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C IX88_14205 3207e589734a68ccab90ddf8651dcd61 254 SUPERFAMILY SSF51306 155 231 7.15E-11 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily IX88_14205 3207e589734a68ccab90ddf8651dcd61 254 SMART SM00530 10 65 3.9E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IX88_14205 3207e589734a68ccab90ddf8651dcd61 254 Gene3D G3DSA:1.10.260.40 3 69 1.4E-18 T 11-10-2018 IX88_14205 3207e589734a68ccab90ddf8651dcd61 254 SUPERFAMILY SSF47413 5 71 2.06E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IX88_14205 3207e589734a68ccab90ddf8651dcd61 254 Gene3D G3DSA:2.10.109.10 117 241 1.0E-7 T 11-10-2018 IX88_14205 3207e589734a68ccab90ddf8651dcd61 254 Pfam PF01381 Helix-turn-helix 11 65 2.5E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IX88_13715 b0e71eab3c39428d51436f266df3d1a5 212 Gene3D G3DSA:1.10.357.10 9 207 3.0E-17 T 11-10-2018 IX88_13715 b0e71eab3c39428d51436f266df3d1a5 212 SUPERFAMILY SSF46689 17 89 2.52E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_13715 b0e71eab3c39428d51436f266df3d1a5 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 74 3.6E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_04625 af1d1f2163c0cd7d76ef690bbd1cb934 256 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 13 249 15.553 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 IX88_04625 af1d1f2163c0cd7d76ef690bbd1cb934 256 Pfam PF00902 Sec-independent protein translocase protein (TatC) 23 232 1.1E-59 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 IX88_04625 af1d1f2163c0cd7d76ef690bbd1cb934 256 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 96 114 3.9E-38 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 IX88_04625 af1d1f2163c0cd7d76ef690bbd1cb934 256 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 114 140 3.9E-38 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 IX88_04625 af1d1f2163c0cd7d76ef690bbd1cb934 256 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 165 193 3.9E-38 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 IX88_04625 af1d1f2163c0cd7d76ef690bbd1cb934 256 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 19 46 3.9E-38 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 IX88_04625 af1d1f2163c0cd7d76ef690bbd1cb934 256 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 20 237 2.6E-63 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 IX88_13670 5011a710022b9d7b239d284730d14651 255 SUPERFAMILY SSF109604 65 182 5.32E-13 T 11-10-2018 IX88_13670 5011a710022b9d7b239d284730d14651 255 Pfam PF01966 HD domain 82 169 4.6E-6 T 11-10-2018 IPR006674 HD domain IX88_13670 5011a710022b9d7b239d284730d14651 255 Gene3D G3DSA:1.10.3210.10 62 219 1.1E-9 T 11-10-2018 IX88_08250 77f84e10790881d3879407882094bb1c 271 Gene3D G3DSA:3.40.50.720 3 157 6.3E-25 T 11-10-2018 IX88_08250 77f84e10790881d3879407882094bb1c 271 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 156 259 1.5E-26 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 IX88_08250 77f84e10790881d3879407882094bb1c 271 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 7 260 20.437 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 IX88_08250 77f84e10790881d3879407882094bb1c 271 PIRSF PIRSF000193 6 263 2.7E-50 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 IX88_08250 77f84e10790881d3879407882094bb1c 271 SUPERFAMILY SSF48179 155 261 1.12E-26 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_08250 77f84e10790881d3879407882094bb1c 271 Gene3D G3DSA:1.10.3730.10 158 264 8.6E-31 T 11-10-2018 IX88_08250 77f84e10790881d3879407882094bb1c 271 SUPERFAMILY SSF51735 8 152 4.27E-13 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_08250 77f84e10790881d3879407882094bb1c 271 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 9 93 9.1E-7 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal IX88_07335 7917ff2967b6ef382e22eb54f54a8d3b 529 Pfam PF00005 ABC transporter 31 187 8.3E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_07335 7917ff2967b6ef382e22eb54f54a8d3b 529 Pfam PF00005 ABC transporter 304 453 4.0E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_07335 7917ff2967b6ef382e22eb54f54a8d3b 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 504 527 0.062 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 IX88_07335 7917ff2967b6ef382e22eb54f54a8d3b 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 261 0.25 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 IX88_07335 7917ff2967b6ef382e22eb54f54a8d3b 529 SUPERFAMILY SSF52540 277 524 2.18E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_07335 7917ff2967b6ef382e22eb54f54a8d3b 529 SMART SM00382 40 237 1.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_07335 7917ff2967b6ef382e22eb54f54a8d3b 529 SMART SM00382 312 510 5.0E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_07335 7917ff2967b6ef382e22eb54f54a8d3b 529 Gene3D G3DSA:3.40.50.300 275 529 3.2E-83 T 11-10-2018 IX88_07335 7917ff2967b6ef382e22eb54f54a8d3b 529 Gene3D G3DSA:3.40.50.300 13 274 1.1E-74 T 11-10-2018 IX88_07335 7917ff2967b6ef382e22eb54f54a8d3b 529 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_07335 7917ff2967b6ef382e22eb54f54a8d3b 529 ProSitePatterns PS00211 ABC transporters family signature. 425 439 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_07335 7917ff2967b6ef382e22eb54f54a8d3b 529 SUPERFAMILY SSF52540 16 259 9.67E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04665 b8bffb0ce33aa0e74a904e047f98a4e9 565 Gene3D G3DSA:3.30.160.270 377 549 1.2E-52 T 11-10-2018 IX88_04665 b8bffb0ce33aa0e74a904e047f98a4e9 565 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 7 551 52.439 T 11-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 IX88_04665 b8bffb0ce33aa0e74a904e047f98a4e9 565 SUPERFAMILY SSF110921 442 549 2.75E-29 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 IX88_04665 b8bffb0ce33aa0e74a904e047f98a4e9 565 SUPERFAMILY SSF89000 388 438 9.02E-16 T 11-10-2018 IX88_04665 b8bffb0ce33aa0e74a904e047f98a4e9 565 Pfam PF08502 LeuA allosteric (dimerisation) domain 422 549 2.2E-24 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 IX88_04665 b8bffb0ce33aa0e74a904e047f98a4e9 565 Pfam PF00682 HMGL-like 33 313 9.6E-77 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 IX88_04665 b8bffb0ce33aa0e74a904e047f98a4e9 565 SUPERFAMILY SSF51569 22 330 3.66E-99 T 11-10-2018 IX88_04665 b8bffb0ce33aa0e74a904e047f98a4e9 565 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 6 550 1.4E-229 T 11-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 IX88_04665 b8bffb0ce33aa0e74a904e047f98a4e9 565 SMART SM00917 422 550 1.6E-27 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 IX88_04665 b8bffb0ce33aa0e74a904e047f98a4e9 565 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 40 56 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 IX88_04665 b8bffb0ce33aa0e74a904e047f98a4e9 565 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 243 256 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 IX88_04665 b8bffb0ce33aa0e74a904e047f98a4e9 565 Gene3D G3DSA:3.20.20.70 10 376 5.0E-154 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_07780 2ffec8d5fba210a539fdfaf4bfe22c2b 178 Pfam PF11578 Protein of unknown function (DUF3237) 29 176 5.0E-44 T 11-10-2018 IPR020915 Uncharacterised protein family UPF0311 IX88_07780 2ffec8d5fba210a539fdfaf4bfe22c2b 178 Hamap MF_00775 UPF0311 protein . 28 178 26.772 T 11-10-2018 IPR020915 Uncharacterised protein family UPF0311 IX88_07780 2ffec8d5fba210a539fdfaf4bfe22c2b 178 Gene3D G3DSA:2.40.160.20 19 178 1.5E-69 T 11-10-2018 IX88_02190 013b5bc851c9419fcde946fd9a8eeebf 360 Gene3D G3DSA:1.20.1050.90 116 294 1.1E-75 T 11-10-2018 IX88_02190 013b5bc851c9419fcde946fd9a8eeebf 360 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 1.0E-83 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 IX88_02190 013b5bc851c9419fcde946fd9a8eeebf 360 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 337 2.7E-24 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal IX88_02190 013b5bc851c9419fcde946fd9a8eeebf 360 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 360 79.023 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 IX88_02190 013b5bc851c9419fcde946fd9a8eeebf 360 Gene3D G3DSA:3.40.50.300 6 329 1.1E-75 T 11-10-2018 IX88_02190 013b5bc851c9419fcde946fd9a8eeebf 360 SUPERFAMILY SSF52540 1 334 2.75E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_17075 bad57d7f6724446c5b5ff22c920d42a1 285 Gene3D G3DSA:2.40.10.350 182 259 4.3E-36 T 11-10-2018 IX88_17075 bad57d7f6724446c5b5ff22c920d42a1 285 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 6 276 2.2E-48 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 IX88_17075 bad57d7f6724446c5b5ff22c920d42a1 285 PIRSF PIRSF038471 3 285 6.4E-64 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 IX88_17075 bad57d7f6724446c5b5ff22c920d42a1 285 Gene3D G3DSA:2.40.10.340 123 270 4.3E-36 T 11-10-2018 IX88_17075 bad57d7f6724446c5b5ff22c920d42a1 285 Pfam PF04085 rod shape-determining protein MreC 125 271 4.1E-37 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 IX88_07600 acb6054bd53ae6fe87781e43454666ac 186 Gene3D G3DSA:1.10.357.10 2 181 6.7E-19 T 11-10-2018 IX88_07600 acb6054bd53ae6fe87781e43454666ac 186 SUPERFAMILY SSF46689 8 73 3.44E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_07600 acb6054bd53ae6fe87781e43454666ac 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.2E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_07600 acb6054bd53ae6fe87781e43454666ac 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.2E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_07600 acb6054bd53ae6fe87781e43454666ac 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 4.4E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_10620 7c29ef40e57d744272306a6a5867573f 293 SUPERFAMILY SSF53850 90 291 1.86E-37 T 11-10-2018 IX88_10620 7c29ef40e57d744272306a6a5867573f 293 Gene3D G3DSA:1.10.10.10 1 90 1.8E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_10620 7c29ef40e57d744272306a6a5867573f 293 Pfam PF03466 LysR substrate binding domain 89 290 1.1E-38 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_10620 7c29ef40e57d744272306a6a5867573f 293 Gene3D G3DSA:3.40.190.290 91 292 1.1E-44 T 11-10-2018 IX88_10620 7c29ef40e57d744272306a6a5867573f 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.7E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_10620 7c29ef40e57d744272306a6a5867573f 293 SUPERFAMILY SSF46785 1 83 6.16E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_10620 7c29ef40e57d744272306a6a5867573f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_10620 7c29ef40e57d744272306a6a5867573f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_10620 7c29ef40e57d744272306a6a5867573f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_00735 6bafc495ca76ea88bfe1a56f568d1082 352 SUPERFAMILY SSF53067 192 348 1.3E-23 T 11-10-2018 IX88_00735 6bafc495ca76ea88bfe1a56f568d1082 352 SMART SM00842 12 181 0.0017 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 IX88_00735 6bafc495ca76ea88bfe1a56f568d1082 352 Gene3D G3DSA:3.30.420.40 188 315 4.1E-87 T 11-10-2018 IX88_00735 6bafc495ca76ea88bfe1a56f568d1082 352 SUPERFAMILY SSF53067 13 178 3.24E-14 T 11-10-2018 IX88_00735 6bafc495ca76ea88bfe1a56f568d1082 352 Gene3D G3DSA:3.30.1490.300 88 147 4.1E-87 T 11-10-2018 IX88_00735 6bafc495ca76ea88bfe1a56f568d1082 352 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 12 351 3.5E-113 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM IX88_00735 6bafc495ca76ea88bfe1a56f568d1082 352 PIRSF PIRSF019169 2 352 3.1E-123 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM IX88_00735 6bafc495ca76ea88bfe1a56f568d1082 352 Pfam PF11104 Type IV pilus assembly protein PilM; 14 351 6.3E-136 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM IX88_00735 6bafc495ca76ea88bfe1a56f568d1082 352 Gene3D G3DSA:3.30.420.40 13 349 4.1E-87 T 11-10-2018 IX88_06175 c6e01c96a7b39dc401c767985f0ad303 427 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 168 306 7.1E-40 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase IX88_06175 c6e01c96a7b39dc401c767985f0ad303 427 Gene3D G3DSA:3.40.50.720 157 313 1.6E-41 T 11-10-2018 IX88_06175 c6e01c96a7b39dc401c767985f0ad303 427 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 28.135 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 IX88_06175 c6e01c96a7b39dc401c767985f0ad303 427 SUPERFAMILY SSF69742 1 153 7.85E-45 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 IX88_06175 c6e01c96a7b39dc401c767985f0ad303 427 PIRSF PIRSF000445 1 427 2.5E-139 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 IX88_06175 c6e01c96a7b39dc401c767985f0ad303 427 SUPERFAMILY SSF69075 317 415 6.93E-21 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 IX88_06175 c6e01c96a7b39dc401c767985f0ad303 427 SUPERFAMILY SSF51735 159 315 1.19E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_06175 c6e01c96a7b39dc401c767985f0ad303 427 Gene3D G3DSA:3.30.460.30 2 154 5.5E-52 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 IX88_06175 c6e01c96a7b39dc401c767985f0ad303 427 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 413 3.9E-15 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 IX88_06175 c6e01c96a7b39dc401c767985f0ad303 427 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 95 118 - T 11-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 IX88_06175 c6e01c96a7b39dc401c767985f0ad303 427 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 414 6.1E-120 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 IX88_06175 c6e01c96a7b39dc401c767985f0ad303 427 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 152 5.1E-46 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 IX88_09605 83c2901c04bdb4395c0a17121f9524c0 388 Gene3D G3DSA:3.30.300.10 103 378 3.4E-175 T 11-10-2018 IX88_09605 83c2901c04bdb4395c0a17121f9524c0 388 Gene3D G3DSA:3.30.300.10 12 271 3.4E-175 T 11-10-2018 IX88_09605 83c2901c04bdb4395c0a17121f9524c0 388 Gene3D G3DSA:3.30.300.10 6 234 3.4E-175 T 11-10-2018 IX88_09605 83c2901c04bdb4395c0a17121f9524c0 388 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 375 2.7E-67 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 IX88_09605 83c2901c04bdb4395c0a17121f9524c0 388 SUPERFAMILY SSF55973 111 233 6.67E-51 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 IX88_09605 83c2901c04bdb4395c0a17121f9524c0 388 PIRSF PIRSF000497 1 387 1.7E-172 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 IX88_09605 83c2901c04bdb4395c0a17121f9524c0 388 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 102 5.7E-42 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 IX88_09605 83c2901c04bdb4395c0a17121f9524c0 388 SUPERFAMILY SSF55973 6 110 9.03E-46 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 IX88_09605 83c2901c04bdb4395c0a17121f9524c0 388 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 IX88_09605 83c2901c04bdb4395c0a17121f9524c0 388 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 IX88_09605 83c2901c04bdb4395c0a17121f9524c0 388 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 232 6.2E-45 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 IX88_09605 83c2901c04bdb4395c0a17121f9524c0 388 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 385 1.8E-188 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 IX88_09605 83c2901c04bdb4395c0a17121f9524c0 388 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 57.72 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 IX88_09605 83c2901c04bdb4395c0a17121f9524c0 388 SUPERFAMILY SSF55973 234 387 1.73E-69 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 IX88_01255 95dc7f0d664aca6e3b311d82b0ad3c0e 944 SUPERFAMILY SSF52540 6 570 7.08E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_01255 95dc7f0d664aca6e3b311d82b0ad3c0e 944 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 942 22.382 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 IX88_01255 95dc7f0d664aca6e3b311d82b0ad3c0e 944 SUPERFAMILY SSF52540 617 911 2.66E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_01255 95dc7f0d664aca6e3b311d82b0ad3c0e 944 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 927 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 IX88_01255 95dc7f0d664aca6e3b311d82b0ad3c0e 944 Gene3D G3DSA:3.30.190.20 132 245 2.0E-245 T 11-10-2018 IX88_01255 95dc7f0d664aca6e3b311d82b0ad3c0e 944 Gene3D G3DSA:1.10.8.280 288 404 2.0E-245 T 11-10-2018 IX88_01255 95dc7f0d664aca6e3b311d82b0ad3c0e 944 Pfam PF00005 ABC transporter 625 862 1.4E-11 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_01255 95dc7f0d664aca6e3b311d82b0ad3c0e 944 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_01255 95dc7f0d664aca6e3b311d82b0ad3c0e 944 Gene3D G3DSA:3.40.50.300 8 596 2.0E-245 T 11-10-2018 IX88_01255 95dc7f0d664aca6e3b311d82b0ad3c0e 944 Gene3D G3DSA:1.20.1580.10 695 832 2.1E-141 T 11-10-2018 IX88_01255 95dc7f0d664aca6e3b311d82b0ad3c0e 944 ProSitePatterns PS00211 ABC transporters family signature. 832 846 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_01255 95dc7f0d664aca6e3b311d82b0ad3c0e 944 Gene3D G3DSA:3.40.50.300 615 938 2.1E-141 T 11-10-2018 IX88_01255 95dc7f0d664aca6e3b311d82b0ad3c0e 944 Gene3D G3DSA:1.20.1580.10 92 493 2.0E-245 T 11-10-2018 IX88_04860 9324c8609684cf13d8784c6cbf6a51d7 188 Hamap MF_00045 Oligoribonuclease [orn]. 4 182 43.403 T 11-10-2018 IPR022894 Oligoribonuclease GO:0000175 IX88_04860 9324c8609684cf13d8784c6cbf6a51d7 188 Pfam PF00929 Exonuclease 10 170 5.4E-32 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III IX88_04860 9324c8609684cf13d8784c6cbf6a51d7 188 SMART SM00479 8 181 2.4E-19 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III IX88_04860 9324c8609684cf13d8784c6cbf6a51d7 188 SUPERFAMILY SSF53098 7 181 8.1E-46 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_04860 9324c8609684cf13d8784c6cbf6a51d7 188 Gene3D G3DSA:3.30.420.10 1 188 4.5E-75 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IX88_14665 48dc5074a31554e604f7f445a25d30d2 460 SUPERFAMILY SSF51735 197 373 3.95E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_14665 48dc5074a31554e604f7f445a25d30d2 460 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 197 372 3.3E-58 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 IX88_14665 48dc5074a31554e604f7f445a25d30d2 460 SMART SM00996 10 459 1.4E-277 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 IX88_14665 48dc5074a31554e604f7f445a25d30d2 460 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 452 2.4E-158 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 IX88_14665 48dc5074a31554e604f7f445a25d30d2 460 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 IX88_14665 48dc5074a31554e604f7f445a25d30d2 460 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 219 235 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 IX88_14665 48dc5074a31554e604f7f445a25d30d2 460 SMART SM00997 197 372 1.6E-85 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 IX88_14665 48dc5074a31554e604f7f445a25d30d2 460 Gene3D G3DSA:3.40.50.1480 370 460 8.2E-32 T 11-10-2018 IX88_14665 48dc5074a31554e604f7f445a25d30d2 460 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 452 45.468 T 11-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 IX88_14665 48dc5074a31554e604f7f445a25d30d2 460 SUPERFAMILY SSF52283 8 460 6.23E-110 T 11-10-2018 IX88_14665 48dc5074a31554e604f7f445a25d30d2 460 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 10 147 1.8E-72 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 IX88_14665 48dc5074a31554e604f7f445a25d30d2 460 Gene3D G3DSA:3.40.50.720 204 369 2.4E-68 T 11-10-2018 IX88_14665 48dc5074a31554e604f7f445a25d30d2 460 Gene3D G3DSA:3.40.50.1480 8 203 8.3E-92 T 11-10-2018 IX88_14665 48dc5074a31554e604f7f445a25d30d2 460 PIRSF PIRSF001109 1 460 4.3E-180 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 IX88_02995 eaced9abc596351ccdbea9d223daa5da 596 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 596 25.061 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 IX88_02995 eaced9abc596351ccdbea9d223daa5da 596 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 91 3.8E-21 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 IX88_02995 eaced9abc596351ccdbea9d223daa5da 596 SUPERFAMILY SSF47323 470 596 4.25E-34 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_02995 eaced9abc596351ccdbea9d223daa5da 596 Gene3D G3DSA:1.10.730.10 470 596 1.7E-34 T 11-10-2018 IX88_02995 eaced9abc596351ccdbea9d223daa5da 596 Pfam PF00750 tRNA synthetases class I (R) 221 444 7.3E-12 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 IX88_02995 eaced9abc596351ccdbea9d223daa5da 596 Pfam PF00750 tRNA synthetases class I (R) 102 177 2.5E-10 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 IX88_02995 eaced9abc596351ccdbea9d223daa5da 596 SUPERFAMILY SSF55190 19 111 1.96E-22 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 IX88_02995 eaced9abc596351ccdbea9d223daa5da 596 SMART SM01016 3 91 1.3E-33 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 IX88_02995 eaced9abc596351ccdbea9d223daa5da 596 Gene3D G3DSA:3.30.1360.70 1 111 1.6E-23 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 IX88_02995 eaced9abc596351ccdbea9d223daa5da 596 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 6 596 6.1E-130 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 IX88_02995 eaced9abc596351ccdbea9d223daa5da 596 SUPERFAMILY SSF52374 116 485 6.7E-81 T 11-10-2018 IX88_02995 eaced9abc596351ccdbea9d223daa5da 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 159 172 2.5E-19 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 IX88_02995 eaced9abc596351ccdbea9d223daa5da 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 135 2.5E-19 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 IX88_02995 eaced9abc596351ccdbea9d223daa5da 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 135 151 2.5E-19 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 IX88_02995 eaced9abc596351ccdbea9d223daa5da 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 344 365 2.5E-19 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 IX88_02995 eaced9abc596351ccdbea9d223daa5da 596 SMART SM00836 475 596 2.1E-53 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 IX88_02995 eaced9abc596351ccdbea9d223daa5da 596 Pfam PF05746 DALR anticodon binding domain 475 596 8.6E-34 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 IX88_01310 bed23f157071135a429fc19c6f3588fe 370 Gene3D G3DSA:3.20.20.30 4 359 2.4E-105 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 IX88_01310 bed23f157071135a429fc19c6f3588fe 370 Pfam PF00296 Luciferase-like monooxygenase 9 328 2.6E-70 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 IX88_01310 bed23f157071135a429fc19c6f3588fe 370 TIGRFAM TIGR04021 LLM_DMSO2_sfnG: dimethyl sulfone monooxygenase SfnG 8 356 7.3E-184 T 11-10-2018 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG KEGG: 00920+1.14.14.35|MetaCyc: PWY-6059 IX88_01310 bed23f157071135a429fc19c6f3588fe 370 SUPERFAMILY SSF51679 5 357 1.31E-87 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 IX88_15265 c93e99cf2437a0ac7e5fbe6b719fee01 228 SUPERFAMILY SSF51182 4 227 3.35E-62 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_15265 c93e99cf2437a0ac7e5fbe6b719fee01 228 Pfam PF02678 Pirin 13 119 2.9E-30 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 IX88_15265 c93e99cf2437a0ac7e5fbe6b719fee01 228 Gene3D G3DSA:2.60.120.10 12 135 5.0E-77 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_15265 c93e99cf2437a0ac7e5fbe6b719fee01 228 Gene3D G3DSA:2.60.120.10 9 228 5.0E-77 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_15265 c93e99cf2437a0ac7e5fbe6b719fee01 228 PIRSF PIRSF006232 1 226 1.9E-46 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 IX88_14290 81a685bfef81082f2b27ef3b1d6f802b 151 Gene3D G3DSA:3.40.50.1240 1 145 3.2E-30 T 11-10-2018 IPR029033 Histidine phosphatase superfamily IX88_14290 81a685bfef81082f2b27ef3b1d6f802b 151 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 76 4.3E-13 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 IX88_14290 81a685bfef81082f2b27ef3b1d6f802b 151 SUPERFAMILY SSF53254 1 121 3.68E-21 T 11-10-2018 IPR029033 Histidine phosphatase superfamily IX88_14290 81a685bfef81082f2b27ef3b1d6f802b 151 SMART SM00855 2 111 1.5E-10 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 IX88_10080 1db71d4175c103e86e448095b91a1603 157 SUPERFAMILY SSF46785 2 132 3.67E-38 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_10080 1db71d4175c103e86e448095b91a1603 157 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site IX88_10080 1db71d4175c103e86e448095b91a1603 157 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 2.9E-46 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type IX88_10080 1db71d4175c103e86e448095b91a1603 157 Pfam PF02082 Transcriptional regulator 1 83 5.4E-31 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type IX88_10080 1db71d4175c103e86e448095b91a1603 157 Gene3D G3DSA:1.10.10.10 1 144 5.6E-53 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_14325 5c54d4a4597b8a669ba4d85f5146ccf6 288 Pfam PF04545 Sigma-70, region 4 232 282 7.8E-15 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 IX88_14325 5c54d4a4597b8a669ba4d85f5146ccf6 288 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 5 287 52.265 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 IX88_14325 5c54d4a4597b8a669ba4d85f5146ccf6 288 PIRSF PIRSF000770 12 288 2.4E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IX88_14325 5c54d4a4597b8a669ba4d85f5146ccf6 288 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 19 286 7.1E-124 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 IX88_14325 5c54d4a4597b8a669ba4d85f5146ccf6 288 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 52 285 1.3E-32 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 IX88_14325 5c54d4a4597b8a669ba4d85f5146ccf6 288 Gene3D G3DSA:1.10.10.10 211 287 7.6E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_14325 5c54d4a4597b8a669ba4d85f5146ccf6 288 PRINTS PR00046 Major sigma-70 factor signature 255 270 9.6E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IX88_14325 5c54d4a4597b8a669ba4d85f5146ccf6 288 PRINTS PR00046 Major sigma-70 factor signature 236 248 9.6E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IX88_14325 5c54d4a4597b8a669ba4d85f5146ccf6 288 PRINTS PR00046 Major sigma-70 factor signature 270 281 9.6E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IX88_14325 5c54d4a4597b8a669ba4d85f5146ccf6 288 PRINTS PR00046 Major sigma-70 factor signature 81 94 9.6E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IX88_14325 5c54d4a4597b8a669ba4d85f5146ccf6 288 Pfam PF04542 Sigma-70 region 2 57 126 2.7E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 IX88_14325 5c54d4a4597b8a669ba4d85f5146ccf6 288 SUPERFAMILY SSF88946 19 126 5.49E-40 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 IX88_14325 5c54d4a4597b8a669ba4d85f5146ccf6 288 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 81 94 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IX88_14325 5c54d4a4597b8a669ba4d85f5146ccf6 288 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 255 281 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IX88_14325 5c54d4a4597b8a669ba4d85f5146ccf6 288 Pfam PF00140 Sigma-70 factor, region 1.2 20 44 1.1E-5 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 IX88_14325 5c54d4a4597b8a669ba4d85f5146ccf6 288 SUPERFAMILY SSF88659 200 285 5.61E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like IX88_14325 5c54d4a4597b8a669ba4d85f5146ccf6 288 Gene3D G3DSA:1.20.120.1810 19 126 2.0E-27 T 11-10-2018 IX88_17305 f0cf065e1fc136431d411893930d843d 240 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 115 179 8.7E-22 T 11-10-2018 IPR017703 YgfZ/GcvT conserved site IX88_17305 f0cf065e1fc136431d411893930d843d 240 Pfam PF01571 Aminomethyltransferase folate-binding domain 6 83 1.1E-6 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain IX88_17305 f0cf065e1fc136431d411893930d843d 240 Gene3D G3DSA:3.30.70.1400 9 92 1.6E-20 T 11-10-2018 IX88_17305 f0cf065e1fc136431d411893930d843d 240 Gene3D G3DSA:2.40.30.160 124 228 9.3E-20 T 11-10-2018 IX88_17305 f0cf065e1fc136431d411893930d843d 240 SUPERFAMILY SSF103025 8 167 2.83E-34 T 11-10-2018 IX88_17305 f0cf065e1fc136431d411893930d843d 240 PIRSF PIRSF006487 3 154 2.5E-6 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 IX88_17305 f0cf065e1fc136431d411893930d843d 240 PIRSF PIRSF006487 94 233 29.0 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 IX88_06080 24bcf5f51ed54c148600a5f39c17203e 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_06080 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.6E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06080 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.6E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06080 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.6E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06080 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.6E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06080 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.6E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06080 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.6E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06080 24bcf5f51ed54c148600a5f39c17203e 244 Gene3D G3DSA:3.40.50.720 1 244 6.4E-83 T 11-10-2018 IX88_06080 24bcf5f51ed54c148600a5f39c17203e 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 1.0E-5 T 11-10-2018 IX88_06080 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 4.2E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06080 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 4.2E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06080 24bcf5f51ed54c148600a5f39c17203e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.2E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06080 24bcf5f51ed54c148600a5f39c17203e 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.0E-95 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 IX88_06080 24bcf5f51ed54c148600a5f39c17203e 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 1.1E-66 T 11-10-2018 IX88_06080 24bcf5f51ed54c148600a5f39c17203e 244 SUPERFAMILY SSF51735 5 243 1.29E-84 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_00915 b9f94d2780105d2b63db548f33072337 485 SMART SM00304 206 259 5.8E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 IX88_00915 b9f94d2780105d2b63db548f33072337 485 Pfam PF00672 HAMP domain 206 251 1.3E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 IX88_00915 b9f94d2780105d2b63db548f33072337 485 SMART SM00388 260 318 9.3E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_00915 b9f94d2780105d2b63db548f33072337 485 Gene3D G3DSA:3.30.565.10 320 467 3.3E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_00915 b9f94d2780105d2b63db548f33072337 485 Gene3D G3DSA:1.10.287.130 203 313 3.8E-20 T 11-10-2018 IX88_00915 b9f94d2780105d2b63db548f33072337 485 SMART SM00387 354 462 8.5E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_00915 b9f94d2780105d2b63db548f33072337 485 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 310 2.0E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_00915 b9f94d2780105d2b63db548f33072337 485 SUPERFAMILY SSF47384 244 316 6.67E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IX88_00915 b9f94d2780105d2b63db548f33072337 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 1.9E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_00915 b9f94d2780105d2b63db548f33072337 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 459 1.9E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_00915 b9f94d2780105d2b63db548f33072337 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.9E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_00915 b9f94d2780105d2b63db548f33072337 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.9E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_00915 b9f94d2780105d2b63db548f33072337 485 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 460 4.3E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_00915 b9f94d2780105d2b63db548f33072337 485 SUPERFAMILY SSF55874 316 462 3.93E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_04675 ef76d6289ece616006f0d35351407f5a 762 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 160 5.8E-19 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_04675 ef76d6289ece616006f0d35351407f5a 762 Pfam PF00593 TonB dependent receptor 236 761 3.0E-53 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_04675 ef76d6289ece616006f0d35351407f5a 762 Gene3D G3DSA:2.40.170.20 176 762 3.8E-133 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IX88_04675 ef76d6289ece616006f0d35351407f5a 762 SUPERFAMILY SSF56935 25 762 1.15E-123 T 11-10-2018 IX88_04675 ef76d6289ece616006f0d35351407f5a 762 Gene3D G3DSA:2.170.130.10 44 172 3.2E-38 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_04675 ef76d6289ece616006f0d35351407f5a 762 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 64 761 1.3E-89 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 IX88_07160 a634b7216b2608a1b989c4529bbb5ee1 369 Gene3D G3DSA:2.40.128.270 19 147 3.9E-13 T 11-10-2018 IPR038670 HslJ-like superfamily IX88_07160 a634b7216b2608a1b989c4529bbb5ee1 369 Gene3D G3DSA:2.40.128.270 148 261 6.9E-12 T 11-10-2018 IPR038670 HslJ-like superfamily IX88_07160 a634b7216b2608a1b989c4529bbb5ee1 369 Pfam PF03724 META domain 160 254 9.5E-15 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ IX88_07160 a634b7216b2608a1b989c4529bbb5ee1 369 Pfam PF03724 META domain 44 128 8.6E-17 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ IX88_07160 a634b7216b2608a1b989c4529bbb5ee1 369 Pfam PF14302 Domain of unknown function (DUF4377) 277 361 4.5E-22 T 11-10-2018 IPR025485 Domain of unknown function DUF4377 IX88_11585 f69652d949923fcb488065917d0baf5b 483 Pfam PF13229 Right handed beta helix region 121 253 2.2E-11 T 11-10-2018 IPR039448 Right handed beta helix domain IX88_11585 f69652d949923fcb488065917d0baf5b 483 SMART SM00710 157 180 1.3 T 11-10-2018 IPR006626 Parallel beta-helix repeat IX88_11585 f69652d949923fcb488065917d0baf5b 483 SMART SM00710 312 351 7000.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat IX88_11585 f69652d949923fcb488065917d0baf5b 483 SMART SM00710 135 156 1000.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat IX88_11585 f69652d949923fcb488065917d0baf5b 483 SMART SM00710 265 285 5600.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat IX88_11585 f69652d949923fcb488065917d0baf5b 483 SMART SM00710 192 213 93.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat IX88_11585 f69652d949923fcb488065917d0baf5b 483 SMART SM00710 286 307 110.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat IX88_11585 f69652d949923fcb488065917d0baf5b 483 SMART SM00710 243 263 3700.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat IX88_11585 f69652d949923fcb488065917d0baf5b 483 Gene3D G3DSA:2.160.20.10 66 336 1.2E-13 T 11-10-2018 IPR012334 Pectin lyase fold IX88_11585 f69652d949923fcb488065917d0baf5b 483 SUPERFAMILY SSF51126 9 338 2.06E-31 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor IX88_02860 6b666b42f8ded8b230dc129b3258fa59 238 SUPERFAMILY SSF75516 4 165 1.09E-42 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily IX88_02860 6b666b42f8ded8b230dc129b3258fa59 238 ProSitePatterns PS00622 LuxR-type HTH domain signature. 192 219 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_02860 6b666b42f8ded8b230dc129b3258fa59 238 Pfam PF00196 Bacterial regulatory proteins, luxR family 178 231 1.4E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_02860 6b666b42f8ded8b230dc129b3258fa59 238 SMART SM00421 175 232 2.0E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_02860 6b666b42f8ded8b230dc129b3258fa59 238 Pfam PF03472 Autoinducer binding domain 19 160 5.2E-39 T 11-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain IX88_02860 6b666b42f8ded8b230dc129b3258fa59 238 SUPERFAMILY SSF46894 172 238 9.52E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 IX88_02860 6b666b42f8ded8b230dc129b3258fa59 238 Gene3D G3DSA:1.10.10.10 172 238 5.9E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_02860 6b666b42f8ded8b230dc129b3258fa59 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 192 2.7E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_02860 6b666b42f8ded8b230dc129b3258fa59 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 208 2.7E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_02860 6b666b42f8ded8b230dc129b3258fa59 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 208 220 2.7E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_02860 6b666b42f8ded8b230dc129b3258fa59 238 Gene3D G3DSA:3.30.450.80 3 169 2.8E-55 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily IX88_16290 2c54e2265ef17e615a30adde324c6302 138 SMART SM00422 1 69 4.1E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_16290 2c54e2265ef17e615a30adde324c6302 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.0E-4 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_16290 2c54e2265ef17e615a30adde324c6302 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.0E-4 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_16290 2c54e2265ef17e615a30adde324c6302 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 1.0E-4 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_16290 2c54e2265ef17e615a30adde324c6302 138 SUPERFAMILY SSF46955 2 117 5.13E-23 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily IX88_16290 2c54e2265ef17e615a30adde324c6302 138 Gene3D G3DSA:1.10.1660.10 1 122 7.6E-25 T 11-10-2018 IX88_16290 2c54e2265ef17e615a30adde324c6302 138 Pfam PF13411 MerR HTH family regulatory protein 2 67 1.2E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 Gene3D G3DSA:2.40.50.140 624 696 3.4E-29 T 11-10-2018 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 Pfam PF01138 3' exoribonuclease family, domain 1 326 458 5.8E-20 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 Pfam PF01138 3' exoribonuclease family, domain 1 18 145 1.0E-18 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 SUPERFAMILY SSF55666 452 550 2.38E-28 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 Pfam PF00575 S1 RNA binding domain 621 692 6.0E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 SUPERFAMILY SSF50249 622 695 1.64E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 SMART SM00316 622 692 3.5E-26 T 11-10-2018 IPR022967 RNA-binding domain, S1 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 SUPERFAMILY SSF54791 558 642 4.55E-23 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 693 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 PIRSF PIRSF005499 3 697 6.8E-284 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 322 8.2E-21 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 Gene3D G3DSA:3.30.230.70 233 551 9.2E-111 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 Gene3D G3DSA:3.30.230.70 1 231 6.8E-75 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 Gene3D G3DSA:3.30.1370.10 552 623 9.7E-20 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 695 29.772 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 SUPERFAMILY SSF46915 240 323 9.68E-18 T 11-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 Pfam PF00013 KH domain 559 615 2.1E-12 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 SUPERFAMILY SSF54211 3 145 1.16E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 SUPERFAMILY SSF54211 299 490 4.1E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 SUPERFAMILY SSF55666 146 236 4.77E-30 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 Pfam PF03725 3' exoribonuclease family, domain 2 461 529 1.7E-5 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 4.2E-14 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IX88_04100 b9aebe34a759f1a590eb5a8f88cf6c04 697 SMART SM00322 554 619 3.5E-13 T 11-10-2018 IPR004087 K Homology domain GO:0003676 IX88_13460 b55da50a5369a75ba81468209d9cc74c 626 SUPERFAMILY SSF51905 7 261 5.07E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_13460 b55da50a5369a75ba81468209d9cc74c 626 SMART SM01228 543 614 1.5E-42 T 11-10-2018 IX88_13460 b55da50a5369a75ba81468209d9cc74c 626 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 621 41.838 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 IX88_13460 b55da50a5369a75ba81468209d9cc74c 626 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 IX88_13460 b55da50a5369a75ba81468209d9cc74c 626 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 IX88_13460 b55da50a5369a75ba81468209d9cc74c 626 Gene3D G3DSA:3.50.50.60 2 228 1.4E-87 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_13460 b55da50a5369a75ba81468209d9cc74c 626 Gene3D G3DSA:3.50.50.60 301 458 1.4E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_13460 b55da50a5369a75ba81468209d9cc74c 626 Pfam PF13932 GidA associated domain 402 612 2.7E-75 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 IX88_13460 b55da50a5369a75ba81468209d9cc74c 626 Gene3D G3DSA:1.10.150.570 566 619 6.9E-23 T 11-10-2018 IX88_13460 b55da50a5369a75ba81468209d9cc74c 626 Gene3D G3DSA:1.10.10.1800 459 547 6.1E-23 T 11-10-2018 IX88_13460 b55da50a5369a75ba81468209d9cc74c 626 Pfam PF01134 Glucose inhibited division protein A 8 398 7.2E-165 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 IX88_13460 b55da50a5369a75ba81468209d9cc74c 626 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 618 8.1E-274 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 54 68 6.3E-30 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 92 106 6.3E-30 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 78 92 6.3E-30 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 114 133 6.3E-30 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 139 148 6.3E-30 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 190 198 6.3E-30 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 32 42 6.3E-30 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 Pfam PF00175 Oxidoreductase NAD-binding domain 115 203 1.5E-8 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 Gene3D G3DSA:3.40.50.80 104 222 3.9E-26 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 267 275 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 SUPERFAMILY SSF54292 214 316 8.65E-26 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 Gene3D G3DSA:3.10.20.30 223 318 2.5E-24 T 11-10-2018 IPR012675 Beta-grasp domain superfamily IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 Hamap MF_02098 Carnitine monooxygenase reductase subunit. 8 318 83.126 T 11-10-2018 IPR039003 Carnitine monooxygenase reductase subunit GO:0009437 IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 Gene3D G3DSA:2.40.30.10 2 103 6.9E-22 T 11-10-2018 IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 Pfam PF00970 Oxidoreductase FAD-binding domain 10 101 1.4E-5 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 SUPERFAMILY SSF63380 4 102 2.5E-22 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 SUPERFAMILY SSF52343 100 227 8.12E-29 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_06260 71be7f1bb902991c51652c9f1ccc2190 318 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 240 309 3.9E-12 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 IX88_10590 59c78874ce6da225cc306c532b62b8b9 298 SUPERFAMILY SSF46785 3 114 8.39E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_10590 59c78874ce6da225cc306c532b62b8b9 298 Gene3D G3DSA:3.40.190.10 85 200 1.1E-6 T 11-10-2018 IX88_10590 59c78874ce6da225cc306c532b62b8b9 298 Gene3D G3DSA:1.10.10.10 1 84 6.6E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_10590 59c78874ce6da225cc306c532b62b8b9 298 Gene3D G3DSA:3.40.190.10 201 265 2.9E-5 T 11-10-2018 IX88_10590 59c78874ce6da225cc306c532b62b8b9 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.5E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_10590 59c78874ce6da225cc306c532b62b8b9 298 Pfam PF03466 LysR substrate binding domain 91 275 1.5E-20 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_10590 59c78874ce6da225cc306c532b62b8b9 298 SUPERFAMILY SSF53850 91 277 1.85E-19 T 11-10-2018 IX88_10435 0f3447994c2a28da02d835db288a3c5c 409 Gene3D G3DSA:3.30.70.270 220 399 7.9E-57 T 11-10-2018 IX88_10435 0f3447994c2a28da02d835db288a3c5c 409 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 232 398 5.6E-50 T 11-10-2018 IPR000160 GGDEF domain IX88_10435 0f3447994c2a28da02d835db288a3c5c 409 SMART SM00267 223 399 7.1E-69 T 11-10-2018 IPR000160 GGDEF domain IX88_10435 0f3447994c2a28da02d835db288a3c5c 409 SUPERFAMILY SSF55073 239 398 2.35E-49 T 11-10-2018 IPR029787 Nucleotide cyclase IX88_10435 0f3447994c2a28da02d835db288a3c5c 409 Pfam PF00990 Diguanylate cyclase, GGDEF domain 235 395 5.1E-50 T 11-10-2018 IPR000160 GGDEF domain IX88_08790 4d4ab7490ed71c5b90512533f14c80d3 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 8.5E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_08790 4d4ab7490ed71c5b90512533f14c80d3 313 Pfam PF03466 LysR substrate binding domain 95 298 3.5E-36 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_08790 4d4ab7490ed71c5b90512533f14c80d3 313 SUPERFAMILY SSF46785 11 118 5.44E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_08790 4d4ab7490ed71c5b90512533f14c80d3 313 SUPERFAMILY SSF53850 94 302 1.69E-41 T 11-10-2018 IX88_08790 4d4ab7490ed71c5b90512533f14c80d3 313 Gene3D G3DSA:1.10.10.10 9 95 9.6E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_08790 4d4ab7490ed71c5b90512533f14c80d3 313 Gene3D G3DSA:3.40.190.290 97 300 3.4E-57 T 11-10-2018 IX88_16230 07f6d06bf437f86344d1e59e131a5ed7 802 SUPERFAMILY SSF53706 60 644 2.62E-146 T 11-10-2018 IX88_16230 07f6d06bf437f86344d1e59e131a5ed7 802 Pfam PF01568 Molydopterin dinucleotide binding domain 665 772 2.5E-9 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 IX88_16230 07f6d06bf437f86344d1e59e131a5ed7 802 Gene3D G3DSA:3.40.228.10 207 436 6.8E-57 T 11-10-2018 IX88_16230 07f6d06bf437f86344d1e59e131a5ed7 802 Gene3D G3DSA:3.40.50.740 122 206 1.5E-7 T 11-10-2018 IX88_16230 07f6d06bf437f86344d1e59e131a5ed7 802 PIRSF PIRSF000144 5 781 0.0 T 11-10-2018 IX88_16230 07f6d06bf437f86344d1e59e131a5ed7 802 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 26 776 7.9E-287 T 11-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 IX88_16230 07f6d06bf437f86344d1e59e131a5ed7 802 Pfam PF00384 Molybdopterin oxidoreductase 122 503 6.5E-26 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_16230 07f6d06bf437f86344d1e59e131a5ed7 802 Gene3D G3DSA:3.40.50.740 437 516 1.6E-5 T 11-10-2018 IX88_16230 07f6d06bf437f86344d1e59e131a5ed7 802 SUPERFAMILY SSF50692 662 782 2.71E-14 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily IX88_17350 777d2000de0e983343968886e3cd8a83 117 Gene3D G3DSA:3.10.490.10 1 117 2.8E-19 T 11-10-2018 IX88_17350 777d2000de0e983343968886e3cd8a83 117 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 108 4.5E-13 T 11-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like IX88_17350 777d2000de0e983343968886e3cd8a83 117 SUPERFAMILY SSF110857 1 109 2.35E-17 T 11-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily IX88_05720 4d50e210b83355558b1dab0b1e8398ab 238 Gene3D G3DSA:1.10.10.10 130 238 7.8E-41 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_05720 4d50e210b83355558b1dab0b1e8398ab 238 SMART SM00862 155 231 2.8E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_05720 4d50e210b83355558b1dab0b1e8398ab 238 SUPERFAMILY SSF52172 8 130 3.42E-38 T 11-10-2018 IPR011006 CheY-like superfamily IX88_05720 4d50e210b83355558b1dab0b1e8398ab 238 SUPERFAMILY SSF46894 135 232 5.1E-28 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 IX88_05720 4d50e210b83355558b1dab0b1e8398ab 238 Gene3D G3DSA:3.40.50.2300 1 129 3.9E-37 T 11-10-2018 IX88_05720 4d50e210b83355558b1dab0b1e8398ab 238 Pfam PF00072 Response regulator receiver domain 10 119 1.1E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_05720 4d50e210b83355558b1dab0b1e8398ab 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 1.3E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_05720 4d50e210b83355558b1dab0b1e8398ab 238 SMART SM00448 8 118 6.1E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_13545 37c2e812ac438eed1699aba8c3e3df7a 303 SUPERFAMILY SSF103481 190 290 1.44E-5 T 11-10-2018 IX88_13545 37c2e812ac438eed1699aba8c3e3df7a 303 Pfam PF00892 EamA-like transporter family 158 286 2.3E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_13545 37c2e812ac438eed1699aba8c3e3df7a 303 SUPERFAMILY SSF103481 40 140 7.19E-6 T 11-10-2018 IX88_03085 e2c4128ff4378f961cde5219bb94a0e4 181 PIRSF PIRSF000303 1 181 5.2E-61 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 IX88_03085 e2c4128ff4378f961cde5219bb94a0e4 181 Gene3D G3DSA:3.40.30.10 1 181 1.4E-61 T 11-10-2018 IX88_03085 e2c4128ff4378f961cde5219bb94a0e4 181 PRINTS PR01011 Glutathione peroxidase family signature 23 40 1.7E-18 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 IX88_03085 e2c4128ff4378f961cde5219bb94a0e4 181 PRINTS PR01011 Glutathione peroxidase family signature 141 150 1.7E-18 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 IX88_03085 e2c4128ff4378f961cde5219bb94a0e4 181 PRINTS PR01011 Glutathione peroxidase family signature 58 74 1.7E-18 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 IX88_03085 e2c4128ff4378f961cde5219bb94a0e4 181 SUPERFAMILY SSF52833 3 180 1.18E-54 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_03085 e2c4128ff4378f961cde5219bb94a0e4 181 Pfam PF00255 Glutathione peroxidase 5 111 7.2E-40 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 IX88_03085 e2c4128ff4378f961cde5219bb94a0e4 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 IX88_09865 a1fbab74b1b69de9ae75652943e7703f 158 Gene3D G3DSA:3.40.140.10 1 158 1.6E-54 T 11-10-2018 IX88_09865 a1fbab74b1b69de9ae75652943e7703f 158 Pfam PF14437 MafB19-like deaminase 1 143 5.3E-30 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 IX88_09865 a1fbab74b1b69de9ae75652943e7703f 158 SUPERFAMILY SSF53927 1 147 1.58E-48 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 IX88_09865 a1fbab74b1b69de9ae75652943e7703f 158 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 46 84 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 IX88_09865 a1fbab74b1b69de9ae75652943e7703f 158 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 1 143 41.227 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 IX88_01450 de37b218201bfc1785698a571c42a836 284 Gene3D G3DSA:3.40.50.11690 130 258 2.2E-30 T 11-10-2018 IX88_01450 de37b218201bfc1785698a571c42a836 284 Pfam PF08478 POTRA domain, FtsQ-type 61 127 8.1E-13 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type IX88_01450 de37b218201bfc1785698a571c42a836 284 Pfam PF03799 Cell division protein FtsQ 132 245 5.8E-16 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB IX88_01450 de37b218201bfc1785698a571c42a836 284 Gene3D G3DSA:3.10.20.310 59 127 2.4E-12 T 11-10-2018 IX88_01450 de37b218201bfc1785698a571c42a836 284 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 32 253 22.355 T 11-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 IX88_05120 8838d3b2fae9d518dd4a3ea375668781 487 Gene3D G3DSA:1.10.3090.10 157 399 3.0E-68 T 11-10-2018 IX88_05120 8838d3b2fae9d518dd4a3ea375668781 487 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 3 441 33.824 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 IX88_05120 8838d3b2fae9d518dd4a3ea375668781 487 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 186 246 2.2E-11 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 IX88_05120 8838d3b2fae9d518dd4a3ea375668781 487 Gene3D G3DSA:3.30.460.10 2 155 7.1E-46 T 11-10-2018 IX88_05120 8838d3b2fae9d518dd4a3ea375668781 487 Pfam PF01743 Poly A polymerase head domain 34 159 1.0E-29 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 IX88_05120 8838d3b2fae9d518dd4a3ea375668781 487 SUPERFAMILY SSF81891 157 384 5.1E-38 T 11-10-2018 IX88_05120 8838d3b2fae9d518dd4a3ea375668781 487 Pfam PF12626 Polymerase A arginine-rich C-terminus 296 408 3.1E-29 T 11-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain IX88_05120 8838d3b2fae9d518dd4a3ea375668781 487 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 6 407 2.6E-117 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 IX88_05120 8838d3b2fae9d518dd4a3ea375668781 487 SUPERFAMILY SSF81301 10 156 2.29E-33 T 11-10-2018 IX88_09000 aaa3a7696eaa7542900e0523b05baf46 169 SUPERFAMILY SSF52821 42 166 7.96E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily IX88_09000 aaa3a7696eaa7542900e0523b05baf46 169 Pfam PF00581 Rhodanese-like domain 48 145 3.8E-13 T 11-10-2018 IPR001763 Rhodanese-like domain IX88_09000 aaa3a7696eaa7542900e0523b05baf46 169 Gene3D G3DSA:3.40.250.10 40 169 5.7E-35 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily IX88_09000 aaa3a7696eaa7542900e0523b05baf46 169 SMART SM00450 46 152 6.7E-14 T 11-10-2018 IPR001763 Rhodanese-like domain IX88_03305 8beb8a513dd78a62cc7d80a134d923d2 292 PIRSF PIRSF001365 1 292 2.2E-80 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_03305 8beb8a513dd78a62cc7d80a134d923d2 292 SUPERFAMILY SSF51569 1 290 5.55E-85 T 11-10-2018 IX88_03305 8beb8a513dd78a62cc7d80a134d923d2 292 Gene3D G3DSA:3.20.20.70 1 292 2.6E-97 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_03305 8beb8a513dd78a62cc7d80a134d923d2 292 Pfam PF00701 Dihydrodipicolinate synthetase family 3 289 5.0E-66 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_03305 8beb8a513dd78a62cc7d80a134d923d2 292 SMART SM01130 2 291 9.9E-95 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_03305 8beb8a513dd78a62cc7d80a134d923d2 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 4.0E-15 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_03305 8beb8a513dd78a62cc7d80a134d923d2 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 4.0E-15 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_03305 8beb8a513dd78a62cc7d80a134d923d2 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 4.0E-15 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_03305 8beb8a513dd78a62cc7d80a134d923d2 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 4.0E-15 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_05860 23e89fa4858683fe337862b0eb9a07e1 375 Pfam PF13533 Biotin-lipoyl like 82 125 6.1E-8 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain IX88_05860 23e89fa4858683fe337862b0eb9a07e1 375 Gene3D G3DSA:1.10.287.470 112 143 5.9E-11 T 11-10-2018 IX88_05860 23e89fa4858683fe337862b0eb9a07e1 375 Gene3D G3DSA:1.10.287.470 146 218 7.0E-6 T 11-10-2018 IX88_05860 23e89fa4858683fe337862b0eb9a07e1 375 SUPERFAMILY SSF111369 197 299 1.83E-10 T 11-10-2018 IX88_05860 23e89fa4858683fe337862b0eb9a07e1 375 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 90 110 4.4E-7 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 IX88_05860 23e89fa4858683fe337862b0eb9a07e1 375 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 361 375 4.4E-7 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 IX88_05860 23e89fa4858683fe337862b0eb9a07e1 375 Gene3D G3DSA:2.40.50.100 79 111 5.9E-11 T 11-10-2018 IX88_05860 23e89fa4858683fe337862b0eb9a07e1 375 Pfam PF13437 HlyD family secretion protein 245 364 1.4E-13 T 11-10-2018 IX88_05860 23e89fa4858683fe337862b0eb9a07e1 375 SUPERFAMILY SSF111369 82 160 8.5E-10 T 11-10-2018 IX88_05860 23e89fa4858683fe337862b0eb9a07e1 375 Gene3D G3DSA:2.40.30.170 260 375 1.4E-36 T 11-10-2018 IX88_15375 d515167a719dbaff94df5c134ea4971b 382 Gene3D G3DSA:3.40.710.10 17 271 9.4E-85 T 11-10-2018 IX88_15375 d515167a719dbaff94df5c134ea4971b 382 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 273 363 8.6E-25 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 IX88_15375 d515167a719dbaff94df5c134ea4971b 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 1.4E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 IX88_15375 d515167a719dbaff94df5c134ea4971b 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 57 68 1.4E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 IX88_15375 d515167a719dbaff94df5c134ea4971b 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 1.4E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 IX88_15375 d515167a719dbaff94df5c134ea4971b 382 SMART SM00936 273 363 3.4E-33 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 IX88_15375 d515167a719dbaff94df5c134ea4971b 382 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 24 252 1.1E-77 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 IX88_15375 d515167a719dbaff94df5c134ea4971b 382 SUPERFAMILY SSF69189 273 365 1.29E-25 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 IX88_15375 d515167a719dbaff94df5c134ea4971b 382 Gene3D G3DSA:2.60.410.10 273 363 1.8E-29 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 IX88_15375 d515167a719dbaff94df5c134ea4971b 382 SUPERFAMILY SSF56601 4 273 5.64E-78 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like IX88_07030 bca19354ffbca8b9370ab6386d206b05 182 Pfam PF09998 Uncharacterized protein conserved in bacteria (DUF2239) 6 175 2.6E-54 T 11-10-2018 IPR018715 Protein of unknown function DUF2239 IX88_18130 0f3ca8cc73f4293b819e0adbf4abaf1e 304 SUPERFAMILY SSF103481 45 146 7.06E-12 T 11-10-2018 IX88_18130 0f3ca8cc73f4293b819e0adbf4abaf1e 304 SUPERFAMILY SSF103481 200 299 5.23E-12 T 11-10-2018 IX88_18130 0f3ca8cc73f4293b819e0adbf4abaf1e 304 Pfam PF00892 EamA-like transporter family 13 143 4.0E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_18130 0f3ca8cc73f4293b819e0adbf4abaf1e 304 Pfam PF00892 EamA-like transporter family 160 295 5.8E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_05900 b9910cbd83400373cbe104c8048981b3 290 Gene3D G3DSA:3.40.50.1580 41 287 3.3E-72 T 11-10-2018 IX88_05900 b9910cbd83400373cbe104c8048981b3 290 SUPERFAMILY SSF53167 44 265 2.72E-44 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 IX88_05900 b9910cbd83400373cbe104c8048981b3 290 Pfam PF01048 Phosphorylase superfamily 44 260 1.7E-39 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 IX88_08215 949ec8a2de7583cf8c7110d81209de61 223 Pfam PF00717 Peptidase S24-like 139 204 5.9E-9 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C IX88_08215 949ec8a2de7583cf8c7110d81209de61 223 Gene3D G3DSA:2.10.109.10 100 222 3.6E-14 T 11-10-2018 IX88_08215 949ec8a2de7583cf8c7110d81209de61 223 SUPERFAMILY SSF47413 2 64 9.57E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IX88_08215 949ec8a2de7583cf8c7110d81209de61 223 Gene3D G3DSA:1.10.260.40 2 70 1.1E-17 T 11-10-2018 IX88_08215 949ec8a2de7583cf8c7110d81209de61 223 SMART SM00530 6 60 7.8E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IX88_08215 949ec8a2de7583cf8c7110d81209de61 223 Pfam PF12844 Helix-turn-helix domain 6 64 2.3E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IX88_08215 949ec8a2de7583cf8c7110d81209de61 223 SUPERFAMILY SSF51306 99 220 4.53E-18 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily IX88_08390 cab305f6131d803784eac698c252f997 881 SMART SM00533 293 604 9.5E-99 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 IX88_08390 cab305f6131d803784eac698c252f997 881 Pfam PF05190 MutS family domain IV 441 531 2.7E-31 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 IX88_08390 cab305f6131d803784eac698c252f997 881 Gene3D G3DSA:3.40.50.300 581 880 7.2E-98 T 11-10-2018 IX88_08390 cab305f6131d803784eac698c252f997 881 SUPERFAMILY SSF52540 580 810 1.86E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_08390 cab305f6131d803784eac698c252f997 881 Pfam PF00488 MutS domain V 624 808 2.1E-80 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 IX88_08390 cab305f6131d803784eac698c252f997 881 Gene3D G3DSA:1.10.1420.10 277 572 7.1E-97 T 11-10-2018 IX88_08390 cab305f6131d803784eac698c252f997 881 Gene3D G3DSA:3.40.1170.10 5 126 5.4E-49 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 IX88_08390 cab305f6131d803784eac698c252f997 881 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 13 871 24.109 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 IX88_08390 cab305f6131d803784eac698c252f997 881 Pfam PF01624 MutS domain I 14 124 3.0E-41 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 IX88_08390 cab305f6131d803784eac698c252f997 881 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 13 876 0.0 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 IX88_08390 cab305f6131d803784eac698c252f997 881 Gene3D G3DSA:1.10.1420.10 400 516 7.1E-97 T 11-10-2018 IX88_08390 cab305f6131d803784eac698c252f997 881 Pfam PF05192 MutS domain III 281 572 5.7E-36 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 IX88_08390 cab305f6131d803784eac698c252f997 881 PIRSF PIRSF037677 7 853 2.8E-148 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 IX88_08390 cab305f6131d803784eac698c252f997 881 Gene3D G3DSA:3.30.420.110 134 272 2.3E-35 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 IX88_08390 cab305f6131d803784eac698c252f997 881 SUPERFAMILY SSF55271 7 120 6.93E-40 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 IX88_08390 cab305f6131d803784eac698c252f997 881 SMART SM00534 620 806 1.3E-111 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 IX88_08390 cab305f6131d803784eac698c252f997 881 Pfam PF05188 MutS domain II 141 264 2.6E-21 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 IX88_08390 cab305f6131d803784eac698c252f997 881 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 701 717 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 IX88_08390 cab305f6131d803784eac698c252f997 881 SUPERFAMILY SSF53150 119 277 3.79E-37 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 IX88_08390 cab305f6131d803784eac698c252f997 881 SUPERFAMILY SSF48334 278 579 2.35E-83 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily IX88_00105 80c69eefd9fdc59ce0e2e2d53c7551b2 178 SUPERFAMILY SSF55282 3 178 2.59E-77 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00105 80c69eefd9fdc59ce0e2e2d53c7551b2 178 Gene3D G3DSA:3.30.1440.10 1 178 3.1E-79 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00105 80c69eefd9fdc59ce0e2e2d53c7551b2 178 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.1E-42 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00105 80c69eefd9fdc59ce0e2e2d53c7551b2 178 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 178 42.334 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00105 80c69eefd9fdc59ce0e2e2d53c7551b2 178 Pfam PF00281 Ribosomal protein L5 24 80 1.4E-27 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00105 80c69eefd9fdc59ce0e2e2d53c7551b2 178 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00105 80c69eefd9fdc59ce0e2e2d53c7551b2 178 PIRSF PIRSF002161 1 178 2.8E-67 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_16335 951e8c2a3018356d1424043a68c0c2c7 346 Pfam PF06067 Domain of unknown function (DUF932) 77 326 7.8E-78 T 11-10-2018 IPR026325 Protein of unknown function DUF932 IX88_16335 951e8c2a3018356d1424043a68c0c2c7 346 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 6 342 9.1E-119 T 11-10-2018 IPR017686 Phage/plasmid-like protein IX88_11950 1a6acf2d6251f4bda3840e0d47ace92c 147 PIRSF PIRSF006276 1 147 5.2E-21 T 11-10-2018 IPR006015 Universal stress protein A IX88_11950 1a6acf2d6251f4bda3840e0d47ace92c 147 Pfam PF00582 Universal stress protein family 3 145 3.0E-31 T 11-10-2018 IPR006016 UspA IX88_11950 1a6acf2d6251f4bda3840e0d47ace92c 147 PRINTS PR01438 Universal stress protein signature 124 146 3.7E-17 T 11-10-2018 IPR006015 Universal stress protein A IX88_11950 1a6acf2d6251f4bda3840e0d47ace92c 147 PRINTS PR01438 Universal stress protein signature 106 118 3.7E-17 T 11-10-2018 IPR006015 Universal stress protein A IX88_11950 1a6acf2d6251f4bda3840e0d47ace92c 147 PRINTS PR01438 Universal stress protein signature 3 21 3.7E-17 T 11-10-2018 IPR006015 Universal stress protein A IX88_11950 1a6acf2d6251f4bda3840e0d47ace92c 147 Gene3D G3DSA:3.40.50.620 1 146 2.7E-41 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_11950 1a6acf2d6251f4bda3840e0d47ace92c 147 SUPERFAMILY SSF52402 1 145 7.79E-40 T 11-10-2018 IX88_11260 338435bdcdb11b8bb9e36489bddd45fe 2141 SMART SM00912 98 217 9.5E-34 T 11-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal IX88_11260 338435bdcdb11b8bb9e36489bddd45fe 2141 SUPERFAMILY SSF51126 98 410 3.45E-40 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor IX88_11260 338435bdcdb11b8bb9e36489bddd45fe 2141 Pfam PF05860 haemagglutination activity domain 90 216 1.1E-23 T 11-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal IX88_11260 338435bdcdb11b8bb9e36489bddd45fe 2141 Gene3D G3DSA:2.160.20.10 91 387 2.3E-86 T 11-10-2018 IPR012334 Pectin lyase fold IX88_11260 338435bdcdb11b8bb9e36489bddd45fe 2141 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 25 1.6E-7 T 11-10-2018 IPR024973 ESPR domain IX88_11260 338435bdcdb11b8bb9e36489bddd45fe 2141 Pfam PF04830 Possible hemagglutinin (DUF637) 1652 1804 4.8E-33 T 11-10-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative IX88_11260 338435bdcdb11b8bb9e36489bddd45fe 2141 Pfam PF04829 Pre-toxin domain with VENN motif 1824 1866 1.7E-6 T 11-10-2018 IPR006914 VENN motif-containing domain IX88_11260 338435bdcdb11b8bb9e36489bddd45fe 2141 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 115 212 8.9E-19 T 11-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal IX88_05735 e2970f59102b5d424be36441ed163160 473 Pfam PF00990 Diguanylate cyclase, GGDEF domain 310 468 2.7E-44 T 11-10-2018 IPR000160 GGDEF domain IX88_05735 e2970f59102b5d424be36441ed163160 473 SMART SM00267 298 472 3.0E-54 T 11-10-2018 IPR000160 GGDEF domain IX88_05735 e2970f59102b5d424be36441ed163160 473 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 305 471 7.9E-47 T 11-10-2018 IPR000160 GGDEF domain IX88_05735 e2970f59102b5d424be36441ed163160 473 SUPERFAMILY SSF55073 314 471 3.22E-44 T 11-10-2018 IPR029787 Nucleotide cyclase IX88_05735 e2970f59102b5d424be36441ed163160 473 Gene3D G3DSA:3.30.70.270 298 472 1.7E-51 T 11-10-2018 IX88_17825 58898af5f22388314e785a0ff405fac6 145 Gene3D G3DSA:2.20.28.140 1 33 4.0E-13 T 11-10-2018 IX88_17825 58898af5f22388314e785a0ff405fac6 145 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 IX88_17825 58898af5f22388314e785a0ff405fac6 145 SUPERFAMILY SSF52833 22 140 3.35E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_17825 58898af5f22388314e785a0ff405fac6 145 PIRSF PIRSF000077 35 139 1.9E-31 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 IX88_17825 58898af5f22388314e785a0ff405fac6 145 TIGRFAM TIGR01068 thioredoxin: thioredoxin 41 138 3.1E-31 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 IX88_17825 58898af5f22388314e785a0ff405fac6 145 Pfam PF00085 Thioredoxin 38 137 4.8E-28 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 IX88_17825 58898af5f22388314e785a0ff405fac6 145 Gene3D G3DSA:3.40.30.10 37 142 1.3E-30 T 11-10-2018 IX88_17825 58898af5f22388314e785a0ff405fac6 145 PRINTS PR00421 Thioredoxin family signature 103 114 7.2E-7 T 11-10-2018 IX88_17825 58898af5f22388314e785a0ff405fac6 145 PRINTS PR00421 Thioredoxin family signature 64 73 7.2E-7 T 11-10-2018 IX88_17825 58898af5f22388314e785a0ff405fac6 145 PRINTS PR00421 Thioredoxin family signature 56 64 7.2E-7 T 11-10-2018 IX88_00235 d173adbf5ff81d6e87b8543ac90d11ea 681 Gene3D G3DSA:2.40.50.140 40 133 1.8E-9 T 11-10-2018 IX88_00235 d173adbf5ff81d6e87b8543ac90d11ea 681 Pfam PF00271 Helicase conserved C-terminal domain 466 576 4.0E-17 T 11-10-2018 IPR001650 Helicase, C-terminal IX88_00235 d173adbf5ff81d6e87b8543ac90d11ea 681 Gene3D G3DSA:3.40.50.300 446 618 2.1E-54 T 11-10-2018 IX88_00235 d173adbf5ff81d6e87b8543ac90d11ea 681 SUPERFAMILY SSF52540 282 639 1.36E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_00235 d173adbf5ff81d6e87b8543ac90d11ea 681 Pfam PF00270 DEAD/DEAH box helicase 262 422 2.1E-18 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 IX88_00235 d173adbf5ff81d6e87b8543ac90d11ea 681 SUPERFAMILY SSF52540 192 442 2.48E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_00235 d173adbf5ff81d6e87b8543ac90d11ea 681 Pfam PF17191 RecG wedge domain 6 163 2.1E-21 T 11-10-2018 IPR033454 RecG, wedge domain IX88_00235 d173adbf5ff81d6e87b8543ac90d11ea 681 SUPERFAMILY SSF50249 2 166 5.23E-33 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_00235 d173adbf5ff81d6e87b8543ac90d11ea 681 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 22 651 5.5E-230 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 IX88_00235 d173adbf5ff81d6e87b8543ac90d11ea 681 SMART SM00487 255 448 4.8E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain IX88_00235 d173adbf5ff81d6e87b8543ac90d11ea 681 SMART SM00490 493 577 8.6E-22 T 11-10-2018 IPR001650 Helicase, C-terminal IX88_00235 d173adbf5ff81d6e87b8543ac90d11ea 681 Gene3D G3DSA:3.40.50.300 198 439 9.2E-84 T 11-10-2018 IX88_16690 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 Pfam PF00364 Biotin-requiring enzyme 4 75 1.7E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment IX88_16690 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 397 2.4E-177 T 11-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 IX88_16690 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 Gene3D G3DSA:2.40.50.100 1 102 7.9E-20 T 11-10-2018 IX88_16690 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 IX88_16690 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 168 395 6.2E-81 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 IX88_16690 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 SUPERFAMILY SSF52777 170 397 5.78E-88 T 11-10-2018 IX88_16690 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 Gene3D G3DSA:4.10.320.10 103 152 2.5E-13 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 IX88_16690 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 SUPERFAMILY SSF51230 1 95 1.83E-24 T 11-10-2018 IPR011053 Single hybrid motif IX88_16690 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 Gene3D G3DSA:3.30.559.10 166 398 9.9E-95 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 IX88_16690 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 SUPERFAMILY SSF47005 111 151 4.97E-10 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 IX88_16690 be0bd5f2a5fc3ce06bfa6b0e586f6d6c 398 Pfam PF02817 e3 binding domain 116 146 4.4E-11 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 Pfam PF11638 DnaA N-terminal domain 2 60 4.0E-12 T 11-10-2018 IPR024633 DnaA N-terminal domain IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 Gene3D G3DSA:3.30.300.180 1 111 2.6E-19 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 Pfam PF00308 Bacterial dnaA protein 129 347 4.5E-84 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 SUPERFAMILY SSF48295 362 464 4.97E-33 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 195 209 1.1E-48 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 227 241 1.1E-48 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 163 183 1.1E-48 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 423 442 1.1E-48 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 261 288 1.1E-48 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 Gene3D G3DSA:1.10.1750.10 372 465 3.2E-31 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 SUPERFAMILY SSF52540 130 342 3.03E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 ProSitePatterns PS01008 DnaA protein signature. 423 442 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 SMART SM00382 162 292 1.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 464 29.598 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 SMART SM00760 373 442 5.0E-39 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 3 462 1.3E-153 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 Gene3D G3DSA:3.40.50.300 128 295 8.8E-46 T 11-10-2018 IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 374 442 5.0E-28 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 IX88_02200 5570805e50b523eb5acc2aa2ec266e25 465 Gene3D G3DSA:1.10.8.60 296 366 1.1E-21 T 11-10-2018 IX88_16480 6bc7ad2acf68dd5388ef54cb56d2b15c 544 SUPERFAMILY SSF48592 7 521 4.05E-78 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily IX88_16480 6bc7ad2acf68dd5388ef54cb56d2b15c 544 Gene3D G3DSA:3.50.7.10 173 379 5.5E-239 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily IX88_16480 6bc7ad2acf68dd5388ef54cb56d2b15c 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 2.7E-94 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 IX88_16480 6bc7ad2acf68dd5388ef54cb56d2b15c 544 Gene3D G3DSA:3.30.260.10 138 410 5.5E-239 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily IX88_16480 6bc7ad2acf68dd5388ef54cb56d2b15c 544 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 IX88_16480 6bc7ad2acf68dd5388ef54cb56d2b15c 544 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 IX88_16480 6bc7ad2acf68dd5388ef54cb56d2b15c 544 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 IX88_16480 6bc7ad2acf68dd5388ef54cb56d2b15c 544 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 IX88_16480 6bc7ad2acf68dd5388ef54cb56d2b15c 544 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 IX88_16480 6bc7ad2acf68dd5388ef54cb56d2b15c 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 IX88_16480 6bc7ad2acf68dd5388ef54cb56d2b15c 544 SUPERFAMILY SSF54849 138 204 1.65E-21 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily IX88_16480 6bc7ad2acf68dd5388ef54cb56d2b15c 544 Gene3D G3DSA:1.10.560.10 8 521 5.5E-239 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily IX88_16480 6bc7ad2acf68dd5388ef54cb56d2b15c 544 SUPERFAMILY SSF52029 184 376 1.33E-83 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily IX88_16480 6bc7ad2acf68dd5388ef54cb56d2b15c 544 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 41.015 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 IX88_16480 6bc7ad2acf68dd5388ef54cb56d2b15c 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.7E-253 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 IX88_13205 29467b06b4e9dd32ad41c9cb2074b295 440 Pfam PF07690 Major Facilitator Superfamily 18 311 3.1E-16 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_13205 29467b06b4e9dd32ad41c9cb2074b295 440 Gene3D G3DSA:1.20.1250.20 7 425 2.7E-31 T 11-10-2018 IX88_13205 29467b06b4e9dd32ad41c9cb2074b295 440 SUPERFAMILY SSF103473 10 428 1.57E-33 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_17595 8edc64ad3c9344d4b509fd7598c07c48 552 SMART SM00388 332 396 2.3E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_17595 8edc64ad3c9344d4b509fd7598c07c48 552 SUPERFAMILY SSF55874 386 549 1.06E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_17595 8edc64ad3c9344d4b509fd7598c07c48 552 SMART SM00304 279 331 4.5E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 IX88_17595 8edc64ad3c9344d4b509fd7598c07c48 552 Gene3D G3DSA:3.30.565.10 403 552 8.6E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_17595 8edc64ad3c9344d4b509fd7598c07c48 552 SMART SM00387 440 552 3.9E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_17595 8edc64ad3c9344d4b509fd7598c07c48 552 SUPERFAMILY SSF47384 316 397 1.35E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IX88_17595 8edc64ad3c9344d4b509fd7598c07c48 552 SUPERFAMILY SSF158472 281 327 8.5E-8 T 11-10-2018 IX88_17595 8edc64ad3c9344d4b509fd7598c07c48 552 Pfam PF00512 His Kinase A (phospho-acceptor) domain 332 395 1.0E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_17595 8edc64ad3c9344d4b509fd7598c07c48 552 Gene3D G3DSA:1.20.1480.50 247 337 6.4E-10 T 11-10-2018 IX88_17595 8edc64ad3c9344d4b509fd7598c07c48 552 Gene3D G3DSA:1.10.287.130 338 397 1.7E-10 T 11-10-2018 IX88_17595 8edc64ad3c9344d4b509fd7598c07c48 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 491 1.9E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_17595 8edc64ad3c9344d4b509fd7598c07c48 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 530 1.9E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_17595 8edc64ad3c9344d4b509fd7598c07c48 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 505 1.9E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_17595 8edc64ad3c9344d4b509fd7598c07c48 552 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 441 550 4.3E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_16980 11726d1b395ac0ce69c2a452090de73b 395 SUPERFAMILY SSF54506 2 182 2.35E-72 T 11-10-2018 IX88_16980 11726d1b395ac0ce69c2a452090de73b 395 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 4 395 4.4E-233 T 11-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 IX88_16980 11726d1b395ac0ce69c2a452090de73b 395 Gene3D G3DSA:3.10.310.10 11 388 1.6E-151 T 11-10-2018 IX88_16980 11726d1b395ac0ce69c2a452090de73b 395 Gene3D G3DSA:3.10.310.10 181 374 1.6E-151 T 11-10-2018 IX88_16980 11726d1b395ac0ce69c2a452090de73b 395 Pfam PF04303 PrpF protein 6 391 6.9E-177 T 11-10-2018 IPR007400 PrpF protein IX88_16980 11726d1b395ac0ce69c2a452090de73b 395 SUPERFAMILY SSF54506 189 393 2.12E-78 T 11-10-2018 IX88_07330 3e1c067146a9fec8644d694a875cb440 336 Gene3D G3DSA:1.10.3720.10 125 331 4.0E-16 T 11-10-2018 IPR035906 MetI-like superfamily IX88_07330 3e1c067146a9fec8644d694a875cb440 336 SUPERFAMILY SSF161098 132 319 3.92E-20 T 11-10-2018 IPR035906 MetI-like superfamily IX88_07330 3e1c067146a9fec8644d694a875cb440 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 155 335 2.4E-27 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_02105 7fc08d2d0d776cd20e32a5795e319512 199 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 75 2.7E-12 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 IX88_02105 7fc08d2d0d776cd20e32a5795e319512 199 Gene3D G3DSA:3.40.30.10 1 78 5.3E-24 T 11-10-2018 IX88_02105 7fc08d2d0d776cd20e32a5795e319512 199 SUPERFAMILY SSF47616 72 198 3.41E-29 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IX88_02105 7fc08d2d0d776cd20e32a5795e319512 199 Pfam PF00043 Glutathione S-transferase, C-terminal domain 120 189 1.5E-12 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal IX88_02105 7fc08d2d0d776cd20e32a5795e319512 199 Gene3D G3DSA:1.20.1050.10 81 196 1.0E-40 T 11-10-2018 IX88_02105 7fc08d2d0d776cd20e32a5795e319512 199 SUPERFAMILY SSF52833 1 86 6.69E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_15120 a577c850407542dc41946174754f6eb6 499 PIRSF PIRSF036557 3 492 5.0E-193 T 11-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria IX88_15120 a577c850407542dc41946174754f6eb6 499 SUPERFAMILY SSF56176 195 369 5.01E-49 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 IX88_15120 a577c850407542dc41946174754f6eb6 499 SUPERFAMILY SSF55447 377 480 2.22E-30 T 11-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily IX88_15120 a577c850407542dc41946174754f6eb6 499 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 48 56 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 IX88_15120 a577c850407542dc41946174754f6eb6 499 SUPERFAMILY SSF54292 12 95 9.99E-15 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 IX88_15120 a577c850407542dc41946174754f6eb6 499 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 205 369 2.7E-46 T 11-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 IX88_15120 a577c850407542dc41946174754f6eb6 499 Gene3D G3DSA:3.30.390.50 379 481 1.7E-26 T 11-10-2018 IX88_15120 a577c850407542dc41946174754f6eb6 499 Pfam PF01799 [2Fe-2S] binding domain 90 168 1.6E-30 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 IX88_15120 a577c850407542dc41946174754f6eb6 499 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 380 480 1.8E-28 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal IX88_15120 a577c850407542dc41946174754f6eb6 499 Gene3D G3DSA:3.30.43.10 207 256 1.8E-18 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 IX88_15120 a577c850407542dc41946174754f6eb6 499 Gene3D G3DSA:3.10.20.30 2 96 1.2E-24 T 11-10-2018 IPR012675 Beta-grasp domain superfamily IX88_15120 a577c850407542dc41946174754f6eb6 499 Gene3D G3DSA:1.10.150.120 101 174 8.2E-33 T 11-10-2018 IX88_15120 a577c850407542dc41946174754f6eb6 499 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 6 480 2.0E-200 T 11-10-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 IX88_15120 a577c850407542dc41946174754f6eb6 499 SUPERFAMILY SSF47741 106 212 4.71E-33 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily IX88_15120 a577c850407542dc41946174754f6eb6 499 SMART SM01092 379 481 4.8E-31 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal IX88_15120 a577c850407542dc41946174754f6eb6 499 Gene3D G3DSA:3.30.465.10 257 369 7.0E-30 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 IX88_03370 80d8a5c234dc19c61faeedb6807b48a5 135 SUPERFAMILY SSF102400 1 134 3.92E-31 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily IX88_03370 80d8a5c234dc19c61faeedb6807b48a5 135 Gene3D G3DSA:3.40.50.10110 1 134 5.6E-30 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily IX88_03370 80d8a5c234dc19c61faeedb6807b48a5 135 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 130 4.6E-29 T 11-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 IX88_17990 8cc9b41d861119365ed6ff30dc215449 601 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 14 354 1.2E-123 T 11-10-2018 IPR010839 Acyclic terpene utilisation IX88_00615 2646a087c79df1e30a1849e0460e34af 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 30 1.3E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_00615 2646a087c79df1e30a1849e0460e34af 157 Pfam PF12019 Type II transport protein GspH 47 143 2.6E-5 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 IX88_00615 2646a087c79df1e30a1849e0460e34af 157 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_00615 2646a087c79df1e30a1849e0460e34af 157 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 29 8.0E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_00615 2646a087c79df1e30a1849e0460e34af 157 Gene3D G3DSA:3.30.700.10 10 145 6.1E-15 T 11-10-2018 IX88_00615 2646a087c79df1e30a1849e0460e34af 157 SUPERFAMILY SSF54523 10 126 5.96E-15 T 11-10-2018 IX88_04370 a0ba40ea5ceab6f9a75e1e6d6ed05e20 472 SUPERFAMILY SSF53732 2 471 2.62E-166 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 IX88_04370 a0ba40ea5ceab6f9a75e1e6d6ed05e20 472 Gene3D G3DSA:3.30.499.20 5 292 8.6E-97 T 11-10-2018 IX88_04370 a0ba40ea5ceab6f9a75e1e6d6ed05e20 472 Gene3D G3DSA:3.30.499.10 333 472 5.8E-50 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 IX88_04370 a0ba40ea5ceab6f9a75e1e6d6ed05e20 472 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 IX88_04370 a0ba40ea5ceab6f9a75e1e6d6ed05e20 472 PRINTS PR00415 Aconitase family signature 88 101 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04370 a0ba40ea5ceab6f9a75e1e6d6ed05e20 472 PRINTS PR00415 Aconitase family signature 349 360 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04370 a0ba40ea5ceab6f9a75e1e6d6ed05e20 472 PRINTS PR00415 Aconitase family signature 139 154 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04370 a0ba40ea5ceab6f9a75e1e6d6ed05e20 472 PRINTS PR00415 Aconitase family signature 201 214 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04370 a0ba40ea5ceab6f9a75e1e6d6ed05e20 472 PRINTS PR00415 Aconitase family signature 215 228 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04370 a0ba40ea5ceab6f9a75e1e6d6ed05e20 472 PRINTS PR00415 Aconitase family signature 114 122 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04370 a0ba40ea5ceab6f9a75e1e6d6ed05e20 472 PRINTS PR00415 Aconitase family signature 292 306 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04370 a0ba40ea5ceab6f9a75e1e6d6ed05e20 472 PRINTS PR00415 Aconitase family signature 406 419 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04370 a0ba40ea5ceab6f9a75e1e6d6ed05e20 472 PRINTS PR00415 Aconitase family signature 125 138 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04370 a0ba40ea5ceab6f9a75e1e6d6ed05e20 472 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 472 4.0E-234 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 IX88_04370 a0ba40ea5ceab6f9a75e1e6d6ed05e20 472 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 472 59.184 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 IX88_04370 a0ba40ea5ceab6f9a75e1e6d6ed05e20 472 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 IX88_04370 a0ba40ea5ceab6f9a75e1e6d6ed05e20 472 Pfam PF00330 Aconitase family (aconitate hydratase) 8 464 3.2E-161 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_06075 7c9ebce74af2e75ec82fd193ad893f61 328 Gene3D G3DSA:3.30.70.250 134 207 9.5E-93 T 11-10-2018 IX88_06075 7c9ebce74af2e75ec82fd193ad893f61 328 PIRSF PIRSF000446 12 321 1.7E-104 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 IX88_06075 7c9ebce74af2e75ec82fd193ad893f61 328 SUPERFAMILY SSF55048 138 203 8.76E-15 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding IX88_06075 7c9ebce74af2e75ec82fd193ad893f61 328 Pfam PF00698 Acyl transferase domain 17 291 9.8E-37 T 11-10-2018 IPR014043 Acyl transferase IX88_06075 7c9ebce74af2e75ec82fd193ad893f61 328 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 14 298 8.5E-99 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 IX88_06075 7c9ebce74af2e75ec82fd193ad893f61 328 Gene3D G3DSA:3.40.366.10 17 296 9.5E-93 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 IX88_06075 7c9ebce74af2e75ec82fd193ad893f61 328 SUPERFAMILY SSF52151 15 318 1.73E-70 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IX88_06075 7c9ebce74af2e75ec82fd193ad893f61 328 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 18 325 1.8E-39 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain IX88_17090 2a5597cfbcf821dc8e8f7d862d4094bd 492 Gene3D G3DSA:3.90.1300.10 3 487 6.9E-202 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 IX88_17090 2a5597cfbcf821dc8e8f7d862d4094bd 492 SUPERFAMILY SSF75304 3 484 1.2E-165 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 IX88_17090 2a5597cfbcf821dc8e8f7d862d4094bd 492 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 16 479 1.9E-186 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 IX88_17090 2a5597cfbcf821dc8e8f7d862d4094bd 492 ProSitePatterns PS00571 Amidases signature. 152 183 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 IX88_17090 2a5597cfbcf821dc8e8f7d862d4094bd 492 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 479 91.764 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 IX88_17090 2a5597cfbcf821dc8e8f7d862d4094bd 492 Pfam PF01425 Amidase 25 468 8.1E-165 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 IX88_18075 ac464e078948f08421eb7cf43f65f399 220 Pfam PF00445 Ribonuclease T2 family 42 197 4.2E-5 T 11-10-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 IX88_18075 ac464e078948f08421eb7cf43f65f399 220 Gene3D G3DSA:3.90.730.10 28 219 2.6E-10 T 11-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 IX88_18075 ac464e078948f08421eb7cf43f65f399 220 SUPERFAMILY SSF55895 36 216 3.27E-17 T 11-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 IX88_02005 21019f5b128bc1dbf62a2fbad5506a0a 217 SUPERFAMILY SSF55961 15 203 1.32E-34 T 11-10-2018 IX88_02005 21019f5b128bc1dbf62a2fbad5506a0a 217 Gene3D G3DSA:3.30.530.20 26 211 7.1E-48 T 11-10-2018 IPR023393 START-like domain superfamily IX88_02005 21019f5b128bc1dbf62a2fbad5506a0a 217 PIRSF PIRSF039033 2 215 2.5E-42 T 11-10-2018 IPR028347 START domain-containing protein IX88_02005 21019f5b128bc1dbf62a2fbad5506a0a 217 Pfam PF01852 START domain 33 192 7.8E-9 T 11-10-2018 IPR002913 START domain GO:0008289 IX88_00730 3a743e2d611ba2f22244943a532aaeba 213 Pfam PF05137 Fimbrial assembly protein (PilN) 100 187 9.7E-18 T 11-10-2018 IPR007813 Fimbrial assembly PilN IX88_16965 10c0327d741dcdb8230f690a9120ce41 284 Gene3D G3DSA:3.30.479.30 49 181 7.0E-38 T 11-10-2018 IX88_16965 10c0327d741dcdb8230f690a9120ce41 284 SMART SM00244 21 179 7.8E-55 T 11-10-2018 IPR001107 Band 7 domain IX88_16965 10c0327d741dcdb8230f690a9120ce41 284 PRINTS PR00721 Stomatin signature 155 173 5.7E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 IX88_16965 10c0327d741dcdb8230f690a9120ce41 284 PRINTS PR00721 Stomatin signature 131 154 5.7E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 IX88_16965 10c0327d741dcdb8230f690a9120ce41 284 PRINTS PR00721 Stomatin signature 28 50 5.7E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 IX88_16965 10c0327d741dcdb8230f690a9120ce41 284 PRINTS PR00721 Stomatin signature 76 97 5.7E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 IX88_16965 10c0327d741dcdb8230f690a9120ce41 284 PRINTS PR00721 Stomatin signature 111 128 5.7E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 IX88_16965 10c0327d741dcdb8230f690a9120ce41 284 PRINTS PR00721 Stomatin signature 174 195 5.7E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 IX88_16965 10c0327d741dcdb8230f690a9120ce41 284 SUPERFAMILY SSF117892 52 186 9.02E-38 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily IX88_16965 10c0327d741dcdb8230f690a9120ce41 284 Pfam PF01145 SPFH domain / Band 7 family 25 195 2.6E-35 T 11-10-2018 IPR001107 Band 7 domain IX88_16995 be2be916cb67ff28bdc7ab48289b7076 291 Gene3D G3DSA:3.40.50.880 4 291 6.0E-77 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_16995 be2be916cb67ff28bdc7ab48289b7076 291 PIRSF PIRSF037798 1 291 1.2E-161 T 11-10-2018 IPR017283 Protein/nucleic acid deglycase HchA GO:0036524 IX88_16995 be2be916cb67ff28bdc7ab48289b7076 291 Pfam PF01965 DJ-1/PfpI family 77 198 1.1E-8 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 IX88_16995 be2be916cb67ff28bdc7ab48289b7076 291 SUPERFAMILY SSF52317 8 288 4.98E-52 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_10065 3a5d820f1a826a18a6cc686095dbf625 106 Gene3D G3DSA:2.60.300.12 1 106 1.4E-37 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 IX88_10065 3a5d820f1a826a18a6cc686095dbf625 106 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 2 106 2.4E-52 T 11-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 IX88_10065 3a5d820f1a826a18a6cc686095dbf625 106 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 87 104 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 IX88_10065 3a5d820f1a826a18a6cc686095dbf625 106 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 2 106 9.4E-37 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 IX88_10065 3a5d820f1a826a18a6cc686095dbf625 106 SUPERFAMILY SSF89360 1 95 7.85E-33 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 IX88_10065 3a5d820f1a826a18a6cc686095dbf625 106 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 102 1.6E-22 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 IX88_06040 ba7b59f9f0c65f44a28824995e0c3b2a 307 SUPERFAMILY SSF55174 5 97 1.03E-17 T 11-10-2018 IX88_06040 ba7b59f9f0c65f44a28824995e0c3b2a 307 Gene3D G3DSA:3.10.290.10 1 58 3.1E-19 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 IX88_06040 ba7b59f9f0c65f44a28824995e0c3b2a 307 Gene3D G3DSA:3.30.70.1560 134 217 5.2E-49 T 11-10-2018 IX88_06040 ba7b59f9f0c65f44a28824995e0c3b2a 307 Pfam PF00849 RNA pseudouridylate synthase 67 199 3.1E-16 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_06040 ba7b59f9f0c65f44a28824995e0c3b2a 307 Gene3D G3DSA:3.30.70.580 68 235 5.2E-49 T 11-10-2018 IX88_06040 ba7b59f9f0c65f44a28824995e0c3b2a 307 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 IX88_06040 ba7b59f9f0c65f44a28824995e0c3b2a 307 SMART SM00363 3 64 6.2E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_06040 ba7b59f9f0c65f44a28824995e0c3b2a 307 Pfam PF01479 S4 domain 4 48 1.4E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_06040 ba7b59f9f0c65f44a28824995e0c3b2a 307 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 231 6.6E-53 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 IX88_06040 ba7b59f9f0c65f44a28824995e0c3b2a 307 SUPERFAMILY SSF55120 66 235 4.03E-41 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_17885 cc5b3ab56c0b94760f3fb3b6b1514287 159 Pfam PF00691 OmpA family 56 151 3.8E-23 T 11-10-2018 IPR006665 OmpA-like domain IX88_17885 cc5b3ab56c0b94760f3fb3b6b1514287 159 SUPERFAMILY SSF103088 43 159 9.16E-37 T 11-10-2018 IPR036737 OmpA-like domain superfamily IX88_17885 cc5b3ab56c0b94760f3fb3b6b1514287 159 PRINTS PR01021 OMPA domain signature 57 79 1.1E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_17885 cc5b3ab56c0b94760f3fb3b6b1514287 159 PRINTS PR01021 OMPA domain signature 87 102 1.1E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_17885 cc5b3ab56c0b94760f3fb3b6b1514287 159 PRINTS PR01021 OMPA domain signature 102 118 1.1E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_17885 cc5b3ab56c0b94760f3fb3b6b1514287 159 ProSitePatterns PS01068 OmpA-like domain. 89 133 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 IX88_17885 cc5b3ab56c0b94760f3fb3b6b1514287 159 Gene3D G3DSA:3.30.1330.60 25 158 5.6E-41 T 11-10-2018 IPR036737 OmpA-like domain superfamily IX88_13435 d08bc12c3b3aa0e1853c7caf3b06f748 259 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 7.1E-11 T 11-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal IX88_13435 d08bc12c3b3aa0e1853c7caf3b06f748 259 SMART SM00460 153 215 1.2E-16 T 11-10-2018 IPR002931 Transglutaminase-like IX88_13435 d08bc12c3b3aa0e1853c7caf3b06f748 259 Pfam PF01841 Transglutaminase-like superfamily 125 212 3.6E-22 T 11-10-2018 IPR002931 Transglutaminase-like IX88_13435 d08bc12c3b3aa0e1853c7caf3b06f748 259 Gene3D G3DSA:3.10.620.30 66 250 1.6E-46 T 11-10-2018 IX88_13435 d08bc12c3b3aa0e1853c7caf3b06f748 259 SUPERFAMILY SSF54001 99 240 5.2E-40 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily IX88_09480 6a1aaeb274f64f4cced15de1dd530776 410 Gene3D G3DSA:1.10.443.10 218 377 5.3E-11 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 IX88_09480 6a1aaeb274f64f4cced15de1dd530776 410 Pfam PF13356 Arm DNA-binding domain 8 81 2.8E-6 T 11-10-2018 IPR025166 Integrase, DNA-binding domain IX88_09480 6a1aaeb274f64f4cced15de1dd530776 410 Pfam PF00589 Phage integrase family 227 353 5.7E-6 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 IX88_09480 6a1aaeb274f64f4cced15de1dd530776 410 Gene3D G3DSA:1.10.150.130 101 207 1.6E-6 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal IX88_09480 6a1aaeb274f64f4cced15de1dd530776 410 SUPERFAMILY SSF56349 106 355 1.77E-25 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 IX88_09480 6a1aaeb274f64f4cced15de1dd530776 410 Gene3D G3DSA:3.30.160.390 6 90 1.7E-5 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily IX88_15995 54ef8da84da07fe0369a8c7721bc83b7 426 Pfam PF04052 TolB amino-terminal domain 30 123 6.0E-20 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 IX88_15995 54ef8da84da07fe0369a8c7721bc83b7 426 Gene3D G3DSA:2.120.10.30 160 426 3.5E-83 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like IX88_15995 54ef8da84da07fe0369a8c7721bc83b7 426 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 10 423 42.088 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 IX88_15995 54ef8da84da07fe0369a8c7721bc83b7 426 Gene3D G3DSA:3.40.50.10070 25 159 3.2E-32 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 IX88_15995 54ef8da84da07fe0369a8c7721bc83b7 426 SUPERFAMILY SSF69304 149 425 3.66E-55 T 11-10-2018 IX88_15995 54ef8da84da07fe0369a8c7721bc83b7 426 Pfam PF07676 WD40-like Beta Propeller Repeat 369 393 0.0016 T 11-10-2018 IPR011659 WD40-like Beta Propeller IX88_15995 54ef8da84da07fe0369a8c7721bc83b7 426 Pfam PF07676 WD40-like Beta Propeller Repeat 200 223 0.0084 T 11-10-2018 IPR011659 WD40-like Beta Propeller IX88_15995 54ef8da84da07fe0369a8c7721bc83b7 426 Pfam PF07676 WD40-like Beta Propeller Repeat 277 312 1.0E-11 T 11-10-2018 IPR011659 WD40-like Beta Propeller IX88_15995 54ef8da84da07fe0369a8c7721bc83b7 426 Pfam PF07676 WD40-like Beta Propeller Repeat 235 268 2.3E-8 T 11-10-2018 IPR011659 WD40-like Beta Propeller IX88_15995 54ef8da84da07fe0369a8c7721bc83b7 426 SUPERFAMILY SSF52964 38 156 3.14E-27 T 11-10-2018 IX88_15995 54ef8da84da07fe0369a8c7721bc83b7 426 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 23 423 1.9E-150 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 IX88_00890 b19dcd8568ea95c940fb3c458f130693 425 PIRSF PIRSF001434 1 425 6.8E-138 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 IX88_00890 b19dcd8568ea95c940fb3c458f130693 425 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 5 422 5.6E-202 T 11-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 IX88_00890 b19dcd8568ea95c940fb3c458f130693 425 Gene3D G3DSA:3.40.640.10 4 287 1.9E-102 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_00890 b19dcd8568ea95c940fb3c458f130693 425 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 422 2.8E-147 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 IX88_00890 b19dcd8568ea95c940fb3c458f130693 425 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 IX88_00890 b19dcd8568ea95c940fb3c458f130693 425 SUPERFAMILY SSF53383 4 422 6.92E-132 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_00890 b19dcd8568ea95c940fb3c458f130693 425 Gene3D G3DSA:3.90.1150.10 291 425 7.6E-55 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 Gene3D G3DSA:2.40.30.10 300 412 1.8E-44 T 11-10-2018 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 SUPERFAMILY SSF54980 409 486 4.32E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 SMART SM00838 610 698 8.3E-57 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 SUPERFAMILY SSF54211 489 609 1.11E-41 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.2E-64 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 SMART SM00889 487 608 3.6E-62 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 Gene3D G3DSA:3.30.230.10 491 697 1.4E-86 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 2.1E-29 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 Hamap MF_00054_B Elongation factor G [fusA]. 6 702 112.204 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 Pfam PF00679 Elongation factor G C-terminus 610 696 2.8E-31 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 Gene3D G3DSA:3.30.70.870 413 487 6.8E-33 T 11-10-2018 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 Gene3D G3DSA:3.40.50.300 1 299 4.1E-111 T 11-10-2018 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 Pfam PF03764 Elongation factor G, domain IV 486 607 2.8E-41 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 Pfam PF03144 Elongation factor Tu domain 2 331 398 2.7E-18 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 Pfam PF14492 Elongation Factor G, domain II 411 485 6.9E-35 T 11-10-2018 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 PRINTS PR00315 GTP-binding elongation factor signature 85 95 5.0E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 PRINTS PR00315 GTP-binding elongation factor signature 137 146 5.0E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 PRINTS PR00315 GTP-binding elongation factor signature 12 25 5.0E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 PRINTS PR00315 GTP-binding elongation factor signature 101 112 5.0E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.0E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 SUPERFAMILY SSF54980 613 701 1.01E-29 T 11-10-2018 IPR035647 EF-G domain III/V-like IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 702 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 SUPERFAMILY SSF50447 271 411 1.15E-35 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 Gene3D G3DSA:3.30.70.240 614 685 1.4E-86 T 11-10-2018 IX88_06315 74df3ae35285fd138e4873854bbc11cb 712 SUPERFAMILY SSF52540 6 288 6.12E-105 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_02090 4a3f1d4ab8d0ba52c730e241886e6380 492 Pfam PF00209 Sodium:neurotransmitter symporter family 5 119 2.0E-38 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 IX88_02090 4a3f1d4ab8d0ba52c730e241886e6380 492 Pfam PF00209 Sodium:neurotransmitter symporter family 126 482 8.4E-68 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 IX88_02090 4a3f1d4ab8d0ba52c730e241886e6380 492 SUPERFAMILY SSF161070 5 485 3.66E-136 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 IX88_02090 4a3f1d4ab8d0ba52c730e241886e6380 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 4.6E-26 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 IX88_02090 4a3f1d4ab8d0ba52c730e241886e6380 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 313 332 4.6E-26 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 IX88_02090 4a3f1d4ab8d0ba52c730e241886e6380 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 86 112 4.6E-26 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 IX88_02090 4a3f1d4ab8d0ba52c730e241886e6380 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 391 411 4.6E-26 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 IX88_02090 4a3f1d4ab8d0ba52c730e241886e6380 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 4.6E-26 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 IX88_02090 4a3f1d4ab8d0ba52c730e241886e6380 492 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 29 43 - T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 IX88_17335 64488ad2f532c2d252ba61ea77da0e9f 188 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 9 184 7.0E-53 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 IX88_17335 64488ad2f532c2d252ba61ea77da0e9f 188 SUPERFAMILY SSF50486 4 188 1.73E-57 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 IX88_17335 64488ad2f532c2d252ba61ea77da0e9f 188 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 6 187 2.0E-50 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 IX88_17335 64488ad2f532c2d252ba61ea77da0e9f 188 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 7 187 27.318 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 IX88_17335 64488ad2f532c2d252ba61ea77da0e9f 188 Gene3D G3DSA:3.10.300.10 1 188 6.7E-58 T 11-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 IX88_05755 95825814cbbe4d434c2fdedf6871d875 169 PIRSF PIRSF000216 5 169 3.9E-49 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05755 95825814cbbe4d434c2fdedf6871d875 169 Gene3D G3DSA:1.10.10.1590 16 85 2.1E-15 T 11-10-2018 IX88_05755 95825814cbbe4d434c2fdedf6871d875 169 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 26 168 2.1E-46 T 11-10-2018 IX88_05755 95825814cbbe4d434c2fdedf6871d875 169 SUPERFAMILY SSF52833 18 168 1.79E-46 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_05755 95825814cbbe4d434c2fdedf6871d875 169 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 126 144 - T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05755 95825814cbbe4d434c2fdedf6871d875 169 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 24 168 2.1E-46 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05755 95825814cbbe4d434c2fdedf6871d875 169 Gene3D G3DSA:3.40.30.10 86 168 3.1E-23 T 11-10-2018 IX88_05565 97df889bdcea8681277baa7ed4b15078 406 Gene3D G3DSA:1.20.140.10 253 406 1.8E-39 T 11-10-2018 IX88_05565 97df889bdcea8681277baa7ed4b15078 406 SUPERFAMILY SSF47203 251 400 1.35E-40 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_05565 97df889bdcea8681277baa7ed4b15078 406 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 357 376 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 IX88_05565 97df889bdcea8681277baa7ed4b15078 406 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 252 397 7.0E-27 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_05565 97df889bdcea8681277baa7ed4b15078 406 Gene3D G3DSA:2.40.110.10 142 251 2.3E-37 T 11-10-2018 IX88_05565 97df889bdcea8681277baa7ed4b15078 406 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 143 239 3.3E-21 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_05565 97df889bdcea8681277baa7ed4b15078 406 SUPERFAMILY SSF56645 14 250 1.57E-78 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_05565 97df889bdcea8681277baa7ed4b15078 406 Gene3D G3DSA:1.10.540.10 9 141 1.5E-42 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_05565 97df889bdcea8681277baa7ed4b15078 406 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 27 139 1.5E-34 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_16505 b7e27e06773f9d69041dcb2726b5f022 505 Gene3D G3DSA:3.30.9.10 90 326 2.4E-134 T 11-10-2018 IX88_16505 b7e27e06773f9d69041dcb2726b5f022 505 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 387 491 4.4E-15 T 11-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 IX88_16505 b7e27e06773f9d69041dcb2726b5f022 505 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 17 34 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 IX88_16505 b7e27e06773f9d69041dcb2726b5f022 505 Pfam PF01266 FAD dependent oxidoreductase 13 333 5.4E-46 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 IX88_16505 b7e27e06773f9d69041dcb2726b5f022 505 SUPERFAMILY SSF51905 10 300 1.34E-32 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_16505 b7e27e06773f9d69041dcb2726b5f022 505 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 358 368 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 IX88_16505 b7e27e06773f9d69041dcb2726b5f022 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 41 53 4.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 IX88_16505 b7e27e06773f9d69041dcb2726b5f022 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 319 325 4.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 IX88_16505 b7e27e06773f9d69041dcb2726b5f022 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 353 365 4.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 IX88_16505 b7e27e06773f9d69041dcb2726b5f022 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 25 35 4.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 IX88_16505 b7e27e06773f9d69041dcb2726b5f022 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 86 98 4.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 IX88_16505 b7e27e06773f9d69041dcb2726b5f022 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 12 24 4.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 IX88_16505 b7e27e06773f9d69041dcb2726b5f022 505 Gene3D G3DSA:3.50.50.60 13 372 2.4E-134 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_16505 b7e27e06773f9d69041dcb2726b5f022 505 Gene3D G3DSA:1.10.8.870 399 467 1.1E-20 T 11-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 IX88_12195 21655407d58044bcdcddfabac8eaf972 479 SUPERFAMILY SSF46785 12 85 1.23E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_12195 21655407d58044bcdcddfabac8eaf972 479 SMART SM00345 23 82 2.2E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_12195 21655407d58044bcdcddfabac8eaf972 479 Gene3D G3DSA:1.10.10.10 18 115 2.4E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_12195 21655407d58044bcdcddfabac8eaf972 479 SUPERFAMILY SSF53383 104 462 3.68E-86 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_12195 21655407d58044bcdcddfabac8eaf972 479 Gene3D G3DSA:3.40.640.10 153 369 8.6E-83 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_12195 21655407d58044bcdcddfabac8eaf972 479 Pfam PF00155 Aminotransferase class I and II 131 461 1.7E-41 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 IX88_12195 21655407d58044bcdcddfabac8eaf972 479 Gene3D G3DSA:3.90.1150.10 116 462 8.6E-83 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_12195 21655407d58044bcdcddfabac8eaf972 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 82 1.8E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_09890 f941795c3f7c3839c7dbc8e13ae521f0 121 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 87 2.7E-16 T 11-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 IX88_08145 39703e0501613f66634ae0c7859d057c 460 SUPERFAMILY SSF50022 14 171 1.03E-44 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_08145 39703e0501613f66634ae0c7859d057c 460 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 203 391 2.5E-19 T 11-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 IX88_08145 39703e0501613f66634ae0c7859d057c 460 Pfam PF00355 Rieske [2Fe-2S] domain 52 135 2.1E-22 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 IX88_08145 39703e0501613f66634ae0c7859d057c 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 109 129 1.4E-48 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_08145 39703e0501613f66634ae0c7859d057c 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 88 108 1.4E-48 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_08145 39703e0501613f66634ae0c7859d057c 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 196 218 1.4E-48 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_08145 39703e0501613f66634ae0c7859d057c 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 155 181 1.4E-48 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_08145 39703e0501613f66634ae0c7859d057c 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 37 62 1.4E-48 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_08145 39703e0501613f66634ae0c7859d057c 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 67 82 1.4E-48 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_08145 39703e0501613f66634ae0c7859d057c 460 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 95 118 - T 11-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 IX88_08145 39703e0501613f66634ae0c7859d057c 460 TIGRFAM TIGR03229 benzo_1_2_benA: benzoate 1,2-dioxygenase, large subunit 15 447 4.8E-274 T 11-10-2018 IPR017639 Benzoate 1,2-dioxygenase, large subunit IX88_08145 39703e0501613f66634ae0c7859d057c 460 SUPERFAMILY SSF55961 171 454 1.18E-69 T 11-10-2018 IX88_08145 39703e0501613f66634ae0c7859d057c 460 Gene3D G3DSA:3.90.380.10 30 443 2.0E-112 T 11-10-2018 IX88_08145 39703e0501613f66634ae0c7859d057c 460 Gene3D G3DSA:2.102.10.10 52 179 2.0E-112 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_08605 30160e251fbf9d452fdbfc5042bf6c54 312 Gene3D G3DSA:3.20.20.70 4 299 1.5E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_08605 30160e251fbf9d452fdbfc5042bf6c54 312 Pfam PF00682 HMGL-like 12 278 6.1E-43 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 IX88_08605 30160e251fbf9d452fdbfc5042bf6c54 312 SUPERFAMILY SSF51569 8 298 1.26E-65 T 11-10-2018 IX88_03340 18fd3d38a6f299a93d365f5a6253e49b 152 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 152 80.808 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 IX88_03340 18fd3d38a6f299a93d365f5a6253e49b 152 Pfam PF03477 ATP cone domain 50 136 5.8E-18 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 IX88_03340 18fd3d38a6f299a93d365f5a6253e49b 152 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 6.4E-60 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 IX88_03870 5d85888854d91ef3d3090d79d90d0510 257 Gene3D G3DSA:1.10.10.10 2 75 2.7E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_03870 5d85888854d91ef3d3090d79d90d0510 257 SMART SM00346 3 94 0.001 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 IX88_03870 5d85888854d91ef3d3090d79d90d0510 257 SUPERFAMILY SSF55781 80 247 8.5E-28 T 11-10-2018 IX88_03870 5d85888854d91ef3d3090d79d90d0510 257 Gene3D G3DSA:3.30.450.40 76 243 5.3E-23 T 11-10-2018 IPR029016 GAF-like domain superfamily IX88_03870 5d85888854d91ef3d3090d79d90d0510 257 Pfam PF01614 Bacterial transcriptional regulator 129 246 6.0E-12 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal IX88_03870 5d85888854d91ef3d3090d79d90d0510 257 SUPERFAMILY SSF46785 3 74 7.49E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_06860 6eed548d7fc747a9f42e41d05092137f 334 SUPERFAMILY SSF52922 197 333 1.44E-31 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 IX88_06860 6eed548d7fc747a9f42e41d05092137f 334 Gene3D G3DSA:3.40.50.920 203 333 3.2E-34 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 IX88_06860 6eed548d7fc747a9f42e41d05092137f 334 SUPERFAMILY SSF52518 23 192 3.0E-48 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_06860 6eed548d7fc747a9f42e41d05092137f 334 Gene3D G3DSA:3.40.50.970 6 197 7.0E-50 T 11-10-2018 IX88_06860 6eed548d7fc747a9f42e41d05092137f 334 Pfam PF02780 Transketolase, C-terminal domain 203 325 6.1E-28 T 11-10-2018 IPR033248 Transketolase, C-terminal domain IX88_06860 6eed548d7fc747a9f42e41d05092137f 334 Pfam PF02779 Transketolase, pyrimidine binding domain 33 190 1.5E-33 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain IX88_06860 6eed548d7fc747a9f42e41d05092137f 334 SMART SM00861 27 191 2.4E-43 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain IX88_10775 1596b8990f19aaa706dec04a385357b3 384 Pfam PF13353 4Fe-4S single cluster domain 16 97 1.2E-6 T 11-10-2018 IX88_10775 1596b8990f19aaa706dec04a385357b3 384 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 249 334 2.8E-8 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain IX88_10775 1596b8990f19aaa706dec04a385357b3 384 Gene3D G3DSA:3.20.20.70 11 294 2.4E-50 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_10775 1596b8990f19aaa706dec04a385357b3 384 SUPERFAMILY SSF102114 8 316 3.92E-77 T 11-10-2018 IX88_10775 1596b8990f19aaa706dec04a385357b3 384 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 4 363 8.6E-191 T 11-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 IX88_10775 1596b8990f19aaa706dec04a385357b3 384 Pfam PF13186 Iron-sulfur cluster-binding domain 242 307 3.6E-9 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain IX88_10775 1596b8990f19aaa706dec04a385357b3 384 PIRSF PIRSF037420 1 355 6.5E-142 T 11-10-2018 IPR017200 Coenzyme PQQ synthesis protein E IX88_10775 1596b8990f19aaa706dec04a385357b3 384 SMART SM00729 9 212 3.2E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 IX88_10775 1596b8990f19aaa706dec04a385357b3 384 Pfam PF04055 Radical SAM superfamily 15 170 1.2E-22 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 IX88_10775 1596b8990f19aaa706dec04a385357b3 384 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 15 26 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 IX88_10775 1596b8990f19aaa706dec04a385357b3 384 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 374 190.483 T 11-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 IX88_17000 38cb22322143b60e2e4ba45c5740e252 332 Gene3D G3DSA:3.90.180.10 19 328 9.4E-112 T 11-10-2018 IX88_17000 38cb22322143b60e2e4ba45c5740e252 332 SUPERFAMILY SSF51735 117 293 5.86E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_17000 38cb22322143b60e2e4ba45c5740e252 332 SUPERFAMILY SSF50129 7 146 9.28E-43 T 11-10-2018 IPR011032 GroES-like superfamily IX88_17000 38cb22322143b60e2e4ba45c5740e252 332 Gene3D G3DSA:3.40.50.720 126 267 9.4E-112 T 11-10-2018 IX88_17000 38cb22322143b60e2e4ba45c5740e252 332 SMART SM00829 16 328 5.9E-65 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 IX88_17000 38cb22322143b60e2e4ba45c5740e252 332 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 7 330 3.8E-148 T 11-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 IX88_17000 38cb22322143b60e2e4ba45c5740e252 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 105 1.5E-11 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 IX88_17000 38cb22322143b60e2e4ba45c5740e252 332 Pfam PF00107 Zinc-binding dehydrogenase 157 274 8.0E-26 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 IX88_03355 e72432d01f6700bae27e432f6121e909 219 Gene3D G3DSA:2.40.30.20 1 88 1.0E-27 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IX88_03355 e72432d01f6700bae27e432f6121e909 219 Gene3D G3DSA:2.40.30.20 101 205 2.5E-34 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IX88_03355 e72432d01f6700bae27e432f6121e909 219 Pfam PF00677 Lumazine binding domain 99 183 3.4E-24 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 IX88_03355 e72432d01f6700bae27e432f6121e909 219 Pfam PF00677 Lumazine binding domain 3 86 4.9E-22 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 IX88_03355 e72432d01f6700bae27e432f6121e909 219 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 1.2E-64 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 IX88_03355 e72432d01f6700bae27e432f6121e909 219 SUPERFAMILY SSF63380 92 193 6.63E-32 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel IX88_03355 e72432d01f6700bae27e432f6121e909 219 SUPERFAMILY SSF63380 1 88 3.23E-27 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel IX88_03355 e72432d01f6700bae27e432f6121e909 219 PIRSF PIRSF000498 1 212 3.2E-78 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 IX88_13275 d1fb6bbdb37c76e9f7b1d9b781033773 547 Pfam PF13193 AMP-binding enzyme C-terminal domain 450 527 3.5E-22 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IX88_13275 d1fb6bbdb37c76e9f7b1d9b781033773 547 Gene3D G3DSA:3.30.300.30 437 547 4.6E-27 T 11-10-2018 IX88_13275 d1fb6bbdb37c76e9f7b1d9b781033773 547 Pfam PF00501 AMP-binding enzyme 41 440 2.2E-70 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IX88_13275 d1fb6bbdb37c76e9f7b1d9b781033773 547 Gene3D G3DSA:3.40.50.12780 21 436 1.1E-91 T 11-10-2018 IX88_13275 d1fb6bbdb37c76e9f7b1d9b781033773 547 SUPERFAMILY SSF56801 30 543 1.03E-129 T 11-10-2018 IX88_13275 d1fb6bbdb37c76e9f7b1d9b781033773 547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 191 202 - T 11-10-2018 IPR020845 AMP-binding, conserved site IX88_13385 26078a85733bafa2932225147c1739db 663 SUPERFAMILY SSF81442 45 559 3.92E-176 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13385 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 413 432 1.3E-94 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13385 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 126 150 1.3E-94 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13385 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 49 74 1.3E-94 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13385 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 280 301 1.3E-94 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13385 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 168 180 1.3E-94 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13385 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 200 218 1.3E-94 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13385 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 350 371 1.3E-94 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13385 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 99 122 1.3E-94 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13385 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 403 1.3E-94 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13385 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 463 484 1.3E-94 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13385 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 229 248 1.3E-94 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13385 26078a85733bafa2932225147c1739db 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 326 341 1.3E-94 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13385 26078a85733bafa2932225147c1739db 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 58 506 3.1E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13385 26078a85733bafa2932225147c1739db 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 282 336 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13385 26078a85733bafa2932225147c1739db 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 5 649 0.0 T 11-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 IX88_13385 26078a85733bafa2932225147c1739db 663 Gene3D G3DSA:1.20.210.10 31 561 5.4E-187 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_05255 cbc5b9b7723db2e9fc58a74a33df450e 276 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 9 267 8.7E-78 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 IX88_05255 cbc5b9b7723db2e9fc58a74a33df450e 276 SUPERFAMILY SSF51735 8 160 3.37E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_05255 cbc5b9b7723db2e9fc58a74a33df450e 276 Gene3D G3DSA:3.40.50.720 6 164 3.7E-48 T 11-10-2018 IX88_05255 cbc5b9b7723db2e9fc58a74a33df450e 276 PIRSF PIRSF000193 6 270 2.3E-76 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 IX88_05255 cbc5b9b7723db2e9fc58a74a33df450e 276 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 223 245 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 IX88_05255 cbc5b9b7723db2e9fc58a74a33df450e 276 Gene3D G3DSA:1.10.3730.10 165 272 5.8E-41 T 11-10-2018 IX88_05255 cbc5b9b7723db2e9fc58a74a33df450e 276 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 7 267 26.16 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 IX88_05255 cbc5b9b7723db2e9fc58a74a33df450e 276 SUPERFAMILY SSF48179 163 270 5.61E-34 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_05255 cbc5b9b7723db2e9fc58a74a33df450e 276 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 9 100 4.0E-23 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal IX88_05255 cbc5b9b7723db2e9fc58a74a33df450e 276 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 267 4.2E-35 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 IX88_10415 9cd88eaca2cd4fb4068e514568f66d65 395 Pfam PF05762 VWA domain containing CoxE-like protein 190 277 7.5E-8 T 11-10-2018 IPR008912 Uncharacterised protein family CoxE-like IX88_04295 5144a2fe703c23d09a23fc730726b2e9 613 Pfam PF00501 AMP-binding enzyme 51 477 5.6E-61 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IX88_04295 5144a2fe703c23d09a23fc730726b2e9 613 Gene3D G3DSA:3.30.300.30 473 582 5.0E-13 T 11-10-2018 IX88_04295 5144a2fe703c23d09a23fc730726b2e9 613 Gene3D G3DSA:3.40.50.12780 36 470 2.6E-62 T 11-10-2018 IX88_04295 5144a2fe703c23d09a23fc730726b2e9 613 SUPERFAMILY SSF56801 50 577 9.03E-97 T 11-10-2018 IX88_04295 5144a2fe703c23d09a23fc730726b2e9 613 Pfam PF13193 AMP-binding enzyme C-terminal domain 486 565 1.1E-7 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IX88_04295 5144a2fe703c23d09a23fc730726b2e9 613 ProSitePatterns PS00455 Putative AMP-binding domain signature. 218 229 - T 11-10-2018 IPR020845 AMP-binding, conserved site IX88_12020 15654393e4e83e301bbdb8505ad17e01 146 Pfam PF01479 S4 domain 13 58 5.1E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_12020 15654393e4e83e301bbdb8505ad17e01 146 SUPERFAMILY SSF55174 12 108 9.42E-26 T 11-10-2018 IX88_12020 15654393e4e83e301bbdb8505ad17e01 146 Gene3D G3DSA:3.10.290.10 6 112 2.2E-35 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 IX88_12020 15654393e4e83e301bbdb8505ad17e01 146 SMART SM00363 13 77 1.7E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_12020 15654393e4e83e301bbdb8505ad17e01 146 PIRSF PIRSF016821 10 135 2.2E-39 T 11-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 IX88_00675 05a765d0fea7d17b9546800ed78d3751 360 Pfam PF04536 TPM domain 100 223 1.6E-38 T 11-10-2018 IPR007621 TPM domain IX88_00675 05a765d0fea7d17b9546800ed78d3751 360 Gene3D G3DSA:3.10.310.50 89 229 3.9E-47 T 11-10-2018 IX88_08785 2669b4c9c1c9ac5766ba2d0389479df7 1160 SUPERFAMILY SSF52518 455 633 4.3E-12 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_08785 2669b4c9c1c9ac5766ba2d0389479df7 1160 SUPERFAMILY SSF52518 29 206 4.77E-16 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_08785 2669b4c9c1c9ac5766ba2d0389479df7 1160 Gene3D G3DSA:3.40.920.10 738 942 2.5E-23 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 IX88_08785 2669b4c9c1c9ac5766ba2d0389479df7 1160 SUPERFAMILY SSF53323 740 980 6.41E-28 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 IX88_08785 2669b4c9c1c9ac5766ba2d0389479df7 1160 SUPERFAMILY SSF52922 277 355 5.23E-6 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 IX88_08785 2669b4c9c1c9ac5766ba2d0389479df7 1160 Gene3D G3DSA:3.40.50.970 16 231 8.8E-25 T 11-10-2018 IX88_08785 2669b4c9c1c9ac5766ba2d0389479df7 1160 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 747 932 4.4E-27 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 IX88_16080 92e6920ea4d1bdfd23ae2039d9f826af 810 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 264 456 3.2E-20 T 11-10-2018 IPR004477 ComEC/Rec2-related protein IX88_16080 92e6920ea4d1bdfd23ae2039d9f826af 810 Pfam PF13567 Domain of unknown function (DUF4131) 33 188 1.4E-10 T 11-10-2018 IPR025405 Domain of unknown function DUF4131 IX88_16080 92e6920ea4d1bdfd23ae2039d9f826af 810 SMART SM00849 558 754 0.0048 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_16080 92e6920ea4d1bdfd23ae2039d9f826af 810 Gene3D G3DSA:3.60.15.10 546 797 2.6E-58 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_16080 92e6920ea4d1bdfd23ae2039d9f826af 810 Pfam PF03772 Competence protein 243 522 2.8E-57 T 11-10-2018 IPR004477 ComEC/Rec2-related protein IX88_16080 92e6920ea4d1bdfd23ae2039d9f826af 810 SUPERFAMILY SSF56281 547 796 1.52E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_16080 92e6920ea4d1bdfd23ae2039d9f826af 810 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 138 783 1.5E-94 T 11-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 IX88_16080 92e6920ea4d1bdfd23ae2039d9f826af 810 Pfam PF00753 Metallo-beta-lactamase superfamily 555 645 5.3E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_13470 cadd159cbf007c35443965186f4874e7 301 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 298 1.0E-88 T 11-10-2018 IX88_13470 cadd159cbf007c35443965186f4874e7 301 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 297 31.973 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 IX88_13470 cadd159cbf007c35443965186f4874e7 301 PIRSF PIRSF000401 1 299 7.5E-85 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 IX88_13470 cadd159cbf007c35443965186f4874e7 301 SUPERFAMILY SSF53335 63 290 4.33E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_13470 cadd159cbf007c35443965186f4874e7 301 Gene3D G3DSA:3.40.50.150 102 301 1.2E-54 T 11-10-2018 IX88_13470 cadd159cbf007c35443965186f4874e7 301 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 291 1.8E-85 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 IX88_09005 19c04fe17a9c83c613210d8999d845b3 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 8.7E-60 T 11-10-2018 IX88_09005 19c04fe17a9c83c613210d8999d845b3 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.3E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_09005 19c04fe17a9c83c613210d8999d845b3 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.3E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_09005 19c04fe17a9c83c613210d8999d845b3 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.3E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_09005 19c04fe17a9c83c613210d8999d845b3 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.3E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_09005 19c04fe17a9c83c613210d8999d845b3 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.3E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_09005 19c04fe17a9c83c613210d8999d845b3 245 SUPERFAMILY SSF51735 6 244 1.88E-71 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_09005 19c04fe17a9c83c613210d8999d845b3 245 Gene3D G3DSA:3.40.50.720 1 245 3.4E-69 T 11-10-2018 IX88_09005 19c04fe17a9c83c613210d8999d845b3 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 0.0025 T 11-10-2018 IX88_09005 19c04fe17a9c83c613210d8999d845b3 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.1E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_09005 19c04fe17a9c83c613210d8999d845b3 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 6.1E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_09005 19c04fe17a9c83c613210d8999d845b3 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.1E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07555 5a8fbdd7d60dcf84ac91e14ff6e79282 456 Gene3D G3DSA:3.90.220.20 243 387 1.8E-87 T 11-10-2018 IX88_07555 5a8fbdd7d60dcf84ac91e14ff6e79282 456 Pfam PF01420 Type I restriction modification DNA specificity domain 299 408 7.3E-7 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 IX88_07555 5a8fbdd7d60dcf84ac91e14ff6e79282 456 Pfam PF01420 Type I restriction modification DNA specificity domain 22 202 1.4E-16 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 IX88_07555 5a8fbdd7d60dcf84ac91e14ff6e79282 456 SUPERFAMILY SSF116734 223 443 6.7E-36 T 11-10-2018 IX88_07555 5a8fbdd7d60dcf84ac91e14ff6e79282 456 Gene3D G3DSA:3.90.220.20 19 438 1.8E-87 T 11-10-2018 IX88_07555 5a8fbdd7d60dcf84ac91e14ff6e79282 456 Gene3D G3DSA:1.10.287.1120 171 434 1.8E-87 T 11-10-2018 IX88_07555 5a8fbdd7d60dcf84ac91e14ff6e79282 456 SUPERFAMILY SSF116734 7 224 8.83E-54 T 11-10-2018 IX88_01325 1a9b880b2eb5073dbe6ccd5ed0e81722 649 Pfam PF00501 AMP-binding enzyme 81 520 2.5E-94 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IX88_01325 1a9b880b2eb5073dbe6ccd5ed0e81722 649 Gene3D G3DSA:3.40.50.12780 48 513 5.4E-108 T 11-10-2018 IX88_01325 1a9b880b2eb5073dbe6ccd5ed0e81722 649 SUPERFAMILY SSF56801 19 644 2.35E-186 T 11-10-2018 IX88_01325 1a9b880b2eb5073dbe6ccd5ed0e81722 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 259 270 - T 11-10-2018 IPR020845 AMP-binding, conserved site IX88_01325 1a9b880b2eb5073dbe6ccd5ed0e81722 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 641 1.1E-302 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 IX88_01325 1a9b880b2eb5073dbe6ccd5ed0e81722 649 Gene3D G3DSA:3.30.300.30 516 645 6.3E-30 T 11-10-2018 IX88_01325 1a9b880b2eb5073dbe6ccd5ed0e81722 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 643 52.102 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 IX88_01325 1a9b880b2eb5073dbe6ccd5ed0e81722 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 22 79 1.2E-19 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 IX88_01325 1a9b880b2eb5073dbe6ccd5ed0e81722 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 529 607 1.4E-25 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IX88_01830 450333d3937abe372e083e7040d425b4 250 SMART SM00345 26 85 9.2E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_01830 450333d3937abe372e083e7040d425b4 250 Gene3D G3DSA:3.40.1410.10 105 239 1.5E-30 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IX88_01830 450333d3937abe372e083e7040d425b4 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 4.5E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_01830 450333d3937abe372e083e7040d425b4 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 4.5E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_01830 450333d3937abe372e083e7040d425b4 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 85 4.6E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_01830 450333d3937abe372e083e7040d425b4 250 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 21 249 2.9E-100 T 11-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 IX88_01830 450333d3937abe372e083e7040d425b4 250 SUPERFAMILY SSF46785 16 89 8.91E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_01830 450333d3937abe372e083e7040d425b4 250 SMART SM00866 106 243 5.1E-33 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 IX88_01830 450333d3937abe372e083e7040d425b4 250 SUPERFAMILY SSF64288 110 249 3.14E-40 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IX88_01830 450333d3937abe372e083e7040d425b4 250 Gene3D G3DSA:1.10.10.10 18 86 4.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_01830 450333d3937abe372e083e7040d425b4 250 Pfam PF07702 UTRA domain 107 242 3.5E-33 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 IX88_15425 4fc85a8497a2c355125a31180582a6ed 465 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 261 462 6.0E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_15425 4fc85a8497a2c355125a31180582a6ed 465 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 222 462 4.1E-64 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 IX88_15425 4fc85a8497a2c355125a31180582a6ed 465 SUPERFAMILY SSF161098 240 451 1.57E-35 T 11-10-2018 IPR035906 MetI-like superfamily IX88_15425 4fc85a8497a2c355125a31180582a6ed 465 Pfam PF11812 Domain of unknown function (DUF3333) 32 196 2.2E-43 T 11-10-2018 IPR024573 Domain of unknown function DUF3333 IX88_15425 4fc85a8497a2c355125a31180582a6ed 465 Gene3D G3DSA:1.10.3720.10 237 463 4.8E-34 T 11-10-2018 IPR035906 MetI-like superfamily IX88_09490 a3045f80aeba5a5ad0c81e5162724324 299 SUPERFAMILY SSF53850 91 297 4.25E-24 T 11-10-2018 IX88_09490 a3045f80aeba5a5ad0c81e5162724324 299 Gene3D G3DSA:1.10.10.10 1 86 1.1E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_09490 a3045f80aeba5a5ad0c81e5162724324 299 Pfam PF03466 LysR substrate binding domain 90 294 8.7E-24 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_09490 a3045f80aeba5a5ad0c81e5162724324 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 4.9E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_09490 a3045f80aeba5a5ad0c81e5162724324 299 Gene3D G3DSA:3.40.190.290 95 295 1.6E-26 T 11-10-2018 IX88_09490 a3045f80aeba5a5ad0c81e5162724324 299 SUPERFAMILY SSF46785 5 84 1.63E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.2E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 2.2E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.2E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.2E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 2.2E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.2E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 2.2E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 2.2E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 2.2E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 SUPERFAMILY SSF82714 705 796 8.24E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 Gene3D G3DSA:3.30.70.1430 40 807 0.0 T 11-10-2018 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 SUPERFAMILY SSF82693 558 650 6.98E-13 T 11-10-2018 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 SUPERFAMILY SSF82693 40 134 2.88E-23 T 11-10-2018 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 Pfam PF00873 AcrB/AcrD/AcrF family 4 1016 7.7E-272 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 SUPERFAMILY SSF82866 289 489 8.89E-47 T 11-10-2018 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 Gene3D G3DSA:3.30.2090.10 704 799 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 Gene3D G3DSA:3.30.2090.10 178 268 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 Gene3D G3DSA:3.30.70.1430 559 654 0.0 T 11-10-2018 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 Gene3D G3DSA:1.20.1640.10 10 504 0.0 T 11-10-2018 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 Gene3D G3DSA:1.20.1640.10 505 1013 0.0 T 11-10-2018 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 Gene3D G3DSA:3.30.70.1440 655 856 0.0 T 11-10-2018 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 SUPERFAMILY SSF82693 136 323 3.53E-22 T 11-10-2018 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 SUPERFAMILY SSF82866 797 1018 3.66E-49 T 11-10-2018 IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 SUPERFAMILY SSF82714 182 264 4.05E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_17275 f57b51fe723139373fd72d588c50ff29 1032 Gene3D G3DSA:3.30.70.1320 134 325 0.0 T 11-10-2018 IX88_17040 6f05f80705c09eb6c6d9b37505315751 205 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 160 4.4E-14 T 11-10-2018 IX88_17040 6f05f80705c09eb6c6d9b37505315751 205 Gene3D G3DSA:3.90.1470.10 13 128 1.3E-78 T 11-10-2018 IX88_17040 6f05f80705c09eb6c6d9b37505315751 205 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 1 201 3.4E-96 T 11-10-2018 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 IX88_17040 6f05f80705c09eb6c6d9b37505315751 205 Gene3D G3DSA:3.40.50.1000 3 191 1.3E-78 T 11-10-2018 IPR023214 HAD superfamily IX88_17040 6f05f80705c09eb6c6d9b37505315751 205 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 160 1.7E-10 T 11-10-2018 IX88_17040 6f05f80705c09eb6c6d9b37505315751 205 SUPERFAMILY SSF56784 1 196 1.71E-44 T 11-10-2018 IPR036412 HAD-like superfamily IX88_12215 95b06df9a2d1a46dd9ee76eb5cfe5b2d 161 SUPERFAMILY SSF54690 7 139 6.28E-39 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 IX88_12215 95b06df9a2d1a46dd9ee76eb5cfe5b2d 161 Gene3D G3DSA:3.90.1170.40 1 136 4.0E-42 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 IX88_12215 95b06df9a2d1a46dd9ee76eb5cfe5b2d 161 Pfam PF02391 MoaE protein 7 119 9.7E-34 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 IX88_00880 ff92bb8ff43b3ae156b2964c781eae83 126 SMART SM00671 74 110 2.1E-6 T 11-10-2018 IPR006597 Sel1-like repeat IX88_00880 ff92bb8ff43b3ae156b2964c781eae83 126 SUPERFAMILY SSF81901 57 117 3.01E-13 T 11-10-2018 IX88_00880 ff92bb8ff43b3ae156b2964c781eae83 126 Pfam PF08238 Sel1 repeat 53 73 7.1 T 11-10-2018 IPR006597 Sel1-like repeat IX88_00880 ff92bb8ff43b3ae156b2964c781eae83 126 Pfam PF08238 Sel1 repeat 74 110 1.3E-9 T 11-10-2018 IPR006597 Sel1-like repeat IX88_00880 ff92bb8ff43b3ae156b2964c781eae83 126 Gene3D G3DSA:1.25.40.10 21 125 6.1E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_15675 803bc701ca3b16d6b864f3fd67b72832 341 Gene3D G3DSA:1.10.1200.80 251 326 2.7E-14 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 IX88_15675 803bc701ca3b16d6b864f3fd67b72832 341 Gene3D G3DSA:3.20.20.70 6 249 1.5E-77 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_15675 803bc701ca3b16d6b864f3fd67b72832 341 SUPERFAMILY SSF51395 10 318 1.23E-89 T 11-10-2018 IX88_15675 803bc701ca3b16d6b864f3fd67b72832 341 PIRSF PIRSF006621 1 327 4.7E-104 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 IX88_15675 803bc701ca3b16d6b864f3fd67b72832 341 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 4.1E-120 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 IX88_15675 803bc701ca3b16d6b864f3fd67b72832 341 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 48.357 T 11-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 IX88_15675 803bc701ca3b16d6b864f3fd67b72832 341 Pfam PF01207 Dihydrouridine synthase (Dus) 13 314 3.2E-101 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 IX88_15675 803bc701ca3b16d6b864f3fd67b72832 341 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 IX88_04465 0631ae4b1adce26fcefc702cdd9f4d77 636 SUPERFAMILY SSF52540 308 526 1.66E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04465 0631ae4b1adce26fcefc702cdd9f4d77 636 Gene3D G3DSA:3.40.50.300 281 554 1.5E-59 T 11-10-2018 IX88_04465 0631ae4b1adce26fcefc702cdd9f4d77 636 Gene3D G3DSA:1.10.287.380 555 636 8.1E-22 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 IX88_04465 0631ae4b1adce26fcefc702cdd9f4d77 636 SMART SM00382 343 513 1.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_04465 0631ae4b1adce26fcefc702cdd9f4d77 636 SMART SM00382 28 230 2.3E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_04465 0631ae4b1adce26fcefc702cdd9f4d77 636 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_04465 0631ae4b1adce26fcefc702cdd9f4d77 636 Pfam PF12848 ABC transporter 223 296 7.7E-12 T 11-10-2018 IPR032781 ABC-transporter extension domain IX88_04465 0631ae4b1adce26fcefc702cdd9f4d77 636 Gene3D G3DSA:3.40.50.300 4 278 6.5E-65 T 11-10-2018 IX88_04465 0631ae4b1adce26fcefc702cdd9f4d77 636 Pfam PF00005 ABC transporter 19 183 2.9E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_04465 0631ae4b1adce26fcefc702cdd9f4d77 636 SUPERFAMILY SSF52540 3 242 3.07E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04465 0631ae4b1adce26fcefc702cdd9f4d77 636 Pfam PF16326 ABC transporter C-terminal domain 562 631 1.7E-19 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 IX88_04465 0631ae4b1adce26fcefc702cdd9f4d77 636 Pfam PF00005 ABC transporter 336 467 5.5E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_06700 89406beab25935150b36eeab2a4cb2e3 664 Gene3D G3DSA:3.20.20.80 302 661 3.3E-139 T 11-10-2018 IX88_06700 89406beab25935150b36eeab2a4cb2e3 664 SUPERFAMILY SSF88713 53 280 5.28E-36 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 IX88_06700 89406beab25935150b36eeab2a4cb2e3 664 Pfam PF01522 Polysaccharide deacetylase 93 257 1.2E-24 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 IX88_06700 89406beab25935150b36eeab2a4cb2e3 664 Gene3D G3DSA:3.20.20.370 28 296 3.7E-71 T 11-10-2018 IX88_06700 89406beab25935150b36eeab2a4cb2e3 664 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 37 657 1.6E-265 T 11-10-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0043708 IX88_06700 89406beab25935150b36eeab2a4cb2e3 664 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 313 637 1.2E-145 T 11-10-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal IX88_06485 7eb0a4a4de4df2006f52ab3208d16c66 157 SUPERFAMILY SSF82784 4 150 5.5E-40 T 11-10-2018 IPR036102 OsmC/Ohr superfamily IX88_06485 7eb0a4a4de4df2006f52ab3208d16c66 157 Pfam PF02566 OsmC-like protein 53 150 3.6E-12 T 11-10-2018 IPR003718 OsmC/Ohr family IX88_06485 7eb0a4a4de4df2006f52ab3208d16c66 157 Gene3D G3DSA:3.30.300.20 1 151 1.8E-47 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta IX88_16035 6e5f58c78bf8c0564316a73914ea299f 808 TIGRFAM TIGR04214 CSLREA_Nterm: CSLREA domain 30 53 5.1E-11 T 11-10-2018 IPR026457 CSLREA domain IX88_16035 6e5f58c78bf8c0564316a73914ea299f 808 SUPERFAMILY SSF51126 10 338 3.93E-12 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor IX88_17445 a2a1381084bebe302039fc5c1c0abc81 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 1.1E-134 T 11-10-2018 IPR002155 Thiolase GO:0016747 IX88_17445 a2a1381084bebe302039fc5c1c0abc81 401 SUPERFAMILY SSF53901 279 400 3.93E-45 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_17445 a2a1381084bebe302039fc5c1c0abc81 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 IX88_17445 a2a1381084bebe302039fc5c1c0abc81 401 Gene3D G3DSA:3.40.47.10 6 298 3.2E-146 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_17445 a2a1381084bebe302039fc5c1c0abc81 401 Pfam PF00108 Thiolase, N-terminal domain 5 228 6.5E-47 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 IX88_17445 a2a1381084bebe302039fc5c1c0abc81 401 SUPERFAMILY SSF53901 3 278 4.08E-63 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_17445 a2a1381084bebe302039fc5c1c0abc81 401 Gene3D G3DSA:3.40.47.10 125 396 3.2E-146 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_17445 a2a1381084bebe302039fc5c1c0abc81 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 IX88_17445 a2a1381084bebe302039fc5c1c0abc81 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 IX88_17445 a2a1381084bebe302039fc5c1c0abc81 401 Pfam PF02803 Thiolase, C-terminal domain 278 400 1.8E-47 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 IX88_17445 a2a1381084bebe302039fc5c1c0abc81 401 PIRSF PIRSF000429 1 401 5.8E-115 T 11-10-2018 IPR002155 Thiolase GO:0016747 IX88_12805 8bb35d637ed88d95e55465083c74e135 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 350 358 6.0E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_12805 8bb35d637ed88d95e55465083c74e135 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 297 308 6.0E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_12805 8bb35d637ed88d95e55465083c74e135 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 370 389 6.0E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_12805 8bb35d637ed88d95e55465083c74e135 463 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 357 385 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_12805 8bb35d637ed88d95e55465083c74e135 463 SUPERFAMILY SSF51735 222 457 2.21E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_12805 8bb35d637ed88d95e55465083c74e135 463 Gene3D G3DSA:3.40.50.720 221 462 9.0E-61 T 11-10-2018 IX88_12805 8bb35d637ed88d95e55465083c74e135 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 344 360 8.2E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_12805 8bb35d637ed88d95e55465083c74e135 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 423 443 8.2E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_12805 8bb35d637ed88d95e55465083c74e135 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 297 308 8.2E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_12805 8bb35d637ed88d95e55465083c74e135 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 390 407 8.2E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_12805 8bb35d637ed88d95e55465083c74e135 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 244 8.2E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_12805 8bb35d637ed88d95e55465083c74e135 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 370 389 8.2E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_12805 8bb35d637ed88d95e55465083c74e135 463 Gene3D G3DSA:3.40.50.720 24 219 4.0E-57 T 11-10-2018 IX88_12805 8bb35d637ed88d95e55465083c74e135 463 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 232 456 1.5E-45 T 11-10-2018 IX88_12805 8bb35d637ed88d95e55465083c74e135 463 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 226 400 2.2E-5 T 11-10-2018 IX88_15105 897a933c7d1527f355eb2bbce8cddc99 231 SUPERFAMILY SSF160443 143 219 2.75E-13 T 11-10-2018 IPR036063 Smr domain superfamily IX88_15105 897a933c7d1527f355eb2bbce8cddc99 231 Gene3D G3DSA:3.30.1370.110 95 224 7.4E-33 T 11-10-2018 IX88_15105 897a933c7d1527f355eb2bbce8cddc99 231 Pfam PF01713 Smr domain 143 219 8.5E-20 T 11-10-2018 IPR002625 Smr domain IX88_15105 897a933c7d1527f355eb2bbce8cddc99 231 SMART SM00463 138 219 1.0E-8 T 11-10-2018 IPR002625 Smr domain IX88_14255 1e540e1ce8f6c06e07c4aa984b9fb53f 212 Gene3D G3DSA:3.90.320.10 1 204 5.7E-44 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal IX88_14255 1e540e1ce8f6c06e07c4aa984b9fb53f 212 SUPERFAMILY SSF52980 5 148 1.82E-7 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 IX88_01555 54aec6666ae0a81a818beb150ec0141f 241 Gene3D G3DSA:2.40.230.20 17 235 2.4E-23 T 11-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 IX88_01555 54aec6666ae0a81a818beb150ec0141f 241 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 57 191 7.9E-9 T 11-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 IX88_01555 54aec6666ae0a81a818beb150ec0141f 241 SUPERFAMILY SSF111364 25 241 1.44E-63 T 11-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 IX88_06730 0941bd8e9033bf01d22c188fc9b6ffda 270 Gene3D G3DSA:3.30.450.40 91 269 7.2E-38 T 11-10-2018 IPR029016 GAF-like domain superfamily IX88_06730 0941bd8e9033bf01d22c188fc9b6ffda 270 Pfam PF01614 Bacterial transcriptional regulator 141 267 4.2E-35 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal IX88_06730 0941bd8e9033bf01d22c188fc9b6ffda 270 SUPERFAMILY SSF55781 88 268 2.03E-35 T 11-10-2018 IX88_06730 0941bd8e9033bf01d22c188fc9b6ffda 270 SUPERFAMILY SSF46785 24 95 4.6E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_06730 0941bd8e9033bf01d22c188fc9b6ffda 270 Gene3D G3DSA:1.10.10.10 8 90 2.4E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_06730 0941bd8e9033bf01d22c188fc9b6ffda 270 Pfam PF09339 IclR helix-turn-helix domain 26 74 9.6E-17 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 IX88_06730 0941bd8e9033bf01d22c188fc9b6ffda 270 SMART SM00346 23 112 1.1E-34 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 IX88_02310 7121d3bfa65be13a7f09f565b3220081 373 Gene3D G3DSA:3.40.50.20 1 101 3.0E-27 T 11-10-2018 IX88_02310 7121d3bfa65be13a7f09f565b3220081 373 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 4 347 39.213 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 IX88_02310 7121d3bfa65be13a7f09f565b3220081 373 Gene3D G3DSA:3.30.470.20 177 366 6.2E-70 T 11-10-2018 IX88_02310 7121d3bfa65be13a7f09f565b3220081 373 SUPERFAMILY SSF56059 97 295 3.71E-63 T 11-10-2018 IX88_02310 7121d3bfa65be13a7f09f565b3220081 373 Gene3D G3DSA:3.30.1490.20 102 176 1.2E-26 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 IX88_02310 7121d3bfa65be13a7f09f565b3220081 373 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 351 2.1E-113 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 IX88_02310 7121d3bfa65be13a7f09f565b3220081 373 SUPERFAMILY SSF51246 299 364 5.96E-16 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 IX88_02310 7121d3bfa65be13a7f09f565b3220081 373 Pfam PF02222 ATP-grasp domain 106 275 1.5E-56 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type IX88_02310 7121d3bfa65be13a7f09f565b3220081 373 SUPERFAMILY SSF52440 3 96 1.14E-16 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily IX88_12285 1fcf11f7e5afe9f1453c61dd7433509a 456 Gene3D G3DSA:3.30.470.20 87 430 1.4E-146 T 11-10-2018 IX88_12285 1fcf11f7e5afe9f1453c61dd7433509a 456 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 320 1.3E-74 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IX88_12285 1fcf11f7e5afe9f1453c61dd7433509a 456 Gene3D G3DSA:3.30.1490.20 131 201 1.4E-146 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 IX88_12285 1fcf11f7e5afe9f1453c61dd7433509a 456 Pfam PF02785 Biotin carboxylase C-terminal domain 334 440 2.4E-37 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IX88_12285 1fcf11f7e5afe9f1453c61dd7433509a 456 SUPERFAMILY SSF51246 329 442 6.28E-41 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 IX88_12285 1fcf11f7e5afe9f1453c61dd7433509a 456 Gene3D G3DSA:3.40.50.20 1 85 1.6E-34 T 11-10-2018 IX88_12285 1fcf11f7e5afe9f1453c61dd7433509a 456 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IX88_12285 1fcf11f7e5afe9f1453c61dd7433509a 456 SUPERFAMILY SSF52440 1 113 1.08E-47 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily IX88_12285 1fcf11f7e5afe9f1453c61dd7433509a 456 SMART SM00878 334 440 5.2E-61 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IX88_12285 1fcf11f7e5afe9f1453c61dd7433509a 456 SUPERFAMILY SSF56059 83 345 3.36E-67 T 11-10-2018 IX88_12285 1fcf11f7e5afe9f1453c61dd7433509a 456 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 8.8E-44 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IX88_12285 1fcf11f7e5afe9f1453c61dd7433509a 456 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 284 291 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IX88_12285 1fcf11f7e5afe9f1453c61dd7433509a 456 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 1.2E-208 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 IX88_05760 0a59cd2e280733c54da7c38c3f11a543 443 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 19 429 1.6E-179 T 11-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05760 0a59cd2e280733c54da7c38c3f11a543 443 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 59 230 1.0E-49 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05760 0a59cd2e280733c54da7c38c3f11a543 443 SUPERFAMILY SSF142984 254 337 4.84E-21 T 11-10-2018 IX88_05760 0a59cd2e280733c54da7c38c3f11a543 443 SMART SM00928 342 387 4.6E-21 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05760 0a59cd2e280733c54da7c38c3f11a543 443 Pfam PF10531 SLBB domain 259 304 5.1E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05760 0a59cd2e280733c54da7c38c3f11a543 443 Gene3D G3DSA:3.40.50.11540 64 241 4.2E-78 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05760 0a59cd2e280733c54da7c38c3f11a543 443 Gene3D G3DSA:3.10.20.600 245 339 1.6E-28 T 11-10-2018 IX88_05760 0a59cd2e280733c54da7c38c3f11a543 443 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 345 427 2.6E-25 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05760 0a59cd2e280733c54da7c38c3f11a543 443 Gene3D G3DSA:1.20.1440.230 340 441 4.7E-27 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05760 0a59cd2e280733c54da7c38c3f11a543 443 SUPERFAMILY SSF140490 339 432 7.45E-31 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05760 0a59cd2e280733c54da7c38c3f11a543 443 SUPERFAMILY SSF142019 22 245 7.45E-85 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05760 0a59cd2e280733c54da7c38c3f11a543 443 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 355 366 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05760 0a59cd2e280733c54da7c38c3f11a543 443 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 178 193 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_11005 a4138344565cc209e3c5836b7d985346 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 6.3E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_11005 a4138344565cc209e3c5836b7d985346 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 6.3E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_11005 a4138344565cc209e3c5836b7d985346 188 SUPERFAMILY SSF46689 12 69 1.39E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_11005 a4138344565cc209e3c5836b7d985346 188 Gene3D G3DSA:1.10.357.10 5 181 5.2E-21 T 11-10-2018 IX88_11005 a4138344565cc209e3c5836b7d985346 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 57 6.1E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_04555 cc811a52bddec042194a8a3ee6a4c02c 287 PIRSF PIRSF036480 6 287 1.3E-111 T 11-10-2018 IX88_04555 cc811a52bddec042194a8a3ee6a4c02c 287 Pfam PF01842 ACT domain 10 70 4.9E-8 T 11-10-2018 IPR002912 ACT domain IX88_04555 cc811a52bddec042194a8a3ee6a4c02c 287 Pfam PF00551 Formyl transferase 94 269 1.9E-35 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 IX88_04555 cc811a52bddec042194a8a3ee6a4c02c 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 95 117 1.8E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 IX88_04555 cc811a52bddec042194a8a3ee6a4c02c 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 117 144 1.8E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 IX88_04555 cc811a52bddec042194a8a3ee6a4c02c 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 261 286 1.8E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 IX88_04555 cc811a52bddec042194a8a3ee6a4c02c 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 1.8E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 IX88_04555 cc811a52bddec042194a8a3ee6a4c02c 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 44 56 1.8E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 IX88_04555 cc811a52bddec042194a8a3ee6a4c02c 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 239 261 1.8E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 IX88_04555 cc811a52bddec042194a8a3ee6a4c02c 287 SUPERFAMILY SSF55021 8 91 1.52E-14 T 11-10-2018 IX88_04555 cc811a52bddec042194a8a3ee6a4c02c 287 Gene3D G3DSA:3.30.70.260 7 91 4.0E-23 T 11-10-2018 IX88_04555 cc811a52bddec042194a8a3ee6a4c02c 287 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 10 287 4.7E-117 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 IX88_04555 cc811a52bddec042194a8a3ee6a4c02c 287 SUPERFAMILY SSF53328 94 287 7.46E-57 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 IX88_04555 cc811a52bddec042194a8a3ee6a4c02c 287 Gene3D G3DSA:3.40.50.170 94 287 4.5E-68 T 11-10-2018 IX88_04555 cc811a52bddec042194a8a3ee6a4c02c 287 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 287 43.784 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 IX88_12755 29fa4f980f0a68a96c34150fd8304974 144 Pfam PF13279 Thioesterase-like superfamily 21 136 1.0E-13 T 11-10-2018 IX88_12755 29fa4f980f0a68a96c34150fd8304974 144 SUPERFAMILY SSF54637 10 143 3.09E-35 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_12755 29fa4f980f0a68a96c34150fd8304974 144 Gene3D G3DSA:3.10.129.10 2 142 5.0E-46 T 11-10-2018 IX88_10060 bb90d6d1c807fd584282335e7f2df737 172 Gene3D G3DSA:1.10.287.110 1 74 7.2E-18 T 11-10-2018 IPR036869 Chaperone J-domain superfamily IX88_10060 bb90d6d1c807fd584282335e7f2df737 172 SUPERFAMILY SSF46565 1 68 3.53E-14 T 11-10-2018 IPR036869 Chaperone J-domain superfamily IX88_10060 bb90d6d1c807fd584282335e7f2df737 172 Pfam PF07743 HSCB C-terminal oligomerisation domain 82 153 3.8E-14 T 11-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 IX88_10060 bb90d6d1c807fd584282335e7f2df737 172 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 15 158 3.7E-27 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 IX88_10060 bb90d6d1c807fd584282335e7f2df737 172 Gene3D G3DSA:1.20.1280.20 75 161 4.6E-19 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 IX88_10060 bb90d6d1c807fd584282335e7f2df737 172 SMART SM00271 1 61 3.4E-8 T 11-10-2018 IPR001623 DnaJ domain IX88_10060 bb90d6d1c807fd584282335e7f2df737 172 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 160 17.392 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 IX88_10060 bb90d6d1c807fd584282335e7f2df737 172 Pfam PF00226 DnaJ domain 5 65 1.9E-8 T 11-10-2018 IPR001623 DnaJ domain IX88_10060 bb90d6d1c807fd584282335e7f2df737 172 SUPERFAMILY SSF47144 75 161 2.35E-18 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 IX88_09375 cfed518364f2115add4b1caceb78fd1e 356 SUPERFAMILY SSF55021 265 351 1.04E-10 T 11-10-2018 IX88_09375 cfed518364f2115add4b1caceb78fd1e 356 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_09375 cfed518364f2115add4b1caceb78fd1e 356 SMART SM00930 274 349 1.7E-4 T 11-10-2018 IPR018449 NIL domain IX88_09375 cfed518364f2115add4b1caceb78fd1e 356 Gene3D G3DSA:3.40.50.300 13 264 3.6E-74 T 11-10-2018 IX88_09375 cfed518364f2115add4b1caceb78fd1e 356 Gene3D G3DSA:3.30.70.260 265 356 6.6E-9 T 11-10-2018 IX88_09375 cfed518364f2115add4b1caceb78fd1e 356 SMART SM00382 43 231 2.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_09375 cfed518364f2115add4b1caceb78fd1e 356 Pfam PF00005 ABC transporter 34 182 2.2E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_09375 cfed518364f2115add4b1caceb78fd1e 356 SUPERFAMILY SSF52540 15 252 2.01E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_09375 cfed518364f2115add4b1caceb78fd1e 356 Pfam PF09383 NIL domain 277 327 1.9E-7 T 11-10-2018 IPR018449 NIL domain IX88_03320 33b8be22dd771db3afc30dea1a765524 495 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 3.7E-45 T 11-10-2018 IX88_03320 33b8be22dd771db3afc30dea1a765524 495 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 491 5.4E-190 T 11-10-2018 IPR004482 Mg chelatase-related protein IX88_03320 33b8be22dd771db3afc30dea1a765524 495 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 392 1.4E-95 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain IX88_03320 33b8be22dd771db3afc30dea1a765524 495 Gene3D G3DSA:3.30.230.10 13 169 1.1E-13 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IX88_03320 33b8be22dd771db3afc30dea1a765524 495 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 400 491 3.7E-27 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain IX88_03320 33b8be22dd771db3afc30dea1a765524 495 SUPERFAMILY SSF54211 11 169 9.86E-37 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_03320 33b8be22dd771db3afc30dea1a765524 495 SUPERFAMILY SSF52540 188 491 1.61E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_03320 33b8be22dd771db3afc30dea1a765524 495 Gene3D G3DSA:3.40.50.300 186 493 5.1E-54 T 11-10-2018 IX88_03320 33b8be22dd771db3afc30dea1a765524 495 SMART SM00382 210 389 1.6E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_01000 8756e4958d43bdf021f6d5f5c791ec00 252 Pfam PF00977 Histidine biosynthesis protein 5 235 3.4E-89 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 IX88_01000 8756e4958d43bdf021f6d5f5c791ec00 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 2.4E-113 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 IX88_01000 8756e4958d43bdf021f6d5f5c791ec00 252 Gene3D G3DSA:3.20.20.70 1 252 3.2E-110 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_01000 8756e4958d43bdf021f6d5f5c791ec00 252 SUPERFAMILY SSF51366 1 251 2.83E-86 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 IX88_01000 8756e4958d43bdf021f6d5f5c791ec00 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 48.784 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 IX88_17230 1bfd3851e48d682be12b470b273b737c 378 SUPERFAMILY SSF53187 3 376 2.0E-62 T 11-10-2018 IX88_17230 1bfd3851e48d682be12b470b273b737c 378 Gene3D G3DSA:3.40.630.10 12 364 1.2E-130 T 11-10-2018 IX88_17230 1bfd3851e48d682be12b470b273b737c 378 SUPERFAMILY SSF55031 181 289 1.64E-31 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain IX88_17230 1bfd3851e48d682be12b470b273b737c 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 8 375 7.0E-172 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 IX88_17230 1bfd3851e48d682be12b470b273b737c 378 Pfam PF01546 Peptidase family M20/M25/M40 64 374 1.2E-42 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 IX88_17230 1bfd3851e48d682be12b470b273b737c 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 53.074 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 IX88_17230 1bfd3851e48d682be12b470b273b737c 378 Gene3D G3DSA:3.30.70.360 181 294 1.2E-130 T 11-10-2018 IX88_17230 1bfd3851e48d682be12b470b273b737c 378 Pfam PF07687 Peptidase dimerisation domain 177 284 1.5E-25 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain IX88_06290 792b9ed2391ecf8017a516a9b42df597 150 PIRSF PIRSF004638 1 150 2.0E-50 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 IX88_06290 792b9ed2391ecf8017a516a9b42df597 150 Pfam PF03653 Uncharacterised protein family (UPF0093) 6 148 8.0E-50 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 IX88_06290 792b9ed2391ecf8017a516a9b42df597 150 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 7 148 6.3E-42 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 IX88_14875 19ed58317dfa9efdede0a372d5a005df 326 PIRSF PIRSF029202 50 325 1.7E-37 T 11-10-2018 IPR020049 Protein of unknown function DUF2184 IX88_14875 19ed58317dfa9efdede0a372d5a005df 326 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 82 324 1.5E-56 T 11-10-2018 IPR020049 Protein of unknown function DUF2184 IX88_15880 e6a4590518b00ec05fa3284c2a87c5a6 307 Pfam PF03466 LysR substrate binding domain 91 279 3.3E-37 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_15880 e6a4590518b00ec05fa3284c2a87c5a6 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_15880 e6a4590518b00ec05fa3284c2a87c5a6 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_15880 e6a4590518b00ec05fa3284c2a87c5a6 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_15880 e6a4590518b00ec05fa3284c2a87c5a6 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.4E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_15880 e6a4590518b00ec05fa3284c2a87c5a6 307 Gene3D G3DSA:1.10.10.10 1 86 4.1E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_15880 e6a4590518b00ec05fa3284c2a87c5a6 307 SUPERFAMILY SSF53850 92 290 7.7E-38 T 11-10-2018 IX88_15880 e6a4590518b00ec05fa3284c2a87c5a6 307 Gene3D G3DSA:3.40.190.10 91 301 4.5E-83 T 11-10-2018 IX88_15880 e6a4590518b00ec05fa3284c2a87c5a6 307 SUPERFAMILY SSF46785 2 113 6.98E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_15880 e6a4590518b00ec05fa3284c2a87c5a6 307 Gene3D G3DSA:3.40.190.10 167 266 4.5E-83 T 11-10-2018 IX88_12720 0cae1a8fe9dd9ce5e66691755519dd86 557 Pfam PF01645 Conserved region in glutamate synthase 181 497 4.4E-88 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 IX88_12720 0cae1a8fe9dd9ce5e66691755519dd86 557 Gene3D G3DSA:3.20.20.70 119 530 1.7E-109 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_12720 0cae1a8fe9dd9ce5e66691755519dd86 557 PIRSF PIRSF006429 32 557 3.4E-162 T 11-10-2018 IPR024188 Glutamate synthase large subunit-like protein IX88_12720 0cae1a8fe9dd9ce5e66691755519dd86 557 PIRSF PIRSF500060 34 557 4.6E-230 T 11-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria IX88_12720 0cae1a8fe9dd9ce5e66691755519dd86 557 SUPERFAMILY SSF51395 36 526 4.08E-134 T 11-10-2018 IX88_00205 0f219defe7f4c3230ebf8ee7a11180eb 315 Pfam PF10118 Predicted metal-dependent hydrolase 22 291 6.2E-66 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_00205 0f219defe7f4c3230ebf8ee7a11180eb 315 PIRSF PIRSF007580 8 311 1.8E-80 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_02985 93309edc71fe0560f6998d4c3905a626 222 Gene3D G3DSA:3.40.30.10 1 83 4.0E-30 T 11-10-2018 IX88_02985 93309edc71fe0560f6998d4c3905a626 222 Gene3D G3DSA:1.20.1050.10 84 208 1.4E-27 T 11-10-2018 IX88_02985 93309edc71fe0560f6998d4c3905a626 222 Pfam PF14497 Glutathione S-transferase, C-terminal domain 135 206 3.1E-8 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal IX88_02985 93309edc71fe0560f6998d4c3905a626 222 SUPERFAMILY SSF52833 5 80 3.47E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_02985 93309edc71fe0560f6998d4c3905a626 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 73 7.6E-16 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 IX88_02985 93309edc71fe0560f6998d4c3905a626 222 SUPERFAMILY SSF47616 84 208 1.1E-20 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IX88_10815 eb4cc7fc77093cc7b68b0ca77d1a35d2 387 Gene3D G3DSA:2.40.180.20 94 357 4.5E-25 T 11-10-2018 IX88_10815 eb4cc7fc77093cc7b68b0ca77d1a35d2 387 Pfam PF00199 Catalase 88 194 3.5E-8 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 IX88_10815 eb4cc7fc77093cc7b68b0ca77d1a35d2 387 SUPERFAMILY SSF56634 80 378 1.96E-54 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 IX88_10815 eb4cc7fc77093cc7b68b0ca77d1a35d2 387 Gene3D G3DSA:1.20.1280.120 81 368 4.5E-25 T 11-10-2018 IX88_03410 9ff15777f350fc0786673dd8eed47580 211 SUPERFAMILY SSF52172 3 176 3.37E-34 T 11-10-2018 IPR011006 CheY-like superfamily IX88_03410 9ff15777f350fc0786673dd8eed47580 211 Pfam PF00072 Response regulator receiver domain 4 116 6.6E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_03410 9ff15777f350fc0786673dd8eed47580 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 203 6.6E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_03410 9ff15777f350fc0786673dd8eed47580 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.9E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_03410 9ff15777f350fc0786673dd8eed47580 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.9E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_03410 9ff15777f350fc0786673dd8eed47580 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.9E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_03410 9ff15777f350fc0786673dd8eed47580 211 SMART SM00448 2 115 1.9E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_03410 9ff15777f350fc0786673dd8eed47580 211 SMART SM00421 146 203 3.9E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_03410 9ff15777f350fc0786673dd8eed47580 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_03410 9ff15777f350fc0786673dd8eed47580 211 Gene3D G3DSA:3.40.50.12740 2 209 9.3E-62 T 11-10-2018 IX88_01515 02dccfc23f960b38aa1313902b042a8c 604 Gene3D G3DSA:2.60.40.1250 22 147 1.8E-31 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily IX88_01515 02dccfc23f960b38aa1313902b042a8c 604 SUPERFAMILY SSF74863 27 135 4.58E-28 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily IX88_01515 02dccfc23f960b38aa1313902b042a8c 604 Gene3D G3DSA:3.40.30.10 473 601 4.7E-23 T 11-10-2018 IX88_01515 02dccfc23f960b38aa1313902b042a8c 604 ProSitePatterns PS00194 Thioredoxin family active site. 506 524 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 IX88_01515 02dccfc23f960b38aa1313902b042a8c 604 Pfam PF00085 Thioredoxin 487 594 2.0E-8 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 IX88_01515 02dccfc23f960b38aa1313902b042a8c 604 Pfam PF11412 Disulphide bond corrector protein DsbC 28 135 4.4E-27 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain IX88_01515 02dccfc23f960b38aa1313902b042a8c 604 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 210 409 6.0E-17 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 IX88_01515 02dccfc23f960b38aa1313902b042a8c 604 SUPERFAMILY SSF52833 477 595 7.72E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_11945 587da0ed1ecf17211fc8432a7d7d820e 697 SUPERFAMILY SSF141868 440 685 4.05E-64 T 11-10-2018 IPR035919 EAL domain superfamily IX88_11945 587da0ed1ecf17211fc8432a7d7d820e 697 SUPERFAMILY SSF55785 121 246 7.15E-11 T 11-10-2018 IPR035965 PAS domain superfamily IX88_11945 587da0ed1ecf17211fc8432a7d7d820e 697 SUPERFAMILY SSF55073 264 423 2.04E-44 T 11-10-2018 IPR029787 Nucleotide cyclase IX88_11945 587da0ed1ecf17211fc8432a7d7d820e 697 Gene3D G3DSA:3.30.450.20 123 256 1.3E-11 T 11-10-2018 IX88_11945 587da0ed1ecf17211fc8432a7d7d820e 697 Pfam PF08447 PAS fold 48 105 4.3E-6 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 IX88_11945 587da0ed1ecf17211fc8432a7d7d820e 697 SMART SM00052 431 678 9.2E-60 T 11-10-2018 IPR001633 EAL domain IX88_11945 587da0ed1ecf17211fc8432a7d7d820e 697 SUPERFAMILY SSF55785 13 119 2.27E-9 T 11-10-2018 IPR035965 PAS domain superfamily IX88_11945 587da0ed1ecf17211fc8432a7d7d820e 697 Gene3D G3DSA:3.30.450.20 7 118 1.1E-10 T 11-10-2018 IX88_11945 587da0ed1ecf17211fc8432a7d7d820e 697 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 258 420 4.1E-37 T 11-10-2018 IPR000160 GGDEF domain IX88_11945 587da0ed1ecf17211fc8432a7d7d820e 697 Pfam PF00563 EAL domain 439 671 6.1E-54 T 11-10-2018 IPR001633 EAL domain IX88_11945 587da0ed1ecf17211fc8432a7d7d820e 697 SMART SM00267 248 421 7.0E-52 T 11-10-2018 IPR000160 GGDEF domain IX88_11945 587da0ed1ecf17211fc8432a7d7d820e 697 SMART SM00091 8 73 2.9E-4 T 11-10-2018 IPR000014 PAS domain IX88_11945 587da0ed1ecf17211fc8432a7d7d820e 697 SMART SM00091 134 201 6.7 T 11-10-2018 IPR000014 PAS domain IX88_11945 587da0ed1ecf17211fc8432a7d7d820e 697 Gene3D G3DSA:3.20.20.450 436 694 9.2E-68 T 11-10-2018 IPR035919 EAL domain superfamily IX88_11945 587da0ed1ecf17211fc8432a7d7d820e 697 Pfam PF00990 Diguanylate cyclase, GGDEF domain 261 415 4.6E-42 T 11-10-2018 IPR000160 GGDEF domain IX88_11945 587da0ed1ecf17211fc8432a7d7d820e 697 Gene3D G3DSA:3.30.70.270 257 435 2.7E-50 T 11-10-2018 IX88_11945 587da0ed1ecf17211fc8432a7d7d820e 697 Pfam PF08448 PAS fold 141 249 9.1E-14 T 11-10-2018 IPR013656 PAS fold-4 IX88_10420 14e9a3724f3815e7070bdbf72eb714bc 401 PIRSF PIRSF001413 2 401 2.7E-160 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 IX88_10420 14e9a3724f3815e7070bdbf72eb714bc 401 Gene3D G3DSA:3.40.50.1100 18 214 6.9E-172 T 11-10-2018 IX88_10420 14e9a3724f3815e7070bdbf72eb714bc 401 Gene3D G3DSA:3.40.50.1100 62 391 6.9E-172 T 11-10-2018 IX88_10420 14e9a3724f3815e7070bdbf72eb714bc 401 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 89 103 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 IX88_10420 14e9a3724f3815e7070bdbf72eb714bc 401 SUPERFAMILY SSF53686 11 397 3.67E-135 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IX88_10420 14e9a3724f3815e7070bdbf72eb714bc 401 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 398 4.3E-167 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 IX88_10420 14e9a3724f3815e7070bdbf72eb714bc 401 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 386 4.6E-48 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme IX88_10420 14e9a3724f3815e7070bdbf72eb714bc 401 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 399 48.945 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 IX88_10660 1869d94197f8ab741fac77002c0667e4 328 Pfam PF12833 Helix-turn-helix domain 245 324 4.5E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_10660 1869d94197f8ab741fac77002c0667e4 328 SMART SM00342 237 324 4.7E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_10660 1869d94197f8ab741fac77002c0667e4 328 SUPERFAMILY SSF46689 274 326 2.11E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_10660 1869d94197f8ab741fac77002c0667e4 328 Gene3D G3DSA:1.10.10.60 221 326 2.0E-28 T 11-10-2018 IX88_10660 1869d94197f8ab741fac77002c0667e4 328 Pfam PF14525 AraC-binding-like domain 21 199 2.0E-22 T 11-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like IX88_10660 1869d94197f8ab741fac77002c0667e4 328 SUPERFAMILY SSF46689 221 271 6.63E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_13295 449c3040aa37c787bb19e199467aa888 324 Pfam PF09084 NMT1/THI5 like 66 249 1.6E-26 T 11-10-2018 IPR015168 SsuA/THI5-like IX88_13295 449c3040aa37c787bb19e199467aa888 324 Gene3D G3DSA:3.40.190.10 111 209 3.1E-73 T 11-10-2018 IX88_13295 449c3040aa37c787bb19e199467aa888 324 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 34 314 2.7E-78 T 11-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 IX88_13295 449c3040aa37c787bb19e199467aa888 324 SUPERFAMILY SSF53850 46 259 1.04E-49 T 11-10-2018 IX88_13295 449c3040aa37c787bb19e199467aa888 324 Gene3D G3DSA:1.10.8.450 241 273 3.1E-73 T 11-10-2018 IX88_13295 449c3040aa37c787bb19e199467aa888 324 SMART SM00062 33 246 3.4E-5 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IX88_13295 449c3040aa37c787bb19e199467aa888 324 Gene3D G3DSA:3.40.190.10 37 305 3.1E-73 T 11-10-2018 IX88_09100 3a9a068f6f0634ea9176a026dbdab70f 312 Gene3D G3DSA:3.30.70.250 121 190 3.5E-66 T 11-10-2018 IX88_09100 3a9a068f6f0634ea9176a026dbdab70f 312 SUPERFAMILY SSF55048 123 183 5.49E-12 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding IX88_09100 3a9a068f6f0634ea9176a026dbdab70f 312 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 4 300 4.6E-103 T 11-10-2018 IPR017554 Malonate decarboxylase, McdH subunit IX88_09100 3a9a068f6f0634ea9176a026dbdab70f 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 295 1.2E-18 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain IX88_09100 3a9a068f6f0634ea9176a026dbdab70f 312 SUPERFAMILY SSF52151 4 290 8.11E-49 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IX88_09100 3a9a068f6f0634ea9176a026dbdab70f 312 Gene3D G3DSA:3.40.366.10 5 280 3.5E-66 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 IX88_09100 3a9a068f6f0634ea9176a026dbdab70f 312 Pfam PF00698 Acyl transferase domain 4 290 2.2E-28 T 11-10-2018 IPR014043 Acyl transferase IX88_09100 3a9a068f6f0634ea9176a026dbdab70f 312 PIRSF PIRSF000446 1 304 6.9E-62 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 IX88_06930 e5492e917dd59cc458d577ac9044b59f 341 SUPERFAMILY SSF53474 55 327 4.86E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_06930 e5492e917dd59cc458d577ac9044b59f 341 Gene3D G3DSA:3.40.50.1820 36 341 5.1E-100 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_06930 e5492e917dd59cc458d577ac9044b59f 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 120 4.6E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_06930 e5492e917dd59cc458d577ac9044b59f 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 272 286 4.6E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_06930 e5492e917dd59cc458d577ac9044b59f 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 165 178 4.6E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_06930 e5492e917dd59cc458d577ac9044b59f 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 151 164 4.6E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_06930 e5492e917dd59cc458d577ac9044b59f 341 Pfam PF12697 Alpha/beta hydrolase family 82 319 3.4E-19 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_16795 0b56f9a168e87f5d88dbcfd148677c33 457 SUPERFAMILY SSF75615 115 211 1.83E-24 T 11-10-2018 IX88_16795 0b56f9a168e87f5d88dbcfd148677c33 457 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 50.09 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 IX88_16795 0b56f9a168e87f5d88dbcfd148677c33 457 Gene3D G3DSA:3.40.1010.10 215 331 1.2E-46 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 IX88_16795 0b56f9a168e87f5d88dbcfd148677c33 457 Pfam PF13241 Putative NAD(P)-binding 7 116 5.4E-25 T 11-10-2018 IX88_16795 0b56f9a168e87f5d88dbcfd148677c33 457 SUPERFAMILY SSF53790 212 456 3.66E-83 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 IX88_16795 0b56f9a168e87f5d88dbcfd148677c33 457 Gene3D G3DSA:3.40.50.720 1 113 3.5E-25 T 11-10-2018 IX88_16795 0b56f9a168e87f5d88dbcfd148677c33 457 Gene3D G3DSA:3.30.950.10 332 457 4.0E-47 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 IX88_16795 0b56f9a168e87f5d88dbcfd148677c33 457 Gene3D G3DSA:3.30.160.110 114 149 1.4E-14 T 11-10-2018 IX88_16795 0b56f9a168e87f5d88dbcfd148677c33 457 SUPERFAMILY SSF51735 2 113 2.86E-19 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_16795 0b56f9a168e87f5d88dbcfd148677c33 457 Pfam PF10414 Sirohaem synthase dimerisation region 152 208 3.6E-18 T 11-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 IX88_16795 0b56f9a168e87f5d88dbcfd148677c33 457 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 451 1.3E-96 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 IX88_16795 0b56f9a168e87f5d88dbcfd148677c33 457 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 208 4.4E-59 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 IX88_16795 0b56f9a168e87f5d88dbcfd148677c33 457 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 1.1E-52 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 IX88_16795 0b56f9a168e87f5d88dbcfd148677c33 457 PIRSF PIRSF036426 1 457 3.4E-198 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 IX88_16795 0b56f9a168e87f5d88dbcfd148677c33 457 Gene3D G3DSA:1.10.8.210 150 211 1.9E-9 T 11-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 IX88_16795 0b56f9a168e87f5d88dbcfd148677c33 457 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 IX88_16795 0b56f9a168e87f5d88dbcfd148677c33 457 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 IX88_16245 e8ee60cede4b41ee39df941079190400 260 SUPERFAMILY SSF51735 6 222 2.86E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_16245 e8ee60cede4b41ee39df941079190400 260 Gene3D G3DSA:3.40.50.720 4 260 2.3E-65 T 11-10-2018 IX88_16245 e8ee60cede4b41ee39df941079190400 260 Pfam PF00106 short chain dehydrogenase 6 193 1.2E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_16245 e8ee60cede4b41ee39df941079190400 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 6.0E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_16245 e8ee60cede4b41ee39df941079190400 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 6.0E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_16245 e8ee60cede4b41ee39df941079190400 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.0E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_16245 e8ee60cede4b41ee39df941079190400 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.0E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_16245 e8ee60cede4b41ee39df941079190400 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.0E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_16245 e8ee60cede4b41ee39df941079190400 260 PIRSF PIRSF000126 1 260 2.7E-71 T 11-10-2018 IX88_16245 e8ee60cede4b41ee39df941079190400 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_16245 e8ee60cede4b41ee39df941079190400 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_16245 e8ee60cede4b41ee39df941079190400 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_13675 bac1aed58c802655ef550e6ae175086e 495 ProSitePatterns PS00217 Sugar transport proteins signature 2. 137 162 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_13675 bac1aed58c802655ef550e6ae175086e 495 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 34 427 4.8E-139 T 11-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 IX88_13675 bac1aed58c802655ef550e6ae175086e 495 Gene3D G3DSA:1.20.1250.20 24 444 2.0E-73 T 11-10-2018 IX88_13675 bac1aed58c802655ef550e6ae175086e 495 Pfam PF00083 Sugar (and other) transporter 29 442 1.1E-56 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 IX88_13675 bac1aed58c802655ef550e6ae175086e 495 SUPERFAMILY SSF103473 21 442 1.31E-73 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_13675 bac1aed58c802655ef550e6ae175086e 495 Pfam PF08946 Osmosensory transporter coiled coil 451 494 7.6E-15 T 11-10-2018 IPR015041 Osmosensory transporter coiled coil IX88_13675 bac1aed58c802655ef550e6ae175086e 495 SUPERFAMILY SSF103661 461 493 6.02E-11 T 11-10-2018 IPR036292 Proline/betaine transporter ProP, C-terminal IX88_13675 bac1aed58c802655ef550e6ae175086e 495 ProSitePatterns PS00216 Sugar transport proteins signature 1. 311 328 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_17450 326ba249d4d6344b6e7ef82e17dd931e 711 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 202 1.1E-30 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 IX88_17450 326ba249d4d6344b6e7ef82e17dd931e 711 SUPERFAMILY SSF51735 314 495 1.27E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_17450 326ba249d4d6344b6e7ef82e17dd931e 711 Gene3D G3DSA:1.10.1040.50 498 701 1.8E-57 T 11-10-2018 IX88_17450 326ba249d4d6344b6e7ef82e17dd931e 711 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 597 4.4E-16 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 IX88_17450 326ba249d4d6344b6e7ef82e17dd931e 711 SUPERFAMILY SSF48179 618 708 1.36E-17 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_17450 326ba249d4d6344b6e7ef82e17dd931e 711 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 2.3E-59 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 IX88_17450 326ba249d4d6344b6e7ef82e17dd931e 711 SUPERFAMILY SSF48179 496 634 3.06E-21 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_17450 326ba249d4d6344b6e7ef82e17dd931e 711 SUPERFAMILY SSF52096 1 295 1.24E-59 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_17450 326ba249d4d6344b6e7ef82e17dd931e 711 Gene3D G3DSA:3.40.50.720 315 497 2.3E-65 T 11-10-2018 IX88_17450 326ba249d4d6344b6e7ef82e17dd931e 711 Gene3D G3DSA:3.90.226.10 1 313 2.9E-98 T 11-10-2018 IX88_03485 47bcef29e53e2b91ef3cfdb6ba438b0e 625 Pfam PF13667 ThiC-associated domain 27 102 2.1E-33 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 IX88_03485 47bcef29e53e2b91ef3cfdb6ba438b0e 625 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 142 590 6.7E-221 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 IX88_03485 47bcef29e53e2b91ef3cfdb6ba438b0e 625 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 142 592 101.424 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 IX88_03485 47bcef29e53e2b91ef3cfdb6ba438b0e 625 Gene3D G3DSA:3.20.20.540 211 523 5.0E-157 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 IX88_03485 47bcef29e53e2b91ef3cfdb6ba438b0e 625 Pfam PF01964 Radical SAM ThiC family 143 587 3.2E-206 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 IX88_05960 b9f559dc72e40a2431cee644dde469ab 245 Pfam PF03309 Type III pantothenate kinase 4 198 3.0E-43 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 IX88_05960 b9f559dc72e40a2431cee644dde469ab 245 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 4 235 5.0E-26 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 IX88_05960 b9f559dc72e40a2431cee644dde469ab 245 Gene3D G3DSA:3.30.420.40 6 234 1.0E-47 T 11-10-2018 IX88_05960 b9f559dc72e40a2431cee644dde469ab 245 SUPERFAMILY SSF53067 4 112 7.51E-22 T 11-10-2018 IX88_05960 b9f559dc72e40a2431cee644dde469ab 245 Gene3D G3DSA:3.30.420.490 119 227 1.0E-47 T 11-10-2018 IX88_05960 b9f559dc72e40a2431cee644dde469ab 245 SUPERFAMILY SSF53067 118 241 7.12E-26 T 11-10-2018 IX88_05960 b9f559dc72e40a2431cee644dde469ab 245 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 242 19.329 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 IX88_17120 80bdd3016d34929a0daeaf55eeef0fc0 398 Pfam PF05992 SbmA/BacA-like family 84 396 1.8E-160 T 11-10-2018 IPR009248 SbmA/BacA-like GO:0015833|GO:0016021|GO:1904680 IX88_17120 80bdd3016d34929a0daeaf55eeef0fc0 398 SUPERFAMILY SSF90123 98 391 7.65E-7 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IX88_07695 c15692b638d126794d2e5ff27383fb81 256 Pfam PF12680 SnoaL-like domain 13 102 4.1E-13 T 11-10-2018 IPR037401 SnoaL-like domain IX88_07695 c15692b638d126794d2e5ff27383fb81 256 SUPERFAMILY SSF54427 5 104 4.77E-22 T 11-10-2018 IPR032710 NTF2-like domain superfamily IX88_07695 c15692b638d126794d2e5ff27383fb81 256 SUPERFAMILY SSF54427 133 240 5.06E-16 T 11-10-2018 IPR032710 NTF2-like domain superfamily IX88_07695 c15692b638d126794d2e5ff27383fb81 256 Gene3D G3DSA:3.10.450.50 1 117 4.1E-29 T 11-10-2018 IX88_07695 c15692b638d126794d2e5ff27383fb81 256 Gene3D G3DSA:3.10.450.50 129 255 7.0E-23 T 11-10-2018 IX88_01820 cc037a253b87ee0c350e2aeee97d91a5 558 Pfam PF01175 Urocanase Rossmann-like domain 142 350 8.4E-89 T 11-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 IX88_01820 cc037a253b87ee0c350e2aeee97d91a5 558 Hamap MF_00577 Urocanate hydratase [hutU]. 2 557 50.653 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 IX88_01820 cc037a253b87ee0c350e2aeee97d91a5 558 Pfam PF17391 Urocanase N-terminal domain 13 139 3.3E-62 T 11-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 IX88_01820 cc037a253b87ee0c350e2aeee97d91a5 558 PIRSF PIRSF001423 2 558 1.4E-297 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 IX88_01820 cc037a253b87ee0c350e2aeee97d91a5 558 Pfam PF17392 Urocanase C-terminal domain 353 547 4.7E-92 T 11-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 IX88_01820 cc037a253b87ee0c350e2aeee97d91a5 558 Gene3D G3DSA:3.40.50.10730 143 350 7.4E-265 T 11-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 IX88_01820 cc037a253b87ee0c350e2aeee97d91a5 558 ProSitePatterns PS01233 Urocanase signature. 443 458 - T 11-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 IX88_01820 cc037a253b87ee0c350e2aeee97d91a5 558 Gene3D G3DSA:3.40.1770.10 18 543 7.4E-265 T 11-10-2018 IX88_01820 cc037a253b87ee0c350e2aeee97d91a5 558 TIGRFAM TIGR01228 hutU: urocanate hydratase 12 555 0.0 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 IX88_01820 cc037a253b87ee0c350e2aeee97d91a5 558 SUPERFAMILY SSF111326 8 556 1.44E-264 T 11-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 IX88_02235 d7a0535e1ed29a4d4a7bba50f30fc7b7 326 Gene3D G3DSA:1.20.1510.10 20 239 1.6E-31 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily IX88_02235 d7a0535e1ed29a4d4a7bba50f30fc7b7 326 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 22 314 3.0E-66 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 IX88_02235 d7a0535e1ed29a4d4a7bba50f30fc7b7 326 SUPERFAMILY SSF161111 19 240 3.66E-48 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily IX88_02235 d7a0535e1ed29a4d4a7bba50f30fc7b7 326 Pfam PF01545 Cation efflux family 26 239 2.0E-39 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 IX88_08310 b3d659b70929a38517acfa0cdf3443ae 473 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 5 471 2.9E-178 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 IX88_08310 b3d659b70929a38517acfa0cdf3443ae 473 SUPERFAMILY SSF47323 330 471 3.4E-35 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_08310 b3d659b70929a38517acfa0cdf3443ae 473 SMART SM00840 349 411 9.0E-21 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 IX88_08310 b3d659b70929a38517acfa0cdf3443ae 473 Gene3D G3DSA:3.40.50.620 1 309 3.4E-135 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_08310 b3d659b70929a38517acfa0cdf3443ae 473 Pfam PF09190 DALR domain 349 411 7.2E-20 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 IX88_08310 b3d659b70929a38517acfa0cdf3443ae 473 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 317 1.0E-132 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 IX88_08310 b3d659b70929a38517acfa0cdf3443ae 473 SUPERFAMILY SSF52374 6 316 2.3E-97 T 11-10-2018 IX88_08310 b3d659b70929a38517acfa0cdf3443ae 473 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 472 38.506 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 IX88_08310 b3d659b70929a38517acfa0cdf3443ae 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 8.7E-31 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 IX88_08310 b3d659b70929a38517acfa0cdf3443ae 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 8.7E-31 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 IX88_08310 b3d659b70929a38517acfa0cdf3443ae 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 226 247 8.7E-31 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 IX88_08310 b3d659b70929a38517acfa0cdf3443ae 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 195 213 8.7E-31 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 IX88_08310 b3d659b70929a38517acfa0cdf3443ae 473 Gene3D G3DSA:1.20.120.640 311 472 1.8E-42 T 11-10-2018 IX88_15010 789119b949f100304374573d68bacb35 239 SUPERFAMILY SSF47413 2 65 2.38E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IX88_15010 789119b949f100304374573d68bacb35 239 Gene3D G3DSA:2.10.109.10 119 236 1.5E-11 T 11-10-2018 IX88_15010 789119b949f100304374573d68bacb35 239 Gene3D G3DSA:1.10.260.40 3 67 6.8E-8 T 11-10-2018 IX88_15010 789119b949f100304374573d68bacb35 239 Pfam PF00717 Peptidase S24-like 148 216 1.6E-9 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C IX88_15010 789119b949f100304374573d68bacb35 239 SMART SM00530 7 60 0.0066 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IX88_15010 789119b949f100304374573d68bacb35 239 SUPERFAMILY SSF51306 98 232 1.29E-20 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily IX88_01175 499805968494a84ab0194de215699b61 324 Gene3D G3DSA:1.10.10.10 19 105 2.2E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_01175 499805968494a84ab0194de215699b61 324 Pfam PF03466 LysR substrate binding domain 104 311 5.6E-31 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_01175 499805968494a84ab0194de215699b61 324 SUPERFAMILY SSF46785 20 102 4.67E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_01175 499805968494a84ab0194de215699b61 324 SUPERFAMILY SSF53850 105 316 6.7E-33 T 11-10-2018 IX88_01175 499805968494a84ab0194de215699b61 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 79 1.2E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_01175 499805968494a84ab0194de215699b61 324 Gene3D G3DSA:3.40.190.10 107 307 1.5E-43 T 11-10-2018 IX88_01175 499805968494a84ab0194de215699b61 324 Gene3D G3DSA:3.40.190.10 181 282 1.5E-43 T 11-10-2018 IX88_04430 b7c9b54540b76ed169dec20351a6ea89 372 Gene3D G3DSA:3.40.50.720 1 138 1.2E-59 T 11-10-2018 IX88_04430 b7c9b54540b76ed169dec20351a6ea89 372 SMART SM00859 2 122 1.3E-27 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 IX88_04430 b7c9b54540b76ed169dec20351a6ea89 372 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 367 9.4E-196 T 11-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 IX88_04430 b7c9b54540b76ed169dec20351a6ea89 372 SUPERFAMILY SSF55347 134 354 3.57E-76 T 11-10-2018 IX88_04430 b7c9b54540b76ed169dec20351a6ea89 372 SUPERFAMILY SSF51735 1 147 1.15E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_04430 b7c9b54540b76ed169dec20351a6ea89 372 PIRSF PIRSF000148 1 371 2.8E-66 T 11-10-2018 IX88_04430 b7c9b54540b76ed169dec20351a6ea89 372 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 33.236 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 IX88_04430 b7c9b54540b76ed169dec20351a6ea89 372 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 146 353 5.4E-56 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 IX88_04430 b7c9b54540b76ed169dec20351a6ea89 372 Gene3D G3DSA:3.30.360.10 139 350 2.4E-80 T 11-10-2018 IX88_04430 b7c9b54540b76ed169dec20351a6ea89 372 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 121 1.7E-23 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 IX88_04430 b7c9b54540b76ed169dec20351a6ea89 372 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 11-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 IX88_18135 c034c55cddf7e8715b8b55c3144f69bc 264 Gene3D G3DSA:1.10.10.60 160 264 1.2E-23 T 11-10-2018 IX88_18135 c034c55cddf7e8715b8b55c3144f69bc 264 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 256 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 IX88_18135 c034c55cddf7e8715b8b55c3144f69bc 264 SUPERFAMILY SSF46689 215 261 2.4E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_18135 c034c55cddf7e8715b8b55c3144f69bc 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 229 244 2.4E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_18135 c034c55cddf7e8715b8b55c3144f69bc 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 260 2.4E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_18135 c034c55cddf7e8715b8b55c3144f69bc 264 Gene3D G3DSA:2.60.120.10 11 98 1.3E-5 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_18135 c034c55cddf7e8715b8b55c3144f69bc 264 SMART SM00342 178 260 5.4E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_18135 c034c55cddf7e8715b8b55c3144f69bc 264 SUPERFAMILY SSF51182 16 208 1.63E-12 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_18135 c034c55cddf7e8715b8b55c3144f69bc 264 Pfam PF02311 AraC-like ligand binding domain 33 140 5.7E-8 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 IX88_18135 c034c55cddf7e8715b8b55c3144f69bc 264 Pfam PF12833 Helix-turn-helix domain 184 261 1.2E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_10115 54021775c2d257c12a9e95cff44d190a 401 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 392 1.5E-39 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_10115 54021775c2d257c12a9e95cff44d190a 401 SUPERFAMILY SSF47203 241 395 1.61E-32 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_10115 54021775c2d257c12a9e95cff44d190a 401 SUPERFAMILY SSF56645 6 254 1.96E-46 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_10115 54021775c2d257c12a9e95cff44d190a 401 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 226 1.6E-23 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_10115 54021775c2d257c12a9e95cff44d190a 401 Gene3D G3DSA:1.10.540.10 1 128 2.0E-5 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_10115 54021775c2d257c12a9e95cff44d190a 401 Gene3D G3DSA:2.40.110.10 130 247 2.2E-36 T 11-10-2018 IX88_10115 54021775c2d257c12a9e95cff44d190a 401 Gene3D G3DSA:1.20.140.10 248 398 5.6E-31 T 11-10-2018 IX88_07815 5a2f774d37585ecc252948bd0a437f1b 152 SUPERFAMILY SSF46785 15 150 3.45E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_07815 5a2f774d37585ecc252948bd0a437f1b 152 Pfam PF01047 MarR family 41 97 1.3E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IX88_07815 5a2f774d37585ecc252948bd0a437f1b 152 SMART SM00347 34 134 1.6E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IX88_07815 5a2f774d37585ecc252948bd0a437f1b 152 Gene3D G3DSA:1.10.10.10 1 152 4.3E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_07765 13959c2f4d608d5a0cede64ca8b9db04 237 Gene3D G3DSA:1.10.10.10 6 87 7.6E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_07765 13959c2f4d608d5a0cede64ca8b9db04 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 4.5E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_07765 13959c2f4d608d5a0cede64ca8b9db04 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 4.5E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_07765 13959c2f4d608d5a0cede64ca8b9db04 237 SUPERFAMILY SSF48008 96 233 2.62E-25 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_07765 13959c2f4d608d5a0cede64ca8b9db04 237 SUPERFAMILY SSF46785 6 80 3.68E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_07765 13959c2f4d608d5a0cede64ca8b9db04 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 7.6E-19 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_07765 13959c2f4d608d5a0cede64ca8b9db04 237 SMART SM00895 100 230 3.4E-20 T 11-10-2018 IPR011711 GntR, C-terminal IX88_07765 13959c2f4d608d5a0cede64ca8b9db04 237 Pfam PF07729 FCD domain 101 229 2.8E-23 T 11-10-2018 IPR011711 GntR, C-terminal IX88_07765 13959c2f4d608d5a0cede64ca8b9db04 237 Gene3D G3DSA:1.20.120.530 92 236 5.3E-27 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_07765 13959c2f4d608d5a0cede64ca8b9db04 237 SMART SM00345 17 76 1.0E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_03150 859ea7f68718f0da6fd041924ddb084d 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 60 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site IX88_03150 859ea7f68718f0da6fd041924ddb084d 198 SUPERFAMILY SSF46689 2 81 3.09E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_03150 859ea7f68718f0da6fd041924ddb084d 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.3E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_03150 859ea7f68718f0da6fd041924ddb084d 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 2.3E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_03150 859ea7f68718f0da6fd041924ddb084d 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 4.7E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_03150 859ea7f68718f0da6fd041924ddb084d 198 Gene3D G3DSA:1.10.357.10 13 198 1.4E-23 T 11-10-2018 IX88_10290 a4585760a73aae5ee09376b71563aea2 374 Pfam PF12698 ABC-2 family transporter protein 24 364 9.5E-46 T 11-10-2018 IX88_10290 a4585760a73aae5ee09376b71563aea2 374 PRINTS PR00164 ABC-2 type transport system membrane protein signature 296 315 7.5E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 IX88_10290 a4585760a73aae5ee09376b71563aea2 374 PRINTS PR00164 ABC-2 type transport system membrane protein signature 258 282 7.5E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 IX88_10290 a4585760a73aae5ee09376b71563aea2 374 PRINTS PR00164 ABC-2 type transport system membrane protein signature 316 335 7.5E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 IX88_05590 4bc0fde20a31484fd09758711d7d2acc 377 SUPERFAMILY SSF46548 18 72 1.2E-6 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 IX88_05590 4bc0fde20a31484fd09758711d7d2acc 377 TIGRFAM TIGR02484 CitB: CitB domain protein 15 375 2.3E-119 T 11-10-2018 IPR012830 Citrate utilization protein B IX88_05590 4bc0fde20a31484fd09758711d7d2acc 377 SUPERFAMILY SSF103501 158 368 2.09E-28 T 11-10-2018 IPR036197 NarG-like superfamily IX88_11735 6ba8db762c57479e084e19f384823f44 349 Gene3D G3DSA:3.40.50.720 4 335 7.1E-128 T 11-10-2018 IX88_11735 6ba8db762c57479e084e19f384823f44 349 Gene3D G3DSA:3.30.360.10 147 317 7.1E-128 T 11-10-2018 IX88_11735 6ba8db762c57479e084e19f384823f44 349 SMART SM00859 3 141 1.2E-60 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 IX88_11735 6ba8db762c57479e084e19f384823f44 349 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 166 320 6.8E-18 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 IX88_11735 6ba8db762c57479e084e19f384823f44 349 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 IX88_11735 6ba8db762c57479e084e19f384823f44 349 SUPERFAMILY SSF51735 2 164 6.86E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_11735 6ba8db762c57479e084e19f384823f44 349 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 343 42.529 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 IX88_11735 6ba8db762c57479e084e19f384823f44 349 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 141 8.2E-39 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 IX88_11735 6ba8db762c57479e084e19f384823f44 349 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 349 6.9E-129 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 IX88_11735 6ba8db762c57479e084e19f384823f44 349 SUPERFAMILY SSF55347 149 317 3.16E-46 T 11-10-2018 IX88_12245 0d20eacf06e8ec96330feace17a371da 540 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 137 415 1.2E-56 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_12245 0d20eacf06e8ec96330feace17a371da 540 Gene3D G3DSA:3.30.390.30 450 512 7.5E-7 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 IX88_12245 0d20eacf06e8ec96330feace17a371da 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 159 6.8E-11 T 11-10-2018 IX88_12245 0d20eacf06e8ec96330feace17a371da 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 367 381 6.8E-11 T 11-10-2018 IX88_12245 0d20eacf06e8ec96330feace17a371da 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 304 6.8E-11 T 11-10-2018 IX88_12245 0d20eacf06e8ec96330feace17a371da 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 413 6.8E-11 T 11-10-2018 IX88_12245 0d20eacf06e8ec96330feace17a371da 540 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 14 118 5.2E-31 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 IX88_12245 0d20eacf06e8ec96330feace17a371da 540 Gene3D G3DSA:3.50.50.60 139 422 3.2E-92 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_12245 0d20eacf06e8ec96330feace17a371da 540 SUPERFAMILY SSF51905 135 324 9.15E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_12245 0d20eacf06e8ec96330feace17a371da 540 Gene3D G3DSA:2.102.10.10 9 121 4.3E-35 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_12245 0d20eacf06e8ec96330feace17a371da 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 252 4.3E-18 T 11-10-2018 IX88_12245 0d20eacf06e8ec96330feace17a371da 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 391 413 4.3E-18 T 11-10-2018 IX88_12245 0d20eacf06e8ec96330feace17a371da 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 366 382 4.3E-18 T 11-10-2018 IX88_12245 0d20eacf06e8ec96330feace17a371da 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 157 4.3E-18 T 11-10-2018 IX88_12245 0d20eacf06e8ec96330feace17a371da 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 279 297 4.3E-18 T 11-10-2018 IX88_12245 0d20eacf06e8ec96330feace17a371da 540 SUPERFAMILY SSF51905 277 440 8.7E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_12245 0d20eacf06e8ec96330feace17a371da 540 Pfam PF13806 Rieske-like [2Fe-2S] domain 14 118 5.4E-38 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 IX88_12245 0d20eacf06e8ec96330feace17a371da 540 SUPERFAMILY SSF50022 14 123 2.62E-35 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_12245 0d20eacf06e8ec96330feace17a371da 540 Gene3D G3DSA:3.50.50.60 247 373 3.2E-92 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_16645 970da06d8febd575116db091eb21bb7c 1901 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 878 942 8.3E-4 T 11-10-2018 IPR010221 VCBS repeat IX88_16645 970da06d8febd575116db091eb21bb7c 1901 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1429 1475 0.0013 T 11-10-2018 IPR010221 VCBS repeat IX88_16645 970da06d8febd575116db091eb21bb7c 1901 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 1808 1900 2.8E-10 T 11-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass IX88_16645 970da06d8febd575116db091eb21bb7c 1901 Gene3D G3DSA:2.60.40.10 68 156 1.9E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_16645 970da06d8febd575116db091eb21bb7c 1901 Gene3D G3DSA:2.60.40.10 243 328 6.4E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_16645 970da06d8febd575116db091eb21bb7c 1901 Gene3D G3DSA:2.60.40.10 414 502 1.3E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_16645 970da06d8febd575116db091eb21bb7c 1901 Gene3D G3DSA:2.60.40.10 329 401 3.5E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_16645 970da06d8febd575116db091eb21bb7c 1901 Gene3D G3DSA:2.60.40.10 157 229 1.3E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_16645 970da06d8febd575116db091eb21bb7c 1901 Gene3D G3DSA:2.60.40.10 1 60 2.3E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_16645 970da06d8febd575116db091eb21bb7c 1901 Gene3D G3DSA:2.60.40.10 599 687 1.9E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_15495 8b7f9b085d3e92eef39af31ce5b7e55e 231 Pfam PF00440 Bacterial regulatory proteins, tetR family 42 85 1.7E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_15495 8b7f9b085d3e92eef39af31ce5b7e55e 231 Gene3D G3DSA:1.10.10.60 23 77 9.2E-17 T 11-10-2018 IX88_15495 8b7f9b085d3e92eef39af31ce5b7e55e 231 Gene3D G3DSA:1.10.357.10 78 230 6.8E-27 T 11-10-2018 IX88_15495 8b7f9b085d3e92eef39af31ce5b7e55e 231 SUPERFAMILY SSF46689 27 101 7.18E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_09015 3a80f59fd860f584184a59ae57bdec7d 286 SUPERFAMILY SSF52833 32 126 9.26E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_09015 3a80f59fd860f584184a59ae57bdec7d 286 Gene3D G3DSA:1.20.1050.10 129 245 1.1E-110 T 11-10-2018 IX88_09015 3a80f59fd860f584184a59ae57bdec7d 286 Pfam PF00043 Glutathione S-transferase, C-terminal domain 178 246 1.2E-11 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal IX88_09015 3a80f59fd860f584184a59ae57bdec7d 286 SUPERFAMILY SSF47616 113 255 1.06E-35 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IX88_09015 3a80f59fd860f584184a59ae57bdec7d 286 Pfam PF02798 Glutathione S-transferase, N-terminal domain 43 123 1.4E-7 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 IX88_09015 3a80f59fd860f584184a59ae57bdec7d 286 Gene3D G3DSA:3.40.30.10 17 251 1.1E-110 T 11-10-2018 IX88_02975 3c4ccfd74122b03acdd5855bf7522ad7 315 PIRSF PIRSF006232 19 298 1.3E-73 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 IX88_02975 3c4ccfd74122b03acdd5855bf7522ad7 315 Gene3D G3DSA:2.60.120.10 20 263 1.1E-62 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_02975 3c4ccfd74122b03acdd5855bf7522ad7 315 Pfam PF02678 Pirin 40 138 6.2E-29 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 IX88_02975 3c4ccfd74122b03acdd5855bf7522ad7 315 SUPERFAMILY SSF51182 34 297 3.88E-69 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_02975 3c4ccfd74122b03acdd5855bf7522ad7 315 Pfam PF05726 Pirin C-terminal cupin domain 190 287 1.3E-17 T 11-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 IX88_05750 da23b797a7e26549ef22447255e6a465 595 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 13 595 69.815 T 11-10-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 IX88_05750 da23b797a7e26549ef22447255e6a465 595 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 211 595 1.7E-162 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05750 da23b797a7e26549ef22447255e6a465 595 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 134 155 - T 11-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05750 da23b797a7e26549ef22447255e6a465 595 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 46 173 3.0E-41 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05750 da23b797a7e26549ef22447255e6a465 595 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 325 595 1.5E-99 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05750 da23b797a7e26549ef22447255e6a465 595 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 45 172 2.1E-40 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05750 da23b797a7e26549ef22447255e6a465 595 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 101 155 7.0E-25 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05750 da23b797a7e26549ef22447255e6a465 595 SUPERFAMILY SSF56762 221 595 1.7E-122 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05750 da23b797a7e26549ef22447255e6a465 595 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 248 259 - T 11-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05750 da23b797a7e26549ef22447255e6a465 595 Gene3D G3DSA:3.30.460.80 7 153 3.7E-35 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05750 da23b797a7e26549ef22447255e6a465 595 Gene3D G3DSA:1.10.645.20 210 595 1.2E-143 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05750 da23b797a7e26549ef22447255e6a465 595 SUPERFAMILY SSF143243 22 225 2.09E-58 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05750 da23b797a7e26549ef22447255e6a465 595 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 22 181 25.466 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05750 da23b797a7e26549ef22447255e6a465 595 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 207 595 41.148 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_15330 b6a1919209fa18370255342bede5df84 321 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 8 318 1.2E-90 T 11-10-2018 IPR016833 Putative sodium bile acid cotransporter IX88_15330 b6a1919209fa18370255342bede5df84 321 PIRSF PIRSF026166 1 321 4.5E-121 T 11-10-2018 IPR016833 Putative sodium bile acid cotransporter IX88_15330 b6a1919209fa18370255342bede5df84 321 Gene3D G3DSA:1.20.1530.20 2 320 2.1E-31 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily IX88_03060 3f81b6b773414227672dccac6b04075d 514 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 93 1.2E-13 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IX88_03060 3f81b6b773414227672dccac6b04075d 514 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 367 376 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IX88_03060 3f81b6b773414227672dccac6b04075d 514 SUPERFAMILY SSF47917 384 512 7.85E-46 T 11-10-2018 IX88_03060 3f81b6b773414227672dccac6b04075d 514 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 513 49.709 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03060 3f81b6b773414227672dccac6b04075d 514 SUPERFAMILY SSF50615 11 95 3.4E-27 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IX88_03060 3f81b6b773414227672dccac6b04075d 514 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 383 508 2.4E-44 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03060 3f81b6b773414227672dccac6b04075d 514 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 376 5.1E-74 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IX88_03060 3f81b6b773414227672dccac6b04075d 514 SUPERFAMILY SSF52540 97 382 1.76E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_03060 3f81b6b773414227672dccac6b04075d 514 Gene3D G3DSA:1.20.150.20 384 514 3.3E-46 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03060 3f81b6b773414227672dccac6b04075d 514 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 512 7.7E-249 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03060 3f81b6b773414227672dccac6b04075d 514 Gene3D G3DSA:3.40.50.300 95 383 2.5E-129 T 11-10-2018 IX88_03060 3f81b6b773414227672dccac6b04075d 514 Gene3D G3DSA:2.40.30.20 2 94 6.2E-31 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IX88_10510 0135150d04d25ec341bb60c3bb95f297 334 Gene3D G3DSA:3.30.360.10 149 311 3.1E-76 T 11-10-2018 IX88_10510 0135150d04d25ec341bb60c3bb95f297 334 Pfam PF00742 Homoserine dehydrogenase 149 325 1.7E-42 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 IX88_10510 0135150d04d25ec341bb60c3bb95f297 334 SUPERFAMILY SSF55347 149 310 2.35E-35 T 11-10-2018 IX88_10510 0135150d04d25ec341bb60c3bb95f297 334 SUPERFAMILY SSF51735 1 170 1.98E-17 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_10510 0135150d04d25ec341bb60c3bb95f297 334 PIRSF PIRSF036497 1 333 2.4E-71 T 11-10-2018 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 IX88_10510 0135150d04d25ec341bb60c3bb95f297 334 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 140 5.5E-11 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 IX88_10510 0135150d04d25ec341bb60c3bb95f297 334 Gene3D G3DSA:3.40.50.720 6 319 3.1E-76 T 11-10-2018 IX88_02670 768d596cdb76a8586275bf6cd729c537 383 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 74.465 T 11-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 IX88_02670 768d596cdb76a8586275bf6cd729c537 383 Pfam PF01070 FMN-dependent dehydrogenase 13 375 3.0E-125 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 IX88_02670 768d596cdb76a8586275bf6cd729c537 383 Gene3D G3DSA:3.20.20.70 3 381 1.6E-125 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_02670 768d596cdb76a8586275bf6cd729c537 383 PIRSF PIRSF000138 2 380 1.5E-121 T 11-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 IX88_02670 768d596cdb76a8586275bf6cd729c537 383 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 11-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 IX88_02670 768d596cdb76a8586275bf6cd729c537 383 SUPERFAMILY SSF51395 5 376 2.2E-99 T 11-10-2018 IX88_04360 f6ec79e929e2466ea4119445c3c6f36a 286 Gene3D G3DSA:1.10.10.10 1 91 1.7E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_04360 f6ec79e929e2466ea4119445c3c6f36a 286 Pfam PF03466 LysR substrate binding domain 88 286 2.8E-42 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_04360 f6ec79e929e2466ea4119445c3c6f36a 286 Gene3D G3DSA:3.40.190.290 92 286 1.7E-41 T 11-10-2018 IX88_04360 f6ec79e929e2466ea4119445c3c6f36a 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_04360 f6ec79e929e2466ea4119445c3c6f36a 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_04360 f6ec79e929e2466ea4119445c3c6f36a 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_04360 f6ec79e929e2466ea4119445c3c6f36a 286 SUPERFAMILY SSF53850 88 286 3.14E-41 T 11-10-2018 IX88_04360 f6ec79e929e2466ea4119445c3c6f36a 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 4.4E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_04360 f6ec79e929e2466ea4119445c3c6f36a 286 SUPERFAMILY SSF46785 1 110 4.54E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_14385 6d69c529336363fe98330041953365b2 292 Pfam PF00756 Putative esterase 25 205 5.3E-24 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 IX88_14385 6d69c529336363fe98330041953365b2 292 SUPERFAMILY SSF53474 15 270 8.11E-57 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_14385 6d69c529336363fe98330041953365b2 292 Gene3D G3DSA:3.40.50.1820 9 284 5.3E-71 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_01975 a0a38da66c3c66024982c5645f76a185 342 Gene3D G3DSA:3.90.180.10 15 336 1.9E-111 T 11-10-2018 IX88_01975 a0a38da66c3c66024982c5645f76a185 342 SMART SM00829 15 336 3.0E-8 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 IX88_01975 a0a38da66c3c66024982c5645f76a185 342 SUPERFAMILY SSF50129 8 164 3.2E-42 T 11-10-2018 IPR011032 GroES-like superfamily IX88_01975 a0a38da66c3c66024982c5645f76a185 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 IX88_01975 a0a38da66c3c66024982c5645f76a185 342 Pfam PF00107 Zinc-binding dehydrogenase 180 302 5.2E-22 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 IX88_01975 a0a38da66c3c66024982c5645f76a185 342 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 173 200 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 IX88_01975 a0a38da66c3c66024982c5645f76a185 342 Gene3D G3DSA:3.40.50.720 154 308 1.9E-111 T 11-10-2018 IX88_01975 a0a38da66c3c66024982c5645f76a185 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 137 1.1E-24 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 IX88_01975 a0a38da66c3c66024982c5645f76a185 342 SUPERFAMILY SSF51735 143 306 2.69E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_09395 5c0d6afa64479f8d4f6a72b9ee22c2b4 407 SUPERFAMILY SSF56645 30 232 1.83E-40 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_09395 5c0d6afa64479f8d4f6a72b9ee22c2b4 407 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 31 130 1.1E-10 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_09395 5c0d6afa64479f8d4f6a72b9ee22c2b4 407 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 250 384 1.8E-18 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain IX88_09395 5c0d6afa64479f8d4f6a72b9ee22c2b4 407 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 18 406 6.6E-181 T 11-10-2018 IPR023922 Sulphate-starvation-induced SfnB IX88_09395 5c0d6afa64479f8d4f6a72b9ee22c2b4 407 Gene3D G3DSA:1.10.540.10 25 132 4.1E-24 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_09395 5c0d6afa64479f8d4f6a72b9ee22c2b4 407 Gene3D G3DSA:2.40.110.10 133 233 1.4E-26 T 11-10-2018 IX88_09395 5c0d6afa64479f8d4f6a72b9ee22c2b4 407 SUPERFAMILY SSF47203 238 402 2.26E-18 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_09395 5c0d6afa64479f8d4f6a72b9ee22c2b4 407 Gene3D G3DSA:1.20.140.10 234 404 1.4E-46 T 11-10-2018 IX88_09395 5c0d6afa64479f8d4f6a72b9ee22c2b4 407 PIRSF PIRSF016578 6 397 3.5E-37 T 11-10-2018 IX88_17360 d99830f6be5669481e5a5fda02073e31 611 Pfam PF03144 Elongation factor Tu domain 2 227 297 2.6E-8 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 IX88_17360 d99830f6be5669481e5a5fda02073e31 611 SUPERFAMILY SSF54980 406 521 2.69E-28 T 11-10-2018 IPR035647 EF-G domain III/V-like IX88_17360 d99830f6be5669481e5a5fda02073e31 611 Pfam PF00009 Elongation factor Tu GTP binding domain 5 202 2.6E-51 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_17360 d99830f6be5669481e5a5fda02073e31 611 Gene3D G3DSA:3.30.70.240 397 490 1.3E-133 T 11-10-2018 IX88_17360 d99830f6be5669481e5a5fda02073e31 611 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 147 2.7E-23 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IX88_17360 d99830f6be5669481e5a5fda02073e31 611 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 607 1.9E-285 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 IX88_17360 d99830f6be5669481e5a5fda02073e31 611 Gene3D G3DSA:2.40.30.10 207 307 2.6E-35 T 11-10-2018 IX88_17360 d99830f6be5669481e5a5fda02073e31 611 Pfam PF00679 Elongation factor G C-terminus 405 485 2.2E-23 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like IX88_17360 d99830f6be5669481e5a5fda02073e31 611 SMART SM00838 406 491 0.003 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like IX88_17360 d99830f6be5669481e5a5fda02073e31 611 SUPERFAMILY SSF54980 310 395 1.83E-15 T 11-10-2018 IPR035647 EF-G domain III/V-like IX88_17360 d99830f6be5669481e5a5fda02073e31 611 Gene3D G3DSA:3.40.50.300 3 206 2.0E-62 T 11-10-2018 IX88_17360 d99830f6be5669481e5a5fda02073e31 611 SUPERFAMILY SSF52540 4 227 7.02E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_17360 d99830f6be5669481e5a5fda02073e31 611 Gene3D G3DSA:2.40.50.250 491 607 1.3E-133 T 11-10-2018 IX88_17360 d99830f6be5669481e5a5fda02073e31 611 SUPERFAMILY SSF50447 159 307 8.94E-33 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IX88_17360 d99830f6be5669481e5a5fda02073e31 611 Gene3D G3DSA:3.30.70.870 314 598 1.3E-133 T 11-10-2018 IX88_17360 d99830f6be5669481e5a5fda02073e31 611 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_17360 d99830f6be5669481e5a5fda02073e31 611 PRINTS PR00315 GTP-binding elongation factor signature 53 61 1.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_17360 d99830f6be5669481e5a5fda02073e31 611 PRINTS PR00315 GTP-binding elongation factor signature 79 89 1.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_17360 d99830f6be5669481e5a5fda02073e31 611 PRINTS PR00315 GTP-binding elongation factor signature 95 106 1.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_17360 d99830f6be5669481e5a5fda02073e31 611 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 SUPERFAMILY SSF141868 698 945 9.29E-85 T 11-10-2018 IPR035919 EAL domain superfamily IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 524 682 1.3E-22 T 11-10-2018 IPR000160 GGDEF domain IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 SMART SM00091 396 464 0.002 T 11-10-2018 IPR000014 PAS domain IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 SMART SM00267 512 684 3.0E-31 T 11-10-2018 IPR000160 GGDEF domain IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 Pfam PF00990 Diguanylate cyclase, GGDEF domain 524 679 7.3E-31 T 11-10-2018 IPR000160 GGDEF domain IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 Pfam PF00989 PAS fold 401 508 3.1E-9 T 11-10-2018 IPR013767 PAS fold GO:0006355 IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 Gene3D G3DSA:3.20.20.450 697 947 2.9E-95 T 11-10-2018 IPR035919 EAL domain superfamily IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 Gene3D G3DSA:3.30.450.20 393 514 1.1E-19 T 11-10-2018 IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 401 519 1.8E-14 T 11-10-2018 IPR000014 PAS domain IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 314 395 1.2E-7 T 11-10-2018 IPR000014 PAS domain IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 SUPERFAMILY SSF55785 314 390 8.55E-12 T 11-10-2018 IPR035965 PAS domain superfamily IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 Gene3D G3DSA:3.30.450.20 284 392 5.2E-18 T 11-10-2018 IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 SMART SM00086 344 388 1.5E-5 T 11-10-2018 IPR001610 PAC motif IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 SMART SM00086 470 512 0.045 T 11-10-2018 IPR001610 PAC motif IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 SMART SM00052 693 938 2.0E-102 T 11-10-2018 IPR001633 EAL domain IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 SUPERFAMILY SSF55785 407 519 9.07E-15 T 11-10-2018 IPR035965 PAS domain superfamily IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 SUPERFAMILY SSF55073 528 684 2.9E-33 T 11-10-2018 IPR029787 Nucleotide cyclase IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 Gene3D G3DSA:3.30.70.270 517 696 1.3E-38 T 11-10-2018 IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 Pfam PF08447 PAS fold 313 380 8.7E-14 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 IX88_14680 1fb4cdbac0ba0b298c4ef379eb7a3676 949 Pfam PF00563 EAL domain 699 933 1.4E-72 T 11-10-2018 IPR001633 EAL domain IX88_14595 c01f53e641316bbad6205647b9c982b8 274 SUPERFAMILY SSF51215 26 152 3.27E-20 T 11-10-2018 IPR037923 Transcription regulator HTH-like IX88_14595 c01f53e641316bbad6205647b9c982b8 274 Gene3D G3DSA:1.10.10.60 168 229 5.8E-18 T 11-10-2018 IX88_14595 c01f53e641316bbad6205647b9c982b8 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 265 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 IX88_14595 c01f53e641316bbad6205647b9c982b8 274 Pfam PF12833 Helix-turn-helix domain 193 269 9.3E-24 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_14595 c01f53e641316bbad6205647b9c982b8 274 SUPERFAMILY SSF46689 172 221 9.41E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_14595 c01f53e641316bbad6205647b9c982b8 274 SUPERFAMILY SSF46689 224 270 6.42E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_14595 c01f53e641316bbad6205647b9c982b8 274 Gene3D G3DSA:1.10.10.60 230 273 1.1E-14 T 11-10-2018 IX88_14595 c01f53e641316bbad6205647b9c982b8 274 SMART SM00342 187 269 5.5E-31 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_14595 c01f53e641316bbad6205647b9c982b8 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 253 1.4E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_14595 c01f53e641316bbad6205647b9c982b8 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 253 269 1.4E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_14595 c01f53e641316bbad6205647b9c982b8 274 Pfam PF02311 AraC-like ligand binding domain 15 142 1.0E-22 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 IX88_00630 b6d071eb737a56f888b6715b22e46c07 92 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 17.307 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_00630 b6d071eb737a56f888b6715b22e46c07 92 Pfam PF01192 RNA polymerase Rpb6 8 59 4.8E-17 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 IX88_00630 b6d071eb737a56f888b6715b22e46c07 92 Gene3D G3DSA:3.90.940.10 1 84 1.8E-27 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 IX88_00630 b6d071eb737a56f888b6715b22e46c07 92 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 7.7E-22 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_00630 b6d071eb737a56f888b6715b22e46c07 92 SUPERFAMILY SSF63562 1 70 1.34E-25 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 IX88_00630 b6d071eb737a56f888b6715b22e46c07 92 SMART SM01409 8 61 4.3E-17 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 IX88_08980 d9ee982e6223e1ca7e24db9be71ea11a 212 PIRSF PIRSF006324 5 209 8.0E-46 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_08980 d9ee982e6223e1ca7e24db9be71ea11a 212 Pfam PF01810 LysE type translocator 19 207 7.7E-33 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_07985 e404aa5d759efd66fec9af4c5973cc03 349 PRINTS PR00069 Aldo-keto reductase signature 167 184 1.3E-7 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 IX88_07985 e404aa5d759efd66fec9af4c5973cc03 349 PRINTS PR00069 Aldo-keto reductase signature 116 134 1.3E-7 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 IX88_07985 e404aa5d759efd66fec9af4c5973cc03 349 Pfam PF00248 Aldo/keto reductase family 15 340 1.4E-69 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain IX88_07985 e404aa5d759efd66fec9af4c5973cc03 349 Gene3D G3DSA:3.20.20.100 1 349 1.9E-124 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily IX88_07985 e404aa5d759efd66fec9af4c5973cc03 349 SUPERFAMILY SSF51430 1 347 7.07E-106 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily IX88_17325 8c853946d4bf60aefe2f5e8c3f6c9af8 369 Gene3D G3DSA:3.20.20.70 1 358 1.6E-118 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_17325 8c853946d4bf60aefe2f5e8c3f6c9af8 369 SUPERFAMILY SSF51395 1 360 5.8E-110 T 11-10-2018 IX88_17325 8c853946d4bf60aefe2f5e8c3f6c9af8 369 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 340 5.0E-72 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 IX88_10100 2c4a8badf9eec8659f98414733d093d6 621 Gene3D G3DSA:1.10.4030.30 37 194 3.7E-12 T 11-10-2018 IX88_10100 2c4a8badf9eec8659f98414733d093d6 621 SUPERFAMILY SSF54534 262 358 1.24E-23 T 11-10-2018 IX88_10100 2c4a8badf9eec8659f98414733d093d6 621 Pfam PF13624 SurA N-terminal domain 1 158 8.0E-36 T 11-10-2018 IX88_10100 2c4a8badf9eec8659f98414733d093d6 621 Pfam PF13616 PPIC-type PPIASE domain 253 362 4.8E-28 T 11-10-2018 IX88_10100 2c4a8badf9eec8659f98414733d093d6 621 SUPERFAMILY SSF109998 40 290 3.73E-23 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily IX88_10100 2c4a8badf9eec8659f98414733d093d6 621 Gene3D G3DSA:3.10.50.40 265 360 1.4E-25 T 11-10-2018 IX88_10845 bb614424c92e3b9beedeeb908001c27f 244 PRINTS PR00969 Pili chaperone signature 106 123 3.2E-31 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 IX88_10845 bb614424c92e3b9beedeeb908001c27f 244 PRINTS PR00969 Pili chaperone signature 136 151 3.2E-31 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 IX88_10845 bb614424c92e3b9beedeeb908001c27f 244 PRINTS PR00969 Pili chaperone signature 27 36 3.2E-31 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 IX88_10845 bb614424c92e3b9beedeeb908001c27f 244 PRINTS PR00969 Pili chaperone signature 76 97 3.2E-31 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 IX88_10845 bb614424c92e3b9beedeeb908001c27f 244 PRINTS PR00969 Pili chaperone signature 171 186 3.2E-31 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 IX88_10845 bb614424c92e3b9beedeeb908001c27f 244 SUPERFAMILY SSF49584 156 243 6.67E-21 T 11-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily IX88_10845 bb614424c92e3b9beedeeb908001c27f 244 Gene3D G3DSA:2.60.40.10 157 240 7.3E-19 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_10845 bb614424c92e3b9beedeeb908001c27f 244 SUPERFAMILY SSF49354 22 154 4.71E-39 T 11-10-2018 IPR008962 PapD-like superfamily IX88_10845 bb614424c92e3b9beedeeb908001c27f 244 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 154 5.5E-42 T 11-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 IX88_10845 bb614424c92e3b9beedeeb908001c27f 244 Gene3D G3DSA:2.60.40.10 28 155 7.2E-39 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_10845 bb614424c92e3b9beedeeb908001c27f 244 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 237 5.9E-14 T 11-10-2018 IPR016148 Pili assembly chaperone, C-terminal IX88_00970 16339534669f0073e8a08271f6286b8a 563 SUPERFAMILY SSF90123 26 329 1.02E-35 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IX88_00970 16339534669f0073e8a08271f6286b8a 563 SUPERFAMILY SSF52540 350 559 2.62E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_00970 16339534669f0073e8a08271f6286b8a 563 Pfam PF00664 ABC transporter transmembrane region 31 311 2.4E-15 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 IX88_00970 16339534669f0073e8a08271f6286b8a 563 SMART SM00382 377 562 7.4E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_00970 16339534669f0073e8a08271f6286b8a 563 Gene3D G3DSA:1.20.1560.10 8 340 5.0E-34 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IX88_00970 16339534669f0073e8a08271f6286b8a 563 Pfam PF00005 ABC transporter 369 518 1.2E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_00970 16339534669f0073e8a08271f6286b8a 563 ProSitePatterns PS00211 ABC transporters family signature. 490 504 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_00970 16339534669f0073e8a08271f6286b8a 563 Gene3D G3DSA:3.40.50.300 341 561 5.2E-49 T 11-10-2018 IX88_13510 af46dfcddd35338f790c20a779d3e04d 243 SUPERFAMILY SSF56281 4 243 1.97E-66 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_13510 af46dfcddd35338f790c20a779d3e04d 243 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 174 243 9.0E-22 T 11-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 IX88_13510 af46dfcddd35338f790c20a779d3e04d 243 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 5 243 40.766 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 IX88_13510 af46dfcddd35338f790c20a779d3e04d 243 PIRSF PIRSF005457 1 243 4.0E-96 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 IX88_13510 af46dfcddd35338f790c20a779d3e04d 243 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 10 237 3.8E-96 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 IX88_13510 af46dfcddd35338f790c20a779d3e04d 243 SMART SM00849 15 173 2.0E-33 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_13510 af46dfcddd35338f790c20a779d3e04d 243 Pfam PF00753 Metallo-beta-lactamase superfamily 47 173 2.8E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_13510 af46dfcddd35338f790c20a779d3e04d 243 Gene3D G3DSA:3.60.15.10 5 243 7.8E-82 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_15125 05b9448640ac9e729835e1c8bddc59fb 184 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 3 180 9.5E-72 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 IX88_15125 05b9448640ac9e729835e1c8bddc59fb 184 Pfam PF01227 GTP cyclohydrolase I 4 180 1.2E-72 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 IX88_15125 05b9448640ac9e729835e1c8bddc59fb 184 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 181 35.201 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 IX88_15125 05b9448640ac9e729835e1c8bddc59fb 184 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 108 118 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 IX88_15125 05b9448640ac9e729835e1c8bddc59fb 184 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 60 76 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 IX88_15125 05b9448640ac9e729835e1c8bddc59fb 184 Gene3D G3DSA:1.10.286.10 1 49 6.2E-17 T 11-10-2018 IX88_15125 05b9448640ac9e729835e1c8bddc59fb 184 Gene3D G3DSA:3.30.1130.10 51 183 3.8E-59 T 11-10-2018 IX88_15125 05b9448640ac9e729835e1c8bddc59fb 184 SUPERFAMILY SSF55620 2 181 1.56E-73 T 11-10-2018 IX88_10275 c8e21adb0eff10f43acbbaa118ceaf96 215 SUPERFAMILY SSF48498 82 209 1.29E-15 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_10275 c8e21adb0eff10f43acbbaa118ceaf96 215 Gene3D G3DSA:1.10.357.10 5 215 2.8E-25 T 11-10-2018 IX88_10275 c8e21adb0eff10f43acbbaa118ceaf96 215 SUPERFAMILY SSF46689 2 74 2.82E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_10275 c8e21adb0eff10f43acbbaa118ceaf96 215 Pfam PF09209 Domain of unknown function (DUF1956) 86 205 4.5E-14 T 11-10-2018 IPR015292 Transcription regulator YbiH, C-terminal IX88_10275 c8e21adb0eff10f43acbbaa118ceaf96 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.2E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_10275 c8e21adb0eff10f43acbbaa118ceaf96 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.8E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_10275 c8e21adb0eff10f43acbbaa118ceaf96 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 6.8E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_16275 ea25d358054d69a1de967ac149cd7b16 253 Gene3D G3DSA:3.30.420.10 85 237 2.2E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IX88_16275 ea25d358054d69a1de967ac149cd7b16 253 Pfam PF00665 Integrase core domain 90 205 2.4E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 IX88_16275 ea25d358054d69a1de967ac149cd7b16 253 Pfam PF13276 HTH-like domain 12 63 2.1E-19 T 11-10-2018 IPR025948 HTH-like domain IX88_16275 ea25d358054d69a1de967ac149cd7b16 253 SUPERFAMILY SSF53098 85 244 3.34E-33 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_12945 ea25d358054d69a1de967ac149cd7b16 253 Gene3D G3DSA:3.30.420.10 85 237 2.2E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IX88_12945 ea25d358054d69a1de967ac149cd7b16 253 Pfam PF00665 Integrase core domain 90 205 2.4E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 IX88_12945 ea25d358054d69a1de967ac149cd7b16 253 Pfam PF13276 HTH-like domain 12 63 2.1E-19 T 11-10-2018 IPR025948 HTH-like domain IX88_12945 ea25d358054d69a1de967ac149cd7b16 253 SUPERFAMILY SSF53098 85 244 3.34E-33 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_15305 cf6dba490be882d016bb9b6ff5ef8a17 189 SUPERFAMILY SSF50104 2 63 4.31E-21 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily IX88_15305 cf6dba490be882d016bb9b6ff5ef8a17 189 PIRSF PIRSF005901 2 189 1.6E-64 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP IX88_15305 cf6dba490be882d016bb9b6ff5ef8a17 189 SUPERFAMILY SSF50249 132 189 2.74E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_15305 cf6dba490be882d016bb9b6ff5ef8a17 189 Gene3D G3DSA:2.40.50.140 66 131 2.9E-30 T 11-10-2018 IX88_15305 cf6dba490be882d016bb9b6ff5ef8a17 189 SUPERFAMILY SSF50249 69 130 9.42E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_15305 cf6dba490be882d016bb9b6ff5ef8a17 189 Gene3D G3DSA:2.30.30.30 1 65 2.6E-29 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 IX88_15305 cf6dba490be882d016bb9b6ff5ef8a17 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 125 9.3E-23 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 IX88_15305 cf6dba490be882d016bb9b6ff5ef8a17 189 Pfam PF09285 Elongation factor P, C-terminal 133 188 4.8E-25 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 IX88_15305 cf6dba490be882d016bb9b6ff5ef8a17 189 Hamap MF_00141 Elongation factor P [efp]. 3 189 49.141 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 IX88_15305 cf6dba490be882d016bb9b6ff5ef8a17 189 TIGRFAM TIGR00038 efp: translation elongation factor P 4 189 1.3E-77 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 IX88_15305 cf6dba490be882d016bb9b6ff5ef8a17 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 5.8E-26 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like IX88_15305 cf6dba490be882d016bb9b6ff5ef8a17 189 SMART SM01185 69 125 3.7E-27 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 IX88_15305 cf6dba490be882d016bb9b6ff5ef8a17 189 SMART SM00841 133 188 1.9E-31 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 IX88_15305 cf6dba490be882d016bb9b6ff5ef8a17 189 Gene3D G3DSA:2.40.50.140 132 189 1.4E-27 T 11-10-2018 IX88_13695 10a8d60b02521d57bad8450277e84ea7 273 Gene3D G3DSA:2.60.40.10 37 157 7.3E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_13695 10a8d60b02521d57bad8450277e84ea7 273 SUPERFAMILY SSF49354 28 157 2.41E-25 T 11-10-2018 IPR008962 PapD-like superfamily IX88_13695 10a8d60b02521d57bad8450277e84ea7 273 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 43 153 3.3E-20 T 11-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 SUPERFAMILY SSF82714 182 272 1.96E-23 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 SUPERFAMILY SSF82866 296 497 2.22E-46 T 11-10-2018 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 SUPERFAMILY SSF82693 38 131 9.59E-29 T 11-10-2018 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 SUPERFAMILY SSF82866 810 1042 5.89E-43 T 11-10-2018 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 Gene3D G3DSA:3.30.2090.10 725 813 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 SUPERFAMILY SSF82693 569 665 3.19E-23 T 11-10-2018 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 SUPERFAMILY SSF82714 726 813 6.15E-23 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1053 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 SUPERFAMILY SSF82693 135 330 4.71E-25 T 11-10-2018 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 Gene3D G3DSA:3.30.70.1440 673 873 0.0 T 11-10-2018 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.1E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.1E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.1E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 556 573 2.1E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.1E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.1E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.1E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 624 638 2.1E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.1E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 Gene3D G3DSA:1.20.1640.10 8 516 0.0 T 11-10-2018 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 Gene3D G3DSA:1.20.1640.10 517 1037 0.0 T 11-10-2018 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 Gene3D G3DSA:3.30.70.1430 38 821 0.0 T 11-10-2018 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 11-10-2018 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 Gene3D G3DSA:3.30.70.1430 571 672 0.0 T 11-10-2018 IX88_16850 6844f19bcf46d7b2487fb3909833594a 1058 Pfam PF00873 AcrB/AcrD/AcrF family 1 1040 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_08110 80db3f2719d1a09e376812016f459420 368 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 275 364 1.1E-20 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 IX88_08110 80db3f2719d1a09e376812016f459420 368 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 146 162 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site IX88_08110 80db3f2719d1a09e376812016f459420 368 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 149 226 1.0E-19 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 IX88_08110 80db3f2719d1a09e376812016f459420 368 Gene3D G3DSA:3.40.47.10 2 211 4.9E-55 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_08110 80db3f2719d1a09e376812016f459420 368 SUPERFAMILY SSF53901 2 364 1.27E-49 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_08110 80db3f2719d1a09e376812016f459420 368 Gene3D G3DSA:3.40.47.10 213 366 8.6E-38 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_03530 c73d05a7209d0eac7abe150d832890b0 246 SMART SM00448 1 111 4.8E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_03530 c73d05a7209d0eac7abe150d832890b0 246 SMART SM00850 147 244 1.5E-27 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 IX88_03530 c73d05a7209d0eac7abe150d832890b0 246 Gene3D G3DSA:3.40.50.2300 1 124 2.1E-39 T 11-10-2018 IX88_03530 c73d05a7209d0eac7abe150d832890b0 246 Gene3D G3DSA:2.40.50.40 138 206 3.5E-11 T 11-10-2018 IX88_03530 c73d05a7209d0eac7abe150d832890b0 246 SUPERFAMILY SSF52172 1 167 5.83E-37 T 11-10-2018 IPR011006 CheY-like superfamily IX88_03530 c73d05a7209d0eac7abe150d832890b0 246 Pfam PF00072 Response regulator receiver domain 3 110 9.8E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_03530 c73d05a7209d0eac7abe150d832890b0 246 Pfam PF04397 LytTr DNA-binding domain 150 243 2.5E-23 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 IX88_08350 279cb32be8c45543e4a76acfb587a317 396 Gene3D G3DSA:2.40.50.100 246 282 1.4E-17 T 11-10-2018 IX88_08350 279cb32be8c45543e4a76acfb587a317 396 Gene3D G3DSA:2.40.50.100 62 95 6.1E-11 T 11-10-2018 IX88_08350 279cb32be8c45543e4a76acfb587a317 396 SUPERFAMILY SSF111369 71 207 6.15E-8 T 11-10-2018 IX88_08350 279cb32be8c45543e4a76acfb587a317 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 258 279 9.6E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 IX88_08350 279cb32be8c45543e4a76acfb587a317 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 376 396 9.6E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 IX88_08350 279cb32be8c45543e4a76acfb587a317 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 315 338 9.6E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 IX88_08350 279cb32be8c45543e4a76acfb587a317 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 291 315 9.6E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 IX88_08350 279cb32be8c45543e4a76acfb587a317 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 32 55 9.6E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 IX88_08350 279cb32be8c45543e4a76acfb587a317 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 74 94 9.6E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 IX88_08350 279cb32be8c45543e4a76acfb587a317 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 361 376 9.6E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 IX88_08350 279cb32be8c45543e4a76acfb587a317 396 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 187 396 1.9E-62 T 11-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 IX88_08350 279cb32be8c45543e4a76acfb587a317 396 ProSitePatterns PS00543 HlyD family secretion proteins signature. 361 383 - T 11-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 IX88_08350 279cb32be8c45543e4a76acfb587a317 396 Pfam PF13437 HlyD family secretion protein 246 354 1.2E-17 T 11-10-2018 IX88_08350 279cb32be8c45543e4a76acfb587a317 396 Gene3D G3DSA:2.40.30.170 50 60 6.1E-11 T 11-10-2018 IX88_08350 279cb32be8c45543e4a76acfb587a317 396 Gene3D G3DSA:2.40.30.170 283 374 1.4E-17 T 11-10-2018 IX88_08350 279cb32be8c45543e4a76acfb587a317 396 Pfam PF13533 Biotin-lipoyl like 68 100 5.5E-9 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain IX88_08350 279cb32be8c45543e4a76acfb587a317 396 Gene3D G3DSA:1.10.287.470 149 245 1.4E-17 T 11-10-2018 IX88_08350 279cb32be8c45543e4a76acfb587a317 396 Gene3D G3DSA:1.10.287.470 96 124 6.1E-11 T 11-10-2018 IX88_00665 04d70a25b88d5f366160654ec07d6ab5 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 8.0E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_00665 04d70a25b88d5f366160654ec07d6ab5 145 SUPERFAMILY SSF54523 7 143 3.03E-22 T 11-10-2018 IX88_00665 04d70a25b88d5f366160654ec07d6ab5 145 Pfam PF00114 Pilin (bacterial filament) 35 143 6.1E-15 T 11-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 IX88_00665 04d70a25b88d5f366160654ec07d6ab5 145 Gene3D G3DSA:3.30.700.10 7 145 2.4E-32 T 11-10-2018 IX88_00665 04d70a25b88d5f366160654ec07d6ab5 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_00665 04d70a25b88d5f366160654ec07d6ab5 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.0E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_05130 a6b38ffabef4894c1e9f8369f673f4a3 269 Gene3D G3DSA:3.20.20.60 1 269 1.4E-97 T 11-10-2018 IX88_05130 a6b38ffabef4894c1e9f8369f673f4a3 269 SUPERFAMILY SSF51621 2 265 1.22E-94 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 IX88_05130 a6b38ffabef4894c1e9f8369f673f4a3 269 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 265 39.41 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 IX88_05130 a6b38ffabef4894c1e9f8369f673f4a3 269 PIRSF PIRSF000388 1 268 6.8E-92 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 IX88_05130 a6b38ffabef4894c1e9f8369f673f4a3 269 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 260 4.3E-99 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 IX88_05130 a6b38ffabef4894c1e9f8369f673f4a3 269 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 7 266 4.0E-96 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 IX88_01195 e7d3945b7c8342d82958404f4ef90c59 480 Pfam PF00324 Amino acid permease 24 433 2.3E-104 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 IX88_01195 e7d3945b7c8342d82958404f4ef90c59 480 ProSitePatterns PS00218 Amino acid permeases signature. 49 79 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 IX88_01195 e7d3945b7c8342d82958404f4ef90c59 480 Gene3D G3DSA:1.20.1740.10 16 469 1.1E-61 T 11-10-2018 IX88_01195 e7d3945b7c8342d82958404f4ef90c59 480 PIRSF PIRSF006060 2 479 5.4E-71 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 PIRSF PIRSF002111 1 534 1.5E-212 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 SUPERFAMILY SSF50249 189 277 2.69E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 Gene3D G3DSA:2.40.50.140 187 268 2.0E-29 T 11-10-2018 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 SUPERFAMILY SSF50249 342 440 8.58E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 SUPERFAMILY SSF50249 255 363 3.58E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 Gene3D G3DSA:2.40.50.140 358 444 3.1E-25 T 11-10-2018 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 Gene3D G3DSA:2.40.50.140 269 357 1.5E-28 T 11-10-2018 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.6E-210 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 Pfam PF00575 S1 RNA binding domain 189 260 2.4E-22 T 11-10-2018 IPR003029 S1 domain GO:0003676 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 Pfam PF00575 S1 RNA binding domain 102 171 4.6E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 Pfam PF00575 S1 RNA binding domain 18 86 3.6E-8 T 11-10-2018 IPR003029 S1 domain GO:0003676 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 Pfam PF00575 S1 RNA binding domain 361 434 2.5E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 Pfam PF00575 S1 RNA binding domain 275 347 2.6E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 Pfam PF00575 S1 RNA binding domain 450 520 1.9E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 SMART SM00316 449 520 6.7E-20 T 11-10-2018 IPR022967 RNA-binding domain, S1 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 SMART SM00316 190 260 5.8E-30 T 11-10-2018 IPR022967 RNA-binding domain, S1 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 SMART SM00316 19 87 3.8E-8 T 11-10-2018 IPR022967 RNA-binding domain, S1 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 SMART SM00316 275 347 1.9E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 SMART SM00316 103 171 3.8E-11 T 11-10-2018 IPR022967 RNA-binding domain, S1 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 SMART SM00316 362 434 8.0E-22 T 11-10-2018 IPR022967 RNA-binding domain, S1 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 SUPERFAMILY SSF50249 103 184 8.58E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 Gene3D G3DSA:2.40.50.140 100 183 6.2E-9 T 11-10-2018 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 Gene3D G3DSA:2.40.50.140 5 99 3.6E-17 T 11-10-2018 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 Gene3D G3DSA:2.40.50.140 445 528 4.4E-20 T 11-10-2018 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.6E-86 T 11-10-2018 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.6E-86 T 11-10-2018 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.6E-86 T 11-10-2018 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.6E-86 T 11-10-2018 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.6E-86 T 11-10-2018 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.6E-86 T 11-10-2018 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.6E-86 T 11-10-2018 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.6E-86 T 11-10-2018 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.6E-86 T 11-10-2018 IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 SUPERFAMILY SSF50249 2 112 4.77E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_09880 8d5498319ea47647ee6a1c94890eacd2 557 SUPERFAMILY SSF50249 429 533 2.24E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_10940 bc6bec0356b3bc7e5e496f7f891a7671 247 Gene3D G3DSA:3.40.50.2300 8 136 3.2E-37 T 11-10-2018 IX88_10940 bc6bec0356b3bc7e5e496f7f891a7671 247 SMART SM00862 161 237 1.4E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_10940 bc6bec0356b3bc7e5e496f7f891a7671 247 SUPERFAMILY SSF52172 8 137 2.28E-41 T 11-10-2018 IPR011006 CheY-like superfamily IX88_10940 bc6bec0356b3bc7e5e496f7f891a7671 247 SUPERFAMILY SSF46894 138 238 2.41E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 IX88_10940 bc6bec0356b3bc7e5e496f7f891a7671 247 Pfam PF00072 Response regulator receiver domain 15 123 2.3E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_10940 bc6bec0356b3bc7e5e496f7f891a7671 247 Gene3D G3DSA:1.10.10.10 137 239 7.2E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_10940 bc6bec0356b3bc7e5e496f7f891a7671 247 SMART SM00448 13 123 6.4E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_10940 bc6bec0356b3bc7e5e496f7f891a7671 247 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 237 3.2E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_10975 ff512fa5d04a72f51ee968bbbd6ea7b1 286 Gene3D G3DSA:3.40.50.720 1 276 1.5E-60 T 11-10-2018 IX88_10975 ff512fa5d04a72f51ee968bbbd6ea7b1 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.4E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10975 ff512fa5d04a72f51ee968bbbd6ea7b1 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.4E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10975 ff512fa5d04a72f51ee968bbbd6ea7b1 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.4E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10975 ff512fa5d04a72f51ee968bbbd6ea7b1 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.4E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10975 ff512fa5d04a72f51ee968bbbd6ea7b1 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.4E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10975 ff512fa5d04a72f51ee968bbbd6ea7b1 286 Pfam PF00106 short chain dehydrogenase 8 195 4.7E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10975 ff512fa5d04a72f51ee968bbbd6ea7b1 286 SUPERFAMILY SSF51735 1 264 8.34E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_10975 ff512fa5d04a72f51ee968bbbd6ea7b1 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.2E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10975 ff512fa5d04a72f51ee968bbbd6ea7b1 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.2E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10975 ff512fa5d04a72f51ee968bbbd6ea7b1 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.2E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10975 ff512fa5d04a72f51ee968bbbd6ea7b1 286 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_10975 ff512fa5d04a72f51ee968bbbd6ea7b1 286 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 191 0.0041 T 11-10-2018 IX88_13760 380faaa3d8385ebe18286cdee4d01a21 156 SMART SM01034 3 96 5.5E-34 T 11-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 IX88_13760 380faaa3d8385ebe18286cdee4d01a21 156 Gene3D G3DSA:3.30.70.100 2 128 9.9E-33 T 11-10-2018 IX88_13760 380faaa3d8385ebe18286cdee4d01a21 156 Pfam PF04940 Sensors of blue-light using FAD 4 95 3.5E-27 T 11-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 IX88_13760 380faaa3d8385ebe18286cdee4d01a21 156 SUPERFAMILY SSF54975 1 132 8.83E-37 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 IX88_05100 ed53bf345975d821ddbf9d1b16322aa1 768 SUPERFAMILY SSF109604 31 229 5.34E-44 T 11-10-2018 IX88_05100 ed53bf345975d821ddbf9d1b16322aa1 768 Pfam PF13291 ACT domain 689 763 2.5E-18 T 11-10-2018 IPR002912 ACT domain IX88_05100 ed53bf345975d821ddbf9d1b16322aa1 768 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 78 762 3.6E-170 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 IX88_05100 ed53bf345975d821ddbf9d1b16322aa1 768 Gene3D G3DSA:3.30.460.10 232 363 5.0E-50 T 11-10-2018 IX88_05100 ed53bf345975d821ddbf9d1b16322aa1 768 Gene3D G3DSA:1.10.3210.10 24 230 1.0E-40 T 11-10-2018 IX88_05100 ed53bf345975d821ddbf9d1b16322aa1 768 SMART SM00954 274 383 1.5E-59 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 IX88_05100 ed53bf345975d821ddbf9d1b16322aa1 768 Gene3D G3DSA:3.30.70.260 690 766 2.7E-17 T 11-10-2018 IX88_05100 ed53bf345975d821ddbf9d1b16322aa1 768 SUPERFAMILY SSF81271 433 493 2.18E-18 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 IX88_05100 ed53bf345975d821ddbf9d1b16322aa1 768 Pfam PF13328 HD domain 68 214 2.5E-37 T 11-10-2018 IPR003607 HD/PDEase domain IX88_05100 ed53bf345975d821ddbf9d1b16322aa1 768 Pfam PF02824 TGS domain 434 493 1.1E-18 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 IX88_05100 ed53bf345975d821ddbf9d1b16322aa1 768 SUPERFAMILY SSF55021 689 766 3.71E-13 T 11-10-2018 IX88_05100 ed53bf345975d821ddbf9d1b16322aa1 768 Pfam PF04607 Region found in RelA / SpoT proteins 274 383 1.7E-33 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 IX88_05100 ed53bf345975d821ddbf9d1b16322aa1 768 SUPERFAMILY SSF81301 231 395 1.52E-58 T 11-10-2018 IX88_05100 ed53bf345975d821ddbf9d1b16322aa1 768 Gene3D G3DSA:3.10.20.30 431 502 1.2E-28 T 11-10-2018 IPR012675 Beta-grasp domain superfamily IX88_10695 c03d3690b9bdf36e406a25eb715eccfb 352 Pfam PF12833 Helix-turn-helix domain 258 337 3.2E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_10695 c03d3690b9bdf36e406a25eb715eccfb 352 Pfam PF14525 AraC-binding-like domain 39 213 2.9E-39 T 11-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like IX88_10695 c03d3690b9bdf36e406a25eb715eccfb 352 SUPERFAMILY SSF46689 238 286 4.3E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_10695 c03d3690b9bdf36e406a25eb715eccfb 352 SMART SM00342 252 336 4.9E-29 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_10695 c03d3690b9bdf36e406a25eb715eccfb 352 SUPERFAMILY SSF46689 288 339 1.29E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_10695 c03d3690b9bdf36e406a25eb715eccfb 352 Gene3D G3DSA:1.10.10.60 237 340 1.3E-34 T 11-10-2018 IX88_04210 a96a701593a94e2b312b5215655b2a2a 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 57 18.057 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 IX88_04210 a96a701593a94e2b312b5215655b2a2a 64 Gene3D G3DSA:3.30.50.10 2 62 2.0E-21 T 11-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 IX88_04210 a96a701593a94e2b312b5215655b2a2a 64 SUPERFAMILY SSF57716 2 59 8.98E-20 T 11-10-2018 IX88_04210 a96a701593a94e2b312b5215655b2a2a 64 Pfam PF03884 DNA gyrase inhibitor YacG 6 53 1.4E-22 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 IX88_08240 9bab2e47a063deac18b6d405e365dc5f 71 Pfam PF00313 'Cold-shock' DNA-binding domain 5 66 5.5E-28 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 IX88_08240 9bab2e47a063deac18b6d405e365dc5f 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 35 - T 11-10-2018 IPR019844 Cold-shock conserved site IX88_08240 9bab2e47a063deac18b6d405e365dc5f 71 Gene3D G3DSA:2.40.50.140 4 67 9.9E-29 T 11-10-2018 IX88_08240 9bab2e47a063deac18b6d405e365dc5f 71 PIRSF PIRSF002599 1 71 5.3E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 IX88_08240 9bab2e47a063deac18b6d405e365dc5f 71 SMART SM00357 5 68 7.5E-31 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 IX88_08240 9bab2e47a063deac18b6d405e365dc5f 71 SUPERFAMILY SSF50249 4 68 6.09E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_08240 9bab2e47a063deac18b6d405e365dc5f 71 PRINTS PR00050 Cold shock protein signature 41 59 1.5E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 IX88_08240 9bab2e47a063deac18b6d405e365dc5f 71 PRINTS PR00050 Cold shock protein signature 26 35 1.5E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 IX88_08240 9bab2e47a063deac18b6d405e365dc5f 71 PRINTS PR00050 Cold shock protein signature 6 21 1.5E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 IX88_04010 89cfe717984d9331367e3e8ea0d9a24c 603 Pfam PF00361 Proton-conducting membrane transporter 143 431 2.7E-40 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_04010 89cfe717984d9331367e3e8ea0d9a24c 603 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 394 420 7.0E-9 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_04010 89cfe717984d9331367e3e8ea0d9a24c 603 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 178 202 7.0E-9 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_04010 89cfe717984d9331367e3e8ea0d9a24c 603 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 341 360 7.0E-9 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_04010 89cfe717984d9331367e3e8ea0d9a24c 603 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 251 275 7.0E-9 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_04010 89cfe717984d9331367e3e8ea0d9a24c 603 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 148 167 7.0E-9 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 SUPERFAMILY SSF54106 901 944 8.5E-9 T 11-10-2018 IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 SUPERFAMILY SSF54106 783 828 1.44E-9 T 11-10-2018 IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 SUPERFAMILY SSF54106 707 753 1.83E-5 T 11-10-2018 IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 SUPERFAMILY SSF54106 637 681 4.97E-8 T 11-10-2018 IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 SUPERFAMILY SSF54106 1022 1067 4.32E-8 T 11-10-2018 IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Pfam PF01464 Transglycosylase SLT domain 139 241 1.2E-23 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Gene3D G3DSA:3.10.350.10 698 765 6.6E-8 T 11-10-2018 IPR036779 LysM domain superfamily IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 SUPERFAMILY SSF54106 973 1018 4.97E-8 T 11-10-2018 IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 SMART SM00257 638 682 1.2E-10 T 11-10-2018 IPR018392 LysM domain IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 SMART SM00257 974 1018 1.5E-12 T 11-10-2018 IPR018392 LysM domain IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 SMART SM00257 901 945 2.8E-12 T 11-10-2018 IPR018392 LysM domain IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 SMART SM00257 708 753 1.1E-4 T 11-10-2018 IPR018392 LysM domain IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 SMART SM00257 784 828 3.8E-15 T 11-10-2018 IPR018392 LysM domain IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 SMART SM00257 575 619 5.4E-6 T 11-10-2018 IPR018392 LysM domain IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 SMART SM00257 1023 1067 5.0E-11 T 11-10-2018 IPR018392 LysM domain IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 SMART SM00257 836 880 4.1E-10 T 11-10-2018 IPR018392 LysM domain IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Gene3D G3DSA:3.10.350.10 1021 1069 5.6E-12 T 11-10-2018 IPR036779 LysM domain superfamily IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Gene3D G3DSA:3.10.350.10 833 887 6.5E-11 T 11-10-2018 IPR036779 LysM domain superfamily IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Gene3D G3DSA:3.10.350.10 566 626 1.1E-12 T 11-10-2018 IPR036779 LysM domain superfamily IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Gene3D G3DSA:3.10.350.10 959 1020 1.2E-12 T 11-10-2018 IPR036779 LysM domain superfamily IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Gene3D G3DSA:3.10.350.10 888 958 3.1E-14 T 11-10-2018 IPR036779 LysM domain superfamily IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Gene3D G3DSA:3.10.350.10 627 693 7.1E-12 T 11-10-2018 IPR036779 LysM domain superfamily IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Gene3D G3DSA:3.10.350.10 773 832 4.4E-15 T 11-10-2018 IPR036779 LysM domain superfamily IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 152 180 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Gene3D G3DSA:1.10.530.10 129 277 8.1E-31 T 11-10-2018 IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 SUPERFAMILY SSF53955 131 290 1.02E-41 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 SUPERFAMILY SSF54106 574 618 5.89E-9 T 11-10-2018 IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 SUPERFAMILY SSF54106 836 879 1.57E-7 T 11-10-2018 IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Pfam PF01476 LysM domain 902 944 2.7E-11 T 11-10-2018 IPR018392 LysM domain IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Pfam PF01476 LysM domain 1024 1067 6.6E-10 T 11-10-2018 IPR018392 LysM domain IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Pfam PF01476 LysM domain 639 681 1.0E-9 T 11-10-2018 IPR018392 LysM domain IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Pfam PF01476 LysM domain 975 1018 5.6E-10 T 11-10-2018 IPR018392 LysM domain IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Pfam PF01476 LysM domain 837 879 9.8E-10 T 11-10-2018 IPR018392 LysM domain IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Pfam PF01476 LysM domain 709 753 2.2E-6 T 11-10-2018 IPR018392 LysM domain IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Pfam PF01476 LysM domain 576 616 2.4E-10 T 11-10-2018 IPR018392 LysM domain IX88_07315 1a34b1a84ffaa424a6c7fa4a4b3dce52 1069 Pfam PF01476 LysM domain 785 828 1.2E-12 T 11-10-2018 IPR018392 LysM domain IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 SUPERFAMILY SSF50341 1215 1352 5.89E-22 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 SUPERFAMILY SSF47226 520 637 2.36E-24 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 SMART SM00073 23 122 0.021 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 SMART SM00073 196 291 0.05 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 SMART SM00073 521 618 9.1E-11 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 SMART SM00073 726 823 2.3E-10 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 SUPERFAMILY SSF47226 732 812 1.44E-16 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 Gene3D G3DSA:2.30.30.40 1216 1349 3.4E-34 T 11-10-2018 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 Gene3D G3DSA:2.40.50.180 1239 1308 3.4E-34 T 11-10-2018 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 SMART SM00260 1208 1354 1.1E-27 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 SUPERFAMILY SSF55874 1033 1213 4.06E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 Pfam PF00072 Response regulator receiver domain 1382 1493 3.1E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 Gene3D G3DSA:1.20.120.160 729 852 3.4E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 Gene3D G3DSA:1.20.120.160 23 151 7.1E-18 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 SMART SM01231 893 1030 4.0E-9 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1078 1214 8.6E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 Pfam PF01584 CheW-like domain 1221 1356 1.4E-21 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 SUPERFAMILY SSF47226 23 112 8.11E-19 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1176 1194 8.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1200 1213 8.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1120 1134 8.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 SUPERFAMILY SSF52172 1381 1497 7.97E-37 T 11-10-2018 IPR011006 CheY-like superfamily IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 Gene3D G3DSA:1.20.120.160 521 657 1.8E-22 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 Gene3D G3DSA:3.40.50.12740 1379 1505 1.1E-38 T 11-10-2018 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 Pfam PF01627 Hpt domain 523 612 4.7E-14 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 Pfam PF01627 Hpt domain 732 796 3.1E-13 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 Pfam PF01627 Hpt domain 199 281 8.7E-10 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 Pfam PF01627 Hpt domain 25 106 7.6E-12 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 SUPERFAMILY SSF47226 197 299 2.09E-14 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 Gene3D G3DSA:1.20.120.160 193 326 1.5E-13 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 SMART SM00387 1075 1216 1.0E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 SMART SM00448 1380 1493 2.4E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_17240 393939e6d7d7c49d50055f3522cc646d 1506 Gene3D G3DSA:3.30.565.10 1029 1215 1.9E-51 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_03245 e705d31771e7093e02845af162d81d91 207 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 23 197 2.8E-59 T 11-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG IX88_03245 e705d31771e7093e02845af162d81d91 207 SUPERFAMILY SSF102405 20 198 2.29E-59 T 11-10-2018 IX88_03245 e705d31771e7093e02845af162d81d91 207 Pfam PF03641 Possible lysine decarboxylase 66 193 6.7E-41 T 11-10-2018 IPR031100 LOG family IX88_03245 e705d31771e7093e02845af162d81d91 207 Gene3D G3DSA:3.40.50.450 23 206 3.9E-70 T 11-10-2018 IX88_16735 fea3d2980b2a748d1fc93a25be5c29ae 310 SMART SM00450 126 227 5.2E-23 T 11-10-2018 IPR001763 Rhodanese-like domain IX88_16735 fea3d2980b2a748d1fc93a25be5c29ae 310 Hamap MF_00469 UPF0176 protein YceA [yceA]. 17 267 43.132 T 11-10-2018 IPR020936 Uncharacterised protein family UPF0176 IX88_16735 fea3d2980b2a748d1fc93a25be5c29ae 310 Pfam PF00581 Rhodanese-like domain 128 223 3.8E-12 T 11-10-2018 IPR001763 Rhodanese-like domain IX88_16735 fea3d2980b2a748d1fc93a25be5c29ae 310 Gene3D G3DSA:3.30.70.100 9 110 1.2E-28 T 11-10-2018 IX88_16735 fea3d2980b2a748d1fc93a25be5c29ae 310 Gene3D G3DSA:3.40.250.10 114 260 1.9E-50 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily IX88_16735 fea3d2980b2a748d1fc93a25be5c29ae 310 SUPERFAMILY SSF52821 122 252 2.06E-33 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily IX88_03815 2e3793dae234db7fa288e8be1a600db3 186 Gene3D G3DSA:3.40.50.1820 1 186 1.4E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_03815 2e3793dae234db7fa288e8be1a600db3 186 SUPERFAMILY SSF53474 2 181 6.46E-31 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_03815 2e3793dae234db7fa288e8be1a600db3 186 Pfam PF06821 Serine hydrolase 5 180 2.7E-25 T 11-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 IX88_09365 689c7206e3f977b174026609b1a93cec 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.4E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_09365 689c7206e3f977b174026609b1a93cec 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.4E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_09365 689c7206e3f977b174026609b1a93cec 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.4E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_09365 689c7206e3f977b174026609b1a93cec 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.4E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_09365 689c7206e3f977b174026609b1a93cec 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 4.4E-160 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 IX88_09365 689c7206e3f977b174026609b1a93cec 363 PIRSF PIRSF006641 1 363 1.6E-156 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 IX88_09365 689c7206e3f977b174026609b1a93cec 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.6E-41 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 IX88_09365 689c7206e3f977b174026609b1a93cec 363 SUPERFAMILY SSF81271 279 360 7.19E-38 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 IX88_09365 689c7206e3f977b174026609b1a93cec 363 Gene3D G3DSA:3.40.50.300 4 278 5.3E-153 T 11-10-2018 IX88_09365 689c7206e3f977b174026609b1a93cec 363 Gene3D G3DSA:3.10.20.30 48 361 5.3E-153 T 11-10-2018 IPR012675 Beta-grasp domain superfamily IX88_09365 689c7206e3f977b174026609b1a93cec 363 SUPERFAMILY SSF52540 3 301 4.04E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_09365 689c7206e3f977b174026609b1a93cec 363 Pfam PF01926 50S ribosome-binding GTPase 5 128 8.4E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_09365 689c7206e3f977b174026609b1a93cec 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.249 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 IX88_09365 689c7206e3f977b174026609b1a93cec 363 Gene3D G3DSA:1.10.150.300 113 200 5.3E-153 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 IX88_13305 c3f4a9b16e7c44c3faedca7a17c10f1c 271 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 22 266 5.6E-85 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 IX88_13305 c3f4a9b16e7c44c3faedca7a17c10f1c 271 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 270 40.1 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 IX88_13305 c3f4a9b16e7c44c3faedca7a17c10f1c 271 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 17 270 2.0E-69 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 IX88_13305 c3f4a9b16e7c44c3faedca7a17c10f1c 271 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 177 183 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 IX88_13305 c3f4a9b16e7c44c3faedca7a17c10f1c 271 Gene3D G3DSA:1.10.8.10 2 81 5.5E-14 T 11-10-2018 IX88_13305 c3f4a9b16e7c44c3faedca7a17c10f1c 271 SUPERFAMILY SSF53335 15 268 4.95E-54 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_13305 c3f4a9b16e7c44c3faedca7a17c10f1c 271 Pfam PF05175 Methyltransferase small domain 92 194 9.1E-18 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 IX88_13305 c3f4a9b16e7c44c3faedca7a17c10f1c 271 Gene3D G3DSA:3.40.50.150 83 270 2.9E-58 T 11-10-2018 IX88_17015 e64d2d17e5d540544bbc53f474abd1fa 266 Pfam PF08223 PaaX-like protein C-terminal domain 171 257 1.9E-5 T 11-10-2018 IPR013225 PaaX-like, C-terminal IX88_17015 e64d2d17e5d540544bbc53f474abd1fa 266 Gene3D G3DSA:1.10.10.10 4 72 4.7E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_17840 b4ef5f422f702a91d8c2f57ec6100b23 493 SUPERFAMILY SSF49373 175 247 3.06E-5 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments IX88_17840 b4ef5f422f702a91d8c2f57ec6100b23 493 Gene3D G3DSA:2.60.40.10 178 262 5.8E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_15205 a11a9b60dfb42c1c391ce45e44825aee 980 SUPERFAMILY SSF52777 467 650 2.89E-13 T 11-10-2018 IX88_15205 a11a9b60dfb42c1c391ce45e44825aee 980 Pfam PF00668 Condensation domain 26 456 2.7E-34 T 11-10-2018 IPR001242 Condensation domain IX88_15205 a11a9b60dfb42c1c391ce45e44825aee 980 Pfam PF00668 Condensation domain 496 868 3.5E-21 T 11-10-2018 IPR001242 Condensation domain IX88_15205 a11a9b60dfb42c1c391ce45e44825aee 980 Gene3D G3DSA:3.30.559.10 23 200 1.1E-33 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 IX88_15205 a11a9b60dfb42c1c391ce45e44825aee 980 Gene3D G3DSA:3.30.559.10 465 642 5.1E-30 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 IX88_15205 a11a9b60dfb42c1c391ce45e44825aee 980 SUPERFAMILY SSF52777 29 200 1.22E-16 T 11-10-2018 IX88_15205 a11a9b60dfb42c1c391ce45e44825aee 980 SUPERFAMILY SSF52777 643 864 1.67E-34 T 11-10-2018 IX88_15205 a11a9b60dfb42c1c391ce45e44825aee 980 SUPERFAMILY SSF52777 209 453 1.45E-40 T 11-10-2018 IX88_15205 a11a9b60dfb42c1c391ce45e44825aee 980 Gene3D G3DSA:3.30.559.30 643 877 5.0E-35 T 11-10-2018 IX88_15205 a11a9b60dfb42c1c391ce45e44825aee 980 Gene3D G3DSA:3.30.559.30 207 462 1.9E-61 T 11-10-2018 IX88_01800 b035732fb4a3f95148773cb96a56870e 306 PRINTS PR00116 Arginase signature 266 280 1.4E-8 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 IX88_01800 b035732fb4a3f95148773cb96a56870e 306 PRINTS PR00116 Arginase signature 112 127 1.4E-8 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 IX88_01800 b035732fb4a3f95148773cb96a56870e 306 PRINTS PR00116 Arginase signature 231 260 1.4E-8 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 IX88_01800 b035732fb4a3f95148773cb96a56870e 306 Gene3D G3DSA:3.40.800.10 1 306 5.2E-112 T 11-10-2018 IX88_01800 b035732fb4a3f95148773cb96a56870e 306 SUPERFAMILY SSF52768 11 304 2.34E-80 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily IX88_01800 b035732fb4a3f95148773cb96a56870e 306 PIRSF PIRSF036979 13 306 9.5E-32 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 IX88_01800 b035732fb4a3f95148773cb96a56870e 306 TIGRFAM TIGR01227 hutG: formimidoylglutamase 18 303 3.1E-89 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 IX88_01800 b035732fb4a3f95148773cb96a56870e 306 Pfam PF00491 Arginase family 32 303 5.3E-63 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 IX88_01800 b035732fb4a3f95148773cb96a56870e 306 Hamap MF_00737 Formimidoylglutamase [hutG]. 2 305 39.732 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 IX88_01800 b035732fb4a3f95148773cb96a56870e 306 ProSitePatterns PS01053 Arginase family signature. 234 255 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 IX88_15165 bacf60177426230202c1e7185458d38d 251 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 136 222 3.3E-11 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IX88_15165 bacf60177426230202c1e7185458d38d 251 Gene3D G3DSA:3.90.470.20 135 250 2.5E-7 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IX88_15165 bacf60177426230202c1e7185458d38d 251 SUPERFAMILY SSF56214 137 250 4.88E-13 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IX88_15165 bacf60177426230202c1e7185458d38d 251 PRINTS PR01399 Enterobactin synthetase component D signature 96 114 7.3E-8 T 11-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 IX88_15165 bacf60177426230202c1e7185458d38d 251 PRINTS PR01399 Enterobactin synthetase component D signature 66 86 7.3E-8 T 11-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 IX88_02220 82007c6d68d960f029dfa4f67ba6a2f3 586 Gene3D G3DSA:2.70.98.90 81 373 3.0E-100 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily IX88_02220 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR01900 YidC translocation/secretion protein signature 508 523 8.5E-24 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IX88_02220 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR01900 YidC translocation/secretion protein signature 527 551 8.5E-24 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IX88_02220 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR01900 YidC translocation/secretion protein signature 379 395 8.5E-24 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IX88_02220 82007c6d68d960f029dfa4f67ba6a2f3 586 Pfam PF02096 60Kd inner membrane protein 394 572 1.4E-60 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IX88_02220 82007c6d68d960f029dfa4f67ba6a2f3 586 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 393 572 7.7E-71 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_02220 82007c6d68d960f029dfa4f67ba6a2f3 586 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 5 392 6.2E-104 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal IX88_02220 82007c6d68d960f029dfa4f67ba6a2f3 586 Pfam PF14849 YidC periplasmic domain 85 381 5.4E-70 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain IX88_02220 82007c6d68d960f029dfa4f67ba6a2f3 586 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 574 23.236 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 IX88_02220 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR00701 60kDa inner membrane protein signature 249 267 3.6E-68 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IX88_02220 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR00701 60kDa inner membrane protein signature 455 478 3.6E-68 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IX88_02220 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR00701 60kDa inner membrane protein signature 502 524 3.6E-68 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IX88_02220 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR00701 60kDa inner membrane protein signature 364 384 3.6E-68 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IX88_02220 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR00701 60kDa inner membrane protein signature 538 561 3.6E-68 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IX88_02220 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR00701 60kDa inner membrane protein signature 3 24 3.6E-68 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IX88_02220 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR00701 60kDa inner membrane protein signature 90 111 3.6E-68 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IX88_02220 82007c6d68d960f029dfa4f67ba6a2f3 586 PRINTS PR00701 60kDa inner membrane protein signature 282 297 3.6E-68 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 IX88_16250 8c716d7035e65ed07bee0584accaffee 201 Pfam PF00881 Nitroreductase family 7 178 4.0E-30 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 IX88_16250 8c716d7035e65ed07bee0584accaffee 201 SUPERFAMILY SSF55469 1 196 9.95E-51 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IX88_16250 8c716d7035e65ed07bee0584accaffee 201 Gene3D G3DSA:3.40.109.10 1 197 9.7E-48 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IX88_17670 ec58bd8bbb6ffee379eeb35349401e07 229 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 9 207 7.3E-10 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain IX88_17670 ec58bd8bbb6ffee379eeb35349401e07 229 SUPERFAMILY SSF52266 4 218 9.87E-19 T 11-10-2018 IX88_17670 ec58bd8bbb6ffee379eeb35349401e07 229 Gene3D G3DSA:3.40.50.1110 5 220 6.6E-22 T 11-10-2018 IPR036514 SGNH hydrolase superfamily IX88_03860 7224d42a243232cdd8ad37e75e94e7a7 284 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 197 275 2.8E-27 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 IX88_03860 7224d42a243232cdd8ad37e75e94e7a7 284 Gene3D G3DSA:3.30.160.70 107 194 4.4E-18 T 11-10-2018 IX88_03860 7224d42a243232cdd8ad37e75e94e7a7 284 Gene3D G3DSA:1.10.10.10 195 280 1.2E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_03860 7224d42a243232cdd8ad37e75e94e7a7 284 SMART SM00342 26 108 1.4E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_03860 7224d42a243232cdd8ad37e75e94e7a7 284 SUPERFAMILY SSF46767 195 275 2.09E-28 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 IX88_03860 7224d42a243232cdd8ad37e75e94e7a7 284 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 196 275 2.6E-30 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 IX88_03860 7224d42a243232cdd8ad37e75e94e7a7 284 Pfam PF12833 Helix-turn-helix domain 33 109 2.0E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_03860 7224d42a243232cdd8ad37e75e94e7a7 284 Gene3D G3DSA:1.10.10.60 10 106 5.2E-18 T 11-10-2018 IX88_03860 7224d42a243232cdd8ad37e75e94e7a7 284 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 246 252 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 IX88_03860 7224d42a243232cdd8ad37e75e94e7a7 284 SUPERFAMILY SSF46689 11 60 4.3E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_03860 7224d42a243232cdd8ad37e75e94e7a7 284 SUPERFAMILY SSF53155 115 193 4.32E-15 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 IX88_00275 263448f2ddbb70683b4a42f2f4f07e50 258 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 4 257 6.8E-83 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria IX88_00275 263448f2ddbb70683b4a42f2f4f07e50 258 Pfam PF02405 Permease MlaE 41 252 3.7E-71 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 IX88_16155 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Gene3D G3DSA:1.10.268.10 368 496 4.1E-222 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 IX88_16155 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 872 23.799 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_16155 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Gene3D G3DSA:3.90.199.10 31 524 4.1E-222 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 IX88_16155 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 SMART SM00434 9 502 3.0E-271 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IX88_16155 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Gene3D G3DSA:2.120.10.90 533 871 5.5E-116 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal IX88_16155 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 6 870 0.0 T 11-10-2018 IX88_16155 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 SUPERFAMILY SSF101904 536 880 4.05E-100 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal IX88_16155 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 SUPERFAMILY SSF56719 28 525 3.79E-176 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 IX88_16155 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 648 691 8.8E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 IX88_16155 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 774 820 7.8E-16 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 IX88_16155 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 696 739 2.1E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 IX88_16155 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 593 640 3.9E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 IX88_16155 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 543 587 3.5E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 IX88_16155 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 825 870 8.6E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 IX88_16155 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Gene3D G3DSA:3.30.1360.40 234 331 4.1E-222 T 11-10-2018 IX88_16155 e04a72b9e03b5ebbbbf372fc7cb0da9f 904 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 30 509 1.4E-153 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IX88_15250 e3652751a22049cb1af30098a6b75d66 286 Pfam PF04954 Siderophore-interacting protein 136 252 5.7E-22 T 11-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain IX88_15250 e3652751a22049cb1af30098a6b75d66 286 Pfam PF08021 Siderophore-interacting FAD-binding domain 69 125 2.5E-13 T 11-10-2018 IPR013113 FAD-binding 9, siderophore-interacting IX88_15250 e3652751a22049cb1af30098a6b75d66 286 Gene3D G3DSA:2.40.30.10 22 126 4.4E-15 T 11-10-2018 IX88_15250 e3652751a22049cb1af30098a6b75d66 286 Gene3D G3DSA:3.40.50.80 131 273 3.9E-24 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_15250 e3652751a22049cb1af30098a6b75d66 286 SUPERFAMILY SSF63380 28 129 5.83E-5 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel IX88_09050 148b3858a78533e3f2c84f624768404d 197 Gene3D G3DSA:3.40.630.30 1 194 1.3E-42 T 11-10-2018 IX88_09050 148b3858a78533e3f2c84f624768404d 197 SUPERFAMILY SSF55729 5 179 1.76E-37 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_09050 148b3858a78533e3f2c84f624768404d 197 Pfam PF13302 Acetyltransferase (GNAT) domain 14 153 1.1E-12 T 11-10-2018 IPR000182 GNAT domain IX88_10825 cb93020a5c35f26475f03ffd8315959b 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 1.1E-25 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 IX88_10825 cb93020a5c35f26475f03ffd8315959b 369 SUPERFAMILY SSF50129 318 369 1.88E-11 T 11-10-2018 IPR011032 GroES-like superfamily IX88_10825 cb93020a5c35f26475f03ffd8315959b 369 Gene3D G3DSA:3.40.50.720 174 312 1.0E-149 T 11-10-2018 IX88_10825 cb93020a5c35f26475f03ffd8315959b 369 SMART SM00829 12 367 1.1E-4 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 IX88_10825 cb93020a5c35f26475f03ffd8315959b 369 SUPERFAMILY SSF51735 161 333 4.34E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_10825 cb93020a5c35f26475f03ffd8315959b 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 4.1E-222 T 11-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 IX88_10825 cb93020a5c35f26475f03ffd8315959b 369 Pfam PF00107 Zinc-binding dehydrogenase 197 330 5.3E-25 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 IX88_10825 cb93020a5c35f26475f03ffd8315959b 369 Gene3D G3DSA:3.90.180.10 6 364 1.0E-149 T 11-10-2018 IX88_10825 cb93020a5c35f26475f03ffd8315959b 369 SUPERFAMILY SSF50129 1 184 1.35E-70 T 11-10-2018 IPR011032 GroES-like superfamily IX88_10825 cb93020a5c35f26475f03ffd8315959b 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 IX88_05825 7788586c7e8653393a66810b5371caeb 253 Pfam PF00175 Oxidoreductase NAD-binding domain 116 229 1.4E-13 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 IX88_05825 7788586c7e8653393a66810b5371caeb 253 Pfam PF00970 Oxidoreductase FAD-binding domain 20 94 1.1E-7 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 IX88_05825 7788586c7e8653393a66810b5371caeb 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 115 134 3.2E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 IX88_05825 7788586c7e8653393a66810b5371caeb 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 3.2E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 IX88_05825 7788586c7e8653393a66810b5371caeb 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 53 60 3.2E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 IX88_05825 7788586c7e8653393a66810b5371caeb 253 Gene3D G3DSA:2.40.30.10 1 97 8.0E-29 T 11-10-2018 IX88_05825 7788586c7e8653393a66810b5371caeb 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 115 134 4.4E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_05825 7788586c7e8653393a66810b5371caeb 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 140 149 4.4E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_05825 7788586c7e8653393a66810b5371caeb 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 4.4E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_05825 7788586c7e8653393a66810b5371caeb 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 34 46 4.4E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_05825 7788586c7e8653393a66810b5371caeb 253 Gene3D G3DSA:3.40.50.80 99 253 1.0E-38 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_05825 7788586c7e8653393a66810b5371caeb 253 SUPERFAMILY SSF63380 7 101 4.12E-24 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel IX88_05825 7788586c7e8653393a66810b5371caeb 253 SUPERFAMILY SSF52343 109 251 4.71E-32 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_17080 87cd53bc3f5bfe9b536fa193f50f8bc0 346 Gene3D G3DSA:3.30.420.40 157 320 4.1E-126 T 11-10-2018 IX88_17080 87cd53bc3f5bfe9b536fa193f50f8bc0 346 Pfam PF06723 MreB/Mbl protein 13 337 1.4E-140 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 IX88_17080 87cd53bc3f5bfe9b536fa193f50f8bc0 346 SUPERFAMILY SSF53067 10 151 2.59E-36 T 11-10-2018 IX88_17080 87cd53bc3f5bfe9b536fa193f50f8bc0 346 Gene3D G3DSA:3.30.420.40 14 330 4.1E-126 T 11-10-2018 IX88_17080 87cd53bc3f5bfe9b536fa193f50f8bc0 346 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 337 3.3E-146 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 IX88_17080 87cd53bc3f5bfe9b536fa193f50f8bc0 346 SUPERFAMILY SSF53067 153 337 4.05E-48 T 11-10-2018 IX88_17080 87cd53bc3f5bfe9b536fa193f50f8bc0 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 3.2E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 IX88_17080 87cd53bc3f5bfe9b536fa193f50f8bc0 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 51 69 3.2E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 IX88_17080 87cd53bc3f5bfe9b536fa193f50f8bc0 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 71 94 3.2E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 IX88_17080 87cd53bc3f5bfe9b536fa193f50f8bc0 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 3.2E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 IX88_17080 87cd53bc3f5bfe9b536fa193f50f8bc0 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 3.2E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 IX88_17080 87cd53bc3f5bfe9b536fa193f50f8bc0 346 Gene3D G3DSA:3.90.640.10 189 262 4.1E-126 T 11-10-2018 IX88_00325 084527fc359e99d07d8bfbeed5a8abf0 607 SUPERFAMILY SSF56645 36 280 8.51E-62 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_00325 084527fc359e99d07d8bfbeed5a8abf0 607 Gene3D G3DSA:1.10.540.10 34 159 2.3E-21 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_00325 084527fc359e99d07d8bfbeed5a8abf0 607 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 27 3.9E-7 T 11-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria IX88_00325 084527fc359e99d07d8bfbeed5a8abf0 607 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 457 8.7E-21 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_00325 084527fc359e99d07d8bfbeed5a8abf0 607 Gene3D G3DSA:1.20.140.10 288 464 3.6E-41 T 11-10-2018 IX88_00325 084527fc359e99d07d8bfbeed5a8abf0 607 Gene3D G3DSA:2.40.110.10 161 287 1.1E-29 T 11-10-2018 IX88_00325 084527fc359e99d07d8bfbeed5a8abf0 607 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 2.0E-18 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_00325 084527fc359e99d07d8bfbeed5a8abf0 607 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 472 599 4.2E-31 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain IX88_00325 084527fc359e99d07d8bfbeed5a8abf0 607 SUPERFAMILY SSF47203 287 475 1.53E-45 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_00325 084527fc359e99d07d8bfbeed5a8abf0 607 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 157 7.1E-18 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_09385 bce21cabb6ef3553f9cff0a400ba9153 276 Pfam PF03180 NLPA lipoprotein 37 265 8.1E-73 T 11-10-2018 IPR004872 Lipoprotein NlpA family IX88_09385 bce21cabb6ef3553f9cff0a400ba9153 276 SUPERFAMILY SSF53850 37 273 1.38E-67 T 11-10-2018 IX88_09385 bce21cabb6ef3553f9cff0a400ba9153 276 Gene3D G3DSA:3.40.190.10 44 264 9.3E-72 T 11-10-2018 IX88_09385 bce21cabb6ef3553f9cff0a400ba9153 276 Gene3D G3DSA:3.40.190.10 117 222 9.3E-72 T 11-10-2018 IX88_17700 25853e629aab7346a450243cf3e8a20d 308 Pfam PF01063 Amino-transferase class IV 36 268 6.2E-53 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 IX88_17700 25853e629aab7346a450243cf3e8a20d 308 Gene3D G3DSA:3.20.10.10 131 308 7.4E-53 T 11-10-2018 IX88_17700 25853e629aab7346a450243cf3e8a20d 308 Gene3D G3DSA:3.30.470.10 2 130 2.5E-39 T 11-10-2018 IX88_17700 25853e629aab7346a450243cf3e8a20d 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 307 4.3E-129 T 11-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 IX88_17700 25853e629aab7346a450243cf3e8a20d 308 SUPERFAMILY SSF56752 2 304 3.92E-102 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 SMART SM00437 291 545 2.0E-122 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 SMART SM00436 153 241 2.6E-48 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 SUPERFAMILY SSF57783 758 820 3.91E-15 T 11-10-2018 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 Pfam PF01751 Toprim domain 24 162 6.7E-32 T 11-10-2018 IPR006171 TOPRIM domain IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 SUPERFAMILY SSF57783 823 877 2.38E-17 T 11-10-2018 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 Pfam PF08272 Topoisomerase I zinc-ribbon-like 838 877 9.0E-17 T 11-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 Pfam PF08272 Topoisomerase I zinc-ribbon-like 772 807 8.7E-12 T 11-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 Gene3D G3DSA:2.20.25.10 822 878 5.6E-22 T 11-10-2018 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 SUPERFAMILY SSF57783 597 638 1.28E-10 T 11-10-2018 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 Pfam PF01131 DNA topoisomerase 178 583 1.1E-127 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 SUPERFAMILY SSF57783 716 756 1.24E-6 T 11-10-2018 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 613 638 1.3E-6 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 727 758 5.8E-6 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 SUPERFAMILY SSF56712 23 625 2.22E-201 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 Gene3D G3DSA:1.10.290.10 299 423 7.7E-158 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 Gene3D G3DSA:3.30.65.10 597 663 3.6E-6 T 11-10-2018 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 Gene3D G3DSA:3.30.65.10 713 758 6.7E-7 T 11-10-2018 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 Gene3D G3DSA:3.30.65.10 759 821 6.8E-22 T 11-10-2018 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 Gene3D G3DSA:2.70.20.10 233 491 7.7E-158 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 126 139 3.2E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 409 425 3.2E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 508 522 3.2E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 211 229 3.2E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 333 342 3.2E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 SMART SM00493 22 152 1.4E-29 T 11-10-2018 IPR006171 TOPRIM domain IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 Hamap MF_00952 DNA topoisomerase 1 [topA]. 22 748 55.455 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 Gene3D G3DSA:1.10.460.10 185 589 7.7E-158 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 24 648 1.7E-244 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 Gene3D G3DSA:3.40.50.140 20 183 5.4E-67 T 11-10-2018 IX88_04490 f6b20193332e34b75d1de7e6ef50e7b6 878 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 328 342 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 IX88_11500 6dc25b5ce8a65ae021be43b7cd3b6ad3 369 ProSitePatterns PS00571 Amidases signature. 94 125 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 IX88_11500 6dc25b5ce8a65ae021be43b7cd3b6ad3 369 SUPERFAMILY SSF75304 17 367 3.4E-95 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 IX88_11500 6dc25b5ce8a65ae021be43b7cd3b6ad3 369 Pfam PF01425 Amidase 223 358 1.8E-19 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 IX88_11500 6dc25b5ce8a65ae021be43b7cd3b6ad3 369 Pfam PF01425 Amidase 17 172 1.6E-61 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 IX88_11500 6dc25b5ce8a65ae021be43b7cd3b6ad3 369 Gene3D G3DSA:3.90.1300.10 12 368 6.2E-101 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 IX88_16765 7db869094969ba3e062718a8768fff42 177 Gene3D G3DSA:3.30.1050.10 19 134 4.5E-6 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily IX88_16765 7db869094969ba3e062718a8768fff42 177 SUPERFAMILY SSF55718 49 131 2.03E-5 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily IX88_15620 00318c4a9815df69bc3da8dc64cf1b4f 160 Gene3D G3DSA:3.10.50.40 4 154 1.0E-57 T 11-10-2018 IX88_15620 00318c4a9815df69bc3da8dc64cf1b4f 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 4.3E-15 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain IX88_15620 00318c4a9815df69bc3da8dc64cf1b4f 160 SUPERFAMILY SSF54534 4 140 9.62E-39 T 11-10-2018 IX88_15620 00318c4a9815df69bc3da8dc64cf1b4f 160 Gene3D G3DSA:2.40.10.330 71 121 1.0E-57 T 11-10-2018 IX88_12820 48ab65bdcfcfe33177b07f1a87b5ab76 297 SUPERFAMILY SSF46785 2 82 5.33E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_12820 48ab65bdcfcfe33177b07f1a87b5ab76 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 5.0E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_12820 48ab65bdcfcfe33177b07f1a87b5ab76 297 Gene3D G3DSA:1.10.10.10 1 87 3.9E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_12820 48ab65bdcfcfe33177b07f1a87b5ab76 297 SUPERFAMILY SSF53850 90 290 1.01E-24 T 11-10-2018 IX88_12820 48ab65bdcfcfe33177b07f1a87b5ab76 297 Pfam PF03466 LysR substrate binding domain 109 290 2.9E-20 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_12820 48ab65bdcfcfe33177b07f1a87b5ab76 297 Gene3D G3DSA:3.40.190.290 94 276 1.8E-25 T 11-10-2018 IX88_01645 d826c343ae0b2c6b0bb19b5c5422b64d 1133 Gene3D G3DSA:2.30.110.50 32 377 1.7E-43 T 11-10-2018 IX88_01645 d826c343ae0b2c6b0bb19b5c5422b64d 1133 Gene3D G3DSA:2.40.50.230 429 538 3.4E-31 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily IX88_01645 d826c343ae0b2c6b0bb19b5c5422b64d 1133 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 850 997 4.9E-43 T 11-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal IX88_01645 d826c343ae0b2c6b0bb19b5c5422b64d 1133 SUPERFAMILY SSF69279 24 216 6.23E-40 T 11-10-2018 IX88_01645 d826c343ae0b2c6b0bb19b5c5422b64d 1133 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 561 668 1.9E-36 T 11-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain IX88_01645 d826c343ae0b2c6b0bb19b5c5422b64d 1133 Pfam PF05954 Phage late control gene D protein (GPD) 44 384 1.1E-60 T 11-10-2018 IX88_01645 d826c343ae0b2c6b0bb19b5c5422b64d 1133 Gene3D G3DSA:3.30.1920.30 254 336 1.7E-43 T 11-10-2018 IX88_01645 d826c343ae0b2c6b0bb19b5c5422b64d 1133 SUPERFAMILY SSF69255 438 532 4.45E-24 T 11-10-2018 IX88_01645 d826c343ae0b2c6b0bb19b5c5422b64d 1133 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 35 588 4.6E-56 T 11-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein IX88_01645 d826c343ae0b2c6b0bb19b5c5422b64d 1133 Gene3D G3DSA:3.55.50.10 111 221 1.7E-43 T 11-10-2018 IX88_01645 d826c343ae0b2c6b0bb19b5c5422b64d 1133 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 25 586 5.2E-71 T 11-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset IX88_08330 09fcadde2a7c68daa9db99c977a4c3a0 182 Gene3D G3DSA:2.60.450.10 34 175 5.3E-41 T 11-10-2018 IX88_08330 09fcadde2a7c68daa9db99c977a4c3a0 182 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 32 171 5.6E-38 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 IX88_08330 09fcadde2a7c68daa9db99c977a4c3a0 182 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 12 172 23.032 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 IX88_08330 09fcadde2a7c68daa9db99c977a4c3a0 182 Pfam PF03968 OstA-like protein 44 153 4.7E-26 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal IX88_03515 dbb319b75cbdf29617c48ca1f5cfe462 89 Gene3D G3DSA:1.10.3880.10 1 89 2.1E-34 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 IX88_03515 dbb319b75cbdf29617c48ca1f5cfe462 89 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 25.915 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 IX88_03515 dbb319b75cbdf29617c48ca1f5cfe462 89 SUPERFAMILY SSF111148 1 88 9.55E-36 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 IX88_03515 dbb319b75cbdf29617c48ca1f5cfe462 89 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 3.0E-39 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 IX88_03515 dbb319b75cbdf29617c48ca1f5cfe462 89 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 73 8.0E-35 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 IX88_03515 dbb319b75cbdf29617c48ca1f5cfe462 89 PIRSF PIRSF029827 1 89 2.5E-38 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 IX88_13650 67f006a081336519d661607fd0393fff 205 Pfam PF04403 Paraquat-inducible protein A 45 197 2.3E-38 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like IX88_13415 b6da6db91a1327b6209be819192e12e3 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.648 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_13415 b6da6db91a1327b6209be819192e12e3 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13415 b6da6db91a1327b6209be819192e12e3 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 2.5E-26 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal IX88_13415 b6da6db91a1327b6209be819192e12e3 148 Gene3D G3DSA:3.40.5.10 1 50 1.0E-21 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13415 b6da6db91a1327b6209be819192e12e3 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 2 148 5.6E-49 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_13415 b6da6db91a1327b6209be819192e12e3 148 SUPERFAMILY SSF55658 1 57 4.53E-18 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal IX88_13415 b6da6db91a1327b6209be819192e12e3 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 2 46 7.8E-21 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13415 b6da6db91a1327b6209be819192e12e3 148 Gene3D G3DSA:3.10.430.100 61 148 2.8E-29 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily IX88_13415 b6da6db91a1327b6209be819192e12e3 148 SUPERFAMILY SSF55653 60 148 2.62E-26 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily IX88_17170 50c03e82629c142191f64221fc185d6e 848 Pfam PF03929 PepSY-associated TM region 7 368 2.2E-62 T 11-10-2018 IPR005625 PepSY-associated TM protein IX88_17170 50c03e82629c142191f64221fc185d6e 848 SUPERFAMILY SSF52218 392 539 2.23E-38 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_17170 50c03e82629c142191f64221fc185d6e 848 SUPERFAMILY SSF52343 709 848 4.45E-36 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_17170 50c03e82629c142191f64221fc185d6e 848 Gene3D G3DSA:1.20.990.10 550 677 3.7E-6 T 11-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 IX88_17170 50c03e82629c142191f64221fc185d6e 848 Pfam PF00258 Flavodoxin 396 523 2.4E-25 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 IX88_17170 50c03e82629c142191f64221fc185d6e 848 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 807 815 1.3E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 IX88_17170 50c03e82629c142191f64221fc185d6e 848 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 784 800 1.3E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 IX88_17170 50c03e82629c142191f64221fc185d6e 848 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 652 659 1.3E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 IX88_17170 50c03e82629c142191f64221fc185d6e 848 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 740 749 1.3E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 IX88_17170 50c03e82629c142191f64221fc185d6e 848 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 716 735 1.3E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 IX88_17170 50c03e82629c142191f64221fc185d6e 848 Gene3D G3DSA:3.40.50.80 706 848 3.9E-40 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_17170 50c03e82629c142191f64221fc185d6e 848 Pfam PF00175 Oxidoreductase NAD-binding domain 718 822 2.2E-9 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 IX88_17170 50c03e82629c142191f64221fc185d6e 848 SUPERFAMILY SSF63380 551 707 2.92E-18 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel IX88_17170 50c03e82629c142191f64221fc185d6e 848 Gene3D G3DSA:3.40.50.360 378 546 1.0E-37 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_17170 50c03e82629c142191f64221fc185d6e 848 PRINTS PR00369 Flavodoxin signature 395 408 1.3E-10 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 IX88_17170 50c03e82629c142191f64221fc185d6e 848 PRINTS PR00369 Flavodoxin signature 474 484 1.3E-10 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 IX88_17170 50c03e82629c142191f64221fc185d6e 848 PRINTS PR00369 Flavodoxin signature 499 518 1.3E-10 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 IX88_17170 50c03e82629c142191f64221fc185d6e 848 PRINTS PR00369 Flavodoxin signature 443 454 1.3E-10 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 IX88_09020 bbc3205063ab26a0ee1e46ce331ed31a 208 Pfam PF14834 Glutathione S-transferase, C-terminal domain 92 206 2.1E-46 T 11-10-2018 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|KEGG: 00983+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 IX88_09020 bbc3205063ab26a0ee1e46ce331ed31a 208 SUPERFAMILY SSF47616 84 204 3.92E-13 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IX88_09020 bbc3205063ab26a0ee1e46ce331ed31a 208 Gene3D G3DSA:1.20.1050.10 87 195 1.8E-82 T 11-10-2018 IX88_09020 bbc3205063ab26a0ee1e46ce331ed31a 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 85 8.8E-15 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 IX88_09020 bbc3205063ab26a0ee1e46ce331ed31a 208 Gene3D G3DSA:3.40.30.10 8 203 1.8E-82 T 11-10-2018 IX88_09020 bbc3205063ab26a0ee1e46ce331ed31a 208 SUPERFAMILY SSF52833 7 91 7.18E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_07150 c9d68f4c30154a0061e60e487e1f6ab9 263 Pfam PF04060 Putative Fe-S cluster 15 47 1.5E-9 T 11-10-2018 IPR007202 4Fe-4S domain GO:0051536 IX88_07150 c9d68f4c30154a0061e60e487e1f6ab9 263 Gene3D G3DSA:3.30.70.20 66 161 1.2E-19 T 11-10-2018 IX88_07150 c9d68f4c30154a0061e60e487e1f6ab9 263 SUPERFAMILY SSF54862 10 142 1.88E-25 T 11-10-2018 IX88_07150 c9d68f4c30154a0061e60e487e1f6ab9 263 Pfam PF14697 4Fe-4S dicluster domain 85 138 1.5E-15 T 11-10-2018 IX88_07150 c9d68f4c30154a0061e60e487e1f6ab9 263 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 5 153 8.0E-56 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 IX88_07150 c9d68f4c30154a0061e60e487e1f6ab9 263 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 92 103 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IX88_07150 c9d68f4c30154a0061e60e487e1f6ab9 263 Gene3D G3DSA:3.20.20.20 7 65 2.9E-7 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_07150 c9d68f4c30154a0061e60e487e1f6ab9 263 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 122 133 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IX88_15170 13bbbf91cedb63197ac84db44543406e 244 Gene3D G3DSA:3.40.50.1820 5 242 2.3E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_15170 13bbbf91cedb63197ac84db44543406e 244 SUPERFAMILY SSF53474 5 229 1.13E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_15170 13bbbf91cedb63197ac84db44543406e 244 Pfam PF00975 Thioesterase domain 8 234 2.4E-30 T 11-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 IX88_08635 0d1eef78d12ac8744db7bc0702c492c1 271 SUPERFAMILY SSF46785 25 94 5.4E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_08635 0d1eef78d12ac8744db7bc0702c492c1 271 Pfam PF09339 IclR helix-turn-helix domain 26 75 8.9E-16 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 IX88_08635 0d1eef78d12ac8744db7bc0702c492c1 271 Gene3D G3DSA:1.10.10.10 11 82 4.8E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_08635 0d1eef78d12ac8744db7bc0702c492c1 271 SMART SM00346 23 111 1.9E-32 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 IX88_08635 0d1eef78d12ac8744db7bc0702c492c1 271 Pfam PF01614 Bacterial transcriptional regulator 145 269 7.5E-40 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal IX88_08635 0d1eef78d12ac8744db7bc0702c492c1 271 SUPERFAMILY SSF55781 92 269 2.71E-39 T 11-10-2018 IX88_08635 0d1eef78d12ac8744db7bc0702c492c1 271 Gene3D G3DSA:3.30.450.40 90 271 3.3E-49 T 11-10-2018 IPR029016 GAF-like domain superfamily IX88_08635 0d1eef78d12ac8744db7bc0702c492c1 271 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 20 270 8.0E-98 T 11-10-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 IX88_09280 9a1b124a8100c593fee1c62936b0ec16 355 PIRSF PIRSF001220 22 355 2.8E-90 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 IX88_09280 9a1b124a8100c593fee1c62936b0ec16 355 PRINTS PR00139 Asparaginase/glutaminase family signature 289 307 1.4E-20 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 IX88_09280 9a1b124a8100c593fee1c62936b0ec16 355 PRINTS PR00139 Asparaginase/glutaminase family signature 108 126 1.4E-20 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 IX88_09280 9a1b124a8100c593fee1c62936b0ec16 355 PRINTS PR00139 Asparaginase/glutaminase family signature 28 39 1.4E-20 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 IX88_09280 9a1b124a8100c593fee1c62936b0ec16 355 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 109 119 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 IX88_09280 9a1b124a8100c593fee1c62936b0ec16 355 Pfam PF00710 Asparaginase, N-terminal 27 218 2.6E-51 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 IX88_09280 9a1b124a8100c593fee1c62936b0ec16 355 PIRSF PIRSF500176 24 355 7.3E-84 T 11-10-2018 IX88_09280 9a1b124a8100c593fee1c62936b0ec16 355 SMART SM00870 27 349 1.2E-124 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 IX88_09280 9a1b124a8100c593fee1c62936b0ec16 355 SUPERFAMILY SSF53774 26 354 8.5E-93 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 IX88_09280 9a1b124a8100c593fee1c62936b0ec16 355 Gene3D G3DSA:3.40.50.1170 25 240 4.3E-87 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 IX88_09280 9a1b124a8100c593fee1c62936b0ec16 355 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 27 355 9.0E-114 T 11-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 IX88_09280 9a1b124a8100c593fee1c62936b0ec16 355 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 30 38 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 IX88_09280 9a1b124a8100c593fee1c62936b0ec16 355 Gene3D G3DSA:3.40.50.40 241 355 3.9E-34 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 IX88_12875 d27dfa52403789dc03d7b88fdc9850fd 527 SUPERFAMILY SSF52540 342 519 6.62E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_12875 d27dfa52403789dc03d7b88fdc9850fd 527 Pfam PF00005 ABC transporter 22 173 2.2E-16 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_12875 d27dfa52403789dc03d7b88fdc9850fd 527 Gene3D G3DSA:3.40.50.300 2 272 1.8E-41 T 11-10-2018 IX88_12875 d27dfa52403789dc03d7b88fdc9850fd 527 SUPERFAMILY SSF52540 8 226 3.33E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_12875 d27dfa52403789dc03d7b88fdc9850fd 527 Gene3D G3DSA:3.40.50.300 302 526 3.6E-31 T 11-10-2018 IX88_12875 d27dfa52403789dc03d7b88fdc9850fd 527 SMART SM00382 30 216 0.55 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_12875 d27dfa52403789dc03d7b88fdc9850fd 527 SMART SM00382 363 526 0.17 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_12875 d27dfa52403789dc03d7b88fdc9850fd 527 Pfam PF00005 ABC transporter 356 483 5.8E-12 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_01340 7ea8dda969777ca6bfeb99fa8da769d4 235 PIRSF PIRSF015601 1 235 3.4E-45 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 IX88_01340 7ea8dda969777ca6bfeb99fa8da769d4 235 SUPERFAMILY SSF75217 73 233 2.88E-34 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases IX88_01340 7ea8dda969777ca6bfeb99fa8da769d4 235 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 9 230 2.7E-31 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 IX88_01340 7ea8dda969777ca6bfeb99fa8da769d4 235 Pfam PF04452 RNA methyltransferase 21 233 3.4E-44 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 IX88_01340 7ea8dda969777ca6bfeb99fa8da769d4 235 Gene3D G3DSA:3.40.1280.10 3 234 4.6E-30 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IX88_14395 adc24f9980a7e55eecbc387368fbf941 452 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 3 443 37.62 T 11-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 IX88_14395 adc24f9980a7e55eecbc387368fbf941 452 Pfam PF00375 Sodium:dicarboxylate symporter family 10 416 2.9E-110 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 IX88_14395 adc24f9980a7e55eecbc387368fbf941 452 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 51 66 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site IX88_14395 adc24f9980a7e55eecbc387368fbf941 452 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 310 333 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site IX88_14395 adc24f9980a7e55eecbc387368fbf941 452 Gene3D G3DSA:1.10.3860.10 1 434 1.7E-122 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IX88_14395 adc24f9980a7e55eecbc387368fbf941 452 SUPERFAMILY SSF118215 10 416 1.03E-119 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IX88_14395 adc24f9980a7e55eecbc387368fbf941 452 PRINTS PR00173 Glutamate-aspartate symporter signature 89 114 2.0E-27 T 11-10-2018 IX88_14395 adc24f9980a7e55eecbc387368fbf941 452 PRINTS PR00173 Glutamate-aspartate symporter signature 207 226 2.0E-27 T 11-10-2018 IX88_14395 adc24f9980a7e55eecbc387368fbf941 452 PRINTS PR00173 Glutamate-aspartate symporter signature 307 333 2.0E-27 T 11-10-2018 IX88_14395 adc24f9980a7e55eecbc387368fbf941 452 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 2.0E-27 T 11-10-2018 IX88_14395 adc24f9980a7e55eecbc387368fbf941 452 PRINTS PR00173 Glutamate-aspartate symporter signature 160 182 2.0E-27 T 11-10-2018 IX88_14395 adc24f9980a7e55eecbc387368fbf941 452 PRINTS PR00173 Glutamate-aspartate symporter signature 342 361 2.0E-27 T 11-10-2018 IX88_11920 4699dad655f7faadcb7f872c32536434 952 Gene3D G3DSA:3.40.930.10 1 141 5.0E-36 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 IX88_11920 4699dad655f7faadcb7f872c32536434 952 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 284 361 9.3E-14 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like IX88_11920 4699dad655f7faadcb7f872c32536434 952 PRINTS PR00107 Phosphocarrier protein signature 294 310 1.5E-8 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like IX88_11920 4699dad655f7faadcb7f872c32536434 952 PRINTS PR00107 Phosphocarrier protein signature 335 352 1.5E-8 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like IX88_11920 4699dad655f7faadcb7f872c32536434 952 PRINTS PR00107 Phosphocarrier protein signature 320 335 1.5E-8 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like IX88_11920 4699dad655f7faadcb7f872c32536434 952 Gene3D G3DSA:3.50.30.10 402 622 1.2E-57 T 11-10-2018 IX88_11920 4699dad655f7faadcb7f872c32536434 952 SUPERFAMILY SSF52009 516 635 2.62E-29 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 IX88_11920 4699dad655f7faadcb7f872c32536434 952 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 294 301 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site IX88_11920 4699dad655f7faadcb7f872c32536434 952 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain IX88_11920 4699dad655f7faadcb7f872c32536434 952 Gene3D G3DSA:3.30.1340.10 283 370 2.4E-18 T 11-10-2018 IPR035895 HPr-like superfamily IX88_11920 4699dad655f7faadcb7f872c32536434 952 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 830 845 8.0E-19 T 11-10-2018 IX88_11920 4699dad655f7faadcb7f872c32536434 952 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 682 701 8.0E-19 T 11-10-2018 IX88_11920 4699dad655f7faadcb7f872c32536434 952 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 883 895 8.0E-19 T 11-10-2018 IX88_11920 4699dad655f7faadcb7f872c32536434 952 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 847 862 8.0E-19 T 11-10-2018 IX88_11920 4699dad655f7faadcb7f872c32536434 952 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 573 584 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 IX88_11920 4699dad655f7faadcb7f872c32536434 952 SUPERFAMILY SSF55594 283 370 5.63E-17 T 11-10-2018 IPR035895 HPr-like superfamily IX88_11920 4699dad655f7faadcb7f872c32536434 952 Pfam PF00391 PEP-utilising enzyme, mobile domain 542 614 1.1E-18 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 IX88_11920 4699dad655f7faadcb7f872c32536434 952 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 830 848 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 IX88_11920 4699dad655f7faadcb7f872c32536434 952 SUPERFAMILY SSF55804 147 274 2.44E-10 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 IX88_11920 4699dad655f7faadcb7f872c32536434 952 Pfam PF05524 PEP-utilising enzyme, N-terminal 401 517 2.8E-22 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 IX88_11920 4699dad655f7faadcb7f872c32536434 952 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 640 923 3.5E-104 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 IX88_11920 4699dad655f7faadcb7f872c32536434 952 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 402 947 1.1E-151 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 IX88_11920 4699dad655f7faadcb7f872c32536434 952 SUPERFAMILY SSF55804 4 139 3.84E-34 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 IX88_11920 4699dad655f7faadcb7f872c32536434 952 SUPERFAMILY SSF51621 642 932 3.66E-100 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 IX88_11920 4699dad655f7faadcb7f872c32536434 952 Gene3D G3DSA:3.20.20.60 623 952 8.8E-115 T 11-10-2018 IX88_11920 4699dad655f7faadcb7f872c32536434 952 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 139 9.1E-27 T 11-10-2018 IPR002178 PTS EIIA type-2 domain IX88_11920 4699dad655f7faadcb7f872c32536434 952 SUPERFAMILY SSF47831 419 534 2.22E-26 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 IX88_11920 4699dad655f7faadcb7f872c32536434 952 Pfam PF00381 PTS HPr component phosphorylation site 284 360 2.2E-16 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like IX88_11920 4699dad655f7faadcb7f872c32536434 952 Gene3D G3DSA:1.10.274.10 419 536 1.2E-57 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 IX88_03810 19ba775855a2db252dc22c1cc26c4900 121 Pfam PF13411 MerR HTH family regulatory protein 1 66 1.4E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_03810 19ba775855a2db252dc22c1cc26c4900 121 SMART SM00422 1 69 2.4E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_03810 19ba775855a2db252dc22c1cc26c4900 121 Gene3D G3DSA:1.10.1660.10 1 121 7.4E-27 T 11-10-2018 IX88_03810 19ba775855a2db252dc22c1cc26c4900 121 SUPERFAMILY SSF46955 1 110 6.23E-24 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily IX88_11760 d985e25c5f4312fc3242982f6e6cd7e9 216 SUPERFAMILY SSF51735 3 133 7.28E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_11760 d985e25c5f4312fc3242982f6e6cd7e9 216 Gene3D G3DSA:3.30.70.1450 138 213 3.2E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 IX88_11760 d985e25c5f4312fc3242982f6e6cd7e9 216 Gene3D G3DSA:3.40.50.720 2 137 2.2E-35 T 11-10-2018 IX88_11760 d985e25c5f4312fc3242982f6e6cd7e9 216 Pfam PF02254 TrkA-N domain 4 119 7.7E-28 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 IX88_11760 d985e25c5f4312fc3242982f6e6cd7e9 216 SUPERFAMILY SSF116726 131 214 1.01E-8 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 IX88_14605 dbc095092f00b69109bda7bc72543d0c 291 Gene3D G3DSA:1.10.8.10 1 56 5.4E-25 T 11-10-2018 IX88_14605 dbc095092f00b69109bda7bc72543d0c 291 Gene3D G3DSA:1.10.286.20 188 234 3.3E-37 T 11-10-2018 IX88_14605 dbc095092f00b69109bda7bc72543d0c 291 Gene3D G3DSA:3.30.479.20 153 268 3.3E-37 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 IX88_14605 dbc095092f00b69109bda7bc72543d0c 291 Pfam PF00889 Elongation factor TS 71 269 1.1E-61 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 IX88_14605 dbc095092f00b69109bda7bc72543d0c 291 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 286 1.6E-95 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IX88_14605 dbc095092f00b69109bda7bc72543d0c 291 Gene3D G3DSA:3.30.479.20 57 148 1.2E-26 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 IX88_14605 dbc095092f00b69109bda7bc72543d0c 291 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IX88_14605 dbc095092f00b69109bda7bc72543d0c 291 SUPERFAMILY SSF54713 57 269 9.81E-44 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 IX88_14605 dbc095092f00b69109bda7bc72543d0c 291 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IX88_14605 dbc095092f00b69109bda7bc72543d0c 291 Hamap MF_00050 Elongation factor Ts [tsf]. 1 288 73.753 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 IX88_14605 dbc095092f00b69109bda7bc72543d0c 291 SUPERFAMILY SSF46934 4 54 4.76E-18 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 IX88_02405 5b18f4a5d8f612455b3449c919f030e7 180 SUPERFAMILY SSF52218 1 174 4.81E-34 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_02405 5b18f4a5d8f612455b3449c919f030e7 180 Pfam PF03358 NADPH-dependent FMN reductase 1 139 1.7E-31 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 IX88_02405 5b18f4a5d8f612455b3449c919f030e7 180 Gene3D G3DSA:3.40.50.360 1 176 1.7E-40 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_02475 9ee15ae20c267e59806bbb0994666220 106 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 50 104 1.0E-12 T 11-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB IX88_02475 9ee15ae20c267e59806bbb0994666220 106 Gene3D G3DSA:3.10.450.160 28 106 2.8E-13 T 11-10-2018 IX88_02475 9ee15ae20c267e59806bbb0994666220 106 Pfam PF11776 Nickel/cobalt transporter regulator 53 102 1.3E-13 T 11-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB IX88_05300 10d9a6c0c2989a73d6b2a3fbbacacb43 125 Gene3D G3DSA:1.20.1280.230 19 125 9.6E-61 T 11-10-2018 IX88_05300 10d9a6c0c2989a73d6b2a3fbbacacb43 125 Pfam PF16309 Domian of unknown function (DUF4951) 43 125 6.4E-48 T 11-10-2018 IPR032538 Protein of unknown function DUF4951 IX88_10720 a3a78448cd8ddb24c2f8f59e07bf3e2d 261 PIRSF PIRSF004846 3 257 6.1E-74 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 IX88_10720 a3a78448cd8ddb24c2f8f59e07bf3e2d 261 Gene3D G3DSA:3.40.190.10 110 219 4.0E-80 T 11-10-2018 IX88_10720 a3a78448cd8ddb24c2f8f59e07bf3e2d 261 Gene3D G3DSA:3.40.190.10 33 253 4.0E-80 T 11-10-2018 IX88_10720 a3a78448cd8ddb24c2f8f59e07bf3e2d 261 Pfam PF13531 Bacterial extracellular solute-binding protein 32 253 1.3E-46 T 11-10-2018 IX88_10720 a3a78448cd8ddb24c2f8f59e07bf3e2d 261 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 37 252 1.7E-64 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 IX88_10720 a3a78448cd8ddb24c2f8f59e07bf3e2d 261 SUPERFAMILY SSF53850 30 253 1.16E-68 T 11-10-2018 IX88_11970 64901f09399bf0cc5b6f93099aa9b1f2 392 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 187 197 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site IX88_11970 64901f09399bf0cc5b6f93099aa9b1f2 392 PRINTS PR00723 Subtilisin serine protease family (S8) signature 183 196 2.4E-18 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related IX88_11970 64901f09399bf0cc5b6f93099aa9b1f2 392 PRINTS PR00723 Subtilisin serine protease family (S8) signature 145 164 2.4E-18 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related IX88_11970 64901f09399bf0cc5b6f93099aa9b1f2 392 PRINTS PR00723 Subtilisin serine protease family (S8) signature 336 352 2.4E-18 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related IX88_11970 64901f09399bf0cc5b6f93099aa9b1f2 392 Pfam PF05922 Peptidase inhibitor I9 43 113 3.4E-5 T 11-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 IX88_11970 64901f09399bf0cc5b6f93099aa9b1f2 392 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 337 347 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site IX88_11970 64901f09399bf0cc5b6f93099aa9b1f2 392 Gene3D G3DSA:3.40.50.200 116 392 2.0E-92 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 IX88_11970 64901f09399bf0cc5b6f93099aa9b1f2 392 SUPERFAMILY SSF52743 122 375 9.95E-76 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 IX88_11970 64901f09399bf0cc5b6f93099aa9b1f2 392 Gene3D G3DSA:3.30.70.80 34 112 4.6E-13 T 11-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 IX88_11970 64901f09399bf0cc5b6f93099aa9b1f2 392 Pfam PF00082 Subtilase family 146 381 6.0E-35 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 IX88_11970 64901f09399bf0cc5b6f93099aa9b1f2 392 SUPERFAMILY SSF54897 39 113 3.63E-8 T 11-10-2018 IX88_11970 64901f09399bf0cc5b6f93099aa9b1f2 392 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 150 161 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site IX88_02870 3786d3021d9b5ebe1b6d5ffb489ecc45 597 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 383 7.3E-11 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_02870 3786d3021d9b5ebe1b6d5ffb489ecc45 597 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 223 4.0E-10 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_02870 3786d3021d9b5ebe1b6d5ffb489ecc45 597 Gene3D G3DSA:1.20.140.10 239 389 1.3E-17 T 11-10-2018 IX88_02870 3786d3021d9b5ebe1b6d5ffb489ecc45 597 SUPERFAMILY SSF56645 15 246 7.2E-32 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_02870 3786d3021d9b5ebe1b6d5ffb489ecc45 597 Gene3D G3DSA:2.40.110.10 126 238 1.6E-21 T 11-10-2018 IX88_02870 3786d3021d9b5ebe1b6d5ffb489ecc45 597 Gene3D G3DSA:1.10.540.10 28 123 5.9E-6 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_02870 3786d3021d9b5ebe1b6d5ffb489ecc45 597 SUPERFAMILY SSF47203 236 384 1.55E-17 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_12160 a98dfe70699c641e570a5791621eb8bd 464 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 IX88_12160 a98dfe70699c641e570a5791621eb8bd 464 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 6.7E-35 T 11-10-2018 IPR000362 Fumarate lyase family IX88_12160 a98dfe70699c641e570a5791621eb8bd 464 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 6.7E-35 T 11-10-2018 IPR000362 Fumarate lyase family IX88_12160 a98dfe70699c641e570a5791621eb8bd 464 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 6.7E-35 T 11-10-2018 IPR000362 Fumarate lyase family IX88_12160 a98dfe70699c641e570a5791621eb8bd 464 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 6.7E-35 T 11-10-2018 IPR000362 Fumarate lyase family IX88_12160 a98dfe70699c641e570a5791621eb8bd 464 Pfam PF00206 Lyase 11 341 1.0E-114 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal IX88_12160 a98dfe70699c641e570a5791621eb8bd 464 Gene3D G3DSA:1.20.200.10 138 405 2.1E-118 T 11-10-2018 IX88_12160 a98dfe70699c641e570a5791621eb8bd 464 SUPERFAMILY SSF48557 3 461 2.51E-160 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 IX88_12160 a98dfe70699c641e570a5791621eb8bd 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 91.185 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IX88_12160 a98dfe70699c641e570a5791621eb8bd 464 Pfam PF10415 Fumarase C C-terminus 407 459 4.1E-25 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IX88_12160 a98dfe70699c641e570a5791621eb8bd 464 Gene3D G3DSA:1.10.40.30 406 464 8.5E-27 T 11-10-2018 IX88_12160 a98dfe70699c641e570a5791621eb8bd 464 PRINTS PR00145 Argininosuccinate lyase family signature 316 332 8.6E-5 T 11-10-2018 IX88_12160 a98dfe70699c641e570a5791621eb8bd 464 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 8.6E-5 T 11-10-2018 IX88_12160 a98dfe70699c641e570a5791621eb8bd 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 460 5.3E-230 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IX88_12160 a98dfe70699c641e570a5791621eb8bd 464 Gene3D G3DSA:1.10.275.10 4 137 6.4E-59 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal IX88_06045 364ed96ea91628ac06f2cf931555e3ce 198 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 24 186 1.1E-33 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 IX88_06045 364ed96ea91628ac06f2cf931555e3ce 198 SUPERFAMILY SSF46785 97 172 1.28E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_06045 364ed96ea91628ac06f2cf931555e3ce 198 Gene3D G3DSA:1.10.10.10 14 94 2.5E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_06045 364ed96ea91628ac06f2cf931555e3ce 198 Pfam PF04079 Segregation and condensation complex subunit ScpB 23 181 9.9E-49 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 IX88_06045 364ed96ea91628ac06f2cf931555e3ce 198 SUPERFAMILY SSF46785 18 94 9.29E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_06045 364ed96ea91628ac06f2cf931555e3ce 198 PIRSF PIRSF019345 5 198 1.6E-53 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 IX88_06045 364ed96ea91628ac06f2cf931555e3ce 198 Gene3D G3DSA:1.10.10.10 95 190 2.3E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_11295 e5e12f379b5ddb8bb77dc1395339297a 308 SUPERFAMILY SSF53850 90 300 6.21E-35 T 11-10-2018 IX88_11295 e5e12f379b5ddb8bb77dc1395339297a 308 Gene3D G3DSA:3.40.190.10 93 294 1.3E-49 T 11-10-2018 IX88_11295 e5e12f379b5ddb8bb77dc1395339297a 308 SUPERFAMILY SSF46785 4 86 1.63E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_11295 e5e12f379b5ddb8bb77dc1395339297a 308 Gene3D G3DSA:3.40.190.10 166 268 1.3E-49 T 11-10-2018 IX88_11295 e5e12f379b5ddb8bb77dc1395339297a 308 Pfam PF03466 LysR substrate binding domain 89 297 3.2E-29 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_11295 e5e12f379b5ddb8bb77dc1395339297a 308 Gene3D G3DSA:1.10.10.10 3 90 1.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_11295 e5e12f379b5ddb8bb77dc1395339297a 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.6E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_05710 bfa9eabbc0c785a590cd7dac4b587f9f 944 Gene3D G3DSA:3.20.70.20 219 882 8.1E-249 T 11-10-2018 IX88_05710 bfa9eabbc0c785a590cd7dac4b587f9f 944 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 278 869 9.6E-122 T 11-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 IX88_05710 bfa9eabbc0c785a590cd7dac4b587f9f 944 Pfam PF03477 ATP cone domain 123 201 3.9E-5 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 IX88_05710 bfa9eabbc0c785a590cd7dac4b587f9f 944 Pfam PF03477 ATP cone domain 11 108 3.6E-18 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 IX88_05710 bfa9eabbc0c785a590cd7dac4b587f9f 944 SUPERFAMILY SSF48168 128 336 1.02E-57 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IX88_05710 bfa9eabbc0c785a590cd7dac4b587f9f 944 Pfam PF02867 Ribonucleotide reductase, barrel domain 338 872 3.3E-185 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IX88_05710 bfa9eabbc0c785a590cd7dac4b587f9f 944 SUPERFAMILY SSF51998 337 874 3.66E-183 T 11-10-2018 IX88_05710 bfa9eabbc0c785a590cd7dac4b587f9f 944 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 716 738 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IX88_05710 bfa9eabbc0c785a590cd7dac4b587f9f 944 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 261 332 1.6E-19 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IX88_05710 bfa9eabbc0c785a590cd7dac4b587f9f 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 584 607 2.7E-47 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IX88_05710 bfa9eabbc0c785a590cd7dac4b587f9f 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 622 644 2.7E-47 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IX88_05710 bfa9eabbc0c785a590cd7dac4b587f9f 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 547 558 2.7E-47 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IX88_05710 bfa9eabbc0c785a590cd7dac4b587f9f 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 650 673 2.7E-47 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IX88_05710 bfa9eabbc0c785a590cd7dac4b587f9f 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 413 432 2.7E-47 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IX88_05710 bfa9eabbc0c785a590cd7dac4b587f9f 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 727 754 2.7E-47 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IX88_05710 bfa9eabbc0c785a590cd7dac4b587f9f 944 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 264 874 1.0E-213 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IX88_09555 f4a0a060a779c4886879f6f75fe81a26 329 PIRSF PIRSF001619 1 318 2.9E-140 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 IX88_09555 f4a0a060a779c4886879f6f75fe81a26 329 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 1.0E-18 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 IX88_09555 f4a0a060a779c4886879f6f75fe81a26 329 SMART SM00729 43 252 3.3E-43 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 IX88_09555 f4a0a060a779c4886879f6f75fe81a26 329 SUPERFAMILY SSF102114 5 310 4.71E-92 T 11-10-2018 IX88_09555 f4a0a060a779c4886879f6f75fe81a26 329 SMART SM00876 220 312 1.4E-42 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 IX88_09555 f4a0a060a779c4886879f6f75fe81a26 329 Gene3D G3DSA:3.20.20.70 4 314 5.2E-132 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_09555 f4a0a060a779c4886879f6f75fe81a26 329 Hamap MF_01694 Biotin synthase [bioB]. 5 313 43.159 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 IX88_09555 f4a0a060a779c4886879f6f75fe81a26 329 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 1.0E-124 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 IX88_09555 f4a0a060a779c4886879f6f75fe81a26 329 Pfam PF04055 Radical SAM superfamily 50 206 9.5E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 IX88_08890 8f0ef7b40d961469a8726d0173f7a80e 712 Gene3D G3DSA:2.40.180.10 2 457 2.2E-214 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 IX88_08890 8f0ef7b40d961469a8726d0173f7a80e 712 Gene3D G3DSA:3.40.50.880 561 712 4.1E-30 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_08890 8f0ef7b40d961469a8726d0173f7a80e 712 SUPERFAMILY SSF52317 559 708 1.26E-11 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_08890 8f0ef7b40d961469a8726d0173f7a80e 712 PIRSF PIRSF038927 4 710 0.0 T 11-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 IX88_08890 8f0ef7b40d961469a8726d0173f7a80e 712 Pfam PF00199 Catalase 45 430 4.2E-178 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 IX88_08890 8f0ef7b40d961469a8726d0173f7a80e 712 Gene3D G3DSA:1.20.1370.20 460 560 8.7E-34 T 11-10-2018 IX88_08890 8f0ef7b40d961469a8726d0173f7a80e 712 PRINTS PR00067 Catalase signature 58 81 3.6E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 IX88_08890 8f0ef7b40d961469a8726d0173f7a80e 712 PRINTS PR00067 Catalase signature 330 357 3.6E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 IX88_08890 8f0ef7b40d961469a8726d0173f7a80e 712 PRINTS PR00067 Catalase signature 161 179 3.6E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 IX88_08890 8f0ef7b40d961469a8726d0173f7a80e 712 PRINTS PR00067 Catalase signature 121 139 3.6E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 IX88_08890 8f0ef7b40d961469a8726d0173f7a80e 712 PRINTS PR00067 Catalase signature 362 388 3.6E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 IX88_08890 8f0ef7b40d961469a8726d0173f7a80e 712 PRINTS PR00067 Catalase signature 142 159 3.6E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 IX88_08890 8f0ef7b40d961469a8726d0173f7a80e 712 SUPERFAMILY SSF56634 22 545 9.42E-223 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 IX88_08890 8f0ef7b40d961469a8726d0173f7a80e 712 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 375 383 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 IX88_08890 8f0ef7b40d961469a8726d0173f7a80e 712 Pfam PF06628 Catalase-related immune-responsive 462 527 8.7E-19 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 IX88_08890 8f0ef7b40d961469a8726d0173f7a80e 712 SMART SM01060 45 433 2.9E-270 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1084 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 SUPERFAMILY SSF52540 8 346 6.02E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 SUPERFAMILY SSF52540 784 992 1.66E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 SUPERFAMILY SSF52540 354 467 2.44E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 Gene3D G3DSA:2.30.30.840 485 543 2.1E-229 T 11-10-2018 IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 SMART SM01058 481 578 2.2E-43 T 11-10-2018 IPR003711 CarD-like/TRCF domain IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 Pfam PF03461 TRCF domain 1011 1101 4.3E-27 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 Pfam PF00271 Helicase conserved C-terminal domain 807 911 1.4E-16 T 11-10-2018 IPR001650 Helicase, C-terminal IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 SUPERFAMILY SSF143517 997 1148 1.18E-42 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 Gene3D G3DSA:3.90.1150.50 1006 1152 3.2E-44 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 Pfam PF00270 DEAD/DEAH box helicase 609 764 5.8E-20 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 SUPERFAMILY SSF141259 473 550 6.93E-22 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 Gene3D G3DSA:3.40.50.300 480 991 2.1E-229 T 11-10-2018 IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 Gene3D G3DSA:3.40.50.300 544 783 2.1E-229 T 11-10-2018 IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 Gene3D G3DSA:3.40.50.11180 27 338 3.1E-100 T 11-10-2018 IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 SMART SM00490 828 912 2.5E-17 T 11-10-2018 IPR001650 Helicase, C-terminal IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 Gene3D G3DSA:3.40.50.11140 360 455 2.5E-9 T 11-10-2018 IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 39 1149 27.192 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 SMART SM00982 1010 1110 8.3E-46 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 SUPERFAMILY SSF52540 525 785 7.83E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 Gene3D G3DSA:3.30.2060.10 128 213 3.1E-100 T 11-10-2018 IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 Pfam PF02559 CarD-like/TRCF domain 482 575 1.7E-21 T 11-10-2018 IPR003711 CarD-like/TRCF domain IX88_10035 8cb7e6c7c0b1ca8c0f92f494769cff00 1153 SMART SM00487 602 797 6.4E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain IX88_00430 9c458ee40e171600f2c4cf913e107319 343 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 9.8E-149 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 IX88_00430 9c458ee40e171600f2c4cf913e107319 343 SUPERFAMILY SSF55729 1 337 2.52E-129 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_00430 9c458ee40e171600f2c4cf913e107319 343 Gene3D G3DSA:2.40.40.20 273 338 1.0E-13 T 11-10-2018 IX88_00430 9c458ee40e171600f2c4cf913e107319 343 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 335 2.9E-139 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 IX88_00430 9c458ee40e171600f2c4cf913e107319 343 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 337 4.2E-157 T 11-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 IX88_00430 9c458ee40e171600f2c4cf913e107319 343 Gene3D G3DSA:3.40.630.30 1 272 7.1E-115 T 11-10-2018 IX88_14330 98d7899bdda727ef333311c8906adf77 121 Pfam PF04241 Protein of unknown function (DUF423) 16 102 1.8E-26 T 11-10-2018 IPR006696 Protein of unknown function DUF423 IX88_08585 37f4cc61d719e6d032c932e93b92d5bc 295 SMART SM00342 205 288 2.6E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_08585 37f4cc61d719e6d032c932e93b92d5bc 295 SUPERFAMILY SSF46689 241 289 8.96E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_08585 37f4cc61d719e6d032c932e93b92d5bc 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 IX88_08585 37f4cc61d719e6d032c932e93b92d5bc 295 Gene3D G3DSA:1.10.10.60 184 293 1.5E-25 T 11-10-2018 IX88_08585 37f4cc61d719e6d032c932e93b92d5bc 295 Pfam PF12852 Cupin 92 172 8.9E-14 T 11-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain IX88_08585 37f4cc61d719e6d032c932e93b92d5bc 295 Pfam PF12833 Helix-turn-helix domain 211 289 1.8E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_08585 37f4cc61d719e6d032c932e93b92d5bc 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 272 1.4E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_08585 37f4cc61d719e6d032c932e93b92d5bc 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 288 1.4E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_08585 37f4cc61d719e6d032c932e93b92d5bc 295 SUPERFAMILY SSF46689 189 239 1.91E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_18190 444e434304b290f275f674717a7a2439 805 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 79 714 5.4E-191 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 IX88_18190 444e434304b290f275f674717a7a2439 805 SUPERFAMILY SSF50249 139 240 4.71E-9 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_18190 444e434304b290f275f674717a7a2439 805 Gene3D G3DSA:2.40.50.140 70 149 4.6E-8 T 11-10-2018 IX88_18190 444e434304b290f275f674717a7a2439 805 SUPERFAMILY SSF50249 230 631 3.83E-140 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_18190 444e434304b290f275f674717a7a2439 805 Pfam PF00575 S1 RNA binding domain 632 712 5.4E-11 T 11-10-2018 IPR003029 S1 domain GO:0003676 IX88_18190 444e434304b290f275f674717a7a2439 805 Pfam PF08206 Ribonuclease B OB domain 90 142 4.8E-7 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain IX88_18190 444e434304b290f275f674717a7a2439 805 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site IX88_18190 444e434304b290f275f674717a7a2439 805 SUPERFAMILY SSF50249 632 713 2.33E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_18190 444e434304b290f275f674717a7a2439 805 SUPERFAMILY SSF50249 73 148 1.72E-10 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_18190 444e434304b290f275f674717a7a2439 805 TIGRFAM TIGR02063 RNase_R: ribonuclease R 22 715 5.2E-231 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 IX88_18190 444e434304b290f275f674717a7a2439 805 Gene3D G3DSA:2.40.50.140 634 741 2.2E-21 T 11-10-2018 IX88_18190 444e434304b290f275f674717a7a2439 805 SMART SM00316 631 714 5.2E-12 T 11-10-2018 IPR022967 RNA-binding domain, S1 IX88_18190 444e434304b290f275f674717a7a2439 805 Hamap MF_01895 Ribonuclease R [rnr]. 41 714 50.131 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 IX88_18190 444e434304b290f275f674717a7a2439 805 Pfam PF00773 RNB domain 262 587 6.2E-106 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 IX88_18190 444e434304b290f275f674717a7a2439 805 SMART SM00955 262 588 2.3E-171 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 IX88_13575 8fc7e9e9db5d1b239650a2518cf2db98 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 422 6.3E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_13575 8fc7e9e9db5d1b239650a2518cf2db98 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 280 7.9E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_13575 8fc7e9e9db5d1b239650a2518cf2db98 442 SMART SM00388 222 284 3.7E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_13575 8fc7e9e9db5d1b239650a2518cf2db98 442 Gene3D G3DSA:3.30.565.10 288 429 5.7E-15 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_13575 8fc7e9e9db5d1b239650a2518cf2db98 442 SUPERFAMILY SSF55874 293 418 1.13E-15 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_13575 8fc7e9e9db5d1b239650a2518cf2db98 442 SUPERFAMILY SSF47384 205 280 3.53E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IX88_13575 8fc7e9e9db5d1b239650a2518cf2db98 442 Gene3D G3DSA:1.10.287.130 167 286 3.4E-19 T 11-10-2018 IX88_09225 bebd0abff20d0da2b11eb147be38a0db 109 SMART SM00418 6 88 3.9E-27 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 IX88_09225 bebd0abff20d0da2b11eb147be38a0db 109 SUPERFAMILY SSF46785 2 89 3.47E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_09225 bebd0abff20d0da2b11eb147be38a0db 109 Pfam PF01022 Bacterial regulatory protein, arsR family 13 57 6.4E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 IX88_09225 bebd0abff20d0da2b11eb147be38a0db 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 4.6E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 IX88_09225 bebd0abff20d0da2b11eb147be38a0db 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 4.6E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 IX88_09225 bebd0abff20d0da2b11eb147be38a0db 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 4.6E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 IX88_09225 bebd0abff20d0da2b11eb147be38a0db 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 4.6E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 IX88_09225 bebd0abff20d0da2b11eb147be38a0db 109 Gene3D G3DSA:1.10.10.10 1 90 3.2E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_08395 c43756459b9dc99e267be84e4949ee73 155 Pfam PF01037 Lrp/AsnC ligand binding domain 72 145 2.7E-11 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IX88_08395 c43756459b9dc99e267be84e4949ee73 155 Gene3D G3DSA:1.10.10.10 1 59 3.0E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_08395 c43756459b9dc99e267be84e4949ee73 155 SUPERFAMILY SSF54909 68 149 5.09E-11 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel IX88_08395 c43756459b9dc99e267be84e4949ee73 155 SUPERFAMILY SSF46785 5 65 8.44E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_08395 c43756459b9dc99e267be84e4949ee73 155 Gene3D G3DSA:3.30.70.920 60 154 3.8E-12 T 11-10-2018 IX88_08395 c43756459b9dc99e267be84e4949ee73 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 7.6E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_08395 c43756459b9dc99e267be84e4949ee73 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 7.6E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_08395 c43756459b9dc99e267be84e4949ee73 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 7.6E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_08395 c43756459b9dc99e267be84e4949ee73 155 SMART SM00344 6 115 1.2E-25 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 IX88_08395 c43756459b9dc99e267be84e4949ee73 155 Pfam PF13404 AsnC-type helix-turn-helix domain 6 47 1.0E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_17830 a4046de7e6825b2355fe708127b065be 298 Pfam PF12146 Serine aminopeptidase, S33 30 259 1.3E-12 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 IX88_17830 a4046de7e6825b2355fe708127b065be 298 Gene3D G3DSA:1.10.10.800 141 223 2.0E-46 T 11-10-2018 IX88_17830 a4046de7e6825b2355fe708127b065be 298 Gene3D G3DSA:3.40.50.1820 15 276 2.0E-46 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_17830 a4046de7e6825b2355fe708127b065be 298 SUPERFAMILY SSF53474 4 296 1.34E-46 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_03225 23b0bf599ce3455b141ca265f412f837 117 Gene3D G3DSA:3.30.1330.40 1 117 2.2E-39 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 IX88_03225 23b0bf599ce3455b141ca265f412f837 117 SUPERFAMILY SSF55298 10 117 1.73E-32 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 IX88_03225 23b0bf599ce3455b141ca265f412f837 117 Pfam PF01042 Endoribonuclease L-PSP 4 115 1.9E-27 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 IX88_07950 f6a7f8d5a44cbc4c9a8447879c2b2997 426 Gene3D G3DSA:3.30.2130.10 258 423 7.4E-61 T 11-10-2018 IX88_07950 f6a7f8d5a44cbc4c9a8447879c2b2997 426 SUPERFAMILY SSF55021 340 416 2.41E-25 T 11-10-2018 IX88_07950 f6a7f8d5a44cbc4c9a8447879c2b2997 426 Pfam PF00696 Amino acid kinase family 3 229 3.1E-51 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 IX88_07950 f6a7f8d5a44cbc4c9a8447879c2b2997 426 SUPERFAMILY SSF53633 4 254 1.44E-76 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily IX88_07950 f6a7f8d5a44cbc4c9a8447879c2b2997 426 Pfam PF01842 ACT domain 279 336 1.7E-11 T 11-10-2018 IPR002912 ACT domain IX88_07950 f6a7f8d5a44cbc4c9a8447879c2b2997 426 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 59 414 1.1E-112 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 IX88_07950 f6a7f8d5a44cbc4c9a8447879c2b2997 426 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 414 5.4E-131 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 IX88_07950 f6a7f8d5a44cbc4c9a8447879c2b2997 426 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 IX88_07950 f6a7f8d5a44cbc4c9a8447879c2b2997 426 Pfam PF13840 ACT domain 348 410 2.7E-18 T 11-10-2018 IPR027795 CASTOR, ACT domain IX88_07950 f6a7f8d5a44cbc4c9a8447879c2b2997 426 Gene3D G3DSA:3.40.1160.10 1 257 1.5E-87 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily IX88_07950 f6a7f8d5a44cbc4c9a8447879c2b2997 426 SUPERFAMILY SSF55021 260 338 1.55E-17 T 11-10-2018 IX88_07950 f6a7f8d5a44cbc4c9a8447879c2b2997 426 PIRSF PIRSF000726 1 62 1.3E-20 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 IX88_07950 f6a7f8d5a44cbc4c9a8447879c2b2997 426 PIRSF PIRSF000726 55 422 4.1E-139 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 IX88_12665 6457d8e7383a9e579631fae147756404 373 Pfam PF13479 AAA domain 18 202 5.5E-30 T 11-10-2018 IX88_06795 9a7e35928aa2462af99aa38d1ff60dbe 546 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 323 1.0E-25 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 IX88_06795 9a7e35928aa2462af99aa38d1ff60dbe 546 Gene3D G3DSA:3.40.50.970 352 535 1.1E-45 T 11-10-2018 IX88_06795 9a7e35928aa2462af99aa38d1ff60dbe 546 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 IX88_06795 9a7e35928aa2462af99aa38d1ff60dbe 546 SUPERFAMILY SSF52518 2 178 4.71E-40 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_06795 9a7e35928aa2462af99aa38d1ff60dbe 546 Gene3D G3DSA:3.40.50.970 1 179 4.6E-44 T 11-10-2018 IX88_06795 9a7e35928aa2462af99aa38d1ff60dbe 546 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 175 5.8E-44 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 IX88_06795 9a7e35928aa2462af99aa38d1ff60dbe 546 Gene3D G3DSA:3.40.50.1220 186 351 3.4E-32 T 11-10-2018 IX88_06795 9a7e35928aa2462af99aa38d1ff60dbe 546 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 526 1.3E-30 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 IX88_06795 9a7e35928aa2462af99aa38d1ff60dbe 546 SUPERFAMILY SSF52467 159 348 9.0E-33 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily IX88_06795 9a7e35928aa2462af99aa38d1ff60dbe 546 SUPERFAMILY SSF52518 362 531 1.09E-44 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_13480 9beb2be0ff7814b76031033622824e1f 89 PIRSF PIRSF002097 1 87 5.6E-35 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 IX88_13480 9beb2be0ff7814b76031033622824e1f 89 Pfam PF02954 Bacterial regulatory protein, Fis family 44 83 3.2E-15 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 IX88_13480 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 50 67 1.3E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 IX88_13480 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 67 87 1.3E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 IX88_13480 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 46 58 2.0E-9 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 IX88_13480 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 31 46 2.0E-9 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 IX88_13480 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 15 31 2.0E-9 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 IX88_13480 9beb2be0ff7814b76031033622824e1f 89 Gene3D G3DSA:1.10.10.60 2 86 7.0E-27 T 11-10-2018 IX88_13480 9beb2be0ff7814b76031033622824e1f 89 SUPERFAMILY SSF46689 15 86 6.27E-22 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_05520 52fd11e77396841da1deb5520216e4bd 354 Gene3D G3DSA:3.40.50.10800 124 346 2.7E-97 T 11-10-2018 IX88_05520 52fd11e77396841da1deb5520216e4bd 354 Pfam PF02445 Quinolinate synthetase A protein 41 347 9.7E-105 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 IX88_05520 52fd11e77396841da1deb5520216e4bd 354 Gene3D G3DSA:3.40.50.10800 41 329 2.7E-97 T 11-10-2018 IX88_05520 52fd11e77396841da1deb5520216e4bd 354 Gene3D G3DSA:3.40.50.10800 209 304 2.7E-97 T 11-10-2018 IX88_05520 52fd11e77396841da1deb5520216e4bd 354 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 354 67.95 T 11-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 IX88_05520 52fd11e77396841da1deb5520216e4bd 354 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 40 349 1.3E-114 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 IX88_05520 52fd11e77396841da1deb5520216e4bd 354 SUPERFAMILY SSF142754 39 348 3.4E-109 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 IX88_00440 1b4da119527cecb7818a03996afec466 423 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 41 168 1.0E-55 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 IX88_00440 1b4da119527cecb7818a03996afec466 423 Gene3D G3DSA:3.40.50.720 187 422 7.0E-84 T 11-10-2018 IX88_00440 1b4da119527cecb7818a03996afec466 423 SMART SM00839 189 419 2.4E-88 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 IX88_00440 1b4da119527cecb7818a03996afec466 423 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 106 119 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 IX88_00440 1b4da119527cecb7818a03996afec466 423 SUPERFAMILY SSF51735 187 422 5.74E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_00440 1b4da119527cecb7818a03996afec466 423 PIRSF PIRSF000185 8 422 5.2E-160 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 IX88_00440 1b4da119527cecb7818a03996afec466 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 220 240 2.8E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 IX88_00440 1b4da119527cecb7818a03996afec466 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 98 112 2.8E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 IX88_00440 1b4da119527cecb7818a03996afec466 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 178 200 2.8E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 IX88_00440 1b4da119527cecb7818a03996afec466 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 347 358 2.8E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 IX88_00440 1b4da119527cecb7818a03996afec466 423 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 187 419 2.0E-71 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 IX88_00440 1b4da119527cecb7818a03996afec466 423 SUPERFAMILY SSF53223 8 189 2.65E-70 T 11-10-2018 IX88_00440 1b4da119527cecb7818a03996afec466 423 Gene3D G3DSA:3.40.50.10860 43 186 2.6E-64 T 11-10-2018 IX88_05570 a76ec80871bac8c055fc46cb497a8e5d 440 Gene3D G3DSA:1.20.1250.20 28 227 1.8E-39 T 11-10-2018 IX88_05570 a76ec80871bac8c055fc46cb497a8e5d 440 Gene3D G3DSA:1.20.1250.20 242 435 1.1E-32 T 11-10-2018 IX88_05570 a76ec80871bac8c055fc46cb497a8e5d 440 Pfam PF07690 Major Facilitator Superfamily 39 301 3.1E-38 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_05570 a76ec80871bac8c055fc46cb497a8e5d 440 SUPERFAMILY SSF103473 29 432 1.11E-81 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_15500 3d4c1139c9838f6180928642c235d559 338 Pfam PF01594 AI-2E family transporter 15 329 1.0E-12 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like IX88_01700 5629b1ef409b6365a0e1a157aeb56908 452 SUPERFAMILY SSF55874 279 445 2.1E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_01700 5629b1ef409b6365a0e1a157aeb56908 452 SUPERFAMILY SSF47384 213 291 2.35E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IX88_01700 5629b1ef409b6365a0e1a157aeb56908 452 Pfam PF11808 Domain of unknown function (DUF3329) 27 106 2.8E-14 T 11-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 IX88_01700 5629b1ef409b6365a0e1a157aeb56908 452 SUPERFAMILY SSF55785 125 169 1.06E-5 T 11-10-2018 IPR035965 PAS domain superfamily IX88_01700 5629b1ef409b6365a0e1a157aeb56908 452 Pfam PF13188 PAS domain 119 164 7.5E-6 T 11-10-2018 IPR000014 PAS domain IX88_01700 5629b1ef409b6365a0e1a157aeb56908 452 SMART SM00387 335 447 6.7E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_01700 5629b1ef409b6365a0e1a157aeb56908 452 Gene3D G3DSA:1.10.287.130 223 290 1.6E-22 T 11-10-2018 IX88_01700 5629b1ef409b6365a0e1a157aeb56908 452 SMART SM00388 224 290 3.1E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_01700 5629b1ef409b6365a0e1a157aeb56908 452 Gene3D G3DSA:3.30.450.20 107 222 3.2E-8 T 11-10-2018 IX88_01700 5629b1ef409b6365a0e1a157aeb56908 452 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 116 443 6.2E-124 T 11-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 IX88_01700 5629b1ef409b6365a0e1a157aeb56908 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 446 1.6E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_01700 5629b1ef409b6365a0e1a157aeb56908 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 1.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_01700 5629b1ef409b6365a0e1a157aeb56908 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 1.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_01700 5629b1ef409b6365a0e1a157aeb56908 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 1.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_01700 5629b1ef409b6365a0e1a157aeb56908 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 1.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_01700 5629b1ef409b6365a0e1a157aeb56908 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 289 4.9E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_01700 5629b1ef409b6365a0e1a157aeb56908 452 Gene3D G3DSA:3.30.565.10 292 449 1.3E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_15695 68d46adfcbd3e90410d848c49cd77f3f 406 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 IX88_15695 68d46adfcbd3e90410d848c49cd77f3f 406 SUPERFAMILY SSF82051 3 158 4.32E-57 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily IX88_15695 68d46adfcbd3e90410d848c49cd77f3f 406 Gene3D G3DSA:3.40.50.300 159 340 1.3E-48 T 11-10-2018 IX88_15695 68d46adfcbd3e90410d848c49cd77f3f 406 PIRSF PIRSF002401 1 381 5.3E-137 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type IX88_15695 68d46adfcbd3e90410d848c49cd77f3f 406 Pfam PF01926 50S ribosome-binding GTPase 161 284 3.8E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_15695 68d46adfcbd3e90410d848c49cd77f3f 406 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 3.2E-144 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 IX88_15695 68d46adfcbd3e90410d848c49cd77f3f 406 Pfam PF01018 GTP1/OBG 4 158 1.1E-59 T 11-10-2018 IPR006169 GTP1/OBG domain IX88_15695 68d46adfcbd3e90410d848c49cd77f3f 406 SUPERFAMILY SSF52540 151 337 2.96E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_15695 68d46adfcbd3e90410d848c49cd77f3f 406 Gene3D G3DSA:2.70.210.12 1 158 2.3E-60 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily IX88_15695 68d46adfcbd3e90410d848c49cd77f3f 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.2E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_15695 68d46adfcbd3e90410d848c49cd77f3f 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.2E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_15695 68d46adfcbd3e90410d848c49cd77f3f 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.2E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_15695 68d46adfcbd3e90410d848c49cd77f3f 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.2E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_15695 68d46adfcbd3e90410d848c49cd77f3f 406 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.618 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 IX88_02315 a15d023d812bbf83002886e116bdd49c 430 Pfam PF01471 Putative peptidoglycan binding domain 365 419 1.0E-10 T 11-10-2018 IPR002477 Peptidoglycan binding-like IX88_02315 a15d023d812bbf83002886e116bdd49c 430 Pfam PF13406 Transglycosylase SLT domain 49 344 1.7E-103 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 IX88_02315 a15d023d812bbf83002886e116bdd49c 430 SUPERFAMILY SSF53955 46 351 3.19E-95 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily IX88_02315 a15d023d812bbf83002886e116bdd49c 430 Gene3D G3DSA:1.10.8.350 64 224 3.6E-80 T 11-10-2018 IX88_02315 a15d023d812bbf83002886e116bdd49c 430 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 48 347 6.7E-109 T 11-10-2018 IPR011970 Lytic murein transglycosylase IX88_02315 a15d023d812bbf83002886e116bdd49c 430 Gene3D G3DSA:1.10.530.10 91 343 3.6E-80 T 11-10-2018 IX88_02315 a15d023d812bbf83002886e116bdd49c 430 SUPERFAMILY SSF47090 351 422 1.43E-16 T 11-10-2018 IPR036365 PGBD-like superfamily IX88_02315 a15d023d812bbf83002886e116bdd49c 430 Gene3D G3DSA:1.10.101.10 351 424 8.0E-10 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 IX88_11415 392173f608fcb799f485f04769298036 223 Pfam PF01144 Coenzyme A transferase 8 218 1.6E-73 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 IX88_11415 392173f608fcb799f485f04769298036 223 Gene3D G3DSA:3.40.1080.10 1 218 8.5E-80 T 11-10-2018 IX88_11415 392173f608fcb799f485f04769298036 223 SUPERFAMILY SSF100950 2 221 9.57E-80 T 11-10-2018 IPR037171 NagB/RpiA transferase-like IX88_11415 392173f608fcb799f485f04769298036 223 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 11-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 IX88_11415 392173f608fcb799f485f04769298036 223 SMART SM00882 6 219 2.1E-81 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 IX88_11415 392173f608fcb799f485f04769298036 223 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 9.3E-122 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 IX88_11455 6c43f5aafa2e90cbedd3bd38c73b54ad 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 283 299 3.2E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_11455 6c43f5aafa2e90cbedd3bd38c73b54ad 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 283 3.2E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_11455 6c43f5aafa2e90cbedd3bd38c73b54ad 304 Gene3D G3DSA:1.10.10.60 192 303 6.1E-29 T 11-10-2018 IX88_11455 6c43f5aafa2e90cbedd3bd38c73b54ad 304 SUPERFAMILY SSF46689 250 302 4.93E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_11455 6c43f5aafa2e90cbedd3bd38c73b54ad 304 Pfam PF12833 Helix-turn-helix domain 220 300 6.1E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_11455 6c43f5aafa2e90cbedd3bd38c73b54ad 304 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 295 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 IX88_11455 6c43f5aafa2e90cbedd3bd38c73b54ad 304 Pfam PF14525 AraC-binding-like domain 12 129 1.6E-6 T 11-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like IX88_11455 6c43f5aafa2e90cbedd3bd38c73b54ad 304 SMART SM00342 214 299 3.1E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_13710 1a8440be75a8f5a225081717ec3916ab 178 Pfam PF05229 Spore Coat Protein U domain 26 175 3.0E-23 T 11-10-2018 IPR007893 Spore coat protein U IX88_13710 1a8440be75a8f5a225081717ec3916ab 178 SMART SM00972 117 175 6.6E-14 T 11-10-2018 IPR007893 Spore coat protein U IX88_04135 f352c766913ec33ab7ed3cd22b94fd92 742 Pfam PF00271 Helicase conserved C-terminal domain 533 599 1.2E-4 T 11-10-2018 IPR001650 Helicase, C-terminal IX88_04135 f352c766913ec33ab7ed3cd22b94fd92 742 Hamap MF_00983 Probable primosomal protein N' [priA]. 16 741 24.439 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 IX88_04135 f352c766913ec33ab7ed3cd22b94fd92 742 Gene3D G3DSA:1.10.8.630 13 125 3.5E-31 T 11-10-2018 IX88_04135 f352c766913ec33ab7ed3cd22b94fd92 742 SMART SM00487 205 401 1.2E-20 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain IX88_04135 f352c766913ec33ab7ed3cd22b94fd92 742 SMART SM00490 503 600 6.8E-6 T 11-10-2018 IPR001650 Helicase, C-terminal IX88_04135 f352c766913ec33ab7ed3cd22b94fd92 742 TIGRFAM TIGR00595 priA: primosomal protein N' 231 738 6.7E-182 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 IX88_04135 f352c766913ec33ab7ed3cd22b94fd92 742 Gene3D G3DSA:3.40.50.300 198 389 6.0E-75 T 11-10-2018 IX88_04135 f352c766913ec33ab7ed3cd22b94fd92 742 SUPERFAMILY SSF52540 225 610 4.39E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04135 f352c766913ec33ab7ed3cd22b94fd92 742 Pfam PF04851 Type III restriction enzyme, res subunit 208 369 8.8E-15 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 IX88_16615 7b1ad846d92c5b9e9ac71fb0183de652 210 SUPERFAMILY SSF51161 65 203 8.18E-39 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily IX88_16615 7b1ad846d92c5b9e9ac71fb0183de652 210 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 IX88_16615 7b1ad846d92c5b9e9ac71fb0183de652 210 Gene3D G3DSA:2.160.10.10 7 210 1.2E-58 T 11-10-2018 IX88_16615 7b1ad846d92c5b9e9ac71fb0183de652 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 1.7E-9 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_04945 1e03c958970ddd9660740f7e7dd0face 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 1.2E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_04945 1e03c958970ddd9660740f7e7dd0face 190 SUPERFAMILY SSF46689 3 78 1.23E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_04945 1e03c958970ddd9660740f7e7dd0face 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.0E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_04945 1e03c958970ddd9660740f7e7dd0face 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.0E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_04945 1e03c958970ddd9660740f7e7dd0face 190 Gene3D G3DSA:1.10.357.10 1 183 3.8E-36 T 11-10-2018 IX88_04945 1e03c958970ddd9660740f7e7dd0face 190 SUPERFAMILY SSF48498 73 157 6.43E-8 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_05490 668e4da61671fb027d3da155e990e0cb 635 Pfam PF07731 Multicopper oxidase 494 607 2.9E-27 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 IX88_05490 668e4da61671fb027d3da155e990e0cb 635 Pfam PF00394 Multicopper oxidase 159 332 1.8E-28 T 11-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 IX88_05490 668e4da61671fb027d3da155e990e0cb 635 Gene3D G3DSA:2.60.40.420 477 613 2.4E-32 T 11-10-2018 IPR008972 Cupredoxin IX88_05490 668e4da61671fb027d3da155e990e0cb 635 ProSitePatterns PS00079 Multicopper oxidases signature 1. 584 604 - T 11-10-2018 IPR033138 Multicopper oxidases, conserved site IX88_05490 668e4da61671fb027d3da155e990e0cb 635 SUPERFAMILY SSF49503 459 606 6.56E-36 T 11-10-2018 IPR008972 Cupredoxin IX88_05490 668e4da61671fb027d3da155e990e0cb 635 SUPERFAMILY SSF49503 16 173 3.09E-35 T 11-10-2018 IPR008972 Cupredoxin IX88_05490 668e4da61671fb027d3da155e990e0cb 635 Pfam PF07732 Multicopper oxidase 32 145 1.0E-34 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 IX88_05490 668e4da61671fb027d3da155e990e0cb 635 Gene3D G3DSA:2.60.40.420 156 358 1.3E-39 T 11-10-2018 IPR008972 Cupredoxin IX88_05490 668e4da61671fb027d3da155e990e0cb 635 Gene3D G3DSA:2.60.40.420 16 144 9.6E-37 T 11-10-2018 IPR008972 Cupredoxin IX88_05490 668e4da61671fb027d3da155e990e0cb 635 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 26 606 2.2E-190 T 11-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 IX88_05490 668e4da61671fb027d3da155e990e0cb 635 SUPERFAMILY SSF49503 156 362 1.57E-45 T 11-10-2018 IPR008972 Cupredoxin IX88_05490 668e4da61671fb027d3da155e990e0cb 635 ProSitePatterns PS00080 Multicopper oxidases signature 2. 589 600 - T 11-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 IX88_10490 bf3510579d7f36db1096516d4cd64b51 423 Gene3D G3DSA:3.40.50.300 110 292 1.9E-61 T 11-10-2018 IX88_10490 bf3510579d7f36db1096516d4cd64b51 423 SUPERFAMILY SSF52540 126 365 3.65E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_10490 bf3510579d7f36db1096516d4cd64b51 423 Pfam PF02954 Bacterial regulatory protein, Fis family 390 418 1.5E-4 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 IX88_10490 bf3510579d7f36db1096516d4cd64b51 423 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 146 159 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IX88_10490 bf3510579d7f36db1096516d4cd64b51 423 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 208 223 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IX88_10490 bf3510579d7f36db1096516d4cd64b51 423 Gene3D G3DSA:1.10.10.60 376 423 6.9E-6 T 11-10-2018 IX88_10490 bf3510579d7f36db1096516d4cd64b51 423 SUPERFAMILY SSF46689 377 423 6.72E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_10490 bf3510579d7f36db1096516d4cd64b51 423 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 335 344 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site IX88_10490 bf3510579d7f36db1096516d4cd64b51 423 SMART SM00382 142 285 1.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_10490 bf3510579d7f36db1096516d4cd64b51 423 Pfam PF00158 Sigma-54 interaction domain 126 288 1.7E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 IX88_10490 bf3510579d7f36db1096516d4cd64b51 423 Gene3D G3DSA:1.10.8.60 293 372 1.0E-21 T 11-10-2018 IX88_08695 b58f095d31f93817027a0fca4cb03e07 281 Gene3D G3DSA:1.10.10.10 26 105 6.4E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_08695 b58f095d31f93817027a0fca4cb03e07 281 SMART SM00346 37 127 2.4E-22 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 IX88_08695 b58f095d31f93817027a0fca4cb03e07 281 Pfam PF09339 IclR helix-turn-helix domain 39 90 4.5E-16 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 IX88_08695 b58f095d31f93817027a0fca4cb03e07 281 Gene3D G3DSA:3.30.450.40 106 281 3.1E-33 T 11-10-2018 IPR029016 GAF-like domain superfamily IX88_08695 b58f095d31f93817027a0fca4cb03e07 281 SUPERFAMILY SSF46785 37 111 2.1E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_08695 b58f095d31f93817027a0fca4cb03e07 281 SUPERFAMILY SSF55781 109 279 9.81E-39 T 11-10-2018 IX88_08695 b58f095d31f93817027a0fca4cb03e07 281 Pfam PF01614 Bacterial transcriptional regulator 155 276 2.0E-13 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal IX88_00680 7fc3b6f5c0fb4378abfd82df42d7a0d2 196 Gene3D G3DSA:1.20.1440.20 19 195 1.6E-64 T 11-10-2018 IPR023353 LemA-like domain superfamily IX88_00680 7fc3b6f5c0fb4378abfd82df42d7a0d2 196 Pfam PF04011 LemA family 14 195 2.8E-67 T 11-10-2018 IPR007156 LemA IX88_00680 7fc3b6f5c0fb4378abfd82df42d7a0d2 196 SUPERFAMILY SSF140478 27 184 1.27E-52 T 11-10-2018 IPR023353 LemA-like domain superfamily IX88_02655 f7df50ce2c5456e57a3e0ede2b4b1871 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 256 9.9E-21 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_02655 f7df50ce2c5456e57a3e0ede2b4b1871 456 Gene3D G3DSA:3.40.120.10 253 371 2.6E-31 T 11-10-2018 IX88_02655 f7df50ce2c5456e57a3e0ede2b4b1871 456 SUPERFAMILY SSF53738 4 175 3.53E-39 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_02655 f7df50ce2c5456e57a3e0ede2b4b1871 456 SUPERFAMILY SSF53738 152 259 2.08E-25 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_02655 f7df50ce2c5456e57a3e0ede2b4b1871 456 SUPERFAMILY SSF55957 370 454 3.31E-19 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_02655 f7df50ce2c5456e57a3e0ede2b4b1871 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 7.6E-29 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_02655 f7df50ce2c5456e57a3e0ede2b4b1871 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 7.6E-29 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_02655 f7df50ce2c5456e57a3e0ede2b4b1871 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 7.6E-29 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_02655 f7df50ce2c5456e57a3e0ede2b4b1871 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 7.6E-29 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_02655 f7df50ce2c5456e57a3e0ede2b4b1871 456 Gene3D G3DSA:3.30.310.50 372 456 1.5E-26 T 11-10-2018 IX88_02655 f7df50ce2c5456e57a3e0ede2b4b1871 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 371 3.3E-22 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_02655 f7df50ce2c5456e57a3e0ede2b4b1871 456 Gene3D G3DSA:3.40.120.10 170 252 1.7E-28 T 11-10-2018 IX88_02655 f7df50ce2c5456e57a3e0ede2b4b1871 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 135 2.3E-34 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_02655 f7df50ce2c5456e57a3e0ede2b4b1871 456 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_02655 f7df50ce2c5456e57a3e0ede2b4b1871 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 447 4.0E-10 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_02655 f7df50ce2c5456e57a3e0ede2b4b1871 456 SUPERFAMILY SSF53738 261 366 2.94E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_02655 f7df50ce2c5456e57a3e0ede2b4b1871 456 Gene3D G3DSA:3.40.120.10 2 148 1.2E-52 T 11-10-2018 IX88_00485 804b02258b4efbb1b3814f350c6bf098 191 SUPERFAMILY SSF49329 46 191 1.15E-44 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 IX88_00485 804b02258b4efbb1b3814f350c6bf098 191 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 179 190 - T 11-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 IX88_00485 804b02258b4efbb1b3814f350c6bf098 191 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 85 95 - T 11-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 IX88_00485 804b02258b4efbb1b3814f350c6bf098 191 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 55 190 6.8E-32 T 11-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 IX88_00485 804b02258b4efbb1b3814f350c6bf098 191 Gene3D G3DSA:2.60.40.200 40 191 5.9E-49 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 IX88_03660 7fbe5791b194f177d8895deb865fa1b6 123 SUPERFAMILY SSF54736 52 123 3.49E-25 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like IX88_03660 7fbe5791b194f177d8895deb865fa1b6 123 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 123 1.1E-31 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_03660 7fbe5791b194f177d8895deb865fa1b6 123 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 123 24.582 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_03660 7fbe5791b194f177d8895deb865fa1b6 123 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 95 9.0E-14 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_03660 7fbe5791b194f177d8895deb865fa1b6 123 Gene3D G3DSA:1.20.5.710 2 52 2.3E-18 T 11-10-2018 IX88_03660 7fbe5791b194f177d8895deb865fa1b6 123 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 51 6.9E-16 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_03660 7fbe5791b194f177d8895deb865fa1b6 123 SUPERFAMILY SSF48300 4 59 2.88E-15 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_03660 7fbe5791b194f177d8895deb865fa1b6 123 Gene3D G3DSA:3.30.1390.10 53 123 1.9E-32 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like IX88_03660 7fbe5791b194f177d8895deb865fa1b6 123 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 1.6E-46 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_08000 97cd46b1afc6a2ec5d1072a07891d93b 141 Gene3D G3DSA:3.40.630.30 1 140 2.2E-28 T 11-10-2018 IX88_08000 97cd46b1afc6a2ec5d1072a07891d93b 141 Pfam PF00583 Acetyltransferase (GNAT) family 32 128 1.3E-12 T 11-10-2018 IPR000182 GNAT domain IX88_08000 97cd46b1afc6a2ec5d1072a07891d93b 141 SUPERFAMILY SSF55729 2 137 3.6E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_01655 74004e95e241acfe8e246d00717dd608 525 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 18 523 1.1E-157 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 IX88_01655 74004e95e241acfe8e246d00717dd608 525 Gene3D G3DSA:3.30.590.20 19 525 1.4E-174 T 11-10-2018 IX88_01655 74004e95e241acfe8e246d00717dd608 525 SUPERFAMILY SSF55931 10 521 1.44E-177 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 IX88_01655 74004e95e241acfe8e246d00717dd608 525 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 525 187.325 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 IX88_01655 74004e95e241acfe8e246d00717dd608 525 Pfam PF04262 Glutamate-cysteine ligase 18 388 1.0E-143 T 11-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 IX88_00355 f09bb344aab4240a9729c01a55d0ccc7 394 SUPERFAMILY SSF103473 2 386 1.31E-61 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_00355 f09bb344aab4240a9729c01a55d0ccc7 394 Gene3D G3DSA:1.20.1250.20 1 388 1.1E-65 T 11-10-2018 IX88_00355 f09bb344aab4240a9729c01a55d0ccc7 394 Pfam PF07690 Major Facilitator Superfamily 228 389 2.2E-10 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_00355 f09bb344aab4240a9729c01a55d0ccc7 394 Pfam PF07690 Major Facilitator Superfamily 9 222 1.7E-36 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_00355 f09bb344aab4240a9729c01a55d0ccc7 394 PRINTS PR01035 Tetracycline resistance protein signature 217 234 4.6E-85 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 IX88_00355 f09bb344aab4240a9729c01a55d0ccc7 394 PRINTS PR01035 Tetracycline resistance protein signature 299 319 4.6E-85 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 IX88_00355 f09bb344aab4240a9729c01a55d0ccc7 394 PRINTS PR01035 Tetracycline resistance protein signature 334 357 4.6E-85 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 IX88_00355 f09bb344aab4240a9729c01a55d0ccc7 394 PRINTS PR01035 Tetracycline resistance protein signature 159 179 4.6E-85 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 IX88_00355 f09bb344aab4240a9729c01a55d0ccc7 394 PRINTS PR01035 Tetracycline resistance protein signature 364 383 4.6E-85 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 IX88_00355 f09bb344aab4240a9729c01a55d0ccc7 394 PRINTS PR01035 Tetracycline resistance protein signature 14 30 4.6E-85 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 IX88_00355 f09bb344aab4240a9729c01a55d0ccc7 394 PRINTS PR01035 Tetracycline resistance protein signature 43 62 4.6E-85 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 IX88_00355 f09bb344aab4240a9729c01a55d0ccc7 394 PRINTS PR01035 Tetracycline resistance protein signature 74 98 4.6E-85 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 IX88_00355 f09bb344aab4240a9729c01a55d0ccc7 394 PRINTS PR01035 Tetracycline resistance protein signature 101 122 4.6E-85 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 IX88_00355 f09bb344aab4240a9729c01a55d0ccc7 394 PRINTS PR01035 Tetracycline resistance protein signature 246 266 4.6E-85 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 IX88_00355 f09bb344aab4240a9729c01a55d0ccc7 394 PRINTS PR01035 Tetracycline resistance protein signature 274 295 4.6E-85 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 IX88_00355 f09bb344aab4240a9729c01a55d0ccc7 394 PRINTS PR01035 Tetracycline resistance protein signature 131 153 4.6E-85 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 IX88_00355 f09bb344aab4240a9729c01a55d0ccc7 394 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_16050 7f14f92be0869315ce6238bcc8feab91 397 Pfam PF01594 AI-2E family transporter 11 343 3.8E-60 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like IX88_04815 3d8b09c97123c28c42183dc6c1831b09 430 Pfam PF13393 Histidyl-tRNA synthetase 9 316 9.0E-45 T 11-10-2018 IX88_04815 3d8b09c97123c28c42183dc6c1831b09 430 Pfam PF03129 Anticodon binding domain 346 426 2.2E-12 T 11-10-2018 IPR004154 Anticodon-binding IX88_04815 3d8b09c97123c28c42183dc6c1831b09 430 Gene3D G3DSA:3.30.930.10 2 327 7.1E-111 T 11-10-2018 IX88_04815 3d8b09c97123c28c42183dc6c1831b09 430 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 430 32.22 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 IX88_04815 3d8b09c97123c28c42183dc6c1831b09 430 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 416 3.3E-148 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 IX88_04815 3d8b09c97123c28c42183dc6c1831b09 430 Gene3D G3DSA:3.40.50.800 329 427 2.6E-27 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily IX88_04815 3d8b09c97123c28c42183dc6c1831b09 430 SUPERFAMILY SSF52954 343 427 2.62E-16 T 11-10-2018 IX88_04815 3d8b09c97123c28c42183dc6c1831b09 430 PIRSF PIRSF001549 1 428 5.5E-125 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 IX88_04815 3d8b09c97123c28c42183dc6c1831b09 430 SUPERFAMILY SSF55681 7 324 6.17E-97 T 11-10-2018 IX88_15490 3d4283988bf7fe5e06d86eb24874e425 356 Pfam PF00175 Oxidoreductase NAD-binding domain 145 246 4.6E-14 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 IX88_15490 3d4283988bf7fe5e06d86eb24874e425 356 Gene3D G3DSA:3.40.50.80 136 264 1.5E-24 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_15490 3d4283988bf7fe5e06d86eb24874e425 356 PRINTS PR00406 Cytochrome B5 reductase signature 232 240 1.1E-5 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 IX88_15490 3d4283988bf7fe5e06d86eb24874e425 356 PRINTS PR00406 Cytochrome B5 reductase signature 144 163 1.1E-5 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 IX88_15490 3d4283988bf7fe5e06d86eb24874e425 356 PRINTS PR00406 Cytochrome B5 reductase signature 122 136 1.1E-5 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 IX88_15490 3d4283988bf7fe5e06d86eb24874e425 356 Gene3D G3DSA:3.10.20.30 265 356 2.3E-13 T 11-10-2018 IPR012675 Beta-grasp domain superfamily IX88_15490 3d4283988bf7fe5e06d86eb24874e425 356 SUPERFAMILY SSF54292 256 356 2.23E-14 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 IX88_15490 3d4283988bf7fe5e06d86eb24874e425 356 SUPERFAMILY SSF52343 130 251 9.82E-25 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_15490 3d4283988bf7fe5e06d86eb24874e425 356 Gene3D G3DSA:2.40.30.10 35 135 1.1E-14 T 11-10-2018 IX88_15490 3d4283988bf7fe5e06d86eb24874e425 356 SUPERFAMILY SSF63380 31 134 2.13E-17 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel IX88_15490 3d4283988bf7fe5e06d86eb24874e425 356 Pfam PF00970 Oxidoreductase FAD-binding domain 43 134 1.0E-8 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 IX88_00685 b4fd90283ac80a98cf00a79eb51dbcab 295 PIRSF PIRSF007580 6 283 8.4E-69 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_00685 b4fd90283ac80a98cf00a79eb51dbcab 295 Pfam PF10118 Predicted metal-dependent hydrolase 23 265 5.1E-76 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_09420 a49bf1684315c6da10fae34a2977dd9d 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 114 7.4E-24 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 IX88_09420 a49bf1684315c6da10fae34a2977dd9d 225 SUPERFAMILY SSF161098 16 205 2.49E-39 T 11-10-2018 IPR035906 MetI-like superfamily IX88_09420 a49bf1684315c6da10fae34a2977dd9d 225 Gene3D G3DSA:1.10.3720.10 7 222 1.5E-48 T 11-10-2018 IPR035906 MetI-like superfamily IX88_09420 a49bf1684315c6da10fae34a2977dd9d 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 221 1.4E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_00090 cdd39288bc66b6d5f471e126870dde86 177 SUPERFAMILY SSF56053 83 177 9.29E-35 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00090 cdd39288bc66b6d5f471e126870dde86 177 PIRSF PIRSF002162 1 177 5.2E-45 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00090 cdd39288bc66b6d5f471e126870dde86 177 Gene3D G3DSA:3.90.930.12 1 82 2.4E-27 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00090 cdd39288bc66b6d5f471e126870dde86 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.3E-72 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 IX88_00090 cdd39288bc66b6d5f471e126870dde86 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00090 cdd39288bc66b6d5f471e126870dde86 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 5.7E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 IX88_00090 cdd39288bc66b6d5f471e126870dde86 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 5.7E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 IX88_00090 cdd39288bc66b6d5f471e126870dde86 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 5.7E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 IX88_00090 cdd39288bc66b6d5f471e126870dde86 177 SUPERFAMILY SSF56053 1 82 8.15E-23 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00090 cdd39288bc66b6d5f471e126870dde86 177 Gene3D G3DSA:3.90.930.12 83 177 3.7E-38 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00090 cdd39288bc66b6d5f471e126870dde86 177 Pfam PF00347 Ribosomal protein L6 90 164 1.3E-17 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00090 cdd39288bc66b6d5f471e126870dde86 177 Pfam PF00347 Ribosomal protein L6 11 82 5.0E-16 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00090 cdd39288bc66b6d5f471e126870dde86 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.363 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 IX88_18305 cdd39288bc66b6d5f471e126870dde86 177 SUPERFAMILY SSF56053 83 177 9.29E-35 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_18305 cdd39288bc66b6d5f471e126870dde86 177 PIRSF PIRSF002162 1 177 5.2E-45 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_18305 cdd39288bc66b6d5f471e126870dde86 177 Gene3D G3DSA:3.90.930.12 1 82 2.4E-27 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_18305 cdd39288bc66b6d5f471e126870dde86 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.3E-72 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 IX88_18305 cdd39288bc66b6d5f471e126870dde86 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_18305 cdd39288bc66b6d5f471e126870dde86 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 5.7E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 IX88_18305 cdd39288bc66b6d5f471e126870dde86 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 5.7E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 IX88_18305 cdd39288bc66b6d5f471e126870dde86 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 5.7E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 IX88_18305 cdd39288bc66b6d5f471e126870dde86 177 SUPERFAMILY SSF56053 1 82 8.15E-23 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_18305 cdd39288bc66b6d5f471e126870dde86 177 Gene3D G3DSA:3.90.930.12 83 177 3.7E-38 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_18305 cdd39288bc66b6d5f471e126870dde86 177 Pfam PF00347 Ribosomal protein L6 90 164 1.3E-17 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_18305 cdd39288bc66b6d5f471e126870dde86 177 Pfam PF00347 Ribosomal protein L6 11 82 5.0E-16 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_18305 cdd39288bc66b6d5f471e126870dde86 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.363 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 IX88_14470 a7048fd2196e88485e67ff277f2478d2 289 Pfam PF02567 Phenazine biosynthesis-like protein 9 285 1.0E-68 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 IX88_14470 a7048fd2196e88485e67ff277f2478d2 289 PIRSF PIRSF016184 1 289 2.5E-83 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 IX88_14470 a7048fd2196e88485e67ff277f2478d2 289 SUPERFAMILY SSF54506 5 288 5.06E-75 T 11-10-2018 IX88_14470 a7048fd2196e88485e67ff277f2478d2 289 Gene3D G3DSA:3.10.310.10 126 281 2.3E-89 T 11-10-2018 IX88_14470 a7048fd2196e88485e67ff277f2478d2 289 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 289 8.2E-76 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 IX88_14470 a7048fd2196e88485e67ff277f2478d2 289 Gene3D G3DSA:3.10.310.10 7 283 2.3E-89 T 11-10-2018 IX88_16055 4dd0a2175073fc9dc015bc27983bc37e 356 SUPERFAMILY SSF56042 176 342 8.07E-63 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily IX88_16055 4dd0a2175073fc9dc015bc27983bc37e 356 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 169 2.6E-15 T 11-10-2018 IPR016188 PurM-like, N-terminal domain IX88_16055 4dd0a2175073fc9dc015bc27983bc37e 356 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 354 46.75 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 IX88_16055 4dd0a2175073fc9dc015bc27983bc37e 356 Gene3D G3DSA:3.30.1330.10 11 175 7.5E-67 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily IX88_16055 4dd0a2175073fc9dc015bc27983bc37e 356 Gene3D G3DSA:3.90.650.10 176 347 2.8E-69 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily IX88_16055 4dd0a2175073fc9dc015bc27983bc37e 356 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 339 2.0E-145 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 IX88_16055 4dd0a2175073fc9dc015bc27983bc37e 356 SUPERFAMILY SSF55326 12 175 9.87E-52 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily IX88_16055 4dd0a2175073fc9dc015bc27983bc37e 356 Pfam PF02769 AIR synthase related protein, C-terminal domain 181 342 8.4E-38 T 11-10-2018 IPR010918 PurM-like, C-terminal domain IX88_06125 aae4fd394dd47e0af71446f5639472df 193 SUPERFAMILY SSF53178 5 191 1.14E-68 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 IX88_06125 aae4fd394dd47e0af71446f5639472df 193 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 188 3.9E-64 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 IX88_06125 aae4fd394dd47e0af71446f5639472df 193 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 IX88_06125 aae4fd394dd47e0af71446f5639472df 193 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 IX88_06125 aae4fd394dd47e0af71446f5639472df 193 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 181 34.883 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 IX88_06125 aae4fd394dd47e0af71446f5639472df 193 Gene3D G3DSA:3.40.50.1470 1 193 1.2E-75 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 IX88_06125 aae4fd394dd47e0af71446f5639472df 193 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 5.2E-54 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 IX88_12770 70021c2ab0c1a1574e9cbbf8ab276e1c 696 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 40 58 2.0E-5 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 IX88_12770 70021c2ab0c1a1574e9cbbf8ab276e1c 696 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 123 141 2.0E-5 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 IX88_12770 70021c2ab0c1a1574e9cbbf8ab276e1c 696 SUPERFAMILY SSF48019 242 365 1.63E-26 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 IX88_12770 70021c2ab0c1a1574e9cbbf8ab276e1c 696 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 2 355 9.7E-134 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 IX88_12770 70021c2ab0c1a1574e9cbbf8ab276e1c 696 Gene3D G3DSA:1.20.272.10 241 361 6.0E-32 T 11-10-2018 IX88_12770 70021c2ab0c1a1574e9cbbf8ab276e1c 696 SMART SM00382 36 177 3.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_12770 70021c2ab0c1a1574e9cbbf8ab276e1c 696 SUPERFAMILY SSF52540 33 222 2.3E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_12770 70021c2ab0c1a1574e9cbbf8ab276e1c 696 Gene3D G3DSA:3.40.50.300 12 176 1.6E-103 T 11-10-2018 IX88_12770 70021c2ab0c1a1574e9cbbf8ab276e1c 696 Gene3D G3DSA:1.10.8.60 7 239 1.6E-103 T 11-10-2018 IX88_12770 70021c2ab0c1a1574e9cbbf8ab276e1c 696 Pfam PF13177 DNA polymerase III, delta subunit 19 177 1.5E-40 T 11-10-2018 IX88_12770 70021c2ab0c1a1574e9cbbf8ab276e1c 696 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 231 365 5.0E-27 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 IX88_13520 9b211f71db3b05bced0ac59600b29931 432 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 307 330 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site IX88_13520 9b211f71db3b05bced0ac59600b29931 432 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 14 431 36.284 T 11-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 IX88_13520 9b211f71db3b05bced0ac59600b29931 432 Pfam PF00375 Sodium:dicarboxylate symporter family 21 413 1.3E-106 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 IX88_13520 9b211f71db3b05bced0ac59600b29931 432 Gene3D G3DSA:1.10.3860.10 8 431 4.2E-119 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IX88_13520 9b211f71db3b05bced0ac59600b29931 432 SUPERFAMILY SSF118215 21 414 1.27E-115 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IX88_13520 9b211f71db3b05bced0ac59600b29931 432 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 48 63 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site IX88_13520 9b211f71db3b05bced0ac59600b29931 432 PRINTS PR00173 Glutamate-aspartate symporter signature 339 358 1.2E-32 T 11-10-2018 IX88_13520 9b211f71db3b05bced0ac59600b29931 432 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 1.2E-32 T 11-10-2018 IX88_13520 9b211f71db3b05bced0ac59600b29931 432 PRINTS PR00173 Glutamate-aspartate symporter signature 304 330 1.2E-32 T 11-10-2018 IX88_13520 9b211f71db3b05bced0ac59600b29931 432 PRINTS PR00173 Glutamate-aspartate symporter signature 157 179 1.2E-32 T 11-10-2018 IX88_13520 9b211f71db3b05bced0ac59600b29931 432 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 1.2E-32 T 11-10-2018 IX88_13520 9b211f71db3b05bced0ac59600b29931 432 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 1.2E-32 T 11-10-2018 IX88_15865 28dbd353cbf8d57fe0e2d22232b46e49 277 Gene3D G3DSA:1.10.3720.10 13 272 1.7E-70 T 11-10-2018 IPR035906 MetI-like superfamily IX88_15865 28dbd353cbf8d57fe0e2d22232b46e49 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 272 2.8E-30 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_15865 28dbd353cbf8d57fe0e2d22232b46e49 277 SUPERFAMILY SSF161098 14 264 1.31E-57 T 11-10-2018 IPR035906 MetI-like superfamily IX88_15865 28dbd353cbf8d57fe0e2d22232b46e49 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 7 270 9.7E-128 T 11-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 IX88_15865 28dbd353cbf8d57fe0e2d22232b46e49 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 5 266 1.7E-98 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 IX88_01275 25a9b2c36a69e02a27dcca12dc5db7d8 230 SUPERFAMILY SSF81324 112 216 8.11E-11 T 11-10-2018 IX88_01275 25a9b2c36a69e02a27dcca12dc5db7d8 230 Pfam PF07885 Ion channel 131 215 1.4E-5 T 11-10-2018 IPR013099 Potassium channel domain IX88_01275 25a9b2c36a69e02a27dcca12dc5db7d8 230 Gene3D G3DSA:1.10.287.70 113 221 3.5E-10 T 11-10-2018 IX88_01690 2bc3c8c121d7b0882dcc3fb0f26c1d2a 223 Gene3D G3DSA:1.10.357.10 80 217 2.3E-10 T 11-10-2018 IX88_01690 2bc3c8c121d7b0882dcc3fb0f26c1d2a 223 SUPERFAMILY SSF48498 104 206 1.78E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_01690 2bc3c8c121d7b0882dcc3fb0f26c1d2a 223 Gene3D G3DSA:1.10.10.60 4 79 3.8E-11 T 11-10-2018 IX88_01690 2bc3c8c121d7b0882dcc3fb0f26c1d2a 223 SUPERFAMILY SSF46689 27 104 2.87E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_03830 9bb85e6204101438240302be995687b7 717 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 495 519 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 IX88_03830 9bb85e6204101438240302be995687b7 717 Gene3D G3DSA:1.10.1040.50 499 711 5.2E-79 T 11-10-2018 IX88_03830 9bb85e6204101438240302be995687b7 717 SUPERFAMILY SSF48179 497 642 4.76E-30 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_03830 9bb85e6204101438240302be995687b7 717 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 496 2.7E-62 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 IX88_03830 9bb85e6204101438240302be995687b7 717 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 717 52.159 T 11-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 IX88_03830 9bb85e6204101438240302be995687b7 717 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 107 127 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 IX88_03830 9bb85e6204101438240302be995687b7 717 SUPERFAMILY SSF52096 6 308 9.03E-66 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_03830 9bb85e6204101438240302be995687b7 717 SUPERFAMILY SSF51735 314 497 5.39E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_03830 9bb85e6204101438240302be995687b7 717 Gene3D G3DSA:3.90.226.10 1 314 4.8E-96 T 11-10-2018 IX88_03830 9bb85e6204101438240302be995687b7 717 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 716 0.0 T 11-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 IX88_03830 9bb85e6204101438240302be995687b7 717 SUPERFAMILY SSF48179 626 716 3.4E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_03830 9bb85e6204101438240302be995687b7 717 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 231 6.7E-37 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 IX88_03830 9bb85e6204101438240302be995687b7 717 Gene3D G3DSA:3.40.50.720 315 498 1.5E-67 T 11-10-2018 IX88_03830 9bb85e6204101438240302be995687b7 717 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 498 593 2.3E-24 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 IX88_11575 c3324e703098a0b44f3f7197313a3d72 809 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 18 808 0.0 T 11-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 IX88_11575 c3324e703098a0b44f3f7197313a3d72 809 SMART SM00564 438 471 76.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IX88_11575 c3324e703098a0b44f3f7197313a3d72 809 SMART SM00564 352 393 0.018 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IX88_11575 c3324e703098a0b44f3f7197313a3d72 809 SMART SM00564 730 763 7.7E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IX88_11575 c3324e703098a0b44f3f7197313a3d72 809 SMART SM00564 663 702 29.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IX88_11575 c3324e703098a0b44f3f7197313a3d72 809 SMART SM00564 224 255 0.0074 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IX88_11575 c3324e703098a0b44f3f7197313a3d72 809 Gene3D G3DSA:2.140.10.10 581 809 5.9E-31 T 11-10-2018 IX88_11575 c3324e703098a0b44f3f7197313a3d72 809 SUPERFAMILY SSF50998 172 793 8.11E-140 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily IX88_11575 c3324e703098a0b44f3f7197313a3d72 809 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 417 438 - T 11-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 IX88_11575 c3324e703098a0b44f3f7197313a3d72 809 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 172 200 - T 11-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 IX88_11575 c3324e703098a0b44f3f7197313a3d72 809 Pfam PF13360 PQQ-like domain 201 390 2.8E-8 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat IX88_11575 c3324e703098a0b44f3f7197313a3d72 809 Pfam PF01011 PQQ enzyme repeat 737 772 1.3E-5 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat IX88_11575 c3324e703098a0b44f3f7197313a3d72 809 Pfam PF01011 PQQ enzyme repeat 451 481 3.1E-9 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat IX88_11575 c3324e703098a0b44f3f7197313a3d72 809 Gene3D G3DSA:2.140.10.10 164 580 2.9E-108 T 11-10-2018 IX88_13805 b133879d8041a13b0c3f9aae93317215 458 Gene3D G3DSA:3.90.1150.10 43 450 2.6E-152 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_13805 b133879d8041a13b0c3f9aae93317215 458 Pfam PF00202 Aminotransferase class-III 45 454 1.1E-85 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_13805 b133879d8041a13b0c3f9aae93317215 458 PIRSF PIRSF000521 193 457 6.3E-20 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_13805 b133879d8041a13b0c3f9aae93317215 458 PIRSF PIRSF000521 46 156 0.011 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_13805 b133879d8041a13b0c3f9aae93317215 458 Gene3D G3DSA:3.40.640.10 79 361 2.6E-152 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_13805 b133879d8041a13b0c3f9aae93317215 458 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 266 303 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_13805 b133879d8041a13b0c3f9aae93317215 458 SUPERFAMILY SSF53383 29 454 1.61E-114 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_07905 65cbef9a057842fff8aac7c0f04e2074 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 5.0E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07905 65cbef9a057842fff8aac7c0f04e2074 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 5.0E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07905 65cbef9a057842fff8aac7c0f04e2074 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 5.0E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07905 65cbef9a057842fff8aac7c0f04e2074 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 8.7E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07905 65cbef9a057842fff8aac7c0f04e2074 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 8.7E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07905 65cbef9a057842fff8aac7c0f04e2074 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 8.7E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07905 65cbef9a057842fff8aac7c0f04e2074 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 8.7E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07905 65cbef9a057842fff8aac7c0f04e2074 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 8.7E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07905 65cbef9a057842fff8aac7c0f04e2074 276 Pfam PF00106 short chain dehydrogenase 16 202 2.0E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07905 65cbef9a057842fff8aac7c0f04e2074 276 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_07905 65cbef9a057842fff8aac7c0f04e2074 276 Gene3D G3DSA:3.40.50.720 9 262 1.9E-65 T 11-10-2018 IX88_07905 65cbef9a057842fff8aac7c0f04e2074 276 SUPERFAMILY SSF51735 13 268 2.39E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_10750 be95d5c832045c94765977e7beceb233 606 Gene3D G3DSA:3.60.21.10 41 404 2.1E-68 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like IX88_10750 be95d5c832045c94765977e7beceb233 606 Gene3D G3DSA:3.90.780.10 408 600 1.0E-49 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 IX88_10750 be95d5c832045c94765977e7beceb233 606 PRINTS PR01607 Apyrase family signature 466 489 9.4E-23 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 IX88_10750 be95d5c832045c94765977e7beceb233 606 PRINTS PR01607 Apyrase family signature 257 274 9.4E-23 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 IX88_10750 be95d5c832045c94765977e7beceb233 606 PRINTS PR01607 Apyrase family signature 50 68 9.4E-23 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 IX88_10750 be95d5c832045c94765977e7beceb233 606 PRINTS PR01607 Apyrase family signature 540 559 9.4E-23 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 IX88_10750 be95d5c832045c94765977e7beceb233 606 PRINTS PR01607 Apyrase family signature 292 315 9.4E-23 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 IX88_10750 be95d5c832045c94765977e7beceb233 606 PRINTS PR01607 Apyrase family signature 324 344 9.4E-23 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 IX88_10750 be95d5c832045c94765977e7beceb233 606 Pfam PF02872 5'-nucleotidase, C-terminal domain 405 567 1.0E-37 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 IX88_10750 be95d5c832045c94765977e7beceb233 606 Pfam PF00149 Calcineurin-like phosphoesterase 53 309 3.3E-12 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 IX88_10750 be95d5c832045c94765977e7beceb233 606 SUPERFAMILY SSF55816 404 605 3.4E-45 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 IX88_10750 be95d5c832045c94765977e7beceb233 606 SUPERFAMILY SSF56300 48 399 4.41E-68 T 11-10-2018 IX88_03350 c33ac30ad07fa616e1bacb30854956d1 430 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 262 268 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 IX88_03350 c33ac30ad07fa616e1bacb30854956d1 430 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 29 348 1.3E-25 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 IX88_03350 c33ac30ad07fa616e1bacb30854956d1 430 SUPERFAMILY SSF53335 23 357 2.95E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_16855 368220d4078d7770fba547be57628055 484 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 463 9.9E-109 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 IX88_16855 368220d4078d7770fba547be57628055 484 Gene3D G3DSA:1.20.1600.10 56 463 4.0E-133 T 11-10-2018 IX88_16855 368220d4078d7770fba547be57628055 484 Pfam PF02321 Outer membrane efflux protein 66 252 3.7E-30 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IX88_16855 368220d4078d7770fba547be57628055 484 Pfam PF02321 Outer membrane efflux protein 281 461 3.3E-32 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IX88_16855 368220d4078d7770fba547be57628055 484 SUPERFAMILY SSF56954 10 464 2.62E-108 T 11-10-2018 IX88_16855 368220d4078d7770fba547be57628055 484 Gene3D G3DSA:2.20.200.10 103 352 4.0E-133 T 11-10-2018 IX88_09325 138e2e532307f0a362bd385571c1cac7 402 Pfam PF02222 ATP-grasp domain 125 303 1.2E-50 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type IX88_09325 138e2e532307f0a362bd385571c1cac7 402 Gene3D G3DSA:3.40.50.20 3 124 1.9E-49 T 11-10-2018 IX88_09325 138e2e532307f0a362bd385571c1cac7 402 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 15 399 4.3E-169 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 IX88_09325 138e2e532307f0a362bd385571c1cac7 402 SUPERFAMILY SSF56059 115 321 1.13E-55 T 11-10-2018 IX88_09325 138e2e532307f0a362bd385571c1cac7 402 Gene3D G3DSA:3.30.470.20 199 402 4.2E-60 T 11-10-2018 IX88_09325 138e2e532307f0a362bd385571c1cac7 402 Gene3D G3DSA:3.30.1490.20 125 198 2.2E-31 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 IX88_09325 138e2e532307f0a362bd385571c1cac7 402 SUPERFAMILY SSF52440 4 114 4.32E-29 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily IX88_09325 138e2e532307f0a362bd385571c1cac7 402 SUPERFAMILY SSF51246 328 398 1.26E-16 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 IX88_09325 138e2e532307f0a362bd385571c1cac7 402 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 9 399 50.56 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 IX88_10265 67658bf3991e4f0d675968ec4217c910 711 Gene3D G3DSA:2.40.170.20 177 711 5.9E-141 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IX88_10265 67658bf3991e4f0d675968ec4217c910 711 Gene3D G3DSA:2.170.130.10 45 176 2.7E-36 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_10265 67658bf3991e4f0d675968ec4217c910 711 SUPERFAMILY SSF56935 25 711 6.11E-117 T 11-10-2018 IX88_10265 67658bf3991e4f0d675968ec4217c910 711 Pfam PF00593 TonB dependent receptor 258 710 6.5E-43 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_10265 67658bf3991e4f0d675968ec4217c910 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 159 1.4E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_10265 67658bf3991e4f0d675968ec4217c910 711 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 707 2.3E-93 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 IX88_03205 b48220659e989beb50e2a760bf7f3da4 134 SUPERFAMILY SSF46955 1 119 2.2E-23 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily IX88_03205 b48220659e989beb50e2a760bf7f3da4 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 1.4E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_03205 b48220659e989beb50e2a760bf7f3da4 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.4E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_03205 b48220659e989beb50e2a760bf7f3da4 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.4E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_03205 b48220659e989beb50e2a760bf7f3da4 134 Pfam PF13411 MerR HTH family regulatory protein 1 67 7.8E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_03205 b48220659e989beb50e2a760bf7f3da4 134 Gene3D G3DSA:1.10.1660.10 1 118 8.0E-24 T 11-10-2018 IX88_03205 b48220659e989beb50e2a760bf7f3da4 134 SMART SM00422 1 69 9.2E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 Gene3D G3DSA:3.40.50.2300 1 124 1.4E-39 T 11-10-2018 IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 SUPERFAMILY SSF52540 141 385 6.83E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 Pfam PF02954 Bacterial regulatory protein, Fis family 439 477 3.9E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 SMART SM00448 4 115 4.5E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 SUPERFAMILY SSF46689 406 480 5.38E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 SMART SM00382 162 305 1.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 Gene3D G3DSA:1.10.8.60 315 386 3.6E-18 T 11-10-2018 IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 SUPERFAMILY SSF52172 3 187 1.31E-43 T 11-10-2018 IPR011006 CheY-like superfamily IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 Pfam PF00072 Response regulator receiver domain 6 115 4.5E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 Gene3D G3DSA:3.40.50.300 127 313 1.5E-67 T 11-10-2018 IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 477 5.8E-226 T 11-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 460 480 4.7E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 443 460 4.7E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 Pfam PF00158 Sigma-54 interaction domain 142 309 1.7E-71 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 IX88_12110 146f36ae5f08a9ee6fe51747bd8959c6 497 Gene3D G3DSA:1.10.10.60 387 480 2.1E-23 T 11-10-2018 IX88_10990 e15c646783b8530878b7c2ca87aacc31 172 SUPERFAMILY SSF55729 11 171 1.66E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_10990 e15c646783b8530878b7c2ca87aacc31 172 Pfam PF13673 Acetyltransferase (GNAT) domain 47 149 4.9E-12 T 11-10-2018 IPR000182 GNAT domain IX88_10990 e15c646783b8530878b7c2ca87aacc31 172 Gene3D G3DSA:3.40.630.30 2 171 1.5E-39 T 11-10-2018 IX88_08645 45aaa14aa4a126a21165480b5edded9b 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 73 1.0E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_08645 45aaa14aa4a126a21165480b5edded9b 240 SMART SM00866 94 233 1.5E-25 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 IX88_08645 45aaa14aa4a126a21165480b5edded9b 240 SUPERFAMILY SSF46785 4 80 3.04E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_08645 45aaa14aa4a126a21165480b5edded9b 240 SMART SM00345 14 73 7.2E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_08645 45aaa14aa4a126a21165480b5edded9b 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.0E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_08645 45aaa14aa4a126a21165480b5edded9b 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.0E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_08645 45aaa14aa4a126a21165480b5edded9b 240 Pfam PF07702 UTRA domain 94 230 1.3E-30 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 IX88_08645 45aaa14aa4a126a21165480b5edded9b 240 SUPERFAMILY SSF64288 61 238 5.02E-38 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IX88_08645 45aaa14aa4a126a21165480b5edded9b 240 Gene3D G3DSA:3.40.1410.10 78 237 9.2E-30 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IX88_08645 45aaa14aa4a126a21165480b5edded9b 240 Gene3D G3DSA:1.10.10.10 8 77 1.6E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_17755 35ffe4aea4e3fcef2605b6d0ec681375 633 Pfam PF13721 SecD export protein N-terminal TM region 2 102 8.7E-35 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain IX88_17755 35ffe4aea4e3fcef2605b6d0ec681375 633 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 122 618 6.7E-134 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 IX88_17755 35ffe4aea4e3fcef2605b6d0ec681375 633 Gene3D G3DSA:1.20.1640.10 468 622 7.7E-13 T 11-10-2018 IX88_17755 35ffe4aea4e3fcef2605b6d0ec681375 633 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 8.4E-8 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_17755 35ffe4aea4e3fcef2605b6d0ec681375 633 PRINTS PR00702 Acriflavin resistance protein family signature 520 544 8.4E-8 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_17755 35ffe4aea4e3fcef2605b6d0ec681375 633 PRINTS PR00702 Acriflavin resistance protein family signature 595 618 8.4E-8 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_17755 35ffe4aea4e3fcef2605b6d0ec681375 633 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 356 611 1.3E-71 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IX88_17755 35ffe4aea4e3fcef2605b6d0ec681375 633 Pfam PF07549 SecD/SecF GG Motif 115 139 2.6E-7 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site IX88_17755 35ffe4aea4e3fcef2605b6d0ec681375 633 Pfam PF02355 Protein export membrane protein 455 621 1.1E-18 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial IX88_17755 35ffe4aea4e3fcef2605b6d0ec681375 633 Gene3D G3DSA:3.30.70.3400 221 455 2.4E-47 T 11-10-2018 IX88_17755 35ffe4aea4e3fcef2605b6d0ec681375 633 Gene3D G3DSA:3.30.1360.200 279 449 2.4E-47 T 11-10-2018 IX88_17755 35ffe4aea4e3fcef2605b6d0ec681375 633 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 632 50.332 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 IX88_17755 35ffe4aea4e3fcef2605b6d0ec681375 633 SUPERFAMILY SSF82866 428 626 3.53E-45 T 11-10-2018 IX88_02265 5e0c51f14452ce396364cc8e6e46cba9 351 SUPERFAMILY SSF55961 146 345 9.34E-27 T 11-10-2018 IX88_02265 5e0c51f14452ce396364cc8e6e46cba9 351 Gene3D G3DSA:2.102.10.10 26 158 4.1E-35 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_02265 5e0c51f14452ce396364cc8e6e46cba9 351 Gene3D G3DSA:3.30.530.90 175 348 1.8E-7 T 11-10-2018 IX88_02265 5e0c51f14452ce396364cc8e6e46cba9 351 Pfam PF00355 Rieske [2Fe-2S] domain 29 113 1.5E-20 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 IX88_02265 5e0c51f14452ce396364cc8e6e46cba9 351 SUPERFAMILY SSF50022 18 136 7.99E-33 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 SUPERFAMILY SSF100934 503 614 7.06E-30 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 Gene3D G3DSA:1.20.1270.10 519 614 9.8E-24 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 SUPERFAMILY SSF53067 19 194 1.37E-54 T 11-10-2018 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 SUPERFAMILY SSF53067 201 376 9.55E-47 T 11-10-2018 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 Gene3D G3DSA:3.90.640.10 239 311 6.5E-113 T 11-10-2018 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 Gene3D G3DSA:3.30.420.40 22 374 6.5E-113 T 11-10-2018 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 Gene3D G3DSA:3.30.420.40 191 361 6.5E-113 T 11-10-2018 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 PRINTS PR00301 70kDa heat shock protein signature 212 222 6.8E-53 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 PRINTS PR00301 70kDa heat shock protein signature 329 345 6.8E-53 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 PRINTS PR00301 70kDa heat shock protein signature 149 169 6.8E-53 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 PRINTS PR00301 70kDa heat shock protein signature 465 481 6.8E-53 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 PRINTS PR00301 70kDa heat shock protein signature 48 60 6.8E-53 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 PRINTS PR00301 70kDa heat shock protein signature 360 380 6.8E-53 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 PRINTS PR00301 70kDa heat shock protein signature 20 33 6.8E-53 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 PRINTS PR00301 70kDa heat shock protein signature 384 403 6.8E-53 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 615 42.668 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 Gene3D G3DSA:2.60.34.10 380 518 6.5E-48 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 SUPERFAMILY SSF100920 383 536 2.09E-48 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 614 1.6E-264 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 Pfam PF00012 Hsp70 protein 21 594 1.3E-174 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_10055 0ccafdd7804b4ea059e4dc139298faa1 619 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 206 219 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 IX88_00095 fe427d9095b3265668d6ce1bcc2f6be1 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00095 fe427d9095b3265668d6ce1bcc2f6be1 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 30.836 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00095 fe427d9095b3265668d6ce1bcc2f6be1 131 Gene3D G3DSA:3.30.1490.10 74 130 1.0E-21 T 11-10-2018 IX88_00095 fe427d9095b3265668d6ce1bcc2f6be1 131 Gene3D G3DSA:3.30.1370.30 2 73 1.7E-29 T 11-10-2018 IX88_00095 fe427d9095b3265668d6ce1bcc2f6be1 131 Pfam PF00410 Ribosomal protein S8 5 130 2.3E-49 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00095 fe427d9095b3265668d6ce1bcc2f6be1 131 SUPERFAMILY SSF56047 2 130 6.54E-47 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_05035 bd660c9a387de7a2bf42dbade4532ecb 308 Gene3D G3DSA:1.10.3730.20 219 308 4.5E-5 T 11-10-2018 IX88_05035 bd660c9a387de7a2bf42dbade4532ecb 308 SUPERFAMILY SSF103481 220 305 6.41E-14 T 11-10-2018 IX88_05035 bd660c9a387de7a2bf42dbade4532ecb 308 SUPERFAMILY SSF103481 47 151 2.48E-14 T 11-10-2018 IX88_05035 bd660c9a387de7a2bf42dbade4532ecb 308 Pfam PF00892 EamA-like transporter family 10 147 7.6E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_05035 bd660c9a387de7a2bf42dbade4532ecb 308 Pfam PF00892 EamA-like transporter family 162 300 1.1E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_11125 4f3adb8e301418618c1025157a4e5142 212 SUPERFAMILY SSF69118 3 189 1.36E-37 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 IX88_11125 4f3adb8e301418618c1025157a4e5142 212 Gene3D G3DSA:1.20.1290.10 1 210 4.7E-48 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 IX88_11125 4f3adb8e301418618c1025157a4e5142 212 Pfam PF02627 Carboxymuconolactone decarboxylase family 3 64 1.2E-7 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 IX88_11125 4f3adb8e301418618c1025157a4e5142 212 Pfam PF02627 Carboxymuconolactone decarboxylase family 121 182 3.0E-6 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 IX88_04630 6e0433c99d5e01bf4fe6dd41898930b7 145 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.6E-18 T 11-10-2018 IX88_04630 6e0433c99d5e01bf4fe6dd41898930b7 145 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.6E-18 T 11-10-2018 IX88_04630 6e0433c99d5e01bf4fe6dd41898930b7 145 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.6E-18 T 11-10-2018 IX88_04630 6e0433c99d5e01bf4fe6dd41898930b7 145 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 120 15.131 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 IX88_04630 6e0433c99d5e01bf4fe6dd41898930b7 145 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 3 79 7.5E-21 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 IX88_04630 6e0433c99d5e01bf4fe6dd41898930b7 145 Pfam PF02416 mttA/Hcf106 family 4 52 1.9E-7 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 IX88_08345 66b00e85c9475d79a5bfc9d135339bee 713 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 8 703 1.6E-259 T 11-10-2018 IPR017750 ATPase, type I secretion system IX88_08345 66b00e85c9475d79a5bfc9d135339bee 713 Pfam PF00664 ABC transporter transmembrane region 161 426 2.3E-32 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 IX88_08345 66b00e85c9475d79a5bfc9d135339bee 713 ProSitePatterns PS00211 ABC transporters family signature. 612 626 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_08345 66b00e85c9475d79a5bfc9d135339bee 713 Pfam PF00005 ABC transporter 495 640 1.9E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_08345 66b00e85c9475d79a5bfc9d135339bee 713 SUPERFAMILY SSF52540 464 701 1.13E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_08345 66b00e85c9475d79a5bfc9d135339bee 713 Gene3D G3DSA:3.90.70.10 4 127 2.0E-11 T 11-10-2018 IX88_08345 66b00e85c9475d79a5bfc9d135339bee 713 Gene3D G3DSA:1.20.1560.10 145 456 2.6E-63 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IX88_08345 66b00e85c9475d79a5bfc9d135339bee 713 SUPERFAMILY SSF90123 146 456 7.59E-63 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IX88_08345 66b00e85c9475d79a5bfc9d135339bee 713 SMART SM00382 500 686 3.5E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_08345 66b00e85c9475d79a5bfc9d135339bee 713 Gene3D G3DSA:3.40.50.300 465 712 2.0E-69 T 11-10-2018 IX88_02925 70db084b4e5c7f7eb2ac4a5e72087cd3 280 SUPERFAMILY SSF52540 3 278 1.01E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_02925 70db084b4e5c7f7eb2ac4a5e72087cd3 280 Gene3D G3DSA:3.40.50.300 2 280 6.8E-60 T 11-10-2018 IX88_02925 70db084b4e5c7f7eb2ac4a5e72087cd3 280 Pfam PF13614 AAA domain 6 206 2.3E-37 T 11-10-2018 IPR025669 AAA domain IX88_08105 27980421d925d8a4c0cbc020d9d6b8d5 1285 Gene3D G3DSA:3.40.50.300 10 235 7.1E-76 T 11-10-2018 IX88_08105 27980421d925d8a4c0cbc020d9d6b8d5 1285 Pfam PF04408 Helicase associated domain (HA2) 466 550 3.2E-16 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 IX88_08105 27980421d925d8a4c0cbc020d9d6b8d5 1285 Pfam PF11898 Domain of unknown function (DUF3418) 709 1280 1.3E-147 T 11-10-2018 IPR024590 RNA helicase HrpA, C-terminal IX88_08105 27980421d925d8a4c0cbc020d9d6b8d5 1285 Pfam PF00270 DEAD/DEAH box helicase 65 216 3.5E-7 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 IX88_08105 27980421d925d8a4c0cbc020d9d6b8d5 1285 Pfam PF00271 Helicase conserved C-terminal domain 288 403 2.3E-11 T 11-10-2018 IPR001650 Helicase, C-terminal IX88_08105 27980421d925d8a4c0cbc020d9d6b8d5 1285 Gene3D G3DSA:1.20.120.1080 447 550 5.2E-18 T 11-10-2018 IX88_08105 27980421d925d8a4c0cbc020d9d6b8d5 1285 Gene3D G3DSA:3.40.50.300 236 421 6.1E-52 T 11-10-2018 IX88_08105 27980421d925d8a4c0cbc020d9d6b8d5 1285 SMART SM00847 464 555 1.2E-33 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 IX88_08105 27980421d925d8a4c0cbc020d9d6b8d5 1285 SMART SM00490 303 404 1.0E-12 T 11-10-2018 IPR001650 Helicase, C-terminal IX88_08105 27980421d925d8a4c0cbc020d9d6b8d5 1285 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 16 1280 0.0 T 11-10-2018 IPR010222 RNA helicase HrpA GO:0004004 IX88_08105 27980421d925d8a4c0cbc020d9d6b8d5 1285 SMART SM00382 75 384 0.0019 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_08105 27980421d925d8a4c0cbc020d9d6b8d5 1285 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 619 694 1.0E-14 T 11-10-2018 IPR011709 Domain of unknown function DUF1605 IX88_08105 27980421d925d8a4c0cbc020d9d6b8d5 1285 SMART SM00487 58 242 4.6E-30 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain IX88_08105 27980421d925d8a4c0cbc020d9d6b8d5 1285 SUPERFAMILY SSF52540 60 563 8.87E-102 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_10400 22d9049139f15d617381ca58e5d11fcb 101 Hamap MF_01866 Protein YcgL [ycgL]. 1 95 24.086 T 11-10-2018 IPR027354 YcgL domain IX88_10400 22d9049139f15d617381ca58e5d11fcb 101 Gene3D G3DSA:3.10.510.20 1 83 1.5E-31 T 11-10-2018 IPR038068 YcgL-like superfamily IX88_10400 22d9049139f15d617381ca58e5d11fcb 101 Pfam PF05166 YcgL domain 3 84 1.5E-29 T 11-10-2018 IPR027354 YcgL domain IX88_10400 22d9049139f15d617381ca58e5d11fcb 101 SUPERFAMILY SSF160191 1 85 2.22E-28 T 11-10-2018 IPR038068 YcgL-like superfamily IX88_10400 22d9049139f15d617381ca58e5d11fcb 101 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 85 2.0E-34 T 11-10-2018 IPR027354 YcgL domain IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 SUPERFAMILY SSF52833 103 195 1.21E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 469 491 7.5E-39 T 11-10-2018 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 7.5E-39 T 11-10-2018 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 7.5E-39 T 11-10-2018 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 7.5E-39 T 11-10-2018 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 7.5E-39 T 11-10-2018 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 Gene3D G3DSA:3.50.50.60 327 450 3.4E-109 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 Gene3D G3DSA:3.50.50.60 212 509 3.4E-109 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 SUPERFAMILY SSF52833 1 100 6.93E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 479 497 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 1.7E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 Pfam PF13192 Thioredoxin domain 119 194 2.0E-8 T 11-10-2018 IPR012336 Thioredoxin-like fold IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 518 7.5E-235 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 504 2.1E-46 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 Gene3D G3DSA:3.40.30.80 1 199 1.5E-63 T 11-10-2018 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 PIRSF PIRSF000238 1 521 9.4E-257 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 IX88_09250 36b2dd35d86cff4cad6966a9669ba059 521 SUPERFAMILY SSF51905 202 514 5.25E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_12100 a142a0e1f34ea4d4b7a3c88f0337d44a 447 Gene3D G3DSA:3.40.50.12160 5 125 1.7E-28 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily IX88_12100 a142a0e1f34ea4d4b7a3c88f0337d44a 447 SUPERFAMILY SSF102114 121 367 8.24E-53 T 11-10-2018 IX88_12100 a142a0e1f34ea4d4b7a3c88f0337d44a 447 Pfam PF04055 Radical SAM superfamily 143 320 9.5E-28 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 IX88_12100 a142a0e1f34ea4d4b7a3c88f0337d44a 447 SMART SM00729 137 362 3.7E-54 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 IX88_12100 a142a0e1f34ea4d4b7a3c88f0337d44a 447 Pfam PF00919 Uncharacterized protein family UPF0004 5 95 9.7E-21 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 IX88_12100 a142a0e1f34ea4d4b7a3c88f0337d44a 447 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 438 4.2E-104 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 IX88_12100 a142a0e1f34ea4d4b7a3c88f0337d44a 447 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 4 441 61.309 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 IX88_12100 a142a0e1f34ea4d4b7a3c88f0337d44a 447 Gene3D G3DSA:2.40.50.140 377 446 1.9E-19 T 11-10-2018 IX88_12100 a142a0e1f34ea4d4b7a3c88f0337d44a 447 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 IX88_12100 a142a0e1f34ea4d4b7a3c88f0337d44a 447 Gene3D G3DSA:3.80.30.20 135 376 4.9E-72 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe IX88_12100 a142a0e1f34ea4d4b7a3c88f0337d44a 447 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 5 438 8.9E-181 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 IX88_02180 909937332b17d165966d9f2367d08565 130 Pfam PF07361 Cytochrome b562 26 130 2.2E-23 T 11-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 IX88_02180 909937332b17d165966d9f2367d08565 130 PIRSF PIRSF000029 2 130 1.1E-28 T 11-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 IX88_02180 909937332b17d165966d9f2367d08565 130 Gene3D G3DSA:1.20.120.10 20 130 7.1E-35 T 11-10-2018 IX88_02180 909937332b17d165966d9f2367d08565 130 SUPERFAMILY SSF47175 25 130 5.18E-24 T 11-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 IX88_03330 22469da245ee0ac210dcf1e38fbd14d0 112 PRINTS PR00340 P-II protein signature 83 103 2.7E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 IX88_03330 22469da245ee0ac210dcf1e38fbd14d0 112 PRINTS PR00340 P-II protein signature 23 41 2.7E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 IX88_03330 22469da245ee0ac210dcf1e38fbd14d0 112 PRINTS PR00340 P-II protein signature 52 75 2.7E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 IX88_03330 22469da245ee0ac210dcf1e38fbd14d0 112 PRINTS PR00340 P-II protein signature 2 17 2.7E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 IX88_03330 22469da245ee0ac210dcf1e38fbd14d0 112 PIRSF PIRSF039144 1 112 6.9E-55 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 IX88_03330 22469da245ee0ac210dcf1e38fbd14d0 112 Gene3D G3DSA:3.30.70.120 1 112 9.6E-47 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal IX88_03330 22469da245ee0ac210dcf1e38fbd14d0 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.2E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 IX88_03330 22469da245ee0ac210dcf1e38fbd14d0 112 SUPERFAMILY SSF54913 1 112 4.45E-46 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta IX88_03330 22469da245ee0ac210dcf1e38fbd14d0 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 IX88_03330 22469da245ee0ac210dcf1e38fbd14d0 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 IX88_03330 22469da245ee0ac210dcf1e38fbd14d0 112 SMART SM00938 4 105 2.5E-66 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 IX88_15600 2e880b773c8a29f712c015a0fbf25ab4 745 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 744 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 IX88_15600 2e880b773c8a29f712c015a0fbf25ab4 745 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 IX88_15600 2e880b773c8a29f712c015a0fbf25ab4 745 SUPERFAMILY SSF53659 5 742 0.0 T 11-10-2018 IX88_15600 2e880b773c8a29f712c015a0fbf25ab4 745 PIRSF PIRSF009407 1 744 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 IX88_15600 2e880b773c8a29f712c015a0fbf25ab4 745 Gene3D G3DSA:3.40.718.10 404 663 3.0E-7 T 11-10-2018 IX88_05350 5ef3f290287a9fe0eca41f3ad98de1b2 482 Gene3D G3DSA:1.10.10.1330 115 252 6.4E-21 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily IX88_05350 5ef3f290287a9fe0eca41f3ad98de1b2 482 Pfam PF04963 Sigma-54 factor, core binding domain 111 308 1.7E-53 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 IX88_05350 5ef3f290287a9fe0eca41f3ad98de1b2 482 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 48 6.8E-14 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 IX88_05350 5ef3f290287a9fe0eca41f3ad98de1b2 482 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 369 388 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 IX88_05350 5ef3f290287a9fe0eca41f3ad98de1b2 482 Gene3D G3DSA:1.10.10.60 422 480 1.2E-25 T 11-10-2018 IX88_05350 5ef3f290287a9fe0eca41f3ad98de1b2 482 PIRSF PIRSF000774 1 481 1.7E-143 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 IX88_05350 5ef3f290287a9fe0eca41f3ad98de1b2 482 PRINTS PR00045 Sigma-54 factor signature 381 393 5.0E-32 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 IX88_05350 5ef3f290287a9fe0eca41f3ad98de1b2 482 PRINTS PR00045 Sigma-54 factor signature 192 209 5.0E-32 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 IX88_05350 5ef3f290287a9fe0eca41f3ad98de1b2 482 PRINTS PR00045 Sigma-54 factor signature 455 473 5.0E-32 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 IX88_05350 5ef3f290287a9fe0eca41f3ad98de1b2 482 PRINTS PR00045 Sigma-54 factor signature 397 408 5.0E-32 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 IX88_05350 5ef3f290287a9fe0eca41f3ad98de1b2 482 Pfam PF04552 Sigma-54, DNA binding domain 323 479 6.0E-69 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding IX88_05350 5ef3f290287a9fe0eca41f3ad98de1b2 482 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 460 467 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 IX88_05350 5ef3f290287a9fe0eca41f3ad98de1b2 482 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 479 6.4E-153 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 143 425 1.3E-131 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 Pfam PF03952 Enolase, N-terminal domain 4 134 1.4E-57 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 Gene3D G3DSA:3.30.390.10 1 127 2.9E-54 T 11-10-2018 IPR029017 Enolase-like, N-terminal IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 SUPERFAMILY SSF51604 142 416 1.3E-125 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 PRINTS PR00148 Enolase signature 367 384 1.4E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 PRINTS PR00148 Enolase signature 164 177 1.4E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 PRINTS PR00148 Enolase signature 37 51 1.4E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 PRINTS PR00148 Enolase signature 338 352 1.4E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 PRINTS PR00148 Enolase signature 107 123 1.4E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 PRINTS PR00148 Enolase signature 315 326 1.4E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 Gene3D G3DSA:3.20.20.120 128 429 9.6E-132 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 SMART SM01192 142 427 1.4E-213 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 SMART SM01193 4 134 1.9E-91 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 426 5.6E-201 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 ProSitePatterns PS00164 Enolase signature. 338 351 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 Hamap MF_00318 Enolase [eno]. 2 415 44.088 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 SUPERFAMILY SSF54826 4 137 1.48E-54 T 11-10-2018 IX88_11655 6934bd1eabbacd9025867a813d640fe4 429 PIRSF PIRSF001400 1 427 1.9E-190 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 IX88_17970 ea08a909459c8bb9c1ae41932719e5fc 278 SUPERFAMILY SSF52096 14 276 2.84E-65 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_17970 ea08a909459c8bb9c1ae41932719e5fc 278 Gene3D G3DSA:3.90.226.10 14 219 4.9E-59 T 11-10-2018 IX88_17970 ea08a909459c8bb9c1ae41932719e5fc 278 Gene3D G3DSA:1.10.12.10 220 278 1.9E-25 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal IX88_17970 ea08a909459c8bb9c1ae41932719e5fc 278 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 276 8.0E-49 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 IX88_06845 081faa087f72c76b3332b78750d858bc 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 3.2E-69 T 11-10-2018 IX88_06845 081faa087f72c76b3332b78750d858bc 249 Gene3D G3DSA:3.40.50.720 2 249 7.8E-80 T 11-10-2018 IX88_06845 081faa087f72c76b3332b78750d858bc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06845 081faa087f72c76b3332b78750d858bc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06845 081faa087f72c76b3332b78750d858bc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06845 081faa087f72c76b3332b78750d858bc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06845 081faa087f72c76b3332b78750d858bc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06845 081faa087f72c76b3332b78750d858bc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06845 081faa087f72c76b3332b78750d858bc 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_06845 081faa087f72c76b3332b78750d858bc 249 SUPERFAMILY SSF51735 4 248 3.81E-83 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_06845 081faa087f72c76b3332b78750d858bc 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 7.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06845 081faa087f72c76b3332b78750d858bc 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06845 081faa087f72c76b3332b78750d858bc 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 7.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06845 081faa087f72c76b3332b78750d858bc 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 0.0028 T 11-10-2018 IX88_17250 9c37a8e78bcb4676d543f7522981b1ef 178 Pfam PF01584 CheW-like domain 33 152 3.7E-24 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 IX88_17250 9c37a8e78bcb4676d543f7522981b1ef 178 Gene3D G3DSA:2.30.30.40 34 153 6.5E-21 T 11-10-2018 IX88_17250 9c37a8e78bcb4676d543f7522981b1ef 178 Gene3D G3DSA:2.40.50.180 50 116 6.5E-21 T 11-10-2018 IX88_17250 9c37a8e78bcb4676d543f7522981b1ef 178 SMART SM00260 27 164 1.5E-5 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 IX88_17250 9c37a8e78bcb4676d543f7522981b1ef 178 SUPERFAMILY SSF50341 27 168 2.49E-28 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 IX88_02785 d17ba78abeb4dc7a4b43f5dea5e279a8 421 Gene3D G3DSA:3.50.50.60 105 403 9.1E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_02785 d17ba78abeb4dc7a4b43f5dea5e279a8 421 Gene3D G3DSA:3.50.50.60 1 78 3.7E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_02785 d17ba78abeb4dc7a4b43f5dea5e279a8 421 Pfam PF01266 FAD dependent oxidoreductase 2 396 1.1E-73 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 IX88_02785 d17ba78abeb4dc7a4b43f5dea5e279a8 421 Gene3D G3DSA:3.30.9.10 134 361 9.1E-54 T 11-10-2018 IX88_02785 d17ba78abeb4dc7a4b43f5dea5e279a8 421 SUPERFAMILY SSF51905 1 416 7.77E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_02785 d17ba78abeb4dc7a4b43f5dea5e279a8 421 SUPERFAMILY SSF54373 270 359 2.88E-17 T 11-10-2018 IX88_02785 d17ba78abeb4dc7a4b43f5dea5e279a8 421 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 48.179 T 11-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 IX88_08985 7267aeca7c0dc5e32b4bb1fb819b37db 653 Gene3D G3DSA:3.40.640.10 281 541 5.1E-166 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_08985 7267aeca7c0dc5e32b4bb1fb819b37db 653 Pfam PF00266 Aminotransferase class-V 270 639 7.0E-145 T 11-10-2018 IPR000192 Aminotransferase class V domain IX88_08985 7267aeca7c0dc5e32b4bb1fb819b37db 653 SUPERFAMILY SSF53383 249 648 2.48E-123 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_08985 7267aeca7c0dc5e32b4bb1fb819b37db 653 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 252 647 4.1E-165 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 IX88_08985 7267aeca7c0dc5e32b4bb1fb819b37db 653 Gene3D G3DSA:3.90.1150.10 253 642 5.1E-166 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_05015 28d90ec49ea8599e2929ceb0ecf46859 535 Pfam PF13175 AAA ATPase domain 65 427 4.0E-24 T 11-10-2018 IX88_05015 28d90ec49ea8599e2929ceb0ecf46859 535 SUPERFAMILY SSF52540 64 442 1.64E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_05015 28d90ec49ea8599e2929ceb0ecf46859 535 Gene3D G3DSA:3.40.50.300 63 445 5.4E-33 T 11-10-2018 IX88_07280 7614a5186a104fc69a83a0eb1e1f28fe 278 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 5 273 4.0E-84 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 IX88_07280 7614a5186a104fc69a83a0eb1e1f28fe 278 Gene3D G3DSA:3.40.1010.10 1 111 1.9E-44 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 IX88_07280 7614a5186a104fc69a83a0eb1e1f28fe 278 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 82 93 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 IX88_07280 7614a5186a104fc69a83a0eb1e1f28fe 278 Gene3D G3DSA:3.30.950.10 112 231 7.1E-40 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 IX88_07280 7614a5186a104fc69a83a0eb1e1f28fe 278 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 204 1.6E-31 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 IX88_07280 7614a5186a104fc69a83a0eb1e1f28fe 278 SUPERFAMILY SSF53790 4 223 4.58E-81 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 IX88_07280 7614a5186a104fc69a83a0eb1e1f28fe 278 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 4 225 36.993 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 IX88_07280 7614a5186a104fc69a83a0eb1e1f28fe 278 PIRSF PIRSF005917 1 278 1.1E-100 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 IX88_14685 16d4f0399c82741fb0ebac5b8c628f1c 756 Gene3D G3DSA:3.40.50.720 162 441 5.5E-82 T 11-10-2018 IX88_14685 16d4f0399c82741fb0ebac5b8c628f1c 756 Pfam PF00390 Malic enzyme, N-terminal domain 21 113 4.3E-20 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 IX88_14685 16d4f0399c82741fb0ebac5b8c628f1c 756 Pfam PF00390 Malic enzyme, N-terminal domain 115 152 2.4E-6 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 IX88_14685 16d4f0399c82741fb0ebac5b8c628f1c 756 SUPERFAMILY SSF53223 11 162 3.09E-52 T 11-10-2018 IX88_14685 16d4f0399c82741fb0ebac5b8c628f1c 756 Gene3D G3DSA:3.40.50.10950 442 748 5.1E-94 T 11-10-2018 IX88_14685 16d4f0399c82741fb0ebac5b8c628f1c 756 SUPERFAMILY SSF51735 164 449 1.97E-86 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_14685 16d4f0399c82741fb0ebac5b8c628f1c 756 SMART SM01274 19 152 2.7E-80 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 IX88_14685 16d4f0399c82741fb0ebac5b8c628f1c 756 Pfam PF03949 Malic enzyme, NAD binding domain 166 357 1.8E-22 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 IX88_14685 16d4f0399c82741fb0ebac5b8c628f1c 756 Gene3D G3DSA:3.40.50.10380 1 161 6.4E-70 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 IX88_14685 16d4f0399c82741fb0ebac5b8c628f1c 756 Pfam PF01515 Phosphate acetyl/butaryl transferase 426 748 4.0E-95 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 IX88_14685 16d4f0399c82741fb0ebac5b8c628f1c 756 SMART SM00919 164 397 2.1E-127 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 IX88_14685 16d4f0399c82741fb0ebac5b8c628f1c 756 PIRSF PIRSF036684 1 756 0.0 T 11-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 IX88_14685 16d4f0399c82741fb0ebac5b8c628f1c 756 SUPERFAMILY SSF53659 426 751 2.67E-89 T 11-10-2018 IX88_14685 16d4f0399c82741fb0ebac5b8c628f1c 756 Gene3D G3DSA:3.40.50.10750 569 724 5.1E-94 T 11-10-2018 IX88_14435 23771116416d544c0d9e72bc5de79eca 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 3.2E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_14435 23771116416d544c0d9e72bc5de79eca 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 3.2E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_14435 23771116416d544c0d9e72bc5de79eca 452 SMART SM00387 339 448 2.0E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_14435 23771116416d544c0d9e72bc5de79eca 452 SUPERFAMILY SSF55874 281 446 9.17E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_14435 23771116416d544c0d9e72bc5de79eca 452 Gene3D G3DSA:3.30.565.10 291 446 6.1E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_14435 23771116416d544c0d9e72bc5de79eca 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 288 1.4E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_14435 23771116416d544c0d9e72bc5de79eca 452 SUPERFAMILY SSF47384 208 290 1.22E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IX88_14435 23771116416d544c0d9e72bc5de79eca 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 446 5.6E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_14435 23771116416d544c0d9e72bc5de79eca 452 Gene3D G3DSA:1.10.287.130 174 290 2.0E-20 T 11-10-2018 IX88_14435 23771116416d544c0d9e72bc5de79eca 452 SMART SM00388 224 290 1.7E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_11885 9126ddcb7827c7f3e99648dae4ba1b64 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.3E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_11885 9126ddcb7827c7f3e99648dae4ba1b64 300 Gene3D G3DSA:3.40.190.10 166 267 1.1E-55 T 11-10-2018 IX88_11885 9126ddcb7827c7f3e99648dae4ba1b64 300 Gene3D G3DSA:3.40.190.10 92 294 1.1E-55 T 11-10-2018 IX88_11885 9126ddcb7827c7f3e99648dae4ba1b64 300 SUPERFAMILY SSF53850 90 299 2.76E-41 T 11-10-2018 IX88_11885 9126ddcb7827c7f3e99648dae4ba1b64 300 Pfam PF03466 LysR substrate binding domain 90 296 6.5E-40 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_11885 9126ddcb7827c7f3e99648dae4ba1b64 300 SUPERFAMILY SSF46785 4 86 5.9E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_11885 9126ddcb7827c7f3e99648dae4ba1b64 300 Gene3D G3DSA:1.10.10.10 3 90 8.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_07965 d3fdad2bec856d124ff1a3323a692571 388 SUPERFAMILY SSF55681 7 319 8.66E-48 T 11-10-2018 IX88_07965 d3fdad2bec856d124ff1a3323a692571 388 Pfam PF13393 Histidyl-tRNA synthetase 12 322 1.2E-98 T 11-10-2018 IX88_07965 d3fdad2bec856d124ff1a3323a692571 388 PIRSF PIRSF001549 322 376 60.0 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 IX88_07965 d3fdad2bec856d124ff1a3323a692571 388 PIRSF PIRSF001549 6 361 7.2E-32 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 IX88_07965 d3fdad2bec856d124ff1a3323a692571 388 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 367 25.998 T 11-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 IX88_07965 d3fdad2bec856d124ff1a3323a692571 388 Gene3D G3DSA:3.30.930.10 4 326 3.6E-57 T 11-10-2018 IX88_03845 898b2e31950316b93139f94391ca82b3 599 Pfam PF14520 Helix-hairpin-helix domain 547 595 9.4E-6 T 11-10-2018 IX88_03845 898b2e31950316b93139f94391ca82b3 599 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 389 531 6.6E-49 T 11-10-2018 IPR001162 UvrC family homology region IX88_03845 898b2e31950316b93139f94391ca82b3 599 Pfam PF02151 UvrB/uvrC motif 208 241 2.1E-8 T 11-10-2018 IPR001943 UVR domain GO:0005515 IX88_03845 898b2e31950316b93139f94391ca82b3 599 SUPERFAMILY SSF46600 193 246 9.68E-13 T 11-10-2018 IPR036876 UVR domain superfamily IX88_03845 898b2e31950316b93139f94391ca82b3 599 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 11 578 1.2E-179 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 IX88_03845 898b2e31950316b93139f94391ca82b3 599 SUPERFAMILY SSF82771 19 102 3.79E-23 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 IX88_03845 898b2e31950316b93139f94391ca82b3 599 Hamap MF_00203 UvrABC system protein C [uvrC]. 6 596 26.829 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 IX88_03845 898b2e31950316b93139f94391ca82b3 599 Gene3D G3DSA:3.30.420.340 375 541 2.0E-52 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily IX88_03845 898b2e31950316b93139f94391ca82b3 599 Gene3D G3DSA:3.40.1440.10 6 104 5.5E-33 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 IX88_03845 898b2e31950316b93139f94391ca82b3 599 SMART SM00465 19 100 2.2E-23 T 11-10-2018 IPR000305 GIY-YIG endonuclease IX88_03845 898b2e31950316b93139f94391ca82b3 599 SMART SM00278 545 564 86.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 IX88_03845 898b2e31950316b93139f94391ca82b3 599 SMART SM00278 577 596 9.5 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 IX88_03845 898b2e31950316b93139f94391ca82b3 599 Gene3D G3DSA:1.10.150.20 544 598 5.0E-19 T 11-10-2018 IX88_03845 898b2e31950316b93139f94391ca82b3 599 SUPERFAMILY SSF47781 510 598 6.35E-23 T 11-10-2018 IPR010994 RuvA domain 2-like IX88_03845 898b2e31950316b93139f94391ca82b3 599 Pfam PF01541 GIY-YIG catalytic domain 21 95 9.2E-9 T 11-10-2018 IPR000305 GIY-YIG endonuclease IX88_03315 ff9c62da19d6d38a10725df6d7c8ffc5 470 Pfam PF00155 Aminotransferase class I and II 136 466 3.5E-27 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 IX88_03315 ff9c62da19d6d38a10725df6d7c8ffc5 470 Gene3D G3DSA:1.10.10.10 6 83 5.6E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_03315 ff9c62da19d6d38a10725df6d7c8ffc5 470 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 82 4.9E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_03315 ff9c62da19d6d38a10725df6d7c8ffc5 470 SMART SM00345 23 82 1.5E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_03315 ff9c62da19d6d38a10725df6d7c8ffc5 470 SUPERFAMILY SSF46785 15 85 7.1E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_03315 ff9c62da19d6d38a10725df6d7c8ffc5 470 Gene3D G3DSA:3.40.640.10 101 465 1.4E-102 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_03315 ff9c62da19d6d38a10725df6d7c8ffc5 470 SUPERFAMILY SSF53383 76 470 3.93E-80 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_03315 ff9c62da19d6d38a10725df6d7c8ffc5 470 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 1.8E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_03315 ff9c62da19d6d38a10725df6d7c8ffc5 470 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 1.8E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_01560 e44ebf2a8f32b56e8d9364c68c99fc14 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 1.5E-20 T 11-10-2018 IX88_01560 e44ebf2a8f32b56e8d9364c68c99fc14 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 326 342 1.5E-20 T 11-10-2018 IX88_01560 e44ebf2a8f32b56e8d9364c68c99fc14 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.5E-20 T 11-10-2018 IX88_01560 e44ebf2a8f32b56e8d9364c68c99fc14 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 1.5E-20 T 11-10-2018 IX88_01560 e44ebf2a8f32b56e8d9364c68c99fc14 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 1.5E-20 T 11-10-2018 IX88_01560 e44ebf2a8f32b56e8d9364c68c99fc14 385 Gene3D G3DSA:3.50.50.60 4 342 2.9E-114 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_01560 e44ebf2a8f32b56e8d9364c68c99fc14 385 SUPERFAMILY SSF51905 1 360 3.4E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_01560 e44ebf2a8f32b56e8d9364c68c99fc14 385 Pfam PF01494 FAD binding domain 2 339 1.1E-29 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 IX88_01560 e44ebf2a8f32b56e8d9364c68c99fc14 385 Gene3D G3DSA:3.30.9.30 35 269 2.9E-114 T 11-10-2018 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 SUPERFAMILY SSF82866 297 487 1.83E-37 T 11-10-2018 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 Gene3D G3DSA:1.20.1640.10 15 513 3.2E-253 T 11-10-2018 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 SUPERFAMILY SSF82693 42 138 8.37E-19 T 11-10-2018 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 Gene3D G3DSA:1.20.1640.10 527 1031 3.2E-253 T 11-10-2018 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 SUPERFAMILY SSF82714 187 266 5.1E-13 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 SUPERFAMILY SSF82693 139 325 3.45E-16 T 11-10-2018 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 Gene3D G3DSA:3.30.70.1440 680 879 3.2E-253 T 11-10-2018 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 SUPERFAMILY SSF82693 581 673 2.09E-5 T 11-10-2018 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 Pfam PF00873 AcrB/AcrD/AcrF family 7 1032 9.0E-169 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 Gene3D G3DSA:3.30.70.1430 42 827 3.2E-253 T 11-10-2018 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 SUPERFAMILY SSF82714 734 818 1.28E-14 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.2E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 1.2E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.2E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.2E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.2E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 Gene3D G3DSA:3.30.70.1430 581 679 3.2E-253 T 11-10-2018 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 SUPERFAMILY SSF82866 815 1038 7.72E-47 T 11-10-2018 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 Gene3D G3DSA:3.30.2090.10 731 819 3.2E-253 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 Gene3D G3DSA:3.30.70.1320 138 328 3.2E-253 T 11-10-2018 IX88_02030 548eae11cd1d5d5d3f119d7ed91edbb3 1041 Gene3D G3DSA:3.30.2090.10 181 270 3.2E-253 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_11410 42b256027ddb7f693f1fe41da1a56b2b 306 SUPERFAMILY SSF49482 15 290 5.36E-82 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 IX88_11410 42b256027ddb7f693f1fe41da1a56b2b 306 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 2 287 2.8E-145 T 11-10-2018 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1 IX88_11410 42b256027ddb7f693f1fe41da1a56b2b 306 Pfam PF04444 Catechol dioxygenase N terminus 23 92 1.2E-20 T 11-10-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 IX88_11410 42b256027ddb7f693f1fe41da1a56b2b 306 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 133 161 - T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 IX88_11410 42b256027ddb7f693f1fe41da1a56b2b 306 Pfam PF00775 Dioxygenase 101 287 4.6E-58 T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 IX88_11410 42b256027ddb7f693f1fe41da1a56b2b 306 Gene3D G3DSA:2.60.130.10 1 306 1.1E-119 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 IX88_11365 418882e5d4048ed690692c1de98cf023 524 Gene3D G3DSA:3.40.605.10 42 517 1.7E-203 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_11365 418882e5d4048ed690692c1de98cf023 524 Pfam PF00171 Aldehyde dehydrogenase family 17 456 2.1E-49 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_11365 418882e5d4048ed690692c1de98cf023 524 SUPERFAMILY SSF53720 18 516 2.49E-102 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_11365 418882e5d4048ed690692c1de98cf023 524 Gene3D G3DSA:3.40.309.10 265 452 1.7E-203 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_08430 1b10fc36d751cb52c1f27904a98c767e 342 SUPERFAMILY SSF46955 3 107 4.03E-28 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily IX88_08430 1b10fc36d751cb52c1f27904a98c767e 342 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_08430 1b10fc36d751cb52c1f27904a98c767e 342 Pfam PF07739 TipAS antibiotic-recognition domain 149 229 6.0E-8 T 11-10-2018 IPR012925 TipAS antibiotic-recognition domain IX88_08430 1b10fc36d751cb52c1f27904a98c767e 342 Pfam PF13411 MerR HTH family regulatory protein 4 70 3.2E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_08430 1b10fc36d751cb52c1f27904a98c767e 342 SMART SM00422 3 72 6.3E-29 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_08430 1b10fc36d751cb52c1f27904a98c767e 342 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.5E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_08430 1b10fc36d751cb52c1f27904a98c767e 342 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 2.5E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_08430 1b10fc36d751cb52c1f27904a98c767e 342 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.5E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_13390 18ca7ee088924c49d656faa65c8e12cc 206 Gene3D G3DSA:1.20.120.80 18 206 1.7E-52 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13390 18ca7ee088924c49d656faa65c8e12cc 206 SUPERFAMILY SSF81452 9 204 3.53E-56 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13390 18ca7ee088924c49d656faa65c8e12cc 206 Pfam PF00510 Cytochrome c oxidase subunit III 12 204 1.9E-14 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_13390 18ca7ee088924c49d656faa65c8e12cc 206 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 24 206 5.0E-80 T 11-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 IX88_13880 33d3692c301fa90fe85adf816afc88cc 293 Gene3D G3DSA:3.40.50.300 49 191 8.5E-11 T 11-10-2018 IX88_13880 33d3692c301fa90fe85adf816afc88cc 293 SUPERFAMILY SSF52540 43 191 8.52E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_13880 33d3692c301fa90fe85adf816afc88cc 293 Pfam PF05673 Protein of unknown function (DUF815) 36 283 2.2E-103 T 11-10-2018 IPR008533 Domain of unknown function DUF815 IX88_14885 c80cc0348b1fc927a98755e81e9d61e7 398 PIRSF PIRSF029215 5 397 1.3E-121 T 11-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 IX88_14885 c80cc0348b1fc927a98755e81e9d61e7 398 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 19 189 2.4E-52 T 11-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 IX88_11075 e31cb88aa877228074c47689a8df635e 255 SUPERFAMILY SSF55811 17 158 1.62E-28 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 IX88_11075 e31cb88aa877228074c47689a8df635e 255 Gene3D G3DSA:1.10.10.10 164 239 1.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_11075 e31cb88aa877228074c47689a8df635e 255 SUPERFAMILY SSF46785 164 234 5.44E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_11075 e31cb88aa877228074c47689a8df635e 255 Pfam PF00293 NUDIX domain 25 148 5.8E-11 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 IX88_11075 e31cb88aa877228074c47689a8df635e 255 Gene3D G3DSA:3.90.79.10 21 163 7.0E-34 T 11-10-2018 IX88_09145 f43c32a2101e34c90f4811f42b1fa4ba 431 PIRSF PIRSF016578 30 108 6.1E-7 T 11-10-2018 IX88_09145 f43c32a2101e34c90f4811f42b1fa4ba 431 PIRSF PIRSF016578 165 408 2.3E-16 T 11-10-2018 IX88_09145 f43c32a2101e34c90f4811f42b1fa4ba 431 SUPERFAMILY SSF56645 48 247 1.13E-36 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_09145 f43c32a2101e34c90f4811f42b1fa4ba 431 Gene3D G3DSA:1.20.140.10 246 425 5.4E-52 T 11-10-2018 IX88_09145 f43c32a2101e34c90f4811f42b1fa4ba 431 Gene3D G3DSA:1.10.540.10 32 146 4.1E-15 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_09145 f43c32a2101e34c90f4811f42b1fa4ba 431 SUPERFAMILY SSF47203 258 400 6.09E-10 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_09145 f43c32a2101e34c90f4811f42b1fa4ba 431 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 262 399 2.0E-12 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain IX88_09145 f43c32a2101e34c90f4811f42b1fa4ba 431 Gene3D G3DSA:2.40.110.10 147 245 3.2E-26 T 11-10-2018 IX88_16100 a295b817d330e9c8385dd017c06e215e 155 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 21 147 9.6E-46 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 IX88_16100 a295b817d330e9c8385dd017c06e215e 155 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 4 150 27.884 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 IX88_11430 72e18ee7ab4869c877c8d212ab1b473f 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 7.0E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_11430 72e18ee7ab4869c877c8d212ab1b473f 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 7.0E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_11430 72e18ee7ab4869c877c8d212ab1b473f 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 7.0E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_11430 72e18ee7ab4869c877c8d212ab1b473f 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 204 218 7.0E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_11430 72e18ee7ab4869c877c8d212ab1b473f 259 SUPERFAMILY SSF53474 5 257 1.05E-69 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_11430 72e18ee7ab4869c877c8d212ab1b473f 259 Pfam PF00561 alpha/beta hydrolase fold 22 244 2.2E-27 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_11430 72e18ee7ab4869c877c8d212ab1b473f 259 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 11 257 3.6E-91 T 11-10-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 IX88_11430 72e18ee7ab4869c877c8d212ab1b473f 259 Gene3D G3DSA:3.40.50.1820 3 258 1.3E-70 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_01875 b8240e82cecbe29a6389f79d3e7584aa 351 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 153 269 1.3E-18 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IX88_01875 b8240e82cecbe29a6389f79d3e7584aa 351 Gene3D G3DSA:3.10.180.10 148 349 3.9E-68 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IX88_01875 b8240e82cecbe29a6389f79d3e7584aa 351 PIRSF PIRSF009283 2 349 2.7E-108 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 IX88_01875 b8240e82cecbe29a6389f79d3e7584aa 351 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 348 5.3E-115 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 IX88_01875 b8240e82cecbe29a6389f79d3e7584aa 351 Gene3D G3DSA:3.10.180.10 1 147 1.7E-43 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IX88_01875 b8240e82cecbe29a6389f79d3e7584aa 351 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 5 134 6.1E-48 T 11-10-2018 IX88_01875 b8240e82cecbe29a6389f79d3e7584aa 351 SUPERFAMILY SSF54593 30 335 2.1E-75 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IX88_14925 c90b0f3ab124d5555bdad201a3ef017c 105 Pfam PF01527 Transposase 4 85 1.6E-6 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 IX88_14925 c90b0f3ab124d5555bdad201a3ef017c 105 Gene3D G3DSA:1.10.10.10 1 60 2.7E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_14925 c90b0f3ab124d5555bdad201a3ef017c 105 SUPERFAMILY SSF46689 1 97 1.97E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_16915 12c792417c817274c478b9a88b1f6ad7 232 Gene3D G3DSA:1.20.144.10 114 232 2.3E-6 T 11-10-2018 IX88_16915 12c792417c817274c478b9a88b1f6ad7 232 SUPERFAMILY SSF48317 11 223 7.03E-12 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily IX88_16915 12c792417c817274c478b9a88b1f6ad7 232 Pfam PF01569 PAP2 superfamily 99 215 7.2E-8 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase IX88_01710 3669683cca2556eafe11a8d100b9347a 283 Pfam PF02666 Phosphatidylserine decarboxylase 69 280 9.9E-60 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 IX88_01710 3669683cca2556eafe11a8d100b9347a 283 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 16 283 42.96 T 11-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 IX88_01710 3669683cca2556eafe11a8d100b9347a 283 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 56 280 1.7E-68 T 11-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 IX88_11090 aeb35e3e85def8106213d3d31dbd57b8 269 Pfam PF01925 Sulfite exporter TauE/SafE 5 265 1.2E-35 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 IX88_17920 269cb01ea26b95b2c5dc90278ceda667 147 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 25 145 4.0E-27 T 11-10-2018 IPR019223 Domain of unknown function DUF2147 IX88_17920 269cb01ea26b95b2c5dc90278ceda667 147 Gene3D G3DSA:2.40.128.520 20 147 3.0E-19 T 11-10-2018 IX88_01850 c0cbb02d152515587d7d91e88031ec61 462 Pfam PF00324 Amino acid permease 17 451 8.9E-108 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 IX88_01850 c0cbb02d152515587d7d91e88031ec61 462 Gene3D G3DSA:1.20.1740.10 10 461 1.7E-62 T 11-10-2018 IX88_01850 c0cbb02d152515587d7d91e88031ec61 462 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 IX88_01850 c0cbb02d152515587d7d91e88031ec61 462 PIRSF PIRSF006060 1 460 9.3E-79 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_10020 16e44faea413f2cd004fb0a243a5e4af 259 SUPERFAMILY SSF52833 143 258 1.14E-11 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_10020 16e44faea413f2cd004fb0a243a5e4af 259 Gene3D G3DSA:3.40.30.10 33 132 2.8E-13 T 11-10-2018 IX88_10020 16e44faea413f2cd004fb0a243a5e4af 259 Pfam PF13417 Glutathione S-transferase, N-terminal domain 162 258 2.7E-10 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 IX88_10020 16e44faea413f2cd004fb0a243a5e4af 259 Pfam PF13417 Glutathione S-transferase, N-terminal domain 38 113 5.8E-15 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 IX88_10020 16e44faea413f2cd004fb0a243a5e4af 259 SUPERFAMILY SSF52833 36 134 1.59E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_10020 16e44faea413f2cd004fb0a243a5e4af 259 Gene3D G3DSA:3.40.30.10 142 259 2.9E-17 T 11-10-2018 IX88_05780 981c671652da48cdc212b616ed32d125 173 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 161 1.7E-32 T 11-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05780 981c671652da48cdc212b616ed32d125 173 Gene3D G3DSA:1.20.120.1200 1 163 1.6E-44 T 11-10-2018 IX88_13945 6951b3a0b3f20bc461dcfa571fef59b9 379 Pfam PF12693 GspL periplasmic domain 232 370 2.0E-12 T 11-10-2018 IPR025691 GspL periplasmic domain IX88_13945 6951b3a0b3f20bc461dcfa571fef59b9 379 SUPERFAMILY SSF53067 1 133 5.05E-11 T 11-10-2018 IX88_13945 6951b3a0b3f20bc461dcfa571fef59b9 379 PIRSF PIRSF015761 10 379 1.6E-17 T 11-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 IX88_13945 6951b3a0b3f20bc461dcfa571fef59b9 379 Gene3D G3DSA:3.30.420.380 3 164 2.7E-7 T 11-10-2018 IX88_13945 6951b3a0b3f20bc461dcfa571fef59b9 379 Gene3D G3DSA:3.30.1360.100 298 379 8.8E-8 T 11-10-2018 IX88_13945 6951b3a0b3f20bc461dcfa571fef59b9 379 Pfam PF05134 Type II secretion system (T2SS), protein L 44 189 2.1E-8 T 11-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain IX88_04415 2534323fcdab93a2e37fbfa29f1e813d 323 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 3.7E-5 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 IX88_04415 2534323fcdab93a2e37fbfa29f1e813d 323 PRINTS PR00139 Asparaginase/glutaminase family signature 253 271 3.7E-5 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 IX88_04415 2534323fcdab93a2e37fbfa29f1e813d 323 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 3.7E-5 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 IX88_04415 2534323fcdab93a2e37fbfa29f1e813d 323 PIRSF PIRSF001220 1 313 3.7E-33 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 IX88_04415 2534323fcdab93a2e37fbfa29f1e813d 323 Gene3D G3DSA:3.40.50.1170 1 202 7.4E-36 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 IX88_04415 2534323fcdab93a2e37fbfa29f1e813d 323 Gene3D G3DSA:3.40.50.40 208 323 1.5E-11 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 IX88_04415 2534323fcdab93a2e37fbfa29f1e813d 323 SMART SM00870 3 315 9.9E-24 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 IX88_04415 2534323fcdab93a2e37fbfa29f1e813d 323 PIRSF PIRSF500176 1 306 4.9E-38 T 11-10-2018 IX88_04415 2534323fcdab93a2e37fbfa29f1e813d 323 SUPERFAMILY SSF53774 1 322 6.8E-61 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 IX88_04415 2534323fcdab93a2e37fbfa29f1e813d 323 Pfam PF00710 Asparaginase, N-terminal 3 174 5.3E-33 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 IX88_10040 d2817c721fbb5a097868ea4f6f5386c7 144 PIRSF PIRSF000714 1 138 2.9E-47 T 11-10-2018 IPR026026 Histidine triad hydrolase, Hint-type IX88_10040 d2817c721fbb5a097868ea4f6f5386c7 144 SUPERFAMILY SSF54197 1 131 4.68E-30 T 11-10-2018 IPR036265 HIT-like superfamily IX88_10040 d2817c721fbb5a097868ea4f6f5386c7 144 Pfam PF01230 HIT domain 10 98 4.5E-12 T 11-10-2018 IPR001310 Histidine triad (HIT) protein IX88_10040 d2817c721fbb5a097868ea4f6f5386c7 144 Gene3D G3DSA:3.30.428.10 1 136 1.2E-37 T 11-10-2018 IPR036265 HIT-like superfamily IX88_13050 b7c60ce121d00bc25a5fabb34f1e5517 503 Gene3D G3DSA:3.40.309.10 266 461 3.7E-159 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_13050 b7c60ce121d00bc25a5fabb34f1e5517 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 IX88_13050 b7c60ce121d00bc25a5fabb34f1e5517 503 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 IX88_13050 b7c60ce121d00bc25a5fabb34f1e5517 503 SUPERFAMILY SSF53720 14 495 4.45E-158 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_13050 b7c60ce121d00bc25a5fabb34f1e5517 503 Gene3D G3DSA:3.40.605.10 23 489 3.7E-159 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_13050 b7c60ce121d00bc25a5fabb34f1e5517 503 Pfam PF00171 Aldehyde dehydrogenase family 27 490 1.4E-158 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_06760 9efe1034ac641b9b79c8e3442b02141f 403 Gene3D G3DSA:3.30.390.30 316 402 1.4E-14 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 IX88_06760 9efe1034ac641b9b79c8e3442b02141f 403 Gene3D G3DSA:3.50.50.60 4 297 1.8E-86 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_06760 9efe1034ac641b9b79c8e3442b02141f 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 7.0E-14 T 11-10-2018 IX88_06760 9efe1034ac641b9b79c8e3442b02141f 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 7.0E-14 T 11-10-2018 IX88_06760 9efe1034ac641b9b79c8e3442b02141f 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 7.0E-14 T 11-10-2018 IX88_06760 9efe1034ac641b9b79c8e3442b02141f 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 7.0E-14 T 11-10-2018 IX88_06760 9efe1034ac641b9b79c8e3442b02141f 403 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 297 7.1E-54 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_06760 9efe1034ac641b9b79c8e3442b02141f 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.6E-11 T 11-10-2018 IX88_06760 9efe1034ac641b9b79c8e3442b02141f 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 2.6E-11 T 11-10-2018 IX88_06760 9efe1034ac641b9b79c8e3442b02141f 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 2.6E-11 T 11-10-2018 IX88_06760 9efe1034ac641b9b79c8e3442b02141f 403 Pfam PF14759 Reductase C-terminal 316 401 7.3E-17 T 11-10-2018 IPR028202 Reductase, C-terminal IX88_06760 9efe1034ac641b9b79c8e3442b02141f 403 Gene3D G3DSA:3.50.50.60 113 238 1.8E-86 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_06760 9efe1034ac641b9b79c8e3442b02141f 403 SUPERFAMILY SSF51905 3 191 5.6E-40 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_06760 9efe1034ac641b9b79c8e3442b02141f 403 SUPERFAMILY SSF51905 144 306 8.85E-25 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_06760 9efe1034ac641b9b79c8e3442b02141f 403 SUPERFAMILY SSF55424 309 401 8.51E-18 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 IX88_00765 25915321c87657799ad5269a8e108775 499 Pfam PF02875 Mur ligase family, glutamate ligase domain 334 416 1.3E-18 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 IX88_00765 25915321c87657799ad5269a8e108775 499 SUPERFAMILY SSF53623 101 330 9.03E-71 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IX88_00765 25915321c87657799ad5269a8e108775 499 Gene3D G3DSA:3.40.1190.10 100 337 1.8E-73 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IX88_00765 25915321c87657799ad5269a8e108775 499 Gene3D G3DSA:3.90.190.20 340 495 1.1E-55 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IX88_00765 25915321c87657799ad5269a8e108775 499 SUPERFAMILY SSF63418 15 93 2.35E-9 T 11-10-2018 IPR035911 MurE/MurF, N-terminal IX88_00765 25915321c87657799ad5269a8e108775 499 Gene3D G3DSA:3.40.1390.10 2 77 3.0E-8 T 11-10-2018 IX88_00765 25915321c87657799ad5269a8e108775 499 SUPERFAMILY SSF53244 334 485 1.02E-47 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IX88_00765 25915321c87657799ad5269a8e108775 499 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 485 30.885 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 IX88_00765 25915321c87657799ad5269a8e108775 499 Pfam PF08245 Mur ligase middle domain 108 313 6.0E-52 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 IX88_00765 25915321c87657799ad5269a8e108775 499 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 24 485 1.4E-142 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 IX88_09795 642cf5bc40d5b82efa596253711e4a0c 575 Gene3D G3DSA:1.20.1560.10 1 324 6.4E-76 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IX88_09795 642cf5bc40d5b82efa596253711e4a0c 575 Pfam PF00005 ABC transporter 352 501 3.1E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_09795 642cf5bc40d5b82efa596253711e4a0c 575 SUPERFAMILY SSF90123 10 321 1.44E-70 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IX88_09795 642cf5bc40d5b82efa596253711e4a0c 575 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 8 573 1.1E-206 T 11-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 IX88_09795 642cf5bc40d5b82efa596253711e4a0c 575 SMART SM00382 360 547 1.4E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_09795 642cf5bc40d5b82efa596253711e4a0c 575 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_09795 642cf5bc40d5b82efa596253711e4a0c 575 Gene3D G3DSA:3.40.50.300 326 574 5.8E-94 T 11-10-2018 IX88_09795 642cf5bc40d5b82efa596253711e4a0c 575 SUPERFAMILY SSF52540 327 570 1.36E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_09795 642cf5bc40d5b82efa596253711e4a0c 575 Pfam PF00664 ABC transporter transmembrane region 24 291 8.8E-48 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 IX88_05915 2c33849c052a88f88156fab01772ba0e 189 SUPERFAMILY SSF51283 3 188 6.54E-55 T 11-10-2018 IPR036157 dUTPase-like superfamily IX88_05915 2c33849c052a88f88156fab01772ba0e 189 Pfam PF00692 dUTPase 72 184 3.8E-9 T 11-10-2018 IPR029054 dUTPase-like IX88_05915 2c33849c052a88f88156fab01772ba0e 189 Hamap MF_00146 dCTP deaminase [dcd]. 1 189 29.071 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 IX88_05915 2c33849c052a88f88156fab01772ba0e 189 Gene3D G3DSA:2.70.40.10 1 161 1.7E-55 T 11-10-2018 IPR036157 dUTPase-like superfamily IX88_05915 2c33849c052a88f88156fab01772ba0e 189 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 188 8.5E-52 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 IX88_14670 6685f806d46c19aa60bc151aec8b3a1e 278 Gene3D G3DSA:3.20.20.220 1 278 3.5E-93 T 11-10-2018 IX88_14670 6685f806d46c19aa60bc151aec8b3a1e 278 SUPERFAMILY SSF51730 3 276 4.71E-89 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like IX88_14670 6685f806d46c19aa60bc151aec8b3a1e 278 Pfam PF02219 Methylenetetrahydrofolate reductase 3 274 4.1E-81 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 IX88_14670 6685f806d46c19aa60bc151aec8b3a1e 278 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 7 273 9.9E-94 T 11-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 IX88_07320 b60fdc7f4e4d31558c4e6944d47fb36c 611 Gene3D G3DSA:3.40.190.10 31 595 1.9E-216 T 11-10-2018 IX88_07320 b60fdc7f4e4d31558c4e6944d47fb36c 611 PIRSF PIRSF002741 3 600 3.0E-92 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 IX88_07320 b60fdc7f4e4d31558c4e6944d47fb36c 611 SUPERFAMILY SSF53850 51 596 1.41E-107 T 11-10-2018 IX88_07320 b60fdc7f4e4d31558c4e6944d47fb36c 611 Gene3D G3DSA:3.10.105.10 314 575 1.9E-216 T 11-10-2018 IX88_07320 b60fdc7f4e4d31558c4e6944d47fb36c 611 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 100 512 1.8E-71 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain IX88_03425 d25bdaa83f8e949de28fff6f166e8849 433 Pfam PF01842 ACT domain 352 417 1.8E-11 T 11-10-2018 IPR002912 ACT domain IX88_03425 d25bdaa83f8e949de28fff6f166e8849 433 Pfam PF00742 Homoserine dehydrogenase 135 313 1.1E-65 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 IX88_03425 d25bdaa83f8e949de28fff6f166e8849 433 Gene3D G3DSA:3.40.50.720 4 338 2.8E-160 T 11-10-2018 IX88_03425 d25bdaa83f8e949de28fff6f166e8849 433 SUPERFAMILY SSF55347 135 300 4.58E-54 T 11-10-2018 IX88_03425 d25bdaa83f8e949de28fff6f166e8849 433 SUPERFAMILY SSF51735 2 156 3.49E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_03425 d25bdaa83f8e949de28fff6f166e8849 433 Gene3D G3DSA:3.30.70.260 347 419 2.8E-160 T 11-10-2018 IX88_03425 d25bdaa83f8e949de28fff6f166e8849 433 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 127 9.3E-20 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 IX88_03425 d25bdaa83f8e949de28fff6f166e8849 433 Gene3D G3DSA:3.30.360.10 134 346 2.8E-160 T 11-10-2018 IX88_03425 d25bdaa83f8e949de28fff6f166e8849 433 SUPERFAMILY SSF55021 350 420 3.23E-11 T 11-10-2018 IX88_03425 d25bdaa83f8e949de28fff6f166e8849 433 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 181 203 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 IX88_03425 d25bdaa83f8e949de28fff6f166e8849 433 PIRSF PIRSF000098 1 431 2.7E-162 T 11-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 IX88_10240 221c1c6307a308c2961cfc29735f179a 362 Gene3D G3DSA:3.20.20.70 10 358 1.0E-152 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_10240 221c1c6307a308c2961cfc29735f179a 362 SUPERFAMILY SSF51569 15 356 1.28E-133 T 11-10-2018 IX88_10240 221c1c6307a308c2961cfc29735f179a 362 PIRSF PIRSF001361 1 362 6.4E-159 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 IX88_10240 221c1c6307a308c2961cfc29735f179a 362 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 14 357 7.5E-153 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 IX88_10240 221c1c6307a308c2961cfc29735f179a 362 Pfam PF00793 DAHP synthetase I family 52 347 3.3E-95 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 IX88_12955 73ff52c61bd763dd9ff3af1a1e37ad2e 165 Pfam PF01037 Lrp/AsnC ligand binding domain 78 151 1.4E-27 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IX88_12955 73ff52c61bd763dd9ff3af1a1e37ad2e 165 SUPERFAMILY SSF54909 76 156 1.88E-22 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel IX88_12955 73ff52c61bd763dd9ff3af1a1e37ad2e 165 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 7.3E-19 T 11-10-2018 IX88_12955 73ff52c61bd763dd9ff3af1a1e37ad2e 165 SUPERFAMILY SSF46785 10 71 1.5E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_12955 73ff52c61bd763dd9ff3af1a1e37ad2e 165 Gene3D G3DSA:3.30.70.920 66 149 5.1E-28 T 11-10-2018 IX88_12955 73ff52c61bd763dd9ff3af1a1e37ad2e 165 Gene3D G3DSA:1.10.10.10 5 65 1.5E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_12955 73ff52c61bd763dd9ff3af1a1e37ad2e 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 3.8E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_12955 73ff52c61bd763dd9ff3af1a1e37ad2e 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 3.8E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_12955 73ff52c61bd763dd9ff3af1a1e37ad2e 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 3.8E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_12955 73ff52c61bd763dd9ff3af1a1e37ad2e 165 SMART SM00344 12 121 9.0E-47 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 IX88_04840 5778be491d20422cdf8ab3655719b53c 152 Gene3D G3DSA:3.10.420.10 1 152 2.8E-50 T 11-10-2018 IPR035958 SecB-like superfamily IX88_04840 5778be491d20422cdf8ab3655719b53c 152 Hamap MF_00821 Protein-export protein SecB [secB]. 1 144 30.659 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 IX88_04840 5778be491d20422cdf8ab3655719b53c 152 SUPERFAMILY SSF54611 2 141 1.59E-45 T 11-10-2018 IPR035958 SecB-like superfamily IX88_04840 5778be491d20422cdf8ab3655719b53c 152 Pfam PF02556 Preprotein translocase subunit SecB 5 142 9.9E-49 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 IX88_04840 5778be491d20422cdf8ab3655719b53c 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 72 92 3.3E-31 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 IX88_04840 5778be491d20422cdf8ab3655719b53c 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 96 118 3.3E-31 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 IX88_04840 5778be491d20422cdf8ab3655719b53c 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 3.3E-31 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 IX88_04840 5778be491d20422cdf8ab3655719b53c 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 122 140 3.3E-31 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 IX88_04840 5778be491d20422cdf8ab3655719b53c 152 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 6 141 5.5E-46 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 IX88_01075 c555a9d1571ad677f774ffde774d4798 290 Gene3D G3DSA:3.40.50.10140 102 287 2.0E-42 T 11-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily IX88_01075 c555a9d1571ad677f774ffde774d4798 290 Pfam PF13676 TIR domain 159 248 5.4E-17 T 11-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 IX88_01075 c555a9d1571ad677f774ffde774d4798 290 SUPERFAMILY SSF52200 152 272 9.94E-26 T 11-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily IX88_01075 c555a9d1571ad677f774ffde774d4798 290 SMART SM00255 155 279 7.9E-4 T 11-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 IX88_04770 459f5e324bb0d19cbcb9637868647453 727 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 274 352 3.7E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 IX88_04770 459f5e324bb0d19cbcb9637868647453 727 SUPERFAMILY SSF50156 273 357 2.04E-12 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 IX88_04770 459f5e324bb0d19cbcb9637868647453 727 SUPERFAMILY SSF52096 225 574 8.78E-54 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_04770 459f5e324bb0d19cbcb9637868647453 727 Pfam PF03572 Peptidase family S41 395 568 5.1E-40 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 IX88_04770 459f5e324bb0d19cbcb9637868647453 727 Gene3D G3DSA:2.30.42.10 267 354 1.5E-12 T 11-10-2018 IX88_04770 459f5e324bb0d19cbcb9637868647453 727 SMART SM00245 360 570 2.8E-35 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 IX88_04770 459f5e324bb0d19cbcb9637868647453 727 Gene3D G3DSA:3.90.226.10 359 588 4.1E-54 T 11-10-2018 IX88_04770 459f5e324bb0d19cbcb9637868647453 727 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 236 589 1.5E-74 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 IX88_04770 459f5e324bb0d19cbcb9637868647453 727 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 574 722 2.7E-32 T 11-10-2018 IPR020992 Tail specific protease, C-terminal IX88_04770 459f5e324bb0d19cbcb9637868647453 727 SMART SM00228 276 356 3.9E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 IX88_16515 580ebdfddbab07bb56d98499a5ca0f72 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 320 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_16515 580ebdfddbab07bb56d98499a5ca0f72 439 Pfam PF00083 Sugar (and other) transporter 30 215 1.6E-28 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 IX88_16515 580ebdfddbab07bb56d98499a5ca0f72 439 Pfam PF00083 Sugar (and other) transporter 227 433 4.9E-13 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 IX88_16515 580ebdfddbab07bb56d98499a5ca0f72 439 SUPERFAMILY SSF103473 22 433 4.97E-66 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_16515 580ebdfddbab07bb56d98499a5ca0f72 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_16515 580ebdfddbab07bb56d98499a5ca0f72 439 Gene3D G3DSA:1.20.1250.20 20 438 3.7E-69 T 11-10-2018 IX88_07760 38a8783561ef8b0c87aefc042d502672 528 Gene3D G3DSA:3.40.309.10 267 456 8.7E-197 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_07760 38a8783561ef8b0c87aefc042d502672 528 SUPERFAMILY SSF53720 29 521 8.9E-93 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_07760 38a8783561ef8b0c87aefc042d502672 528 Pfam PF00171 Aldehyde dehydrogenase family 37 467 1.7E-45 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_07760 38a8783561ef8b0c87aefc042d502672 528 Gene3D G3DSA:3.40.605.10 44 521 8.7E-197 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_10360 ada2cd985a0b39d762919d8f5873c1d9 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 392 8.0E-140 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 IX88_10360 ada2cd985a0b39d762919d8f5873c1d9 395 SUPERFAMILY SSF53383 29 393 3.86E-120 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_10360 ada2cd985a0b39d762919d8f5873c1d9 395 Gene3D G3DSA:3.40.640.10 6 258 2.3E-88 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_10360 ada2cd985a0b39d762919d8f5873c1d9 395 PIRSF PIRSF001434 1 395 3.1E-133 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 IX88_10360 ada2cd985a0b39d762919d8f5873c1d9 395 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 12 392 5.3E-177 T 11-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 IX88_10360 ada2cd985a0b39d762919d8f5873c1d9 395 Gene3D G3DSA:3.90.1150.10 261 395 2.4E-51 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_10360 ada2cd985a0b39d762919d8f5873c1d9 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 203 217 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 IX88_10360 ada2cd985a0b39d762919d8f5873c1d9 395 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 13 393 53.58 T 11-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 IX88_13940 b1cb22b853f52f338ebbf4af6e357dbc 159 SUPERFAMILY SSF103054 92 158 3.27E-6 T 11-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily IX88_13940 b1cb22b853f52f338ebbf4af6e357dbc 159 Pfam PF04612 Type II secretion system (T2SS), protein M 16 158 5.8E-14 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 IX88_10425 0729e66ae571ab48869aefe573375691 334 PIRSF PIRSF037167 5 332 1.3E-136 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 IX88_10425 0729e66ae571ab48869aefe573375691 334 SUPERFAMILY SSF53335 21 318 5.47E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_10425 0729e66ae571ab48869aefe573375691 334 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 229 235 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 IX88_10425 0729e66ae571ab48869aefe573375691 334 Pfam PF05175 Methyltransferase small domain 147 256 3.3E-18 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 IX88_10425 0729e66ae571ab48869aefe573375691 334 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 11 325 50.111 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 IX88_10425 0729e66ae571ab48869aefe573375691 334 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 20 328 2.6E-77 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 IX88_10425 0729e66ae571ab48869aefe573375691 334 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 18 319 4.4E-112 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 IX88_10425 0729e66ae571ab48869aefe573375691 334 Gene3D G3DSA:3.40.50.150 109 308 1.0E-49 T 11-10-2018 IX88_16215 aa718ae9f64eefdd0ae95e23d4c020eb 355 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 253 3.0E-33 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 IX88_16215 aa718ae9f64eefdd0ae95e23d4c020eb 355 Pfam PF11890 Domain of unknown function (DUF3410) 298 349 6.8E-13 T 11-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 IX88_16215 aa718ae9f64eefdd0ae95e23d4c020eb 355 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 26 269 2.7E-18 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 IX88_16215 aa718ae9f64eefdd0ae95e23d4c020eb 355 Gene3D G3DSA:3.40.50.720 2 272 4.3E-106 T 11-10-2018 IX88_16215 aa718ae9f64eefdd0ae95e23d4c020eb 355 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 355 40.576 T 11-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 IX88_16215 aa718ae9f64eefdd0ae95e23d4c020eb 355 Gene3D G3DSA:3.30.1370.170 291 350 1.1E-11 T 11-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 IX88_16215 aa718ae9f64eefdd0ae95e23d4c020eb 355 SUPERFAMILY SSF52283 16 112 5.32E-18 T 11-10-2018 IX88_16215 aa718ae9f64eefdd0ae95e23d4c020eb 355 SUPERFAMILY SSF51735 91 254 1.85E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_16215 aa718ae9f64eefdd0ae95e23d4c020eb 355 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 IX88_16215 aa718ae9f64eefdd0ae95e23d4c020eb 355 Gene3D G3DSA:3.40.50.720 92 254 4.3E-106 T 11-10-2018 IX88_09690 7e228c8547b751192fd82aa11aa3980e 615 Pfam PF00005 ABC transporter 377 530 4.0E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_09690 7e228c8547b751192fd82aa11aa3980e 615 Gene3D G3DSA:3.40.50.300 351 604 1.3E-87 T 11-10-2018 IX88_09690 7e228c8547b751192fd82aa11aa3980e 615 SUPERFAMILY SSF90123 20 339 3.53E-47 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IX88_09690 7e228c8547b751192fd82aa11aa3980e 615 SUPERFAMILY SSF52540 350 600 3.97E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_09690 7e228c8547b751192fd82aa11aa3980e 615 Pfam PF00664 ABC transporter transmembrane region 41 307 5.5E-13 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 IX88_09690 7e228c8547b751192fd82aa11aa3980e 615 ProSitePatterns PS00211 ABC transporters family signature. 502 516 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_09690 7e228c8547b751192fd82aa11aa3980e 615 Gene3D G3DSA:1.20.1560.10 25 347 7.1E-25 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IX88_09690 7e228c8547b751192fd82aa11aa3980e 615 SMART SM00382 385 576 1.6E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_09340 ad302f427df8383a56f0d8a36c43cb6f 246 Pfam PF03591 AzlC protein 24 164 9.3E-33 T 11-10-2018 IPR011606 Branched-chain amino acid transport, permease IX88_05910 96a0bb97f80dfc28d6aa316a2099d102 197 Pfam PF01810 LysE type translocator 12 181 1.1E-12 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_17290 0a360815121f8a9309cf8a54c14f8526 114 SUPERFAMILY SSF57783 1 34 1.26E-14 T 11-10-2018 IX88_17290 0a360815121f8a9309cf8a54c14f8526 114 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 114 9.5E-49 T 11-10-2018 IPR004624 PhnA protein IX88_17290 0a360815121f8a9309cf8a54c14f8526 114 Pfam PF08274 PhnA Zinc-Ribbon 2 30 6.0E-17 T 11-10-2018 IPR013987 PhnA protein, N-terminal IX88_17290 0a360815121f8a9309cf8a54c14f8526 114 Gene3D G3DSA:2.20.25.10 1 41 1.1E-19 T 11-10-2018 IX88_17290 0a360815121f8a9309cf8a54c14f8526 114 SUPERFAMILY SSF82057 39 114 1.01E-27 T 11-10-2018 IX88_17290 0a360815121f8a9309cf8a54c14f8526 114 Gene3D G3DSA:2.30.30.40 42 114 1.3E-33 T 11-10-2018 IX88_17290 0a360815121f8a9309cf8a54c14f8526 114 Pfam PF03831 PhnA domain 44 114 7.1E-34 T 11-10-2018 IPR013988 PhnA protein, C-terminal IX88_10330 0b76fb6fa7432735ee0fec76061567b2 141 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 107 3.2E-17 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 IX88_10330 0b76fb6fa7432735ee0fec76061567b2 141 Gene3D G3DSA:2.170.150.70 4 116 3.0E-15 T 11-10-2018 IX88_10330 0b76fb6fa7432735ee0fec76061567b2 141 SUPERFAMILY SSF51316 4 132 1.88E-34 T 11-10-2018 IPR011057 Mss4-like superfamily IX88_06465 6ecabae3719ca338e54f3413efb39581 230 PIRSF PIRSF004848 1 230 1.0E-73 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 IX88_06465 6ecabae3719ca338e54f3413efb39581 230 Pfam PF01168 Alanine racemase, N-terminal domain 21 224 3.9E-27 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_06465 6ecabae3719ca338e54f3413efb39581 230 SUPERFAMILY SSF51419 4 222 7.85E-76 T 11-10-2018 IPR029066 PLP-binding barrel IX88_06465 6ecabae3719ca338e54f3413efb39581 230 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 224 2.4E-71 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 IX88_06465 6ecabae3719ca338e54f3413efb39581 230 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 76 90 - T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 IX88_06465 6ecabae3719ca338e54f3413efb39581 230 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 223 30.891 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 IX88_06465 6ecabae3719ca338e54f3413efb39581 230 Gene3D G3DSA:3.20.20.10 1 229 2.7E-81 T 11-10-2018 IPR029066 PLP-binding barrel IX88_03755 f5d34cb565c6dfab6691f1d56811eba2 189 SUPERFAMILY SSF53098 42 184 2.43E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_03755 f5d34cb565c6dfab6691f1d56811eba2 189 Pfam PF01609 Transposase DDE domain 93 183 1.2E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IX88_09460 f5d34cb565c6dfab6691f1d56811eba2 189 SUPERFAMILY SSF53098 42 184 2.43E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_09460 f5d34cb565c6dfab6691f1d56811eba2 189 Pfam PF01609 Transposase DDE domain 93 183 1.2E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IX88_01145 f5d34cb565c6dfab6691f1d56811eba2 189 SUPERFAMILY SSF53098 42 184 2.43E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_01145 f5d34cb565c6dfab6691f1d56811eba2 189 Pfam PF01609 Transposase DDE domain 93 183 1.2E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IX88_12330 f5d34cb565c6dfab6691f1d56811eba2 189 SUPERFAMILY SSF53098 42 184 2.43E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_12330 f5d34cb565c6dfab6691f1d56811eba2 189 Pfam PF01609 Transposase DDE domain 93 183 1.2E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IX88_12555 f5d34cb565c6dfab6691f1d56811eba2 189 SUPERFAMILY SSF53098 42 184 2.43E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_12555 f5d34cb565c6dfab6691f1d56811eba2 189 Pfam PF01609 Transposase DDE domain 93 183 1.2E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IX88_03695 f5d34cb565c6dfab6691f1d56811eba2 189 SUPERFAMILY SSF53098 42 184 2.43E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_03695 f5d34cb565c6dfab6691f1d56811eba2 189 Pfam PF01609 Transposase DDE domain 93 183 1.2E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IX88_04930 f5d34cb565c6dfab6691f1d56811eba2 189 SUPERFAMILY SSF53098 42 184 2.43E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_04930 f5d34cb565c6dfab6691f1d56811eba2 189 Pfam PF01609 Transposase DDE domain 93 183 1.2E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IX88_10950 f5d34cb565c6dfab6691f1d56811eba2 189 SUPERFAMILY SSF53098 42 184 2.43E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_10950 f5d34cb565c6dfab6691f1d56811eba2 189 Pfam PF01609 Transposase DDE domain 93 183 1.2E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IX88_05400 f5d34cb565c6dfab6691f1d56811eba2 189 SUPERFAMILY SSF53098 42 184 2.43E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_05400 f5d34cb565c6dfab6691f1d56811eba2 189 Pfam PF01609 Transposase DDE domain 93 183 1.2E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 IX88_01860 32c645059db668ec0898f9907c0edec9 210 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 74 2.2E-15 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 IX88_01860 32c645059db668ec0898f9907c0edec9 210 SUPERFAMILY SSF47616 80 208 1.39E-36 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IX88_01860 32c645059db668ec0898f9907c0edec9 210 Gene3D G3DSA:1.20.1050.10 88 210 2.8E-53 T 11-10-2018 IX88_01860 32c645059db668ec0898f9907c0edec9 210 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 208 2.1E-89 T 11-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 IX88_01860 32c645059db668ec0898f9907c0edec9 210 Gene3D G3DSA:3.40.30.10 1 87 1.3E-26 T 11-10-2018 IX88_01860 32c645059db668ec0898f9907c0edec9 210 Pfam PF14497 Glutathione S-transferase, C-terminal domain 124 197 3.6E-6 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal IX88_01860 32c645059db668ec0898f9907c0edec9 210 SUPERFAMILY SSF52833 1 89 5.83E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_09825 26356ec7a86265c94ac1a637dd1f9bb2 202 SUPERFAMILY SSF46689 3 74 1.23E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_09825 26356ec7a86265c94ac1a637dd1f9bb2 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 2.3E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_09825 26356ec7a86265c94ac1a637dd1f9bb2 202 Gene3D G3DSA:1.10.357.10 1 193 1.7E-17 T 11-10-2018 IX88_09825 26356ec7a86265c94ac1a637dd1f9bb2 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.8E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_09825 26356ec7a86265c94ac1a637dd1f9bb2 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.8E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_12065 6f8825d176ff2506273d5b286a6f81fd 836 PIRSF PIRSF006076 1 836 5.5E-245 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 IX88_12065 6f8825d176ff2506273d5b286a6f81fd 836 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 28 836 1.5E-236 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 IX88_12065 6f8825d176ff2506273d5b286a6f81fd 836 Gene3D G3DSA:3.10.20.310 22 95 3.6E-17 T 11-10-2018 IX88_12065 6f8825d176ff2506273d5b286a6f81fd 836 Gene3D G3DSA:3.10.20.310 96 177 7.1E-17 T 11-10-2018 IX88_12065 6f8825d176ff2506273d5b286a6f81fd 836 Pfam PF07244 Surface antigen variable number repeat 97 176 1.0E-11 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 IX88_12065 6f8825d176ff2506273d5b286a6f81fd 836 Pfam PF07244 Surface antigen variable number repeat 271 348 1.5E-11 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 IX88_12065 6f8825d176ff2506273d5b286a6f81fd 836 Pfam PF07244 Surface antigen variable number repeat 180 267 9.0E-13 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 IX88_12065 6f8825d176ff2506273d5b286a6f81fd 836 Pfam PF07244 Surface antigen variable number repeat 351 425 2.6E-15 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 IX88_12065 6f8825d176ff2506273d5b286a6f81fd 836 Gene3D G3DSA:2.40.160.50 431 836 4.7E-110 T 11-10-2018 IX88_12065 6f8825d176ff2506273d5b286a6f81fd 836 Gene3D G3DSA:3.10.20.310 179 270 2.0E-19 T 11-10-2018 IX88_12065 6f8825d176ff2506273d5b286a6f81fd 836 Gene3D G3DSA:3.10.20.310 271 347 2.7E-14 T 11-10-2018 IX88_12065 6f8825d176ff2506273d5b286a6f81fd 836 Pfam PF01103 Surface antigen 452 836 1.2E-74 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 IX88_12065 6f8825d176ff2506273d5b286a6f81fd 836 Gene3D G3DSA:3.10.20.310 348 425 9.8E-24 T 11-10-2018 IX88_12065 6f8825d176ff2506273d5b286a6f81fd 836 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 3 836 23.714 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 IX88_10120 78af53ac0e005468024bc8afc8dfd71e 430 SUPERFAMILY SSF47203 299 424 6.77E-37 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_10120 78af53ac0e005468024bc8afc8dfd71e 430 Gene3D G3DSA:1.10.540.10 67 191 1.3E-19 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_10120 78af53ac0e005468024bc8afc8dfd71e 430 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 300 424 7.1E-30 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_10120 78af53ac0e005468024bc8afc8dfd71e 430 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 79 189 5.1E-16 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_10120 78af53ac0e005468024bc8afc8dfd71e 430 Gene3D G3DSA:2.40.110.10 208 299 4.8E-9 T 11-10-2018 IX88_10120 78af53ac0e005468024bc8afc8dfd71e 430 SUPERFAMILY SSF56645 74 284 1.1E-29 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_10120 78af53ac0e005468024bc8afc8dfd71e 430 Gene3D G3DSA:1.20.140.10 300 428 7.7E-36 T 11-10-2018 IX88_10120 78af53ac0e005468024bc8afc8dfd71e 430 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 398 417 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 IX88_09570 fdb81963637543637df903c2134decfe 181 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 8.4E-60 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 IX88_09570 fdb81963637543637df903c2134decfe 181 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 IX88_09570 fdb81963637543637df903c2134decfe 181 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.185 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 IX88_09570 fdb81963637543637df903c2134decfe 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 3.2E-36 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 IX88_09570 fdb81963637543637df903c2134decfe 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 3.2E-36 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 IX88_09570 fdb81963637543637df903c2134decfe 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 3.2E-36 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 IX88_09570 fdb81963637543637df903c2134decfe 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 3.2E-36 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 IX88_09570 fdb81963637543637df903c2134decfe 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 3.2E-36 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 IX88_09570 fdb81963637543637df903c2134decfe 181 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 154 2.9E-62 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 IX88_09570 fdb81963637543637df903c2134decfe 181 Gene3D G3DSA:3.30.420.10 3 157 5.4E-51 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IX88_09570 fdb81963637543637df903c2134decfe 181 SUPERFAMILY SSF53098 3 155 9.1E-53 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_10325 fd7836cac5dbcc6e1600d70f7c6a4d8a 89 SMART SM01324 11 84 4.7E-21 T 11-10-2018 IPR025582 YARHG domain IX88_10325 fd7836cac5dbcc6e1600d70f7c6a4d8a 89 Pfam PF13308 YARHG domain 29 83 1.1E-6 T 11-10-2018 IPR025582 YARHG domain IX88_09410 af432f800805613e9bc5d49c1401b81f 297 SUPERFAMILY SSF53850 1 270 3.41E-60 T 11-10-2018 IX88_09410 af432f800805613e9bc5d49c1401b81f 297 Gene3D G3DSA:3.40.190.10 131 226 5.3E-92 T 11-10-2018 IX88_09410 af432f800805613e9bc5d49c1401b81f 297 SMART SM00062 38 269 6.8E-54 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IX88_09410 af432f800805613e9bc5d49c1401b81f 297 Gene3D G3DSA:3.40.190.10 27 272 5.3E-92 T 11-10-2018 IX88_09410 af432f800805613e9bc5d49c1401b81f 297 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 267 1.1E-49 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IX88_00710 f7cad80ee658274038554f149bbce7ea 189 Gene3D G3DSA:3.40.50.300 11 189 4.1E-60 T 11-10-2018 IX88_00710 f7cad80ee658274038554f149bbce7ea 189 SUPERFAMILY SSF52540 20 183 6.64E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_00710 f7cad80ee658274038554f149bbce7ea 189 PRINTS PR01100 Shikimate kinase family signature 91 100 1.3E-25 T 11-10-2018 IX88_00710 f7cad80ee658274038554f149bbce7ea 189 PRINTS PR01100 Shikimate kinase family signature 21 36 1.3E-25 T 11-10-2018 IX88_00710 f7cad80ee658274038554f149bbce7ea 189 PRINTS PR01100 Shikimate kinase family signature 112 129 1.3E-25 T 11-10-2018 IX88_00710 f7cad80ee658274038554f149bbce7ea 189 PRINTS PR01100 Shikimate kinase family signature 73 81 1.3E-25 T 11-10-2018 IX88_00710 f7cad80ee658274038554f149bbce7ea 189 PRINTS PR01100 Shikimate kinase family signature 45 58 1.3E-25 T 11-10-2018 IX88_00710 f7cad80ee658274038554f149bbce7ea 189 Hamap MF_00109 Shikimate kinase [aroK]. 18 184 29.932 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 IX88_00710 f7cad80ee658274038554f149bbce7ea 189 ProSitePatterns PS01128 Shikimate kinase signature. 74 99 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 IX88_00710 f7cad80ee658274038554f149bbce7ea 189 Pfam PF01202 Shikimate kinase 27 183 9.6E-54 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 IX88_05770 ff524dec65ac8d1eb18170f06b4428ce 338 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 63 78 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05770 ff524dec65ac8d1eb18170f06b4428ce 338 Pfam PF00146 NADH dehydrogenase 24 329 5.6E-121 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05770 ff524dec65ac8d1eb18170f06b4428ce 338 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 17 336 24.207 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05770 ff524dec65ac8d1eb18170f06b4428ce 338 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 218 231 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_10595 a446465ebf1327a825f02a3161bc7ab1 276 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 42 4.0E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_10595 a446465ebf1327a825f02a3161bc7ab1 276 Gene3D G3DSA:3.40.190.10 146 244 3.6E-55 T 11-10-2018 IX88_10595 a446465ebf1327a825f02a3161bc7ab1 276 Gene3D G3DSA:1.10.10.10 1 62 3.7E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_10595 a446465ebf1327a825f02a3161bc7ab1 276 Pfam PF03466 LysR substrate binding domain 75 271 2.8E-19 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_10595 a446465ebf1327a825f02a3161bc7ab1 276 SUPERFAMILY SSF46785 2 59 4.9E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_10595 a446465ebf1327a825f02a3161bc7ab1 276 Gene3D G3DSA:3.40.190.10 66 268 3.6E-55 T 11-10-2018 IX88_10595 a446465ebf1327a825f02a3161bc7ab1 276 SUPERFAMILY SSF53850 66 272 9.05E-38 T 11-10-2018 IX88_03575 8005c7f261a5d96df1d946de2b473fd7 756 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 593 626 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 IX88_03575 8005c7f261a5d96df1d946de2b473fd7 756 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 34 657 3.3E-164 T 11-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 IX88_03575 8005c7f261a5d96df1d946de2b473fd7 756 Pfam PF00263 Bacterial type II and III secretion system protein 484 647 2.5E-48 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 IX88_03575 8005c7f261a5d96df1d946de2b473fd7 756 PRINTS PR00811 Bacterial general secretion pathway protein D signature 394 404 7.1E-33 T 11-10-2018 IPR001775 GspD/PilQ family IX88_03575 8005c7f261a5d96df1d946de2b473fd7 756 PRINTS PR00811 Bacterial general secretion pathway protein D signature 635 649 7.1E-33 T 11-10-2018 IPR001775 GspD/PilQ family IX88_03575 8005c7f261a5d96df1d946de2b473fd7 756 PRINTS PR00811 Bacterial general secretion pathway protein D signature 515 525 7.1E-33 T 11-10-2018 IPR001775 GspD/PilQ family IX88_03575 8005c7f261a5d96df1d946de2b473fd7 756 PRINTS PR00811 Bacterial general secretion pathway protein D signature 480 504 7.1E-33 T 11-10-2018 IPR001775 GspD/PilQ family IX88_03575 8005c7f261a5d96df1d946de2b473fd7 756 PRINTS PR00811 Bacterial general secretion pathway protein D signature 612 630 7.1E-33 T 11-10-2018 IPR001775 GspD/PilQ family IX88_03575 8005c7f261a5d96df1d946de2b473fd7 756 Gene3D G3DSA:3.30.1370.120 24 186 6.2E-53 T 11-10-2018 IPR038591 NolW-like superfamily IX88_03575 8005c7f261a5d96df1d946de2b473fd7 756 Gene3D G3DSA:3.30.1370.120 191 258 6.3E-16 T 11-10-2018 IPR038591 NolW-like superfamily IX88_03575 8005c7f261a5d96df1d946de2b473fd7 756 Pfam PF03958 Bacterial type II/III secretion system short domain 193 261 5.3E-13 T 11-10-2018 IPR005644 NolW-like IX88_03575 8005c7f261a5d96df1d946de2b473fd7 756 Pfam PF03958 Bacterial type II/III secretion system short domain 268 394 8.6E-13 T 11-10-2018 IPR005644 NolW-like IX88_03575 8005c7f261a5d96df1d946de2b473fd7 756 Pfam PF03958 Bacterial type II/III secretion system short domain 129 185 1.1E-7 T 11-10-2018 IPR005644 NolW-like IX88_10985 1453df2392c7d46bfe3c78a79106e13d 260 Pfam PF01844 HNH endonuclease 186 240 9.8E-6 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 IX88_16585 2b1516e85b37917f7e49aaa3cecf236c 107 Gene3D G3DSA:3.30.110.60 2 105 2.8E-30 T 11-10-2018 IPR035920 YhbY-like superfamily IX88_16585 2b1516e85b37917f7e49aaa3cecf236c 107 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 6 94 1.4E-23 T 11-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 IX88_16585 2b1516e85b37917f7e49aaa3cecf236c 107 SUPERFAMILY SSF75471 4 97 1.44E-26 T 11-10-2018 IPR035920 YhbY-like superfamily IX88_16585 2b1516e85b37917f7e49aaa3cecf236c 107 SMART SM01103 4 87 1.5E-36 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 IX88_16585 2b1516e85b37917f7e49aaa3cecf236c 107 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 87 3.3E-19 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 IX88_16585 2b1516e85b37917f7e49aaa3cecf236c 107 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 12 86 8.0E-29 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 IX88_15210 c5a962aa8ece9375c49d6dd8202ce003 436 SUPERFAMILY SSF51905 2 249 7.69E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_15210 c5a962aa8ece9375c49d6dd8202ce003 436 TIGRFAM TIGR04439 histamin_N_OH: putative histamine N-monooxygenase 5 434 4.3E-255 T 11-10-2018 IPR031043 Putative histamine N-monooxygenase IX88_15210 c5a962aa8ece9375c49d6dd8202ce003 436 Gene3D G3DSA:3.50.50.60 1 430 7.2E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_15210 c5a962aa8ece9375c49d6dd8202ce003 436 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 3 343 2.3E-110 T 11-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase IX88_03900 935dda934eeaaf27ac19223886e2e728 555 SUPERFAMILY SSF52540 3 504 4.67E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_03900 935dda934eeaaf27ac19223886e2e728 555 Gene3D G3DSA:3.40.50.300 1 197 7.0E-22 T 11-10-2018 IX88_03900 935dda934eeaaf27ac19223886e2e728 555 Gene3D G3DSA:3.40.50.300 218 547 1.1E-47 T 11-10-2018 IX88_03900 935dda934eeaaf27ac19223886e2e728 555 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 505 2.1E-18 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal IX88_03900 935dda934eeaaf27ac19223886e2e728 555 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 545 4.8E-138 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 IX88_03900 935dda934eeaaf27ac19223886e2e728 555 PIRSF PIRSF003128 1 551 2.1E-137 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 IX88_03900 935dda934eeaaf27ac19223886e2e728 555 SUPERFAMILY SSF52540 1 215 1.65E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_13310 f6611c215049920dbda6e23e7373736b 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 IX88_13310 f6611c215049920dbda6e23e7373736b 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 358 1.5E-162 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 IX88_13310 f6611c215049920dbda6e23e7373736b 362 Gene3D G3DSA:1.20.58.410 2 101 3.0E-5 T 11-10-2018 IX88_13310 f6611c215049920dbda6e23e7373736b 362 Gene3D G3DSA:3.30.70.1660 112 342 2.9E-95 T 11-10-2018 IX88_13310 f6611c215049920dbda6e23e7373736b 362 SUPERFAMILY SSF75620 12 353 4.32E-135 T 11-10-2018 IX88_13310 f6611c215049920dbda6e23e7373736b 362 Pfam PF00472 RF-1 domain 213 321 2.6E-40 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 IX88_13310 f6611c215049920dbda6e23e7373736b 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.391 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 IX88_13310 f6611c215049920dbda6e23e7373736b 362 Pfam PF03462 PCRF domain 14 203 2.1E-73 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 IX88_13310 f6611c215049920dbda6e23e7373736b 362 Gene3D G3DSA:3.30.160.20 210 297 2.9E-95 T 11-10-2018 IX88_13310 f6611c215049920dbda6e23e7373736b 362 SMART SM00937 63 178 6.9E-66 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 IX88_17375 52c9002d2a33bf0cef60f8dbad36f690 486 Pfam PF00324 Amino acid permease 18 472 1.8E-138 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 IX88_17375 52c9002d2a33bf0cef60f8dbad36f690 486 PIRSF PIRSF006060 1 483 3.1E-81 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_17375 52c9002d2a33bf0cef60f8dbad36f690 486 ProSitePatterns PS00218 Amino acid permeases signature. 43 74 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 IX88_17375 52c9002d2a33bf0cef60f8dbad36f690 486 Gene3D G3DSA:1.20.1740.10 8 479 2.4E-61 T 11-10-2018 IX88_05640 7f3405e8a486da4323afb51af1eec73c 163 SUPERFAMILY SSF50475 6 159 1.47E-45 T 11-10-2018 IX88_05640 7f3405e8a486da4323afb51af1eec73c 163 Pfam PF01613 Flavin reductase like domain 11 158 8.5E-35 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 IX88_05640 7f3405e8a486da4323afb51af1eec73c 163 Gene3D G3DSA:2.30.110.10 1 162 5.3E-45 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 IX88_05640 7f3405e8a486da4323afb51af1eec73c 163 SMART SM00903 11 156 5.3E-53 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 IX88_09115 c56a3a44956fabd408f9f639a414c768 305 Pfam PF03466 LysR substrate binding domain 97 297 5.0E-31 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_09115 c56a3a44956fabd408f9f639a414c768 305 SUPERFAMILY SSF46785 7 81 4.35E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_09115 c56a3a44956fabd408f9f639a414c768 305 Gene3D G3DSA:1.10.10.10 5 89 1.1E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_09115 c56a3a44956fabd408f9f639a414c768 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 61 4.7E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_09115 c56a3a44956fabd408f9f639a414c768 305 SUPERFAMILY SSF53850 98 295 1.99E-25 T 11-10-2018 IX88_09115 c56a3a44956fabd408f9f639a414c768 305 Gene3D G3DSA:3.40.190.290 98 302 6.6E-34 T 11-10-2018 IX88_05075 1f013ac9f99dc69a087869997060e84b 262 SUPERFAMILY SSF52096 3 243 1.29E-64 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_05075 1f013ac9f99dc69a087869997060e84b 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 IX88_05075 1f013ac9f99dc69a087869997060e84b 262 Gene3D G3DSA:3.90.226.10 2 249 3.8E-65 T 11-10-2018 IX88_05075 1f013ac9f99dc69a087869997060e84b 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 220 9.9E-42 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 IX88_05465 c688d2da0e7c663586ae8691c24c75a8 282 Pfam PF00756 Putative esterase 21 270 7.9E-53 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 IX88_05465 c688d2da0e7c663586ae8691c24c75a8 282 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 3 275 1.1E-119 T 11-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 IX88_05465 c688d2da0e7c663586ae8691c24c75a8 282 SUPERFAMILY SSF53474 1 273 1.29E-78 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_05465 c688d2da0e7c663586ae8691c24c75a8 282 Gene3D G3DSA:3.40.50.1820 1 279 2.3E-87 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_16725 80111d3ec4be7d9e17138d6526d1dc2f 424 Gene3D G3DSA:2.20.28.60 2 52 6.9E-24 T 11-10-2018 IX88_16725 80111d3ec4be7d9e17138d6526d1dc2f 424 PRINTS PR00143 Citrate synthase signature 167 180 3.3E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 IX88_16725 80111d3ec4be7d9e17138d6526d1dc2f 424 PRINTS PR00143 Citrate synthase signature 360 376 3.3E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 IX88_16725 80111d3ec4be7d9e17138d6526d1dc2f 424 PRINTS PR00143 Citrate synthase signature 244 272 3.3E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 IX88_16725 80111d3ec4be7d9e17138d6526d1dc2f 424 PRINTS PR00143 Citrate synthase signature 297 317 3.3E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 IX88_16725 80111d3ec4be7d9e17138d6526d1dc2f 424 PRINTS PR00143 Citrate synthase signature 380 394 3.3E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 IX88_16725 80111d3ec4be7d9e17138d6526d1dc2f 424 PRINTS PR00143 Citrate synthase signature 222 237 3.3E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 IX88_16725 80111d3ec4be7d9e17138d6526d1dc2f 424 Gene3D G3DSA:1.10.580.10 59 411 1.4E-145 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 IX88_16725 80111d3ec4be7d9e17138d6526d1dc2f 424 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 IX88_16725 80111d3ec4be7d9e17138d6526d1dc2f 424 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 422 2.4E-242 T 11-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 IX88_16725 80111d3ec4be7d9e17138d6526d1dc2f 424 SUPERFAMILY SSF48256 6 422 5.89E-165 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 IX88_16725 80111d3ec4be7d9e17138d6526d1dc2f 424 PIRSF PIRSF001369 40 424 2.0E-170 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type IX88_16725 80111d3ec4be7d9e17138d6526d1dc2f 424 Pfam PF00285 Citrate synthase, C-terminal domain 48 411 2.3E-134 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 IX88_16725 80111d3ec4be7d9e17138d6526d1dc2f 424 Gene3D G3DSA:1.10.230.10 271 377 1.4E-145 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain IX88_04830 cfeb391cb6bcad7c6c35c769e3f4fed9 469 Pfam PF01926 50S ribosome-binding GTPase 179 296 9.4E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_04830 cfeb391cb6bcad7c6c35c769e3f4fed9 469 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.6E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_04830 cfeb391cb6bcad7c6c35c769e3f4fed9 469 Gene3D G3DSA:3.40.50.300 1 161 1.6E-43 T 11-10-2018 IX88_04830 cfeb391cb6bcad7c6c35c769e3f4fed9 469 SUPERFAMILY SSF52540 137 438 8.93E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04830 cfeb391cb6bcad7c6c35c769e3f4fed9 469 Gene3D G3DSA:3.30.300.20 352 434 5.4E-21 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta IX88_04830 cfeb391cb6bcad7c6c35c769e3f4fed9 469 Hamap MF_00195 GTPase Der [der]. 2 435 38.228 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 IX88_04830 cfeb391cb6bcad7c6c35c769e3f4fed9 469 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.3E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_04830 cfeb391cb6bcad7c6c35c769e3f4fed9 469 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.3E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_04830 cfeb391cb6bcad7c6c35c769e3f4fed9 469 PIRSF PIRSF006485 1 440 5.3E-174 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 IX88_04830 cfeb391cb6bcad7c6c35c769e3f4fed9 469 Gene3D G3DSA:3.40.50.300 171 351 6.8E-49 T 11-10-2018 IX88_04830 cfeb391cb6bcad7c6c35c769e3f4fed9 469 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 432 1.1E-179 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 IX88_04830 cfeb391cb6bcad7c6c35c769e3f4fed9 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 134 4.6E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IX88_04830 cfeb391cb6bcad7c6c35c769e3f4fed9 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 177 339 1.6E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IX88_04830 cfeb391cb6bcad7c6c35c769e3f4fed9 469 SUPERFAMILY SSF52540 4 168 1.81E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04830 cfeb391cb6bcad7c6c35c769e3f4fed9 469 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 352 432 5.6E-27 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like IX88_07970 812f0acee568cc0ea58ac272eb6a690b 439 Gene3D G3DSA:3.90.170.10 268 439 1.5E-61 T 11-10-2018 IX88_07970 812f0acee568cc0ea58ac272eb6a690b 439 Gene3D G3DSA:1.10.300.10 102 202 4.7E-98 T 11-10-2018 IX88_07970 812f0acee568cc0ea58ac272eb6a690b 439 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 437 1.1E-169 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 IX88_07970 812f0acee568cc0ea58ac272eb6a690b 439 SUPERFAMILY SSF52540 3 437 9.45E-167 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_07970 812f0acee568cc0ea58ac272eb6a690b 439 Pfam PF00709 Adenylosuccinate synthetase 5 431 2.0E-167 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 IX88_07970 812f0acee568cc0ea58ac272eb6a690b 439 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 IX88_07970 812f0acee568cc0ea58ac272eb6a690b 439 SMART SM00788 4 432 3.1E-277 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 IX88_07970 812f0acee568cc0ea58ac272eb6a690b 439 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 IX88_07970 812f0acee568cc0ea58ac272eb6a690b 439 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 439 203.039 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 IX88_07970 812f0acee568cc0ea58ac272eb6a690b 439 Gene3D G3DSA:3.40.440.10 6 250 4.7E-98 T 11-10-2018 IX88_03230 f4e6aea4a2b245ded579df6a6704914e 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 350 37.283 T 11-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 IX88_03230 f4e6aea4a2b245ded579df6a6704914e 351 Gene3D G3DSA:3.30.70.270 4 163 1.4E-63 T 11-10-2018 IX88_03230 f4e6aea4a2b245ded579df6a6704914e 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 232 345 2.1E-13 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IX88_03230 f4e6aea4a2b245ded579df6a6704914e 351 SUPERFAMILY SSF56672 1 233 9.78E-93 T 11-10-2018 IX88_03230 f4e6aea4a2b245ded579df6a6704914e 351 Pfam PF00817 impB/mucB/samB family 7 153 1.2E-51 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IX88_03230 f4e6aea4a2b245ded579df6a6704914e 351 Gene3D G3DSA:3.30.1490.100 239 346 3.6E-19 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IX88_03230 f4e6aea4a2b245ded579df6a6704914e 351 Gene3D G3DSA:1.10.150.20 165 228 4.5E-20 T 11-10-2018 IX88_03230 f4e6aea4a2b245ded579df6a6704914e 351 SUPERFAMILY SSF100879 237 336 6.08E-21 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IX88_03230 f4e6aea4a2b245ded579df6a6704914e 351 Gene3D G3DSA:2.30.40.20 21 72 1.4E-63 T 11-10-2018 IX88_03230 f4e6aea4a2b245ded579df6a6704914e 351 Pfam PF11798 IMS family HHH motif 168 194 1.1E-7 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 IX88_08380 2b5be7508acf5e38263d214856d002be 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 107 2.6E-19 T 11-10-2018 IPR022569 Ferredoxin, C-terminal IX88_08380 2b5be7508acf5e38263d214856d002be 107 Gene3D G3DSA:3.30.70.20 2 101 8.9E-33 T 11-10-2018 IX88_08380 2b5be7508acf5e38263d214856d002be 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 4.5E-18 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 IX88_08380 2b5be7508acf5e38263d214856d002be 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 4.5E-18 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 IX88_08380 2b5be7508acf5e38263d214856d002be 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 4.5E-18 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 IX88_08380 2b5be7508acf5e38263d214856d002be 107 SUPERFAMILY SSF54862 3 103 3.93E-25 T 11-10-2018 IX88_08380 2b5be7508acf5e38263d214856d002be 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IX88_08380 2b5be7508acf5e38263d214856d002be 107 Pfam PF00037 4Fe-4S binding domain 34 55 5.6E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IX88_08655 59ec36830f2790ba2e62f89fc2b573b2 400 Pfam PF00005 ABC transporter 56 198 4.8E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_08655 59ec36830f2790ba2e62f89fc2b573b2 400 Gene3D G3DSA:2.40.50.140 317 384 6.4E-12 T 11-10-2018 IX88_08655 59ec36830f2790ba2e62f89fc2b573b2 400 SUPERFAMILY SSF52540 41 278 6.14E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_08655 59ec36830f2790ba2e62f89fc2b573b2 400 SUPERFAMILY SSF50331 292 397 5.1E-9 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal IX88_08655 59ec36830f2790ba2e62f89fc2b573b2 400 Gene3D G3DSA:2.40.50.940 259 393 6.4E-12 T 11-10-2018 IX88_08655 59ec36830f2790ba2e62f89fc2b573b2 400 SMART SM00382 65 248 1.5E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_08655 59ec36830f2790ba2e62f89fc2b573b2 400 Gene3D G3DSA:3.40.50.300 39 258 4.8E-64 T 11-10-2018 IX88_08655 59ec36830f2790ba2e62f89fc2b573b2 400 ProSitePatterns PS00211 ABC transporters family signature. 171 185 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_01480 65b40cce266c1e5bdb32a13ad662fa6d 729 Gene3D G3DSA:2.170.130.10 62 184 3.6E-27 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_01480 65b40cce266c1e5bdb32a13ad662fa6d 729 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 174 7.4E-19 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_01480 65b40cce266c1e5bdb32a13ad662fa6d 729 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 80 729 5.4E-90 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 IX88_01480 65b40cce266c1e5bdb32a13ad662fa6d 729 Pfam PF00593 TonB dependent receptor 246 728 7.3E-54 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_01480 65b40cce266c1e5bdb32a13ad662fa6d 729 SUPERFAMILY SSF56935 72 729 2.69E-119 T 11-10-2018 IX88_01480 65b40cce266c1e5bdb32a13ad662fa6d 729 Gene3D G3DSA:2.40.170.20 185 729 1.4E-101 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IX88_02980 8adcde359c183a13000c40dd191e9c84 135 SUPERFAMILY SSF82784 16 132 7.33E-24 T 11-10-2018 IPR036102 OsmC/Ohr superfamily IX88_02980 8adcde359c183a13000c40dd191e9c84 135 Gene3D G3DSA:3.30.300.20 4 135 3.6E-25 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta IX88_02980 8adcde359c183a13000c40dd191e9c84 135 Pfam PF02566 OsmC-like protein 38 129 3.1E-14 T 11-10-2018 IPR003718 OsmC/Ohr family IX88_05230 27315bf848cdc953580952c95bfaa059 422 SMART SM00382 170 355 3.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_05230 27315bf848cdc953580952c95bfaa059 422 SMART SM00357 52 118 5.8E-19 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 IX88_05230 27315bf848cdc953580952c95bfaa059 422 SMART SM00959 5 47 8.6E-17 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 IX88_05230 27315bf848cdc953580952c95bfaa059 422 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 4.9E-211 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 IX88_05230 27315bf848cdc953580952c95bfaa059 422 SUPERFAMILY SSF50249 48 125 1.33E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_05230 27315bf848cdc953580952c95bfaa059 422 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.1E-32 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 IX88_05230 27315bf848cdc953580952c95bfaa059 422 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 242.778 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 IX88_05230 27315bf848cdc953580952c95bfaa059 422 SUPERFAMILY SSF52540 90 370 4.9E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_05230 27315bf848cdc953580952c95bfaa059 422 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.1E-15 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 IX88_05230 27315bf848cdc953580952c95bfaa059 422 Gene3D G3DSA:3.40.50.300 130 417 9.7E-129 T 11-10-2018 IX88_05230 27315bf848cdc953580952c95bfaa059 422 Gene3D G3DSA:1.10.720.10 1 46 4.1E-20 T 11-10-2018 IX88_05230 27315bf848cdc953580952c95bfaa059 422 SUPERFAMILY SSF68912 1 46 2.2E-11 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily IX88_05230 27315bf848cdc953580952c95bfaa059 422 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 3.2E-23 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IX88_05230 27315bf848cdc953580952c95bfaa059 422 Gene3D G3DSA:2.40.50.140 47 123 4.6E-34 T 11-10-2018 IX88_11235 361100d41a55ad58d648499377b28bd5 270 Pfam PF04909 Amidohydrolase 4 267 3.6E-24 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 IX88_11235 361100d41a55ad58d648499377b28bd5 270 Gene3D G3DSA:3.20.20.140 1 270 2.1E-71 T 11-10-2018 IX88_11235 361100d41a55ad58d648499377b28bd5 270 SUPERFAMILY SSF51556 2 267 6.35E-61 T 11-10-2018 IPR032466 Metal-dependent hydrolase IX88_16525 2152f960d4b0ed3285e142ddf1ec3719 222 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 88 155 4.7E-15 T 11-10-2018 IX88_16525 2152f960d4b0ed3285e142ddf1ec3719 222 SUPERFAMILY SSF53335 62 209 3.13E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_16525 2152f960d4b0ed3285e142ddf1ec3719 222 Gene3D G3DSA:3.40.50.150 51 212 6.0E-21 T 11-10-2018 IX88_02195 901c56e80041e0e9c744561d6df10f5f 382 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 261 381 3.5E-35 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 IX88_02195 901c56e80041e0e9c744561d6df10f5f 382 Pfam PF02767 DNA polymerase III beta subunit, central domain 133 259 3.4E-29 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 IX88_02195 901c56e80041e0e9c744561d6df10f5f 382 SUPERFAMILY SSF55979 261 382 4.49E-35 T 11-10-2018 IX88_02195 901c56e80041e0e9c744561d6df10f5f 382 Gene3D G3DSA:3.10.150.10 129 263 1.5E-31 T 11-10-2018 IX88_02195 901c56e80041e0e9c744561d6df10f5f 382 SMART SM00480 17 378 4.7E-122 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 IX88_02195 901c56e80041e0e9c744561d6df10f5f 382 SUPERFAMILY SSF55979 131 260 5.65E-21 T 11-10-2018 IX88_02195 901c56e80041e0e9c744561d6df10f5f 382 Gene3D G3DSA:3.10.150.10 264 382 6.7E-36 T 11-10-2018 IX88_02195 901c56e80041e0e9c744561d6df10f5f 382 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 2 381 8.3E-94 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 IX88_02195 901c56e80041e0e9c744561d6df10f5f 382 SUPERFAMILY SSF55979 3 120 9.87E-24 T 11-10-2018 IX88_02195 901c56e80041e0e9c744561d6df10f5f 382 PIRSF PIRSF000804 1 382 9.8E-107 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 IX88_02195 901c56e80041e0e9c744561d6df10f5f 382 Gene3D G3DSA:3.10.150.10 1 126 1.9E-35 T 11-10-2018 IX88_02195 901c56e80041e0e9c744561d6df10f5f 382 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 3 122 2.2E-31 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 IX88_11775 700660f8974816964065fce8e57787d3 979 Gene3D G3DSA:3.30.830.10 499 949 1.3E-109 T 11-10-2018 IX88_11775 700660f8974816964065fce8e57787d3 979 Pfam PF05193 Peptidase M16 inactive domain 208 391 3.8E-9 T 11-10-2018 IPR007863 Peptidase M16, C-terminal IX88_11775 700660f8974816964065fce8e57787d3 979 Pfam PF08367 Peptidase M16C associated 466 715 6.5E-59 T 11-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 IX88_11775 700660f8974816964065fce8e57787d3 979 SUPERFAMILY SSF63411 790 975 1.08E-38 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 IX88_11775 700660f8974816964065fce8e57787d3 979 SUPERFAMILY SSF63411 261 523 1.18E-55 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 IX88_11775 700660f8974816964065fce8e57787d3 979 SUPERFAMILY SSF63411 522 772 7.33E-52 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 IX88_11775 700660f8974816964065fce8e57787d3 979 Gene3D G3DSA:3.30.830.10 530 787 1.3E-109 T 11-10-2018 IX88_11775 700660f8974816964065fce8e57787d3 979 SMART SM01264 466 715 1.7E-83 T 11-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 IX88_11775 700660f8974816964065fce8e57787d3 979 SUPERFAMILY SSF63411 24 246 8.83E-43 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 IX88_11775 700660f8974816964065fce8e57787d3 979 Pfam PF00675 Insulinase (Peptidase family M16) 63 154 8.4E-8 T 11-10-2018 IPR011765 Peptidase M16, N-terminal IX88_11775 700660f8974816964065fce8e57787d3 979 Gene3D G3DSA:3.30.830.10 260 487 1.4E-55 T 11-10-2018 IX88_11775 700660f8974816964065fce8e57787d3 979 Gene3D G3DSA:3.30.830.10 3 253 1.3E-82 T 11-10-2018 IX88_06370 92883ff1c61c4e66c57179b0ccb281d1 90 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 9 88 5.0E-20 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 IX88_06370 92883ff1c61c4e66c57179b0ccb281d1 90 Gene3D G3DSA:3.30.1070.10 21 88 8.9E-21 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 IX88_06370 92883ff1c61c4e66c57179b0ccb281d1 90 SUPERFAMILY SSF55229 37 89 3.27E-11 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 IX88_06370 92883ff1c61c4e66c57179b0ccb281d1 90 Pfam PF03776 Septum formation topological specificity factor MinE 17 87 4.7E-19 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 IX88_06370 92883ff1c61c4e66c57179b0ccb281d1 90 Hamap MF_00262 Cell division topological specificity factor [minE]. 4 90 15.573 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 IX88_02205 7d65c1a20020e525331b75ca22e41542 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 2.1E-26 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_02205 7d65c1a20020e525331b75ca22e41542 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.163 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_02205 7d65c1a20020e525331b75ca22e41542 44 Pfam PF00468 Ribosomal protein L34 1 44 1.8E-25 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_02205 7d65c1a20020e525331b75ca22e41542 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 2.0E-14 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_02205 7d65c1a20020e525331b75ca22e41542 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_07505 4d9bace1d83918f1432300afcb673d87 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07505 4d9bace1d83918f1432300afcb673d87 144 Pfam PF00376 MerR family regulatory protein 9 46 1.0E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07505 4d9bace1d83918f1432300afcb673d87 144 Pfam PF09278 MerR, DNA binding 51 113 3.9E-18 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding IX88_07505 4d9bace1d83918f1432300afcb673d87 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 2.0E-25 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07505 4d9bace1d83918f1432300afcb673d87 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 2.0E-25 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07505 4d9bace1d83918f1432300afcb673d87 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 2.0E-25 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07505 4d9bace1d83918f1432300afcb673d87 144 SUPERFAMILY SSF46955 8 131 9.89E-30 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily IX88_07505 4d9bace1d83918f1432300afcb673d87 144 SMART SM00422 8 77 3.8E-29 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07505 4d9bace1d83918f1432300afcb673d87 144 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 1.1E-54 T 11-10-2018 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 IX88_07505 4d9bace1d83918f1432300afcb673d87 144 Gene3D G3DSA:1.10.1660.10 4 130 5.6E-32 T 11-10-2018 IX88_05765 0e38cee5f6ea7d9217f987b3fb4d9f3c 894 Pfam PF00384 Molybdopterin oxidoreductase 567 628 1.5E-8 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05765 0e38cee5f6ea7d9217f987b3fb4d9f3c 894 SUPERFAMILY SSF53706 219 679 2.3E-83 T 11-10-2018 IX88_05765 0e38cee5f6ea7d9217f987b3fb4d9f3c 894 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 77 3.4E-11 T 11-10-2018 IX88_05765 0e38cee5f6ea7d9217f987b3fb4d9f3c 894 SUPERFAMILY SSF50692 799 878 6.78E-8 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily IX88_05765 0e38cee5f6ea7d9217f987b3fb4d9f3c 894 Gene3D G3DSA:3.10.20.740 1 128 1.0E-28 T 11-10-2018 IX88_05765 0e38cee5f6ea7d9217f987b3fb4d9f3c 894 SUPERFAMILY SSF54862 82 213 1.0E-32 T 11-10-2018 IX88_05765 0e38cee5f6ea7d9217f987b3fb4d9f3c 894 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 127 6.1E-15 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05765 0e38cee5f6ea7d9217f987b3fb4d9f3c 894 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05765 0e38cee5f6ea7d9217f987b3fb4d9f3c 894 SUPERFAMILY SSF54292 1 77 3.28E-19 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 IX88_05765 0e38cee5f6ea7d9217f987b3fb4d9f3c 894 Gene3D G3DSA:3.40.50.740 508 679 6.2E-16 T 11-10-2018 IX88_05765 0e38cee5f6ea7d9217f987b3fb4d9f3c 894 SMART SM00929 88 128 1.7E-19 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05765 0e38cee5f6ea7d9217f987b3fb4d9f3c 894 Gene3D G3DSA:2.20.25.90 221 275 2.9E-13 T 11-10-2018 IX88_05765 0e38cee5f6ea7d9217f987b3fb4d9f3c 894 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 2.0E-11 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05765 0e38cee5f6ea7d9217f987b3fb4d9f3c 894 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05765 0e38cee5f6ea7d9217f987b3fb4d9f3c 894 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 645 1.6E-199 T 11-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05765 0e38cee5f6ea7d9217f987b3fb4d9f3c 894 SMART SM00926 221 275 1.2E-11 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05765 0e38cee5f6ea7d9217f987b3fb4d9f3c 894 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_04955 bfc3ba435672afe9273fe4ebd314aa19 530 Pfam PF16658 Class II release factor RF3, C-terminal domain 388 515 1.2E-46 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal IX88_04955 bfc3ba435672afe9273fe4ebd314aa19 530 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 5 528 51.355 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 IX88_04955 bfc3ba435672afe9273fe4ebd314aa19 530 SUPERFAMILY SSF54980 394 469 1.4E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like IX88_04955 bfc3ba435672afe9273fe4ebd314aa19 530 SUPERFAMILY SSF50447 263 394 2.36E-28 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IX88_04955 bfc3ba435672afe9273fe4ebd314aa19 530 SUPERFAMILY SSF52540 11 278 3.97E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04955 bfc3ba435672afe9273fe4ebd314aa19 530 Pfam PF00009 Elongation factor Tu GTP binding domain 14 278 3.7E-49 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_04955 bfc3ba435672afe9273fe4ebd314aa19 530 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 7 530 6.2E-257 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 IX88_04955 bfc3ba435672afe9273fe4ebd314aa19 530 Gene3D G3DSA:3.30.70.3280 391 530 2.3E-52 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily IX88_04955 bfc3ba435672afe9273fe4ebd314aa19 530 Gene3D G3DSA:3.40.50.300 111 276 1.8E-112 T 11-10-2018 IX88_04955 bfc3ba435672afe9273fe4ebd314aa19 530 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 59 74 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site IX88_04955 bfc3ba435672afe9273fe4ebd314aa19 530 Gene3D G3DSA:3.40.50.300 73 380 1.8E-112 T 11-10-2018 IX88_04955 bfc3ba435672afe9273fe4ebd314aa19 530 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 17 162 4.5E-20 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IX88_04955 bfc3ba435672afe9273fe4ebd314aa19 530 PRINTS PR00315 GTP-binding elongation factor signature 138 147 2.0E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_04955 bfc3ba435672afe9273fe4ebd314aa19 530 PRINTS PR00315 GTP-binding elongation factor signature 16 29 2.0E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_04955 bfc3ba435672afe9273fe4ebd314aa19 530 PRINTS PR00315 GTP-binding elongation factor signature 102 113 2.0E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_04955 bfc3ba435672afe9273fe4ebd314aa19 530 PRINTS PR00315 GTP-binding elongation factor signature 66 74 2.0E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_04955 bfc3ba435672afe9273fe4ebd314aa19 530 PRINTS PR00315 GTP-binding elongation factor signature 86 96 2.0E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_10315 a52f9a436f65953ff9a19678045fe420 368 Gene3D G3DSA:2.40.160.10 8 368 2.2E-50 T 11-10-2018 IPR023614 Porin domain superfamily IX88_10315 a52f9a436f65953ff9a19678045fe420 368 Pfam PF13609 Gram-negative porin 7 349 2.5E-30 T 11-10-2018 IX88_10315 a52f9a436f65953ff9a19678045fe420 368 SUPERFAMILY SSF56935 19 368 2.75E-44 T 11-10-2018 IX88_13810 f9dd1acbe786bddf552de0378bc53ed8 305 SUPERFAMILY SSF53850 101 303 2.35E-20 T 11-10-2018 IX88_13810 f9dd1acbe786bddf552de0378bc53ed8 305 Gene3D G3DSA:3.40.190.290 103 305 4.2E-13 T 11-10-2018 IX88_13810 f9dd1acbe786bddf552de0378bc53ed8 305 SUPERFAMILY SSF46785 13 98 1.25E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_13810 f9dd1acbe786bddf552de0378bc53ed8 305 Pfam PF03466 LysR substrate binding domain 99 301 9.2E-19 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_13810 f9dd1acbe786bddf552de0378bc53ed8 305 Gene3D G3DSA:1.10.10.10 12 102 1.6E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_13810 f9dd1acbe786bddf552de0378bc53ed8 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 1.1E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_06980 959a09c2a8101999525c1cdab1f2877b 314 Pfam PF00561 alpha/beta hydrolase fold 40 163 3.0E-18 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_06980 959a09c2a8101999525c1cdab1f2877b 314 SUPERFAMILY SSF53474 6 311 1.24E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_06980 959a09c2a8101999525c1cdab1f2877b 314 Gene3D G3DSA:3.40.50.1820 23 309 3.9E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_15480 53d1b144027c00dc8bceba92056cf6e9 154 Gene3D G3DSA:3.10.129.10 10 153 8.3E-47 T 11-10-2018 IX88_15480 53d1b144027c00dc8bceba92056cf6e9 154 SUPERFAMILY SSF54637 15 152 6.75E-23 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_15480 53d1b144027c00dc8bceba92056cf6e9 154 Pfam PF14539 Domain of unknown function (DUF4442) 17 150 3.7E-53 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 IX88_16180 feb6f52c53ee47ad73c619b1d4d0045e 281 SUPERFAMILY SSF54506 3 276 5.5E-57 T 11-10-2018 IX88_16180 feb6f52c53ee47ad73c619b1d4d0045e 281 Gene3D G3DSA:3.10.310.10 4 272 2.3E-111 T 11-10-2018 IX88_16180 feb6f52c53ee47ad73c619b1d4d0045e 281 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 IX88_16180 feb6f52c53ee47ad73c619b1d4d0045e 281 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 2.3E-95 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 IX88_16180 feb6f52c53ee47ad73c619b1d4d0045e 281 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.343 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 IX88_16180 feb6f52c53ee47ad73c619b1d4d0045e 281 Gene3D G3DSA:3.10.310.10 117 263 2.3E-111 T 11-10-2018 IX88_16180 feb6f52c53ee47ad73c619b1d4d0045e 281 Pfam PF01678 Diaminopimelate epimerase 5 125 7.2E-33 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 IX88_16180 feb6f52c53ee47ad73c619b1d4d0045e 281 Pfam PF01678 Diaminopimelate epimerase 155 268 1.2E-28 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 IX88_05805 e6b8597d0e806a732d5bfb84ef4d49cc 211 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 42.558 T 11-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 IX88_05805 e6b8597d0e806a732d5bfb84ef4d49cc 211 Pfam PF14681 Uracil phosphoribosyltransferase 7 206 1.6E-63 T 11-10-2018 IX88_05805 e6b8597d0e806a732d5bfb84ef4d49cc 211 Gene3D G3DSA:3.40.50.2020 2 207 5.0E-70 T 11-10-2018 IX88_05805 e6b8597d0e806a732d5bfb84ef4d49cc 211 SUPERFAMILY SSF53271 5 206 1.21E-65 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like IX88_05805 e6b8597d0e806a732d5bfb84ef4d49cc 211 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 207 6.7E-86 T 11-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 IX88_07925 227a61248b170c6993f9b5a13c134385 332 SUPERFAMILY SSF51556 5 331 9.93E-95 T 11-10-2018 IPR032466 Metal-dependent hydrolase IX88_07925 227a61248b170c6993f9b5a13c134385 332 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 10 328 1.9E-127 T 11-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 IX88_07925 227a61248b170c6993f9b5a13c134385 332 Hamap MF_01962 Adenine deaminase. 6 318 90.069 T 11-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 IX88_07925 227a61248b170c6993f9b5a13c134385 332 Gene3D G3DSA:3.20.20.140 1 332 2.1E-110 T 11-10-2018 IX88_07925 227a61248b170c6993f9b5a13c134385 332 Pfam PF00962 Adenosine/AMP deaminase 10 327 2.7E-81 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 IX88_03025 17f3bb565fc691236fd7604e18e1beac 165 Pfam PF01475 Ferric uptake regulator family 36 152 4.7E-10 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 IX88_03025 17f3bb565fc691236fd7604e18e1beac 165 SUPERFAMILY SSF46785 27 159 9.28E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_03025 17f3bb565fc691236fd7604e18e1beac 165 Gene3D G3DSA:3.30.1490.190 106 164 4.2E-13 T 11-10-2018 IX88_03025 17f3bb565fc691236fd7604e18e1beac 165 Gene3D G3DSA:1.10.10.10 16 105 5.9E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_12515 3e9d25df321d7aee16e44cf56d043686 438 Gene3D G3DSA:3.40.50.300 6 197 1.3E-22 T 11-10-2018 IX88_12515 3e9d25df321d7aee16e44cf56d043686 438 Gene3D G3DSA:3.30.420.280 241 422 3.1E-9 T 11-10-2018 IX88_12515 3e9d25df321d7aee16e44cf56d043686 438 Pfam PF17289 Terminase RNaseH-like domain 267 417 1.8E-11 T 11-10-2018 IPR035421 Terminase, large subunit gp17-like IX88_16395 2354e2643c8943f1af1c3af28f2eb850 96 Pfam PF11112 Pyocin activator protein PrtN 7 78 8.9E-15 T 11-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 IX88_16395 2354e2643c8943f1af1c3af28f2eb850 96 ProDom PD069311 TRANSCRIPTIONAL ACTIVATOR PRTN TRANSCRIPTION PYOCIN BIOSYNTHESIS DNA-BINDING BACTERIOCIN REGULATOR REGULATOR 2 74 6.0E-4 T 11-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 892 956 4.6E-21 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 Gene3D G3DSA:3.90.740.10 215 258 1.9E-6 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 TIGRFAM TIGR00422 valS: valine--tRNA ligase 11 939 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 22 637 9.9E-217 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 Pfam PF08264 Anticodon-binding domain of tRNA 680 828 2.1E-38 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 SUPERFAMILY SSF50677 197 369 6.67E-56 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 Gene3D G3DSA:1.10.287.380 885 957 1.7E-21 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 Gene3D G3DSA:3.40.50.620 11 214 3.2E-68 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 Hamap MF_02004 Valine--tRNA ligase [valS]. 10 957 16.063 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 Gene3D G3DSA:3.40.50.620 337 561 3.3E-74 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 SUPERFAMILY SSF46589 892 956 6.8E-16 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 PRINTS PR00986 Valyl-tRNA synthetase signature 475 496 4.3E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 PRINTS PR00986 Valyl-tRNA synthetase signature 375 388 4.3E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 PRINTS PR00986 Valyl-tRNA synthetase signature 243 260 4.3E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 4.3E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 PRINTS PR00986 Valyl-tRNA synthetase signature 506 524 4.3E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 SUPERFAMILY SSF47323 648 907 8.41E-67 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 Gene3D G3DSA:1.10.730.10 587 825 1.4E-70 T 11-10-2018 IX88_16885 5b01333900535f2f3b217e1d3361d02b 959 SUPERFAMILY SSF52374 10 647 7.68E-140 T 11-10-2018 IX88_15355 69837b0f4562325c457eb4a1084523d7 276 Gene3D G3DSA:3.10.350.10 51 105 8.0E-14 T 11-10-2018 IPR036779 LysM domain superfamily IX88_15355 69837b0f4562325c457eb4a1084523d7 276 SUPERFAMILY SSF51261 54 274 1.99E-44 T 11-10-2018 IPR011055 Duplicated hybrid motif IX88_15355 69837b0f4562325c457eb4a1084523d7 276 SMART SM00257 54 98 1.2E-12 T 11-10-2018 IPR018392 LysM domain IX88_15355 69837b0f4562325c457eb4a1084523d7 276 Pfam PF01476 LysM domain 55 97 5.6E-13 T 11-10-2018 IPR018392 LysM domain IX88_15355 69837b0f4562325c457eb4a1084523d7 276 Pfam PF01551 Peptidase family M23 178 270 1.1E-27 T 11-10-2018 IPR016047 Peptidase M23 IX88_15355 69837b0f4562325c457eb4a1084523d7 276 Gene3D G3DSA:2.70.70.10 143 274 3.8E-31 T 11-10-2018 IPR011055 Duplicated hybrid motif IX88_04545 b1f755509684bf5d1e73e7cd81d38054 482 Gene3D G3DSA:3.40.309.10 230 432 9.5E-147 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_04545 b1f755509684bf5d1e73e7cd81d38054 482 PIRSF PIRSF036492 2 482 2.3E-155 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 IX88_04545 b1f755509684bf5d1e73e7cd81d38054 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 226 233 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 IX88_04545 b1f755509684bf5d1e73e7cd81d38054 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 254 265 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 IX88_04545 b1f755509684bf5d1e73e7cd81d38054 482 SUPERFAMILY SSF53720 10 476 4.19E-113 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_04545 b1f755509684bf5d1e73e7cd81d38054 482 Pfam PF00171 Aldehyde dehydrogenase family 38 444 5.6E-89 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_04545 b1f755509684bf5d1e73e7cd81d38054 482 Gene3D G3DSA:3.40.605.10 33 452 9.5E-147 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_16730 49ed649dfab2c8b39ef8bc05309c8358 161 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 6.1E-15 T 11-10-2018 IPR010710 Protein of unknown function DUF1289 IX88_10050 134cc018c872972713a0fa49d341aee9 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 9.5E-11 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 IX88_10050 134cc018c872972713a0fa49d341aee9 112 Gene3D G3DSA:3.10.20.30 1 112 3.4E-33 T 11-10-2018 IPR012675 Beta-grasp domain superfamily IX88_10050 134cc018c872972713a0fa49d341aee9 112 PRINTS PR00355 Adrenodoxin signature 42 52 5.2E-9 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 IX88_10050 134cc018c872972713a0fa49d341aee9 112 PRINTS PR00355 Adrenodoxin signature 83 91 5.2E-9 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 IX88_10050 134cc018c872972713a0fa49d341aee9 112 PRINTS PR00355 Adrenodoxin signature 60 74 5.2E-9 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 IX88_10050 134cc018c872972713a0fa49d341aee9 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 3.7E-53 T 11-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 IX88_10050 134cc018c872972713a0fa49d341aee9 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 11-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 IX88_10050 134cc018c872972713a0fa49d341aee9 112 SUPERFAMILY SSF54292 6 108 1.76E-28 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 IX88_12925 2c0f44d792312be0ada287aca32a5385 411 SUPERFAMILY SSF50182 186 252 4.25E-12 T 11-10-2018 IPR010920 LSM domain superfamily IX88_12925 2c0f44d792312be0ada287aca32a5385 411 Pfam PF00924 Mechanosensitive ion channel 142 395 1.9E-49 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 IX88_07895 f254fd24612b2172e72b82d54f07fb6d 240 Pfam PF02678 Pirin 8 119 2.5E-35 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 IX88_07895 f254fd24612b2172e72b82d54f07fb6d 240 PIRSF PIRSF006232 1 238 1.6E-51 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 IX88_07895 f254fd24612b2172e72b82d54f07fb6d 240 Gene3D G3DSA:2.60.120.10 12 132 3.1E-56 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_07895 f254fd24612b2172e72b82d54f07fb6d 240 SUPERFAMILY SSF51182 1 233 3.47E-75 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_07895 f254fd24612b2172e72b82d54f07fb6d 240 Gene3D G3DSA:2.60.120.10 133 237 8.4E-29 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_17025 5b7185270829360b9dac656d07fc7654 344 SMART SM00342 250 332 6.7E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_17025 5b7185270829360b9dac656d07fc7654 344 Gene3D G3DSA:1.10.10.60 231 341 8.0E-25 T 11-10-2018 IX88_17025 5b7185270829360b9dac656d07fc7654 344 SUPERFAMILY SSF46689 286 335 4.66E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_17025 5b7185270829360b9dac656d07fc7654 344 Pfam PF12833 Helix-turn-helix domain 257 332 2.1E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_17025 5b7185270829360b9dac656d07fc7654 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 316 1.0E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_17025 5b7185270829360b9dac656d07fc7654 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 316 332 1.0E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_17025 5b7185270829360b9dac656d07fc7654 344 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 203 4.7E-21 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal IX88_05875 1ca3c6d8d1a26895c8545d211126c8ab 207 Pfam PF01810 LysE type translocator 18 204 1.3E-34 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_04385 91ef8a031002e9d19f15c8b89d0aa36d 359 Gene3D G3DSA:3.40.718.10 2 359 2.3E-146 T 11-10-2018 IX88_04385 91ef8a031002e9d19f15c8b89d0aa36d 359 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 245 264 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 IX88_04385 91ef8a031002e9d19f15c8b89d0aa36d 359 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 358 51.826 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 IX88_04385 91ef8a031002e9d19f15c8b89d0aa36d 359 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 354 4.5E-138 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 IX88_04385 91ef8a031002e9d19f15c8b89d0aa36d 359 SMART SM01329 4 354 1.6E-202 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 IX88_04385 91ef8a031002e9d19f15c8b89d0aa36d 359 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 353 2.4E-157 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 IX88_04385 91ef8a031002e9d19f15c8b89d0aa36d 359 SUPERFAMILY SSF53659 1 358 2.88E-121 T 11-10-2018 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 2.6E-49 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 2.6E-49 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 2.6E-49 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 260 283 2.6E-49 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 472 498 2.6E-49 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 Pfam PF00141 Peroxidase 395 691 1.5E-32 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 Pfam PF00141 Peroxidase 80 389 3.0E-48 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 11-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 Gene3D G3DSA:1.10.420.20 191 390 1.6E-206 T 11-10-2018 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 Hamap MF_01961 Catalase-peroxidase [katG]. 2 718 38.489 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 5.8E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 5.8E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 PRINTS PR00458 Haem peroxidase superfamily signature 252 267 5.8E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 5.8E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 PRINTS PR00458 Haem peroxidase superfamily signature 311 326 5.8E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 Gene3D G3DSA:1.10.420.10 570 693 3.3E-132 T 11-10-2018 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 21 717 0.0 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 SUPERFAMILY SSF48113 23 422 7.37E-137 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 SUPERFAMILY SSF48113 428 717 9.28E-99 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 Gene3D G3DSA:1.10.520.10 424 717 3.3E-132 T 11-10-2018 IX88_04340 9b88163ff12b4abbfb2130ee1265b39e 718 Gene3D G3DSA:1.10.520.10 21 423 1.6E-206 T 11-10-2018 IX88_07865 588bd377e363206857781897255ef3c1 337 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 25 207 4.5E-40 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal IX88_07865 588bd377e363206857781897255ef3c1 337 Gene3D G3DSA:1.10.10.60 229 337 6.2E-18 T 11-10-2018 IX88_07865 588bd377e363206857781897255ef3c1 337 SMART SM00342 251 333 3.3E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_07865 588bd377e363206857781897255ef3c1 337 SUPERFAMILY SSF46689 287 334 1.88E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_07865 588bd377e363206857781897255ef3c1 337 Pfam PF12833 Helix-turn-helix domain 257 333 1.1E-14 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_00715 a509fac55b21f520c9b9904fe100b740 721 Pfam PF11741 AMIN domain 39 118 1.1E-7 T 11-10-2018 IPR021731 AMIN domain IX88_00715 a509fac55b21f520c9b9904fe100b740 721 Pfam PF03958 Bacterial type II/III secretion system short domain 360 455 1.0E-12 T 11-10-2018 IPR005644 NolW-like IX88_00715 a509fac55b21f520c9b9904fe100b740 721 SMART SM00965 286 334 5.5E-11 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 IX88_00715 a509fac55b21f520c9b9904fe100b740 721 Pfam PF07660 Secretin and TonB N terminus short domain 291 333 2.5E-9 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 IX88_00715 a509fac55b21f520c9b9904fe100b740 721 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 261 714 9.2E-165 T 11-10-2018 IPR013355 Type IV pilus secretin PilQ IX88_00715 a509fac55b21f520c9b9904fe100b740 721 Gene3D G3DSA:2.60.40.3500 17 125 1.9E-5 T 11-10-2018 IX88_00715 a509fac55b21f520c9b9904fe100b740 721 Pfam PF00263 Bacterial type II and III secretion system protein 555 713 2.0E-49 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 IX88_00715 a509fac55b21f520c9b9904fe100b740 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 551 575 3.4E-19 T 11-10-2018 IPR001775 GspD/PilQ family IX88_00715 a509fac55b21f520c9b9904fe100b740 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 455 465 3.4E-19 T 11-10-2018 IPR001775 GspD/PilQ family IX88_00715 a509fac55b21f520c9b9904fe100b740 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 701 715 3.4E-19 T 11-10-2018 IPR001775 GspD/PilQ family IX88_00715 a509fac55b21f520c9b9904fe100b740 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 678 696 3.4E-19 T 11-10-2018 IPR001775 GspD/PilQ family IX88_00715 a509fac55b21f520c9b9904fe100b740 721 Gene3D G3DSA:3.55.50.30 261 331 3.8E-9 T 11-10-2018 IX88_00715 a509fac55b21f520c9b9904fe100b740 721 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 659 692 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 IX88_00715 a509fac55b21f520c9b9904fe100b740 721 Gene3D G3DSA:2.60.40.3470 126 247 3.1E-27 T 11-10-2018 IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 SUPERFAMILY SSF53223 7 270 1.15E-110 T 11-10-2018 IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 1.8E-78 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 Gene3D G3DSA:3.40.50.10380 16 268 6.3E-115 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 Gene3D G3DSA:3.40.50.720 269 564 9.7E-109 T 11-10-2018 IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 PIRSF PIRSF000106 4 563 1.9E-229 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 SMART SM01274 81 261 1.4E-107 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 SMART SM00919 271 531 1.8E-131 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 71.237 T 11-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 9.2E-102 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 SUPERFAMILY SSF51735 271 562 1.5E-94 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 PRINTS PR00072 Malic enzyme signature 87 111 1.1E-74 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 PRINTS PR00072 Malic enzyme signature 408 424 1.1E-74 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 PRINTS PR00072 Malic enzyme signature 183 205 1.1E-74 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 PRINTS PR00072 Malic enzyme signature 267 283 1.1E-74 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 PRINTS PR00072 Malic enzyme signature 242 260 1.1E-74 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 PRINTS PR00072 Malic enzyme signature 298 314 1.1E-74 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 IX88_03000 4c6793dc693af893ae362c5c649d6cf0 565 PRINTS PR00072 Malic enzyme signature 147 176 1.1E-74 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 IX88_13975 966fb9bfb61630ec775b6790db60af96 825 Gene3D G3DSA:1.10.530.10 5 182 3.8E-8 T 11-10-2018 IX88_13975 966fb9bfb61630ec775b6790db60af96 825 SUPERFAMILY SSF53955 16 125 1.29E-6 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily IX88_13285 b5cfa612d8ded53b9a357dcac1a254d1 256 Gene3D G3DSA:3.40.50.720 1 256 1.3E-76 T 11-10-2018 IX88_13285 b5cfa612d8ded53b9a357dcac1a254d1 256 SUPERFAMILY SSF51735 3 251 3.38E-63 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_13285 b5cfa612d8ded53b9a357dcac1a254d1 256 Pfam PF00106 short chain dehydrogenase 6 204 2.4E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_13285 b5cfa612d8ded53b9a357dcac1a254d1 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_13285 b5cfa612d8ded53b9a357dcac1a254d1 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_13285 b5cfa612d8ded53b9a357dcac1a254d1 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 1.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_13285 b5cfa612d8ded53b9a357dcac1a254d1 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_13285 b5cfa612d8ded53b9a357dcac1a254d1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 5.7E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_13285 b5cfa612d8ded53b9a357dcac1a254d1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 5.7E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_13285 b5cfa612d8ded53b9a357dcac1a254d1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 5.7E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_13285 b5cfa612d8ded53b9a357dcac1a254d1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.7E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_13285 b5cfa612d8ded53b9a357dcac1a254d1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.7E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_13285 b5cfa612d8ded53b9a357dcac1a254d1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 5.7E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_13285 b5cfa612d8ded53b9a357dcac1a254d1 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 197 0.0018 T 11-10-2018 IX88_04940 7a02b347500d3805d2b36835c211ea1f 187 Gene3D G3DSA:1.10.357.10 9 180 1.4E-19 T 11-10-2018 IX88_04940 7a02b347500d3805d2b36835c211ea1f 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.5E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_04940 7a02b347500d3805d2b36835c211ea1f 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.5E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_04940 7a02b347500d3805d2b36835c211ea1f 187 SUPERFAMILY SSF46689 13 72 8.72E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_04940 7a02b347500d3805d2b36835c211ea1f 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 9.6E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_05155 36b88cc830c0753a5538491f70d1602c 542 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 11-10-2018 IPR020845 AMP-binding, conserved site IX88_05155 36b88cc830c0753a5538491f70d1602c 542 SUPERFAMILY SSF56801 9 540 3.79E-147 T 11-10-2018 IX88_05155 36b88cc830c0753a5538491f70d1602c 542 Gene3D G3DSA:3.30.300.310 441 542 2.5E-34 T 11-10-2018 IX88_05155 36b88cc830c0753a5538491f70d1602c 542 Gene3D G3DSA:3.40.50.12780 7 440 8.5E-110 T 11-10-2018 IX88_05155 36b88cc830c0753a5538491f70d1602c 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 528 7.7E-20 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IX88_05155 36b88cc830c0753a5538491f70d1602c 542 Pfam PF00501 AMP-binding enzyme 25 445 1.2E-99 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IX88_15225 af7188ab5f829f5e724bf69f5c09868e 256 SMART SM00382 26 213 3.7E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_15225 af7188ab5f829f5e724bf69f5c09868e 256 Pfam PF00005 ABC transporter 17 164 7.5E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_15225 af7188ab5f829f5e724bf69f5c09868e 256 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_15225 af7188ab5f829f5e724bf69f5c09868e 256 Gene3D G3DSA:3.40.50.300 1 252 7.9E-70 T 11-10-2018 IX88_15225 af7188ab5f829f5e724bf69f5c09868e 256 SUPERFAMILY SSF52540 2 228 4.67E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_03535 71f698d387d38e5aefc3f60685b83369 305 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 1.3E-80 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 IX88_03535 71f698d387d38e5aefc3f60685b83369 305 Gene3D G3DSA:3.30.160.40 219 304 1.7E-28 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 IX88_03535 71f698d387d38e5aefc3f60685b83369 305 PIRSF PIRSF001438 1 305 1.8E-123 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 IX88_03535 71f698d387d38e5aefc3f60685b83369 305 Gene3D G3DSA:3.40.190.10 4 208 6.0E-87 T 11-10-2018 IX88_03535 71f698d387d38e5aefc3f60685b83369 305 Gene3D G3DSA:3.40.190.10 101 200 6.0E-87 T 11-10-2018 IX88_03535 71f698d387d38e5aefc3f60685b83369 305 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 225 293 9.7E-19 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 IX88_03535 71f698d387d38e5aefc3f60685b83369 305 SUPERFAMILY SSF53850 2 216 8.36E-87 T 11-10-2018 IX88_03535 71f698d387d38e5aefc3f60685b83369 305 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 IX88_03535 71f698d387d38e5aefc3f60685b83369 305 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 39.442 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 IX88_03535 71f698d387d38e5aefc3f60685b83369 305 SUPERFAMILY SSF54782 219 304 1.15E-25 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 IX88_03535 71f698d387d38e5aefc3f60685b83369 305 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 1.0E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 IX88_03535 71f698d387d38e5aefc3f60685b83369 305 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 1.0E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 IX88_03535 71f698d387d38e5aefc3f60685b83369 305 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 1.0E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 IX88_03535 71f698d387d38e5aefc3f60685b83369 305 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 1.0E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 IX88_03535 71f698d387d38e5aefc3f60685b83369 305 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 1.0E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 IX88_03535 71f698d387d38e5aefc3f60685b83369 305 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 295 1.1E-115 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 IX88_15175 0d37093af844a55a91ece5fe89404aae 531 Pfam PF00005 ABC transporter 338 486 3.4E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_15175 0d37093af844a55a91ece5fe89404aae 531 Gene3D G3DSA:3.40.50.300 322 529 5.0E-63 T 11-10-2018 IX88_15175 0d37093af844a55a91ece5fe89404aae 531 SUPERFAMILY SSF52540 317 525 4.57E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_15175 0d37093af844a55a91ece5fe89404aae 531 Pfam PF00664 ABC transporter transmembrane region 58 275 4.0E-8 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 IX88_15175 0d37093af844a55a91ece5fe89404aae 531 SUPERFAMILY SSF90123 22 315 3.27E-22 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IX88_15175 0d37093af844a55a91ece5fe89404aae 531 SMART SM00382 346 529 2.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_15175 0d37093af844a55a91ece5fe89404aae 531 Gene3D G3DSA:1.20.1560.10 5 314 6.0E-15 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 IX88_15175 0d37093af844a55a91ece5fe89404aae 531 ProSitePatterns PS00211 ABC transporters family signature. 458 472 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_10570 4dc7bc773ff78508b49c929f925462c9 725 Gene3D G3DSA:2.170.130.10 50 177 4.4E-22 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_10570 4dc7bc773ff78508b49c929f925462c9 725 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 168 5.6E-10 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_10570 4dc7bc773ff78508b49c929f925462c9 725 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 708 725 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site IX88_10570 4dc7bc773ff78508b49c929f925462c9 725 SUPERFAMILY SSF56935 32 725 6.99E-100 T 11-10-2018 IX88_10570 4dc7bc773ff78508b49c929f925462c9 725 Gene3D G3DSA:2.40.170.20 178 725 1.3E-82 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IX88_10570 4dc7bc773ff78508b49c929f925462c9 725 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 71 725 6.5E-117 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 IX88_10570 4dc7bc773ff78508b49c929f925462c9 725 Pfam PF00593 TonB dependent receptor 261 723 6.3E-40 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_13100 935ea90292649c9281de5c8b38fe26c9 285 SUPERFAMILY SSF103481 38 135 7.45E-11 T 11-10-2018 IX88_13100 935ea90292649c9281de5c8b38fe26c9 285 Pfam PF00892 EamA-like transporter family 2 132 1.0E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_13100 935ea90292649c9281de5c8b38fe26c9 285 Pfam PF00892 EamA-like transporter family 148 280 8.6E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_13100 935ea90292649c9281de5c8b38fe26c9 285 SUPERFAMILY SSF103481 182 282 2.22E-6 T 11-10-2018 IX88_09730 aeb75a12311a81cb76e1b5afc6393bf1 127 Gene3D G3DSA:3.30.56.110 8 127 1.7E-50 T 11-10-2018 IX88_09730 aeb75a12311a81cb76e1b5afc6393bf1 127 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 13 126 2.2E-50 T 11-10-2018 IPR018714 Protein of unknown function DUF2237 IX88_06285 6053c8197cfa74e9125aa8f5fc9a6389 286 Gene3D G3DSA:2.60.120.10 33 280 1.2E-76 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_06285 6053c8197cfa74e9125aa8f5fc9a6389 286 Pfam PF02678 Pirin 25 127 4.8E-30 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 IX88_06285 6053c8197cfa74e9125aa8f5fc9a6389 286 SUPERFAMILY SSF51182 22 284 4.65E-72 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_06285 6053c8197cfa74e9125aa8f5fc9a6389 286 Pfam PF05726 Pirin C-terminal cupin domain 182 285 7.5E-24 T 11-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 IX88_06285 6053c8197cfa74e9125aa8f5fc9a6389 286 Gene3D G3DSA:2.60.120.10 149 254 1.2E-76 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_06285 6053c8197cfa74e9125aa8f5fc9a6389 286 PIRSF PIRSF006232 4 286 3.5E-79 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 IX88_09200 8f0df52c0b412bc41e7e750cfa9bbdec 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.7E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_09200 8f0df52c0b412bc41e7e750cfa9bbdec 296 Gene3D G3DSA:1.10.10.10 3 88 1.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_09200 8f0df52c0b412bc41e7e750cfa9bbdec 296 Pfam PF03466 LysR substrate binding domain 88 290 1.9E-31 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_09200 8f0df52c0b412bc41e7e750cfa9bbdec 296 Gene3D G3DSA:3.40.190.290 91 292 3.4E-49 T 11-10-2018 IX88_09200 8f0df52c0b412bc41e7e750cfa9bbdec 296 SUPERFAMILY SSF46785 4 84 5.44E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_09200 8f0df52c0b412bc41e7e750cfa9bbdec 296 SUPERFAMILY SSF53850 90 292 6.62E-36 T 11-10-2018 IX88_04575 6fa6b08d4ea350dde8cbd45cc37b68b5 173 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 152 3.7E-62 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 IX88_04575 6fa6b08d4ea350dde8cbd45cc37b68b5 173 Pfam PF01625 Peptide methionine sulfoxide reductase 3 153 1.7E-65 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 IX88_04575 6fa6b08d4ea350dde8cbd45cc37b68b5 173 SUPERFAMILY SSF55068 1 163 1.05E-73 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 IX88_04575 6fa6b08d4ea350dde8cbd45cc37b68b5 173 Gene3D G3DSA:3.30.1060.10 1 159 1.8E-72 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 IX88_04575 6fa6b08d4ea350dde8cbd45cc37b68b5 173 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 157 37.498 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 IX88_07825 fbe94aa693c1d9fb6c4a91b92f46c59d 314 Gene3D G3DSA:3.10.20.30 218 314 8.9E-24 T 11-10-2018 IPR012675 Beta-grasp domain superfamily IX88_07825 fbe94aa693c1d9fb6c4a91b92f46c59d 314 Gene3D G3DSA:2.40.30.10 1 96 7.9E-27 T 11-10-2018 IX88_07825 fbe94aa693c1d9fb6c4a91b92f46c59d 314 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 231 305 1.9E-12 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 IX88_07825 fbe94aa693c1d9fb6c4a91b92f46c59d 314 SUPERFAMILY SSF54292 206 313 1.04E-25 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 IX88_07825 fbe94aa693c1d9fb6c4a91b92f46c59d 314 SUPERFAMILY SSF52343 93 222 1.03E-25 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_07825 fbe94aa693c1d9fb6c4a91b92f46c59d 314 PRINTS PR00409 Phthalate dioxygenase reductase family signature 107 126 3.8E-52 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_07825 fbe94aa693c1d9fb6c4a91b92f46c59d 314 PRINTS PR00409 Phthalate dioxygenase reductase family signature 184 192 3.8E-52 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_07825 fbe94aa693c1d9fb6c4a91b92f46c59d 314 PRINTS PR00409 Phthalate dioxygenase reductase family signature 71 85 3.8E-52 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_07825 fbe94aa693c1d9fb6c4a91b92f46c59d 314 PRINTS PR00409 Phthalate dioxygenase reductase family signature 25 35 3.8E-52 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_07825 fbe94aa693c1d9fb6c4a91b92f46c59d 314 PRINTS PR00409 Phthalate dioxygenase reductase family signature 47 61 3.8E-52 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_07825 fbe94aa693c1d9fb6c4a91b92f46c59d 314 PRINTS PR00409 Phthalate dioxygenase reductase family signature 132 141 3.8E-52 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_07825 fbe94aa693c1d9fb6c4a91b92f46c59d 314 PRINTS PR00409 Phthalate dioxygenase reductase family signature 35 47 3.8E-52 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_07825 fbe94aa693c1d9fb6c4a91b92f46c59d 314 PRINTS PR00409 Phthalate dioxygenase reductase family signature 85 99 3.8E-52 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 IX88_07825 fbe94aa693c1d9fb6c4a91b92f46c59d 314 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 263 271 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 IX88_07825 fbe94aa693c1d9fb6c4a91b92f46c59d 314 SUPERFAMILY SSF63380 2 95 1.51E-24 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel IX88_07825 fbe94aa693c1d9fb6c4a91b92f46c59d 314 Gene3D G3DSA:3.40.50.80 97 216 2.9E-24 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_02595 63e74b56877cc05997a59767e4ccaf45 430 Pfam PF01943 Polysaccharide biosynthesis protein 15 265 6.0E-10 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 IX88_02595 63e74b56877cc05997a59767e4ccaf45 430 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 337 420 1.6E-7 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain IX88_09510 3f6e41676b60d5495d7f26bb86d661c5 309 SUPERFAMILY SSF103481 192 289 7.85E-12 T 11-10-2018 IX88_09510 3f6e41676b60d5495d7f26bb86d661c5 309 Pfam PF00892 EamA-like transporter family 11 141 6.1E-21 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_09510 3f6e41676b60d5495d7f26bb86d661c5 309 Pfam PF00892 EamA-like transporter family 156 289 3.9E-22 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_09510 3f6e41676b60d5495d7f26bb86d661c5 309 SUPERFAMILY SSF103481 48 145 2.09E-13 T 11-10-2018 IX88_04920 23ef058fbd111a5c8acc67e8fd79b1ab 338 Gene3D G3DSA:1.10.3730.40 182 338 2.8E-72 T 11-10-2018 IX88_04920 23ef058fbd111a5c8acc67e8fd79b1ab 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 45.023 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 IX88_04920 23ef058fbd111a5c8acc67e8fd79b1ab 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 1.0E-60 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 IX88_04920 23ef058fbd111a5c8acc67e8fd79b1ab 338 SUPERFAMILY SSF48179 183 332 3.57E-67 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_04920 23ef058fbd111a5c8acc67e8fd79b1ab 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 9.2E-76 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 IX88_04920 23ef058fbd111a5c8acc67e8fd79b1ab 338 PIRSF PIRSF000116 201 333 2.0E-13 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 IX88_04920 23ef058fbd111a5c8acc67e8fd79b1ab 338 PIRSF PIRSF000116 2 203 1.4E-52 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 IX88_04920 23ef058fbd111a5c8acc67e8fd79b1ab 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 2.1E-132 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 IX88_04920 23ef058fbd111a5c8acc67e8fd79b1ab 338 Gene3D G3DSA:3.40.50.720 1 181 2.9E-79 T 11-10-2018 IX88_04920 23ef058fbd111a5c8acc67e8fd79b1ab 338 SUPERFAMILY SSF51735 1 182 4.16E-75 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_11115 b6c0e855de751ded5e842c780ab72e76 339 Pfam PF01497 Periplasmic binding protein 53 285 6.3E-31 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain IX88_11115 b6c0e855de751ded5e842c780ab72e76 339 SUPERFAMILY SSF53807 38 330 1.06E-47 T 11-10-2018 IX88_11115 b6c0e855de751ded5e842c780ab72e76 339 Gene3D G3DSA:3.40.50.1980 21 339 2.1E-60 T 11-10-2018 IX88_17575 247ddff0cbd76826eb67ed670d62457b 176 Pfam PF03724 META domain 67 172 2.3E-14 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ IX88_17575 247ddff0cbd76826eb67ed670d62457b 176 Gene3D G3DSA:2.40.128.270 63 175 5.5E-9 T 11-10-2018 IPR038670 HslJ-like superfamily IX88_11985 562b6a4268de8b0d54f44d61ac850ccd 416 PIRSF PIRSF038800 1 407 5.5E-143 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 IX88_11985 562b6a4268de8b0d54f44d61ac850ccd 416 TIGRFAM TIGR01814 kynureninase: kynureninase 10 399 1.1E-100 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 IX88_11985 562b6a4268de8b0d54f44d61ac850ccd 416 Gene3D G3DSA:3.40.640.10 41 303 2.8E-158 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_11985 562b6a4268de8b0d54f44d61ac850ccd 416 Pfam PF00266 Aminotransferase class-V 79 321 1.8E-15 T 11-10-2018 IPR000192 Aminotransferase class V domain IX88_11985 562b6a4268de8b0d54f44d61ac850ccd 416 SUPERFAMILY SSF53383 3 398 1.46E-77 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_11985 562b6a4268de8b0d54f44d61ac850ccd 416 Hamap MF_01970 Kynureninase [kynU]. 1 399 33.453 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 IX88_11985 562b6a4268de8b0d54f44d61ac850ccd 416 Gene3D G3DSA:3.90.1150.10 11 399 2.8E-158 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_09800 f3030a9c2709d8ab90fdaaf11b569581 336 SUPERFAMILY SSF52540 52 155 8.7E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_09800 f3030a9c2709d8ab90fdaaf11b569581 336 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 6 336 34.345 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 IX88_09800 f3030a9c2709d8ab90fdaaf11b569581 336 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 26 329 1.7E-67 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 IX88_09800 f3030a9c2709d8ab90fdaaf11b569581 336 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 17 329 3.4E-97 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 IX88_13120 9f09d384c610a501bc4d8adc8b5f5c56 157 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 10 134 7.4E-42 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 IX88_13120 9f09d384c610a501bc4d8adc8b5f5c56 157 SUPERFAMILY SSF52540 23 126 3.22E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_13120 9f09d384c610a501bc4d8adc8b5f5c56 157 Gene3D G3DSA:3.40.50.300 3 154 3.3E-41 T 11-10-2018 IX88_13120 9f09d384c610a501bc4d8adc8b5f5c56 157 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 131 8.8E-39 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 IX88_00550 c2abc95941656109f400470564ba4078 301 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 13 299 19.043 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_00550 c2abc95941656109f400470564ba4078 301 Gene3D G3DSA:3.30.2350.10 3 247 2.5E-92 T 11-10-2018 IX88_00550 c2abc95941656109f400470564ba4078 301 SUPERFAMILY SSF55120 12 243 6.62E-81 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_00550 c2abc95941656109f400470564ba4078 301 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 184 245 1.7E-12 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 IX88_00550 c2abc95941656109f400470564ba4078 301 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 14 221 1.9E-77 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_00550 c2abc95941656109f400470564ba4078 301 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 247 298 3.3E-6 T 11-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_00550 c2abc95941656109f400470564ba4078 301 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 35 183 8.9E-61 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 IX88_06505 ff043e5507331cfcabe04d67b285947c 371 Gene3D G3DSA:3.30.9.10 88 307 4.6E-77 T 11-10-2018 IX88_06505 ff043e5507331cfcabe04d67b285947c 371 SUPERFAMILY SSF51905 1 365 5.57E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_06505 ff043e5507331cfcabe04d67b285947c 371 Pfam PF01266 FAD dependent oxidoreductase 2 346 1.7E-59 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 IX88_06505 ff043e5507331cfcabe04d67b285947c 371 SUPERFAMILY SSF54373 221 306 1.23E-20 T 11-10-2018 IX88_06505 ff043e5507331cfcabe04d67b285947c 371 Gene3D G3DSA:3.50.50.60 3 348 4.6E-77 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_18245 1391bed96c6dae8f11f8236d78a55a32 496 Pfam PF00743 Flavin-binding monooxygenase-like 78 348 4.1E-16 T 11-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 IX88_18245 1391bed96c6dae8f11f8236d78a55a32 496 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 174 198 3.6E-5 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_18245 1391bed96c6dae8f11f8236d78a55a32 496 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 3.6E-5 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_18245 1391bed96c6dae8f11f8236d78a55a32 496 SUPERFAMILY SSF51905 1 301 2.09E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_18245 1391bed96c6dae8f11f8236d78a55a32 496 Gene3D G3DSA:3.50.50.60 300 477 3.3E-9 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_18245 1391bed96c6dae8f11f8236d78a55a32 496 Pfam PF13450 NAD(P)-binding Rossmann-like domain 9 62 9.4E-8 T 11-10-2018 IX88_18245 1391bed96c6dae8f11f8236d78a55a32 496 Gene3D G3DSA:3.50.50.60 1 157 1.2E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_18245 1391bed96c6dae8f11f8236d78a55a32 496 Gene3D G3DSA:3.50.50.60 158 251 2.5E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_18245 1391bed96c6dae8f11f8236d78a55a32 496 SUPERFAMILY SSF51905 281 415 8.81E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_15855 67701f1a915a8d951f385e56c12722c9 335 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 147 155 - T 11-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 IX88_15855 67701f1a915a8d951f385e56c12722c9 335 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 21 327 1.7E-144 T 11-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 IX88_15855 67701f1a915a8d951f385e56c12722c9 335 Gene3D G3DSA:3.40.190.10 116 326 2.2E-130 T 11-10-2018 IX88_15855 67701f1a915a8d951f385e56c12722c9 335 Pfam PF13531 Bacterial extracellular solute-binding protein 47 281 7.4E-43 T 11-10-2018 IX88_15855 67701f1a915a8d951f385e56c12722c9 335 SUPERFAMILY SSF53850 21 328 7.48E-84 T 11-10-2018 IX88_15855 67701f1a915a8d951f385e56c12722c9 335 Gene3D G3DSA:3.40.190.10 28 296 2.2E-130 T 11-10-2018 IX88_05135 4c259be8d971d06c09d33a76e5848c22 282 Gene3D G3DSA:3.30.1300.10 178 282 1.4E-28 T 11-10-2018 IX88_05135 4c259be8d971d06c09d33a76e5848c22 282 SUPERFAMILY SSF52374 1 278 4.56E-106 T 11-10-2018 IX88_05135 4c259be8d971d06c09d33a76e5848c22 282 Hamap MF_00158 Pantothenate synthetase [panC]. 2 277 40.718 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 IX88_05135 4c259be8d971d06c09d33a76e5848c22 282 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 277 1.1E-98 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 IX88_05135 4c259be8d971d06c09d33a76e5848c22 282 Gene3D G3DSA:3.40.50.620 1 177 6.7E-76 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_05135 4c259be8d971d06c09d33a76e5848c22 282 Pfam PF02569 Pantoate-beta-alanine ligase 5 275 3.1E-104 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 IX88_05135 4c259be8d971d06c09d33a76e5848c22 282 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 68 1.1E-9 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 IX88_02900 63db7a6cbfbb1f6b7b38cd1f40adca0a 254 Gene3D G3DSA:3.90.470.20 25 231 1.0E-42 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IX88_02900 63db7a6cbfbb1f6b7b38cd1f40adca0a 254 Gene3D G3DSA:3.90.470.20 111 221 1.0E-42 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IX88_02900 63db7a6cbfbb1f6b7b38cd1f40adca0a 254 SUPERFAMILY SSF56214 110 226 6.1E-19 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IX88_02900 63db7a6cbfbb1f6b7b38cd1f40adca0a 254 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 111 206 2.3E-14 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IX88_02900 63db7a6cbfbb1f6b7b38cd1f40adca0a 254 SUPERFAMILY SSF56214 7 102 8.37E-19 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IX88_04690 c2107d37a309bc9985ab25d26041d22d 437 Gene3D G3DSA:3.40.50.300 53 313 3.9E-111 T 11-10-2018 IX88_04690 c2107d37a309bc9985ab25d26041d22d 437 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 407 1.6E-204 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 IX88_04690 c2107d37a309bc9985ab25d26041d22d 437 SUPERFAMILY SSF52540 58 398 1.2E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04690 c2107d37a309bc9985ab25d26041d22d 437 SUPERFAMILY SSF57716 9 44 1.71E-10 T 11-10-2018 IX88_04690 c2107d37a309bc9985ab25d26041d22d 437 SMART SM00382 110 331 1.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_04690 c2107d37a309bc9985ab25d26041d22d 437 SMART SM01086 315 409 3.9E-33 T 11-10-2018 IPR019489 Clp ATPase, C-terminal IX88_04690 c2107d37a309bc9985ab25d26041d22d 437 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 315 390 6.4E-15 T 11-10-2018 IPR019489 Clp ATPase, C-terminal IX88_04690 c2107d37a309bc9985ab25d26041d22d 437 SMART SM00994 8 47 1.4E-19 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 IX88_04690 c2107d37a309bc9985ab25d26041d22d 437 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 413 52.65 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 IX88_04690 c2107d37a309bc9985ab25d26041d22d 437 Gene3D G3DSA:1.10.8.60 314 422 2.9E-38 T 11-10-2018 IX88_04690 c2107d37a309bc9985ab25d26041d22d 437 Pfam PF07724 AAA domain (Cdc48 subfamily) 111 309 2.9E-51 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IX88_04690 c2107d37a309bc9985ab25d26041d22d 437 Gene3D G3DSA:3.30.50.30 2 47 9.4E-17 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily IX88_04690 c2107d37a309bc9985ab25d26041d22d 437 Pfam PF06689 ClpX C4-type zinc finger 9 45 1.8E-17 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 IX88_03270 20f855481cc9a09a09ee171612906515 739 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 736 33.069 T 11-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 IX88_03270 20f855481cc9a09a09ee171612906515 739 Gene3D G3DSA:3.90.199.10 33 484 2.3E-175 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 IX88_03270 20f855481cc9a09a09ee171612906515 739 Gene3D G3DSA:3.30.1360.40 239 332 2.3E-175 T 11-10-2018 IX88_03270 20f855481cc9a09a09ee171612906515 739 Gene3D G3DSA:1.10.268.10 370 455 2.3E-175 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 IX88_03270 20f855481cc9a09a09ee171612906515 739 SUPERFAMILY SSF56719 32 484 2.75E-153 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 IX88_03270 20f855481cc9a09a09ee171612906515 739 SMART SM00434 12 462 4.0E-219 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IX88_03270 20f855481cc9a09a09ee171612906515 739 Gene3D G3DSA:2.120.10.90 501 736 3.5E-13 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal IX88_03270 20f855481cc9a09a09ee171612906515 739 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 735 2.6E-303 T 11-10-2018 IX88_03270 20f855481cc9a09a09ee171612906515 739 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 621 4.1 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 IX88_03270 20f855481cc9a09a09ee171612906515 739 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 689 2.3E-6 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 IX88_03270 20f855481cc9a09a09ee171612906515 739 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 469 5.5E-135 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 IX88_03270 20f855481cc9a09a09ee171612906515 739 SUPERFAMILY SSF101904 498 735 8.76E-46 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal IX88_07300 7a03b73a1ca6d47250b2bb14daa183ba 247 ProSitePatterns PS00893 Nudix box signature. 154 175 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 IX88_07300 7a03b73a1ca6d47250b2bb14daa183ba 247 Gene3D G3DSA:3.90.79.20 3 119 2.5E-21 T 11-10-2018 IX88_07300 7a03b73a1ca6d47250b2bb14daa183ba 247 Gene3D G3DSA:3.90.79.10 120 247 3.1E-38 T 11-10-2018 IX88_07300 7a03b73a1ca6d47250b2bb14daa183ba 247 SUPERFAMILY SSF55811 72 239 2.75E-44 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 IX88_07300 7a03b73a1ca6d47250b2bb14daa183ba 247 Pfam PF00293 NUDIX domain 126 230 5.4E-17 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 IX88_07300 7a03b73a1ca6d47250b2bb14daa183ba 247 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 87 118 2.2E-12 T 11-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 IX88_06015 3e2b9b58e273e51209988eccc70a9057 244 Gene3D G3DSA:3.40.50.1820 49 238 1.2E-20 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_06015 3e2b9b58e273e51209988eccc70a9057 244 SUPERFAMILY SSF53474 7 238 1.72E-16 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_05175 5928aad6268d8285215ed0305da905a2 142 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 4 113 5.0E-8 T 11-10-2018 IPR020143 Uncharacterised protein family, RP436 IX88_05175 5928aad6268d8285215ed0305da905a2 142 Pfam PF09335 SNARE associated Golgi protein 36 133 2.6E-13 T 11-10-2018 IPR032816 SNARE associated Golgi protein IX88_09630 8206e8bee9a391c9cc5041816e4b36a2 248 Pfam PF09992 Phosphodiester glycosidase 74 222 2.7E-21 T 11-10-2018 IPR018711 Phosphodiester glycosidase IX88_01290 e66828454be4ba821bcf391221ea9425 1165 Gene3D G3DSA:3.40.50.2300 1040 1158 7.6E-17 T 11-10-2018 IX88_01290 e66828454be4ba821bcf391221ea9425 1165 Gene3D G3DSA:1.10.287.130 770 867 7.8E-12 T 11-10-2018 IX88_01290 e66828454be4ba821bcf391221ea9425 1165 SMART SM00388 804 869 2.2E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_01290 e66828454be4ba821bcf391221ea9425 1165 SUPERFAMILY SSF55785 642 764 1.22E-10 T 11-10-2018 IPR035965 PAS domain superfamily IX88_01290 e66828454be4ba821bcf391221ea9425 1165 PRINTS PR00344 Bacterial sensor protein C-terminal signature 987 1005 9.5E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_01290 e66828454be4ba821bcf391221ea9425 1165 PRINTS PR00344 Bacterial sensor protein C-terminal signature 952 966 9.5E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_01290 e66828454be4ba821bcf391221ea9425 1165 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1011 1024 9.5E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 IX88_01290 e66828454be4ba821bcf391221ea9425 1165 Gene3D G3DSA:3.30.565.10 868 1027 3.5E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_01290 e66828454be4ba821bcf391221ea9425 1165 Gene3D G3DSA:1.20.1730.10 38 522 5.9E-18 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily IX88_01290 e66828454be4ba821bcf391221ea9425 1165 SMART SM00387 913 1027 1.0E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_01290 e66828454be4ba821bcf391221ea9425 1165 Pfam PF00512 His Kinase A (phospho-acceptor) domain 804 869 7.0E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_01290 e66828454be4ba821bcf391221ea9425 1165 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 914 1024 3.8E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_01290 e66828454be4ba821bcf391221ea9425 1165 SUPERFAMILY SSF55874 860 1029 7.33E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_01290 e66828454be4ba821bcf391221ea9425 1165 Pfam PF00072 Response regulator receiver domain 1048 1153 5.7E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_01290 e66828454be4ba821bcf391221ea9425 1165 SUPERFAMILY SSF47384 792 869 1.43E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IX88_01290 e66828454be4ba821bcf391221ea9425 1165 SUPERFAMILY SSF52172 1046 1156 2.13E-14 T 11-10-2018 IPR011006 CheY-like superfamily IX88_01290 e66828454be4ba821bcf391221ea9425 1165 Pfam PF12860 PAS fold 657 770 6.4E-43 T 11-10-2018 IX88_01290 e66828454be4ba821bcf391221ea9425 1165 SMART SM00448 1046 1155 6.0E-8 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_01290 e66828454be4ba821bcf391221ea9425 1165 Gene3D G3DSA:3.30.450.20 639 769 3.1E-13 T 11-10-2018 IX88_11595 5a33ab0cb7be4812b304a2d83afecdce 209 Pfam PF00775 Dioxygenase 43 199 6.9E-20 T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 IX88_11595 5a33ab0cb7be4812b304a2d83afecdce 209 Gene3D G3DSA:2.60.130.10 1 209 7.5E-86 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 IX88_11595 5a33ab0cb7be4812b304a2d83afecdce 209 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 12 209 1.6E-85 T 11-10-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 IX88_11595 5a33ab0cb7be4812b304a2d83afecdce 209 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 55 83 - T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 IX88_11595 5a33ab0cb7be4812b304a2d83afecdce 209 SUPERFAMILY SSF49482 9 209 9.94E-63 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 IX88_17810 48699c59348a86ac820badffa9576db8 162 Pfam PF04461 Protein of unknown function (DUF520) 2 161 2.7E-62 T 11-10-2018 IPR007551 Protein of unknown function DUF520 IX88_17810 48699c59348a86ac820badffa9576db8 162 Gene3D G3DSA:3.30.70.860 96 162 9.8E-30 T 11-10-2018 IPR035571 UPF0234-like, C-terminal IX88_17810 48699c59348a86ac820badffa9576db8 162 SUPERFAMILY SSF89963 2 87 1.88E-28 T 11-10-2018 IPR036183 YajQ-like superfamily IX88_17810 48699c59348a86ac820badffa9576db8 162 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 162 25.752 T 11-10-2018 IPR007551 Protein of unknown function DUF520 IX88_17810 48699c59348a86ac820badffa9576db8 162 SUPERFAMILY SSF89963 90 162 1.2E-27 T 11-10-2018 IPR036183 YajQ-like superfamily IX88_17810 48699c59348a86ac820badffa9576db8 162 Gene3D G3DSA:3.30.70.990 9 95 1.9E-28 T 11-10-2018 IPR035570 UPF0234, N-terminal IX88_03125 f55f2fee6c7f8540c18593e1e9a4cf07 176 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 161 1.6E-57 T 11-10-2018 IPR023635 Peptide deformylase IX88_03125 f55f2fee6c7f8540c18593e1e9a4cf07 176 Pfam PF01327 Polypeptide deformylase 5 153 1.0E-52 T 11-10-2018 IPR023635 Peptide deformylase IX88_03125 f55f2fee6c7f8540c18593e1e9a4cf07 176 PRINTS PR01576 Peptide deformylase signature 102 120 1.2E-37 T 11-10-2018 IPR023635 Peptide deformylase IX88_03125 f55f2fee6c7f8540c18593e1e9a4cf07 176 PRINTS PR01576 Peptide deformylase signature 33 62 1.2E-37 T 11-10-2018 IPR023635 Peptide deformylase IX88_03125 f55f2fee6c7f8540c18593e1e9a4cf07 176 PRINTS PR01576 Peptide deformylase signature 90 101 1.2E-37 T 11-10-2018 IPR023635 Peptide deformylase IX88_03125 f55f2fee6c7f8540c18593e1e9a4cf07 176 PRINTS PR01576 Peptide deformylase signature 121 150 1.2E-37 T 11-10-2018 IPR023635 Peptide deformylase IX88_03125 f55f2fee6c7f8540c18593e1e9a4cf07 176 PIRSF PIRSF004749 1 175 3.3E-58 T 11-10-2018 IPR023635 Peptide deformylase IX88_03125 f55f2fee6c7f8540c18593e1e9a4cf07 176 Hamap MF_00163 Peptide deformylase [def]. 2 163 31.537 T 11-10-2018 IPR023635 Peptide deformylase IX88_03125 f55f2fee6c7f8540c18593e1e9a4cf07 176 SUPERFAMILY SSF56420 2 165 1.96E-62 T 11-10-2018 IPR036821 Peptide deformylase superfamily IX88_03125 f55f2fee6c7f8540c18593e1e9a4cf07 176 Gene3D G3DSA:3.90.45.10 1 168 4.4E-66 T 11-10-2018 IPR036821 Peptide deformylase superfamily IX88_07195 5094009fbb7e6470b48a9bd12e481ce8 260 Gene3D G3DSA:3.30.1450.10 44 126 9.3E-7 T 11-10-2018 IPR037873 BamE-like IX88_07195 5094009fbb7e6470b48a9bd12e481ce8 260 Pfam PF04355 SmpA / OmlA family 49 113 1.9E-11 T 11-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 IX88_07195 5094009fbb7e6470b48a9bd12e481ce8 260 SUPERFAMILY SSF103088 147 259 2.75E-22 T 11-10-2018 IPR036737 OmpA-like domain superfamily IX88_07195 5094009fbb7e6470b48a9bd12e481ce8 260 Pfam PF00691 OmpA family 163 240 2.4E-14 T 11-10-2018 IPR006665 OmpA-like domain IX88_07195 5094009fbb7e6470b48a9bd12e481ce8 260 PRINTS PR01021 OMPA domain signature 199 215 1.4E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_07195 5094009fbb7e6470b48a9bd12e481ce8 260 PRINTS PR01021 OMPA domain signature 153 175 1.4E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_07195 5094009fbb7e6470b48a9bd12e481ce8 260 PRINTS PR01021 OMPA domain signature 184 199 1.4E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_07195 5094009fbb7e6470b48a9bd12e481ce8 260 Gene3D G3DSA:3.30.1330.60 130 260 2.1E-26 T 11-10-2018 IPR036737 OmpA-like domain superfamily IX88_17340 fb37dde63d874756ad02ba99b1f9d69b 274 SUPERFAMILY SSF46946 128 220 7.59E-29 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 IX88_17340 fb37dde63d874756ad02ba99b1f9d69b 274 Gene3D G3DSA:3.20.190.10 2 125 4.3E-35 T 11-10-2018 IPR035937 MutM-like, N-terminal IX88_17340 fb37dde63d874756ad02ba99b1f9d69b 274 SUPERFAMILY SSF81624 2 136 1.44E-36 T 11-10-2018 IPR035937 MutM-like, N-terminal IX88_17340 fb37dde63d874756ad02ba99b1f9d69b 274 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 216 1.5E-26 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 IX88_17340 fb37dde63d874756ad02ba99b1f9d69b 274 Gene3D G3DSA:1.10.8.50 129 267 1.6E-45 T 11-10-2018 IX88_17340 fb37dde63d874756ad02ba99b1f9d69b 274 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 111 3.0E-27 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 IX88_17340 fb37dde63d874756ad02ba99b1f9d69b 274 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 267 39.535 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 IX88_17340 fb37dde63d874756ad02ba99b1f9d69b 274 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 266 9.6E-87 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 IX88_17340 fb37dde63d874756ad02ba99b1f9d69b 274 SUPERFAMILY SSF57716 215 267 2.02E-15 T 11-10-2018 IX88_17340 fb37dde63d874756ad02ba99b1f9d69b 274 SMART SM00898 2 113 8.5E-45 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 IX88_17340 fb37dde63d874756ad02ba99b1f9d69b 274 Pfam PF06827 Zinc finger found in FPG and IleRS 239 267 4.3E-8 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 IX88_17340 fb37dde63d874756ad02ba99b1f9d69b 274 SMART SM01232 127 219 1.5E-43 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 IX88_14355 b8d5e365ceff8c7234ee79f6840ed66e 210 Gene3D G3DSA:3.40.50.1820 1 209 1.9E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_14355 b8d5e365ceff8c7234ee79f6840ed66e 210 SUPERFAMILY SSF53474 3 207 1.1E-34 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_13155 a5ac99905dd3d97f5f279ea1a9cfac64 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.6E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_13155 a5ac99905dd3d97f5f279ea1a9cfac64 306 SUPERFAMILY SSF46785 1 112 3.14E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_13155 a5ac99905dd3d97f5f279ea1a9cfac64 306 Gene3D G3DSA:3.40.190.10 90 292 4.2E-68 T 11-10-2018 IX88_13155 a5ac99905dd3d97f5f279ea1a9cfac64 306 Gene3D G3DSA:3.40.190.10 163 271 4.2E-68 T 11-10-2018 IX88_13155 a5ac99905dd3d97f5f279ea1a9cfac64 306 Gene3D G3DSA:1.10.10.10 1 89 1.0E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_13155 a5ac99905dd3d97f5f279ea1a9cfac64 306 SUPERFAMILY SSF53850 89 293 3.39E-34 T 11-10-2018 IX88_13155 a5ac99905dd3d97f5f279ea1a9cfac64 306 Pfam PF03466 LysR substrate binding domain 90 293 2.5E-34 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_09780 eaac0b78ff0ad3add087d69003a3d2c9 295 SMART SM00470 39 131 1.1E-30 T 11-10-2018 IPR003115 ParB/Sulfiredoxin IX88_09780 eaac0b78ff0ad3add087d69003a3d2c9 295 Gene3D G3DSA:1.10.10.2830 118 231 1.4E-36 T 11-10-2018 IX88_09780 eaac0b78ff0ad3add087d69003a3d2c9 295 Pfam PF02195 ParB-like nuclease domain 40 131 3.1E-26 T 11-10-2018 IPR003115 ParB/Sulfiredoxin IX88_09780 eaac0b78ff0ad3add087d69003a3d2c9 295 SUPERFAMILY SSF109709 124 232 2.88E-35 T 11-10-2018 IX88_09780 eaac0b78ff0ad3add087d69003a3d2c9 295 Gene3D G3DSA:3.90.1530.30 52 117 1.3E-27 T 11-10-2018 IX88_09780 eaac0b78ff0ad3add087d69003a3d2c9 295 SUPERFAMILY SSF110849 39 133 3.4E-28 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily IX88_09780 eaac0b78ff0ad3add087d69003a3d2c9 295 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 215 3.6E-57 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 IX88_12030 a17d5642270db3a30113982d44e6e436 160 Gene3D G3DSA:1.10.10.10 111 158 1.1E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_12030 a17d5642270db3a30113982d44e6e436 160 Gene3D G3DSA:1.10.10.10 21 65 1.1E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_12030 a17d5642270db3a30113982d44e6e436 160 Pfam PF02631 RecX family 45 157 8.5E-29 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 IX88_12030 a17d5642270db3a30113982d44e6e436 160 Hamap MF_01114 Regulatory protein RecX [recX]. 17 160 13.326 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 IX88_12030 a17d5642270db3a30113982d44e6e436 160 Gene3D G3DSA:1.10.10.10 67 110 2.7E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_04330 86ddeb7e074eecf10295fe389d33a50d 299 Gene3D G3DSA:3.40.190.10 94 291 1.1E-51 T 11-10-2018 IX88_04330 86ddeb7e074eecf10295fe389d33a50d 299 Gene3D G3DSA:1.10.10.10 1 93 1.4E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_04330 86ddeb7e074eecf10295fe389d33a50d 299 Pfam PF03466 LysR substrate binding domain 89 290 2.5E-35 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_04330 86ddeb7e074eecf10295fe389d33a50d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_04330 86ddeb7e074eecf10295fe389d33a50d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_04330 86ddeb7e074eecf10295fe389d33a50d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_04330 86ddeb7e074eecf10295fe389d33a50d 299 Gene3D G3DSA:3.40.190.10 163 267 1.1E-51 T 11-10-2018 IX88_04330 86ddeb7e074eecf10295fe389d33a50d 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.0E-22 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_04330 86ddeb7e074eecf10295fe389d33a50d 299 SUPERFAMILY SSF53850 91 292 9.77E-34 T 11-10-2018 IX88_04330 86ddeb7e074eecf10295fe389d33a50d 299 SUPERFAMILY SSF46785 1 86 4.24E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_09870 46fd9ecad23fbd8ab25f25f462e33c90 147 SUPERFAMILY SSF55961 5 145 6.93E-17 T 11-10-2018 IX88_09870 46fd9ecad23fbd8ab25f25f462e33c90 147 Gene3D G3DSA:3.30.530.20 4 146 3.8E-15 T 11-10-2018 IPR023393 START-like domain superfamily IX88_09870 46fd9ecad23fbd8ab25f25f462e33c90 147 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 6 143 3.3E-8 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase IX88_04845 a40bc56eb6c9604dd219cc8a91e2b1ca 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 5 84 5.8E-32 T 11-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 IX88_04845 a40bc56eb6c9604dd219cc8a91e2b1ca 85 Pfam PF00462 Glutaredoxin 5 65 1.8E-22 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 IX88_04845 a40bc56eb6c9604dd219cc8a91e2b1ca 85 SUPERFAMILY SSF52833 3 84 7.23E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_04845 a40bc56eb6c9604dd219cc8a91e2b1ca 85 ProSitePatterns PS00195 Glutaredoxin active site. 7 23 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 IX88_04845 a40bc56eb6c9604dd219cc8a91e2b1ca 85 Gene3D G3DSA:3.40.30.10 2 85 1.6E-30 T 11-10-2018 IX88_04845 a40bc56eb6c9604dd219cc8a91e2b1ca 85 PRINTS PR00160 Glutaredoxin signature 48 61 1.7E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup IX88_04845 a40bc56eb6c9604dd219cc8a91e2b1ca 85 PRINTS PR00160 Glutaredoxin signature 5 23 1.7E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup IX88_04845 a40bc56eb6c9604dd219cc8a91e2b1ca 85 PRINTS PR00160 Glutaredoxin signature 62 75 1.7E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup IX88_13615 29fe11eaa88ffcc8a9dc270e4024c2c1 467 SMART SM00388 236 302 3.2E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_13615 29fe11eaa88ffcc8a9dc270e4024c2c1 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 301 2.0E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 IX88_13615 29fe11eaa88ffcc8a9dc270e4024c2c1 467 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 7 458 4.3E-105 T 11-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 IX88_13615 29fe11eaa88ffcc8a9dc270e4024c2c1 467 SUPERFAMILY SSF55874 307 459 1.96E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_13615 29fe11eaa88ffcc8a9dc270e4024c2c1 467 SUPERFAMILY SSF47384 220 300 4.32E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 IX88_13615 29fe11eaa88ffcc8a9dc270e4024c2c1 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 458 1.8E-11 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_13615 29fe11eaa88ffcc8a9dc270e4024c2c1 467 Gene3D G3DSA:1.10.287.130 186 304 3.3E-19 T 11-10-2018 IX88_13615 29fe11eaa88ffcc8a9dc270e4024c2c1 467 SMART SM00387 346 461 5.2E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase IX88_13615 29fe11eaa88ffcc8a9dc270e4024c2c1 467 Gene3D G3DSA:3.30.565.10 306 461 5.1E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_13255 9061ba971d4f635f3580fc3239bc98d8 126 Gene3D G3DSA:3.30.1130.10 1 121 1.7E-32 T 11-10-2018 IX88_13255 9061ba971d4f635f3580fc3239bc98d8 126 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 3 114 7.7E-25 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 IX88_13255 9061ba971d4f635f3580fc3239bc98d8 126 SMART SM00905 4 115 1.4E-37 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 IX88_13255 9061ba971d4f635f3580fc3239bc98d8 126 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.4E-28 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 IX88_13255 9061ba971d4f635f3580fc3239bc98d8 126 TIGRFAM TIGR00526 folB_dom: FolB domain 1 119 1.2E-27 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 IX88_13255 9061ba971d4f635f3580fc3239bc98d8 126 SUPERFAMILY SSF55620 1 117 2.39E-30 T 11-10-2018 IX88_14645 9fe0a1b41f5b222d5a7f46cd2c0fe1ad 337 Pfam PF04055 Radical SAM superfamily 88 249 9.6E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 IX88_14645 9fe0a1b41f5b222d5a7f46cd2c0fe1ad 337 Gene3D G3DSA:3.20.20.70 81 273 1.3E-21 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_14645 9fe0a1b41f5b222d5a7f46cd2c0fe1ad 337 SUPERFAMILY SSF102114 49 313 4.58E-65 T 11-10-2018 IX88_14645 9fe0a1b41f5b222d5a7f46cd2c0fe1ad 337 TIGRFAM TIGR00510 lipA: lipoyl synthase 31 310 4.5E-122 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 IX88_14645 9fe0a1b41f5b222d5a7f46cd2c0fe1ad 337 Hamap MF_00206 Lipoyl synthase [lipA]. 1 322 150.295 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 IX88_14645 9fe0a1b41f5b222d5a7f46cd2c0fe1ad 337 PIRSF PIRSF005963 1 334 1.3E-128 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 IX88_14645 9fe0a1b41f5b222d5a7f46cd2c0fe1ad 337 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 34 70 7.6E-7 T 11-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 IX88_14645 9fe0a1b41f5b222d5a7f46cd2c0fe1ad 337 SMART SM00729 81 286 4.8E-20 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 IX88_17010 c7f6d80cd2896424d59a159c91cd9d3c 272 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 265 18.303 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 IX88_17010 c7f6d80cd2896424d59a159c91cd9d3c 272 Pfam PF02673 Bacitracin resistance protein BacA 9 260 8.7E-85 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 IX88_17010 c7f6d80cd2896424d59a159c91cd9d3c 272 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 258 2.0E-78 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 IX88_16120 b6b4e8d75529d899bf69d3d9e7e417fc 373 Gene3D G3DSA:2.40.50.100 87 285 3.5E-32 T 11-10-2018 IX88_16120 b6b4e8d75529d899bf69d3d9e7e417fc 373 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 79 315 5.4E-13 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IX88_16120 b6b4e8d75529d899bf69d3d9e7e417fc 373 SUPERFAMILY SSF111369 78 140 3.14E-6 T 11-10-2018 IX88_16120 b6b4e8d75529d899bf69d3d9e7e417fc 373 SUPERFAMILY SSF111369 209 310 9.94E-9 T 11-10-2018 IX88_16120 b6b4e8d75529d899bf69d3d9e7e417fc 373 Gene3D G3DSA:1.10.287.470 121 250 3.5E-32 T 11-10-2018 IX88_16120 b6b4e8d75529d899bf69d3d9e7e417fc 373 Gene3D G3DSA:2.40.30.170 78 365 3.5E-32 T 11-10-2018 IX88_02565 e60e12f57878d11500a00864683bd557 231 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 28 131 5.4E-28 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 IX88_02565 e60e12f57878d11500a00864683bd557 231 Gene3D G3DSA:3.10.50.40 123 230 8.7E-43 T 11-10-2018 IX88_02565 e60e12f57878d11500a00864683bd557 231 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 138 226 8.5E-28 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain IX88_02565 e60e12f57878d11500a00864683bd557 231 PRINTS PR01730 Macrophage infectivity potentiator signature 73 87 2.5E-5 T 11-10-2018 IPR008104 Macrophage infectivity potentiator GO:0003755|GO:0016020 IX88_02565 e60e12f57878d11500a00864683bd557 231 PRINTS PR01730 Macrophage infectivity potentiator signature 24 38 2.5E-5 T 11-10-2018 IPR008104 Macrophage infectivity potentiator GO:0003755|GO:0016020 IX88_02565 e60e12f57878d11500a00864683bd557 231 PRINTS PR01730 Macrophage infectivity potentiator signature 91 110 2.5E-5 T 11-10-2018 IPR008104 Macrophage infectivity potentiator GO:0003755|GO:0016020 IX88_02565 e60e12f57878d11500a00864683bd557 231 SUPERFAMILY SSF54534 31 229 4.52E-61 T 11-10-2018 IX88_02565 e60e12f57878d11500a00864683bd557 231 Gene3D G3DSA:1.10.287.460 24 122 3.5E-25 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 IX88_03240 c5e525ecf75d3116fde492390ae48c65 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 1.9E-7 T 11-10-2018 IX88_03240 c5e525ecf75d3116fde492390ae48c65 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 1.9E-7 T 11-10-2018 IX88_03240 c5e525ecf75d3116fde492390ae48c65 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 1.9E-7 T 11-10-2018 IX88_03240 c5e525ecf75d3116fde492390ae48c65 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 1.9E-7 T 11-10-2018 IX88_03240 c5e525ecf75d3116fde492390ae48c65 463 Gene3D G3DSA:1.20.1720.10 16 205 4.7E-47 T 11-10-2018 IX88_03240 c5e525ecf75d3116fde492390ae48c65 463 SUPERFAMILY SSF103473 8 460 1.57E-64 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_03240 c5e525ecf75d3116fde492390ae48c65 463 Pfam PF07690 Major Facilitator Superfamily 22 412 1.8E-49 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_03240 c5e525ecf75d3116fde492390ae48c65 463 Gene3D G3DSA:1.20.1250.20 255 461 8.0E-17 T 11-10-2018 IX88_03240 c5e525ecf75d3116fde492390ae48c65 463 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 422 5.0E-80 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 IX88_16225 4b96b41e79dde23feaac2cd0f432f51f 263 SUPERFAMILY SSF53927 10 262 5.72E-76 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 IX88_16225 4b96b41e79dde23feaac2cd0f432f51f 263 Pfam PF02634 FdhD/NarQ family 29 262 5.4E-67 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 IX88_16225 4b96b41e79dde23feaac2cd0f432f51f 263 Gene3D G3DSA:3.40.140.10 122 263 5.2E-45 T 11-10-2018 IX88_16225 4b96b41e79dde23feaac2cd0f432f51f 263 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 5 263 29.139 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 IX88_16225 4b96b41e79dde23feaac2cd0f432f51f 263 Gene3D G3DSA:3.10.20.10 31 116 2.0E-5 T 11-10-2018 IX88_16225 4b96b41e79dde23feaac2cd0f432f51f 263 PIRSF PIRSF015626 4 263 8.7E-76 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 IX88_16225 4b96b41e79dde23feaac2cd0f432f51f 263 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 25 262 6.3E-68 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 SUPERFAMILY SSF101967 394 502 8.11E-14 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 SUPERFAMILY SSF101967 1263 1395 3.79E-5 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Pfam PF03895 YadA-like membrane anchor domain 1817 1869 7.4E-8 T 11-10-2018 IPR005594 YadA-like, C-terminal IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 SUPERFAMILY SSF101967 1532 1568 1.7E-6 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Pfam PF05658 Head domain of trimeric autotransporter adhesin 299 321 5.2E-4 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Pfam PF05658 Head domain of trimeric autotransporter adhesin 585 610 2.7E-4 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Pfam PF05658 Head domain of trimeric autotransporter adhesin 239 265 7.9E-6 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Pfam PF05658 Head domain of trimeric autotransporter adhesin 461 482 7.0E-5 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Pfam PF05658 Head domain of trimeric autotransporter adhesin 268 293 3.7E-5 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Pfam PF05658 Head domain of trimeric autotransporter adhesin 190 214 7.4E-8 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 2.0E-9 T 11-10-2018 IPR024973 ESPR domain IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Gene3D G3DSA:2.150.10.10 523 612 1.2E-10 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Gene3D G3DSA:2.150.10.10 381 522 3.3E-19 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1176 1216 2.7E-7 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1616 1658 9.3E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 967 1007 1.9E-9 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1233 1269 6.1E-4 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1700 1738 0.0095 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1370 1409 7.1E-5 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1547 1577 8.0E-8 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 352 376 1.6E-5 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 748 789 2.0E-8 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 SUPERFAMILY SSF101967 516 623 6.28E-11 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Gene3D G3DSA:2.150.10.10 613 780 3.0E-37 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Gene3D G3DSA:2.150.10.10 103 231 3.2E-13 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 SUPERFAMILY SSF101967 928 990 5.36E-10 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Gene3D G3DSA:1.20.5.170 1236 1280 2.4E-5 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Gene3D G3DSA:1.20.5.170 1372 1459 9.3E-6 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Gene3D G3DSA:1.20.5.170 1693 1797 1.9E-6 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 SUPERFAMILY SSF54523 1780 1869 1.57E-16 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 SUPERFAMILY SSF101967 237 374 4.58E-26 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Gene3D G3DSA:3.30.390.90 934 972 1.2E-18 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Gene3D G3DSA:3.30.390.90 1513 1552 2.6E-16 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Gene3D G3DSA:3.30.390.90 1143 1181 4.2E-19 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Gene3D G3DSA:3.30.390.90 1336 1371 1.5E-17 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Gene3D G3DSA:1.20.5.170 1616 1664 2.8E-10 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Gene3D G3DSA:2.40.128.100 815 933 2.7E-8 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Gene3D G3DSA:2.40.128.100 1009 1142 3.4E-7 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Gene3D G3DSA:3.30.1300.30 1798 1871 3.2E-9 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 SUPERFAMILY SSF101967 122 216 1.57E-10 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 Gene3D G3DSA:2.150.10.10 232 375 4.5E-32 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 SUPERFAMILY SSF101967 1130 1198 1.28E-9 T 11-10-2018 IX88_07180 46f7db4c7851a6387f03f2aa9fc5a6ca 1873 SUPERFAMILY SSF101967 614 770 9.42E-29 T 11-10-2018 IX88_03455 58d71f9e52554141dbab6ea73a550b68 448 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 445 1.9E-120 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_03455 58d71f9e52554141dbab6ea73a550b68 448 Gene3D G3DSA:3.40.50.720 8 93 3.1E-22 T 11-10-2018 IX88_03455 58d71f9e52554141dbab6ea73a550b68 448 SUPERFAMILY SSF51984 10 94 6.02E-18 T 11-10-2018 IX88_03455 58d71f9e52554141dbab6ea73a550b68 448 SUPERFAMILY SSF53623 96 300 5.49E-53 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IX88_03455 58d71f9e52554141dbab6ea73a550b68 448 Pfam PF02875 Mur ligase family, glutamate ligase domain 304 383 8.9E-8 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 IX88_03455 58d71f9e52554141dbab6ea73a550b68 448 Pfam PF08245 Mur ligase middle domain 110 282 2.7E-26 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 IX88_03455 58d71f9e52554141dbab6ea73a550b68 448 Gene3D G3DSA:3.40.1190.10 94 302 1.0E-63 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IX88_03455 58d71f9e52554141dbab6ea73a550b68 448 Gene3D G3DSA:3.90.190.20 303 443 2.8E-43 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IX88_03455 58d71f9e52554141dbab6ea73a550b68 448 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 447 33.626 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_03455 58d71f9e52554141dbab6ea73a550b68 448 SUPERFAMILY SSF53244 302 447 3.36E-42 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IX88_04040 cd3620460f7cacb186751478b38c144f 437 SUPERFAMILY SSF51905 7 395 2.25E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_04040 cd3620460f7cacb186751478b38c144f 437 Pfam PF01494 FAD binding domain 7 334 9.0E-22 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 IX88_04040 cd3620460f7cacb186751478b38c144f 437 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 309 325 1.4E-13 T 11-10-2018 IX88_04040 cd3620460f7cacb186751478b38c144f 437 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.4E-13 T 11-10-2018 IX88_04040 cd3620460f7cacb186751478b38c144f 437 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 309 1.4E-13 T 11-10-2018 IX88_04040 cd3620460f7cacb186751478b38c144f 437 Gene3D G3DSA:3.30.9.30 38 288 3.7E-52 T 11-10-2018 IX88_04040 cd3620460f7cacb186751478b38c144f 437 Gene3D G3DSA:3.50.50.60 7 352 3.7E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_04400 b777b9856e859f458e4de8d9ec99eced 73 SUPERFAMILY SSF50249 4 71 4.0E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_04400 b777b9856e859f458e4de8d9ec99eced 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 2 73 27.121 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 IX88_04400 b777b9856e859f458e4de8d9ec99eced 73 Gene3D G3DSA:2.40.50.140 2 71 2.0E-37 T 11-10-2018 IX88_04400 b777b9856e859f458e4de8d9ec99eced 73 Pfam PF01176 Translation initiation factor 1A / IF-1 8 71 1.4E-28 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 IX88_04400 b777b9856e859f458e4de8d9ec99eced 73 SMART SM00316 5 73 1.9E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 IX88_04400 b777b9856e859f458e4de8d9ec99eced 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 4 71 2.3E-38 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 IX88_00100 08f4885e201b1c8b060ee623838fd856 101 SUPERFAMILY SSF57716 2 101 9.27E-39 T 11-10-2018 IX88_00100 08f4885e201b1c8b060ee623838fd856 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00100 08f4885e201b1c8b060ee623838fd856 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.764 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid IX88_00100 08f4885e201b1c8b060ee623838fd856 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 2.4E-25 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00100 08f4885e201b1c8b060ee623838fd856 101 Gene3D G3DSA:4.10.830.10 41 101 7.9E-22 T 11-10-2018 IX88_11925 e1a679c16b0b91fe2b8c60c9543eb473 315 SUPERFAMILY SSF53613 4 291 1.47E-62 T 11-10-2018 IPR029056 Ribokinase-like IX88_11925 e1a679c16b0b91fe2b8c60c9543eb473 315 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 305 1.2E-99 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 IX88_11925 e1a679c16b0b91fe2b8c60c9543eb473 315 Pfam PF00294 pfkB family carbohydrate kinase 13 291 4.9E-45 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB IX88_11925 e1a679c16b0b91fe2b8c60c9543eb473 315 PIRSF PIRSF000535 1 308 2.3E-86 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 IX88_11925 e1a679c16b0b91fe2b8c60c9543eb473 315 Gene3D G3DSA:3.40.1190.20 1 307 3.6E-89 T 11-10-2018 IPR029056 Ribokinase-like IX88_11925 e1a679c16b0b91fe2b8c60c9543eb473 315 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 IX88_11925 e1a679c16b0b91fe2b8c60c9543eb473 315 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 IX88_11925 e1a679c16b0b91fe2b8c60c9543eb473 315 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 4 305 2.2E-101 T 11-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 IX88_09695 c9c8927d86dac61f72deedd72fa09b46 178 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 178 2.1E-53 T 11-10-2018 IPR018636 Protein of unknown function DUF2058 IX88_05375 8fe60c4498d1b2a40a9d3df6679a8630 429 SUPERFAMILY SSF53720 27 428 1.61E-88 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_05375 8fe60c4498d1b2a40a9d3df6679a8630 429 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 2.6E-78 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 IX88_05375 8fe60c4498d1b2a40a9d3df6679a8630 429 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 2.6E-78 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 IX88_05375 8fe60c4498d1b2a40a9d3df6679a8630 429 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 2.6E-78 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 IX88_05375 8fe60c4498d1b2a40a9d3df6679a8630 429 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 2.6E-78 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 IX88_05375 8fe60c4498d1b2a40a9d3df6679a8630 429 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 2.6E-78 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 IX88_05375 8fe60c4498d1b2a40a9d3df6679a8630 429 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 2.6E-78 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 IX88_05375 8fe60c4498d1b2a40a9d3df6679a8630 429 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 2.6E-78 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 IX88_05375 8fe60c4498d1b2a40a9d3df6679a8630 429 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 2.6E-78 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 IX88_05375 8fe60c4498d1b2a40a9d3df6679a8630 429 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 428 40.562 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 IX88_05375 8fe60c4498d1b2a40a9d3df6679a8630 429 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 427 1.1E-160 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 IX88_05375 8fe60c4498d1b2a40a9d3df6679a8630 429 Gene3D G3DSA:3.40.50.1980 234 350 1.7E-124 T 11-10-2018 IX88_05375 8fe60c4498d1b2a40a9d3df6679a8630 429 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 IX88_05375 8fe60c4498d1b2a40a9d3df6679a8630 429 PIRSF PIRSF000099 1 429 9.0E-157 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 IX88_05375 8fe60c4498d1b2a40a9d3df6679a8630 429 Gene3D G3DSA:3.40.50.1980 31 232 1.7E-124 T 11-10-2018 IX88_05375 8fe60c4498d1b2a40a9d3df6679a8630 429 Pfam PF00815 Histidinol dehydrogenase 25 427 8.4E-168 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 IX88_14070 3b174634954b6ee43cd139785a5dfd29 482 Pfam PF17289 Terminase RNaseH-like domain 304 455 4.2E-18 T 11-10-2018 IPR035421 Terminase, large subunit gp17-like IX88_14070 3b174634954b6ee43cd139785a5dfd29 482 Gene3D G3DSA:3.30.420.280 274 465 9.1E-54 T 11-10-2018 IX88_14070 3b174634954b6ee43cd139785a5dfd29 482 Gene3D G3DSA:3.40.50.300 1 235 7.8E-6 T 11-10-2018 IX88_14070 3b174634954b6ee43cd139785a5dfd29 482 Pfam PF03237 Terminase-like family 50 285 1.5E-15 T 11-10-2018 IPR004921 Terminase large subunit, T4likevirus-type IX88_00350 2306fe9a35a9f69e6f6c11235ecf4e19 420 Gene3D G3DSA:3.20.20.70 45 193 4.5E-10 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_00350 2306fe9a35a9f69e6f6c11235ecf4e19 420 Gene3D G3DSA:1.10.150.320 312 376 7.9E-7 T 11-10-2018 IX88_00350 2306fe9a35a9f69e6f6c11235ecf4e19 420 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 5 418 1.3E-208 T 11-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative IX88_00350 2306fe9a35a9f69e6f6c11235ecf4e19 420 SUPERFAMILY SSF102114 44 262 2.35E-14 T 11-10-2018 IX88_00350 2306fe9a35a9f69e6f6c11235ecf4e19 420 SUPERFAMILY SSF47781 303 383 9.12E-13 T 11-10-2018 IPR010994 RuvA domain 2-like IX88_15550 819090802d04eef9e76bd12b4090f835 920 SUPERFAMILY SSF63411 31 247 1.07E-50 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 IX88_15550 819090802d04eef9e76bd12b4090f835 920 Gene3D G3DSA:3.30.830.10 501 713 3.8E-27 T 11-10-2018 IX88_15550 819090802d04eef9e76bd12b4090f835 920 Gene3D G3DSA:3.30.830.10 29 252 5.8E-55 T 11-10-2018 IX88_15550 819090802d04eef9e76bd12b4090f835 920 Gene3D G3DSA:3.30.830.10 262 453 8.1E-21 T 11-10-2018 IX88_15550 819090802d04eef9e76bd12b4090f835 920 Pfam PF05193 Peptidase M16 inactive domain 666 845 1.7E-25 T 11-10-2018 IPR007863 Peptidase M16, C-terminal IX88_15550 819090802d04eef9e76bd12b4090f835 920 Pfam PF05193 Peptidase M16 inactive domain 202 372 2.2E-17 T 11-10-2018 IPR007863 Peptidase M16, C-terminal IX88_15550 819090802d04eef9e76bd12b4090f835 920 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 65 88 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 IX88_15550 819090802d04eef9e76bd12b4090f835 920 SUPERFAMILY SSF63411 488 716 1.75E-32 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 IX88_15550 819090802d04eef9e76bd12b4090f835 920 Gene3D G3DSA:3.30.830.10 714 915 3.4E-36 T 11-10-2018 IX88_15550 819090802d04eef9e76bd12b4090f835 920 SUPERFAMILY SSF63411 747 913 1.22E-26 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 IX88_15550 819090802d04eef9e76bd12b4090f835 920 SUPERFAMILY SSF63411 261 431 8.5E-16 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 IX88_15550 819090802d04eef9e76bd12b4090f835 920 Pfam PF00675 Insulinase (Peptidase family M16) 63 188 5.0E-17 T 11-10-2018 IPR011765 Peptidase M16, N-terminal IX88_14555 040e37f31ed7491f37acb8c42d9fc961 270 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 270 120.713 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 IX88_14555 040e37f31ed7491f37acb8c42d9fc961 270 TIGRFAM TIGR03138 QueF: queuine synthase 3 270 1.1E-113 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 IX88_14555 040e37f31ed7491f37acb8c42d9fc961 270 Gene3D G3DSA:3.30.1130.10 132 270 4.2E-55 T 11-10-2018 IX88_14555 040e37f31ed7491f37acb8c42d9fc961 270 SUPERFAMILY SSF55620 169 253 6.08E-11 T 11-10-2018 IX88_14555 040e37f31ed7491f37acb8c42d9fc961 270 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 14 122 1.3E-37 T 11-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 IX88_14555 040e37f31ed7491f37acb8c42d9fc961 270 Gene3D G3DSA:3.30.1130.10 14 130 3.1E-40 T 11-10-2018 IX88_14555 040e37f31ed7491f37acb8c42d9fc961 270 PIRSF PIRSF004750 1 270 4.0E-110 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 IX88_14555 040e37f31ed7491f37acb8c42d9fc961 270 Pfam PF14489 QueF-like protein 183 254 2.0E-21 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 IX88_09330 e6a9bd8c07866b3609c56bd23441c80e 129 Pfam PF14552 Tautomerase enzyme 38 114 1.3E-25 T 11-10-2018 IPR037479 Tautomerase, MSAD family IX88_09330 e6a9bd8c07866b3609c56bd23441c80e 129 Gene3D G3DSA:3.30.429.10 2 129 1.0E-41 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily IX88_09330 e6a9bd8c07866b3609c56bd23441c80e 129 SUPERFAMILY SSF55331 4 121 2.86E-32 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily IX88_11600 6fe5d840ebce80a64f1a3849ee1f533d 241 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 81 109 - T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 IX88_11600 6fe5d840ebce80a64f1a3849ee1f533d 241 Pfam PF00775 Dioxygenase 47 229 1.0E-45 T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 IX88_11600 6fe5d840ebce80a64f1a3849ee1f533d 241 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 11 42 6.7E-15 T 11-10-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 IX88_11600 6fe5d840ebce80a64f1a3849ee1f533d 241 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 17 238 8.6E-107 T 11-10-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 IX88_11600 6fe5d840ebce80a64f1a3849ee1f533d 241 SUPERFAMILY SSF49482 9 238 5.1E-73 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 IX88_11600 6fe5d840ebce80a64f1a3849ee1f533d 241 Gene3D G3DSA:2.60.130.10 1 241 1.0E-101 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 IX88_09390 afc7c3c1ed7b63f51ce974171ed337b9 470 SUPERFAMILY SSF51679 8 437 1.15E-118 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 IX88_09390 afc7c3c1ed7b63f51ce974171ed337b9 470 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 11 434 1.2E-155 T 11-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 IX88_09390 afc7c3c1ed7b63f51ce974171ed337b9 470 PIRSF PIRSF000337 6 448 1.6E-129 T 11-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 IX88_09390 afc7c3c1ed7b63f51ce974171ed337b9 470 Gene3D G3DSA:3.20.20.30 5 457 4.1E-140 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 IX88_09390 afc7c3c1ed7b63f51ce974171ed337b9 470 Pfam PF00296 Luciferase-like monooxygenase 31 384 1.4E-57 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 IX88_04240 baa761bfd27ff54ffd5f70b4029ce27f 84 SUPERFAMILY SSF143800 1 80 6.28E-22 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_04240 baa761bfd27ff54ffd5f70b4029ce27f 84 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 7.2E-17 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_04240 baa761bfd27ff54ffd5f70b4029ce27f 84 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.58 T 11-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_04240 baa761bfd27ff54ffd5f70b4029ce27f 84 Pfam PF01197 Ribosomal protein L31 1 78 6.0E-24 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_04240 baa761bfd27ff54ffd5f70b4029ce27f 84 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_04240 baa761bfd27ff54ffd5f70b4029ce27f 84 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.7E-14 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_04240 baa761bfd27ff54ffd5f70b4029ce27f 84 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.7E-14 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_04240 baa761bfd27ff54ffd5f70b4029ce27f 84 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.7E-14 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_04240 baa761bfd27ff54ffd5f70b4029ce27f 84 Gene3D G3DSA:2.30.170.50 1 83 3.4E-22 T 11-10-2018 IX88_05370 c8ce78a6c9c087848def0e099b14ab56 227 Pfam PF01634 ATP phosphoribosyltransferase 70 221 6.8E-50 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 IX88_05370 c8ce78a6c9c087848def0e099b14ab56 227 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 21 201 1.3E-57 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 IX88_05370 c8ce78a6c9c087848def0e099b14ab56 227 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 20 225 54.449 T 11-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 IX88_05370 c8ce78a6c9c087848def0e099b14ab56 227 Gene3D G3DSA:3.40.190.10 22 211 2.4E-70 T 11-10-2018 IX88_05370 c8ce78a6c9c087848def0e099b14ab56 227 SUPERFAMILY SSF53850 19 224 1.93E-64 T 11-10-2018 IX88_05370 c8ce78a6c9c087848def0e099b14ab56 227 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 160 181 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 IX88_05370 c8ce78a6c9c087848def0e099b14ab56 227 Gene3D G3DSA:3.40.190.10 112 193 2.4E-70 T 11-10-2018 IX88_01465 48497e04e407a8531dfc0410e686a01d 365 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 6 362 4.1E-105 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_01465 48497e04e407a8531dfc0410e686a01d 365 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 195 354 1.8E-36 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 IX88_01465 48497e04e407a8531dfc0410e686a01d 365 Gene3D G3DSA:3.40.50.2000 9 186 3.0E-61 T 11-10-2018 IX88_01465 48497e04e407a8531dfc0410e686a01d 365 Gene3D G3DSA:3.40.50.2000 187 349 3.0E-46 T 11-10-2018 IX88_01465 48497e04e407a8531dfc0410e686a01d 365 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 12 148 2.3E-41 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_01465 48497e04e407a8531dfc0410e686a01d 365 SUPERFAMILY SSF53756 10 364 5.8E-115 T 11-10-2018 IX88_01465 48497e04e407a8531dfc0410e686a01d 365 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 12 365 34.326 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_10480 4661785a6f4bbf8eb792c229b4ee0105 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 70 84 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 IX88_10480 4661785a6f4bbf8eb792c229b4ee0105 352 SUPERFAMILY SSF51735 148 316 3.27E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_10480 4661785a6f4bbf8eb792c229b4ee0105 352 Gene3D G3DSA:3.90.180.10 10 336 1.8E-91 T 11-10-2018 IX88_10480 4661785a6f4bbf8eb792c229b4ee0105 352 Pfam PF00107 Zinc-binding dehydrogenase 184 311 1.4E-26 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 IX88_10480 4661785a6f4bbf8eb792c229b4ee0105 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 143 2.9E-22 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 IX88_10480 4661785a6f4bbf8eb792c229b4ee0105 352 SMART SM00829 10 350 0.0037 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 IX88_10480 4661785a6f4bbf8eb792c229b4ee0105 352 SUPERFAMILY SSF50129 1 181 2.28E-41 T 11-10-2018 IPR011032 GroES-like superfamily IX88_10480 4661785a6f4bbf8eb792c229b4ee0105 352 Gene3D G3DSA:3.40.50.720 161 297 1.8E-91 T 11-10-2018 IX88_00565 986d320309f702c97dcfac8d904c3e9d 122 PRINTS PR00061 Ribosomal protein L19 signature 37 66 1.4E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00565 986d320309f702c97dcfac8d904c3e9d 122 PRINTS PR00061 Ribosomal protein L19 signature 91 116 1.4E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00565 986d320309f702c97dcfac8d904c3e9d 122 PRINTS PR00061 Ribosomal protein L19 signature 7 36 1.4E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00565 986d320309f702c97dcfac8d904c3e9d 122 SUPERFAMILY SSF50104 5 118 1.91E-47 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily IX88_00565 986d320309f702c97dcfac8d904c3e9d 122 Pfam PF01245 Ribosomal protein L19 7 116 1.6E-51 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00565 986d320309f702c97dcfac8d904c3e9d 122 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 7 116 1.3E-50 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00565 986d320309f702c97dcfac8d904c3e9d 122 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 5 117 31.074 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00565 986d320309f702c97dcfac8d904c3e9d 122 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00565 986d320309f702c97dcfac8d904c3e9d 122 Gene3D G3DSA:2.30.30.790 9 121 9.4E-16 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00565 986d320309f702c97dcfac8d904c3e9d 122 PIRSF PIRSF002191 1 122 2.0E-51 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_09090 b1cf34917424f7bfc44f2304a50abb1f 275 Gene3D G3DSA:3.90.226.10 6 264 8.2E-27 T 11-10-2018 IX88_09090 b1cf34917424f7bfc44f2304a50abb1f 275 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 13 274 2.2E-98 T 11-10-2018 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 IX88_09090 b1cf34917424f7bfc44f2304a50abb1f 275 SUPERFAMILY SSF52096 26 218 1.1E-20 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_09090 b1cf34917424f7bfc44f2304a50abb1f 275 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 23 274 1.2E-90 T 11-10-2018 IX88_08740 e1f2e2abaa56514ff1d765aa598b0f15 384 Gene3D G3DSA:1.10.540.10 7 119 2.1E-133 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_08740 e1f2e2abaa56514ff1d765aa598b0f15 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 IX88_08740 e1f2e2abaa56514ff1d765aa598b0f15 384 PIRSF PIRSF016578 109 364 3.0E-13 T 11-10-2018 IX88_08740 e1f2e2abaa56514ff1d765aa598b0f15 384 PIRSF PIRSF016578 4 86 4.9E-7 T 11-10-2018 IX88_08740 e1f2e2abaa56514ff1d765aa598b0f15 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 378 9.6E-49 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_08740 e1f2e2abaa56514ff1d765aa598b0f15 384 SUPERFAMILY SSF47203 229 381 1.03E-55 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_08740 e1f2e2abaa56514ff1d765aa598b0f15 384 SUPERFAMILY SSF56645 9 243 4.58E-80 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_08740 e1f2e2abaa56514ff1d765aa598b0f15 384 Gene3D G3DSA:1.20.140.10 230 375 2.1E-133 T 11-10-2018 IX88_08740 e1f2e2abaa56514ff1d765aa598b0f15 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 117 6.4E-30 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_08740 e1f2e2abaa56514ff1d765aa598b0f15 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 3.3E-29 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_08740 e1f2e2abaa56514ff1d765aa598b0f15 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 IX88_08740 e1f2e2abaa56514ff1d765aa598b0f15 384 Gene3D G3DSA:2.40.110.10 120 229 2.1E-133 T 11-10-2018 IX88_08130 3d39d81af0200e5b1a9bd76a035cfa8d 261 Pfam PF00106 short chain dehydrogenase 10 192 1.3E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08130 3d39d81af0200e5b1a9bd76a035cfa8d 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_08130 3d39d81af0200e5b1a9bd76a035cfa8d 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 5.2E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08130 3d39d81af0200e5b1a9bd76a035cfa8d 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.2E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08130 3d39d81af0200e5b1a9bd76a035cfa8d 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 5.2E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08130 3d39d81af0200e5b1a9bd76a035cfa8d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.1E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08130 3d39d81af0200e5b1a9bd76a035cfa8d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.1E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08130 3d39d81af0200e5b1a9bd76a035cfa8d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.1E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08130 3d39d81af0200e5b1a9bd76a035cfa8d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.1E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08130 3d39d81af0200e5b1a9bd76a035cfa8d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 3.1E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08130 3d39d81af0200e5b1a9bd76a035cfa8d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.1E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08130 3d39d81af0200e5b1a9bd76a035cfa8d 261 Gene3D G3DSA:3.40.50.720 1 260 2.1E-68 T 11-10-2018 IX88_08130 3d39d81af0200e5b1a9bd76a035cfa8d 261 SUPERFAMILY SSF51735 9 258 4.48E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_02000 3357bd50f5a33df125e231b9a2cd40f8 396 Pfam PF07690 Major Facilitator Superfamily 14 346 4.1E-31 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_02000 3357bd50f5a33df125e231b9a2cd40f8 396 Gene3D G3DSA:1.20.1250.20 1 382 7.5E-41 T 11-10-2018 IX88_02000 3357bd50f5a33df125e231b9a2cd40f8 396 SUPERFAMILY SSF103473 8 383 4.84E-52 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_08165 2a25ff2a92f076a378b5aa599d111cb1 133 Pfam PF09278 MerR, DNA binding 45 106 3.2E-15 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding IX88_08165 2a25ff2a92f076a378b5aa599d111cb1 133 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_08165 2a25ff2a92f076a378b5aa599d111cb1 133 SUPERFAMILY SSF46955 1 125 2.05E-35 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily IX88_08165 2a25ff2a92f076a378b5aa599d111cb1 133 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 2.3E-48 T 11-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 IX88_08165 2a25ff2a92f076a378b5aa599d111cb1 133 Gene3D G3DSA:1.10.1660.10 1 125 1.4E-33 T 11-10-2018 IX88_08165 2a25ff2a92f076a378b5aa599d111cb1 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.7E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_08165 2a25ff2a92f076a378b5aa599d111cb1 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.7E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_08165 2a25ff2a92f076a378b5aa599d111cb1 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.7E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_08165 2a25ff2a92f076a378b5aa599d111cb1 133 Pfam PF00376 MerR family regulatory protein 2 39 1.7E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_08165 2a25ff2a92f076a378b5aa599d111cb1 133 SMART SM00422 1 70 4.1E-29 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_04985 e8c3d76b16a75ebd402c8cc4ee5fd1be 254 Pfam PF00899 ThiF family 23 249 6.6E-37 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 IX88_04985 e8c3d76b16a75ebd402c8cc4ee5fd1be 254 SUPERFAMILY SSF69572 7 249 6.02E-60 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 IX88_04985 e8c3d76b16a75ebd402c8cc4ee5fd1be 254 Gene3D G3DSA:3.40.50.720 4 254 5.7E-90 T 11-10-2018 IX88_16240 5b98fbdf9f861ab290f4da87872aa37a 188 Gene3D G3DSA:1.10.10.60 5 51 9.4E-19 T 11-10-2018 IX88_16240 5b98fbdf9f861ab290f4da87872aa37a 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 1.8E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_16240 5b98fbdf9f861ab290f4da87872aa37a 188 SUPERFAMILY SSF46689 3 75 5.64E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_16240 5b98fbdf9f861ab290f4da87872aa37a 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 7.2E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_16240 5b98fbdf9f861ab290f4da87872aa37a 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 7.2E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_16240 5b98fbdf9f861ab290f4da87872aa37a 188 Gene3D G3DSA:1.10.357.10 52 183 2.1E-26 T 11-10-2018 IX88_16240 5b98fbdf9f861ab290f4da87872aa37a 188 SUPERFAMILY SSF48498 78 183 4.45E-19 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_01400 2b643e08314dd4db672f3ae7f20ee321 721 Gene3D G3DSA:2.170.130.10 53 182 7.7E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_01400 2b643e08314dd4db672f3ae7f20ee321 721 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 719 1.6E-95 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 IX88_01400 2b643e08314dd4db672f3ae7f20ee321 721 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 171 1.1E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_01400 2b643e08314dd4db672f3ae7f20ee321 721 Pfam PF00593 TonB dependent receptor 248 720 5.4E-54 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_01400 2b643e08314dd4db672f3ae7f20ee321 721 Gene3D G3DSA:2.40.170.20 183 721 4.3E-122 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IX88_01400 2b643e08314dd4db672f3ae7f20ee321 721 SUPERFAMILY SSF56935 33 721 2.02E-124 T 11-10-2018 IX88_03235 d8fc521c5a719f5e8f669e58d271bfd3 252 Pfam PF01183 Glycosyl hydrolases family 25 50 223 1.6E-45 T 11-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 IX88_03235 d8fc521c5a719f5e8f669e58d271bfd3 252 SMART SM00641 46 147 2.4E-14 T 11-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup IX88_03235 d8fc521c5a719f5e8f669e58d271bfd3 252 Gene3D G3DSA:3.20.20.80 32 246 3.3E-68 T 11-10-2018 IX88_03235 d8fc521c5a719f5e8f669e58d271bfd3 252 SUPERFAMILY SSF51445 43 245 1.61E-58 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily IX88_04535 0085f46dd607ca4be0ac10cf06490dfb 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 6.9E-25 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_04535 0085f46dd607ca4be0ac10cf06490dfb 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_04535 0085f46dd607ca4be0ac10cf06490dfb 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.385 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_04535 0085f46dd607ca4be0ac10cf06490dfb 51 Pfam PF00471 Ribosomal protein L33 4 49 6.1E-18 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_04535 0085f46dd607ca4be0ac10cf06490dfb 51 Gene3D G3DSA:2.20.28.120 1 51 2.9E-28 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_04535 0085f46dd607ca4be0ac10cf06490dfb 51 SUPERFAMILY SSF57829 1 49 1.28E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 IX88_15780 b5a737186fcec6f29e937f2098eb065a 241 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 5 237 4.1E-102 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 IX88_15780 b5a737186fcec6f29e937f2098eb065a 241 Gene3D G3DSA:3.20.20.70 1 241 3.6E-105 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_15780 b5a737186fcec6f29e937f2098eb065a 241 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 241 127.578 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 IX88_15780 b5a737186fcec6f29e937f2098eb065a 241 SUPERFAMILY SSF63892 3 238 2.48E-98 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 IX88_15780 b5a737186fcec6f29e937f2098eb065a 241 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 5 238 1.1E-96 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 IX88_16495 e99e367eee467f1abfd5b7dfe0d78d28 312 Pfam PF00781 Diacylglycerol kinase catalytic domain 7 133 2.5E-22 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 IX88_16495 e99e367eee467f1abfd5b7dfe0d78d28 312 Gene3D G3DSA:2.60.200.40 139 296 3.6E-17 T 11-10-2018 IX88_16495 e99e367eee467f1abfd5b7dfe0d78d28 312 SMART SM00046 6 138 1.7E-4 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 IX88_16495 e99e367eee467f1abfd5b7dfe0d78d28 312 SUPERFAMILY SSF111331 4 307 8.24E-56 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily IX88_16495 e99e367eee467f1abfd5b7dfe0d78d28 312 Gene3D G3DSA:3.40.50.10330 2 138 2.2E-24 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 IX88_02805 03ee42006fb29570a84bafc1f97e26f8 476 PIRSF PIRSF006060 3 475 1.4E-67 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_02805 03ee42006fb29570a84bafc1f97e26f8 476 Pfam PF00324 Amino acid permease 24 467 1.2E-103 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 IX88_02805 03ee42006fb29570a84bafc1f97e26f8 476 Gene3D G3DSA:1.20.1740.10 14 474 3.7E-63 T 11-10-2018 IX88_02805 03ee42006fb29570a84bafc1f97e26f8 476 ProSitePatterns PS00218 Amino acid permeases signature. 49 79 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 IX88_03585 026d0e19d91f59d7840f5ccf5f89429a 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 195 1.3E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IX88_03585 026d0e19d91f59d7840f5ccf5f89429a 222 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 12 220 2.1E-61 T 11-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 IX88_03585 026d0e19d91f59d7840f5ccf5f89429a 222 Gene3D G3DSA:3.40.50.1000 12 216 1.5E-63 T 11-10-2018 IPR023214 HAD superfamily IX88_03585 026d0e19d91f59d7840f5ccf5f89429a 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 195 2.9E-37 T 11-10-2018 IX88_03585 026d0e19d91f59d7840f5ccf5f89429a 222 SUPERFAMILY SSF56784 7 220 9.9E-58 T 11-10-2018 IPR036412 HAD-like superfamily IX88_03585 026d0e19d91f59d7840f5ccf5f89429a 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 189 1.3E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IX88_03585 026d0e19d91f59d7840f5ccf5f89429a 222 Gene3D G3DSA:1.10.150.240 24 94 1.5E-63 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IX88_07880 9076915853e226c3312a4886c2082c56 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 3.2E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07880 9076915853e226c3312a4886c2082c56 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.2E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07880 9076915853e226c3312a4886c2082c56 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 3.2E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07880 9076915853e226c3312a4886c2082c56 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 3.2E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07880 9076915853e226c3312a4886c2082c56 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 3.2E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07880 9076915853e226c3312a4886c2082c56 277 Pfam PF00106 short chain dehydrogenase 17 203 2.0E-47 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07880 9076915853e226c3312a4886c2082c56 277 SUPERFAMILY SSF51735 14 269 9.32E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_07880 9076915853e226c3312a4886c2082c56 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 2.3E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07880 9076915853e226c3312a4886c2082c56 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 2.3E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07880 9076915853e226c3312a4886c2082c56 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 2.3E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_07880 9076915853e226c3312a4886c2082c56 277 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_07880 9076915853e226c3312a4886c2082c56 277 Gene3D G3DSA:3.40.50.720 13 264 6.4E-65 T 11-10-2018 IX88_01725 efda705ef90fe2fa3d46d6499f9754d0 147 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 32.361 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 IX88_01725 efda705ef90fe2fa3d46d6499f9754d0 147 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 1.7E-50 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 IX88_01725 efda705ef90fe2fa3d46d6499f9754d0 147 SUPERFAMILY SSF69500 1 144 1.44E-54 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily IX88_01725 efda705ef90fe2fa3d46d6499f9754d0 147 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 2.3E-56 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 IX88_01725 efda705ef90fe2fa3d46d6499f9754d0 147 Gene3D G3DSA:3.50.80.10 1 145 3.8E-54 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily IX88_01280 1e7a151d8659557d3481b69ead644936 571 Pfam PF00474 Sodium:solute symporter family 68 489 4.5E-112 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 IX88_01280 1e7a151d8659557d3481b69ead644936 571 Gene3D G3DSA:1.20.1730.10 56 568 2.4E-62 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily IX88_01280 1e7a151d8659557d3481b69ead644936 571 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 68 489 1.1E-62 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 IX88_01280 1e7a151d8659557d3481b69ead644936 571 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 183 208 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site IX88_10270 38dc0837ffd6f628bce45b15978e8b24 391 SUPERFAMILY SSF53756 7 358 3.93E-28 T 11-10-2018 IX88_10270 38dc0837ffd6f628bce45b15978e8b24 391 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 5 390 36.064 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 IX88_10270 38dc0837ffd6f628bce45b15978e8b24 391 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 6 386 4.2E-105 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 IX88_10270 38dc0837ffd6f628bce45b15978e8b24 391 Gene3D G3DSA:3.40.50.2000 201 367 3.4E-6 T 11-10-2018 IX88_10270 38dc0837ffd6f628bce45b15978e8b24 391 Pfam PF02684 Lipid-A-disaccharide synthetase 8 373 1.2E-106 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 IX88_13405 f487ba1d616d0807554478ae39c7638c 127 Gene3D G3DSA:3.30.70.60 1 92 2.0E-29 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 IX88_13405 f487ba1d616d0807554478ae39c7638c 127 SUPERFAMILY SSF54995 1 101 5.76E-36 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13405 f487ba1d616d0807554478ae39c7638c 127 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 20.701 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 IX88_13405 f487ba1d616d0807554478ae39c7638c 127 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 5.1E-33 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13405 f487ba1d616d0807554478ae39c7638c 127 Pfam PF01250 Ribosomal protein S6 3 91 1.4E-24 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13405 f487ba1d616d0807554478ae39c7638c 127 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 11-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 IX88_15470 5b2b93a2fc47d78a3064596592ce1ccc 233 Pfam PF04402 Protein of unknown function (DUF541) 32 227 8.3E-25 T 11-10-2018 IPR007497 Protein of unknown function DUF541 IX88_15470 5b2b93a2fc47d78a3064596592ce1ccc 233 Gene3D G3DSA:3.30.70.2970 44 146 1.0E-19 T 11-10-2018 IX88_15470 5b2b93a2fc47d78a3064596592ce1ccc 233 Gene3D G3DSA:3.30.110.170 34 225 1.0E-19 T 11-10-2018 IX88_07410 af260c2c78f4d27c22850de61fee2421 96 ProDom PD069311 TRANSCRIPTIONAL ACTIVATOR PRTN TRANSCRIPTION PYOCIN BIOSYNTHESIS DNA-BINDING BACTERIOCIN REGULATOR REGULATOR 2 74 7.0E-4 T 11-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 IX88_07410 af260c2c78f4d27c22850de61fee2421 96 Pfam PF11112 Pyocin activator protein PrtN 7 78 9.1E-15 T 11-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 IX88_00140 774a2883ca33b13d52ae7b828a079092 109 Gene3D G3DSA:3.90.470.10 1 109 3.9E-45 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 IX88_00140 774a2883ca33b13d52ae7b828a079092 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.6E-46 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00140 774a2883ca33b13d52ae7b828a079092 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 25.555 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00140 774a2883ca33b13d52ae7b828a079092 109 SUPERFAMILY SSF54843 1 107 9.29E-42 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 IX88_00140 774a2883ca33b13d52ae7b828a079092 109 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 3.6E-36 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 IX88_00140 774a2883ca33b13d52ae7b828a079092 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_17510 b56b27ce6fd5d69f42d8970bbc63aa13 354 Pfam PF05036 Sporulation related domain 270 342 2.1E-14 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 IX88_17510 b56b27ce6fd5d69f42d8970bbc63aa13 354 SUPERFAMILY SSF110997 269 342 1.31E-13 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 IX88_17510 b56b27ce6fd5d69f42d8970bbc63aa13 354 Gene3D G3DSA:3.30.70.1070 266 339 7.7E-8 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 IX88_07635 dfe80b7006184ddd8e74fe61a3a1210c 159 Pfam PF08238 Sel1 repeat 76 111 4.9E-5 T 11-10-2018 IPR006597 Sel1-like repeat IX88_07635 dfe80b7006184ddd8e74fe61a3a1210c 159 Pfam PF08238 Sel1 repeat 40 75 9.0E-8 T 11-10-2018 IPR006597 Sel1-like repeat IX88_07635 dfe80b7006184ddd8e74fe61a3a1210c 159 Pfam PF08238 Sel1 repeat 114 146 0.015 T 11-10-2018 IPR006597 Sel1-like repeat IX88_07635 dfe80b7006184ddd8e74fe61a3a1210c 159 SUPERFAMILY SSF81901 32 150 1.02E-22 T 11-10-2018 IX88_07635 dfe80b7006184ddd8e74fe61a3a1210c 159 SMART SM00671 76 111 5.9E-6 T 11-10-2018 IPR006597 Sel1-like repeat IX88_07635 dfe80b7006184ddd8e74fe61a3a1210c 159 SMART SM00671 39 75 3.4E-5 T 11-10-2018 IPR006597 Sel1-like repeat IX88_07635 dfe80b7006184ddd8e74fe61a3a1210c 159 SMART SM00671 112 146 0.9 T 11-10-2018 IPR006597 Sel1-like repeat IX88_07635 dfe80b7006184ddd8e74fe61a3a1210c 159 Gene3D G3DSA:1.25.40.10 15 159 2.4E-31 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_12060 fd93f30420ce2ee473642fbe565fa309 167 Gene3D G3DSA:3.30.910.20 15 167 2.7E-24 T 11-10-2018 IPR024930 Skp domain superfamily IX88_12060 fd93f30420ce2ee473642fbe565fa309 167 SMART SM00935 10 164 4.1E-32 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 IX88_12060 fd93f30420ce2ee473642fbe565fa309 167 SUPERFAMILY SSF111384 22 164 7.19E-24 T 11-10-2018 IX88_12060 fd93f30420ce2ee473642fbe565fa309 167 Pfam PF03938 Outer membrane protein (OmpH-like) 9 162 4.0E-22 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 IX88_09300 f3d10500994ce084f32baf66056fc20e 161 Pfam PF00255 Glutathione peroxidase 4 110 2.6E-40 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 IX88_09300 f3d10500994ce084f32baf66056fc20e 161 PRINTS PR01011 Glutathione peroxidase family signature 123 132 1.5E-21 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 IX88_09300 f3d10500994ce084f32baf66056fc20e 161 PRINTS PR01011 Glutathione peroxidase family signature 57 73 1.5E-21 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 IX88_09300 f3d10500994ce084f32baf66056fc20e 161 PRINTS PR01011 Glutathione peroxidase family signature 22 39 1.5E-21 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 IX88_09300 f3d10500994ce084f32baf66056fc20e 161 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 11-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 IX88_09300 f3d10500994ce084f32baf66056fc20e 161 Gene3D G3DSA:3.40.30.10 1 161 5.5E-70 T 11-10-2018 IX88_09300 f3d10500994ce084f32baf66056fc20e 161 PIRSF PIRSF000303 1 161 3.7E-66 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 IX88_09300 f3d10500994ce084f32baf66056fc20e 161 SUPERFAMILY SSF52833 3 159 1.07E-59 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_09300 f3d10500994ce084f32baf66056fc20e 161 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 IX88_11825 9b51858fc7d904e4720b7474852f495d 174 SUPERFAMILY SSF55729 4 153 9.55E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_11825 9b51858fc7d904e4720b7474852f495d 174 Pfam PF00583 Acetyltransferase (GNAT) family 33 142 2.3E-8 T 11-10-2018 IPR000182 GNAT domain IX88_11825 9b51858fc7d904e4720b7474852f495d 174 Gene3D G3DSA:3.40.630.30 2 156 2.3E-17 T 11-10-2018 IX88_09400 20427f52f09fe8b79b79238b8b1585ef 403 PIRSF PIRSF016578 5 393 1.8E-23 T 11-10-2018 IX88_09400 20427f52f09fe8b79b79238b8b1585ef 403 SUPERFAMILY SSF56645 28 226 1.44E-37 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_09400 20427f52f09fe8b79b79238b8b1585ef 403 Gene3D G3DSA:1.10.540.10 20 125 7.2E-16 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_09400 20427f52f09fe8b79b79238b8b1585ef 403 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 13 403 5.7E-151 T 11-10-2018 IPR023922 Sulphate-starvation-induced SfnB IX88_09400 20427f52f09fe8b79b79238b8b1585ef 403 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 137 218 1.5E-8 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_09400 20427f52f09fe8b79b79238b8b1585ef 403 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 245 378 2.0E-14 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain IX88_09400 20427f52f09fe8b79b79238b8b1585ef 403 Gene3D G3DSA:1.20.140.10 228 400 2.6E-46 T 11-10-2018 IX88_09400 20427f52f09fe8b79b79238b8b1585ef 403 SUPERFAMILY SSF47203 240 402 4.51E-17 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_09400 20427f52f09fe8b79b79238b8b1585ef 403 Gene3D G3DSA:2.40.110.10 128 227 9.7E-27 T 11-10-2018 IX88_09400 20427f52f09fe8b79b79238b8b1585ef 403 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 124 1.4E-7 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_04335 c71c30e23b8ef5b2472e54c2871af6e0 350 Pfam PF12706 Beta-lactamase superfamily domain 114 308 2.6E-35 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_04335 c71c30e23b8ef5b2472e54c2871af6e0 350 Gene3D G3DSA:3.60.15.10 64 350 2.7E-68 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_04335 c71c30e23b8ef5b2472e54c2871af6e0 350 SUPERFAMILY SSF56281 95 313 1.97E-27 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_04335 c71c30e23b8ef5b2472e54c2871af6e0 350 PIRSF PIRSF038896 3 350 2.6E-88 T 11-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 IX88_14650 914246b03bbed32d10d783f5009bc636 821 Gene3D G3DSA:1.10.540.10 127 240 8.4E-93 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_14650 914246b03bbed32d10d783f5009bc636 821 Gene3D G3DSA:2.40.110.10 241 365 8.4E-93 T 11-10-2018 IX88_14650 914246b03bbed32d10d783f5009bc636 821 SUPERFAMILY SSF56645 128 361 1.83E-43 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_14650 914246b03bbed32d10d783f5009bc636 821 SUPERFAMILY SSF47203 366 517 4.04E-23 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_14650 914246b03bbed32d10d783f5009bc636 821 Gene3D G3DSA:1.20.140.10 366 512 8.4E-93 T 11-10-2018 IX88_14650 914246b03bbed32d10d783f5009bc636 821 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 132 238 1.5E-16 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_14650 914246b03bbed32d10d783f5009bc636 821 Pfam PF09317 Domain of unknown function (DUF1974) 520 804 4.3E-97 T 11-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 IX88_14650 914246b03bbed32d10d783f5009bc636 821 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 366 507 1.5E-12 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_07810 64760d99ac47937a55fb00c539cdb003 410 Gene3D G3DSA:1.20.1250.20 216 402 2.5E-23 T 11-10-2018 IX88_07810 64760d99ac47937a55fb00c539cdb003 410 SUPERFAMILY SSF103473 9 399 5.75E-75 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_07810 64760d99ac47937a55fb00c539cdb003 410 Gene3D G3DSA:1.20.1250.20 10 206 6.3E-43 T 11-10-2018 IX88_07810 64760d99ac47937a55fb00c539cdb003 410 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 84 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_07810 64760d99ac47937a55fb00c539cdb003 410 Pfam PF07690 Major Facilitator Superfamily 19 321 1.6E-41 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_10145 cf9f2b7065e2204106a9095754323179 477 SUPERFAMILY SSF51905 2 243 4.0E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_10145 cf9f2b7065e2204106a9095754323179 477 Gene3D G3DSA:3.50.50.60 1 424 3.2E-116 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_10145 cf9f2b7065e2204106a9095754323179 477 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 2 341 6.9E-113 T 11-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase IX88_04065 946173f847172a49ca961265baedecd3 472 Gene3D G3DSA:3.40.50.300 223 472 2.9E-93 T 11-10-2018 IX88_04065 946173f847172a49ca961265baedecd3 472 Gene3D G3DSA:3.40.50.300 3 222 2.8E-41 T 11-10-2018 IX88_04065 946173f847172a49ca961265baedecd3 472 SUPERFAMILY SSF52540 280 470 2.09E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04065 946173f847172a49ca961265baedecd3 472 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 14 224 4.1E-23 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related IX88_04065 946173f847172a49ca961265baedecd3 472 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 252 470 3.4E-78 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 TIGRFAM TIGR00838 argH: argininosuccinate lyase 19 472 1.3E-193 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 Pfam PF14698 Argininosuccinate lyase C-terminal 379 448 1.2E-25 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 SUPERFAMILY SSF48557 19 472 1.13E-155 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 2.6E-31 T 11-10-2018 IPR000362 Fumarate lyase family IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 PRINTS PR00149 Fumarate lyase superfamily signature 291 307 2.6E-31 T 11-10-2018 IPR000362 Fumarate lyase family IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 PRINTS PR00149 Fumarate lyase superfamily signature 118 136 2.6E-31 T 11-10-2018 IPR000362 Fumarate lyase family IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 PRINTS PR00149 Fumarate lyase superfamily signature 247 274 2.6E-31 T 11-10-2018 IPR000362 Fumarate lyase family IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 Hamap MF_00006 Argininosuccinate lyase [argH]. 18 470 44.202 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 Pfam PF00206 Lyase 22 316 3.0E-79 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 PRINTS PR00145 Argininosuccinate lyase family signature 209 225 2.4E-68 T 11-10-2018 IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 PRINTS PR00145 Argininosuccinate lyase family signature 158 178 2.4E-68 T 11-10-2018 IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 PRINTS PR00145 Argininosuccinate lyase family signature 291 307 2.4E-68 T 11-10-2018 IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 PRINTS PR00145 Argininosuccinate lyase family signature 117 139 2.4E-68 T 11-10-2018 IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 PRINTS PR00145 Argininosuccinate lyase family signature 326 345 2.4E-68 T 11-10-2018 IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 PRINTS PR00145 Argininosuccinate lyase family signature 247 271 2.4E-68 T 11-10-2018 IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 Gene3D G3DSA:1.10.275.10 41 245 1.6E-192 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 ProSitePatterns PS00163 Fumarate lyases signature. 291 300 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 Gene3D G3DSA:1.10.40.30 377 449 1.6E-192 T 11-10-2018 IX88_03520 95b3fbd31380e7871f38f5f9b9402916 477 Gene3D G3DSA:1.20.200.10 135 465 1.6E-192 T 11-10-2018 IX88_13170 ed2816a77c4c362daf9fca7edb18d15d 399 Gene3D G3DSA:1.20.1250.20 210 398 3.7E-18 T 11-10-2018 IX88_13170 ed2816a77c4c362daf9fca7edb18d15d 399 SUPERFAMILY SSF103473 10 390 8.63E-60 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_13170 ed2816a77c4c362daf9fca7edb18d15d 399 Pfam PF07690 Major Facilitator Superfamily 23 350 7.9E-37 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_13170 ed2816a77c4c362daf9fca7edb18d15d 399 Gene3D G3DSA:1.20.1250.20 15 209 5.3E-28 T 11-10-2018 IX88_06900 e7fef95bb9187234e7cb2525eb82a503 335 SUPERFAMILY SSF56436 63 331 6.59E-68 T 11-10-2018 IPR016187 C-type lectin fold IX88_06900 e7fef95bb9187234e7cb2525eb82a503 335 Gene3D G3DSA:3.90.1580.10 60 334 2.2E-76 T 11-10-2018 IX88_06900 e7fef95bb9187234e7cb2525eb82a503 335 Pfam PF03781 Sulfatase-modifying factor enzyme 1 63 331 7.5E-63 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 IX88_13800 5bf3af0b4a3a3853fa1b644f59aec39e 522 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 30 505 5.0E-204 T 11-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 IX88_13800 5bf3af0b4a3a3853fa1b644f59aec39e 522 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 297 308 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 IX88_13800 5bf3af0b4a3a3853fa1b644f59aec39e 522 Gene3D G3DSA:3.40.309.10 272 474 1.4E-161 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_13800 5bf3af0b4a3a3853fa1b644f59aec39e 522 Pfam PF00171 Aldehyde dehydrogenase family 38 501 5.1E-145 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_13800 5bf3af0b4a3a3853fa1b644f59aec39e 522 SUPERFAMILY SSF53720 25 507 2.49E-150 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_13800 5bf3af0b4a3a3853fa1b644f59aec39e 522 Gene3D G3DSA:3.40.605.10 46 482 1.4E-161 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_10355 ae87cb04c3fcd68fb5268682d9d3016a 361 SUPERFAMILY SSF53474 49 354 2.86E-28 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_10355 ae87cb04c3fcd68fb5268682d9d3016a 361 Pfam PF00561 alpha/beta hydrolase fold 74 336 1.4E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_10355 ae87cb04c3fcd68fb5268682d9d3016a 361 Gene3D G3DSA:3.40.50.1820 41 360 3.5E-23 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_16675 db36b395b583fe1497dd4fd8e96271d9 296 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 154 183 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site IX88_16675 db36b395b583fe1497dd4fd8e96271d9 296 Gene3D G3DSA:3.40.50.261 126 291 1.6E-73 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 IX88_16675 db36b395b583fe1497dd4fd8e96271d9 296 Pfam PF02629 CoA binding domain 6 99 2.3E-30 T 11-10-2018 IPR003781 CoA-binding GO:0048037 IX88_16675 db36b395b583fe1497dd4fd8e96271d9 296 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 290 2.1E-137 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IX88_16675 db36b395b583fe1497dd4fd8e96271d9 296 Gene3D G3DSA:3.40.50.720 1 125 7.0E-49 T 11-10-2018 IX88_16675 db36b395b583fe1497dd4fd8e96271d9 296 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 290 42.989 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IX88_16675 db36b395b583fe1497dd4fd8e96271d9 296 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 238 251 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site IX88_16675 db36b395b583fe1497dd4fd8e96271d9 296 SMART SM00881 4 100 2.9E-36 T 11-10-2018 IPR003781 CoA-binding GO:0048037 IX88_16675 db36b395b583fe1497dd4fd8e96271d9 296 PIRSF PIRSF001553 1 293 2.5E-129 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IX88_16675 db36b395b583fe1497dd4fd8e96271d9 296 PRINTS PR01798 Succinyl-CoA synthase signature 242 259 2.9E-36 T 11-10-2018 IX88_16675 db36b395b583fe1497dd4fd8e96271d9 296 PRINTS PR01798 Succinyl-CoA synthase signature 210 223 2.9E-36 T 11-10-2018 IX88_16675 db36b395b583fe1497dd4fd8e96271d9 296 PRINTS PR01798 Succinyl-CoA synthase signature 179 197 2.9E-36 T 11-10-2018 IX88_16675 db36b395b583fe1497dd4fd8e96271d9 296 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.9E-36 T 11-10-2018 IX88_16675 db36b395b583fe1497dd4fd8e96271d9 296 SUPERFAMILY SSF51735 1 124 3.15E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_16675 db36b395b583fe1497dd4fd8e96271d9 296 Pfam PF00549 CoA-ligase 153 271 4.4E-18 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 IX88_16675 db36b395b583fe1497dd4fd8e96271d9 296 SUPERFAMILY SSF52210 125 289 1.44E-56 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 IX88_13665 55f4538b62cdd49411815288ca0a902b 169 Gene3D G3DSA:3.40.630.30 2 165 4.0E-30 T 11-10-2018 IX88_13665 55f4538b62cdd49411815288ca0a902b 169 Pfam PF13302 Acetyltransferase (GNAT) domain 12 147 1.1E-23 T 11-10-2018 IPR000182 GNAT domain IX88_13665 55f4538b62cdd49411815288ca0a902b 169 SUPERFAMILY SSF55729 5 151 4.1E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_09975 173df6985f9f851085f5d50be36518bb 380 SUPERFAMILY SSF161098 175 363 7.33E-22 T 11-10-2018 IPR035906 MetI-like superfamily IX88_09975 173df6985f9f851085f5d50be36518bb 380 Gene3D G3DSA:1.10.3720.10 165 379 1.5E-21 T 11-10-2018 IPR035906 MetI-like superfamily IX88_09975 173df6985f9f851085f5d50be36518bb 380 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 380 2.0E-29 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_09975 173df6985f9f851085f5d50be36518bb 380 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 21 58 7.0E-7 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain IX88_11565 a1a5e09296da2c39be6a8a3d81fef886 137 Pfam PF04143 Sulphur transport 9 127 5.7E-9 T 11-10-2018 IPR007272 Sulphur transport domain IX88_10795 6113164ee2b69be2d76d388acc33ebe9 195 SUPERFAMILY SSF52141 9 190 3.66E-23 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 IX88_10795 6113164ee2b69be2d76d388acc33ebe9 195 Gene3D G3DSA:3.40.470.10 5 194 7.0E-21 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 IX88_15605 643f671b69b7460d34a937ca4dce6b96 567 SUPERFAMILY SSF50156 461 548 3.28E-7 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 IX88_15605 643f671b69b7460d34a937ca4dce6b96 567 SUPERFAMILY SSF55486 180 436 4.61E-15 T 11-10-2018 IX88_15605 643f671b69b7460d34a937ca4dce6b96 567 PIRSF PIRSF016493 1 567 3.4E-193 T 11-10-2018 IPR024191 Peptidase M61 IX88_15605 643f671b69b7460d34a937ca4dce6b96 567 Gene3D G3DSA:2.60.40.3650 1 172 3.2E-55 T 11-10-2018 IX88_15605 643f671b69b7460d34a937ca4dce6b96 567 Gene3D G3DSA:1.10.390.60 175 445 2.4E-100 T 11-10-2018 IX88_15605 643f671b69b7460d34a937ca4dce6b96 567 Pfam PF05299 M61 glycyl aminopeptidase 268 384 1.6E-46 T 11-10-2018 IPR007963 Peptidase M61, catalytic domain IX88_15605 643f671b69b7460d34a937ca4dce6b96 567 Gene3D G3DSA:2.30.42.10 468 567 3.1E-13 T 11-10-2018 IX88_04750 c98c4c05cabb9b4072d363ccda40555a 421 PIRSF PIRSF000151 1 421 4.4E-181 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 IX88_04750 c98c4c05cabb9b4072d363ccda40555a 421 Gene3D G3DSA:3.40.309.10 229 378 2.3E-165 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_04750 c98c4c05cabb9b4072d363ccda40555a 421 Pfam PF00171 Aldehyde dehydrogenase family 313 377 2.5E-6 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_04750 c98c4c05cabb9b4072d363ccda40555a 421 Pfam PF00171 Aldehyde dehydrogenase family 9 289 2.0E-16 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_04750 c98c4c05cabb9b4072d363ccda40555a 421 SUPERFAMILY SSF53720 8 420 1.31E-119 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_04750 c98c4c05cabb9b4072d363ccda40555a 421 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 16 410 2.2E-152 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 IX88_04750 c98c4c05cabb9b4072d363ccda40555a 421 Gene3D G3DSA:3.40.605.10 15 417 2.3E-165 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_04750 c98c4c05cabb9b4072d363ccda40555a 421 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 327 348 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 IX88_04750 c98c4c05cabb9b4072d363ccda40555a 421 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 8 420 41.455 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 IX88_09755 77754aeae465c38558dc1e461b5f7675 814 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 12 788 19.312 T 11-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 IX88_09755 77754aeae465c38558dc1e461b5f7675 814 Pfam PF03968 OstA-like protein 105 237 1.0E-9 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal IX88_09755 77754aeae465c38558dc1e461b5f7675 814 Pfam PF04453 Organic solvent tolerance protein 344 721 1.5E-84 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 IX88_12900 7d87a9816dad561709870e209facbbea 168 Gene3D G3DSA:3.40.630.30 1 166 3.1E-49 T 11-10-2018 IX88_12900 7d87a9816dad561709870e209facbbea 168 SUPERFAMILY SSF55729 3 148 1.72E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_12900 7d87a9816dad561709870e209facbbea 168 Pfam PF13527 Acetyltransferase (GNAT) domain 5 129 3.2E-15 T 11-10-2018 IX88_08710 bf3a80ec5059de2fead8c762b28e1726 394 SUPERFAMILY SSF103473 11 384 1.07E-39 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_08710 bf3a80ec5059de2fead8c762b28e1726 394 Pfam PF07690 Major Facilitator Superfamily 20 325 1.3E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_08710 bf3a80ec5059de2fead8c762b28e1726 394 Gene3D G3DSA:1.20.1250.20 11 387 2.5E-36 T 11-10-2018 IX88_15215 4884522f990e13f18af08b7ec91ebb17 774 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 757 774 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site IX88_15215 4884522f990e13f18af08b7ec91ebb17 774 Gene3D G3DSA:2.40.170.20 233 774 9.7E-75 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IX88_15215 4884522f990e13f18af08b7ec91ebb17 774 Gene3D G3DSA:2.170.130.10 92 231 3.5E-17 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_15215 4884522f990e13f18af08b7ec91ebb17 774 Pfam PF07715 TonB-dependent Receptor Plug Domain 117 215 2.3E-9 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_15215 4884522f990e13f18af08b7ec91ebb17 774 SUPERFAMILY SSF56935 77 774 5.49E-98 T 11-10-2018 IX88_15215 4884522f990e13f18af08b7ec91ebb17 774 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 119 774 1.9E-112 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 IX88_15215 4884522f990e13f18af08b7ec91ebb17 774 Pfam PF00593 TonB dependent receptor 307 772 1.7E-28 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_14705 620aa7bddba5453535132ed4d30dabd8 208 Gene3D G3DSA:2.40.500.20 88 204 8.3E-42 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IX88_14705 620aa7bddba5453535132ed4d30dabd8 208 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 2.9E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IX88_14705 620aa7bddba5453535132ed4d30dabd8 208 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 2.9E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IX88_14705 620aa7bddba5453535132ed4d30dabd8 208 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 2.9E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IX88_14705 620aa7bddba5453535132ed4d30dabd8 208 PRINTS PR01703 Manganese superoxide dismutase signature 71 84 2.9E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IX88_14705 620aa7bddba5453535132ed4d30dabd8 208 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 2.9E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IX88_14705 620aa7bddba5453535132ed4d30dabd8 208 Gene3D G3DSA:1.10.287.990 21 87 1.7E-25 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IX88_14705 620aa7bddba5453535132ed4d30dabd8 208 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IX88_14705 620aa7bddba5453535132ed4d30dabd8 208 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 197 4.8E-37 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IX88_14705 620aa7bddba5453535132ed4d30dabd8 208 SUPERFAMILY SSF46609 3 89 2.09E-36 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IX88_14705 620aa7bddba5453535132ed4d30dabd8 208 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 5 88 1.8E-33 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IX88_14705 620aa7bddba5453535132ed4d30dabd8 208 PIRSF PIRSF000349 1 206 5.4E-83 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IX88_14705 620aa7bddba5453535132ed4d30dabd8 208 SUPERFAMILY SSF54719 90 199 6.02E-43 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 IX88_00975 b9e68fee265d12f6272233bf313b46ff 183 Gene3D G3DSA:1.10.260.40 2 75 4.2E-19 T 11-10-2018 IX88_00975 b9e68fee265d12f6272233bf313b46ff 183 SMART SM00530 14 69 1.3E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IX88_00975 b9e68fee265d12f6272233bf313b46ff 183 SUPERFAMILY SSF51182 92 179 8.69E-13 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_00975 b9e68fee265d12f6272233bf313b46ff 183 Pfam PF07883 Cupin domain 113 178 3.3E-8 T 11-10-2018 IPR013096 Cupin 2, conserved barrel IX88_00975 b9e68fee265d12f6272233bf313b46ff 183 SUPERFAMILY SSF47413 6 70 6.44E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IX88_00975 b9e68fee265d12f6272233bf313b46ff 183 Pfam PF01381 Helix-turn-helix 15 67 3.5E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IX88_00975 b9e68fee265d12f6272233bf313b46ff 183 Gene3D G3DSA:2.60.120.10 94 183 2.2E-16 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_00340 ece64834c7bb1765d2694223dee8876b 366 SUPERFAMILY SSF54631 227 359 6.11E-29 T 11-10-2018 IX88_00340 ece64834c7bb1765d2694223dee8876b 366 SMART SM00116 244 292 0.0076 T 11-10-2018 IPR000644 CBS domain IX88_00340 ece64834c7bb1765d2694223dee8876b 366 SMART SM00116 312 359 2.7E-8 T 11-10-2018 IPR000644 CBS domain IX88_00340 ece64834c7bb1765d2694223dee8876b 366 Pfam PF04982 HPP family 54 173 2.5E-39 T 11-10-2018 IPR007065 HPP IX88_00340 ece64834c7bb1765d2694223dee8876b 366 SUPERFAMILY SSF103473 52 176 2.62E-5 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_00340 ece64834c7bb1765d2694223dee8876b 366 Gene3D G3DSA:3.10.580.10 208 295 1.0E-11 T 11-10-2018 IX88_00340 ece64834c7bb1765d2694223dee8876b 366 Gene3D G3DSA:3.10.580.10 301 366 4.4E-13 T 11-10-2018 IX88_00340 ece64834c7bb1765d2694223dee8876b 366 Pfam PF00571 CBS domain 305 358 3.9E-12 T 11-10-2018 IPR000644 CBS domain IX88_00340 ece64834c7bb1765d2694223dee8876b 366 Pfam PF00571 CBS domain 239 290 1.9E-8 T 11-10-2018 IPR000644 CBS domain IX88_01600 8fb1b4c442d024a240d540ca793c32d6 215 SUPERFAMILY SSF56784 1 205 3.2E-12 T 11-10-2018 IPR036412 HAD-like superfamily IX88_01600 8fb1b4c442d024a240d540ca793c32d6 215 Gene3D G3DSA:3.40.50.1000 5 201 4.6E-13 T 11-10-2018 IPR023214 HAD superfamily IX88_01600 8fb1b4c442d024a240d540ca793c32d6 215 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 181 8.0E-15 T 11-10-2018 IX88_01600 8fb1b4c442d024a240d540ca793c32d6 215 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 11-10-2018 IX88_01600 8fb1b4c442d024a240d540ca793c32d6 215 Gene3D G3DSA:1.20.1440.100 16 92 4.6E-13 T 11-10-2018 IX88_03445 e0972fff399b25d46ee3553ee432b530 617 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 5.2E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_03445 e0972fff399b25d46ee3553ee432b530 617 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 28 46 5.2E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_03445 e0972fff399b25d46ee3553ee432b530 617 Pfam PF07664 Ferrous iron transport protein B C terminus 394 446 3.8E-13 T 11-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 IX88_03445 e0972fff399b25d46ee3553ee432b530 617 Gene3D G3DSA:3.40.50.300 5 198 1.3E-44 T 11-10-2018 IX88_03445 e0972fff399b25d46ee3553ee432b530 617 SUPERFAMILY SSF52540 5 170 1.29E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_03445 e0972fff399b25d46ee3553ee432b530 617 Pfam PF07670 Nucleoside recognition 451 587 1.2E-23 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 IX88_03445 e0972fff399b25d46ee3553ee432b530 617 Pfam PF07670 Nucleoside recognition 283 374 1.2E-11 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 IX88_03445 e0972fff399b25d46ee3553ee432b530 617 Pfam PF02421 Ferrous iron transport protein B 6 165 8.2E-57 T 11-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 IX88_05745 45b4a72cc2b5cb189829f4279a1274f5 225 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 35 179 1.7E-68 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05745 45b4a72cc2b5cb189829f4279a1274f5 225 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 25 179 43.003 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05745 45b4a72cc2b5cb189829f4279a1274f5 225 Gene3D G3DSA:3.40.50.12280 19 190 2.7E-70 T 11-10-2018 IX88_05745 45b4a72cc2b5cb189829f4279a1274f5 225 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 146 162 - T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05745 45b4a72cc2b5cb189829f4279a1274f5 225 SUPERFAMILY SSF56770 42 182 7.72E-64 T 11-10-2018 IX88_05745 45b4a72cc2b5cb189829f4279a1274f5 225 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 88 172 4.4E-22 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_13600 8670f0e79aeff62c40bdae9a4b58a47f 420 Gene3D G3DSA:1.10.405.20 75 199 8.0E-27 T 11-10-2018 IX88_13600 8670f0e79aeff62c40bdae9a4b58a47f 420 Gene3D G3DSA:3.50.50.60 3 403 8.0E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_13600 8670f0e79aeff62c40bdae9a4b58a47f 420 Gene3D G3DSA:3.30.70.1990 282 368 8.0E-27 T 11-10-2018 IX88_13600 8670f0e79aeff62c40bdae9a4b58a47f 420 SUPERFAMILY SSF51905 1 418 5.5E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_13600 8670f0e79aeff62c40bdae9a4b58a47f 420 Pfam PF13450 NAD(P)-binding Rossmann-like domain 5 74 4.5E-15 T 11-10-2018 IX88_05685 004b2e7d7ff7e53ac6fbd5ffc6e70375 287 Gene3D G3DSA:3.40.190.290 89 270 1.8E-29 T 11-10-2018 IX88_05685 004b2e7d7ff7e53ac6fbd5ffc6e70375 287 SUPERFAMILY SSF46785 1 105 5.05E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_05685 004b2e7d7ff7e53ac6fbd5ffc6e70375 287 SUPERFAMILY SSF53850 85 285 1.61E-29 T 11-10-2018 IX88_05685 004b2e7d7ff7e53ac6fbd5ffc6e70375 287 Gene3D G3DSA:1.10.10.10 1 87 1.1E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_05685 004b2e7d7ff7e53ac6fbd5ffc6e70375 287 Pfam PF03466 LysR substrate binding domain 84 264 2.1E-25 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_05685 004b2e7d7ff7e53ac6fbd5ffc6e70375 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 5.9E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_08700 3a9cbd8a8feaf8da02a926c1804dca77 269 Pfam PF00378 Enoyl-CoA hydratase/isomerase 22 266 9.9E-55 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 IX88_08700 3a9cbd8a8feaf8da02a926c1804dca77 269 Gene3D G3DSA:3.90.226.10 15 209 2.3E-59 T 11-10-2018 IX88_08700 3a9cbd8a8feaf8da02a926c1804dca77 269 SUPERFAMILY SSF52096 15 266 1.06E-73 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_08700 3a9cbd8a8feaf8da02a926c1804dca77 269 Gene3D G3DSA:1.10.12.10 210 266 5.8E-24 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal IX88_07025 dc969a114d7861290655dfe79de9e364 537 Pfam PF00009 Elongation factor Tu GTP binding domain 24 213 7.9E-45 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_07025 dc969a114d7861290655dfe79de9e364 537 Gene3D G3DSA:3.40.50.300 1 239 2.1E-76 T 11-10-2018 IX88_07025 dc969a114d7861290655dfe79de9e364 537 SUPERFAMILY SSF50465 333 433 3.06E-32 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IX88_07025 dc969a114d7861290655dfe79de9e364 537 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 212 1.9E-13 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IX88_07025 dc969a114d7861290655dfe79de9e364 537 Gene3D G3DSA:2.40.30.10 330 434 4.3E-35 T 11-10-2018 IX88_07025 dc969a114d7861290655dfe79de9e364 537 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 433 1.3E-196 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 IX88_07025 dc969a114d7861290655dfe79de9e364 537 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site IX88_07025 dc969a114d7861290655dfe79de9e364 537 SUPERFAMILY SSF52540 16 236 7.3E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_07025 dc969a114d7861290655dfe79de9e364 537 PRINTS PR00315 GTP-binding elongation factor signature 87 95 6.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_07025 dc969a114d7861290655dfe79de9e364 537 PRINTS PR00315 GTP-binding elongation factor signature 107 117 6.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_07025 dc969a114d7861290655dfe79de9e364 537 PRINTS PR00315 GTP-binding elongation factor signature 160 169 6.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_07025 dc969a114d7861290655dfe79de9e364 537 PRINTS PR00315 GTP-binding elongation factor signature 26 39 6.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_07025 dc969a114d7861290655dfe79de9e364 537 PRINTS PR00315 GTP-binding elongation factor signature 123 134 6.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_07025 dc969a114d7861290655dfe79de9e364 537 SUPERFAMILY SSF50447 242 328 1.37E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IX88_07025 dc969a114d7861290655dfe79de9e364 537 Gene3D G3DSA:2.40.30.10 241 327 6.8E-28 T 11-10-2018 IX88_07025 dc969a114d7861290655dfe79de9e364 537 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 471 52.211 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 IX88_01300 370199cc698851a2f8bd09966492355e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.4E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_01300 370199cc698851a2f8bd09966492355e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.4E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_01300 370199cc698851a2f8bd09966492355e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.4E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_01300 370199cc698851a2f8bd09966492355e 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_01300 370199cc698851a2f8bd09966492355e 216 SMART SM00448 1 115 6.6E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_01300 370199cc698851a2f8bd09966492355e 216 SMART SM00421 149 206 4.1E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_01300 370199cc698851a2f8bd09966492355e 216 Pfam PF00072 Response regulator receiver domain 3 115 2.6E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_01300 370199cc698851a2f8bd09966492355e 216 Gene3D G3DSA:3.40.50.12740 1 210 9.1E-55 T 11-10-2018 IX88_01300 370199cc698851a2f8bd09966492355e 216 SUPERFAMILY SSF52172 1 130 5.27E-30 T 11-10-2018 IPR011006 CheY-like superfamily IX88_01300 370199cc698851a2f8bd09966492355e 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.2E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_01300 370199cc698851a2f8bd09966492355e 216 SUPERFAMILY SSF46894 143 210 2.07E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 IX88_10735 8f26df706d7b07ac30b0d412a1d302b8 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_10735 8f26df706d7b07ac30b0d412a1d302b8 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 253 1.2E-51 T 11-10-2018 IX88_10735 8f26df706d7b07ac30b0d412a1d302b8 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.0E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10735 8f26df706d7b07ac30b0d412a1d302b8 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.0E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10735 8f26df706d7b07ac30b0d412a1d302b8 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.0E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10735 8f26df706d7b07ac30b0d412a1d302b8 256 Gene3D G3DSA:3.40.50.720 1 254 3.2E-63 T 11-10-2018 IX88_10735 8f26df706d7b07ac30b0d412a1d302b8 256 SUPERFAMILY SSF51735 4 254 3.5E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_10735 8f26df706d7b07ac30b0d412a1d302b8 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 102 122 4.3E-45 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 IX88_10735 8f26df706d7b07ac30b0d412a1d302b8 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 82 99 4.3E-45 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 IX88_10735 8f26df706d7b07ac30b0d412a1d302b8 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 9 26 4.3E-45 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 IX88_10735 8f26df706d7b07ac30b0d412a1d302b8 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 206 225 4.3E-45 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 IX88_10735 8f26df706d7b07ac30b0d412a1d302b8 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 232 251 4.3E-45 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 IX88_10735 8f26df706d7b07ac30b0d412a1d302b8 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 167 190 4.3E-45 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 IX88_17060 0993f5a277872ee1bf5c1d78852b3d6a 484 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 420 2.9E-154 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 IX88_17060 0993f5a277872ee1bf5c1d78852b3d6a 484 Pfam PF10150 Ribonuclease E/G family 115 387 8.1E-103 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 IX88_17060 0993f5a277872ee1bf5c1d78852b3d6a 484 Pfam PF00575 S1 RNA binding domain 38 111 4.5E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 IX88_17060 0993f5a277872ee1bf5c1d78852b3d6a 484 SMART SM00316 37 113 7.2E-13 T 11-10-2018 IPR022967 RNA-binding domain, S1 IX88_17060 0993f5a277872ee1bf5c1d78852b3d6a 484 Gene3D G3DSA:2.40.50.140 31 118 2.6E-25 T 11-10-2018 IX88_17060 0993f5a277872ee1bf5c1d78852b3d6a 484 SUPERFAMILY SSF50249 39 118 8.49E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_14450 5d43a93e69da1424fc187a8a0d48b444 585 Pfam PF00437 Type II/IV secretion system protein 214 474 2.7E-78 T 11-10-2018 IPR001482 Type II/IV secretion system protein IX88_14450 5d43a93e69da1424fc187a8a0d48b444 585 SUPERFAMILY SSF160246 63 160 6.02E-8 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily IX88_14450 5d43a93e69da1424fc187a8a0d48b444 585 Gene3D G3DSA:3.30.450.90 169 307 1.0E-41 T 11-10-2018 IX88_14450 5d43a93e69da1424fc187a8a0d48b444 585 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 63 162 9.9E-12 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal IX88_14450 5d43a93e69da1424fc187a8a0d48b444 585 SMART SM00382 335 477 0.0098 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_14450 5d43a93e69da1424fc187a8a0d48b444 585 Gene3D G3DSA:3.40.50.300 311 583 1.4E-106 T 11-10-2018 IX88_14450 5d43a93e69da1424fc187a8a0d48b444 585 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 402 416 - T 11-10-2018 IPR001482 Type II/IV secretion system protein IX88_14450 5d43a93e69da1424fc187a8a0d48b444 585 SUPERFAMILY SSF52540 195 582 1.62E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04110 e9b26f6540681737f7c15c77738acd1f 109 Pfam PF13591 MerR HTH family regulatory protein 28 107 4.4E-17 T 11-10-2018 IX88_04110 e9b26f6540681737f7c15c77738acd1f 109 Gene3D G3DSA:1.10.1660.10 19 109 1.7E-23 T 11-10-2018 IX88_00695 d368afc7b4bab307857582c1704bdea3 1493 Pfam PF04898 Glutamate synthase central domain 470 749 2.4E-106 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 IX88_00695 d368afc7b4bab307857582c1704bdea3 1493 Pfam PF00310 Glutamine amidotransferases class-II 25 439 1.2E-162 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain IX88_00695 d368afc7b4bab307857582c1704bdea3 1493 Gene3D G3DSA:3.60.20.10 25 558 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IX88_00695 d368afc7b4bab307857582c1704bdea3 1493 Pfam PF01645 Conserved region in glutamate synthase 806 1167 1.0E-147 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 IX88_00695 d368afc7b4bab307857582c1704bdea3 1493 Gene3D G3DSA:3.20.20.70 496 1182 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_00695 d368afc7b4bab307857582c1704bdea3 1493 Gene3D G3DSA:3.20.20.70 444 804 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_00695 d368afc7b4bab307857582c1704bdea3 1493 SUPERFAMILY SSF69336 1223 1478 1.31E-88 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 IX88_00695 d368afc7b4bab307857582c1704bdea3 1493 SUPERFAMILY SSF56235 25 442 9.65E-141 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IX88_00695 d368afc7b4bab307857582c1704bdea3 1493 Pfam PF01493 GXGXG motif 1248 1434 5.6E-76 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 IX88_00695 d368afc7b4bab307857582c1704bdea3 1493 SUPERFAMILY SSF51395 462 1200 5.95E-246 T 11-10-2018 IX88_00695 d368afc7b4bab307857582c1704bdea3 1493 Gene3D G3DSA:2.160.20.60 1221 1491 3.8E-98 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 IX88_07365 e708d3656356b8d49af35508d888f661 220 Gene3D G3DSA:3.30.420.10 14 211 6.4E-46 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IX88_07365 e708d3656356b8d49af35508d888f661 220 SMART SM00479 22 210 3.0E-22 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III IX88_07365 e708d3656356b8d49af35508d888f661 220 SUPERFAMILY SSF53098 13 209 5.81E-52 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_07365 e708d3656356b8d49af35508d888f661 220 Pfam PF00929 Exonuclease 24 201 1.1E-31 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III IX88_07365 e708d3656356b8d49af35508d888f661 220 Hamap MF_00157 Ribonuclease T [rnt]. 1 220 90.188 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 IX88_07365 e708d3656356b8d49af35508d888f661 220 TIGRFAM TIGR01298 RNaseT: ribonuclease T 15 208 6.9E-83 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 IX88_06420 d3a21b915abb3292debd085291114a12 260 SUPERFAMILY SSF55729 25 229 9.08E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_06420 d3a21b915abb3292debd085291114a12 260 Gene3D G3DSA:3.40.630.30 32 194 3.0E-16 T 11-10-2018 IX88_06420 d3a21b915abb3292debd085291114a12 260 Pfam PF13444 Acetyltransferase (GNAT) domain 45 140 2.4E-16 T 11-10-2018 IX88_04570 5de0bcbb16240e94334c887769fcd376 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 4.9E-28 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 IX88_04570 5de0bcbb16240e94334c887769fcd376 134 Gene3D G3DSA:3.30.420.270 61 130 7.7E-13 T 11-10-2018 IX88_16770 75a7d67b2c857b22b01445084cbb90c5 394 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 385 1.2E-109 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 IX88_16770 75a7d67b2c857b22b01445084cbb90c5 394 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 177 205 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 IX88_16770 75a7d67b2c857b22b01445084cbb90c5 394 Gene3D G3DSA:1.20.1090.10 190 394 1.1E-59 T 11-10-2018 IX88_16770 75a7d67b2c857b22b01445084cbb90c5 394 Gene3D G3DSA:3.40.50.1970 1 188 7.8E-57 T 11-10-2018 IX88_16770 75a7d67b2c857b22b01445084cbb90c5 394 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 IX88_16770 75a7d67b2c857b22b01445084cbb90c5 394 SUPERFAMILY SSF56796 5 394 1.31E-111 T 11-10-2018 IX88_10600 c6200bcfb4833f0ea936dc90cadbfc19 390 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 IX88_10600 c6200bcfb4833f0ea936dc90cadbfc19 390 PIRSF PIRSF000429 1 390 4.5E-112 T 11-10-2018 IPR002155 Thiolase GO:0016747 IX88_10600 c6200bcfb4833f0ea936dc90cadbfc19 390 Gene3D G3DSA:3.40.47.10 126 388 2.0E-140 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_10600 c6200bcfb4833f0ea936dc90cadbfc19 390 SUPERFAMILY SSF53901 270 389 4.16E-39 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_10600 c6200bcfb4833f0ea936dc90cadbfc19 390 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 IX88_10600 c6200bcfb4833f0ea936dc90cadbfc19 390 Gene3D G3DSA:3.40.47.10 5 274 2.0E-140 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_10600 c6200bcfb4833f0ea936dc90cadbfc19 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 9.2E-130 T 11-10-2018 IPR002155 Thiolase GO:0016747 IX88_10600 c6200bcfb4833f0ea936dc90cadbfc19 390 Pfam PF02803 Thiolase, C-terminal domain 269 389 2.1E-43 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 IX88_10600 c6200bcfb4833f0ea936dc90cadbfc19 390 Pfam PF00108 Thiolase, N-terminal domain 4 261 1.2E-88 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 IX88_10600 c6200bcfb4833f0ea936dc90cadbfc19 390 SUPERFAMILY SSF53901 4 268 4.01E-78 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_06805 b4b2bd1560e4bf292afb68aa9e70d71f 432 SUPERFAMILY SSF103473 15 430 1.83E-58 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_06805 b4b2bd1560e4bf292afb68aa9e70d71f 432 Pfam PF07690 Major Facilitator Superfamily 66 310 5.7E-23 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_06805 b4b2bd1560e4bf292afb68aa9e70d71f 432 Gene3D G3DSA:1.20.1250.20 18 431 5.6E-54 T 11-10-2018 IX88_11990 2d8c905c1d7d636cfce29316a3dfe5b8 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site IX88_11990 2d8c905c1d7d636cfce29316a3dfe5b8 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 3.0E-18 T 11-10-2018 IX88_11990 2d8c905c1d7d636cfce29316a3dfe5b8 149 SUPERFAMILY SSF46785 3 62 4.21E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_11990 2d8c905c1d7d636cfce29316a3dfe5b8 149 Gene3D G3DSA:1.10.10.10 4 52 1.3E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_11990 2d8c905c1d7d636cfce29316a3dfe5b8 149 Gene3D G3DSA:3.30.70.920 53 147 4.4E-20 T 11-10-2018 IX88_11990 2d8c905c1d7d636cfce29316a3dfe5b8 149 SMART SM00344 3 112 6.1E-38 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 IX88_11990 2d8c905c1d7d636cfce29316a3dfe5b8 149 SUPERFAMILY SSF54909 65 147 2.41E-15 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel IX88_11990 2d8c905c1d7d636cfce29316a3dfe5b8 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 3.1E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_11990 2d8c905c1d7d636cfce29316a3dfe5b8 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 3.1E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_11990 2d8c905c1d7d636cfce29316a3dfe5b8 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 3.1E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_11990 2d8c905c1d7d636cfce29316a3dfe5b8 149 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 8.2E-15 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IX88_15430 be112faa58ec970e3d1f2fcebb549f64 459 Gene3D G3DSA:1.10.3720.10 224 457 7.0E-36 T 11-10-2018 IPR035906 MetI-like superfamily IX88_15430 be112faa58ec970e3d1f2fcebb549f64 459 SUPERFAMILY SSF161098 204 446 4.71E-33 T 11-10-2018 IPR035906 MetI-like superfamily IX88_15430 be112faa58ec970e3d1f2fcebb549f64 459 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 249 455 9.7E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_15430 be112faa58ec970e3d1f2fcebb549f64 459 Pfam PF12501 Phosphate ATP-binding cassette transporter 8 180 3.1E-34 T 11-10-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 IX88_15430 be112faa58ec970e3d1f2fcebb549f64 459 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 165 454 5.3E-86 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 IX88_00725 0b2dae6084e7862f26ed9615909913f4 246 Pfam PF04350 Pilus assembly protein, PilO 73 220 9.7E-50 T 11-10-2018 IPR007445 Pilus assembly protein, PilO IX88_00725 0b2dae6084e7862f26ed9615909913f4 246 PIRSF PIRSF016482 9 237 2.8E-59 T 11-10-2018 IPR007445 Pilus assembly protein, PilO IX88_00725 0b2dae6084e7862f26ed9615909913f4 246 Gene3D G3DSA:3.30.70.60 118 230 1.9E-33 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 IX88_00590 535e2c854bf387738274d83efd0c80ba 160 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 1.8E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_00590 535e2c854bf387738274d83efd0c80ba 160 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 34 115 2.0E-8 T 11-10-2018 IPR031982 Type IV minor pilin ComP IX88_00590 535e2c854bf387738274d83efd0c80ba 160 SUPERFAMILY SSF54523 14 133 2.56E-18 T 11-10-2018 IX88_00590 535e2c854bf387738274d83efd0c80ba 160 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_00590 535e2c854bf387738274d83efd0c80ba 160 Gene3D G3DSA:3.30.700.10 14 158 6.3E-21 T 11-10-2018 IX88_00590 535e2c854bf387738274d83efd0c80ba 160 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 32 1.1E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_00590 535e2c854bf387738274d83efd0c80ba 160 PRINTS PR00813 Bacterial general secretion pathway protein G signature 48 66 1.4E-9 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 IX88_00590 535e2c854bf387738274d83efd0c80ba 160 PRINTS PR00813 Bacterial general secretion pathway protein G signature 12 37 1.4E-9 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 IX88_02940 5cf4405828df054c369674802b194ea2 213 Pfam PF09335 SNARE associated Golgi protein 45 171 8.5E-24 T 11-10-2018 IPR032816 SNARE associated Golgi protein IX88_06645 914b8cbd53dd4efca15d8b5d9d4fc589 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 8.6E-227 T 11-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 IX88_06645 914b8cbd53dd4efca15d8b5d9d4fc589 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 57.877 T 11-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 IX88_06645 914b8cbd53dd4efca15d8b5d9d4fc589 490 Gene3D G3DSA:3.40.309.10 255 486 1.3E-78 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_06645 914b8cbd53dd4efca15d8b5d9d4fc589 490 Pfam PF00171 Aldehyde dehydrogenase family 16 479 9.3E-178 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_06645 914b8cbd53dd4efca15d8b5d9d4fc589 490 SUPERFAMILY SSF53720 4 484 2.62E-171 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_06645 914b8cbd53dd4efca15d8b5d9d4fc589 490 Gene3D G3DSA:3.40.605.10 3 254 2.0E-105 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_06645 914b8cbd53dd4efca15d8b5d9d4fc589 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 IX88_06645 914b8cbd53dd4efca15d8b5d9d4fc589 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 Pfam PF00873 AcrB/AcrD/AcrF family 3 1035 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 Gene3D G3DSA:3.30.2090.10 729 817 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 SUPERFAMILY SSF82693 41 134 2.51E-26 T 11-10-2018 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 Gene3D G3DSA:3.30.70.1430 575 676 0.0 T 11-10-2018 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 Gene3D G3DSA:3.30.2090.10 181 276 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 SUPERFAMILY SSF82714 185 271 4.71E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 Gene3D G3DSA:3.30.70.1430 40 825 0.0 T 11-10-2018 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 Gene3D G3DSA:1.20.1640.10 10 520 0.0 T 11-10-2018 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 Gene3D G3DSA:3.30.70.1440 677 874 0.0 T 11-10-2018 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 SUPERFAMILY SSF82693 680 865 6.8E-27 T 11-10-2018 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 SUPERFAMILY SSF82714 730 817 2.22E-21 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 SUPERFAMILY SSF82693 573 679 6.28E-28 T 11-10-2018 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 SUPERFAMILY SSF82866 297 497 1.44E-53 T 11-10-2018 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 SUPERFAMILY SSF82693 139 331 2.77E-26 T 11-10-2018 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 Gene3D G3DSA:3.30.70.1320 135 333 0.0 T 11-10-2018 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1045 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.9E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.9E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.9E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 PRINTS PR00702 Acriflavin resistance protein family signature 560 577 2.9E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.9E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 2.9E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 2.9E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 2.9E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 PRINTS PR00702 Acriflavin resistance protein family signature 629 643 2.9E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 Gene3D G3DSA:1.20.1640.10 521 1031 0.0 T 11-10-2018 IX88_14510 702b6bfd8da87a5d389675cc14f7b135 1059 SUPERFAMILY SSF82866 839 1034 3.53E-43 T 11-10-2018 IX88_14625 5fc08eaa3eae14ae15c2fa89ab9e002a 448 Pfam PF07690 Major Facilitator Superfamily 32 358 3.7E-25 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_14625 5fc08eaa3eae14ae15c2fa89ab9e002a 448 SUPERFAMILY SSF103473 15 433 6.02E-55 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_14625 5fc08eaa3eae14ae15c2fa89ab9e002a 448 Gene3D G3DSA:1.20.1250.20 231 439 1.5E-31 T 11-10-2018 IX88_14625 5fc08eaa3eae14ae15c2fa89ab9e002a 448 Gene3D G3DSA:1.20.1250.20 16 211 8.7E-39 T 11-10-2018 IX88_17130 bba59021f377a80ee10b3f75a260e760 323 Pfam PF01734 Patatin-like phospholipase 57 214 3.4E-27 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 IX88_17130 bba59021f377a80ee10b3f75a260e760 323 Gene3D G3DSA:3.40.1090.10 39 152 1.1E-29 T 11-10-2018 IX88_17130 bba59021f377a80ee10b3f75a260e760 323 SUPERFAMILY SSF52151 24 304 1.39E-53 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IX88_14415 aba4aa565987e94176c0fd360142a5bc 798 Pfam PF14814 Bifunctional transglycosylase second domain 58 141 3.2E-20 T 11-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_14415 aba4aa565987e94176c0fd360142a5bc 798 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 20 734 3.6E-240 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_14415 aba4aa565987e94176c0fd360142a5bc 798 Pfam PF00905 Penicillin binding protein transpeptidase domain 418 680 5.7E-26 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 IX88_14415 aba4aa565987e94176c0fd360142a5bc 798 Gene3D G3DSA:3.30.2060.10 56 144 5.6E-244 T 11-10-2018 IX88_14415 aba4aa565987e94176c0fd360142a5bc 798 Pfam PF00912 Transglycosylase 153 323 2.7E-59 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_14415 aba4aa565987e94176c0fd360142a5bc 798 SUPERFAMILY SSF53955 146 345 3.09E-68 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily IX88_14415 aba4aa565987e94176c0fd360142a5bc 798 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 157 694 3.4E-155 T 11-10-2018 IX88_14415 aba4aa565987e94176c0fd360142a5bc 798 SUPERFAMILY SSF56601 305 749 4.55E-115 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like IX88_14415 aba4aa565987e94176c0fd360142a5bc 798 Gene3D G3DSA:3.40.710.10 48 705 5.6E-244 T 11-10-2018 IX88_14415 aba4aa565987e94176c0fd360142a5bc 798 Gene3D G3DSA:1.10.3810.10 145 347 5.6E-244 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_14415 aba4aa565987e94176c0fd360142a5bc 798 PIRSF PIRSF002799 1 785 4.7E-304 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_05870 c970bfeaf9a32b47ed2b936795747627 189 Gene3D G3DSA:1.10.357.10 2 186 2.5E-29 T 11-10-2018 IX88_05870 c970bfeaf9a32b47ed2b936795747627 189 SUPERFAMILY SSF46689 3 75 3.39E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_05870 c970bfeaf9a32b47ed2b936795747627 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 3.4E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_05870 c970bfeaf9a32b47ed2b936795747627 189 SUPERFAMILY SSF48498 80 181 2.85E-12 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_05870 c970bfeaf9a32b47ed2b936795747627 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 6.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_05870 c970bfeaf9a32b47ed2b936795747627 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 6.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_18085 f728509f2038897f6da5c6a47a09d9c3 483 Pfam PF00919 Uncharacterized protein family UPF0004 32 132 1.0E-28 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 IX88_18085 f728509f2038897f6da5c6a47a09d9c3 483 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 32 470 1.4E-141 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 IX88_18085 f728509f2038897f6da5c6a47a09d9c3 483 Gene3D G3DSA:3.80.30.20 181 415 2.0E-81 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe IX88_18085 f728509f2038897f6da5c6a47a09d9c3 483 Pfam PF04055 Radical SAM superfamily 186 360 1.5E-28 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 IX88_18085 f728509f2038897f6da5c6a47a09d9c3 483 SMART SM00729 182 402 1.2E-59 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 IX88_18085 f728509f2038897f6da5c6a47a09d9c3 483 SUPERFAMILY SSF102114 165 408 1.7E-61 T 11-10-2018 IX88_18085 f728509f2038897f6da5c6a47a09d9c3 483 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 31 476 69.619 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 IX88_18085 f728509f2038897f6da5c6a47a09d9c3 483 Gene3D G3DSA:3.40.50.12160 31 165 2.4E-34 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily IX88_18085 f728509f2038897f6da5c6a47a09d9c3 483 Pfam PF01938 TRAM domain 414 475 7.9E-8 T 11-10-2018 IPR002792 TRAM domain IX88_18085 f728509f2038897f6da5c6a47a09d9c3 483 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 186 206 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 IX88_18085 f728509f2038897f6da5c6a47a09d9c3 483 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 32 470 2.0E-175 T 11-10-2018 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 343 448 4.1E-18 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 318 1.0E-35 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 Gene3D G3DSA:3.30.390.30 339 457 1.4E-37 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 PIRSF PIRSF000350 1 457 4.2E-56 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 Gene3D G3DSA:3.50.50.60 140 261 2.4E-75 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 SUPERFAMILY SSF55424 343 454 4.3E-24 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 1.4E-32 T 11-10-2018 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 131 140 1.4E-32 T 11-10-2018 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 1.4E-32 T 11-10-2018 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 1.4E-32 T 11-10-2018 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 1.4E-32 T 11-10-2018 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.4E-32 T 11-10-2018 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 1.4E-32 T 11-10-2018 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 1.4E-32 T 11-10-2018 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 SUPERFAMILY SSF51905 1 368 2.87E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 1.7E-10 T 11-10-2018 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 128 146 1.7E-10 T 11-10-2018 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.7E-10 T 11-10-2018 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.7E-10 T 11-10-2018 IX88_17845 e520d9b97d85ea1b034fcaa4685512a5 457 Gene3D G3DSA:3.50.50.60 2 325 2.4E-75 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_14400 183c5704d1a656959a0ad582782b76d4 336 Gene3D G3DSA:3.40.1030.10 85 335 2.1E-60 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 IX88_14400 183c5704d1a656959a0ad582782b76d4 336 Pfam PF00591 Glycosyl transferase family, a/b domain 108 324 2.9E-12 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 IX88_14400 183c5704d1a656959a0ad582782b76d4 336 SUPERFAMILY SSF47648 22 81 7.72E-16 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 IX88_14400 183c5704d1a656959a0ad582782b76d4 336 Pfam PF02885 Glycosyl transferase family, helical bundle domain 24 77 1.9E-15 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 IX88_14400 183c5704d1a656959a0ad582782b76d4 336 Gene3D G3DSA:1.20.970.10 14 82 4.1E-25 T 11-10-2018 IX88_14400 183c5704d1a656959a0ad582782b76d4 336 SUPERFAMILY SSF52418 86 331 2.49E-61 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 IX88_00145 63fb7b18fb813bfae2b4fba41d688e3a 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.717 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00145 63fb7b18fb813bfae2b4fba41d688e3a 91 SUPERFAMILY SSF54570 3 84 5.23E-34 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00145 63fb7b18fb813bfae2b4fba41d688e3a 91 Gene3D G3DSA:3.30.860.10 1 91 3.6E-39 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00145 63fb7b18fb813bfae2b4fba41d688e3a 91 PIRSF PIRSF002144 1 91 4.0E-31 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00145 63fb7b18fb813bfae2b4fba41d688e3a 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.7E-43 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 IX88_00145 63fb7b18fb813bfae2b4fba41d688e3a 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00145 63fb7b18fb813bfae2b4fba41d688e3a 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.2E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00145 63fb7b18fb813bfae2b4fba41d688e3a 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.2E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00145 63fb7b18fb813bfae2b4fba41d688e3a 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.2E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00145 63fb7b18fb813bfae2b4fba41d688e3a 91 Pfam PF00203 Ribosomal protein S19 3 83 3.9E-35 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_12190 04d5e5677def0a02d89d88844ec7745a 287 SUPERFAMILY SSF103481 183 282 2.62E-8 T 11-10-2018 IX88_12190 04d5e5677def0a02d89d88844ec7745a 287 Pfam PF00892 EamA-like transporter family 6 135 3.4E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_12190 04d5e5677def0a02d89d88844ec7745a 287 Pfam PF00892 EamA-like transporter family 149 280 1.8E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_12190 04d5e5677def0a02d89d88844ec7745a 287 SUPERFAMILY SSF103481 42 132 6.28E-10 T 11-10-2018 IX88_00655 b9a343a5b90f6377b5237b4c6f5ff84d 542 Pfam PF04932 O-Antigen ligase 192 343 3.9E-16 T 11-10-2018 IPR007016 O-antigen ligase-related IX88_00655 b9a343a5b90f6377b5237b4c6f5ff84d 542 Pfam PF15864 Protein glycosylation ligase 153 178 2.2E-10 T 11-10-2018 IPR031726 Protein glycosylation ligase domain IX88_00655 b9a343a5b90f6377b5237b4c6f5ff84d 542 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 369 532 9.9E-14 T 11-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal IX88_13370 01d121cbda2b1fe9c923853ef99276ed 792 PIRSF PIRSF000854 2 792 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 IX88_13370 01d121cbda2b1fe9c923853ef99276ed 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 479 780 8.7E-64 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 IX88_13370 01d121cbda2b1fe9c923853ef99276ed 792 Gene3D G3DSA:3.30.470.20 193 356 3.2E-58 T 11-10-2018 IX88_13370 01d121cbda2b1fe9c923853ef99276ed 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 IX88_13370 01d121cbda2b1fe9c923853ef99276ed 792 SUPERFAMILY SSF51621 460 790 2.25E-101 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 IX88_13370 01d121cbda2b1fe9c923853ef99276ed 792 Gene3D G3DSA:3.50.30.10 357 476 6.3E-42 T 11-10-2018 IX88_13370 01d121cbda2b1fe9c923853ef99276ed 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 IX88_13370 01d121cbda2b1fe9c923853ef99276ed 792 SUPERFAMILY SSF56059 4 383 2.56E-105 T 11-10-2018 IX88_13370 01d121cbda2b1fe9c923853ef99276ed 792 Gene3D G3DSA:3.20.20.60 477 789 7.6E-104 T 11-10-2018 IX88_13370 01d121cbda2b1fe9c923853ef99276ed 792 SUPERFAMILY SSF52009 347 466 1.57E-34 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 IX88_13370 01d121cbda2b1fe9c923853ef99276ed 792 Gene3D G3DSA:3.30.1490.20 2 192 1.8E-71 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 IX88_13370 01d121cbda2b1fe9c923853ef99276ed 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 786 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 IX88_13370 01d121cbda2b1fe9c923853ef99276ed 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 7.5E-26 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 IX88_13370 01d121cbda2b1fe9c923853ef99276ed 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 343 7.9E-118 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 IX88_14795 9779a8b30185cd0e3b10be89bdef4115 829 Gene3D G3DSA:2.60.40.10 640 727 2.6E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_14795 9779a8b30185cd0e3b10be89bdef4115 829 Gene3D G3DSA:2.60.40.10 728 814 1.1E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_14795 9779a8b30185cd0e3b10be89bdef4115 829 SMART SM00060 642 722 16.0 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 IX88_14795 9779a8b30185cd0e3b10be89bdef4115 829 SMART SM00060 732 814 0.045 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 IX88_14795 9779a8b30185cd0e3b10be89bdef4115 829 SUPERFAMILY SSF49265 657 816 1.35E-10 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 IX88_14795 9779a8b30185cd0e3b10be89bdef4115 829 Pfam PF13550 Putative phage tail protein 230 412 2.5E-35 T 11-10-2018 IPR032876 Tip attachment protein J IX88_06530 26db35e982517247e19f50ea122a818d 661 SUPERFAMILY SSF56235 84 657 9.26E-146 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IX88_06530 26db35e982517247e19f50ea122a818d 661 Gene3D G3DSA:1.10.246.130 336 468 5.4E-39 T 11-10-2018 IX88_06530 26db35e982517247e19f50ea122a818d 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 467 485 6.2E-61 T 11-10-2018 IX88_06530 26db35e982517247e19f50ea122a818d 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 489 507 6.2E-61 T 11-10-2018 IX88_06530 26db35e982517247e19f50ea122a818d 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 210 229 6.2E-61 T 11-10-2018 IX88_06530 26db35e982517247e19f50ea122a818d 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 320 336 6.2E-61 T 11-10-2018 IX88_06530 26db35e982517247e19f50ea122a818d 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 553 570 6.2E-61 T 11-10-2018 IX88_06530 26db35e982517247e19f50ea122a818d 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 113 138 6.2E-61 T 11-10-2018 IX88_06530 26db35e982517247e19f50ea122a818d 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 192 210 6.2E-61 T 11-10-2018 IX88_06530 26db35e982517247e19f50ea122a818d 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 351 370 6.2E-61 T 11-10-2018 IX88_06530 26db35e982517247e19f50ea122a818d 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 526 541 6.2E-61 T 11-10-2018 IX88_06530 26db35e982517247e19f50ea122a818d 661 Pfam PF01019 Gamma-glutamyltranspeptidase 106 653 7.4E-141 T 11-10-2018 IX88_06530 26db35e982517247e19f50ea122a818d 661 Gene3D G3DSA:3.60.20.40 469 657 1.2E-46 T 11-10-2018 IX88_06530 26db35e982517247e19f50ea122a818d 661 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 92 650 7.0E-109 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 IX88_03215 349084195c118cb030c5654900264ad0 792 SMART SM00729 414 664 4.6E-9 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 IX88_03215 349084195c118cb030c5654900264ad0 792 Pfam PF11842 Domain of unknown function (DUF3362) 632 772 3.5E-62 T 11-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal IX88_03215 349084195c118cb030c5654900264ad0 792 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 418 438 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 IX88_03215 349084195c118cb030c5654900264ad0 792 Pfam PF08497 Radical SAM N-terminal 30 417 3.8E-141 T 11-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal IX88_03215 349084195c118cb030c5654900264ad0 792 Pfam PF04055 Radical SAM superfamily 418 621 1.4E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 IX88_03215 349084195c118cb030c5654900264ad0 792 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 30 684 49.018 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 IX88_03215 349084195c118cb030c5654900264ad0 792 SUPERFAMILY SSF102114 416 668 9.94E-11 T 11-10-2018 IX88_03215 349084195c118cb030c5654900264ad0 792 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 30 682 6.0E-257 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 IX88_03215 349084195c118cb030c5654900264ad0 792 Gene3D G3DSA:3.80.30.20 414 679 7.8E-14 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe IX88_00080 0641093f89eb2237c5bc8e1c4bb0cdba 165 Gene3D G3DSA:3.30.230.10 73 165 1.2E-36 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IX88_00080 0641093f89eb2237c5bc8e1c4bb0cdba 165 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 162 3.5E-65 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 IX88_00080 0641093f89eb2237c5bc8e1c4bb0cdba 165 SUPERFAMILY SSF54211 79 158 2.2E-26 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_00080 0641093f89eb2237c5bc8e1c4bb0cdba 165 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 162 34.042 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 IX88_00080 0641093f89eb2237c5bc8e1c4bb0cdba 165 Pfam PF03719 Ribosomal protein S5, C-terminal domain 86 156 1.9E-29 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 IX88_00080 0641093f89eb2237c5bc8e1c4bb0cdba 165 Pfam PF00333 Ribosomal protein S5, N-terminal domain 10 73 2.6E-27 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 IX88_00080 0641093f89eb2237c5bc8e1c4bb0cdba 165 ProSitePatterns PS00585 Ribosomal protein S5 signature. 27 59 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site IX88_00080 0641093f89eb2237c5bc8e1c4bb0cdba 165 Gene3D G3DSA:3.30.160.20 1 72 4.6E-29 T 11-10-2018 IX88_00080 0641093f89eb2237c5bc8e1c4bb0cdba 165 SUPERFAMILY SSF54768 7 75 9.42E-23 T 11-10-2018 IX88_07800 edbf8169c82d551dfb0b9b4bccaa9b66 483 Pfam PF00171 Aldehyde dehydrogenase family 16 472 7.1E-147 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_07800 edbf8169c82d551dfb0b9b4bccaa9b66 483 Gene3D G3DSA:3.40.309.10 255 442 1.8E-152 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_07800 edbf8169c82d551dfb0b9b4bccaa9b66 483 Gene3D G3DSA:3.40.605.10 8 469 1.8E-152 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_07800 edbf8169c82d551dfb0b9b4bccaa9b66 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 IX88_07800 edbf8169c82d551dfb0b9b4bccaa9b66 483 SUPERFAMILY SSF53720 2 477 1.57E-148 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_12270 7abb204b334ee296e44c043356c328f8 442 Pfam PF00817 impB/mucB/samB family 13 160 4.0E-32 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IX88_12270 7abb204b334ee296e44c043356c328f8 442 SUPERFAMILY SSF56672 9 248 8.9E-59 T 11-10-2018 IX88_12270 7abb204b334ee296e44c043356c328f8 442 Pfam PF13438 Domain of unknown function (DUF4113) 381 431 1.8E-12 T 11-10-2018 IPR025188 Domain of unknown function DUF4113 IX88_12270 7abb204b334ee296e44c043356c328f8 442 Pfam PF11799 impB/mucB/samB family C-terminal domain 254 363 7.7E-6 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IX88_12270 7abb204b334ee296e44c043356c328f8 442 Gene3D G3DSA:2.30.40.20 18 81 1.3E-37 T 11-10-2018 IX88_12270 7abb204b334ee296e44c043356c328f8 442 Gene3D G3DSA:3.30.70.270 12 165 1.3E-37 T 11-10-2018 IX88_12270 7abb204b334ee296e44c043356c328f8 442 Gene3D G3DSA:1.10.150.20 180 243 1.3E-6 T 11-10-2018 IX88_11100 605fecf95fc2ba932e9cb066984fa9b5 163 SUPERFAMILY SSF55729 32 161 2.97E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_11100 605fecf95fc2ba932e9cb066984fa9b5 163 Pfam PF00583 Acetyltransferase (GNAT) family 27 143 2.5E-16 T 11-10-2018 IPR000182 GNAT domain IX88_11100 605fecf95fc2ba932e9cb066984fa9b5 163 Gene3D G3DSA:3.40.630.30 6 162 1.2E-26 T 11-10-2018 IX88_14490 7fa3c71bc941c0d1b07c15d52a1eb76c 109 SUPERFAMILY SSF103481 4 105 7.59E-21 T 11-10-2018 IX88_14490 7fa3c71bc941c0d1b07c15d52a1eb76c 109 Gene3D G3DSA:1.10.3730.20 1 108 9.0E-39 T 11-10-2018 IX88_14490 7fa3c71bc941c0d1b07c15d52a1eb76c 109 Pfam PF00893 Small Multidrug Resistance protein 1 92 2.5E-29 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 IX88_09585 0fb840d2e11094d29772a7a535511edb 274 SUPERFAMILY SSF56601 49 263 5.46E-30 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like IX88_09585 0fb840d2e11094d29772a7a535511edb 274 Pfam PF00905 Penicillin binding protein transpeptidase domain 47 268 3.7E-28 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 IX88_09585 0fb840d2e11094d29772a7a535511edb 274 Gene3D G3DSA:3.40.710.10 25 274 8.4E-90 T 11-10-2018 IX88_06005 33dfa4835d16b27d0c3632c83a577ee9 476 SUPERFAMILY SSF53756 3 454 5.53E-122 T 11-10-2018 IX88_06005 33dfa4835d16b27d0c3632c83a577ee9 476 Gene3D G3DSA:3.40.50.2000 231 438 2.2E-144 T 11-10-2018 IX88_06005 33dfa4835d16b27d0c3632c83a577ee9 476 Pfam PF00982 Glycosyltransferase family 20 17 453 4.2E-117 T 11-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 IX88_06005 33dfa4835d16b27d0c3632c83a577ee9 476 Gene3D G3DSA:3.40.50.2000 21 450 2.2E-144 T 11-10-2018 IX88_09575 f961fc76e5a8c7058a9e492ef60e0500 197 SUPERFAMILY SSF47413 2 71 1.24E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IX88_09575 f961fc76e5a8c7058a9e492ef60e0500 197 Pfam PF01381 Helix-turn-helix 12 64 3.9E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IX88_09575 f961fc76e5a8c7058a9e492ef60e0500 197 Gene3D G3DSA:2.60.120.10 97 189 7.8E-10 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_09575 f961fc76e5a8c7058a9e492ef60e0500 197 SMART SM00530 11 66 1.1E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IX88_09575 f961fc76e5a8c7058a9e492ef60e0500 197 Gene3D G3DSA:1.10.260.40 2 78 1.7E-19 T 11-10-2018 IX88_09575 f961fc76e5a8c7058a9e492ef60e0500 197 SUPERFAMILY SSF51182 59 187 9.9E-20 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_15860 076b910e80772b2335ddd405cb17fa92 202 Pfam PF06821 Serine hydrolase 4 177 2.1E-52 T 11-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 IX88_15860 076b910e80772b2335ddd405cb17fa92 202 SUPERFAMILY SSF53474 3 179 2.15E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_15860 076b910e80772b2335ddd405cb17fa92 202 Gene3D G3DSA:3.40.50.1820 1 181 5.0E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_09955 02031b54a075178fb1d657d14f659126 594 SUPERFAMILY SSF53850 29 589 1.81E-93 T 11-10-2018 IX88_09955 02031b54a075178fb1d657d14f659126 594 Gene3D G3DSA:3.10.105.10 338 559 7.9E-36 T 11-10-2018 IX88_09955 02031b54a075178fb1d657d14f659126 594 PIRSF PIRSF002741 2 591 6.0E-64 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 IX88_09955 02031b54a075178fb1d657d14f659126 594 Gene3D G3DSA:3.90.76.10 44 217 2.5E-33 T 11-10-2018 IX88_09955 02031b54a075178fb1d657d14f659126 594 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 511 9.7E-79 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain IX88_09955 02031b54a075178fb1d657d14f659126 594 Gene3D G3DSA:3.40.190.10 218 337 3.0E-22 T 11-10-2018 IX88_11630 d80fc0141e6c41be3c14d7ff1a1423ac 217 SUPERFAMILY SSF100950 8 212 1.65E-64 T 11-10-2018 IPR037171 NagB/RpiA transferase-like IX88_11630 d80fc0141e6c41be3c14d7ff1a1423ac 217 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 47 55 - T 11-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 IX88_11630 d80fc0141e6c41be3c14d7ff1a1423ac 217 SMART SM00882 9 206 2.4E-65 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 IX88_11630 d80fc0141e6c41be3c14d7ff1a1423ac 217 Gene3D G3DSA:3.40.1080.10 4 215 7.5E-86 T 11-10-2018 IX88_11630 d80fc0141e6c41be3c14d7ff1a1423ac 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 212 2.4E-89 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 IX88_11630 d80fc0141e6c41be3c14d7ff1a1423ac 217 Pfam PF01144 Coenzyme A transferase 9 204 3.0E-38 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 IX88_05055 c016c3bff1e318bfa3cb235f283f4cc2 273 Pfam PF00106 short chain dehydrogenase 3 200 4.1E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05055 c016c3bff1e318bfa3cb235f283f4cc2 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 7.0E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05055 c016c3bff1e318bfa3cb235f283f4cc2 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 7.0E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05055 c016c3bff1e318bfa3cb235f283f4cc2 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 7.0E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05055 c016c3bff1e318bfa3cb235f283f4cc2 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 7.0E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05055 c016c3bff1e318bfa3cb235f283f4cc2 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 7.0E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05055 c016c3bff1e318bfa3cb235f283f4cc2 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 2.7E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05055 c016c3bff1e318bfa3cb235f283f4cc2 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 2.7E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05055 c016c3bff1e318bfa3cb235f283f4cc2 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.7E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_05055 c016c3bff1e318bfa3cb235f283f4cc2 273 Gene3D G3DSA:3.40.50.720 2 272 1.8E-68 T 11-10-2018 IX88_05055 c016c3bff1e318bfa3cb235f283f4cc2 273 SUPERFAMILY SSF51735 3 239 1.4E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_16430 ae562c3cbdc39e68898fe52fc16a041b 370 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 230 258 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 IX88_16430 ae562c3cbdc39e68898fe52fc16a041b 370 Gene3D G3DSA:3.40.190.10 40 185 2.0E-14 T 11-10-2018 IX88_16430 ae562c3cbdc39e68898fe52fc16a041b 370 SUPERFAMILY SSF53850 52 119 5.43E-8 T 11-10-2018 IX88_16430 ae562c3cbdc39e68898fe52fc16a041b 370 SUPERFAMILY SSF53955 167 360 7.31E-32 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily IX88_16430 ae562c3cbdc39e68898fe52fc16a041b 370 Pfam PF01464 Transglycosylase SLT domain 213 323 4.3E-21 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 IX88_16430 ae562c3cbdc39e68898fe52fc16a041b 370 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 57 119 1.2E-6 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IX88_16430 ae562c3cbdc39e68898fe52fc16a041b 370 Gene3D G3DSA:1.10.530.10 207 369 1.4E-34 T 11-10-2018 IX88_13735 37acde206baa024f79522bd82a7bc51c 411 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 5 410 7.8E-151 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 IX88_13735 37acde206baa024f79522bd82a7bc51c 411 Pfam PF03616 Sodium/glutamate symporter 5 379 2.4E-138 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 IX88_13735 37acde206baa024f79522bd82a7bc51c 411 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 3 410 24.896 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 IX88_00415 a48bd358515ad10a914b2b04724561fd 324 SUPERFAMILY SSF53187 1 320 2.48E-82 T 11-10-2018 IX88_00415 a48bd358515ad10a914b2b04724561fd 324 PIRSF PIRSF017020 1 324 2.8E-115 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 IX88_00415 a48bd358515ad10a914b2b04724561fd 324 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 324 138.521 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 IX88_00415 a48bd358515ad10a914b2b04724561fd 324 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 320 2.0E-135 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 IX88_00415 a48bd358515ad10a914b2b04724561fd 324 Gene3D G3DSA:3.40.630.10 1 324 3.8E-111 T 11-10-2018 IX88_00415 a48bd358515ad10a914b2b04724561fd 324 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 323 4.7E-54 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 IX88_00760 a6fd96e4b07f695b63a502098d4a991f 466 SUPERFAMILY SSF53244 325 461 1.72E-28 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IX88_00760 a6fd96e4b07f695b63a502098d4a991f 466 SUPERFAMILY SSF53623 114 323 1.96E-55 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IX88_00760 a6fd96e4b07f695b63a502098d4a991f 466 Gene3D G3DSA:3.40.1190.10 94 322 7.0E-92 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IX88_00760 a6fd96e4b07f695b63a502098d4a991f 466 Pfam PF08245 Mur ligase middle domain 120 303 8.6E-44 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 IX88_00760 a6fd96e4b07f695b63a502098d4a991f 466 Pfam PF01225 Mur ligase family, catalytic domain 36 104 1.8E-7 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 IX88_00760 a6fd96e4b07f695b63a502098d4a991f 466 Gene3D G3DSA:3.40.1390.10 1 93 5.4E-39 T 11-10-2018 IX88_00760 a6fd96e4b07f695b63a502098d4a991f 466 Gene3D G3DSA:3.90.190.20 323 466 7.1E-48 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IX88_00760 a6fd96e4b07f695b63a502098d4a991f 466 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 14 463 30.884 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_00760 a6fd96e4b07f695b63a502098d4a991f 466 SUPERFAMILY SSF63418 13 109 7.98E-23 T 11-10-2018 IPR035911 MurE/MurF, N-terminal IX88_00760 a6fd96e4b07f695b63a502098d4a991f 466 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 403 1.7E-12 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 IX88_00760 a6fd96e4b07f695b63a502098d4a991f 466 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 42 461 2.2E-127 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_17785 c5203415a807670cfe2fca03a2f5165a 204 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 202 15.843 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 IX88_17785 c5203415a807670cfe2fca03a2f5165a 204 Pfam PF04279 Intracellular septation protein A 1 201 2.1E-47 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 IX88_13700 12b64046697d9566e243b527eba4f72e 172 Pfam PF05229 Spore Coat Protein U domain 26 168 5.8E-27 T 11-10-2018 IPR007893 Spore coat protein U IX88_15625 b4be04606178e6a5536cb7645f13e97b 480 SUPERFAMILY SSF48173 200 478 1.31E-107 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 IX88_15625 b4be04606178e6a5536cb7645f13e97b 480 Pfam PF03441 FAD binding domain of DNA photolyase 286 478 4.9E-83 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 IX88_15625 b4be04606178e6a5536cb7645f13e97b 480 Gene3D G3DSA:3.40.50.620 7 213 3.5E-73 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_15625 b4be04606178e6a5536cb7645f13e97b 480 PRINTS PR00147 DNA photolyase signature 356 374 1.2E-23 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 IX88_15625 b4be04606178e6a5536cb7645f13e97b 480 PRINTS PR00147 DNA photolyase signature 395 409 1.2E-23 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 IX88_15625 b4be04606178e6a5536cb7645f13e97b 480 PRINTS PR00147 DNA photolyase signature 145 161 1.2E-23 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 IX88_15625 b4be04606178e6a5536cb7645f13e97b 480 PRINTS PR00147 DNA photolyase signature 336 352 1.2E-23 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 IX88_15625 b4be04606178e6a5536cb7645f13e97b 480 Gene3D G3DSA:1.25.40.80 136 297 3.5E-73 T 11-10-2018 IX88_15625 b4be04606178e6a5536cb7645f13e97b 480 Gene3D G3DSA:1.10.579.10 304 480 8.3E-81 T 11-10-2018 IX88_15625 b4be04606178e6a5536cb7645f13e97b 480 SUPERFAMILY SSF52425 5 194 2.49E-45 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 IX88_15625 b4be04606178e6a5536cb7645f13e97b 480 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 336 348 - T 11-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal IX88_15625 b4be04606178e6a5536cb7645f13e97b 480 Pfam PF00875 DNA photolyase 7 171 2.2E-38 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 IX88_04080 90886db2e985a464d5e517a9ad0c8547 1232 SUPERFAMILY SSF52980 923 1223 4.08E-61 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 IX88_04080 90886db2e985a464d5e517a9ad0c8547 1232 Pfam PF13361 UvrD-like helicase C-terminal domain 479 647 4.3E-10 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 IX88_04080 90886db2e985a464d5e517a9ad0c8547 1232 Gene3D G3DSA:1.10.486.10 611 757 8.8E-71 T 11-10-2018 IX88_04080 90886db2e985a464d5e517a9ad0c8547 1232 Gene3D G3DSA:3.40.50.300 484 864 8.8E-71 T 11-10-2018 IX88_04080 90886db2e985a464d5e517a9ad0c8547 1232 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 8 1224 15.739 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 IX88_04080 90886db2e985a464d5e517a9ad0c8547 1232 SUPERFAMILY SSF52540 15 860 7.83E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04080 90886db2e985a464d5e517a9ad0c8547 1232 Gene3D G3DSA:1.10.3170.10 162 380 1.8E-74 T 11-10-2018 IX88_04080 90886db2e985a464d5e517a9ad0c8547 1232 Gene3D G3DSA:3.40.50.300 13 470 1.8E-74 T 11-10-2018 IX88_04080 90886db2e985a464d5e517a9ad0c8547 1232 Pfam PF00580 UvrD/REP helicase N-terminal domain 19 471 2.9E-48 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 IX88_04080 90886db2e985a464d5e517a9ad0c8547 1232 Pfam PF13361 UvrD-like helicase C-terminal domain 687 857 2.9E-15 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 IX88_04080 90886db2e985a464d5e517a9ad0c8547 1232 Gene3D G3DSA:3.90.320.10 917 1229 8.0E-71 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal IX88_04080 90886db2e985a464d5e517a9ad0c8547 1232 Pfam PF12705 PD-(D/E)XK nuclease superfamily 986 1196 4.4E-6 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type IX88_11315 0fb7623f2872e0b3612a5d4500064f3d 339 SUPERFAMILY SSF56281 78 327 2.03E-36 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_11315 0fb7623f2872e0b3612a5d4500064f3d 339 PIRSF PIRSF038896 5 330 7.1E-91 T 11-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 IX88_11315 0fb7623f2872e0b3612a5d4500064f3d 339 Gene3D G3DSA:3.60.15.10 62 335 5.5E-79 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_11315 0fb7623f2872e0b3612a5d4500064f3d 339 Pfam PF12706 Beta-lactamase superfamily domain 95 287 3.7E-44 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_14910 50b464822eac9c5678a5cf67e3b5ecdd 158 Pfam PF10045 Uncharacterized conserved protein (DUF2280) 1 101 1.5E-36 T 11-10-2018 IPR018738 Protein of unknown function DUF2280 IX88_06790 f4547970d21fc3be886a3eab6c74e262 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 IX88_06790 f4547970d21fc3be886a3eab6c74e262 488 SUPERFAMILY SSF53720 4 479 3.8E-158 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_06790 f4547970d21fc3be886a3eab6c74e262 488 Gene3D G3DSA:3.40.605.10 15 470 1.1E-167 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_06790 f4547970d21fc3be886a3eab6c74e262 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 IX88_06790 f4547970d21fc3be886a3eab6c74e262 488 Pfam PF00171 Aldehyde dehydrogenase family 15 475 7.2E-169 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_06790 f4547970d21fc3be886a3eab6c74e262 488 Gene3D G3DSA:3.40.309.10 252 445 1.1E-167 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_14320 87a67b177ecc613d78696ffaa9106172 81 Gene3D G3DSA:3.30.110.40 2 81 2.9E-13 T 11-10-2018 IPR036868 TusA-like domain superfamily IX88_14320 87a67b177ecc613d78696ffaa9106172 81 Pfam PF01206 Sulfurtransferase TusA 11 79 3.7E-15 T 11-10-2018 IPR001455 TusA-like domain IX88_14320 87a67b177ecc613d78696ffaa9106172 81 SUPERFAMILY SSF64307 7 79 6.28E-16 T 11-10-2018 IPR036868 TusA-like domain superfamily IX88_16075 a78ea7e24178129c82ce10af4d940661 319 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 13 277 3.0E-36 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 IX88_16075 a78ea7e24178129c82ce10af4d940661 319 PIRSF PIRSF026649 1 285 8.1E-67 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 IX88_16830 1cf9a1a8d3ffe017ef9736aa46a3b98f 325 SUPERFAMILY SSF48576 6 323 2.24E-95 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily IX88_16830 1cf9a1a8d3ffe017ef9736aa46a3b98f 325 Pfam PF00348 Polyprenyl synthetase 36 263 1.7E-72 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 IX88_16830 1cf9a1a8d3ffe017ef9736aa46a3b98f 325 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 206 218 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site IX88_16830 1cf9a1a8d3ffe017ef9736aa46a3b98f 325 Gene3D G3DSA:1.10.600.10 1 325 3.7E-108 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily IX88_16830 1cf9a1a8d3ffe017ef9736aa46a3b98f 325 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 85 99 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site IX88_01785 10b7102497885faee0a1b043ac070a84 266 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 182 192 - T 11-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_01785 10b7102497885faee0a1b043ac070a84 266 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 73 81 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_01785 10b7102497885faee0a1b043ac070a84 266 SUPERFAMILY SSF53681 111 261 1.14E-32 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_01785 10b7102497885faee0a1b043ac070a84 266 Hamap MF_00258 Glutamate racemase [murI]. 6 258 32.649 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_01785 10b7102497885faee0a1b043ac070a84 266 Gene3D G3DSA:3.40.50.1860 7 243 1.0E-78 T 11-10-2018 IX88_01785 10b7102497885faee0a1b043ac070a84 266 Gene3D G3DSA:3.40.50.1860 98 209 1.0E-78 T 11-10-2018 IX88_01785 10b7102497885faee0a1b043ac070a84 266 TIGRFAM TIGR00067 glut_race: glutamate racemase 8 236 7.6E-63 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_01785 10b7102497885faee0a1b043ac070a84 266 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 217 2.8E-33 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_01785 10b7102497885faee0a1b043ac070a84 266 SUPERFAMILY SSF53681 7 109 1.21E-30 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_11480 cc2f2199e751b2be51d5806ad01b782e 425 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 192 424 7.1E-18 T 11-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 IX88_11480 cc2f2199e751b2be51d5806ad01b782e 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 60 75 1.0E-36 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_11480 cc2f2199e751b2be51d5806ad01b782e 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 144 170 1.0E-36 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_11480 cc2f2199e751b2be51d5806ad01b782e 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 81 101 1.0E-36 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_11480 cc2f2199e751b2be51d5806ad01b782e 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 30 55 1.0E-36 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_11480 cc2f2199e751b2be51d5806ad01b782e 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 102 122 1.0E-36 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_11480 cc2f2199e751b2be51d5806ad01b782e 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 185 207 1.0E-36 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_11480 cc2f2199e751b2be51d5806ad01b782e 425 Gene3D G3DSA:2.102.10.10 45 168 1.5E-112 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_11480 cc2f2199e751b2be51d5806ad01b782e 425 Pfam PF00355 Rieske [2Fe-2S] domain 45 129 8.5E-22 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 IX88_11480 cc2f2199e751b2be51d5806ad01b782e 425 Gene3D G3DSA:3.90.380.10 22 423 1.5E-112 T 11-10-2018 IX88_11480 cc2f2199e751b2be51d5806ad01b782e 425 SUPERFAMILY SSF55961 163 425 9.42E-52 T 11-10-2018 IX88_11480 cc2f2199e751b2be51d5806ad01b782e 425 SUPERFAMILY SSF50022 13 159 2.75E-49 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_14775 ba4334542c895178c29e4d34926ce977 180 Gene3D G3DSA:1.20.141.10 2 180 4.5E-42 T 11-10-2018 IX88_14775 ba4334542c895178c29e4d34926ce977 180 SUPERFAMILY SSF53955 1 179 7.31E-46 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily IX88_14775 ba4334542c895178c29e4d34926ce977 180 Pfam PF05838 Glycosyl hydrolase 108 8 90 8.9E-24 T 11-10-2018 IPR008565 Protein of unknown function DUF847 IX88_14775 ba4334542c895178c29e4d34926ce977 180 Pfam PF09374 Predicted Peptidoglycan domain 97 178 1.4E-16 T 11-10-2018 IPR018537 Peptidoglycan binding domain IX88_05505 07cffdbe524e747b71dab1492e2f2f1b 106 SUPERFAMILY SSF103481 6 104 8.63E-21 T 11-10-2018 IX88_05505 07cffdbe524e747b71dab1492e2f2f1b 106 Gene3D G3DSA:1.10.3730.20 1 106 3.5E-32 T 11-10-2018 IX88_05505 07cffdbe524e747b71dab1492e2f2f1b 106 Pfam PF00893 Small Multidrug Resistance protein 1 93 7.9E-29 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 IX88_02070 51e72c0ae735d15a7f7c6d7d52468377 609 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 8.7E-253 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 IX88_02070 51e72c0ae735d15a7f7c6d7d52468377 609 Gene3D G3DSA:3.50.30.80 421 572 4.7E-56 T 11-10-2018 IX88_02070 51e72c0ae735d15a7f7c6d7d52468377 609 SUPERFAMILY SSF143975 3 420 1.7E-137 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 IX88_02070 51e72c0ae735d15a7f7c6d7d52468377 609 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 IX88_02070 51e72c0ae735d15a7f7c6d7d52468377 609 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 608 44.846 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 IX88_02070 51e72c0ae735d15a7f7c6d7d52468377 609 Pfam PF00920 Dehydratase family 34 605 1.5E-224 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 IX88_02070 51e72c0ae735d15a7f7c6d7d52468377 609 SUPERFAMILY SSF52016 421 607 9.42E-61 T 11-10-2018 IX88_02070 51e72c0ae735d15a7f7c6d7d52468377 609 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 IX88_17135 7398c4ecaa55dcda48201b7a87d2d59a 491 TIGRFAM TIGR00835 agcS: amino acid carrier protein 21 461 2.6E-149 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 IX88_17135 7398c4ecaa55dcda48201b7a87d2d59a 491 Pfam PF01235 Sodium:alanine symporter family 60 474 2.8E-150 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 IX88_17135 7398c4ecaa55dcda48201b7a87d2d59a 491 PRINTS PR00175 Sodium/alanine symporter signature 370 392 2.6E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 IX88_17135 7398c4ecaa55dcda48201b7a87d2d59a 491 PRINTS PR00175 Sodium/alanine symporter signature 325 343 2.6E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 IX88_17135 7398c4ecaa55dcda48201b7a87d2d59a 491 PRINTS PR00175 Sodium/alanine symporter signature 430 450 2.6E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 IX88_17135 7398c4ecaa55dcda48201b7a87d2d59a 491 PRINTS PR00175 Sodium/alanine symporter signature 96 118 2.6E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 IX88_17135 7398c4ecaa55dcda48201b7a87d2d59a 491 PRINTS PR00175 Sodium/alanine symporter signature 230 249 2.6E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 IX88_17135 7398c4ecaa55dcda48201b7a87d2d59a 491 PRINTS PR00175 Sodium/alanine symporter signature 202 220 2.6E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 IX88_17135 7398c4ecaa55dcda48201b7a87d2d59a 491 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 96 111 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 IX88_15320 33e4641c8acd80a97828406d837d8844 707 Pfam PF00563 EAL domain 462 696 4.2E-24 T 11-10-2018 IPR001633 EAL domain IX88_15320 33e4641c8acd80a97828406d837d8844 707 Gene3D G3DSA:3.30.450.20 156 264 1.7E-7 T 11-10-2018 IX88_15320 33e4641c8acd80a97828406d837d8844 707 SUPERFAMILY SSF55785 146 232 7.85E-7 T 11-10-2018 IPR035965 PAS domain superfamily IX88_15320 33e4641c8acd80a97828406d837d8844 707 SUPERFAMILY SSF141868 462 696 1.1E-26 T 11-10-2018 IPR035919 EAL domain superfamily IX88_15320 33e4641c8acd80a97828406d837d8844 707 Gene3D G3DSA:3.20.20.450 459 705 1.1E-26 T 11-10-2018 IPR035919 EAL domain superfamily IX88_15320 33e4641c8acd80a97828406d837d8844 707 SMART SM00052 456 702 1.9E-7 T 11-10-2018 IPR001633 EAL domain IX88_06975 418bf21ba330abf0ffb64fdaefd226ce 302 SUPERFAMILY SSF53850 92 299 7.12E-32 T 11-10-2018 IX88_06975 418bf21ba330abf0ffb64fdaefd226ce 302 Gene3D G3DSA:1.10.10.10 3 88 2.0E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_06975 418bf21ba330abf0ffb64fdaefd226ce 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.9E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_06975 418bf21ba330abf0ffb64fdaefd226ce 302 SUPERFAMILY SSF46785 5 115 3.01E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_06975 418bf21ba330abf0ffb64fdaefd226ce 302 Gene3D G3DSA:3.40.190.10 96 290 5.4E-52 T 11-10-2018 IX88_06975 418bf21ba330abf0ffb64fdaefd226ce 302 Pfam PF03466 LysR substrate binding domain 91 294 7.8E-41 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_06975 418bf21ba330abf0ffb64fdaefd226ce 302 Gene3D G3DSA:3.40.190.10 165 268 5.4E-52 T 11-10-2018 IX88_15555 eb359ed81b0dd6bfa41c120941e415cd 271 SUPERFAMILY SSF54506 2 269 1.3E-70 T 11-10-2018 IX88_15555 eb359ed81b0dd6bfa41c120941e415cd 271 Gene3D G3DSA:3.10.310.10 117 259 7.1E-82 T 11-10-2018 IX88_15555 eb359ed81b0dd6bfa41c120941e415cd 271 Gene3D G3DSA:3.10.310.10 3 262 7.1E-82 T 11-10-2018 IX88_15555 eb359ed81b0dd6bfa41c120941e415cd 271 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 228 3.6E-38 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 IX88_15555 eb359ed81b0dd6bfa41c120941e415cd 271 PIRSF PIRSF016184 1 270 6.3E-49 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 IX88_15555 eb359ed81b0dd6bfa41c120941e415cd 271 Pfam PF02567 Phenazine biosynthesis-like protein 6 265 1.7E-55 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 IX88_03415 f86bfbafee15bea03ed94139e888bffb 335 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 85 311 5.3E-60 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 IX88_03415 f86bfbafee15bea03ed94139e888bffb 335 SUPERFAMILY SSF56601 80 328 1.88E-57 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like IX88_03415 f86bfbafee15bea03ed94139e888bffb 335 Gene3D G3DSA:3.40.710.10 74 330 4.1E-67 T 11-10-2018 IX88_03415 f86bfbafee15bea03ed94139e888bffb 335 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 196 209 1.4E-12 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 IX88_03415 f86bfbafee15bea03ed94139e888bffb 335 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 117 128 1.4E-12 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 IX88_03415 f86bfbafee15bea03ed94139e888bffb 335 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 169 186 1.4E-12 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 IX88_17930 59ebd8e07a8a915c84be8b468b2ee44e 270 Gene3D G3DSA:3.40.50.150 8 203 2.2E-68 T 11-10-2018 IX88_17930 59ebd8e07a8a915c84be8b468b2ee44e 270 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 46 73 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 IX88_17930 59ebd8e07a8a915c84be8b468b2ee44e 270 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 15 267 1.7E-86 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 IX88_17930 59ebd8e07a8a915c84be8b468b2ee44e 270 SUPERFAMILY SSF53335 10 268 2.61E-77 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_17930 59ebd8e07a8a915c84be8b468b2ee44e 270 Gene3D G3DSA:1.10.8.100 207 270 5.0E-22 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 IX88_17930 59ebd8e07a8a915c84be8b468b2ee44e 270 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 14 269 58.219 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 IX88_17930 59ebd8e07a8a915c84be8b468b2ee44e 270 SMART SM00650 30 202 7.5E-83 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 IX88_17930 59ebd8e07a8a915c84be8b468b2ee44e 270 Pfam PF00398 Ribosomal RNA adenine dimethylase 14 266 1.1E-66 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm IX88_15750 9225acbd91cb9c623658103d5274593e 136 Gene3D G3DSA:2.170.150.70 1 114 4.8E-15 T 11-10-2018 IX88_15750 9225acbd91cb9c623658103d5274593e 136 SUPERFAMILY SSF51316 2 126 6.8E-34 T 11-10-2018 IPR011057 Mss4-like superfamily IX88_15750 9225acbd91cb9c623658103d5274593e 136 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 23 109 5.1E-14 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 IX88_09435 d171cb535b154114b76bfdbc1ca502f0 156 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 4.2E-18 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IX88_09435 d171cb535b154114b76bfdbc1ca502f0 156 Gene3D G3DSA:3.30.70.920 56 140 2.3E-19 T 11-10-2018 IX88_09435 d171cb535b154114b76bfdbc1ca502f0 156 SUPERFAMILY SSF54909 68 144 2.32E-14 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel IX88_09435 d171cb535b154114b76bfdbc1ca502f0 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 47 8.8E-10 T 11-10-2018 IX88_09435 d171cb535b154114b76bfdbc1ca502f0 156 SMART SM00344 3 112 9.3E-22 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 IX88_09435 d171cb535b154114b76bfdbc1ca502f0 156 SUPERFAMILY SSF46785 2 104 2.83E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_09435 d171cb535b154114b76bfdbc1ca502f0 156 Gene3D G3DSA:1.10.10.10 1 55 2.3E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_15235 e44443cca49601001463a8935d357056 313 Gene3D G3DSA:1.10.3470.10 1 313 2.2E-61 T 11-10-2018 IPR037294 ABC transporter, BtuC-like IX88_15235 e44443cca49601001463a8935d357056 313 Pfam PF01032 FecCD transport family 9 310 3.1E-63 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 IX88_15235 e44443cca49601001463a8935d357056 313 SUPERFAMILY SSF81345 4 310 2.09E-64 T 11-10-2018 IPR037294 ABC transporter, BtuC-like IX88_11505 a3cb9374bc551abbe35bd9bcb0b00f12 155 SMART SM00347 38 138 1.2E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IX88_11505 a3cb9374bc551abbe35bd9bcb0b00f12 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 94 3.2E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IX88_11505 a3cb9374bc551abbe35bd9bcb0b00f12 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 98 114 3.2E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IX88_11505 a3cb9374bc551abbe35bd9bcb0b00f12 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 128 148 3.2E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IX88_11505 a3cb9374bc551abbe35bd9bcb0b00f12 155 Pfam PF01047 MarR family 58 102 2.3E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IX88_11505 a3cb9374bc551abbe35bd9bcb0b00f12 155 Gene3D G3DSA:1.10.10.10 3 152 5.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_11505 a3cb9374bc551abbe35bd9bcb0b00f12 155 SUPERFAMILY SSF46785 17 152 1.89E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_18235 5e0766008815047a1310e1d72c186ff8 85 Gene3D G3DSA:1.10.150.250 3 84 7.6E-21 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily IX88_18235 5e0766008815047a1310e1d72c186ff8 85 SUPERFAMILY SSF109910 6 81 8.24E-19 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily IX88_18235 5e0766008815047a1310e1d72c186ff8 85 Pfam PF03937 Flavinator of succinate dehydrogenase 10 76 6.9E-18 T 11-10-2018 IPR005631 Flavinator of succinate dehydrogenase IX88_01435 98ebbb55657c0c743845c9ba22a2cf5a 300 Gene3D G3DSA:3.30.230.20 1 127 4.3E-43 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 IX88_01435 98ebbb55657c0c743845c9ba22a2cf5a 300 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 42.765 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 IX88_01435 98ebbb55657c0c743845c9ba22a2cf5a 300 SUPERFAMILY SSF54211 3 125 5.84E-38 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_01435 98ebbb55657c0c743845c9ba22a2cf5a 300 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 274 5.6E-97 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 IX88_01435 98ebbb55657c0c743845c9ba22a2cf5a 300 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 297 4.3E-111 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 IX88_01435 98ebbb55657c0c743845c9ba22a2cf5a 300 SUPERFAMILY SSF54211 133 277 7.59E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_01435 98ebbb55657c0c743845c9ba22a2cf5a 300 Gene3D G3DSA:3.30.1700.10 128 300 1.1E-62 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 IX88_11890 be3154b1485247f98a4bcea4f58ebd5a 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 171 189 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 IX88_11890 be3154b1485247f98a4bcea4f58ebd5a 264 Hamap MF_01974 Methionine aminopeptidase [map]. 6 254 41.376 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 IX88_11890 be3154b1485247f98a4bcea4f58ebd5a 264 Gene3D G3DSA:3.90.230.10 4 256 4.3E-107 T 11-10-2018 IX88_11890 be3154b1485247f98a4bcea4f58ebd5a 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 7 252 2.2E-98 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 IX88_11890 be3154b1485247f98a4bcea4f58ebd5a 264 SUPERFAMILY SSF55920 7 257 2.09E-90 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like IX88_11890 be3154b1485247f98a4bcea4f58ebd5a 264 Pfam PF00557 Metallopeptidase family M24 15 245 8.8E-52 T 11-10-2018 IPR000994 Peptidase M24 IX88_11890 be3154b1485247f98a4bcea4f58ebd5a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 4.7E-23 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 IX88_11890 be3154b1485247f98a4bcea4f58ebd5a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 95 111 4.7E-23 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 IX88_11890 be3154b1485247f98a4bcea4f58ebd5a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 165 177 4.7E-23 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 IX88_11890 be3154b1485247f98a4bcea4f58ebd5a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 72 85 4.7E-23 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 IX88_09670 ee5208fda36b8de5a3322efb7c1212db 232 Gene3D G3DSA:3.40.50.1220 5 203 2.5E-64 T 11-10-2018 IX88_09670 ee5208fda36b8de5a3322efb7c1212db 232 Gene3D G3DSA:3.30.1600.10 18 154 2.5E-64 T 11-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily IX88_09670 ee5208fda36b8de5a3322efb7c1212db 232 Pfam PF02146 Sir2 family 9 182 2.0E-47 T 11-10-2018 IPR003000 Sirtuin family GO:0070403 IX88_09670 ee5208fda36b8de5a3322efb7c1212db 232 SUPERFAMILY SSF52467 3 230 1.1E-65 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily IX88_12635 e1c0b735dea240fbf2fa6eab694b0663 66 Gene3D G3DSA:1.10.260.40 2 62 1.3E-6 T 11-10-2018 IX88_12635 e1c0b735dea240fbf2fa6eab694b0663 66 Pfam PF01381 Helix-turn-helix 11 52 1.1E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IX88_12635 e1c0b735dea240fbf2fa6eab694b0663 66 SUPERFAMILY SSF47413 10 41 2.82E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IX88_15525 958bf89d7c040f40e902cedb0e7b4adb 203 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 4 187 1.8E-48 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 IX88_15525 958bf89d7c040f40e902cedb0e7b4adb 203 Pfam PF02581 Thiamine monophosphate synthase 4 183 8.8E-53 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 IX88_15525 958bf89d7c040f40e902cedb0e7b4adb 203 Gene3D G3DSA:3.20.20.70 2 203 3.9E-50 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_15525 958bf89d7c040f40e902cedb0e7b4adb 203 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 2 203 22.115 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 IX88_15525 958bf89d7c040f40e902cedb0e7b4adb 203 SUPERFAMILY SSF51391 3 187 1.7E-50 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 IX88_13220 49ceecd317d5ddd10498eeb50264d89b 473 SMART SM01230 149 394 2.0E-77 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 IX88_13220 49ceecd317d5ddd10498eeb50264d89b 473 SUPERFAMILY SSF54368 53 146 8.37E-5 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 IX88_13220 49ceecd317d5ddd10498eeb50264d89b 473 Gene3D G3DSA:3.30.590.10 147 472 4.8E-87 T 11-10-2018 IX88_13220 49ceecd317d5ddd10498eeb50264d89b 473 Pfam PF00120 Glutamine synthetase, catalytic domain 151 470 1.3E-85 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 IX88_13220 49ceecd317d5ddd10498eeb50264d89b 473 SUPERFAMILY SSF55931 150 471 9.81E-87 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 IX88_16960 43dee724c9e2d3ddd1f725759424a1b1 153 SUPERFAMILY SSF141322 86 149 1.44E-6 T 11-10-2018 IX88_16960 43dee724c9e2d3ddd1f725759424a1b1 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 9 150 3.7E-16 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain IX88_16960 43dee724c9e2d3ddd1f725759424a1b1 153 Gene3D G3DSA:2.40.50.140 77 153 1.1E-9 T 11-10-2018 IX88_08285 7ef37c1c67c6eac05eb4c5b62fac9885 62 Pfam PF09374 Predicted Peptidoglycan domain 21 62 9.7E-9 T 11-10-2018 IPR018537 Peptidoglycan binding domain IX88_08285 7ef37c1c67c6eac05eb4c5b62fac9885 62 SUPERFAMILY SSF53955 19 62 2.53E-5 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily IX88_07560 682e9507442973161c840bc60a4a1a91 1083 Gene3D G3DSA:3.40.50.300 542 776 5.2E-22 T 11-10-2018 IX88_07560 682e9507442973161c840bc60a4a1a91 1083 SUPERFAMILY SSF52540 300 569 2.28E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_07560 682e9507442973161c840bc60a4a1a91 1083 Pfam PF04851 Type III restriction enzyme, res subunit 311 471 3.7E-13 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 IX88_07560 682e9507442973161c840bc60a4a1a91 1083 SMART SM00487 307 542 2.2E-9 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain IX88_07560 682e9507442973161c840bc60a4a1a91 1083 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 13 235 4.8E-10 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 IX88_07560 682e9507442973161c840bc60a4a1a91 1083 Gene3D G3DSA:3.40.50.300 311 523 3.0E-22 T 11-10-2018 IX88_12235 859f1270e2337ffd1de9e91078a83d9c 209 Gene3D G3DSA:3.90.550.10 8 205 4.3E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_12235 859f1270e2337ffd1de9e91078a83d9c 209 Pfam PF12804 MobA-like NTP transferase domain 11 155 2.2E-23 T 11-10-2018 IPR025877 MobA-like NTP transferase IX88_12235 859f1270e2337ffd1de9e91078a83d9c 209 SUPERFAMILY SSF53448 10 195 2.54E-21 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_12235 859f1270e2337ffd1de9e91078a83d9c 209 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 6 196 18.707 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 IX88_16435 0ec0dda73fea8520903e6d956dce3650 127 Gene3D G3DSA:3.30.1050.10 8 118 1.4E-12 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily IX88_16435 0ec0dda73fea8520903e6d956dce3650 127 Pfam PF02036 SCP-2 sterol transfer family 34 108 1.7E-7 T 11-10-2018 IPR003033 SCP2 sterol-binding domain IX88_16435 0ec0dda73fea8520903e6d956dce3650 127 SUPERFAMILY SSF55718 4 108 3.3E-12 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily IX88_08505 85c47d9513035a97fc665ea8bd152e88 254 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 245 44.854 T 11-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 IX88_08505 85c47d9513035a97fc665ea8bd152e88 254 SUPERFAMILY SSF88713 1 251 2.52E-101 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 IX88_08505 85c47d9513035a97fc665ea8bd152e88 254 Pfam PF03746 LamB/YcsF family 3 240 2.9E-100 T 11-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 IX88_08505 85c47d9513035a97fc665ea8bd152e88 254 Gene3D G3DSA:3.20.20.370 1 253 1.3E-101 T 11-10-2018 IX88_15715 a8f4c0a3f8ccad7e74a77acc09c2b83a 314 SUPERFAMILY SSF103481 196 283 7.06E-7 T 11-10-2018 IX88_15715 a8f4c0a3f8ccad7e74a77acc09c2b83a 314 SUPERFAMILY SSF103481 36 139 4.58E-9 T 11-10-2018 IX88_15715 a8f4c0a3f8ccad7e74a77acc09c2b83a 314 TIGRFAM TIGR00688 rarD: protein RarD 3 255 7.2E-55 T 11-10-2018 IPR004626 RarD protein GO:0005887 IX88_15715 a8f4c0a3f8ccad7e74a77acc09c2b83a 314 Pfam PF00892 EamA-like transporter family 3 139 8.0E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_17895 54e2ba5b0f1d996940a107bccc13ab4a 541 Gene3D G3DSA:3.30.870.10 79 277 4.9E-37 T 11-10-2018 IX88_17895 54e2ba5b0f1d996940a107bccc13ab4a 541 SUPERFAMILY SSF56024 329 505 6.87E-29 T 11-10-2018 IX88_17895 54e2ba5b0f1d996940a107bccc13ab4a 541 SMART SM00155 183 210 0.0011 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 IX88_17895 54e2ba5b0f1d996940a107bccc13ab4a 541 SMART SM00155 433 459 2.6E-4 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 IX88_17895 54e2ba5b0f1d996940a107bccc13ab4a 541 SUPERFAMILY SSF56024 33 258 1.26E-43 T 11-10-2018 IX88_17895 54e2ba5b0f1d996940a107bccc13ab4a 541 Pfam PF13091 PLD-like domain 94 242 1.5E-16 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 IX88_17895 54e2ba5b0f1d996940a107bccc13ab4a 541 Pfam PF13091 PLD-like domain 331 485 1.7E-20 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 IX88_17895 54e2ba5b0f1d996940a107bccc13ab4a 541 Gene3D G3DSA:3.30.870.10 308 508 1.3E-36 T 11-10-2018 IX88_11780 e496baa56d85235b092cded66847e617 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 156 9.3E-22 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_11780 e496baa56d85235b092cded66847e617 699 Pfam PF00593 TonB dependent receptor 230 698 5.4E-58 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_11780 e496baa56d85235b092cded66847e617 699 SUPERFAMILY SSF56935 23 699 1.95E-127 T 11-10-2018 IX88_11780 e496baa56d85235b092cded66847e617 699 Gene3D G3DSA:2.170.130.10 45 166 2.9E-35 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_11780 e496baa56d85235b092cded66847e617 699 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 63 699 5.2E-102 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 IX88_11780 e496baa56d85235b092cded66847e617 699 Gene3D G3DSA:2.40.170.20 167 699 2.8E-117 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IX88_04970 36e3c4140da9389dff038928e2f05311 270 Pfam PF01026 TatD related DNase 4 267 4.2E-56 T 11-10-2018 IPR001130 TatD family GO:0016788 IX88_04970 36e3c4140da9389dff038928e2f05311 270 Gene3D G3DSA:3.20.20.140 1 268 7.0E-69 T 11-10-2018 IX88_04970 36e3c4140da9389dff038928e2f05311 270 SUPERFAMILY SSF51556 3 268 5.92E-68 T 11-10-2018 IPR032466 Metal-dependent hydrolase IX88_04970 36e3c4140da9389dff038928e2f05311 270 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 IX88_04970 36e3c4140da9389dff038928e2f05311 270 PIRSF PIRSF005902 1 270 4.7E-57 T 11-10-2018 IPR001130 TatD family GO:0016788 IX88_11435 e35e7870f4158f6f32a5b3641ec5c1d8 820 Gene3D G3DSA:2.30.120.10 346 418 2.6E-187 T 11-10-2018 IX88_11435 e35e7870f4158f6f32a5b3641ec5c1d8 820 SUPERFAMILY SSF56235 39 819 9.77E-182 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IX88_11435 e35e7870f4158f6f32a5b3641ec5c1d8 820 Gene3D G3DSA:1.10.439.10 37 183 1.2E-42 T 11-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 IX88_11435 e35e7870f4158f6f32a5b3641ec5c1d8 820 PIRSF PIRSF001227 22 820 1.8E-113 T 11-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 IX88_11435 e35e7870f4158f6f32a5b3641ec5c1d8 820 Pfam PF01804 Penicillin amidase 42 809 6.2E-136 T 11-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 IX88_11435 e35e7870f4158f6f32a5b3641ec5c1d8 820 Gene3D G3DSA:1.10.1400.10 561 720 2.6E-187 T 11-10-2018 IX88_11435 e35e7870f4158f6f32a5b3641ec5c1d8 820 Gene3D G3DSA:3.60.20.10 280 799 2.6E-187 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IX88_11435 e35e7870f4158f6f32a5b3641ec5c1d8 820 Gene3D G3DSA:1.10.287.150 184 241 2.0E-23 T 11-10-2018 IX88_07960 f1a634eb1da85e6c3a793f904ecbd053 341 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 167 322 2.1E-51 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_07960 f1a634eb1da85e6c3a793f904ecbd053 341 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 160 167 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_07960 f1a634eb1da85e6c3a793f904ecbd053 341 Gene3D G3DSA:3.40.50.720 3 336 2.3E-128 T 11-10-2018 IX88_07960 f1a634eb1da85e6c3a793f904ecbd053 341 SUPERFAMILY SSF55347 162 323 5.66E-57 T 11-10-2018 IX88_07960 f1a634eb1da85e6c3a793f904ecbd053 341 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 112 5.1E-34 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_07960 f1a634eb1da85e6c3a793f904ecbd053 341 PIRSF PIRSF000149 1 340 9.8E-115 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_07960 f1a634eb1da85e6c3a793f904ecbd053 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 239 256 4.7E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_07960 f1a634eb1da85e6c3a793f904ecbd053 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 279 294 4.7E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_07960 f1a634eb1da85e6c3a793f904ecbd053 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 183 199 4.7E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_07960 f1a634eb1da85e6c3a793f904ecbd053 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 156 174 4.7E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_07960 f1a634eb1da85e6c3a793f904ecbd053 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 119 132 4.7E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_07960 f1a634eb1da85e6c3a793f904ecbd053 341 Gene3D G3DSA:3.30.360.10 161 324 2.3E-128 T 11-10-2018 IX88_07960 f1a634eb1da85e6c3a793f904ecbd053 341 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 334 1.7E-110 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_07960 f1a634eb1da85e6c3a793f904ecbd053 341 SUPERFAMILY SSF51735 3 178 4.06E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_07960 f1a634eb1da85e6c3a793f904ecbd053 341 SMART SM00846 2 162 6.1E-71 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_12870 115f25391cc6ba16a4c9dbf72afeee98 147 PIRSF PIRSF006276 1 147 3.1E-22 T 11-10-2018 IPR006015 Universal stress protein A IX88_12870 115f25391cc6ba16a4c9dbf72afeee98 147 SUPERFAMILY SSF52402 1 146 5.61E-36 T 11-10-2018 IX88_12870 115f25391cc6ba16a4c9dbf72afeee98 147 Gene3D G3DSA:3.40.50.620 1 147 6.2E-36 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_12870 115f25391cc6ba16a4c9dbf72afeee98 147 Pfam PF00582 Universal stress protein family 3 146 4.2E-29 T 11-10-2018 IPR006016 UspA IX88_12870 115f25391cc6ba16a4c9dbf72afeee98 147 PRINTS PR01438 Universal stress protein signature 106 118 1.6E-18 T 11-10-2018 IPR006015 Universal stress protein A IX88_12870 115f25391cc6ba16a4c9dbf72afeee98 147 PRINTS PR01438 Universal stress protein signature 3 21 1.6E-18 T 11-10-2018 IPR006015 Universal stress protein A IX88_12870 115f25391cc6ba16a4c9dbf72afeee98 147 PRINTS PR01438 Universal stress protein signature 124 146 1.6E-18 T 11-10-2018 IPR006015 Universal stress protein A IX88_13605 304b9ae700393ab6351cb43310d49daf 323 Pfam PF00487 Fatty acid desaturase 56 278 3.8E-18 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 IX88_13605 304b9ae700393ab6351cb43310d49daf 323 PRINTS PR00075 Fatty acid desaturase family 1 signature 211 232 1.4E-27 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 IX88_13605 304b9ae700393ab6351cb43310d49daf 323 PRINTS PR00075 Fatty acid desaturase family 1 signature 116 145 1.4E-27 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 IX88_13605 304b9ae700393ab6351cb43310d49daf 323 PRINTS PR00075 Fatty acid desaturase family 1 signature 79 99 1.4E-27 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 IX88_13605 304b9ae700393ab6351cb43310d49daf 323 PRINTS PR00075 Fatty acid desaturase family 1 signature 254 268 1.4E-27 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 IX88_13605 304b9ae700393ab6351cb43310d49daf 323 PRINTS PR00075 Fatty acid desaturase family 1 signature 34 54 1.4E-27 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 IX88_18255 e8da0edf6d38d02a2d89de60b2a1667b 335 Gene3D G3DSA:1.10.150.20 243 327 2.4E-37 T 11-10-2018 IX88_18255 e8da0edf6d38d02a2d89de60b2a1667b 335 Gene3D G3DSA:3.30.1360.10 17 225 2.8E-79 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_18255 e8da0edf6d38d02a2d89de60b2a1667b 335 SUPERFAMILY SSF55257 6 231 3.73E-31 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_18255 e8da0edf6d38d02a2d89de60b2a1667b 335 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 315 34.622 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_18255 e8da0edf6d38d02a2d89de60b2a1667b 335 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 154 2.9E-20 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_18255 e8da0edf6d38d02a2d89de60b2a1667b 335 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 225 1.6E-23 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_18255 e8da0edf6d38d02a2d89de60b2a1667b 335 SUPERFAMILY SSF47789 249 322 6.54E-26 T 11-10-2018 IX88_18255 e8da0edf6d38d02a2d89de60b2a1667b 335 Gene3D G3DSA:2.170.120.12 53 175 2.8E-79 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_18255 e8da0edf6d38d02a2d89de60b2a1667b 335 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 306 4.8E-24 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_18255 e8da0edf6d38d02a2d89de60b2a1667b 335 SUPERFAMILY SSF56553 53 176 9.68E-36 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_18255 e8da0edf6d38d02a2d89de60b2a1667b 335 SMART SM00662 23 232 9.2E-86 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_18255 e8da0edf6d38d02a2d89de60b2a1667b 335 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 7.0E-35 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_18255 e8da0edf6d38d02a2d89de60b2a1667b 335 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 314 3.8E-105 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_00040 e8da0edf6d38d02a2d89de60b2a1667b 335 Gene3D G3DSA:1.10.150.20 243 327 2.4E-37 T 11-10-2018 IX88_00040 e8da0edf6d38d02a2d89de60b2a1667b 335 Gene3D G3DSA:3.30.1360.10 17 225 2.8E-79 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_00040 e8da0edf6d38d02a2d89de60b2a1667b 335 SUPERFAMILY SSF55257 6 231 3.73E-31 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_00040 e8da0edf6d38d02a2d89de60b2a1667b 335 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 315 34.622 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_00040 e8da0edf6d38d02a2d89de60b2a1667b 335 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 154 2.9E-20 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_00040 e8da0edf6d38d02a2d89de60b2a1667b 335 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 225 1.6E-23 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_00040 e8da0edf6d38d02a2d89de60b2a1667b 335 SUPERFAMILY SSF47789 249 322 6.54E-26 T 11-10-2018 IX88_00040 e8da0edf6d38d02a2d89de60b2a1667b 335 Gene3D G3DSA:2.170.120.12 53 175 2.8E-79 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_00040 e8da0edf6d38d02a2d89de60b2a1667b 335 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 306 4.8E-24 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_00040 e8da0edf6d38d02a2d89de60b2a1667b 335 SUPERFAMILY SSF56553 53 176 9.68E-36 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_00040 e8da0edf6d38d02a2d89de60b2a1667b 335 SMART SM00662 23 232 9.2E-86 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_00040 e8da0edf6d38d02a2d89de60b2a1667b 335 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 7.0E-35 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_00040 e8da0edf6d38d02a2d89de60b2a1667b 335 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 314 3.8E-105 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 IX88_06705 8aaceeb8d1e12bfbbc56f07b7fa5a267 419 SUPERFAMILY SSF53448 40 324 7.03E-61 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_06705 8aaceeb8d1e12bfbbc56f07b7fa5a267 419 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 12 416 5.0E-182 T 11-10-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0043708 IX88_06705 8aaceeb8d1e12bfbbc56f07b7fa5a267 419 Gene3D G3DSA:3.90.550.10 31 265 3.3E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_06705 8aaceeb8d1e12bfbbc56f07b7fa5a267 419 Pfam PF13641 Glycosyltransferase like family 2 53 277 8.2E-38 T 11-10-2018 IX88_04715 9e6c100da6aa66328450c2fb50cb7ccc 400 SUPERFAMILY SSF53067 149 386 3.52E-78 T 11-10-2018 IX88_04715 9e6c100da6aa66328450c2fb50cb7ccc 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 IX88_04715 9e6c100da6aa66328450c2fb50cb7ccc 400 TIGRFAM TIGR00016 ackA: acetate kinase 4 386 8.1E-130 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 IX88_04715 9e6c100da6aa66328450c2fb50cb7ccc 400 Pfam PF00871 Acetokinase family 5 381 3.5E-127 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 IX88_04715 9e6c100da6aa66328450c2fb50cb7ccc 400 PIRSF PIRSF000722 1 391 1.7E-128 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 IX88_04715 9e6c100da6aa66328450c2fb50cb7ccc 400 Hamap MF_00020 Acetate kinase [ackA]. 1 390 158.429 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 IX88_04715 9e6c100da6aa66328450c2fb50cb7ccc 400 Gene3D G3DSA:3.30.420.40 189 398 1.6E-69 T 11-10-2018 IX88_04715 9e6c100da6aa66328450c2fb50cb7ccc 400 SUPERFAMILY SSF53067 4 187 2.36E-58 T 11-10-2018 IX88_04715 9e6c100da6aa66328450c2fb50cb7ccc 400 Gene3D G3DSA:3.30.420.40 1 186 1.0E-60 T 11-10-2018 IX88_04715 9e6c100da6aa66328450c2fb50cb7ccc 400 PRINTS PR00471 Acetate kinase family signature 368 380 4.0E-41 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 IX88_04715 9e6c100da6aa66328450c2fb50cb7ccc 400 PRINTS PR00471 Acetate kinase family signature 313 329 4.0E-41 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 IX88_04715 9e6c100da6aa66328450c2fb50cb7ccc 400 PRINTS PR00471 Acetate kinase family signature 194 215 4.0E-41 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 IX88_04715 9e6c100da6aa66328450c2fb50cb7ccc 400 PRINTS PR00471 Acetate kinase family signature 165 178 4.0E-41 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 IX88_04715 9e6c100da6aa66328450c2fb50cb7ccc 400 PRINTS PR00471 Acetate kinase family signature 291 304 4.0E-41 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 IX88_04715 9e6c100da6aa66328450c2fb50cb7ccc 400 PRINTS PR00471 Acetate kinase family signature 5 16 4.0E-41 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 IX88_13500 4059d2a2a15fa26a4be3b1a66761ca8a 341 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_13500 4059d2a2a15fa26a4be3b1a66761ca8a 341 Pfam PF00005 ABC transporter 21 169 3.2E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_13500 4059d2a2a15fa26a4be3b1a66761ca8a 341 SMART SM00382 30 227 1.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_13500 4059d2a2a15fa26a4be3b1a66761ca8a 341 SUPERFAMILY SSF55021 250 334 1.04E-21 T 11-10-2018 IX88_13500 4059d2a2a15fa26a4be3b1a66761ca8a 341 Gene3D G3DSA:3.30.70.260 233 338 1.3E-29 T 11-10-2018 IX88_13500 4059d2a2a15fa26a4be3b1a66761ca8a 341 SUPERFAMILY SSF52540 1 240 1.77E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_13500 4059d2a2a15fa26a4be3b1a66761ca8a 341 Gene3D G3DSA:3.40.50.300 1 232 5.7E-75 T 11-10-2018 IX88_13500 4059d2a2a15fa26a4be3b1a66761ca8a 341 Pfam PF09383 NIL domain 266 334 4.0E-20 T 11-10-2018 IPR018449 NIL domain IX88_13500 4059d2a2a15fa26a4be3b1a66761ca8a 341 SMART SM00930 262 337 9.9E-21 T 11-10-2018 IPR018449 NIL domain IX88_02915 83010dca46a6a2df66843e338a8142b5 102 SUPERFAMILY SSF82657 2 88 2.75E-26 T 11-10-2018 IPR036065 BolA-like superfamily IX88_02915 83010dca46a6a2df66843e338a8142b5 102 PIRSF PIRSF003113 1 98 3.3E-32 T 11-10-2018 IPR002634 BolA protein IX88_02915 83010dca46a6a2df66843e338a8142b5 102 Gene3D G3DSA:3.30.300.90 2 90 2.3E-26 T 11-10-2018 IX88_02915 83010dca46a6a2df66843e338a8142b5 102 Pfam PF01722 BolA-like protein 12 85 6.1E-25 T 11-10-2018 IPR002634 BolA protein IX88_02325 9a57311ca4111415d38313ae023fef0e 301 SUPERFAMILY SSF55486 221 296 2.94E-13 T 11-10-2018 IX88_02325 9a57311ca4111415d38313ae023fef0e 301 Pfam PF00413 Matrixin 35 294 1.1E-11 T 11-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 IX88_02325 9a57311ca4111415d38313ae023fef0e 301 PRINTS PR00138 Matrixin signature 253 278 8.2E-7 T 11-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 IX88_02325 9a57311ca4111415d38313ae023fef0e 301 PRINTS PR00138 Matrixin signature 61 76 8.2E-7 T 11-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 IX88_02325 9a57311ca4111415d38313ae023fef0e 301 SMART SM00235 159 301 0.0088 T 11-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 IX88_12840 314928fdd69137e269a8134ba116d629 390 Pfam PF03594 Benzoate membrane transport protein 6 382 4.2E-125 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 IX88_12840 314928fdd69137e269a8134ba116d629 390 TIGRFAM TIGR00843 benE: benzoate transporter 8 384 2.3E-111 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 SUPERFAMILY SSF57938 134 209 1.31E-21 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 SUPERFAMILY SSF46565 1 106 1.57E-37 T 11-10-2018 IPR036869 Chaperone J-domain superfamily IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 Pfam PF00684 DnaJ central domain 147 207 9.7E-14 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 Pfam PF01556 DnaJ C terminal domain 121 332 4.2E-41 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 PRINTS PR00625 DnaJ domain signature 42 62 7.3E-34 T 11-10-2018 IPR001623 DnaJ domain IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 PRINTS PR00625 DnaJ domain signature 62 81 7.3E-34 T 11-10-2018 IPR001623 DnaJ domain IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 PRINTS PR00625 DnaJ domain signature 7 25 7.3E-34 T 11-10-2018 IPR001623 DnaJ domain IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 PRINTS PR00625 DnaJ domain signature 25 40 7.3E-34 T 11-10-2018 IPR001623 DnaJ domain IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 11-10-2018 IPR018253 DnaJ domain, conserved site IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 1.1E-140 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 SUPERFAMILY SSF49493 258 343 5.49E-22 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 SUPERFAMILY SSF49493 113 260 8.37E-20 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 Gene3D G3DSA:2.60.260.20 117 248 3.9E-37 T 11-10-2018 IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 SMART SM00271 4 62 1.8E-35 T 11-10-2018 IPR001623 DnaJ domain IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 Gene3D G3DSA:2.10.230.10 147 207 3.9E-37 T 11-10-2018 IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 369 41.127 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 Gene3D G3DSA:1.10.287.110 1 114 5.4E-40 T 11-10-2018 IPR036869 Chaperone J-domain superfamily IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 Pfam PF00226 DnaJ domain 5 67 2.7E-30 T 11-10-2018 IPR001623 DnaJ domain IX88_02020 67973b17edd31d8a2879d7ef5178a588 370 Gene3D G3DSA:2.60.260.20 253 364 1.9E-28 T 11-10-2018 IX88_11400 845b0e5f6ec7010262df520716860f37 368 Gene3D G3DSA:3.30.390.10 28 365 1.0E-117 T 11-10-2018 IPR029017 Enolase-like, N-terminal IX88_11400 845b0e5f6ec7010262df520716860f37 368 Gene3D G3DSA:3.20.20.120 118 353 1.0E-117 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily IX88_11400 845b0e5f6ec7010262df520716860f37 368 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 191 222 - T 11-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 IX88_11400 845b0e5f6ec7010262df520716860f37 368 TIGRFAM TIGR02534 mucon_cyclo: muconate and chloromuconate cycloisomerases 3 368 2.4E-185 T 11-10-2018 IPR013370 Muconate/chloromuconate cycloisomerase GO:0018849|GO:0018850|GO:0030145 IX88_11400 845b0e5f6ec7010262df520716860f37 368 SUPERFAMILY SSF51604 113 367 2.75E-64 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily IX88_11400 845b0e5f6ec7010262df520716860f37 368 Pfam PF13378 Enolase C-terminal domain-like 148 361 7.1E-42 T 11-10-2018 IPR029065 Enolase C-terminal domain-like IX88_11400 845b0e5f6ec7010262df520716860f37 368 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 5 125 8.2E-32 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain IX88_11400 845b0e5f6ec7010262df520716860f37 368 SMART SM00922 144 241 3.3E-19 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal IX88_11400 845b0e5f6ec7010262df520716860f37 368 SUPERFAMILY SSF54826 4 126 1.36E-32 T 11-10-2018 IX88_13660 cb906a3ff05080db53631d9ed0c5378e 184 Gene3D G3DSA:1.10.357.10 6 180 2.2E-21 T 11-10-2018 IX88_13660 cb906a3ff05080db53631d9ed0c5378e 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 6.1E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_13660 cb906a3ff05080db53631d9ed0c5378e 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 6.1E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_13660 cb906a3ff05080db53631d9ed0c5378e 184 SUPERFAMILY SSF46689 12 69 2.62E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_13660 cb906a3ff05080db53631d9ed0c5378e 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 2.3E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_15460 84bbb81fdc3e3347d6b750575d0803ff 510 Gene3D G3DSA:3.90.1150.170 45 488 6.3E-128 T 11-10-2018 IX88_15460 84bbb81fdc3e3347d6b750575d0803ff 510 Gene3D G3DSA:3.40.640.10 113 372 6.3E-128 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_15460 84bbb81fdc3e3347d6b750575d0803ff 510 SUPERFAMILY SSF53383 19 496 2.02E-115 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_15460 84bbb81fdc3e3347d6b750575d0803ff 510 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 312 333 - T 11-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 IX88_15460 84bbb81fdc3e3347d6b750575d0803ff 510 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 81 428 2.4E-61 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 IX88_00380 583f4ac00ade93167d0c91a7b27cf04e 299 SUPERFAMILY SSF103481 49 150 2.22E-17 T 11-10-2018 IX88_00380 583f4ac00ade93167d0c91a7b27cf04e 299 Pfam PF00892 EamA-like transporter family 161 292 3.1E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_00380 583f4ac00ade93167d0c91a7b27cf04e 299 Pfam PF00892 EamA-like transporter family 17 147 2.1E-27 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_00380 583f4ac00ade93167d0c91a7b27cf04e 299 SUPERFAMILY SSF103481 195 296 2.09E-15 T 11-10-2018 IX88_08960 c691e109c5efc670b3cea1ddccd0583a 243 Gene3D G3DSA:3.40.50.300 3 242 1.7E-77 T 11-10-2018 IX88_08960 c691e109c5efc670b3cea1ddccd0583a 243 Pfam PF00005 ABC transporter 19 167 5.9E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_08960 c691e109c5efc670b3cea1ddccd0583a 243 SUPERFAMILY SSF52540 3 237 4.02E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_08960 c691e109c5efc670b3cea1ddccd0583a 243 SMART SM00382 28 215 2.6E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_08960 c691e109c5efc670b3cea1ddccd0583a 243 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_08960 c691e109c5efc670b3cea1ddccd0583a 243 PIRSF PIRSF039085 1 242 1.4E-102 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 IX88_08810 ed8d01ffb263b2ae50bf26d5bd2ccded 533 SUPERFAMILY SSF52096 237 515 3.46E-86 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_08810 ed8d01ffb263b2ae50bf26d5bd2ccded 533 Gene3D G3DSA:3.90.226.10 272 533 1.8E-102 T 11-10-2018 IX88_08810 ed8d01ffb263b2ae50bf26d5bd2ccded 533 SUPERFAMILY SSF52096 22 270 1.24E-71 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_08810 ed8d01ffb263b2ae50bf26d5bd2ccded 533 Pfam PF01039 Carboxyl transferase domain 48 524 1.9E-152 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 IX88_08810 ed8d01ffb263b2ae50bf26d5bd2ccded 533 Gene3D G3DSA:3.90.226.10 1 271 5.3E-98 T 11-10-2018 IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 Gene3D G3DSA:3.30.70.3380 377 487 2.0E-38 T 11-10-2018 IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 SUPERFAMILY SSF54980 301 379 9.71E-18 T 11-10-2018 IPR035647 EF-G domain III/V-like IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 SUPERFAMILY SSF54980 408 502 1.1E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 SMART SM00838 407 492 0.0023 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 PRINTS PR00315 GTP-binding elongation factor signature 135 144 1.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 PRINTS PR00315 GTP-binding elongation factor signature 15 28 1.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 PRINTS PR00315 GTP-binding elongation factor signature 99 110 1.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 PRINTS PR00315 GTP-binding elongation factor signature 83 93 1.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 Pfam PF00679 Elongation factor G C-terminus 408 493 4.6E-21 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 Pfam PF00009 Elongation factor Tu GTP binding domain 11 190 2.3E-51 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 TIGRFAM TIGR01393 lepA: elongation factor 4 11 604 1.1E-287 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 Gene3D G3DSA:3.30.70.2570 488 562 1.4E-32 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 Pfam PF06421 GTP-binding protein LepA C-terminus 496 602 8.0E-50 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 Gene3D G3DSA:3.30.70.870 295 376 4.0E-34 T 11-10-2018 IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 Gene3D G3DSA:3.40.50.300 8 194 2.2E-68 T 11-10-2018 IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 Pfam PF03144 Elongation factor Tu domain 2 214 284 1.2E-10 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 Gene3D G3DSA:2.40.30.10 195 293 4.0E-32 T 11-10-2018 IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 180 8.1E-18 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 Hamap MF_00071 Elongation factor 4 [lepA]. 1 605 291.116 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 IX88_15815 b3664ca1a3ed997e347d28ef6d05ff86 605 SUPERFAMILY SSF52540 6 237 9.5E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_15190 ce3c3abb0baab5d12f3505816fd0eea5 383 SUPERFAMILY SSF53383 35 370 1.1E-73 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_15190 ce3c3abb0baab5d12f3505816fd0eea5 383 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 111 309 1.9E-24 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 IX88_15190 ce3c3abb0baab5d12f3505816fd0eea5 383 Hamap MF_00609 Histidine decarboxylase [hdc]. 2 374 67.482 T 11-10-2018 IPR023523 Histidine decarboxylase, bacteria GO:0004398|GO:0030170 KEGG: 00340+4.1.1.22|MetaCyc: PWY-6173 IX88_15190 ce3c3abb0baab5d12f3505816fd0eea5 383 Gene3D G3DSA:3.40.640.10 45 311 1.9E-53 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_15190 ce3c3abb0baab5d12f3505816fd0eea5 383 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 226 247 - T 11-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 IX88_11440 bb4156bf7be06ced34a3201069af4f38 495 Pfam PF00171 Aldehyde dehydrogenase family 33 491 7.2E-154 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_11440 bb4156bf7be06ced34a3201069af4f38 495 Gene3D G3DSA:3.40.605.10 34 489 1.9E-164 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_11440 bb4156bf7be06ced34a3201069af4f38 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 268 275 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 IX88_11440 bb4156bf7be06ced34a3201069af4f38 495 Gene3D G3DSA:3.40.309.10 272 460 1.9E-164 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_11440 bb4156bf7be06ced34a3201069af4f38 495 SUPERFAMILY SSF53720 8 494 8.25E-151 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_12450 17dc21f056228723dc61ab8b9cdef48d 132 Pfam PF13554 Bacteriophage related domain of unknown function 10 97 6.7E-8 T 11-10-2018 IPR025395 Protein of unknown function DUF4128 IX88_06295 f692ab2433fd0ffdbd7a3a4b6465ab6f 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site IX88_06295 f692ab2433fd0ffdbd7a3a4b6465ab6f 409 SUPERFAMILY SSF53901 213 407 1.48E-62 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_06295 f692ab2433fd0ffdbd7a3a4b6465ab6f 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 364 2.4E-31 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal IX88_06295 f692ab2433fd0ffdbd7a3a4b6465ab6f 409 Gene3D G3DSA:3.40.47.10 258 408 1.5E-44 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_06295 f692ab2433fd0ffdbd7a3a4b6465ab6f 409 SUPERFAMILY SSF53901 2 251 5.12E-58 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_06295 f692ab2433fd0ffdbd7a3a4b6465ab6f 409 SMART SM00825 Beta-ketoacyl synthase 4 409 2.3E-13 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain IX88_06295 f692ab2433fd0ffdbd7a3a4b6465ab6f 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 2.6E-39 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal IX88_06295 f692ab2433fd0ffdbd7a3a4b6465ab6f 409 Gene3D G3DSA:3.40.47.10 1 252 5.1E-59 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_04305 ebb2dce1ddeec1a198acbf3a2ed849fa 310 SUPERFAMILY SSF55174 21 72 8.51E-10 T 11-10-2018 IX88_04305 ebb2dce1ddeec1a198acbf3a2ed849fa 310 Pfam PF01479 S4 domain 22 68 2.7E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_04305 ebb2dce1ddeec1a198acbf3a2ed849fa 310 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 18 307 2.0E-80 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_04305 ebb2dce1ddeec1a198acbf3a2ed849fa 310 Gene3D G3DSA:3.30.2350.10 95 310 3.1E-68 T 11-10-2018 IX88_04305 ebb2dce1ddeec1a198acbf3a2ed849fa 310 Pfam PF00849 RNA pseudouridylate synthase 104 248 4.3E-30 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_04305 ebb2dce1ddeec1a198acbf3a2ed849fa 310 SUPERFAMILY SSF55120 96 307 3.04E-59 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_04305 ebb2dce1ddeec1a198acbf3a2ed849fa 310 Gene3D G3DSA:3.10.290.10 10 77 3.8E-19 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 IX88_04305 ebb2dce1ddeec1a198acbf3a2ed849fa 310 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_04305 ebb2dce1ddeec1a198acbf3a2ed849fa 310 SMART SM00363 22 77 1.5E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_15930 a7d5bfce89e9aa60a9832450ebb19f68 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 264 6.3E-44 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 IX88_15930 a7d5bfce89e9aa60a9832450ebb19f68 266 SUPERFAMILY SSF52096 9 264 2.21E-67 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_15930 a7d5bfce89e9aa60a9832450ebb19f68 266 Gene3D G3DSA:1.10.12.10 210 255 4.0E-32 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal IX88_15930 a7d5bfce89e9aa60a9832450ebb19f68 266 Gene3D G3DSA:3.90.226.10 10 192 5.0E-64 T 11-10-2018 IX88_07355 9257e79f16aa4c5c258d25cd2e679a39 704 Gene3D G3DSA:2.40.170.20 172 704 1.1E-129 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IX88_07355 9257e79f16aa4c5c258d25cd2e679a39 704 Gene3D G3DSA:2.170.130.10 43 171 5.6E-33 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_07355 9257e79f16aa4c5c258d25cd2e679a39 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 161 1.2E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_07355 9257e79f16aa4c5c258d25cd2e679a39 704 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 64 702 3.4E-104 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 IX88_07355 9257e79f16aa4c5c258d25cd2e679a39 704 Pfam PF00593 TonB dependent receptor 255 703 6.1E-65 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_07355 9257e79f16aa4c5c258d25cd2e679a39 704 SUPERFAMILY SSF56935 29 704 7.33E-138 T 11-10-2018 IX88_04310 32544292fd6d42b95d70fc28385ea93c 224 Gene3D G3DSA:3.40.50.1000 8 204 1.7E-49 T 11-10-2018 IPR023214 HAD superfamily IX88_04310 32544292fd6d42b95d70fc28385ea93c 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 2.7E-34 T 11-10-2018 IX88_04310 32544292fd6d42b95d70fc28385ea93c 224 Gene3D G3DSA:1.10.150.240 20 83 1.7E-49 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IX88_04310 32544292fd6d42b95d70fc28385ea93c 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 76 177 3.6E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IX88_04310 32544292fd6d42b95d70fc28385ea93c 224 SUPERFAMILY SSF56784 4 215 6.3E-56 T 11-10-2018 IPR036412 HAD-like superfamily IX88_08315 308a02d0652515f94cfb594ebe784c7f 325 Gene3D G3DSA:3.40.50.10490 5 195 5.0E-59 T 11-10-2018 IX88_08315 308a02d0652515f94cfb594ebe784c7f 325 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 314 3.0E-106 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 IX88_08315 308a02d0652515f94cfb594ebe784c7f 325 Pfam PF01380 SIS domain 41 172 4.7E-27 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 IX88_08315 308a02d0652515f94cfb594ebe784c7f 325 Gene3D G3DSA:3.10.580.10 196 322 5.2E-45 T 11-10-2018 IX88_08315 308a02d0652515f94cfb594ebe784c7f 325 SMART SM00116 276 324 2.9E-5 T 11-10-2018 IPR000644 CBS domain IX88_08315 308a02d0652515f94cfb594ebe784c7f 325 SMART SM00116 210 258 0.036 T 11-10-2018 IPR000644 CBS domain IX88_08315 308a02d0652515f94cfb594ebe784c7f 325 PIRSF PIRSF004692 1 325 1.8E-134 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 IX88_08315 308a02d0652515f94cfb594ebe784c7f 325 Pfam PF00571 CBS domain 269 322 1.4E-11 T 11-10-2018 IPR000644 CBS domain IX88_08315 308a02d0652515f94cfb594ebe784c7f 325 Pfam PF00571 CBS domain 201 258 3.3E-6 T 11-10-2018 IPR000644 CBS domain IX88_08315 308a02d0652515f94cfb594ebe784c7f 325 SUPERFAMILY SSF53697 14 322 8.23E-66 T 11-10-2018 IX88_00745 9360992e4630bcde8118fe9d50c74e9a 268 SUPERFAMILY SSF53335 2 255 5.47E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_00745 9360992e4630bcde8118fe9d50c74e9a 268 Gene3D G3DSA:3.40.50.150 1 264 3.2E-74 T 11-10-2018 IX88_00745 9360992e4630bcde8118fe9d50c74e9a 268 Pfam PF08241 Methyltransferase domain 84 168 1.9E-12 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 IX88_00745 9360992e4630bcde8118fe9d50c74e9a 268 PIRSF PIRSF018249 1 263 6.1E-89 T 11-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 IX88_13560 4e7fc7adf2f92cfe4495d1f8a9542642 190 Gene3D G3DSA:3.10.450.50 48 174 1.2E-9 T 11-10-2018 IX88_13560 4e7fc7adf2f92cfe4495d1f8a9542642 190 SUPERFAMILY SSF54427 46 164 5.98E-13 T 11-10-2018 IPR032710 NTF2-like domain superfamily IX88_11225 087216375858ead2c4245250ad898c52 243 SMART SM00345 18 77 5.3E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_11225 087216375858ead2c4245250ad898c52 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 2.2E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_11225 087216375858ead2c4245250ad898c52 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 2.2E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_11225 087216375858ead2c4245250ad898c52 243 Pfam PF07702 UTRA domain 102 236 1.2E-16 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 IX88_11225 087216375858ead2c4245250ad898c52 243 Gene3D G3DSA:1.10.10.10 9 77 2.3E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_11225 087216375858ead2c4245250ad898c52 243 SUPERFAMILY SSF64288 65 242 2.98E-25 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IX88_11225 087216375858ead2c4245250ad898c52 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 4.5E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_11225 087216375858ead2c4245250ad898c52 243 SUPERFAMILY SSF46785 11 90 1.61E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_11225 087216375858ead2c4245250ad898c52 243 Gene3D G3DSA:3.40.1410.10 86 241 1.5E-21 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IX88_11225 087216375858ead2c4245250ad898c52 243 SMART SM00866 97 237 3.9E-14 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 IX88_01970 926cfdaa7020ce199c55998fa7f4cd19 186 SUPERFAMILY SSF48150 4 184 7.85E-74 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 IX88_01970 926cfdaa7020ce199c55998fa7f4cd19 186 Pfam PF03352 Methyladenine glycosylase 8 183 7.8E-70 T 11-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 IX88_01970 926cfdaa7020ce199c55998fa7f4cd19 186 Gene3D G3DSA:1.10.340.30 3 186 1.1E-74 T 11-10-2018 IX88_04145 fff17ac18fe349ac09584af05a09e602 193 SUPERFAMILY SSF54523 87 191 1.05E-25 T 11-10-2018 IX88_04145 fff17ac18fe349ac09584af05a09e602 193 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 59 80 9.8E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_04145 fff17ac18fe349ac09584af05a09e602 193 Gene3D G3DSA:3.30.700.10 83 191 1.7E-30 T 11-10-2018 IX88_04145 fff17ac18fe349ac09584af05a09e602 193 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 59 190 2.2E-45 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 IX88_04145 fff17ac18fe349ac09584af05a09e602 193 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 59 79 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_04145 fff17ac18fe349ac09584af05a09e602 193 PRINTS PR00813 Bacterial general secretion pathway protein G signature 96 114 1.1E-16 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 IX88_04145 fff17ac18fe349ac09584af05a09e602 193 PRINTS PR00813 Bacterial general secretion pathway protein G signature 60 85 1.1E-16 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 IX88_04145 fff17ac18fe349ac09584af05a09e602 193 Pfam PF08334 Type II secretion system (T2SS), protein G 83 190 6.2E-34 T 11-10-2018 IPR013545 Type II secretion system protein G IX88_04145 fff17ac18fe349ac09584af05a09e602 193 Pfam PF07963 Prokaryotic N-terminal methylation motif 55 80 4.9E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_11275 8dc090ad228265e8b277d18d76cae034 448 Gene3D G3DSA:3.30.70.360 223 338 6.1E-124 T 11-10-2018 IX88_11275 8dc090ad228265e8b277d18d76cae034 448 SUPERFAMILY SSF55031 226 333 1.7E-27 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain IX88_11275 8dc090ad228265e8b277d18d76cae034 448 Gene3D G3DSA:3.40.630.10 37 418 6.1E-124 T 11-10-2018 IX88_11275 8dc090ad228265e8b277d18d76cae034 448 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 37 421 5.0E-92 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 IX88_11275 8dc090ad228265e8b277d18d76cae034 448 Pfam PF01546 Peptidase family M20/M25/M40 94 429 4.2E-26 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 IX88_11275 8dc090ad228265e8b277d18d76cae034 448 Pfam PF07687 Peptidase dimerisation domain 227 323 3.8E-12 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain IX88_11275 8dc090ad228265e8b277d18d76cae034 448 PIRSF PIRSF005962 22 436 5.8E-114 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 IX88_11275 8dc090ad228265e8b277d18d76cae034 448 SUPERFAMILY SSF53187 24 432 1.98E-73 T 11-10-2018 IX88_01765 69feacbcb54c8518d4fe03ac55ed10ab 305 SUPERFAMILY SSF55326 2 136 1.57E-40 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily IX88_01765 69feacbcb54c8518d4fe03ac55ed10ab 305 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 304 29.471 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 IX88_01765 69feacbcb54c8518d4fe03ac55ed10ab 305 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 304 7.4E-108 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 IX88_01765 69feacbcb54c8518d4fe03ac55ed10ab 305 Gene3D G3DSA:3.30.1330.10 1 141 1.7E-50 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily IX88_01765 69feacbcb54c8518d4fe03ac55ed10ab 305 Gene3D G3DSA:3.90.650.10 142 305 5.5E-49 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily IX88_01765 69feacbcb54c8518d4fe03ac55ed10ab 305 SUPERFAMILY SSF56042 140 286 3.29E-34 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily IX88_01765 69feacbcb54c8518d4fe03ac55ed10ab 305 Pfam PF02769 AIR synthase related protein, C-terminal domain 185 286 1.8E-5 T 11-10-2018 IPR010918 PurM-like, C-terminal domain IX88_01765 69feacbcb54c8518d4fe03ac55ed10ab 305 PIRSF PIRSF005303 1 304 1.2E-96 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 IX88_01765 69feacbcb54c8518d4fe03ac55ed10ab 305 Pfam PF00586 AIR synthase related protein, N-terminal domain 25 135 7.1E-28 T 11-10-2018 IPR016188 PurM-like, N-terminal domain IX88_15130 c104d74aaa10706cb1bd7893f3b48956 383 Gene3D G3DSA:3.40.710.10 23 383 1.7E-148 T 11-10-2018 IX88_15130 c104d74aaa10706cb1bd7893f3b48956 383 ProSitePatterns PS00336 Beta-lactamase class-C active site. 84 91 - T 11-10-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 IX88_15130 c104d74aaa10706cb1bd7893f3b48956 383 Pfam PF00144 Beta-lactamase 36 380 2.8E-66 T 11-10-2018 IPR001466 Beta-lactamase-related IX88_15130 c104d74aaa10706cb1bd7893f3b48956 383 SUPERFAMILY SSF56601 29 381 1.93E-88 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like IX88_08805 d89950e068f57e3a01e25eebe09dee34 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 IX88_08805 d89950e068f57e3a01e25eebe09dee34 267 Gene3D G3DSA:1.10.12.10 204 267 3.1E-22 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal IX88_08805 d89950e068f57e3a01e25eebe09dee34 267 SUPERFAMILY SSF52096 1 259 1.71E-77 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_08805 d89950e068f57e3a01e25eebe09dee34 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 260 4.5E-54 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 IX88_08805 d89950e068f57e3a01e25eebe09dee34 267 Gene3D G3DSA:3.90.226.10 1 201 2.9E-66 T 11-10-2018 IX88_15100 6c69fa174ddf68ccb59db4904a347998 268 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 7 263 35.509 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 IX88_15100 6c69fa174ddf68ccb59db4904a347998 268 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 IX88_15100 6c69fa174ddf68ccb59db4904a347998 268 SUPERFAMILY SSF51366 16 263 1.29E-86 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 IX88_15100 6c69fa174ddf68ccb59db4904a347998 268 Pfam PF00218 Indole-3-glycerol phosphate synthase 9 261 2.4E-99 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 IX88_15100 6c69fa174ddf68ccb59db4904a347998 268 Gene3D G3DSA:3.20.20.70 2 267 4.3E-98 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_03070 754b2ac80b8a8892fca39420b5acc2a7 464 SUPERFAMILY SSF52540 75 352 8.75E-91 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_03070 754b2ac80b8a8892fca39420b5acc2a7 464 SMART SM00382 140 331 3.2E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_03070 754b2ac80b8a8892fca39420b5acc2a7 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IX88_03070 754b2ac80b8a8892fca39420b5acc2a7 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 346 1.5E-62 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IX88_03070 754b2ac80b8a8892fca39420b5acc2a7 464 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 5.6E-20 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IX88_03070 754b2ac80b8a8892fca39420b5acc2a7 464 SUPERFAMILY SSF47917 349 463 3.4E-53 T 11-10-2018 IX88_03070 754b2ac80b8a8892fca39420b5acc2a7 464 SUPERFAMILY SSF50615 2 73 8.11E-25 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IX88_03070 754b2ac80b8a8892fca39420b5acc2a7 464 Gene3D G3DSA:3.40.50.300 74 348 1.8E-112 T 11-10-2018 IX88_03070 754b2ac80b8a8892fca39420b5acc2a7 464 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 3.1E-253 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 IX88_03070 754b2ac80b8a8892fca39420b5acc2a7 464 Gene3D G3DSA:2.40.10.170 1 73 7.2E-30 T 11-10-2018 IX88_03070 754b2ac80b8a8892fca39420b5acc2a7 464 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.828 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 IX88_03070 754b2ac80b8a8892fca39420b5acc2a7 464 Gene3D G3DSA:1.10.1140.10 349 464 9.5E-58 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 IX88_05455 fb711989829750068c6fa0e4c49d5b5a 263 SUPERFAMILY SSF53335 34 262 8.65E-53 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_05455 fb711989829750068c6fa0e4c49d5b5a 263 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 1 263 25.976 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 IX88_05455 fb711989829750068c6fa0e4c49d5b5a 263 Gene3D G3DSA:3.40.50.150 67 263 5.2E-61 T 11-10-2018 IX88_05455 fb711989829750068c6fa0e4c49d5b5a 263 Pfam PF04445 Putative SAM-dependent methyltransferase 73 262 7.1E-50 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 IX88_00385 d2038f05023a2dff5d7854e55a421a9a 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.7E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_00385 d2038f05023a2dff5d7854e55a421a9a 288 SUPERFAMILY SSF53850 87 286 1.72E-31 T 11-10-2018 IX88_00385 d2038f05023a2dff5d7854e55a421a9a 288 Gene3D G3DSA:3.40.190.10 84 174 1.1E-18 T 11-10-2018 IX88_00385 d2038f05023a2dff5d7854e55a421a9a 288 Pfam PF03466 LysR substrate binding domain 87 285 4.8E-32 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_00385 d2038f05023a2dff5d7854e55a421a9a 288 SUPERFAMILY SSF46785 1 110 5.44E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_00385 d2038f05023a2dff5d7854e55a421a9a 288 Gene3D G3DSA:3.40.190.10 175 252 9.4E-9 T 11-10-2018 IX88_00385 d2038f05023a2dff5d7854e55a421a9a 288 Gene3D G3DSA:1.10.10.10 1 83 5.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_04115 9cb144ea607c8ef31dab4b201ccffbd2 318 SUPERFAMILY SSF49493 131 217 5.76E-14 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 IX88_04115 9cb144ea607c8ef31dab4b201ccffbd2 318 SMART SM00271 3 60 6.2E-27 T 11-10-2018 IPR001623 DnaJ domain IX88_04115 9cb144ea607c8ef31dab4b201ccffbd2 318 SUPERFAMILY SSF49493 221 302 3.4E-15 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 IX88_04115 9cb144ea607c8ef31dab4b201ccffbd2 318 Gene3D G3DSA:2.60.260.20 132 213 7.0E-20 T 11-10-2018 IX88_04115 9cb144ea607c8ef31dab4b201ccffbd2 318 Gene3D G3DSA:2.60.260.20 216 316 4.8E-19 T 11-10-2018 IX88_04115 9cb144ea607c8ef31dab4b201ccffbd2 318 PRINTS PR00625 DnaJ domain signature 60 79 3.0E-20 T 11-10-2018 IPR001623 DnaJ domain IX88_04115 9cb144ea607c8ef31dab4b201ccffbd2 318 PRINTS PR00625 DnaJ domain signature 6 24 3.0E-20 T 11-10-2018 IPR001623 DnaJ domain IX88_04115 9cb144ea607c8ef31dab4b201ccffbd2 318 PRINTS PR00625 DnaJ domain signature 24 39 3.0E-20 T 11-10-2018 IPR001623 DnaJ domain IX88_04115 9cb144ea607c8ef31dab4b201ccffbd2 318 PRINTS PR00625 DnaJ domain signature 40 60 3.0E-20 T 11-10-2018 IPR001623 DnaJ domain IX88_04115 9cb144ea607c8ef31dab4b201ccffbd2 318 SUPERFAMILY SSF46565 3 98 1.06E-28 T 11-10-2018 IPR036869 Chaperone J-domain superfamily IX88_04115 9cb144ea607c8ef31dab4b201ccffbd2 318 Gene3D G3DSA:1.10.287.110 1 129 2.8E-30 T 11-10-2018 IPR036869 Chaperone J-domain superfamily IX88_04115 9cb144ea607c8ef31dab4b201ccffbd2 318 Pfam PF00226 DnaJ domain 4 65 1.5E-22 T 11-10-2018 IPR001623 DnaJ domain IX88_04115 9cb144ea607c8ef31dab4b201ccffbd2 318 Pfam PF01556 DnaJ C terminal domain 139 291 2.3E-31 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal IX88_02690 990d5a964ee5443dd64b3a95fddc7b94 294 Pfam PF13714 Phosphoenolpyruvate phosphomutase 15 253 9.2E-48 T 11-10-2018 IX88_02690 990d5a964ee5443dd64b3a95fddc7b94 294 Gene3D G3DSA:3.20.20.60 3 294 1.0E-101 T 11-10-2018 IX88_02690 990d5a964ee5443dd64b3a95fddc7b94 294 SUPERFAMILY SSF51621 5 288 1.21E-95 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 IX88_02690 990d5a964ee5443dd64b3a95fddc7b94 294 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 4 292 49.038 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 IX88_02690 990d5a964ee5443dd64b3a95fddc7b94 294 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 IX88_02690 990d5a964ee5443dd64b3a95fddc7b94 294 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 7 290 3.2E-128 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 IX88_01305 c92a8c18e004aa6fcb0355e9ee92dd13 245 Pfam PF03358 NADPH-dependent FMN reductase 11 155 1.8E-31 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 IX88_01305 c92a8c18e004aa6fcb0355e9ee92dd13 245 SUPERFAMILY SSF52218 7 181 5.74E-32 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_01305 c92a8c18e004aa6fcb0355e9ee92dd13 245 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 11 183 1.2E-71 T 11-10-2018 IPR019912 FMN reductase, MsuE-like IX88_01305 c92a8c18e004aa6fcb0355e9ee92dd13 245 Gene3D G3DSA:3.40.50.360 4 183 1.2E-41 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_13175 89ba07837a92031771cbb038fa3fb5b0 327 Gene3D G3DSA:1.10.287.70 27 249 1.9E-57 T 11-10-2018 IX88_13175 89ba07837a92031771cbb038fa3fb5b0 327 SUPERFAMILY SSF81324 27 246 3.78E-47 T 11-10-2018 IX88_13175 89ba07837a92031771cbb038fa3fb5b0 327 Pfam PF00520 Ion transport protein 28 246 4.4E-29 T 11-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 IX88_13175 89ba07837a92031771cbb038fa3fb5b0 327 PRINTS PR00169 Potassium channel signature 159 182 9.2E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 IX88_13175 89ba07837a92031771cbb038fa3fb5b0 327 PRINTS PR00169 Potassium channel signature 21 49 9.2E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 IX88_13175 89ba07837a92031771cbb038fa3fb5b0 327 PRINTS PR00169 Potassium channel signature 63 86 9.2E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 IX88_13175 89ba07837a92031771cbb038fa3fb5b0 327 PRINTS PR00169 Potassium channel signature 219 245 9.2E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 IX88_13175 89ba07837a92031771cbb038fa3fb5b0 327 PRINTS PR00169 Potassium channel signature 130 156 9.2E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 IX88_13175 89ba07837a92031771cbb038fa3fb5b0 327 PRINTS PR00169 Potassium channel signature 190 212 9.2E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 IX88_10965 0f5eed054dfc79695f9ab440baa8e9a0 341 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 49 208 4.8E-30 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal IX88_10965 0f5eed054dfc79695f9ab440baa8e9a0 341 SMART SM00342 252 334 3.8E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_10965 0f5eed054dfc79695f9ab440baa8e9a0 341 Gene3D G3DSA:1.10.10.60 232 340 2.8E-23 T 11-10-2018 IX88_10965 0f5eed054dfc79695f9ab440baa8e9a0 341 SUPERFAMILY SSF46689 287 337 4.93E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_10965 0f5eed054dfc79695f9ab440baa8e9a0 341 Pfam PF12833 Helix-turn-helix domain 258 335 2.3E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_14575 6fa1fe5076da70aeb6d8c5749fedb7dd 205 Gene3D G3DSA:2.40.40.10 107 201 2.3E-40 T 11-10-2018 IPR036908 RlpA-like domain superfamily IX88_14575 6fa1fe5076da70aeb6d8c5749fedb7dd 205 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 110 200 1.1E-42 T 11-10-2018 IPR012997 Rare lipoprotein A IX88_14575 6fa1fe5076da70aeb6d8c5749fedb7dd 205 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 16 200 24.95 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 IX88_14575 6fa1fe5076da70aeb6d8c5749fedb7dd 205 Pfam PF03330 Lytic transglycolase 108 196 1.5E-27 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain IX88_14575 6fa1fe5076da70aeb6d8c5749fedb7dd 205 SUPERFAMILY SSF50685 108 201 6.98E-15 T 11-10-2018 IPR036908 RlpA-like domain superfamily IX88_06020 92f0de4f55b78d81ab964fac0cc2a59f 426 Gene3D G3DSA:3.40.640.10 58 328 1.7E-167 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_06020 92f0de4f55b78d81ab964fac0cc2a59f 426 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 422 48.947 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 IX88_06020 92f0de4f55b78d81ab964fac0cc2a59f 426 SUPERFAMILY SSF53383 5 421 1.75E-132 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_06020 92f0de4f55b78d81ab964fac0cc2a59f 426 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 419 5.0E-184 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 IX88_06020 92f0de4f55b78d81ab964fac0cc2a59f 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 240 277 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_06020 92f0de4f55b78d81ab964fac0cc2a59f 426 PIRSF PIRSF000521 23 422 1.3E-30 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_06020 92f0de4f55b78d81ab964fac0cc2a59f 426 Gene3D G3DSA:3.90.1150.10 8 412 1.7E-167 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_06020 92f0de4f55b78d81ab964fac0cc2a59f 426 Pfam PF00202 Aminotransferase class-III 23 418 2.6E-131 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_02540 539df62bc0cc35641c295fc3cfd33fde 722 Pfam PF04185 Phosphoesterase family 45 454 3.7E-114 T 11-10-2018 IPR007312 Phosphoesterase GO:0016788 IX88_02540 539df62bc0cc35641c295fc3cfd33fde 722 Pfam PF05506 Domain of unknown function (DUF756) 623 704 1.3E-14 T 11-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 IX88_02540 539df62bc0cc35641c295fc3cfd33fde 722 Pfam PF05506 Domain of unknown function (DUF756) 526 612 2.8E-23 T 11-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 IX88_02540 539df62bc0cc35641c295fc3cfd33fde 722 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 2 718 9.4E-284 T 11-10-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 IX88_02540 539df62bc0cc35641c295fc3cfd33fde 722 Gene3D G3DSA:3.40.720.10 299 501 9.5E-52 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 IX88_02540 539df62bc0cc35641c295fc3cfd33fde 722 Gene3D G3DSA:3.40.720.10 34 201 8.7E-30 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 IX88_02680 66130d523c009c93c9e1bfc32ac6dd58 404 SUPERFAMILY SSF53383 1 397 5.13E-120 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_02680 66130d523c009c93c9e1bfc32ac6dd58 404 Gene3D G3DSA:3.90.1150.10 11 392 1.5E-153 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_02680 66130d523c009c93c9e1bfc32ac6dd58 404 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 IX88_02680 66130d523c009c93c9e1bfc32ac6dd58 404 Gene3D G3DSA:3.40.640.10 60 301 1.5E-153 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_02680 66130d523c009c93c9e1bfc32ac6dd58 404 Pfam PF00155 Aminotransferase class I and II 27 391 3.5E-83 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 IX88_02680 66130d523c009c93c9e1bfc32ac6dd58 404 PRINTS PR00799 Aspartate aminotransferase signature 342 360 2.3E-35 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 IX88_02680 66130d523c009c93c9e1bfc32ac6dd58 404 PRINTS PR00799 Aspartate aminotransferase signature 207 219 2.3E-35 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 IX88_02680 66130d523c009c93c9e1bfc32ac6dd58 404 PRINTS PR00799 Aspartate aminotransferase signature 176 195 2.3E-35 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 IX88_02680 66130d523c009c93c9e1bfc32ac6dd58 404 PRINTS PR00799 Aspartate aminotransferase signature 274 299 2.3E-35 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 IX88_10800 f1bd5ea2b832fdd81d711f698f6b1b86 519 Gene3D G3DSA:3.30.870.10 246 478 6.7E-33 T 11-10-2018 IX88_10800 f1bd5ea2b832fdd81d711f698f6b1b86 519 SUPERFAMILY SSF56024 272 471 4.04E-26 T 11-10-2018 IX88_10800 f1bd5ea2b832fdd81d711f698f6b1b86 519 Gene3D G3DSA:3.30.870.10 55 245 8.5E-39 T 11-10-2018 IX88_10800 f1bd5ea2b832fdd81d711f698f6b1b86 519 SMART SM00155 164 191 0.006 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 IX88_10800 f1bd5ea2b832fdd81d711f698f6b1b86 519 SMART SM00155 410 436 3.7E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 IX88_10800 f1bd5ea2b832fdd81d711f698f6b1b86 519 SUPERFAMILY SSF56024 71 230 2.92E-38 T 11-10-2018 IX88_10800 f1bd5ea2b832fdd81d711f698f6b1b86 519 Pfam PF13091 PLD-like domain 314 462 9.4E-16 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 IX88_10800 f1bd5ea2b832fdd81d711f698f6b1b86 519 Pfam PF13091 PLD-like domain 75 222 9.7E-18 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 IX88_11185 94f3c4916fcd5c506fb121aec949ce1e 362 Gene3D G3DSA:1.10.287.470 130 231 1.7E-7 T 11-10-2018 IX88_11185 94f3c4916fcd5c506fb121aec949ce1e 362 Gene3D G3DSA:2.40.50.100 65 129 7.9E-15 T 11-10-2018 IX88_11185 94f3c4916fcd5c506fb121aec949ce1e 362 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 362 3.4E-6 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 IX88_11185 94f3c4916fcd5c506fb121aec949ce1e 362 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 3.4E-6 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 IX88_11185 94f3c4916fcd5c506fb121aec949ce1e 362 SUPERFAMILY SSF111369 185 302 1.57E-18 T 11-10-2018 IX88_11185 94f3c4916fcd5c506fb121aec949ce1e 362 SUPERFAMILY SSF111369 63 120 3.53E-11 T 11-10-2018 IX88_11185 94f3c4916fcd5c506fb121aec949ce1e 362 Gene3D G3DSA:2.40.30.170 247 362 2.6E-32 T 11-10-2018 IX88_11185 94f3c4916fcd5c506fb121aec949ce1e 362 Pfam PF13533 Biotin-lipoyl like 66 111 9.3E-16 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain IX88_11185 94f3c4916fcd5c506fb121aec949ce1e 362 Pfam PF13437 HlyD family secretion protein 232 349 3.8E-15 T 11-10-2018 IX88_10515 68dd26bcebbf8872f27c955efffd37b2 305 Pfam PF00892 EamA-like transporter family 3 134 6.2E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_10515 68dd26bcebbf8872f27c955efffd37b2 305 Pfam PF00892 EamA-like transporter family 150 285 1.2E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_10515 68dd26bcebbf8872f27c955efffd37b2 305 SUPERFAMILY SSF103481 189 285 4.32E-9 T 11-10-2018 IX88_10515 68dd26bcebbf8872f27c955efffd37b2 305 SUPERFAMILY SSF103481 35 137 3.79E-15 T 11-10-2018 IX88_03590 e0102c0d1c292858a4752551d8de096c 497 SUPERFAMILY SSF56322 15 490 4.97E-152 T 11-10-2018 IPR005801 ADC synthase GO:0009058 IX88_03590 e0102c0d1c292858a4752551d8de096c 497 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 173 3.3E-37 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 IX88_03590 e0102c0d1c292858a4752551d8de096c 497 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 488 8.4E-161 T 11-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 IX88_03590 e0102c0d1c292858a4752551d8de096c 497 Gene3D G3DSA:3.60.120.10 1 494 2.1E-174 T 11-10-2018 IPR005801 ADC synthase GO:0009058 IX88_03590 e0102c0d1c292858a4752551d8de096c 497 PRINTS PR00095 Anthranilate synthase component I signature 422 436 2.3E-23 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 IX88_03590 e0102c0d1c292858a4752551d8de096c 497 PRINTS PR00095 Anthranilate synthase component I signature 328 341 2.3E-23 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 IX88_03590 e0102c0d1c292858a4752551d8de096c 497 PRINTS PR00095 Anthranilate synthase component I signature 437 451 2.3E-23 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 IX88_03590 e0102c0d1c292858a4752551d8de096c 497 PRINTS PR00095 Anthranilate synthase component I signature 342 355 2.3E-23 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 IX88_03590 e0102c0d1c292858a4752551d8de096c 497 Pfam PF00425 chorismate binding enzyme 221 480 1.1E-91 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal IX88_01315 2ecbbc28fe333d8e6db4c66ef354ee88 137 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 52 8.8E-12 T 11-10-2018 IX88_01315 2ecbbc28fe333d8e6db4c66ef354ee88 137 Gene3D G3DSA:1.10.10.10 2 55 8.8E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_01315 2ecbbc28fe333d8e6db4c66ef354ee88 137 SUPERFAMILY SSF54909 65 131 2.01E-5 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel IX88_01315 2ecbbc28fe333d8e6db4c66ef354ee88 137 Gene3D G3DSA:3.30.70.920 56 137 1.4E-7 T 11-10-2018 IX88_01315 2ecbbc28fe333d8e6db4c66ef354ee88 137 SUPERFAMILY SSF46785 5 60 4.96E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_01315 2ecbbc28fe333d8e6db4c66ef354ee88 137 SMART SM00344 5 107 4.7E-15 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 IX88_01315 2ecbbc28fe333d8e6db4c66ef354ee88 137 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 2.5E-7 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_01315 2ecbbc28fe333d8e6db4c66ef354ee88 137 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 2.5E-7 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_01315 2ecbbc28fe333d8e6db4c66ef354ee88 137 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 2.5E-7 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_06810 09278f9aeea46c9bdb1d849625d76927 160 Gene3D G3DSA:3.90.45.10 1 160 1.9E-53 T 11-10-2018 IPR036821 Peptide deformylase superfamily IX88_06810 09278f9aeea46c9bdb1d849625d76927 160 Hamap MF_00163 Peptide deformylase [def]. 3 160 24.352 T 11-10-2018 IPR023635 Peptide deformylase IX88_06810 09278f9aeea46c9bdb1d849625d76927 160 Pfam PF01327 Polypeptide deformylase 6 160 6.3E-44 T 11-10-2018 IPR023635 Peptide deformylase IX88_06810 09278f9aeea46c9bdb1d849625d76927 160 SUPERFAMILY SSF56420 4 160 2.09E-52 T 11-10-2018 IPR036821 Peptide deformylase superfamily IX88_06810 09278f9aeea46c9bdb1d849625d76927 160 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 9 160 8.9E-42 T 11-10-2018 IPR023635 Peptide deformylase IX88_06810 09278f9aeea46c9bdb1d849625d76927 160 PRINTS PR01576 Peptide deformylase signature 132 160 1.9E-31 T 11-10-2018 IPR023635 Peptide deformylase IX88_06810 09278f9aeea46c9bdb1d849625d76927 160 PRINTS PR01576 Peptide deformylase signature 37 66 1.9E-31 T 11-10-2018 IPR023635 Peptide deformylase IX88_06810 09278f9aeea46c9bdb1d849625d76927 160 PRINTS PR01576 Peptide deformylase signature 113 131 1.9E-31 T 11-10-2018 IPR023635 Peptide deformylase IX88_06810 09278f9aeea46c9bdb1d849625d76927 160 PRINTS PR01576 Peptide deformylase signature 101 112 1.9E-31 T 11-10-2018 IPR023635 Peptide deformylase IX88_06810 09278f9aeea46c9bdb1d849625d76927 160 PIRSF PIRSF004749 1 160 4.5E-47 T 11-10-2018 IPR023635 Peptide deformylase IX88_08535 c2fd88d345e3c027746d8b53890f020d 1920 Gene3D G3DSA:2.160.20.10 91 388 3.5E-87 T 11-10-2018 IPR012334 Pectin lyase fold IX88_08535 c2fd88d345e3c027746d8b53890f020d 1920 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 25 1.5E-7 T 11-10-2018 IPR024973 ESPR domain IX88_08535 c2fd88d345e3c027746d8b53890f020d 1920 SMART SM00912 100 219 1.6E-34 T 11-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal IX88_08535 c2fd88d345e3c027746d8b53890f020d 1920 SUPERFAMILY SSF51126 99 410 1.51E-47 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor IX88_08535 c2fd88d345e3c027746d8b53890f020d 1920 Pfam PF04830 Possible hemagglutinin (DUF637) 1537 1702 4.6E-30 T 11-10-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative IX88_08535 c2fd88d345e3c027746d8b53890f020d 1920 Pfam PF05860 haemagglutination activity domain 91 218 3.4E-24 T 11-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal IX88_08535 c2fd88d345e3c027746d8b53890f020d 1920 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 117 214 5.0E-19 T 11-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal IX88_05625 311dbbe08fa7ac2ea06f548598a9ac6f 290 Gene3D G3DSA:3.40.190.10 164 253 9.4E-27 T 11-10-2018 IX88_05625 311dbbe08fa7ac2ea06f548598a9ac6f 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 6.2E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_05625 311dbbe08fa7ac2ea06f548598a9ac6f 290 SUPERFAMILY SSF53850 94 285 1.81E-16 T 11-10-2018 IX88_05625 311dbbe08fa7ac2ea06f548598a9ac6f 290 Gene3D G3DSA:1.10.10.10 4 94 6.7E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_05625 311dbbe08fa7ac2ea06f548598a9ac6f 290 Gene3D G3DSA:3.40.190.10 100 279 9.4E-27 T 11-10-2018 IX88_05625 311dbbe08fa7ac2ea06f548598a9ac6f 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_05625 311dbbe08fa7ac2ea06f548598a9ac6f 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_05625 311dbbe08fa7ac2ea06f548598a9ac6f 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_05625 311dbbe08fa7ac2ea06f548598a9ac6f 290 Pfam PF03466 LysR substrate binding domain 94 282 2.1E-11 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_05625 311dbbe08fa7ac2ea06f548598a9ac6f 290 SUPERFAMILY SSF46785 3 83 1.36E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_09105 842743d83d4ba57a60f531354fc7f335 139 TIGRFAM TIGR00807 malonate_madL: malonate transporter, MadL subunit 1 122 1.8E-50 T 11-10-2018 IPR004690 Malonate transporter MadL subunit GO:0016020 IX88_09105 842743d83d4ba57a60f531354fc7f335 139 Pfam PF03817 Malonate transporter MadL subunit 1 117 3.4E-48 T 11-10-2018 IPR004690 Malonate transporter MadL subunit GO:0016020 IX88_01375 cd502c99531cc809a818aac6c7830820 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 188 201 - T 11-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 IX88_01375 cd502c99531cc809a818aac6c7830820 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 123 7.6E-23 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 IX88_01375 cd502c99531cc809a818aac6c7830820 218 SUPERFAMILY SSF50475 15 218 2.36E-60 T 11-10-2018 IX88_01375 cd502c99531cc809a818aac6c7830820 218 PIRSF PIRSF000190 1 218 8.8E-75 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 IX88_01375 cd502c99531cc809a818aac6c7830820 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 178 218 7.9E-19 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 IX88_01375 cd502c99531cc809a818aac6c7830820 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 14 218 35.879 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 IX88_01375 cd502c99531cc809a818aac6c7830820 218 Gene3D G3DSA:2.30.110.10 4 218 1.2E-75 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 IX88_01375 cd502c99531cc809a818aac6c7830820 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 7 218 2.8E-75 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 IX88_11460 4213b481e43b3c86a427df2cb43bfbca 317 SMART SM00903 21 164 6.0E-60 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 IX88_11460 4213b481e43b3c86a427df2cb43bfbca 317 SUPERFAMILY SSF50475 6 167 2.99E-50 T 11-10-2018 IX88_11460 4213b481e43b3c86a427df2cb43bfbca 317 Gene3D G3DSA:2.30.110.10 10 182 4.2E-53 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 IX88_11460 4213b481e43b3c86a427df2cb43bfbca 317 Pfam PF01613 Flavin reductase like domain 22 162 8.9E-36 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 IX88_11460 4213b481e43b3c86a427df2cb43bfbca 317 SUPERFAMILY SSF46785 176 314 6.39E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_11460 4213b481e43b3c86a427df2cb43bfbca 317 Gene3D G3DSA:1.10.10.10 183 316 3.7E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_06430 a120e0743f77bdbabd4cf4fcfc6d45d7 151 Pfam PF01814 Hemerythrin HHE cation binding domain 12 124 1.1E-8 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 IX88_06430 a120e0743f77bdbabd4cf4fcfc6d45d7 151 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 123 4.8E-30 T 11-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 IX88_06430 a120e0743f77bdbabd4cf4fcfc6d45d7 151 Gene3D G3DSA:1.20.120.50 1 127 6.2E-31 T 11-10-2018 IPR035938 Hemerythrin-like superfamily IX88_06430 a120e0743f77bdbabd4cf4fcfc6d45d7 151 SUPERFAMILY SSF47188 2 124 1.44E-27 T 11-10-2018 IPR035938 Hemerythrin-like superfamily IX88_13585 e45a16683de2a06f9d146b561599e4ea 259 Gene3D G3DSA:1.20.120.1630 53 255 5.2E-18 T 11-10-2018 IX88_13585 e45a16683de2a06f9d146b561599e4ea 259 Pfam PF06966 Protein of unknown function (DUF1295) 17 249 2.0E-56 T 11-10-2018 IPR010721 Protein of unknown function DUF1295 IX88_05850 3504eb0289f4aae083998957891e7d4e 399 SUPERFAMILY SSF160996 194 345 6.54E-34 T 11-10-2018 IX88_05850 3504eb0289f4aae083998957891e7d4e 399 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 8 397 1.0E-121 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like IX88_05850 3504eb0289f4aae083998957891e7d4e 399 Gene3D G3DSA:3.50.50.60 9 393 7.8E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_05850 3504eb0289f4aae083998957891e7d4e 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 367 374 1.3E-7 T 11-10-2018 IX88_05850 3504eb0289f4aae083998957891e7d4e 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 168 1.3E-7 T 11-10-2018 IX88_05850 3504eb0289f4aae083998957891e7d4e 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.3E-7 T 11-10-2018 IX88_05850 3504eb0289f4aae083998957891e7d4e 399 Gene3D G3DSA:1.10.8.260 265 327 7.8E-123 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily IX88_05850 3504eb0289f4aae083998957891e7d4e 399 SUPERFAMILY SSF51905 4 399 2.03E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_05850 3504eb0289f4aae083998957891e7d4e 399 Pfam PF03486 HI0933-like protein 7 397 5.5E-141 T 11-10-2018 IX88_05850 3504eb0289f4aae083998957891e7d4e 399 Gene3D G3DSA:2.40.30.10 192 344 7.8E-123 T 11-10-2018 IX88_06765 3bed96eb15e59fc89e4a21daa4135a11 407 Gene3D G3DSA:1.20.1250.20 8 200 4.1E-34 T 11-10-2018 IX88_06765 3bed96eb15e59fc89e4a21daa4135a11 407 Gene3D G3DSA:1.20.1250.20 217 406 1.3E-31 T 11-10-2018 IX88_06765 3bed96eb15e59fc89e4a21daa4135a11 407 Pfam PF07690 Major Facilitator Superfamily 18 369 1.6E-48 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_06765 3bed96eb15e59fc89e4a21daa4135a11 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 282 299 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_06765 3bed96eb15e59fc89e4a21daa4135a11 407 SUPERFAMILY SSF103473 5 406 2.88E-69 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_06090 fb6bc40b285cff95b70e5b7ec8ca97ae 157 SMART SM00257 107 156 9.1E-14 T 11-10-2018 IPR018392 LysM domain IX88_06090 fb6bc40b285cff95b70e5b7ec8ca97ae 157 Pfam PF04972 BON domain 44 99 5.4E-8 T 11-10-2018 IPR007055 BON domain IX88_06090 fb6bc40b285cff95b70e5b7ec8ca97ae 157 Gene3D G3DSA:3.10.350.10 107 155 3.2E-15 T 11-10-2018 IPR036779 LysM domain superfamily IX88_06090 fb6bc40b285cff95b70e5b7ec8ca97ae 157 SUPERFAMILY SSF54106 106 156 4.32E-8 T 11-10-2018 IX88_06090 fb6bc40b285cff95b70e5b7ec8ca97ae 157 Pfam PF01476 LysM domain 108 156 6.7E-14 T 11-10-2018 IPR018392 LysM domain IX88_06350 7a61b763bb3814effddc97b547b8c250 315 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 312 1.0E-120 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 IX88_06350 7a61b763bb3814effddc97b547b8c250 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 5.3E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_06350 7a61b763bb3814effddc97b547b8c250 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 5.3E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_06350 7a61b763bb3814effddc97b547b8c250 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 5.3E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_06350 7a61b763bb3814effddc97b547b8c250 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 5.3E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_06350 7a61b763bb3814effddc97b547b8c250 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 5.3E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_06350 7a61b763bb3814effddc97b547b8c250 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 5.3E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_06350 7a61b763bb3814effddc97b547b8c250 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 5.3E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_06350 7a61b763bb3814effddc97b547b8c250 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 5.3E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_06350 7a61b763bb3814effddc97b547b8c250 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 293 312 5.3E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_06350 7a61b763bb3814effddc97b547b8c250 315 Gene3D G3DSA:3.50.50.60 117 243 2.3E-122 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_06350 7a61b763bb3814effddc97b547b8c250 315 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 300 2.3E-49 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_06350 7a61b763bb3814effddc97b547b8c250 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 5.3E-39 T 11-10-2018 IX88_06350 7a61b763bb3814effddc97b547b8c250 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 5.3E-39 T 11-10-2018 IX88_06350 7a61b763bb3814effddc97b547b8c250 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.3E-39 T 11-10-2018 IX88_06350 7a61b763bb3814effddc97b547b8c250 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 5.3E-39 T 11-10-2018 IX88_06350 7a61b763bb3814effddc97b547b8c250 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 5.3E-39 T 11-10-2018 IX88_06350 7a61b763bb3814effddc97b547b8c250 315 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 IX88_06350 7a61b763bb3814effddc97b547b8c250 315 Gene3D G3DSA:3.50.50.60 8 311 2.3E-122 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_06350 7a61b763bb3814effddc97b547b8c250 315 SUPERFAMILY SSF51905 2 313 2.52E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_15390 81d46b06a6cc2361e8ae42b0db323b8b 377 Gene3D G3DSA:3.40.50.620 1 214 4.0E-89 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_15390 81d46b06a6cc2361e8ae42b0db323b8b 377 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 3 367 39.063 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 IX88_15390 81d46b06a6cc2361e8ae42b0db323b8b 377 Gene3D G3DSA:2.40.30.10 284 374 4.1E-28 T 11-10-2018 IX88_15390 81d46b06a6cc2361e8ae42b0db323b8b 377 SUPERFAMILY SSF52402 2 245 3.53E-55 T 11-10-2018 IX88_15390 81d46b06a6cc2361e8ae42b0db323b8b 377 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3 366 1.7E-133 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 IX88_15390 81d46b06a6cc2361e8ae42b0db323b8b 377 Pfam PF03054 tRNA methyl transferase 3 366 3.7E-134 T 11-10-2018 IX88_15390 81d46b06a6cc2361e8ae42b0db323b8b 377 Gene3D G3DSA:2.30.30.280 215 282 2.5E-26 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 IX88_10730 6e12ec3408686c50fa5901e776a6cc91 206 SMART SM00382 23 200 7.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_10730 6e12ec3408686c50fa5901e776a6cc91 206 Pfam PF00005 ABC transporter 25 160 2.6E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_10730 6e12ec3408686c50fa5901e776a6cc91 206 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_10730 6e12ec3408686c50fa5901e776a6cc91 206 Gene3D G3DSA:3.40.50.300 4 206 8.6E-52 T 11-10-2018 IX88_10730 6e12ec3408686c50fa5901e776a6cc91 206 SUPERFAMILY SSF52540 14 205 6.25E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_12050 c500f35c57eab6438ee4be3a7274edc7 161 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 16 153 8.4E-56 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 IX88_12050 c500f35c57eab6438ee4be3a7274edc7 161 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 16 157 30.805 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 IX88_12050 c500f35c57eab6438ee4be3a7274edc7 161 SUPERFAMILY SSF54637 16 158 3.55E-45 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_12050 c500f35c57eab6438ee4be3a7274edc7 161 Gene3D G3DSA:3.10.129.10 11 158 9.9E-55 T 11-10-2018 IX88_12050 c500f35c57eab6438ee4be3a7274edc7 161 Pfam PF07977 FabA-like domain 25 149 1.3E-31 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 IX88_01900 ff1e88d15ff4a3b0efba2e185b703141 297 PIRSF PIRSF001365 3 297 3.9E-99 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_01900 ff1e88d15ff4a3b0efba2e185b703141 297 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 293 3.2E-113 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IX88_01900 ff1e88d15ff4a3b0efba2e185b703141 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 139 169 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 IX88_01900 ff1e88d15ff4a3b0efba2e185b703141 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 44 61 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IX88_01900 ff1e88d15ff4a3b0efba2e185b703141 297 Pfam PF00701 Dihydrodipicolinate synthetase family 9 293 4.3E-104 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_01900 ff1e88d15ff4a3b0efba2e185b703141 297 SMART SM01130 7 295 4.7E-145 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_01900 ff1e88d15ff4a3b0efba2e185b703141 297 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 7 293 65.772 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IX88_01900 ff1e88d15ff4a3b0efba2e185b703141 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 2.8E-37 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_01900 ff1e88d15ff4a3b0efba2e185b703141 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 2.8E-37 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_01900 ff1e88d15ff4a3b0efba2e185b703141 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 2.8E-37 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_01900 ff1e88d15ff4a3b0efba2e185b703141 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 109 125 2.8E-37 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_01900 ff1e88d15ff4a3b0efba2e185b703141 297 SUPERFAMILY SSF51569 8 295 1.67E-107 T 11-10-2018 IX88_01900 ff1e88d15ff4a3b0efba2e185b703141 297 Gene3D G3DSA:3.20.20.70 7 297 4.6E-127 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_09560 fc2bbcf551a977deb0f022df393439db 362 SUPERFAMILY SSF46548 148 265 1.2E-16 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 IX88_09560 fc2bbcf551a977deb0f022df393439db 362 Pfam PF08331 Domain of unknown function (DUF1730) 71 149 8.1E-24 T 11-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 IX88_09560 fc2bbcf551a977deb0f022df393439db 362 Pfam PF13484 4Fe-4S double cluster binding domain 201 265 5.2E-20 T 11-10-2018 IX88_09560 fc2bbcf551a977deb0f022df393439db 362 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 23 358 1.2E-140 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 IX88_09560 fc2bbcf551a977deb0f022df393439db 362 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 16 324 45.765 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 IX88_09560 fc2bbcf551a977deb0f022df393439db 362 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 202 213 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IX88_05810 f9a1603006a39fff1111ec0640c2643c 97 SMART SM00357 7 68 2.3E-6 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 IX88_05810 f9a1603006a39fff1111ec0640c2643c 97 Pfam PF00313 'Cold-shock' DNA-binding domain 7 67 5.3E-12 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 IX88_05810 f9a1603006a39fff1111ec0640c2643c 97 PIRSF PIRSF002599 1 91 1.8E-13 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 IX88_05810 f9a1603006a39fff1111ec0640c2643c 97 Gene3D G3DSA:2.40.50.140 1 86 1.2E-16 T 11-10-2018 IX88_05810 f9a1603006a39fff1111ec0640c2643c 97 SUPERFAMILY SSF50249 4 67 1.69E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_13410 574f8a5447230ac47484967c0f9aa34a 75 Pfam PF01084 Ribosomal protein S18 19 68 1.3E-23 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13410 574f8a5447230ac47484967c0f9aa34a 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13410 574f8a5447230ac47484967c0f9aa34a 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.834 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13410 574f8a5447230ac47484967c0f9aa34a 75 SUPERFAMILY SSF46911 3 74 1.57E-28 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13410 574f8a5447230ac47484967c0f9aa34a 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 9.1E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13410 574f8a5447230ac47484967c0f9aa34a 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 9.1E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13410 574f8a5447230ac47484967c0f9aa34a 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 9.1E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13410 574f8a5447230ac47484967c0f9aa34a 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 9.1E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13410 574f8a5447230ac47484967c0f9aa34a 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 3.6E-35 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13410 574f8a5447230ac47484967c0f9aa34a 75 Gene3D G3DSA:4.10.640.10 1 75 7.4E-27 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_13410 574f8a5447230ac47484967c0f9aa34a 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 20 71 8.0E-23 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_16205 475c9be19ae14fb22bbb0e3481da8ff0 325 SMART SM00978 194 324 7.5E-30 T 11-10-2018 IPR007379 Tim44-like domain IX88_16205 475c9be19ae14fb22bbb0e3481da8ff0 325 SUPERFAMILY SSF54427 210 324 1.58E-7 T 11-10-2018 IPR032710 NTF2-like domain superfamily IX88_16205 475c9be19ae14fb22bbb0e3481da8ff0 325 Pfam PF04280 Tim44-like domain 209 324 5.4E-11 T 11-10-2018 IPR007379 Tim44-like domain IX88_03100 267abd211191f96831dfc032195e91f0 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 42 72 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site IX88_03100 267abd211191f96831dfc032195e91f0 213 SUPERFAMILY SSF46689 17 83 5.03E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_03100 267abd211191f96831dfc032195e91f0 213 SUPERFAMILY SSF48498 97 210 7.87E-25 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_03100 267abd211191f96831dfc032195e91f0 213 Gene3D G3DSA:1.10.10.60 16 84 1.3E-25 T 11-10-2018 IX88_03100 267abd211191f96831dfc032195e91f0 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 73 3.5E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_03100 267abd211191f96831dfc032195e91f0 213 Gene3D G3DSA:1.10.357.10 90 211 7.2E-30 T 11-10-2018 IX88_08615 4ae7d71e780d7fc7dd3bb7585faf85c9 354 PIRSF PIRSF000296 12 343 3.9E-97 T 11-10-2018 IPR024168 Catalase, SrpA-type, predicted IX88_08615 4ae7d71e780d7fc7dd3bb7585faf85c9 354 Gene3D G3DSA:1.20.1280.120 55 336 3.9E-92 T 11-10-2018 IX88_08615 4ae7d71e780d7fc7dd3bb7585faf85c9 354 SMART SM01060 20 354 5.1E-5 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 IX88_08615 4ae7d71e780d7fc7dd3bb7585faf85c9 354 Gene3D G3DSA:2.40.180.20 65 322 3.9E-92 T 11-10-2018 IX88_08615 4ae7d71e780d7fc7dd3bb7585faf85c9 354 SUPERFAMILY SSF56634 30 341 2.36E-75 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 IX88_08615 4ae7d71e780d7fc7dd3bb7585faf85c9 354 Pfam PF00199 Catalase 58 340 6.3E-20 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 IX88_03005 15cc9ac56566f5379b7d1cd749b5d1cb 306 Pfam PF04261 Dyp-type peroxidase family 27 298 6.6E-70 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 IX88_03005 15cc9ac56566f5379b7d1cd749b5d1cb 306 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 4 297 3.7E-66 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 IX88_03005 15cc9ac56566f5379b7d1cd749b5d1cb 306 SUPERFAMILY SSF54909 3 303 1.97E-88 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel IX88_02625 259799b7967258498f5e702b3f949e0d 204 Pfam PF02397 Bacterial sugar transferase 2 176 3.4E-66 T 11-10-2018 IPR003362 Bacterial sugar transferase IX88_13035 c8b94f35ddf53096674359e45ae99a3f 390 SUPERFAMILY SSF56796 13 389 3.79E-136 T 11-10-2018 IX88_13035 c8b94f35ddf53096674359e45ae99a3f 390 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 267 287 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 IX88_13035 c8b94f35ddf53096674359e45ae99a3f 390 Gene3D G3DSA:1.20.1090.10 193 390 5.1E-78 T 11-10-2018 IX88_13035 c8b94f35ddf53096674359e45ae99a3f 390 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 180 208 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 IX88_13035 c8b94f35ddf53096674359e45ae99a3f 390 Gene3D G3DSA:3.40.50.1970 3 191 7.7E-55 T 11-10-2018 IX88_13035 c8b94f35ddf53096674359e45ae99a3f 390 Pfam PF00465 Iron-containing alcohol dehydrogenase 20 382 5.5E-127 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 IX88_04030 ebdc4d74380ddaf8f9fa331a736782f8 500 Pfam PF13245 AAA domain 13 252 5.2E-13 T 11-10-2018 IX88_04030 ebdc4d74380ddaf8f9fa331a736782f8 500 Gene3D G3DSA:3.40.50.300 272 486 2.6E-12 T 11-10-2018 IX88_04030 ebdc4d74380ddaf8f9fa331a736782f8 500 SUPERFAMILY SSF52540 9 481 5.25E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04030 ebdc4d74380ddaf8f9fa331a736782f8 500 Pfam PF13361 UvrD-like helicase C-terminal domain 424 477 3.3E-10 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 IX88_01475 040fd91a06623f18be2b250bd5f3dcf2 70 Pfam PF08410 Domain of unknown function (DUF1737) 1 50 3.7E-22 T 11-10-2018 IPR013619 Domain of unknown function DUF1737 IX88_12725 b8dada04b7e932a6f959addbf9d4bbb7 342 Gene3D G3DSA:3.40.50.1820 70 337 5.3E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_12725 b8dada04b7e932a6f959addbf9d4bbb7 342 SUPERFAMILY SSF53474 71 326 3.15E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_12725 b8dada04b7e932a6f959addbf9d4bbb7 342 Pfam PF12146 Serine aminopeptidase, S33 83 318 9.5E-33 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 IX88_06165 5ae9d7af498f3f76238074aedb589d96 192 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 34 191 3.4E-30 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 IX88_06165 5ae9d7af498f3f76238074aedb589d96 192 Pfam PF03550 Outer membrane lipoprotein LolB 41 191 7.3E-39 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 IX88_06165 5ae9d7af498f3f76238074aedb589d96 192 Gene3D G3DSA:2.50.20.10 25 191 5.3E-35 T 11-10-2018 IX88_06165 5ae9d7af498f3f76238074aedb589d96 192 SUPERFAMILY SSF89392 21 191 2.24E-34 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX IX88_09285 d181d32fdc6f1ca89d34f1ae360b7155 435 PRINTS PR00173 Glutamate-aspartate symporter signature 201 220 6.3E-37 T 11-10-2018 IX88_09285 d181d32fdc6f1ca89d34f1ae360b7155 435 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 6.3E-37 T 11-10-2018 IX88_09285 d181d32fdc6f1ca89d34f1ae360b7155 435 PRINTS PR00173 Glutamate-aspartate symporter signature 151 173 6.3E-37 T 11-10-2018 IX88_09285 d181d32fdc6f1ca89d34f1ae360b7155 435 PRINTS PR00173 Glutamate-aspartate symporter signature 336 355 6.3E-37 T 11-10-2018 IX88_09285 d181d32fdc6f1ca89d34f1ae360b7155 435 PRINTS PR00173 Glutamate-aspartate symporter signature 363 383 6.3E-37 T 11-10-2018 IX88_09285 d181d32fdc6f1ca89d34f1ae360b7155 435 PRINTS PR00173 Glutamate-aspartate symporter signature 301 327 6.3E-37 T 11-10-2018 IX88_09285 d181d32fdc6f1ca89d34f1ae360b7155 435 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 6.3E-37 T 11-10-2018 IX88_09285 d181d32fdc6f1ca89d34f1ae360b7155 435 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 6.3E-37 T 11-10-2018 IX88_09285 d181d32fdc6f1ca89d34f1ae360b7155 435 Pfam PF00375 Sodium:dicarboxylate symporter family 6 408 1.5E-104 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 IX88_09285 d181d32fdc6f1ca89d34f1ae360b7155 435 SUPERFAMILY SSF118215 6 410 1.44E-110 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IX88_09285 d181d32fdc6f1ca89d34f1ae360b7155 435 Gene3D G3DSA:1.10.3860.10 1 420 3.8E-115 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IX88_16700 2402886506c70fff0b228849aebcd648 236 SUPERFAMILY SSF54292 3 105 4.01E-27 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 IX88_16700 2402886506c70fff0b228849aebcd648 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 110 4.0E-31 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_16700 2402886506c70fff0b228849aebcd648 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IX88_16700 2402886506c70fff0b228849aebcd648 236 Gene3D G3DSA:1.10.1060.10 106 235 1.1E-55 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 IX88_16700 2402886506c70fff0b228849aebcd648 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 6.2E-9 T 11-10-2018 IX88_16700 2402886506c70fff0b228849aebcd648 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 10 228 7.5E-84 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_16700 2402886506c70fff0b228849aebcd648 236 SUPERFAMILY SSF46548 106 233 2.27E-37 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 IX88_16700 2402886506c70fff0b228849aebcd648 236 Gene3D G3DSA:3.10.20.30 1 105 9.7E-36 T 11-10-2018 IPR012675 Beta-grasp domain superfamily IX88_16705 41fe786c3011bd98fe8bb5ed1b45fc3a 611 Pfam PF02910 Fumarate reductase flavoprotein C-term 475 610 2.2E-34 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_16705 41fe786c3011bd98fe8bb5ed1b45fc3a 611 SUPERFAMILY SSF56425 246 364 3.44E-42 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_16705 41fe786c3011bd98fe8bb5ed1b45fc3a 611 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 53 62 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_16705 41fe786c3011bd98fe8bb5ed1b45fc3a 611 PIRSF PIRSF000171 8 592 1.9E-34 T 11-10-2018 IX88_16705 41fe786c3011bd98fe8bb5ed1b45fc3a 611 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 19 606 1.1E-229 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_16705 41fe786c3011bd98fe8bb5ed1b45fc3a 611 Gene3D G3DSA:1.20.58.100 446 559 6.8E-31 T 11-10-2018 IX88_16705 41fe786c3011bd98fe8bb5ed1b45fc3a 611 Pfam PF00890 FAD binding domain 19 416 1.8E-116 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_16705 41fe786c3011bd98fe8bb5ed1b45fc3a 611 SUPERFAMILY SSF46977 465 611 1.09E-38 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_16705 41fe786c3011bd98fe8bb5ed1b45fc3a 611 Gene3D G3DSA:3.50.50.60 19 427 2.8E-162 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_16705 41fe786c3011bd98fe8bb5ed1b45fc3a 611 Gene3D G3DSA:3.90.700.10 256 359 2.8E-162 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_16705 41fe786c3011bd98fe8bb5ed1b45fc3a 611 SUPERFAMILY SSF51905 14 444 2.59E-81 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_16705 41fe786c3011bd98fe8bb5ed1b45fc3a 611 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 17 611 7.0E-265 T 11-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_14180 3fc670e45309b753836792acd9d691d3 441 SUPERFAMILY SSF48024 5 112 3.66E-23 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 IX88_14180 3fc670e45309b753836792acd9d691d3 441 SMART SM00382 197 391 2.0E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_14180 3fc670e45309b753836792acd9d691d3 441 Gene3D G3DSA:1.10.860.10 2 155 1.1E-25 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal IX88_14180 3fc670e45309b753836792acd9d691d3 441 SUPERFAMILY SSF52540 180 418 1.05E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_14180 3fc670e45309b753836792acd9d691d3 441 Gene3D G3DSA:3.40.50.300 156 431 7.2E-79 T 11-10-2018 IX88_14180 3fc670e45309b753836792acd9d691d3 441 Pfam PF00772 DnaB-like helicase N terminal domain 6 102 3.7E-22 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 IX88_14180 3fc670e45309b753836792acd9d691d3 441 Pfam PF03796 DnaB-like helicase C terminal domain 180 428 3.1E-72 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 IX88_12815 17c0e63ecfc43ee6421f728e71f63d63 179 Pfam PF05232 Chlorhexidine efflux transporter 40 99 2.7E-16 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter IX88_12815 17c0e63ecfc43ee6421f728e71f63d63 179 Pfam PF05232 Chlorhexidine efflux transporter 105 166 9.4E-23 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter IX88_03650 fb030f1fb018c18ee3c02781427c724f 231 Gene3D G3DSA:3.40.50.790 68 159 4.0E-76 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich IX88_03650 fb030f1fb018c18ee3c02781427c724f 231 PIRSF PIRSF002155 1 227 9.1E-75 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_03650 fb030f1fb018c18ee3c02781427c724f 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.091 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 IX88_03650 fb030f1fb018c18ee3c02781427c724f 231 Pfam PF00687 Ribosomal protein L1p/L10e family 35 220 1.0E-49 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein IX88_03650 fb030f1fb018c18ee3c02781427c724f 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.8E-100 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 IX88_03650 fb030f1fb018c18ee3c02781427c724f 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_03650 fb030f1fb018c18ee3c02781427c724f 231 SUPERFAMILY SSF56808 6 227 3.92E-79 T 11-10-2018 IPR023674 Ribosomal protein L1-like IX88_03650 fb030f1fb018c18ee3c02781427c724f 231 Gene3D G3DSA:3.30.190.20 21 225 4.0E-76 T 11-10-2018 IX88_16020 637a592bf154c04d003fbe3631e84cbe 204 Gene3D G3DSA:1.10.10.10 119 195 1.9E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_16020 637a592bf154c04d003fbe3631e84cbe 204 Pfam PF08281 Sigma-70, region 4 136 185 8.3E-16 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 IX88_16020 637a592bf154c04d003fbe3631e84cbe 204 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 43 192 2.4E-21 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 IX88_16020 637a592bf154c04d003fbe3631e84cbe 204 Pfam PF04542 Sigma-70 region 2 45 95 1.4E-5 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 IX88_16020 637a592bf154c04d003fbe3631e84cbe 204 SUPERFAMILY SSF88659 105 194 1.27E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like IX88_16020 637a592bf154c04d003fbe3631e84cbe 204 SUPERFAMILY SSF88946 42 97 2.47E-7 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 IX88_12225 03f1ea5f6d136d1ffaf6bf312eaae20d 344 Pfam PF04055 Radical SAM superfamily 27 187 1.3E-24 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 IX88_12225 03f1ea5f6d136d1ffaf6bf312eaae20d 344 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 14 344 1.1E-109 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 IX88_12225 03f1ea5f6d136d1ffaf6bf312eaae20d 344 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 14 344 35.962 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 IX88_12225 03f1ea5f6d136d1ffaf6bf312eaae20d 344 SUPERFAMILY SSF102114 15 286 4.32E-67 T 11-10-2018 IX88_12225 03f1ea5f6d136d1ffaf6bf312eaae20d 344 Pfam PF06463 Molybdenum Cofactor Synthesis C 194 321 1.1E-27 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 IX88_12225 03f1ea5f6d136d1ffaf6bf312eaae20d 344 SMART SM00729 23 229 1.9E-6 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 IX88_12225 03f1ea5f6d136d1ffaf6bf312eaae20d 344 Gene3D G3DSA:3.20.20.70 12 344 3.0E-85 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_12225 03f1ea5f6d136d1ffaf6bf312eaae20d 344 Pfam PF13353 4Fe-4S single cluster domain 30 134 2.2E-9 T 11-10-2018 IX88_06820 8f74a68ded6cbe987327fb0ad618add3 262 SUPERFAMILY SSF46689 214 258 9.68E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_06820 8f74a68ded6cbe987327fb0ad618add3 262 Gene3D G3DSA:1.10.10.60 158 260 2.5E-21 T 11-10-2018 IX88_06820 8f74a68ded6cbe987327fb0ad618add3 262 SMART SM00342 174 256 3.6E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_06820 8f74a68ded6cbe987327fb0ad618add3 262 Pfam PF12833 Helix-turn-helix domain 180 257 6.7E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_06820 8f74a68ded6cbe987327fb0ad618add3 262 Gene3D G3DSA:2.60.120.10 19 92 2.5E-5 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_06820 8f74a68ded6cbe987327fb0ad618add3 262 SUPERFAMILY SSF51182 26 186 1.87E-12 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_06820 8f74a68ded6cbe987327fb0ad618add3 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 1.6E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_06820 8f74a68ded6cbe987327fb0ad618add3 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 1.6E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_06820 8f74a68ded6cbe987327fb0ad618add3 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 209 252 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 IX88_10525 69c0c3224ee4c3d22f02b973d12f48b9 75 Pfam PF01638 HxlR-like helix-turn-helix 1 54 2.5E-15 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type IX88_10525 69c0c3224ee4c3d22f02b973d12f48b9 75 SUPERFAMILY SSF46785 1 64 3.2E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_10525 69c0c3224ee4c3d22f02b973d12f48b9 75 Gene3D G3DSA:1.10.10.10 1 67 1.7E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_06880 6e985b6db7a85402ca7b0fb9cf01d33e 543 Pfam PF01384 Phosphate transporter family 83 532 2.8E-84 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 IX88_01705 073a1c6eb5395873c6da7be686cb2826 398 SUPERFAMILY SSF53474 79 384 3.66E-31 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_01705 073a1c6eb5395873c6da7be686cb2826 398 Gene3D G3DSA:3.40.50.1820 21 241 3.8E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_01705 073a1c6eb5395873c6da7be686cb2826 398 Gene3D G3DSA:3.40.50.1820 308 398 8.9E-8 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_01705 073a1c6eb5395873c6da7be686cb2826 398 PIRSF PIRSF029171 6 394 1.7E-82 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 IX88_01705 073a1c6eb5395873c6da7be686cb2826 398 Pfam PF12146 Serine aminopeptidase, S33 131 359 1.3E-14 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 IX88_11165 0ff1aef8509a19b9a16d3fdd307f7ff7 595 Gene3D G3DSA:3.50.30.80 383 547 1.9E-34 T 11-10-2018 IX88_11165 0ff1aef8509a19b9a16d3fdd307f7ff7 595 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 129 139 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 IX88_11165 0ff1aef8509a19b9a16d3fdd307f7ff7 595 SUPERFAMILY SSF52016 383 579 2.98E-46 T 11-10-2018 IX88_11165 0ff1aef8509a19b9a16d3fdd307f7ff7 595 Pfam PF00920 Dehydratase family 46 572 4.8E-158 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 IX88_11165 0ff1aef8509a19b9a16d3fdd307f7ff7 595 SUPERFAMILY SSF143975 7 380 2.48E-116 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 IX88_13570 5b6091cabe06a41745a78f3212774a05 231 Pfam PF00072 Response regulator receiver domain 6 116 2.7E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_13570 5b6091cabe06a41745a78f3212774a05 231 SMART SM00448 4 116 4.3E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_13570 5b6091cabe06a41745a78f3212774a05 231 Gene3D G3DSA:3.40.50.2300 1 123 2.1E-35 T 11-10-2018 IX88_13570 5b6091cabe06a41745a78f3212774a05 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 1.0E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_13570 5b6091cabe06a41745a78f3212774a05 231 SUPERFAMILY SSF46894 127 224 7.37E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 IX88_13570 5b6091cabe06a41745a78f3212774a05 231 SMART SM00862 150 224 1.2E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_13570 5b6091cabe06a41745a78f3212774a05 231 SUPERFAMILY SSF52172 2 126 2.13E-36 T 11-10-2018 IPR011006 CheY-like superfamily IX88_13570 5b6091cabe06a41745a78f3212774a05 231 Gene3D G3DSA:1.10.10.10 124 229 3.3E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_10640 b7d96d15b39f4227ef10d9b83aa9acd8 204 SUPERFAMILY SSF46689 13 88 8.72E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_10640 b7d96d15b39f4227ef10d9b83aa9acd8 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 63 5.6E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_10640 b7d96d15b39f4227ef10d9b83aa9acd8 204 Gene3D G3DSA:1.10.357.10 65 204 1.3E-26 T 11-10-2018 IX88_10640 b7d96d15b39f4227ef10d9b83aa9acd8 204 Gene3D G3DSA:1.10.10.60 1 64 2.2E-14 T 11-10-2018 IX88_11955 dc3b9680a97ea6b25a5a3a64e9a37bcd 480 Gene3D G3DSA:2.120.10.30 26 480 2.0E-189 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like IX88_11955 dc3b9680a97ea6b25a5a3a64e9a37bcd 480 TIGRFAM TIGR03606 non_repeat_PQQ: dehydrogenase, PQQ-dependent, s-GDH family 23 480 5.0E-240 T 11-10-2018 IPR019893 PQQ-dependent dehydrogenase, s-GDH family KEGG: 00030+1.1.5.2|MetaCyc: PWY-7165 IX88_11955 dc3b9680a97ea6b25a5a3a64e9a37bcd 480 SUPERFAMILY SSF50952 34 456 2.22E-54 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 IX88_11955 dc3b9680a97ea6b25a5a3a64e9a37bcd 480 Pfam PF07995 Glucose / Sorbosone dehydrogenase 369 453 2.5E-9 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase IX88_11955 dc3b9680a97ea6b25a5a3a64e9a37bcd 480 Pfam PF07995 Glucose / Sorbosone dehydrogenase 51 348 1.1E-53 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase IX88_07255 2cd92a11332a00574a2fbf3a93a19b94 133 Gene3D G3DSA:1.10.1660.10 1 129 4.6E-29 T 11-10-2018 IX88_07255 2cd92a11332a00574a2fbf3a93a19b94 133 SUPERFAMILY SSF46955 3 127 4.76E-30 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily IX88_07255 2cd92a11332a00574a2fbf3a93a19b94 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 2.0E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07255 2cd92a11332a00574a2fbf3a93a19b94 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.0E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07255 2cd92a11332a00574a2fbf3a93a19b94 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.0E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07255 2cd92a11332a00574a2fbf3a93a19b94 133 Pfam PF13411 MerR HTH family regulatory protein 4 68 8.8E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07255 2cd92a11332a00574a2fbf3a93a19b94 133 SMART SM00422 3 72 4.0E-23 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_13485 4c0eff5c071e9b8b6557567ec1f441d3 524 SUPERFAMILY SSF52335 3 192 2.62E-72 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily IX88_13485 4c0eff5c071e9b8b6557567ec1f441d3 524 PIRSF PIRSF000414 1 524 5.1E-223 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 IX88_13485 4c0eff5c071e9b8b6557567ec1f441d3 524 Gene3D G3DSA:3.40.140.20 209 365 3.4E-55 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 IX88_13485 4c0eff5c071e9b8b6557567ec1f441d3 524 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 524 45.742 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 IX88_13485 4c0eff5c071e9b8b6557567ec1f441d3 524 Gene3D G3DSA:3.40.140.20 387 524 7.8E-62 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 IX88_13485 4c0eff5c071e9b8b6557567ec1f441d3 524 Gene3D G3DSA:3.40.50.1380 1 195 3.4E-86 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily IX88_13485 4c0eff5c071e9b8b6557567ec1f441d3 524 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 455 7.1E-119 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 IX88_13485 4c0eff5c071e9b8b6557567ec1f441d3 524 SMART SM00851 15 128 5.6E-62 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain IX88_13485 4c0eff5c071e9b8b6557567ec1f441d3 524 SUPERFAMILY SSF53927 212 524 2.21E-129 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 IX88_13485 4c0eff5c071e9b8b6557567ec1f441d3 524 Pfam PF02142 MGS-like domain 15 128 7.9E-30 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain IX88_13485 4c0eff5c071e9b8b6557567ec1f441d3 524 SMART SM00798 133 456 9.9E-212 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 IX88_13485 4c0eff5c071e9b8b6557567ec1f441d3 524 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4 524 7.8E-241 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 IX88_09195 59bcf3128a89c3ccde97c903e6b3ff9b 245 Gene3D G3DSA:1.10.10.10 2 80 7.7E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_09195 59bcf3128a89c3ccde97c903e6b3ff9b 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 79 1.0E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_09195 59bcf3128a89c3ccde97c903e6b3ff9b 245 SMART SM00345 21 79 8.6E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_09195 59bcf3128a89c3ccde97c903e6b3ff9b 245 SUPERFAMILY SSF48008 86 217 2.25E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_09195 59bcf3128a89c3ccde97c903e6b3ff9b 245 SMART SM00895 89 212 1.4E-18 T 11-10-2018 IPR011711 GntR, C-terminal IX88_09195 59bcf3128a89c3ccde97c903e6b3ff9b 245 Gene3D G3DSA:1.20.120.530 83 224 2.6E-28 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_09195 59bcf3128a89c3ccde97c903e6b3ff9b 245 SUPERFAMILY SSF46785 17 83 4.28E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_09195 59bcf3128a89c3ccde97c903e6b3ff9b 245 Pfam PF07729 FCD domain 89 211 8.5E-23 T 11-10-2018 IPR011711 GntR, C-terminal IX88_07755 0c588195558bf5b9adc9d95b9c4627eb 303 TIGRFAM TIGR03249 KdgD: 5-dehydro-4-deoxyglucarate dehydratase 5 298 5.6E-129 T 11-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 IX88_07755 0c588195558bf5b9adc9d95b9c4627eb 303 Gene3D G3DSA:3.20.20.70 1 301 2.0E-95 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_07755 0c588195558bf5b9adc9d95b9c4627eb 303 PIRSF PIRSF001365 6 303 1.5E-63 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_07755 0c588195558bf5b9adc9d95b9c4627eb 303 Hamap MF_00694 Probable 5-dehydro-4-deoxyglucarate dehydratase. 10 301 43.571 T 11-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 IX88_07755 0c588195558bf5b9adc9d95b9c4627eb 303 SMART SM01130 10 301 1.1E-76 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_07755 0c588195558bf5b9adc9d95b9c4627eb 303 Pfam PF00701 Dihydrodipicolinate synthetase family 12 298 4.3E-57 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_07755 0c588195558bf5b9adc9d95b9c4627eb 303 SUPERFAMILY SSF51569 12 300 4.29E-69 T 11-10-2018 IX88_07755 0c588195558bf5b9adc9d95b9c4627eb 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 80 98 1.1E-5 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_07755 0c588195558bf5b9adc9d95b9c4627eb 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 111 127 1.1E-5 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_07755 0c588195558bf5b9adc9d95b9c4627eb 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 44 65 1.1E-5 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_10700 3f07cd767284e71731a99fb23a75fd67 342 Gene3D G3DSA:3.10.20.30 2 100 3.3E-22 T 11-10-2018 IPR012675 Beta-grasp domain superfamily IX88_10700 3f07cd767284e71731a99fb23a75fd67 342 SUPERFAMILY SSF54292 3 89 9.18E-22 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 IX88_10700 3f07cd767284e71731a99fb23a75fd67 342 Gene3D G3DSA:3.40.50.80 202 335 1.3E-32 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_10700 3f07cd767284e71731a99fb23a75fd67 342 SUPERFAMILY SSF52343 206 336 1.57E-34 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_10700 3f07cd767284e71731a99fb23a75fd67 342 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 85 5.6E-16 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 IX88_10700 3f07cd767284e71731a99fb23a75fd67 342 SUPERFAMILY SSF63380 107 204 2.72E-24 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel IX88_10700 3f07cd767284e71731a99fb23a75fd67 342 Pfam PF00970 Oxidoreductase FAD-binding domain 109 204 1.1E-23 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 IX88_10700 3f07cd767284e71731a99fb23a75fd67 342 Gene3D G3DSA:2.40.30.10 101 201 8.8E-26 T 11-10-2018 IX88_10700 3f07cd767284e71731a99fb23a75fd67 342 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 IX88_10700 3f07cd767284e71731a99fb23a75fd67 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 198 207 2.3E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_10700 3f07cd767284e71731a99fb23a75fd67 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 213 232 2.3E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_10700 3f07cd767284e71731a99fb23a75fd67 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 137 149 2.3E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_10700 3f07cd767284e71731a99fb23a75fd67 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 303 311 2.3E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_10700 3f07cd767284e71731a99fb23a75fd67 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 154 161 2.3E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_10700 3f07cd767284e71731a99fb23a75fd67 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 238 247 2.3E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_10700 3f07cd767284e71731a99fb23a75fd67 342 Pfam PF00175 Oxidoreductase NAD-binding domain 214 317 1.7E-20 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 IX88_17245 20d9e0f462ec5b41698572ac1da33520 692 SMART SM00283 428 689 6.2E-89 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 IX88_17245 20d9e0f462ec5b41698572ac1da33520 692 Gene3D G3DSA:1.10.287.950 365 691 4.6E-65 T 11-10-2018 IX88_17245 20d9e0f462ec5b41698572ac1da33520 692 SUPERFAMILY SSF58104 388 690 2.75E-70 T 11-10-2018 IX88_17245 20d9e0f462ec5b41698572ac1da33520 692 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 473 657 1.3E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 IX88_11200 b964d5fe96f9aee57bad76727ea2b237 152 Pfam PF04657 Putative inner membrane exporter, YdcZ 4 139 6.5E-35 T 11-10-2018 IPR006750 Putative inner membrane exporter, YdcZ IX88_06395 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 Gene3D G3DSA:3.30.1330.60 75 217 1.1E-47 T 11-10-2018 IPR036737 OmpA-like domain superfamily IX88_06395 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 ProSitePatterns PS01068 OmpA-like domain. 145 189 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 IX88_06395 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 SUPERFAMILY SSF103088 101 213 2.75E-39 T 11-10-2018 IPR036737 OmpA-like domain superfamily IX88_06395 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 PRINTS PR01021 OMPA domain signature 113 135 2.2E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_06395 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 PRINTS PR01021 OMPA domain signature 143 158 2.2E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_06395 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 PRINTS PR01021 OMPA domain signature 158 174 2.2E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_06395 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 158 175 2.1E-11 T 11-10-2018 IX88_06395 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 196 216 2.1E-11 T 11-10-2018 IX88_06395 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 176 195 2.1E-11 T 11-10-2018 IX88_06395 3eb3c3712eaa5f1ea0e1b59b1d5661de 217 Pfam PF00691 OmpA family 112 207 9.8E-26 T 11-10-2018 IPR006665 OmpA-like domain IX88_09650 112e34f6ff0615b18832cb20915249bb 1250 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 849 860 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 IX88_09650 112e34f6ff0615b18832cb20915249bb 1250 Pfam PF01619 Proline dehydrogenase 206 506 1.3E-97 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 IX88_09650 112e34f6ff0615b18832cb20915249bb 1250 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 547 1049 1.5E-222 T 11-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 IX88_09650 112e34f6ff0615b18832cb20915249bb 1250 Pfam PF00171 Aldehyde dehydrogenase family 598 1048 8.0E-119 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_09650 112e34f6ff0615b18832cb20915249bb 1250 SUPERFAMILY SSF53720 573 1049 8.12E-128 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_09650 112e34f6ff0615b18832cb20915249bb 1250 SUPERFAMILY SSF51730 198 555 9.81E-119 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like IX88_09650 112e34f6ff0615b18832cb20915249bb 1250 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 84 195 1.5E-44 T 11-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 IX88_09650 112e34f6ff0615b18832cb20915249bb 1250 Gene3D G3DSA:3.40.309.10 824 1020 1.4E-144 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_09650 112e34f6ff0615b18832cb20915249bb 1250 Gene3D G3DSA:3.40.605.10 571 1049 1.4E-144 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_09650 112e34f6ff0615b18832cb20915249bb 1250 PIRSF PIRSF000197 11 1249 0.0 T 11-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 IX88_09650 112e34f6ff0615b18832cb20915249bb 1250 Gene3D G3DSA:3.20.20.220 143 547 4.8E-148 T 11-10-2018 IX88_09650 112e34f6ff0615b18832cb20915249bb 1250 Gene3D G3DSA:3.20.20.220 24 122 2.1E-10 T 11-10-2018 IX88_09650 112e34f6ff0615b18832cb20915249bb 1250 SUPERFAMILY SSF81935 25 197 3.92E-62 T 11-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 IX88_11995 6b074dc24075e587dd5341cef504c0c1 178 SUPERFAMILY SSF55729 1 169 6.38E-43 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_11995 6b074dc24075e587dd5341cef504c0c1 178 Gene3D G3DSA:3.40.630.30 1 156 3.9E-44 T 11-10-2018 IX88_11995 6b074dc24075e587dd5341cef504c0c1 178 Pfam PF13302 Acetyltransferase (GNAT) domain 6 147 1.6E-33 T 11-10-2018 IPR000182 GNAT domain IX88_08915 be8e70fff603c52718581b6639914bd5 203 Pfam PF00717 Peptidase S24-like 116 184 2.2E-11 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C IX88_08915 be8e70fff603c52718581b6639914bd5 203 SUPERFAMILY SSF51306 72 198 5.06E-30 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily IX88_08915 be8e70fff603c52718581b6639914bd5 203 Gene3D G3DSA:2.10.109.10 84 202 5.2E-39 T 11-10-2018 IX88_13630 3d8d68fd1ece5feb1a4eec586b9f8230 133 ProSitePatterns PS00769 Transthyretin signature 2. 116 128 - T 11-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 IX88_13630 3d8d68fd1ece5feb1a4eec586b9f8230 133 SMART SM00095 19 133 5.7E-4 T 11-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 IX88_13630 3d8d68fd1ece5feb1a4eec586b9f8230 133 PRINTS PR00189 Transthyretin signature 23 43 7.9E-10 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 IX88_13630 3d8d68fd1ece5feb1a4eec586b9f8230 133 PRINTS PR00189 Transthyretin signature 55 80 7.9E-10 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 IX88_13630 3d8d68fd1ece5feb1a4eec586b9f8230 133 PRINTS PR00189 Transthyretin signature 111 133 7.9E-10 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 IX88_13630 3d8d68fd1ece5feb1a4eec586b9f8230 133 Pfam PF00576 HIUase/Transthyretin family 24 132 6.5E-37 T 11-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 IX88_13630 3d8d68fd1ece5feb1a4eec586b9f8230 133 SUPERFAMILY SSF49472 19 133 1.31E-38 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 IX88_13630 3d8d68fd1ece5feb1a4eec586b9f8230 133 Gene3D G3DSA:2.60.40.180 19 133 2.5E-39 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 IX88_13630 3d8d68fd1ece5feb1a4eec586b9f8230 133 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 22 132 6.5E-42 T 11-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 IX88_00560 d5a1a5d1ac0a2491b0a9b7e5a8a817a1 324 SUPERFAMILY SSF53474 39 319 6.8E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_00560 d5a1a5d1ac0a2491b0a9b7e5a8a817a1 324 Pfam PF00561 alpha/beta hydrolase fold 43 292 9.7E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_00560 d5a1a5d1ac0a2491b0a9b7e5a8a817a1 324 Gene3D G3DSA:3.40.50.1820 36 324 2.9E-85 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_14315 0e17fde790c36bbef0dca78beea04bc7 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 9.1E-28 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 IX88_14315 0e17fde790c36bbef0dca78beea04bc7 70 PRINTS PR00050 Cold shock protein signature 7 22 4.1E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 IX88_14315 0e17fde790c36bbef0dca78beea04bc7 70 PRINTS PR00050 Cold shock protein signature 27 36 4.1E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 IX88_14315 0e17fde790c36bbef0dca78beea04bc7 70 PRINTS PR00050 Cold shock protein signature 42 60 4.1E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 IX88_14315 0e17fde790c36bbef0dca78beea04bc7 70 Gene3D G3DSA:2.40.50.140 1 70 1.8E-27 T 11-10-2018 IX88_14315 0e17fde790c36bbef0dca78beea04bc7 70 PIRSF PIRSF002599 1 70 4.5E-22 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 IX88_14315 0e17fde790c36bbef0dca78beea04bc7 70 SUPERFAMILY SSF50249 2 69 1.16E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_14315 0e17fde790c36bbef0dca78beea04bc7 70 SMART SM00357 6 69 2.9E-28 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 IX88_14315 0e17fde790c36bbef0dca78beea04bc7 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 11-10-2018 IPR019844 Cold-shock conserved site IX88_05125 6c1ebef540cac189f736c4955215f435 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 6 130 2.1E-40 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 IX88_05125 6c1ebef540cac189f736c4955215f435 160 SUPERFAMILY SSF55083 4 147 6.28E-47 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 IX88_05125 6c1ebef540cac189f736c4955215f435 160 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 86 97 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 IX88_05125 6c1ebef540cac189f736c4955215f435 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 130 2.8E-35 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 IX88_05125 6c1ebef540cac189f736c4955215f435 160 Gene3D G3DSA:3.30.70.560 2 153 1.5E-49 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 IX88_03890 3cd93e60056dfac96e6e389b277eca82 146 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 10 138 4.9E-34 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 IX88_03890 3cd93e60056dfac96e6e389b277eca82 146 Pfam PF03652 Holliday junction resolvase 8 138 4.0E-35 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 IX88_03890 3cd93e60056dfac96e6e389b277eca82 146 SMART SM00732 7 107 1.4E-25 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 IX88_03890 3cd93e60056dfac96e6e389b277eca82 146 Gene3D G3DSA:3.30.420.140 5 140 3.0E-35 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 IX88_03890 3cd93e60056dfac96e6e389b277eca82 146 SUPERFAMILY SSF53098 7 139 7.44E-35 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_03890 3cd93e60056dfac96e6e389b277eca82 146 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 7 142 21.179 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 IX88_15340 fe8cddfc779820f035b000ea4e8fb450 727 SUPERFAMILY SSF103473 24 416 4.97E-21 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_15340 fe8cddfc779820f035b000ea4e8fb450 727 SUPERFAMILY SSF103473 623 721 1.96E-6 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_15340 fe8cddfc779820f035b000ea4e8fb450 727 Pfam PF07690 Major Facilitator Superfamily 31 417 1.3E-13 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_15340 fe8cddfc779820f035b000ea4e8fb450 727 Gene3D G3DSA:1.20.1250.20 24 423 5.0E-11 T 11-10-2018 IX88_15340 fe8cddfc779820f035b000ea4e8fb450 727 Gene3D G3DSA:2.60.40.10 487 584 2.2E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_07550 09dca0d83aab0d185342b668f307b1b2 761 SUPERFAMILY SSF53335 7 512 3.38E-117 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_07550 09dca0d83aab0d185342b668f307b1b2 761 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 286 292 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 IX88_07550 09dca0d83aab0d185342b668f307b1b2 761 Gene3D G3DSA:3.40.50.150 157 474 2.5E-90 T 11-10-2018 IX88_07550 09dca0d83aab0d185342b668f307b1b2 761 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 211 225 5.3E-10 T 11-10-2018 IX88_07550 09dca0d83aab0d185342b668f307b1b2 761 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 283 295 5.3E-10 T 11-10-2018 IX88_07550 09dca0d83aab0d185342b668f307b1b2 761 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 178 194 5.3E-10 T 11-10-2018 IX88_07550 09dca0d83aab0d185342b668f307b1b2 761 Gene3D G3DSA:1.20.1260.30 1 79 3.7E-6 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily IX88_07550 09dca0d83aab0d185342b668f307b1b2 761 Pfam PF12161 HsdM N-terminal domain 9 143 1.3E-20 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain IX88_07550 09dca0d83aab0d185342b668f307b1b2 761 Pfam PF02384 N-6 DNA Methylase 154 461 1.3E-57 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 IX88_03250 8aecb1be0d98044cbde852d94ac51a0a 530 Pfam PF00571 CBS domain 381 430 4.1E-4 T 11-10-2018 IPR000644 CBS domain IX88_03250 8aecb1be0d98044cbde852d94ac51a0a 530 Gene3D G3DSA:3.10.580.10 295 443 7.9E-37 T 11-10-2018 IX88_03250 8aecb1be0d98044cbde852d94ac51a0a 530 SMART SM01091 444 524 9.4E-26 T 11-10-2018 IPR005170 Transporter-associated domain IX88_03250 8aecb1be0d98044cbde852d94ac51a0a 530 SUPERFAMILY SSF54631 300 433 1.0E-18 T 11-10-2018 IX88_03250 8aecb1be0d98044cbde852d94ac51a0a 530 Pfam PF03471 Transporter associated domain 445 521 6.8E-20 T 11-10-2018 IPR005170 Transporter-associated domain IX88_03250 8aecb1be0d98044cbde852d94ac51a0a 530 Pfam PF03741 Integral membrane protein TerC family 17 205 1.4E-50 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 IX88_03250 8aecb1be0d98044cbde852d94ac51a0a 530 Gene3D G3DSA:3.30.465.10 444 525 9.0E-21 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 IX88_03250 8aecb1be0d98044cbde852d94ac51a0a 530 SUPERFAMILY SSF56176 444 521 9.82E-20 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 IX88_07910 e563b5b664d9eedd41c3ed38e50b6c48 516 SUPERFAMILY SSF51905 291 491 5.18E-13 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07910 e563b5b664d9eedd41c3ed38e50b6c48 516 Gene3D G3DSA:3.50.50.60 327 504 7.8E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07910 e563b5b664d9eedd41c3ed38e50b6c48 516 Pfam PF00743 Flavin-binding monooxygenase-like 25 366 4.2E-15 T 11-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 IX88_07910 e563b5b664d9eedd41c3ed38e50b6c48 516 Gene3D G3DSA:3.50.50.60 6 180 4.5E-50 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07910 e563b5b664d9eedd41c3ed38e50b6c48 516 SUPERFAMILY SSF51905 24 228 1.38E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07910 e563b5b664d9eedd41c3ed38e50b6c48 516 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 22 44 1.2E-7 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_07910 e563b5b664d9eedd41c3ed38e50b6c48 516 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 183 207 1.2E-7 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_07910 e563b5b664d9eedd41c3ed38e50b6c48 516 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 152 1.2E-7 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_17435 93a07f21c8ebd66685409e419b6d3267 372 Pfam PF02515 CoA-transferase family III 5 361 7.9E-96 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 IX88_17435 93a07f21c8ebd66685409e419b6d3267 372 SUPERFAMILY SSF89796 3 370 1.57E-108 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily IX88_17435 93a07f21c8ebd66685409e419b6d3267 372 Gene3D G3DSA:3.40.50.10540 5 333 7.1E-108 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily IX88_17435 93a07f21c8ebd66685409e419b6d3267 372 Gene3D G3DSA:3.30.1540.10 226 314 7.1E-108 T 11-10-2018 IX88_15945 f400242a78d1160b825292b402a6cca6 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_15945 f400242a78d1160b825292b402a6cca6 401 Pfam PF07690 Major Facilitator Superfamily 16 358 2.0E-35 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_15945 f400242a78d1160b825292b402a6cca6 401 Gene3D G3DSA:1.20.1720.10 10 392 1.4E-91 T 11-10-2018 IX88_15945 f400242a78d1160b825292b402a6cca6 401 SUPERFAMILY SSF103473 8 390 2.35E-58 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_15945 f400242a78d1160b825292b402a6cca6 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 10 381 1.3E-68 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 IX88_07080 c45118caa29fac862e9af1e69479cfae 100 SUPERFAMILY SSF54111 1 99 8.63E-45 T 11-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07080 c45118caa29fac862e9af1e69479cfae 100 Pfam PF00547 Urease, gamma subunit 1 99 9.4E-46 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07080 c45118caa29fac862e9af1e69479cfae 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 1.5E-51 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07080 c45118caa29fac862e9af1e69479cfae 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 1.0E-43 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07080 c45118caa29fac862e9af1e69479cfae 100 Gene3D G3DSA:3.30.280.10 1 100 8.1E-46 T 11-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07080 c45118caa29fac862e9af1e69479cfae 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.006 T 11-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_07080 c45118caa29fac862e9af1e69479cfae 100 PIRSF PIRSF001223 1 100 1.1E-48 T 11-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 IX88_09265 bad720915394b9e728fcb3f0b34c5551 271 Gene3D G3DSA:1.10.3130.10 1 66 5.3E-24 T 11-10-2018 IX88_09265 bad720915394b9e728fcb3f0b34c5551 271 SUPERFAMILY SSF51161 4 169 1.15E-57 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily IX88_09265 bad720915394b9e728fcb3f0b34c5551 271 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 1.2E-75 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 IX88_09265 bad720915394b9e728fcb3f0b34c5551 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 1.7E-6 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_09265 bad720915394b9e728fcb3f0b34c5551 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 3.8E-5 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_09265 bad720915394b9e728fcb3f0b34c5551 271 Pfam PF06426 Serine acetyltransferase, N-terminal 3 35 1.5E-4 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 IX88_09265 bad720915394b9e728fcb3f0b34c5551 271 Gene3D G3DSA:2.160.10.10 67 190 4.1E-38 T 11-10-2018 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 SUPERFAMILY SSF52335 946 1073 3.4E-41 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 SUPERFAMILY SSF52440 557 675 2.16E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 2.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 2.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 Gene3D G3DSA:3.40.50.20 554 662 7.1E-49 T 11-10-2018 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 SUPERFAMILY SSF56059 128 401 1.71E-111 T 11-10-2018 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.0E-74 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 1.9E-36 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1073 13.57 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1068 13.179 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 SMART SM00851 961 1047 2.3E-35 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 Gene3D G3DSA:3.40.50.20 1 116 1.6E-51 T 11-10-2018 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 426 547 1.9E-38 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1058 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 Gene3D G3DSA:3.30.470.20 665 935 2.3E-120 T 11-10-2018 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 Gene3D G3DSA:3.30.470.20 119 403 1.6E-131 T 11-10-2018 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 Pfam PF02142 MGS-like domain 962 1047 1.7E-21 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 Gene3D G3DSA:3.40.50.1380 943 1075 7.5E-37 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 SUPERFAMILY SSF48108 396 554 4.05E-53 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 Gene3D G3DSA:1.10.1030.10 404 553 6.1E-48 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 SMART SM01096 424 547 6.0E-71 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 SUPERFAMILY SSF52440 1 127 1.06E-50 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily IX88_16605 c8595469f3c179dbdce2099019a7485e 1076 SUPERFAMILY SSF56059 673 933 5.83E-104 T 11-10-2018 IX88_03635 d89b9689e9aa9bc51e9bac912fa2fca5 146 PRINTS PR01650 Bacterial translocase SecE signature 87 107 8.9E-15 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 IX88_03635 d89b9689e9aa9bc51e9bac912fa2fca5 146 PRINTS PR01650 Bacterial translocase SecE signature 131 146 8.9E-15 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 IX88_03635 d89b9689e9aa9bc51e9bac912fa2fca5 146 PRINTS PR01650 Bacterial translocase SecE signature 111 131 8.9E-15 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 IX88_03635 d89b9689e9aa9bc51e9bac912fa2fca5 146 PRINTS PR01650 Bacterial translocase SecE signature 66 87 8.9E-15 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 IX88_03635 d89b9689e9aa9bc51e9bac912fa2fca5 146 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 93 121 - T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IX88_03635 d89b9689e9aa9bc51e9bac912fa2fca5 146 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 94 144 5.6E-17 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IX88_03635 d89b9689e9aa9bc51e9bac912fa2fca5 146 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 91 145 6.7E-19 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 IX88_03635 d89b9689e9aa9bc51e9bac912fa2fca5 146 Hamap MF_00422 Protein translocase subunit SecE [secE]. 88 143 12.785 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 IX88_03635 d89b9689e9aa9bc51e9bac912fa2fca5 146 Gene3D G3DSA:1.20.5.1030 88 144 9.5E-16 T 11-10-2018 IPR038379 SecE superfamily IX88_18170 996d914174366eaa71e1bea2c88794bc 197 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 186 5.0E-26 T 11-10-2018 IX88_18170 996d914174366eaa71e1bea2c88794bc 197 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 184 1.3E-26 T 11-10-2018 IX88_18170 996d914174366eaa71e1bea2c88794bc 197 Gene3D G3DSA:3.40.50.1000 3 188 4.1E-27 T 11-10-2018 IPR023214 HAD superfamily IX88_18170 996d914174366eaa71e1bea2c88794bc 197 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 191 1.2E-32 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like IX88_18170 996d914174366eaa71e1bea2c88794bc 197 SUPERFAMILY SSF56784 2 187 2.56E-23 T 11-10-2018 IPR036412 HAD-like superfamily IX88_18170 996d914174366eaa71e1bea2c88794bc 197 Gene3D G3DSA:1.20.1440.100 15 87 4.1E-27 T 11-10-2018 IX88_14285 a3f20761ab478dcd7fa4e5bdfee9de64 339 SUPERFAMILY SSF56349 62 333 2.85E-50 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 IX88_14285 a3f20761ab478dcd7fa4e5bdfee9de64 339 Gene3D G3DSA:1.10.150.130 58 166 6.4E-7 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal IX88_14285 a3f20761ab478dcd7fa4e5bdfee9de64 339 Gene3D G3DSA:1.10.443.10 167 337 7.8E-26 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 IX88_14285 a3f20761ab478dcd7fa4e5bdfee9de64 339 Pfam PF00589 Phage integrase family 167 327 3.3E-19 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 IX88_17635 dc8a038171f1aea789496ce0cc1e66bf 693 Gene3D G3DSA:2.170.130.10 38 159 2.9E-25 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_17635 dc8a038171f1aea789496ce0cc1e66bf 693 SUPERFAMILY SSF56935 32 693 4.76E-89 T 11-10-2018 IX88_17635 dc8a038171f1aea789496ce0cc1e66bf 693 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 148 7.6E-11 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_17635 dc8a038171f1aea789496ce0cc1e66bf 693 Pfam PF00593 TonB dependent receptor 317 691 7.6E-39 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_17635 dc8a038171f1aea789496ce0cc1e66bf 693 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 676 693 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site IX88_05025 30f716724546dd762f490ec3c7537228 394 SUPERFAMILY SSF103473 8 384 1.96E-43 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_05025 30f716724546dd762f490ec3c7537228 394 Pfam PF07690 Major Facilitator Superfamily 21 351 9.8E-24 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_05025 30f716724546dd762f490ec3c7537228 394 Gene3D G3DSA:1.20.1250.20 7 384 9.8E-35 T 11-10-2018 IX88_13280 68c71290d196a3bf64e24ec83ed0fa57 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 2.3E-49 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_13280 68c71290d196a3bf64e24ec83ed0fa57 378 Gene3D G3DSA:1.10.540.10 1 118 5.1E-41 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_13280 68c71290d196a3bf64e24ec83ed0fa57 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 116 4.6E-33 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_13280 68c71290d196a3bf64e24ec83ed0fa57 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 IX88_13280 68c71290d196a3bf64e24ec83ed0fa57 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 3.1E-26 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_13280 68c71290d196a3bf64e24ec83ed0fa57 378 SUPERFAMILY SSF47203 225 375 7.25E-57 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_13280 68c71290d196a3bf64e24ec83ed0fa57 378 SUPERFAMILY SSF56645 2 238 1.44E-78 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_13280 68c71290d196a3bf64e24ec83ed0fa57 378 Gene3D G3DSA:2.40.110.10 119 231 1.4E-43 T 11-10-2018 IX88_13280 68c71290d196a3bf64e24ec83ed0fa57 378 Gene3D G3DSA:1.20.140.10 232 378 5.3E-55 T 11-10-2018 IX88_13280 68c71290d196a3bf64e24ec83ed0fa57 378 PIRSF PIRSF016578 127 376 8.7E-13 T 11-10-2018 IX88_13280 68c71290d196a3bf64e24ec83ed0fa57 378 PIRSF PIRSF016578 3 111 3.8E-6 T 11-10-2018 IX88_14615 60304b25248c85461679115ad37b5b95 275 SUPERFAMILY SSF55920 10 268 7.98E-86 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like IX88_14615 60304b25248c85461679115ad37b5b95 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 219 1.3E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 IX88_14615 60304b25248c85461679115ad37b5b95 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 82 95 1.3E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 IX88_14615 60304b25248c85461679115ad37b5b95 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 176 188 1.3E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 IX88_14615 60304b25248c85461679115ad37b5b95 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 105 121 1.3E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 IX88_14615 60304b25248c85461679115ad37b5b95 275 Pfam PF00557 Metallopeptidase family M24 19 256 5.0E-49 T 11-10-2018 IPR000994 Peptidase M24 IX88_14615 60304b25248c85461679115ad37b5b95 275 Gene3D G3DSA:3.90.230.10 10 274 8.7E-103 T 11-10-2018 IX88_14615 60304b25248c85461679115ad37b5b95 275 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 12 264 8.5E-95 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 IX88_14615 60304b25248c85461679115ad37b5b95 275 Hamap MF_01974 Methionine aminopeptidase [map]. 10 265 40.527 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 IX88_14615 60304b25248c85461679115ad37b5b95 275 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 182 200 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 IX88_16195 a9834d7e04bcd200ab1c5cf7442fa1ca 468 Pfam PF00324 Amino acid permease 23 463 2.5E-103 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 IX88_16195 a9834d7e04bcd200ab1c5cf7442fa1ca 468 Gene3D G3DSA:1.20.1740.10 14 468 2.1E-62 T 11-10-2018 IX88_16195 a9834d7e04bcd200ab1c5cf7442fa1ca 468 PIRSF PIRSF006060 1 468 7.6E-68 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_16195 a9834d7e04bcd200ab1c5cf7442fa1ca 468 ProSitePatterns PS00218 Amino acid permeases signature. 48 78 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 IX88_09685 1d46ec888fade139b2966d1cc59f6164 146 SUPERFAMILY SSF54637 2 144 6.26E-32 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_09685 1d46ec888fade139b2966d1cc59f6164 146 Gene3D G3DSA:3.10.129.10 1 145 1.9E-40 T 11-10-2018 IX88_09685 1d46ec888fade139b2966d1cc59f6164 146 Pfam PF01575 MaoC like domain 16 112 9.3E-14 T 11-10-2018 IPR002539 MaoC-like dehydratase domain IX88_05480 7c733f9a033ea9e9b49edfbeda975c3e 273 Gene3D G3DSA:3.40.50.1000 7 262 3.5E-69 T 11-10-2018 IPR023214 HAD superfamily IX88_05480 7c733f9a033ea9e9b49edfbeda975c3e 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 262 1.1E-51 T 11-10-2018 IPR000150 Cof family GO:0016787 IX88_05480 7c733f9a033ea9e9b49edfbeda975c3e 273 SUPERFAMILY SSF56784 1 263 1.81E-57 T 11-10-2018 IPR036412 HAD-like superfamily IX88_05480 7c733f9a033ea9e9b49edfbeda975c3e 273 Gene3D G3DSA:3.30.1240.10 83 192 3.5E-69 T 11-10-2018 IX88_05480 7c733f9a033ea9e9b49edfbeda975c3e 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 235 4.8E-17 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 IX88_05480 7c733f9a033ea9e9b49edfbeda975c3e 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 262 2.5E-50 T 11-10-2018 IX88_15745 ddbed855fd476b9eca92c6984392c0c8 411 Pfam PF00155 Aminotransferase class I and II 32 385 1.5E-73 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 IX88_15745 ddbed855fd476b9eca92c6984392c0c8 411 SUPERFAMILY SSF53383 4 392 9.25E-118 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_15745 ddbed855fd476b9eca92c6984392c0c8 411 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 IX88_15745 ddbed855fd476b9eca92c6984392c0c8 411 Gene3D G3DSA:3.90.1150.10 27 387 1.0E-134 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_15745 ddbed855fd476b9eca92c6984392c0c8 411 Gene3D G3DSA:3.40.640.10 64 286 1.0E-134 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_13110 db1fa13ca398ece9926ff731ded642bb 314 Gene3D G3DSA:3.40.50.300 11 296 7.1E-94 T 11-10-2018 IX88_13110 db1fa13ca398ece9926ff731ded642bb 314 SUPERFAMILY SSF52540 6 231 5.06E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_13110 db1fa13ca398ece9926ff731ded642bb 314 SUPERFAMILY SSF52540 8 151 1.77E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_13110 db1fa13ca398ece9926ff731ded642bb 314 Pfam PF01715 IPP transferase 41 293 4.4E-79 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 IX88_13110 db1fa13ca398ece9926ff731ded642bb 314 Gene3D G3DSA:1.10.20.140 114 186 7.1E-94 T 11-10-2018 IX88_13110 db1fa13ca398ece9926ff731ded642bb 314 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 296 2.1E-90 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 IX88_13110 db1fa13ca398ece9926ff731ded642bb 314 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 307 29.269 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 IX88_14820 d2d32f65ea7bb258e22389cdfcd3ef02 261 Pfam PF09343 Conserved hypothetical protein 2217 (DUF2460) 184 254 2.4E-11 T 11-10-2018 IPR011740 Protein of unknown function DUF2460 IX88_14820 d2d32f65ea7bb258e22389cdfcd3ef02 261 Pfam PF09343 Conserved hypothetical protein 2217 (DUF2460) 3 163 1.6E-28 T 11-10-2018 IPR011740 Protein of unknown function DUF2460 IX88_17370 006ff5622c2cc86575173b4956f86500 337 Pfam PF08468 Methyltransferase small domain N-terminal 5 156 3.1E-44 T 11-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 IX88_17370 006ff5622c2cc86575173b4956f86500 337 Pfam PF05175 Methyltransferase small domain 164 333 1.1E-50 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 IX88_17370 006ff5622c2cc86575173b4956f86500 337 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 1 337 39.329 T 11-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 IX88_17370 006ff5622c2cc86575173b4956f86500 337 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 266 272 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 IX88_17370 006ff5622c2cc86575173b4956f86500 337 Gene3D G3DSA:3.40.50.150 1 149 5.0E-40 T 11-10-2018 IX88_17370 006ff5622c2cc86575173b4956f86500 337 SUPERFAMILY SSF53335 149 333 6.1E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_17370 006ff5622c2cc86575173b4956f86500 337 Gene3D G3DSA:3.40.50.150 151 337 1.3E-40 T 11-10-2018 IX88_06475 cb7298b84682f8ae4042a658c7b50011 1198 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1089 1156 1.4E-10 T 11-10-2018 IX88_06475 cb7298b84682f8ae4042a658c7b50011 1198 Gene3D G3DSA:3.40.50.300 949 1198 2.3E-28 T 11-10-2018 IX88_06475 cb7298b84682f8ae4042a658c7b50011 1198 Gene3D G3DSA:3.40.50.300 1 323 4.9E-41 T 11-10-2018 IX88_06475 cb7298b84682f8ae4042a658c7b50011 1198 Pfam PF13555 P-loop containing region of AAA domain 14 55 9.8E-7 T 11-10-2018 IX88_06475 cb7298b84682f8ae4042a658c7b50011 1198 SUPERFAMILY SSF52540 1004 1175 3.58E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_06475 cb7298b84682f8ae4042a658c7b50011 1198 SUPERFAMILY SSF52540 1 290 5.11E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04855 5ffd35703c14d607a80c7add3e5b665c 352 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 92 342 4.7E-71 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 IX88_04855 5ffd35703c14d607a80c7add3e5b665c 352 Pfam PF03193 RsgA GTPase 114 285 2.5E-50 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 IX88_04855 5ffd35703c14d607a80c7add3e5b665c 352 SUPERFAMILY SSF52540 128 348 3.42E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04855 5ffd35703c14d607a80c7add3e5b665c 352 Gene3D G3DSA:2.40.50.140 31 116 3.5E-17 T 11-10-2018 IX88_04855 5ffd35703c14d607a80c7add3e5b665c 352 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 34 349 33.127 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 IX88_04855 5ffd35703c14d607a80c7add3e5b665c 352 Gene3D G3DSA:1.10.40.50 285 352 1.6E-21 T 11-10-2018 IX88_04855 5ffd35703c14d607a80c7add3e5b665c 352 Gene3D G3DSA:3.40.50.300 117 284 2.5E-44 T 11-10-2018 IX88_07380 dd99afab452b852d8db405029d55a201 447 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 132 143 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 IX88_07380 dd99afab452b852d8db405029d55a201 447 Gene3D G3DSA:1.10.287.400 380 443 2.4E-31 T 11-10-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 IX88_07380 dd99afab452b852d8db405029d55a201 447 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 20 28 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 IX88_07380 dd99afab452b852d8db405029d55a201 447 TIGRFAM TIGR00032 argG: argininosuccinate synthase 16 422 2.3E-166 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 IX88_07380 dd99afab452b852d8db405029d55a201 447 Gene3D G3DSA:3.90.1260.10 77 370 9.0E-119 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 IX88_07380 dd99afab452b852d8db405029d55a201 447 Gene3D G3DSA:3.40.50.620 17 194 9.0E-119 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_07380 dd99afab452b852d8db405029d55a201 447 SUPERFAMILY SSF52402 7 191 3.97E-35 T 11-10-2018 IX88_07380 dd99afab452b852d8db405029d55a201 447 SUPERFAMILY SSF69864 193 445 6.8E-82 T 11-10-2018 IX88_07380 dd99afab452b852d8db405029d55a201 447 Hamap MF_00581 Argininosuccinate synthase [argG]. 4 446 69.206 T 11-10-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 IX88_07380 dd99afab452b852d8db405029d55a201 447 Pfam PF00764 Arginosuccinate synthase 19 412 5.2E-62 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 IX88_15990 4ee2214d9c6b44e2df892bed4b398721 450 SUPERFAMILY SSF74653 369 449 3.66E-16 T 11-10-2018 IX88_15990 4ee2214d9c6b44e2df892bed4b398721 450 TIGRFAM TIGR02794 tolA_full: protein TolA 204 448 1.4E-23 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 IX88_15990 4ee2214d9c6b44e2df892bed4b398721 450 TIGRFAM TIGR02794 tolA_full: protein TolA 14 249 2.0E-20 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 IX88_15990 4ee2214d9c6b44e2df892bed4b398721 450 Gene3D G3DSA:3.30.1150.10 336 450 3.4E-21 T 11-10-2018 IX88_15990 4ee2214d9c6b44e2df892bed4b398721 450 Pfam PF13103 TonB C terminal 371 433 5.2E-12 T 11-10-2018 IX88_15990 4ee2214d9c6b44e2df892bed4b398721 450 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 382 438 6.6E-10 T 11-10-2018 IPR006260 TonB/TolA, C-terminal IX88_10630 b66d71c32d15de676862c12dc9441491 275 Gene3D G3DSA:3.90.640.20 179 267 2.1E-15 T 11-10-2018 IPR037126 PdaC/RsiV-like superfamily IX88_10630 b66d71c32d15de676862c12dc9441491 275 Gene3D G3DSA:3.30.565.40 57 177 6.2E-9 T 11-10-2018 IX88_10630 b66d71c32d15de676862c12dc9441491 275 Pfam PF11738 Protein of unknown function (DUF3298) 185 252 4.5E-9 T 11-10-2018 IPR021729 Domain of unknown function DUF3298 IX88_06885 b7f381da81a758a898e1cbe803ff86e1 444 Gene3D G3DSA:3.40.50.1100 24 438 4.8E-196 T 11-10-2018 IX88_06885 b7f381da81a758a898e1cbe803ff86e1 444 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 12 438 2.9E-220 T 11-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 IX88_06885 b7f381da81a758a898e1cbe803ff86e1 444 SUPERFAMILY SSF53686 92 438 5.35E-57 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IX88_06885 b7f381da81a758a898e1cbe803ff86e1 444 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 94 394 2.6E-59 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme IX88_06885 b7f381da81a758a898e1cbe803ff86e1 444 Gene3D G3DSA:3.40.50.1100 116 238 4.8E-196 T 11-10-2018 IX88_06885 b7f381da81a758a898e1cbe803ff86e1 444 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 444 260.563 T 11-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 IX88_06885 b7f381da81a758a898e1cbe803ff86e1 444 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 IX88_09260 5eeb24f497aba17ab2d70c14951b2957 313 SUPERFAMILY SSF48452 192 291 2.39E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_09260 5eeb24f497aba17ab2d70c14951b2957 313 Gene3D G3DSA:1.25.40.10 159 308 5.1E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_09190 5749093ef413de71e0595d9bed561917 489 Gene3D G3DSA:1.10.4160.10 8 485 1.9E-103 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily IX88_09190 5749093ef413de71e0595d9bed561917 489 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 25 461 9.2E-92 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 IX88_13620 7f15b5a1d8598a467ed86c86704ebe01 223 Gene3D G3DSA:3.40.50.2300 1 123 7.2E-37 T 11-10-2018 IX88_13620 7f15b5a1d8598a467ed86c86704ebe01 223 SMART SM00448 1 111 5.3E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_13620 7f15b5a1d8598a467ed86c86704ebe01 223 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 218 5.6E-88 T 11-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 IX88_13620 7f15b5a1d8598a467ed86c86704ebe01 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 2.7E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_13620 7f15b5a1d8598a467ed86c86704ebe01 223 Gene3D G3DSA:1.10.10.10 124 222 7.5E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_13620 7f15b5a1d8598a467ed86c86704ebe01 223 SMART SM00862 144 219 1.3E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_13620 7f15b5a1d8598a467ed86c86704ebe01 223 SUPERFAMILY SSF52172 1 179 8.79E-43 T 11-10-2018 IPR011006 CheY-like superfamily IX88_13620 7f15b5a1d8598a467ed86c86704ebe01 223 Pfam PF00072 Response regulator receiver domain 3 112 1.9E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_16255 09e3d41c5e1dbe915b27aea5fce454b7 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site IX88_16255 09e3d41c5e1dbe915b27aea5fce454b7 205 SUPERFAMILY SSF46689 6 81 2.39E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_16255 09e3d41c5e1dbe915b27aea5fce454b7 205 Gene3D G3DSA:1.10.357.10 2 197 3.2E-17 T 11-10-2018 IX88_16255 09e3d41c5e1dbe915b27aea5fce454b7 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 65 5.0E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_16165 481e3922d7dc4de22059e3117f1e8def 249 Gene3D G3DSA:3.40.50.620 1 247 2.1E-84 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_16165 481e3922d7dc4de22059e3117f1e8def 249 Pfam PF01012 Electron transfer flavoprotein domain 30 206 2.1E-45 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 IX88_16165 481e3922d7dc4de22059e3117f1e8def 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 11-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 IX88_16165 481e3922d7dc4de22059e3117f1e8def 249 PIRSF PIRSF000090 1 249 4.3E-81 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 IX88_16165 481e3922d7dc4de22059e3117f1e8def 249 SUPERFAMILY SSF52402 1 242 1.74E-83 T 11-10-2018 IX88_16165 481e3922d7dc4de22059e3117f1e8def 249 SMART SM00893 23 211 9.7E-67 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 IX88_09900 dd8d14bea209fde2e5e93cfee67db34c 303 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 138 286 4.0E-54 T 11-10-2018 IPR005642 Lysine exporter LysO IX88_09900 dd8d14bea209fde2e5e93cfee67db34c 303 Pfam PF03956 Lysine exporter LysO 116 301 2.0E-50 T 11-10-2018 IPR005642 Lysine exporter LysO IX88_17525 c4ad0511fb825461bd84cee62c983a7d 267 Pfam PF00290 Tryptophan synthase alpha chain 8 260 2.0E-87 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 IX88_17525 c4ad0511fb825461bd84cee62c983a7d 267 Gene3D G3DSA:3.20.20.70 1 267 6.3E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_17525 c4ad0511fb825461bd84cee62c983a7d 267 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 34.147 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 IX88_17525 c4ad0511fb825461bd84cee62c983a7d 267 SUPERFAMILY SSF51366 1 245 4.52E-90 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 IX88_17525 c4ad0511fb825461bd84cee62c983a7d 267 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 IX88_17525 c4ad0511fb825461bd84cee62c983a7d 267 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 1.5E-76 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 IX88_17345 668fcaeb8aa911a53e2f50e1028c5af6 96 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 IX88_17345 668fcaeb8aa911a53e2f50e1028c5af6 96 Gene3D G3DSA:3.10.50.40 1 91 3.7E-31 T 11-10-2018 IX88_17345 668fcaeb8aa911a53e2f50e1028c5af6 96 SUPERFAMILY SSF54534 4 88 6.15E-27 T 11-10-2018 IX88_17345 668fcaeb8aa911a53e2f50e1028c5af6 96 Pfam PF00639 PPIC-type PPIASE domain 14 88 1.3E-20 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 IX88_07185 718f5e1d56d99b0a637f2cf9025ae163 259 Pfam PF00691 OmpA family 163 241 2.6E-15 T 11-10-2018 IPR006665 OmpA-like domain IX88_07185 718f5e1d56d99b0a637f2cf9025ae163 259 PRINTS PR01021 OMPA domain signature 183 198 4.8E-7 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_07185 718f5e1d56d99b0a637f2cf9025ae163 259 PRINTS PR01021 OMPA domain signature 198 214 4.8E-7 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_07185 718f5e1d56d99b0a637f2cf9025ae163 259 Pfam PF04355 SmpA / OmlA family 48 112 2.5E-12 T 11-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 IX88_07185 718f5e1d56d99b0a637f2cf9025ae163 259 Gene3D G3DSA:3.30.1450.10 51 124 3.5E-7 T 11-10-2018 IPR037873 BamE-like IX88_07185 718f5e1d56d99b0a637f2cf9025ae163 259 Gene3D G3DSA:3.30.1330.60 133 259 9.5E-27 T 11-10-2018 IPR036737 OmpA-like domain superfamily IX88_07185 718f5e1d56d99b0a637f2cf9025ae163 259 SUPERFAMILY SSF103088 139 258 1.44E-21 T 11-10-2018 IPR036737 OmpA-like domain superfamily IX88_07235 cccacb117797ec2f53ec980f5d834772 440 SUPERFAMILY SSF53092 3 176 5.75E-47 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal IX88_07235 cccacb117797ec2f53ec980f5d834772 440 Gene3D G3DSA:3.40.350.10 4 173 3.1E-51 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal IX88_07235 cccacb117797ec2f53ec980f5d834772 440 SUPERFAMILY SSF55920 177 436 8.37E-85 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like IX88_07235 cccacb117797ec2f53ec980f5d834772 440 SMART SM01011 3 139 1.7E-52 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 IX88_07235 cccacb117797ec2f53ec980f5d834772 440 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 349 361 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site IX88_07235 cccacb117797ec2f53ec980f5d834772 440 Pfam PF00557 Metallopeptidase family M24 182 413 3.7E-62 T 11-10-2018 IPR000994 Peptidase M24 IX88_07235 cccacb117797ec2f53ec980f5d834772 440 Pfam PF05195 Aminopeptidase P, N-terminal domain 8 126 9.2E-36 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 IX88_07235 cccacb117797ec2f53ec980f5d834772 440 Gene3D G3DSA:3.90.230.10 174 440 5.6E-99 T 11-10-2018 IX88_00860 503033322767e73f56762223ccbe2281 471 Gene3D G3DSA:1.20.1600.10 57 437 2.6E-28 T 11-10-2018 IX88_00860 503033322767e73f56762223ccbe2281 471 SUPERFAMILY SSF56954 27 436 2.35E-41 T 11-10-2018 IX88_00860 503033322767e73f56762223ccbe2281 471 Pfam PF02321 Outer membrane efflux protein 63 235 1.9E-9 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IX88_00860 503033322767e73f56762223ccbe2281 471 Pfam PF02321 Outer membrane efflux protein 270 434 1.2E-12 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IX88_10765 e810d7d3f0ac24092c009b7692d6de6e 252 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 252 130.374 T 11-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 IX88_10765 e810d7d3f0ac24092c009b7692d6de6e 252 Pfam PF03070 TENA/THI-4/PQQC family 22 224 9.7E-62 T 11-10-2018 IPR004305 Thiaminase-2/PQQC IX88_10765 e810d7d3f0ac24092c009b7692d6de6e 252 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 8 243 1.2E-128 T 11-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 IX88_10765 e810d7d3f0ac24092c009b7692d6de6e 252 Gene3D G3DSA:1.20.910.10 4 251 2.2E-73 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IX88_10765 e810d7d3f0ac24092c009b7692d6de6e 252 SUPERFAMILY SSF48613 8 251 2.67E-73 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IX88_14005 ec421a55170df5b885d0f5b5d5de28e6 256 Gene3D G3DSA:1.25.40.10 182 256 3.7E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_14005 ec421a55170df5b885d0f5b5d5de28e6 256 SUPERFAMILY SSF81901 117 243 2.62E-8 T 11-10-2018 IX88_14005 ec421a55170df5b885d0f5b5d5de28e6 256 SMART SM00028 210 243 5.3E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IX88_15260 82dce2c87dc341b513cf75840f3fa11b 322 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 47 60 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 IX88_15260 82dce2c87dc341b513cf75840f3fa11b 322 SUPERFAMILY SSF53686 8 316 3.01E-97 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IX88_15260 82dce2c87dc341b513cf75840f3fa11b 322 Gene3D G3DSA:3.40.50.1100 17 312 2.0E-120 T 11-10-2018 IX88_15260 82dce2c87dc341b513cf75840f3fa11b 322 Gene3D G3DSA:3.40.50.1100 55 151 2.0E-120 T 11-10-2018 IX88_15260 82dce2c87dc341b513cf75840f3fa11b 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 21 308 2.6E-78 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme IX88_04825 54c00cdf2cf64cab7b81a689206c93a2 381 SMART SM00564 143 175 0.15 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IX88_04825 54c00cdf2cf64cab7b81a689206c93a2 381 SMART SM00564 103 135 6.9E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IX88_04825 54c00cdf2cf64cab7b81a689206c93a2 381 SMART SM00564 279 310 2.6E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IX88_04825 54c00cdf2cf64cab7b81a689206c93a2 381 SMART SM00564 189 221 29.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IX88_04825 54c00cdf2cf64cab7b81a689206c93a2 381 SMART SM00564 241 272 99.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IX88_04825 54c00cdf2cf64cab7b81a689206c93a2 381 SMART SM00564 320 351 1.1 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IX88_04825 54c00cdf2cf64cab7b81a689206c93a2 381 SUPERFAMILY SSF50998 46 367 1.02E-57 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily IX88_04825 54c00cdf2cf64cab7b81a689206c93a2 381 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 379 1.6E-108 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB IX88_04825 54c00cdf2cf64cab7b81a689206c93a2 381 Pfam PF13360 PQQ-like domain 78 309 2.1E-37 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat IX88_04825 54c00cdf2cf64cab7b81a689206c93a2 381 Gene3D G3DSA:2.130.10.10 46 380 6.0E-78 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 IX88_04825 54c00cdf2cf64cab7b81a689206c93a2 381 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 380 26.622 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB IX88_05855 fdfd5d67c8453d434cf71967a5c9df08 293 Gene3D G3DSA:3.40.50.1100 19 284 3.7E-59 T 11-10-2018 IX88_05855 fdfd5d67c8453d434cf71967a5c9df08 293 PIRSF PIRSF006278 2 290 9.0E-70 T 11-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase IX88_05855 fdfd5d67c8453d434cf71967a5c9df08 293 Gene3D G3DSA:3.40.50.1100 37 142 3.7E-59 T 11-10-2018 IX88_05855 fdfd5d67c8453d434cf71967a5c9df08 293 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 281 1.2E-18 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme IX88_05855 fdfd5d67c8453d434cf71967a5c9df08 293 SUPERFAMILY SSF53686 16 284 2.45E-52 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IX88_13320 0b85228df61326fd79f803f2a388cad3 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.4E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_13320 0b85228df61326fd79f803f2a388cad3 300 Gene3D G3DSA:1.10.10.10 7 92 2.8E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_13320 0b85228df61326fd79f803f2a388cad3 300 Pfam PF03466 LysR substrate binding domain 93 295 8.5E-40 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_13320 0b85228df61326fd79f803f2a388cad3 300 Gene3D G3DSA:3.40.190.290 95 298 2.9E-59 T 11-10-2018 IX88_13320 0b85228df61326fd79f803f2a388cad3 300 SUPERFAMILY SSF46785 8 89 1.25E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_13320 0b85228df61326fd79f803f2a388cad3 300 SUPERFAMILY SSF53850 93 297 9.93E-41 T 11-10-2018 IX88_11720 0b3a362649802dae15bb37f785050c54 758 SMART SM00382 485 652 6.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_11720 0b3a362649802dae15bb37f785050c54 758 SMART SM00382 205 351 4.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_11720 0b3a362649802dae15bb37f785050c54 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 6.8E-15 T 11-10-2018 IPR004176 Clp, N-terminal IX88_11720 0b3a362649802dae15bb37f785050c54 758 Gene3D G3DSA:1.10.1780.10 1 143 1.8E-38 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 IX88_11720 0b3a362649802dae15bb37f785050c54 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 560 578 2.4E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 IX88_11720 0b3a362649802dae15bb37f785050c54 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 489 507 2.4E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 IX88_11720 0b3a362649802dae15bb37f785050c54 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 531 549 2.4E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 IX88_11720 0b3a362649802dae15bb37f785050c54 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 593 607 2.4E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 IX88_11720 0b3a362649802dae15bb37f785050c54 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 484 643 4.7E-48 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IX88_11720 0b3a362649802dae15bb37f785050c54 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 733 0.0 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 IX88_11720 0b3a362649802dae15bb37f785050c54 758 Gene3D G3DSA:3.40.50.300 167 354 6.9E-64 T 11-10-2018 IX88_11720 0b3a362649802dae15bb37f785050c54 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 IX88_11720 0b3a362649802dae15bb37f785050c54 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 305 1.1E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IX88_11720 0b3a362649802dae15bb37f785050c54 758 Gene3D G3DSA:3.40.50.300 437 649 4.6E-81 T 11-10-2018 IX88_11720 0b3a362649802dae15bb37f785050c54 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 516 534 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 IX88_11720 0b3a362649802dae15bb37f785050c54 758 SUPERFAMILY SSF52540 435 727 5.55E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_11720 0b3a362649802dae15bb37f785050c54 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 654 731 4.4E-23 T 11-10-2018 IPR019489 Clp ATPase, C-terminal IX88_11720 0b3a362649802dae15bb37f785050c54 758 SUPERFAMILY SSF52540 168 420 7.9E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_11720 0b3a362649802dae15bb37f785050c54 758 Gene3D G3DSA:1.10.8.60 651 754 3.3E-28 T 11-10-2018 IX88_11720 0b3a362649802dae15bb37f785050c54 758 Gene3D G3DSA:1.10.8.60 355 436 2.3E-31 T 11-10-2018 IX88_11720 0b3a362649802dae15bb37f785050c54 758 SMART SM01086 651 743 1.9E-27 T 11-10-2018 IPR019489 Clp ATPase, C-terminal IX88_11720 0b3a362649802dae15bb37f785050c54 758 SUPERFAMILY SSF81923 1 141 2.49E-49 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 IX88_08775 15730827f271c51cf5f990e6f61bb671 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 454 2.4E-19 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_08775 15730827f271c51cf5f990e6f61bb671 600 Gene3D G3DSA:1.10.540.10 16 160 1.3E-21 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_08775 15730827f271c51cf5f990e6f61bb671 600 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 33 1.4E-11 T 11-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria IX88_08775 15730827f271c51cf5f990e6f61bb671 600 SUPERFAMILY SSF56645 41 280 1.83E-55 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_08775 15730827f271c51cf5f990e6f61bb671 600 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 471 594 6.5E-34 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain IX88_08775 15730827f271c51cf5f990e6f61bb671 600 Gene3D G3DSA:2.40.110.10 162 287 3.3E-27 T 11-10-2018 IX88_08775 15730827f271c51cf5f990e6f61bb671 600 Gene3D G3DSA:1.20.140.10 288 459 3.0E-41 T 11-10-2018 IX88_08775 15730827f271c51cf5f990e6f61bb671 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 273 1.3E-15 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_08775 15730827f271c51cf5f990e6f61bb671 600 SUPERFAMILY SSF47203 288 476 1.93E-46 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_08775 15730827f271c51cf5f990e6f61bb671 600 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 42 158 6.3E-18 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_11770 d62b61eed4241a0f2357e0f51bdd9fc6 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 352 372 2.5E-38 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 IX88_11770 d62b61eed4241a0f2357e0f51bdd9fc6 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 169 186 2.5E-38 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 IX88_11770 d62b61eed4241a0f2357e0f51bdd9fc6 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 244 258 2.5E-38 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 IX88_11770 d62b61eed4241a0f2357e0f51bdd9fc6 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 259 277 2.5E-38 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 IX88_11770 d62b61eed4241a0f2357e0f51bdd9fc6 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 330 347 2.5E-38 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 IX88_11770 d62b61eed4241a0f2357e0f51bdd9fc6 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 214 233 2.5E-38 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 IX88_11770 d62b61eed4241a0f2357e0f51bdd9fc6 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 191 207 2.5E-38 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 IX88_11770 d62b61eed4241a0f2357e0f51bdd9fc6 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 294 312 2.5E-38 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 IX88_11770 d62b61eed4241a0f2357e0f51bdd9fc6 383 Pfam PF02253 Phospholipase A1 117 379 1.2E-104 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 IX88_11770 d62b61eed4241a0f2357e0f51bdd9fc6 383 Gene3D G3DSA:2.40.230.10 123 383 1.6E-87 T 11-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 IX88_11770 d62b61eed4241a0f2357e0f51bdd9fc6 383 SUPERFAMILY SSF56931 118 382 2.09E-89 T 11-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 IX88_07105 18335abaad845fd8265e43ee7b5a5e35 204 Hamap MF_01389 Urease accessory protein UreG [ureG]. 5 203 47.593 T 11-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 IX88_07105 18335abaad845fd8265e43ee7b5a5e35 204 PIRSF PIRSF005624 1 203 1.8E-47 T 11-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 IX88_07105 18335abaad845fd8265e43ee7b5a5e35 204 Gene3D G3DSA:3.40.50.300 7 203 7.6E-50 T 11-10-2018 IX88_07105 18335abaad845fd8265e43ee7b5a5e35 204 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 7 203 4.2E-104 T 11-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 IX88_07105 18335abaad845fd8265e43ee7b5a5e35 204 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 9 179 1.0E-36 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain IX88_07105 18335abaad845fd8265e43ee7b5a5e35 204 SUPERFAMILY SSF52540 4 198 2.55E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_00570 e31d5ab88da7d776c4b40795d99b9aba 246 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 2 238 1.8E-90 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 IX88_00570 e31d5ab88da7d776c4b40795d99b9aba 246 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 246 102.247 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 IX88_00570 e31d5ab88da7d776c4b40795d99b9aba 246 Gene3D G3DSA:1.10.1270.20 170 246 6.5E-30 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 IX88_00570 e31d5ab88da7d776c4b40795d99b9aba 246 PIRSF PIRSF000386 1 246 4.1E-91 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 IX88_00570 e31d5ab88da7d776c4b40795d99b9aba 246 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 225 3.3E-56 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 IX88_00570 e31d5ab88da7d776c4b40795d99b9aba 246 Gene3D G3DSA:3.40.1280.10 1 169 5.1E-63 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IX88_00570 e31d5ab88da7d776c4b40795d99b9aba 246 SUPERFAMILY SSF75217 3 243 7.85E-96 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases IX88_09175 7609d2353f66b155be4729431061787a 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 284 6.7E-28 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_09175 7609d2353f66b155be4729431061787a 289 SUPERFAMILY SSF161098 89 274 1.16E-37 T 11-10-2018 IPR035906 MetI-like superfamily IX88_09175 7609d2353f66b155be4729431061787a 289 Gene3D G3DSA:1.10.3720.10 84 281 2.9E-31 T 11-10-2018 IPR035906 MetI-like superfamily IX88_18090 636fad8f0ffc8e68f3a48fc641d1cc0c 362 Pfam PF02562 PhoH-like protein 120 323 1.5E-95 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 IX88_18090 636fad8f0ffc8e68f3a48fc641d1cc0c 362 Gene3D G3DSA:3.40.50.300 117 323 2.0E-75 T 11-10-2018 IX88_18090 636fad8f0ffc8e68f3a48fc641d1cc0c 362 SUPERFAMILY SSF52540 119 295 6.89E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_18090 636fad8f0ffc8e68f3a48fc641d1cc0c 362 SUPERFAMILY SSF54791 13 71 3.36E-5 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 IX88_00900 4078adb16ca5c1fd2995a5fcc4f69d80 729 Gene3D G3DSA:3.40.1050.10 514 729 1.3E-54 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 IX88_00900 4078adb16ca5c1fd2995a5fcc4f69d80 729 SMART SM00947 558 728 4.4E-48 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 IX88_00900 4078adb16ca5c1fd2995a5fcc4f69d80 729 Pfam PF00916 Sulfate permease family 13 373 2.0E-55 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 IX88_00900 4078adb16ca5c1fd2995a5fcc4f69d80 729 SUPERFAMILY SSF53056 506 728 4.71E-52 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 IX88_00900 4078adb16ca5c1fd2995a5fcc4f69d80 729 Pfam PF00484 Carbonic anhydrase 566 724 1.2E-33 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 IX88_00980 8d21ea6d3bac1327885a5f1e1ba76d34 300 SUPERFAMILY SSF103481 46 144 1.7E-12 T 11-10-2018 IX88_00980 8d21ea6d3bac1327885a5f1e1ba76d34 300 Pfam PF00892 EamA-like transporter family 14 141 6.6E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_00980 8d21ea6d3bac1327885a5f1e1ba76d34 300 Pfam PF00892 EamA-like transporter family 152 283 1.9E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_00980 8d21ea6d3bac1327885a5f1e1ba76d34 300 SUPERFAMILY SSF103481 187 284 8.89E-10 T 11-10-2018 IX88_00420 178b9ecd80066468d685b97aff5ed7a2 447 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 446 3.2E-246 T 11-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 IX88_00420 178b9ecd80066468d685b97aff5ed7a2 447 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 447 59.316 T 11-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 IX88_00420 178b9ecd80066468d685b97aff5ed7a2 447 Pfam PF04996 Succinylarginine dihydrolase 3 446 4.8E-221 T 11-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 IX88_00420 178b9ecd80066468d685b97aff5ed7a2 447 Gene3D G3DSA:3.75.10.20 1 447 7.1E-208 T 11-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 IX88_00420 178b9ecd80066468d685b97aff5ed7a2 447 SUPERFAMILY SSF55909 3 447 1.47E-207 T 11-10-2018 IX88_05200 a395f91bff283699252025eeaa7d35a3 167 SUPERFAMILY SSF55729 6 155 3.26E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_05200 a395f91bff283699252025eeaa7d35a3 167 Pfam PF13673 Acetyltransferase (GNAT) domain 44 148 1.8E-10 T 11-10-2018 IPR000182 GNAT domain IX88_05200 a395f91bff283699252025eeaa7d35a3 167 Gene3D G3DSA:3.40.630.30 8 167 2.8E-28 T 11-10-2018 IX88_09075 47077c207c825a08d6634213357299a3 294 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 14 284 5.2E-100 T 11-10-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 IX88_09075 47077c207c825a08d6634213357299a3 294 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 294 142.893 T 11-10-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 IX88_09075 47077c207c825a08d6634213357299a3 294 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 17 280 1.6E-67 T 11-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 IX88_00575 564cd2f26fbae54fbaaea07a459b5a16 182 SUPERFAMILY SSF50447 10 98 3.43E-22 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily IX88_00575 564cd2f26fbae54fbaaea07a459b5a16 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 12 179 6.3E-45 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 IX88_00575 564cd2f26fbae54fbaaea07a459b5a16 182 Pfam PF01782 RimM N-terminal domain 13 95 4.2E-23 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 IX88_00575 564cd2f26fbae54fbaaea07a459b5a16 182 SUPERFAMILY SSF50346 104 179 1.31E-18 T 11-10-2018 IPR011033 PRC-barrel-like superfamily IX88_00575 564cd2f26fbae54fbaaea07a459b5a16 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 11 182 22.789 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 IX88_00575 564cd2f26fbae54fbaaea07a459b5a16 182 Gene3D G3DSA:2.30.30.240 99 182 8.9E-33 T 11-10-2018 IX88_00575 564cd2f26fbae54fbaaea07a459b5a16 182 Gene3D G3DSA:2.40.30.60 1 98 1.4E-36 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 IX88_00575 564cd2f26fbae54fbaaea07a459b5a16 182 Pfam PF05239 PRC-barrel domain 102 177 1.6E-7 T 11-10-2018 IPR027275 PRC-barrel domain IX88_10460 6b40d8d56a2ed543b85b5ca735fd3e84 339 SUPERFAMILY SSF52922 202 337 2.75E-42 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 IX88_10460 6b40d8d56a2ed543b85b5ca735fd3e84 339 Gene3D G3DSA:3.40.50.920 206 339 2.7E-45 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 IX88_10460 6b40d8d56a2ed543b85b5ca735fd3e84 339 Gene3D G3DSA:3.40.50.970 2 205 3.1E-82 T 11-10-2018 IX88_10460 6b40d8d56a2ed543b85b5ca735fd3e84 339 Pfam PF02780 Transketolase, C-terminal domain 207 329 5.7E-41 T 11-10-2018 IPR033248 Transketolase, C-terminal domain IX88_10460 6b40d8d56a2ed543b85b5ca735fd3e84 339 Pfam PF02779 Transketolase, pyrimidine binding domain 5 192 1.9E-55 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain IX88_10460 6b40d8d56a2ed543b85b5ca735fd3e84 339 SMART SM00861 4 193 3.6E-64 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain IX88_10460 6b40d8d56a2ed543b85b5ca735fd3e84 339 SUPERFAMILY SSF52518 4 205 7.5E-64 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_10670 b81fe2c0a7fc3350eccb932b19aeb565 416 Gene3D G3DSA:3.40.50.1820 2 233 9.4E-57 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_10670 b81fe2c0a7fc3350eccb932b19aeb565 416 Pfam PF01738 Dienelactone hydrolase family 16 232 3.2E-48 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 IX88_10670 b81fe2c0a7fc3350eccb932b19aeb565 416 SUPERFAMILY SSF53474 2 233 4.52E-43 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_10670 b81fe2c0a7fc3350eccb932b19aeb565 416 Gene3D G3DSA:3.10.450.50 240 378 3.5E-21 T 11-10-2018 IX88_10670 b81fe2c0a7fc3350eccb932b19aeb565 416 SUPERFAMILY SSF54427 239 383 7.02E-23 T 11-10-2018 IPR032710 NTF2-like domain superfamily IX88_01840 e65ee9b4d3a502ee65ca1830e23b61d4 409 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 13 217 6.5E-60 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain IX88_01840 e65ee9b4d3a502ee65ca1830e23b61d4 409 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 264 379 4.0E-30 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal IX88_01840 e65ee9b4d3a502ee65ca1830e23b61d4 409 SUPERFAMILY SSF52540 10 327 6.48E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_01840 e65ee9b4d3a502ee65ca1830e23b61d4 409 SMART SM00833 264 379 9.8E-52 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal IX88_01840 e65ee9b4d3a502ee65ca1830e23b61d4 409 Gene3D G3DSA:3.40.50.300 10 237 9.3E-74 T 11-10-2018 IX88_11380 df7dff19466c37653c39589904a58685 577 Gene3D G3DSA:3.50.30.80 378 532 5.3E-47 T 11-10-2018 IX88_11380 df7dff19466c37653c39589904a58685 577 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 123 133 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 IX88_11380 df7dff19466c37653c39589904a58685 577 SUPERFAMILY SSF52016 378 564 1.26E-55 T 11-10-2018 IX88_11380 df7dff19466c37653c39589904a58685 577 Pfam PF00920 Dehydratase family 40 559 6.9E-176 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 IX88_11380 df7dff19466c37653c39589904a58685 577 SUPERFAMILY SSF143975 6 377 3.14E-123 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 IX88_07045 626329dc9ab67fb6b1925f875d3f079a 441 Gene3D G3DSA:3.30.465.10 350 429 8.8E-31 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 IX88_07045 626329dc9ab67fb6b1925f875d3f079a 441 SUPERFAMILY SSF54631 201 336 5.66E-23 T 11-10-2018 IX88_07045 626329dc9ab67fb6b1925f875d3f079a 441 Pfam PF03471 Transporter associated domain 350 427 8.5E-22 T 11-10-2018 IPR005170 Transporter-associated domain IX88_07045 626329dc9ab67fb6b1925f875d3f079a 441 SMART SM01091 349 429 6.4E-30 T 11-10-2018 IPR005170 Transporter-associated domain IX88_07045 626329dc9ab67fb6b1925f875d3f079a 441 SUPERFAMILY SSF56176 347 431 2.73E-23 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 IX88_07045 626329dc9ab67fb6b1925f875d3f079a 441 Pfam PF01595 Domain of unknown function DUF21 8 199 3.4E-38 T 11-10-2018 IPR002550 CNNM, transmembrane domain IX88_07045 626329dc9ab67fb6b1925f875d3f079a 441 Gene3D G3DSA:3.10.580.10 195 349 3.2E-34 T 11-10-2018 IX88_07045 626329dc9ab67fb6b1925f875d3f079a 441 Pfam PF00571 CBS domain 288 331 4.9E-5 T 11-10-2018 IPR000644 CBS domain IX88_11310 4f5592af487ff2d73cb5acb295783707 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.5E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_11310 4f5592af487ff2d73cb5acb295783707 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.5E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_11310 4f5592af487ff2d73cb5acb295783707 189 Gene3D G3DSA:1.10.357.10 1 189 6.7E-61 T 11-10-2018 IX88_11310 4f5592af487ff2d73cb5acb295783707 189 SUPERFAMILY SSF46689 3 78 8.48E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_11310 4f5592af487ff2d73cb5acb295783707 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 2.9E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_11310 4f5592af487ff2d73cb5acb295783707 189 SUPERFAMILY SSF48498 84 187 9.9E-5 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_16580 132fa03f96be73daadf3cf7db04fe4e7 216 Pfam PF01728 FtsJ-like methyltransferase 35 210 3.2E-58 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 IX88_16580 132fa03f96be73daadf3cf7db04fe4e7 216 PIRSF PIRSF005461 3 216 2.1E-80 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 IX88_16580 132fa03f96be73daadf3cf7db04fe4e7 216 SUPERFAMILY SSF53335 34 212 3.08E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_16580 132fa03f96be73daadf3cf7db04fe4e7 216 Gene3D G3DSA:3.40.50.150 31 215 8.3E-61 T 11-10-2018 IX88_16580 132fa03f96be73daadf3cf7db04fe4e7 216 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 19 212 30.905 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 IX88_04540 174f4aecd6a65137d5d00e493258875d 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 7.8E-28 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_04540 174f4aecd6a65137d5d00e493258875d 78 Pfam PF00830 Ribosomal L28 family 3 61 1.0E-26 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_04540 174f4aecd6a65137d5d00e493258875d 78 SUPERFAMILY SSF143800 2 77 5.3E-30 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_04540 174f4aecd6a65137d5d00e493258875d 78 Gene3D G3DSA:2.30.170.40 2 78 6.1E-33 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_04540 174f4aecd6a65137d5d00e493258875d 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.279 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_18215 4bd12ba7aea8918a5adcd62773892d92 188 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 29 177 3.0E-46 T 11-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria IX88_18215 4bd12ba7aea8918a5adcd62773892d92 188 Gene3D G3DSA:1.20.1540.10 6 181 1.0E-15 T 11-10-2018 IPR035952 Rhomboid-like superfamily IX88_18215 4bd12ba7aea8918a5adcd62773892d92 188 Pfam PF01694 Rhomboid family 39 181 3.3E-13 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 IX88_18215 4bd12ba7aea8918a5adcd62773892d92 188 SUPERFAMILY SSF144091 11 186 1.31E-23 T 11-10-2018 IX88_00005 4bd12ba7aea8918a5adcd62773892d92 188 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 29 177 3.0E-46 T 11-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria IX88_00005 4bd12ba7aea8918a5adcd62773892d92 188 Gene3D G3DSA:1.20.1540.10 6 181 1.0E-15 T 11-10-2018 IPR035952 Rhomboid-like superfamily IX88_00005 4bd12ba7aea8918a5adcd62773892d92 188 Pfam PF01694 Rhomboid family 39 181 3.3E-13 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 IX88_00005 4bd12ba7aea8918a5adcd62773892d92 188 SUPERFAMILY SSF144091 11 186 1.31E-23 T 11-10-2018 IX88_17760 71cd27d3b0d96e207dc6d2ba607c5dce 320 SUPERFAMILY SSF82866 114 300 4.05E-39 T 11-10-2018 IX88_17760 71cd27d3b0d96e207dc6d2ba607c5dce 320 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 49 292 4.4E-76 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 IX88_17760 71cd27d3b0d96e207dc6d2ba607c5dce 320 Pfam PF02355 Protein export membrane protein 124 299 1.1E-61 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial IX88_17760 71cd27d3b0d96e207dc6d2ba607c5dce 320 PRINTS PR01755 Bacterial translocase SecF protein signature 209 227 1.2E-26 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IX88_17760 71cd27d3b0d96e207dc6d2ba607c5dce 320 PRINTS PR01755 Bacterial translocase SecF protein signature 161 175 1.2E-26 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IX88_17760 71cd27d3b0d96e207dc6d2ba607c5dce 320 PRINTS PR01755 Bacterial translocase SecF protein signature 48 63 1.2E-26 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IX88_17760 71cd27d3b0d96e207dc6d2ba607c5dce 320 PRINTS PR01755 Bacterial translocase SecF protein signature 241 256 1.2E-26 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IX88_17760 71cd27d3b0d96e207dc6d2ba607c5dce 320 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 110 290 2.9E-47 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IX88_17760 71cd27d3b0d96e207dc6d2ba607c5dce 320 Pfam PF07549 SecD/SecF GG Motif 43 70 7.1E-10 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site IX88_17760 71cd27d3b0d96e207dc6d2ba607c5dce 320 Gene3D G3DSA:1.20.1640.10 109 303 1.8E-12 T 11-10-2018 IX88_17760 71cd27d3b0d96e207dc6d2ba607c5dce 320 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 21 303 26.793 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 IX88_01940 9dc94c69d073c05fd9ba2a9026166a5a 52 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 3.1E-10 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 IX88_01940 9dc94c69d073c05fd9ba2a9026166a5a 52 PIRSF PIRSF036466 1 52 4.8E-19 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 IX88_01940 9dc94c69d073c05fd9ba2a9026166a5a 52 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 51 17.701 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 IX88_12960 52242038aa34e047aa3f30f4e067a5c7 185 PIRSF PIRSF026640 5 185 3.5E-49 T 11-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 IX88_12960 52242038aa34e047aa3f30f4e067a5c7 185 SUPERFAMILY SSF48600 37 182 2.33E-33 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 IX88_12960 52242038aa34e047aa3f30f4e067a5c7 185 SMART SM00830 34 105 2.5E-9 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 IX88_12960 52242038aa34e047aa3f30f4e067a5c7 185 Pfam PF01817 Chorismate mutase type II 36 103 1.3E-8 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 IX88_12960 52242038aa34e047aa3f30f4e067a5c7 185 Gene3D G3DSA:1.20.140.170 30 184 9.2E-57 T 11-10-2018 IX88_12960 52242038aa34e047aa3f30f4e067a5c7 185 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 28 140 3.8E-38 T 11-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 IX88_06480 ac3f1335327df78c33cbe499e7ada0c7 422 SUPERFAMILY SSF56300 9 355 8.26E-52 T 11-10-2018 IX88_06480 ac3f1335327df78c33cbe499e7ada0c7 422 Pfam PF00149 Calcineurin-like phosphoesterase 8 238 4.5E-16 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 IX88_06480 ac3f1335327df78c33cbe499e7ada0c7 422 Gene3D G3DSA:3.60.21.10 2 289 3.5E-75 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like IX88_06480 ac3f1335327df78c33cbe499e7ada0c7 422 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 293 393 3.3E-9 T 11-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain IX88_06480 ac3f1335327df78c33cbe499e7ada0c7 422 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 9 264 3.0E-55 T 11-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 IX88_09960 32552df549c829cdc0553122e133d803 607 SUPERFAMILY SSF53850 35 599 1.81E-87 T 11-10-2018 IX88_09960 32552df549c829cdc0553122e133d803 607 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 517 9.7E-64 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain IX88_09960 32552df549c829cdc0553122e133d803 607 PIRSF PIRSF002741 4 598 2.9E-55 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 IX88_09960 32552df549c829cdc0553122e133d803 607 Gene3D G3DSA:3.90.76.10 54 234 1.3E-90 T 11-10-2018 IX88_09960 32552df549c829cdc0553122e133d803 607 Gene3D G3DSA:3.10.105.10 346 575 1.3E-90 T 11-10-2018 IX88_09960 32552df549c829cdc0553122e133d803 607 Gene3D G3DSA:3.40.190.10 235 587 1.3E-90 T 11-10-2018 IX88_14300 78d6d15f63d6722b5e06906a63b37e0b 191 PIRSF PIRSF000232 5 191 1.2E-63 T 11-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like IX88_14300 78d6d15f63d6722b5e06906a63b37e0b 191 Gene3D G3DSA:3.40.109.10 9 188 7.1E-36 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IX88_14300 78d6d15f63d6722b5e06906a63b37e0b 191 Pfam PF00881 Nitroreductase family 13 168 4.7E-23 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 IX88_14300 78d6d15f63d6722b5e06906a63b37e0b 191 SUPERFAMILY SSF55469 11 187 4.58E-30 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IX88_04635 021c7b6fb2a3d9006876b48da259b75b 72 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 9.3E-19 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 IX88_04635 021c7b6fb2a3d9006876b48da259b75b 72 Pfam PF02416 mttA/Hcf106 family 4 49 4.2E-13 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 IX88_04635 021c7b6fb2a3d9006876b48da259b75b 72 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 71 20.38 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 IX88_08440 c2856143de9284f51cd7d7eba32de3b0 316 SUPERFAMILY SSF51735 3 188 1.67E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_08440 c2856143de9284f51cd7d7eba32de3b0 316 Gene3D G3DSA:3.40.50.720 4 191 1.1E-52 T 11-10-2018 IX88_08440 c2856143de9284f51cd7d7eba32de3b0 316 SUPERFAMILY SSF48179 191 268 6.97E-12 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_08440 c2856143de9284f51cd7d7eba32de3b0 316 PIRSF PIRSF000105 1 315 1.4E-62 T 11-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 IX88_08440 c2856143de9284f51cd7d7eba32de3b0 316 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 187 2.8E-46 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 IX88_08440 c2856143de9284f51cd7d7eba32de3b0 316 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 191 246 1.1E-10 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 IX88_08440 c2856143de9284f51cd7d7eba32de3b0 316 Gene3D G3DSA:1.10.1040.10 192 315 3.3E-32 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 IX88_09245 7be956cc33f2409546d4d8d21c446859 173 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 18 32 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 IX88_09245 7be956cc33f2409546d4d8d21c446859 173 Pfam PF02417 Chromate transporter 7 169 1.1E-32 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 IX88_17800 747f653e2fb82a23d4b7ddc57066cfb1 623 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 120 242 1.2E-36 T 11-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 IX88_17800 747f653e2fb82a23d4b7ddc57066cfb1 623 Gene3D G3DSA:3.40.50.150 10 250 4.6E-87 T 11-10-2018 IX88_17800 747f653e2fb82a23d4b7ddc57066cfb1 623 Pfam PF01266 FAD dependent oxidoreductase 267 586 2.4E-26 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 IX88_17800 747f653e2fb82a23d4b7ddc57066cfb1 623 SUPERFAMILY SSF54373 457 540 4.97E-6 T 11-10-2018 IX88_17800 747f653e2fb82a23d4b7ddc57066cfb1 623 Gene3D G3DSA:3.30.9.10 344 548 5.4E-81 T 11-10-2018 IX88_17800 747f653e2fb82a23d4b7ddc57066cfb1 623 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 8 612 21.886 T 11-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 IX88_17800 747f653e2fb82a23d4b7ddc57066cfb1 623 SUPERFAMILY SSF51971 264 592 1.77E-25 T 11-10-2018 IX88_17800 747f653e2fb82a23d4b7ddc57066cfb1 623 Gene3D G3DSA:3.50.50.60 267 610 5.4E-81 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_17800 747f653e2fb82a23d4b7ddc57066cfb1 623 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 564 3.3E-62 T 11-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 IX88_16640 d1dc2026a25f98841186df798a6bd400 551 SUPERFAMILY SSF48208 172 411 1.74E-15 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 IX88_16640 d1dc2026a25f98841186df798a6bd400 551 Gene3D G3DSA:1.50.10.10 187 431 7.7E-7 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 IX88_02425 e77bbcb8498e3a0cff50329973af9f06 333 Pfam PF01687 Riboflavin kinase 180 323 1.1E-26 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 IX88_02425 e77bbcb8498e3a0cff50329973af9f06 333 Gene3D G3DSA:3.40.50.620 6 181 9.9E-59 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_02425 e77bbcb8498e3a0cff50329973af9f06 333 Pfam PF06574 FAD synthetase 16 163 2.3E-49 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 IX88_02425 e77bbcb8498e3a0cff50329973af9f06 333 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 324 7.0E-73 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 IX88_02425 e77bbcb8498e3a0cff50329973af9f06 333 SUPERFAMILY SSF52374 18 172 7.88E-32 T 11-10-2018 IX88_02425 e77bbcb8498e3a0cff50329973af9f06 333 SMART SM00904 179 326 1.3E-42 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 IX88_02425 e77bbcb8498e3a0cff50329973af9f06 333 PIRSF PIRSF004491 2 333 6.7E-108 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 IX88_02425 e77bbcb8498e3a0cff50329973af9f06 333 SUPERFAMILY SSF82114 171 328 3.71E-33 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 IX88_02425 e77bbcb8498e3a0cff50329973af9f06 333 Gene3D G3DSA:2.40.30.30 182 332 3.9E-26 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 SUPERFAMILY SSF88946 117 460 1.13E-93 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 Pfam PF00140 Sigma-70 factor, region 1.2 100 130 2.2E-12 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 6 626 44.43 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 Pfam PF04545 Sigma-70, region 4 561 614 5.4E-18 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 Gene3D G3DSA:1.10.220.120 5 66 7.7E-26 T 11-10-2018 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 Pfam PF04542 Sigma-70 region 2 393 462 1.8E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 Pfam PF04539 Sigma-70 region 3 472 547 1.0E-30 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 389 625 2.7E-122 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 PRINTS PR00046 Major sigma-70 factor signature 601 612 5.0E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 PRINTS PR00046 Major sigma-70 factor signature 565 577 5.0E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 PRINTS PR00046 Major sigma-70 factor signature 441 449 5.0E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 PRINTS PR00046 Major sigma-70 factor signature 586 601 5.0E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 PRINTS PR00046 Major sigma-70 factor signature 417 430 5.0E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 586 612 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 Pfam PF04546 Sigma-70, non-essential region 141 362 2.3E-53 T 11-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 417 430 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 Pfam PF03979 Sigma-70 factor, region 1.1 8 83 5.4E-27 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 389 614 8.9E-38 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 SUPERFAMILY SSF88659 523 625 5.61E-27 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like IX88_16750 1dd20e9e55e113189dbd1de854128306 628 Gene3D G3DSA:1.10.10.10 466 542 7.9E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_16750 1dd20e9e55e113189dbd1de854128306 628 SUPERFAMILY SSF88659 466 539 1.57E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like IX88_16750 1dd20e9e55e113189dbd1de854128306 628 Gene3D G3DSA:1.10.601.10 115 462 1.4E-131 T 11-10-2018 IX88_16750 1dd20e9e55e113189dbd1de854128306 628 Gene3D G3DSA:1.10.10.10 543 627 4.3E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_15565 fcc1b858d185b1a6da3fb14509bad7eb 293 Gene3D G3DSA:1.10.10.10 1 80 4.2E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_15565 fcc1b858d185b1a6da3fb14509bad7eb 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 60 2.6E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_15565 fcc1b858d185b1a6da3fb14509bad7eb 293 Pfam PF03466 LysR substrate binding domain 88 286 3.4E-34 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_15565 fcc1b858d185b1a6da3fb14509bad7eb 293 SUPERFAMILY SSF53850 88 288 9.72E-36 T 11-10-2018 IX88_15565 fcc1b858d185b1a6da3fb14509bad7eb 293 Gene3D G3DSA:3.40.190.290 91 291 2.2E-32 T 11-10-2018 IX88_15565 fcc1b858d185b1a6da3fb14509bad7eb 293 SUPERFAMILY SSF46785 3 110 9.59E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_03275 44d2fecae414a0ebd93dfb3e4dbf708b 559 Pfam PF00501 AMP-binding enzyme 31 466 2.9E-110 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IX88_03275 44d2fecae414a0ebd93dfb3e4dbf708b 559 Gene3D G3DSA:3.30.300.310 463 559 2.3E-32 T 11-10-2018 IX88_03275 44d2fecae414a0ebd93dfb3e4dbf708b 559 Pfam PF13193 AMP-binding enzyme C-terminal domain 475 549 3.1E-18 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IX88_03275 44d2fecae414a0ebd93dfb3e4dbf708b 559 SUPERFAMILY SSF56801 20 558 6.28E-152 T 11-10-2018 IX88_03275 44d2fecae414a0ebd93dfb3e4dbf708b 559 Gene3D G3DSA:3.40.50.12780 13 462 4.7E-116 T 11-10-2018 IX88_03275 44d2fecae414a0ebd93dfb3e4dbf708b 559 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 11-10-2018 IPR020845 AMP-binding, conserved site IX88_06510 14489558ea32e18dc9d488488011dda4 337 SUPERFAMILY SSF51569 6 335 4.15E-134 T 11-10-2018 IX88_06510 14489558ea32e18dc9d488488011dda4 337 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 331 5.8E-132 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IX88_06510 14489558ea32e18dc9d488488011dda4 337 Gene3D G3DSA:3.20.20.70 2 337 2.0E-140 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_06510 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 1.7E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IX88_06510 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.7E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IX88_06510 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 1.7E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IX88_06510 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 1.7E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IX88_06510 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 1.7E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IX88_06510 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 1.7E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IX88_06510 14489558ea32e18dc9d488488011dda4 337 PIRSF PIRSF001415 2 336 6.1E-140 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IX88_06510 14489558ea32e18dc9d488488011dda4 337 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IX88_06510 14489558ea32e18dc9d488488011dda4 337 SMART SM01004 10 333 4.6E-223 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 IX88_07050 9f359f55b17b2b029154fe097fadd073 329 SUPERFAMILY SSF46785 2 83 4.69E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_07050 9f359f55b17b2b029154fe097fadd073 329 Pfam PF03466 LysR substrate binding domain 97 304 8.2E-17 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_07050 9f359f55b17b2b029154fe097fadd073 329 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 5.9E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_07050 9f359f55b17b2b029154fe097fadd073 329 Gene3D G3DSA:3.40.190.10 170 279 4.9E-61 T 11-10-2018 IX88_07050 9f359f55b17b2b029154fe097fadd073 329 Gene3D G3DSA:1.10.10.10 1 86 3.8E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_07050 9f359f55b17b2b029154fe097fadd073 329 Gene3D G3DSA:3.40.190.10 92 303 4.9E-61 T 11-10-2018 IX88_07050 9f359f55b17b2b029154fe097fadd073 329 SUPERFAMILY SSF53850 90 305 9.96E-37 T 11-10-2018 IX88_07050 9f359f55b17b2b029154fe097fadd073 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_07050 9f359f55b17b2b029154fe097fadd073 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_07050 9f359f55b17b2b029154fe097fadd073 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_07385 ce3132528fb4e06b2f7ad03c39153e34 676 Gene3D G3DSA:3.20.20.70 3 369 9.1E-124 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_07385 ce3132528fb4e06b2f7ad03c39153e34 676 SUPERFAMILY SSF51971 334 518 2.0E-40 T 11-10-2018 IX88_07385 ce3132528fb4e06b2f7ad03c39153e34 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 2.5E-12 T 11-10-2018 IX88_07385 ce3132528fb4e06b2f7ad03c39153e34 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 499 517 2.5E-12 T 11-10-2018 IX88_07385 ce3132528fb4e06b2f7ad03c39153e34 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 460 478 2.5E-12 T 11-10-2018 IX88_07385 ce3132528fb4e06b2f7ad03c39153e34 676 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 376 638 1.4E-25 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_07385 ce3132528fb4e06b2f7ad03c39153e34 676 SUPERFAMILY SSF51905 470 630 1.02E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07385 ce3132528fb4e06b2f7ad03c39153e34 676 Gene3D G3DSA:3.40.50.720 376 669 6.6E-108 T 11-10-2018 IX88_07385 ce3132528fb4e06b2f7ad03c39153e34 676 Gene3D G3DSA:3.50.50.60 472 628 6.6E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07385 ce3132528fb4e06b2f7ad03c39153e34 676 SUPERFAMILY SSF51395 2 368 3.4E-109 T 11-10-2018 IX88_07385 ce3132528fb4e06b2f7ad03c39153e34 676 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 331 1.0E-77 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 IX88_02240 88433eeaa5c35f252a41d3bbdfc9e63e 232 SUPERFAMILY SSF54423 31 82 1.61E-12 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 IX88_02240 88433eeaa5c35f252a41d3bbdfc9e63e 232 Pfam PF13098 Thioredoxin-like domain 107 226 1.7E-29 T 11-10-2018 IPR012336 Thioredoxin-like fold IX88_02240 88433eeaa5c35f252a41d3bbdfc9e63e 232 Gene3D G3DSA:3.10.450.70 20 82 5.8E-10 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 IX88_02240 88433eeaa5c35f252a41d3bbdfc9e63e 232 ProSitePatterns PS00194 Thioredoxin family active site. 115 133 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 IX88_02240 88433eeaa5c35f252a41d3bbdfc9e63e 232 Gene3D G3DSA:3.40.30.10 99 230 1.6E-35 T 11-10-2018 IX88_02240 88433eeaa5c35f252a41d3bbdfc9e63e 232 Pfam PF10411 Disulfide bond isomerase protein N-terminus 26 78 9.2E-15 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal IX88_02240 88433eeaa5c35f252a41d3bbdfc9e63e 232 SUPERFAMILY SSF52833 92 226 9.9E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_16785 9d9d69256ee694913b2d7d6f90c4bb25 126 Pfam PF01638 HxlR-like helix-turn-helix 23 110 2.6E-23 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type IX88_16785 9d9d69256ee694913b2d7d6f90c4bb25 126 SUPERFAMILY SSF46785 8 124 3.88E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_16785 9d9d69256ee694913b2d7d6f90c4bb25 126 Gene3D G3DSA:1.10.10.10 1 121 1.4E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_04130 41cdd42276bc98d00ed739325daef55e 613 SUPERFAMILY SSF51735 398 527 8.0E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_04130 41cdd42276bc98d00ed739325daef55e 613 Pfam PF02254 TrkA-N domain 400 512 1.6E-23 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 IX88_04130 41cdd42276bc98d00ed739325daef55e 613 Pfam PF00999 Sodium/hydrogen exchanger family 9 369 2.8E-68 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 IX88_04130 41cdd42276bc98d00ed739325daef55e 613 Gene3D G3DSA:1.20.1530.20 1 377 4.6E-85 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily IX88_04130 41cdd42276bc98d00ed739325daef55e 613 Gene3D G3DSA:3.40.50.720 395 559 8.0E-35 T 11-10-2018 IX88_04130 41cdd42276bc98d00ed739325daef55e 613 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 279 1.5E-78 T 11-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 IX88_06755 0ef777e596521769581a8cf1f745ea05 309 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 153 266 7.1E-12 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IX88_06755 0ef777e596521769581a8cf1f745ea05 309 Gene3D G3DSA:3.10.180.10 147 291 3.0E-31 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IX88_06755 0ef777e596521769581a8cf1f745ea05 309 SUPERFAMILY SSF54593 1 281 1.37E-30 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IX88_04035 1e8352ee1baed4aa514214389094d282 257 Gene3D G3DSA:1.10.287.1080 145 245 6.7E-25 T 11-10-2018 IX88_04035 1e8352ee1baed4aa514214389094d282 257 SUPERFAMILY SSF141734 4 120 1.18E-48 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 IX88_04035 1e8352ee1baed4aa514214389094d282 257 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 146 239 18.775 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 IX88_04035 1e8352ee1baed4aa514214389094d282 257 SUPERFAMILY SSF101386 147 243 6.76E-20 T 11-10-2018 IX88_04035 1e8352ee1baed4aa514214389094d282 257 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 55 109 7.0E-27 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 IX88_04035 1e8352ee1baed4aa514214389094d282 257 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 6 110 31.876 T 11-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 IX88_04035 1e8352ee1baed4aa514214389094d282 257 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 244 33.748 T 11-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 IX88_04035 1e8352ee1baed4aa514214389094d282 257 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 149 239 2.4E-24 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 IX88_04035 1e8352ee1baed4aa514214389094d282 257 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 152 242 4.1E-11 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 IX88_04035 1e8352ee1baed4aa514214389094d282 257 Gene3D G3DSA:3.10.20.400 2 97 1.8E-38 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 IX88_04035 1e8352ee1baed4aa514214389094d282 257 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 32 106 4.6E-34 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 IX88_10350 149a8f02578939de2db7ab13b417028e 255 SUPERFAMILY SSF53335 31 250 1.88E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_10350 149a8f02578939de2db7ab13b417028e 255 Gene3D G3DSA:3.40.50.150 23 247 4.6E-55 T 11-10-2018 IX88_10350 149a8f02578939de2db7ab13b417028e 255 Pfam PF08241 Methyltransferase domain 47 143 5.6E-24 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 IX88_12345 a6713681ea2a23f4ee60c6b829a8a864 181 Pfam PF05838 Glycosyl hydrolase 108 8 90 1.1E-23 T 11-10-2018 IPR008565 Protein of unknown function DUF847 IX88_12345 a6713681ea2a23f4ee60c6b829a8a864 181 Gene3D G3DSA:1.20.141.10 2 180 9.4E-42 T 11-10-2018 IX88_12345 a6713681ea2a23f4ee60c6b829a8a864 181 Pfam PF09374 Predicted Peptidoglycan domain 97 179 3.5E-16 T 11-10-2018 IPR018537 Peptidoglycan binding domain IX88_12345 a6713681ea2a23f4ee60c6b829a8a864 181 SUPERFAMILY SSF53955 1 179 2.33E-45 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily IX88_12265 b24095cc8dce95bc033a1784a66c928b 336 SUPERFAMILY SSF53850 8 262 2.02E-15 T 11-10-2018 IX88_12265 b24095cc8dce95bc033a1784a66c928b 336 Gene3D G3DSA:3.40.190.10 95 210 8.2E-77 T 11-10-2018 IX88_12265 b24095cc8dce95bc033a1784a66c928b 336 Gene3D G3DSA:3.40.190.10 11 334 8.2E-77 T 11-10-2018 IX88_12265 b24095cc8dce95bc033a1784a66c928b 336 Pfam PF13379 NMT1-like family 3 248 1.2E-53 T 11-10-2018 IX88_07850 70c264bade33f93bc16fedfadadfdd00 297 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 69 85 - T 11-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 IX88_07850 70c264bade33f93bc16fedfadadfdd00 297 SUPERFAMILY SSF53474 36 293 6.01E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_07850 70c264bade33f93bc16fedfadadfdd00 297 Pfam PF07859 alpha/beta hydrolase fold 69 270 2.4E-55 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 IX88_07850 70c264bade33f93bc16fedfadadfdd00 297 Gene3D G3DSA:3.40.50.1820 7 296 2.8E-78 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_02560 dfa08bb9a833ef2b550731a59ea014c5 513 PRINTS PR01806 Virulence factor MviN signature 157 178 1.1E-69 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IX88_02560 dfa08bb9a833ef2b550731a59ea014c5 513 PRINTS PR01806 Virulence factor MviN signature 52 68 1.1E-69 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IX88_02560 dfa08bb9a833ef2b550731a59ea014c5 513 PRINTS PR01806 Virulence factor MviN signature 133 157 1.1E-69 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IX88_02560 dfa08bb9a833ef2b550731a59ea014c5 513 PRINTS PR01806 Virulence factor MviN signature 416 433 1.1E-69 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IX88_02560 dfa08bb9a833ef2b550731a59ea014c5 513 PRINTS PR01806 Virulence factor MviN signature 357 376 1.1E-69 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IX88_02560 dfa08bb9a833ef2b550731a59ea014c5 513 PRINTS PR01806 Virulence factor MviN signature 33 52 1.1E-69 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IX88_02560 dfa08bb9a833ef2b550731a59ea014c5 513 PRINTS PR01806 Virulence factor MviN signature 259 285 1.1E-69 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IX88_02560 dfa08bb9a833ef2b550731a59ea014c5 513 PIRSF PIRSF002869 1 512 1.6E-155 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IX88_02560 dfa08bb9a833ef2b550731a59ea014c5 513 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 503 9.9E-132 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IX88_02560 dfa08bb9a833ef2b550731a59ea014c5 513 Pfam PF03023 MviN-like protein 30 472 5.0E-130 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IX88_02560 dfa08bb9a833ef2b550731a59ea014c5 513 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 474 19.676 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ IX88_07730 b59de4644a8ef9630964fe4ebdcea473 356 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 335 351 2.4E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_07730 b59de4644a8ef9630964fe4ebdcea473 356 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 320 335 2.4E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_07730 b59de4644a8ef9630964fe4ebdcea473 356 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 42 224 2.5E-30 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal IX88_07730 b59de4644a8ef9630964fe4ebdcea473 356 SUPERFAMILY SSF46689 305 353 1.25E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_07730 b59de4644a8ef9630964fe4ebdcea473 356 Gene3D G3DSA:1.10.10.60 252 354 2.2E-22 T 11-10-2018 IX88_07730 b59de4644a8ef9630964fe4ebdcea473 356 Pfam PF12833 Helix-turn-helix domain 275 351 4.6E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_07730 b59de4644a8ef9630964fe4ebdcea473 356 SMART SM00342 269 351 6.2E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_12630 04c841bdfbf9355cfae223fbce35aa9d 118 SUPERFAMILY SSF47413 9 89 1.39E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IX88_16450 471ea167f83ccd16138fbb7418f577a7 301 Gene3D G3DSA:3.30.2010.10 74 165 5.0E-34 T 11-10-2018 IX88_16450 471ea167f83ccd16138fbb7418f577a7 301 Pfam PF01435 Peptidase family M48 81 297 2.1E-40 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 IX88_16450 471ea167f83ccd16138fbb7418f577a7 301 Hamap MF_00188 Protease HtpX [htpX]. 1 298 25.605 T 11-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 IX88_05000 742a8b051871d6b983f6b449c8b1976a 328 Pfam PF01207 Dihydrouridine synthase (Dus) 7 303 1.9E-87 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 IX88_05000 742a8b051871d6b983f6b449c8b1976a 328 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 86 104 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 IX88_05000 742a8b051871d6b983f6b449c8b1976a 328 Gene3D G3DSA:3.20.20.70 1 241 1.1E-71 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_05000 742a8b051871d6b983f6b449c8b1976a 328 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 4 310 2.9E-141 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 IX88_05000 742a8b051871d6b983f6b449c8b1976a 328 Gene3D G3DSA:1.20.120.1460 244 317 4.6E-18 T 11-10-2018 IX88_05000 742a8b051871d6b983f6b449c8b1976a 328 SUPERFAMILY SSF51395 3 310 1.43E-69 T 11-10-2018 IX88_05000 742a8b051871d6b983f6b449c8b1976a 328 PIRSF PIRSF006621 1 324 1.8E-74 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 IX88_05000 742a8b051871d6b983f6b449c8b1976a 328 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 321 48.108 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 IX88_04075 0ae47a200ee8992dc83c2e2075b474cd 1211 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 2 1211 14.388 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 IX88_04075 0ae47a200ee8992dc83c2e2075b474cd 1211 SUPERFAMILY SSF52980 897 1208 1.61E-45 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 IX88_04075 0ae47a200ee8992dc83c2e2075b474cd 1211 Gene3D G3DSA:3.40.50.10930 2 108 6.0E-11 T 11-10-2018 IX88_04075 0ae47a200ee8992dc83c2e2075b474cd 1211 Gene3D G3DSA:3.40.50.10930 200 387 7.5E-34 T 11-10-2018 IX88_04075 0ae47a200ee8992dc83c2e2075b474cd 1211 SUPERFAMILY SSF52540 416 886 2.2E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04075 0ae47a200ee8992dc83c2e2075b474cd 1211 Gene3D G3DSA:1.10.486.10 510 730 9.6E-115 T 11-10-2018 IX88_04075 0ae47a200ee8992dc83c2e2075b474cd 1211 Gene3D G3DSA:3.40.50.300 396 878 9.6E-115 T 11-10-2018 IX88_04075 0ae47a200ee8992dc83c2e2075b474cd 1211 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 3 877 1.2E-192 T 11-10-2018 IX88_04075 0ae47a200ee8992dc83c2e2075b474cd 1211 PIRSF PIRSF000980 2 1198 1.3E-156 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 IX88_04075 0ae47a200ee8992dc83c2e2075b474cd 1211 SUPERFAMILY SSF52540 3 407 2.39E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04915 8ed8788e9c0149205ea8efd91017e3c1 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 3.3E-63 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 IX88_04915 8ed8788e9c0149205ea8efd91017e3c1 163 SUPERFAMILY SSF55021 2 76 4.58E-22 T 11-10-2018 IX88_04915 8ed8788e9c0149205ea8efd91017e3c1 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 3.0E-37 T 11-10-2018 IX88_04915 8ed8788e9c0149205ea8efd91017e3c1 163 SUPERFAMILY SSF55021 79 161 7.75E-27 T 11-10-2018 IX88_04915 8ed8788e9c0149205ea8efd91017e3c1 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 8.9E-28 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 IX88_04915 8ed8788e9c0149205ea8efd91017e3c1 163 Gene3D G3DSA:3.30.70.260 1 78 4.3E-34 T 11-10-2018 IX88_04915 8ed8788e9c0149205ea8efd91017e3c1 163 Pfam PF13710 ACT domain 13 73 5.4E-16 T 11-10-2018 IX88_04915 8ed8788e9c0149205ea8efd91017e3c1 163 Gene3D G3DSA:3.30.70.1150 83 163 9.4E-30 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal IX88_05020 c8d7bc2ff812d517b37f99eeaacd2cb8 312 SUPERFAMILY SSF56672 28 207 7.12E-9 T 11-10-2018 IX88_05020 c8d7bc2ff812d517b37f99eeaacd2cb8 312 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 34 240 7.1E-27 T 11-10-2018 IPR000477 Reverse transcriptase domain IX88_05020 c8d7bc2ff812d517b37f99eeaacd2cb8 312 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 235 241 2.6E-27 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 IX88_05020 c8d7bc2ff812d517b37f99eeaacd2cb8 312 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 74 88 2.6E-27 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 IX88_05020 c8d7bc2ff812d517b37f99eeaacd2cb8 312 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 90 108 2.6E-27 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 IX88_05020 c8d7bc2ff812d517b37f99eeaacd2cb8 312 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 147 160 2.6E-27 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 IX88_05020 c8d7bc2ff812d517b37f99eeaacd2cb8 312 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 29 42 2.6E-27 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 IX88_05020 c8d7bc2ff812d517b37f99eeaacd2cb8 312 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 180 191 2.6E-27 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 IX88_05020 c8d7bc2ff812d517b37f99eeaacd2cb8 312 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 43 55 2.6E-27 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 IX88_05790 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 1.7E-7 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 IX88_05790 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 1.7E-7 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 IX88_05790 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 422 444 1.7E-7 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 IX88_05790 6db93afe43fd61fa9c43061cb698ada0 629 Pfam PF00361 Proton-conducting membrane transporter 134 412 1.0E-83 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05790 6db93afe43fd61fa9c43061cb698ada0 629 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 621 9.8E-201 T 11-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05790 6db93afe43fd61fa9c43061cb698ada0 629 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 1.5E-21 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05790 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 1.6E-51 T 11-10-2018 IX88_05790 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 1.6E-51 T 11-10-2018 IX88_05790 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 423 442 1.6E-51 T 11-10-2018 IX88_05790 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 1.6E-51 T 11-10-2018 IX88_05790 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 1.6E-51 T 11-10-2018 IX88_05790 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 1.6E-51 T 11-10-2018 IX88_05790 6db93afe43fd61fa9c43061cb698ada0 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 1.6E-51 T 11-10-2018 IX88_04365 2197a4bdb42c4276247f8e575fe6163f 82 Pfam PF09834 Predicted membrane protein (DUF2061) 16 66 1.0E-17 T 11-10-2018 IPR018638 Domain of unknown function DUF2061, membrane IX88_03310 95420548b4283ec869448a8e237b20ad 258 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 32 210 1.3E-38 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal IX88_03310 95420548b4283ec869448a8e237b20ad 258 SUPERFAMILY SSF53639 23 237 3.53E-63 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily IX88_03310 95420548b4283ec869448a8e237b20ad 258 Gene3D G3DSA:3.40.225.10 21 256 1.5E-53 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily IX88_03310 95420548b4283ec869448a8e237b20ad 258 SMART SM01007 32 210 2.1E-45 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal IX88_06910 538413350eacf0307b1aa0b7df202253 205 Gene3D G3DSA:1.20.1540.10 3 193 2.0E-26 T 11-10-2018 IPR035952 Rhomboid-like superfamily IX88_06910 538413350eacf0307b1aa0b7df202253 205 SUPERFAMILY SSF144091 7 191 2.62E-34 T 11-10-2018 IX88_06910 538413350eacf0307b1aa0b7df202253 205 Pfam PF01694 Rhomboid family 41 189 4.8E-24 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 IX88_04300 0ca04e8660049f2b49e7a2d609e0400d 1110 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 422 2.2E-158 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 IX88_04300 0ca04e8660049f2b49e7a2d609e0400d 1110 SMART SM00316 37 117 8.8E-9 T 11-10-2018 IPR022967 RNA-binding domain, S1 IX88_04300 0ca04e8660049f2b49e7a2d609e0400d 1110 Pfam PF00575 S1 RNA binding domain 36 116 4.4E-10 T 11-10-2018 IPR003029 S1 domain GO:0003676 IX88_04300 0ca04e8660049f2b49e7a2d609e0400d 1110 Hamap MF_00970 Ribonuclease E [rne]. 1 1096 35.482 T 11-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 IX88_04300 0ca04e8660049f2b49e7a2d609e0400d 1110 Gene3D G3DSA:3.40.1260.20 399 504 1.9E-30 T 11-10-2018 IX88_04300 0ca04e8660049f2b49e7a2d609e0400d 1110 Pfam PF10150 Ribonuclease E/G family 119 388 3.4E-94 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 IX88_04300 0ca04e8660049f2b49e7a2d609e0400d 1110 SUPERFAMILY SSF50249 40 123 1.96E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_04300 0ca04e8660049f2b49e7a2d609e0400d 1110 Gene3D G3DSA:2.40.50.140 31 123 2.7E-28 T 11-10-2018 IX88_15960 a9b46ba6b7e7f19740371219a046bfe0 199 Pfam PF01330 RuvA N terminal domain 1 61 3.7E-20 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 IX88_15960 a9b46ba6b7e7f19740371219a046bfe0 199 SUPERFAMILY SSF50249 1 62 1.09E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_15960 a9b46ba6b7e7f19740371219a046bfe0 199 Gene3D G3DSA:1.10.150.20 66 138 3.5E-26 T 11-10-2018 IX88_15960 a9b46ba6b7e7f19740371219a046bfe0 199 SUPERFAMILY SSF46929 152 198 3.66E-9 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily IX88_15960 a9b46ba6b7e7f19740371219a046bfe0 199 Gene3D G3DSA:1.10.8.10 151 198 6.2E-14 T 11-10-2018 IX88_15960 a9b46ba6b7e7f19740371219a046bfe0 199 SUPERFAMILY SSF47781 65 135 6.39E-22 T 11-10-2018 IPR010994 RuvA domain 2-like IX88_15960 a9b46ba6b7e7f19740371219a046bfe0 199 Gene3D G3DSA:2.40.50.140 1 65 1.2E-23 T 11-10-2018 IX88_15960 a9b46ba6b7e7f19740371219a046bfe0 199 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 198 29.911 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 IX88_15960 a9b46ba6b7e7f19740371219a046bfe0 199 SMART SM00278 72 91 0.52 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 IX88_15960 a9b46ba6b7e7f19740371219a046bfe0 199 SMART SM00278 107 126 0.13 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 IX88_15960 a9b46ba6b7e7f19740371219a046bfe0 199 Pfam PF14520 Helix-hairpin-helix domain 71 129 1.1E-18 T 11-10-2018 IX88_15960 a9b46ba6b7e7f19740371219a046bfe0 199 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 198 2.5E-56 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 IX88_15960 a9b46ba6b7e7f19740371219a046bfe0 199 Pfam PF07499 RuvA, C-terminal domain 155 198 1.8E-13 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 IX88_16015 079dae0a4bb684555d022dbde8a604ed 258 Gene3D G3DSA:3.40.1280.10 114 258 6.8E-44 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IX88_16015 079dae0a4bb684555d022dbde8a604ed 258 Pfam PF00588 SpoU rRNA Methylase family 117 250 1.6E-29 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 IX88_16015 079dae0a4bb684555d022dbde8a604ed 258 Gene3D G3DSA:3.30.1330.30 5 105 1.9E-8 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like IX88_16015 079dae0a4bb684555d022dbde8a604ed 258 SUPERFAMILY SSF55315 5 105 3.06E-14 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like IX88_16015 079dae0a4bb684555d022dbde8a604ed 258 SUPERFAMILY SSF75217 116 258 2.35E-35 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases IX88_17685 afc85e883a2c3088ad854ab98ed7a276 325 Gene3D G3DSA:3.40.50.2000 152 302 1.7E-29 T 11-10-2018 IX88_17685 afc85e883a2c3088ad854ab98ed7a276 325 Pfam PF00534 Glycosyl transferases group 1 157 288 6.1E-22 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 IX88_17685 afc85e883a2c3088ad854ab98ed7a276 325 Pfam PF13439 Glycosyltransferase Family 4 13 148 2.4E-15 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 IX88_17685 afc85e883a2c3088ad854ab98ed7a276 325 Gene3D G3DSA:3.40.50.2000 1 151 4.8E-19 T 11-10-2018 IX88_17685 afc85e883a2c3088ad854ab98ed7a276 325 SUPERFAMILY SSF53756 1 325 1.84E-55 T 11-10-2018 IX88_08150 350fa97b1cd4ab81efb633c6b55e2890 319 SUPERFAMILY SSF46785 1 83 3.17E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_08150 350fa97b1cd4ab81efb633c6b55e2890 319 Pfam PF03466 LysR substrate binding domain 89 288 1.3E-35 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_08150 350fa97b1cd4ab81efb633c6b55e2890 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_08150 350fa97b1cd4ab81efb633c6b55e2890 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_08150 350fa97b1cd4ab81efb633c6b55e2890 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_08150 350fa97b1cd4ab81efb633c6b55e2890 319 Gene3D G3DSA:3.40.190.10 162 267 3.9E-76 T 11-10-2018 IX88_08150 350fa97b1cd4ab81efb633c6b55e2890 319 Gene3D G3DSA:3.40.190.10 93 292 3.9E-76 T 11-10-2018 IX88_08150 350fa97b1cd4ab81efb633c6b55e2890 319 Gene3D G3DSA:1.10.10.10 1 91 5.8E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_08150 350fa97b1cd4ab81efb633c6b55e2890 319 SUPERFAMILY SSF53850 89 292 5.34E-32 T 11-10-2018 IX88_08150 350fa97b1cd4ab81efb633c6b55e2890 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.5E-23 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_15415 c99271ed36c438b806ffbea7052db241 320 Gene3D G3DSA:3.90.226.10 61 258 4.0E-40 T 11-10-2018 IX88_15415 c99271ed36c438b806ffbea7052db241 320 Gene3D G3DSA:3.40.1750.20 159 223 4.0E-40 T 11-10-2018 IX88_15415 c99271ed36c438b806ffbea7052db241 320 Pfam PF08496 Peptidase family S49 N-terminal 10 115 3.7E-32 T 11-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 IX88_15415 c99271ed36c438b806ffbea7052db241 320 Pfam PF01343 Peptidase family S49 119 259 1.0E-41 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 IX88_15415 c99271ed36c438b806ffbea7052db241 320 SUPERFAMILY SSF52096 55 256 2.79E-25 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_13730 633b2abe226fac50bf68e674a41501f1 300 Gene3D G3DSA:3.40.50.300 57 196 3.2E-8 T 11-10-2018 IX88_13730 633b2abe226fac50bf68e674a41501f1 300 Pfam PF05673 Protein of unknown function (DUF815) 37 290 8.8E-91 T 11-10-2018 IPR008533 Domain of unknown function DUF815 IX88_13730 633b2abe226fac50bf68e674a41501f1 300 SUPERFAMILY SSF52540 61 261 3.77E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_00180 42477c9a6d9dfa2cc8553fb02acfe6c9 396 PIRSF PIRSF001434 1 396 6.0E-103 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 IX88_00180 42477c9a6d9dfa2cc8553fb02acfe6c9 396 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 394 4.3E-73 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 IX88_00180 42477c9a6d9dfa2cc8553fb02acfe6c9 396 Gene3D G3DSA:3.40.640.10 2 258 7.3E-52 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_00180 42477c9a6d9dfa2cc8553fb02acfe6c9 396 Gene3D G3DSA:3.90.1150.10 261 396 8.0E-31 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_00180 42477c9a6d9dfa2cc8553fb02acfe6c9 396 SUPERFAMILY SSF53383 6 394 5.84E-72 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_14755 6cc5427d8eecb3e27ff195632c194e68 513 SUPERFAMILY SSF103473 329 494 2.88E-13 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_14755 6cc5427d8eecb3e27ff195632c194e68 513 SUPERFAMILY SSF103473 15 313 1.96E-23 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_14755 6cc5427d8eecb3e27ff195632c194e68 513 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 78 102 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 IX88_14755 6cc5427d8eecb3e27ff195632c194e68 513 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 499 3.6E-117 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 IX88_14755 6cc5427d8eecb3e27ff195632c194e68 513 Pfam PF00854 POT family 90 463 1.3E-64 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 IX88_14755 6cc5427d8eecb3e27ff195632c194e68 513 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 154 166 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 IX88_14755 6cc5427d8eecb3e27ff195632c194e68 513 Gene3D G3DSA:1.20.1250.20 4 499 5.8E-142 T 11-10-2018 IX88_05555 910642bf8d4d8e984e6ca4e8d6b4e645 391 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 102 6.8E-11 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 IX88_05555 910642bf8d4d8e984e6ca4e8d6b4e645 391 SUPERFAMILY SSF51735 141 342 7.27E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_05555 910642bf8d4d8e984e6ca4e8d6b4e645 391 Gene3D G3DSA:3.40.50.720 272 324 2.5E-14 T 11-10-2018 IX88_05555 910642bf8d4d8e984e6ca4e8d6b4e645 391 SUPERFAMILY SSF50129 10 174 1.51E-28 T 11-10-2018 IPR011032 GroES-like superfamily IX88_05555 910642bf8d4d8e984e6ca4e8d6b4e645 391 Gene3D G3DSA:3.90.180.10 16 152 8.9E-52 T 11-10-2018 IX88_05555 910642bf8d4d8e984e6ca4e8d6b4e645 391 Gene3D G3DSA:3.40.50.720 153 227 8.9E-52 T 11-10-2018 IX88_05555 910642bf8d4d8e984e6ca4e8d6b4e645 391 Gene3D G3DSA:3.90.180.10 327 366 2.5E-14 T 11-10-2018 IX88_05555 910642bf8d4d8e984e6ca4e8d6b4e645 391 Pfam PF00107 Zinc-binding dehydrogenase 175 340 2.6E-13 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 IX88_07790 fce7506333786e545ad07bf4cb257f1a 379 Gene3D G3DSA:1.10.540.10 3 119 1.7E-32 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_07790 fce7506333786e545ad07bf4cb257f1a 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 IX88_07790 fce7506333786e545ad07bf4cb257f1a 379 SUPERFAMILY SSF56645 4 240 3.27E-78 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_07790 fce7506333786e545ad07bf4cb257f1a 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 216 7.8E-24 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_07790 fce7506333786e545ad07bf4cb257f1a 379 PIRSF PIRSF016578 2 379 2.1E-18 T 11-10-2018 IX88_07790 fce7506333786e545ad07bf4cb257f1a 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 IX88_07790 fce7506333786e545ad07bf4cb257f1a 379 SUPERFAMILY SSF47203 226 378 4.51E-48 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_07790 fce7506333786e545ad07bf4cb257f1a 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 376 6.0E-40 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_07790 fce7506333786e545ad07bf4cb257f1a 379 Gene3D G3DSA:1.20.140.10 234 379 1.5E-42 T 11-10-2018 IX88_07790 fce7506333786e545ad07bf4cb257f1a 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 2.5E-30 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_07790 fce7506333786e545ad07bf4cb257f1a 379 Gene3D G3DSA:2.40.110.10 120 233 6.2E-39 T 11-10-2018 IX88_02820 03d741284b2551ba4cb22acfb7b96eb2 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 289 9.5E-36 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 IX88_02820 03d741284b2551ba4cb22acfb7b96eb2 296 SUPERFAMILY SSF51735 1 161 3.58E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_02820 03d741284b2551ba4cb22acfb7b96eb2 296 SUPERFAMILY SSF48179 162 291 6.23E-39 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_02820 03d741284b2551ba4cb22acfb7b96eb2 296 PIRSF PIRSF000103 1 295 1.7E-77 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 IX88_02820 03d741284b2551ba4cb22acfb7b96eb2 296 Gene3D G3DSA:3.40.50.720 1 163 9.2E-62 T 11-10-2018 IX88_02820 03d741284b2551ba4cb22acfb7b96eb2 296 Gene3D G3DSA:1.10.1040.10 164 294 3.1E-47 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 IX88_02820 03d741284b2551ba4cb22acfb7b96eb2 296 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 5 291 4.1E-121 T 11-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 IX88_02820 03d741284b2551ba4cb22acfb7b96eb2 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 IX88_02820 03d741284b2551ba4cb22acfb7b96eb2 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 3.5E-53 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 IX88_04025 931871a79eb0320c9b4d32e95b9c64ef 460 Pfam PF13476 AAA domain 5 238 1.6E-12 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain IX88_04025 931871a79eb0320c9b4d32e95b9c64ef 460 SUPERFAMILY SSF52540 1 385 5.18E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04025 931871a79eb0320c9b4d32e95b9c64ef 460 Gene3D G3DSA:3.40.50.300 1 385 3.6E-20 T 11-10-2018 IX88_10530 9899f85883b14159f1ff3d05f0df1d49 202 Pfam PF02525 Flavodoxin-like fold 1 199 2.2E-46 T 11-10-2018 IPR003680 Flavodoxin-like fold IX88_10530 9899f85883b14159f1ff3d05f0df1d49 202 SUPERFAMILY SSF52218 1 201 1.07E-51 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_10530 9899f85883b14159f1ff3d05f0df1d49 202 Gene3D G3DSA:3.40.50.360 1 201 7.7E-59 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_10530 9899f85883b14159f1ff3d05f0df1d49 202 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 201 32.311 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 IX88_16775 b71e122641c62342cba1144d81a4133a 466 Pfam PF00324 Amino acid permease 26 391 5.1E-38 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 IX88_16775 b71e122641c62342cba1144d81a4133a 466 Gene3D G3DSA:1.20.1740.10 17 463 3.2E-70 T 11-10-2018 IX88_16775 b71e122641c62342cba1144d81a4133a 466 PIRSF PIRSF006060 8 466 3.9E-63 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_11960 de1881735e12a239f9fbde6c6d54bfda 212 Gene3D G3DSA:3.90.1680.10 1 211 5.8E-47 T 11-10-2018 IPR036590 SOS response associated peptidase-like IX88_11960 de1881735e12a239f9fbde6c6d54bfda 212 Pfam PF02586 SOS response associated peptidase (SRAP) 23 187 8.7E-22 T 11-10-2018 IPR003738 SOS response associated peptidase (SRAP) IX88_11960 de1881735e12a239f9fbde6c6d54bfda 212 SUPERFAMILY SSF143081 22 201 3.92E-44 T 11-10-2018 IPR036590 SOS response associated peptidase-like IX88_07740 6b5d479a2b4693d95b91489791009ef0 515 Pfam PF08666 SAF domain 13 81 1.3E-7 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 IX88_07740 6b5d479a2b4693d95b91489791009ef0 515 SMART SM00858 13 84 2.5E-6 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 IX88_07740 6b5d479a2b4693d95b91489791009ef0 515 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 6 515 3.1E-266 T 11-10-2018 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 IX88_07740 6b5d479a2b4693d95b91489791009ef0 515 Gene3D G3DSA:3.90.1210.30 5 83 3.2E-21 T 11-10-2018 IX88_07740 6b5d479a2b4693d95b91489791009ef0 515 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 111 513 2.8E-141 T 11-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 IX88_01945 ceebf40720a26007f6acfec315daaf70 245 SUPERFAMILY SSF53474 6 244 2.55E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_01945 ceebf40720a26007f6acfec315daaf70 245 Pfam PF01738 Dienelactone hydrolase family 22 242 4.2E-45 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 IX88_01945 ceebf40720a26007f6acfec315daaf70 245 Gene3D G3DSA:3.40.50.1820 1 244 3.9E-60 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_04190 ba87cecd5f00454ee6547f920c6c024e 288 SUPERFAMILY SSF53681 127 267 4.74E-29 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_04190 ba87cecd5f00454ee6547f920c6c024e 288 SUPERFAMILY SSF53681 22 125 1.44E-34 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_04190 ba87cecd5f00454ee6547f920c6c024e 288 Gene3D G3DSA:3.40.50.1860 114 227 4.2E-76 T 11-10-2018 IX88_04190 ba87cecd5f00454ee6547f920c6c024e 288 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 200 210 - T 11-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_04190 ba87cecd5f00454ee6547f920c6c024e 288 TIGRFAM TIGR00067 glut_race: glutamate racemase 23 264 5.1E-65 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_04190 ba87cecd5f00454ee6547f920c6c024e 288 Hamap MF_00258 Glutamate racemase [murI]. 21 276 34.064 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_04190 ba87cecd5f00454ee6547f920c6c024e 288 Pfam PF01177 Asp/Glu/Hydantoin racemase 23 235 1.0E-29 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_04190 ba87cecd5f00454ee6547f920c6c024e 288 Gene3D G3DSA:3.40.50.1860 22 263 4.2E-76 T 11-10-2018 IX88_04190 ba87cecd5f00454ee6547f920c6c024e 288 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 87 95 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_06325 41d046aa40c5e3da0f1bd85667fdc0eb 293 PIRSF PIRSF007580 2 292 4.5E-68 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_06325 41d046aa40c5e3da0f1bd85667fdc0eb 293 Pfam PF10118 Predicted metal-dependent hydrolase 17 279 1.8E-79 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_02865 51716dc2700ff4e9e7feb227feac322a 629 Gene3D G3DSA:3.30.300.30 455 584 7.5E-33 T 11-10-2018 IX88_02865 51716dc2700ff4e9e7feb227feac322a 629 Gene3D G3DSA:3.40.50.12780 1 454 3.3E-135 T 11-10-2018 IX88_02865 51716dc2700ff4e9e7feb227feac322a 629 SUPERFAMILY SSF56801 8 563 4.45E-108 T 11-10-2018 IX88_02865 51716dc2700ff4e9e7feb227feac322a 629 Pfam PF00501 AMP-binding enzyme 14 461 3.1E-83 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IX88_02865 51716dc2700ff4e9e7feb227feac322a 629 ProSitePatterns PS00455 Putative AMP-binding domain signature. 167 178 - T 11-10-2018 IPR020845 AMP-binding, conserved site IX88_00225 3c35fe620c9fac1f51c03238622f8b6d 328 Gene3D G3DSA:3.40.190.170 47 268 2.1E-15 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily IX88_00225 3c35fe620c9fac1f51c03238622f8b6d 328 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 61 196 2.0E-4 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 IX88_00225 3c35fe620c9fac1f51c03238622f8b6d 328 SUPERFAMILY SSF53850 44 249 1.0E-8 T 11-10-2018 IX88_06205 d9d7b0ca470ac81903ce251e101c5270 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 156 1.4E-51 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 IX88_06205 d9d7b0ca470ac81903ce251e101c5270 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 158 69.426 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 IX88_06205 d9d7b0ca470ac81903ce251e101c5270 158 Gene3D G3DSA:2.40.280.10 7 136 3.8E-46 T 11-10-2018 IPR023620 Small protein B IX88_06205 d9d7b0ca470ac81903ce251e101c5270 158 SUPERFAMILY SSF74982 9 139 1.44E-49 T 11-10-2018 IPR023620 Small protein B IX88_06205 d9d7b0ca470ac81903ce251e101c5270 158 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site IX88_06205 d9d7b0ca470ac81903ce251e101c5270 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 6.0E-56 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 IX88_06205 d9d7b0ca470ac81903ce251e101c5270 158 Pfam PF01668 SmpB protein 15 157 1.5E-56 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 IX88_11210 c85c983ac088ac44ca48771b536efac0 310 Pfam PF03466 LysR substrate binding domain 94 300 3.0E-35 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_11210 c85c983ac088ac44ca48771b536efac0 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 4.9E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_11210 c85c983ac088ac44ca48771b536efac0 310 Gene3D G3DSA:3.40.190.10 168 273 1.4E-56 T 11-10-2018 IX88_11210 c85c983ac088ac44ca48771b536efac0 310 SUPERFAMILY SSF53850 94 306 1.25E-36 T 11-10-2018 IX88_11210 c85c983ac088ac44ca48771b536efac0 310 Gene3D G3DSA:1.10.10.10 7 95 3.7E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_11210 c85c983ac088ac44ca48771b536efac0 310 SUPERFAMILY SSF46785 7 90 9.48E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_11210 c85c983ac088ac44ca48771b536efac0 310 Gene3D G3DSA:3.40.190.10 96 299 1.4E-56 T 11-10-2018 IX88_17690 6fa0af79fe2c3552fc61f22680d86214 269 SUPERFAMILY SSF88713 49 247 1.31E-41 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 IX88_17690 6fa0af79fe2c3552fc61f22680d86214 269 Gene3D G3DSA:3.20.20.370 27 263 2.1E-64 T 11-10-2018 IX88_17690 6fa0af79fe2c3552fc61f22680d86214 269 Pfam PF01522 Polysaccharide deacetylase 84 225 6.5E-30 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 IX88_06335 553a7c547915399be45edc1d41223f2e 151 Pfam PF00583 Acetyltransferase (GNAT) family 15 116 1.3E-15 T 11-10-2018 IPR000182 GNAT domain IX88_06335 553a7c547915399be45edc1d41223f2e 151 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 9 139 1.3E-37 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 IX88_06335 553a7c547915399be45edc1d41223f2e 151 SUPERFAMILY SSF55729 1 142 2.53E-32 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_06335 553a7c547915399be45edc1d41223f2e 151 Gene3D G3DSA:3.40.630.30 1 148 6.2E-41 T 11-10-2018 IX88_09735 c5797a6d2acdf9457afae4336e00a506 395 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_09735 c5797a6d2acdf9457afae4336e00a506 395 SUPERFAMILY SSF53748 2 392 1.88E-138 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_09735 c5797a6d2acdf9457afae4336e00a506 395 PIRSF PIRSF000724 1 395 4.3E-127 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_09735 c5797a6d2acdf9457afae4336e00a506 395 Pfam PF00162 Phosphoglycerate kinase 6 383 1.1E-138 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_09735 c5797a6d2acdf9457afae4336e00a506 395 Gene3D G3DSA:3.40.50.1260 165 383 1.0E-161 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_09735 c5797a6d2acdf9457afae4336e00a506 395 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 393 38.188 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_09735 c5797a6d2acdf9457afae4336e00a506 395 Gene3D G3DSA:3.40.50.1260 10 389 1.0E-161 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_09735 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 4.4E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_09735 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 4.4E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_09735 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 4.4E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_09735 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 4.4E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_09735 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 4.4E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_09735 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 313 338 4.4E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_09735 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 4.4E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_09735 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 4.4E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_09735 c5797a6d2acdf9457afae4336e00a506 395 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 4.4E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_05385 a0b066caff9243416e660aeac741eafa 462 Pfam PF04715 Anthranilate synthase component I, N terminal region 51 132 5.4E-5 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 IX88_05385 a0b066caff9243416e660aeac741eafa 462 Pfam PF00425 chorismate binding enzyme 195 449 2.8E-90 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal IX88_05385 a0b066caff9243416e660aeac741eafa 462 Gene3D G3DSA:3.60.120.10 17 459 1.8E-124 T 11-10-2018 IPR005801 ADC synthase GO:0009058 IX88_05385 a0b066caff9243416e660aeac741eafa 462 SUPERFAMILY SSF56322 55 457 4.45E-110 T 11-10-2018 IPR005801 ADC synthase GO:0009058 IX88_05385 a0b066caff9243416e660aeac741eafa 462 PRINTS PR00095 Anthranilate synthase component I signature 391 405 2.4E-8 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 IX88_05385 a0b066caff9243416e660aeac741eafa 462 PRINTS PR00095 Anthranilate synthase component I signature 311 324 2.4E-8 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 IX88_05385 a0b066caff9243416e660aeac741eafa 462 PRINTS PR00095 Anthranilate synthase component I signature 297 310 2.4E-8 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 IX88_08125 3702d6effc223a957b183a7345a70e5b 397 TIGRFAM TIGR00843 benE: benzoate transporter 1 388 1.0E-187 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 IX88_08125 3702d6effc223a957b183a7345a70e5b 397 Pfam PF03594 Benzoate membrane transport protein 11 387 1.5E-160 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 IX88_07375 d51fa612e940b7bea3ba497759f37625 420 Gene3D G3DSA:3.30.70.270 234 410 1.4E-51 T 11-10-2018 IX88_07375 d51fa612e940b7bea3ba497759f37625 420 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 408 1.4E-47 T 11-10-2018 IPR000160 GGDEF domain IX88_07375 d51fa612e940b7bea3ba497759f37625 420 SMART SM00267 238 412 3.1E-56 T 11-10-2018 IPR000160 GGDEF domain IX88_07375 d51fa612e940b7bea3ba497759f37625 420 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 246 411 3.8E-51 T 11-10-2018 IPR000160 GGDEF domain IX88_07375 d51fa612e940b7bea3ba497759f37625 420 SUPERFAMILY SSF55073 253 411 8.63E-46 T 11-10-2018 IPR029787 Nucleotide cyclase IX88_14550 c26a582138fa530aa5bbef2a007e085e 257 Pfam PF01061 ABC-2 type transporter 10 219 1.1E-35 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 IX88_14550 c26a582138fa530aa5bbef2a007e085e 257 PIRSF PIRSF006648 2 254 1.3E-20 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 IX88_14550 c26a582138fa530aa5bbef2a007e085e 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 177 196 4.9E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 IX88_14550 c26a582138fa530aa5bbef2a007e085e 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 59 81 4.9E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 IX88_14550 c26a582138fa530aa5bbef2a007e085e 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 4.9E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 IX88_03475 caa821a3608db78cb3c07dee1a91d11c 270 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 207 256 1.0E-9 T 11-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 IX88_03475 caa821a3608db78cb3c07dee1a91d11c 270 Gene3D G3DSA:3.60.21.10 2 267 1.5E-63 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like IX88_03475 caa821a3608db78cb3c07dee1a91d11c 270 SUPERFAMILY SSF56300 15 265 3.11E-55 T 11-10-2018 IX88_03475 caa821a3608db78cb3c07dee1a91d11c 270 Pfam PF00149 Calcineurin-like phosphoesterase 14 202 9.0E-13 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 IX88_03475 caa821a3608db78cb3c07dee1a91d11c 270 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 13 256 37.573 T 11-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 IX88_07245 046678a0c561ee8f61d19e6fccb5ee0a 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 305 4.2E-20 T 11-10-2018 IX88_07245 046678a0c561ee8f61d19e6fccb5ee0a 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 4.2E-20 T 11-10-2018 IX88_07245 046678a0c561ee8f61d19e6fccb5ee0a 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 4.2E-20 T 11-10-2018 IX88_07245 046678a0c561ee8f61d19e6fccb5ee0a 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 305 321 4.2E-20 T 11-10-2018 IX88_07245 046678a0c561ee8f61d19e6fccb5ee0a 410 Pfam PF01494 FAD binding domain 6 353 4.6E-33 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 IX88_07245 046678a0c561ee8f61d19e6fccb5ee0a 410 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 398 1.2E-103 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 IX88_07245 046678a0c561ee8f61d19e6fccb5ee0a 410 Gene3D G3DSA:3.50.50.60 6 347 6.7E-92 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07245 046678a0c561ee8f61d19e6fccb5ee0a 410 Gene3D G3DSA:3.30.9.50 80 279 6.7E-92 T 11-10-2018 IX88_07245 046678a0c561ee8f61d19e6fccb5ee0a 410 SUPERFAMILY SSF51905 6 394 4.04E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07245 046678a0c561ee8f61d19e6fccb5ee0a 410 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 304 317 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 IX88_00530 b5e7dfbc5bdb766159ef9910e94ffaea 294 SUPERFAMILY SSF103481 181 279 3.79E-9 T 11-10-2018 IX88_00530 b5e7dfbc5bdb766159ef9910e94ffaea 294 Pfam PF00892 EamA-like transporter family 146 276 4.3E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_08120 74f0c5955ade6cf6e7a33905fa50accf 452 Gene3D G3DSA:1.20.1250.20 19 430 2.2E-75 T 11-10-2018 IX88_08120 74f0c5955ade6cf6e7a33905fa50accf 452 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 8 402 6.9E-130 T 11-10-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0016021|GO:0022857|GO:0055085 IX88_08120 74f0c5955ade6cf6e7a33905fa50accf 452 Pfam PF07690 Major Facilitator Superfamily 29 337 2.0E-38 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_08120 74f0c5955ade6cf6e7a33905fa50accf 452 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_08120 74f0c5955ade6cf6e7a33905fa50accf 452 SUPERFAMILY SSF103473 9 429 7.72E-84 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_10615 5c9139d08ed8e122e1d8ebc274253dbc 234 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 217 9.8E-78 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 IX88_10615 5c9139d08ed8e122e1d8ebc274253dbc 234 Gene3D G3DSA:3.40.1080.10 1 216 3.1E-96 T 11-10-2018 IX88_10615 5c9139d08ed8e122e1d8ebc274253dbc 234 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 11-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 IX88_10615 5c9139d08ed8e122e1d8ebc274253dbc 234 SUPERFAMILY SSF100950 2 226 1.26E-86 T 11-10-2018 IPR037171 NagB/RpiA transferase-like IX88_10615 5c9139d08ed8e122e1d8ebc274253dbc 234 SMART SM00882 5 217 5.3E-89 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 IX88_10615 5c9139d08ed8e122e1d8ebc274253dbc 234 Pfam PF01144 Coenzyme A transferase 6 217 1.7E-77 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 IX88_04170 3bc28a60d47e95bdb6f6e0735376a0d1 85 Gene3D G3DSA:3.30.110.40 2 85 5.9E-28 T 11-10-2018 IPR036868 TusA-like domain superfamily IX88_04170 3bc28a60d47e95bdb6f6e0735376a0d1 85 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 11-10-2018 IPR001455 TusA-like domain IX88_04170 3bc28a60d47e95bdb6f6e0735376a0d1 85 SUPERFAMILY SSF64307 6 85 8.37E-22 T 11-10-2018 IPR036868 TusA-like domain superfamily IX88_04170 3bc28a60d47e95bdb6f6e0735376a0d1 85 Pfam PF01206 Sulfurtransferase TusA 11 84 3.0E-24 T 11-10-2018 IPR001455 TusA-like domain IX88_11750 27a668124845115cdaf1d5764c9a44e3 223 SUPERFAMILY SSF75445 131 201 3.66E-23 T 11-10-2018 IX88_11750 27a668124845115cdaf1d5764c9a44e3 223 SUPERFAMILY SSF100950 7 149 7.67E-44 T 11-10-2018 IPR037171 NagB/RpiA transferase-like IX88_11750 27a668124845115cdaf1d5764c9a44e3 223 Gene3D G3DSA:3.30.70.260 127 198 1.2E-72 T 11-10-2018 IX88_11750 27a668124845115cdaf1d5764c9a44e3 223 Gene3D G3DSA:3.40.50.1360 11 212 1.2E-72 T 11-10-2018 IX88_11750 27a668124845115cdaf1d5764c9a44e3 223 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 7 220 32.888 T 11-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 IX88_11750 27a668124845115cdaf1d5764c9a44e3 223 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 10 217 4.0E-64 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 IX88_11750 27a668124845115cdaf1d5764c9a44e3 223 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 51 216 4.4E-59 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 IX88_04705 52af454df48d20b2252f74ce1065d030 508 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 486 7.4E-49 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 IX88_04705 52af454df48d20b2252f74ce1065d030 508 Gene3D G3DSA:3.20.130.10 305 487 1.8E-61 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 IX88_04705 52af454df48d20b2252f74ce1065d030 508 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 14 285 1.1E-68 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 IX88_04705 52af454df48d20b2252f74ce1065d030 508 PIRSF PIRSF001394 1 505 9.0E-212 T 11-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 IX88_04705 52af454df48d20b2252f74ce1065d030 508 SUPERFAMILY SSF117457 316 486 3.4E-64 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 IX88_04705 52af454df48d20b2252f74ce1065d030 508 Pfam PF05681 Fumarate hydratase (Fumerase) 13 285 2.8E-102 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 IX88_04705 52af454df48d20b2252f74ce1065d030 508 Pfam PF05683 Fumarase C-terminus 289 487 4.7E-78 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 IX88_01130 6061e0bb47d20d9d92724cb6fb5da919 414 SUPERFAMILY SSF103473 23 408 3.27E-55 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_01130 6061e0bb47d20d9d92724cb6fb5da919 414 Pfam PF07690 Major Facilitator Superfamily 267 407 2.4E-10 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_01130 6061e0bb47d20d9d92724cb6fb5da919 414 Pfam PF07690 Major Facilitator Superfamily 37 259 3.9E-27 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_01130 6061e0bb47d20d9d92724cb6fb5da919 414 Gene3D G3DSA:1.20.1250.20 27 411 8.8E-48 T 11-10-2018 IX88_11870 e59081f131dd5898b28a5686f2f1f36c 402 PIRSF PIRSF000521 13 163 6.0E-11 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_11870 e59081f131dd5898b28a5686f2f1f36c 402 PIRSF PIRSF000521 173 401 6.8E-34 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_11870 e59081f131dd5898b28a5686f2f1f36c 402 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 226 263 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_11870 e59081f131dd5898b28a5686f2f1f36c 402 Pfam PF00202 Aminotransferase class-III 26 396 2.3E-101 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_11870 e59081f131dd5898b28a5686f2f1f36c 402 Gene3D G3DSA:3.40.640.10 60 308 2.5E-124 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_11870 e59081f131dd5898b28a5686f2f1f36c 402 SUPERFAMILY SSF53383 14 398 2.28E-110 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_11870 e59081f131dd5898b28a5686f2f1f36c 402 Gene3D G3DSA:3.90.1150.10 26 391 2.5E-124 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_11870 e59081f131dd5898b28a5686f2f1f36c 402 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 397 3.4E-130 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 IX88_11870 e59081f131dd5898b28a5686f2f1f36c 402 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 16 401 68.382 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 IX88_01245 356e5f798ed67e52daf63a10c74e4326 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 90 2.5E-9 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 IX88_01245 356e5f798ed67e52daf63a10c74e4326 325 SUPERFAMILY SSF51735 113 287 2.1E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_01245 356e5f798ed67e52daf63a10c74e4326 325 SUPERFAMILY SSF50129 1 144 1.05E-30 T 11-10-2018 IPR011032 GroES-like superfamily IX88_01245 356e5f798ed67e52daf63a10c74e4326 325 SMART SM00829 11 323 2.2E-6 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 IX88_01245 356e5f798ed67e52daf63a10c74e4326 325 Pfam PF00107 Zinc-binding dehydrogenase 151 270 1.7E-13 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 IX88_01245 356e5f798ed67e52daf63a10c74e4326 325 Gene3D G3DSA:3.90.180.10 4 310 1.4E-86 T 11-10-2018 IX88_01245 356e5f798ed67e52daf63a10c74e4326 325 Gene3D G3DSA:3.40.50.720 122 293 1.4E-86 T 11-10-2018 IX88_06690 c3c67ad4460dadc6159f60774bddd1ca 176 Gene3D G3DSA:3.10.640.10 1 176 4.3E-67 T 11-10-2018 IPR038590 YaeQ superfamily IX88_06690 c3c67ad4460dadc6159f60774bddd1ca 176 SUPERFAMILY SSF52980 2 175 4.02E-62 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 IX88_06690 c3c67ad4460dadc6159f60774bddd1ca 176 Pfam PF07152 YaeQ protein 1 170 3.0E-65 T 11-10-2018 IPR009822 YaeQ IX88_06690 c3c67ad4460dadc6159f60774bddd1ca 176 PIRSF PIRSF011484 1 176 4.7E-59 T 11-10-2018 IPR009822 YaeQ IX88_06690 c3c67ad4460dadc6159f60774bddd1ca 176 SMART SM01322 1 174 1.6E-98 T 11-10-2018 IPR009822 YaeQ IX88_07870 6dccee21ce1f590e95f67d1ca64067ab 291 Gene3D G3DSA:3.40.50.150 2 285 8.6E-45 T 11-10-2018 IX88_07870 6dccee21ce1f590e95f67d1ca64067ab 291 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 8 269 9.9E-46 T 11-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 IX88_07870 6dccee21ce1f590e95f67d1ca64067ab 291 SUPERFAMILY SSF53335 7 288 9.97E-49 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_07870 6dccee21ce1f590e95f67d1ca64067ab 291 Pfam PF04072 Leucine carboxyl methyltransferase 11 193 1.3E-38 T 11-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 IX88_15800 d1aff3c4ef12f9759c0ecd94352d8467 230 Gene3D G3DSA:3.30.160.20 160 230 1.9E-18 T 11-10-2018 IX88_15800 d1aff3c4ef12f9759c0ecd94352d8467 230 SMART SM00358 162 229 2.4E-18 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain IX88_15800 d1aff3c4ef12f9759c0ecd94352d8467 230 SMART SM00535 25 155 1.3E-50 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 IX88_15800 d1aff3c4ef12f9759c0ecd94352d8467 230 ProSitePatterns PS00517 Ribonuclease III family signature. 43 51 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 IX88_15800 d1aff3c4ef12f9759c0ecd94352d8467 230 Hamap MF_00104 Ribonuclease 3 [rnc]. 13 225 29.17 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 IX88_15800 d1aff3c4ef12f9759c0ecd94352d8467 230 Pfam PF00035 Double-stranded RNA binding motif 162 228 2.2E-11 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain IX88_15800 d1aff3c4ef12f9759c0ecd94352d8467 230 Pfam PF14622 Ribonuclease-III-like 24 146 3.0E-33 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 IX88_15800 d1aff3c4ef12f9759c0ecd94352d8467 230 SUPERFAMILY SSF54768 114 228 6.13E-27 T 11-10-2018 IX88_15800 d1aff3c4ef12f9759c0ecd94352d8467 230 SUPERFAMILY SSF69065 12 164 1.66E-48 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 IX88_15800 d1aff3c4ef12f9759c0ecd94352d8467 230 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 15 227 2.8E-70 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 IX88_15800 d1aff3c4ef12f9759c0ecd94352d8467 230 Gene3D G3DSA:1.10.1520.10 9 154 6.6E-45 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00097 Anthranilate synthase component II signature 56 65 4.9E-6 T 11-10-2018 IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00097 Anthranilate synthase component II signature 174 187 4.9E-6 T 11-10-2018 IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00097 Anthranilate synthase component II signature 83 94 4.9E-6 T 11-10-2018 IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 53 67 5.2E-5 T 11-10-2018 IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 83 99 5.2E-5 T 11-10-2018 IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 12 26 5.2E-5 T 11-10-2018 IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 12 201 4.1E-80 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 Gene3D G3DSA:3.30.300.10 403 522 2.7E-49 T 11-10-2018 IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 Gene3D G3DSA:3.40.50.880 11 203 1.2E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 Pfam PF00958 GMP synthase C terminal domain 430 521 1.9E-40 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 Pfam PF02540 NAD synthase 217 288 2.2E-8 T 11-10-2018 IPR022310 NAD/GMP synthase IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 210 522 6.2E-147 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 Pfam PF00117 Glutamine amidotransferase class-I 14 197 4.8E-41 T 11-10-2018 IPR017926 Glutamine amidotransferase IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 9 522 55.79 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 SUPERFAMILY SSF52317 8 234 1.13E-59 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 SUPERFAMILY SSF54810 402 522 4.45E-48 T 11-10-2018 IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 SUPERFAMILY SSF52402 194 417 2.03E-60 T 11-10-2018 IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 56 65 2.8E-7 T 11-10-2018 IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 2.8E-7 T 11-10-2018 IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 83 94 2.8E-7 T 11-10-2018 IX88_02955 47c4a4ce293bfea29f93f5f2224fc7b0 522 Gene3D G3DSA:3.40.50.620 206 402 1.3E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_12370 b0f0b0dbb6618a2b002a33b1e057dd8a 251 Pfam PF00877 NlpC/P60 family 122 244 6.5E-11 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain IX88_12370 b0f0b0dbb6618a2b002a33b1e057dd8a 251 Pfam PF14464 Prokaryotic homologs of the JAB domain 6 85 1.2E-12 T 11-10-2018 IPR028090 JAB domain, prokaryotic IX88_12370 b0f0b0dbb6618a2b002a33b1e057dd8a 251 Gene3D G3DSA:3.40.140.10 1 108 1.1E-21 T 11-10-2018 IX88_12370 b0f0b0dbb6618a2b002a33b1e057dd8a 251 SUPERFAMILY SSF102712 2 99 1.7E-20 T 11-10-2018 IX88_12370 b0f0b0dbb6618a2b002a33b1e057dd8a 251 SMART SM00232 1 122 6.5E-7 T 11-10-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 IX88_12370 b0f0b0dbb6618a2b002a33b1e057dd8a 251 Gene3D G3DSA:3.90.1720.10 109 250 3.2E-8 T 11-10-2018 IX88_12370 b0f0b0dbb6618a2b002a33b1e057dd8a 251 SUPERFAMILY SSF54001 104 247 1.08E-10 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily IX88_02400 e28bfa5373d2357554bf82a64695e28c 116 SMART SM00248 62 91 5.6E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 IX88_02400 e28bfa5373d2357554bf82a64695e28c 116 Pfam PF12796 Ankyrin repeats (3 copies) 36 113 4.1E-14 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain IX88_02400 e28bfa5373d2357554bf82a64695e28c 116 SUPERFAMILY SSF48403 34 114 4.2E-19 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily IX88_02400 e28bfa5373d2357554bf82a64695e28c 116 Gene3D G3DSA:1.25.40.20 14 116 8.7E-21 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily IX88_05995 6cc8852d14123c849d71c6120fab7b3b 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 8.1E-45 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_05995 6cc8852d14123c849d71c6120fab7b3b 154 Pfam PF00210 Ferritin-like domain 8 143 2.0E-34 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 IX88_05995 6cc8852d14123c849d71c6120fab7b3b 154 PIRSF PIRSF002560 1 154 1.8E-58 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_05995 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 3 22 5.0E-41 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_05995 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 85 105 5.0E-41 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_05995 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 23 43 5.0E-41 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_05995 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 44 64 5.0E-41 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_05995 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 106 126 5.0E-41 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_05995 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 128 149 5.0E-41 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_05995 6cc8852d14123c849d71c6120fab7b3b 154 SUPERFAMILY SSF47240 1 154 1.21E-45 T 11-10-2018 IPR009078 Ferritin-like superfamily IX88_05995 6cc8852d14123c849d71c6120fab7b3b 154 Gene3D G3DSA:1.20.1260.10 1 154 6.3E-59 T 11-10-2018 IPR012347 Ferritin-like IX88_03640 a787310025a76be0e52b2f12f99ad9be 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 175 1.7E-62 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 IX88_03640 a787310025a76be0e52b2f12f99ad9be 177 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 9.9E-16 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 IX88_03640 a787310025a76be0e52b2f12f99ad9be 177 PRINTS PR00338 Transcription termination factor NUSG signature 152 168 9.9E-16 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 IX88_03640 a787310025a76be0e52b2f12f99ad9be 177 PRINTS PR00338 Transcription termination factor NUSG signature 134 149 9.9E-16 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 IX88_03640 a787310025a76be0e52b2f12f99ad9be 177 Pfam PF02357 Transcription termination factor nusG 2 107 1.1E-27 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 IX88_03640 a787310025a76be0e52b2f12f99ad9be 177 SMART SM00738 1 110 1.7E-43 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 IX88_03640 a787310025a76be0e52b2f12f99ad9be 177 Gene3D G3DSA:2.30.30.30 118 175 1.2E-19 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 IX88_03640 a787310025a76be0e52b2f12f99ad9be 177 SMART SM00739 122 149 0.0029 T 11-10-2018 IPR005824 KOW IX88_03640 a787310025a76be0e52b2f12f99ad9be 177 SUPERFAMILY SSF50104 120 175 4.21E-15 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily IX88_03640 a787310025a76be0e52b2f12f99ad9be 177 Gene3D G3DSA:3.30.70.940 1 117 5.7E-46 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 IX88_03640 a787310025a76be0e52b2f12f99ad9be 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 176 22.877 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 IX88_03640 a787310025a76be0e52b2f12f99ad9be 177 SUPERFAMILY SSF82679 1 112 1.31E-37 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 IX88_12025 549086a1aa9688bc61ba9653a215f0ea 349 SUPERFAMILY SSF54752 269 325 6.54E-20 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal IX88_12025 549086a1aa9688bc61ba9653a215f0ea 349 Hamap MF_00268 Protein RecA [recA]. 5 329 51.766 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IX88_12025 549086a1aa9688bc61ba9653a215f0ea 349 PRINTS PR00142 RecA protein signature 210 238 5.4E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IX88_12025 549086a1aa9688bc61ba9653a215f0ea 349 PRINTS PR00142 RecA protein signature 165 194 5.4E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IX88_12025 549086a1aa9688bc61ba9653a215f0ea 349 PRINTS PR00142 RecA protein signature 243 272 5.4E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IX88_12025 549086a1aa9688bc61ba9653a215f0ea 349 PRINTS PR00142 RecA protein signature 93 122 5.4E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IX88_12025 549086a1aa9688bc61ba9653a215f0ea 349 PRINTS PR00142 RecA protein signature 127 156 5.4E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IX88_12025 549086a1aa9688bc61ba9653a215f0ea 349 PRINTS PR00142 RecA protein signature 297 314 5.4E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IX88_12025 549086a1aa9688bc61ba9653a215f0ea 349 Gene3D G3DSA:3.40.50.300 26 267 7.7E-85 T 11-10-2018 IX88_12025 549086a1aa9688bc61ba9653a215f0ea 349 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 7.1E-172 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IX88_12025 549086a1aa9688bc61ba9653a215f0ea 349 SMART SM00382 57 228 3.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_12025 549086a1aa9688bc61ba9653a215f0ea 349 ProSitePatterns PS00321 recA signature. 213 221 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 IX88_12025 549086a1aa9688bc61ba9653a215f0ea 349 SUPERFAMILY SSF52540 4 266 5.55E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_12025 549086a1aa9688bc61ba9653a215f0ea 349 Pfam PF00154 recA bacterial DNA recombination protein 7 267 3.2E-148 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 IX88_12025 549086a1aa9688bc61ba9653a215f0ea 349 Gene3D G3DSA:3.30.250.10 269 327 7.7E-25 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal IX88_06670 378a33ac9acdbe04d2e74224649dc2b9 171 Gene3D G3DSA:3.10.129.10 6 162 1.7E-58 T 11-10-2018 IX88_06670 378a33ac9acdbe04d2e74224649dc2b9 171 SUPERFAMILY SSF54637 9 159 1.08E-45 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_06670 378a33ac9acdbe04d2e74224649dc2b9 171 Pfam PF03061 Thioesterase superfamily 32 103 1.8E-18 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 IX88_06670 378a33ac9acdbe04d2e74224649dc2b9 171 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 7 102 9.9E-11 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 IX88_13400 c36bc1b97cc442fa87380a6a91116a41 292 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 17.191 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 IX88_13400 c36bc1b97cc442fa87380a6a91116a41 292 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 277 8.8E-85 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 IX88_13400 c36bc1b97cc442fa87380a6a91116a41 292 Gene3D G3DSA:1.10.357.140 13 164 4.5E-21 T 11-10-2018 IX88_13400 c36bc1b97cc442fa87380a6a91116a41 292 Pfam PF01040 UbiA prenyltransferase family 18 267 7.3E-58 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 IX88_13400 c36bc1b97cc442fa87380a6a91116a41 292 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site IX88_10705 143ede3bda4c01965bf93d0e8852c3ce 163 TIGRFAM TIGR03231 anthran_1_2_B: anthranilate 1,2-dioxygenase, small subunit 9 163 1.9E-89 T 11-10-2018 IPR017640 Anthranilate 1,2-dioxygenase, small subunit GO:0019439 KEGG: 00627+1.14.12.1|MetaCyc: PWY-2421|MetaCyc: PWY-5648|MetaCyc: PWY-6079 IX88_10705 143ede3bda4c01965bf93d0e8852c3ce 163 Pfam PF00866 Ring hydroxylating beta subunit 16 155 3.1E-42 T 11-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 IX88_10705 143ede3bda4c01965bf93d0e8852c3ce 163 Gene3D G3DSA:3.10.450.50 6 163 7.3E-40 T 11-10-2018 IX88_10705 143ede3bda4c01965bf93d0e8852c3ce 163 SUPERFAMILY SSF54427 1 162 5.92E-44 T 11-10-2018 IPR032710 NTF2-like domain superfamily IX88_18115 7b994bcf1d51354035b319a5bc6e2db5 191 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 2 191 1.1E-85 T 11-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 IX88_18115 7b994bcf1d51354035b319a5bc6e2db5 191 SUPERFAMILY SSF53271 4 189 8.32E-45 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like IX88_18115 7b994bcf1d51354035b319a5bc6e2db5 191 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 42.159 T 11-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 IX88_18115 7b994bcf1d51354035b319a5bc6e2db5 191 Gene3D G3DSA:3.40.50.2020 3 188 2.0E-52 T 11-10-2018 IX88_15570 d660981a787d885326806a28d237ca47 392 Gene3D G3DSA:1.20.1250.20 199 382 8.1E-9 T 11-10-2018 IX88_15570 d660981a787d885326806a28d237ca47 392 Gene3D G3DSA:1.20.1250.20 2 193 3.6E-12 T 11-10-2018 IX88_15570 d660981a787d885326806a28d237ca47 392 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 17 375 1.1E-54 T 11-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB IX88_15570 d660981a787d885326806a28d237ca47 392 SUPERFAMILY SSF103473 9 380 1.09E-29 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_12590 26f0aa733e6340db82492451e515b463 133 Gene3D G3DSA:3.30.40.60 1 107 2.6E-11 T 11-10-2018 IX88_12590 26f0aa733e6340db82492451e515b463 133 SMART SM00507 6 75 4.6E-4 T 11-10-2018 IPR003615 HNH nuclease IX88_12590 26f0aa733e6340db82492451e515b463 133 Pfam PF01844 HNH endonuclease 19 78 1.8E-4 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 IX88_07000 14c0aab14b725d4d9c2821d349052515 162 SUPERFAMILY SSF53474 2 95 5.68E-11 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_07000 14c0aab14b725d4d9c2821d349052515 162 Gene3D G3DSA:3.40.50.1820 1 161 5.7E-17 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_07000 14c0aab14b725d4d9c2821d349052515 162 Pfam PF05728 Uncharacterised protein family (UPF0227) 2 88 1.8E-10 T 11-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA IX88_04475 c8974a45c59235030307687d18c55925 336 Gene3D G3DSA:3.90.180.10 22 333 9.2E-105 T 11-10-2018 IX88_04475 c8974a45c59235030307687d18c55925 336 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 336 9.2E-165 T 11-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 IX88_04475 c8974a45c59235030307687d18c55925 336 SUPERFAMILY SSF50129 1 144 2.13E-32 T 11-10-2018 IPR011032 GroES-like superfamily IX88_04475 c8974a45c59235030307687d18c55925 336 Gene3D G3DSA:3.40.50.720 128 272 9.2E-105 T 11-10-2018 IX88_04475 c8974a45c59235030307687d18c55925 336 Pfam PF13602 Zinc-binding dehydrogenase 193 333 3.3E-19 T 11-10-2018 IX88_04475 c8974a45c59235030307687d18c55925 336 SMART SM00829 13 333 2.1E-10 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 IX88_04475 c8974a45c59235030307687d18c55925 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 91 2.2E-7 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 IX88_04475 c8974a45c59235030307687d18c55925 336 SUPERFAMILY SSF51735 118 283 2.3E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_10375 f14861fef3a4f8438f75e130b55a9c49 198 SUPERFAMILY SSF111304 3 197 4.58E-75 T 11-10-2018 IPR023627 Recombination protein RecR IX88_10375 f14861fef3a4f8438f75e130b55a9c49 198 Gene3D G3DSA:3.40.1360.10 76 197 3.4E-44 T 11-10-2018 IX88_10375 f14861fef3a4f8438f75e130b55a9c49 198 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 IX88_10375 f14861fef3a4f8438f75e130b55a9c49 198 SMART SM00493 79 164 1.4E-17 T 11-10-2018 IPR006171 TOPRIM domain IX88_10375 f14861fef3a4f8438f75e130b55a9c49 198 Gene3D G3DSA:1.10.8.420 2 51 1.2E-14 T 11-10-2018 IX88_10375 f14861fef3a4f8438f75e130b55a9c49 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 194 7.4E-74 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 IX88_10375 f14861fef3a4f8438f75e130b55a9c49 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 96.091 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 IX88_10375 f14861fef3a4f8438f75e130b55a9c49 198 Pfam PF02132 RecR protein 41 77 1.4E-13 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger IX88_10375 f14861fef3a4f8438f75e130b55a9c49 198 Pfam PF13662 Toprim domain 81 170 8.5E-24 T 11-10-2018 IPR006171 TOPRIM domain IX88_05295 3463d26f2d412513d96f78d859195c81 145 SUPERFAMILY SSF46785 10 120 4.74E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_05295 3463d26f2d412513d96f78d859195c81 145 SMART SM00347 31 130 9.9E-24 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IX88_05295 3463d26f2d412513d96f78d859195c81 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 3.3E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IX88_05295 3463d26f2d412513d96f78d859195c81 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 3.3E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IX88_05295 3463d26f2d412513d96f78d859195c81 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 3.3E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IX88_05295 3463d26f2d412513d96f78d859195c81 145 Pfam PF01047 MarR family 38 96 5.2E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 IX88_05295 3463d26f2d412513d96f78d859195c81 145 Gene3D G3DSA:1.10.10.10 1 144 1.8E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_04045 bbb3f8689591d38ab7209aedff27eb37 539 Pfam PF03109 ABC1 family 114 231 4.7E-33 T 11-10-2018 IPR004147 UbiB domain IX88_04045 bbb3f8689591d38ab7209aedff27eb37 539 SUPERFAMILY SSF56112 95 435 9.08E-24 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily IX88_03945 9e4860fe3819cbcafd223fd681977e83 264 Gene3D G3DSA:3.20.20.70 5 264 4.1E-86 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_03945 9e4860fe3819cbcafd223fd681977e83 264 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 6 259 56.937 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_03945 9e4860fe3819cbcafd223fd681977e83 264 SUPERFAMILY SSF51351 7 260 4.97E-80 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_03945 9e4860fe3819cbcafd223fd681977e83 264 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 10 250 3.7E-52 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_03945 9e4860fe3819cbcafd223fd681977e83 264 ProSitePatterns PS00171 Triosephosphate isomerase active site. 177 187 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_03945 9e4860fe3819cbcafd223fd681977e83 264 Pfam PF00121 Triosephosphate isomerase 9 257 4.9E-81 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_17405 4993cf8a839276d7298cbbf6b4e00a88 147 SUPERFAMILY SSF54593 1 143 6.97E-30 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IX88_17405 4993cf8a839276d7298cbbf6b4e00a88 147 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 140 2.0E-6 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IX88_17405 4993cf8a839276d7298cbbf6b4e00a88 147 Gene3D G3DSA:3.10.180.10 1 147 1.2E-43 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IX88_08025 e529285af10964beead380998c178924 734 Pfam PF01170 Putative RNA methylase family UPF0020 175 387 1.1E-35 T 11-10-2018 IPR000241 Putative RNA methylase domain IX88_08025 e529285af10964beead380998c178924 734 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 504 688 1.9E-19 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 IX88_08025 e529285af10964beead380998c178924 734 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 323 329 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 IX88_08025 e529285af10964beead380998c178924 734 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 208 222 3.0E-5 T 11-10-2018 IX88_08025 e529285af10964beead380998c178924 734 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 320 332 3.0E-5 T 11-10-2018 IX88_08025 e529285af10964beead380998c178924 734 PIRSF PIRSF037618 6 732 2.0E-287 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 IX88_08025 e529285af10964beead380998c178924 734 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 210 221 - T 11-10-2018 IPR000241 Putative RNA methylase domain IX88_08025 e529285af10964beead380998c178924 734 SUPERFAMILY SSF53335 422 730 1.34E-61 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_08025 e529285af10964beead380998c178924 734 SMART SM00981 69 167 2.1E-7 T 11-10-2018 IPR004114 THUMP domain GO:0003723 IX88_08025 e529285af10964beead380998c178924 734 Gene3D G3DSA:3.40.50.150 511 730 1.8E-68 T 11-10-2018 IX88_08025 e529285af10964beead380998c178924 734 Gene3D G3DSA:3.30.750.80 419 510 1.6E-33 T 11-10-2018 IX88_08025 e529285af10964beead380998c178924 734 Pfam PF02926 THUMP domain 32 154 7.2E-11 T 11-10-2018 IPR004114 THUMP domain GO:0003723 IX88_08025 e529285af10964beead380998c178924 734 Gene3D G3DSA:3.30.2130.30 12 269 9.2E-115 T 11-10-2018 IX88_08025 e529285af10964beead380998c178924 734 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 10 731 29.674 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 IX88_08025 e529285af10964beead380998c178924 734 SUPERFAMILY SSF53335 162 373 1.42E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_08025 e529285af10964beead380998c178924 734 Gene3D G3DSA:3.40.50.150 182 387 9.2E-115 T 11-10-2018 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 Gene3D G3DSA:3.20.19.10 678 917 2.8E-110 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 Gene3D G3DSA:1.10.1440.20 616 675 3.0E-19 T 11-10-2018 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 23 916 0.0 T 11-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 Pfam PF00330 Aconitase family (aconitate hydratase) 76 587 4.7E-181 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 Gene3D G3DSA:3.30.499.20 8 375 1.2E-160 T 11-10-2018 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 PRINTS PR00415 Aconitase family signature 149 162 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 PRINTS PR00415 Aconitase family signature 173 181 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 PRINTS PR00415 Aconitase family signature 518 531 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 PRINTS PR00415 Aconitase family signature 456 467 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 PRINTS PR00415 Aconitase family signature 296 309 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 PRINTS PR00415 Aconitase family signature 206 219 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 PRINTS PR00415 Aconitase family signature 220 235 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 PRINTS PR00415 Aconitase family signature 282 295 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 PRINTS PR00415 Aconitase family signature 375 389 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 Gene3D G3DSA:3.30.499.10 376 615 3.9E-98 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 Pfam PF00694 Aconitase C-terminal domain 716 842 1.4E-50 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 ProSitePatterns PS01244 Aconitase family signature 2. 518 531 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 SUPERFAMILY SSF52016 655 915 1.35E-89 T 11-10-2018 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 SUPERFAMILY SSF53732 7 651 6.41E-226 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 IX88_04975 0d2f0bf6f81e696bbb21ccaaab348f8b 918 ProSitePatterns PS00450 Aconitase family signature 1. 452 468 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 IX88_00770 4e873c2070d0323df05a8ed9a925686e 610 SUPERFAMILY SSF56519 68 262 3.01E-38 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 IX88_00770 4e873c2070d0323df05a8ed9a925686e 610 Gene3D G3DSA:3.90.1310.10 58 149 2.1E-10 T 11-10-2018 IX88_00770 4e873c2070d0323df05a8ed9a925686e 610 Gene3D G3DSA:3.90.1310.10 150 263 2.5E-31 T 11-10-2018 IX88_00770 4e873c2070d0323df05a8ed9a925686e 610 SUPERFAMILY SSF56601 214 602 5.96E-92 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like IX88_00770 4e873c2070d0323df05a8ed9a925686e 610 Pfam PF00905 Penicillin binding protein transpeptidase domain 289 587 2.8E-73 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 IX88_00770 4e873c2070d0323df05a8ed9a925686e 610 Gene3D G3DSA:3.30.450.330 264 591 1.9E-124 T 11-10-2018 IX88_00770 4e873c2070d0323df05a8ed9a925686e 610 Pfam PF03717 Penicillin-binding Protein dimerisation domain 72 247 3.9E-17 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 IX88_00770 4e873c2070d0323df05a8ed9a925686e 610 Gene3D G3DSA:3.40.710.10 325 507 1.9E-124 T 11-10-2018 IX88_00770 4e873c2070d0323df05a8ed9a925686e 610 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 24 602 41.173 T 11-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 IX88_01990 047c0126f978417231a8fc41bed3b0dc 300 Pfam PF03466 LysR substrate binding domain 89 292 2.5E-40 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_01990 047c0126f978417231a8fc41bed3b0dc 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.2E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_01990 047c0126f978417231a8fc41bed3b0dc 300 Gene3D G3DSA:3.40.190.10 93 290 1.6E-59 T 11-10-2018 IX88_01990 047c0126f978417231a8fc41bed3b0dc 300 SUPERFAMILY SSF53850 90 294 7.14E-40 T 11-10-2018 IX88_01990 047c0126f978417231a8fc41bed3b0dc 300 Gene3D G3DSA:1.10.10.10 4 91 2.3E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_01990 047c0126f978417231a8fc41bed3b0dc 300 Gene3D G3DSA:3.40.190.10 164 263 1.6E-59 T 11-10-2018 IX88_01990 047c0126f978417231a8fc41bed3b0dc 300 SUPERFAMILY SSF46785 5 89 1.4E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_10780 e2989e5b91f44138cae1f75ce6a96981 350 Gene3D G3DSA:3.20.20.140 2 350 1.8E-109 T 11-10-2018 IX88_10780 e2989e5b91f44138cae1f75ce6a96981 350 ProSitePatterns PS00869 Renal dipeptidase active site. 131 153 - T 11-10-2018 IPR000180 Membrane dipeptidase, active site GO:0006508|GO:0008235|GO:0008239|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 IX88_10780 e2989e5b91f44138cae1f75ce6a96981 350 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 1 345 8.9E-91 T 11-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 IX88_10780 e2989e5b91f44138cae1f75ce6a96981 350 SUPERFAMILY SSF51556 3 348 2.04E-85 T 11-10-2018 IPR032466 Metal-dependent hydrolase IX88_00885 626394f40b02730cf0f0b5457f110fa3 553 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_00885 626394f40b02730cf0f0b5457f110fa3 553 Pfam PF00005 ABC transporter 340 473 2.5E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_00885 626394f40b02730cf0f0b5457f110fa3 553 Pfam PF12848 ABC transporter 230 304 1.1E-11 T 11-10-2018 IPR032781 ABC-transporter extension domain IX88_00885 626394f40b02730cf0f0b5457f110fa3 553 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_00885 626394f40b02730cf0f0b5457f110fa3 553 Gene3D G3DSA:3.40.50.300 287 552 2.0E-74 T 11-10-2018 IX88_00885 626394f40b02730cf0f0b5457f110fa3 553 SUPERFAMILY SSF52540 302 531 3.55E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_00885 626394f40b02730cf0f0b5457f110fa3 553 Pfam PF00005 ABC transporter 22 191 1.9E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_00885 626394f40b02730cf0f0b5457f110fa3 553 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 551 2.9E-290 T 11-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 IX88_00885 626394f40b02730cf0f0b5457f110fa3 553 SUPERFAMILY SSF52540 9 244 9.61E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_00885 626394f40b02730cf0f0b5457f110fa3 553 Gene3D G3DSA:3.40.50.300 1 286 4.7E-85 T 11-10-2018 IX88_00885 626394f40b02730cf0f0b5457f110fa3 553 SMART SM00382 348 523 2.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_00885 626394f40b02730cf0f0b5457f110fa3 553 SMART SM00382 31 236 4.1E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_10005 89add2ce7c62f165e69143b7c58e45cf 88 Pfam PF01649 Ribosomal protein S20 2 84 1.5E-26 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_10005 89add2ce7c62f165e69143b7c58e45cf 88 Gene3D G3DSA:1.20.58.110 1 87 3.8E-28 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_10005 89add2ce7c62f165e69143b7c58e45cf 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 86 3.2E-27 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_10005 89add2ce7c62f165e69143b7c58e45cf 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 88 5.0E-35 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_10005 89add2ce7c62f165e69143b7c58e45cf 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.746 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_10005 89add2ce7c62f165e69143b7c58e45cf 88 SUPERFAMILY SSF46992 3 86 2.22E-31 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_13210 b4ae8a653822b681228a245fadd1016f 211 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 50 209 2.3E-41 T 11-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 IX88_13210 b4ae8a653822b681228a245fadd1016f 211 SUPERFAMILY SSF47240 55 180 8.67E-16 T 11-10-2018 IPR009078 Ferritin-like superfamily IX88_13210 b4ae8a653822b681228a245fadd1016f 211 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 11 211 29.325 T 11-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 IX88_16845 b743742b80f47e92ce4c7593a61e025b 416 Gene3D G3DSA:2.40.50.100 70 214 1.5E-104 T 11-10-2018 IX88_16845 b743742b80f47e92ce4c7593a61e025b 416 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 297 1.6E-14 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IX88_16845 b743742b80f47e92ce4c7593a61e025b 416 Gene3D G3DSA:2.40.420.20 309 378 1.5E-104 T 11-10-2018 IX88_16845 b743742b80f47e92ce4c7593a61e025b 416 Gene3D G3DSA:2.40.30.170 57 308 1.5E-104 T 11-10-2018 IX88_16845 b743742b80f47e92ce4c7593a61e025b 416 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 380 2.3E-82 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 IX88_16845 b743742b80f47e92ce4c7593a61e025b 416 SUPERFAMILY SSF111369 59 305 2.62E-79 T 11-10-2018 IX88_16845 b743742b80f47e92ce4c7593a61e025b 416 Pfam PF00529 HlyD membrane-fusion protein of T1SS 298 365 1.1E-7 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 IX88_16845 b743742b80f47e92ce4c7593a61e025b 416 Gene3D G3DSA:1.10.287.470 105 178 1.5E-104 T 11-10-2018 IX88_09415 d0c25b340031f93b0b99fc28f8d90656 280 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 49 117 2.6E-14 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 IX88_09415 d0c25b340031f93b0b99fc28f8d90656 280 SUPERFAMILY SSF161098 52 256 5.49E-32 T 11-10-2018 IPR035906 MetI-like superfamily IX88_09415 d0c25b340031f93b0b99fc28f8d90656 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 271 2.7E-13 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_09415 d0c25b340031f93b0b99fc28f8d90656 280 Gene3D G3DSA:1.10.3720.10 39 272 1.6E-39 T 11-10-2018 IPR035906 MetI-like superfamily IX88_05250 a970908bfde096520d8cd77c0bbfe21b 427 SUPERFAMILY SSF56037 300 403 2.09E-15 T 11-10-2018 IX88_05250 a970908bfde096520d8cd77c0bbfe21b 427 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 271 17.472 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 IX88_05250 a970908bfde096520d8cd77c0bbfe21b 427 Gene3D G3DSA:3.40.50.620 1 198 9.2E-59 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_05250 a970908bfde096520d8cd77c0bbfe21b 427 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 337 378 2.1E-13 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 IX88_05250 a970908bfde096520d8cd77c0bbfe21b 427 SUPERFAMILY SSF52402 1 197 1.08E-46 T 11-10-2018 IX88_05250 a970908bfde096520d8cd77c0bbfe21b 427 Pfam PF01171 PP-loop family 1 164 1.0E-43 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 IX88_05250 a970908bfde096520d8cd77c0bbfe21b 427 Pfam PF11734 TilS substrate C-terminal domain 334 394 6.7E-8 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 IX88_05250 a970908bfde096520d8cd77c0bbfe21b 427 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 1 168 1.2E-44 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 IX88_05250 a970908bfde096520d8cd77c0bbfe21b 427 SUPERFAMILY SSF82829 200 283 4.84E-20 T 11-10-2018 IX88_05250 a970908bfde096520d8cd77c0bbfe21b 427 Gene3D G3DSA:1.20.59.20 199 282 1.7E-13 T 11-10-2018 IX88_05250 a970908bfde096520d8cd77c0bbfe21b 427 Pfam PF09179 TilS substrate binding domain 212 279 8.7E-12 T 11-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 IX88_05250 a970908bfde096520d8cd77c0bbfe21b 427 SMART SM00977 333 408 1.7E-8 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 IX88_09935 195d252144ae6135d6d7e71cea8791b6 292 Pfam PF01618 MotA/TolQ/ExbB proton channel family 163 265 1.5E-34 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel IX88_06840 78076a6816a74660f8f20375eb4e9bd6 301 SUPERFAMILY SSF53850 98 300 6.88E-31 T 11-10-2018 IX88_06840 78076a6816a74660f8f20375eb4e9bd6 301 Gene3D G3DSA:1.10.10.10 11 100 1.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_06840 78076a6816a74660f8f20375eb4e9bd6 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 2.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_06840 78076a6816a74660f8f20375eb4e9bd6 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 2.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_06840 78076a6816a74660f8f20375eb4e9bd6 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 2.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_06840 78076a6816a74660f8f20375eb4e9bd6 301 Gene3D G3DSA:3.40.190.10 169 267 4.0E-43 T 11-10-2018 IX88_06840 78076a6816a74660f8f20375eb4e9bd6 301 Pfam PF03466 LysR substrate binding domain 98 299 7.4E-30 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_06840 78076a6816a74660f8f20375eb4e9bd6 301 Gene3D G3DSA:3.40.190.10 109 295 4.0E-43 T 11-10-2018 IX88_06840 78076a6816a74660f8f20375eb4e9bd6 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 4.3E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_06840 78076a6816a74660f8f20375eb4e9bd6 301 SUPERFAMILY SSF46785 9 120 4.05E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_15220 6e5c2588e6e4345abeea2aa9f1650654 322 Gene3D G3DSA:3.40.50.12260 192 295 6.6E-77 T 11-10-2018 IX88_15220 6e5c2588e6e4345abeea2aa9f1650654 322 Pfam PF01497 Periplasmic binding protein 59 298 1.1E-31 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain IX88_15220 6e5c2588e6e4345abeea2aa9f1650654 322 SUPERFAMILY SSF53807 38 304 2.35E-60 T 11-10-2018 IX88_15220 6e5c2588e6e4345abeea2aa9f1650654 322 Gene3D G3DSA:3.40.50.12250 43 302 6.6E-77 T 11-10-2018 IX88_09450 ab9ff38eb5b94543734dbb8923beb7ee 186 SUPERFAMILY SSF46689 2 65 1.39E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_09450 ab9ff38eb5b94543734dbb8923beb7ee 186 SUPERFAMILY SSF48498 76 159 2.05E-9 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_09450 ab9ff38eb5b94543734dbb8923beb7ee 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 6.3E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_09450 ab9ff38eb5b94543734dbb8923beb7ee 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.8E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_09450 ab9ff38eb5b94543734dbb8923beb7ee 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.8E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_09450 ab9ff38eb5b94543734dbb8923beb7ee 186 Gene3D G3DSA:1.10.357.10 1 183 8.1E-38 T 11-10-2018 IX88_02695 a6f13dfa4e87a9dbc14053c479bc7597 385 ProSitePatterns PS00480 Citrate synthase signature. 267 279 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 IX88_02695 a6f13dfa4e87a9dbc14053c479bc7597 385 Pfam PF00285 Citrate synthase, C-terminal domain 18 366 1.2E-113 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 IX88_02695 a6f13dfa4e87a9dbc14053c479bc7597 385 Gene3D G3DSA:1.10.580.10 38 364 1.3E-126 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 IX88_02695 a6f13dfa4e87a9dbc14053c479bc7597 385 Gene3D G3DSA:1.10.230.10 233 331 1.3E-126 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain IX88_02695 a6f13dfa4e87a9dbc14053c479bc7597 385 PRINTS PR00143 Citrate synthase signature 185 200 9.1E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 IX88_02695 a6f13dfa4e87a9dbc14053c479bc7597 385 PRINTS PR00143 Citrate synthase signature 317 333 9.1E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 IX88_02695 a6f13dfa4e87a9dbc14053c479bc7597 385 PRINTS PR00143 Citrate synthase signature 207 235 9.1E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 IX88_02695 a6f13dfa4e87a9dbc14053c479bc7597 385 PRINTS PR00143 Citrate synthase signature 260 280 9.1E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 IX88_02695 a6f13dfa4e87a9dbc14053c479bc7597 385 PRINTS PR00143 Citrate synthase signature 135 148 9.1E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 IX88_02695 a6f13dfa4e87a9dbc14053c479bc7597 385 PRINTS PR00143 Citrate synthase signature 337 351 9.1E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 IX88_02695 a6f13dfa4e87a9dbc14053c479bc7597 385 SUPERFAMILY SSF48256 19 375 8.77E-122 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 IX88_02695 a6f13dfa4e87a9dbc14053c479bc7597 385 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 17 384 6.0E-152 T 11-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 IX88_02695 a6f13dfa4e87a9dbc14053c479bc7597 385 PIRSF PIRSF001369 11 385 3.4E-109 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type IX88_09840 37b1881484a8b877bec2a8eade43222b 233 Pfam PF07963 Prokaryotic N-terminal methylation motif 27 49 2.7E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_09840 37b1881484a8b877bec2a8eade43222b 233 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 29 49 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_09840 37b1881484a8b877bec2a8eade43222b 233 Pfam PF11612 Type II secretion system (T2SS), protein J 83 212 6.2E-17 T 11-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 IX88_09840 37b1881484a8b877bec2a8eade43222b 233 Gene3D G3DSA:3.10.610.10 60 165 4.5E-7 T 11-10-2018 IX88_09840 37b1881484a8b877bec2a8eade43222b 233 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 30 208 8.8E-22 T 11-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 IX88_09840 37b1881484a8b877bec2a8eade43222b 233 SUPERFAMILY SSF54523 62 222 1.77E-23 T 11-10-2018 IX88_09840 37b1881484a8b877bec2a8eade43222b 233 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 29 49 5.3E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_12130 554f77041476054b14efb013466dc8cc 160 SUPERFAMILY SSF69765 4 159 6.93E-66 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 IX88_12130 554f77041476054b14efb013466dc8cc 160 Gene3D G3DSA:3.30.1330.50 2 160 2.6E-68 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 IX88_12130 554f77041476054b14efb013466dc8cc 160 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6 159 2.3E-67 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 IX88_12130 554f77041476054b14efb013466dc8cc 160 Pfam PF02542 YgbB family 5 158 8.6E-67 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 IX88_12130 554f77041476054b14efb013466dc8cc 160 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 39 54 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 IX88_12130 554f77041476054b14efb013466dc8cc 160 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 5 160 35.725 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 IX88_16440 cd03f7c1fc97a9b0335b268dd0be8057 301 Gene3D G3DSA:3.40.50.620 21 271 2.4E-46 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_16440 cd03f7c1fc97a9b0335b268dd0be8057 301 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 17 279 55.535 T 11-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 IX88_16440 cd03f7c1fc97a9b0335b268dd0be8057 301 Pfam PF01171 PP-loop family 49 212 2.7E-15 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 IX88_16440 cd03f7c1fc97a9b0335b268dd0be8057 301 SUPERFAMILY SSF52402 26 244 1.61E-54 T 11-10-2018 IX88_16440 cd03f7c1fc97a9b0335b268dd0be8057 301 PIRSF PIRSF004976 5 289 4.4E-70 T 11-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 IX88_08200 4efd678bd0a59155227e4e1526ad4a3b 420 Pfam PF02601 Exonuclease VII, large subunit 137 362 2.0E-45 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 IX88_08200 4efd678bd0a59155227e4e1526ad4a3b 420 Pfam PF13742 OB-fold nucleic acid binding domain 6 113 8.1E-14 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 IX88_08200 4efd678bd0a59155227e4e1526ad4a3b 420 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 8 413 1.4E-69 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 IX88_10245 e1c0dfb7dcd9047acc309d2d9d32a702 295 Pfam PF01925 Sulfite exporter TauE/SafE 7 264 5.4E-48 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 IX88_07260 064ed7e8f6c4cc51df93f11ed65d7418 213 Pfam PF01545 Cation efflux family 24 200 7.8E-14 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 IX88_07260 064ed7e8f6c4cc51df93f11ed65d7418 213 Gene3D G3DSA:1.20.1510.10 77 201 2.2E-7 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily IX88_07260 064ed7e8f6c4cc51df93f11ed65d7418 213 SUPERFAMILY SSF161111 19 200 5.36E-36 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily IX88_03345 be94f7d02dc3737dba084644be61c351 361 SUPERFAMILY SSF53597 148 352 1.78E-52 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 IX88_03345 be94f7d02dc3737dba084644be61c351 361 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 IX88_03345 be94f7d02dc3737dba084644be61c351 361 PIRSF PIRSF006769 2 359 2.5E-123 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 IX88_03345 be94f7d02dc3737dba084644be61c351 361 Gene3D G3DSA:3.40.430.10 145 361 3.7E-73 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 IX88_03345 be94f7d02dc3737dba084644be61c351 361 SUPERFAMILY SSF53927 7 148 6.19E-49 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 IX88_03345 be94f7d02dc3737dba084644be61c351 361 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 150 353 4.1E-50 T 11-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 IX88_03345 be94f7d02dc3737dba084644be61c351 361 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 11 351 9.8E-118 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 IX88_03345 be94f7d02dc3737dba084644be61c351 361 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 103 1.1E-22 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain IX88_03345 be94f7d02dc3737dba084644be61c351 361 Pfam PF01872 RibD C-terminal domain 151 350 4.1E-43 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 IX88_03345 be94f7d02dc3737dba084644be61c351 361 Gene3D G3DSA:3.40.140.10 1 144 6.1E-50 T 11-10-2018 IX88_08795 774498c8db6da7549f139d4364ad672d 300 Pfam PF00682 HMGL-like 5 277 7.4E-53 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 IX88_08795 774498c8db6da7549f139d4364ad672d 300 SUPERFAMILY SSF51569 2 290 2.2E-69 T 11-10-2018 IX88_08795 774498c8db6da7549f139d4364ad672d 300 Gene3D G3DSA:3.20.20.70 1 298 3.1E-125 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_17440 35a0985eaadd4909d9ab34b05b93772b 336 SMART SM00342 248 330 3.7E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_17440 35a0985eaadd4909d9ab34b05b93772b 336 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 204 3.9E-49 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal IX88_17440 35a0985eaadd4909d9ab34b05b93772b 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 330 1.8E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_17440 35a0985eaadd4909d9ab34b05b93772b 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 314 1.8E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_17440 35a0985eaadd4909d9ab34b05b93772b 336 SUPERFAMILY SSF46689 283 331 2.96E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_17440 35a0985eaadd4909d9ab34b05b93772b 336 Pfam PF12833 Helix-turn-helix domain 255 331 2.2E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_17440 35a0985eaadd4909d9ab34b05b93772b 336 Gene3D G3DSA:1.10.10.60 227 334 1.0E-25 T 11-10-2018 IX88_01360 2c2e598da9c911128cab4d2da073ab5d 310 SMART SM00937 30 140 1.6E-58 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 IX88_01360 2c2e598da9c911128cab4d2da073ab5d 310 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 308 6.7E-145 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 IX88_01360 2c2e598da9c911128cab4d2da073ab5d 310 Gene3D G3DSA:3.30.160.20 171 266 3.5E-96 T 11-10-2018 IX88_01360 2c2e598da9c911128cab4d2da073ab5d 310 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 310 33.237 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 IX88_01360 2c2e598da9c911128cab4d2da073ab5d 310 SUPERFAMILY SSF75620 2 307 1.7E-125 T 11-10-2018 IX88_01360 2c2e598da9c911128cab4d2da073ab5d 310 Pfam PF00472 RF-1 domain 173 282 1.1E-40 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 IX88_01360 2c2e598da9c911128cab4d2da073ab5d 310 Gene3D G3DSA:1.20.58.410 1 61 4.3E-10 T 11-10-2018 IX88_01360 2c2e598da9c911128cab4d2da073ab5d 310 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 190 206 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 IX88_01360 2c2e598da9c911128cab4d2da073ab5d 310 Gene3D G3DSA:3.30.70.1660 75 303 3.5E-96 T 11-10-2018 IX88_01360 2c2e598da9c911128cab4d2da073ab5d 310 Pfam PF03462 PCRF domain 2 165 5.0E-53 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 IX88_07010 4c5ffbb6fe067b3374b4be62de78e436 485 Pfam PF14052 Capsule assembly protein Wzi 89 471 1.6E-115 T 11-10-2018 IPR026950 Capsule assembly protein Wzi IX88_07010 4c5ffbb6fe067b3374b4be62de78e436 485 Gene3D G3DSA:2.40.160.130 22 480 2.9E-161 T 11-10-2018 IPR038636 Capsule assembly protein Wzi superfamily IX88_08970 32d52df4ece8da024e20ee8277908f4d 288 SMART SM00062 53 275 2.9E-69 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IX88_08970 32d52df4ece8da024e20ee8277908f4d 288 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 54 270 9.0E-51 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IX88_08970 32d52df4ece8da024e20ee8277908f4d 288 Gene3D G3DSA:3.40.190.10 48 268 1.7E-76 T 11-10-2018 IX88_08970 32d52df4ece8da024e20ee8277908f4d 288 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 76 89 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site IX88_08970 32d52df4ece8da024e20ee8277908f4d 288 SUPERFAMILY SSF53850 12 270 2.33E-58 T 11-10-2018 IX88_08970 32d52df4ece8da024e20ee8277908f4d 288 Gene3D G3DSA:3.40.190.10 143 233 1.7E-76 T 11-10-2018 IX88_14410 e43473124a11bbdedad2582a388a40dc 302 Gene3D G3DSA:3.40.50.10330 29 290 1.0E-89 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 IX88_14410 e43473124a11bbdedad2582a388a40dc 302 SUPERFAMILY SSF111331 10 293 7.33E-87 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily IX88_14410 e43473124a11bbdedad2582a388a40dc 302 Hamap MF_00361 NAD kinase [nadK]. 9 290 32.393 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 IX88_14410 e43473124a11bbdedad2582a388a40dc 302 Gene3D G3DSA:2.60.200.30 131 267 1.0E-89 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 IX88_14410 e43473124a11bbdedad2582a388a40dc 302 Pfam PF01513 ATP-NAD kinase 55 273 3.8E-63 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 IX88_01805 fe3d70dfb907a1f98c0c9491341f79f9 401 TIGRFAM TIGR01224 hutI: imidazolonepropionase 21 397 5.0E-152 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 IX88_01805 fe3d70dfb907a1f98c0c9491341f79f9 401 Gene3D G3DSA:3.20.20.140 61 359 1.9E-161 T 11-10-2018 IX88_01805 fe3d70dfb907a1f98c0c9491341f79f9 401 Gene3D G3DSA:2.30.40.10 7 396 1.9E-161 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 IX88_01805 fe3d70dfb907a1f98c0c9491341f79f9 401 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 399 43.902 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 IX88_01805 fe3d70dfb907a1f98c0c9491341f79f9 401 Pfam PF01979 Amidohydrolase family 57 397 2.4E-28 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 IX88_01805 fe3d70dfb907a1f98c0c9491341f79f9 401 SUPERFAMILY SSF51338 1 398 1.89E-31 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 IX88_01805 fe3d70dfb907a1f98c0c9491341f79f9 401 SUPERFAMILY SSF51556 60 360 2.67E-87 T 11-10-2018 IPR032466 Metal-dependent hydrolase IX88_06160 f83b0fd51bb0df23bbd7b7ae96c07e51 277 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 257 8.4E-77 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 IX88_06160 f83b0fd51bb0df23bbd7b7ae96c07e51 277 Gene3D G3DSA:3.30.70.890 158 275 8.9E-21 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily IX88_06160 f83b0fd51bb0df23bbd7b7ae96c07e51 277 PIRSF PIRSF010376 1 271 9.5E-80 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 IX88_06160 f83b0fd51bb0df23bbd7b7ae96c07e51 277 Pfam PF08544 GHMP kinases C terminal 204 253 1.2E-7 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain IX88_06160 f83b0fd51bb0df23bbd7b7ae96c07e51 277 SUPERFAMILY SSF54211 1 154 8.35E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_06160 f83b0fd51bb0df23bbd7b7ae96c07e51 277 SUPERFAMILY SSF55060 156 271 3.07E-23 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily IX88_06160 f83b0fd51bb0df23bbd7b7ae96c07e51 277 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 2 262 30.741 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 IX88_06160 f83b0fd51bb0df23bbd7b7ae96c07e51 277 Gene3D G3DSA:3.30.230.10 1 155 1.5E-58 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IX88_06160 f83b0fd51bb0df23bbd7b7ae96c07e51 277 Pfam PF00288 GHMP kinases N terminal domain 83 140 2.9E-12 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 IX88_06535 4653a1d72065e9d92bb7f7584adaba33 485 Gene3D G3DSA:1.20.1260.30 1 122 9.8E-37 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily IX88_06535 4653a1d72065e9d92bb7f7584adaba33 485 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 295 319 1.8E-22 T 11-10-2018 IX88_06535 4653a1d72065e9d92bb7f7584adaba33 485 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 172 186 1.8E-22 T 11-10-2018 IX88_06535 4653a1d72065e9d92bb7f7584adaba33 485 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 148 164 1.8E-22 T 11-10-2018 IX88_06535 4653a1d72065e9d92bb7f7584adaba33 485 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 253 265 1.8E-22 T 11-10-2018 IX88_06535 4653a1d72065e9d92bb7f7584adaba33 485 Pfam PF12161 HsdM N-terminal domain 6 115 6.1E-14 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain IX88_06535 4653a1d72065e9d92bb7f7584adaba33 485 SUPERFAMILY SSF53335 5 478 1.55E-120 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_06535 4653a1d72065e9d92bb7f7584adaba33 485 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 256 262 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 IX88_06535 4653a1d72065e9d92bb7f7584adaba33 485 Gene3D G3DSA:3.40.50.150 125 458 4.4E-89 T 11-10-2018 IX88_06535 4653a1d72065e9d92bb7f7584adaba33 485 Pfam PF02384 N-6 DNA Methylase 126 435 6.3E-74 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 IX88_08100 ac6dfa1aa0729fd24450a40a01f5d3ab 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 7.4E-105 T 11-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 IX88_08100 ac6dfa1aa0729fd24450a40a01f5d3ab 187 Gene3D G3DSA:3.40.30.10 1 186 3.3E-65 T 11-10-2018 IX88_08100 ac6dfa1aa0729fd24450a40a01f5d3ab 187 SUPERFAMILY SSF52833 1 186 2.87E-59 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_08100 ac6dfa1aa0729fd24450a40a01f5d3ab 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 4.9E-6 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 IX88_08100 ac6dfa1aa0729fd24450a40a01f5d3ab 187 Pfam PF00578 AhpC/TSA family 5 132 2.5E-35 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 IX88_08100 ac6dfa1aa0729fd24450a40a01f5d3ab 187 PIRSF PIRSF000239 1 187 1.4E-55 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 IX88_04125 906ba7e30f469d9822698f09ee4ecb02 291 Gene3D G3DSA:3.90.1280.10 231 288 2.1E-18 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 IX88_04125 906ba7e30f469d9822698f09ee4ecb02 291 Gene3D G3DSA:1.10.287.480 183 230 1.2E-17 T 11-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily IX88_04125 906ba7e30f469d9822698f09ee4ecb02 291 SUPERFAMILY SSF118352 231 287 2.09E-15 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 IX88_04125 906ba7e30f469d9822698f09ee4ecb02 291 Gene3D G3DSA:3.55.30.10 1 175 2.4E-50 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 IX88_04125 906ba7e30f469d9822698f09ee4ecb02 291 Pfam PF01430 Hsp33 protein 5 278 4.9E-73 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 IX88_04125 906ba7e30f469d9822698f09ee4ecb02 291 PIRSF PIRSF005261 1 289 1.2E-63 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 IX88_04125 906ba7e30f469d9822698f09ee4ecb02 291 SUPERFAMILY SSF64397 2 239 2.22E-61 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 IX88_01395 5e08ff00080edc69226e1cccabf33c91 265 SMART SM00849 32 229 8.7E-19 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_01395 5e08ff00080edc69226e1cccabf33c91 265 SUPERFAMILY SSF56281 30 249 7.14E-32 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_01395 5e08ff00080edc69226e1cccabf33c91 265 Gene3D G3DSA:3.60.15.10 9 248 8.5E-36 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_01395 5e08ff00080edc69226e1cccabf33c91 265 Pfam PF00753 Metallo-beta-lactamase superfamily 31 229 4.0E-16 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_04280 24cf2be84c52f941db9a13fbb96f2b14 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 8.9E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_04280 24cf2be84c52f941db9a13fbb96f2b14 298 Pfam PF03466 LysR substrate binding domain 88 290 6.3E-34 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_04280 24cf2be84c52f941db9a13fbb96f2b14 298 Gene3D G3DSA:3.40.190.290 93 289 2.4E-59 T 11-10-2018 IX88_04280 24cf2be84c52f941db9a13fbb96f2b14 298 SUPERFAMILY SSF46785 4 87 5.05E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_04280 24cf2be84c52f941db9a13fbb96f2b14 298 Gene3D G3DSA:1.10.10.10 3 92 2.7E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_04280 24cf2be84c52f941db9a13fbb96f2b14 298 SUPERFAMILY SSF53850 89 292 4.89E-38 T 11-10-2018 IX88_07750 c3b0cfb6318df57f4d51c25c127a9463 444 SUPERFAMILY SSF51604 137 444 1.34E-77 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily IX88_07750 c3b0cfb6318df57f4d51c25c127a9463 444 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 4 444 2.2E-262 T 11-10-2018 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499 IX88_07750 c3b0cfb6318df57f4d51c25c127a9463 444 SMART SM00922 183 283 2.0E-15 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal IX88_07750 c3b0cfb6318df57f4d51c25c127a9463 444 Gene3D G3DSA:3.20.20.120 137 398 1.5E-176 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily IX88_07750 c3b0cfb6318df57f4d51c25c127a9463 444 SUPERFAMILY SSF54826 5 135 1.21E-28 T 11-10-2018 IX88_07750 c3b0cfb6318df57f4d51c25c127a9463 444 Gene3D G3DSA:3.30.390.10 9 412 1.5E-176 T 11-10-2018 IPR029017 Enolase-like, N-terminal IX88_07750 c3b0cfb6318df57f4d51c25c127a9463 444 Pfam PF13378 Enolase C-terminal domain-like 187 403 7.5E-36 T 11-10-2018 IPR029065 Enolase C-terminal domain-like IX88_13910 9d096f1487bba9dd15d4c75c7c2254a9 321 SUPERFAMILY SSF51735 99 286 1.72E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_13910 9d096f1487bba9dd15d4c75c7c2254a9 321 Gene3D G3DSA:3.40.50.720 3 312 1.3E-101 T 11-10-2018 IX88_13910 9d096f1487bba9dd15d4c75c7c2254a9 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 285 5.1E-55 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 IX88_13910 9d096f1487bba9dd15d4c75c7c2254a9 321 Gene3D G3DSA:3.40.50.720 96 285 1.3E-101 T 11-10-2018 IX88_13910 9d096f1487bba9dd15d4c75c7c2254a9 321 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 175 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 IX88_13910 9d096f1487bba9dd15d4c75c7c2254a9 321 SUPERFAMILY SSF52283 1 132 9.45E-26 T 11-10-2018 IX88_13910 9d096f1487bba9dd15d4c75c7c2254a9 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 317 2.5E-25 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 IX88_12055 3b54ada6878b031591c6513f28e0031a 356 Gene3D G3DSA:2.160.10.10 103 312 8.5E-71 T 11-10-2018 IX88_12055 3b54ada6878b031591c6513f28e0031a 356 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 26 92 1.9E-17 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 IX88_12055 3b54ada6878b031591c6513f28e0031a 356 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 10 328 3.8E-104 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 IX88_12055 3b54ada6878b031591c6513f28e0031a 356 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 262 288 0.072 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_12055 3b54ada6878b031591c6513f28e0031a 356 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 112 144 1.8E-7 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_12055 3b54ada6878b031591c6513f28e0031a 356 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 225 260 2.4E-6 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_12055 3b54ada6878b031591c6513f28e0031a 356 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 148 183 9.1E-5 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_12055 3b54ada6878b031591c6513f28e0031a 356 Gene3D G3DSA:3.40.1390.10 1 102 6.7E-39 T 11-10-2018 IX88_12055 3b54ada6878b031591c6513f28e0031a 356 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 7 329 33.203 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 IX88_12055 3b54ada6878b031591c6513f28e0031a 356 SUPERFAMILY SSF51161 34 320 1.4E-71 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily IX88_04225 92834f81da93d563ca32d17bb8477e9e 136 SUPERFAMILY SSF51316 4 136 2.2E-44 T 11-10-2018 IPR011057 Mss4-like superfamily IX88_04225 92834f81da93d563ca32d17bb8477e9e 136 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 30 117 5.4E-23 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 IX88_04225 92834f81da93d563ca32d17bb8477e9e 136 Gene3D G3DSA:2.170.150.70 8 121 1.6E-17 T 11-10-2018 IX88_01670 90bb524a1f8efe4b9ab5b3a6b61b19ba 436 Pfam PF04286 Protein of unknown function (DUF445) 55 429 3.3E-72 T 11-10-2018 IPR007383 Protein of unknown function DUF445 IX88_10925 db52cd4fcaf0599bbc26b654ce57732b 753 Gene3D G3DSA:1.20.1580.10 545 583 5.4E-101 T 11-10-2018 IX88_10925 db52cd4fcaf0599bbc26b654ce57732b 753 Gene3D G3DSA:3.40.50.300 463 747 5.4E-101 T 11-10-2018 IX88_10925 db52cd4fcaf0599bbc26b654ce57732b 753 SUPERFAMILY SSF52540 6 416 6.82E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_10925 db52cd4fcaf0599bbc26b654ce57732b 753 Gene3D G3DSA:1.10.8.280 147 259 6.0E-154 T 11-10-2018 IX88_10925 db52cd4fcaf0599bbc26b654ce57732b 753 Pfam PF00005 ABC transporter 468 671 6.4E-11 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_10925 db52cd4fcaf0599bbc26b654ce57732b 753 Gene3D G3DSA:3.40.50.300 8 437 6.0E-154 T 11-10-2018 IX88_10925 db52cd4fcaf0599bbc26b654ce57732b 753 SUPERFAMILY SSF52540 458 717 3.38E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_10925 db52cd4fcaf0599bbc26b654ce57732b 753 Gene3D G3DSA:1.20.1580.10 93 337 6.0E-154 T 11-10-2018 IX88_01935 291b44eabac63cd9cad5c18cbfb6eea1 152 PIRSF PIRSF006173 3 152 2.8E-65 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 IX88_01935 291b44eabac63cd9cad5c18cbfb6eea1 152 Pfam PF03692 Putative zinc- or iron-chelating domain 29 97 2.6E-9 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein IX88_01935 291b44eabac63cd9cad5c18cbfb6eea1 152 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 7 152 37.341 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 IX88_02165 c226689de5198afdf8ff1ac8eae438f8 334 Gene3D G3DSA:3.40.190.170 31 238 3.0E-11 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily IX88_02165 c226689de5198afdf8ff1ac8eae438f8 334 SUPERFAMILY SSF53850 54 216 7.6E-5 T 11-10-2018 IX88_04020 f4b21d303b2e60ca75b02b111d878f99 949 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 4.7E-36 T 11-10-2018 IX88_04020 f4b21d303b2e60ca75b02b111d878f99 949 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 242 268 4.7E-36 T 11-10-2018 IX88_04020 f4b21d303b2e60ca75b02b111d878f99 949 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 310 322 4.7E-36 T 11-10-2018 IX88_04020 f4b21d303b2e60ca75b02b111d878f99 949 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 4.7E-36 T 11-10-2018 IX88_04020 f4b21d303b2e60ca75b02b111d878f99 949 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 4.7E-36 T 11-10-2018 IX88_04020 f4b21d303b2e60ca75b02b111d878f99 949 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 107 127 4.7E-36 T 11-10-2018 IX88_04020 f4b21d303b2e60ca75b02b111d878f99 949 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 798 924 9.8E-34 T 11-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein IX88_04020 f4b21d303b2e60ca75b02b111d878f99 949 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 105 1.5E-7 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_04020 f4b21d303b2e60ca75b02b111d878f99 949 Pfam PF00361 Proton-conducting membrane transporter 130 416 3.4E-63 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_04020 f4b21d303b2e60ca75b02b111d878f99 949 Pfam PF13244 Domain of unknown function (DUF4040) 624 685 7.2E-18 T 11-10-2018 IPR025383 Domain of unknown function DUF4040 IX88_04020 f4b21d303b2e60ca75b02b111d878f99 949 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 81 101 2.6E-5 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 IX88_04020 f4b21d303b2e60ca75b02b111d878f99 949 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 260 282 2.6E-5 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 IX88_11725 c4172463c366b69c2e10b1767f90f843 137 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 48 131 27.569 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS IX88_11725 c4172463c366b69c2e10b1767f90f843 137 SUPERFAMILY SSF54736 51 135 6.28E-31 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like IX88_11725 c4172463c366b69c2e10b1767f90f843 137 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 53 131 1.9E-32 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 IX88_11725 c4172463c366b69c2e10b1767f90f843 137 Gene3D G3DSA:3.30.1390.10 31 137 4.0E-40 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like IX88_01950 4c39905db794433f88a2c6273cdf286f 120 Gene3D G3DSA:3.30.428.10 1 119 2.9E-26 T 11-10-2018 IPR036265 HIT-like superfamily IX88_01950 4c39905db794433f88a2c6273cdf286f 120 SUPERFAMILY SSF54197 3 116 2.94E-28 T 11-10-2018 IPR036265 HIT-like superfamily IX88_01950 4c39905db794433f88a2c6273cdf286f 120 Pfam PF01230 HIT domain 16 105 2.4E-12 T 11-10-2018 IPR001310 Histidine triad (HIT) protein IX88_14085 b8fcfd9f8d185e5576eb7288f5b58eda 160 Gene3D G3DSA:1.10.3790.10 17 159 2.1E-6 T 11-10-2018 IPR036619 NinB superfamily IX88_14085 b8fcfd9f8d185e5576eb7288f5b58eda 160 SUPERFAMILY SSF103370 30 154 2.75E-5 T 11-10-2018 IPR036619 NinB superfamily IX88_12280 10eb8042ec03252beede5c11ddc49926 139 Gene3D G3DSA:2.40.50.100 62 136 6.3E-28 T 11-10-2018 IX88_12280 10eb8042ec03252beede5c11ddc49926 139 SUPERFAMILY SSF51230 66 136 5.5E-22 T 11-10-2018 IPR011053 Single hybrid motif IX88_12280 10eb8042ec03252beede5c11ddc49926 139 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 136 7.5E-38 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 IX88_12280 10eb8042ec03252beede5c11ddc49926 139 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 84 98 9.3E-15 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 IX88_12280 10eb8042ec03252beede5c11ddc49926 139 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 67 80 9.3E-15 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 IX88_12280 10eb8042ec03252beede5c11ddc49926 139 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 112 9.3E-15 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 IX88_12280 10eb8042ec03252beede5c11ddc49926 139 Pfam PF00364 Biotin-requiring enzyme 66 136 3.2E-21 T 11-10-2018 IPR000089 Biotin/lipoyl attachment IX88_00265 db5187bdfd029709a4460c05b65845d2 213 Pfam PF05494 MlaC protein 36 190 1.0E-36 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC IX88_00265 db5187bdfd029709a4460c05b65845d2 213 Gene3D G3DSA:3.10.450.710 27 207 4.4E-46 T 11-10-2018 IX88_00265 db5187bdfd029709a4460c05b65845d2 213 PIRSF PIRSF004649 1 213 2.8E-54 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC IX88_09675 0befd6783255979efd439b5b9ff58e26 124 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 123 36.725 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 IX88_09675 0befd6783255979efd439b5b9ff58e26 124 Gene3D G3DSA:2.40.50.100 1 124 5.2E-50 T 11-10-2018 IX88_09675 0befd6783255979efd439b5b9ff58e26 124 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 2 122 9.4E-51 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 IX88_09675 0befd6783255979efd439b5b9ff58e26 124 SUPERFAMILY SSF51230 3 122 3.04E-45 T 11-10-2018 IPR011053 Single hybrid motif IX88_09675 0befd6783255979efd439b5b9ff58e26 124 Pfam PF01597 Glycine cleavage H-protein 7 122 3.0E-46 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate IX88_09675 0befd6783255979efd439b5b9ff58e26 124 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 IX88_10685 c45a02e60b0662b88f1bbae3a765145f 176 SUPERFAMILY SSF50475 16 171 8.34E-47 T 11-10-2018 IX88_10685 c45a02e60b0662b88f1bbae3a765145f 176 Gene3D G3DSA:2.30.110.10 3 175 2.2E-46 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 IX88_10685 c45a02e60b0662b88f1bbae3a765145f 176 SMART SM00903 24 167 6.2E-58 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 IX88_10685 c45a02e60b0662b88f1bbae3a765145f 176 Pfam PF01613 Flavin reductase like domain 25 166 9.2E-33 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 IX88_12045 d448deb5b6200111a8cc45996b1c5250 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 19 47 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 IX88_12045 d448deb5b6200111a8cc45996b1c5250 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 7 261 5.9E-98 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 IX88_12045 d448deb5b6200111a8cc45996b1c5250 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 179 261 6.5E-25 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 IX88_12045 d448deb5b6200111a8cc45996b1c5250 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 16 51 1.7E-9 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_12045 d448deb5b6200111a8cc45996b1c5250 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 142 8.9E-7 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_12045 d448deb5b6200111a8cc45996b1c5250 262 Gene3D G3DSA:1.20.1180.10 196 262 7.5E-26 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 IX88_12045 d448deb5b6200111a8cc45996b1c5250 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 152 180 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 IX88_12045 d448deb5b6200111a8cc45996b1c5250 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 4 262 43.036 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 IX88_12045 d448deb5b6200111a8cc45996b1c5250 262 PIRSF PIRSF000456 4 262 1.4E-104 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 IX88_12045 d448deb5b6200111a8cc45996b1c5250 262 Gene3D G3DSA:2.160.10.10 1 195 2.3E-62 T 11-10-2018 IX88_12045 d448deb5b6200111a8cc45996b1c5250 262 SUPERFAMILY SSF51161 3 262 1.13E-78 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily IX88_07170 50a9d11c72833ddb084a487dbaaee609 159 Gene3D G3DSA:3.40.1280.10 1 158 3.1E-52 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IX88_07170 50a9d11c72833ddb084a487dbaaee609 159 PIRSF PIRSF004505 1 158 3.4E-50 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 IX88_07170 50a9d11c72833ddb084a487dbaaee609 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 158 2.1E-53 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 IX88_07170 50a9d11c72833ddb084a487dbaaee609 159 SUPERFAMILY SSF75217 1 156 9.42E-51 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases IX88_07170 50a9d11c72833ddb084a487dbaaee609 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 158 28.453 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 IX88_07170 50a9d11c72833ddb084a487dbaaee609 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 157 9.4E-51 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 IX88_13625 603a2c653e949b3c1d1a0dffe402928b 162 SUPERFAMILY SSF143744 26 159 1.07E-32 T 11-10-2018 IPR038084 GlcG-like domain superfamily IX88_13625 603a2c653e949b3c1d1a0dffe402928b 162 Gene3D G3DSA:3.30.450.150 19 159 1.2E-34 T 11-10-2018 IPR038084 GlcG-like domain superfamily IX88_13625 603a2c653e949b3c1d1a0dffe402928b 162 Pfam PF03928 Haem-degrading 31 157 5.3E-27 T 11-10-2018 IPR005624 Haem-degrading IX88_17330 900b52515000b249a0594b5b202efe91 709 Gene3D G3DSA:2.170.130.10 33 172 2.4E-19 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_17330 900b52515000b249a0594b5b202efe91 709 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 160 6.6E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_17330 900b52515000b249a0594b5b202efe91 709 Pfam PF00593 TonB dependent receptor 236 705 4.1E-48 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_17330 900b52515000b249a0594b5b202efe91 709 Gene3D G3DSA:2.40.170.20 176 705 6.2E-92 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IX88_17330 900b52515000b249a0594b5b202efe91 709 SUPERFAMILY SSF56935 32 705 8.55E-115 T 11-10-2018 IX88_18150 b989f7e84ea3defe7895f2f627dec5bf 230 Pfam PF00881 Nitroreductase family 40 208 3.2E-14 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 IX88_18150 b989f7e84ea3defe7895f2f627dec5bf 230 Gene3D G3DSA:3.40.109.10 33 230 3.0E-83 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IX88_18150 b989f7e84ea3defe7895f2f627dec5bf 230 SUPERFAMILY SSF55469 35 230 2.75E-69 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IX88_03075 80ab3c8907698cc7cf2bf8d805b395d5 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 19.495 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03075 80ab3c8907698cc7cf2bf8d805b395d5 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 17 89 2.0E-33 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03075 80ab3c8907698cc7cf2bf8d805b395d5 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 3.1E-29 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03075 80ab3c8907698cc7cf2bf8d805b395d5 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 1.8E-40 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03075 80ab3c8907698cc7cf2bf8d805b395d5 139 Gene3D G3DSA:2.60.15.10 2 89 3.6E-29 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03075 80ab3c8907698cc7cf2bf8d805b395d5 139 SUPERFAMILY SSF51344 3 85 4.32E-25 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03075 80ab3c8907698cc7cf2bf8d805b395d5 139 Gene3D G3DSA:1.20.5.440 90 132 1.8E-7 T 11-10-2018 IX88_03075 80ab3c8907698cc7cf2bf8d805b395d5 139 SUPERFAMILY SSF46604 87 135 1.33E-10 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_17805 6846f0c9a3aeecc4f68e5f1efa0f62bf 104 SMART SM00450 2 99 2.8E-11 T 11-10-2018 IPR001763 Rhodanese-like domain IX88_17805 6846f0c9a3aeecc4f68e5f1efa0f62bf 104 SUPERFAMILY SSF52821 14 103 4.32E-19 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily IX88_17805 6846f0c9a3aeecc4f68e5f1efa0f62bf 104 Gene3D G3DSA:3.40.250.10 11 104 2.0E-18 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily IX88_17805 6846f0c9a3aeecc4f68e5f1efa0f62bf 104 Pfam PF00581 Rhodanese-like domain 16 91 4.6E-9 T 11-10-2018 IPR001763 Rhodanese-like domain IX88_11550 c3ac26d74e9b578bbcb304bdcc4a5a46 270 Gene3D G3DSA:3.30.450.40 91 270 1.4E-49 T 11-10-2018 IPR029016 GAF-like domain superfamily IX88_11550 c3ac26d74e9b578bbcb304bdcc4a5a46 270 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 19 270 4.7E-96 T 11-10-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 IX88_11550 c3ac26d74e9b578bbcb304bdcc4a5a46 270 Pfam PF09339 IclR helix-turn-helix domain 27 76 2.2E-12 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 IX88_11550 c3ac26d74e9b578bbcb304bdcc4a5a46 270 Pfam PF01614 Bacterial transcriptional regulator 144 267 9.4E-42 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal IX88_11550 c3ac26d74e9b578bbcb304bdcc4a5a46 270 SUPERFAMILY SSF46785 26 93 2.61E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_11550 c3ac26d74e9b578bbcb304bdcc4a5a46 270 SMART SM00346 23 111 8.1E-17 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 IX88_11550 c3ac26d74e9b578bbcb304bdcc4a5a46 270 SUPERFAMILY SSF55781 92 270 1.11E-40 T 11-10-2018 IX88_11550 c3ac26d74e9b578bbcb304bdcc4a5a46 270 Gene3D G3DSA:1.10.10.10 8 88 1.9E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_01100 21eac6d9183b7def8e7309041d02f46f 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 279 5.3E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_01100 21eac6d9183b7def8e7309041d02f46f 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 279 295 5.3E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_01100 21eac6d9183b7def8e7309041d02f46f 300 Pfam PF12833 Helix-turn-helix domain 222 296 4.5E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_01100 21eac6d9183b7def8e7309041d02f46f 300 SMART SM00342 211 295 3.4E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_01100 21eac6d9183b7def8e7309041d02f46f 300 Gene3D G3DSA:1.10.10.60 193 298 4.2E-21 T 11-10-2018 IX88_01100 21eac6d9183b7def8e7309041d02f46f 300 SUPERFAMILY SSF46689 251 297 1.12E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_15310 af15657424005ef0feea8f061a39ef39 338 PIRSF PIRSF004911 3 337 4.8E-108 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase IX88_15310 af15657424005ef0feea8f061a39ef39 338 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 11 332 3.9E-133 T 11-10-2018 IPR022462 Lysine-2,3-aminomutase-like IX88_15310 af15657424005ef0feea8f061a39ef39 338 Pfam PF04055 Radical SAM superfamily 113 214 5.3E-8 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 IX88_15310 af15657424005ef0feea8f061a39ef39 338 TIGRFAM TIGR00238 TIGR00238: KamA family protein 8 325 2.4E-96 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase IX88_15310 af15657424005ef0feea8f061a39ef39 338 Gene3D G3DSA:3.20.20.70 46 331 5.7E-85 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_15310 af15657424005ef0feea8f061a39ef39 338 Pfam PF13394 4Fe-4S single cluster domain 114 178 1.5E-5 T 11-10-2018 IX88_15310 af15657424005ef0feea8f061a39ef39 338 SUPERFAMILY SSF102114 98 321 4.32E-21 T 11-10-2018 IX88_00200 89e5f19cf45b36cd88157dda3d41becd 258 Pfam PF01926 50S ribosome-binding GTPase 63 176 2.9E-18 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_00200 89e5f19cf45b36cd88157dda3d41becd 258 SUPERFAMILY SSF52540 53 238 3.44E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_00200 89e5f19cf45b36cd88157dda3d41becd 258 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 44 229 6.7E-73 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 IX88_00200 89e5f19cf45b36cd88157dda3d41becd 258 Gene3D G3DSA:3.40.50.300 38 236 3.0E-49 T 11-10-2018 IX88_00200 89e5f19cf45b36cd88157dda3d41becd 258 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 49 233 26.87 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 IX88_12375 48a312a5aca6af11543673f906295005 268 Pfam PF05100 Phage minor tail protein L 64 267 1.9E-63 T 11-10-2018 IPR006487 Bacteriophage lambda, GpL, minor tail IX88_12375 48a312a5aca6af11543673f906295005 268 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 75 266 7.9E-55 T 11-10-2018 IPR006487 Bacteriophage lambda, GpL, minor tail IX88_06800 a9e4afdc333be483bf3d59e82b4a95f2 398 SUPERFAMILY SSF56935 38 369 1.24E-10 T 11-10-2018 IX88_10520 78d62991de39d0a116855c44e6e40243 284 SUPERFAMILY SSF46689 185 235 3.05E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_10520 78d62991de39d0a116855c44e6e40243 284 Gene3D G3DSA:1.10.10.60 235 284 1.5E-17 T 11-10-2018 IX88_10520 78d62991de39d0a116855c44e6e40243 284 SUPERFAMILY SSF46689 237 284 5.82E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_10520 78d62991de39d0a116855c44e6e40243 284 Pfam PF12833 Helix-turn-helix domain 207 284 2.8E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_10520 78d62991de39d0a116855c44e6e40243 284 SMART SM00342 201 284 1.2E-33 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_10520 78d62991de39d0a116855c44e6e40243 284 Gene3D G3DSA:1.10.10.60 184 234 6.7E-15 T 11-10-2018 IX88_10520 78d62991de39d0a116855c44e6e40243 284 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 238 280 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 IX88_13085 b407e89963438c7bc3c5beda0891931d 239 SUPERFAMILY SSF56300 2 226 2.07E-25 T 11-10-2018 IX88_13085 b407e89963438c7bc3c5beda0891931d 239 Pfam PF00149 Calcineurin-like phosphoesterase 3 197 2.0E-5 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 IX88_13085 b407e89963438c7bc3c5beda0891931d 239 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 226 7.4E-71 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 IX88_13085 b407e89963438c7bc3c5beda0891931d 239 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 239 91.111 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 IX88_06960 e4ac0a5c99af28258c458ae9eebb5f52 225 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 8 223 1.2E-95 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_06960 e4ac0a5c99af28258c458ae9eebb5f52 225 Gene3D G3DSA:1.10.3810.10 50 224 2.8E-58 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_06960 e4ac0a5c99af28258c458ae9eebb5f52 225 SUPERFAMILY SSF53955 51 221 6.19E-60 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily IX88_06960 e4ac0a5c99af28258c458ae9eebb5f52 225 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 4 224 36.973 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_06960 e4ac0a5c99af28258c458ae9eebb5f52 225 Pfam PF00912 Transglycosylase 55 218 2.6E-55 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_00610 38f7d3d323e5efece8e025ef7718baef 184 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 30 1.0E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_00610 38f7d3d323e5efece8e025ef7718baef 184 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 9 144 3.2E-21 T 11-10-2018 IPR013362 Pilus modification type IV, PilV IX88_16530 9f06d4688924f0b08f0a31beb95ba03c 282 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 281 35.194 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IX88_16530 9f06d4688924f0b08f0a31beb95ba03c 282 SUPERFAMILY SSF51735 127 278 1.71E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_16530 9f06d4688924f0b08f0a31beb95ba03c 282 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 120 1.6E-38 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IX88_16530 9f06d4688924f0b08f0a31beb95ba03c 282 Gene3D G3DSA:3.40.50.10860 7 275 3.7E-102 T 11-10-2018 IX88_16530 9f06d4688924f0b08f0a31beb95ba03c 282 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 127 280 2.5E-61 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IX88_16530 9f06d4688924f0b08f0a31beb95ba03c 282 Gene3D G3DSA:3.40.50.720 5 257 3.7E-102 T 11-10-2018 IX88_16530 9f06d4688924f0b08f0a31beb95ba03c 282 SUPERFAMILY SSF53223 2 121 6.04E-38 T 11-10-2018 IX88_16530 9f06d4688924f0b08f0a31beb95ba03c 282 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 258 266 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IX88_16530 9f06d4688924f0b08f0a31beb95ba03c 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.6E-62 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IX88_16530 9f06d4688924f0b08f0a31beb95ba03c 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 1.6E-62 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IX88_16530 9f06d4688924f0b08f0a31beb95ba03c 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 1.6E-62 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IX88_16530 9f06d4688924f0b08f0a31beb95ba03c 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 254 272 1.6E-62 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IX88_16530 9f06d4688924f0b08f0a31beb95ba03c 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.6E-62 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IX88_16530 9f06d4688924f0b08f0a31beb95ba03c 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 237 253 1.6E-62 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IX88_16530 9f06d4688924f0b08f0a31beb95ba03c 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.6E-62 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 IX88_01845 4b38f3dab71dc69e24740e036394ca06 227 Gene3D G3DSA:3.30.1380.10 79 216 5.6E-7 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 IX88_01845 4b38f3dab71dc69e24740e036394ca06 227 Pfam PF08291 Peptidase M15 103 180 8.0E-9 T 11-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 IX88_01845 4b38f3dab71dc69e24740e036394ca06 227 SUPERFAMILY SSF55166 81 220 2.51E-16 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 IX88_17210 6a5e7a58c9add605562146750ee0be35 167 SUPERFAMILY SSF141523 8 161 3.27E-22 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like IX88_17210 6a5e7a58c9add605562146750ee0be35 167 Gene3D G3DSA:2.40.440.10 3 167 9.3E-24 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like IX88_17210 6a5e7a58c9add605562146750ee0be35 167 Pfam PF03734 L,D-transpeptidase catalytic domain 11 157 7.7E-15 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 IX88_10025 702a3f22f91027b71c678b51c159467a 313 SUPERFAMILY SSF54909 7 310 3.04E-97 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel IX88_10025 702a3f22f91027b71c678b51c159467a 313 Pfam PF04261 Dyp-type peroxidase family 9 306 6.7E-76 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 IX88_10025 702a3f22f91027b71c678b51c159467a 313 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 16 306 8.6E-72 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 IX88_15970 62442204d090043a734f79b53279969c 444 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 35 419 3.9E-101 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 IX88_15970 62442204d090043a734f79b53279969c 444 SUPERFAMILY SSF55031 224 331 9.29E-26 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain IX88_15970 62442204d090043a734f79b53279969c 444 Gene3D G3DSA:3.30.70.360 221 336 4.8E-128 T 11-10-2018 IX88_15970 62442204d090043a734f79b53279969c 444 Gene3D G3DSA:3.40.630.10 34 416 4.8E-128 T 11-10-2018 IX88_15970 62442204d090043a734f79b53279969c 444 Pfam PF07687 Peptidase dimerisation domain 226 321 2.1E-12 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain IX88_15970 62442204d090043a734f79b53279969c 444 SUPERFAMILY SSF53187 22 430 1.37E-78 T 11-10-2018 IX88_15970 62442204d090043a734f79b53279969c 444 PIRSF PIRSF005962 20 435 6.2E-112 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 IX88_15970 62442204d090043a734f79b53279969c 444 Pfam PF01546 Peptidase family M20/M25/M40 92 427 1.7E-32 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 IX88_03910 cde8791f317a28a241b166bc2bc0a36c 108 Pfam PF06865 Protein of unknown function (DUF1255) 13 105 1.5E-32 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 IX88_03910 cde8791f317a28a241b166bc2bc0a36c 108 Gene3D G3DSA:2.60.120.10 1 108 3.7E-47 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_03910 cde8791f317a28a241b166bc2bc0a36c 108 SUPERFAMILY SSF51182 13 105 1.08E-30 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_03910 cde8791f317a28a241b166bc2bc0a36c 108 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 12 107 25.159 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 IX88_16815 dbec8da8eaa414a3cfd754fc53e0b7ce 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_16815 dbec8da8eaa414a3cfd754fc53e0b7ce 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 27.627 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_16815 dbec8da8eaa414a3cfd754fc53e0b7ce 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.4E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_16815 dbec8da8eaa414a3cfd754fc53e0b7ce 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.4E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_16815 dbec8da8eaa414a3cfd754fc53e0b7ce 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.4E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_16815 dbec8da8eaa414a3cfd754fc53e0b7ce 85 Gene3D G3DSA:2.40.50.100 21 85 6.4E-30 T 11-10-2018 IX88_16815 dbec8da8eaa414a3cfd754fc53e0b7ce 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_16815 dbec8da8eaa414a3cfd754fc53e0b7ce 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 6.4E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_16815 dbec8da8eaa414a3cfd754fc53e0b7ce 85 SUPERFAMILY SSF110324 2 80 2.02E-33 T 11-10-2018 IX88_16815 dbec8da8eaa414a3cfd754fc53e0b7ce 85 Pfam PF01016 Ribosomal L27 protein 2 82 2.2E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_01105 72b20074599ea6be417fb789e60fee77 333 SUPERFAMILY SSF51430 1 317 4.85E-101 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily IX88_01105 72b20074599ea6be417fb789e60fee77 333 Gene3D G3DSA:3.20.20.100 1 332 4.0E-117 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily IX88_01105 72b20074599ea6be417fb789e60fee77 333 Pfam PF00248 Aldo/keto reductase family 16 313 4.3E-76 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain IX88_06035 6f3cd5fe02edd7244d098f1ddfe21b68 218 Pfam PF13500 AAA domain 6 178 2.3E-34 T 11-10-2018 IX88_06035 6f3cd5fe02edd7244d098f1ddfe21b68 218 Gene3D G3DSA:3.40.50.300 1 206 1.3E-55 T 11-10-2018 IX88_06035 6f3cd5fe02edd7244d098f1ddfe21b68 218 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 215 25.406 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 IX88_06035 6f3cd5fe02edd7244d098f1ddfe21b68 218 SUPERFAMILY SSF52540 1 201 3.25E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_06035 6f3cd5fe02edd7244d098f1ddfe21b68 218 PIRSF PIRSF006755 3 216 5.8E-59 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 IX88_06035 6f3cd5fe02edd7244d098f1ddfe21b68 218 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 176 2.2E-50 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 IX88_12975 c2142f1d23c29fd08efb0196ed0f52a2 228 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 79 3.9E-15 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 IX88_12975 c2142f1d23c29fd08efb0196ed0f52a2 228 SUPERFAMILY SSF52833 3 104 9.42E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_12975 c2142f1d23c29fd08efb0196ed0f52a2 228 Gene3D G3DSA:1.20.1050.10 88 225 7.0E-15 T 11-10-2018 IX88_12975 c2142f1d23c29fd08efb0196ed0f52a2 228 SUPERFAMILY SSF47616 78 225 6.96E-17 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IX88_12975 c2142f1d23c29fd08efb0196ed0f52a2 228 Pfam PF14497 Glutathione S-transferase, C-terminal domain 148 225 9.9E-8 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal IX88_12975 c2142f1d23c29fd08efb0196ed0f52a2 228 Gene3D G3DSA:3.40.30.10 1 87 2.1E-18 T 11-10-2018 IX88_15835 7c1bea3577a978d037c3cd92500cb542 138 Pfam PF03061 Thioesterase superfamily 47 122 4.4E-10 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 IX88_15835 7c1bea3577a978d037c3cd92500cb542 138 SUPERFAMILY SSF54637 22 135 3.32E-23 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_15835 7c1bea3577a978d037c3cd92500cb542 138 Gene3D G3DSA:3.10.129.10 4 137 3.2E-50 T 11-10-2018 IX88_05775 dbb05ccada4d9794622a8bc88bc05295 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 7.8E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IX88_05775 dbb05ccada4d9794622a8bc88bc05295 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 15 137 5.9E-47 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05775 dbb05ccada4d9794622a8bc88bc05295 180 SUPERFAMILY SSF54862 40 157 1.17E-26 T 11-10-2018 IX88_05775 dbb05ccada4d9794622a8bc88bc05295 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IX88_05775 dbb05ccada4d9794622a8bc88bc05295 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IX88_05775 dbb05ccada4d9794622a8bc88bc05295 180 Gene3D G3DSA:3.30.70.3270 31 174 1.3E-39 T 11-10-2018 IX88_05775 dbb05ccada4d9794622a8bc88bc05295 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 5 152 27.034 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_08630 72d8c1885ae2f32ef9dc0280da08bee0 198 Pfam PF02525 Flavodoxin-like fold 3 195 6.4E-40 T 11-10-2018 IPR003680 Flavodoxin-like fold IX88_08630 72d8c1885ae2f32ef9dc0280da08bee0 198 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 197 27.333 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 IX88_08630 72d8c1885ae2f32ef9dc0280da08bee0 198 SUPERFAMILY SSF52218 1 196 8.69E-49 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_08630 72d8c1885ae2f32ef9dc0280da08bee0 198 Gene3D G3DSA:3.40.50.360 2 197 4.3E-50 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_02650 cdcd54838027ca6e3ad2be1a280442d4 613 Gene3D G3DSA:3.40.720.10 246 554 2.9E-33 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 IX88_02650 cdcd54838027ca6e3ad2be1a280442d4 613 Pfam PF00884 Sulfatase 252 544 3.1E-36 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 IX88_02650 cdcd54838027ca6e3ad2be1a280442d4 613 SUPERFAMILY SSF53649 322 550 2.51E-15 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 IX88_17400 a1aed274cbe77d6ac0b35a8e986e0b75 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 IX88_17400 a1aed274cbe77d6ac0b35a8e986e0b75 391 SUPERFAMILY SSF53901 269 390 1.04E-39 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_17400 a1aed274cbe77d6ac0b35a8e986e0b75 391 PIRSF PIRSF000429 1 391 1.7E-117 T 11-10-2018 IPR002155 Thiolase GO:0016747 IX88_17400 a1aed274cbe77d6ac0b35a8e986e0b75 391 Gene3D G3DSA:3.40.47.10 126 388 1.9E-143 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_17400 a1aed274cbe77d6ac0b35a8e986e0b75 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 2.2E-89 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 IX88_17400 a1aed274cbe77d6ac0b35a8e986e0b75 391 SUPERFAMILY SSF53901 3 268 1.18E-82 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_17400 a1aed274cbe77d6ac0b35a8e986e0b75 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 IX88_17400 a1aed274cbe77d6ac0b35a8e986e0b75 391 Gene3D G3DSA:3.40.47.10 5 274 1.9E-143 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_17400 a1aed274cbe77d6ac0b35a8e986e0b75 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 5.1E-44 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 IX88_17400 a1aed274cbe77d6ac0b35a8e986e0b75 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 3.3E-131 T 11-10-2018 IPR002155 Thiolase GO:0016747 IX88_02500 772ce69098e22c069c27c1ed6ae05ab1 237 SUPERFAMILY SSF53335 14 230 1.53E-50 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_02500 772ce69098e22c069c27c1ed6ae05ab1 237 Gene3D G3DSA:3.40.50.150 10 234 5.9E-78 T 11-10-2018 IX88_02500 772ce69098e22c069c27c1ed6ae05ab1 237 Pfam PF13489 Methyltransferase domain 50 203 2.3E-25 T 11-10-2018 IX88_02500 772ce69098e22c069c27c1ed6ae05ab1 237 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 10 229 7.0E-90 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 IX88_02500 772ce69098e22c069c27c1ed6ae05ab1 237 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 10 235 37.886 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 IX88_01260 bfdbe2583d470337a779cbe318bf5670 568 SMART SM00267 399 567 1.4E-41 T 11-10-2018 IPR000160 GGDEF domain IX88_01260 bfdbe2583d470337a779cbe318bf5670 568 SUPERFAMILY SSF55073 415 566 4.94E-38 T 11-10-2018 IPR029787 Nucleotide cyclase IX88_01260 bfdbe2583d470337a779cbe318bf5670 568 Gene3D G3DSA:3.30.70.270 397 567 2.6E-46 T 11-10-2018 IX88_01260 bfdbe2583d470337a779cbe318bf5670 568 Pfam PF00990 Diguanylate cyclase, GGDEF domain 410 564 1.6E-39 T 11-10-2018 IPR000160 GGDEF domain IX88_01260 bfdbe2583d470337a779cbe318bf5670 568 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 406 567 1.4E-43 T 11-10-2018 IPR000160 GGDEF domain IX88_08800 b2fe239d9640c87d974ab3b0c9b4ae7d 663 SUPERFAMILY SSF51246 331 448 3.03E-37 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 IX88_08800 b2fe239d9640c87d974ab3b0c9b4ae7d 663 Gene3D G3DSA:2.40.50.100 580 658 6.6E-22 T 11-10-2018 IX88_08800 b2fe239d9640c87d974ab3b0c9b4ae7d 663 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 612 629 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IX88_08800 b2fe239d9640c87d974ab3b0c9b4ae7d 663 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.9E-45 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IX88_08800 b2fe239d9640c87d974ab3b0c9b4ae7d 663 SMART SM00878 336 443 7.8E-49 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IX88_08800 b2fe239d9640c87d974ab3b0c9b4ae7d 663 SUPERFAMILY SSF52440 1 113 5.11E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily IX88_08800 b2fe239d9640c87d974ab3b0c9b4ae7d 663 SUPERFAMILY SSF56059 83 347 4.24E-68 T 11-10-2018 IX88_08800 b2fe239d9640c87d974ab3b0c9b4ae7d 663 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IX88_08800 b2fe239d9640c87d974ab3b0c9b4ae7d 663 Pfam PF00364 Biotin-requiring enzyme 589 654 2.3E-15 T 11-10-2018 IPR000089 Biotin/lipoyl attachment IX88_08800 b2fe239d9640c87d974ab3b0c9b4ae7d 663 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 1.4E-36 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IX88_08800 b2fe239d9640c87d974ab3b0c9b4ae7d 663 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IX88_08800 b2fe239d9640c87d974ab3b0c9b4ae7d 663 SUPERFAMILY SSF51230 581 655 9.82E-20 T 11-10-2018 IPR011053 Single hybrid motif IX88_08800 b2fe239d9640c87d974ab3b0c9b4ae7d 663 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 9.2E-75 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 IX88_08800 b2fe239d9640c87d974ab3b0c9b4ae7d 663 Gene3D G3DSA:3.30.470.130 1 450 1.2E-195 T 11-10-2018 IX88_06185 96fad11b2784a340954300c1dfc71c66 385 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 7 252 35.631 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD IX88_06185 96fad11b2784a340954300c1dfc71c66 385 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 10 254 1.4E-76 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD IX88_06185 96fad11b2784a340954300c1dfc71c66 385 SUPERFAMILY SSF48452 43 122 1.94E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_06185 96fad11b2784a340954300c1dfc71c66 385 Pfam PF13525 Outer membrane lipoprotein 39 243 5.7E-61 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like IX88_06185 96fad11b2784a340954300c1dfc71c66 385 Gene3D G3DSA:1.25.40.10 40 261 5.9E-52 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_15670 872c5e71ca288c1864167233210426f0 348 Pfam PF03060 Nitronate monooxygenase 5 342 4.1E-68 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 IX88_15670 872c5e71ca288c1864167233210426f0 348 SUPERFAMILY SSF51412 3 341 5.19E-56 T 11-10-2018 IX88_15670 872c5e71ca288c1864167233210426f0 348 Gene3D G3DSA:3.20.20.70 1 345 4.9E-99 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_04505 78c1babcfa3d595f1402407f0367e119 659 SUPERFAMILY SSF52540 6 628 1.1E-122 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04505 78c1babcfa3d595f1402407f0367e119 659 Pfam PF13361 UvrD-like helicase C-terminal domain 278 597 1.8E-39 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 IX88_04505 78c1babcfa3d595f1402407f0367e119 659 Gene3D G3DSA:3.40.50.300 10 272 2.4E-70 T 11-10-2018 IX88_04505 78c1babcfa3d595f1402407f0367e119 659 Gene3D G3DSA:3.40.50.300 282 621 1.1E-66 T 11-10-2018 IX88_04505 78c1babcfa3d595f1402407f0367e119 659 Gene3D G3DSA:1.10.486.10 382 522 1.1E-66 T 11-10-2018 IX88_04505 78c1babcfa3d595f1402407f0367e119 659 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 270 2.4E-54 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 IX88_04505 78c1babcfa3d595f1402407f0367e119 659 Gene3D G3DSA:1.10.10.160 109 190 2.4E-70 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily IX88_08905 4cf118045df438fb633d929b71bc93c1 409 SMART SM00384 109 121 48.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 IX88_08905 4cf118045df438fb633d929b71bc93c1 409 SMART SM00384 131 143 64.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 IX88_08905 4cf118045df438fb633d929b71bc93c1 409 SMART SM00384 173 185 10.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 IX88_08905 4cf118045df438fb633d929b71bc93c1 409 SMART SM00384 302 314 48.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 IX88_08905 4cf118045df438fb633d929b71bc93c1 409 SMART SM00384 239 251 10.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 IX88_08905 4cf118045df438fb633d929b71bc93c1 409 SMART SM00384 346 358 48.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 IX88_08905 4cf118045df438fb633d929b71bc93c1 409 SMART SM00384 195 207 10.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 IX88_08905 4cf118045df438fb633d929b71bc93c1 409 SMART SM00384 152 164 64.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 IX88_08905 4cf118045df438fb633d929b71bc93c1 409 SMART SM00384 261 273 48.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 IX88_08905 4cf118045df438fb633d929b71bc93c1 409 SMART SM00384 368 380 10.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 IX88_08905 4cf118045df438fb633d929b71bc93c1 409 SMART SM00384 324 336 10.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 IX88_08905 4cf118045df438fb633d929b71bc93c1 409 SMART SM00384 217 229 48.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 IX88_08905 4cf118045df438fb633d929b71bc93c1 409 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 19 40 9.5E-10 T 11-10-2018 IPR019626 Stress-induced protein, KGG, repeat IX88_16085 9770728f61dd6bbc5df1275746b10fbd 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_16085 9770728f61dd6bbc5df1275746b10fbd 228 SMART SM00382 34 223 1.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_16085 9770728f61dd6bbc5df1275746b10fbd 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 223 6.1E-94 T 11-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 IX88_16085 9770728f61dd6bbc5df1275746b10fbd 228 SUPERFAMILY SSF52540 5 226 3.04E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_16085 9770728f61dd6bbc5df1275746b10fbd 228 Gene3D G3DSA:3.40.50.300 3 226 6.6E-66 T 11-10-2018 IX88_16085 9770728f61dd6bbc5df1275746b10fbd 228 Pfam PF00005 ABC transporter 26 174 1.4E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_04725 c3cf01a2ed4b1c7aab644e31f1044fdc 617 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 6 605 4.7E-298 T 11-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 IX88_04725 c3cf01a2ed4b1c7aab644e31f1044fdc 617 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 157 167 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 IX88_04725 c3cf01a2ed4b1c7aab644e31f1044fdc 617 Pfam PF00920 Dehydratase family 69 602 3.9E-163 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 IX88_04725 c3cf01a2ed4b1c7aab644e31f1044fdc 617 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 508 519 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 IX88_04725 c3cf01a2ed4b1c7aab644e31f1044fdc 617 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 4 606 58.176 T 11-10-2018 IX88_04725 c3cf01a2ed4b1c7aab644e31f1044fdc 617 Gene3D G3DSA:3.50.30.80 422 572 2.7E-48 T 11-10-2018 IX88_04725 c3cf01a2ed4b1c7aab644e31f1044fdc 617 SUPERFAMILY SSF52016 422 605 4.94E-53 T 11-10-2018 IX88_04725 c3cf01a2ed4b1c7aab644e31f1044fdc 617 SUPERFAMILY SSF143975 5 421 9.42E-148 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 IX88_18260 ec7013bc7af99935b03480892bc47b5e 208 SMART SM00363 98 162 4.3E-17 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_18260 ec7013bc7af99935b03480892bc47b5e 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_18260 ec7013bc7af99935b03480892bc47b5e 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 9.9E-32 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 IX88_18260 ec7013bc7af99935b03480892bc47b5e 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 35.198 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 IX88_18260 ec7013bc7af99935b03480892bc47b5e 208 Pfam PF01479 S4 domain 99 145 5.7E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_18260 ec7013bc7af99935b03480892bc47b5e 208 Gene3D G3DSA:3.10.290.10 97 193 7.8E-79 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 IX88_18260 ec7013bc7af99935b03480892bc47b5e 208 SMART SM01390 3 97 2.1E-47 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 IX88_18260 ec7013bc7af99935b03480892bc47b5e 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 1.3E-80 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 IX88_18260 ec7013bc7af99935b03480892bc47b5e 208 Gene3D G3DSA:1.10.1050.10 6 208 7.8E-79 T 11-10-2018 IX88_18260 ec7013bc7af99935b03480892bc47b5e 208 SUPERFAMILY SSF55174 2 208 8.24E-68 T 11-10-2018 IX88_00045 ec7013bc7af99935b03480892bc47b5e 208 SMART SM00363 98 162 4.3E-17 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00045 ec7013bc7af99935b03480892bc47b5e 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00045 ec7013bc7af99935b03480892bc47b5e 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 9.9E-32 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 IX88_00045 ec7013bc7af99935b03480892bc47b5e 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 35.198 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 IX88_00045 ec7013bc7af99935b03480892bc47b5e 208 Pfam PF01479 S4 domain 99 145 5.7E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00045 ec7013bc7af99935b03480892bc47b5e 208 Gene3D G3DSA:3.10.290.10 97 193 7.8E-79 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 IX88_00045 ec7013bc7af99935b03480892bc47b5e 208 SMART SM01390 3 97 2.1E-47 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 IX88_00045 ec7013bc7af99935b03480892bc47b5e 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 1.3E-80 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 IX88_00045 ec7013bc7af99935b03480892bc47b5e 208 Gene3D G3DSA:1.10.1050.10 6 208 7.8E-79 T 11-10-2018 IX88_00045 ec7013bc7af99935b03480892bc47b5e 208 SUPERFAMILY SSF55174 2 208 8.24E-68 T 11-10-2018 IX88_09620 e7eab865b423e456f356fcf8d5ce69f5 196 Pfam PF04264 YceI-like domain 26 188 3.9E-41 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like IX88_09620 e7eab865b423e456f356fcf8d5ce69f5 196 Gene3D G3DSA:2.40.128.110 24 190 5.5E-50 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily IX88_09620 e7eab865b423e456f356fcf8d5ce69f5 196 SMART SM00867 25 189 2.2E-66 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like IX88_09620 e7eab865b423e456f356fcf8d5ce69f5 196 SUPERFAMILY SSF101874 23 189 3.14E-51 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily IX88_16860 e776d2ccec16e1c626c7b5dd3d37eb04 116 Pfam PF01906 Putative heavy-metal-binding 1 103 3.9E-38 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 IX88_16860 e776d2ccec16e1c626c7b5dd3d37eb04 116 Gene3D G3DSA:3.30.110.70 2 109 4.0E-32 T 11-10-2018 IX88_16860 e776d2ccec16e1c626c7b5dd3d37eb04 116 SUPERFAMILY SSF117782 1 105 4.84E-37 T 11-10-2018 IPR035439 UPF0145 domain superfamily IX88_16860 e776d2ccec16e1c626c7b5dd3d37eb04 116 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 25.095 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 IX88_09085 3a0578a281e08cdbb2eb2b34a013b88c 283 Pfam PF01039 Carboxyl transferase domain 17 276 1.9E-17 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 IX88_09085 3a0578a281e08cdbb2eb2b34a013b88c 283 SUPERFAMILY SSF52096 8 232 2.49E-39 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_09085 3a0578a281e08cdbb2eb2b34a013b88c 283 Gene3D G3DSA:3.90.226.10 4 241 4.6E-53 T 11-10-2018 IX88_09085 3a0578a281e08cdbb2eb2b34a013b88c 283 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 12 282 1.2E-121 T 11-10-2018 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 IX88_04680 e725b7dbfad2b49ede035c0133b4c0f5 444 Gene3D G3DSA:3.10.50.40 149 245 6.9E-98 T 11-10-2018 IX88_04680 e725b7dbfad2b49ede035c0133b4c0f5 444 Gene3D G3DSA:3.30.70.1050 1 114 2.0E-35 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 IX88_04680 e725b7dbfad2b49ede035c0133b4c0f5 444 SUPERFAMILY SSF54534 101 241 2.75E-36 T 11-10-2018 IX88_04680 e725b7dbfad2b49ede035c0133b4c0f5 444 TIGRFAM TIGR00115 tig: trigger factor 12 419 5.7E-143 T 11-10-2018 IPR005215 Trigger factor GO:0015031 IX88_04680 e725b7dbfad2b49ede035c0133b4c0f5 444 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 235 8.2E-16 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain IX88_04680 e725b7dbfad2b49ede035c0133b4c0f5 444 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 6.7E-42 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 IX88_04680 e725b7dbfad2b49ede035c0133b4c0f5 444 SUPERFAMILY SSF109998 247 436 3.14E-44 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily IX88_04680 e725b7dbfad2b49ede035c0133b4c0f5 444 PIRSF PIRSF003095 1 441 1.2E-127 T 11-10-2018 IPR005215 Trigger factor GO:0015031 IX88_04680 e725b7dbfad2b49ede035c0133b4c0f5 444 SUPERFAMILY SSF102735 1 129 6.54E-38 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 IX88_04680 e725b7dbfad2b49ede035c0133b4c0f5 444 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 419 9.9E-36 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 IX88_04680 e725b7dbfad2b49ede035c0133b4c0f5 444 Hamap MF_00303 Trigger factor [tig]. 1 425 21.693 T 11-10-2018 IPR005215 Trigger factor GO:0015031 IX88_04680 e725b7dbfad2b49ede035c0133b4c0f5 444 Gene3D G3DSA:1.10.3120.10 115 424 6.9E-98 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 IX88_16810 ee46cd3678f151ba24260b5ae85f75b1 231 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 41 231 1.0E-23 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 IX88_16810 ee46cd3678f151ba24260b5ae85f75b1 231 Gene3D G3DSA:2.50.20.10 36 231 8.6E-51 T 11-10-2018 IX88_16810 ee46cd3678f151ba24260b5ae85f75b1 231 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 20 231 28.498 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 IX88_16810 ee46cd3678f151ba24260b5ae85f75b1 231 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 50 221 2.3E-39 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like IX88_16810 ee46cd3678f151ba24260b5ae85f75b1 231 SUPERFAMILY SSF89392 39 231 1.92E-46 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX IX88_05595 d54ffd956bf63da561eea7e4f3283c51 468 SUPERFAMILY SSF51905 2 462 4.87E-38 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_05595 d54ffd956bf63da561eea7e4f3283c51 468 TIGRFAM TIGR02485 CobZ_N-term: precorrin 3B synthase CobZ 3 459 2.7E-199 T 11-10-2018 IPR012831 Precorrin 3B synthase CobZ IX88_05595 d54ffd956bf63da561eea7e4f3283c51 468 Pfam PF00890 FAD binding domain 3 432 1.2E-33 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_05595 d54ffd956bf63da561eea7e4f3283c51 468 Gene3D G3DSA:3.90.700.10 236 397 1.4E-90 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_05595 d54ffd956bf63da561eea7e4f3283c51 468 SUPERFAMILY SSF56425 236 396 1.74E-25 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_05595 d54ffd956bf63da561eea7e4f3283c51 468 Gene3D G3DSA:3.50.50.60 3 455 1.4E-90 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_08995 724b0d75b4d97468409056a7f351d22c 307 SUPERFAMILY SSF51161 112 290 1.34E-44 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily IX88_08995 724b0d75b4d97468409056a7f351d22c 307 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 194 229 8.3E-4 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_08995 724b0d75b4d97468409056a7f351d22c 307 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 249 283 1.2E-6 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_08995 724b0d75b4d97468409056a7f351d22c 307 Pfam PF06426 Serine acetyltransferase, N-terminal 83 159 6.3E-5 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 IX88_08995 724b0d75b4d97468409056a7f351d22c 307 PIRSF PIRSF000441 123 305 1.9E-51 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 IX88_08995 724b0d75b4d97468409056a7f351d22c 307 Gene3D G3DSA:1.10.3130.10 33 189 6.7E-51 T 11-10-2018 IX88_08995 724b0d75b4d97468409056a7f351d22c 307 Gene3D G3DSA:2.160.10.10 190 304 4.2E-29 T 11-10-2018 IX88_11035 d20907282e07ecb0cdb78edebc2e97dc 387 Gene3D G3DSA:3.40.630.30 7 143 3.9E-5 T 11-10-2018 IX88_11035 d20907282e07ecb0cdb78edebc2e97dc 387 SUPERFAMILY SSF55729 11 141 2.71E-7 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_09615 7ef2f93141ed5d4da79e0afeee64679a 135 SUPERFAMILY SSF82784 4 134 1.44E-35 T 11-10-2018 IPR036102 OsmC/Ohr superfamily IX88_09615 7ef2f93141ed5d4da79e0afeee64679a 135 Pfam PF02566 OsmC-like protein 36 132 1.9E-21 T 11-10-2018 IPR003718 OsmC/Ohr family IX88_09615 7ef2f93141ed5d4da79e0afeee64679a 135 Gene3D G3DSA:3.30.300.20 1 135 1.8E-36 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta IX88_11045 a192ff21651d18c16281df356abc6b3a 528 Pfam PF03321 GH3 auxin-responsive promoter 26 517 1.2E-80 T 11-10-2018 IPR004993 GH3 family Reactome: R-HSA-6798695 IX88_03030 68ce00e78b84ff080af15e7ccb44e336 279 Gene3D G3DSA:3.40.50.1980 173 276 3.1E-9 T 11-10-2018 IX88_03030 68ce00e78b84ff080af15e7ccb44e336 279 SUPERFAMILY SSF53807 22 265 2.35E-39 T 11-10-2018 IX88_03030 68ce00e78b84ff080af15e7ccb44e336 279 Gene3D G3DSA:3.40.50.1980 22 172 5.5E-23 T 11-10-2018 IX88_03030 68ce00e78b84ff080af15e7ccb44e336 279 Pfam PF01297 Zinc-uptake complex component A periplasmic 23 219 3.0E-24 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 IX88_00585 36305fb653903d7791b5de9a875fd494 141 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 1.8E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_00585 36305fb653903d7791b5de9a875fd494 141 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 26 115 5.0E-15 T 11-10-2018 IPR031982 Type IV minor pilin ComP IX88_00585 36305fb653903d7791b5de9a875fd494 141 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 24 1.2E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_00585 36305fb653903d7791b5de9a875fd494 141 PRINTS PR00813 Bacterial general secretion pathway protein G signature 40 58 6.4E-10 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 IX88_00585 36305fb653903d7791b5de9a875fd494 141 PRINTS PR00813 Bacterial general secretion pathway protein G signature 4 29 6.4E-10 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 IX88_00585 36305fb653903d7791b5de9a875fd494 141 Gene3D G3DSA:3.30.700.10 5 139 8.1E-21 T 11-10-2018 IX88_00585 36305fb653903d7791b5de9a875fd494 141 SUPERFAMILY SSF54523 5 122 3.37E-22 T 11-10-2018 IX88_07940 e5425cc29192d403edb609fecb32dc6a 188 Gene3D G3DSA:3.30.420.10 1 187 1.0E-75 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IX88_07940 e5425cc29192d403edb609fecb32dc6a 188 Pfam PF01351 Ribonuclease HII 4 181 1.6E-40 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain IX88_07940 e5425cc29192d403edb609fecb32dc6a 188 Hamap MF_00052_B Ribonuclease HII [rnhB]. 2 182 37.252 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 IX88_07940 e5425cc29192d403edb609fecb32dc6a 188 SUPERFAMILY SSF53098 2 187 5.61E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_05975 cc6da4b11a2ac4c7633d3eda3f9fd31f 231 Pfam PF07729 FCD domain 82 202 5.0E-11 T 11-10-2018 IPR011711 GntR, C-terminal IX88_05975 cc6da4b11a2ac4c7633d3eda3f9fd31f 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 1.0E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_05975 cc6da4b11a2ac4c7633d3eda3f9fd31f 231 SMART SM00345 13 71 2.6E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_05975 cc6da4b11a2ac4c7633d3eda3f9fd31f 231 SUPERFAMILY SSF46785 3 75 5.61E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_05975 cc6da4b11a2ac4c7633d3eda3f9fd31f 231 SUPERFAMILY SSF48008 81 213 2.62E-6 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_05975 cc6da4b11a2ac4c7633d3eda3f9fd31f 231 Gene3D G3DSA:1.20.120.530 74 215 3.8E-10 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_05975 cc6da4b11a2ac4c7633d3eda3f9fd31f 231 Gene3D G3DSA:1.10.10.10 5 73 1.6E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_16465 77b74d69e2afab20fd376329719e536c 380 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 42 366 1.1E-52 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 IX88_16465 77b74d69e2afab20fd376329719e536c 380 SUPERFAMILY SSF51695 35 371 3.66E-75 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 IX88_16465 77b74d69e2afab20fd376329719e536c 380 Gene3D G3DSA:3.20.20.190 36 372 2.4E-113 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 IX88_06025 3caf13f0eac14efdb8a00b3f87270ed6 385 SUPERFAMILY SSF53383 4 385 3.71E-88 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_06025 3caf13f0eac14efdb8a00b3f87270ed6 385 Gene3D G3DSA:3.90.1150.10 40 382 3.3E-112 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_06025 3caf13f0eac14efdb8a00b3f87270ed6 385 Gene3D G3DSA:3.40.640.10 56 292 3.3E-112 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_06025 3caf13f0eac14efdb8a00b3f87270ed6 385 Pfam PF00155 Aminotransferase class I and II 39 383 3.1E-53 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 IX88_06025 3caf13f0eac14efdb8a00b3f87270ed6 385 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 IX88_02045 db262966b4b793151ac1dcce78a9c9dd 894 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 2 894 18.652 T 11-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 IX88_02045 db262966b4b793151ac1dcce78a9c9dd 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 191 207 5.9E-68 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 IX88_02045 db262966b4b793151ac1dcce78a9c9dd 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 587 616 5.9E-68 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 IX88_02045 db262966b4b793151ac1dcce78a9c9dd 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 250 265 5.9E-68 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 IX88_02045 db262966b4b793151ac1dcce78a9c9dd 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 389 409 5.9E-68 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 IX88_02045 db262966b4b793151ac1dcce78a9c9dd 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 545 565 5.9E-68 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 IX88_02045 db262966b4b793151ac1dcce78a9c9dd 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 138 151 5.9E-68 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 IX88_02045 db262966b4b793151ac1dcce78a9c9dd 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 719 745 5.9E-68 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 IX88_02045 db262966b4b793151ac1dcce78a9c9dd 894 Gene3D G3DSA:1.20.1440.90 305 392 3.9E-22 T 11-10-2018 IX88_02045 db262966b4b793151ac1dcce78a9c9dd 894 Pfam PF00311 Phosphoenolpyruvate carboxylase 134 894 5.5E-280 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 IX88_02045 db262966b4b793151ac1dcce78a9c9dd 894 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 547 559 - T 11-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 IX88_02045 db262966b4b793151ac1dcce78a9c9dd 894 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 139 150 - T 11-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 IX88_02045 db262966b4b793151ac1dcce78a9c9dd 894 SUPERFAMILY SSF51621 6 894 0.0 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 IX88_08965 a31e1076544d46f40f739fdebb7818f5 286 Gene3D G3DSA:3.40.190.10 139 229 9.3E-76 T 11-10-2018 IX88_08965 a31e1076544d46f40f739fdebb7818f5 286 SMART SM00062 49 271 2.2E-70 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IX88_08965 a31e1076544d46f40f739fdebb7818f5 286 SUPERFAMILY SSF53850 9 265 3.31E-60 T 11-10-2018 IX88_08965 a31e1076544d46f40f739fdebb7818f5 286 Gene3D G3DSA:3.40.190.10 44 264 9.3E-76 T 11-10-2018 IX88_08965 a31e1076544d46f40f739fdebb7818f5 286 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 265 1.0E-50 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IX88_08375 205e5d19b232b1c7b5881086ea99380f 223 SUPERFAMILY SSF55166 86 216 1.02E-15 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 IX88_08375 205e5d19b232b1c7b5881086ea99380f 223 Gene3D G3DSA:3.30.1380.10 77 214 1.1E-5 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 IX88_08375 205e5d19b232b1c7b5881086ea99380f 223 Pfam PF08291 Peptidase M15 123 160 1.1E-5 T 11-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 IX88_09120 bad7715f334de4d125cab10e51dca486 472 Gene3D G3DSA:1.10.10.10 2 67 1.4E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_09120 bad7715f334de4d125cab10e51dca486 472 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.0E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_09120 bad7715f334de4d125cab10e51dca486 472 SUPERFAMILY SSF53383 91 466 4.74E-87 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_09120 bad7715f334de4d125cab10e51dca486 472 Gene3D G3DSA:3.90.1150.10 97 461 8.2E-83 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_09120 bad7715f334de4d125cab10e51dca486 472 SMART SM00345 7 66 6.6E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_09120 bad7715f334de4d125cab10e51dca486 472 SUPERFAMILY SSF46785 5 76 2.37E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_09120 bad7715f334de4d125cab10e51dca486 472 Gene3D G3DSA:3.40.640.10 140 359 8.2E-83 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_09120 bad7715f334de4d125cab10e51dca486 472 Pfam PF00155 Aminotransferase class I and II 145 456 2.1E-33 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 IX88_02085 db07e7f0d65b03c31b152d658d241f2c 47 Pfam PF16951 Putative methionine and alanine importer, small subunit 1 35 2.5E-11 T 11-10-2018 IPR031596 Putative methionine and alanine importer, small subunit IX88_16970 f140e89805e92fd4ea801bf93b346f14 122 Gene3D G3DSA:3.90.1150.30 2 122 2.0E-37 T 11-10-2018 IPR038056 YjbR-like superfamily IX88_16970 f140e89805e92fd4ea801bf93b346f14 122 SUPERFAMILY SSF142906 10 119 3.92E-35 T 11-10-2018 IPR038056 YjbR-like superfamily IX88_16970 f140e89805e92fd4ea801bf93b346f14 122 Pfam PF04237 YjbR 17 106 1.5E-21 T 11-10-2018 IPR007351 Uncharacterised protein YjbR IX88_06210 6ca06cba4083e2102846938565c4318b 163 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 60 1.8E-17 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 IX88_06210 6ca06cba4083e2102846938565c4318b 163 Gene3D G3DSA:3.40.50.620 1 163 1.5E-59 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_06210 6ca06cba4083e2102846938565c4318b 163 Pfam PF01467 Cytidylyltransferase-like 7 135 4.6E-21 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 IX88_06210 6ca06cba4083e2102846938565c4318b 163 SUPERFAMILY SSF52374 3 158 3.49E-45 T 11-10-2018 IX88_06210 6ca06cba4083e2102846938565c4318b 163 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 160 35.651 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 IX88_06210 6ca06cba4083e2102846938565c4318b 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 5.4E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 IX88_06210 6ca06cba4083e2102846938565c4318b 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 5.4E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 IX88_06210 6ca06cba4083e2102846938565c4318b 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 5.4E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 IX88_06210 6ca06cba4083e2102846938565c4318b 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 5.4E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 IX88_06210 6ca06cba4083e2102846938565c4318b 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 5.4E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 IX88_06210 6ca06cba4083e2102846938565c4318b 163 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 158 1.5E-58 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 IX88_00855 f44751a7910108b5fb4dcecd5d5a17a3 405 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 91 313 3.6E-32 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IX88_00855 f44751a7910108b5fb4dcecd5d5a17a3 405 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 76 393 5.9E-41 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 IX88_00855 f44751a7910108b5fb4dcecd5d5a17a3 405 Gene3D G3DSA:2.40.50.100 102 241 7.6E-63 T 11-10-2018 IX88_00855 f44751a7910108b5fb4dcecd5d5a17a3 405 Gene3D G3DSA:2.40.420.20 77 383 7.6E-63 T 11-10-2018 IX88_00855 f44751a7910108b5fb4dcecd5d5a17a3 405 Gene3D G3DSA:2.40.30.170 88 321 7.6E-63 T 11-10-2018 IX88_00855 f44751a7910108b5fb4dcecd5d5a17a3 405 Gene3D G3DSA:1.10.287.470 136 206 7.6E-63 T 11-10-2018 IX88_00855 f44751a7910108b5fb4dcecd5d5a17a3 405 SUPERFAMILY SSF111369 100 321 1.83E-22 T 11-10-2018 IX88_12185 72570dfa37ae34c06f3c0d1d29d6b9e8 103 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 103 2.9E-26 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE IX88_12185 72570dfa37ae34c06f3c0d1d29d6b9e8 103 PIRSF PIRSF006223 1 103 3.7E-21 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE IX88_12185 72570dfa37ae34c06f3c0d1d29d6b9e8 103 Pfam PF04358 DsrC like protein 2 103 1.8E-27 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE IX88_12185 72570dfa37ae34c06f3c0d1d29d6b9e8 103 Gene3D G3DSA:1.10.10.370 33 103 3.2E-19 T 11-10-2018 IX88_12185 72570dfa37ae34c06f3c0d1d29d6b9e8 103 Gene3D G3DSA:3.30.1420.10 1 29 2.0E-7 T 11-10-2018 IX88_12185 72570dfa37ae34c06f3c0d1d29d6b9e8 103 SUPERFAMILY SSF69721 2 103 5.62E-29 T 11-10-2018 IPR025526 DsrC-like domain superfamily IX88_00820 f46b12eda7ab22d5838de5ff853b7526 286 Gene3D G3DSA:3.40.50.1820 119 283 2.6E-7 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_00820 f46b12eda7ab22d5838de5ff853b7526 286 SUPERFAMILY SSF53474 146 254 1.68E-9 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_01755 65feef3655325e08c78aa2e33c27d1ca 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 17 152 5.4E-54 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 IX88_01755 65feef3655325e08c78aa2e33c27d1ca 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 11 156 30.988 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 IX88_01755 65feef3655325e08c78aa2e33c27d1ca 156 SUPERFAMILY SSF52121 11 156 2.49E-59 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 IX88_01755 65feef3655325e08c78aa2e33c27d1ca 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 17 153 4.6E-56 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 IX88_01755 65feef3655325e08c78aa2e33c27d1ca 156 Gene3D G3DSA:3.40.50.960 3 156 1.1E-58 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 IX88_10235 5715ec036f41b8bef5d75a7bfc082940 247 Pfam PF02654 Cobalamin-5-phosphate synthase 7 236 4.3E-52 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 IX88_10235 5715ec036f41b8bef5d75a7bfc082940 247 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 247 43.173 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 IX88_10235 5715ec036f41b8bef5d75a7bfc082940 247 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 4 236 2.6E-39 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 IX88_02815 ac3d19f4451f1ff4f9ff092ab06d8d1a 505 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 13 488 1.6E-229 T 11-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 IX88_02815 ac3d19f4451f1ff4f9ff092ab06d8d1a 505 Gene3D G3DSA:3.40.309.10 257 457 8.0E-151 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_02815 ac3d19f4451f1ff4f9ff092ab06d8d1a 505 Pfam PF00171 Aldehyde dehydrogenase family 21 484 1.1E-144 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_02815 ac3d19f4451f1ff4f9ff092ab06d8d1a 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 IX88_02815 ac3d19f4451f1ff4f9ff092ab06d8d1a 505 Gene3D G3DSA:3.40.605.10 32 465 8.0E-151 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_02815 ac3d19f4451f1ff4f9ff092ab06d8d1a 505 SUPERFAMILY SSF53720 9 490 2.62E-152 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_06105 8881b4b6e4d5ac1d6956a5aeabbc8d2a 219 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 16 218 41.825 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 IX88_06105 8881b4b6e4d5ac1d6956a5aeabbc8d2a 219 Gene3D G3DSA:3.90.870.10 7 218 4.5E-87 T 11-10-2018 IX88_06105 8881b4b6e4d5ac1d6956a5aeabbc8d2a 219 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 19 214 1.9E-77 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 IX88_06105 8881b4b6e4d5ac1d6956a5aeabbc8d2a 219 SUPERFAMILY SSF55821 17 217 1.81E-82 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily IX88_06105 8881b4b6e4d5ac1d6956a5aeabbc8d2a 219 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 22 213 8.1E-81 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 SMART SM00873 211 384 1.1E-92 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 4.0E-27 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 SUPERFAMILY SSF50249 38 197 6.12E-52 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 Gene3D G3DSA:3.30.930.10 488 688 9.0E-52 T 11-10-2018 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 SMART SM00896 698 791 3.0E-40 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 Gene3D G3DSA:2.40.50.140 39 154 1.7E-72 T 11-10-2018 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 44.58 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 5.3E-262 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 SUPERFAMILY SSF56037 206 393 7.59E-70 T 11-10-2018 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 Gene3D G3DSA:3.30.70.380 699 792 1.5E-28 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 SUPERFAMILY SSF46955 405 475 3.3E-16 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 Pfam PF03484 tRNA synthetase B5 domain 407 471 1.8E-16 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 Gene3D G3DSA:3.30.56.10 7 180 1.7E-72 T 11-10-2018 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 Gene3D G3DSA:3.30.56.10 400 474 2.0E-21 T 11-10-2018 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 SMART SM00874 402 471 7.5E-23 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 SUPERFAMILY SSF55681 467 686 9.94E-46 T 11-10-2018 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 Pfam PF01588 Putative tRNA binding domain 45 145 5.8E-28 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 Gene3D G3DSA:3.50.40.10 197 393 2.7E-74 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 Pfam PF03483 B3/4 domain 212 384 2.4E-67 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 IX88_05215 04ebcec1b73bd163130aa9b5161f03a8 793 SUPERFAMILY SSF54991 694 791 1.57E-29 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 IX88_03135 6156c0d756406d99e794cb2994d738c4 704 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 61 704 2.6E-233 T 11-10-2018 IPR010100 TonB-dependent copper receptor IX88_03135 6156c0d756406d99e794cb2994d738c4 704 Gene3D G3DSA:2.170.130.10 63 164 3.8E-11 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_03135 6156c0d756406d99e794cb2994d738c4 704 SUPERFAMILY SSF56935 44 704 7.94E-80 T 11-10-2018 IX88_03135 6156c0d756406d99e794cb2994d738c4 704 Pfam PF00593 TonB dependent receptor 211 703 3.4E-39 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_03135 6156c0d756406d99e794cb2994d738c4 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 156 3.2E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_03135 6156c0d756406d99e794cb2994d738c4 704 Gene3D G3DSA:2.40.170.20 168 704 5.6E-56 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IX88_15595 81f0427e6f589419aa95eefdb9ccec64 262 Pfam PF00849 RNA pseudouridylate synthase 3 147 7.7E-11 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_15595 81f0427e6f589419aa95eefdb9ccec64 262 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 7 180 5.0E-47 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 IX88_15595 81f0427e6f589419aa95eefdb9ccec64 262 SUPERFAMILY SSF55120 3 189 7.2E-36 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_15595 81f0427e6f589419aa95eefdb9ccec64 262 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 38 52 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 IX88_15595 81f0427e6f589419aa95eefdb9ccec64 262 Gene3D G3DSA:3.30.70.580 1 66 3.1E-18 T 11-10-2018 IX88_15595 81f0427e6f589419aa95eefdb9ccec64 262 Gene3D G3DSA:3.30.70.1560 67 167 3.2E-39 T 11-10-2018 IX88_14610 740c955f56a660f3201c8628f6df80b9 250 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 227 41.097 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_14610 740c955f56a660f3201c8628f6df80b9 250 Gene3D G3DSA:1.10.287.610 105 152 1.6E-92 T 11-10-2018 IX88_14610 740c955f56a660f3201c8628f6df80b9 250 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 IX88_14610 740c955f56a660f3201c8628f6df80b9 250 PRINTS PR00395 Ribosomal protein S2 signature 160 177 6.8E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_14610 740c955f56a660f3201c8628f6df80b9 250 PRINTS PR00395 Ribosomal protein S2 signature 39 48 6.8E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_14610 740c955f56a660f3201c8628f6df80b9 250 PRINTS PR00395 Ribosomal protein S2 signature 89 106 6.8E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_14610 740c955f56a660f3201c8628f6df80b9 250 PRINTS PR00395 Ribosomal protein S2 signature 8 26 6.8E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_14610 740c955f56a660f3201c8628f6df80b9 250 PRINTS PR00395 Ribosomal protein S2 signature 198 212 6.8E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_14610 740c955f56a660f3201c8628f6df80b9 250 PRINTS PR00395 Ribosomal protein S2 signature 177 188 6.8E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_14610 740c955f56a660f3201c8628f6df80b9 250 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 6 228 1.8E-103 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_14610 740c955f56a660f3201c8628f6df80b9 250 Pfam PF00318 Ribosomal protein S2 11 226 2.5E-94 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_14610 740c955f56a660f3201c8628f6df80b9 250 SUPERFAMILY SSF52313 8 234 6.41E-94 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily IX88_14610 740c955f56a660f3201c8628f6df80b9 250 Gene3D G3DSA:3.40.50.10490 11 221 1.6E-92 T 11-10-2018 IX88_14610 740c955f56a660f3201c8628f6df80b9 250 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 160 184 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 IX88_00300 58504019860cd48e17b56da92f2cc7ef 634 SUPERFAMILY SSF52518 315 499 1.14E-59 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_00300 58504019860cd48e17b56da92f2cc7ef 634 SUPERFAMILY SSF52922 488 625 9.03E-32 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 IX88_00300 58504019860cd48e17b56da92f2cc7ef 634 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 15 628 42.238 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 IX88_00300 58504019860cd48e17b56da92f2cc7ef 634 Gene3D G3DSA:3.40.50.920 499 632 3.2E-38 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 IX88_00300 58504019860cd48e17b56da92f2cc7ef 634 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 16 284 4.6E-105 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 IX88_00300 58504019860cd48e17b56da92f2cc7ef 634 SUPERFAMILY SSF52518 12 378 3.4E-75 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_00300 58504019860cd48e17b56da92f2cc7ef 634 SMART SM00861 316 480 2.2E-68 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain IX88_00300 58504019860cd48e17b56da92f2cc7ef 634 Pfam PF02780 Transketolase, C-terminal domain 500 619 4.9E-28 T 11-10-2018 IPR033248 Transketolase, C-terminal domain IX88_00300 58504019860cd48e17b56da92f2cc7ef 634 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 18 625 1.5E-240 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 IX88_00300 58504019860cd48e17b56da92f2cc7ef 634 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 IX88_00300 58504019860cd48e17b56da92f2cc7ef 634 Gene3D G3DSA:3.40.50.970 315 488 3.8E-68 T 11-10-2018 IX88_00300 58504019860cd48e17b56da92f2cc7ef 634 Pfam PF02779 Transketolase, pyrimidine binding domain 316 475 4.6E-40 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain IX88_13495 9fb1027656ff6d5def1aca2f24a81d78 288 PIRSF PIRSF002854 1 279 3.8E-74 T 11-10-2018 IPR004872 Lipoprotein NlpA family IX88_13495 9fb1027656ff6d5def1aca2f24a81d78 288 Gene3D G3DSA:3.40.190.10 40 269 5.8E-79 T 11-10-2018 IX88_13495 9fb1027656ff6d5def1aca2f24a81d78 288 SUPERFAMILY SSF53850 37 277 6.92E-67 T 11-10-2018 IX88_13495 9fb1027656ff6d5def1aca2f24a81d78 288 Gene3D G3DSA:3.40.190.10 117 228 5.8E-79 T 11-10-2018 IX88_13495 9fb1027656ff6d5def1aca2f24a81d78 288 Pfam PF03180 NLPA lipoprotein 41 276 2.1E-68 T 11-10-2018 IPR004872 Lipoprotein NlpA family IX88_17630 9db85b5e2597fd034336a7d9d6bf2006 487 Gene3D G3DSA:3.30.870.10 300 458 2.9E-27 T 11-10-2018 IX88_17630 9db85b5e2597fd034336a7d9d6bf2006 487 SUPERFAMILY SSF56024 303 449 1.54E-19 T 11-10-2018 IX88_17630 9db85b5e2597fd034336a7d9d6bf2006 487 SUPERFAMILY SSF56024 76 268 9.87E-19 T 11-10-2018 IX88_17630 9db85b5e2597fd034336a7d9d6bf2006 487 Pfam PF13091 PLD-like domain 311 450 1.7E-21 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 IX88_09295 2c3b651a8a46778b29827e92133ae6eb 139 SUPERFAMILY SSF51316 4 138 2.25E-59 T 11-10-2018 IPR011057 Mss4-like superfamily IX88_09295 2c3b651a8a46778b29827e92133ae6eb 139 Pfam PF01641 SelR domain 10 128 3.9E-55 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 IX88_09295 2c3b651a8a46778b29827e92133ae6eb 139 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 138 1.8E-56 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 IX88_09295 2c3b651a8a46778b29827e92133ae6eb 139 Gene3D G3DSA:2.170.150.20 2 139 1.4E-62 T 11-10-2018 IX88_09295 2c3b651a8a46778b29827e92133ae6eb 139 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 130 36.983 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 IX88_14905 8caf53c120d9344789667a3fb7246834 508 Pfam PF17289 Terminase RNaseH-like domain 343 497 2.3E-12 T 11-10-2018 IPR035421 Terminase, large subunit gp17-like IX88_14905 8caf53c120d9344789667a3fb7246834 508 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 356 500 1.2E-28 T 11-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit IX88_14905 8caf53c120d9344789667a3fb7246834 508 Gene3D G3DSA:3.40.50.300 50 151 3.5E-6 T 11-10-2018 IX88_14905 8caf53c120d9344789667a3fb7246834 508 SUPERFAMILY SSF52540 53 131 2.13E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_09845 2c0e4c27f121f00eb3c14b91601315b4 319 PIRSF PIRSF002786 4 317 1.6E-91 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 IX88_09845 2c0e4c27f121f00eb3c14b91601315b4 319 Pfam PF03934 Type II secretion system (T2SS), protein K 34 310 7.6E-75 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 IX88_09845 2c0e4c27f121f00eb3c14b91601315b4 319 Gene3D G3DSA:1.10.40.60 211 278 1.5E-69 T 11-10-2018 IPR038072 GspK, central domain superfamily IX88_09845 2c0e4c27f121f00eb3c14b91601315b4 319 Gene3D G3DSA:3.30.1300.30 46 303 1.5E-69 T 11-10-2018 IX88_09845 2c0e4c27f121f00eb3c14b91601315b4 319 Gene3D G3DSA:1.10.40.60 103 210 1.5E-69 T 11-10-2018 IPR038072 GspK, central domain superfamily IX88_09845 2c0e4c27f121f00eb3c14b91601315b4 319 SUPERFAMILY SSF158544 105 209 1.54E-28 T 11-10-2018 IPR038072 GspK, central domain superfamily IX88_09845 2c0e4c27f121f00eb3c14b91601315b4 319 SUPERFAMILY SSF54523 41 313 1.15E-20 T 11-10-2018 IX88_01930 17f7fb1c6321cc265fa000e6616361c4 390 Gene3D G3DSA:2.120.10.30 41 388 2.4E-107 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like IX88_01930 17f7fb1c6321cc265fa000e6616361c4 390 Pfam PF07995 Glucose / Sorbosone dehydrogenase 56 383 1.6E-125 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase IX88_01930 17f7fb1c6321cc265fa000e6616361c4 390 SUPERFAMILY SSF50952 53 377 2.09E-47 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 IX88_07805 131eb0e9475850bded05aa9cf1d8e4f7 277 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 264 2.3E-55 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 IX88_07805 131eb0e9475850bded05aa9cf1d8e4f7 277 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 109 129 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 IX88_07805 131eb0e9475850bded05aa9cf1d8e4f7 277 SUPERFAMILY SSF52096 6 263 9.96E-67 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_07805 131eb0e9475850bded05aa9cf1d8e4f7 277 Gene3D G3DSA:3.90.226.10 1 210 3.2E-75 T 11-10-2018 IX88_16820 6f74c26a654a4777310b7232166a9919 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_16820 6f74c26a654a4777310b7232166a9919 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 9.2E-42 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_16820 6f74c26a654a4777310b7232166a9919 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.7E-40 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_16820 6f74c26a654a4777310b7232166a9919 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.256 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_16820 6f74c26a654a4777310b7232166a9919 103 SUPERFAMILY SSF141091 1 101 1.83E-39 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_11965 4db308f12d49a6eeb5ed100bdb1c0c94 484 Pfam PF01740 STAS domain 401 483 7.7E-9 T 11-10-2018 IPR002645 STAS domain IX88_11965 4db308f12d49a6eeb5ed100bdb1c0c94 484 SUPERFAMILY SSF52091 392 481 1.31E-11 T 11-10-2018 IPR036513 STAS domain superfamily IX88_11965 4db308f12d49a6eeb5ed100bdb1c0c94 484 ProSitePatterns PS01130 SLC26A transporters signature. 42 63 - T 11-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 IX88_11965 4db308f12d49a6eeb5ed100bdb1c0c94 484 Gene3D G3DSA:3.30.750.24 388 482 5.7E-27 T 11-10-2018 IPR036513 STAS domain superfamily IX88_11965 4db308f12d49a6eeb5ed100bdb1c0c94 484 Pfam PF00916 Sulfate permease family 14 142 1.1E-27 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 IX88_06780 5c7c8f18f7b12b2f8ae477e7229d9aae 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06780 5c7c8f18f7b12b2f8ae477e7229d9aae 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06780 5c7c8f18f7b12b2f8ae477e7229d9aae 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06780 5c7c8f18f7b12b2f8ae477e7229d9aae 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06780 5c7c8f18f7b12b2f8ae477e7229d9aae 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06780 5c7c8f18f7b12b2f8ae477e7229d9aae 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06780 5c7c8f18f7b12b2f8ae477e7229d9aae 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06780 5c7c8f18f7b12b2f8ae477e7229d9aae 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06780 5c7c8f18f7b12b2f8ae477e7229d9aae 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 1.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06780 5c7c8f18f7b12b2f8ae477e7229d9aae 264 Gene3D G3DSA:3.40.50.720 1 263 2.3E-67 T 11-10-2018 IX88_06780 5c7c8f18f7b12b2f8ae477e7229d9aae 264 Pfam PF00106 short chain dehydrogenase 8 201 3.9E-47 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06780 5c7c8f18f7b12b2f8ae477e7229d9aae 264 SUPERFAMILY SSF51735 6 261 2.13E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_02645 e80b36c39742bcb942193f29f69b1c40 339 Gene3D G3DSA:3.90.25.10 195 330 4.2E-137 T 11-10-2018 IX88_02645 e80b36c39742bcb942193f29f69b1c40 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 336 4.2E-137 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 IX88_02645 e80b36c39742bcb942193f29f69b1c40 339 SUPERFAMILY SSF51735 1 337 5.79E-94 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_02645 e80b36c39742bcb942193f29f69b1c40 339 Gene3D G3DSA:3.40.50.720 4 275 4.2E-137 T 11-10-2018 IX88_02645 e80b36c39742bcb942193f29f69b1c40 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 325 1.3E-55 T 11-10-2018 IPR016040 NAD(P)-binding domain IX88_06655 bad0661d18a2b20d445091f6f37e653f 540 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 508 2.4E-146 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 IX88_06655 bad0661d18a2b20d445091f6f37e653f 540 ProSitePatterns PS01303 BCCT family of transporters signature. 322 331 - T 11-10-2018 IPR018093 BCCT transporter, conserved site IX88_06655 bad0661d18a2b20d445091f6f37e653f 540 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 19 508 7.1E-167 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 IX88_12520 16510d65c76c6f9ac713d6c164becb77 185 Pfam PF10045 Uncharacterized conserved protein (DUF2280) 1 96 7.9E-32 T 11-10-2018 IPR018738 Protein of unknown function DUF2280 IX88_00920 19c49ef48fe806b196aac37e0a3dd69c 504 SUPERFAMILY SSF100950 225 494 6.95E-85 T 11-10-2018 IPR037171 NagB/RpiA transferase-like IX88_00920 19c49ef48fe806b196aac37e0a3dd69c 504 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 12 494 1.1E-236 T 11-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 IX88_00920 19c49ef48fe806b196aac37e0a3dd69c 504 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 11 215 5.0E-32 T 11-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 IX88_00920 19c49ef48fe806b196aac37e0a3dd69c 504 Gene3D G3DSA:3.40.1080.20 336 477 5.7E-39 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily IX88_00920 19c49ef48fe806b196aac37e0a3dd69c 504 Gene3D G3DSA:3.30.750.70 248 329 6.4E-6 T 11-10-2018 IX88_00920 19c49ef48fe806b196aac37e0a3dd69c 504 Gene3D G3DSA:3.40.1080.10 13 187 1.2E-16 T 11-10-2018 IX88_00920 19c49ef48fe806b196aac37e0a3dd69c 504 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 322 463 7.0E-41 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain IX88_00920 19c49ef48fe806b196aac37e0a3dd69c 504 SUPERFAMILY SSF100950 4 222 7.44E-75 T 11-10-2018 IPR037171 NagB/RpiA transferase-like IX88_05575 58ee157ae00ea3e3e4c4772cc952b697 409 SUPERFAMILY SSF89796 1 404 2.62E-137 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily IX88_05575 58ee157ae00ea3e3e4c4772cc952b697 409 Gene3D G3DSA:3.30.1540.10 242 333 1.4E-135 T 11-10-2018 IX88_05575 58ee157ae00ea3e3e4c4772cc952b697 409 Pfam PF02515 CoA-transferase family III 4 382 6.1E-130 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 IX88_05575 58ee157ae00ea3e3e4c4772cc952b697 409 Gene3D G3DSA:3.40.50.10540 4 397 1.4E-135 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily IX88_10545 c20bb8fb7c4693d2aa7775038d5ed9ca 577 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 1.1E-5 T 11-10-2018 IX88_10545 c20bb8fb7c4693d2aa7775038d5ed9ca 577 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 1.1E-5 T 11-10-2018 IX88_10545 c20bb8fb7c4693d2aa7775038d5ed9ca 577 Pfam PF00890 FAD binding domain 9 378 1.2E-32 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_10545 c20bb8fb7c4693d2aa7775038d5ed9ca 577 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 4.2E-10 T 11-10-2018 IX88_10545 c20bb8fb7c4693d2aa7775038d5ed9ca 577 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 4.2E-10 T 11-10-2018 IX88_10545 c20bb8fb7c4693d2aa7775038d5ed9ca 577 Gene3D G3DSA:3.50.50.90 328 556 8.6E-53 T 11-10-2018 IX88_10545 c20bb8fb7c4693d2aa7775038d5ed9ca 577 Gene3D G3DSA:3.50.50.90 1 282 1.1E-75 T 11-10-2018 IX88_10545 c20bb8fb7c4693d2aa7775038d5ed9ca 577 PIRSF PIRSF000171 1 561 3.3E-232 T 11-10-2018 IX88_10545 c20bb8fb7c4693d2aa7775038d5ed9ca 577 Pfam PF02910 Fumarate reductase flavoprotein C-term 440 545 7.2E-13 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_10545 c20bb8fb7c4693d2aa7775038d5ed9ca 577 SUPERFAMILY SSF51905 3 406 8.85E-60 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_10545 c20bb8fb7c4693d2aa7775038d5ed9ca 577 SUPERFAMILY SSF46977 425 552 9.94E-37 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_07710 189e88b0e743f052d5cdaf2541aee7f5 411 PIRSF PIRSF000521 160 401 1.5E-35 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_07710 189e88b0e743f052d5cdaf2541aee7f5 411 PIRSF PIRSF000521 27 159 8.7E-4 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_07710 189e88b0e743f052d5cdaf2541aee7f5 411 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 14 398 1.6E-152 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 IX88_07710 189e88b0e743f052d5cdaf2541aee7f5 411 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 69.338 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 IX88_07710 189e88b0e743f052d5cdaf2541aee7f5 411 Pfam PF00202 Aminotransferase class-III 24 398 1.2E-120 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_07710 189e88b0e743f052d5cdaf2541aee7f5 411 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 6 402 1.3E-219 T 11-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 IX88_07710 189e88b0e743f052d5cdaf2541aee7f5 411 SUPERFAMILY SSF53383 14 399 3.9E-125 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_07710 189e88b0e743f052d5cdaf2541aee7f5 411 Gene3D G3DSA:3.90.1150.10 24 391 2.0E-149 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_07710 189e88b0e743f052d5cdaf2541aee7f5 411 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 221 258 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 IX88_07710 189e88b0e743f052d5cdaf2541aee7f5 411 Gene3D G3DSA:3.40.640.10 58 303 2.0E-149 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_07715 848294224317567e02c79630403640ed 364 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 1.2E-134 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 IX88_07715 848294224317567e02c79630403640ed 364 SUPERFAMILY SSF55729 1 338 2.72E-123 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_07715 848294224317567e02c79630403640ed 364 Gene3D G3DSA:3.40.630.30 1 272 4.7E-111 T 11-10-2018 IX88_07715 848294224317567e02c79630403640ed 364 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 3.4E-146 T 11-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 IX88_07715 848294224317567e02c79630403640ed 364 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 2.0E-130 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 IX88_01170 e23421225992d8a20ad728c53d5fbc3e 208 SUPERFAMILY SSF52499 5 201 3.01E-53 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 IX88_01170 e23421225992d8a20ad728c53d5fbc3e 208 Pfam PF00857 Isochorismatase family 14 165 2.8E-23 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 IX88_01170 e23421225992d8a20ad728c53d5fbc3e 208 Gene3D G3DSA:3.40.50.850 1 208 4.3E-60 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 IX88_13200 0416d432a4f1f386afa642590e4d028b 906 Gene3D G3DSA:2.40.160.50 575 906 1.5E-96 T 11-10-2018 IX88_13200 0416d432a4f1f386afa642590e4d028b 906 Gene3D G3DSA:3.10.20.310 313 400 7.6E-19 T 11-10-2018 IX88_13200 0416d432a4f1f386afa642590e4d028b 906 Pfam PF07244 Surface antigen variable number repeat 321 395 3.2E-5 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 IX88_13200 0416d432a4f1f386afa642590e4d028b 906 Gene3D G3DSA:3.10.20.310 401 489 8.2E-6 T 11-10-2018 IX88_13200 0416d432a4f1f386afa642590e4d028b 906 Pfam PF01103 Surface antigen 665 903 5.0E-35 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 IX88_13200 0416d432a4f1f386afa642590e4d028b 906 Pfam PF17243 POTRA domain TamA domain 1 243 311 5.6E-11 T 11-10-2018 IPR035243 TamA, POTRA domain 1 IX88_04910 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 568 1.7E-253 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 IX88_04910 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 Gene3D G3DSA:3.40.50.970 1 182 6.8E-73 T 11-10-2018 IX88_04910 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 SUPERFAMILY SSF52518 373 567 4.07E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_04910 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 6.1E-44 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 IX88_04910 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 Gene3D G3DSA:3.40.50.970 365 573 1.1E-63 T 11-10-2018 IX88_04910 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 SUPERFAMILY SSF52518 4 179 7.15E-64 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_04910 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 Gene3D G3DSA:3.40.50.1220 191 362 9.6E-61 T 11-10-2018 IX88_04910 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 1.1E-46 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 IX88_04910 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 SUPERFAMILY SSF52467 190 362 2.55E-64 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily IX88_04910 9e35a58d91c8ca3e9a4e94d5c64e63ab 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 166 3.8E-59 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 IX88_18045 4da4a2b9630796d32ca4c7747a02528a 277 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 52 216 6.1E-39 T 11-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 IX88_18045 4da4a2b9630796d32ca4c7747a02528a 277 Gene3D G3DSA:1.20.120.1760 35 190 1.4E-12 T 11-10-2018 IX88_18045 4da4a2b9630796d32ca4c7747a02528a 277 Pfam PF01066 CDP-alcohol phosphatidyltransferase 45 108 4.6E-13 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 IX88_18045 4da4a2b9630796d32ca4c7747a02528a 277 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 86 108 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 IX88_07145 cd548d44368a2c27a464e9dc139a81dc 230 Pfam PF00633 Helix-hairpin-helix motif 105 132 3.2E-8 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 IX88_07145 cd548d44368a2c27a464e9dc139a81dc 230 SUPERFAMILY SSF48150 6 211 4.24E-71 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 IX88_07145 cd548d44368a2c27a464e9dc139a81dc 230 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 39 173 2.0E-17 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 IX88_07145 cd548d44368a2c27a464e9dc139a81dc 230 Gene3D G3DSA:1.10.340.30 26 137 1.0E-76 T 11-10-2018 IX88_07145 cd548d44368a2c27a464e9dc139a81dc 230 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 IX88_07145 cd548d44368a2c27a464e9dc139a81dc 230 Gene3D G3DSA:1.10.1670.10 16 208 1.0E-76 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 IX88_07145 cd548d44368a2c27a464e9dc139a81dc 230 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 192 208 2.9E-6 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 IX88_07145 cd548d44368a2c27a464e9dc139a81dc 230 ProSitePatterns PS01155 Endonuclease III family signature. 107 136 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 IX88_07145 cd548d44368a2c27a464e9dc139a81dc 230 TIGRFAM TIGR01083 nth: endonuclease III 9 199 8.7E-84 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 IX88_07145 cd548d44368a2c27a464e9dc139a81dc 230 SMART SM00478 43 190 2.4E-52 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 IX88_07145 cd548d44368a2c27a464e9dc139a81dc 230 Hamap MF_00942 Endonuclease III [nth]. 3 214 36.948 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 IX88_07145 cd548d44368a2c27a464e9dc139a81dc 230 PIRSF PIRSF001435 3 214 3.5E-53 T 11-10-2018 IX88_01150 fbdad7768e93bbd5f55dc14d451395e5 140 SUPERFAMILY SSF51316 1 136 1.99E-44 T 11-10-2018 IPR011057 Mss4-like superfamily IX88_01150 fbdad7768e93bbd5f55dc14d451395e5 140 Gene3D G3DSA:2.170.150.70 5 120 1.2E-14 T 11-10-2018 IX88_01150 fbdad7768e93bbd5f55dc14d451395e5 140 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 116 3.9E-26 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 IX88_09210 5af0e6ebbef552741acb84f9a5981fd7 624 Pfam PF07969 Amidohydrolase family 51 534 3.4E-119 T 11-10-2018 IPR013108 Amidohydrolase 3 IX88_09210 5af0e6ebbef552741acb84f9a5981fd7 624 Gene3D G3DSA:3.20.20.140 63 493 7.8E-93 T 11-10-2018 IX88_09210 5af0e6ebbef552741acb84f9a5981fd7 624 SUPERFAMILY SSF51556 62 494 2.22E-44 T 11-10-2018 IPR032466 Metal-dependent hydrolase IX88_09210 5af0e6ebbef552741acb84f9a5981fd7 624 Gene3D G3DSA:3.10.310.70 82 192 7.8E-93 T 11-10-2018 IX88_09210 5af0e6ebbef552741acb84f9a5981fd7 624 SUPERFAMILY SSF51338 5 536 2.33E-19 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 IX88_09210 5af0e6ebbef552741acb84f9a5981fd7 624 Gene3D G3DSA:2.30.40.10 10 509 7.8E-93 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 IX88_06120 5c805f4ffd3dc62057d0e013a396cb30 126 Pfam PF02261 Aspartate decarboxylase 1 114 8.7E-46 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 IX88_06120 5c805f4ffd3dc62057d0e013a396cb30 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 3.3E-46 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 IX88_06120 5c805f4ffd3dc62057d0e013a396cb30 126 Gene3D G3DSA:2.40.40.20 1 126 1.7E-51 T 11-10-2018 IX88_06120 5c805f4ffd3dc62057d0e013a396cb30 126 SUPERFAMILY SSF50692 1 122 6.21E-46 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily IX88_06120 5c805f4ffd3dc62057d0e013a396cb30 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 3.0E-64 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 IX88_06120 5c805f4ffd3dc62057d0e013a396cb30 126 PIRSF PIRSF006246 1 124 1.1E-46 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 IX88_06120 5c805f4ffd3dc62057d0e013a396cb30 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 65.068 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 IX88_05360 220f67591973bb220904eb68c37c3581 83 PIRSF PIRSF003113 1 82 7.8E-21 T 11-10-2018 IPR002634 BolA protein IX88_05360 220f67591973bb220904eb68c37c3581 83 Gene3D G3DSA:3.30.300.90 1 82 4.0E-25 T 11-10-2018 IX88_05360 220f67591973bb220904eb68c37c3581 83 Pfam PF01722 BolA-like protein 22 74 1.8E-12 T 11-10-2018 IPR002634 BolA protein IX88_05360 220f67591973bb220904eb68c37c3581 83 SUPERFAMILY SSF82657 2 78 4.58E-23 T 11-10-2018 IPR036065 BolA-like superfamily IX88_00955 a6afa886256ac1501aaeac80ecca2822 182 Pfam PF05656 Protein of unknown function (DUF805) 16 128 5.4E-21 T 11-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 IX88_01720 70e79fbb6dabc812ad13c1e3e0ad7f11 404 SUPERFAMILY SSF54675 1 140 4.32E-42 T 11-10-2018 IX88_01720 70e79fbb6dabc812ad13c1e3e0ad7f11 404 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 4 398 2.2E-170 T 11-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 IX88_01720 70e79fbb6dabc812ad13c1e3e0ad7f11 404 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 399 47.56 T 11-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 IX88_01720 70e79fbb6dabc812ad13c1e3e0ad7f11 404 PIRSF PIRSF000484 1 386 4.8E-78 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 IX88_01720 70e79fbb6dabc812ad13c1e3e0ad7f11 404 Gene3D G3DSA:3.20.140.10 1 403 2.0E-150 T 11-10-2018 IX88_01720 70e79fbb6dabc812ad13c1e3e0ad7f11 404 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 172 398 2.9E-82 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 IX88_01720 70e79fbb6dabc812ad13c1e3e0ad7f11 404 SUPERFAMILY SSF51690 121 397 3.53E-91 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 IX88_04820 de20833289bc7bf29977503b0826b3c3 232 SUPERFAMILY SSF48452 93 192 3.8E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_04820 de20833289bc7bf29977503b0826b3c3 232 Gene3D G3DSA:1.25.40.10 46 198 4.4E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_04820 de20833289bc7bf29977503b0826b3c3 232 Pfam PF09976 Tetratricopeptide repeat-like domain 13 212 5.4E-44 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 IX88_04820 de20833289bc7bf29977503b0826b3c3 232 PIRSF PIRSF006170 1 217 5.9E-64 T 11-10-2018 IPR026039 Uncharacterised protein family UPF0070 IX88_02575 235b819bf167749639a1d2fa340b4268 729 Pfam PF13614 AAA domain 546 693 1.3E-15 T 11-10-2018 IPR025669 AAA domain IX88_02575 235b819bf167749639a1d2fa340b4268 729 Gene3D G3DSA:3.40.50.300 453 727 5.1E-77 T 11-10-2018 IX88_02575 235b819bf167749639a1d2fa340b4268 729 Pfam PF13807 G-rich domain on putative tyrosine kinase 380 460 1.2E-30 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain IX88_02575 235b819bf167749639a1d2fa340b4268 729 Pfam PF02706 Chain length determinant protein 9 102 3.4E-20 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 IX88_02575 235b819bf167749639a1d2fa340b4268 729 SUPERFAMILY SSF52540 534 714 6.54E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_02575 235b819bf167749639a1d2fa340b4268 729 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 516 719 1.5E-51 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 IX88_04250 7b6848d681b258cd91c6d0dbf994f2e8 415 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 258 390 9.7E-25 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain IX88_04250 7b6848d681b258cd91c6d0dbf994f2e8 415 Gene3D G3DSA:1.20.140.10 239 413 2.5E-55 T 11-10-2018 IX88_04250 7b6848d681b258cd91c6d0dbf994f2e8 415 Gene3D G3DSA:1.10.540.10 32 137 3.2E-22 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_04250 7b6848d681b258cd91c6d0dbf994f2e8 415 SUPERFAMILY SSF56645 37 239 1.02E-42 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_04250 7b6848d681b258cd91c6d0dbf994f2e8 415 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 148 231 3.6E-8 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_04250 7b6848d681b258cd91c6d0dbf994f2e8 415 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 25 414 7.8E-196 T 11-10-2018 IPR023922 Sulphate-starvation-induced SfnB IX88_04250 7b6848d681b258cd91c6d0dbf994f2e8 415 SUPERFAMILY SSF47203 246 414 7.57E-26 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_04250 7b6848d681b258cd91c6d0dbf994f2e8 415 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 137 1.9E-9 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_04250 7b6848d681b258cd91c6d0dbf994f2e8 415 Gene3D G3DSA:2.40.110.10 140 238 2.2E-28 T 11-10-2018 IX88_04250 7b6848d681b258cd91c6d0dbf994f2e8 415 PIRSF PIRSF016578 149 409 1.2E-25 T 11-10-2018 IX88_04250 7b6848d681b258cd91c6d0dbf994f2e8 415 PIRSF PIRSF016578 18 114 4.5E-13 T 11-10-2018 IX88_01345 3af3868a8232268abcc406fc5d9ed2c4 430 Gene3D G3DSA:3.40.50.11720 32 213 1.5E-41 T 11-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 IX88_01345 3af3868a8232268abcc406fc5d9ed2c4 430 SUPERFAMILY SSF53756 177 411 1.57E-10 T 11-10-2018 IX88_01345 3af3868a8232268abcc406fc5d9ed2c4 430 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 37 215 7.2E-54 T 11-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 IX88_01345 3af3868a8232268abcc406fc5d9ed2c4 430 Gene3D G3DSA:3.40.50.2000 219 410 2.4E-63 T 11-10-2018 IX88_16110 9f0e318407b2666a0b7d91c89fc39e03 359 SUPERFAMILY SSF53383 2 357 8.03E-118 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_16110 9f0e318407b2666a0b7d91c89fc39e03 359 Gene3D G3DSA:3.90.1150.10 250 359 1.2E-44 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_16110 9f0e318407b2666a0b7d91c89fc39e03 359 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 205 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IX88_16110 9f0e318407b2666a0b7d91c89fc39e03 359 PIRSF PIRSF000525 1 359 5.1E-150 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 IX88_16110 9f0e318407b2666a0b7d91c89fc39e03 359 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 357 2.9E-159 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 IX88_16110 9f0e318407b2666a0b7d91c89fc39e03 359 Pfam PF00266 Aminotransferase class-V 4 347 7.4E-58 T 11-10-2018 IPR000192 Aminotransferase class V domain IX88_16110 9f0e318407b2666a0b7d91c89fc39e03 359 Gene3D G3DSA:3.40.640.10 16 249 7.4E-95 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_16110 9f0e318407b2666a0b7d91c89fc39e03 359 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 358 50.678 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 IX88_05435 265a362972fe394700b1dbaa947e69c4 182 SUPERFAMILY SSF55811 3 163 4.33E-36 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 IX88_05435 265a362972fe394700b1dbaa947e69c4 182 Gene3D G3DSA:2.20.70.10 1 35 2.5E-12 T 11-10-2018 IX88_05435 265a362972fe394700b1dbaa947e69c4 182 Pfam PF00293 NUDIX domain 43 143 4.2E-10 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 IX88_05435 265a362972fe394700b1dbaa947e69c4 182 Gene3D G3DSA:3.90.79.10 36 180 1.6E-37 T 11-10-2018 IX88_05435 265a362972fe394700b1dbaa947e69c4 182 Pfam PF14803 Nudix N-terminal 3 35 6.5E-14 T 11-10-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 IX88_03480 0186558f9c8b54502dbc5c291c87ed06 208 SUPERFAMILY SSF55811 17 199 1.76E-41 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 IX88_03480 0186558f9c8b54502dbc5c291c87ed06 208 Pfam PF00293 NUDIX domain 55 188 3.6E-12 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 IX88_03480 0186558f9c8b54502dbc5c291c87ed06 208 Gene3D G3DSA:3.90.79.10 4 205 1.1E-53 T 11-10-2018 IX88_03480 0186558f9c8b54502dbc5c291c87ed06 208 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 IX88_03480 0186558f9c8b54502dbc5c291c87ed06 208 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 13 196 8.5E-42 T 11-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 IX88_05815 767004d4ab4ef619ead05d3396d30f6b 115 Pfam PF05901 Excalibur calcium-binding domain 76 109 1.6E-9 T 11-10-2018 IPR008613 Excalibur calcium-binding domain IX88_17780 60516cef1f3aa4969ee9412653eae0d2 283 Gene3D G3DSA:3.20.20.140 4 256 1.8E-68 T 11-10-2018 IX88_17780 60516cef1f3aa4969ee9412653eae0d2 283 SMART SM00481 4 69 2.4E-15 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal IX88_17780 60516cef1f3aa4969ee9412653eae0d2 283 SUPERFAMILY SSF89550 4 270 1.94E-42 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 IX88_17780 60516cef1f3aa4969ee9412653eae0d2 283 Pfam PF02811 PHP domain 5 120 2.3E-11 T 11-10-2018 IPR004013 PHP domain GO:0003824 IX88_17780 60516cef1f3aa4969ee9412653eae0d2 283 Gene3D G3DSA:1.10.150.650 102 175 1.8E-68 T 11-10-2018 IX88_12835 d66b2389a3f338df0c939669ab78ad6c 157 Gene3D G3DSA:1.10.10.10 1 61 1.0E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_12835 d66b2389a3f338df0c939669ab78ad6c 157 SMART SM00344 1 117 9.8E-23 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 IX88_12835 d66b2389a3f338df0c939669ab78ad6c 157 SUPERFAMILY SSF54909 71 154 7.11E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel IX88_12835 d66b2389a3f338df0c939669ab78ad6c 157 Pfam PF01037 Lrp/AsnC ligand binding domain 74 148 2.1E-22 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IX88_12835 d66b2389a3f338df0c939669ab78ad6c 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 48 1.8E-13 T 11-10-2018 IX88_12835 d66b2389a3f338df0c939669ab78ad6c 157 Gene3D G3DSA:3.30.70.920 62 145 7.4E-22 T 11-10-2018 IX88_12835 d66b2389a3f338df0c939669ab78ad6c 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 3.7E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_12835 d66b2389a3f338df0c939669ab78ad6c 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 3.7E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_12835 d66b2389a3f338df0c939669ab78ad6c 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 3.7E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_12835 d66b2389a3f338df0c939669ab78ad6c 157 SUPERFAMILY SSF46785 6 97 2.07E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_12750 a4e2ad54e7615740ca041b480d326317 385 Gene3D G3DSA:1.20.1090.10 186 384 6.0E-61 T 11-10-2018 IX88_12750 a4e2ad54e7615740ca041b480d326317 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 375 1.3E-110 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 IX88_12750 a4e2ad54e7615740ca041b480d326317 385 Gene3D G3DSA:3.40.50.1970 1 185 5.2E-50 T 11-10-2018 IX88_12750 a4e2ad54e7615740ca041b480d326317 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 IX88_12750 a4e2ad54e7615740ca041b480d326317 385 SUPERFAMILY SSF56796 2 384 3.79E-116 T 11-10-2018 IX88_08355 cd8d3810f4db42eaaedbd41bb4d51094 199 Gene3D G3DSA:3.30.230.30 1 125 9.3E-45 T 11-10-2018 IPR036956 Impact, N-terminal domain superfamily IX88_08355 cd8d3810f4db42eaaedbd41bb4d51094 199 Pfam PF01205 Uncharacterized protein family UPF0029 16 116 2.0E-29 T 11-10-2018 IPR001498 Impact, N-terminal IX88_08355 cd8d3810f4db42eaaedbd41bb4d51094 199 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 71 100 - T 11-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site IX88_08355 cd8d3810f4db42eaaedbd41bb4d51094 199 Pfam PF09186 Domain of unknown function (DUF1949) 133 187 2.0E-5 T 11-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal IX88_08355 cd8d3810f4db42eaaedbd41bb4d51094 199 SUPERFAMILY SSF54980 128 194 3.6E-8 T 11-10-2018 IPR035647 EF-G domain III/V-like IX88_08355 cd8d3810f4db42eaaedbd41bb4d51094 199 SUPERFAMILY SSF54211 4 123 1.4E-39 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_12730 a28eb2fcf2b0457833d8b83382799815 376 Pfam PF02698 DUF218 domain 212 359 3.3E-21 T 11-10-2018 IPR003848 Domain of unknown function DUF218 IX88_00160 766187e2e2e374bc137dc7676879ab35 200 SUPERFAMILY SSF52166 7 196 1.96E-68 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 IX88_00160 766187e2e2e374bc137dc7676879ab35 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 2 200 32.569 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00160 766187e2e2e374bc137dc7676879ab35 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 11 196 2.1E-71 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00160 766187e2e2e374bc137dc7676879ab35 200 Gene3D G3DSA:3.40.1370.10 3 199 3.0E-65 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 IX88_00160 766187e2e2e374bc137dc7676879ab35 200 Pfam PF00573 Ribosomal protein L4/L1 family 11 196 1.9E-61 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 IX88_12795 927993bab2c175621797b29192036937 419 Gene3D G3DSA:3.40.710.30 14 407 6.7E-100 T 11-10-2018 IX88_12795 927993bab2c175621797b29192036937 419 SUPERFAMILY SSF56601 35 389 8.67E-69 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like IX88_12795 927993bab2c175621797b29192036937 419 Pfam PF00144 Beta-lactamase 35 385 2.1E-54 T 11-10-2018 IPR001466 Beta-lactamase-related IX88_05690 3920a9b7f5d019a2f49cb9e1f6f3a816 297 PIRSF PIRSF016184 1 292 3.5E-80 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 IX88_05690 3920a9b7f5d019a2f49cb9e1f6f3a816 297 Gene3D G3DSA:3.10.310.10 123 284 4.5E-88 T 11-10-2018 IX88_05690 3920a9b7f5d019a2f49cb9e1f6f3a816 297 Pfam PF02567 Phenazine biosynthesis-like protein 7 288 5.6E-69 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 IX88_05690 3920a9b7f5d019a2f49cb9e1f6f3a816 297 SUPERFAMILY SSF54506 3 289 2.47E-61 T 11-10-2018 IX88_05690 3920a9b7f5d019a2f49cb9e1f6f3a816 297 Gene3D G3DSA:3.10.310.10 5 286 4.5E-88 T 11-10-2018 IX88_05690 3920a9b7f5d019a2f49cb9e1f6f3a816 297 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 288 1.1E-81 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 IX88_03385 fdfc3d814a8f0cced15d6ca01b5eed21 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 6 354 1.9E-105 T 11-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 IX88_03385 fdfc3d814a8f0cced15d6ca01b5eed21 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 354 4.3E-66 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 IX88_03685 0396c3a7b55f1c37784aba17a516c3d6 165 Pfam PF14539 Domain of unknown function (DUF4442) 13 151 5.2E-17 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 IX88_03685 0396c3a7b55f1c37784aba17a516c3d6 165 Gene3D G3DSA:3.10.129.10 9 159 3.5E-29 T 11-10-2018 IX88_03685 0396c3a7b55f1c37784aba17a516c3d6 165 SUPERFAMILY SSF54637 11 158 9.82E-21 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_16060 89c8c98713f82f77cce9471ab547be1a 209 Pfam PF00551 Formyl transferase 2 177 6.9E-60 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 IX88_16060 89c8c98713f82f77cce9471ab547be1a 209 SUPERFAMILY SSF53328 2 199 1.18E-63 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 IX88_16060 89c8c98713f82f77cce9471ab547be1a 209 Gene3D G3DSA:3.40.50.170 1 205 2.1E-78 T 11-10-2018 IX88_16060 89c8c98713f82f77cce9471ab547be1a 209 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 186 2.1E-70 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 IX88_16060 89c8c98713f82f77cce9471ab547be1a 209 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 184 30.486 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 IX88_17555 dad62438763070a35fe1dd5931252246 219 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 11 211 3.2E-60 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 IX88_17555 dad62438763070a35fe1dd5931252246 219 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 9 216 40.072 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 IX88_17555 dad62438763070a35fe1dd5931252246 219 SUPERFAMILY SSF51366 10 213 9.1E-62 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 IX88_17555 dad62438763070a35fe1dd5931252246 219 Gene3D G3DSA:3.20.20.70 7 218 2.0E-67 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_01030 51085fb7b67c4fc4a15ad0595c3bdf3d 359 SMART SM00892 79 268 1.6E-44 T 11-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 IX88_01030 51085fb7b67c4fc4a15ad0595c3bdf3d 359 SUPERFAMILY SSF54060 54 275 4.88E-64 T 11-10-2018 IX88_01030 51085fb7b67c4fc4a15ad0595c3bdf3d 359 Pfam PF01223 DNA/RNA non-specific endonuclease 73 263 5.0E-44 T 11-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 IX88_01030 51085fb7b67c4fc4a15ad0595c3bdf3d 359 Gene3D G3DSA:3.40.570.10 63 282 1.1E-56 T 11-10-2018 IX88_01030 51085fb7b67c4fc4a15ad0595c3bdf3d 359 SMART SM00477 80 268 1.6E-40 T 11-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 IX88_01030 51085fb7b67c4fc4a15ad0595c3bdf3d 359 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 139 147 - T 11-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 IX88_06855 242bea425c5607749fa7067b9fee33b4 283 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 21 269 1.5E-38 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 IX88_06855 242bea425c5607749fa7067b9fee33b4 283 Gene3D G3DSA:3.40.50.970 6 281 6.7E-86 T 11-10-2018 IX88_06855 242bea425c5607749fa7067b9fee33b4 283 SUPERFAMILY SSF52518 11 277 4.01E-76 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_14740 c349019b092e8e1029d06640b6885274 292 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 13 291 6.5E-95 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 IX88_14740 c349019b092e8e1029d06640b6885274 292 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 8 292 28.102 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 IX88_14740 c349019b092e8e1029d06640b6885274 292 Gene3D G3DSA:1.10.357.140 26 171 1.7E-38 T 11-10-2018 IX88_14740 c349019b092e8e1029d06640b6885274 292 Pfam PF01040 UbiA prenyltransferase family 31 275 7.7E-56 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 IX88_14740 c349019b092e8e1029d06640b6885274 292 Gene3D G3DSA:1.20.120.1780 172 292 3.5E-12 T 11-10-2018 IX88_02790 b3adb908436fb49208ed4831975e53d0 367 TIGRFAM TIGR00492 alr: alanine racemase 3 362 1.2E-105 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_02790 b3adb908436fb49208ed4831975e53d0 367 Pfam PF01168 Alanine racemase, N-terminal domain 9 222 1.3E-61 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_02790 b3adb908436fb49208ed4831975e53d0 367 Pfam PF00842 Alanine racemase, C-terminal domain 238 362 8.8E-38 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_02790 b3adb908436fb49208ed4831975e53d0 367 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_02790 b3adb908436fb49208ed4831975e53d0 367 Hamap MF_01201 Alanine racemase. 2 366 31.231 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_02790 b3adb908436fb49208ed4831975e53d0 367 SUPERFAMILY SSF50621 231 362 1.19E-41 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 IX88_02790 b3adb908436fb49208ed4831975e53d0 367 SUPERFAMILY SSF51419 9 238 1.52E-58 T 11-10-2018 IPR029066 PLP-binding barrel IX88_02790 b3adb908436fb49208ed4831975e53d0 367 Gene3D G3DSA:3.20.20.10 11 220 1.1E-107 T 11-10-2018 IPR029066 PLP-binding barrel IX88_02790 b3adb908436fb49208ed4831975e53d0 367 Gene3D G3DSA:2.40.37.10 9 361 1.1E-107 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 IX88_02790 b3adb908436fb49208ed4831975e53d0 367 PRINTS PR00992 Alanine racemase signature 270 285 3.1E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_02790 b3adb908436fb49208ed4831975e53d0 367 PRINTS PR00992 Alanine racemase signature 121 133 3.1E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_02790 b3adb908436fb49208ed4831975e53d0 367 PRINTS PR00992 Alanine racemase signature 291 308 3.1E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_02790 b3adb908436fb49208ed4831975e53d0 367 PRINTS PR00992 Alanine racemase signature 155 166 3.1E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_02790 b3adb908436fb49208ed4831975e53d0 367 PRINTS PR00992 Alanine racemase signature 27 43 3.1E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_02790 b3adb908436fb49208ed4831975e53d0 367 PRINTS PR00992 Alanine racemase signature 61 79 3.1E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_02790 b3adb908436fb49208ed4831975e53d0 367 PRINTS PR00992 Alanine racemase signature 195 222 3.1E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_02790 b3adb908436fb49208ed4831975e53d0 367 PRINTS PR00992 Alanine racemase signature 253 268 3.1E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_02790 b3adb908436fb49208ed4831975e53d0 367 PRINTS PR00992 Alanine racemase signature 348 361 3.1E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_02790 b3adb908436fb49208ed4831975e53d0 367 SMART SM01005 237 366 3.3E-58 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 IX88_08325 c86704c32c3ac4f92829f866e1be3837 182 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 8 178 8.1E-33 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related IX88_08325 c86704c32c3ac4f92829f866e1be3837 182 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 178 6.1E-35 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 IX88_08325 c86704c32c3ac4f92829f866e1be3837 182 Gene3D G3DSA:2.60.450.10 58 182 1.6E-8 T 11-10-2018 IX88_02525 a1a963bd8c33f873eec43c5dd1865621 382 Pfam PF00487 Fatty acid desaturase 75 341 1.2E-31 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 IX88_17880 b38be6bf4bc0e8803dc375b518c88186 407 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 241 398 1.1E-39 T 11-10-2018 IPR000160 GGDEF domain IX88_17880 b38be6bf4bc0e8803dc375b518c88186 407 Pfam PF00990 Diguanylate cyclase, GGDEF domain 245 397 2.8E-45 T 11-10-2018 IPR000160 GGDEF domain IX88_17880 b38be6bf4bc0e8803dc375b518c88186 407 Gene3D G3DSA:3.30.70.270 229 403 9.2E-51 T 11-10-2018 IX88_17880 b38be6bf4bc0e8803dc375b518c88186 407 SUPERFAMILY SSF55073 250 402 1.33E-41 T 11-10-2018 IPR029787 Nucleotide cyclase IX88_17880 b38be6bf4bc0e8803dc375b518c88186 407 SMART SM00267 234 403 3.1E-53 T 11-10-2018 IPR000160 GGDEF domain IX88_17880 b38be6bf4bc0e8803dc375b518c88186 407 Pfam PF17152 Periplasmic sensor domain 43 141 4.2E-17 T 11-10-2018 IPR033417 Periplasmic sensor domain CHASE8 IX88_02225 0dedfa9a579163ef38e47e4fb6e70d55 451 SUPERFAMILY SSF116878 121 451 2.22E-49 T 11-10-2018 IX88_02225 0dedfa9a579163ef38e47e4fb6e70d55 451 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 451 1.2E-103 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 IX88_02225 0dedfa9a579163ef38e47e4fb6e70d55 451 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 451 32.325 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 IX88_02225 0dedfa9a579163ef38e47e4fb6e70d55 451 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 2.5E-36 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 IX88_02225 0dedfa9a579163ef38e47e4fb6e70d55 451 Pfam PF01926 50S ribosome-binding GTPase 218 311 1.4E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_02225 0dedfa9a579163ef38e47e4fb6e70d55 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 219 239 4.5E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_02225 0dedfa9a579163ef38e47e4fb6e70d55 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 286 304 4.5E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_02225 0dedfa9a579163ef38e47e4fb6e70d55 451 Gene3D G3DSA:1.20.120.430 122 451 2.1E-101 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 IX88_02225 0dedfa9a579163ef38e47e4fb6e70d55 451 Gene3D G3DSA:3.30.1360.120 1 121 2.1E-40 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 IX88_02225 0dedfa9a579163ef38e47e4fb6e70d55 451 Gene3D G3DSA:3.40.50.300 217 379 2.1E-101 T 11-10-2018 IX88_02225 0dedfa9a579163ef38e47e4fb6e70d55 451 Pfam PF12631 MnmE helical domain 123 448 1.4E-55 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 IX88_02225 0dedfa9a579163ef38e47e4fb6e70d55 451 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 218 370 2.6E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IX88_02225 0dedfa9a579163ef38e47e4fb6e70d55 451 SUPERFAMILY SSF52540 72 370 9.56E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_14440 f0986758b10a97c78100122f5efd95e0 220 SMART SM00448 1 112 4.4E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_14440 f0986758b10a97c78100122f5efd95e0 220 SUPERFAMILY SSF52172 1 179 2.78E-39 T 11-10-2018 IPR011006 CheY-like superfamily IX88_14440 f0986758b10a97c78100122f5efd95e0 220 Gene3D G3DSA:1.10.10.10 124 219 1.2E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_14440 f0986758b10a97c78100122f5efd95e0 220 Pfam PF00072 Response regulator receiver domain 3 113 4.1E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_14440 f0986758b10a97c78100122f5efd95e0 220 Gene3D G3DSA:3.40.50.2300 1 123 3.7E-37 T 11-10-2018 IX88_14440 f0986758b10a97c78100122f5efd95e0 220 SMART SM00862 145 216 1.2E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_14440 f0986758b10a97c78100122f5efd95e0 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.1E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_06605 cb9ba24d518248a1422ebb67671b0b4c 235 Pfam PF06912 Protein of unknown function (DUF1275) 21 216 6.6E-31 T 11-10-2018 IPR010699 Protein of unknown function DUF1275 IX88_04405 8d76e7e3ea64f1bcfa38eb5c76cdb85b 336 SMART SM00342 248 330 3.8E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_04405 8d76e7e3ea64f1bcfa38eb5c76cdb85b 336 Gene3D G3DSA:1.10.10.60 228 336 1.1E-25 T 11-10-2018 IX88_04405 8d76e7e3ea64f1bcfa38eb5c76cdb85b 336 SUPERFAMILY SSF46689 283 333 5.82E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_04405 8d76e7e3ea64f1bcfa38eb5c76cdb85b 336 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 202 8.6E-35 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal IX88_04405 8d76e7e3ea64f1bcfa38eb5c76cdb85b 336 Pfam PF12833 Helix-turn-helix domain 254 332 7.6E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_11030 ef6a606e31f8147b850662b4b2d6bd6e 322 SUPERFAMILY SSF64167 21 317 2.49E-41 T 11-10-2018 IX88_11030 ef6a606e31f8147b850662b4b2d6bd6e 322 Pfam PF01975 Survival protein SurE 23 242 7.9E-38 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 IX88_11030 ef6a606e31f8147b850662b4b2d6bd6e 322 Gene3D G3DSA:3.40.1210.10 21 317 2.7E-44 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 IX88_05365 664882856b3d7dc7df3578b8a6bbf3a8 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 4.4E-176 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_05365 664882856b3d7dc7df3578b8a6bbf3a8 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 1.2E-108 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 IX88_05365 664882856b3d7dc7df3578b8a6bbf3a8 418 Gene3D G3DSA:3.65.10.10 21 229 1.3E-176 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 IX88_05365 664882856b3d7dc7df3578b8a6bbf3a8 418 Gene3D G3DSA:3.65.10.10 6 414 1.3E-176 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 IX88_05365 664882856b3d7dc7df3578b8a6bbf3a8 418 SUPERFAMILY SSF55205 1 417 9.55E-144 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 IX88_05365 664882856b3d7dc7df3578b8a6bbf3a8 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 44.358 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_00545 7d46c65a3eac0a174b7c93cb9df77ad3 258 Pfam PF01925 Sulfite exporter TauE/SafE 12 249 2.2E-37 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 IX88_15900 15f73eec1cad172dec0f9028ad08df91 222 Gene3D G3DSA:3.40.50.620 3 218 2.4E-73 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_15900 15f73eec1cad172dec0f9028ad08df91 222 PIRSF PIRSF006293 1 222 2.4E-77 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 IX88_15900 15f73eec1cad172dec0f9028ad08df91 222 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 205 7.6E-63 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 IX88_15900 15f73eec1cad172dec0f9028ad08df91 222 Pfam PF06508 Queuosine biosynthesis protein QueC 4 212 1.2E-76 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 IX88_15900 15f73eec1cad172dec0f9028ad08df91 222 SUPERFAMILY SSF52402 4 222 2.87E-65 T 11-10-2018 IX88_15900 15f73eec1cad172dec0f9028ad08df91 222 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 218 54.364 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 IX88_00400 28572a0f40eb133be7719c9e12463487 451 Pfam PF00082 Subtilase family 160 404 8.8E-18 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 IX88_00400 28572a0f40eb133be7719c9e12463487 451 PRINTS PR00723 Subtilisin serine protease family (S8) signature 386 402 7.1E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related IX88_00400 28572a0f40eb133be7719c9e12463487 451 PRINTS PR00723 Subtilisin serine protease family (S8) signature 160 179 7.1E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related IX88_00400 28572a0f40eb133be7719c9e12463487 451 PRINTS PR00723 Subtilisin serine protease family (S8) signature 207 220 7.1E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related IX88_00400 28572a0f40eb133be7719c9e12463487 451 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 165 176 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site IX88_00400 28572a0f40eb133be7719c9e12463487 451 Gene3D G3DSA:3.40.50.200 137 435 4.4E-50 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 IX88_00400 28572a0f40eb133be7719c9e12463487 451 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 387 397 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site IX88_00400 28572a0f40eb133be7719c9e12463487 451 SUPERFAMILY SSF52743 142 432 1.1E-45 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 IX88_18070 057fc6c2fe918fefde1133b8ad9ac4af 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 159 322 1.3E-32 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 IX88_18070 057fc6c2fe918fefde1133b8ad9ac4af 328 Gene3D G3DSA:3.90.110.10 157 328 4.9E-61 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 IX88_18070 057fc6c2fe918fefde1133b8ad9ac4af 328 SUPERFAMILY SSF51735 3 157 6.69E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_18070 057fc6c2fe918fefde1133b8ad9ac4af 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 2 321 6.5E-145 T 11-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 IX88_18070 057fc6c2fe918fefde1133b8ad9ac4af 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 327 56.726 T 11-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 IX88_18070 057fc6c2fe918fefde1133b8ad9ac4af 328 SUPERFAMILY SSF56327 159 327 1.7E-58 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 IX88_18070 057fc6c2fe918fefde1133b8ad9ac4af 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 154 7.2E-36 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_18070 057fc6c2fe918fefde1133b8ad9ac4af 328 Gene3D G3DSA:3.40.50.720 1 156 6.0E-58 T 11-10-2018 IX88_18070 057fc6c2fe918fefde1133b8ad9ac4af 328 PIRSF PIRSF000102 1 326 1.7E-63 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 IX88_00295 039a75220282386a595cf82327a780f1 276 Gene3D G3DSA:3.40.190.80 145 274 1.7E-32 T 11-10-2018 IX88_00295 039a75220282386a595cf82327a780f1 276 SUPERFAMILY SSF56655 1 272 3.14E-75 T 11-10-2018 IX88_00295 039a75220282386a595cf82327a780f1 276 Pfam PF00459 Inositol monophosphatase family 2 264 1.8E-65 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IX88_00295 039a75220282386a595cf82327a780f1 276 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site IX88_00295 039a75220282386a595cf82327a780f1 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 1.6E-49 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IX88_00295 039a75220282386a595cf82327a780f1 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 218 242 1.6E-49 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IX88_00295 039a75220282386a595cf82327a780f1 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 134 157 1.6E-49 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IX88_00295 039a75220282386a595cf82327a780f1 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 1.6E-49 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IX88_00295 039a75220282386a595cf82327a780f1 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 1.6E-49 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IX88_00295 039a75220282386a595cf82327a780f1 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 187 208 1.6E-49 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IX88_00295 039a75220282386a595cf82327a780f1 276 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 221 235 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 IX88_00295 039a75220282386a595cf82327a780f1 276 Gene3D G3DSA:3.30.540.10 1 144 4.4E-45 T 11-10-2018 IX88_00895 df57d0219441b189716648b8c117221b 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 3.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_00895 df57d0219441b189716648b8c117221b 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 3.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_00895 df57d0219441b189716648b8c117221b 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_00895 df57d0219441b189716648b8c117221b 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 3.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_00895 df57d0219441b189716648b8c117221b 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 3.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_00895 df57d0219441b189716648b8c117221b 296 Gene3D G3DSA:3.40.50.720 2 261 5.9E-62 T 11-10-2018 IX88_00895 df57d0219441b189716648b8c117221b 296 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_00895 df57d0219441b189716648b8c117221b 296 Pfam PF00106 short chain dehydrogenase 16 205 2.0E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_00895 df57d0219441b189716648b8c117221b 296 SUPERFAMILY SSF51735 13 236 2.34E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_00895 df57d0219441b189716648b8c117221b 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 6.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_00895 df57d0219441b189716648b8c117221b 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 6.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_00895 df57d0219441b189716648b8c117221b 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 6.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06665 795910e732d86261028a1d091a744fac 204 Pfam PF01914 MarC family integral membrane protein 5 200 3.1E-17 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 IX88_17955 b72951800fcc5dd72c9554704c267764 142 SUPERFAMILY SSF101738 7 116 9.03E-49 T 11-10-2018 IPR036760 SspB-like superfamily IX88_17955 b72951800fcc5dd72c9554704c267764 142 Gene3D G3DSA:2.30.30.220 4 133 5.7E-53 T 11-10-2018 IPR036760 SspB-like superfamily IX88_17955 b72951800fcc5dd72c9554704c267764 142 PIRSF PIRSF005276 5 142 6.9E-54 T 11-10-2018 IPR007481 Stringent starvation protein B IX88_17955 b72951800fcc5dd72c9554704c267764 142 Pfam PF04386 Stringent starvation protein B 11 133 5.3E-37 T 11-10-2018 IPR007481 Stringent starvation protein B IX88_14525 21dcaa5f771415c27885a467e6119793 409 Gene3D G3DSA:3.40.50.1820 36 289 1.1E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_14525 21dcaa5f771415c27885a467e6119793 409 Pfam PF03583 Secretory lipase 126 371 6.3E-11 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 IX88_14525 21dcaa5f771415c27885a467e6119793 409 SUPERFAMILY SSF53474 81 395 2.77E-24 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_14525 21dcaa5f771415c27885a467e6119793 409 PIRSF PIRSF029171 1 409 1.7E-86 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 IX88_06345 2afc369c83742da9d9f85c628b4b16aa 243 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 243 77.492 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 IX88_06345 2afc369c83742da9d9f85c628b4b16aa 243 SUPERFAMILY SSF55729 5 227 4.61E-81 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_06345 2afc369c83742da9d9f85c628b4b16aa 243 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 34 202 1.7E-61 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 IX88_06345 2afc369c83742da9d9f85c628b4b16aa 243 Gene3D G3DSA:3.40.630.70 60 238 3.5E-56 T 11-10-2018 IX88_06345 2afc369c83742da9d9f85c628b4b16aa 243 Gene3D G3DSA:2.30.210.20 1 59 4.8E-22 T 11-10-2018 IX88_06345 2afc369c83742da9d9f85c628b4b16aa 243 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 34 214 1.5E-52 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 IX88_15615 9cd31153a080920b7eea65d4132f6763 428 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 337 3.0E-52 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_15615 9cd31153a080920b7eea65d4132f6763 428 Gene3D G3DSA:3.50.50.100 1 409 7.6E-109 T 11-10-2018 IX88_15615 9cd31153a080920b7eea65d4132f6763 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 8.1E-12 T 11-10-2018 IX88_15615 9cd31153a080920b7eea65d4132f6763 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 8.1E-12 T 11-10-2018 IX88_15615 9cd31153a080920b7eea65d4132f6763 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 8.1E-12 T 11-10-2018 IX88_15615 9cd31153a080920b7eea65d4132f6763 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 114 132 8.1E-12 T 11-10-2018 IX88_15615 9cd31153a080920b7eea65d4132f6763 428 SUPERFAMILY SSF51905 6 349 7.5E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_15615 9cd31153a080920b7eea65d4132f6763 428 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 4.0E-6 T 11-10-2018 IX88_15615 9cd31153a080920b7eea65d4132f6763 428 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 4.0E-6 T 11-10-2018 IX88_15615 9cd31153a080920b7eea65d4132f6763 428 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.0E-6 T 11-10-2018 IX88_06745 1b5d7435232755fa02382deeee551459 355 Pfam PF00355 Rieske [2Fe-2S] domain 22 112 1.0E-17 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 IX88_06745 1b5d7435232755fa02382deeee551459 355 Gene3D G3DSA:3.30.530.90 151 340 3.8E-7 T 11-10-2018 IX88_06745 1b5d7435232755fa02382deeee551459 355 SUPERFAMILY SSF50022 10 132 1.7E-32 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_06745 1b5d7435232755fa02382deeee551459 355 Gene3D G3DSA:2.102.10.10 19 150 8.7E-34 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_06745 1b5d7435232755fa02382deeee551459 355 SUPERFAMILY SSF55961 136 334 2.53E-41 T 11-10-2018 IX88_04965 312939ec68655cee65ae42e767c5a831 313 Gene3D G3DSA:3.90.640.20 205 299 1.1E-26 T 11-10-2018 IPR037126 PdaC/RsiV-like superfamily IX88_04965 312939ec68655cee65ae42e767c5a831 313 Pfam PF11738 Protein of unknown function (DUF3298) 207 285 2.2E-10 T 11-10-2018 IPR021729 Domain of unknown function DUF3298 IX88_04965 312939ec68655cee65ae42e767c5a831 313 Gene3D G3DSA:3.30.565.40 42 203 3.6E-29 T 11-10-2018 IX88_10760 8b049e001dc33d4093694e890c76e0c2 303 SUPERFAMILY SSF56281 1 303 2.46E-62 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_10760 8b049e001dc33d4093694e890c76e0c2 303 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 303 156.616 T 11-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B IX88_10760 8b049e001dc33d4093694e890c76e0c2 303 Gene3D G3DSA:3.60.15.10 1 303 4.1E-93 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_10760 8b049e001dc33d4093694e890c76e0c2 303 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 2 303 2.2E-144 T 11-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B IX88_10760 8b049e001dc33d4093694e890c76e0c2 303 Pfam PF12706 Beta-lactamase superfamily domain 51 270 9.4E-45 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_17255 184614c19d715e2af97535124fb13cb9 120 SMART SM00448 2 115 1.7E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_17255 184614c19d715e2af97535124fb13cb9 120 SUPERFAMILY SSF52172 1 120 1.2E-37 T 11-10-2018 IPR011006 CheY-like superfamily IX88_17255 184614c19d715e2af97535124fb13cb9 120 Gene3D G3DSA:3.40.50.12740 1 120 3.8E-42 T 11-10-2018 IX88_17255 184614c19d715e2af97535124fb13cb9 120 Pfam PF00072 Response regulator receiver domain 4 115 9.1E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_01200 49e9d261a8932d2a564467560e1011b9 182 Pfam PF07883 Cupin domain 110 172 3.9E-9 T 11-10-2018 IPR013096 Cupin 2, conserved barrel IX88_01200 49e9d261a8932d2a564467560e1011b9 182 SMART SM00530 11 66 6.1E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IX88_01200 49e9d261a8932d2a564467560e1011b9 182 Gene3D G3DSA:2.60.120.10 91 182 1.7E-15 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_01200 49e9d261a8932d2a564467560e1011b9 182 Gene3D G3DSA:1.10.260.40 2 77 1.3E-17 T 11-10-2018 IX88_01200 49e9d261a8932d2a564467560e1011b9 182 SUPERFAMILY SSF47413 5 72 3.1E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IX88_01200 49e9d261a8932d2a564467560e1011b9 182 Pfam PF01381 Helix-turn-helix 14 64 2.6E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IX88_01200 49e9d261a8932d2a564467560e1011b9 182 SUPERFAMILY SSF51182 59 178 1.64E-19 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_08760 1d2365f6e37d903d7f36092e796a0fca 438 SUPERFAMILY SSF56935 86 437 9.77E-21 T 11-10-2018 IX88_17655 7a430d6ea1bfdcf0d0554dbcdf9e2692 364 Gene3D G3DSA:3.40.50.2000 14 184 2.0E-36 T 11-10-2018 IX88_17655 7a430d6ea1bfdcf0d0554dbcdf9e2692 364 SUPERFAMILY SSF53756 4 363 2.35E-40 T 11-10-2018 IX88_17655 7a430d6ea1bfdcf0d0554dbcdf9e2692 364 Gene3D G3DSA:3.40.50.2000 185 338 2.0E-36 T 11-10-2018 IX88_17655 7a430d6ea1bfdcf0d0554dbcdf9e2692 364 Pfam PF00534 Glycosyl transferases group 1 191 338 3.9E-21 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 IX88_13475 ab052b66a5aee8ee33c5dd6f2e46ea8a 280 Pfam PF11906 Protein of unknown function (DUF3426) 138 277 2.5E-15 T 11-10-2018 IPR021834 Protein of unknown function DUF3426 IX88_13475 ab052b66a5aee8ee33c5dd6f2e46ea8a 280 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 6 40 2.4E-8 T 11-10-2018 IPR011723 Zinc finger/thioredoxin putative IX88_17045 03d0dac544fd51da9486bffdf4a978d7 244 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 42 237 4.1E-79 T 11-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 IX88_17045 03d0dac544fd51da9486bffdf4a978d7 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 36 213 8.7E-49 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 IX88_17045 03d0dac544fd51da9486bffdf4a978d7 244 SUPERFAMILY SSF52402 13 201 3.27E-49 T 11-10-2018 IX88_17045 03d0dac544fd51da9486bffdf4a978d7 244 Gene3D G3DSA:3.40.50.620 9 228 2.3E-69 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_17045 03d0dac544fd51da9486bffdf4a978d7 244 PIRSF PIRSF000857 6 244 3.7E-79 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 IX88_07830 ec2472cf395c85ac0ec8ca36719e59b9 358 Pfam PF00355 Rieske [2Fe-2S] domain 7 86 2.9E-18 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 IX88_07830 ec2472cf395c85ac0ec8ca36719e59b9 358 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 47 69 - T 11-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 IX88_07830 ec2472cf395c85ac0ec8ca36719e59b9 358 Gene3D G3DSA:2.102.10.10 3 130 1.2E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_07830 ec2472cf395c85ac0ec8ca36719e59b9 358 SUPERFAMILY SSF50022 2 111 6.29E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_07830 ec2472cf395c85ac0ec8ca36719e59b9 358 SUPERFAMILY SSF55961 117 342 9.42E-57 T 11-10-2018 IX88_07830 ec2472cf395c85ac0ec8ca36719e59b9 358 Gene3D G3DSA:3.30.530.90 131 347 2.0E-65 T 11-10-2018 IX88_02580 d750db4a48f4435f4db80574284ced14 142 SUPERFAMILY SSF52788 2 142 7.59E-41 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily IX88_02580 d750db4a48f4435f4db80574284ced14 142 Gene3D G3DSA:3.40.50.2300 1 142 1.9E-46 T 11-10-2018 IX88_02580 d750db4a48f4435f4db80574284ced14 142 SMART SM00226 4 141 3.0E-55 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I IX88_02580 d750db4a48f4435f4db80574284ced14 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 98 111 4.9E-18 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 IX88_02580 d750db4a48f4435f4db80574284ced14 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 4.9E-18 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 IX88_02580 d750db4a48f4435f4db80574284ced14 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 4.9E-18 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 IX88_02580 d750db4a48f4435f4db80574284ced14 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 42 58 4.9E-18 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 IX88_02580 d750db4a48f4435f4db80574284ced14 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 76 91 4.9E-18 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 IX88_02580 d750db4a48f4435f4db80574284ced14 142 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 138 6.6E-37 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I IX88_05585 875f86b709fe08a1ecc595605e57f212 177 Pfam PF04982 HPP family 46 166 1.4E-39 T 11-10-2018 IPR007065 HPP IX88_06830 e066d48b43ca428df8627c74916228bf 381 PIRSF PIRSF005096 19 380 8.3E-129 T 11-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 IX88_06830 e066d48b43ca428df8627c74916228bf 381 Gene3D G3DSA:2.70.98.10 17 380 9.1E-123 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 IX88_06830 e066d48b43ca428df8627c74916228bf 381 Pfam PF01263 Aldose 1-epimerase 38 376 9.2E-96 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 IX88_06830 e066d48b43ca428df8627c74916228bf 381 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 201 210 - T 11-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 IX88_06830 e066d48b43ca428df8627c74916228bf 381 SUPERFAMILY SSF74650 26 377 3.14E-110 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 IX88_03935 9c5c8de24297b751ad34638efa2429f1 408 Gene3D G3DSA:1.20.81.30 261 371 6.6E-28 T 11-10-2018 IX88_03935 9c5c8de24297b751ad34638efa2429f1 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 197 1.8E-31 T 11-10-2018 IPR018076 Type II secretion system F domain IX88_03935 9c5c8de24297b751ad34638efa2429f1 408 Pfam PF00482 Type II secretion system (T2SS), protein F 279 400 2.4E-28 T 11-10-2018 IPR018076 Type II secretion system F domain IX88_03935 9c5c8de24297b751ad34638efa2429f1 408 Gene3D G3DSA:1.20.81.30 59 176 4.2E-31 T 11-10-2018 IX88_03935 9c5c8de24297b751ad34638efa2429f1 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 70 82 3.0E-18 T 11-10-2018 IPR003004 GspF/PilC family IX88_03935 9c5c8de24297b751ad34638efa2429f1 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 373 387 3.0E-18 T 11-10-2018 IPR003004 GspF/PilC family IX88_03935 9c5c8de24297b751ad34638efa2429f1 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 389 408 3.0E-18 T 11-10-2018 IPR003004 GspF/PilC family IX88_03935 9c5c8de24297b751ad34638efa2429f1 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 169 197 3.0E-18 T 11-10-2018 IPR003004 GspF/PilC family IX88_03935 9c5c8de24297b751ad34638efa2429f1 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 169 197 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 IX88_02665 eb662372b6dad16e944648803f0d80e4 250 SUPERFAMILY SSF46785 2 70 5.24E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_02665 eb662372b6dad16e944648803f0d80e4 250 Gene3D G3DSA:1.10.10.10 1 67 2.2E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_02665 eb662372b6dad16e944648803f0d80e4 250 SMART SM00895 95 223 2.5E-21 T 11-10-2018 IPR011711 GntR, C-terminal IX88_02665 eb662372b6dad16e944648803f0d80e4 250 Pfam PF07729 FCD domain 96 222 1.5E-23 T 11-10-2018 IPR011711 GntR, C-terminal IX88_02665 eb662372b6dad16e944648803f0d80e4 250 SUPERFAMILY SSF48008 94 230 3.66E-28 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_02665 eb662372b6dad16e944648803f0d80e4 250 Gene3D G3DSA:1.20.120.530 94 229 3.5E-30 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_02665 eb662372b6dad16e944648803f0d80e4 250 SMART SM00345 7 66 1.7E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_02665 eb662372b6dad16e944648803f0d80e4 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 6.3E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_02665 eb662372b6dad16e944648803f0d80e4 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 3.9E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_02665 eb662372b6dad16e944648803f0d80e4 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 3.9E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_05095 194905b354a28efc219efd83f9dfbab6 463 Gene3D G3DSA:2.40.50.140 2 96 6.8E-19 T 11-10-2018 IX88_05095 194905b354a28efc219efd83f9dfbab6 463 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 16 458 68.448 T 11-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 IX88_05095 194905b354a28efc219efd83f9dfbab6 463 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 42 450 2.1E-96 T 11-10-2018 IX88_05095 194905b354a28efc219efd83f9dfbab6 463 Gene3D G3DSA:3.40.50.150 97 452 5.5E-110 T 11-10-2018 IX88_05095 194905b354a28efc219efd83f9dfbab6 463 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 108 457 1.4E-30 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 IX88_05095 194905b354a28efc219efd83f9dfbab6 463 SUPERFAMILY SSF50249 8 75 1.26E-8 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_05095 194905b354a28efc219efd83f9dfbab6 463 Gene3D G3DSA:3.40.1350.30 144 287 5.5E-110 T 11-10-2018 IX88_05095 194905b354a28efc219efd83f9dfbab6 463 SUPERFAMILY SSF53335 85 457 3.64E-81 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_05095 194905b354a28efc219efd83f9dfbab6 463 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 389 419 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site IX88_16320 5f45a2500fb64df2e6bc7285a3133d20 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 1.9E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_16320 5f45a2500fb64df2e6bc7285a3133d20 192 SUPERFAMILY SSF48498 80 184 1.16E-9 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_16320 5f45a2500fb64df2e6bc7285a3133d20 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.3E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_16320 5f45a2500fb64df2e6bc7285a3133d20 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.3E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_16320 5f45a2500fb64df2e6bc7285a3133d20 192 Gene3D G3DSA:1.10.357.10 2 189 1.0E-35 T 11-10-2018 IX88_16320 5f45a2500fb64df2e6bc7285a3133d20 192 SUPERFAMILY SSF46689 7 85 1.49E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_08770 068094bf2b9d8dcdb6577dc3f7d36ba4 144 SUPERFAMILY SSF54637 4 140 1.32E-34 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_08770 068094bf2b9d8dcdb6577dc3f7d36ba4 144 Gene3D G3DSA:3.10.129.10 7 144 6.6E-35 T 11-10-2018 IX88_08770 068094bf2b9d8dcdb6577dc3f7d36ba4 144 Pfam PF03061 Thioesterase superfamily 56 132 5.9E-12 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 IX88_08770 068094bf2b9d8dcdb6577dc3f7d36ba4 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 140 7.3E-18 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 IX88_11095 8bd82d8e1604790e7b588df893f53ad8 262 Pfam PF12833 Helix-turn-helix domain 176 254 2.6E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_11095 8bd82d8e1604790e7b588df893f53ad8 262 SMART SM00342 170 252 7.7E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_11095 8bd82d8e1604790e7b588df893f53ad8 262 SUPERFAMILY SSF46689 210 256 3.72E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_11095 8bd82d8e1604790e7b588df893f53ad8 262 Pfam PF02311 AraC-like ligand binding domain 30 137 1.8E-5 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 IX88_11095 8bd82d8e1604790e7b588df893f53ad8 262 Gene3D G3DSA:1.10.10.60 156 258 1.5E-19 T 11-10-2018 IX88_11095 8bd82d8e1604790e7b588df893f53ad8 262 Gene3D G3DSA:2.60.120.10 16 99 3.1E-6 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_11095 8bd82d8e1604790e7b588df893f53ad8 262 SUPERFAMILY SSF51182 22 186 6.99E-13 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_09985 435da713652090272219636aa8c8afd6 219 Gene3D G3DSA:3.90.1680.10 2 209 4.6E-44 T 11-10-2018 IPR036590 SOS response associated peptidase-like IX88_09985 435da713652090272219636aa8c8afd6 219 Pfam PF02586 SOS response associated peptidase (SRAP) 44 206 1.2E-24 T 11-10-2018 IPR003738 SOS response associated peptidase (SRAP) IX88_09985 435da713652090272219636aa8c8afd6 219 SUPERFAMILY SSF143081 21 203 1.57E-43 T 11-10-2018 IPR036590 SOS response associated peptidase-like IX88_12090 c12e97f3e2797031fcd5547bc7c5d7af 184 SUPERFAMILY SSF55194 1 184 4.06E-65 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 IX88_12090 c12e97f3e2797031fcd5547bc7c5d7af 184 Gene3D G3DSA:1.10.132.20 12 181 5.0E-61 T 11-10-2018 IX88_12090 c12e97f3e2797031fcd5547bc7c5d7af 184 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 184 6.8E-64 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 IX88_12090 c12e97f3e2797031fcd5547bc7c5d7af 184 Pfam PF01765 Ribosome recycling factor 21 182 3.8E-58 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 IX88_12090 c12e97f3e2797031fcd5547bc7c5d7af 184 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 184 25.201 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 IX88_12090 c12e97f3e2797031fcd5547bc7c5d7af 184 Gene3D G3DSA:3.30.1360.40 31 104 5.0E-61 T 11-10-2018 IX88_09095 5d8db2089bc69cd9342bbcacdffb27e7 200 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 7 198 1.4E-48 T 11-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 IX88_09095 5d8db2089bc69cd9342bbcacdffb27e7 200 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 7 197 7.0E-48 T 11-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 IX88_14690 806cea6015a92e91e4524c98eb63abfc 412 Gene3D G3DSA:1.10.3090.10 122 411 4.2E-46 T 11-10-2018 IX88_14690 806cea6015a92e91e4524c98eb63abfc 412 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 53.019 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 IX88_14690 806cea6015a92e91e4524c98eb63abfc 412 Gene3D G3DSA:3.30.460.10 1 121 1.1E-30 T 11-10-2018 IX88_14690 806cea6015a92e91e4524c98eb63abfc 412 Hamap MF_01262 CCA-adding enzyme [cca]. 1 400 40.838 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 IX88_14690 806cea6015a92e91e4524c98eb63abfc 412 SUPERFAMILY SSF81891 120 400 3.14E-55 T 11-10-2018 IX88_14690 806cea6015a92e91e4524c98eb63abfc 412 SUPERFAMILY SSF81301 1 119 5.23E-32 T 11-10-2018 IX88_14690 806cea6015a92e91e4524c98eb63abfc 412 PIRSF PIRSF000813 1 407 3.9E-191 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 IX88_14690 806cea6015a92e91e4524c98eb63abfc 412 Pfam PF01743 Poly A polymerase head domain 3 122 2.0E-20 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 IX88_14690 806cea6015a92e91e4524c98eb63abfc 412 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 3.0E-17 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 IX88_07490 15ce7b84a9a09e4641680dcf84bb58c6 298 Gene3D G3DSA:3.30.70.100 21 100 5.7E-5 T 11-10-2018 IX88_07490 15ce7b84a9a09e4641680dcf84bb58c6 298 Pfam PF01545 Cation efflux family 124 294 6.5E-14 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 IX88_07490 15ce7b84a9a09e4641680dcf84bb58c6 298 Gene3D G3DSA:1.20.1510.10 122 296 2.3E-12 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily IX88_07490 15ce7b84a9a09e4641680dcf84bb58c6 298 SUPERFAMILY SSF161111 121 294 2.62E-32 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily IX88_07490 15ce7b84a9a09e4641680dcf84bb58c6 298 Pfam PF00403 Heavy-metal-associated domain 34 83 1.4E-5 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 IX88_07490 15ce7b84a9a09e4641680dcf84bb58c6 298 SUPERFAMILY SSF55008 33 95 1.17E-9 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 IX88_17580 dfc157feafcbc222f44d406c3c0acd38 390 Pfam PF00487 Fatty acid desaturase 42 270 9.1E-21 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 IX88_17580 dfc157feafcbc222f44d406c3c0acd38 390 PIRSF PIRSF000345 1 357 2.0E-95 T 11-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 IX88_17580 dfc157feafcbc222f44d406c3c0acd38 390 PRINTS PR00075 Fatty acid desaturase family 1 signature 39 61 9.3E-36 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 IX88_17580 dfc157feafcbc222f44d406c3c0acd38 390 PRINTS PR00075 Fatty acid desaturase family 1 signature 100 129 9.3E-36 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 IX88_17580 dfc157feafcbc222f44d406c3c0acd38 390 PRINTS PR00075 Fatty acid desaturase family 1 signature 232 246 9.3E-36 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 IX88_17580 dfc157feafcbc222f44d406c3c0acd38 390 PRINTS PR00075 Fatty acid desaturase family 1 signature 62 82 9.3E-36 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 IX88_17580 dfc157feafcbc222f44d406c3c0acd38 390 PRINTS PR00075 Fatty acid desaturase family 1 signature 189 210 9.3E-36 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 IX88_00705 5a6735a6d49e62e9ffee0db26e320af5 360 Gene3D G3DSA:3.40.50.1970 1 171 1.7E-65 T 11-10-2018 IX88_00705 5a6735a6d49e62e9ffee0db26e320af5 360 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 69.355 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 IX88_00705 5a6735a6d49e62e9ffee0db26e320af5 360 SUPERFAMILY SSF56796 3 354 1.57E-111 T 11-10-2018 IX88_00705 5a6735a6d49e62e9ffee0db26e320af5 360 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 16 352 2.5E-113 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 IX88_00705 5a6735a6d49e62e9ffee0db26e320af5 360 PIRSF PIRSF001455 7 359 3.2E-104 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 IX88_00705 5a6735a6d49e62e9ffee0db26e320af5 360 Pfam PF01761 3-dehydroquinate synthase 66 323 7.0E-107 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 IX88_00705 5a6735a6d49e62e9ffee0db26e320af5 360 Gene3D G3DSA:1.20.1090.10 172 360 2.0E-75 T 11-10-2018 IX88_10850 97f23d128009ca057e7c60872f75d141 177 SUPERFAMILY SSF49401 24 177 1.89E-25 T 11-10-2018 IPR008966 Adhesion domain superfamily IX88_10850 97f23d128009ca057e7c60872f75d141 177 Gene3D G3DSA:2.60.40.1090 21 177 3.5E-32 T 11-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 IX88_10850 97f23d128009ca057e7c60872f75d141 177 Pfam PF16970 Type-1 fimbrial protein, A 50 177 9.4E-23 T 11-10-2018 IPR039458 Type-1 fimbrial protein, A IX88_12315 ddc0894709e85770fe310ef993202354 211 Gene3D G3DSA:3.90.1680.10 1 208 1.1E-51 T 11-10-2018 IPR036590 SOS response associated peptidase-like IX88_12315 ddc0894709e85770fe310ef993202354 211 Pfam PF02586 SOS response associated peptidase (SRAP) 24 187 3.0E-21 T 11-10-2018 IPR003738 SOS response associated peptidase (SRAP) IX88_12315 ddc0894709e85770fe310ef993202354 211 SUPERFAMILY SSF143081 21 199 1.31E-46 T 11-10-2018 IPR036590 SOS response associated peptidase-like IX88_00620 109b439aeb5b464f7660a8490363f669 316 Gene3D G3DSA:3.40.50.11270 12 96 5.4E-114 T 11-10-2018 IX88_00620 109b439aeb5b464f7660a8490363f669 316 Gene3D G3DSA:3.40.1010.20 97 197 5.4E-114 T 11-10-2018 IX88_00620 109b439aeb5b464f7660a8490363f669 316 Pfam PF02401 LytB protein 3 283 4.2E-95 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 IX88_00620 109b439aeb5b464f7660a8490363f669 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 38.725 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 IX88_00620 109b439aeb5b464f7660a8490363f669 316 Gene3D G3DSA:3.40.1010.20 6 283 5.4E-114 T 11-10-2018 IX88_00620 109b439aeb5b464f7660a8490363f669 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 1.6E-101 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 IX88_04605 edc7829010f3ddb83eb99db60717a68a 272 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 137 149 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 IX88_04605 edc7829010f3ddb83eb99db60717a68a 272 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 257 5.5E-75 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 IX88_04605 edc7829010f3ddb83eb99db60717a68a 272 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 262 19.589 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 IX88_04605 edc7829010f3ddb83eb99db60717a68a 272 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 262 1.7E-78 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 IX88_05450 048574868538c44b6651ebc8060ff839 221 Gene3D G3DSA:3.30.420.40 3 207 9.7E-58 T 11-10-2018 IX88_05450 048574868538c44b6651ebc8060ff839 221 SUPERFAMILY SSF53067 1 103 1.81E-23 T 11-10-2018 IX88_05450 048574868538c44b6651ebc8060ff839 221 Pfam PF00814 Glycoprotease family 33 128 1.2E-23 T 11-10-2018 IPR000905 Gcp-like domain IX88_05450 048574868538c44b6651ebc8060ff839 221 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 207 4.1E-51 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 IX88_05450 048574868538c44b6651ebc8060ff839 221 Gene3D G3DSA:3.30.420.40 95 176 9.7E-58 T 11-10-2018 IX88_05450 048574868538c44b6651ebc8060ff839 221 SUPERFAMILY SSF53067 111 205 7.77E-14 T 11-10-2018 IX88_05560 17f5c8a93f1feafe23df51b39626bf4b 315 SUPERFAMILY SSF53850 92 310 1.07E-31 T 11-10-2018 IX88_05560 17f5c8a93f1feafe23df51b39626bf4b 315 Gene3D G3DSA:1.10.10.10 9 74 5.9E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_05560 17f5c8a93f1feafe23df51b39626bf4b 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.8E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_05560 17f5c8a93f1feafe23df51b39626bf4b 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.8E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_05560 17f5c8a93f1feafe23df51b39626bf4b 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.8E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_05560 17f5c8a93f1feafe23df51b39626bf4b 315 Pfam PF03466 LysR substrate binding domain 91 306 3.3E-28 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_05560 17f5c8a93f1feafe23df51b39626bf4b 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 9.0E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_05560 17f5c8a93f1feafe23df51b39626bf4b 315 Gene3D G3DSA:3.40.190.10 191 279 5.4E-21 T 11-10-2018 IX88_05560 17f5c8a93f1feafe23df51b39626bf4b 315 Gene3D G3DSA:3.40.190.10 85 190 4.5E-24 T 11-10-2018 IX88_05560 17f5c8a93f1feafe23df51b39626bf4b 315 SUPERFAMILY SSF46785 3 83 6.15E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_13845 6847755e516e4e6e1bef0d7acff481b3 585 Gene3D G3DSA:2.40.160.50 198 585 1.8E-106 T 11-10-2018 IX88_13845 6847755e516e4e6e1bef0d7acff481b3 585 Gene3D G3DSA:3.10.20.310 65 166 8.5E-8 T 11-10-2018 IX88_13845 6847755e516e4e6e1bef0d7acff481b3 585 Pfam PF17287 POTRA domain 167 221 6.3E-17 T 11-10-2018 IPR035251 ShlB, POTRA domain IX88_13845 6847755e516e4e6e1bef0d7acff481b3 585 PIRSF PIRSF029745 6 585 1.7E-180 T 11-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 IX88_13845 6847755e516e4e6e1bef0d7acff481b3 585 Pfam PF08479 POTRA domain, ShlB-type 87 166 7.4E-19 T 11-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type IX88_13845 6847755e516e4e6e1bef0d7acff481b3 585 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 229 547 1.8E-108 T 11-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal IX88_08575 da21fd621a801174588ea9a1dc037a1f 200 SUPERFAMILY SSF46689 12 69 2.62E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_08575 da21fd621a801174588ea9a1dc037a1f 200 Gene3D G3DSA:1.10.357.10 8 184 2.4E-20 T 11-10-2018 IX88_08575 da21fd621a801174588ea9a1dc037a1f 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 57 4.2E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_08575 da21fd621a801174588ea9a1dc037a1f 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 3.1E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_08575 da21fd621a801174588ea9a1dc037a1f 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 3.1E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_13375 725eb08aad4ebb081da59b71f0281561 251 Pfam PF06271 RDD family 88 245 2.6E-22 T 11-10-2018 IPR010432 RDD IX88_13375 725eb08aad4ebb081da59b71f0281561 251 Pfam PF14237 Domain of unknown function (DUF4339) 4 46 9.9E-16 T 11-10-2018 IPR025640 Domain of unknown function DUF4339 Reactome: R-HSA-6798695 IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 SUPERFAMILY SSF51230 2 92 7.46E-22 T 11-10-2018 IPR011053 Single hybrid motif IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 23 52 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 Gene3D G3DSA:4.10.320.10 351 401 2.2E-16 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 Gene3D G3DSA:3.30.559.10 421 660 2.8E-78 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 Pfam PF02817 e3 binding domain 361 395 1.1E-11 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 253 282 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 Gene3D G3DSA:2.40.50.100 230 308 8.8E-20 T 11-10-2018 IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 Gene3D G3DSA:2.40.50.100 1 78 2.0E-19 T 11-10-2018 IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 434 659 3.4E-69 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 SUPERFAMILY SSF51230 115 207 1.96E-20 T 11-10-2018 IPR011053 Single hybrid motif IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 139 168 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 Pfam PF00364 Biotin-requiring enzyme 232 302 3.8E-17 T 11-10-2018 IPR000089 Biotin/lipoyl attachment IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 Pfam PF00364 Biotin-requiring enzyme 2 72 1.7E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 Pfam PF00364 Biotin-requiring enzyme 118 187 6.6E-16 T 11-10-2018 IPR000089 Biotin/lipoyl attachment IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 Gene3D G3DSA:2.40.50.100 117 194 1.2E-16 T 11-10-2018 IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 SUPERFAMILY SSF51230 230 322 9.42E-23 T 11-10-2018 IPR011053 Single hybrid motif IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 SUPERFAMILY SSF52777 423 660 4.89E-74 T 11-10-2018 IX88_01415 c51535cb2dba4d7553dd1b9b8b75ac67 660 SUPERFAMILY SSF47005 357 400 7.19E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 IX88_09165 544184a00abff01bec18ba6484065ddc 340 Gene3D G3DSA:3.40.190.10 119 216 3.5E-54 T 11-10-2018 IX88_09165 544184a00abff01bec18ba6484065ddc 340 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 40 264 5.1E-20 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 IX88_09165 544184a00abff01bec18ba6484065ddc 340 SMART SM00062 41 257 3.0E-14 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IX88_09165 544184a00abff01bec18ba6484065ddc 340 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 42 338 6.0E-121 T 11-10-2018 IPR010068 Taurine ABC transporter, substrate-binding protein TauA GO:0015734|GO:0042597 IX88_09165 544184a00abff01bec18ba6484065ddc 340 Gene3D G3DSA:1.10.8.450 252 283 3.5E-54 T 11-10-2018 IX88_09165 544184a00abff01bec18ba6484065ddc 340 Gene3D G3DSA:3.40.190.10 43 251 3.5E-54 T 11-10-2018 IX88_09165 544184a00abff01bec18ba6484065ddc 340 SUPERFAMILY SSF53850 38 262 2.6E-44 T 11-10-2018 IX88_08940 cd8acc8a6b84e563a236897b724e13bd 319 ProSitePatterns PS00622 LuxR-type HTH domain signature. 271 298 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_08940 cd8acc8a6b84e563a236897b724e13bd 319 Gene3D G3DSA:1.10.10.10 255 317 5.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_08940 cd8acc8a6b84e563a236897b724e13bd 319 SMART SM00421 254 311 3.7E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_08940 cd8acc8a6b84e563a236897b724e13bd 319 Pfam PF00196 Bacterial regulatory proteins, luxR family 256 309 1.3E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_08940 cd8acc8a6b84e563a236897b724e13bd 319 SUPERFAMILY SSF52172 12 149 2.42E-37 T 11-10-2018 IPR011006 CheY-like superfamily IX88_08940 cd8acc8a6b84e563a236897b724e13bd 319 Pfam PF00072 Response regulator receiver domain 19 130 2.6E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_08940 cd8acc8a6b84e563a236897b724e13bd 319 Gene3D G3DSA:3.40.50.12740 16 222 4.2E-41 T 11-10-2018 IX88_08940 cd8acc8a6b84e563a236897b724e13bd 319 SMART SM00448 17 130 4.9E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_08940 cd8acc8a6b84e563a236897b724e13bd 319 SUPERFAMILY SSF46894 245 311 1.84E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 IX88_08940 cd8acc8a6b84e563a236897b724e13bd 319 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 287 299 5.2E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_08940 cd8acc8a6b84e563a236897b724e13bd 319 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 257 271 5.2E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_08940 cd8acc8a6b84e563a236897b724e13bd 319 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 271 287 5.2E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 IX88_06130 ccf3ca71dc75d733815cbc500f575b72 98 SUPERFAMILY SSF50715 6 97 7.32E-27 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 IX88_06130 ccf3ca71dc75d733815cbc500f575b72 98 Gene3D G3DSA:2.40.240.10 3 98 6.4E-30 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 IX88_06130 ccf3ca71dc75d733815cbc500f575b72 98 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 17 97 7.0E-39 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 IX88_06130 ccf3ca71dc75d733815cbc500f575b72 98 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 4 98 24.91 T 11-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 IX88_06130 ccf3ca71dc75d733815cbc500f575b72 98 Pfam PF01386 Ribosomal L25p family 6 95 5.5E-26 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 IX88_11220 e1ed0ba8afaf4b3da1e0b18e76f2a910 292 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 13 256 8.4E-77 T 11-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region IX88_11220 e1ed0ba8afaf4b3da1e0b18e76f2a910 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 14 31 6.3E-38 T 11-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) IX88_11220 e1ed0ba8afaf4b3da1e0b18e76f2a910 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 91 112 6.3E-38 T 11-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) IX88_11220 e1ed0ba8afaf4b3da1e0b18e76f2a910 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 196 213 6.3E-38 T 11-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) IX88_11220 e1ed0ba8afaf4b3da1e0b18e76f2a910 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 155 175 6.3E-38 T 11-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) IX88_11220 e1ed0ba8afaf4b3da1e0b18e76f2a910 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 132 154 6.3E-38 T 11-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) IX88_11220 e1ed0ba8afaf4b3da1e0b18e76f2a910 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 238 256 6.3E-38 T 11-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) IX88_11220 e1ed0ba8afaf4b3da1e0b18e76f2a910 292 SUPERFAMILY SSF63829 7 282 5.72E-59 T 11-10-2018 IX88_11220 e1ed0ba8afaf4b3da1e0b18e76f2a910 292 Gene3D G3DSA:2.120.10.30 1 292 3.6E-92 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like IX88_05070 dff43f157488c890e118f983c5e32f35 288 Gene3D G3DSA:1.10.1040.10 165 288 4.5E-31 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 IX88_05070 dff43f157488c890e118f983c5e32f35 288 PIRSF PIRSF000103 2 288 7.6E-58 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 IX88_05070 dff43f157488c890e118f983c5e32f35 288 Gene3D G3DSA:3.40.50.720 2 164 1.3E-40 T 11-10-2018 IX88_05070 dff43f157488c890e118f983c5e32f35 288 SUPERFAMILY SSF51735 8 163 2.48E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_05070 dff43f157488c890e118f983c5e32f35 288 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 285 1.2E-22 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 IX88_05070 dff43f157488c890e118f983c5e32f35 288 SUPERFAMILY SSF48179 163 287 3.66E-28 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 IX88_05070 dff43f157488c890e118f983c5e32f35 288 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 162 1.4E-40 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 IX88_14505 28459c8c1653081397eb0e6582a18060 405 SUPERFAMILY SSF111369 59 299 3.66E-69 T 11-10-2018 IX88_14505 28459c8c1653081397eb0e6582a18060 405 Gene3D G3DSA:2.40.30.170 57 304 1.8E-101 T 11-10-2018 IX88_14505 28459c8c1653081397eb0e6582a18060 405 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 294 6.6E-17 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IX88_14505 28459c8c1653081397eb0e6582a18060 405 Gene3D G3DSA:2.40.50.100 70 215 1.8E-101 T 11-10-2018 IX88_14505 28459c8c1653081397eb0e6582a18060 405 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 375 5.4E-87 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 IX88_14505 28459c8c1653081397eb0e6582a18060 405 Gene3D G3DSA:2.40.420.20 305 373 1.8E-101 T 11-10-2018 IX88_14505 28459c8c1653081397eb0e6582a18060 405 Gene3D G3DSA:1.10.287.470 105 178 1.8E-101 T 11-10-2018 IX88_13745 cca79ae55b0a76c2814d9a2bbf854f3f 278 Pfam PF02311 AraC-like ligand binding domain 15 102 6.5E-23 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 IX88_13745 cca79ae55b0a76c2814d9a2bbf854f3f 278 SMART SM00342 188 270 8.6E-24 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_13745 cca79ae55b0a76c2814d9a2bbf854f3f 278 SUPERFAMILY SSF51215 12 137 7.98E-25 T 11-10-2018 IPR037923 Transcription regulator HTH-like IX88_13745 cca79ae55b0a76c2814d9a2bbf854f3f 278 Pfam PF12833 Helix-turn-helix domain 195 271 5.4E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_13745 cca79ae55b0a76c2814d9a2bbf854f3f 278 SUPERFAMILY SSF46689 224 271 2.78E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_13745 cca79ae55b0a76c2814d9a2bbf854f3f 278 SUPERFAMILY SSF46689 174 222 3.53E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_13745 cca79ae55b0a76c2814d9a2bbf854f3f 278 Gene3D G3DSA:1.10.10.60 167 275 1.1E-27 T 11-10-2018 IX88_07270 ecead9497ffcc320c81dc7be172afdf2 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 7.5E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_07270 ecead9497ffcc320c81dc7be172afdf2 296 SUPERFAMILY SSF53850 101 292 2.71E-16 T 11-10-2018 IX88_07270 ecead9497ffcc320c81dc7be172afdf2 296 Gene3D G3DSA:1.10.10.10 1 82 2.6E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_07270 ecead9497ffcc320c81dc7be172afdf2 296 Gene3D G3DSA:3.40.190.290 88 296 4.2E-72 T 11-10-2018 IX88_07270 ecead9497ffcc320c81dc7be172afdf2 296 Pfam PF03466 LysR substrate binding domain 103 291 4.3E-11 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_07270 ecead9497ffcc320c81dc7be172afdf2 296 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 294 9.7E-108 T 11-10-2018 IPR017685 HTH-type transcriptional regulator ArgP IX88_07270 ecead9497ffcc320c81dc7be172afdf2 296 SUPERFAMILY SSF46785 1 108 1.63E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_01925 cd6a508e6318a24c44dfc33000d020a6 421 Pfam PF12002 MgsA AAA+ ATPase C terminal 251 410 3.7E-67 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal IX88_01925 cd6a508e6318a24c44dfc33000d020a6 421 Pfam PF16193 AAA C-terminal domain 181 250 3.3E-22 T 11-10-2018 IPR032423 AAA C-terminal domain IX88_01925 cd6a508e6318a24c44dfc33000d020a6 421 Gene3D G3DSA:1.10.3710.10 329 421 2.9E-30 T 11-10-2018 IX88_01925 cd6a508e6318a24c44dfc33000d020a6 421 SUPERFAMILY SSF48019 236 418 1.76E-72 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 IX88_01925 cd6a508e6318a24c44dfc33000d020a6 421 Gene3D G3DSA:3.40.50.300 1 152 1.9E-43 T 11-10-2018 IX88_01925 cd6a508e6318a24c44dfc33000d020a6 421 Gene3D G3DSA:1.20.272.10 224 328 4.8E-45 T 11-10-2018 IX88_01925 cd6a508e6318a24c44dfc33000d020a6 421 SMART SM00382 41 153 7.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_01925 cd6a508e6318a24c44dfc33000d020a6 421 SUPERFAMILY SSF52540 4 219 2.66E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_01925 cd6a508e6318a24c44dfc33000d020a6 421 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 45 147 2.3E-15 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IX88_01925 cd6a508e6318a24c44dfc33000d020a6 421 Gene3D G3DSA:1.10.8.60 153 223 7.1E-7 T 11-10-2018 IX88_08005 e660cd98d19d8a8fb8648e430d2d9df9 268 Gene3D G3DSA:2.70.70.10 111 267 8.9E-51 T 11-10-2018 IPR011055 Duplicated hybrid motif IX88_08005 e660cd98d19d8a8fb8648e430d2d9df9 268 Gene3D G3DSA:2.60.40.1590 20 110 7.1E-20 T 11-10-2018 IX88_08005 e660cd98d19d8a8fb8648e430d2d9df9 268 Pfam PF01551 Peptidase family M23 166 260 3.9E-30 T 11-10-2018 IPR016047 Peptidase M23 IX88_08005 e660cd98d19d8a8fb8648e430d2d9df9 268 SUPERFAMILY SSF51261 91 264 3.66E-50 T 11-10-2018 IPR011055 Duplicated hybrid motif IX88_04885 7cdda4ea061d33a94bc69cbcaa2193b1 446 Gene3D G3DSA:1.10.287.470 94 185 1.6E-77 T 11-10-2018 IX88_04885 7cdda4ea061d33a94bc69cbcaa2193b1 446 Gene3D G3DSA:2.40.30.170 49 312 1.6E-77 T 11-10-2018 IX88_04885 7cdda4ea061d33a94bc69cbcaa2193b1 446 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 329 1.7E-39 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 IX88_04885 7cdda4ea061d33a94bc69cbcaa2193b1 446 Gene3D G3DSA:2.40.420.20 44 330 1.6E-77 T 11-10-2018 IX88_04885 7cdda4ea061d33a94bc69cbcaa2193b1 446 Gene3D G3DSA:2.40.50.100 60 222 1.6E-77 T 11-10-2018 IX88_04885 7cdda4ea061d33a94bc69cbcaa2193b1 446 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 250 2.9E-14 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IX88_04885 7cdda4ea061d33a94bc69cbcaa2193b1 446 Gene3D G3DSA:2.40.420.20 369 441 6.2E-7 T 11-10-2018 IX88_04885 7cdda4ea061d33a94bc69cbcaa2193b1 446 SUPERFAMILY SSF111369 52 247 1.96E-22 T 11-10-2018 IX88_16500 f8197a59818a077f031332052735736c 610 PIRSF PIRSF001348 1 608 4.5E-274 T 11-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 IX88_16500 f8197a59818a077f031332052735736c 610 Gene3D G3DSA:2.170.8.10 53 395 9.1E-263 T 11-10-2018 IX88_16500 f8197a59818a077f031332052735736c 610 Gene3D G3DSA:3.40.449.10 18 240 9.1E-263 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 IX88_16500 f8197a59818a077f031332052735736c 610 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 6 607 51.583 T 11-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 IX88_16500 f8197a59818a077f031332052735736c 610 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 241 603 3.3E-168 T 11-10-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 IX88_16500 f8197a59818a077f031332052735736c 610 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 265 273 - T 11-10-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 IX88_16500 f8197a59818a077f031332052735736c 610 Gene3D G3DSA:3.90.228.20 241 601 9.1E-263 T 11-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 IX88_16500 f8197a59818a077f031332052735736c 610 SUPERFAMILY SSF68923 4 240 3.71E-100 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 IX88_16500 f8197a59818a077f031332052735736c 610 SUPERFAMILY SSF53795 241 606 5.04E-156 T 11-10-2018 IX88_16500 f8197a59818a077f031332052735736c 610 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 18 237 3.1E-103 T 11-10-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 IX88_17565 6df92bcffb12131069c31d6282742ba2 192 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 185 3.1E-51 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 IX88_17565 6df92bcffb12131069c31d6282742ba2 192 Gene3D G3DSA:1.20.1200.10 17 189 1.6E-54 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 IX88_17565 6df92bcffb12131069c31d6282742ba2 192 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 26 186 2.0E-76 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 IX88_17565 6df92bcffb12131069c31d6282742ba2 192 SUPERFAMILY SSF89028 7 185 2.94E-56 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 IX88_17565 6df92bcffb12131069c31d6282742ba2 192 Pfam PF01923 Cobalamin adenosyltransferase 8 172 3.2E-54 T 11-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 IX88_02810 a1983c4fe320929453a4f71245f8f243 293 Gene3D G3DSA:1.10.10.10 4 85 2.8E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_02810 a1983c4fe320929453a4f71245f8f243 293 Pfam PF03466 LysR substrate binding domain 85 284 9.5E-29 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_02810 a1983c4fe320929453a4f71245f8f243 293 SUPERFAMILY SSF46785 3 109 3.43E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_02810 a1983c4fe320929453a4f71245f8f243 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.1E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_02810 a1983c4fe320929453a4f71245f8f243 293 Gene3D G3DSA:3.40.190.290 88 284 1.9E-29 T 11-10-2018 IX88_02810 a1983c4fe320929453a4f71245f8f243 293 SUPERFAMILY SSF53850 85 287 7.96E-33 T 11-10-2018 IX88_15150 9c74c01775958bbfcc5e1b99df107061 357 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 351 3.6E-137 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 IX88_15150 9c74c01775958bbfcc5e1b99df107061 357 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 IX88_15150 9c74c01775958bbfcc5e1b99df107061 357 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 350 1.4E-134 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 IX88_15150 9c74c01775958bbfcc5e1b99df107061 357 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 352 48.803 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 IX88_15150 9c74c01775958bbfcc5e1b99df107061 357 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 IX88_15150 9c74c01775958bbfcc5e1b99df107061 357 Gene3D G3DSA:3.20.20.210 1 357 1.4E-165 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 IX88_15150 9c74c01775958bbfcc5e1b99df107061 357 SUPERFAMILY SSF51726 1 355 1.44E-115 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 IX88_02795 c8be6a64beb744a37e2bdefd5a229c37 119 SUPERFAMILY SSF55298 7 118 9.11E-27 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 IX88_02795 c8be6a64beb744a37e2bdefd5a229c37 119 Gene3D G3DSA:3.30.1330.40 1 119 1.3E-34 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 IX88_02795 c8be6a64beb744a37e2bdefd5a229c37 119 Pfam PF01042 Endoribonuclease L-PSP 16 117 1.1E-21 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 IX88_15955 9f73db3f877c8dc60598567e82d6872f 446 SMART SM00471 59 261 1.5E-7 T 11-10-2018 IPR003607 HD/PDEase domain IX88_15955 9f73db3f877c8dc60598567e82d6872f 446 Gene3D G3DSA:1.10.3210.10 28 244 2.5E-139 T 11-10-2018 IX88_15955 9f73db3f877c8dc60598567e82d6872f 446 Gene3D G3DSA:1.10.3550.10 114 429 2.5E-139 T 11-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal IX88_15955 9f73db3f877c8dc60598567e82d6872f 446 Pfam PF01966 HD domain 63 144 9.0E-9 T 11-10-2018 IPR006674 HD domain IX88_15955 9f73db3f877c8dc60598567e82d6872f 446 Gene3D G3DSA:1.10.3410.10 245 356 2.5E-139 T 11-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 IX88_15955 9f73db3f877c8dc60598567e82d6872f 446 SUPERFAMILY SSF109604 25 385 1.65E-63 T 11-10-2018 IX88_15955 9f73db3f877c8dc60598567e82d6872f 446 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 26 438 6.0E-96 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 IX88_01870 7fd0d0405c2e20a602fc595591cd0819 259 SMART SM00346 10 99 9.7E-10 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 IX88_01870 7fd0d0405c2e20a602fc595591cd0819 259 Gene3D G3DSA:3.30.450.40 83 257 5.2E-23 T 11-10-2018 IPR029016 GAF-like domain superfamily IX88_01870 7fd0d0405c2e20a602fc595591cd0819 259 SUPERFAMILY SSF55781 74 256 5.76E-26 T 11-10-2018 IX88_01870 7fd0d0405c2e20a602fc595591cd0819 259 Gene3D G3DSA:1.10.10.10 9 82 7.2E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_01870 7fd0d0405c2e20a602fc595591cd0819 259 SUPERFAMILY SSF46785 10 81 6.0E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_01870 7fd0d0405c2e20a602fc595591cd0819 259 Pfam PF09339 IclR helix-turn-helix domain 12 61 2.4E-10 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 IX88_01870 7fd0d0405c2e20a602fc595591cd0819 259 Pfam PF01614 Bacterial transcriptional regulator 128 218 9.6E-9 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal IX88_11915 c16d52c479fabf9932d902e349ddbcfb 286 Pfam PF12146 Serine aminopeptidase, S33 34 201 1.0E-9 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 IX88_11915 c16d52c479fabf9932d902e349ddbcfb 286 PIRSF PIRSF037442 1 285 5.0E-73 T 11-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 IX88_11915 c16d52c479fabf9932d902e349ddbcfb 286 SUPERFAMILY SSF53474 4 270 3.62E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_11915 c16d52c479fabf9932d902e349ddbcfb 286 Gene3D G3DSA:3.40.50.1820 1 282 2.5E-29 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_16260 9ed44b277665cbabc13935a134343062 287 PIRSF PIRSF007580 1 280 1.4E-52 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_16260 9ed44b277665cbabc13935a134343062 287 Pfam PF10118 Predicted metal-dependent hydrolase 14 261 2.4E-59 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_16680 2528263b618075188afc9ad439d26ead 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 386 8.4E-160 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IX88_16680 2528263b618075188afc9ad439d26ead 388 Gene3D G3DSA:3.30.1490.20 21 105 1.4E-88 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 IX88_16680 2528263b618075188afc9ad439d26ead 388 SUPERFAMILY SSF52210 240 386 7.72E-53 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 IX88_16680 2528263b618075188afc9ad439d26ead 388 Pfam PF08442 ATP-grasp domain 2 203 6.7E-78 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IX88_16680 2528263b618075188afc9ad439d26ead 388 Gene3D G3DSA:3.30.470.20 1 235 1.4E-88 T 11-10-2018 IX88_16680 2528263b618075188afc9ad439d26ead 388 SUPERFAMILY SSF56059 1 239 2.75E-79 T 11-10-2018 IX88_16680 2528263b618075188afc9ad439d26ead 388 Pfam PF00549 CoA-ligase 263 383 8.3E-25 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 IX88_16680 2528263b618075188afc9ad439d26ead 388 Gene3D G3DSA:3.40.50.261 241 388 8.3E-55 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 IX88_16680 2528263b618075188afc9ad439d26ead 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 258 282 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 IX88_16680 2528263b618075188afc9ad439d26ead 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 387 42.916 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IX88_16680 2528263b618075188afc9ad439d26ead 388 PIRSF PIRSF001554 1 388 8.6E-149 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 IX88_00660 ab5ed2f3605abf2174686f55f09e3c64 436 Pfam PF04932 O-Antigen ligase 183 311 1.0E-9 T 11-10-2018 IPR007016 O-antigen ligase-related IX88_02050 4124a26f9cd40aeaa16e901840a12fd9 431 Pfam PF00860 Permease family 30 399 5.4E-97 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 IX88_02050 4124a26f9cd40aeaa16e901840a12fd9 431 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 27 423 3.4E-110 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 IX88_08450 7b833a9878e7d070ef6c243945b6cb30 142 Gene3D G3DSA:3.40.630.30 3 130 3.6E-8 T 11-10-2018 IX88_08450 7b833a9878e7d070ef6c243945b6cb30 142 SUPERFAMILY SSF55729 1 116 8.43E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_03750 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 7 22 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_03750 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 41 54 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_03750 11a14165b9f48e49cb97408b9e6b17f1 271 Pfam PF00809 Pterin binding enzyme 8 249 3.6E-71 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_03750 11a14165b9f48e49cb97408b9e6b17f1 271 SUPERFAMILY SSF51717 3 266 2.22E-72 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_03750 11a14165b9f48e49cb97408b9e6b17f1 271 Gene3D G3DSA:3.20.20.20 1 270 1.5E-75 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_03750 11a14165b9f48e49cb97408b9e6b17f1 271 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 7 263 7.8E-75 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 IX88_18210 4923535159d5abfb106c0e01dc14497f 731 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 311 721 9.4E-15 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit IX88_03525 a0ae8480753fdd8de353c49be6acdc7b 379 SUPERFAMILY SSF55874 240 355 1.77E-5 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_03525 a0ae8480753fdd8de353c49be6acdc7b 379 Pfam PF06580 Histidine kinase 187 264 1.8E-23 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 IX88_03525 a0ae8480753fdd8de353c49be6acdc7b 379 Gene3D G3DSA:3.30.565.10 240 371 5.8E-8 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IX88_16590 40db12dddac2f4c76b66d51feda8d3d0 178 Gene3D G3DSA:2.60.40.1190 25 176 1.8E-5 T 11-10-2018 IX88_01995 c3117572b19360ee89c80209d8f33b59 267 Pfam PF00248 Aldo/keto reductase family 8 251 2.1E-49 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain IX88_01995 c3117572b19360ee89c80209d8f33b59 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 IX88_01995 c3117572b19360ee89c80209d8f33b59 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 5.0E-44 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 IX88_01995 c3117572b19360ee89c80209d8f33b59 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 5.0E-44 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 IX88_01995 c3117572b19360ee89c80209d8f33b59 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 5.0E-44 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 IX88_01995 c3117572b19360ee89c80209d8f33b59 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 5.0E-44 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 IX88_01995 c3117572b19360ee89c80209d8f33b59 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 5.0E-44 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 IX88_01995 c3117572b19360ee89c80209d8f33b59 267 PIRSF PIRSF000097 102 265 3.5E-36 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 IX88_01995 c3117572b19360ee89c80209d8f33b59 267 PIRSF PIRSF000097 1 105 5.6E-34 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 IX88_01995 c3117572b19360ee89c80209d8f33b59 267 Gene3D G3DSA:3.20.20.100 1 267 4.6E-92 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily IX88_01995 c3117572b19360ee89c80209d8f33b59 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 IX88_01995 c3117572b19360ee89c80209d8f33b59 267 SUPERFAMILY SSF51430 2 262 2.62E-81 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily IX88_12085 5440b3bd063c0b83f796f98e349c0edf 250 SUPERFAMILY SSF64005 8 232 1.44E-81 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 IX88_12085 5440b3bd063c0b83f796f98e349c0edf 250 Gene3D G3DSA:3.40.1180.10 2 237 2.4E-90 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 IX88_12085 5440b3bd063c0b83f796f98e349c0edf 250 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 182 199 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 IX88_12085 5440b3bd063c0b83f796f98e349c0edf 250 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 9 237 37.002 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 IX88_12085 5440b3bd063c0b83f796f98e349c0edf 250 Pfam PF01255 Putative undecaprenyl diphosphate synthase 16 236 4.9E-76 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 IX88_12085 5440b3bd063c0b83f796f98e349c0edf 250 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 9 236 5.3E-83 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 IX88_16070 c639bad14f1c346502b8bd605125700b 338 SUPERFAMILY SSF52096 75 280 1.43E-40 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_16070 c639bad14f1c346502b8bd605125700b 338 Gene3D G3DSA:3.40.1750.20 186 252 8.5E-64 T 11-10-2018 IX88_16070 c639bad14f1c346502b8bd605125700b 338 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 81 292 8.5E-48 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 IX88_16070 c639bad14f1c346502b8bd605125700b 338 Pfam PF01343 Peptidase family S49 148 297 1.7E-37 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 IX88_16070 c639bad14f1c346502b8bd605125700b 338 Gene3D G3DSA:3.90.226.10 82 289 8.5E-64 T 11-10-2018 IX88_14195 fb03cdebb2e2e9bd17adc7c93717519b 124 SUPERFAMILY SSF47413 7 89 1.97E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IX88_14195 fb03cdebb2e2e9bd17adc7c93717519b 124 Gene3D G3DSA:1.10.260.40 2 87 3.3E-6 T 11-10-2018 IX88_17300 22110cf1588fa6d63410998d519e8d4d 149 Gene3D G3DSA:3.30.530.20 3 148 7.7E-39 T 11-10-2018 IPR023393 START-like domain superfamily IX88_17300 22110cf1588fa6d63410998d519e8d4d 149 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 142 3.1E-26 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like IX88_17300 22110cf1588fa6d63410998d519e8d4d 149 SUPERFAMILY SSF55961 3 144 4.13E-43 T 11-10-2018 IX88_16210 0af2896ae08d124f59d741486eb8fb2a 324 Gene3D G3DSA:3.30.930.10 1 324 2.9E-95 T 11-10-2018 IX88_16210 0af2896ae08d124f59d741486eb8fb2a 324 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 321 5.4E-41 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_16210 0af2896ae08d124f59d741486eb8fb2a 324 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 319 3.4E-118 T 11-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 IX88_16210 0af2896ae08d124f59d741486eb8fb2a 324 SUPERFAMILY SSF55681 10 321 7.56E-69 T 11-10-2018 IX88_16210 0af2896ae08d124f59d741486eb8fb2a 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 206 222 1.2E-12 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IX88_16210 0af2896ae08d124f59d741486eb8fb2a 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 77 90 1.2E-12 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IX88_16210 0af2896ae08d124f59d741486eb8fb2a 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 29 39 1.2E-12 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IX88_16210 0af2896ae08d124f59d741486eb8fb2a 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 95 112 1.2E-12 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 IX88_10500 ac2ef2327a4e4c8f94016998b87644c0 551 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 148 270 1.3E-8 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_10500 ac2ef2327a4e4c8f94016998b87644c0 551 Gene3D G3DSA:3.90.190.10 1 138 5.1E-40 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like IX88_10500 ac2ef2327a4e4c8f94016998b87644c0 551 Gene3D G3DSA:3.50.50.60 262 402 5.2E-94 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_10500 ac2ef2327a4e4c8f94016998b87644c0 551 Gene3D G3DSA:3.50.50.60 150 467 5.2E-94 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_10500 ac2ef2327a4e4c8f94016998b87644c0 551 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 3 134 3.5E-38 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 IX88_10500 ac2ef2327a4e4c8f94016998b87644c0 551 SUPERFAMILY SSF52799 5 98 3.46E-7 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like IX88_10500 ac2ef2327a4e4c8f94016998b87644c0 551 SUPERFAMILY SSF51905 148 472 2.22E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_10500 ac2ef2327a4e4c8f94016998b87644c0 551 Pfam PF04273 Putative phosphatase (DUF442) 3 109 9.1E-33 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 IX88_09915 3ccc571cc9f67c45b7b7e4d6dd83cf0f 380 Gene3D G3DSA:3.40.50.300 25 200 5.1E-22 T 11-10-2018 IX88_09915 3ccc571cc9f67c45b7b7e4d6dd83cf0f 380 Hamap MF_01919 Cell division protein ZapE [zapE]. 15 373 50.987 T 11-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 IX88_09915 3ccc571cc9f67c45b7b7e4d6dd83cf0f 380 Pfam PF03969 AFG1-like ATPase 16 368 3.5E-129 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 IX88_09915 3ccc571cc9f67c45b7b7e4d6dd83cf0f 380 SUPERFAMILY SSF52540 58 198 9.06E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_09895 576b42a28e2f9f7f2fed4eed6d2d4c98 232 SUPERFAMILY SSF51366 8 230 7.23E-73 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 IX88_09895 576b42a28e2f9f7f2fed4eed6d2d4c98 232 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 59 72 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 IX88_09895 576b42a28e2f9f7f2fed4eed6d2d4c98 232 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 5 232 38.079 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 IX88_09895 576b42a28e2f9f7f2fed4eed6d2d4c98 232 Gene3D G3DSA:3.20.20.70 2 232 3.0E-83 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_09895 576b42a28e2f9f7f2fed4eed6d2d4c98 232 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 8 226 2.1E-49 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 IX88_09895 576b42a28e2f9f7f2fed4eed6d2d4c98 232 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 9 227 7.7E-63 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 IX88_09895 576b42a28e2f9f7f2fed4eed6d2d4c98 232 SMART SM00934 7 227 9.2E-97 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 IX88_01225 2a14c9e2f09760f8a62c42b4dc33703c 360 Pfam PF04332 Protein of unknown function (DUF475) 53 355 1.1E-114 T 11-10-2018 IPR007427 Protein of unknown function DUF475 IX88_08625 84672db107a78291f8d21df92e3c0b57 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.5E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_08625 84672db107a78291f8d21df92e3c0b57 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.5E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_08625 84672db107a78291f8d21df92e3c0b57 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.5E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_08625 84672db107a78291f8d21df92e3c0b57 301 Pfam PF03466 LysR substrate binding domain 92 295 2.4E-41 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_08625 84672db107a78291f8d21df92e3c0b57 301 SUPERFAMILY SSF53850 92 297 2.9E-41 T 11-10-2018 IX88_08625 84672db107a78291f8d21df92e3c0b57 301 Gene3D G3DSA:1.10.10.10 1 86 3.6E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_08625 84672db107a78291f8d21df92e3c0b57 301 Gene3D G3DSA:3.40.190.290 92 295 1.3E-61 T 11-10-2018 IX88_08625 84672db107a78291f8d21df92e3c0b57 301 SUPERFAMILY SSF46785 5 86 1.02E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_08625 84672db107a78291f8d21df92e3c0b57 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 4.6E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_04800 6ec43c7293554e6829d3e5e58de9db5d 255 SMART SM00028 26 59 0.94 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IX88_04800 6ec43c7293554e6829d3e5e58de9db5d 255 SMART SM00028 60 96 54.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IX88_04800 6ec43c7293554e6829d3e5e58de9db5d 255 SMART SM00028 133 166 9.7E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IX88_04800 6ec43c7293554e6829d3e5e58de9db5d 255 SMART SM00028 97 130 280.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IX88_04800 6ec43c7293554e6829d3e5e58de9db5d 255 SUPERFAMILY SSF81901 5 194 5.75E-24 T 11-10-2018 IX88_04800 6ec43c7293554e6829d3e5e58de9db5d 255 Pfam PF13432 Tetratricopeptide repeat 31 73 0.0069 T 11-10-2018 IX88_04800 6ec43c7293554e6829d3e5e58de9db5d 255 Pfam PF13432 Tetratricopeptide repeat 78 123 5.6E-5 T 11-10-2018 IX88_04800 6ec43c7293554e6829d3e5e58de9db5d 255 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 3 235 1.1E-67 T 11-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW IX88_04800 6ec43c7293554e6829d3e5e58de9db5d 255 Pfam PF13181 Tetratricopeptide repeat 134 165 1.3E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IX88_04800 6ec43c7293554e6829d3e5e58de9db5d 255 Gene3D G3DSA:1.25.40.10 20 247 5.2E-42 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_05185 8b503ba3d59b30ba0e6f04d453aa00db 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 16.58 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 IX88_05185 8b503ba3d59b30ba0e6f04d453aa00db 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.1E-19 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 IX88_05185 8b503ba3d59b30ba0e6f04d453aa00db 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 7.1E-19 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 IX88_05185 8b503ba3d59b30ba0e6f04d453aa00db 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 7.1E-19 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 IX88_05185 8b503ba3d59b30ba0e6f04d453aa00db 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_05185 8b503ba3d59b30ba0e6f04d453aa00db 64 Pfam PF01632 Ribosomal protein L35 3 60 1.6E-22 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_05185 8b503ba3d59b30ba0e6f04d453aa00db 64 SUPERFAMILY SSF143034 3 63 2.62E-21 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_05185 8b503ba3d59b30ba0e6f04d453aa00db 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 3 63 8.6E-25 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 IX88_05185 8b503ba3d59b30ba0e6f04d453aa00db 64 Gene3D G3DSA:2.40.50.530 4 63 8.7E-22 T 11-10-2018 IX88_12015 eac392270434fd356b014010a126c63d 228 Gene3D G3DSA:3.40.50.1000 2 192 2.3E-25 T 11-10-2018 IPR023214 HAD superfamily IX88_12015 eac392270434fd356b014010a126c63d 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 181 9.3E-18 T 11-10-2018 IX88_12015 eac392270434fd356b014010a126c63d 228 SUPERFAMILY SSF56784 3 182 3.81E-32 T 11-10-2018 IPR036412 HAD-like superfamily IX88_12015 eac392270434fd356b014010a126c63d 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 5 180 3.9E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IX88_04000 f069d907abe33c846908a74c3e3a6fea 91 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 34 84 1.9E-17 T 11-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 IX88_04000 f069d907abe33c846908a74c3e3a6fea 91 PIRSF PIRSF028784 1 91 4.3E-27 T 11-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 IX88_17395 fb11684f35985d4914b94842be52a3d7 171 Gene3D G3DSA:3.30.700.10 7 125 1.1E-4 T 11-10-2018 IX88_17395 fb11684f35985d4914b94842be52a3d7 171 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 6.0E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_17395 fb11684f35985d4914b94842be52a3d7 171 SUPERFAMILY SSF54523 7 150 2.43E-13 T 11-10-2018 IX88_17395 fb11684f35985d4914b94842be52a3d7 171 Pfam PF12019 Type II transport protein GspH 50 146 4.5E-8 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 IX88_13095 cefef9510ba98c26ed7c47136238ad79 217 Pfam PF00881 Nitroreductase family 8 193 1.3E-23 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 IX88_13095 cefef9510ba98c26ed7c47136238ad79 217 Gene3D G3DSA:3.40.109.10 1 216 3.3E-58 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IX88_13095 cefef9510ba98c26ed7c47136238ad79 217 SUPERFAMILY SSF55469 1 215 6.41E-63 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IX88_09055 c6ddf6159a7fa8f5a21d522c58ecb7a1 395 Pfam PF07690 Major Facilitator Superfamily 217 391 2.5E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_09055 c6ddf6159a7fa8f5a21d522c58ecb7a1 395 Gene3D G3DSA:1.20.1250.20 2 389 2.4E-28 T 11-10-2018 IX88_09055 c6ddf6159a7fa8f5a21d522c58ecb7a1 395 SUPERFAMILY SSF103473 7 391 5.1E-30 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_06785 7e4ae503da341d31973c6f04e8bf28f4 263 SUPERFAMILY SSF51735 1 149 4.3E-20 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_06785 7e4ae503da341d31973c6f04e8bf28f4 263 Pfam PF01958 Domain of unknown function DUF108 164 251 2.7E-32 T 11-10-2018 IPR002811 Aspartate dehydrogenase GO:0006742|GO:0016491|GO:0019363|GO:0055114 KEGG: 00760+1.4.1.21 IX88_06785 7e4ae503da341d31973c6f04e8bf28f4 263 PIRSF PIRSF005227 1 263 5.9E-70 T 11-10-2018 IPR011182 L-aspartate dehydrogenase GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 IX88_06785 7e4ae503da341d31973c6f04e8bf28f4 263 SUPERFAMILY SSF55347 120 233 1.9E-30 T 11-10-2018 IX88_06785 7e4ae503da341d31973c6f04e8bf28f4 263 Hamap MF_01265 Probable L-aspartate dehydrogenase [nadX]. 1 263 33.739 T 11-10-2018 IPR020626 L-aspartate dehydrogenase, prokaryotic GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 IX88_06785 7e4ae503da341d31973c6f04e8bf28f4 263 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 8 116 1.1E-8 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 IX88_06785 7e4ae503da341d31973c6f04e8bf28f4 263 Gene3D G3DSA:3.30.360.10 120 238 3.1E-68 T 11-10-2018 IX88_06785 7e4ae503da341d31973c6f04e8bf28f4 263 Gene3D G3DSA:3.40.50.720 6 256 3.1E-68 T 11-10-2018 IX88_05445 c698ffd8d97d179254c62c6497a5546a 176 SUPERFAMILY SSF51161 20 172 1.12E-45 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily IX88_05445 c698ffd8d97d179254c62c6497a5546a 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 123 3.9E-11 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_05445 c698ffd8d97d179254c62c6497a5546a 176 Gene3D G3DSA:2.160.10.10 1 173 2.2E-63 T 11-10-2018 IX88_09060 ddbb1d0bd8754005a03b6962782f2aa8 224 Gene3D G3DSA:2.60.120.10 2 222 6.3E-72 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_09060 ddbb1d0bd8754005a03b6962782f2aa8 224 SUPERFAMILY SSF51182 128 217 6.85E-9 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_09060 ddbb1d0bd8754005a03b6962782f2aa8 224 SUPERFAMILY SSF51182 3 126 1.57E-27 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_09060 ddbb1d0bd8754005a03b6962782f2aa8 224 Pfam PF12973 ChrR Cupin-like domain 146 213 6.4E-7 T 11-10-2018 IPR025979 ChrR-like cupin domain IX88_09060 ddbb1d0bd8754005a03b6962782f2aa8 224 Pfam PF12973 ChrR Cupin-like domain 19 109 1.1E-33 T 11-10-2018 IPR025979 ChrR-like cupin domain IX88_18270 518d680cf4dce407cb9d30c4f67efad9 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_18270 518d680cf4dce407cb9d30c4f67efad9 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.9E-53 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_18270 518d680cf4dce407cb9d30c4f67efad9 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.02 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_18270 518d680cf4dce407cb9d30c4f67efad9 118 Gene3D G3DSA:1.10.8.50 1 71 4.6E-26 T 11-10-2018 IX88_18270 518d680cf4dce407cb9d30c4f67efad9 118 PIRSF PIRSF002134 1 118 1.5E-40 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_18270 518d680cf4dce407cb9d30c4f67efad9 118 Gene3D G3DSA:4.10.910.10 72 118 3.8E-27 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_18270 518d680cf4dce407cb9d30c4f67efad9 118 SUPERFAMILY SSF46946 2 114 6.15E-45 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 IX88_18270 518d680cf4dce407cb9d30c4f67efad9 118 Pfam PF00416 Ribosomal protein S13/S18 3 62 4.5E-14 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_18270 518d680cf4dce407cb9d30c4f67efad9 118 Pfam PF00416 Ribosomal protein S13/S18 65 108 9.7E-17 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00055 518d680cf4dce407cb9d30c4f67efad9 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00055 518d680cf4dce407cb9d30c4f67efad9 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.9E-53 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00055 518d680cf4dce407cb9d30c4f67efad9 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.02 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00055 518d680cf4dce407cb9d30c4f67efad9 118 Gene3D G3DSA:1.10.8.50 1 71 4.6E-26 T 11-10-2018 IX88_00055 518d680cf4dce407cb9d30c4f67efad9 118 PIRSF PIRSF002134 1 118 1.5E-40 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00055 518d680cf4dce407cb9d30c4f67efad9 118 Gene3D G3DSA:4.10.910.10 72 118 3.8E-27 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00055 518d680cf4dce407cb9d30c4f67efad9 118 SUPERFAMILY SSF46946 2 114 6.15E-45 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 IX88_00055 518d680cf4dce407cb9d30c4f67efad9 118 Pfam PF00416 Ribosomal protein S13/S18 3 62 4.5E-14 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00055 518d680cf4dce407cb9d30c4f67efad9 118 Pfam PF00416 Ribosomal protein S13/S18 65 108 9.7E-17 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_17065 456542f3cb1706300e30172d5e633ae9 186 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 180 6.5E-51 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 IX88_17065 456542f3cb1706300e30172d5e633ae9 186 Gene3D G3DSA:3.90.950.10 1 186 1.9E-66 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like IX88_17065 456542f3cb1706300e30172d5e633ae9 186 PIRSF PIRSF006305 1 186 9.2E-51 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 IX88_17065 456542f3cb1706300e30172d5e633ae9 186 SUPERFAMILY SSF52972 2 182 2.81E-60 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like IX88_17065 456542f3cb1706300e30172d5e633ae9 186 Hamap MF_00528 Septum formation protein Maf [maf]. 3 186 29.159 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 IX88_17065 456542f3cb1706300e30172d5e633ae9 186 Pfam PF02545 Maf-like protein 3 183 6.9E-56 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 IX88_00780 95c1657f8c0b606ae65ebf6bb7f51839 307 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 3 302 37.667 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 IX88_00780 95c1657f8c0b606ae65ebf6bb7f51839 307 PIRSF PIRSF004486 1 303 1.4E-104 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 IX88_00780 95c1657f8c0b606ae65ebf6bb7f51839 307 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 301 1.3E-109 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 IX88_00780 95c1657f8c0b606ae65ebf6bb7f51839 307 Gene3D G3DSA:1.10.150.170 110 209 1.4E-103 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 IX88_00780 95c1657f8c0b606ae65ebf6bb7f51839 307 Gene3D G3DSA:3.40.50.150 6 301 1.4E-103 T 11-10-2018 IX88_00780 95c1657f8c0b606ae65ebf6bb7f51839 307 Pfam PF01795 MraW methylase family 2 301 8.5E-109 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 IX88_00780 95c1657f8c0b606ae65ebf6bb7f51839 307 SUPERFAMILY SSF53335 3 302 4.62E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_00780 95c1657f8c0b606ae65ebf6bb7f51839 307 SUPERFAMILY SSF81799 111 207 2.62E-35 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 IX88_10170 685c0481654d473ae5be2069f5bef0a7 204 Gene3D G3DSA:3.50.30.100 1 188 7.3E-39 T 11-10-2018 IX88_10170 685c0481654d473ae5be2069f5bef0a7 204 SUPERFAMILY SSF89562 15 177 4.45E-33 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily IX88_10170 685c0481654d473ae5be2069f5bef0a7 204 Pfam PF03737 Aldolase/RraA 28 165 1.6E-26 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein IX88_02280 e4b58b78169396a21ff90a02afdc7209 318 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 313 7.7E-118 T 11-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 IX88_02280 e4b58b78169396a21ff90a02afdc7209 318 Pfam PF03741 Integral membrane protein TerC family 80 282 6.2E-52 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 IX88_16710 68e3b34192c08cafe5e519cf4e562013 121 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 9 119 2.5E-34 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 IX88_16710 68e3b34192c08cafe5e519cf4e562013 121 PIRSF PIRSF000169 1 121 1.6E-40 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 IX88_16710 68e3b34192c08cafe5e519cf4e562013 121 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 12 109 6.5E-7 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_16710 68e3b34192c08cafe5e519cf4e562013 121 Gene3D G3DSA:1.20.1300.10 1 120 3.8E-30 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_16710 68e3b34192c08cafe5e519cf4e562013 121 SUPERFAMILY SSF81343 4 119 2.62E-26 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 IX88_00495 022d56c7e8d624a774c1b8992b1ad818 409 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 86 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_00495 022d56c7e8d624a774c1b8992b1ad818 409 SUPERFAMILY SSF103473 9 399 4.58E-56 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_00495 022d56c7e8d624a774c1b8992b1ad818 409 Gene3D G3DSA:1.20.1720.10 17 391 4.1E-64 T 11-10-2018 IX88_00495 022d56c7e8d624a774c1b8992b1ad818 409 Pfam PF07690 Major Facilitator Superfamily 23 353 1.0E-39 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_13130 2b08b446ec20d87d6b594b521ac615b3 102 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 2 91 1.5E-17 T 11-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ IX88_13130 2b08b446ec20d87d6b594b521ac615b3 102 Pfam PF04221 RelB antitoxin 5 71 4.6E-13 T 11-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ IX88_13130 2b08b446ec20d87d6b594b521ac615b3 102 Gene3D G3DSA:1.10.1220.10 2 51 2.4E-14 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 IX88_11335 67ae7ea56e64f022c708b155ee5e4730 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.7E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_11335 67ae7ea56e64f022c708b155ee5e4730 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.7E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_11335 67ae7ea56e64f022c708b155ee5e4730 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.7E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_11335 67ae7ea56e64f022c708b155ee5e4730 138 Gene3D G3DSA:1.10.1660.10 1 136 5.5E-29 T 11-10-2018 IX88_11335 67ae7ea56e64f022c708b155ee5e4730 138 SMART SM00422 1 70 4.8E-28 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_11335 67ae7ea56e64f022c708b155ee5e4730 138 Pfam PF13411 MerR HTH family regulatory protein 1 69 1.2E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_11335 67ae7ea56e64f022c708b155ee5e4730 138 SUPERFAMILY SSF46955 1 112 1.28E-27 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily IX88_07520 64085292064006297e9baf63dc987199 141 Pfam PF03203 MerC mercury resistance protein 10 121 8.3E-19 T 11-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 IX88_07520 64085292064006297e9baf63dc987199 141 ProDom PD007347 MERC PLASMID MEMBRANE INNER UPTAKE MERCURY HGII RESISTANCE PRECURSOR TRANSMEMBRANE 21 141 1.0E-55 T 11-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 IX88_07820 61375befb42081e1525caefa9b77f3a6 226 SMART SM00895 75 213 4.3E-18 T 11-10-2018 IPR011711 GntR, C-terminal IX88_07820 61375befb42081e1525caefa9b77f3a6 226 Pfam PF07729 FCD domain 75 210 7.5E-12 T 11-10-2018 IPR011711 GntR, C-terminal IX88_07820 61375befb42081e1525caefa9b77f3a6 226 SMART SM00345 7 65 4.6E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_07820 61375befb42081e1525caefa9b77f3a6 226 SUPERFAMILY SSF46785 4 69 7.32E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_07820 61375befb42081e1525caefa9b77f3a6 226 Gene3D G3DSA:1.20.120.530 73 215 3.0E-18 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_07820 61375befb42081e1525caefa9b77f3a6 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 65 5.6E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_07820 61375befb42081e1525caefa9b77f3a6 226 SUPERFAMILY SSF48008 73 211 8.89E-15 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal IX88_07820 61375befb42081e1525caefa9b77f3a6 226 Gene3D G3DSA:1.10.10.10 1 66 4.7E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_02530 f429e7aab9b18312a2ebc6e01958cce5 238 SUPERFAMILY SSF55666 154 236 5.76E-24 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IX88_02530 f429e7aab9b18312a2ebc6e01958cce5 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.024 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 IX88_02530 f429e7aab9b18312a2ebc6e01958cce5 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site IX88_02530 f429e7aab9b18312a2ebc6e01958cce5 238 Gene3D G3DSA:3.30.230.70 10 237 1.5E-63 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IX88_02530 f429e7aab9b18312a2ebc6e01958cce5 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 4.0E-115 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 IX88_02530 f429e7aab9b18312a2ebc6e01958cce5 238 SUPERFAMILY SSF54211 1 181 7.09E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_02530 f429e7aab9b18312a2ebc6e01958cce5 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 224 1.3E-9 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IX88_02530 f429e7aab9b18312a2ebc6e01958cce5 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.3E-23 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 IX88_15690 591865b16140b3f561f8eded53e09bee 377 Pfam PF01472 PUA domain 286 360 2.7E-20 T 11-10-2018 IPR002478 PUA domain GO:0003723 IX88_15690 591865b16140b3f561f8eded53e09bee 377 TIGRFAM TIGR01027 proB: glutamate 5-kinase 15 375 2.2E-128 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 IX88_15690 591865b16140b3f561f8eded53e09bee 377 Gene3D G3DSA:2.30.130.10 275 377 1.2E-30 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 IX88_15690 591865b16140b3f561f8eded53e09bee 377 SUPERFAMILY SSF88697 286 376 3.31E-20 T 11-10-2018 IPR015947 PUA-like superfamily IX88_15690 591865b16140b3f561f8eded53e09bee 377 PIRSF PIRSF000729 10 377 3.1E-130 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 IX88_15690 591865b16140b3f561f8eded53e09bee 377 Hamap MF_00456 Glutamate 5-kinase [proB]. 15 268 35.765 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 IX88_15690 591865b16140b3f561f8eded53e09bee 377 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 IX88_15690 591865b16140b3f561f8eded53e09bee 377 Gene3D G3DSA:3.40.1160.10 5 274 7.0E-94 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily IX88_15690 591865b16140b3f561f8eded53e09bee 377 SMART SM00359 286 369 1.2E-12 T 11-10-2018 IPR002478 PUA domain GO:0003723 IX88_15690 591865b16140b3f561f8eded53e09bee 377 Pfam PF00696 Amino acid kinase family 15 244 4.4E-46 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 IX88_15690 591865b16140b3f561f8eded53e09bee 377 SUPERFAMILY SSF53633 15 265 7.2E-74 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily IX88_15690 591865b16140b3f561f8eded53e09bee 377 PRINTS PR00474 Glutamate 5-kinase family signature 86 114 3.2E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 IX88_15690 591865b16140b3f561f8eded53e09bee 377 PRINTS PR00474 Glutamate 5-kinase family signature 158 185 3.2E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 IX88_15690 591865b16140b3f561f8eded53e09bee 377 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 3.2E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 IX88_15690 591865b16140b3f561f8eded53e09bee 377 PRINTS PR00474 Glutamate 5-kinase family signature 126 147 3.2E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 IX88_15690 591865b16140b3f561f8eded53e09bee 377 PRINTS PR00474 Glutamate 5-kinase family signature 52 66 3.2E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 IX88_17940 3bfd4900fe253994c29a57aaba17db0e 142 PIRSF PIRSF002181 1 142 1.4E-50 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 IX88_17940 3bfd4900fe253994c29a57aaba17db0e 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.566 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 IX88_17940 3bfd4900fe253994c29a57aaba17db0e 142 Gene3D G3DSA:3.90.1180.10 1 142 3.1E-62 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 IX88_17940 3bfd4900fe253994c29a57aaba17db0e 142 Pfam PF00572 Ribosomal protein L13 15 138 1.4E-56 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 IX88_17940 3bfd4900fe253994c29a57aaba17db0e 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 142 4.9E-63 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_17940 3bfd4900fe253994c29a57aaba17db0e 142 SUPERFAMILY SSF52161 1 140 2.35E-58 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 IX88_02410 110356f98ec085a5a8fac01ba2f67676 160 SUPERFAMILY SSF54534 13 149 9.62E-35 T 11-10-2018 IX88_02410 110356f98ec085a5a8fac01ba2f67676 160 Gene3D G3DSA:3.10.50.40 11 160 3.2E-37 T 11-10-2018 IX88_02410 110356f98ec085a5a8fac01ba2f67676 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 12 146 3.4E-18 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain IX88_11680 dd071380ca9c2a9215a86b5ab6d4ef3d 364 SUPERFAMILY SSF53474 55 358 4.52E-27 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_11680 dd071380ca9c2a9215a86b5ab6d4ef3d 364 Gene3D G3DSA:3.40.50.1820 87 356 2.7E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_11680 dd071380ca9c2a9215a86b5ab6d4ef3d 364 Pfam PF12146 Serine aminopeptidase, S33 106 340 2.0E-7 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 IX88_11680 dd071380ca9c2a9215a86b5ab6d4ef3d 364 PIRSF PIRSF005211 2 364 8.7E-59 T 11-10-2018 IPR012020 AB hydrolase 4 family IX88_01895 83111685b1c3230938dcdbc69cf0bb9f 214 Gene3D G3DSA:3.40.50.850 5 214 7.4E-83 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 IX88_01895 83111685b1c3230938dcdbc69cf0bb9f 214 SUPERFAMILY SSF52499 6 213 9.94E-53 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 IX88_01895 83111685b1c3230938dcdbc69cf0bb9f 214 Pfam PF00857 Isochorismatase family 10 207 3.8E-34 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 IX88_09645 90d6ef8134725892cedd2b5423c447ec 157 Pfam PF04229 GrpB protein 8 155 4.6E-22 T 11-10-2018 IPR007344 GrpB/Dephospho-CoA kinase IX88_09645 90d6ef8134725892cedd2b5423c447ec 157 Gene3D G3DSA:3.30.460.10 5 157 1.3E-19 T 11-10-2018 IX88_09645 90d6ef8134725892cedd2b5423c447ec 157 SUPERFAMILY SSF81301 8 155 1.96E-32 T 11-10-2018 IX88_09660 c3853e7e5657abcf51af33930ceb98a2 162 Gene3D G3DSA:3.30.70.920 62 145 2.1E-19 T 11-10-2018 IX88_09660 c3853e7e5657abcf51af33930ceb98a2 162 SUPERFAMILY SSF54909 70 153 2.55E-19 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel IX88_09660 c3853e7e5657abcf51af33930ceb98a2 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 2.8E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_09660 c3853e7e5657abcf51af33930ceb98a2 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 2.8E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_09660 c3853e7e5657abcf51af33930ceb98a2 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 2.8E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_09660 c3853e7e5657abcf51af33930ceb98a2 162 Gene3D G3DSA:1.10.10.10 2 61 2.2E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_09660 c3853e7e5657abcf51af33930ceb98a2 162 SMART SM00344 8 117 1.4E-40 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 IX88_09660 c3853e7e5657abcf51af33930ceb98a2 162 Pfam PF13404 AsnC-type helix-turn-helix domain 8 48 3.8E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_09660 c3853e7e5657abcf51af33930ceb98a2 162 SUPERFAMILY SSF46785 7 66 7.92E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_09660 c3853e7e5657abcf51af33930ceb98a2 162 Pfam PF01037 Lrp/AsnC ligand binding domain 74 147 5.1E-18 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IX88_11305 5a0cb6f9ce625e7cc4851e3b4182ec9f 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 79 4.8E-14 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain IX88_11305 5a0cb6f9ce625e7cc4851e3b4182ec9f 98 SUPERFAMILY SSF54909 4 89 9.91E-23 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel IX88_11305 5a0cb6f9ce625e7cc4851e3b4182ec9f 98 Gene3D G3DSA:3.30.70.100 1 95 7.1E-26 T 11-10-2018 IX88_08455 c9d9fedb1f8c2a182fa1310b3960ba07 415 SUPERFAMILY SSF56601 136 392 6.5E-25 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like IX88_08455 c9d9fedb1f8c2a182fa1310b3960ba07 415 Pfam PF13354 Beta-lactamase enzyme family 159 343 1.0E-17 T 11-10-2018 IX88_08455 c9d9fedb1f8c2a182fa1310b3960ba07 415 Gene3D G3DSA:3.40.710.10 158 385 1.3E-46 T 11-10-2018 IX88_08455 c9d9fedb1f8c2a182fa1310b3960ba07 415 Gene3D G3DSA:1.10.8.620 266 319 1.3E-46 T 11-10-2018 IX88_14735 1dbe8ff7ccfd5578f122a65c3e72e110 435 SUPERFAMILY SSF53474 76 391 7.97E-26 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_14735 1dbe8ff7ccfd5578f122a65c3e72e110 435 Gene3D G3DSA:3.40.50.1820 318 427 1.2E-9 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_14735 1dbe8ff7ccfd5578f122a65c3e72e110 435 Pfam PF03583 Secretory lipase 120 218 1.4E-5 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 IX88_14735 1dbe8ff7ccfd5578f122a65c3e72e110 435 Gene3D G3DSA:3.40.50.1820 27 278 1.7E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_14735 1dbe8ff7ccfd5578f122a65c3e72e110 435 PIRSF PIRSF029171 28 415 3.0E-73 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 IX88_06275 0bf3ed2e4b2b590bc8a19092c03f0121 541 Pfam PF02540 NAD synthase 265 513 2.4E-71 T 11-10-2018 IPR022310 NAD/GMP synthase IX88_06275 0bf3ed2e4b2b590bc8a19092c03f0121 541 Gene3D G3DSA:3.40.50.620 261 540 8.7E-111 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_06275 0bf3ed2e4b2b590bc8a19092c03f0121 541 SUPERFAMILY SSF56317 1 244 3.92E-60 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily IX88_06275 0bf3ed2e4b2b590bc8a19092c03f0121 541 SUPERFAMILY SSF52402 257 523 1.68E-76 T 11-10-2018 IX88_06275 0bf3ed2e4b2b590bc8a19092c03f0121 541 Gene3D G3DSA:3.60.110.10 1 260 1.0E-110 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily IX88_06275 0bf3ed2e4b2b590bc8a19092c03f0121 541 TIGRFAM TIGR00552 nadE: NAD+ synthetase 270 513 1.8E-58 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 IX88_06275 0bf3ed2e4b2b590bc8a19092c03f0121 541 Pfam PF00795 Carbon-nitrogen hydrolase 5 244 1.0E-30 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 IX88_06275 0bf3ed2e4b2b590bc8a19092c03f0121 541 PIRSF PIRSF006630 1 541 1.3E-206 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 IX88_06275 0bf3ed2e4b2b590bc8a19092c03f0121 541 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 4 539 28.264 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 IX88_05965 0750c0deeb101fa968e13b8dfbf29007 250 Pfam PF03099 Biotin/lipoate A/B protein ligase family 39 141 3.2E-9 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 IX88_05965 0750c0deeb101fa968e13b8dfbf29007 250 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 25 242 6.6E-39 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 IX88_05965 0750c0deeb101fa968e13b8dfbf29007 250 Gene3D G3DSA:3.30.930.10 1 200 4.1E-37 T 11-10-2018 IX88_05965 0750c0deeb101fa968e13b8dfbf29007 250 SUPERFAMILY SSF55681 13 188 2.65E-34 T 11-10-2018 IX88_13025 7a3f30d631b3f8915cbd368886b47313 119 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 97 2.6E-7 T 11-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 IX88_13025 7a3f30d631b3f8915cbd368886b47313 119 Gene3D G3DSA:3.30.429.10 1 119 7.3E-36 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily IX88_13025 7a3f30d631b3f8915cbd368886b47313 119 SUPERFAMILY SSF55331 2 118 3.33E-27 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily IX88_03460 a79050cd4a8da76912ebfbc7b78bbee9 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 344 368 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_03460 a79050cd4a8da76912ebfbc7b78bbee9 398 Pfam PF01098 Cell cycle protein 33 386 3.1E-100 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_03460 a79050cd4a8da76912ebfbc7b78bbee9 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 31 384 1.1E-122 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_03460 a79050cd4a8da76912ebfbc7b78bbee9 398 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 28 396 38.052 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_02780 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 4.2E-18 T 11-10-2018 IX88_02780 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 SUPERFAMILY SSF54909 66 151 6.97E-18 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel IX88_02780 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 Gene3D G3DSA:1.10.10.10 1 55 2.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_02780 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site IX88_02780 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 3.5E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_02780 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 3.5E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_02780 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 3.5E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 IX88_02780 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 SMART SM00344 4 113 3.1E-43 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 IX88_02780 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 Gene3D G3DSA:3.30.70.920 56 149 1.5E-20 T 11-10-2018 IX88_02780 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 SUPERFAMILY SSF46785 4 61 7.32E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_02780 cf66d9fd96c9f59a4d4e6c8e704c23a1 155 Pfam PF01037 Lrp/AsnC ligand binding domain 71 144 2.7E-19 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 TIGRFAM TIGR02053 MerA: mercury(II) reductase 100 561 1.7E-189 T 11-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 SUPERFAMILY SSF51905 98 427 2.43E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 Gene3D G3DSA:3.30.390.30 436 561 5.1E-47 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 Gene3D G3DSA:3.50.50.60 102 419 3.2E-122 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 SUPERFAMILY SSF55424 436 559 3.26E-33 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 PIRSF PIRSF000350 1 561 2.7E-266 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 PRINTS PR00945 Mercuric reductase class II signature 237 254 2.8E-93 T 11-10-2018 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 PRINTS PR00945 Mercuric reductase class II signature 534 553 2.8E-93 T 11-10-2018 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 PRINTS PR00945 Mercuric reductase class II signature 292 307 2.8E-93 T 11-10-2018 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 PRINTS PR00945 Mercuric reductase class II signature 110 128 2.8E-93 T 11-10-2018 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 PRINTS PR00945 Mercuric reductase class II signature 13 23 2.8E-93 T 11-10-2018 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 PRINTS PR00945 Mercuric reductase class II signature 272 289 2.8E-93 T 11-10-2018 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 PRINTS PR00945 Mercuric reductase class II signature 145 164 2.8E-93 T 11-10-2018 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 PRINTS PR00945 Mercuric reductase class II signature 469 489 2.8E-93 T 11-10-2018 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 Gene3D G3DSA:3.30.70.100 1 69 4.4E-20 T 11-10-2018 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 437 545 2.1E-29 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 133 143 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 SUPERFAMILY SSF55008 2 70 2.62E-17 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 Pfam PF00403 Heavy-metal-associated domain 3 43 8.1E-10 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 100 418 3.1E-65 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_07525 3d1ec8aa7f24cf24dfc4d69ca98a0435 561 Gene3D G3DSA:3.50.50.60 245 361 3.2E-122 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_11330 5c3e930e864cacadeb1a359ecdd0293b 230 Gene3D G3DSA:3.40.50.880 2 228 7.3E-69 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_11330 5c3e930e864cacadeb1a359ecdd0293b 230 Pfam PF01965 DJ-1/PfpI family 28 226 1.2E-15 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 IX88_11330 5c3e930e864cacadeb1a359ecdd0293b 230 SUPERFAMILY SSF52317 1 227 2.84E-70 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_14075 3299e95114fd1687ea7eb5449ff8630f 153 Pfam PF03592 Terminase small subunit 14 89 3.9E-7 T 11-10-2018 IPR005335 Terminase small subunit GO:0006323 IX88_14585 768e000645ebba8c8d0f11ff5b2db9a5 105 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 3 99 2.4E-20 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD IX88_06660 e8320fc9f45456c58e2f270ed79825b7 688 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 64 511 5.7E-171 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 IX88_06660 e8320fc9f45456c58e2f270ed79825b7 688 ProSitePatterns PS01303 BCCT family of transporters signature. 327 336 - T 11-10-2018 IPR018093 BCCT transporter, conserved site IX88_06660 e8320fc9f45456c58e2f270ed79825b7 688 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 26 511 8.3E-177 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 IX88_09810 4d1746309570bda7ccc8022818ed989b 326 Gene3D G3DSA:3.40.50.300 7 171 3.4E-45 T 11-10-2018 IX88_09810 4d1746309570bda7ccc8022818ed989b 326 SUPERFAMILY SSF52540 10 211 2.16E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_09810 4d1746309570bda7ccc8022818ed989b 326 Pfam PF13177 DNA polymerase III, delta subunit 27 173 3.4E-36 T 11-10-2018 IX88_06095 3a4ec99ed33d8906fadf7c7c5351cef0 255 Gene3D G3DSA:3.40.1190.20 1 237 4.3E-77 T 11-10-2018 IPR029056 Ribokinase-like IX88_06095 3a4ec99ed33d8906fadf7c7c5351cef0 255 Pfam PF08543 Phosphomethylpyrimidine kinase 12 241 1.2E-66 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 IX88_06095 3a4ec99ed33d8906fadf7c7c5351cef0 255 SUPERFAMILY SSF53613 2 240 9.49E-59 T 11-10-2018 IPR029056 Ribokinase-like IX88_11540 47eb2aeaf7b964faeb2173b41b87640d 413 Gene3D G3DSA:1.20.140.10 252 406 3.1E-34 T 11-10-2018 IX88_11540 47eb2aeaf7b964faeb2173b41b87640d 413 SUPERFAMILY SSF56645 5 264 1.01E-63 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_11540 47eb2aeaf7b964faeb2173b41b87640d 413 Gene3D G3DSA:1.10.540.10 1 135 9.1E-52 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_11540 47eb2aeaf7b964faeb2173b41b87640d 413 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 132 3.4E-16 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_11540 47eb2aeaf7b964faeb2173b41b87640d 413 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 138 239 2.8E-18 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_11540 47eb2aeaf7b964faeb2173b41b87640d 413 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 251 399 3.5E-31 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_11540 47eb2aeaf7b964faeb2173b41b87640d 413 Gene3D G3DSA:2.40.110.10 136 251 8.0E-42 T 11-10-2018 IX88_11540 47eb2aeaf7b964faeb2173b41b87640d 413 SUPERFAMILY SSF47203 250 404 5.96E-39 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_02740 a87490e36f6ed0350ebf3226fbaa7ea5 157 Pfam PF16133 Domain of unknown function (DUF4844) 34 145 1.5E-20 T 11-10-2018 IPR032301 Protein of unknown function DUF4844 IX88_02740 a87490e36f6ed0350ebf3226fbaa7ea5 157 Gene3D G3DSA:1.20.1480.40 19 157 6.7E-65 T 11-10-2018 IX88_15420 d15fd211c422a6dca8cdcdf8df9d1962 300 ProSitePatterns PS00211 ABC transporters family signature. 197 211 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_15420 d15fd211c422a6dca8cdcdf8df9d1962 300 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 53 300 9.8E-123 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 IX88_15420 d15fd211c422a6dca8cdcdf8df9d1962 300 Gene3D G3DSA:3.40.50.300 52 298 1.4E-62 T 11-10-2018 IX88_15420 d15fd211c422a6dca8cdcdf8df9d1962 300 Pfam PF00005 ABC transporter 69 224 7.2E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_15420 d15fd211c422a6dca8cdcdf8df9d1962 300 SUPERFAMILY SSF52540 52 288 2.87E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_15420 d15fd211c422a6dca8cdcdf8df9d1962 300 SMART SM00382 77 272 8.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_03055 64716e9b4e7e5c1ee5fcf180e550f0f2 178 SUPERFAMILY SSF47928 3 106 2.09E-25 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03055 64716e9b4e7e5c1ee5fcf180e550f0f2 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 1.9E-53 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03055 64716e9b4e7e5c1ee5fcf180e550f0f2 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 176 2.8E-43 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03055 64716e9b4e7e5c1ee5fcf180e550f0f2 178 Gene3D G3DSA:1.10.520.20 2 107 3.2E-30 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03055 64716e9b4e7e5c1ee5fcf180e550f0f2 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 2.1E-24 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03055 64716e9b4e7e5c1ee5fcf180e550f0f2 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 2.1E-24 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03055 64716e9b4e7e5c1ee5fcf180e550f0f2 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 2.1E-24 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03055 64716e9b4e7e5c1ee5fcf180e550f0f2 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 2.1E-24 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03055 64716e9b4e7e5c1ee5fcf180e550f0f2 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 2.1E-24 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03055 64716e9b4e7e5c1ee5fcf180e550f0f2 178 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 11-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_03055 64716e9b4e7e5c1ee5fcf180e550f0f2 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 19.016 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 IX88_08515 5bfa2753bb2ce004eb50f8b1658aca09 527 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 1 192 2.5E-57 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D IX88_08515 5bfa2753bb2ce004eb50f8b1658aca09 527 Gene3D G3DSA:3.30.1360.40 4 72 9.7E-12 T 11-10-2018 IX88_08515 5bfa2753bb2ce004eb50f8b1658aca09 527 SMART SM00796 1 192 5.2E-72 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D IX88_08515 5bfa2753bb2ce004eb50f8b1658aca09 527 SUPERFAMILY SSF50891 406 519 4.55E-16 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily IX88_08515 5bfa2753bb2ce004eb50f8b1658aca09 527 SUPERFAMILY SSF160467 2 84 3.27E-8 T 11-10-2018 IX88_08515 5bfa2753bb2ce004eb50f8b1658aca09 527 Gene3D G3DSA:2.40.100.10 74 204 2.0E-47 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily IX88_08515 5bfa2753bb2ce004eb50f8b1658aca09 527 Gene3D G3DSA:2.40.100.10 404 523 9.3E-39 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily IX88_08515 5bfa2753bb2ce004eb50f8b1658aca09 527 SUPERFAMILY SSF50891 81 205 1.78E-35 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily IX88_08515 5bfa2753bb2ce004eb50f8b1658aca09 527 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 230 518 9.2E-72 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B IX88_08515 5bfa2753bb2ce004eb50f8b1658aca09 527 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 251 516 6.7E-72 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B IX88_08515 5bfa2753bb2ce004eb50f8b1658aca09 527 SMART SM00797 250 527 7.5E-89 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B IX88_03265 ab7afceb9cd777ac97a3a48a03993684 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_03265 ab7afceb9cd777ac97a3a48a03993684 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 305 320 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_03265 ab7afceb9cd777ac97a3a48a03993684 439 Pfam PF00083 Sugar (and other) transporter 51 437 2.7E-47 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 IX88_03265 ab7afceb9cd777ac97a3a48a03993684 439 SUPERFAMILY SSF103473 9 436 3.27E-91 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_03265 ab7afceb9cd777ac97a3a48a03993684 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 89 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_03265 ab7afceb9cd777ac97a3a48a03993684 439 Gene3D G3DSA:1.20.1250.20 12 438 4.4E-92 T 11-10-2018 IX88_06250 4a04445b57d8940ac2ea9013ea67920b 371 Gene3D G3DSA:3.90.380.10 23 214 1.5E-48 T 11-10-2018 IX88_06250 4a04445b57d8940ac2ea9013ea67920b 371 Gene3D G3DSA:3.90.380.10 244 368 8.9E-7 T 11-10-2018 IX88_06250 4a04445b57d8940ac2ea9013ea67920b 371 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 181 370 1.5E-20 T 11-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 IX88_06250 4a04445b57d8940ac2ea9013ea67920b 371 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 86 109 - T 11-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 IX88_06250 4a04445b57d8940ac2ea9013ea67920b 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 7.7E-24 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_06250 4a04445b57d8940ac2ea9013ea67920b 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 180 202 7.7E-24 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_06250 4a04445b57d8940ac2ea9013ea67920b 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 100 120 7.7E-24 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_06250 4a04445b57d8940ac2ea9013ea67920b 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 141 167 7.7E-24 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_06250 4a04445b57d8940ac2ea9013ea67920b 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 7.7E-24 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_06250 4a04445b57d8940ac2ea9013ea67920b 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 28 53 7.7E-24 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 IX88_06250 4a04445b57d8940ac2ea9013ea67920b 371 SUPERFAMILY SSF55961 161 369 7.38E-34 T 11-10-2018 IX88_06250 4a04445b57d8940ac2ea9013ea67920b 371 Gene3D G3DSA:2.102.10.10 43 165 1.5E-48 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_06250 4a04445b57d8940ac2ea9013ea67920b 371 SUPERFAMILY SSF50022 18 156 4.19E-44 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_06250 4a04445b57d8940ac2ea9013ea67920b 371 Hamap MF_02097 Carnitine monooxygenase oxygenase subunit. 1 371 74.412 T 11-10-2018 IPR039004 Carnitine monooxygenase oxygenase subunit GO:0009437|GO:0051537 IX88_06250 4a04445b57d8940ac2ea9013ea67920b 371 Pfam PF00355 Rieske [2Fe-2S] domain 43 131 6.5E-19 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 IX88_04740 ca77ceca549419a1d045cecb05f42b31 170 SUPERFAMILY SSF52540 2 161 7.03E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04740 ca77ceca549419a1d045cecb05f42b31 170 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 4 159 1.7E-56 T 11-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 IX88_04740 ca77ceca549419a1d045cecb05f42b31 170 Gene3D G3DSA:3.40.50.300 1 163 1.1E-62 T 11-10-2018 IX88_04740 ca77ceca549419a1d045cecb05f42b31 170 Pfam PF01202 Shikimate kinase 10 161 2.0E-15 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 IX88_14530 52ea21df380c46c558afca9a763d9ce3 228 SUPERFAMILY SSF53098 3 200 1.33E-20 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_14530 52ea21df380c46c558afca9a763d9ce3 228 Gene3D G3DSA:3.30.420.10 3 184 8.4E-20 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IX88_14530 52ea21df380c46c558afca9a763d9ce3 228 SMART SM00479 2 170 0.0014 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III IX88_14530 52ea21df380c46c558afca9a763d9ce3 228 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 186 213 2.0E-5 T 11-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor IX88_14675 644b8f2e0e12e33d1116daedc23f73da 240 Gene3D G3DSA:2.40.240.20 1 66 4.0E-20 T 11-10-2018 IX88_14675 644b8f2e0e12e33d1116daedc23f73da 240 SUPERFAMILY SSF75217 72 236 2.66E-47 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases IX88_14675 644b8f2e0e12e33d1116daedc23f73da 240 Gene3D G3DSA:3.40.1280.10 72 240 2.3E-51 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IX88_14675 644b8f2e0e12e33d1116daedc23f73da 240 Pfam PF04452 RNA methyltransferase 17 235 1.4E-69 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 IX88_14675 644b8f2e0e12e33d1116daedc23f73da 240 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 4 237 7.3E-59 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 IX88_14675 644b8f2e0e12e33d1116daedc23f73da 240 PIRSF PIRSF015601 1 240 4.1E-61 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 IX88_14675 644b8f2e0e12e33d1116daedc23f73da 240 SUPERFAMILY SSF88697 1 69 6.71E-18 T 11-10-2018 IPR015947 PUA-like superfamily IX88_05270 c9329b6d01babbcb7c69f31dfb3cab78 934 Pfam PF10101 Predicted membrane protein (DUF2339) 187 921 3.8E-96 T 11-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane IX88_02370 d241950ba9edaaca82a640f26411b672 185 Gene3D G3DSA:2.40.100.10 19 182 5.8E-63 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily IX88_02370 d241950ba9edaaca82a640f26411b672 185 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 62 74 2.7E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 IX88_02370 d241950ba9edaaca82a640f26411b672 185 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 2.7E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 IX88_02370 d241950ba9edaaca82a640f26411b672 185 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 51 2.7E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 IX88_02370 d241950ba9edaaca82a640f26411b672 185 PIRSF PIRSF001467 10 183 3.3E-29 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 IX88_02370 d241950ba9edaaca82a640f26411b672 185 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 23 179 1.1E-48 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 IX88_02370 d241950ba9edaaca82a640f26411b672 185 SUPERFAMILY SSF50891 18 180 9.2E-60 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily IX88_02370 d241950ba9edaaca82a640f26411b672 185 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 57 74 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 IX88_06955 3b65e3731c2aeaa3559a017300b3aaa1 269 Gene3D G3DSA:1.20.1540.10 11 221 5.1E-35 T 11-10-2018 IPR035952 Rhomboid-like superfamily IX88_06955 3b65e3731c2aeaa3559a017300b3aaa1 269 Pfam PF01694 Rhomboid family 63 217 5.9E-35 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 IX88_06955 3b65e3731c2aeaa3559a017300b3aaa1 269 SUPERFAMILY SSF144091 17 221 9.29E-37 T 11-10-2018 IX88_04685 fe5be350711601f9b290c7d0963e41da 201 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 199 9.3E-106 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 IX88_04685 fe5be350711601f9b290c7d0963e41da 201 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 11-10-2018 IPR033135 ClpP, histidine active site IX88_04685 fe5be350711601f9b290c7d0963e41da 201 Pfam PF00574 Clp protease 20 199 1.8E-88 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA IX88_04685 fe5be350711601f9b290c7d0963e41da 201 SUPERFAMILY SSF52096 18 199 2.64E-75 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_04685 fe5be350711601f9b290c7d0963e41da 201 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 6.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 IX88_04685 fe5be350711601f9b290c7d0963e41da 201 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 6.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 IX88_04685 fe5be350711601f9b290c7d0963e41da 201 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 6.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 IX88_04685 fe5be350711601f9b290c7d0963e41da 201 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 6.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 IX88_04685 fe5be350711601f9b290c7d0963e41da 201 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 6.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 IX88_04685 fe5be350711601f9b290c7d0963e41da 201 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 10 200 43.953 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 IX88_04685 fe5be350711601f9b290c7d0963e41da 201 Gene3D G3DSA:3.90.226.10 3 201 7.2E-83 T 11-10-2018 IX88_04685 fe5be350711601f9b290c7d0963e41da 201 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 97 108 - T 11-10-2018 IPR018215 ClpP, Ser active site IX88_08780 2c7f0958c4d4f57083bf66fe2900bfad 267 Pfam PF13622 Thioesterase-like superfamily 30 260 1.7E-24 T 11-10-2018 IX88_08780 2c7f0958c4d4f57083bf66fe2900bfad 267 Gene3D G3DSA:3.10.129.90 17 253 2.5E-10 T 11-10-2018 IX88_08780 2c7f0958c4d4f57083bf66fe2900bfad 267 SUPERFAMILY SSF54637 159 251 4.66E-6 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_00595 db1e94f026d4d1c9a61bea1eed8d940f 1284 Gene3D G3DSA:3.40.50.410 48 173 2.7E-10 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily IX88_00595 db1e94f026d4d1c9a61bea1eed8d940f 1284 SUPERFAMILY SSF53300 49 162 1.61E-8 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily IX88_00595 db1e94f026d4d1c9a61bea1eed8d940f 1284 Pfam PF13519 von Willebrand factor type A domain 51 160 3.8E-8 T 11-10-2018 IPR002035 von Willebrand factor, type A IX88_00595 db1e94f026d4d1c9a61bea1eed8d940f 1284 Pfam PF05567 Neisseria PilC beta-propeller domain 715 964 1.7E-14 T 11-10-2018 IPR008707 PilC beta-propeller domain IX88_04015 d743e61e95cdc57218fb8da39608624d 122 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 10 107 2.4E-25 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like IX88_02010 863a76325f4fbd138a37d6028316c706 273 Gene3D G3DSA:3.30.360.10 129 236 9.6E-103 T 11-10-2018 IX88_02010 863a76325f4fbd138a37d6028316c706 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 267 35.308 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IX88_02010 863a76325f4fbd138a37d6028316c706 273 Gene3D G3DSA:3.40.50.720 7 266 9.6E-103 T 11-10-2018 IX88_02010 863a76325f4fbd138a37d6028316c706 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 130 266 1.1E-41 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IX88_02010 863a76325f4fbd138a37d6028316c706 273 SUPERFAMILY SSF55347 129 238 5.45E-38 T 11-10-2018 IX88_02010 863a76325f4fbd138a37d6028316c706 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 152 169 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IX88_02010 863a76325f4fbd138a37d6028316c706 273 PIRSF PIRSF000161 3 270 5.2E-87 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IX88_02010 863a76325f4fbd138a37d6028316c706 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 127 1.3E-42 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IX88_02010 863a76325f4fbd138a37d6028316c706 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 267 3.9E-99 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IX88_02010 863a76325f4fbd138a37d6028316c706 273 SUPERFAMILY SSF51735 5 270 5.05E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_04355 e78d83d7981f053b4221934fcc88bbcf 216 SUPERFAMILY SSF56784 1 210 2.0E-31 T 11-10-2018 IPR036412 HAD-like superfamily IX88_04355 e78d83d7981f053b4221934fcc88bbcf 216 Gene3D G3DSA:3.40.50.1000 3 211 8.9E-70 T 11-10-2018 IPR023214 HAD superfamily IX88_04355 e78d83d7981f053b4221934fcc88bbcf 216 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 186 5.4E-20 T 11-10-2018 IX88_04355 e78d83d7981f053b4221934fcc88bbcf 216 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 199 6.4E-39 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like IX88_04355 e78d83d7981f053b4221934fcc88bbcf 216 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 183 1.6E-31 T 11-10-2018 IX88_04355 e78d83d7981f053b4221934fcc88bbcf 216 Gene3D G3DSA:1.20.1440.100 15 88 8.9E-70 T 11-10-2018 IX88_05410 c0d38e5a6619e9a13e4e7616ca4db373 128 Pfam PF03412 Peptidase C39 family 6 48 7.1E-8 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 IX88_05410 c0d38e5a6619e9a13e4e7616ca4db373 128 Gene3D G3DSA:3.90.70.10 1 59 1.5E-11 T 11-10-2018 IX88_15395 0ca0bb943ef53a774f434c0751fea7f8 244 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 20 230 1.0E-105 T 11-10-2018 IX88_15395 0ca0bb943ef53a774f434c0751fea7f8 244 Gene3D G3DSA:1.10.3890.10 13 243 4.3E-59 T 11-10-2018 IPR035932 HflD-like superfamily IX88_15395 0ca0bb943ef53a774f434c0751fea7f8 244 Pfam PF04356 Protein of unknown function (DUF489) 17 231 1.9E-54 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD IX88_15395 0ca0bb943ef53a774f434c0751fea7f8 244 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 11 238 27.173 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD IX88_15395 0ca0bb943ef53a774f434c0751fea7f8 244 SUPERFAMILY SSF101322 14 237 1.19E-51 T 11-10-2018 IPR035932 HflD-like superfamily IX88_11815 47a4cca0e3b06fb06bf3da20d5ffceb4 33 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 27 5.1E-14 T 11-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 IX88_11815 47a4cca0e3b06fb06bf3da20d5ffceb4 33 Pfam PF08173 Membrane bound YbgT-like protein 1 26 2.0E-12 T 11-10-2018 IPR012994 Membrane bound YbgT-like IX88_14750 1ca6ed7cd5c47ed2c2cb42d6a322d75b 469 SUPERFAMILY SSF54368 2 99 2.35E-35 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 IX88_14750 1ca6ed7cd5c47ed2c2cb42d6a322d75b 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 94 2.2E-31 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 IX88_14750 1ca6ed7cd5c47ed2c2cb42d6a322d75b 469 Pfam PF00120 Glutamine synthetase, catalytic domain 101 466 1.6E-131 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 IX88_14750 1ca6ed7cd5c47ed2c2cb42d6a322d75b 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 2.0E-195 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 IX88_14750 1ca6ed7cd5c47ed2c2cb42d6a322d75b 469 SUPERFAMILY SSF55931 101 468 2.35E-129 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 IX88_14750 1ca6ed7cd5c47ed2c2cb42d6a322d75b 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 49 67 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 IX88_14750 1ca6ed7cd5c47ed2c2cb42d6a322d75b 469 SMART SM01230 101 379 1.1E-131 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 IX88_14750 1ca6ed7cd5c47ed2c2cb42d6a322d75b 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 11-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 IX88_14750 1ca6ed7cd5c47ed2c2cb42d6a322d75b 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 IX88_14750 1ca6ed7cd5c47ed2c2cb42d6a322d75b 469 Gene3D G3DSA:3.10.20.70 1 103 4.5E-38 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 IX88_14750 1ca6ed7cd5c47ed2c2cb42d6a322d75b 469 Gene3D G3DSA:3.30.590.10 104 457 1.7E-137 T 11-10-2018 IX88_08895 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 134 6.6E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08895 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 183 6.6E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08895 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 195 214 6.6E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08895 c7225a686bbd6c87cb7de9b9a0130127 292 Gene3D G3DSA:3.40.50.720 1 290 3.6E-88 T 11-10-2018 IX88_08895 c7225a686bbd6c87cb7de9b9a0130127 292 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 56 287 2.3E-62 T 11-10-2018 IX88_08895 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 134 7.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08895 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 235 7.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08895 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 185 7.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08895 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 214 7.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08895 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 48 65 7.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08895 c7225a686bbd6c87cb7de9b9a0130127 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 252 272 7.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08895 c7225a686bbd6c87cb7de9b9a0130127 292 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 182 210 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_08895 c7225a686bbd6c87cb7de9b9a0130127 292 SUPERFAMILY SSF51735 45 290 1.13E-80 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_11040 df24cb6afc58ded7c05ad379e72f90a1 442 Gene3D G3DSA:1.20.1600.10 31 440 1.9E-71 T 11-10-2018 IX88_11040 df24cb6afc58ded7c05ad379e72f90a1 442 Pfam PF02321 Outer membrane efflux protein 33 223 1.9E-20 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IX88_11040 df24cb6afc58ded7c05ad379e72f90a1 442 Pfam PF02321 Outer membrane efflux protein 243 419 2.0E-25 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IX88_11040 df24cb6afc58ded7c05ad379e72f90a1 442 SUPERFAMILY SSF56954 5 427 6.54E-74 T 11-10-2018 IX88_02620 1517a9aaa05240ca52ce70ebdd4cd77f 385 Pfam PF00534 Glycosyl transferases group 1 202 344 1.8E-30 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 IX88_02620 1517a9aaa05240ca52ce70ebdd4cd77f 385 Pfam PF13477 Glycosyl transferase 4-like 5 158 9.9E-13 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 IX88_02620 1517a9aaa05240ca52ce70ebdd4cd77f 385 Gene3D G3DSA:3.40.50.2000 22 370 6.2E-52 T 11-10-2018 IX88_02620 1517a9aaa05240ca52ce70ebdd4cd77f 385 SUPERFAMILY SSF53756 22 374 6.28E-66 T 11-10-2018 IX88_02620 1517a9aaa05240ca52ce70ebdd4cd77f 385 Gene3D G3DSA:3.40.50.2000 184 362 6.2E-52 T 11-10-2018 IX88_02430 22d23d922182166a2771eeb2b3c293d0 377 Pfam PF03595 Voltage-dependent anion channel 17 355 1.3E-78 T 11-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 IX88_02430 22d23d922182166a2771eeb2b3c293d0 377 Gene3D G3DSA:1.50.10.150 12 366 9.7E-16 T 11-10-2018 IPR038665 Voltage-dependent anion channel superfamily IX88_06715 a151d5089400e6c808b592213b81d2f7 262 Gene3D G3DSA:1.10.12.10 205 262 2.3E-19 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal IX88_06715 a151d5089400e6c808b592213b81d2f7 262 SUPERFAMILY SSF52096 7 261 9.36E-64 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_06715 a151d5089400e6c808b592213b81d2f7 262 Gene3D G3DSA:3.90.226.10 2 204 1.6E-57 T 11-10-2018 IX88_06715 a151d5089400e6c808b592213b81d2f7 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 261 2.4E-42 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 IX88_00245 d27461b013ebf335c902f56afb31fdac 133 SUPERFAMILY SSF55811 3 125 1.16E-22 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 IX88_00245 d27461b013ebf335c902f56afb31fdac 133 Gene3D G3DSA:3.90.79.10 1 130 6.4E-24 T 11-10-2018 IX88_00245 d27461b013ebf335c902f56afb31fdac 133 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 IX88_00245 d27461b013ebf335c902f56afb31fdac 133 Pfam PF00293 NUDIX domain 6 124 6.0E-18 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 IX88_08685 c30c51a64911d042803d4036bc035541 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 7.2E-29 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_08685 c30c51a64911d042803d4036bc035541 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 IX88_08685 c30c51a64911d042803d4036bc035541 383 PIRSF PIRSF016578 125 379 1.0E-12 T 11-10-2018 IX88_08685 c30c51a64911d042803d4036bc035541 383 PIRSF PIRSF016578 2 83 4.4E-5 T 11-10-2018 IX88_08685 c30c51a64911d042803d4036bc035541 383 Gene3D G3DSA:1.20.140.10 237 383 1.5E-54 T 11-10-2018 IX88_08685 c30c51a64911d042803d4036bc035541 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 378 4.8E-48 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_08685 c30c51a64911d042803d4036bc035541 383 Gene3D G3DSA:1.10.540.10 4 119 2.1E-28 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_08685 c30c51a64911d042803d4036bc035541 383 SUPERFAMILY SSF56645 6 243 1.96E-76 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_08685 c30c51a64911d042803d4036bc035541 383 SUPERFAMILY SSF47203 229 380 4.51E-55 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_08685 c30c51a64911d042803d4036bc035541 383 Gene3D G3DSA:2.40.110.10 120 236 1.8E-41 T 11-10-2018 IX88_08685 c30c51a64911d042803d4036bc035541 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 IX88_08685 c30c51a64911d042803d4036bc035541 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 5.3E-27 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_03380 e732e7b5ca83404ac5ac20423919d43f 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 347 2.0E-94 T 11-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 IX88_03380 e732e7b5ca83404ac5ac20423919d43f 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 348 1.2E-76 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 IX88_17935 000e65a5e94014cd99202e79e73141f4 324 SUPERFAMILY SSF53659 5 322 1.98E-100 T 11-10-2018 IX88_17935 000e65a5e94014cd99202e79e73141f4 324 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 321 4.3E-119 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 IX88_17935 000e65a5e94014cd99202e79e73141f4 324 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 324 33.001 T 11-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 IX88_17935 000e65a5e94014cd99202e79e73141f4 324 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 318 3.8E-102 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 IX88_17935 000e65a5e94014cd99202e79e73141f4 324 Gene3D G3DSA:3.40.718.10 3 324 1.1E-115 T 11-10-2018 IX88_14805 b82d17c13bebcbff4945161a4707bae5 217 Gene3D G3DSA:3.60.21.10 1 217 1.7E-54 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like IX88_14805 b82d17c13bebcbff4945161a4707bae5 217 SUPERFAMILY SSF56300 4 216 1.9E-38 T 11-10-2018 IX88_14805 b82d17c13bebcbff4945161a4707bae5 217 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 64 69 - T 11-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 IX88_14805 b82d17c13bebcbff4945161a4707bae5 217 Pfam PF00149 Calcineurin-like phosphoesterase 6 188 1.4E-13 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 IX88_14805 b82d17c13bebcbff4945161a4707bae5 217 PRINTS PR00114 Serine/threonine phosphatase family signature 36 63 4.9E-5 T 11-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 IX88_14805 b82d17c13bebcbff4945161a4707bae5 217 PRINTS PR00114 Serine/threonine phosphatase family signature 6 33 4.9E-5 T 11-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 IX88_02460 c6fa5754f9f6403a7961cbb158edb4d9 327 Gene3D G3DSA:1.10.8.450 252 286 1.6E-108 T 11-10-2018 IX88_02460 c6fa5754f9f6403a7961cbb158edb4d9 327 Gene3D G3DSA:3.40.190.10 43 317 1.6E-108 T 11-10-2018 IX88_02460 c6fa5754f9f6403a7961cbb158edb4d9 327 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 43 325 5.9E-79 T 11-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 IX88_02460 c6fa5754f9f6403a7961cbb158edb4d9 327 SMART SM00062 42 257 6.3E-21 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IX88_02460 c6fa5754f9f6403a7961cbb158edb4d9 327 SUPERFAMILY SSF53850 41 274 3.81E-50 T 11-10-2018 IX88_02460 c6fa5754f9f6403a7961cbb158edb4d9 327 Gene3D G3DSA:3.40.190.10 121 220 1.6E-108 T 11-10-2018 IX88_02460 c6fa5754f9f6403a7961cbb158edb4d9 327 Pfam PF13379 NMT1-like family 39 265 2.1E-19 T 11-10-2018 IX88_04105 23cb8ee0129f7a5f2816dba5d1aff994 403 Gene3D G3DSA:3.30.460.20 14 146 3.4E-5 T 11-10-2018 IX88_04105 23cb8ee0129f7a5f2816dba5d1aff994 403 SUPERFAMILY SSF144083 293 355 7.85E-20 T 11-10-2018 IX88_04105 23cb8ee0129f7a5f2816dba5d1aff994 403 Gene3D G3DSA:1.20.58.340 163 299 3.0E-7 T 11-10-2018 IX88_04105 23cb8ee0129f7a5f2816dba5d1aff994 403 Pfam PF01544 CorA-like Mg2+ transporter protein 47 354 7.6E-46 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 IX88_04105 23cb8ee0129f7a5f2816dba5d1aff994 403 SUPERFAMILY SSF143865 38 291 9.94E-18 T 11-10-2018 IX88_04105 23cb8ee0129f7a5f2816dba5d1aff994 403 Gene3D G3DSA:1.20.58.340 301 357 3.3E-20 T 11-10-2018 IX88_13150 78f01cf36d98fd87bf44a5d2a8b90567 150 Pfam PF04284 Protein of unknown function (DUF441) 10 148 3.9E-46 T 11-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame IX88_13150 78f01cf36d98fd87bf44a5d2a8b90567 150 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 22 133 7.0E-40 T 11-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame IX88_13150 78f01cf36d98fd87bf44a5d2a8b90567 150 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 6 150 18.004 T 11-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame IX88_13875 d693afa192b450f22ffe1b7300da1105 502 SUPERFAMILY SSF52151 156 484 2.88E-46 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IX88_13875 d693afa192b450f22ffe1b7300da1105 502 Pfam PF01734 Patatin-like phospholipase 157 339 1.9E-24 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 IX88_13875 d693afa192b450f22ffe1b7300da1105 502 Gene3D G3DSA:3.40.1090.10 237 367 1.1E-13 T 11-10-2018 IX88_13875 d693afa192b450f22ffe1b7300da1105 502 Pfam PF11815 Domain of unknown function (DUF3336) 15 149 5.6E-35 T 11-10-2018 IPR021771 Triacylglycerol lipase GO:0004806|GO:0006629 IX88_01460 57346a2c3e1b421855f6044a5e60fe0b 482 Gene3D G3DSA:3.40.1190.10 111 324 1.5E-82 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IX88_01460 57346a2c3e1b421855f6044a5e60fe0b 482 SUPERFAMILY SSF53623 108 325 1.7E-74 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 IX88_01460 57346a2c3e1b421855f6044a5e60fe0b 482 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 416 1.4E-22 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 IX88_01460 57346a2c3e1b421855f6044a5e60fe0b 482 Gene3D G3DSA:3.40.50.720 23 110 8.7E-33 T 11-10-2018 IX88_01460 57346a2c3e1b421855f6044a5e60fe0b 482 Gene3D G3DSA:3.90.190.20 325 480 1.1E-45 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IX88_01460 57346a2c3e1b421855f6044a5e60fe0b 482 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 24 473 1.7E-170 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_01460 57346a2c3e1b421855f6044a5e60fe0b 482 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 480 43.174 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 IX88_01460 57346a2c3e1b421855f6044a5e60fe0b 482 Pfam PF01225 Mur ligase family, catalytic domain 24 122 1.2E-29 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 IX88_01460 57346a2c3e1b421855f6044a5e60fe0b 482 SUPERFAMILY SSF53244 326 475 1.14E-45 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 IX88_01460 57346a2c3e1b421855f6044a5e60fe0b 482 SUPERFAMILY SSF51984 22 109 1.7E-29 T 11-10-2018 IX88_01460 57346a2c3e1b421855f6044a5e60fe0b 482 Pfam PF08245 Mur ligase middle domain 127 307 5.7E-30 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 IX88_03940 47889d8e72aa94af7a8e5c5df3631786 570 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 46 151 2.3E-14 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal IX88_03940 47889d8e72aa94af7a8e5c5df3631786 570 SUPERFAMILY SSF160246 6 147 1.05E-29 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily IX88_03940 47889d8e72aa94af7a8e5c5df3631786 570 SUPERFAMILY SSF52540 182 568 5.27E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_03940 47889d8e72aa94af7a8e5c5df3631786 570 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 14 569 9.7E-261 T 11-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 IX88_03940 47889d8e72aa94af7a8e5c5df3631786 570 Gene3D G3DSA:3.30.450.90 157 292 6.7E-48 T 11-10-2018 IX88_03940 47889d8e72aa94af7a8e5c5df3631786 570 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 387 401 - T 11-10-2018 IPR001482 Type II/IV secretion system protein IX88_03940 47889d8e72aa94af7a8e5c5df3631786 570 Gene3D G3DSA:3.40.50.300 295 570 4.4E-105 T 11-10-2018 IX88_03940 47889d8e72aa94af7a8e5c5df3631786 570 Pfam PF00437 Type II/IV secretion system protein 193 459 2.4E-90 T 11-10-2018 IPR001482 Type II/IV secretion system protein IX88_01215 af60a220c89c3a5b707b763ef9428954 193 SUPERFAMILY SSF50249 2 193 8.57E-51 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_01215 af60a220c89c3a5b707b763ef9428954 193 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 34.897 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 IX88_01215 af60a220c89c3a5b707b763ef9428954 193 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 193 2.0E-50 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 IX88_01215 af60a220c89c3a5b707b763ef9428954 193 Gene3D G3DSA:2.40.50.140 1 122 2.2E-43 T 11-10-2018 IX88_01215 af60a220c89c3a5b707b763ef9428954 193 Pfam PF00436 Single-strand binding protein family 4 108 2.7E-38 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 IX88_01165 f76c24620e92cc4c9542ce1bb48600a3 290 PIRSF PIRSF006232 6 290 1.4E-83 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 IX88_01165 f76c24620e92cc4c9542ce1bb48600a3 290 Pfam PF02678 Pirin 22 127 2.0E-31 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 IX88_01165 f76c24620e92cc4c9542ce1bb48600a3 290 SUPERFAMILY SSF51182 2 287 1.34E-77 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_01165 f76c24620e92cc4c9542ce1bb48600a3 290 Gene3D G3DSA:2.60.120.10 17 279 1.7E-79 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_01165 f76c24620e92cc4c9542ce1bb48600a3 290 Gene3D G3DSA:2.60.120.10 149 253 1.7E-79 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_01165 f76c24620e92cc4c9542ce1bb48600a3 290 Pfam PF05726 Pirin C-terminal cupin domain 183 284 1.4E-27 T 11-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 IX88_08495 09d322004841ab91a99a1090f0500f1b 303 SUPERFAMILY SSF46785 2 110 1.69E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_08495 09d322004841ab91a99a1090f0500f1b 303 Gene3D G3DSA:3.40.190.10 172 260 6.0E-6 T 11-10-2018 IX88_08495 09d322004841ab91a99a1090f0500f1b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_08495 09d322004841ab91a99a1090f0500f1b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_08495 09d322004841ab91a99a1090f0500f1b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_08495 09d322004841ab91a99a1090f0500f1b 303 Pfam PF03466 LysR substrate binding domain 86 265 4.0E-28 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_08495 09d322004841ab91a99a1090f0500f1b 303 Gene3D G3DSA:1.10.10.10 1 80 7.7E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_08495 09d322004841ab91a99a1090f0500f1b 303 SUPERFAMILY SSF53850 87 275 8.22E-30 T 11-10-2018 IX88_08495 09d322004841ab91a99a1090f0500f1b 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.0E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_08495 09d322004841ab91a99a1090f0500f1b 303 Gene3D G3DSA:3.40.190.10 81 171 5.4E-15 T 11-10-2018 IX88_11855 d0f31544f30bca5c065500d70792de0b 77 SUPERFAMILY SSF81901 18 74 1.57E-7 T 11-10-2018 IX88_11855 d0f31544f30bca5c065500d70792de0b 77 Gene3D G3DSA:1.25.40.10 2 77 2.6E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_08670 d918fc57a203f113ac00f53626e146a7 395 PIRSF PIRSF000524 21 394 1.3E-57 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 IX88_08670 d918fc57a203f113ac00f53626e146a7 395 SUPERFAMILY SSF53383 26 385 8.01E-87 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_08670 d918fc57a203f113ac00f53626e146a7 395 Gene3D G3DSA:3.40.640.10 39 284 4.3E-113 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_08670 d918fc57a203f113ac00f53626e146a7 395 Pfam PF00266 Aminotransferase class-V 54 334 9.7E-32 T 11-10-2018 IPR000192 Aminotransferase class V domain IX88_08670 d918fc57a203f113ac00f53626e146a7 395 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 29 383 1.6E-150 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 IX88_08670 d918fc57a203f113ac00f53626e146a7 395 Gene3D G3DSA:3.90.1150.10 31 375 4.3E-113 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_08670 d918fc57a203f113ac00f53626e146a7 395 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 25 385 1.8E-175 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 IX88_08670 d918fc57a203f113ac00f53626e146a7 395 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 394 185.934 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 IX88_14045 5ea88ba54fea415b00ce301842883674 159 Pfam PF11650 P22 tail accessory factor 3 133 3.5E-12 T 11-10-2018 IPR020362 Tail accessory factor GP4 IX88_14045 5ea88ba54fea415b00ce301842883674 159 ProDom PD097046 DNA STABILIZATION GP4 PACKAGED LATE HEAD GENE SEQUENCING DIRECT COMPLETION 4 132 8.0E-7 T 11-10-2018 IPR020362 Tail accessory factor GP4 IX88_14045 5ea88ba54fea415b00ce301842883674 159 Gene3D G3DSA:1.10.3230.20 2 138 1.9E-35 T 11-10-2018 IPR038258 Peptidoglycan hydrolase Gp4 superfamily IX88_11345 147c36b1be9e8373b8a7efb97b5964cd 355 Gene3D G3DSA:3.40.50.720 8 153 3.8E-28 T 11-10-2018 IX88_11345 147c36b1be9e8373b8a7efb97b5964cd 355 SUPERFAMILY SSF51735 7 142 8.59E-19 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_11345 147c36b1be9e8373b8a7efb97b5964cd 355 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 10 124 2.6E-14 T 11-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 IX88_12715 4f28defea5c1d346e6903988f0fcb570 446 Pfam PF03929 PepSY-associated TM region 15 381 4.8E-58 T 11-10-2018 IPR005625 PepSY-associated TM protein IX88_06590 75f3783f087579f5e7ac9159201e11a4 314 PIRSF PIRSF001365 1 312 3.3E-65 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_06590 75f3783f087579f5e7ac9159201e11a4 314 Pfam PF00701 Dihydrodipicolinate synthetase family 5 301 8.1E-42 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_06590 75f3783f087579f5e7ac9159201e11a4 314 SUPERFAMILY SSF51569 2 303 6.7E-66 T 11-10-2018 IX88_06590 75f3783f087579f5e7ac9159201e11a4 314 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 9.0E-7 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_06590 75f3783f087579f5e7ac9159201e11a4 314 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 9.0E-7 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_06590 75f3783f087579f5e7ac9159201e11a4 314 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 9.0E-7 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_06590 75f3783f087579f5e7ac9159201e11a4 314 SMART SM01130 4 303 4.6E-66 T 11-10-2018 IPR002220 DapA-like GO:0016829 IX88_06590 75f3783f087579f5e7ac9159201e11a4 314 Gene3D G3DSA:3.20.20.70 2 304 1.0E-65 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_05550 f41c8e3fc19ab5ee741e0ea20a4377f8 331 Gene3D G3DSA:3.20.20.140 1 331 1.7E-96 T 11-10-2018 IX88_05550 f41c8e3fc19ab5ee741e0ea20a4377f8 331 Pfam PF00962 Adenosine/AMP deaminase 6 328 1.0E-91 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 IX88_05550 f41c8e3fc19ab5ee741e0ea20a4377f8 331 Hamap MF_00540 Adenosine deaminase [add]. 1 331 52.279 T 11-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 IX88_05550 f41c8e3fc19ab5ee741e0ea20a4377f8 331 SUPERFAMILY SSF51556 3 326 3.11E-74 T 11-10-2018 IPR032466 Metal-dependent hydrolase IX88_05550 f41c8e3fc19ab5ee741e0ea20a4377f8 331 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 329 1.7E-109 T 11-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 IX88_06230 2d4265d439853d9102f9800b108088e3 326 Gene3D G3DSA:3.40.190.10 95 291 7.5E-54 T 11-10-2018 IX88_06230 2d4265d439853d9102f9800b108088e3 326 SUPERFAMILY SSF46785 6 87 3.1E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_06230 2d4265d439853d9102f9800b108088e3 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.3E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_06230 2d4265d439853d9102f9800b108088e3 326 Pfam PF03466 LysR substrate binding domain 93 294 7.0E-28 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_06230 2d4265d439853d9102f9800b108088e3 326 Gene3D G3DSA:1.10.10.10 6 90 2.0E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_06230 2d4265d439853d9102f9800b108088e3 326 Gene3D G3DSA:3.40.190.10 166 267 7.5E-54 T 11-10-2018 IX88_06230 2d4265d439853d9102f9800b108088e3 326 SUPERFAMILY SSF53850 93 295 6.15E-34 T 11-10-2018 IX88_11055 c1f143019151aeaed1626ce03ffc07a2 515 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 506 1.3E-112 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 IX88_11055 c1f143019151aeaed1626ce03ffc07a2 515 Gene3D G3DSA:1.20.1720.10 20 198 2.1E-33 T 11-10-2018 IX88_11055 c1f143019151aeaed1626ce03ffc07a2 515 Pfam PF07690 Major Facilitator Superfamily 21 417 1.7E-41 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_11055 c1f143019151aeaed1626ce03ffc07a2 515 SUPERFAMILY SSF103473 7 510 3.79E-59 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_11055 c1f143019151aeaed1626ce03ffc07a2 515 Gene3D G3DSA:1.20.1250.20 267 513 5.4E-16 T 11-10-2018 IX88_17505 533ba8d6cd71c249222b954a6cfb9c94 192 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 126 136 - T 11-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 IX88_17505 533ba8d6cd71c249222b954a6cfb9c94 192 SUPERFAMILY SSF52799 38 164 6.39E-25 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like IX88_17505 533ba8d6cd71c249222b954a6cfb9c94 192 Pfam PF00782 Dual specificity phosphatase, catalytic domain 54 160 3.6E-11 T 11-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 IX88_17505 533ba8d6cd71c249222b954a6cfb9c94 192 Gene3D G3DSA:3.90.190.10 28 191 3.9E-35 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like IX88_01330 d3a93693ef2dc9647c7d3f4ded83e3af 191 Pfam PF05656 Protein of unknown function (DUF805) 20 138 1.9E-20 T 11-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 IX88_16125 cadc246ee5f76417d7a17ede4385a9e3 356 Pfam PF12698 ABC-2 family transporter protein 1 343 5.6E-27 T 11-10-2018 IX88_16125 cadc246ee5f76417d7a17ede4385a9e3 356 Gene3D G3DSA:3.40.1710.10 20 135 6.5E-6 T 11-10-2018 IX88_13655 4aa1ef4b6ac85a35bd6ccff933839b75 296 Pfam PF00892 EamA-like transporter family 156 284 1.0E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_13655 4aa1ef4b6ac85a35bd6ccff933839b75 296 Pfam PF00892 EamA-like transporter family 12 142 1.4E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_13655 4aa1ef4b6ac85a35bd6ccff933839b75 296 SUPERFAMILY SSF103481 191 288 8.24E-17 T 11-10-2018 IX88_13655 4aa1ef4b6ac85a35bd6ccff933839b75 296 SUPERFAMILY SSF103481 42 143 8.76E-14 T 11-10-2018 IX88_17815 b6ec0f3294007f6415a6a1f27ba33c09 164 SUPERFAMILY SSF54637 25 163 1.49E-21 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_17815 b6ec0f3294007f6415a6a1f27ba33c09 164 Gene3D G3DSA:3.10.129.10 10 158 8.3E-36 T 11-10-2018 IX88_17815 b6ec0f3294007f6415a6a1f27ba33c09 164 Pfam PF14539 Domain of unknown function (DUF4442) 24 156 2.5E-33 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 IX88_12075 fa629da454da9317540107843512f5e7 398 SUPERFAMILY SSF69055 301 395 4.05E-31 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 IX88_12075 fa629da454da9317540107843512f5e7 398 Gene3D G3DSA:1.10.1740.10 312 398 1.0E-32 T 11-10-2018 IX88_12075 fa629da454da9317540107843512f5e7 398 SUPERFAMILY SSF51735 3 151 8.05E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_12075 fa629da454da9317540107843512f5e7 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 392 45.647 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 IX88_12075 fa629da454da9317540107843512f5e7 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 133 7.3E-44 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 IX88_12075 fa629da454da9317540107843512f5e7 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 147 239 6.3E-37 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 IX88_12075 fa629da454da9317540107843512f5e7 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 2.8E-41 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 IX88_12075 fa629da454da9317540107843512f5e7 398 Gene3D G3DSA:3.40.50.720 1 151 4.3E-58 T 11-10-2018 IX88_12075 fa629da454da9317540107843512f5e7 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 394 4.9E-149 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 IX88_12075 fa629da454da9317540107843512f5e7 398 SUPERFAMILY SSF55347 127 274 1.28E-59 T 11-10-2018 IX88_12075 fa629da454da9317540107843512f5e7 398 PIRSF PIRSF006205 2 397 1.4E-149 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 IX88_09500 4813cb45ebb7156cc9b2a163b9c9eb1a 471 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 21 442 1.8E-50 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 IX88_09500 4813cb45ebb7156cc9b2a163b9c9eb1a 471 PIRSF PIRSF002744 1 468 4.9E-101 T 11-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 IX88_09500 4813cb45ebb7156cc9b2a163b9c9eb1a 471 Gene3D G3DSA:1.10.4160.10 6 465 2.1E-46 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily IX88_10010 6b03d9eba9bb63f14ca453c251bf312c 221 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 80 5.0E-7 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 IX88_10010 6b03d9eba9bb63f14ca453c251bf312c 221 Gene3D G3DSA:3.40.50.720 1 220 2.4E-49 T 11-10-2018 IX88_10010 6b03d9eba9bb63f14ca453c251bf312c 221 SUPERFAMILY SSF51735 2 207 8.62E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_09080 feb3b7329a64157383bb0d8f6e8fea9d 99 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 95 7.1E-36 T 11-10-2018 IPR009662 Malonate decarboxylase delta subunit IX88_09080 feb3b7329a64157383bb0d8f6e8fea9d 99 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 99 50.867 T 11-10-2018 IPR009662 Malonate decarboxylase delta subunit IX88_09080 feb3b7329a64157383bb0d8f6e8fea9d 99 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 16 95 4.6E-25 T 11-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein IX88_09080 feb3b7329a64157383bb0d8f6e8fea9d 99 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 94 4.0E-35 T 11-10-2018 IPR009662 Malonate decarboxylase delta subunit IX88_06455 417a1ab7851db7e07ce3caa6cd62205c 372 Gene3D G3DSA:3.40.50.300 102 355 1.9E-84 T 11-10-2018 IX88_06455 417a1ab7851db7e07ce3caa6cd62205c 372 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 345 9.5E-128 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 IX88_06455 417a1ab7851db7e07ce3caa6cd62205c 372 SUPERFAMILY SSF52540 4 338 2.11E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_06455 417a1ab7851db7e07ce3caa6cd62205c 372 Gene3D G3DSA:3.30.450.90 1 100 7.3E-25 T 11-10-2018 IX88_06455 417a1ab7851db7e07ce3caa6cd62205c 372 Pfam PF00437 Type II/IV secretion system protein 31 269 6.9E-35 T 11-10-2018 IPR001482 Type II/IV secretion system protein IX88_04500 0cfe908ba60c2b9454df310d971d86d0 190 Pfam PF03729 Short repeat of unknown function (DUF308) 80 148 1.5E-8 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane IX88_04500 0cfe908ba60c2b9454df310d971d86d0 190 Pfam PF03729 Short repeat of unknown function (DUF308) 22 91 2.2E-10 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane IX88_08340 a8f4a96481d536339fc59b99ad89186c 488 SUPERFAMILY SSF56954 82 469 3.01E-63 T 11-10-2018 IX88_08340 a8f4a96481d536339fc59b99ad89186c 488 Pfam PF02321 Outer membrane efflux protein 84 263 1.1E-22 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IX88_08340 a8f4a96481d536339fc59b99ad89186c 488 Pfam PF02321 Outer membrane efflux protein 293 468 1.4E-20 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IX88_08340 a8f4a96481d536339fc59b99ad89186c 488 Gene3D G3DSA:1.20.1600.10 83 479 1.7E-60 T 11-10-2018 IX88_11640 ff4d80d4ddf6ee224ebfb3e3712593ff 238 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 14 234 3.5E-67 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 IX88_11640 ff4d80d4ddf6ee224ebfb3e3712593ff 238 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 12 234 39.257 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 IX88_11640 ff4d80d4ddf6ee224ebfb3e3712593ff 238 Gene3D G3DSA:3.90.550.10 6 237 1.6E-67 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_11640 ff4d80d4ddf6ee224ebfb3e3712593ff 238 SUPERFAMILY SSF53448 13 235 1.89E-52 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_11640 ff4d80d4ddf6ee224ebfb3e3712593ff 238 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 14 235 1.0E-63 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 IX88_11640 ff4d80d4ddf6ee224ebfb3e3712593ff 238 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 110 117 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 IX88_07135 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 Gene3D G3DSA:3.40.50.300 1 217 9.4E-81 T 11-10-2018 IX88_07135 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 Hamap MF_00235 Adenylate kinase [adk]. 1 216 51.096 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 IX88_07135 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 SUPERFAMILY SSF52540 1 216 8.44E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_07135 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 Pfam PF00406 Adenylate kinase 5 185 1.0E-54 T 11-10-2018 IX88_07135 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.1E-73 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 IX88_07135 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 IX88_07135 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 PRINTS PR00094 Adenylate kinase signature 32 46 3.4E-32 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 IX88_07135 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 PRINTS PR00094 Adenylate kinase signature 81 97 3.4E-32 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 IX88_07135 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 PRINTS PR00094 Adenylate kinase signature 4 17 3.4E-32 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 IX88_07135 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 PRINTS PR00094 Adenylate kinase signature 173 187 3.4E-32 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 IX88_07135 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 PRINTS PR00094 Adenylate kinase signature 156 171 3.4E-32 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 IX88_07135 9941adc3ed2cbf6dc5bbe13d353ff4f1 217 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.3E-16 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 IX88_06825 93352096fe35bf64bb424bfc9f5de018 406 Gene3D G3DSA:1.20.1250.20 21 209 8.5E-22 T 11-10-2018 IX88_06825 93352096fe35bf64bb424bfc9f5de018 406 SUPERFAMILY SSF103473 21 400 3.53E-53 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_06825 93352096fe35bf64bb424bfc9f5de018 406 Gene3D G3DSA:1.20.1250.20 226 404 1.3E-16 T 11-10-2018 IX88_06825 93352096fe35bf64bb424bfc9f5de018 406 Pfam PF07690 Major Facilitator Superfamily 32 254 1.7E-19 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_04410 94eb07810ee6dde72248cfc104ce16f2 265 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 33.034 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_04410 94eb07810ee6dde72248cfc104ce16f2 265 Gene3D G3DSA:3.30.70.580 1 106 8.3E-34 T 11-10-2018 IX88_04410 94eb07810ee6dde72248cfc104ce16f2 265 PIRSF PIRSF001430 1 254 5.9E-75 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_04410 94eb07810ee6dde72248cfc104ce16f2 265 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 239 8.4E-63 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_04410 94eb07810ee6dde72248cfc104ce16f2 265 SUPERFAMILY SSF55120 1 259 6.19E-85 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_04410 94eb07810ee6dde72248cfc104ce16f2 265 Gene3D G3DSA:3.30.70.660 107 243 6.6E-47 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 IX88_04410 94eb07810ee6dde72248cfc104ce16f2 265 Pfam PF01416 tRNA pseudouridine synthase 144 246 1.9E-27 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_04410 94eb07810ee6dde72248cfc104ce16f2 265 Pfam PF01416 tRNA pseudouridine synthase 11 104 2.3E-5 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_02145 8b6481725f898781c84c0bf0b8f5f177 281 Pfam PF00561 alpha/beta hydrolase fold 28 265 5.5E-23 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_02145 8b6481725f898781c84c0bf0b8f5f177 281 PRINTS PR00412 Epoxide hydrolase signature 99 112 4.1E-11 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 IX88_02145 8b6481725f898781c84c0bf0b8f5f177 281 PRINTS PR00412 Epoxide hydrolase signature 54 69 4.1E-11 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 IX88_02145 8b6481725f898781c84c0bf0b8f5f177 281 PRINTS PR00412 Epoxide hydrolase signature 221 237 4.1E-11 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 IX88_02145 8b6481725f898781c84c0bf0b8f5f177 281 PRINTS PR00412 Epoxide hydrolase signature 34 52 4.1E-11 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 IX88_02145 8b6481725f898781c84c0bf0b8f5f177 281 PRINTS PR00412 Epoxide hydrolase signature 254 276 4.1E-11 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 IX88_02145 8b6481725f898781c84c0bf0b8f5f177 281 SUPERFAMILY SSF53474 13 275 2.84E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_02145 8b6481725f898781c84c0bf0b8f5f177 281 Gene3D G3DSA:3.40.50.1820 7 275 5.7E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_07890 f6740b4b45b53ca4058c14eca5e5cbbb 207 Gene3D G3DSA:1.10.357.10 11 198 1.4E-20 T 11-10-2018 IX88_07890 f6740b4b45b53ca4058c14eca5e5cbbb 207 SUPERFAMILY SSF46689 4 81 1.3E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_07890 f6740b4b45b53ca4058c14eca5e5cbbb 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 2.1E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_07890 f6740b4b45b53ca4058c14eca5e5cbbb 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 60 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site IX88_17460 420dd0b05ea08f3642b3725c4a8e1843 286 SUPERFAMILY SSF52151 6 283 2.54E-35 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IX88_17460 420dd0b05ea08f3642b3725c4a8e1843 286 Gene3D G3DSA:3.40.1090.10 2 110 7.8E-11 T 11-10-2018 IX88_17460 420dd0b05ea08f3642b3725c4a8e1843 286 Pfam PF01734 Patatin-like phospholipase 9 171 1.5E-16 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 IX88_17765 64f9814553ab7046f11b6efca6f95735 417 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 199 382 7.7E-72 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 IX88_17765 64f9814553ab7046f11b6efca6f95735 417 Gene3D G3DSA:3.40.50.1950 4 194 3.7E-60 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 IX88_17765 64f9814553ab7046f11b6efca6f95735 417 SUPERFAMILY SSF102645 198 415 1.7E-73 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 IX88_17765 64f9814553ab7046f11b6efca6f95735 417 Gene3D G3DSA:3.40.50.10300 197 417 8.6E-78 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 IX88_17765 64f9814553ab7046f11b6efca6f95735 417 Pfam PF02441 Flavoprotein 11 182 1.1E-48 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 IX88_17765 64f9814553ab7046f11b6efca6f95735 417 SUPERFAMILY SSF52507 7 185 2.35E-63 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 IX88_17765 64f9814553ab7046f11b6efca6f95735 417 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 10 410 1.0E-145 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 IX88_11695 7194e1d330edcd98cf92d312c7af0b29 674 SUPERFAMILY SSF51395 4 363 5.07E-112 T 11-10-2018 IX88_11695 7194e1d330edcd98cf92d312c7af0b29 674 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 497 521 1.5E-7 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_11695 7194e1d330edcd98cf92d312c7af0b29 674 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 377 399 1.5E-7 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 IX88_11695 7194e1d330edcd98cf92d312c7af0b29 674 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 640 1.5E-22 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 IX88_11695 7194e1d330edcd98cf92d312c7af0b29 674 SUPERFAMILY SSF51971 334 522 4.71E-39 T 11-10-2018 IX88_11695 7194e1d330edcd98cf92d312c7af0b29 674 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 4.8E-88 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 IX88_11695 7194e1d330edcd98cf92d312c7af0b29 674 Gene3D G3DSA:3.40.50.720 376 667 1.3E-115 T 11-10-2018 IX88_11695 7194e1d330edcd98cf92d312c7af0b29 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 3.9E-17 T 11-10-2018 IX88_11695 7194e1d330edcd98cf92d312c7af0b29 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 461 479 3.9E-17 T 11-10-2018 IX88_11695 7194e1d330edcd98cf92d312c7af0b29 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 620 636 3.9E-17 T 11-10-2018 IX88_11695 7194e1d330edcd98cf92d312c7af0b29 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 501 519 3.9E-17 T 11-10-2018 IX88_11695 7194e1d330edcd98cf92d312c7af0b29 674 Gene3D G3DSA:3.50.50.60 473 627 1.3E-115 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_11695 7194e1d330edcd98cf92d312c7af0b29 674 SUPERFAMILY SSF51905 465 652 2.98E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_11695 7194e1d330edcd98cf92d312c7af0b29 674 Gene3D G3DSA:3.20.20.70 3 369 2.5E-126 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_07495 0a941f53178ea722859d41450db3d5d4 170 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 6 161 16.493 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 IX88_07495 0a941f53178ea722859d41450db3d5d4 170 ProSitePatterns PS00855 Signal peptidases II signature. 103 115 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 IX88_07495 0a941f53178ea722859d41450db3d5d4 170 Pfam PF01252 Signal peptidase (SPase) II 18 155 2.0E-37 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 IX88_07495 0a941f53178ea722859d41450db3d5d4 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 136 152 4.2E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 IX88_07495 0a941f53178ea722859d41450db3d5d4 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 4.2E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 IX88_07495 0a941f53178ea722859d41450db3d5d4 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 100 115 4.2E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 IX88_07495 0a941f53178ea722859d41450db3d5d4 170 TIGRFAM TIGR00077 lspA: signal peptidase II 10 162 1.2E-41 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 IX88_01780 0587cbd1f2cf8e038c1765a66c6d3f64 612 SUPERFAMILY SSF56235 2 222 3.43E-72 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IX88_01780 0587cbd1f2cf8e038c1765a66c6d3f64 612 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 612 40.379 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 IX88_01780 0587cbd1f2cf8e038c1765a66c6d3f64 612 Gene3D G3DSA:3.40.50.10490 247 611 5.5E-144 T 11-10-2018 IX88_01780 0587cbd1f2cf8e038c1765a66c6d3f64 612 SUPERFAMILY SSF53697 244 612 1.86E-108 T 11-10-2018 IX88_01780 0587cbd1f2cf8e038c1765a66c6d3f64 612 Gene3D G3DSA:3.40.50.10490 450 597 5.5E-144 T 11-10-2018 IX88_01780 0587cbd1f2cf8e038c1765a66c6d3f64 612 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 612 5.4E-254 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 IX88_01780 0587cbd1f2cf8e038c1765a66c6d3f64 612 Pfam PF13522 Glutamine amidotransferase domain 62 180 8.8E-22 T 11-10-2018 IX88_01780 0587cbd1f2cf8e038c1765a66c6d3f64 612 Gene3D G3DSA:3.60.20.10 2 238 2.3E-77 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IX88_01780 0587cbd1f2cf8e038c1765a66c6d3f64 612 Pfam PF01380 SIS domain 288 420 1.1E-30 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 IX88_01780 0587cbd1f2cf8e038c1765a66c6d3f64 612 Pfam PF01380 SIS domain 466 594 1.4E-28 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 IX88_06050 ea3b080276623ec7615600eb34b067b4 263 Pfam PF02616 Segregation and condensation protein ScpA 53 142 1.2E-13 T 11-10-2018 IPR003768 Segregation and condensation protein A IX88_09945 027797e51b241c28c5d64d423eb1c5ed 889 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 180 4.3E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_09945 027797e51b241c28c5d64d423eb1c5ed 889 SUPERFAMILY SSF56935 55 889 1.71E-99 T 11-10-2018 IX88_09945 027797e51b241c28c5d64d423eb1c5ed 889 Gene3D G3DSA:2.170.130.10 48 183 3.8E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_09945 027797e51b241c28c5d64d423eb1c5ed 889 Pfam PF00593 TonB dependent receptor 381 888 1.9E-50 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_04995 285de42a9b52080722d07c41d862fa4f 169 Gene3D G3DSA:3.90.1720.10 52 168 8.0E-30 T 11-10-2018 IX88_17125 aba43f36e67349d9b6fc6f5826ed1bea 411 Gene3D G3DSA:3.30.70.260 331 410 4.6E-6 T 11-10-2018 IX88_17125 aba43f36e67349d9b6fc6f5826ed1bea 411 SUPERFAMILY SSF53686 10 360 1.18E-93 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IX88_17125 aba43f36e67349d9b6fc6f5826ed1bea 411 Gene3D G3DSA:3.40.50.1100 59 155 8.3E-115 T 11-10-2018 IX88_17125 aba43f36e67349d9b6fc6f5826ed1bea 411 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 311 4.1E-77 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme IX88_17125 aba43f36e67349d9b6fc6f5826ed1bea 411 Gene3D G3DSA:3.40.50.1100 16 316 8.3E-115 T 11-10-2018 IX88_17125 aba43f36e67349d9b6fc6f5826ed1bea 411 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 30 407 9.4E-135 T 11-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 IX88_17545 a243c132374fcf89e69ca24f5c658f57 170 Gene3D G3DSA:3.50.100.10 57 155 1.1E-37 T 11-10-2018 IX88_17545 a243c132374fcf89e69ca24f5c658f57 170 Gene3D G3DSA:3.10.20.10 4 56 1.1E-37 T 11-10-2018 IX88_17545 a243c132374fcf89e69ca24f5c658f57 170 Pfam PF07566 Domain of Unknown Function (DUF1543) 16 70 2.0E-19 T 11-10-2018 IPR011440 Domain of unknown function DUF1543 IX88_07530 63abb90d3c5247e57465638282159834 87 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 4.5E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07530 63abb90d3c5247e57465638282159834 87 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 4.5E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07530 63abb90d3c5247e57465638282159834 87 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 4.5E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07530 63abb90d3c5247e57465638282159834 87 Pfam PF13411 MerR HTH family regulatory protein 4 69 1.4E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07530 63abb90d3c5247e57465638282159834 87 SUPERFAMILY SSF46955 4 71 2.01E-12 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily IX88_07530 63abb90d3c5247e57465638282159834 87 Gene3D G3DSA:1.10.1660.10 6 87 2.9E-11 T 11-10-2018 IX88_07530 63abb90d3c5247e57465638282159834 87 TIGRFAM TIGR02054 MerD: mercuric resistence transcriptional repressor protein MerD 1 74 2.7E-40 T 11-10-2018 IPR011797 Mercuric resistence transcriptional repressor protein MerD GO:0003677|GO:0045892|GO:0046689 IX88_07530 63abb90d3c5247e57465638282159834 87 SMART SM00422 4 73 1.6E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_10095 94ba72ee0b3b30658dd6ec86f643e8ef 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 7.9E-36 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IX88_10095 94ba72ee0b3b30658dd6ec86f643e8ef 90 Gene3D G3DSA:4.10.520.10 1 90 5.4E-39 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IX88_10095 94ba72ee0b3b30658dd6ec86f643e8ef 90 SMART SM00411 1 90 1.3E-47 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IX88_10095 94ba72ee0b3b30658dd6ec86f643e8ef 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 IX88_10095 94ba72ee0b3b30658dd6ec86f643e8ef 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.3E-20 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IX88_10095 94ba72ee0b3b30658dd6ec86f643e8ef 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.3E-20 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IX88_10095 94ba72ee0b3b30658dd6ec86f643e8ef 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.3E-20 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 IX88_10095 94ba72ee0b3b30658dd6ec86f643e8ef 90 SUPERFAMILY SSF47729 1 89 2.06E-34 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 IX88_16000 290379ba9c0d09efe9911f0f321a66a9 187 SUPERFAMILY SSF103088 70 177 4.97E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily IX88_16000 290379ba9c0d09efe9911f0f321a66a9 187 ProSitePatterns PS01068 OmpA-like domain. 111 155 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 IX88_16000 290379ba9c0d09efe9911f0f321a66a9 187 Gene3D G3DSA:3.30.1330.60 67 180 2.5E-42 T 11-10-2018 IPR036737 OmpA-like domain superfamily IX88_16000 290379ba9c0d09efe9911f0f321a66a9 187 PRINTS PR01021 OMPA domain signature 109 124 2.4E-18 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_16000 290379ba9c0d09efe9911f0f321a66a9 187 PRINTS PR01021 OMPA domain signature 79 101 2.4E-18 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_16000 290379ba9c0d09efe9911f0f321a66a9 187 PRINTS PR01021 OMPA domain signature 124 140 2.4E-18 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_16000 290379ba9c0d09efe9911f0f321a66a9 187 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 2 179 29.776 T 11-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 IX88_16000 290379ba9c0d09efe9911f0f321a66a9 187 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 77 179 1.4E-43 T 11-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 IX88_16000 290379ba9c0d09efe9911f0f321a66a9 187 Pfam PF00691 OmpA family 79 173 1.4E-21 T 11-10-2018 IPR006665 OmpA-like domain IX88_00185 44f3eb2e28e7d687a43aec79316169a2 515 Pfam PF05872 Bacterial protein of unknown function (DUF853) 12 514 4.5E-232 T 11-10-2018 IPR033186 Helicase HerA-like C-terminal IX88_00185 44f3eb2e28e7d687a43aec79316169a2 515 SUPERFAMILY SSF52540 3 384 8.87E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_00185 44f3eb2e28e7d687a43aec79316169a2 515 Gene3D G3DSA:3.40.50.300 203 379 2.0E-21 T 11-10-2018 IX88_00185 44f3eb2e28e7d687a43aec79316169a2 515 Gene3D G3DSA:3.40.50.300 3 90 7.3E-10 T 11-10-2018 IX88_17835 17146c561dd3730db67975f1d91e2379 111 Pfam PF04273 Putative phosphatase (DUF442) 2 106 1.2E-30 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 IX88_17835 17146c561dd3730db67975f1d91e2379 111 Gene3D G3DSA:3.90.190.10 1 110 2.1E-30 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like IX88_17835 17146c561dd3730db67975f1d91e2379 111 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 3 105 2.6E-27 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 IX88_11520 2fb9d97b8757ba85ab94ad5579edfdd8 418 Gene3D G3DSA:2.40.160.10 28 418 8.8E-141 T 11-10-2018 IPR023614 Porin domain superfamily IX88_11520 2fb9d97b8757ba85ab94ad5579edfdd8 418 Pfam PF03573 outer membrane porin, OprD family 36 417 6.0E-73 T 11-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 IX88_01285 33c9d3536a9b53e3478b597d8548c1f2 110 Pfam PF04341 Protein of unknown function, DUF485 11 96 2.4E-30 T 11-10-2018 IPR007436 Protein of unknown function DUF485 IX88_18065 4a35ad5f79277f78038101e15c8b0b3a 81 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 1.2E-26 T 11-10-2018 IPR021250 Protein of unknown function DUF2789 IX88_18065 4a35ad5f79277f78038101e15c8b0b3a 81 Gene3D G3DSA:1.10.10.1130 1 79 4.4E-28 T 11-10-2018 IX88_16170 3491c2b9f8435dcc17812ac55a842f98 308 Pfam PF00589 Phage integrase family 131 290 3.5E-42 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 IX88_16170 3491c2b9f8435dcc17812ac55a842f98 308 Gene3D G3DSA:1.10.150.130 8 111 5.1E-22 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal IX88_16170 3491c2b9f8435dcc17812ac55a842f98 308 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 21 91 9.3E-15 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 IX88_16170 3491c2b9f8435dcc17812ac55a842f98 308 Gene3D G3DSA:1.10.443.10 116 299 2.7E-57 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 IX88_16170 3491c2b9f8435dcc17812ac55a842f98 308 SUPERFAMILY SSF56349 11 299 1.97E-55 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 IX88_16170 3491c2b9f8435dcc17812ac55a842f98 308 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 305 51.758 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD IX88_17465 cfc266c9f1b5fcd3d8b2be7bcf12ce0a 139 Gene3D G3DSA:3.40.630.30 8 138 5.4E-39 T 11-10-2018 IX88_17465 cfc266c9f1b5fcd3d8b2be7bcf12ce0a 139 Pfam PF13673 Acetyltransferase (GNAT) domain 30 137 1.5E-21 T 11-10-2018 IPR000182 GNAT domain IX88_17465 cfc266c9f1b5fcd3d8b2be7bcf12ce0a 139 SUPERFAMILY SSF55729 2 138 7.2E-37 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 56 74 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 Gene3D G3DSA:3.20.20.10 33 274 1.3E-145 T 11-10-2018 IPR029066 PLP-binding barrel IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 411 40.218 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 411 8.4E-160 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 SUPERFAMILY SSF50621 255 412 2.3E-48 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 297 315 3.0E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 3.0E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 74 91 3.0E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 163 172 3.0E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 5.6E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 189 202 5.6E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 56 74 5.6E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 76 88 5.6E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 269 288 5.6E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 29 368 6.8E-22 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 SUPERFAMILY SSF51419 25 281 5.63E-81 T 11-10-2018 IPR029066 PLP-binding barrel IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 279 1.6E-73 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 Gene3D G3DSA:2.40.37.10 16 407 1.3E-145 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 IX88_16185 671349f5db4f823f5b64e668c7b92cde 416 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 227 240 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site IX88_03495 bd78ac171044f63a94c3ab63b9001ff8 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 9.7E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_03495 bd78ac171044f63a94c3ab63b9001ff8 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 9.7E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_03495 bd78ac171044f63a94c3ab63b9001ff8 193 SUPERFAMILY SSF48498 78 186 1.08E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_03495 bd78ac171044f63a94c3ab63b9001ff8 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 55 5.0E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_03495 bd78ac171044f63a94c3ab63b9001ff8 193 Gene3D G3DSA:1.10.357.10 2 192 1.2E-47 T 11-10-2018 IX88_03495 bd78ac171044f63a94c3ab63b9001ff8 193 SUPERFAMILY SSF46689 4 75 6.67E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_08835 4885978cdbb549babee952e816c2998a 428 SUPERFAMILY SSF56935 84 418 2.88E-28 T 11-10-2018 IX88_08835 4885978cdbb549babee952e816c2998a 428 Gene3D G3DSA:2.40.160.10 216 428 4.3E-8 T 11-10-2018 IPR023614 Porin domain superfamily IX88_15795 8a1eaec365a4d8a9c692e09f171e7e81 342 Pfam PF01926 50S ribosome-binding GTPase 42 156 2.6E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_15795 8a1eaec365a4d8a9c692e09f171e7e81 342 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 40 202 7.8E-33 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 IX88_15795 8a1eaec365a4d8a9c692e09f171e7e81 342 SUPERFAMILY SSF54814 214 340 4.36E-38 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 IX88_15795 8a1eaec365a4d8a9c692e09f171e7e81 342 TIGRFAM TIGR00436 era: GTP-binding protein Era 40 322 1.1E-94 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_15795 8a1eaec365a4d8a9c692e09f171e7e81 342 Hamap MF_00367 GTPase Era [era]. 37 339 36.049 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_15795 8a1eaec365a4d8a9c692e09f171e7e81 342 Pfam PF07650 KH domain 263 327 5.9E-15 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_15795 8a1eaec365a4d8a9c692e09f171e7e81 342 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 42 62 2.5E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_15795 8a1eaec365a4d8a9c692e09f171e7e81 342 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 110 128 2.5E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 IX88_15795 8a1eaec365a4d8a9c692e09f171e7e81 342 Gene3D G3DSA:3.40.50.300 36 214 4.5E-50 T 11-10-2018 IX88_15795 8a1eaec365a4d8a9c692e09f171e7e81 342 SUPERFAMILY SSF52540 42 236 9.88E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_15795 8a1eaec365a4d8a9c692e09f171e7e81 342 Gene3D G3DSA:3.30.300.20 217 341 4.7E-41 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta IX88_02750 e5a246b38837427d71e2a14471468d5d 233 Pfam PF06210 Protein of unknown function (DUF1003) 116 215 5.6E-41 T 11-10-2018 IPR010406 Protein of unknown function DUF1003 IX88_08060 77344943745bc5bf7cc19b448fa49668 238 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 59 237 4.4E-53 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 IX88_08060 77344943745bc5bf7cc19b448fa49668 238 Gene3D G3DSA:3.40.50.150 34 238 2.7E-57 T 11-10-2018 IX88_08060 77344943745bc5bf7cc19b448fa49668 238 Pfam PF02390 Putative methyltransferase 64 230 5.0E-51 T 11-10-2018 IX88_08060 77344943745bc5bf7cc19b448fa49668 238 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 26 237 28.855 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 IX88_08060 77344943745bc5bf7cc19b448fa49668 238 SUPERFAMILY SSF53335 45 235 6.17E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_09230 77ce54a7846cf70a44cd307e763425fb 344 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 6 334 4.2E-130 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 IX88_09230 77ce54a7846cf70a44cd307e763425fb 344 PIRSF PIRSF005508 1 344 1.1E-133 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 IX88_09230 77ce54a7846cf70a44cd307e763425fb 344 Pfam PF01758 Sodium Bile acid symporter family 51 247 2.2E-62 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 IX88_09230 77ce54a7846cf70a44cd307e763425fb 344 Gene3D G3DSA:1.20.1530.20 2 340 6.4E-25 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily IX88_00270 95c8576b0c77f6fb0095106655ae5065 226 Pfam PF02470 MlaD protein 38 164 4.9E-33 T 11-10-2018 IPR003399 Mce/MlaD IX88_15770 8c64c646fe2c22bfff8331860ff9bf24 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.8E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_15770 8c64c646fe2c22bfff8331860ff9bf24 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.8E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_15770 8c64c646fe2c22bfff8331860ff9bf24 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.8E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_15770 8c64c646fe2c22bfff8331860ff9bf24 252 SUPERFAMILY SSF51735 3 233 1.95E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_15770 8c64c646fe2c22bfff8331860ff9bf24 252 Pfam PF00106 short chain dehydrogenase 3 187 6.1E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_15770 8c64c646fe2c22bfff8331860ff9bf24 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_15770 8c64c646fe2c22bfff8331860ff9bf24 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.6E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_15770 8c64c646fe2c22bfff8331860ff9bf24 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 2.6E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_15770 8c64c646fe2c22bfff8331860ff9bf24 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.6E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_15770 8c64c646fe2c22bfff8331860ff9bf24 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.6E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_15770 8c64c646fe2c22bfff8331860ff9bf24 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.6E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_15770 8c64c646fe2c22bfff8331860ff9bf24 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.6E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_15770 8c64c646fe2c22bfff8331860ff9bf24 252 Gene3D G3DSA:3.40.50.720 2 238 1.1E-61 T 11-10-2018 IX88_10345 133f3653a29b40c7ae98f8a68dd6a633 124 Gene3D G3DSA:3.30.1150.10 27 122 2.5E-18 T 11-10-2018 IX88_10345 133f3653a29b40c7ae98f8a68dd6a633 124 Pfam PF13103 TonB C terminal 38 118 1.4E-7 T 11-10-2018 IX88_10345 133f3653a29b40c7ae98f8a68dd6a633 124 SUPERFAMILY SSF74653 30 123 3.73E-9 T 11-10-2018 IX88_14520 8da0a5f98f3757e8036be348cea3580f 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 IX88_14520 8da0a5f98f3757e8036be348cea3580f 417 SUPERFAMILY SSF53383 4 415 1.65E-184 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_14520 8da0a5f98f3757e8036be348cea3580f 417 Pfam PF00464 Serine hydroxymethyltransferase 7 385 4.9E-183 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 IX88_14520 8da0a5f98f3757e8036be348cea3580f 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 6 416 53.339 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 IX88_14520 8da0a5f98f3757e8036be348cea3580f 417 Gene3D G3DSA:3.40.640.10 36 288 5.1E-188 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_14520 8da0a5f98f3757e8036be348cea3580f 417 PIRSF PIRSF000412 2 417 1.1E-169 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 IX88_14520 8da0a5f98f3757e8036be348cea3580f 417 Gene3D G3DSA:3.90.1150.10 9 394 5.1E-188 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_15775 0b23edf651f02277e2ae47fcb4497896 214 SUPERFAMILY SSF47240 10 213 1.33E-71 T 11-10-2018 IPR009078 Ferritin-like superfamily IX88_15775 0b23edf651f02277e2ae47fcb4497896 214 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 9 59 2.3E-16 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 IX88_15775 0b23edf651f02277e2ae47fcb4497896 214 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 62 210 4.1E-48 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 IX88_15775 0b23edf651f02277e2ae47fcb4497896 214 Gene3D G3DSA:1.20.1260.10 6 214 2.3E-73 T 11-10-2018 IPR012347 Ferritin-like IX88_15775 0b23edf651f02277e2ae47fcb4497896 214 PIRSF PIRSF020736 1 214 3.3E-87 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 IX88_11180 f2532e60e6ba5aa5702af0fd8831dc4d 525 SUPERFAMILY SSF103473 11 505 2.49E-30 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_11180 f2532e60e6ba5aa5702af0fd8831dc4d 525 Pfam PF07690 Major Facilitator Superfamily 13 408 8.2E-18 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_07295 148cfa6ac0089a668f364a3d65c00487 287 SUPERFAMILY SSF53474 29 283 8.04E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_07295 148cfa6ac0089a668f364a3d65c00487 287 Pfam PF07859 alpha/beta hydrolase fold 71 151 7.6E-15 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 IX88_07295 148cfa6ac0089a668f364a3d65c00487 287 Gene3D G3DSA:3.40.50.1820 12 274 3.1E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_01065 58fd3d3aa1c2d08dd4e199a734ec16bf 111 Pfam PF01638 HxlR-like helix-turn-helix 22 110 8.8E-29 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type IX88_01065 58fd3d3aa1c2d08dd4e199a734ec16bf 111 Gene3D G3DSA:1.10.10.10 5 111 5.4E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_01065 58fd3d3aa1c2d08dd4e199a734ec16bf 111 SUPERFAMILY SSF46785 13 109 2.96E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_11785 0a1d6fa720149f42ee6723abb400056f 334 Gene3D G3DSA:3.30.1110.10 14 133 2.9E-81 T 11-10-2018 IX88_11785 0a1d6fa720149f42ee6723abb400056f 334 Gene3D G3DSA:3.40.1190.20 7 314 2.9E-81 T 11-10-2018 IPR029056 Ribokinase-like IX88_11785 0a1d6fa720149f42ee6723abb400056f 334 Pfam PF00294 pfkB family carbohydrate kinase 47 317 8.5E-55 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB IX88_11785 0a1d6fa720149f42ee6723abb400056f 334 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 62 86 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 IX88_11785 0a1d6fa720149f42ee6723abb400056f 334 SUPERFAMILY SSF53613 2 319 3.9E-77 T 11-10-2018 IPR029056 Ribokinase-like IX88_11785 0a1d6fa720149f42ee6723abb400056f 334 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 273 286 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 IX88_01855 92edeb414d5bab2ad4de421762d531c0 435 Gene3D G3DSA:2.30.30.230 1 119 2.2E-39 T 11-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 IX88_01855 92edeb414d5bab2ad4de421762d531c0 435 Pfam PF09298 Fumarylacetoacetase N-terminal 20 122 3.0E-31 T 11-10-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 IX88_01855 92edeb414d5bab2ad4de421762d531c0 435 SUPERFAMILY SSF63433 7 122 5.49E-36 T 11-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 IX88_01855 92edeb414d5bab2ad4de421762d531c0 435 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 128 416 1.1E-56 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 IX88_01855 92edeb414d5bab2ad4de421762d531c0 435 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 7 420 8.0E-177 T 11-10-2018 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 IX88_01855 92edeb414d5bab2ad4de421762d531c0 435 Gene3D G3DSA:3.90.850.10 120 421 6.6E-128 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 IX88_01855 92edeb414d5bab2ad4de421762d531c0 435 SUPERFAMILY SSF56529 124 419 4.45E-103 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 IX88_01125 94b20000040f9a75e3d202ff79f85cf5 306 SUPERFAMILY SSF46785 1 86 4.09E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_01125 94b20000040f9a75e3d202ff79f85cf5 306 Gene3D G3DSA:1.10.10.10 1 90 1.1E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_01125 94b20000040f9a75e3d202ff79f85cf5 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.0E-25 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_01125 94b20000040f9a75e3d202ff79f85cf5 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.6E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_01125 94b20000040f9a75e3d202ff79f85cf5 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.6E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_01125 94b20000040f9a75e3d202ff79f85cf5 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.6E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_01125 94b20000040f9a75e3d202ff79f85cf5 306 SUPERFAMILY SSF53850 88 292 5.43E-30 T 11-10-2018 IX88_01125 94b20000040f9a75e3d202ff79f85cf5 306 Pfam PF03466 LysR substrate binding domain 87 283 3.8E-34 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_01125 94b20000040f9a75e3d202ff79f85cf5 306 Gene3D G3DSA:3.40.190.10 91 288 2.4E-52 T 11-10-2018 IX88_01125 94b20000040f9a75e3d202ff79f85cf5 306 Gene3D G3DSA:3.40.190.10 164 271 2.4E-52 T 11-10-2018 IX88_13420 3181b8c87b9b39a606a31dce244adfcc 481 SUPERFAMILY SSF52540 210 461 1.89E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_13420 3181b8c87b9b39a606a31dce244adfcc 481 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 31 470 1.9E-164 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 IX88_13420 3181b8c87b9b39a606a31dce244adfcc 481 Gene3D G3DSA:3.40.50.300 189 475 6.2E-103 T 11-10-2018 IX88_13420 3181b8c87b9b39a606a31dce244adfcc 481 Pfam PF00772 DnaB-like helicase N terminal domain 31 133 1.2E-28 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 IX88_13420 3181b8c87b9b39a606a31dce244adfcc 481 Pfam PF03796 DnaB-like helicase C terminal domain 212 468 6.9E-109 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 IX88_13420 3181b8c87b9b39a606a31dce244adfcc 481 Gene3D G3DSA:1.10.860.10 23 187 2.7E-43 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal IX88_13420 3181b8c87b9b39a606a31dce244adfcc 481 SUPERFAMILY SSF48024 29 141 8.11E-30 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 IX88_17605 f0a2fd665d3885396aa00f72f71dfc45 600 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 42 158 1.4E-15 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_17605 f0a2fd665d3885396aa00f72f71dfc45 600 SUPERFAMILY SSF56645 41 280 2.09E-59 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_17605 f0a2fd665d3885396aa00f72f71dfc45 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 273 8.4E-18 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_17605 f0a2fd665d3885396aa00f72f71dfc45 600 Gene3D G3DSA:2.40.110.10 162 288 6.5E-29 T 11-10-2018 IX88_17605 f0a2fd665d3885396aa00f72f71dfc45 600 Gene3D G3DSA:1.20.140.10 289 498 6.6E-41 T 11-10-2018 IX88_17605 f0a2fd665d3885396aa00f72f71dfc45 600 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 594 2.3E-37 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain IX88_17605 f0a2fd665d3885396aa00f72f71dfc45 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 7.1E-19 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_17605 f0a2fd665d3885396aa00f72f71dfc45 600 SUPERFAMILY SSF47203 288 476 2.26E-46 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_17605 f0a2fd665d3885396aa00f72f71dfc45 600 Gene3D G3DSA:1.10.540.10 30 160 3.8E-19 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_17605 f0a2fd665d3885396aa00f72f71dfc45 600 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 32 1.5E-13 T 11-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria IX88_17730 0db4fe41f4d8ccc8fb5ef62eba6becc2 345 Pfam PF02547 Queuosine biosynthesis protein 3 340 1.0E-125 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 IX88_17730 0db4fe41f4d8ccc8fb5ef62eba6becc2 345 SUPERFAMILY SSF111337 1 340 9.68E-128 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 IX88_17730 0db4fe41f4d8ccc8fb5ef62eba6becc2 345 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 340 2.9E-135 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 IX88_17730 0db4fe41f4d8ccc8fb5ef62eba6becc2 345 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 44.927 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 IX88_17730 0db4fe41f4d8ccc8fb5ef62eba6becc2 345 Gene3D G3DSA:3.40.1780.10 14 340 8.0E-115 T 11-10-2018 IX88_17730 0db4fe41f4d8ccc8fb5ef62eba6becc2 345 Gene3D G3DSA:2.40.10.240 63 159 8.0E-115 T 11-10-2018 IX88_09830 90b0167dd5889ecec4b558c9dfe4738b 184 SUPERFAMILY SSF54523 13 84 3.92E-8 T 11-10-2018 IX88_09830 90b0167dd5889ecec4b558c9dfe4738b 184 PRINTS PR00885 Bacterial general secretion pathway protein H signature 8 22 1.3E-8 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 IX88_09830 90b0167dd5889ecec4b558c9dfe4738b 184 PRINTS PR00885 Bacterial general secretion pathway protein H signature 145 160 1.3E-8 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 IX88_09830 90b0167dd5889ecec4b558c9dfe4738b 184 PRINTS PR00885 Bacterial general secretion pathway protein H signature 23 37 1.3E-8 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 IX88_09830 90b0167dd5889ecec4b558c9dfe4738b 184 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 5.5E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_09830 90b0167dd5889ecec4b558c9dfe4738b 184 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_09830 90b0167dd5889ecec4b558c9dfe4738b 184 Gene3D G3DSA:3.30.700.10 13 68 1.3E-6 T 11-10-2018 IX88_09830 90b0167dd5889ecec4b558c9dfe4738b 184 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 32 1.5E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_00195 fff2b698a1af891a3645956537c675e0 145 Pfam PF02082 Transcriptional regulator 1 81 6.2E-19 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type IX88_00195 fff2b698a1af891a3645956537c675e0 145 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 4.4E-25 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type IX88_00195 fff2b698a1af891a3645956537c675e0 145 SUPERFAMILY SSF46785 2 131 2.98E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_00195 fff2b698a1af891a3645956537c675e0 145 Gene3D G3DSA:1.10.10.10 1 143 8.5E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_02610 6eeeac00e53f97f27f992066fd258390 455 Pfam PF14296 O-antigen polysaccharide polymerase Wzy 15 450 1.6E-24 T 11-10-2018 IPR029468 O-antigen polysaccharide polymerase Wzy IX88_13930 86b089e1f31d6d75713bb043b38b0858 195 Pfam PF02674 Colicin V production protein 4 142 2.4E-26 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 IX88_08750 a0c5caf38ca24024f6d5cc6d8c85aede 222 Gene3D G3DSA:3.40.1080.10 1 221 1.8E-78 T 11-10-2018 IX88_08750 a0c5caf38ca24024f6d5cc6d8c85aede 222 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 221 7.8E-117 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 IX88_08750 a0c5caf38ca24024f6d5cc6d8c85aede 222 SUPERFAMILY SSF100950 2 220 5.23E-77 T 11-10-2018 IPR037171 NagB/RpiA transferase-like IX88_08750 a0c5caf38ca24024f6d5cc6d8c85aede 222 Pfam PF01144 Coenzyme A transferase 14 218 6.2E-67 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 IX88_08750 a0c5caf38ca24024f6d5cc6d8c85aede 222 SMART SM00882 6 219 1.9E-73 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 IX88_11155 e76962e368ca24848c5ae9903f660c2f 311 Gene3D G3DSA:3.40.190.10 114 298 7.2E-36 T 11-10-2018 IX88_11155 e76962e368ca24848c5ae9903f660c2f 311 SUPERFAMILY SSF53850 103 309 2.81E-35 T 11-10-2018 IX88_11155 e76962e368ca24848c5ae9903f660c2f 311 Gene3D G3DSA:3.40.190.10 177 280 7.2E-36 T 11-10-2018 IX88_11155 e76962e368ca24848c5ae9903f660c2f 311 Pfam PF03466 LysR substrate binding domain 103 307 5.2E-31 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_11155 e76962e368ca24848c5ae9903f660c2f 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 74 7.0E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_11155 e76962e368ca24848c5ae9903f660c2f 311 Gene3D G3DSA:1.10.10.10 12 98 2.7E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_11155 e76962e368ca24848c5ae9903f660c2f 311 SUPERFAMILY SSF46785 11 120 1.13E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_11155 e76962e368ca24848c5ae9903f660c2f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 6.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_11155 e76962e368ca24848c5ae9903f660c2f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 6.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_11155 e76962e368ca24848c5ae9903f660c2f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 6.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_14765 6ba8d9f4069e9d42df7f61ff148a7661 398 Pfam PF13356 Arm DNA-binding domain 2 86 2.0E-18 T 11-10-2018 IPR025166 Integrase, DNA-binding domain IX88_14765 6ba8d9f4069e9d42df7f61ff148a7661 398 Gene3D G3DSA:1.10.443.10 216 388 1.0E-20 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 IX88_14765 6ba8d9f4069e9d42df7f61ff148a7661 398 Gene3D G3DSA:3.30.160.390 1 104 1.4E-32 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily IX88_14765 6ba8d9f4069e9d42df7f61ff148a7661 398 SUPERFAMILY SSF56349 101 387 5.3E-51 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 IX88_14765 6ba8d9f4069e9d42df7f61ff148a7661 398 Pfam PF00589 Phage integrase family 218 377 1.1E-20 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 IX88_14765 6ba8d9f4069e9d42df7f61ff148a7661 398 Gene3D G3DSA:1.10.150.130 105 190 3.5E-14 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal IX88_10410 db2bd1d1b469e9e299e9cdf8966997e6 283 SMART SM00382 30 188 5.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_10410 db2bd1d1b469e9e299e9cdf8966997e6 283 SUPERFAMILY SSF52540 16 259 6.79E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_10410 db2bd1d1b469e9e299e9cdf8966997e6 283 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 34 181 6.2E-14 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 IX88_10410 db2bd1d1b469e9e299e9cdf8966997e6 283 Gene3D G3DSA:3.40.50.300 7 213 1.6E-27 T 11-10-2018 IX88_11105 c82e1b3ee7140d7180c52c980de51a1d 254 Pfam PF00005 ABC transporter 17 164 4.1E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_11105 c82e1b3ee7140d7180c52c980de51a1d 254 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_11105 c82e1b3ee7140d7180c52c980de51a1d 254 SUPERFAMILY SSF52540 2 215 3.38E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_11105 c82e1b3ee7140d7180c52c980de51a1d 254 SMART SM00382 26 212 5.8E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_11105 c82e1b3ee7140d7180c52c980de51a1d 254 Gene3D G3DSA:3.40.50.300 1 248 5.1E-63 T 11-10-2018 IX88_14565 1616369e093813b486346ee2c4cc337c 380 Pfam PF01098 Cell cycle protein 37 379 6.5E-103 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_14565 1616369e093813b486346ee2c4cc337c 380 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 33 380 1.6E-126 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_14565 1616369e093813b486346ee2c4cc337c 380 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 27 380 26.98 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_14565 1616369e093813b486346ee2c4cc337c 380 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 338 362 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_11645 c9ca221d0673afaa9801b95c5c34816d 129 Pfam PF04977 Septum formation initiator 20 97 2.2E-23 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC IX88_11645 c9ca221d0673afaa9801b95c5c34816d 129 Hamap MF_00599 Cell division protein FtsB [ftsB]. 11 99 27.581 T 11-10-2018 IPR023081 Cell division protein FtsB IX88_06240 4ab21d4cbb9f4d1a4c34ee8b0cf3d044 548 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 16 500 4.1E-109 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 IX88_06240 4ab21d4cbb9f4d1a4c34ee8b0cf3d044 548 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 501 2.1E-132 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 IX88_14975 8030ba726aaea4b9bf8173e45c61be6b 256 SMART SM00382 105 240 4.8E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_14975 8030ba726aaea4b9bf8173e45c61be6b 256 SUPERFAMILY SSF52540 75 234 4.51E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_14975 8030ba726aaea4b9bf8173e45c61be6b 256 Pfam PF01695 IstB-like ATP binding protein 83 221 5.0E-23 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 IX88_14975 8030ba726aaea4b9bf8173e45c61be6b 256 Gene3D G3DSA:3.40.50.300 58 237 5.6E-39 T 11-10-2018 IX88_06215 f8857aabee6b6213440e568d009bd628 87 SUPERFAMILY SSF54862 4 76 1.71E-19 T 11-10-2018 IX88_06215 f8857aabee6b6213440e568d009bd628 87 Pfam PF00037 4Fe-4S binding domain 5 24 1.9E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IX88_06215 f8857aabee6b6213440e568d009bd628 87 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IX88_06215 f8857aabee6b6213440e568d009bd628 87 Gene3D G3DSA:3.30.70.20 2 81 7.8E-32 T 11-10-2018 IX88_17160 ada6d48d36d973e5d9e9fe67f5a9304f 724 Pfam PF12805 FUSC-like inner membrane protein yccS 68 349 5.8E-87 T 11-10-2018 IPR032692 Integral membrane protein YccS, N-terminal IX88_17160 ada6d48d36d973e5d9e9fe67f5a9304f 724 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 708 2.7E-228 T 11-10-2018 IPR010020 Integral membrane protein, YccS/YhfK IX88_17160 ada6d48d36d973e5d9e9fe67f5a9304f 724 Pfam PF13515 Fusaric acid resistance protein-like 411 530 5.6E-20 T 11-10-2018 IX88_17160 ada6d48d36d973e5d9e9fe67f5a9304f 724 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 12 708 1.9E-246 T 11-10-2018 IPR010019 Integral membrane protein, YccS IX88_07510 41768d8bf7685e8d2fb4ca35fcfc8096 116 Pfam PF02411 MerT mercuric transport protein 1 116 8.7E-65 T 11-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 IX88_16570 e099573a49f10506aaa9da4638482b3b 283 Gene3D G3DSA:3.20.20.20 2 283 1.6E-110 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_16570 e099573a49f10506aaa9da4638482b3b 283 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 25 280 1.9E-95 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 IX88_16570 e099573a49f10506aaa9da4638482b3b 283 SUPERFAMILY SSF51717 11 282 5.1E-98 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_16570 e099573a49f10506aaa9da4638482b3b 283 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 25 40 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_16570 e099573a49f10506aaa9da4638482b3b 283 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 59 72 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_16570 e099573a49f10506aaa9da4638482b3b 283 Pfam PF00809 Pterin binding enzyme 26 265 5.0E-81 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_00775 e98ca2806a2225534caea035e950768d 110 Hamap MF_00910 Cell division protein FtsL [ftsL]. 17 100 13.629 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 IX88_00775 e98ca2806a2225534caea035e950768d 110 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 19 100 6.6E-12 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 IX88_00775 e98ca2806a2225534caea035e950768d 110 Pfam PF04999 Cell division protein FtsL 16 101 2.3E-26 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 IX88_01955 076138bc3bebba471b1749016aa16043 344 Pfam PF14815 NUDIX domain 233 340 1.9E-20 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 IX88_01955 076138bc3bebba471b1749016aa16043 344 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 IX88_01955 076138bc3bebba471b1749016aa16043 344 SUPERFAMILY SSF48150 6 223 1.57E-73 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 IX88_01955 076138bc3bebba471b1749016aa16043 344 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 167 4.7E-18 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 IX88_01955 076138bc3bebba471b1749016aa16043 344 SMART SM00525 189 209 1.1E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 IX88_01955 076138bc3bebba471b1749016aa16043 344 Gene3D G3DSA:1.10.1670.10 9 209 4.4E-84 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 IX88_01955 076138bc3bebba471b1749016aa16043 344 SMART SM00478 39 188 3.8E-40 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 IX88_01955 076138bc3bebba471b1749016aa16043 344 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 273 3.4E-108 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 IX88_01955 076138bc3bebba471b1749016aa16043 344 Gene3D G3DSA:3.90.79.10 223 344 3.7E-14 T 11-10-2018 IX88_01955 076138bc3bebba471b1749016aa16043 344 ProSitePatterns PS01155 Endonuclease III family signature. 100 127 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 IX88_01955 076138bc3bebba471b1749016aa16043 344 Gene3D G3DSA:1.10.340.30 21 130 4.4E-84 T 11-10-2018 IX88_01955 076138bc3bebba471b1749016aa16043 344 SUPERFAMILY SSF55811 218 340 1.62E-19 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 IX88_01955 076138bc3bebba471b1749016aa16043 344 Pfam PF00633 Helix-hairpin-helix motif 99 125 7.4E-7 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 IX88_02875 c368d8191f3b841a67c95fe994b90a04 86 Pfam PF00550 Phosphopantetheine attachment site 12 76 2.2E-16 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain IX88_02875 c368d8191f3b841a67c95fe994b90a04 86 SMART SM00823 Phosphopantetheine attachment site 9 80 2.6E-17 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 IX88_02875 c368d8191f3b841a67c95fe994b90a04 86 Gene3D G3DSA:1.10.1200.10 1 86 3.3E-35 T 11-10-2018 IPR036736 ACP-like superfamily IX88_02875 c368d8191f3b841a67c95fe994b90a04 86 SMART SM01294 10 76 1.5E-7 T 11-10-2018 IX88_02875 c368d8191f3b841a67c95fe994b90a04 86 SUPERFAMILY SSF47336 8 81 2.88E-19 T 11-10-2018 IPR036736 ACP-like superfamily IX88_08270 60b93050edc0cc378bbb32fea0883373 404 Gene3D G3DSA:1.20.1250.20 17 400 1.5E-37 T 11-10-2018 IX88_08270 60b93050edc0cc378bbb32fea0883373 404 Pfam PF07690 Major Facilitator Superfamily 31 250 1.8E-22 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_08270 60b93050edc0cc378bbb32fea0883373 404 SUPERFAMILY SSF103473 17 401 1.7E-48 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_14920 be470f5ebbc604ce3fd31ebbc98b69b2 300 Pfam PF13276 HTH-like domain 52 103 3.0E-19 T 11-10-2018 IPR025948 HTH-like domain IX88_14920 be470f5ebbc604ce3fd31ebbc98b69b2 300 Pfam PF00665 Integrase core domain 128 242 1.5E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 IX88_14920 be470f5ebbc604ce3fd31ebbc98b69b2 300 Gene3D G3DSA:3.30.420.10 122 273 1.1E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IX88_14920 be470f5ebbc604ce3fd31ebbc98b69b2 300 SUPERFAMILY SSF53098 122 287 1.23E-37 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_13040 f93f188b201209fae1404be486aa0a85 322 Pfam PF12146 Serine aminopeptidase, S33 46 252 1.1E-18 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 IX88_13040 f93f188b201209fae1404be486aa0a85 322 SUPERFAMILY SSF53474 19 320 2.28E-29 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_13040 f93f188b201209fae1404be486aa0a85 322 Gene3D G3DSA:3.40.50.1820 20 321 1.4E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_15085 38b3228731020271fa162f32e8f99ae0 899 Pfam PF01433 Peptidase family M1 domain 251 472 5.9E-71 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 IX88_15085 38b3228731020271fa162f32e8f99ae0 899 Gene3D G3DSA:1.25.50.20 603 898 1.3E-19 T 11-10-2018 IX88_15085 38b3228731020271fa162f32e8f99ae0 899 Gene3D G3DSA:2.60.40.1730 27 229 3.0E-48 T 11-10-2018 IX88_15085 38b3228731020271fa162f32e8f99ae0 899 SUPERFAMILY SSF55486 246 491 1.71E-73 T 11-10-2018 IX88_15085 38b3228731020271fa162f32e8f99ae0 899 SUPERFAMILY SSF63737 32 229 2.75E-43 T 11-10-2018 IX88_15085 38b3228731020271fa162f32e8f99ae0 899 Pfam PF11838 ERAP1-like C-terminal domain 562 880 9.3E-39 T 11-10-2018 IPR024571 ERAP1-like C-terminal domain IX88_15085 38b3228731020271fa162f32e8f99ae0 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 164 179 1.1E-23 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 IX88_15085 38b3228731020271fa162f32e8f99ae0 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 297 307 1.1E-23 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 IX88_15085 38b3228731020271fa162f32e8f99ae0 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 212 227 1.1E-23 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 IX88_15085 38b3228731020271fa162f32e8f99ae0 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 332 347 1.1E-23 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 IX88_15085 38b3228731020271fa162f32e8f99ae0 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 351 363 1.1E-23 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 IX88_15085 38b3228731020271fa162f32e8f99ae0 899 Gene3D G3DSA:1.10.390.60 241 505 1.6E-82 T 11-10-2018 IX88_08360 469a281a41c3ae8a8e6a39c3d58bbd0f 203 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 157 185 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 IX88_08360 469a281a41c3ae8a8e6a39c3d58bbd0f 203 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 149 183 8.2E-7 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_08360 469a281a41c3ae8a8e6a39c3d58bbd0f 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 73 105 3.5E-5 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_08360 469a281a41c3ae8a8e6a39c3d58bbd0f 203 SUPERFAMILY SSF51161 47 201 5.28E-40 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily IX88_08360 469a281a41c3ae8a8e6a39c3d58bbd0f 203 Gene3D G3DSA:2.160.10.10 38 202 1.8E-45 T 11-10-2018 IX88_16045 63ceb2c1edea25ea575a429fb92bdb32 232 Gene3D G3DSA:3.40.50.300 29 155 2.1E-22 T 11-10-2018 IX88_16045 63ceb2c1edea25ea575a429fb92bdb32 232 Pfam PF00308 Bacterial dnaA protein 31 185 1.5E-9 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA IX88_16045 63ceb2c1edea25ea575a429fb92bdb32 232 SUPERFAMILY SSF52540 34 190 2.38E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_16045 63ceb2c1edea25ea575a429fb92bdb32 232 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 3 224 5.9E-59 T 11-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 IX88_16380 dca4eba3652c2dc099dadab18b8b7615 292 Pfam PF11726 Inovirus Gp2 122 290 2.1E-18 T 11-10-2018 IX88_05420 6773828396f3522c05d292ef16903efc 556 SUPERFAMILY SSF56935 33 553 4.88E-53 T 11-10-2018 IX88_05420 6773828396f3522c05d292ef16903efc 556 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 23 555 4.8E-71 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) IX88_05420 6773828396f3522c05d292ef16903efc 556 Gene3D G3DSA:2.40.160.60 111 556 6.0E-57 T 11-10-2018 IX88_00125 e70fbba53c6ddc281f3eab06dd2f8ab1 65 Pfam PF00831 Ribosomal L29 protein 4 60 1.0E-19 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00125 e70fbba53c6ddc281f3eab06dd2f8ab1 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 4.0E-18 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00125 e70fbba53c6ddc281f3eab06dd2f8ab1 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 16.717 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00125 e70fbba53c6ddc281f3eab06dd2f8ab1 65 SUPERFAMILY SSF46561 1 63 4.45E-19 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_00125 e70fbba53c6ddc281f3eab06dd2f8ab1 65 Gene3D G3DSA:1.10.287.310 1 63 2.8E-22 T 11-10-2018 IX88_16095 d7d7146e6182753ecf3c95f2f0cd4aef 302 Pfam PF00892 EamA-like transporter family 12 137 2.7E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_16095 d7d7146e6182753ecf3c95f2f0cd4aef 302 Pfam PF00892 EamA-like transporter family 149 285 1.1E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_16095 d7d7146e6182753ecf3c95f2f0cd4aef 302 SUPERFAMILY SSF103481 40 142 4.71E-14 T 11-10-2018 IX88_16095 d7d7146e6182753ecf3c95f2f0cd4aef 302 SUPERFAMILY SSF103481 193 288 8.11E-12 T 11-10-2018 IX88_13450 a664c71f8ba71461d764a69460e988f4 335 SUPERFAMILY SSF46785 14 56 1.52E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_13450 a664c71f8ba71461d764a69460e988f4 335 Pfam PF13280 WYL domain 158 329 3.0E-24 T 11-10-2018 IPR026881 WYL domain IX88_09270 6c2d1fcd87110c38fcf803df1cf7b225 279 Gene3D G3DSA:1.10.8.590 189 276 1.1E-21 T 11-10-2018 IX88_09270 6c2d1fcd87110c38fcf803df1cf7b225 279 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 14 260 7.0E-68 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 IX88_09270 6c2d1fcd87110c38fcf803df1cf7b225 279 PIRSF PIRSF004808 11 265 2.9E-68 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 IX88_09270 6c2d1fcd87110c38fcf803df1cf7b225 279 SUPERFAMILY SSF75217 13 174 1.11E-36 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases IX88_09270 6c2d1fcd87110c38fcf803df1cf7b225 279 Pfam PF00588 SpoU rRNA Methylase family 16 166 1.4E-34 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 IX88_09270 6c2d1fcd87110c38fcf803df1cf7b225 279 Gene3D G3DSA:3.40.1280.10 12 178 7.4E-63 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IX88_01960 229d77f5d057ffc5a5931e1996639f23 178 Gene3D G3DSA:2.70.70.10 26 178 8.0E-47 T 11-10-2018 IPR011055 Duplicated hybrid motif IX88_01960 229d77f5d057ffc5a5931e1996639f23 178 SUPERFAMILY SSF51261 43 177 1.62E-33 T 11-10-2018 IPR011055 Duplicated hybrid motif IX88_01960 229d77f5d057ffc5a5931e1996639f23 178 Pfam PF01551 Peptidase family M23 72 166 2.9E-23 T 11-10-2018 IPR016047 Peptidase M23 IX88_10455 938ce4413ba65ba8e9bb3431002a4967 320 Pfam PF00676 Dehydrogenase E1 component 14 309 1.4E-84 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 IX88_10455 938ce4413ba65ba8e9bb3431002a4967 320 SUPERFAMILY SSF52518 2 319 2.76E-91 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold IX88_10455 938ce4413ba65ba8e9bb3431002a4967 320 Gene3D G3DSA:3.40.50.970 1 320 3.9E-112 T 11-10-2018 IX88_17610 523550d3709ee1dfc95db1f6d741a5ce 593 Gene3D G3DSA:2.40.110.10 161 281 3.9E-94 T 11-10-2018 IX88_17610 523550d3709ee1dfc95db1f6d741a5ce 593 Gene3D G3DSA:1.20.140.10 282 451 3.9E-94 T 11-10-2018 IX88_17610 523550d3709ee1dfc95db1f6d741a5ce 593 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 1.2E-16 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 IX88_17610 523550d3709ee1dfc95db1f6d741a5ce 593 SUPERFAMILY SSF56645 38 279 2.36E-57 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_17610 523550d3709ee1dfc95db1f6d741a5ce 593 Gene3D G3DSA:1.10.540.10 44 160 3.9E-94 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 IX88_17610 523550d3709ee1dfc95db1f6d741a5ce 593 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 33 9.4E-7 T 11-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria IX88_17610 523550d3709ee1dfc95db1f6d741a5ce 593 SUPERFAMILY SSF47203 288 474 7.73E-47 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 IX88_17610 523550d3709ee1dfc95db1f6d741a5ce 593 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 583 3.0E-24 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain IX88_17610 523550d3709ee1dfc95db1f6d741a5ce 593 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 450 3.4E-17 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 IX88_17610 523550d3709ee1dfc95db1f6d741a5ce 593 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 158 1.1E-15 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 IX88_11545 52c8691f0455d9c45db1da139207b4a4 306 Gene3D G3DSA:3.40.190.10 182 276 1.7E-31 T 11-10-2018 IX88_11545 52c8691f0455d9c45db1da139207b4a4 306 Pfam PF03466 LysR substrate binding domain 109 293 6.1E-9 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_11545 52c8691f0455d9c45db1da139207b4a4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 1.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_11545 52c8691f0455d9c45db1da139207b4a4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 1.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_11545 52c8691f0455d9c45db1da139207b4a4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 1.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_11545 52c8691f0455d9c45db1da139207b4a4 306 SUPERFAMILY SSF53850 109 304 1.68E-22 T 11-10-2018 IX88_11545 52c8691f0455d9c45db1da139207b4a4 306 Gene3D G3DSA:3.40.190.10 102 300 1.7E-31 T 11-10-2018 IX88_11545 52c8691f0455d9c45db1da139207b4a4 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 79 3.0E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_11545 52c8691f0455d9c45db1da139207b4a4 306 SUPERFAMILY SSF46785 15 97 6.22E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_11545 52c8691f0455d9c45db1da139207b4a4 306 Gene3D G3DSA:1.10.10.10 12 100 8.7E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_09705 120f48bd9baf38b50847d79bbfef74f1 400 Pfam PF00375 Sodium:dicarboxylate symporter family 10 393 2.5E-63 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 IX88_09705 120f48bd9baf38b50847d79bbfef74f1 400 SUPERFAMILY SSF118215 10 393 7.45E-89 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IX88_09705 120f48bd9baf38b50847d79bbfef74f1 400 PRINTS PR00173 Glutamate-aspartate symporter signature 283 309 1.4E-14 T 11-10-2018 IX88_09705 120f48bd9baf38b50847d79bbfef74f1 400 PRINTS PR00173 Glutamate-aspartate symporter signature 181 200 1.4E-14 T 11-10-2018 IX88_09705 120f48bd9baf38b50847d79bbfef74f1 400 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 1.4E-14 T 11-10-2018 IX88_09705 120f48bd9baf38b50847d79bbfef74f1 400 PRINTS PR00173 Glutamate-aspartate symporter signature 345 365 1.4E-14 T 11-10-2018 IX88_09705 120f48bd9baf38b50847d79bbfef74f1 400 PRINTS PR00173 Glutamate-aspartate symporter signature 318 337 1.4E-14 T 11-10-2018 IX88_09705 120f48bd9baf38b50847d79bbfef74f1 400 Gene3D G3DSA:1.10.3860.10 2 398 4.2E-71 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 IX88_09705 120f48bd9baf38b50847d79bbfef74f1 400 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 1 400 34.119 T 11-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 IX88_01335 d3f5c3813bb11f1683ad1239066d9d09 326 Gene3D G3DSA:2.30.30.60 159 207 9.5E-15 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily IX88_01335 d3f5c3813bb11f1683ad1239066d9d09 326 SUPERFAMILY SSF82689 213 310 4.05E-26 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 IX88_01335 d3f5c3813bb11f1683ad1239066d9d09 326 SUPERFAMILY SSF50182 143 205 2.84E-16 T 11-10-2018 IPR010920 LSM domain superfamily IX88_01335 d3f5c3813bb11f1683ad1239066d9d09 326 Gene3D G3DSA:3.30.70.100 210 304 1.3E-22 T 11-10-2018 IX88_01335 d3f5c3813bb11f1683ad1239066d9d09 326 SUPERFAMILY SSF82861 57 142 1.7E-8 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 IX88_01335 d3f5c3813bb11f1683ad1239066d9d09 326 Pfam PF00924 Mechanosensitive ion channel 105 300 1.1E-44 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 IX88_08945 5c523ba09c524debe80cfbd5a67372a9 94 Gene3D G3DSA:3.40.630.30 2 94 2.2E-22 T 11-10-2018 IX88_08945 5c523ba09c524debe80cfbd5a67372a9 94 Pfam PF14542 GCN5-related N-acetyl-transferase 14 90 5.4E-20 T 11-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase IX88_08945 5c523ba09c524debe80cfbd5a67372a9 94 SUPERFAMILY SSF55729 3 92 7.77E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_03285 bf0e3e50c6d75f7e1bb0f9d3141df278 132 Pfam PF01124 MAPEG family 7 129 1.2E-23 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein IX88_03285 bf0e3e50c6d75f7e1bb0f9d3141df278 132 SUPERFAMILY SSF161084 7 129 5.49E-28 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily IX88_03285 bf0e3e50c6d75f7e1bb0f9d3141df278 132 Gene3D G3DSA:1.20.120.550 4 131 2.9E-17 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily IX88_06255 b80d3677866bf758f403b0e034146bd4 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 IX88_06255 b80d3677866bf758f403b0e034146bd4 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 477 9.6E-214 T 11-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 IX88_06255 b80d3677866bf758f403b0e034146bd4 483 Gene3D G3DSA:3.40.605.10 21 474 5.1E-186 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_06255 b80d3677866bf758f403b0e034146bd4 483 Pfam PF00171 Aldehyde dehydrogenase family 20 478 9.3E-175 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_06255 b80d3677866bf758f403b0e034146bd4 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 IX88_06255 b80d3677866bf758f403b0e034146bd4 483 Gene3D G3DSA:3.40.309.10 262 451 5.1E-186 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_06255 b80d3677866bf758f403b0e034146bd4 483 SUPERFAMILY SSF53720 6 482 2.75E-174 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_04990 3c89127208fa1bcba7dff62d7a554ebe 297 Gene3D G3DSA:3.40.190.10 120 285 1.1E-35 T 11-10-2018 IX88_04990 3c89127208fa1bcba7dff62d7a554ebe 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_04990 3c89127208fa1bcba7dff62d7a554ebe 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_04990 3c89127208fa1bcba7dff62d7a554ebe 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_04990 3c89127208fa1bcba7dff62d7a554ebe 297 SUPERFAMILY SSF46785 3 86 6.91E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_04990 3c89127208fa1bcba7dff62d7a554ebe 297 Gene3D G3DSA:1.10.10.10 2 95 4.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_04990 3c89127208fa1bcba7dff62d7a554ebe 297 SUPERFAMILY SSF53850 120 293 3.8E-18 T 11-10-2018 IX88_04990 3c89127208fa1bcba7dff62d7a554ebe 297 Gene3D G3DSA:3.40.190.10 166 271 1.1E-35 T 11-10-2018 IX88_04990 3c89127208fa1bcba7dff62d7a554ebe 297 Pfam PF03466 LysR substrate binding domain 120 291 1.1E-18 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_04990 3c89127208fa1bcba7dff62d7a554ebe 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.8E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_02755 f3cfe213758ca9648d69bfab89595603 221 SUPERFAMILY SSF55120 12 220 9.76E-59 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_02755 f3cfe213758ca9648d69bfab89595603 221 Pfam PF00849 RNA pseudouridylate synthase 24 171 3.5E-28 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_02755 f3cfe213758ca9648d69bfab89595603 221 Gene3D G3DSA:3.30.2350.10 7 220 7.5E-65 T 11-10-2018 IX88_08045 e17e4e3064f563c0d716ef949894365a 471 ProSitePatterns PS01068 OmpA-like domain. 401 445 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 IX88_08045 e17e4e3064f563c0d716ef949894365a 471 PRINTS PR01021 OMPA domain signature 369 391 4.0E-11 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_08045 e17e4e3064f563c0d716ef949894365a 471 PRINTS PR01021 OMPA domain signature 399 414 4.0E-11 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_08045 e17e4e3064f563c0d716ef949894365a 471 PRINTS PR01021 OMPA domain signature 414 430 4.0E-11 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_08045 e17e4e3064f563c0d716ef949894365a 471 SUPERFAMILY SSF103088 360 468 2.22E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily IX88_08045 e17e4e3064f563c0d716ef949894365a 471 Gene3D G3DSA:3.30.1330.60 332 471 6.4E-39 T 11-10-2018 IPR036737 OmpA-like domain superfamily IX88_08045 e17e4e3064f563c0d716ef949894365a 471 Pfam PF00691 OmpA family 368 463 1.4E-22 T 11-10-2018 IPR006665 OmpA-like domain IX88_09445 01f23717891287da2445648dd55ed5a8 181 SUPERFAMILY SSF69593 26 141 1.96E-15 T 11-10-2018 IX88_09445 01f23717891287da2445648dd55ed5a8 181 SMART SM00563 29 145 1.3E-16 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 IX88_09445 01f23717891287da2445648dd55ed5a8 181 Pfam PF01553 Acyltransferase 25 138 3.8E-13 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 IX88_13870 74b336ad804ad2b5bc4cf2ddaa175504 267 Pfam PF00069 Protein kinase domain 115 255 7.4E-14 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 IX88_13870 74b336ad804ad2b5bc4cf2ddaa175504 267 SUPERFAMILY SSF56112 38 263 3.46E-22 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily IX88_13870 74b336ad804ad2b5bc4cf2ddaa175504 267 Gene3D G3DSA:1.10.510.10 109 266 2.2E-20 T 11-10-2018 IX88_13870 74b336ad804ad2b5bc4cf2ddaa175504 267 SMART SM00220 1 265 0.0063 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 IX88_00960 4311c4ce009e198c53f4c1e21b36d34d 213 Gene3D G3DSA:3.30.420.10 13 204 6.3E-40 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IX88_00960 4311c4ce009e198c53f4c1e21b36d34d 213 SUPERFAMILY SSF53098 14 196 7.7E-39 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_00960 4311c4ce009e198c53f4c1e21b36d34d 213 SMART SM00474 27 198 6.1E-13 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 IX88_00960 4311c4ce009e198c53f4c1e21b36d34d 213 Pfam PF01612 3'-5' exonuclease 28 195 1.2E-23 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 IX88_13550 3395fde0d982d5ad10ce507a6227664a 242 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 231 3.5E-72 T 11-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 IX88_13550 3395fde0d982d5ad10ce507a6227664a 242 Gene3D G3DSA:3.40.50.1860 4 223 1.1E-83 T 11-10-2018 IX88_13550 3395fde0d982d5ad10ce507a6227664a 242 SUPERFAMILY SSF53681 118 228 1.03E-34 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_13550 3395fde0d982d5ad10ce507a6227664a 242 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 1.9E-59 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_13550 3395fde0d982d5ad10ce507a6227664a 242 Gene3D G3DSA:3.40.50.1860 104 214 1.1E-83 T 11-10-2018 IX88_13550 3395fde0d982d5ad10ce507a6227664a 242 SUPERFAMILY SSF53681 1 113 1.9E-36 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_06360 31bee23b89d157a0c8174f7fb0ed8947 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 201 2.9E-58 T 11-10-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 IX88_06360 31bee23b89d157a0c8174f7fb0ed8947 206 Pfam PF01810 LysE type translocator 15 203 3.0E-48 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_06360 31bee23b89d157a0c8174f7fb0ed8947 206 PIRSF PIRSF006324 1 206 7.7E-41 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_10210 b29cecbbff8a03c9b8a34987d40c0d95 208 Pfam PF13563 2'-5' RNA ligase superfamily 49 183 3.8E-9 T 11-10-2018 IX88_10210 b29cecbbff8a03c9b8a34987d40c0d95 208 SUPERFAMILY SSF55144 29 178 6.93E-10 T 11-10-2018 IPR009097 Cyclic phosphodiesterase IX88_10210 b29cecbbff8a03c9b8a34987d40c0d95 208 Gene3D G3DSA:3.90.1140.10 19 197 1.4E-7 T 11-10-2018 IX88_09320 728c71c698d192fc4b4c94a408695643 887 Pfam PF08335 GlnD PII-uridylyltransferase 175 317 2.0E-36 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 IX88_09320 728c71c698d192fc4b4c94a408695643 887 Pfam PF01909 Nucleotidyltransferase domain 66 111 2.2E-5 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 IX88_09320 728c71c698d192fc4b4c94a408695643 887 SUPERFAMILY SSF81301 37 166 1.69E-16 T 11-10-2018 IX88_09320 728c71c698d192fc4b4c94a408695643 887 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 31 877 1.8E-266 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 IX88_09320 728c71c698d192fc4b4c94a408695643 887 SUPERFAMILY SSF109604 425 548 3.56E-13 T 11-10-2018 IX88_09320 728c71c698d192fc4b4c94a408695643 887 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 887 285.987 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 IX88_09320 728c71c698d192fc4b4c94a408695643 887 Gene3D G3DSA:1.10.3210.10 444 584 8.7E-10 T 11-10-2018 IX88_09320 728c71c698d192fc4b4c94a408695643 887 SUPERFAMILY SSF55021 809 861 3.58E-9 T 11-10-2018 IX88_09320 728c71c698d192fc4b4c94a408695643 887 Pfam PF01966 HD domain 492 586 2.7E-8 T 11-10-2018 IPR006674 HD domain IX88_09320 728c71c698d192fc4b4c94a408695643 887 SMART SM00471 453 600 2.0E-5 T 11-10-2018 IPR003607 HD/PDEase domain IX88_09320 728c71c698d192fc4b4c94a408695643 887 PIRSF PIRSF006288 10 884 0.0 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 IX88_09320 728c71c698d192fc4b4c94a408695643 887 SUPERFAMILY SSF81593 190 312 8.63E-9 T 11-10-2018 IX88_01685 41f567fa43d07de973377960c13b0b5e 277 Gene3D G3DSA:3.40.50.720 1 275 4.1E-68 T 11-10-2018 IX88_01685 41f567fa43d07de973377960c13b0b5e 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.4E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_01685 41f567fa43d07de973377960c13b0b5e 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.4E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_01685 41f567fa43d07de973377960c13b0b5e 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.4E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_01685 41f567fa43d07de973377960c13b0b5e 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.4E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_01685 41f567fa43d07de973377960c13b0b5e 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_01685 41f567fa43d07de973377960c13b0b5e 277 SUPERFAMILY SSF51735 1 271 2.46E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_01685 41f567fa43d07de973377960c13b0b5e 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.4E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_01685 41f567fa43d07de973377960c13b0b5e 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_01685 41f567fa43d07de973377960c13b0b5e 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.4E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_01685 41f567fa43d07de973377960c13b0b5e 277 Pfam PF00106 short chain dehydrogenase 7 199 7.9E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_01685 41f567fa43d07de973377960c13b0b5e 277 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_00220 04df8a6a975d7cd958325040cd49c4be 857 SMART SM00563 317 444 9.8E-26 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 IX88_00220 04df8a6a975d7cd958325040cd49c4be 857 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 23 832 23.859 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 IX88_00220 04df8a6a975d7cd958325040cd49c4be 857 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 32 823 0.0 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 IX88_00220 04df8a6a975d7cd958325040cd49c4be 857 PIRSF PIRSF500064 10 839 3.6E-236 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 IX88_00220 04df8a6a975d7cd958325040cd49c4be 857 PIRSF PIRSF000437 30 841 2.3E-231 T 11-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 IX88_00220 04df8a6a975d7cd958325040cd49c4be 857 SUPERFAMILY SSF69593 258 500 2.22E-25 T 11-10-2018 IX88_00220 04df8a6a975d7cd958325040cd49c4be 857 Pfam PF01553 Acyltransferase 300 441 1.6E-20 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 IX88_12995 19664ddcf3ac79fb745bf3c9973c8326 176 SMART SM00972 116 173 3.6E-19 T 11-10-2018 IPR007893 Spore coat protein U IX88_12995 19664ddcf3ac79fb745bf3c9973c8326 176 Pfam PF05229 Spore Coat Protein U domain 27 173 1.3E-28 T 11-10-2018 IPR007893 Spore coat protein U IX88_11590 ea4532288889661526fc404237dfe6bb 277 Gene3D G3DSA:3.20.20.70 30 274 1.4E-80 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_11590 ea4532288889661526fc404237dfe6bb 277 Pfam PF01487 Type I 3-dehydroquinase 43 269 1.5E-62 T 11-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 IX88_11590 ea4532288889661526fc404237dfe6bb 277 ProSitePatterns PS01028 Dehydroquinase class I active site. 138 168 - T 11-10-2018 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 IX88_11590 ea4532288889661526fc404237dfe6bb 277 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 40 269 2.9E-80 T 11-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 IX88_11590 ea4532288889661526fc404237dfe6bb 277 SUPERFAMILY SSF51569 37 272 1.68E-68 T 11-10-2018 IX88_11590 ea4532288889661526fc404237dfe6bb 277 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 40 272 37.9 T 11-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 IX88_13905 d8949d578f4ea19fd2d6738d35bd5a87 478 Gene3D G3DSA:3.30.2010.10 67 147 2.3E-7 T 11-10-2018 IX88_13905 d8949d578f4ea19fd2d6738d35bd5a87 478 SUPERFAMILY SSF48452 298 395 2.53E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_13905 d8949d578f4ea19fd2d6738d35bd5a87 478 Gene3D G3DSA:1.25.40.10 249 476 2.9E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_13905 d8949d578f4ea19fd2d6738d35bd5a87 478 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 7 476 35.596 T 11-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 IX88_13905 d8949d578f4ea19fd2d6738d35bd5a87 478 Pfam PF01435 Peptidase family M48 77 256 3.7E-32 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 IX88_03865 8ea9b3f707fda8cdf90d7d274f8325b7 203 Gene3D G3DSA:2.60.120.590 19 202 2.6E-57 T 11-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily IX88_03865 8ea9b3f707fda8cdf90d7d274f8325b7 203 SUPERFAMILY SSF51197 6 200 4.94E-58 T 11-10-2018 IX88_03865 8ea9b3f707fda8cdf90d7d274f8325b7 203 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 28 198 7.9E-30 T 11-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like IX88_16090 a157d5cb0fc0c82b08ea1d2d4af150d0 411 Pfam PF02687 FtsX-like permease family 298 404 2.2E-12 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 IX88_16090 a157d5cb0fc0c82b08ea1d2d4af150d0 411 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 411 1.3E-153 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 IX88_16090 a157d5cb0fc0c82b08ea1d2d4af150d0 411 Pfam PF12704 MacB-like periplasmic core domain 28 240 3.8E-15 T 11-10-2018 IPR025857 MacB-like periplasmic core domain IX88_14455 f41f27cce72932ac90f8f3c34775e266 422 Pfam PF02308 MgtC family 22 136 3.0E-15 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 IX88_14455 f41f27cce72932ac90f8f3c34775e266 422 Pfam PF13194 Domain of unknown function (DUF4010) 186 392 9.0E-27 T 11-10-2018 IPR025105 Domain of unknown function DUF4010 IX88_02455 0cf5e1b801c82852ca80f8a69e680841 391 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 1 382 79.937 T 11-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 IX88_02455 0cf5e1b801c82852ca80f8a69e680841 391 Gene3D G3DSA:3.20.20.30 1 363 3.2E-144 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 IX88_02455 0cf5e1b801c82852ca80f8a69e680841 391 SUPERFAMILY SSF51679 1 351 2.22E-96 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 IX88_02455 0cf5e1b801c82852ca80f8a69e680841 391 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 351 1.0E-190 T 11-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 IX88_02455 0cf5e1b801c82852ca80f8a69e680841 391 Pfam PF00296 Luciferase-like monooxygenase 1 327 8.5E-88 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 IX88_08650 f104148c2cebbcb3471a8bba5420de49 345 Gene3D G3DSA:3.40.190.10 141 258 1.6E-83 T 11-10-2018 IX88_08650 f104148c2cebbcb3471a8bba5420de49 345 Pfam PF13343 Bacterial extracellular solute-binding protein 85 322 7.2E-28 T 11-10-2018 IX88_08650 f104148c2cebbcb3471a8bba5420de49 345 Gene3D G3DSA:3.40.190.10 40 304 1.6E-83 T 11-10-2018 IX88_08650 f104148c2cebbcb3471a8bba5420de49 345 SUPERFAMILY SSF53850 33 341 9.57E-65 T 11-10-2018 IX88_08650 f104148c2cebbcb3471a8bba5420de49 345 PIRSF PIRSF002825 4 344 2.2E-90 T 11-10-2018 IPR026045 Ferric binding protein IX88_08650 f104148c2cebbcb3471a8bba5420de49 345 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 21 344 2.0E-142 T 11-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative IX88_05235 f14d9a08ecb9a09b588a1bacdb805a17 108 PIRSF PIRSF000077 2 108 5.0E-39 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 IX88_05235 f14d9a08ecb9a09b588a1bacdb805a17 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 6.0E-36 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 IX88_05235 f14d9a08ecb9a09b588a1bacdb805a17 108 SUPERFAMILY SSF52833 4 107 9.31E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_05235 f14d9a08ecb9a09b588a1bacdb805a17 108 Gene3D G3DSA:3.40.30.10 1 108 1.2E-34 T 11-10-2018 IX88_05235 f14d9a08ecb9a09b588a1bacdb805a17 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 IX88_05235 f14d9a08ecb9a09b588a1bacdb805a17 108 PRINTS PR00421 Thioredoxin family signature 32 41 2.4E-7 T 11-10-2018 IX88_05235 f14d9a08ecb9a09b588a1bacdb805a17 108 PRINTS PR00421 Thioredoxin family signature 72 83 2.4E-7 T 11-10-2018 IX88_05235 f14d9a08ecb9a09b588a1bacdb805a17 108 PRINTS PR00421 Thioredoxin family signature 24 32 2.4E-7 T 11-10-2018 IX88_05235 f14d9a08ecb9a09b588a1bacdb805a17 108 Pfam PF00085 Thioredoxin 5 106 2.1E-34 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 IX88_05030 234b39cc21ab84fd3238d91b21c24e62 135 Gene3D G3DSA:3.30.1330.40 7 135 1.7E-23 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 IX88_05030 234b39cc21ab84fd3238d91b21c24e62 135 SUPERFAMILY SSF55298 5 134 1.03E-23 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 IX88_05030 234b39cc21ab84fd3238d91b21c24e62 135 Pfam PF01042 Endoribonuclease L-PSP 20 134 1.2E-17 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 IX88_01010 476f36abf8f1eebaf957e2b35d12245c 334 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 51 199 3.0E-25 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal IX88_01010 476f36abf8f1eebaf957e2b35d12245c 334 SUPERFAMILY SSF46689 280 331 1.58E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_01010 476f36abf8f1eebaf957e2b35d12245c 334 Gene3D G3DSA:1.10.10.60 225 333 7.8E-23 T 11-10-2018 IX88_01010 476f36abf8f1eebaf957e2b35d12245c 334 SMART SM00342 245 327 8.4E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_01010 476f36abf8f1eebaf957e2b35d12245c 334 Pfam PF12833 Helix-turn-helix domain 251 328 1.6E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_11070 6c038734b7976b78238fd34d791a4709 464 SUPERFAMILY SSF51730 1 279 5.1E-44 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like IX88_11070 6c038734b7976b78238fd34d791a4709 464 Pfam PF12225 Methylene-tetrahydrofolate reductase C terminal 361 442 2.0E-18 T 11-10-2018 IPR022026 Methylene-tetrahydrofolate reductase C-terminal IX88_11070 6c038734b7976b78238fd34d791a4709 464 Gene3D G3DSA:3.20.20.220 29 277 1.9E-28 T 11-10-2018 IX88_11070 6c038734b7976b78238fd34d791a4709 464 Pfam PF02219 Methylenetetrahydrofolate reductase 64 262 3.2E-21 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 IX88_01365 817410024bf21252597050f479d34be1 255 Pfam PF16956 Putative general bacterial porin 1 149 7.2E-19 T 11-10-2018 IPR031593 Putative general bacterial porin IX88_01365 817410024bf21252597050f479d34be1 255 Pfam PF16956 Putative general bacterial porin 166 244 2.1E-6 T 11-10-2018 IPR031593 Putative general bacterial porin IX88_01365 817410024bf21252597050f479d34be1 255 SUPERFAMILY SSF56935 30 255 3.89E-7 T 11-10-2018 IX88_03470 6c5538610d1772e072853fe47c96ee33 178 PRINTS PR00618 DksA/TraR zinc finger signature 153 165 8.7E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria IX88_03470 6c5538610d1772e072853fe47c96ee33 178 PRINTS PR00618 DksA/TraR zinc finger signature 141 152 8.7E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria IX88_03470 6c5538610d1772e072853fe47c96ee33 178 Gene3D G3DSA:1.20.120.910 48 177 2.7E-36 T 11-10-2018 IX88_03470 6c5538610d1772e072853fe47c96ee33 178 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 59 167 6.9E-51 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 IX88_03470 6c5538610d1772e072853fe47c96ee33 178 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 141 165 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site IX88_03470 6c5538610d1772e072853fe47c96ee33 178 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 137 170 1.2E-11 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 IX88_03470 6c5538610d1772e072853fe47c96ee33 178 SUPERFAMILY SSF109635 41 136 6.8E-35 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily IX88_03470 6c5538610d1772e072853fe47c96ee33 178 SUPERFAMILY SSF57716 138 175 3.28E-10 T 11-10-2018 IX88_03470 6c5538610d1772e072853fe47c96ee33 178 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 55 177 29.143 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 IX88_08085 78cda449af79d029fb66f4a9eae0944c 72 Pfam PF07866 Protein of unknown function (DUF1653) 6 67 7.0E-29 T 11-10-2018 IPR023387 DUF1653-like domain IX88_08085 78cda449af79d029fb66f4a9eae0944c 72 Gene3D G3DSA:2.30.30.320 1 72 3.5E-29 T 11-10-2018 IPR037135 DUF1653-like domain superfamily IX88_06375 2db988b48ccbc04b2c98754e8255d64f 270 PIRSF PIRSF003092 1 270 2.1E-88 T 11-10-2018 IPR025501 ATP binding protein MinD IX88_06375 2db988b48ccbc04b2c98754e8255d64f 270 Pfam PF13614 AAA domain 3 166 7.6E-22 T 11-10-2018 IPR025669 AAA domain IX88_06375 2db988b48ccbc04b2c98754e8255d64f 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 3.3E-106 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 IX88_06375 2db988b48ccbc04b2c98754e8255d64f 270 Gene3D G3DSA:3.40.50.300 1 259 4.6E-72 T 11-10-2018 IX88_06375 2db988b48ccbc04b2c98754e8255d64f 270 SUPERFAMILY SSF52540 2 267 3.86E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_10440 0f539e6ab82cf92e35f617c804034b79 250 SUPERFAMILY SSF48613 19 242 5.04E-48 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IX88_10440 0f539e6ab82cf92e35f617c804034b79 250 Pfam PF14518 Iron-containing redox enzyme 55 233 1.5E-21 T 11-10-2018 IX88_10440 0f539e6ab82cf92e35f617c804034b79 250 Gene3D G3DSA:1.20.910.10 1 249 1.2E-79 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IX88_02080 27dcfe452996c5b77c9b291004a171d4 434 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 17 432 4.6E-113 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 IX88_02080 27dcfe452996c5b77c9b291004a171d4 434 Gene3D G3DSA:1.10.940.10 8 144 1.1E-32 T 11-10-2018 IPR035926 NusB-like superfamily IX88_02080 27dcfe452996c5b77c9b291004a171d4 434 Pfam PF01189 16S rRNA methyltransferase RsmB/F 240 430 1.6E-54 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 IX88_02080 27dcfe452996c5b77c9b291004a171d4 434 SUPERFAMILY SSF48013 12 149 1.8E-26 T 11-10-2018 IPR035926 NusB-like superfamily IX88_02080 27dcfe452996c5b77c9b291004a171d4 434 Gene3D G3DSA:3.40.50.150 231 433 6.6E-56 T 11-10-2018 IX88_02080 27dcfe452996c5b77c9b291004a171d4 434 Gene3D G3DSA:3.30.70.1170 173 230 1.0E-18 T 11-10-2018 IX88_02080 27dcfe452996c5b77c9b291004a171d4 434 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 145 233 1.1E-6 T 11-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 IX88_02080 27dcfe452996c5b77c9b291004a171d4 434 Pfam PF01029 NusB family 13 130 7.8E-16 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 IX88_02080 27dcfe452996c5b77c9b291004a171d4 434 SUPERFAMILY SSF53335 141 433 2.01E-67 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_02080 27dcfe452996c5b77c9b291004a171d4 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 4.6E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase IX88_02080 27dcfe452996c5b77c9b291004a171d4 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 4.6E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase IX88_02080 27dcfe452996c5b77c9b291004a171d4 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 4.6E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase IX88_02080 27dcfe452996c5b77c9b291004a171d4 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 415 432 4.6E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase IX88_02080 27dcfe452996c5b77c9b291004a171d4 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 4.6E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase IX88_13820 a44cb6a2a763c54ce2eac83ec5eb9e04 186 SUPERFAMILY SSF46689 13 69 4.0E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_13820 a44cb6a2a763c54ce2eac83ec5eb9e04 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.2E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_13820 a44cb6a2a763c54ce2eac83ec5eb9e04 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.2E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_13820 a44cb6a2a763c54ce2eac83ec5eb9e04 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 57 9.2E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_13820 a44cb6a2a763c54ce2eac83ec5eb9e04 186 Gene3D G3DSA:1.10.357.10 7 178 1.9E-19 T 11-10-2018 IX88_17495 777c3346c94da4d168480bb8d5d5b972 213 Pfam PF00578 AhpC/TSA family 6 135 9.0E-31 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 IX88_17495 777c3346c94da4d168480bb8d5d5b972 213 SUPERFAMILY SSF52833 3 209 6.23E-69 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_17495 777c3346c94da4d168480bb8d5d5b972 213 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 196 2.7E-13 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 IX88_17495 777c3346c94da4d168480bb8d5d5b972 213 Gene3D G3DSA:3.40.30.10 1 145 5.2E-50 T 11-10-2018 IX88_17495 777c3346c94da4d168480bb8d5d5b972 213 PIRSF PIRSF000239 1 209 1.0E-78 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 IX88_17495 777c3346c94da4d168480bb8d5d5b972 213 Gene3D G3DSA:3.30.1020.10 146 210 4.3E-28 T 11-10-2018 IX88_00995 616497c4d710cfdf5235503da7dd9395 316 Hamap MF_00301 Homoserine kinase [thrB]. 1 316 94.715 T 11-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 IX88_00995 616497c4d710cfdf5235503da7dd9395 316 Gene3D G3DSA:3.30.200.20 1 101 1.7E-19 T 11-10-2018 IX88_00995 616497c4d710cfdf5235503da7dd9395 316 SUPERFAMILY SSF56112 5 313 2.55E-54 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily IX88_00995 616497c4d710cfdf5235503da7dd9395 316 Gene3D G3DSA:3.90.1200.10 104 315 4.0E-54 T 11-10-2018 IX88_00995 616497c4d710cfdf5235503da7dd9395 316 Pfam PF01636 Phosphotransferase enzyme family 26 254 9.0E-23 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase IX88_09820 9c8000e2f81fb1ce9109f55d01d2bfc4 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 255 6.2E-86 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 IX88_09820 9c8000e2f81fb1ce9109f55d01d2bfc4 257 PIRSF PIRSF005902 1 256 1.6E-75 T 11-10-2018 IPR001130 TatD family GO:0016788 IX88_09820 9c8000e2f81fb1ce9109f55d01d2bfc4 257 Gene3D G3DSA:3.20.20.140 1 257 4.6E-88 T 11-10-2018 IX88_09820 9c8000e2f81fb1ce9109f55d01d2bfc4 257 Pfam PF01026 TatD related DNase 3 254 1.4E-74 T 11-10-2018 IPR001130 TatD family GO:0016788 IX88_09820 9c8000e2f81fb1ce9109f55d01d2bfc4 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 IX88_09820 9c8000e2f81fb1ce9109f55d01d2bfc4 257 SUPERFAMILY SSF51556 2 255 3.41E-82 T 11-10-2018 IPR032466 Metal-dependent hydrolase IX88_08730 0b3b315bf16ece1cc20b6f838fedbcfe 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 7.1E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08730 0b3b315bf16ece1cc20b6f838fedbcfe 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 7.1E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08730 0b3b315bf16ece1cc20b6f838fedbcfe 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 7.1E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08730 0b3b315bf16ece1cc20b6f838fedbcfe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 5.1E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08730 0b3b315bf16ece1cc20b6f838fedbcfe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 5.1E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08730 0b3b315bf16ece1cc20b6f838fedbcfe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 5.1E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08730 0b3b315bf16ece1cc20b6f838fedbcfe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 5.1E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08730 0b3b315bf16ece1cc20b6f838fedbcfe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.1E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08730 0b3b315bf16ece1cc20b6f838fedbcfe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 5.1E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08730 0b3b315bf16ece1cc20b6f838fedbcfe 253 SUPERFAMILY SSF51735 3 247 1.14E-70 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_08730 0b3b315bf16ece1cc20b6f838fedbcfe 253 Gene3D G3DSA:3.40.50.720 2 251 2.8E-68 T 11-10-2018 IX88_08730 0b3b315bf16ece1cc20b6f838fedbcfe 253 Pfam PF00106 short chain dehydrogenase 4 189 1.2E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_08730 0b3b315bf16ece1cc20b6f838fedbcfe 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_02760 1c0305eddaa1e92600f4dd13aa9cb858 124 SUPERFAMILY SSF89946 3 121 1.03E-34 T 11-10-2018 IPR036701 RraB-like superfamily IX88_02760 1c0305eddaa1e92600f4dd13aa9cb858 124 Gene3D G3DSA:3.30.70.970 2 122 8.6E-11 T 11-10-2018 IPR036701 RraB-like superfamily IX88_02760 1c0305eddaa1e92600f4dd13aa9cb858 124 Pfam PF06877 Regulator of ribonuclease activity B 11 110 4.4E-27 T 11-10-2018 IPR009671 Regulator of ribonuclease activity B domain IX88_01650 954480851d5bd61191134732f7d01f96 171 SUPERFAMILY SSF158442 11 159 1.7E-41 T 11-10-2018 IPR023380 DsbB-like superfamily IX88_01650 954480851d5bd61191134732f7d01f96 171 Pfam PF02600 Disulfide bond formation protein DsbB 6 157 8.7E-41 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 IX88_01650 954480851d5bd61191134732f7d01f96 171 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 1 165 22.825 T 11-10-2018 IPR022920 Disulphide bond formation protein DsbB IX88_01650 954480851d5bd61191134732f7d01f96 171 Gene3D G3DSA:1.20.1550.10 3 170 4.7E-49 T 11-10-2018 IPR023380 DsbB-like superfamily IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 Gene3D G3DSA:2.60.34.10 382 522 1.7E-64 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 Gene3D G3DSA:1.20.1270.10 523 606 1.4E-20 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 387 406 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 137 157 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 468 484 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 PRINTS PR00301 70kDa heat shock protein signature 333 349 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 SUPERFAMILY SSF100920 383 539 8.37E-60 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 SUPERFAMILY SSF53067 2 182 5.18E-65 T 11-10-2018 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 Pfam PF00012 Hsp70 protein 4 603 6.2E-260 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 Gene3D G3DSA:3.30.420.40 5 378 3.2E-165 T 11-10-2018 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 Gene3D G3DSA:3.30.420.40 179 365 3.2E-165 T 11-10-2018 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 3.6E-283 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 Gene3D G3DSA:3.90.640.10 228 315 3.2E-165 T 11-10-2018 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 641 36.113 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 SUPERFAMILY SSF53067 186 381 5.44E-67 T 11-10-2018 IX88_02335 e5b6b1c910bfcf5655d702a5d84d86c7 646 SUPERFAMILY SSF100934 506 603 7.72E-18 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 IX88_16620 c75583aea7f30f156f81e52deaa07200 145 PIRSF PIRSF006276 1 145 9.3E-20 T 11-10-2018 IPR006015 Universal stress protein A IX88_16620 c75583aea7f30f156f81e52deaa07200 145 SUPERFAMILY SSF52402 3 145 1.34E-38 T 11-10-2018 IX88_16620 c75583aea7f30f156f81e52deaa07200 145 Pfam PF00582 Universal stress protein family 3 145 2.8E-30 T 11-10-2018 IPR006016 UspA IX88_16620 c75583aea7f30f156f81e52deaa07200 145 Gene3D G3DSA:3.40.50.620 1 145 1.3E-38 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_16620 c75583aea7f30f156f81e52deaa07200 145 PRINTS PR01438 Universal stress protein signature 3 21 4.4E-22 T 11-10-2018 IPR006015 Universal stress protein A IX88_16620 c75583aea7f30f156f81e52deaa07200 145 PRINTS PR01438 Universal stress protein signature 123 145 4.4E-22 T 11-10-2018 IPR006015 Universal stress protein A IX88_16620 c75583aea7f30f156f81e52deaa07200 145 PRINTS PR01438 Universal stress protein signature 105 117 4.4E-22 T 11-10-2018 IPR006015 Universal stress protein A IX88_10830 ae61c0a53a3de0d23719e5d3141078bb 316 Pfam PF16223 Domain of unknown function (DUF4882) 49 314 2.3E-140 T 11-10-2018 IPR032620 Protein of unknown function DUF4882 IX88_02965 f6fc2a5e30a4ca713d8911fa391094fc 175 Pfam PF03551 Transcriptional regulator PadR-like family 38 105 1.5E-16 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal IX88_02965 f6fc2a5e30a4ca713d8911fa391094fc 175 SUPERFAMILY SSF46785 20 120 1.59E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_02965 f6fc2a5e30a4ca713d8911fa391094fc 175 Gene3D G3DSA:1.10.10.10 20 141 1.8E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_05475 03ccf66d72b9666a25f2f73e44fc882b 228 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 204 7.6E-88 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 IX88_05475 03ccf66d72b9666a25f2f73e44fc882b 228 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 137 159 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 IX88_05475 03ccf66d72b9666a25f2f73e44fc882b 228 Gene3D G3DSA:3.20.20.70 6 223 1.6E-82 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_05475 03ccf66d72b9666a25f2f73e44fc882b 228 SUPERFAMILY SSF51366 4 219 1.99E-74 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 IX88_05475 03ccf66d72b9666a25f2f73e44fc882b 228 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 217 2.5E-96 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 IX88_05475 03ccf66d72b9666a25f2f73e44fc882b 228 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 IX88_05475 03ccf66d72b9666a25f2f73e44fc882b 228 PIRSF PIRSF001461 1 228 9.9E-102 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 IX88_05600 146858bb363ed2ed34a20f10df16ca57 309 Pfam PF03466 LysR substrate binding domain 85 283 4.1E-24 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_05600 146858bb363ed2ed34a20f10df16ca57 309 SUPERFAMILY SSF53850 87 296 1.24E-24 T 11-10-2018 IX88_05600 146858bb363ed2ed34a20f10df16ca57 309 Gene3D G3DSA:1.10.10.10 1 90 5.6E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_05600 146858bb363ed2ed34a20f10df16ca57 309 SUPERFAMILY SSF46785 2 107 1.41E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_05600 146858bb363ed2ed34a20f10df16ca57 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.2E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_05600 146858bb363ed2ed34a20f10df16ca57 309 Gene3D G3DSA:3.40.190.290 91 297 4.8E-30 T 11-10-2018 IX88_02990 14c51d3d10fd136ff35d8ee6b9f0e258 208 Gene3D G3DSA:3.30.70.1070 127 207 5.4E-16 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 IX88_02990 14c51d3d10fd136ff35d8ee6b9f0e258 208 Pfam PF05036 Sporulation related domain 133 206 1.5E-17 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 IX88_02990 14c51d3d10fd136ff35d8ee6b9f0e258 208 SUPERFAMILY SSF110997 131 206 3.79E-16 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 IX88_08275 050eaffee4cfb52e6cd2e049001f8f14 148 Gene3D G3DSA:1.10.10.10 4 148 5.1E-41 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_08275 050eaffee4cfb52e6cd2e049001f8f14 148 Pfam PF01638 HxlR-like helix-turn-helix 20 105 6.4E-21 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type IX88_08275 050eaffee4cfb52e6cd2e049001f8f14 148 SUPERFAMILY SSF46785 8 144 2.55E-37 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_01270 14d656a7667ea21831f457d27ea1a4e6 655 ProSitePatterns PS01303 BCCT family of transporters signature. 316 325 - T 11-10-2018 IPR018093 BCCT transporter, conserved site IX88_01270 14d656a7667ea21831f457d27ea1a4e6 655 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 16 496 2.1E-194 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 IX88_01270 14d656a7667ea21831f457d27ea1a4e6 655 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 54 497 6.9E-166 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 IX88_10220 b410add954cc6e3be06c5532d9fdcdbb 351 Gene3D G3DSA:1.10.1610.10 22 345 7.2E-124 T 11-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 IX88_10220 b410add954cc6e3be06c5532d9fdcdbb 351 Gene3D G3DSA:3.40.50.10210 54 328 7.2E-124 T 11-10-2018 IX88_10220 b410add954cc6e3be06c5532d9fdcdbb 351 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 10 347 34.132 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 IX88_10220 b410add954cc6e3be06c5532d9fdcdbb 351 Pfam PF02277 Phosphoribosyltransferase 8 345 1.3E-125 T 11-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 IX88_10220 b410add954cc6e3be06c5532d9fdcdbb 351 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 14 345 5.8E-127 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 IX88_10220 b410add954cc6e3be06c5532d9fdcdbb 351 SUPERFAMILY SSF52733 2 346 2.22E-112 T 11-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 IX88_02585 9b49abd42e89e76f03a4b7602628cb42 368 Pfam PF02563 Polysaccharide biosynthesis/export protein 76 162 3.0E-21 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 IX88_02585 9b49abd42e89e76f03a4b7602628cb42 368 Gene3D G3DSA:3.10.560.10 61 252 3.9E-78 T 11-10-2018 IX88_02585 9b49abd42e89e76f03a4b7602628cb42 368 Gene3D G3DSA:3.10.560.10 51 337 3.9E-78 T 11-10-2018 IX88_02585 9b49abd42e89e76f03a4b7602628cb42 368 Gene3D G3DSA:3.30.1950.10 83 166 3.9E-78 T 11-10-2018 IX88_11485 8a1f56eba962b97be0634c79ce6c93b8 175 Pfam PF13577 SnoaL-like domain 16 150 7.9E-19 T 11-10-2018 IPR037401 SnoaL-like domain IX88_11485 8a1f56eba962b97be0634c79ce6c93b8 175 Gene3D G3DSA:3.10.450.50 11 160 1.3E-22 T 11-10-2018 IX88_11485 8a1f56eba962b97be0634c79ce6c93b8 175 SUPERFAMILY SSF54427 7 163 2.85E-20 T 11-10-2018 IPR032710 NTF2-like domain superfamily IX88_07475 41eee345de7789dee6bb400f829da9dd 363 Pfam PF09588 YqaJ-like viral recombinase domain 57 198 1.1E-34 T 11-10-2018 IPR019080 YqaJ viral recombinase IX88_07475 41eee345de7789dee6bb400f829da9dd 363 SUPERFAMILY SSF52980 50 244 1.29E-33 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 IX88_07475 41eee345de7789dee6bb400f829da9dd 363 Gene3D G3DSA:3.90.320.10 53 262 1.4E-38 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal IX88_07475 41eee345de7789dee6bb400f829da9dd 363 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 50 207 4.9E-39 T 11-10-2018 IPR017482 Putative phage-type endonuclease IX88_00190 f1e988a047b7e151cfe8dbc7b718ba9b 254 Gene3D G3DSA:2.40.30.10 150 253 7.6E-14 T 11-10-2018 IX88_00190 f1e988a047b7e151cfe8dbc7b718ba9b 254 Pfam PF00042 Globin 5 101 2.5E-9 T 11-10-2018 IPR000971 Globin GO:0020037 IX88_00190 f1e988a047b7e151cfe8dbc7b718ba9b 254 SUPERFAMILY SSF46458 1 142 1.06E-35 T 11-10-2018 IPR009050 Globin-like superfamily IX88_00190 f1e988a047b7e151cfe8dbc7b718ba9b 254 SUPERFAMILY SSF63380 150 251 4.68E-10 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel IX88_00190 f1e988a047b7e151cfe8dbc7b718ba9b 254 Gene3D G3DSA:1.10.490.10 1 149 6.5E-49 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 IX88_07350 bf4b9042a5522ced431985d5e161c1ff 125 Pfam PF15569 Immunity protein 40 23 100 2.9E-7 T 11-10-2018 IPR029080 Immunity protein 40 IX88_04695 d576b9a0c63c9ac2f0dbcec3924745f6 238 Pfam PF11008 Protein of unknown function (DUF2846) 55 163 2.9E-25 T 11-10-2018 IPR022548 Domain of unknown function DUF2846 IX88_03195 c09c10b211c4735855880e9e45ed6f36 188 SUPERFAMILY SSF52218 1 183 1.97E-42 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_03195 c09c10b211c4735855880e9e45ed6f36 188 Gene3D G3DSA:3.40.50.360 1 187 4.8E-50 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_03195 c09c10b211c4735855880e9e45ed6f36 188 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 IX88_03195 c09c10b211c4735855880e9e45ed6f36 188 Pfam PF03358 NADPH-dependent FMN reductase 41 103 2.4E-10 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 IX88_03435 920f479c794171c9c344b09d57320c44 306 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 17 306 55.814 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 IX88_03435 920f479c794171c9c344b09d57320c44 306 SUPERFAMILY SSF56349 21 297 1.44E-59 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 IX88_03435 920f479c794171c9c344b09d57320c44 306 Gene3D G3DSA:1.10.150.130 18 109 2.4E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal IX88_03435 920f479c794171c9c344b09d57320c44 306 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 24 305 3.6E-110 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 IX88_03435 920f479c794171c9c344b09d57320c44 306 Gene3D G3DSA:1.10.443.10 120 300 1.0E-69 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 IX88_03435 920f479c794171c9c344b09d57320c44 306 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 21 100 2.7E-14 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 IX88_03435 920f479c794171c9c344b09d57320c44 306 Pfam PF00589 Phage integrase family 123 291 1.9E-52 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 IX88_03435 920f479c794171c9c344b09d57320c44 306 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 19 306 55.892 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD IX88_16800 2d0b999fda90696a29529ec06934b66c 423 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 399 4.4E-40 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 IX88_16800 2d0b999fda90696a29529ec06934b66c 423 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 41.415 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 IX88_16800 2d0b999fda90696a29529ec06934b66c 423 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 8.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 IX88_16800 2d0b999fda90696a29529ec06934b66c 423 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 8.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 IX88_16800 2d0b999fda90696a29529ec06934b66c 423 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 8.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 IX88_16800 2d0b999fda90696a29529ec06934b66c 423 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 8.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 IX88_16800 2d0b999fda90696a29529ec06934b66c 423 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 8.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 IX88_16800 2d0b999fda90696a29529ec06934b66c 423 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 3.7E-175 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 IX88_16800 2d0b999fda90696a29529ec06934b66c 423 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 2.4E-30 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 IX88_16800 2d0b999fda90696a29529ec06934b66c 423 SUPERFAMILY SSF46589 1 112 1.2E-30 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 IX88_16800 2d0b999fda90696a29529ec06934b66c 423 PIRSF PIRSF001529 1 423 3.6E-185 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 IX88_16800 2d0b999fda90696a29529ec06934b66c 423 Gene3D G3DSA:3.30.930.10 105 423 5.4E-120 T 11-10-2018 IX88_16800 2d0b999fda90696a29529ec06934b66c 423 SUPERFAMILY SSF55681 116 417 1.09E-103 T 11-10-2018 IX88_16800 2d0b999fda90696a29529ec06934b66c 423 Gene3D G3DSA:1.10.287.40 1 104 7.7E-24 T 11-10-2018 IX88_02855 532fc180b8c1284182981ee90d1ecfbd 121 Gene3D G3DSA:3.10.450.610 1 119 2.7E-27 T 11-10-2018 IX88_02855 532fc180b8c1284182981ee90d1ecfbd 121 Pfam PF16245 Domain of unknown function (DUF4902) 1 103 4.8E-20 T 11-10-2018 IPR032598 Protein of unknown function DUF4902 IX88_04270 0703ef9292875658d15bc12221f5a831 384 Pfam PF04055 Radical SAM superfamily 15 185 7.1E-22 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 IX88_04270 0703ef9292875658d15bc12221f5a831 384 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 11 376 5.8E-117 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 IX88_04270 0703ef9292875658d15bc12221f5a831 384 SUPERFAMILY SSF102114 10 384 1.96E-102 T 11-10-2018 IX88_04270 0703ef9292875658d15bc12221f5a831 384 Pfam PF06969 HemN C-terminal domain 312 372 3.0E-12 T 11-10-2018 IPR010723 HemN, C-terminal IX88_04270 0703ef9292875658d15bc12221f5a831 384 Gene3D G3DSA:3.80.30.20 2 311 4.5E-93 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe IX88_04270 0703ef9292875658d15bc12221f5a831 384 SMART SM00729 10 230 1.1E-50 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 IX88_00155 f26acbe57a8e705ccbad17db0801a2bc 106 Pfam PF00276 Ribosomal protein L23 9 93 1.4E-28 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 IX88_00155 f26acbe57a8e705ccbad17db0801a2bc 106 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 21.2 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 IX88_00155 f26acbe57a8e705ccbad17db0801a2bc 106 Gene3D G3DSA:3.30.70.330 1 97 1.0E-32 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily IX88_00155 f26acbe57a8e705ccbad17db0801a2bc 106 SUPERFAMILY SSF54189 2 91 3.24E-31 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_14815 b70e9d66ba05bc8ae2a09c25c44e3d94 285 Pfam PF09356 Phage conserved hypothetical protein BR0599 204 279 4.0E-24 T 11-10-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal IX88_14815 b70e9d66ba05bc8ae2a09c25c44e3d94 285 TIGRFAM TIGR02218 phg_TIGR02218: phage conserved hypothetical protein BR0599 25 279 3.8E-30 T 11-10-2018 IPR011928 Bacteriophage phiJL001, Gp84 IX88_14815 b70e9d66ba05bc8ae2a09c25c44e3d94 285 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 1 175 4.3E-34 T 11-10-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal IX88_15640 84a20239128b1568e4ab8f0f56f6e9dd 416 Gene3D G3DSA:3.90.550.10 29 269 8.4E-47 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_15640 84a20239128b1568e4ab8f0f56f6e9dd 416 SUPERFAMILY SSF53448 42 317 1.41E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_15640 84a20239128b1568e4ab8f0f56f6e9dd 416 Pfam PF13641 Glycosyltransferase like family 2 52 278 1.4E-35 T 11-10-2018 IX88_11525 568f984b366bfdea95a4aa3dee44ebb9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.6E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11525 568f984b366bfdea95a4aa3dee44ebb9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 5.6E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11525 568f984b366bfdea95a4aa3dee44ebb9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.6E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11525 568f984b366bfdea95a4aa3dee44ebb9 247 SUPERFAMILY SSF51735 3 234 3.04E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_11525 568f984b366bfdea95a4aa3dee44ebb9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.8E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11525 568f984b366bfdea95a4aa3dee44ebb9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.8E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11525 568f984b366bfdea95a4aa3dee44ebb9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 4.8E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11525 568f984b366bfdea95a4aa3dee44ebb9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.8E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11525 568f984b366bfdea95a4aa3dee44ebb9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.8E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11525 568f984b366bfdea95a4aa3dee44ebb9 247 Gene3D G3DSA:3.40.50.720 2 245 1.1E-54 T 11-10-2018 IX88_11525 568f984b366bfdea95a4aa3dee44ebb9 247 Pfam PF00106 short chain dehydrogenase 3 194 4.6E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10150 0cd8755260a690931c1c69f82db5eec5 479 Pfam PF07690 Major Facilitator Superfamily 25 418 3.3E-46 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_10150 0cd8755260a690931c1c69f82db5eec5 479 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 431 4.8E-71 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 IX88_10150 0cd8755260a690931c1c69f82db5eec5 479 Gene3D G3DSA:1.20.1720.10 20 223 1.1E-38 T 11-10-2018 IX88_10150 0cd8755260a690931c1c69f82db5eec5 479 Gene3D G3DSA:1.20.1250.20 268 473 1.1E-17 T 11-10-2018 IX88_10150 0cd8755260a690931c1c69f82db5eec5 479 SUPERFAMILY SSF103473 17 473 1.96E-59 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_10175 5d92490efcc64bcfb7d94c2638ed122f 772 Pfam PF07715 TonB-dependent Receptor Plug Domain 80 182 1.5E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_10175 5d92490efcc64bcfb7d94c2638ed122f 772 SUPERFAMILY SSF56935 58 772 3.37E-95 T 11-10-2018 IX88_10175 5d92490efcc64bcfb7d94c2638ed122f 772 Gene3D G3DSA:2.170.130.10 65 187 4.7E-22 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_10175 5d92490efcc64bcfb7d94c2638ed122f 772 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 81 771 5.4E-67 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 IX88_10175 5d92490efcc64bcfb7d94c2638ed122f 772 Pfam PF00593 TonB dependent receptor 275 771 8.4E-36 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_10175 5d92490efcc64bcfb7d94c2638ed122f 772 Gene3D G3DSA:2.40.170.20 217 772 5.0E-58 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IX88_13770 7f7d6b44668c557473901284346db0b3 214 SUPERFAMILY SSF53448 1 202 1.13E-29 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_13770 7f7d6b44668c557473901284346db0b3 214 Gene3D G3DSA:3.90.550.10 1 199 1.0E-27 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_13770 7f7d6b44668c557473901284346db0b3 214 Pfam PF00535 Glycosyl transferase family 2 5 127 4.9E-14 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 IX88_07610 e918e6da331258f97b5f7a5117f4ae2a 1064 Gene3D G3DSA:3.30.1920.30 254 336 4.4E-41 T 11-10-2018 IX88_07610 e918e6da331258f97b5f7a5117f4ae2a 1064 SUPERFAMILY SSF69279 25 197 2.21E-38 T 11-10-2018 IX88_07610 e918e6da331258f97b5f7a5117f4ae2a 1064 Gene3D G3DSA:2.30.110.50 30 379 4.4E-41 T 11-10-2018 IX88_07610 e918e6da331258f97b5f7a5117f4ae2a 1064 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 35 586 2.9E-58 T 11-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein IX88_07610 e918e6da331258f97b5f7a5117f4ae2a 1064 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 30 583 9.0E-68 T 11-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset IX88_07610 e918e6da331258f97b5f7a5117f4ae2a 1064 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 688 836 3.8E-42 T 11-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal IX88_07610 e918e6da331258f97b5f7a5117f4ae2a 1064 Pfam PF05954 Phage late control gene D protein (GPD) 44 384 3.3E-57 T 11-10-2018 IX88_07610 e918e6da331258f97b5f7a5117f4ae2a 1064 SUPERFAMILY SSF69255 436 531 7.06E-25 T 11-10-2018 IX88_07610 e918e6da331258f97b5f7a5117f4ae2a 1064 Gene3D G3DSA:2.40.50.230 427 536 2.7E-32 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily IX88_07610 e918e6da331258f97b5f7a5117f4ae2a 1064 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 559 666 3.8E-37 T 11-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain IX88_07610 e918e6da331258f97b5f7a5117f4ae2a 1064 Gene3D G3DSA:3.55.50.10 111 221 4.4E-41 T 11-10-2018 IX88_13795 ed148c39b96281983de5d8197f5d64e8 465 Pfam PF00324 Amino acid permease 17 430 8.1E-106 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 IX88_13795 ed148c39b96281983de5d8197f5d64e8 465 PIRSF PIRSF006060 2 463 8.2E-70 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_13795 ed148c39b96281983de5d8197f5d64e8 465 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 IX88_13795 ed148c39b96281983de5d8197f5d64e8 465 Gene3D G3DSA:1.20.1740.10 11 464 1.1E-61 T 11-10-2018 IX88_06940 041df4b72267175610c55a75a1f33cf2 207 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 32 192 3.9E-26 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain IX88_06940 041df4b72267175610c55a75a1f33cf2 207 Gene3D G3DSA:3.40.50.1110 25 207 7.8E-66 T 11-10-2018 IPR036514 SGNH hydrolase superfamily IX88_06940 041df4b72267175610c55a75a1f33cf2 207 SUPERFAMILY SSF52266 27 205 1.02E-48 T 11-10-2018 IX88_06940 041df4b72267175610c55a75a1f33cf2 207 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 29 39 - T 11-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 IX88_06425 85404b53f9d28624438bb44ca93eb080 282 Gene3D G3DSA:3.60.20.10 1 259 9.0E-95 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IX88_06425 85404b53f9d28624438bb44ca93eb080 282 Pfam PF13230 Glutamine amidotransferases class-II 1 266 1.2E-120 T 11-10-2018 IPR026869 Putative glutamine amidotransferase type 2 IX88_06425 85404b53f9d28624438bb44ca93eb080 282 SUPERFAMILY SSF56235 2 252 1.67E-47 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IX88_04835 a3d0ba1a6e029c1f3fc8601002fc1610 218 Gene3D G3DSA:3.90.470.20 96 181 3.1E-29 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IX88_04835 a3d0ba1a6e029c1f3fc8601002fc1610 218 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 96 174 1.1E-13 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IX88_04835 a3d0ba1a6e029c1f3fc8601002fc1610 218 SUPERFAMILY SSF56214 95 205 1.83E-20 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IX88_04835 a3d0ba1a6e029c1f3fc8601002fc1610 218 Gene3D G3DSA:3.90.470.20 39 95 3.1E-29 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IX88_04835 a3d0ba1a6e029c1f3fc8601002fc1610 218 SUPERFAMILY SSF56214 38 86 1.7E-10 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 IX88_15110 7ea767572a09de90897c0f03b0804556 327 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 21 320 1.1E-85 T 11-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC IX88_15110 7ea767572a09de90897c0f03b0804556 327 SUPERFAMILY SSF51735 172 261 3.35E-6 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_15110 7ea767572a09de90897c0f03b0804556 327 Gene3D G3DSA:3.40.50.720 174 323 1.4E-33 T 11-10-2018 IX88_15110 7ea767572a09de90897c0f03b0804556 327 Pfam PF13478 XdhC Rossmann domain 175 319 6.7E-34 T 11-10-2018 IPR027051 XdhC Rossmann domain IX88_15110 7ea767572a09de90897c0f03b0804556 327 Pfam PF02625 XdhC and CoxI family 17 82 3.5E-14 T 11-10-2018 IPR003777 XdhC- CoxI IX88_16910 a35d74fc0f19da89e4ef6b490ecb80f6 395 ProSitePatterns PS01219 Ammonium transporters signature. 152 177 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 IX88_16910 a35d74fc0f19da89e4ef6b490ecb80f6 395 SUPERFAMILY SSF111352 2 370 2.22E-94 T 11-10-2018 IX88_16910 a35d74fc0f19da89e4ef6b490ecb80f6 395 Gene3D G3DSA:1.10.3430.10 1 394 3.6E-97 T 11-10-2018 IPR029020 Ammonium/urea transporter IX88_16910 a35d74fc0f19da89e4ef6b490ecb80f6 395 Pfam PF00909 Ammonium Transporter Family 8 386 5.5E-84 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 IX88_07040 cfa16ef0a1e00f081d102d3729860c30 445 TIGRFAM TIGR00784 citMHS: citrate transporter 1 439 1.9E-171 T 11-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 IX88_07040 cfa16ef0a1e00f081d102d3729860c30 445 Pfam PF03600 Citrate transporter 13 387 2.6E-50 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 IX88_09725 7ddf998a2b88749e49f63560baa80348 197 PIRSF PIRSF006305 1 196 3.9E-38 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 IX88_09725 7ddf998a2b88749e49f63560baa80348 197 SUPERFAMILY SSF52972 2 191 5.23E-50 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like IX88_09725 7ddf998a2b88749e49f63560baa80348 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 190 3.1E-38 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 IX88_09725 7ddf998a2b88749e49f63560baa80348 197 Gene3D G3DSA:3.90.950.10 4 196 2.3E-48 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like IX88_09725 7ddf998a2b88749e49f63560baa80348 197 Hamap MF_00528 Septum formation protein Maf [maf]. 5 196 22.255 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 IX88_09725 7ddf998a2b88749e49f63560baa80348 197 Pfam PF02545 Maf-like protein 5 191 6.6E-38 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 IX88_00845 004b63393d671204cd98ae5b66270fc4 318 SUPERFAMILY SSF160240 218 289 3.4E-6 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 IX88_00845 004b63393d671204cd98ae5b66270fc4 318 SUPERFAMILY SSF161111 19 214 3.01E-59 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily IX88_00845 004b63393d671204cd98ae5b66270fc4 318 Gene3D G3DSA:1.20.1510.10 19 213 2.7E-48 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily IX88_00845 004b63393d671204cd98ae5b66270fc4 318 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 19 291 5.9E-89 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 IX88_00845 004b63393d671204cd98ae5b66270fc4 318 Pfam PF01545 Cation efflux family 22 213 5.5E-49 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 IX88_04245 ca449864a8c8a4d68e0cffdaffd1e43d 432 SUPERFAMILY SSF56112 93 351 4.8E-19 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily IX88_04245 ca449864a8c8a4d68e0cffdaffd1e43d 432 Pfam PF03109 ABC1 family 111 228 3.2E-32 T 11-10-2018 IPR004147 UbiB domain IX88_08070 b386242db91d632fd19b76669af8afd6 203 SUPERFAMILY SSF52833 1 84 1.45E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_08070 b386242db91d632fd19b76669af8afd6 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 111 189 4.0E-8 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal IX88_08070 b386242db91d632fd19b76669af8afd6 203 SUPERFAMILY SSF47616 81 199 1.09E-21 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IX88_08070 b386242db91d632fd19b76669af8afd6 203 Gene3D G3DSA:1.20.1050.10 83 189 1.9E-59 T 11-10-2018 IX88_08070 b386242db91d632fd19b76669af8afd6 203 Gene3D G3DSA:3.40.30.10 3 195 1.9E-59 T 11-10-2018 IX88_08070 b386242db91d632fd19b76669af8afd6 203 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 75 2.0E-9 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 IX88_01220 7c1677820f9d28afa34156b64f10d894 454 SUPERFAMILY SSF103473 6 384 5.1E-54 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_01220 7c1677820f9d28afa34156b64f10d894 454 Gene3D G3DSA:3.30.70.100 385 447 1.0E-7 T 11-10-2018 IX88_01220 7c1677820f9d28afa34156b64f10d894 454 Pfam PF07690 Major Facilitator Superfamily 15 349 6.4E-38 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_01220 7c1677820f9d28afa34156b64f10d894 454 Gene3D G3DSA:1.20.1250.20 1 384 1.4E-68 T 11-10-2018 IX88_04655 7f11f5d5e395f458b7388ade1aca4320 197 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 2 195 2.3E-79 T 11-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 IX88_04655 7f11f5d5e395f458b7388ade1aca4320 197 SUPERFAMILY SSF53335 9 171 2.41E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_04655 7f11f5d5e395f458b7388ade1aca4320 197 Gene3D G3DSA:3.40.50.150 2 173 1.6E-26 T 11-10-2018 IX88_04655 7f11f5d5e395f458b7388ade1aca4320 197 Pfam PF07021 Methionine biosynthesis protein MetW 2 194 9.0E-76 T 11-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 IX88_17560 e500c97248019d890260423900a738fa 616 Pfam PF00593 TonB dependent receptor 236 614 5.1E-46 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_17560 e500c97248019d890260423900a738fa 616 SUPERFAMILY SSF56935 31 616 1.57E-104 T 11-10-2018 IX88_17560 e500c97248019d890260423900a738fa 616 Gene3D G3DSA:2.170.130.10 40 163 1.8E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_17560 e500c97248019d890260423900a738fa 616 Gene3D G3DSA:2.40.170.20 166 614 4.2E-74 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IX88_17560 e500c97248019d890260423900a738fa 616 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 159 2.8E-24 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_11350 4070e053ce3c199254f78d91ec923b47 412 SUPERFAMILY SSF51395 11 344 2.81E-103 T 11-10-2018 IX88_11350 4070e053ce3c199254f78d91ec923b47 412 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 14 341 6.9E-57 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 IX88_11350 4070e053ce3c199254f78d91ec923b47 412 Gene3D G3DSA:3.20.20.70 1 355 1.7E-113 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_04160 d0f2649bd1b3c7e04ebf5653c4c60d65 519 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 73 458 2.2E-94 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 IX88_04160 d0f2649bd1b3c7e04ebf5653c4c60d65 519 Pfam PF00795 Carbon-nitrogen hydrolase 228 476 5.1E-30 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 IX88_04160 d0f2649bd1b3c7e04ebf5653c4c60d65 519 SUPERFAMILY SSF56317 224 489 1.28E-44 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily IX88_04160 d0f2649bd1b3c7e04ebf5653c4c60d65 519 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 20 496 22.43 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 IX88_04160 d0f2649bd1b3c7e04ebf5653c4c60d65 519 Gene3D G3DSA:3.60.110.10 223 481 3.0E-13 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily IX88_18050 cf2c91c8de722719d4f151d8424c181b 285 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 270 39.693 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 IX88_18050 cf2c91c8de722719d4f151d8424c181b 285 SUPERFAMILY SSF53335 8 276 1.39E-83 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_18050 cf2c91c8de722719d4f151d8424c181b 285 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 283 8.7E-72 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 IX88_18050 cf2c91c8de722719d4f151d8424c181b 285 Gene3D G3DSA:3.40.50.150 1 285 1.8E-100 T 11-10-2018 IX88_07230 6bb7ba8e163eae9f9fdfc64a7c964503 210 Gene3D G3DSA:1.20.120.740 2 175 1.0E-39 T 11-10-2018 IX88_07230 6bb7ba8e163eae9f9fdfc64a7c964503 210 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 10 166 2.2E-10 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 IX88_07230 6bb7ba8e163eae9f9fdfc64a7c964503 210 SUPERFAMILY SSF101327 7 167 1.15E-35 T 11-10-2018 IPR036255 YgfB-like superfamily IX88_07230 6bb7ba8e163eae9f9fdfc64a7c964503 210 Pfam PF03695 Uncharacterised protein family (UPF0149) 21 164 4.0E-23 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 IX88_04320 5271f933a968f56f428154609ba2bfdf 201 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 73 1.9E-15 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 IX88_04320 5271f933a968f56f428154609ba2bfdf 201 Gene3D G3DSA:3.40.30.10 5 193 1.4E-40 T 11-10-2018 IX88_04320 5271f933a968f56f428154609ba2bfdf 201 SUPERFAMILY SSF52833 2 83 4.18E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_04320 5271f933a968f56f428154609ba2bfdf 201 Pfam PF14497 Glutathione S-transferase, C-terminal domain 135 194 7.2E-5 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal IX88_04320 5271f933a968f56f428154609ba2bfdf 201 SUPERFAMILY SSF47616 80 194 4.87E-15 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IX88_04320 5271f933a968f56f428154609ba2bfdf 201 Gene3D G3DSA:1.20.1050.10 82 189 1.4E-40 T 11-10-2018 IX88_11320 a22a4657d0c9c6dd8d26f970a571833f 182 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site IX88_11320 a22a4657d0c9c6dd8d26f970a571833f 182 Pfam PF02082 Transcriptional regulator 4 83 1.3E-24 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type IX88_11320 a22a4657d0c9c6dd8d26f970a571833f 182 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 4 141 1.5E-30 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type IX88_11320 a22a4657d0c9c6dd8d26f970a571833f 182 SUPERFAMILY SSF46785 4 144 1.77E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_11320 a22a4657d0c9c6dd8d26f970a571833f 182 Gene3D G3DSA:1.10.10.10 2 148 2.1E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_12935 ef822bd31fb6e6a83a1be48962392d38 184 SUPERFAMILY SSF46689 6 73 4.16E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_12935 ef822bd31fb6e6a83a1be48962392d38 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.3E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_12935 ef822bd31fb6e6a83a1be48962392d38 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.3E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_12935 ef822bd31fb6e6a83a1be48962392d38 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 1.5E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_12935 ef822bd31fb6e6a83a1be48962392d38 184 Gene3D G3DSA:1.10.357.10 3 179 1.8E-22 T 11-10-2018 IX88_16040 625ec6b5496c8bc11cac8dcd44fe283d 617 SUPERFAMILY SSF51126 7 458 1.1E-17 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor IX88_16040 625ec6b5496c8bc11cac8dcd44fe283d 617 TIGRFAM TIGR04212 GlyGly_RbtA: rhombotarget A 1 615 6.6E-296 T 11-10-2018 IPR026454 Rhombotarget A IX88_16040 625ec6b5496c8bc11cac8dcd44fe283d 617 TIGRFAM TIGR04214 CSLREA_Nterm: CSLREA domain 24 47 1.4E-9 T 11-10-2018 IPR026457 CSLREA domain IX88_13505 3a261689384201d931542d7e1e434f33 231 SUPERFAMILY SSF161098 25 221 4.06E-42 T 11-10-2018 IPR035906 MetI-like superfamily IX88_13505 3a261689384201d931542d7e1e434f33 231 Gene3D G3DSA:1.10.3720.10 21 230 2.2E-44 T 11-10-2018 IPR035906 MetI-like superfamily IX88_13505 3a261689384201d931542d7e1e434f33 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 63 228 7.3E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_10565 b981096a4c32420ce7645f7622c1c79a 107 Gene3D G3DSA:1.20.1250.20 11 107 1.3E-16 T 11-10-2018 IX88_10565 b981096a4c32420ce7645f7622c1c79a 107 Pfam PF00083 Sugar (and other) transporter 18 104 4.9E-9 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 IX88_10565 b981096a4c32420ce7645f7622c1c79a 107 SUPERFAMILY SSF103473 8 105 9.94E-18 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_01490 f517cf9e0df3b2aac706e445b98624d8 274 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 14 268 1.6E-64 T 11-10-2018 IX88_01490 f517cf9e0df3b2aac706e445b98624d8 274 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 18 263 4.5E-20 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase IX88_01490 f517cf9e0df3b2aac706e445b98624d8 274 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 14 270 1.6E-67 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 IX88_01490 f517cf9e0df3b2aac706e445b98624d8 274 SUPERFAMILY SSF56219 14 271 9.42E-71 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily IX88_01490 f517cf9e0df3b2aac706e445b98624d8 274 Gene3D G3DSA:3.60.10.10 12 273 1.3E-78 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily IX88_08840 8920f7abece843ee22e108818b17ca74 412 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 203 398 1.3E-22 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain IX88_08840 8920f7abece843ee22e108818b17ca74 412 Gene3D G3DSA:3.40.50.1110 167 412 1.7E-31 T 11-10-2018 IPR036514 SGNH hydrolase superfamily IX88_08840 8920f7abece843ee22e108818b17ca74 412 SUPERFAMILY SSF52266 192 404 9.16E-45 T 11-10-2018 IX88_08765 ba69bdb85fe9f2a15879a6dfeb5efd4b 405 Pfam PF07690 Major Facilitator Superfamily 25 275 3.9E-22 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_08765 ba69bdb85fe9f2a15879a6dfeb5efd4b 405 SUPERFAMILY SSF103473 15 397 6.67E-44 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_08765 ba69bdb85fe9f2a15879a6dfeb5efd4b 405 Gene3D G3DSA:1.20.1250.20 13 387 3.7E-38 T 11-10-2018 IX88_05275 1f8e4acff867c1143f3fc1ecb4596850 305 SUPERFAMILY SSF82861 28 109 5.1E-8 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 IX88_05275 1f8e4acff867c1143f3fc1ecb4596850 305 Pfam PF00924 Mechanosensitive ion channel 70 270 6.7E-42 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 IX88_05275 1f8e4acff867c1143f3fc1ecb4596850 305 Gene3D G3DSA:2.30.30.60 127 180 1.1E-8 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily IX88_05275 1f8e4acff867c1143f3fc1ecb4596850 305 Gene3D G3DSA:3.30.70.100 182 275 1.4E-19 T 11-10-2018 IX88_05275 1f8e4acff867c1143f3fc1ecb4596850 305 SUPERFAMILY SSF82689 183 277 1.57E-20 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 IX88_05275 1f8e4acff867c1143f3fc1ecb4596850 305 SUPERFAMILY SSF50182 112 181 9.7E-13 T 11-10-2018 IPR010920 LSM domain superfamily IX88_11980 f58ba8018e8be29eccf9b138f9af7f7e 468 Pfam PF00324 Amino acid permease 24 436 2.4E-86 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 IX88_11980 f58ba8018e8be29eccf9b138f9af7f7e 468 ProSitePatterns PS00218 Amino acid permeases signature. 47 77 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 IX88_11980 f58ba8018e8be29eccf9b138f9af7f7e 468 PIRSF PIRSF006060 5 467 1.6E-62 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_11980 f58ba8018e8be29eccf9b138f9af7f7e 468 Gene3D G3DSA:1.20.1740.10 14 466 6.1E-58 T 11-10-2018 IX88_01505 6a41ff9d29c3b8fa95ac86890cc42b48 303 Gene3D G3DSA:3.40.50.1820 11 302 1.6E-78 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_01505 6a41ff9d29c3b8fa95ac86890cc42b48 303 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 143 155 - T 11-10-2018 IPR033140 Lipase, GDXG, putative serine active site IX88_01505 6a41ff9d29c3b8fa95ac86890cc42b48 303 SUPERFAMILY SSF53474 31 297 4.95E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_01505 6a41ff9d29c3b8fa95ac86890cc42b48 303 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 75 91 - T 11-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 IX88_01505 6a41ff9d29c3b8fa95ac86890cc42b48 303 Pfam PF07859 alpha/beta hydrolase fold 75 277 1.7E-58 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 IX88_03770 5f6da9502ab2a1e4d81cb76821cd9e64 474 Pfam PF13726 Na+-H+ antiporter family 2 88 7.1E-33 T 11-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal IX88_03770 5f6da9502ab2a1e4d81cb76821cd9e64 474 PRINTS PR00173 Glutamate-aspartate symporter signature 407 426 1.4E-5 T 11-10-2018 IX88_03770 5f6da9502ab2a1e4d81cb76821cd9e64 474 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 1.4E-5 T 11-10-2018 IX88_03770 5f6da9502ab2a1e4d81cb76821cd9e64 474 Pfam PF03553 Na+/H+ antiporter family 150 468 8.9E-65 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 IX88_02245 9a58ceb378ce6f912967aa51eaa3ffdc 83 Pfam PF04226 Transglycosylase associated protein 34 81 5.7E-13 T 11-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 IX88_07310 3b961157a96ff104144844b35986eb4a 459 Pfam PF00929 Exonuclease 234 391 3.4E-30 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III IX88_07310 3b961157a96ff104144844b35986eb4a 459 Gene3D G3DSA:3.30.420.10 225 407 5.1E-49 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IX88_07310 3b961157a96ff104144844b35986eb4a 459 SUPERFAMILY SSF53098 4 138 5.06E-48 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_07310 3b961157a96ff104144844b35986eb4a 459 SMART SM00479 232 402 2.0E-40 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III IX88_07310 3b961157a96ff104144844b35986eb4a 459 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 234 439 1.1E-56 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_07310 3b961157a96ff104144844b35986eb4a 459 Hamap MF_00042 Ribonuclease H [rnhA]. 2 145 27.534 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 IX88_07310 3b961157a96ff104144844b35986eb4a 459 SUPERFAMILY SSF53098 225 401 9.62E-48 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily IX88_07310 3b961157a96ff104144844b35986eb4a 459 Gene3D G3DSA:3.30.420.10 1 159 1.2E-52 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 IX88_07310 3b961157a96ff104144844b35986eb4a 459 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 232 451 9.3E-79 T 11-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 IX88_07310 3b961157a96ff104144844b35986eb4a 459 Pfam PF00075 RNase H 4 136 1.3E-41 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 IX88_11805 c8c56daeedb21e156e9030719ad369d9 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 1.3E-173 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 IX88_11805 c8c56daeedb21e156e9030719ad369d9 528 PIRSF PIRSF006446 2 329 4.0E-117 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 IX88_11805 c8c56daeedb21e156e9030719ad369d9 528 PIRSF PIRSF006446 352 526 1.3E-30 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 IX88_04890 2d6658d0da64e26d179a175d4a2ebba0 329 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 20 322 2.2E-48 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 IX88_04890 2d6658d0da64e26d179a175d4a2ebba0 329 Pfam PF06144 DNA polymerase III, delta subunit 20 181 8.8E-15 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 IX88_04890 2d6658d0da64e26d179a175d4a2ebba0 329 Gene3D G3DSA:1.20.272.10 210 328 9.8E-22 T 11-10-2018 IX88_04890 2d6658d0da64e26d179a175d4a2ebba0 329 SUPERFAMILY SSF48019 208 324 6.97E-25 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 IX88_04890 2d6658d0da64e26d179a175d4a2ebba0 329 Gene3D G3DSA:1.10.8.60 143 209 1.4E-10 T 11-10-2018 IX88_04890 2d6658d0da64e26d179a175d4a2ebba0 329 SUPERFAMILY SSF52540 10 206 3.63E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_04890 2d6658d0da64e26d179a175d4a2ebba0 329 Gene3D G3DSA:3.40.50.300 7 134 6.3E-25 T 11-10-2018 IX88_07785 072bf89a29804b67caba9684a4ea9f07 416 Gene3D G3DSA:2.40.160.10 12 416 2.1E-167 T 11-10-2018 IPR023614 Porin domain superfamily IX88_07785 072bf89a29804b67caba9684a4ea9f07 416 Pfam PF03573 outer membrane porin, OprD family 20 415 6.4E-131 T 11-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 IX88_08055 6a136a88cd20f3d8949f2ad5628bd3e6 208 SUPERFAMILY SSF47616 72 202 1.25E-23 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IX88_08055 6a136a88cd20f3d8949f2ad5628bd3e6 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 113 196 5.1E-5 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal IX88_08055 6a136a88cd20f3d8949f2ad5628bd3e6 208 SUPERFAMILY SSF52833 1 85 1.79E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_08055 6a136a88cd20f3d8949f2ad5628bd3e6 208 Gene3D G3DSA:1.20.1050.10 85 203 5.2E-42 T 11-10-2018 IX88_08055 6a136a88cd20f3d8949f2ad5628bd3e6 208 Gene3D G3DSA:3.40.30.10 1 83 4.7E-33 T 11-10-2018 IX88_08055 6a136a88cd20f3d8949f2ad5628bd3e6 208 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 75 8.3E-14 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 IX88_12325 352a5e2973d0fb04185ef368554c2b54 432 Gene3D G3DSA:3.30.1490.100 253 366 2.4E-5 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IX88_12325 352a5e2973d0fb04185ef368554c2b54 432 Pfam PF13438 Domain of unknown function (DUF4113) 381 429 2.5E-7 T 11-10-2018 IPR025188 Domain of unknown function DUF4113 IX88_12325 352a5e2973d0fb04185ef368554c2b54 432 SUPERFAMILY SSF56672 7 246 2.13E-63 T 11-10-2018 IX88_12325 352a5e2973d0fb04185ef368554c2b54 432 Pfam PF11799 impB/mucB/samB family C-terminal domain 250 365 1.4E-14 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IX88_12325 352a5e2973d0fb04185ef368554c2b54 432 Gene3D G3DSA:2.30.40.20 16 79 8.6E-41 T 11-10-2018 IX88_12325 352a5e2973d0fb04185ef368554c2b54 432 Gene3D G3DSA:1.10.150.20 188 241 2.1E-9 T 11-10-2018 IX88_12325 352a5e2973d0fb04185ef368554c2b54 432 SUPERFAMILY SSF100879 254 356 4.19E-5 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IX88_12325 352a5e2973d0fb04185ef368554c2b54 432 Pfam PF00817 impB/mucB/samB family 11 158 1.1E-36 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 IX88_12325 352a5e2973d0fb04185ef368554c2b54 432 Gene3D G3DSA:3.30.70.270 10 164 8.6E-41 T 11-10-2018 IX88_02615 efae61fed6cadb0cc3d7e418ca05b5fe 367 SUPERFAMILY SSF53756 5 366 5.89E-76 T 11-10-2018 IX88_02615 efae61fed6cadb0cc3d7e418ca05b5fe 367 Pfam PF13439 Glycosyltransferase Family 4 13 166 2.3E-19 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 IX88_02615 efae61fed6cadb0cc3d7e418ca05b5fe 367 Gene3D G3DSA:3.40.50.2000 163 352 1.7E-70 T 11-10-2018 IX88_02615 efae61fed6cadb0cc3d7e418ca05b5fe 367 Pfam PF00534 Glycosyl transferases group 1 182 326 7.8E-30 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 IX88_02615 efae61fed6cadb0cc3d7e418ca05b5fe 367 Gene3D G3DSA:3.40.50.2000 22 365 1.7E-70 T 11-10-2018 IX88_08040 86aef5858b31a83d92663bf40d493fbe 411 SUPERFAMILY SSF51556 53 363 1.46E-71 T 11-10-2018 IPR032466 Metal-dependent hydrolase IX88_08040 86aef5858b31a83d92663bf40d493fbe 411 Gene3D G3DSA:2.30.40.10 10 409 8.9E-84 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 IX88_08040 86aef5858b31a83d92663bf40d493fbe 411 Gene3D G3DSA:3.20.20.140 53 364 8.9E-84 T 11-10-2018 IX88_08040 86aef5858b31a83d92663bf40d493fbe 411 SUPERFAMILY SSF51338 5 409 3.64E-11 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 IX88_14460 68267144ee4aa850e752041b1c3d8358 231 Gene3D G3DSA:2.40.30.70 11 138 3.7E-46 T 11-10-2018 IPR036414 YaeB, N-terminal domain superfamily IX88_14460 68267144ee4aa850e752041b1c3d8358 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 3 141 1.2E-37 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain IX88_14460 68267144ee4aa850e752041b1c3d8358 231 SUPERFAMILY SSF118196 2 222 1.96E-67 T 11-10-2018 IPR036413 YaeB-like superfamily IX88_14460 68267144ee4aa850e752041b1c3d8358 231 Gene3D G3DSA:3.30.2310.10 139 223 4.5E-14 T 11-10-2018 IX88_14460 68267144ee4aa850e752041b1c3d8358 231 Pfam PF01980 Uncharacterised protein family UPF0066 9 135 2.9E-40 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain IX88_08590 866f6188fed6d682fcce822f062a9823 231 Gene3D G3DSA:3.40.50.1820 1 229 5.8E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_08590 866f6188fed6d682fcce822f062a9823 231 Pfam PF12697 Alpha/beta hydrolase family 7 220 4.2E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_08590 866f6188fed6d682fcce822f062a9823 231 SUPERFAMILY SSF53474 3 225 2.1E-26 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_07945 757d61355fea375f34907e2bcc5f4770 84 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 56 2.2E-29 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 IX88_07945 757d61355fea375f34907e2bcc5f4770 84 Gene3D G3DSA:3.30.70.1680 1 59 1.2E-28 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 IX88_07945 757d61355fea375f34907e2bcc5f4770 84 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 1.0E-20 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 IX88_07945 757d61355fea375f34907e2bcc5f4770 84 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 64 17.498 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 IX88_07945 757d61355fea375f34907e2bcc5f4770 84 Pfam PF02599 Global regulator protein family 1 52 1.0E-26 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 IX88_07945 757d61355fea375f34907e2bcc5f4770 84 SUPERFAMILY SSF117130 1 54 3.4E-20 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 IX88_13340 174ca5b2d7ade7ee36a139e0a2ca4709 187 SUPERFAMILY SSF51905 20 186 4.53E-11 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07405 a83719cc0f46de00b390eca2e255a427 88 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 42 80 1.6E-7 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA IX88_16400 a83719cc0f46de00b390eca2e255a427 88 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 42 80 1.6E-7 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA IX88_08155 d547d33ee82bb83820cbcdc23fb209eb 64 SUPERFAMILY SSF55008 2 62 4.58E-16 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 IX88_08155 d547d33ee82bb83820cbcdc23fb209eb 64 ProSitePatterns PS01047 Heavy-metal-associated domain. 5 34 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 IX88_08155 d547d33ee82bb83820cbcdc23fb209eb 64 Pfam PF00403 Heavy-metal-associated domain 4 58 8.2E-13 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 IX88_08155 d547d33ee82bb83820cbcdc23fb209eb 64 Gene3D G3DSA:3.30.70.100 1 61 3.9E-18 T 11-10-2018 IX88_03840 61c02af8bf4b7f6e87afa4166f34fb64 176 Gene3D G3DSA:3.90.1720.10 58 174 2.0E-30 T 11-10-2018 IX88_07575 3ca03a9db880697052529d1fe88f59a4 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 1.9E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_07575 3ca03a9db880697052529d1fe88f59a4 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.3E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_07575 3ca03a9db880697052529d1fe88f59a4 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.3E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_07575 3ca03a9db880697052529d1fe88f59a4 192 SUPERFAMILY SSF48498 80 184 3.96E-9 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_07575 3ca03a9db880697052529d1fe88f59a4 192 Gene3D G3DSA:1.10.357.10 2 189 2.8E-35 T 11-10-2018 IX88_07575 3ca03a9db880697052529d1fe88f59a4 192 SUPERFAMILY SSF46689 7 85 1.49E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_01085 9b3de7baeda68a17c3b8964be22a1e89 256 Pfam PF08861 Domain of unknown function DUF1828 33 120 4.9E-16 T 11-10-2018 IPR014960 Domain of unknown function DUF1828 IX88_11085 31719826e242e06b9ae977f00264090e 294 SUPERFAMILY SSF53271 14 130 2.89E-10 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like IX88_11085 31719826e242e06b9ae977f00264090e 294 SUPERFAMILY SSF53271 159 281 6.56E-19 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like IX88_11085 31719826e242e06b9ae977f00264090e 294 Pfam PF00156 Phosphoribosyl transferase domain 153 255 4.6E-10 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 IX88_11085 31719826e242e06b9ae977f00264090e 294 SMART SM01400 1 105 8.9E-4 T 11-10-2018 IX88_11085 31719826e242e06b9ae977f00264090e 294 Gene3D G3DSA:3.40.50.2020 150 289 8.2E-24 T 11-10-2018 IX88_11085 31719826e242e06b9ae977f00264090e 294 Gene3D G3DSA:3.40.50.2020 8 143 2.4E-12 T 11-10-2018 IX88_07640 b957a153fb95e7ab3f397c03a7cd622a 241 SMART SM00671 190 225 4.0E-8 T 11-10-2018 IPR006597 Sel1-like repeat IX88_07640 b957a153fb95e7ab3f397c03a7cd622a 241 SMART SM00671 81 116 35.0 T 11-10-2018 IPR006597 Sel1-like repeat IX88_07640 b957a153fb95e7ab3f397c03a7cd622a 241 SMART SM00671 117 152 3.8E-8 T 11-10-2018 IPR006597 Sel1-like repeat IX88_07640 b957a153fb95e7ab3f397c03a7cd622a 241 SMART SM00671 153 188 1.9E-8 T 11-10-2018 IPR006597 Sel1-like repeat IX88_07640 b957a153fb95e7ab3f397c03a7cd622a 241 SMART SM00671 44 80 5.2E-9 T 11-10-2018 IPR006597 Sel1-like repeat IX88_07640 b957a153fb95e7ab3f397c03a7cd622a 241 SUPERFAMILY SSF81901 100 233 2.22E-32 T 11-10-2018 IX88_07640 b957a153fb95e7ab3f397c03a7cd622a 241 Pfam PF08238 Sel1 repeat 196 225 3.0E-6 T 11-10-2018 IPR006597 Sel1-like repeat IX88_07640 b957a153fb95e7ab3f397c03a7cd622a 241 Pfam PF08238 Sel1 repeat 154 184 6.7E-9 T 11-10-2018 IPR006597 Sel1-like repeat IX88_07640 b957a153fb95e7ab3f397c03a7cd622a 241 Pfam PF08238 Sel1 repeat 45 79 6.7E-10 T 11-10-2018 IPR006597 Sel1-like repeat IX88_07640 b957a153fb95e7ab3f397c03a7cd622a 241 Pfam PF08238 Sel1 repeat 119 152 1.2E-6 T 11-10-2018 IPR006597 Sel1-like repeat IX88_07640 b957a153fb95e7ab3f397c03a7cd622a 241 SUPERFAMILY SSF81901 34 106 9.94E-14 T 11-10-2018 IX88_07640 b957a153fb95e7ab3f397c03a7cd622a 241 Gene3D G3DSA:1.25.40.10 188 238 4.3E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_07640 b957a153fb95e7ab3f397c03a7cd622a 241 Gene3D G3DSA:1.25.40.10 97 187 6.2E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_07640 b957a153fb95e7ab3f397c03a7cd622a 241 Gene3D G3DSA:1.25.40.10 16 96 4.7E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_04155 e7c654e96457cdd0c4c6aad3db30cc3b 112 Pfam PF01588 Putative tRNA binding domain 14 110 1.3E-13 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 IX88_04155 e7c654e96457cdd0c4c6aad3db30cc3b 112 Gene3D G3DSA:2.40.50.140 1 112 8.5E-32 T 11-10-2018 IX88_04155 e7c654e96457cdd0c4c6aad3db30cc3b 112 SUPERFAMILY SSF50249 4 111 7.43E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_04155 e7c654e96457cdd0c4c6aad3db30cc3b 112 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 6 111 9.1E-49 T 11-10-2018 IPR008231 Probable chaperone CsaA IX88_10230 60e3fc2c7747caf5ed95a26d2482792e 522 SUPERFAMILY SSF53254 31 502 1.95E-48 T 11-10-2018 IPR029033 Histidine phosphatase superfamily IX88_10230 60e3fc2c7747caf5ed95a26d2482792e 522 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 69 488 3.0E-11 T 11-10-2018 IPR000560 Histidine phosphatase superfamily, clade-2 IX88_08610 4643988b3e50f743fb441890cd455e50 438 SUPERFAMILY SSF103473 13 434 5.62E-83 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_08610 4643988b3e50f743fb441890cd455e50 438 Pfam PF07690 Major Facilitator Superfamily 31 395 2.5E-49 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_08610 4643988b3e50f743fb441890cd455e50 438 Gene3D G3DSA:1.20.1250.20 9 437 3.4E-82 T 11-10-2018 IX88_05500 503bcab358ccdd1791fae0577d95da11 331 Pfam PF01545 Cation efflux family 159 326 3.6E-12 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 IX88_05500 503bcab358ccdd1791fae0577d95da11 331 SUPERFAMILY SSF161111 152 326 6.15E-30 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily IX88_05500 503bcab358ccdd1791fae0577d95da11 331 Gene3D G3DSA:1.20.1510.10 208 329 7.8E-6 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily IX88_05500 503bcab358ccdd1791fae0577d95da11 331 SUPERFAMILY SSF55008 63 125 1.44E-6 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 IX88_05820 336fd5b7ec4ef003f58f368f7f7bbbe1 295 Pfam PF03466 LysR substrate binding domain 92 292 1.9E-52 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_05820 336fd5b7ec4ef003f58f368f7f7bbbe1 295 SUPERFAMILY SSF46785 1 111 1.58E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_05820 336fd5b7ec4ef003f58f368f7f7bbbe1 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_05820 336fd5b7ec4ef003f58f368f7f7bbbe1 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_05820 336fd5b7ec4ef003f58f368f7f7bbbe1 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_05820 336fd5b7ec4ef003f58f368f7f7bbbe1 295 Gene3D G3DSA:3.40.190.290 92 294 9.5E-43 T 11-10-2018 IX88_05820 336fd5b7ec4ef003f58f368f7f7bbbe1 295 SUPERFAMILY SSF53850 93 292 1.3E-46 T 11-10-2018 IX88_05820 336fd5b7ec4ef003f58f368f7f7bbbe1 295 Gene3D G3DSA:1.10.10.10 1 86 5.8E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_05820 336fd5b7ec4ef003f58f368f7f7bbbe1 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 8.4E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_06300 cd041b96e5d5fa8b7484318dcdabb56c 441 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 150 213 9.0E-4 T 11-10-2018 IX88_06300 cd041b96e5d5fa8b7484318dcdabb56c 441 Pfam PF12787 EcsC protein family 78 319 6.2E-20 T 11-10-2018 IPR024787 EcsC protein IX88_13015 efbc2c3b4f7044cbba9891a45953ead4 275 Pfam PF02110 Hydroxyethylthiazole kinase family 17 258 4.3E-64 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 IX88_13015 efbc2c3b4f7044cbba9891a45953ead4 275 PIRSF PIRSF000513 9 271 4.4E-72 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 IX88_13015 efbc2c3b4f7044cbba9891a45953ead4 275 Gene3D G3DSA:3.40.1190.20 1 271 8.1E-78 T 11-10-2018 IPR029056 Ribokinase-like IX88_13015 efbc2c3b4f7044cbba9891a45953ead4 275 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 17 263 27.385 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 IX88_13015 efbc2c3b4f7044cbba9891a45953ead4 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 36 57 1.6E-24 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 IX88_13015 efbc2c3b4f7044cbba9891a45953ead4 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 23 30 1.6E-24 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 IX88_13015 efbc2c3b4f7044cbba9891a45953ead4 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 124 138 1.6E-24 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 IX88_13015 efbc2c3b4f7044cbba9891a45953ead4 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 67 75 1.6E-24 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 IX88_13015 efbc2c3b4f7044cbba9891a45953ead4 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 167 184 1.6E-24 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 IX88_13015 efbc2c3b4f7044cbba9891a45953ead4 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 93 110 1.6E-24 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 IX88_13015 efbc2c3b4f7044cbba9891a45953ead4 275 SUPERFAMILY SSF53613 11 268 1.96E-49 T 11-10-2018 IPR029056 Ribokinase-like IX88_04765 2321dc4751db508998eb56aaefc4a6a4 339 SUPERFAMILY SSF51445 3 311 3.79E-78 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily IX88_04765 2321dc4751db508998eb56aaefc4a6a4 339 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 11-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 IX88_04765 2321dc4751db508998eb56aaefc4a6a4 339 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 4 337 48.259 T 11-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 IX88_04765 2321dc4751db508998eb56aaefc4a6a4 339 Gene3D G3DSA:3.20.20.300 1 337 5.5E-110 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 IX88_04765 2321dc4751db508998eb56aaefc4a6a4 339 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 301 1.2E-72 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 214 233 7.3E-24 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 199 208 7.3E-24 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 156 163 7.3E-24 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 239 248 7.3E-24 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 139 151 7.3E-24 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 303 311 7.3E-24 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 Pfam PF00175 Oxidoreductase NAD-binding domain 215 317 2.3E-23 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 Gene3D G3DSA:3.10.20.30 1 102 1.4E-31 T 11-10-2018 IPR012675 Beta-grasp domain superfamily IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 156 163 3.8E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 214 233 3.8E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 303 311 3.8E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 SUPERFAMILY SSF63380 78 207 1.56E-24 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 SUPERFAMILY SSF54292 9 100 5.64E-28 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 Gene3D G3DSA:3.40.50.80 203 335 3.1E-38 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 Pfam PF00970 Oxidoreductase FAD-binding domain 111 205 2.0E-20 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 88 9.0E-17 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 Gene3D G3DSA:2.40.30.10 103 202 5.6E-25 T 11-10-2018 IX88_08135 cc9f32a06b421b4ab9fbd9d9332fd975 338 SUPERFAMILY SSF52343 193 333 1.44E-34 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_07565 ae4c115d6bf2c5e329e4d08134645bb3 389 Pfam PF09588 YqaJ-like viral recombinase domain 81 222 2.0E-34 T 11-10-2018 IPR019080 YqaJ viral recombinase IX88_07565 ae4c115d6bf2c5e329e4d08134645bb3 389 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 77 232 2.3E-37 T 11-10-2018 IPR017482 Putative phage-type endonuclease IX88_07565 ae4c115d6bf2c5e329e4d08134645bb3 389 SUPERFAMILY SSF52980 80 265 4.08E-30 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 IX88_07565 ae4c115d6bf2c5e329e4d08134645bb3 389 Gene3D G3DSA:3.90.320.10 77 284 7.6E-37 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal IX88_16010 82f7b9593274a47ceb7cf47b11fe743b 323 PIRSF PIRSF500210 1 323 7.8E-122 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 IX88_16010 82f7b9593274a47ceb7cf47b11fe743b 323 SUPERFAMILY SSF56655 5 323 2.54E-109 T 11-10-2018 IX88_16010 82f7b9593274a47ceb7cf47b11fe743b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 63 89 5.3E-66 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 IX88_16010 82f7b9593274a47ceb7cf47b11fe743b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 140 163 5.3E-66 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 IX88_16010 82f7b9593274a47ceb7cf47b11fe743b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 197 224 5.3E-66 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 IX88_16010 82f7b9593274a47ceb7cf47b11fe743b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 299 323 5.3E-66 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 IX88_16010 82f7b9593274a47ceb7cf47b11fe743b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 26 53 5.3E-66 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 IX88_16010 82f7b9593274a47ceb7cf47b11fe743b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 171 194 5.3E-66 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 IX88_16010 82f7b9593274a47ceb7cf47b11fe743b 323 PIRSF PIRSF000904 1 323 4.6E-120 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 IX88_16010 82f7b9593274a47ceb7cf47b11fe743b 323 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 11 186 2.8E-59 T 11-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 IX88_16010 82f7b9593274a47ceb7cf47b11fe743b 323 Gene3D G3DSA:3.40.190.80 188 323 8.0E-51 T 11-10-2018 IX88_16010 82f7b9593274a47ceb7cf47b11fe743b 323 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 323 44.474 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 IX88_16010 82f7b9593274a47ceb7cf47b11fe743b 323 Gene3D G3DSA:3.30.540.10 2 187 6.2E-66 T 11-10-2018 IX88_09180 ed6bc48b39de40fde89897a2f5fc5698 293 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 12 274 2.2E-64 T 11-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 IX88_09180 ed6bc48b39de40fde89897a2f5fc5698 293 SUPERFAMILY SSF51197 9 282 6.87E-90 T 11-10-2018 IX88_09180 ed6bc48b39de40fde89897a2f5fc5698 293 Gene3D G3DSA:3.60.130.10 5 285 3.1E-90 T 11-10-2018 IX88_06000 2cf3143f9b183e5e1f8b9d548c030352 415 Pfam PF07690 Major Facilitator Superfamily 42 248 2.8E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_06000 2cf3143f9b183e5e1f8b9d548c030352 415 SUPERFAMILY SSF103473 40 411 3.92E-39 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_06000 2cf3143f9b183e5e1f8b9d548c030352 415 Gene3D G3DSA:1.20.1250.20 38 218 1.1E-17 T 11-10-2018 IX88_06000 2cf3143f9b183e5e1f8b9d548c030352 415 Gene3D G3DSA:1.20.1250.20 230 411 2.3E-20 T 11-10-2018 IX88_09665 3b0c17de3af44aa3c216d3ef86cf5f6b 496 Pfam PF00474 Sodium:solute symporter family 35 437 2.5E-132 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 IX88_09665 3b0c17de3af44aa3c216d3ef86cf5f6b 496 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 4.8E-123 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 IX88_09665 3b0c17de3af44aa3c216d3ef86cf5f6b 496 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site IX88_09665 3b0c17de3af44aa3c216d3ef86cf5f6b 496 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site IX88_09665 3b0c17de3af44aa3c216d3ef86cf5f6b 496 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 492 6.1E-219 T 11-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 IX88_09665 3b0c17de3af44aa3c216d3ef86cf5f6b 496 Gene3D G3DSA:1.20.1730.10 24 495 5.7E-94 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily IX88_13045 d7f0a07e5b2f20c620b0a6d1bba239b6 396 Gene3D G3DSA:3.30.450.40 23 205 3.3E-37 T 11-10-2018 IPR029016 GAF-like domain superfamily IX88_13045 d7f0a07e5b2f20c620b0a6d1bba239b6 396 SUPERFAMILY SSF46894 218 282 2.83E-5 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 IX88_13045 d7f0a07e5b2f20c620b0a6d1bba239b6 396 Gene3D G3DSA:1.25.40.10 286 390 5.9E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_13045 d7f0a07e5b2f20c620b0a6d1bba239b6 396 SMART SM00862 226 291 0.0093 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 IX88_05290 60e0abfd845f1fadfc48eb56d33b2cd4 143 Pfam PF02566 OsmC-like protein 45 138 1.8E-16 T 11-10-2018 IPR003718 OsmC/Ohr family IX88_05290 60e0abfd845f1fadfc48eb56d33b2cd4 143 Gene3D G3DSA:3.30.300.20 48 141 2.7E-31 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta IX88_05290 60e0abfd845f1fadfc48eb56d33b2cd4 143 Gene3D G3DSA:2.20.25.10 1 47 3.0E-22 T 11-10-2018 IX88_05290 60e0abfd845f1fadfc48eb56d33b2cd4 143 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 1.8E-53 T 11-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 IX88_05290 60e0abfd845f1fadfc48eb56d33b2cd4 143 SUPERFAMILY SSF82784 1 140 3.27E-44 T 11-10-2018 IPR036102 OsmC/Ohr superfamily IX88_14700 7dabbab2863949f51a9821d60f4cecaa 252 Gene3D G3DSA:3.40.1390.30 98 223 3.0E-83 T 11-10-2018 IX88_14700 7dabbab2863949f51a9821d60f4cecaa 252 Gene3D G3DSA:3.40.1390.30 7 239 3.0E-83 T 11-10-2018 IX88_14700 7dabbab2863949f51a9821d60f4cecaa 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 240 2.2E-64 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 IX88_14700 7dabbab2863949f51a9821d60f4cecaa 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 2 250 3.2E-62 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 IX88_14700 7dabbab2863949f51a9821d60f4cecaa 252 SUPERFAMILY SSF102705 1 251 8.11E-79 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily IX88_04215 90f68118ecc89971b35c2a183225eb3e 210 SUPERFAMILY SSF53335 16 160 4.13E-11 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_04215 90f68118ecc89971b35c2a183225eb3e 210 Gene3D G3DSA:3.40.50.150 2 196 9.4E-26 T 11-10-2018 IX88_04215 90f68118ecc89971b35c2a183225eb3e 210 Pfam PF02390 Putative methyltransferase 23 176 5.7E-18 T 11-10-2018 IX88_08820 8f9954b5f678c178f617b2eab46445ec 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 4.1E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_08820 8f9954b5f678c178f617b2eab46445ec 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 4.1E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_08820 8f9954b5f678c178f617b2eab46445ec 205 SUPERFAMILY SSF46689 8 89 4.24E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_08820 8f9954b5f678c178f617b2eab46445ec 205 SUPERFAMILY SSF48498 87 182 3.91E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_08820 8f9954b5f678c178f617b2eab46445ec 205 Gene3D G3DSA:1.10.357.10 10 200 5.7E-33 T 11-10-2018 IX88_08820 8f9954b5f678c178f617b2eab46445ec 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 2.0E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_09850 2deb585f61e9ba69f073583917cec2ae 198 Gene3D G3DSA:3.30.479.10 1 144 8.3E-23 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 IX88_09850 2deb585f61e9ba69f073583917cec2ae 198 SUPERFAMILY SSF55620 1 145 6.12E-31 T 11-10-2018 IX88_09850 2deb585f61e9ba69f073583917cec2ae 198 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 143 6.3E-26 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 IX88_07165 010229e268212abd17d2e861db0c20d4 258 PIRSF PIRSF006157 1 258 2.7E-83 T 11-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 IX88_07165 010229e268212abd17d2e861db0c20d4 258 SUPERFAMILY SSF53213 6 258 5.49E-84 T 11-10-2018 IX88_07165 010229e268212abd17d2e861db0c20d4 258 Gene3D G3DSA:3.40.830.10 2 258 2.0E-85 T 11-10-2018 IX88_07165 010229e268212abd17d2e861db0c20d4 258 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 257 2.3E-42 T 11-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 IX88_04980 7167fce720ca94bd4ca91883d31dd24e 157 SUPERFAMILY SSF55298 13 155 9.9E-37 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 IX88_04980 7167fce720ca94bd4ca91883d31dd24e 157 Gene3D G3DSA:3.30.1330.40 10 155 7.6E-39 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 IX88_04980 7167fce720ca94bd4ca91883d31dd24e 157 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 26 152 7.1E-19 T 11-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like IX88_15410 cd60b0064da9c61d449acda1e5f7c90b 728 Gene3D G3DSA:2.60.40.10 514 609 7.3E-15 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_15410 cd60b0064da9c61d449acda1e5f7c90b 728 Gene3D G3DSA:2.60.40.10 167 243 6.2E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_15410 cd60b0064da9c61d449acda1e5f7c90b 728 Gene3D G3DSA:2.60.40.10 252 330 2.3E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_15410 cd60b0064da9c61d449acda1e5f7c90b 728 Gene3D G3DSA:2.60.40.10 422 499 3.3E-14 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_15410 cd60b0064da9c61d449acda1e5f7c90b 728 Gene3D G3DSA:2.60.40.10 337 415 1.0E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_04375 e71d8db73f9c83146660bcf2594ff6ad 215 SUPERFAMILY SSF52016 2 204 6.28E-62 T 11-10-2018 IX88_04375 e71d8db73f9c83146660bcf2594ff6ad 215 Gene3D G3DSA:3.20.19.10 1 184 9.0E-78 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 IX88_04375 e71d8db73f9c83146660bcf2594ff6ad 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 7.8E-84 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 IX88_04375 e71d8db73f9c83146660bcf2594ff6ad 215 Pfam PF00694 Aconitase C-terminal domain 1 132 3.2E-37 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 IX88_04375 e71d8db73f9c83146660bcf2594ff6ad 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.572 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 IX88_12970 ae61c47990574be53b2e08538157a41b 253 SUPERFAMILY SSF51735 16 215 4.82E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_12970 ae61c47990574be53b2e08538157a41b 253 Gene3D G3DSA:3.40.50.720 11 253 8.7E-44 T 11-10-2018 IX88_12970 ae61c47990574be53b2e08538157a41b 253 Pfam PF00106 short chain dehydrogenase 14 196 2.3E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_00510 5feeae9292138b266ad60ffa00d08498 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 87 1.5E-21 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain IX88_00510 5feeae9292138b266ad60ffa00d08498 104 SUPERFAMILY SSF54909 1 99 2.19E-27 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel IX88_00510 5feeae9292138b266ad60ffa00d08498 104 Gene3D G3DSA:3.30.70.100 1 104 1.2E-30 T 11-10-2018 IX88_07540 c4f3a4bca98cb0ee09ffee4b5931904d 198 SUPERFAMILY SSF140931 41 195 2.75E-36 T 11-10-2018 IPR036597 Fido-like domain superfamily IX88_07540 c4f3a4bca98cb0ee09ffee4b5931904d 198 Gene3D G3DSA:1.10.3290.10 5 198 1.0E-58 T 11-10-2018 IPR036597 Fido-like domain superfamily IX88_07540 c4f3a4bca98cb0ee09ffee4b5931904d 198 Pfam PF02661 Fic/DOC family 54 153 4.0E-18 T 11-10-2018 IPR003812 Fido domain IX88_03430 70935016acecc196012c6137053b1398 271 Gene3D G3DSA:3.40.30.10 120 271 6.9E-40 T 11-10-2018 IX88_03430 70935016acecc196012c6137053b1398 271 Gene3D G3DSA:3.10.450.70 57 119 9.3E-8 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 IX88_03430 70935016acecc196012c6137053b1398 271 SUPERFAMILY SSF54423 66 117 9.16E-10 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 IX88_03430 70935016acecc196012c6137053b1398 271 SUPERFAMILY SSF52833 130 271 1.68E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_03430 70935016acecc196012c6137053b1398 271 Pfam PF10411 Disulfide bond isomerase protein N-terminus 62 115 3.9E-14 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal IX88_03430 70935016acecc196012c6137053b1398 271 Pfam PF13098 Thioredoxin-like domain 150 269 1.1E-25 T 11-10-2018 IPR012336 Thioredoxin-like fold IX88_13355 c17717b7ee9ae2562dd29e77040e242b 609 Gene3D G3DSA:3.20.20.370 26 291 8.6E-61 T 11-10-2018 IX88_13355 c17717b7ee9ae2562dd29e77040e242b 609 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 38 397 4.7E-105 T 11-10-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0043708 IX88_13355 c17717b7ee9ae2562dd29e77040e242b 609 Pfam PF01522 Polysaccharide deacetylase 92 254 3.1E-23 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 IX88_13355 c17717b7ee9ae2562dd29e77040e242b 609 Gene3D G3DSA:3.20.20.80 301 419 7.0E-22 T 11-10-2018 IX88_13355 c17717b7ee9ae2562dd29e77040e242b 609 SUPERFAMILY SSF88713 56 257 5.0E-31 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 IX88_13355 c17717b7ee9ae2562dd29e77040e242b 609 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 313 396 1.2E-12 T 11-10-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal IX88_08230 c9ff74884a88c1205c09c8c5bdb13898 181 Pfam PF05838 Glycosyl hydrolase 108 8 90 1.3E-23 T 11-10-2018 IPR008565 Protein of unknown function DUF847 IX88_08230 c9ff74884a88c1205c09c8c5bdb13898 181 Gene3D G3DSA:1.20.141.10 2 181 2.5E-38 T 11-10-2018 IX88_08230 c9ff74884a88c1205c09c8c5bdb13898 181 Pfam PF09374 Predicted Peptidoglycan domain 97 178 9.0E-15 T 11-10-2018 IPR018537 Peptidoglycan binding domain IX88_08230 c9ff74884a88c1205c09c8c5bdb13898 181 SUPERFAMILY SSF53955 1 179 2.0E-42 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily IX88_08370 880edc9d3f86fc8fff6e51ad1ae217a8 222 Pfam PF01596 O-methyltransferase 29 185 5.8E-39 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 IX88_08370 880edc9d3f86fc8fff6e51ad1ae217a8 222 Gene3D G3DSA:3.40.50.150 1 222 3.9E-64 T 11-10-2018 IX88_08370 880edc9d3f86fc8fff6e51ad1ae217a8 222 SUPERFAMILY SSF53335 4 221 8.44E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_02175 fe8f46ebd836d16101a0905cd7163ef8 185 Pfam PF09335 SNARE associated Golgi protein 45 171 1.9E-22 T 11-10-2018 IPR032816 SNARE associated Golgi protein IX88_00480 7b4ccbcc58ee9918a676074282f2c0ca 372 Pfam PF01594 AI-2E family transporter 12 344 2.0E-44 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like IX88_09305 9e568a39d2d0f0fa948f1e9f684b77b7 281 SUPERFAMILY SSF46689 194 227 4.84E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_09305 9e568a39d2d0f0fa948f1e9f684b77b7 281 Gene3D G3DSA:1.10.10.60 181 236 1.3E-15 T 11-10-2018 IX88_09305 9e568a39d2d0f0fa948f1e9f684b77b7 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 3.0E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_09305 9e568a39d2d0f0fa948f1e9f684b77b7 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 3.0E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_09305 9e568a39d2d0f0fa948f1e9f684b77b7 281 SUPERFAMILY SSF46689 231 276 2.8E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_09305 9e568a39d2d0f0fa948f1e9f684b77b7 281 Pfam PF12833 Helix-turn-helix domain 200 276 7.8E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_09305 9e568a39d2d0f0fa948f1e9f684b77b7 281 Pfam PF02311 AraC-like ligand binding domain 25 108 1.0E-11 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 IX88_09305 9e568a39d2d0f0fa948f1e9f684b77b7 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 272 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 IX88_09305 9e568a39d2d0f0fa948f1e9f684b77b7 281 SUPERFAMILY SSF51215 8 163 2.62E-15 T 11-10-2018 IPR037923 Transcription regulator HTH-like IX88_09305 9e568a39d2d0f0fa948f1e9f684b77b7 281 Gene3D G3DSA:1.10.10.60 237 281 2.5E-12 T 11-10-2018 IX88_09305 9e568a39d2d0f0fa948f1e9f684b77b7 281 SMART SM00342 194 276 6.8E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_17680 f7da27c82f85ac511605e76df9189e61 356 Pfam PF06258 Mitochondrial fission ELM1 21 322 6.8E-23 T 11-10-2018 IPR009367 Mitochondrial fission protein ELM1-like IX88_17680 f7da27c82f85ac511605e76df9189e61 356 SUPERFAMILY SSF53756 21 321 7.85E-6 T 11-10-2018 IX88_04140 9e41ff08606021eb4185cf5769e0cee9 401 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 401 3.0E-144 T 11-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 IX88_04140 9e41ff08606021eb4185cf5769e0cee9 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 382 401 1.9E-30 T 11-10-2018 IPR003004 GspF/PilC family IX88_04140 9e41ff08606021eb4185cf5769e0cee9 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 65 77 1.9E-30 T 11-10-2018 IPR003004 GspF/PilC family IX88_04140 9e41ff08606021eb4185cf5769e0cee9 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 366 380 1.9E-30 T 11-10-2018 IPR003004 GspF/PilC family IX88_04140 9e41ff08606021eb4185cf5769e0cee9 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 163 191 1.9E-30 T 11-10-2018 IPR003004 GspF/PilC family IX88_04140 9e41ff08606021eb4185cf5769e0cee9 401 Gene3D G3DSA:1.20.81.30 55 170 2.5E-27 T 11-10-2018 IX88_04140 9e41ff08606021eb4185cf5769e0cee9 401 Pfam PF00482 Type II secretion system (T2SS), protein F 271 393 3.6E-29 T 11-10-2018 IPR018076 Type II secretion system F domain IX88_04140 9e41ff08606021eb4185cf5769e0cee9 401 Pfam PF00482 Type II secretion system (T2SS), protein F 70 191 8.9E-29 T 11-10-2018 IPR018076 Type II secretion system F domain IX88_04140 9e41ff08606021eb4185cf5769e0cee9 401 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 163 191 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 IX88_04140 9e41ff08606021eb4185cf5769e0cee9 401 Gene3D G3DSA:1.20.81.30 254 363 2.0E-26 T 11-10-2018 IX88_15755 6cd80cc380f8f91e86f1c01c66793933 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 29 141 3.5E-20 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 IX88_15755 6cd80cc380f8f91e86f1c01c66793933 145 Pfam PF03061 Thioesterase superfamily 57 133 7.7E-9 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 IX88_15755 6cd80cc380f8f91e86f1c01c66793933 145 Gene3D G3DSA:3.10.129.10 5 145 8.9E-37 T 11-10-2018 IX88_15755 6cd80cc380f8f91e86f1c01c66793933 145 SUPERFAMILY SSF54637 5 141 1.5E-35 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_00335 b453963cc61dfd905ae1394f2b6ba8a9 84 Pfam PF04024 PspC domain 6 63 8.9E-21 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal IX88_05210 34a60034398a77e6297cbc323fc41c68 326 Pfam PF01409 tRNA synthetases class II core domain (F) 91 325 2.5E-104 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 IX88_05210 34a60034398a77e6297cbc323fc41c68 326 Gene3D G3DSA:3.30.930.10 7 326 4.2E-121 T 11-10-2018 IX88_05210 34a60034398a77e6297cbc323fc41c68 326 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 7 325 47.244 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 IX88_05210 34a60034398a77e6297cbc323fc41c68 326 SUPERFAMILY SSF55681 91 325 9.4E-82 T 11-10-2018 IX88_05210 34a60034398a77e6297cbc323fc41c68 326 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 18 86 1.3E-19 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 IX88_05210 34a60034398a77e6297cbc323fc41c68 326 SUPERFAMILY SSF46589 11 98 1.05E-19 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 IX88_05210 34a60034398a77e6297cbc323fc41c68 326 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 325 2.7E-109 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 IX88_06815 9cf01fb827dca697d3f076f3292dc593 440 SUPERFAMILY SSF52091 327 398 2.55E-7 T 11-10-2018 IPR036513 STAS domain superfamily IX88_06815 9cf01fb827dca697d3f076f3292dc593 440 Gene3D G3DSA:3.40.710.10 1 306 1.9E-119 T 11-10-2018 IX88_06815 9cf01fb827dca697d3f076f3292dc593 440 TIGRFAM TIGR03814 Gln_ase: glutaminase A 17 303 2.0E-101 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 IX88_06815 9cf01fb827dca697d3f076f3292dc593 440 SUPERFAMILY SSF56601 4 304 8.03E-109 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like IX88_06815 9cf01fb827dca697d3f076f3292dc593 440 Hamap MF_00313 Glutaminase [glsA]. 5 304 40.218 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 IX88_06815 9cf01fb827dca697d3f076f3292dc593 440 Gene3D G3DSA:3.30.750.24 310 404 4.9E-22 T 11-10-2018 IPR036513 STAS domain superfamily IX88_06815 9cf01fb827dca697d3f076f3292dc593 440 Pfam PF04960 Glutaminase 22 303 2.5E-113 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 IX88_05115 4f591f2830730a4aeef1371623db312a 136 SUPERFAMILY SSF47781 73 133 7.34E-26 T 11-10-2018 IPR010994 RuvA domain 2-like IX88_05115 4f591f2830730a4aeef1371623db312a 136 SMART SM00278 84 103 0.021 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 IX88_05115 4f591f2830730a4aeef1371623db312a 136 SMART SM00278 114 133 92.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 IX88_05115 4f591f2830730a4aeef1371623db312a 136 Gene3D G3DSA:1.10.150.280 64 135 1.4E-21 T 11-10-2018 IX88_05115 4f591f2830730a4aeef1371623db312a 136 Pfam PF12836 Helix-hairpin-helix motif 73 134 1.6E-21 T 11-10-2018 IX88_05115 4f591f2830730a4aeef1371623db312a 136 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 74 135 1.2E-22 T 11-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain IX88_16875 05b267184c14e8f0a7eab82eb66bbf9c 268 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 193 4.6E-4 T 11-10-2018 IX88_16875 05b267184c14e8f0a7eab82eb66bbf9c 268 SUPERFAMILY SSF51735 6 263 6.58E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_16875 05b267184c14e8f0a7eab82eb66bbf9c 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_16875 05b267184c14e8f0a7eab82eb66bbf9c 268 Pfam PF00106 short chain dehydrogenase 10 195 3.4E-51 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_16875 05b267184c14e8f0a7eab82eb66bbf9c 268 Gene3D G3DSA:3.40.50.720 1 268 2.5E-66 T 11-10-2018 IX88_16875 05b267184c14e8f0a7eab82eb66bbf9c 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_16875 05b267184c14e8f0a7eab82eb66bbf9c 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_16875 05b267184c14e8f0a7eab82eb66bbf9c 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_16875 05b267184c14e8f0a7eab82eb66bbf9c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.4E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_16875 05b267184c14e8f0a7eab82eb66bbf9c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.4E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_16875 05b267184c14e8f0a7eab82eb66bbf9c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.4E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_16875 05b267184c14e8f0a7eab82eb66bbf9c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.4E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_16875 05b267184c14e8f0a7eab82eb66bbf9c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.4E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_09940 0bd0bda196eca1824545d2cce05b4e74 238 PRINTS PR01374 Gram-negative bacterial tonB protein signature 155 176 5.5E-6 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 IX88_09940 0bd0bda196eca1824545d2cce05b4e74 238 PRINTS PR01374 Gram-negative bacterial tonB protein signature 176 194 5.5E-6 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 IX88_09940 0bd0bda196eca1824545d2cce05b4e74 238 PRINTS PR01374 Gram-negative bacterial tonB protein signature 69 79 5.5E-6 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 IX88_09940 0bd0bda196eca1824545d2cce05b4e74 238 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 160 235 1.1E-20 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 IX88_09940 0bd0bda196eca1824545d2cce05b4e74 238 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 161 236 1.1E-18 T 11-10-2018 IPR006260 TonB/TolA, C-terminal IX88_09940 0bd0bda196eca1824545d2cce05b4e74 238 SUPERFAMILY SSF74653 160 235 1.03E-20 T 11-10-2018 IX88_09940 0bd0bda196eca1824545d2cce05b4e74 238 Gene3D G3DSA:3.30.1150.10 108 238 4.1E-21 T 11-10-2018 IX88_07020 102548cc9a3d8ed5e72ea92c0101fbc8 302 Gene3D G3DSA:3.40.50.620 7 212 2.9E-64 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_07020 102548cc9a3d8ed5e72ea92c0101fbc8 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 57.154 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 IX88_07020 102548cc9a3d8ed5e72ea92c0101fbc8 302 SUPERFAMILY SSF52402 6 210 4.93E-74 T 11-10-2018 IX88_07020 102548cc9a3d8ed5e72ea92c0101fbc8 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 7.7E-65 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 IX88_07020 102548cc9a3d8ed5e72ea92c0101fbc8 302 PIRSF PIRSF002936 1 302 5.6E-158 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 IX88_07020 102548cc9a3d8ed5e72ea92c0101fbc8 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 6.5E-162 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 IX88_16455 e37ce7f2526354047f7ebe61f456c0b4 191 Pfam PF13430 Domain of unknown function (DUF4112) 19 118 1.7E-21 T 11-10-2018 IPR025187 Protein of unknown function DUF4112 IX88_14445 bfc319e302ca1187223620ed8e9661b0 119 Gene3D G3DSA:2.40.50.200 16 119 8.8E-28 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily IX88_14445 bfc319e302ca1187223620ed8e9661b0 119 Pfam PF04076 Bacterial OB fold (BOF) protein 31 118 2.4E-23 T 11-10-2018 IPR005220 Bacterial OB-fold IX88_14445 bfc319e302ca1187223620ed8e9661b0 119 SUPERFAMILY SSF101756 31 118 2.48E-25 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily IX88_04780 230f041e402526099c1d562bd2efa1a0 183 SUPERFAMILY SSF48317 9 175 1.15E-37 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily IX88_04780 230f041e402526099c1d562bd2efa1a0 183 Gene3D G3DSA:1.20.144.10 62 173 1.2E-20 T 11-10-2018 IX88_04780 230f041e402526099c1d562bd2efa1a0 183 SMART SM00014 63 173 4.4E-16 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase IX88_04780 230f041e402526099c1d562bd2efa1a0 183 Pfam PF01569 PAP2 superfamily 67 175 4.5E-22 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase IX88_09995 3335af2150c499b4a569546758a6f81f 285 PRINTS PR00377 Inositol monophosphatase superfamily signature 222 246 3.0E-9 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IX88_09995 3335af2150c499b4a569546758a6f81f 285 PRINTS PR00377 Inositol monophosphatase superfamily signature 92 108 3.0E-9 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IX88_09995 3335af2150c499b4a569546758a6f81f 285 PRINTS PR00377 Inositol monophosphatase superfamily signature 71 87 3.0E-9 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IX88_09995 3335af2150c499b4a569546758a6f81f 285 PRINTS PR00377 Inositol monophosphatase superfamily signature 49 69 3.0E-9 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IX88_09995 3335af2150c499b4a569546758a6f81f 285 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 12 267 35.403 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 IX88_09995 3335af2150c499b4a569546758a6f81f 285 Pfam PF00459 Inositol monophosphatase family 18 259 1.3E-37 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 IX88_09995 3335af2150c499b4a569546758a6f81f 285 Gene3D G3DSA:3.40.190.80 163 270 1.5E-25 T 11-10-2018 IX88_09995 3335af2150c499b4a569546758a6f81f 285 SUPERFAMILY SSF56655 11 278 7.33E-57 T 11-10-2018 IX88_09995 3335af2150c499b4a569546758a6f81f 285 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 92 105 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site IX88_09995 3335af2150c499b4a569546758a6f81f 285 Gene3D G3DSA:3.30.540.10 10 159 9.0E-33 T 11-10-2018 IX88_00755 d48e7ea4829a6b5b48360feef3e2d807 372 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_00755 d48e7ea4829a6b5b48360feef3e2d807 372 ProSitePatterns PS01348 MraY family signature 2. 201 212 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_00755 d48e7ea4829a6b5b48360feef3e2d807 372 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 372 1.6E-124 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_00755 d48e7ea4829a6b5b48360feef3e2d807 372 Pfam PF00953 Glycosyl transferase family 4 99 296 4.2E-33 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 IX88_00755 d48e7ea4829a6b5b48360feef3e2d807 372 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 370 23.39 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 IX88_01390 7fc0bb8f190466b669216f9abde67e04 121 Pfam PF03692 Putative zinc- or iron-chelating domain 10 89 1.1E-7 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein IX88_17285 b111ba700084b9e77f734a4e2e4c78ab 113 Gene3D G3DSA:2.30.29.80 1 113 5.1E-49 T 11-10-2018 IX88_17285 b111ba700084b9e77f734a4e2e4c78ab 113 Pfam PF07411 Domain of unknown function (DUF1508) 61 108 3.0E-21 T 11-10-2018 IPR010879 Domain of unknown function DUF1508 IX88_17285 b111ba700084b9e77f734a4e2e4c78ab 113 Pfam PF07411 Domain of unknown function (DUF1508) 11 57 9.9E-22 T 11-10-2018 IPR010879 Domain of unknown function DUF1508 IX88_17285 b111ba700084b9e77f734a4e2e4c78ab 113 SUPERFAMILY SSF160113 61 109 1.05E-16 T 11-10-2018 IPR036913 YegP-like superfamily IX88_17285 b111ba700084b9e77f734a4e2e4c78ab 113 SUPERFAMILY SSF160113 1 57 2.75E-19 T 11-10-2018 IPR036913 YegP-like superfamily IX88_09010 5d2e08b4c9580c866a2dcf1d7a6a563a 306 Pfam PF03466 LysR substrate binding domain 89 292 1.5E-41 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_09010 5d2e08b4c9580c866a2dcf1d7a6a563a 306 Gene3D G3DSA:1.10.10.10 3 89 2.7E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_09010 5d2e08b4c9580c866a2dcf1d7a6a563a 306 Gene3D G3DSA:3.40.190.10 163 266 1.6E-63 T 11-10-2018 IX88_09010 5d2e08b4c9580c866a2dcf1d7a6a563a 306 SUPERFAMILY SSF46785 3 111 6.05E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_09010 5d2e08b4c9580c866a2dcf1d7a6a563a 306 SUPERFAMILY SSF53850 89 298 1.86E-44 T 11-10-2018 IX88_09010 5d2e08b4c9580c866a2dcf1d7a6a563a 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.2E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_09010 5d2e08b4c9580c866a2dcf1d7a6a563a 306 Gene3D G3DSA:3.40.190.10 91 291 1.6E-63 T 11-10-2018 IX88_02770 4a05b2efc422e779b841740ea4c3c952 696 Gene3D G3DSA:2.40.170.20 170 696 8.8E-119 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IX88_02770 4a05b2efc422e779b841740ea4c3c952 696 Pfam PF00593 TonB dependent receptor 231 695 8.1E-59 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_02770 4a05b2efc422e779b841740ea4c3c952 696 Gene3D G3DSA:2.170.130.10 39 169 1.2E-24 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_02770 4a05b2efc422e779b841740ea4c3c952 696 SUPERFAMILY SSF56935 24 696 7.12E-126 T 11-10-2018 IX88_02770 4a05b2efc422e779b841740ea4c3c952 696 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 159 4.3E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_02770 4a05b2efc422e779b841740ea4c3c952 696 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 58 696 1.2E-104 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 IX88_13105 6f3dd565c2be4061d98dde9506035c62 168 Pfam PF17209 Hfq protein 7 68 8.9E-31 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 IX88_13105 6f3dd565c2be4061d98dde9506035c62 168 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.0E-29 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 IX88_13105 6f3dd565c2be4061d98dde9506035c62 168 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.6 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 IX88_13105 6f3dd565c2be4061d98dde9506035c62 168 Gene3D G3DSA:2.30.30.100 1 69 1.3E-31 T 11-10-2018 IX88_13105 6f3dd565c2be4061d98dde9506035c62 168 SUPERFAMILY SSF50182 7 67 3.07E-23 T 11-10-2018 IPR010920 LSM domain superfamily IX88_11290 5ab0923a18db7293c4a8edadb54c0808 480 SUPERFAMILY SSF50952 27 456 5.89E-55 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 IX88_11290 5ab0923a18db7293c4a8edadb54c0808 480 TIGRFAM TIGR03606 non_repeat_PQQ: dehydrogenase, PQQ-dependent, s-GDH family 23 480 8.8E-231 T 11-10-2018 IPR019893 PQQ-dependent dehydrogenase, s-GDH family KEGG: 00030+1.1.5.2|MetaCyc: PWY-7165 IX88_11290 5ab0923a18db7293c4a8edadb54c0808 480 Gene3D G3DSA:2.120.10.30 26 480 4.3E-180 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like IX88_11290 5ab0923a18db7293c4a8edadb54c0808 480 Pfam PF07995 Glucose / Sorbosone dehydrogenase 371 454 1.0E-9 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase IX88_11290 5ab0923a18db7293c4a8edadb54c0808 480 Pfam PF07995 Glucose / Sorbosone dehydrogenase 51 349 5.8E-51 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase IX88_01825 450d5c398e0dff0a9677294b84469348 191 SUPERFAMILY SSF51182 1 188 2.13E-54 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_01825 450d5c398e0dff0a9677294b84469348 191 Pfam PF05962 HutD 8 168 1.4E-44 T 11-10-2018 IPR010282 Uncharacterised protein family HutD/Ves IX88_01825 450d5c398e0dff0a9677294b84469348 191 Gene3D G3DSA:2.60.120.10 11 111 2.8E-56 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_01825 450d5c398e0dff0a9677294b84469348 191 Gene3D G3DSA:2.60.120.10 6 177 2.8E-56 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_11610 184610161eef865eed8e3d4557c5414c 451 ProSitePatterns PS00217 Sugar transport proteins signature 2. 127 152 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_11610 184610161eef865eed8e3d4557c5414c 451 ProSitePatterns PS00216 Sugar transport proteins signature 1. 85 101 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_11610 184610161eef865eed8e3d4557c5414c 451 Gene3D G3DSA:1.20.1250.20 304 442 5.6E-12 T 11-10-2018 IX88_11610 184610161eef865eed8e3d4557c5414c 451 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 14 415 2.6E-157 T 11-10-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0016021|GO:0022857|GO:0055085 IX88_11610 184610161eef865eed8e3d4557c5414c 451 Gene3D G3DSA:1.20.1250.20 25 303 1.6E-58 T 11-10-2018 IX88_11610 184610161eef865eed8e3d4557c5414c 451 SUPERFAMILY SSF103473 17 441 3.4E-81 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_11610 184610161eef865eed8e3d4557c5414c 451 Pfam PF07690 Major Facilitator Superfamily 36 408 1.2E-46 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_02505 eb054dea1a971cdbb68f2e15529f0e87 205 Gene3D G3DSA:3.40.30.10 24 205 2.6E-54 T 11-10-2018 IX88_02505 eb054dea1a971cdbb68f2e15529f0e87 205 PIRSF PIRSF001488 1 205 4.1E-51 T 11-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL IX88_02505 eb054dea1a971cdbb68f2e15529f0e87 205 SUPERFAMILY SSF52833 24 185 2.25E-42 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_02505 eb054dea1a971cdbb68f2e15529f0e87 205 Pfam PF01323 DSBA-like thioredoxin domain 89 187 7.6E-17 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 IX88_03645 b2d20d5cadba4f687b2b717b9e4e1856 142 Gene3D G3DSA:3.30.1550.10 2 72 2.2E-36 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily IX88_03645 b2d20d5cadba4f687b2b717b9e4e1856 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 6.6E-66 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_03645 b2d20d5cadba4f687b2b717b9e4e1856 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 141 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_03645 b2d20d5cadba4f687b2b717b9e4e1856 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 6.0E-32 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal IX88_03645 b2d20d5cadba4f687b2b717b9e4e1856 142 Gene3D G3DSA:1.10.10.250 73 141 6.6E-27 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily IX88_03645 b2d20d5cadba4f687b2b717b9e4e1856 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.168 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 IX88_03645 b2d20d5cadba4f687b2b717b9e4e1856 142 SMART SM00649 9 141 7.5E-86 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 IX88_03645 b2d20d5cadba4f687b2b717b9e4e1856 142 SUPERFAMILY SSF46906 68 141 3.01E-25 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily IX88_03645 b2d20d5cadba4f687b2b717b9e4e1856 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 3.1E-23 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 IX88_03645 b2d20d5cadba4f687b2b717b9e4e1856 142 SUPERFAMILY SSF54747 3 73 3.79E-31 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily IX88_03645 b2d20d5cadba4f687b2b717b9e4e1856 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-15 T 11-10-2018 IX88_08265 73ec63b0b3f463e98f20663036170854 368 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 155 268 3.5E-18 T 11-10-2018 IPR006528 Phage head morphogenesis domain IX88_08265 73ec63b0b3f463e98f20663036170854 368 Pfam PF04233 Phage Mu protein F like protein 153 264 1.8E-11 T 11-10-2018 IPR006528 Phage head morphogenesis domain IX88_15455 816f5560e6e24d5e746bcfb69ba64ba1 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 IX88_15455 816f5560e6e24d5e746bcfb69ba64ba1 476 Gene3D G3DSA:3.40.605.10 25 467 6.5E-164 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_15455 816f5560e6e24d5e746bcfb69ba64ba1 476 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 35 40 - T 11-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 IX88_15455 816f5560e6e24d5e746bcfb69ba64ba1 476 SUPERFAMILY SSF53720 5 473 6.28E-154 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_15455 816f5560e6e24d5e746bcfb69ba64ba1 476 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 IX88_15455 816f5560e6e24d5e746bcfb69ba64ba1 476 Gene3D G3DSA:3.40.309.10 254 443 6.5E-164 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_15455 816f5560e6e24d5e746bcfb69ba64ba1 476 Pfam PF00171 Aldehyde dehydrogenase family 22 466 2.1E-152 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_07885 108f25ead9dfa524b15ca07c0ec9149d 319 Pfam PF10118 Predicted metal-dependent hydrolase 33 285 6.4E-65 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_07885 108f25ead9dfa524b15ca07c0ec9149d 319 PIRSF PIRSF007580 22 303 1.0E-50 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_00490 9eaf893ba16f449764c0eff6b6f23c47 716 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 11 708 1.1E-203 T 11-10-2018 IPR010019 Integral membrane protein, YccS IX88_00490 9eaf893ba16f449764c0eff6b6f23c47 716 Pfam PF13515 Fusaric acid resistance protein-like 409 530 1.4E-22 T 11-10-2018 IX88_00490 9eaf893ba16f449764c0eff6b6f23c47 716 Pfam PF12805 FUSC-like inner membrane protein yccS 68 346 2.4E-86 T 11-10-2018 IPR032692 Integral membrane protein YccS, N-terminal IX88_00490 9eaf893ba16f449764c0eff6b6f23c47 716 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 707 1.0E-198 T 11-10-2018 IPR010020 Integral membrane protein, YccS/YhfK IX88_17535 2b9bca16384834d3953488b3a561c676 291 Pfam PF10118 Predicted metal-dependent hydrolase 15 260 1.3E-73 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_17535 2b9bca16384834d3953488b3a561c676 291 PIRSF PIRSF007580 2 278 9.5E-66 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_17535 2b9bca16384834d3953488b3a561c676 291 SUPERFAMILY SSF47240 5 195 4.96E-8 T 11-10-2018 IPR009078 Ferritin-like superfamily IX88_11555 ed7ad4a717bfb1ed9b186e7575427241 288 Pfam PF00753 Metallo-beta-lactamase superfamily 15 205 4.4E-20 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_11555 ed7ad4a717bfb1ed9b186e7575427241 288 Gene3D G3DSA:3.60.15.10 2 288 6.0E-101 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_11555 ed7ad4a717bfb1ed9b186e7575427241 288 SUPERFAMILY SSF56281 9 288 2.03E-43 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_11555 ed7ad4a717bfb1ed9b186e7575427241 288 SMART SM00849 15 205 8.1E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_02895 f35af72a424384e79af581925cdbfd71 621 Gene3D G3DSA:3.40.50.720 13 307 3.2E-36 T 11-10-2018 IX88_02895 f35af72a424384e79af581925cdbfd71 621 SUPERFAMILY SSF53474 376 608 2.55E-28 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_02895 f35af72a424384e79af581925cdbfd71 621 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 218 1.1E-18 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 IX88_02895 f35af72a424384e79af581925cdbfd71 621 SUPERFAMILY SSF51735 12 289 2.86E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_02895 f35af72a424384e79af581925cdbfd71 621 Pfam PF12697 Alpha/beta hydrolase family 385 601 2.1E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_02895 f35af72a424384e79af581925cdbfd71 621 Gene3D G3DSA:3.40.50.1820 355 619 2.6E-28 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_10495 db94451816801204df19fc74d4066cff 231 Pfam PF00753 Metallo-beta-lactamase superfamily 14 82 4.0E-7 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_10495 db94451816801204df19fc74d4066cff 231 Pfam PF00753 Metallo-beta-lactamase superfamily 93 171 2.1E-6 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_10495 db94451816801204df19fc74d4066cff 231 Gene3D G3DSA:3.60.15.10 1 231 1.2E-77 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_10495 db94451816801204df19fc74d4066cff 231 SMART SM00849 12 171 1.6E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_10495 db94451816801204df19fc74d4066cff 231 SUPERFAMILY SSF56281 5 226 1.4E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_12745 7e8ea8af1618bf125655afb9d8d07792 414 SUPERFAMILY SSF51004 99 395 4.19E-44 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily IX88_12745 7e8ea8af1618bf125655afb9d8d07792 414 Gene3D G3DSA:2.130.10.10 50 414 7.6E-96 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 IX88_12745 7e8ea8af1618bf125655afb9d8d07792 414 Pfam PF10282 Lactonase, 7-bladed beta-propeller 58 413 6.1E-88 T 11-10-2018 IPR019405 Lactonase, 7-bladed beta propeller IX88_08525 945bb54934929127d781872ffece57bb 406 Pfam PF00654 Voltage gated chloride channel 62 394 8.7E-59 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 IX88_08525 945bb54934929127d781872ffece57bb 406 SUPERFAMILY SSF81340 8 400 1.44E-74 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 IX88_08525 945bb54934929127d781872ffece57bb 406 Gene3D G3DSA:1.10.3080.10 14 403 7.1E-53 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 IX88_08525 945bb54934929127d781872ffece57bb 406 PRINTS PR00762 Chloride channel signature 317 337 1.3E-9 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 IX88_08525 945bb54934929127d781872ffece57bb 406 PRINTS PR00762 Chloride channel signature 153 172 1.3E-9 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 IX88_08525 945bb54934929127d781872ffece57bb 406 PRINTS PR00762 Chloride channel signature 345 361 1.3E-9 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 IX88_08525 945bb54934929127d781872ffece57bb 406 PRINTS PR00762 Chloride channel signature 102 121 1.3E-9 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 IX88_02520 9ede778423953b8140079ec87732a820 341 Gene3D G3DSA:2.40.30.10 28 127 2.3E-12 T 11-10-2018 IX88_02520 9ede778423953b8140079ec87732a820 341 PRINTS PR00410 Phenol hydroxylase reductase family signature 122 131 7.4E-6 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_02520 9ede778423953b8140079ec87732a820 341 PRINTS PR00410 Phenol hydroxylase reductase family signature 82 89 7.4E-6 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_02520 9ede778423953b8140079ec87732a820 341 PRINTS PR00410 Phenol hydroxylase reductase family signature 137 156 7.4E-6 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 IX88_02520 9ede778423953b8140079ec87732a820 341 Pfam PF00175 Oxidoreductase NAD-binding domain 138 231 1.2E-10 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 IX88_02520 9ede778423953b8140079ec87732a820 341 SUPERFAMILY SSF52343 118 241 5.37E-23 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_02520 9ede778423953b8140079ec87732a820 341 Gene3D G3DSA:3.40.50.80 128 256 1.1E-25 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IX88_02520 9ede778423953b8140079ec87732a820 341 Gene3D G3DSA:3.10.20.30 257 341 1.6E-9 T 11-10-2018 IPR012675 Beta-grasp domain superfamily IX88_02520 9ede778423953b8140079ec87732a820 341 SUPERFAMILY SSF63380 24 131 1.25E-17 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel IX88_02520 9ede778423953b8140079ec87732a820 341 Pfam PF00970 Oxidoreductase FAD-binding domain 36 127 6.6E-7 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 IX88_02520 9ede778423953b8140079ec87732a820 341 SUPERFAMILY SSF54292 242 341 1.89E-13 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 IX88_01355 97a33eb3542d3b468383ba65ffe7d8db 100 SUPERFAMILY SSF46785 2 98 1.68E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_01355 97a33eb3542d3b468383ba65ffe7d8db 100 Gene3D G3DSA:1.10.10.10 1 100 5.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_01355 97a33eb3542d3b468383ba65ffe7d8db 100 SMART SM00418 5 94 5.0E-6 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 IX88_01355 97a33eb3542d3b468383ba65ffe7d8db 100 Pfam PF12840 Helix-turn-helix domain 4 75 1.2E-14 T 11-10-2018 IX88_01790 d712293f76f2bd694f494f7ef5bff1c6 212 Gene3D G3DSA:1.10.150.240 22 86 8.2E-37 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IX88_01790 d712293f76f2bd694f494f7ef5bff1c6 212 Gene3D G3DSA:3.40.50.1000 11 202 8.2E-37 T 11-10-2018 IPR023214 HAD superfamily IX88_01790 d712293f76f2bd694f494f7ef5bff1c6 212 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 183 1.7E-37 T 11-10-2018 IX88_01790 d712293f76f2bd694f494f7ef5bff1c6 212 SUPERFAMILY SSF56784 6 208 1.53E-41 T 11-10-2018 IPR036412 HAD-like superfamily IX88_01790 d712293f76f2bd694f494f7ef5bff1c6 212 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 59 177 1.0E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IX88_17085 1a4973d11d6451a0b790cde9c3c1dc52 104 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 28 99 6.8E-17 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 IX88_17085 1a4973d11d6451a0b790cde9c3c1dc52 104 Gene3D G3DSA:1.10.20.60 9 102 1.5E-21 T 11-10-2018 IX88_17085 1a4973d11d6451a0b790cde9c3c1dc52 104 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 13 104 7.8E-28 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 IX88_17085 1a4973d11d6451a0b790cde9c3c1dc52 104 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 11 104 22.367 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 IX88_17085 1a4973d11d6451a0b790cde9c3c1dc52 104 SUPERFAMILY SSF141000 12 102 3.4E-27 T 11-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 IX88_05580 98579839f02838fab2c2b82311d0d311 183 Gene3D G3DSA:1.10.357.10 2 180 3.5E-31 T 11-10-2018 IX88_05580 98579839f02838fab2c2b82311d0d311 183 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 2.0E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_05580 98579839f02838fab2c2b82311d0d311 183 SUPERFAMILY SSF48498 75 159 2.03E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_05580 98579839f02838fab2c2b82311d0d311 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 5.7E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_05580 98579839f02838fab2c2b82311d0d311 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 5.7E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_05580 98579839f02838fab2c2b82311d0d311 183 SUPERFAMILY SSF46689 7 74 2.41E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_05895 3cf920f9152a4e5bc58bf9e39913a8ff 409 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 150 391 1.2E-96 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 IX88_05895 3cf920f9152a4e5bc58bf9e39913a8ff 409 Gene3D G3DSA:3.40.50.300 146 389 4.2E-80 T 11-10-2018 IX88_05895 3cf920f9152a4e5bc58bf9e39913a8ff 409 SUPERFAMILY SSF52540 143 374 1.55E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_05895 3cf920f9152a4e5bc58bf9e39913a8ff 409 ProSitePatterns PS01215 Mrp family signature. 257 273 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 IX88_05895 3cf920f9152a4e5bc58bf9e39913a8ff 409 Hamap MF_02040 Iron-sulfur cluster carrier protein. 144 403 36.263 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein IX88_09905 a4e7cf911a6b7c86e6b21920a392f617 502 Gene3D G3DSA:3.50.50.60 1 209 9.1E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_09905 a4e7cf911a6b7c86e6b21920a392f617 502 Pfam PF00743 Flavin-binding monooxygenase-like 12 347 3.0E-21 T 11-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 IX88_09905 a4e7cf911a6b7c86e6b21920a392f617 502 Gene3D G3DSA:3.50.50.60 304 500 2.1E-38 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_09905 a4e7cf911a6b7c86e6b21920a392f617 502 SUPERFAMILY SSF51905 11 482 7.38E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_09905 a4e7cf911a6b7c86e6b21920a392f617 502 SUPERFAMILY SSF51905 273 473 1.4E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_00260 c980270dc02a60fe20fec1d2269bc428 95 SUPERFAMILY SSF52091 9 94 4.71E-9 T 11-10-2018 IPR036513 STAS domain superfamily IX88_00260 c980270dc02a60fe20fec1d2269bc428 95 Pfam PF13466 STAS domain 9 84 5.4E-8 T 11-10-2018 IPR002645 STAS domain IX88_00260 c980270dc02a60fe20fec1d2269bc428 95 Gene3D G3DSA:3.30.750.24 8 95 1.0E-8 T 11-10-2018 IPR036513 STAS domain superfamily IX88_15810 be58c890b168d60f05bf6ba3fb4d383d 275 ProSitePatterns PS00501 Signal peptidases I serine active site. 70 77 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 IX88_15810 be58c890b168d60f05bf6ba3fb4d383d 275 SUPERFAMILY SSF51306 59 262 1.92E-66 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily IX88_15810 be58c890b168d60f05bf6ba3fb4d383d 275 Pfam PF10502 Signal peptidase, peptidase S26 217 256 1.3E-5 T 11-10-2018 IPR019533 Peptidase S26 IX88_15810 be58c890b168d60f05bf6ba3fb4d383d 275 ProSitePatterns PS00760 Signal peptidases I lysine active site. 127 139 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 IX88_15810 be58c890b168d60f05bf6ba3fb4d383d 275 Gene3D G3DSA:2.170.230.10 136 218 5.4E-69 T 11-10-2018 IX88_15810 be58c890b168d60f05bf6ba3fb4d383d 275 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 49 257 4.8E-49 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 IX88_15810 be58c890b168d60f05bf6ba3fb4d383d 275 Gene3D G3DSA:2.10.109.10 59 258 5.4E-69 T 11-10-2018 IX88_15810 be58c890b168d60f05bf6ba3fb4d383d 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 61 77 2.3E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 IX88_15810 be58c890b168d60f05bf6ba3fb4d383d 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 125 137 2.3E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 IX88_15810 be58c890b168d60f05bf6ba3fb4d383d 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 219 238 2.3E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 IX88_15810 be58c890b168d60f05bf6ba3fb4d383d 275 Pfam PF00717 Peptidase S24-like 68 149 5.1E-22 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C IX88_11835 c3d010bceb57074bcebd34af3fdf98b0 198 Pfam PF00881 Nitroreductase family 8 176 1.2E-15 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 IX88_11835 c3d010bceb57074bcebd34af3fdf98b0 198 Gene3D G3DSA:3.40.109.10 1 198 5.9E-82 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IX88_11835 c3d010bceb57074bcebd34af3fdf98b0 198 SUPERFAMILY SSF55469 4 197 2.49E-67 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IX88_13250 2261b5adfafd3aa2cc5c9fd92dcf2753 145 SUPERFAMILY SSF55083 8 127 5.36E-15 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 IX88_13250 2261b5adfafd3aa2cc5c9fd92dcf2753 145 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 10 111 4.4E-12 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 IX88_13250 2261b5adfafd3aa2cc5c9fd92dcf2753 145 Gene3D G3DSA:3.30.70.560 6 138 1.2E-11 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 IX88_04120 e6aabdee39d5bf41fd3c371110193fb3 203 Pfam PF01810 LysE type translocator 14 200 2.6E-26 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_07990 39cb0a0fe2a6b93b8dc64e46acd9a0e5 235 SMART SM00419 170 218 4.5E-13 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 IX88_07990 39cb0a0fe2a6b93b8dc64e46acd9a0e5 235 Gene3D G3DSA:2.60.120.10 21 148 3.0E-41 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_07990 39cb0a0fe2a6b93b8dc64e46acd9a0e5 235 Gene3D G3DSA:1.10.10.10 149 217 3.1E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_07990 39cb0a0fe2a6b93b8dc64e46acd9a0e5 235 ProSitePatterns PS00042 Crp-type HTH domain signature. 178 201 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 IX88_07990 39cb0a0fe2a6b93b8dc64e46acd9a0e5 235 SMART SM00100 14 132 4.2E-21 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain IX88_07990 39cb0a0fe2a6b93b8dc64e46acd9a0e5 235 SUPERFAMILY SSF51206 20 147 1.15E-30 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like IX88_07990 39cb0a0fe2a6b93b8dc64e46acd9a0e5 235 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 81 99 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site IX88_07990 39cb0a0fe2a6b93b8dc64e46acd9a0e5 235 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 1.1E-8 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 IX88_07990 39cb0a0fe2a6b93b8dc64e46acd9a0e5 235 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 1.1E-8 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 IX88_07990 39cb0a0fe2a6b93b8dc64e46acd9a0e5 235 Pfam PF00325 Bacterial regulatory proteins, crp family 176 207 2.4E-14 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 IX88_07990 39cb0a0fe2a6b93b8dc64e46acd9a0e5 235 Pfam PF00027 Cyclic nucleotide-binding domain 33 120 4.6E-21 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain IX88_07990 39cb0a0fe2a6b93b8dc64e46acd9a0e5 235 SUPERFAMILY SSF46785 149 218 9.11E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_07920 6a7b4955962e3c85bac54e639f7c2e35 439 Pfam PF00860 Permease family 27 398 6.6E-56 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 IX88_07920 6a7b4955962e3c85bac54e639f7c2e35 439 PIRSF PIRSF005353 1 438 8.0E-185 T 11-10-2018 IPR026033 Purine permease PbuG-like IX88_09170 016d9476552425c598620ab5378cae4a 264 Gene3D G3DSA:3.40.50.300 2 259 8.1E-62 T 11-10-2018 IX88_09170 016d9476552425c598620ab5378cae4a 264 SUPERFAMILY SSF52540 4 218 8.83E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_09170 016d9476552425c598620ab5378cae4a 264 Pfam PF00005 ABC transporter 21 161 2.4E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_09170 016d9476552425c598620ab5378cae4a 264 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_09170 016d9476552425c598620ab5378cae4a 264 SMART SM00382 30 229 2.2E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_06435 c709643b024677fb6f266d88e3ca70e1 355 SUPERFAMILY SSF161070 35 351 3.14E-10 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 IX88_00965 17d6a51e9423957443ebc27a8614e3f9 243 Gene3D G3DSA:3.20.20.70 2 242 1.0E-85 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_00965 17d6a51e9423957443ebc27a8614e3f9 243 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 237 35.823 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 IX88_00965 17d6a51e9423957443ebc27a8614e3f9 243 Pfam PF00977 Histidine biosynthesis protein 3 229 1.1E-78 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 IX88_00965 17d6a51e9423957443ebc27a8614e3f9 243 SUPERFAMILY SSF51366 1 235 1.57E-74 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 IX88_00965 17d6a51e9423957443ebc27a8614e3f9 243 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 233 2.1E-79 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 IX88_12580 55c4616b85fee47540b24e999a1471dd 133 Gene3D G3DSA:3.40.960.10 28 132 8.5E-10 T 11-10-2018 IX88_12580 55c4616b85fee47540b24e999a1471dd 133 Pfam PF04480 Protein of unknown function (DUF559) 19 119 2.0E-6 T 11-10-2018 IPR007569 Protein of unknown function DUF559 IX88_12580 55c4616b85fee47540b24e999a1471dd 133 SUPERFAMILY SSF52980 16 120 4.77E-6 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 IX88_01865 ea313837091a13641829f38cb71d0deb 182 SUPERFAMILY SSF54593 2 140 6.85E-37 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IX88_01865 ea313837091a13641829f38cb71d0deb 182 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 116 135 - T 11-10-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 IX88_01865 ea313837091a13641829f38cb71d0deb 182 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 136 4.0E-18 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain IX88_01865 ea313837091a13641829f38cb71d0deb 182 Gene3D G3DSA:3.10.180.10 1 175 1.2E-36 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IX88_16175 aa68b629a4c45719d6f9bc7a5dead6bb 207 PIRSF PIRSF006324 1 207 3.0E-51 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_16175 aa68b629a4c45719d6f9bc7a5dead6bb 207 Pfam PF01810 LysE type translocator 15 205 1.0E-33 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_14020 95109ce28c2fdd0852e25ea4d2407ad1 154 SUPERFAMILY SSF55729 37 144 2.04E-9 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_14020 95109ce28c2fdd0852e25ea4d2407ad1 154 ProDom PD302408 P31 ECS3234 GENOME 43 154 1.0E-4 T 11-10-2018 IPR022568 Protein of unknown function DUF2824 IX88_14020 95109ce28c2fdd0852e25ea4d2407ad1 154 Pfam PF11039 Protein of unknown function (DUF2824) 42 152 1.0E-8 T 11-10-2018 IPR022568 Protein of unknown function DUF2824 IX88_14020 95109ce28c2fdd0852e25ea4d2407ad1 154 Gene3D G3DSA:3.40.630.30 3 150 2.5E-11 T 11-10-2018 IX88_05650 fbc7ae46ed7134abd86299ade1e2e72f 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 69 92 3.8E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_05650 fbc7ae46ed7134abd86299ade1e2e72f 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 61 3.8E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_05650 fbc7ae46ed7134abd86299ade1e2e72f 223 Gene3D G3DSA:1.10.357.10 26 221 1.6E-19 T 11-10-2018 IX88_05650 fbc7ae46ed7134abd86299ade1e2e72f 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 50 92 2.1E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_05650 fbc7ae46ed7134abd86299ade1e2e72f 223 SUPERFAMILY SSF46689 44 101 1.39E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_03905 760227075c52e522a2a752e5d63510ee 436 SMART SM00028 64 97 0.27 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IX88_03905 760227075c52e522a2a752e5d63510ee 436 SMART SM00028 30 63 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 IX88_03905 760227075c52e522a2a752e5d63510ee 436 SUPERFAMILY SSF48452 42 121 1.1E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_03905 760227075c52e522a2a752e5d63510ee 436 Gene3D G3DSA:1.25.40.10 12 137 6.7E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_03420 4e904235025eebc7976a6d2afb266450 379 TIGRFAM TIGR00260 thrC: threonine synthase 11 350 3.8E-91 T 11-10-2018 IPR004450 Threonine synthase-like IX88_03420 4e904235025eebc7976a6d2afb266450 379 Gene3D G3DSA:3.40.50.1100 65 161 1.2E-115 T 11-10-2018 IX88_03420 4e904235025eebc7976a6d2afb266450 379 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 57 70 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 IX88_03420 4e904235025eebc7976a6d2afb266450 379 Gene3D G3DSA:3.40.50.1100 17 350 1.2E-115 T 11-10-2018 IX88_03420 4e904235025eebc7976a6d2afb266450 379 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 343 1.1E-64 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme IX88_03420 4e904235025eebc7976a6d2afb266450 379 SUPERFAMILY SSF53686 11 376 3.14E-101 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IX88_03420 4e904235025eebc7976a6d2afb266450 379 PIRSF PIRSF038945 1 375 6.0E-151 T 11-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 IX88_04590 c89be927d1398aa5f1aa8d197f687c68 280 ProSitePatterns PS00091 Thymidylate synthase active site. 142 170 - T 11-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 IX88_04590 c89be927d1398aa5f1aa8d197f687c68 280 Hamap MF_00008 Thymidylate synthase [thyA]. 1 280 39.589 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 IX88_04590 c89be927d1398aa5f1aa8d197f687c68 280 Pfam PF00303 Thymidylate synthase 3 280 1.6E-117 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 IX88_04590 c89be927d1398aa5f1aa8d197f687c68 280 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 280 5.3E-139 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 IX88_04590 c89be927d1398aa5f1aa8d197f687c68 280 Gene3D G3DSA:3.30.572.10 1 280 1.3E-131 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 IX88_04590 c89be927d1398aa5f1aa8d197f687c68 280 PRINTS PR00108 Thymidylate synthase family signature 131 150 3.1E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 IX88_04590 c89be927d1398aa5f1aa8d197f687c68 280 PRINTS PR00108 Thymidylate synthase family signature 157 172 3.1E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 IX88_04590 c89be927d1398aa5f1aa8d197f687c68 280 PRINTS PR00108 Thymidylate synthase family signature 42 63 3.1E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 IX88_04590 c89be927d1398aa5f1aa8d197f687c68 280 PRINTS PR00108 Thymidylate synthase family signature 175 201 3.1E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 IX88_04590 c89be927d1398aa5f1aa8d197f687c68 280 PRINTS PR00108 Thymidylate synthase family signature 213 230 3.1E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 IX88_04590 c89be927d1398aa5f1aa8d197f687c68 280 SUPERFAMILY SSF55831 1 280 2.36E-129 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 IX88_10725 6739dc54360e522f27049b3552ea2d0d 230 SUPERFAMILY SSF161098 7 220 1.96E-46 T 11-10-2018 IPR035906 MetI-like superfamily IX88_10725 6739dc54360e522f27049b3552ea2d0d 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 226 2.0E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_10725 6739dc54360e522f27049b3552ea2d0d 230 Gene3D G3DSA:1.10.3720.10 2 226 2.1E-53 T 11-10-2018 IPR035906 MetI-like superfamily IX88_10725 6739dc54360e522f27049b3552ea2d0d 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 15 215 1.5E-65 T 11-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 IX88_15160 66b64376fa3a40fa9ad6a1b9d82bfe60 389 Gene3D G3DSA:3.60.120.10 4 385 1.8E-111 T 11-10-2018 IPR005801 ADC synthase GO:0009058 IX88_15160 66b64376fa3a40fa9ad6a1b9d82bfe60 389 Pfam PF00425 chorismate binding enzyme 120 375 3.7E-71 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal IX88_15160 66b64376fa3a40fa9ad6a1b9d82bfe60 389 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 96 383 9.4E-89 T 11-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 IX88_15160 66b64376fa3a40fa9ad6a1b9d82bfe60 389 SUPERFAMILY SSF56322 52 384 6.28E-89 T 11-10-2018 IPR005801 ADC synthase GO:0009058 IX88_04850 5ab829adb5b4b9f144b58822bb5840ef 138 Pfam PF00581 Rhodanese-like domain 47 126 6.6E-12 T 11-10-2018 IPR001763 Rhodanese-like domain IX88_04850 5ab829adb5b4b9f144b58822bb5840ef 138 Gene3D G3DSA:3.40.250.10 37 136 1.8E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily IX88_04850 5ab829adb5b4b9f144b58822bb5840ef 138 SMART SM00450 37 130 1.5E-14 T 11-10-2018 IPR001763 Rhodanese-like domain IX88_04850 5ab829adb5b4b9f144b58822bb5840ef 138 SUPERFAMILY SSF52821 16 134 1.57E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily IX88_04730 46cf8c6a67df166b4044f988b84f5504 206 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 IX88_04730 46cf8c6a67df166b4044f988b84f5504 206 Gene3D G3DSA:3.20.20.70 1 206 7.0E-70 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_04730 46cf8c6a67df166b4044f988b84f5504 206 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 IX88_04730 46cf8c6a67df166b4044f988b84f5504 206 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 203 1.1E-72 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 IX88_04730 46cf8c6a67df166b4044f988b84f5504 206 SUPERFAMILY SSF51569 4 203 7.87E-64 T 11-10-2018 IX88_04730 46cf8c6a67df166b4044f988b84f5504 206 Pfam PF01081 KDPG and KHG aldolase 4 199 4.9E-66 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 IX88_13080 5cd1d86e7cfc87e86f83af041afc503f 169 Gene3D G3DSA:2.40.100.10 3 167 1.7E-66 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily IX88_13080 5cd1d86e7cfc87e86f83af041afc503f 169 SUPERFAMILY SSF50891 6 167 4.97E-59 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily IX88_13080 5cd1d86e7cfc87e86f83af041afc503f 169 PIRSF PIRSF001467 1 169 1.9E-28 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 IX88_13080 5cd1d86e7cfc87e86f83af041afc503f 169 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 165 4.8E-50 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 IX88_13080 5cd1d86e7cfc87e86f83af041afc503f 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 57 2.1E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 IX88_13080 5cd1d86e7cfc87e86f83af041afc503f 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 19 34 2.1E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 IX88_13080 5cd1d86e7cfc87e86f83af041afc503f 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 2.1E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 IX88_13080 5cd1d86e7cfc87e86f83af041afc503f 169 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 40 57 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 IX88_06750 df421daa14e305c31e99e4a32093833e 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 192 0.0059 T 11-10-2018 IX88_06750 df421daa14e305c31e99e4a32093833e 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.5E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06750 df421daa14e305c31e99e4a32093833e 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.5E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06750 df421daa14e305c31e99e4a32093833e 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.5E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06750 df421daa14e305c31e99e4a32093833e 254 Gene3D G3DSA:3.40.50.720 2 253 3.1E-70 T 11-10-2018 IX88_06750 df421daa14e305c31e99e4a32093833e 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 251 1.1E-58 T 11-10-2018 IX88_06750 df421daa14e305c31e99e4a32093833e 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_06750 df421daa14e305c31e99e4a32093833e 254 SUPERFAMILY SSF51735 8 252 4.6E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_06750 df421daa14e305c31e99e4a32093833e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 7.8E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06750 df421daa14e305c31e99e4a32093833e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 7.8E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06750 df421daa14e305c31e99e4a32093833e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 7.8E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06750 df421daa14e305c31e99e4a32093833e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 7.8E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06750 df421daa14e305c31e99e4a32093833e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 7.8E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_06750 df421daa14e305c31e99e4a32093833e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 7.8E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_17995 0a48e457db5c3bdb48cee3d8e665a986 199 ProSitePatterns PS01081 TetR-type HTH domain signature. 35 66 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site IX88_17995 0a48e457db5c3bdb48cee3d8e665a986 199 Gene3D G3DSA:1.10.357.10 15 199 8.0E-53 T 11-10-2018 IX88_17995 0a48e457db5c3bdb48cee3d8e665a986 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 3.5E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_17995 0a48e457db5c3bdb48cee3d8e665a986 199 SUPERFAMILY SSF48498 90 198 5.34E-16 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_17995 0a48e457db5c3bdb48cee3d8e665a986 199 SUPERFAMILY SSF46689 17 95 3.29E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_17995 0a48e457db5c3bdb48cee3d8e665a986 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.6E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_17995 0a48e457db5c3bdb48cee3d8e665a986 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.6E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_12990 4c68bede1f72ede4f1ec99c1849c0117 234 SUPERFAMILY SSF49354 18 141 3.27E-23 T 11-10-2018 IPR008962 PapD-like superfamily IX88_12990 4c68bede1f72ede4f1ec99c1849c0117 234 Gene3D G3DSA:2.60.40.10 29 144 3.7E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold IX88_12990 4c68bede1f72ede4f1ec99c1849c0117 234 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 141 5.7E-19 T 11-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 IX88_17390 e1d08eda5305f1f97bf53b43e78804ed 349 Gene3D G3DSA:2.40.160.20 13 186 3.0E-18 T 11-10-2018 IX88_17390 e1d08eda5305f1f97bf53b43e78804ed 349 Pfam PF00691 OmpA family 226 322 1.9E-23 T 11-10-2018 IPR006665 OmpA-like domain IX88_17390 e1d08eda5305f1f97bf53b43e78804ed 349 SUPERFAMILY SSF103088 204 326 4.05E-34 T 11-10-2018 IPR036737 OmpA-like domain superfamily IX88_17390 e1d08eda5305f1f97bf53b43e78804ed 349 PRINTS PR01021 OMPA domain signature 227 249 6.1E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_17390 e1d08eda5305f1f97bf53b43e78804ed 349 PRINTS PR01021 OMPA domain signature 257 272 6.1E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_17390 e1d08eda5305f1f97bf53b43e78804ed 349 PRINTS PR01021 OMPA domain signature 272 288 6.1E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 IX88_17390 e1d08eda5305f1f97bf53b43e78804ed 349 Gene3D G3DSA:3.30.1330.60 211 332 3.1E-45 T 11-10-2018 IPR036737 OmpA-like domain superfamily IX88_17390 e1d08eda5305f1f97bf53b43e78804ed 349 Pfam PF13505 Outer membrane protein beta-barrel domain 7 184 1.1E-10 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel IX88_17390 e1d08eda5305f1f97bf53b43e78804ed 349 SUPERFAMILY SSF56925 31 191 3.14E-18 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IX88_07795 aaeca82bf0c4269f9fcb26062883f607 625 Gene3D G3DSA:3.40.50.12780 32 458 1.0E-58 T 11-10-2018 IX88_07795 aaeca82bf0c4269f9fcb26062883f607 625 SUPERFAMILY SSF56801 16 511 1.83E-66 T 11-10-2018 IX88_07795 aaeca82bf0c4269f9fcb26062883f607 625 Pfam PF00501 AMP-binding enzyme 53 473 1.5E-52 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IX88_16130 8ce934386a3e92e579010f6a501d155f 363 Pfam PF12698 ABC-2 family transporter protein 19 355 5.5E-37 T 11-10-2018 IX88_02485 c6fc33aa6a0102e1cf28ab5f58ca9b9e 136 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 78 131 2.0E-18 T 11-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB IX88_02485 c6fc33aa6a0102e1cf28ab5f58ca9b9e 136 Gene3D G3DSA:3.10.450.160 56 135 8.6E-14 T 11-10-2018 IX88_02485 c6fc33aa6a0102e1cf28ab5f58ca9b9e 136 Pfam PF11776 Nickel/cobalt transporter regulator 83 132 2.3E-16 T 11-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB IX88_17745 18b96d2cf0fd1dee99e8e9586549f2af 377 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 369 4.4E-172 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 IX88_17745 18b96d2cf0fd1dee99e8e9586549f2af 377 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 368 2.8E-163 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 IX88_17745 18b96d2cf0fd1dee99e8e9586549f2af 377 SUPERFAMILY SSF51713 1 365 8.89E-163 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 IX88_17745 18b96d2cf0fd1dee99e8e9586549f2af 377 Gene3D G3DSA:3.20.20.105 1 368 4.0E-171 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 IX88_17745 18b96d2cf0fd1dee99e8e9586549f2af 377 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 365 57.131 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 IX88_17745 18b96d2cf0fd1dee99e8e9586549f2af 377 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 362 8.5E-93 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 IX88_17425 936bd9b0afedfa9b3f00434cec6b4604 801 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 409 430 - T 11-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 IX88_17425 936bd9b0afedfa9b3f00434cec6b4604 801 Gene3D G3DSA:2.140.10.10 160 565 2.1E-113 T 11-10-2018 IX88_17425 936bd9b0afedfa9b3f00434cec6b4604 801 Pfam PF01011 PQQ enzyme repeat 444 473 1.3E-5 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat IX88_17425 936bd9b0afedfa9b3f00434cec6b4604 801 Pfam PF01011 PQQ enzyme repeat 727 764 2.3E-7 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat IX88_17425 936bd9b0afedfa9b3f00434cec6b4604 801 Pfam PF13360 PQQ-like domain 217 394 1.8E-6 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat IX88_17425 936bd9b0afedfa9b3f00434cec6b4604 801 SUPERFAMILY SSF50998 162 798 2.09E-152 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily IX88_17425 936bd9b0afedfa9b3f00434cec6b4604 801 SMART SM00564 217 249 1.5E-4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IX88_17425 936bd9b0afedfa9b3f00434cec6b4604 801 SMART SM00564 721 754 0.0097 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IX88_17425 936bd9b0afedfa9b3f00434cec6b4604 801 SMART SM00564 414 463 62.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IX88_17425 936bd9b0afedfa9b3f00434cec6b4604 801 SMART SM00564 287 319 120.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IX88_17425 936bd9b0afedfa9b3f00434cec6b4604 801 SMART SM00564 345 385 0.053 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IX88_17425 936bd9b0afedfa9b3f00434cec6b4604 801 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 165 193 - T 11-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 IX88_17425 936bd9b0afedfa9b3f00434cec6b4604 801 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 13 798 0.0 T 11-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 IX88_17425 936bd9b0afedfa9b3f00434cec6b4604 801 Gene3D G3DSA:2.140.10.10 571 801 2.6E-34 T 11-10-2018 IX88_06410 2fb3d2ead9c6c288103b3fc1cd9d36b3 472 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_06410 2fb3d2ead9c6c288103b3fc1cd9d36b3 472 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 10 135 7.7E-30 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_06410 2fb3d2ead9c6c288103b3fc1cd9d36b3 472 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 208 221 3.8E-21 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_06410 2fb3d2ead9c6c288103b3fc1cd9d36b3 472 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 237 252 3.8E-21 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_06410 2fb3d2ead9c6c288103b3fc1cd9d36b3 472 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 3.8E-21 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_06410 2fb3d2ead9c6c288103b3fc1cd9d36b3 472 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 3.8E-21 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_06410 2fb3d2ead9c6c288103b3fc1cd9d36b3 472 Gene3D G3DSA:3.40.120.10 176 253 3.4E-24 T 11-10-2018 IX88_06410 2fb3d2ead9c6c288103b3fc1cd9d36b3 472 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 256 5.3E-25 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_06410 2fb3d2ead9c6c288103b3fc1cd9d36b3 472 SUPERFAMILY SSF53738 7 180 1.38E-31 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_06410 2fb3d2ead9c6c288103b3fc1cd9d36b3 472 SUPERFAMILY SSF53738 263 371 5.1E-22 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_06410 2fb3d2ead9c6c288103b3fc1cd9d36b3 472 SUPERFAMILY SSF53738 159 259 5.1E-26 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_06410 2fb3d2ead9c6c288103b3fc1cd9d36b3 472 Gene3D G3DSA:3.30.310.50 378 468 6.1E-16 T 11-10-2018 IX88_06410 2fb3d2ead9c6c288103b3fc1cd9d36b3 472 Gene3D G3DSA:3.40.120.10 2 142 8.9E-38 T 11-10-2018 IX88_06410 2fb3d2ead9c6c288103b3fc1cd9d36b3 472 SUPERFAMILY SSF55957 396 463 4.71E-13 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_06410 2fb3d2ead9c6c288103b3fc1cd9d36b3 472 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 374 1.9E-17 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 IX88_06410 2fb3d2ead9c6c288103b3fc1cd9d36b3 472 Gene3D G3DSA:3.40.120.10 256 376 9.9E-30 T 11-10-2018 IX88_01060 054490a9a56872b6f69bd44c9a96f3d5 185 Gene3D G3DSA:3.40.50.360 1 184 2.1E-54 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_01060 054490a9a56872b6f69bd44c9a96f3d5 185 SUPERFAMILY SSF52218 1 180 7.96E-45 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_01060 054490a9a56872b6f69bd44c9a96f3d5 185 Pfam PF02525 Flavodoxin-like fold 2 166 1.8E-39 T 11-10-2018 IPR003680 Flavodoxin-like fold IX88_09130 455d350fc2ef1d56ab0f69ef2486e48a 334 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 4 209 3.7E-43 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 IX88_09130 455d350fc2ef1d56ab0f69ef2486e48a 334 PIRSF PIRSF000267 1 334 9.4E-90 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 IX88_09130 455d350fc2ef1d56ab0f69ef2486e48a 334 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 322 6.4E-96 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 IX88_06515 a5b7be59ab618f7e33e5955c9caeb5df 165 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 45 158 9.2E-12 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 IX88_06515 a5b7be59ab618f7e33e5955c9caeb5df 165 Gene3D G3DSA:3.10.129.10 12 165 2.6E-41 T 11-10-2018 IX88_06515 a5b7be59ab618f7e33e5955c9caeb5df 165 Pfam PF03061 Thioesterase superfamily 68 156 5.0E-15 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 IX88_06515 a5b7be59ab618f7e33e5955c9caeb5df 165 SUPERFAMILY SSF54637 24 162 6.46E-22 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_04960 fd3aeca716b0cf2796f81424934dfb6c 280 Gene3D G3DSA:3.30.565.40 52 163 1.4E-8 T 11-10-2018 IX88_14725 184aad7b79a174833ea03ee027b8c5a1 147 Pfam PF10881 Protein of unknown function (DUF2726) 38 146 7.2E-17 T 11-10-2018 IPR024402 Domain of unknown function DUF2726 IX88_14725 184aad7b79a174833ea03ee027b8c5a1 147 Gene3D G3DSA:3.40.960.10 41 146 9.3E-9 T 11-10-2018 IX88_04785 91edea8f67a6d573c7cadc79d82f07da 66 Pfam PF04384 Iron-sulphur cluster assembly 3 65 1.2E-31 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 IX88_04785 91edea8f67a6d573c7cadc79d82f07da 66 PIRSF PIRSF039003 3 66 2.5E-35 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 IX88_04785 91edea8f67a6d573c7cadc79d82f07da 66 Gene3D G3DSA:1.10.10.600 1 66 2.6E-28 T 11-10-2018 IPR036762 IscX-like superfamily IX88_04785 91edea8f67a6d573c7cadc79d82f07da 66 SUPERFAMILY SSF140319 3 64 1.1E-26 T 11-10-2018 IPR036762 IscX-like superfamily IX88_04785 91edea8f67a6d573c7cadc79d82f07da 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 65 9.5E-32 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 IX88_03540 1afe32ffdf911adfa1f468321853cab6 255 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 227 1.3E-31 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 IX88_03540 1afe32ffdf911adfa1f468321853cab6 255 SUPERFAMILY SSF69618 5 248 6.41E-43 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 IX88_03540 1afe32ffdf911adfa1f468321853cab6 255 Gene3D G3DSA:3.40.50.10090 5 227 4.9E-43 T 11-10-2018 IX88_03540 1afe32ffdf911adfa1f468321853cab6 255 Gene3D G3DSA:3.40.50.10090 32 166 4.9E-43 T 11-10-2018 IX88_07110 f93e9149b80eaba1a4bf9e545e85d503 189 Pfam PF04955 HupE / UreJ protein 12 185 3.7E-26 T 11-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein IX88_07110 f93e9149b80eaba1a4bf9e545e85d503 189 PIRSF PIRSF016919 3 189 5.1E-26 T 11-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein IX88_01040 2e3ddbe478f0d1e79c9d57946b987d71 625 Pfam PF02705 K+ potassium transporter 15 546 3.3E-205 T 11-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 IX88_01040 2e3ddbe478f0d1e79c9d57946b987d71 625 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 6 625 33.579 T 11-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup IX88_07120 070cada2d54003c2735296d49ab79a06 672 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 3 609 49.817 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 IX88_07120 070cada2d54003c2735296d49ab79a06 672 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 234 8.6E-45 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 IX88_07120 070cada2d54003c2735296d49ab79a06 672 Gene3D G3DSA:3.30.1390.30 85 160 1.0E-47 T 11-10-2018 IX88_07120 070cada2d54003c2735296d49ab79a06 672 Gene3D G3DSA:3.90.1310.10 64 244 1.0E-47 T 11-10-2018 IX88_07120 070cada2d54003c2735296d49ab79a06 672 SUPERFAMILY SSF56519 56 249 1.57E-52 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 IX88_07120 070cada2d54003c2735296d49ab79a06 672 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 605 3.5E-221 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 IX88_07120 070cada2d54003c2735296d49ab79a06 672 Pfam PF00905 Penicillin binding protein transpeptidase domain 267 600 2.3E-75 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 IX88_07120 070cada2d54003c2735296d49ab79a06 672 Gene3D G3DSA:3.40.710.10 245 617 1.5E-99 T 11-10-2018 IX88_07120 070cada2d54003c2735296d49ab79a06 672 SUPERFAMILY SSF56601 250 606 8.54E-97 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like IX88_16550 5f4e87d30bf4ed3de621a4411b394f6a 587 SUPERFAMILY SSF56300 138 551 6.99E-37 T 11-10-2018 IX88_16550 5f4e87d30bf4ed3de621a4411b394f6a 587 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 47 136 5.1E-31 T 11-10-2018 IPR032093 Phospholipase D, N-terminal IX88_16550 5f4e87d30bf4ed3de621a4411b394f6a 587 Gene3D G3DSA:2.60.40.380 39 139 9.5E-35 T 11-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 IX88_16550 5f4e87d30bf4ed3de621a4411b394f6a 587 Pfam PF09423 PhoD-like phosphatase 146 550 1.8E-123 T 11-10-2018 IPR018946 Alkaline phosphatase D-related IX88_13445 7ea3f49346101a548bfdf6d64d792825 516 Pfam PF14403 Circularly permuted ATP-grasp type 2 115 489 5.9E-148 T 11-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 IX88_13445 7ea3f49346101a548bfdf6d64d792825 516 PIRSF PIRSF005522 35 516 1.2E-215 T 11-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 IX88_13445 7ea3f49346101a548bfdf6d64d792825 516 Gene3D G3DSA:3.30.1490.270 385 445 1.5E-26 T 11-10-2018 IX88_13445 7ea3f49346101a548bfdf6d64d792825 516 Gene3D G3DSA:3.40.50.11290 250 348 3.8E-39 T 11-10-2018 IX88_13445 7ea3f49346101a548bfdf6d64d792825 516 SUPERFAMILY SSF56059 66 504 2.83E-54 T 11-10-2018 IX88_12880 53fec7f2880dc73331d754073f5b58c3 141 Gene3D G3DSA:2.60.120.380 24 136 5.9E-26 T 11-10-2018 IX88_06445 5ac258eb3b207d93232703e15c895653 132 Pfam PF04355 SmpA / OmlA family 30 106 1.9E-23 T 11-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 IX88_06445 5ac258eb3b207d93232703e15c895653 132 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 117 31.643 T 11-10-2018 IPR026592 Outer membrane protein assembly factor BamE IX88_06445 5ac258eb3b207d93232703e15c895653 132 Gene3D G3DSA:3.30.1450.10 29 117 3.9E-23 T 11-10-2018 IPR037873 BamE-like IX88_15230 c1cb77af0b45113eee1c8306334fb988 315 SUPERFAMILY SSF81345 3 310 8.11E-44 T 11-10-2018 IPR037294 ABC transporter, BtuC-like IX88_15230 c1cb77af0b45113eee1c8306334fb988 315 Pfam PF01032 FecCD transport family 30 310 7.2E-38 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 IX88_15230 c1cb77af0b45113eee1c8306334fb988 315 Gene3D G3DSA:1.10.3470.10 2 314 5.7E-40 T 11-10-2018 IPR037294 ABC transporter, BtuC-like IX88_00505 5a02b495a1fe746a7decf553ddb1db94 195 SUPERFAMILY SSF52218 1 193 2.39E-40 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_00505 5a02b495a1fe746a7decf553ddb1db94 195 Gene3D G3DSA:3.40.50.360 1 193 5.8E-61 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_00505 5a02b495a1fe746a7decf553ddb1db94 195 Pfam PF02525 Flavodoxin-like fold 3 188 1.2E-33 T 11-10-2018 IPR003680 Flavodoxin-like fold IX88_01095 3f892c7e0039b16f6f9991ad7a3e3be8 183 SUPERFAMILY SSF46689 6 72 6.16E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_01095 3f892c7e0039b16f6f9991ad7a3e3be8 183 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 1.2E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_01095 3f892c7e0039b16f6f9991ad7a3e3be8 183 Gene3D G3DSA:1.10.357.10 4 179 7.3E-23 T 11-10-2018 IX88_01095 3f892c7e0039b16f6f9991ad7a3e3be8 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.7E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_01095 3f892c7e0039b16f6f9991ad7a3e3be8 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.7E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_13345 85cd9fe6b71851d2853dbff70bf8363e 154 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 28 149 9.7E-23 T 11-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 IX88_13345 85cd9fe6b71851d2853dbff70bf8363e 154 Pfam PF13994 PgaD-like protein 26 148 6.0E-22 T 11-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 IX88_09315 6b6d58cb4413a2d0b57fc50d7dac6235 389 Gene3D G3DSA:3.40.640.10 42 287 7.9E-123 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_09315 6b6d58cb4413a2d0b57fc50d7dac6235 389 Pfam PF00155 Aminotransferase class I and II 30 385 1.8E-51 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 IX88_09315 6b6d58cb4413a2d0b57fc50d7dac6235 389 Gene3D G3DSA:3.90.1150.10 13 380 7.9E-123 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_09315 6b6d58cb4413a2d0b57fc50d7dac6235 389 SUPERFAMILY SSF53383 2 389 1.32E-92 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_09315 6b6d58cb4413a2d0b57fc50d7dac6235 389 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 388 2.7E-201 T 11-10-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 IX88_00785 ccce38f7aec88260dcabbc7202429d31 333 Pfam PF13531 Bacterial extracellular solute-binding protein 42 282 1.0E-43 T 11-10-2018 IX88_00785 ccce38f7aec88260dcabbc7202429d31 333 Gene3D G3DSA:3.40.190.10 30 297 2.3E-134 T 11-10-2018 IX88_00785 ccce38f7aec88260dcabbc7202429d31 333 SUPERFAMILY SSF53850 22 329 8.82E-88 T 11-10-2018 IX88_00785 ccce38f7aec88260dcabbc7202429d31 333 Gene3D G3DSA:3.40.190.10 116 327 2.3E-134 T 11-10-2018 IX88_00785 ccce38f7aec88260dcabbc7202429d31 333 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 18 328 1.1E-142 T 11-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 IX88_13260 0bf4289c8a81f39bb8233cd86ed2bf11 432 SUPERFAMILY SSF56112 79 351 2.4E-23 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily IX88_13260 0bf4289c8a81f39bb8233cd86ed2bf11 432 Pfam PF03109 ABC1 family 99 217 2.7E-31 T 11-10-2018 IPR004147 UbiB domain IX88_04880 b343f31b25f8de99d5085eeb222a0a56 664 Pfam PF12704 MacB-like periplasmic core domain 286 505 2.6E-40 T 11-10-2018 IPR025857 MacB-like periplasmic core domain IX88_04880 b343f31b25f8de99d5085eeb222a0a56 664 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_04880 b343f31b25f8de99d5085eeb222a0a56 664 Pfam PF02687 FtsX-like permease family 568 657 3.1E-13 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 IX88_04880 b343f31b25f8de99d5085eeb222a0a56 664 Gene3D G3DSA:3.40.50.300 4 288 6.1E-69 T 11-10-2018 IX88_04880 b343f31b25f8de99d5085eeb222a0a56 664 SMART SM00382 35 229 1.0E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_04880 b343f31b25f8de99d5085eeb222a0a56 664 Pfam PF00005 ABC transporter 26 174 7.2E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_04880 b343f31b25f8de99d5085eeb222a0a56 664 SUPERFAMILY SSF52540 6 227 1.08E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_18110 7860f6b97d8554dfa5e14d868eadd002 237 Pfam PF11306 Protein of unknown function (DUF3108) 26 232 1.3E-23 T 11-10-2018 IPR021457 Protein of unknown function DUF3108 IX88_10285 3445df5bf36130ec4d28ef415a5b5adf 585 SMART SM00382 39 224 3.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_10285 3445df5bf36130ec4d28ef415a5b5adf 585 SMART SM00382 364 543 3.9E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_10285 3445df5bf36130ec4d28ef415a5b5adf 585 SUPERFAMILY SSF52540 339 556 9.24E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_10285 3445df5bf36130ec4d28ef415a5b5adf 585 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_10285 3445df5bf36130ec4d28ef415a5b5adf 585 Gene3D G3DSA:3.40.50.300 2 249 6.0E-60 T 11-10-2018 IX88_10285 3445df5bf36130ec4d28ef415a5b5adf 585 Gene3D G3DSA:3.40.50.300 327 572 4.6E-64 T 11-10-2018 IX88_10285 3445df5bf36130ec4d28ef415a5b5adf 585 Pfam PF00005 ABC transporter 32 173 2.9E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_10285 3445df5bf36130ec4d28ef415a5b5adf 585 Pfam PF00005 ABC transporter 356 497 1.1E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_10285 3445df5bf36130ec4d28ef415a5b5adf 585 SUPERFAMILY SSF52540 22 233 1.73E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_02470 257a32293f945e2ed4c4858a6e62be42 451 Gene3D G3DSA:3.40.630.30 298 450 2.1E-39 T 11-10-2018 IX88_02470 257a32293f945e2ed4c4858a6e62be42 451 SUPERFAMILY SSF55729 301 428 7.55E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_02470 257a32293f945e2ed4c4858a6e62be42 451 Pfam PF00696 Amino acid kinase family 33 272 8.5E-26 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 IX88_02470 257a32293f945e2ed4c4858a6e62be42 451 Pfam PF00583 Acetyltransferase (GNAT) family 331 410 7.1E-11 T 11-10-2018 IPR000182 GNAT domain IX88_02470 257a32293f945e2ed4c4858a6e62be42 451 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 16 449 3.7E-182 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 IX88_02470 257a32293f945e2ed4c4858a6e62be42 451 PIRSF PIRSF000423 6 450 5.8E-193 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 IX88_02470 257a32293f945e2ed4c4858a6e62be42 451 Gene3D G3DSA:3.40.1160.10 14 297 2.3E-91 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily IX88_02470 257a32293f945e2ed4c4858a6e62be42 451 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 450 208.102 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 IX88_02470 257a32293f945e2ed4c4858a6e62be42 451 SUPERFAMILY SSF53633 11 297 7.96E-73 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily IX88_17775 e258b0c4336090856907380c4ebba6ec 303 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 281 7.0E-62 T 11-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 IX88_10960 6ad02f1ff411602bf37e920983630aba 331 Gene3D G3DSA:3.40.190.170 55 243 5.8E-10 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily IX88_05635 0daec2c3ee4d5a5f3f593174dbd2edf4 347 PIRSF PIRSF005632 1 343 1.9E-198 T 11-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit IX88_05635 0daec2c3ee4d5a5f3f593174dbd2edf4 347 SUPERFAMILY SSF51726 7 341 4.19E-69 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 IX88_05635 0daec2c3ee4d5a5f3f593174dbd2edf4 347 Gene3D G3DSA:3.20.20.210 1 343 3.4E-135 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 IX88_05635 0daec2c3ee4d5a5f3f593174dbd2edf4 347 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 2.4E-36 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 IX88_15385 41dca4223d3bdb05c735f534d77352ed 162 Gene3D G3DSA:3.90.79.10 1 151 3.7E-38 T 11-10-2018 IX88_15385 41dca4223d3bdb05c735f534d77352ed 162 Pfam PF00293 NUDIX domain 7 127 5.6E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 IX88_15385 41dca4223d3bdb05c735f534d77352ed 162 SUPERFAMILY SSF55811 3 146 2.71E-30 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 IX88_15385 41dca4223d3bdb05c735f534d77352ed 162 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 IX88_09025 4e95e76e6bd2c814caa0dfcded29489d 301 Gene3D G3DSA:3.40.190.290 95 300 2.5E-48 T 11-10-2018 IX88_09025 4e95e76e6bd2c814caa0dfcded29489d 301 SUPERFAMILY SSF53850 95 298 2.95E-41 T 11-10-2018 IX88_09025 4e95e76e6bd2c814caa0dfcded29489d 301 SUPERFAMILY SSF46785 3 91 2.16E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_09025 4e95e76e6bd2c814caa0dfcded29489d 301 Gene3D G3DSA:1.10.10.10 1 84 4.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_09025 4e95e76e6bd2c814caa0dfcded29489d 301 Pfam PF03466 LysR substrate binding domain 92 296 5.9E-46 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_09025 4e95e76e6bd2c814caa0dfcded29489d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_09025 4e95e76e6bd2c814caa0dfcded29489d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_09025 4e95e76e6bd2c814caa0dfcded29489d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_09025 4e95e76e6bd2c814caa0dfcded29489d 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 67 2.8E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_17980 06a687613cf93905590ee00f978e92e8 537 SUPERFAMILY SSF52096 278 534 2.26E-73 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_17980 06a687613cf93905590ee00f978e92e8 537 Gene3D G3DSA:3.90.226.10 272 537 4.4E-90 T 11-10-2018 IX88_17980 06a687613cf93905590ee00f978e92e8 537 Gene3D G3DSA:3.90.226.10 1 271 3.7E-68 T 11-10-2018 IX88_17980 06a687613cf93905590ee00f978e92e8 537 Pfam PF01039 Carboxyl transferase domain 49 524 9.2E-120 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 IX88_17980 06a687613cf93905590ee00f978e92e8 537 SUPERFAMILY SSF52096 44 275 4.98E-56 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_04560 f05c7cebcaf4f974043fbe2679d51fe2 251 Gene3D G3DSA:3.30.1150.10 129 249 2.8E-12 T 11-10-2018 IX88_04560 f05c7cebcaf4f974043fbe2679d51fe2 251 SUPERFAMILY SSF74653 151 251 1.83E-14 T 11-10-2018 IX88_04560 f05c7cebcaf4f974043fbe2679d51fe2 251 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 186 247 6.0E-13 T 11-10-2018 IPR006260 TonB/TolA, C-terminal IX88_04560 f05c7cebcaf4f974043fbe2679d51fe2 251 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 189 247 2.6E-12 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 IX88_13395 f659c677cf974c12fb95763dc98fb530 109 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 6.1E-38 T 11-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 IX88_13395 f659c677cf974c12fb95763dc98fb530 109 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 92 5.2E-17 T 11-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 IX88_01910 5a2e02811ffe603e24497a5cc4a83971 239 Gene3D G3DSA:3.30.470.20 85 220 5.9E-95 T 11-10-2018 IX88_01910 5a2e02811ffe603e24497a5cc4a83971 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 31.567 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 IX88_01910 5a2e02811ffe603e24497a5cc4a83971 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 IX88_01910 5a2e02811ffe603e24497a5cc4a83971 239 SUPERFAMILY SSF56104 2 232 4.9E-82 T 11-10-2018 IX88_01910 5a2e02811ffe603e24497a5cc4a83971 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 234 9.5E-79 T 11-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 IX88_01910 5a2e02811ffe603e24497a5cc4a83971 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 IX88_01910 5a2e02811ffe603e24497a5cc4a83971 239 Pfam PF01259 SAICAR synthetase 7 231 5.3E-66 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 IX88_01910 5a2e02811ffe603e24497a5cc4a83971 239 Gene3D G3DSA:3.30.200.20 7 231 5.9E-95 T 11-10-2018 IX88_01540 0e89bc3d9551f854332303ab6a3869ad 167 TIGRFAM TIGR03180 UraD_2: OHCU decarboxylase 6 164 9.9E-55 T 11-10-2018 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 IX88_01540 0e89bc3d9551f854332303ab6a3869ad 167 Pfam PF09349 OHCU decarboxylase 7 161 1.1E-33 T 11-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 IX88_01540 0e89bc3d9551f854332303ab6a3869ad 167 Gene3D G3DSA:1.10.3330.10 1 166 1.2E-45 T 11-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 IX88_01540 0e89bc3d9551f854332303ab6a3869ad 167 SUPERFAMILY SSF158694 3 163 3.79E-40 T 11-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 IX88_16595 dd0de9bd5a380c96ca174b5aa46ecd37 195 Gene3D G3DSA:1.20.120.20 2 128 4.4E-12 T 11-10-2018 IX88_16595 dd0de9bd5a380c96ca174b5aa46ecd37 195 SUPERFAMILY SSF58113 10 180 3.92E-8 T 11-10-2018 IX88_09540 43b7210f244b4ea6041b8069db4d2a5c 178 Gene3D G3DSA:2.60.40.1090 21 178 1.9E-37 T 11-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 IX88_09540 43b7210f244b4ea6041b8069db4d2a5c 178 Pfam PF16970 Type-1 fimbrial protein, A 49 178 1.4E-25 T 11-10-2018 IPR039458 Type-1 fimbrial protein, A IX88_09540 43b7210f244b4ea6041b8069db4d2a5c 178 SUPERFAMILY SSF49401 24 178 8.95E-30 T 11-10-2018 IPR008966 Adhesion domain superfamily IX88_14965 967c9f7167a4e4b584857ba0a49400f3 135 Gene3D G3DSA:3.30.40.60 1 106 1.2E-11 T 11-10-2018 IX88_14965 967c9f7167a4e4b584857ba0a49400f3 135 SMART SM00507 6 75 4.1E-4 T 11-10-2018 IPR003615 HNH nuclease IX88_04810 b12bad0fdbd42ccf3c9276a7b0239cf8 371 Gene3D G3DSA:3.30.413.10 261 361 1.8E-27 T 11-10-2018 IX88_04810 b12bad0fdbd42ccf3c9276a7b0239cf8 371 Pfam PF04551 GcpE protein 11 352 8.1E-133 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 IX88_04810 b12bad0fdbd42ccf3c9276a7b0239cf8 371 PIRSF PIRSF004640 1 362 1.0E-146 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 IX88_04810 b12bad0fdbd42ccf3c9276a7b0239cf8 371 SUPERFAMILY SSF56014 264 352 1.36E-13 T 11-10-2018 IX88_04810 b12bad0fdbd42ccf3c9276a7b0239cf8 371 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 8 351 4.6E-130 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 IX88_04810 b12bad0fdbd42ccf3c9276a7b0239cf8 371 SUPERFAMILY SSF51717 15 208 1.73E-10 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_04810 b12bad0fdbd42ccf3c9276a7b0239cf8 371 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 6 362 34.66 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 IX88_04810 b12bad0fdbd42ccf3c9276a7b0239cf8 371 Gene3D G3DSA:3.20.20.20 1 260 1.1E-103 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 IX88_13245 ec2118632db82f0a6d9cbf65a335975d 569 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 3 565 1.4E-161 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 IX88_13245 ec2118632db82f0a6d9cbf65a335975d 569 PIRSF PIRSF001294 1 568 4.0E-217 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 IX88_13245 ec2118632db82f0a6d9cbf65a335975d 569 Pfam PF03814 Potassium-transporting ATPase A subunit 6 564 2.2E-212 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 IX88_13245 ec2118632db82f0a6d9cbf65a335975d 569 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 566 27.79 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 IX88_05740 64d8e1e5a1591699a8a1b73cacea6071 183 Gene3D G3DSA:1.20.58.1610 2 121 6.9E-31 T 11-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05740 64d8e1e5a1591699a8a1b73cacea6071 183 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 23 120 3.0E-25 T 11-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_05740 64d8e1e5a1591699a8a1b73cacea6071 183 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 17.894 T 11-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 IX88_12530 89396c04b5ec445cd1ba31d5dbd01b9c 158 Gene3D G3DSA:3.40.960.10 33 143 7.4E-7 T 11-10-2018 IX88_09860 7e864db2552f7e6d4716a1fdacde2d16 373 Gene3D G3DSA:3.90.226.10 12 349 8.0E-91 T 11-10-2018 IX88_09860 7e864db2552f7e6d4716a1fdacde2d16 373 Pfam PF16113 Enoyl-CoA hydratase/isomerase 23 340 9.1E-87 T 11-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 IX88_09860 7e864db2552f7e6d4716a1fdacde2d16 373 SUPERFAMILY SSF52096 12 342 1.72E-52 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily IX88_02350 cecf1c3d4003f4e487c4a4f7932a68f2 288 SUPERFAMILY SSF56281 39 246 7.56E-31 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_02350 cecf1c3d4003f4e487c4a4f7932a68f2 288 Gene3D G3DSA:3.60.15.10 28 257 2.3E-21 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_02350 cecf1c3d4003f4e487c4a4f7932a68f2 288 SMART SM00849 41 222 2.0E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_11010 714cab93894cb828b554966d56305c2d 102 Gene3D G3DSA:1.10.260.40 24 98 4.9E-9 T 11-10-2018 IX88_11010 714cab93894cb828b554966d56305c2d 102 SUPERFAMILY SSF47413 26 86 4.02E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IX88_11010 714cab93894cb828b554966d56305c2d 102 Pfam PF01381 Helix-turn-helix 36 83 1.0E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IX88_11010 714cab93894cb828b554966d56305c2d 102 SMART SM00530 31 87 8.0E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IX88_15655 d8c0e77a1c77d235b7ed2a84171027ae 378 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 6 375 1.3E-131 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 IX88_15655 d8c0e77a1c77d235b7ed2a84171027ae 378 Gene3D G3DSA:3.40.50.2000 6 371 7.0E-132 T 11-10-2018 IX88_15655 d8c0e77a1c77d235b7ed2a84171027ae 378 SUPERFAMILY SSF53756 6 375 5.76E-113 T 11-10-2018 IX88_15655 d8c0e77a1c77d235b7ed2a84171027ae 378 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 373 8.7E-112 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 IX88_15655 d8c0e77a1c77d235b7ed2a84171027ae 378 Gene3D G3DSA:3.40.50.2000 191 360 7.0E-132 T 11-10-2018 IX88_07340 258d8b6ac16a6f78eea88560b2150e57 414 Gene3D G3DSA:3.20.20.70 1 350 1.7E-118 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_07340 258d8b6ac16a6f78eea88560b2150e57 414 SUPERFAMILY SSF51395 1 348 2.69E-105 T 11-10-2018 IX88_07340 258d8b6ac16a6f78eea88560b2150e57 414 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 341 1.3E-60 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 IX88_17640 c4ffe6017bb12cdff8b9e61ad9a85288 254 Pfam PF13803 Domain of unknown function (DUF4184) 1 212 1.0E-42 T 11-10-2018 IPR025238 Protein of unknown function DUF4184 IX88_04195 8ef89813edba684d6175b60182d13f06 334 Pfam PF13271 Domain of unknown function (DUF4062) 7 85 4.0E-12 T 11-10-2018 IPR025139 Domain of unknown function DUF4062 IX88_07700 1a404d1401f5bc2b71923907f2c84ee2 476 Gene3D G3DSA:3.40.605.10 10 469 2.0E-161 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_07700 1a404d1401f5bc2b71923907f2c84ee2 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 IX88_07700 1a404d1401f5bc2b71923907f2c84ee2 476 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 IX88_07700 1a404d1401f5bc2b71923907f2c84ee2 476 Gene3D G3DSA:3.40.309.10 253 441 2.0E-161 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_07700 1a404d1401f5bc2b71923907f2c84ee2 476 Pfam PF00171 Aldehyde dehydrogenase family 15 471 3.5E-156 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_07700 1a404d1401f5bc2b71923907f2c84ee2 476 SUPERFAMILY SSF53720 4 473 6.15E-155 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 SMART SM00228 368 448 1.8E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 SMART SM00228 257 339 1.9E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 27 452 1.7E-137 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 Gene3D G3DSA:2.30.42.10 365 458 5.2E-13 T 11-10-2018 IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 Gene3D G3DSA:2.30.42.10 252 355 8.2E-30 T 11-10-2018 IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 PRINTS PR00834 HtrA/DegQ protease family signature 211 228 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 PRINTS PR00834 HtrA/DegQ protease family signature 189 206 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 PRINTS PR00834 HtrA/DegQ protease family signature 115 135 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 PRINTS PR00834 HtrA/DegQ protease family signature 155 179 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 PRINTS PR00834 HtrA/DegQ protease family signature 94 106 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 SUPERFAMILY SSF50156 367 455 3.29E-13 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 Pfam PF13180 PDZ domain 368 451 4.1E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 Pfam PF13180 PDZ domain 258 348 1.1E-18 T 11-10-2018 IPR001478 PDZ domain GO:0005515 IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 SUPERFAMILY SSF50494 1 266 1.35E-62 T 11-10-2018 IPR009003 Peptidase S1, PA clan IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 Pfam PF13365 Trypsin-like peptidase domain 85 218 3.2E-34 T 11-10-2018 IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 SUPERFAMILY SSF50156 238 347 4.85E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 IX88_15825 ad55b41de2450bcc215a8eb2125611b7 458 Gene3D G3DSA:2.40.10.120 26 250 2.4E-75 T 11-10-2018 IX88_16890 df825969a62467ab78ba623f28df98ab 194 Pfam PF13649 Methyltransferase domain 33 123 2.2E-8 T 11-10-2018 IX88_16890 df825969a62467ab78ba623f28df98ab 194 SUPERFAMILY SSF53335 18 156 1.34E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_16890 df825969a62467ab78ba623f28df98ab 194 Gene3D G3DSA:3.40.50.150 5 181 2.4E-17 T 11-10-2018 IX88_02495 adbfac49cfed4c003580e373601444a0 232 Gene3D G3DSA:1.10.150.240 16 84 3.9E-51 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IX88_02495 adbfac49cfed4c003580e373601444a0 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 184 9.8E-36 T 11-10-2018 IX88_02495 adbfac49cfed4c003580e373601444a0 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 184 3.8E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IX88_02495 adbfac49cfed4c003580e373601444a0 232 SUPERFAMILY SSF56784 1 217 1.42E-54 T 11-10-2018 IPR036412 HAD-like superfamily IX88_02495 adbfac49cfed4c003580e373601444a0 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 9.7E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IX88_02495 adbfac49cfed4c003580e373601444a0 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 9.7E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IX88_02495 adbfac49cfed4c003580e373601444a0 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 9.7E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IX88_02495 adbfac49cfed4c003580e373601444a0 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 9.7E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IX88_02495 adbfac49cfed4c003580e373601444a0 232 Gene3D G3DSA:3.40.50.1000 4 191 3.9E-51 T 11-10-2018 IPR023214 HAD superfamily IX88_02495 adbfac49cfed4c003580e373601444a0 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 88 178 3.9E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 IX88_04755 51c04bf0398ae32a884bbaa3addf39ac 437 Pfam PF00561 alpha/beta hydrolase fold 58 293 1.6E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_04755 51c04bf0398ae32a884bbaa3addf39ac 437 SUPERFAMILY SSF141371 325 430 5.1E-5 T 11-10-2018 IX88_04755 51c04bf0398ae32a884bbaa3addf39ac 437 Gene3D G3DSA:3.40.50.1820 26 308 2.2E-28 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_04755 51c04bf0398ae32a884bbaa3addf39ac 437 SUPERFAMILY SSF53474 35 307 8.25E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_11865 0b3d9d626a2b311f9c35222c8a11b0b7 143 Pfam PF00571 CBS domain 16 59 1.4E-9 T 11-10-2018 IPR000644 CBS domain IX88_11865 0b3d9d626a2b311f9c35222c8a11b0b7 143 Pfam PF00571 CBS domain 73 127 2.4E-13 T 11-10-2018 IPR000644 CBS domain IX88_11865 0b3d9d626a2b311f9c35222c8a11b0b7 143 SUPERFAMILY SSF54631 15 128 1.52E-33 T 11-10-2018 IX88_11865 0b3d9d626a2b311f9c35222c8a11b0b7 143 Gene3D G3DSA:3.10.580.10 1 143 3.3E-45 T 11-10-2018 IX88_11865 0b3d9d626a2b311f9c35222c8a11b0b7 143 SMART SM00116 80 127 3.0E-9 T 11-10-2018 IPR000644 CBS domain IX88_11865 0b3d9d626a2b311f9c35222c8a11b0b7 143 SMART SM00116 15 62 1.7E-6 T 11-10-2018 IPR000644 CBS domain IX88_12355 d97e6a930f0c3e91b4e6e5e9ae4a0b88 186 Pfam PF14301 Domain of unknown function (DUF4376) 88 183 1.9E-19 T 11-10-2018 IPR025484 Domain of unknown function DUF4376 IX88_08690 706d361b904af2c2221f47b46c07b14a 405 Gene3D G3DSA:3.40.50.10540 4 398 3.5E-138 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily IX88_08690 706d361b904af2c2221f47b46c07b14a 405 SUPERFAMILY SSF89796 1 404 1.29E-139 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily IX88_08690 706d361b904af2c2221f47b46c07b14a 405 Gene3D G3DSA:3.30.1540.10 242 333 3.5E-138 T 11-10-2018 IX88_08690 706d361b904af2c2221f47b46c07b14a 405 Pfam PF02515 CoA-transferase family III 4 382 7.0E-133 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 IX88_11820 af8b5708ef1a593c8273a2491ce823b9 98 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 19 95 8.2E-24 T 11-10-2018 IPR011846 Cyd operon protein YbgE IX88_10745 fa4e7f797d0cdfb182d21458d09beb5b 133 SUPERFAMILY SSF46785 16 131 6.34E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_10745 fa4e7f797d0cdfb182d21458d09beb5b 133 Gene3D G3DSA:1.10.10.10 6 80 8.9E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_10745 fa4e7f797d0cdfb182d21458d09beb5b 133 Pfam PF01475 Ferric uptake regulator family 11 131 1.1E-15 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 IX88_12360 769e33b59876cd3cd6b542f1f6e57402 1466 Pfam PF13550 Putative phage tail protein 344 503 6.3E-20 T 11-10-2018 IPR032876 Tip attachment protein J IX88_13140 7e5ba3702403b0665cf5f04570ee475c 234 Gene3D G3DSA:3.30.70.1560 129 210 2.7E-49 T 11-10-2018 IX88_13140 7e5ba3702403b0665cf5f04570ee475c 234 Pfam PF01479 S4 domain 3 43 1.4E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_13140 7e5ba3702403b0665cf5f04570ee475c 234 Gene3D G3DSA:3.30.70.580 62 226 2.7E-49 T 11-10-2018 IX88_13140 7e5ba3702403b0665cf5f04570ee475c 234 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 67 223 8.8E-40 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 IX88_13140 7e5ba3702403b0665cf5f04570ee475c 234 SUPERFAMILY SSF55174 3 84 1.62E-8 T 11-10-2018 IX88_13140 7e5ba3702403b0665cf5f04570ee475c 234 SMART SM00363 1 64 0.0022 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 IX88_13140 7e5ba3702403b0665cf5f04570ee475c 234 Gene3D G3DSA:3.10.290.10 2 59 1.8E-9 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 IX88_13140 7e5ba3702403b0665cf5f04570ee475c 234 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 IX88_13140 7e5ba3702403b0665cf5f04570ee475c 234 Pfam PF00849 RNA pseudouridylate synthase 62 192 4.4E-14 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_13140 7e5ba3702403b0665cf5f04570ee475c 234 SUPERFAMILY SSF55120 61 226 1.01E-37 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_12140 4b38eda6eafa5004acacf44d912d33ac 414 Gene3D G3DSA:3.30.9.10 133 368 1.7E-34 T 11-10-2018 IX88_12140 4b38eda6eafa5004acacf44d912d33ac 414 SUPERFAMILY SSF54373 277 369 1.26E-9 T 11-10-2018 IX88_12140 4b38eda6eafa5004acacf44d912d33ac 414 Gene3D G3DSA:3.50.50.60 107 406 1.7E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_12140 4b38eda6eafa5004acacf44d912d33ac 414 Gene3D G3DSA:3.50.50.60 4 51 4.5E-11 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_12140 4b38eda6eafa5004acacf44d912d33ac 414 Pfam PF01266 FAD dependent oxidoreductase 3 405 2.2E-54 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 IX88_12140 4b38eda6eafa5004acacf44d912d33ac 414 SUPERFAMILY SSF51905 1 412 1.55E-40 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_15350 4672a7ef20e817fb9f6b9de18f829aad 309 SUPERFAMILY SSF46785 4 112 1.7E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_15350 4672a7ef20e817fb9f6b9de18f829aad 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.0E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_15350 4672a7ef20e817fb9f6b9de18f829aad 309 Gene3D G3DSA:1.10.10.10 3 90 3.9E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_15350 4672a7ef20e817fb9f6b9de18f829aad 309 Pfam PF03466 LysR substrate binding domain 92 296 4.0E-27 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_15350 4672a7ef20e817fb9f6b9de18f829aad 309 SUPERFAMILY SSF53850 90 300 1.38E-32 T 11-10-2018 IX88_15350 4672a7ef20e817fb9f6b9de18f829aad 309 Gene3D G3DSA:3.40.190.290 93 296 5.5E-43 T 11-10-2018 IX88_16790 c93f5687e31c698808842be7dc7dbd5c 157 SUPERFAMILY SSF75217 2 155 4.38E-43 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases IX88_16790 c93f5687e31c698808842be7dc7dbd5c 157 PIRSF PIRSF029256 1 157 2.8E-60 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 IX88_16790 c93f5687e31c698808842be7dc7dbd5c 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 154 30.544 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 IX88_16790 c93f5687e31c698808842be7dc7dbd5c 157 Gene3D G3DSA:3.40.1280.10 1 156 1.6E-58 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IX88_16790 c93f5687e31c698808842be7dc7dbd5c 157 Pfam PF00588 SpoU rRNA Methylase family 2 145 1.9E-34 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 IX88_13685 699de098b79739518680dc27a97896e4 339 SMART SM00972 270 336 1.6E-12 T 11-10-2018 IPR007893 Spore coat protein U IX88_13685 699de098b79739518680dc27a97896e4 339 SUPERFAMILY SSF49401 19 151 2.3E-5 T 11-10-2018 IPR008966 Adhesion domain superfamily IX88_13685 699de098b79739518680dc27a97896e4 339 Pfam PF05229 Spore Coat Protein U domain 200 335 6.0E-24 T 11-10-2018 IPR007893 Spore coat protein U IX88_13315 8b32902e1507499b8d9b33f39303ba44 279 Pfam PF17124 ThiJ/PfpI family-like 45 180 9.2E-13 T 11-10-2018 IPR032633 ThiJ/PfpI family-like IX88_13315 8b32902e1507499b8d9b33f39303ba44 279 SUPERFAMILY SSF52317 24 278 6.88E-54 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_13315 8b32902e1507499b8d9b33f39303ba44 279 Gene3D G3DSA:3.40.50.880 6 279 1.1E-77 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_08920 2c89017037870674c929aa59904cf581 203 Pfam PF01810 LysE type translocator 16 200 1.0E-23 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_15710 fef07aa052accfe745c3d681ecbb49fe 485 SUPERFAMILY SSF55347 292 455 2.74E-55 T 11-10-2018 IX88_15710 fef07aa052accfe745c3d681ecbb49fe 485 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 297 454 2.6E-47 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_15710 fef07aa052accfe745c3d681ecbb49fe 485 SMART SM00846 131 292 1.1E-51 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_15710 fef07aa052accfe745c3d681ecbb49fe 485 Gene3D G3DSA:3.40.50.720 133 467 3.4E-114 T 11-10-2018 IX88_15710 fef07aa052accfe745c3d681ecbb49fe 485 SUPERFAMILY SSF51735 132 308 9.98E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_15710 fef07aa052accfe745c3d681ecbb49fe 485 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 290 297 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_15710 fef07aa052accfe745c3d681ecbb49fe 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 286 304 1.6E-19 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_15710 fef07aa052accfe745c3d681ecbb49fe 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 250 263 1.6E-19 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_15710 fef07aa052accfe745c3d681ecbb49fe 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 313 329 1.6E-19 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_15710 fef07aa052accfe745c3d681ecbb49fe 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 369 386 1.6E-19 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_15710 fef07aa052accfe745c3d681ecbb49fe 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 410 425 1.6E-19 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_15710 fef07aa052accfe745c3d681ecbb49fe 485 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 132 242 5.4E-21 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_15710 fef07aa052accfe745c3d681ecbb49fe 485 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 133 466 2.3E-112 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 IX88_15710 fef07aa052accfe745c3d681ecbb49fe 485 Gene3D G3DSA:3.30.360.10 291 456 3.4E-114 T 11-10-2018 IX88_08665 ddd9df9a8ba9ed367659c423bb881117 384 Gene3D G3DSA:3.50.50.60 7 376 2.0E-39 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_08665 ddd9df9a8ba9ed367659c423bb881117 384 Pfam PF01266 FAD dependent oxidoreductase 7 374 2.3E-33 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 IX88_08665 ddd9df9a8ba9ed367659c423bb881117 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.1E-5 T 11-10-2018 IX88_08665 ddd9df9a8ba9ed367659c423bb881117 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.1E-5 T 11-10-2018 IX88_08665 ddd9df9a8ba9ed367659c423bb881117 384 SUPERFAMILY SSF51905 5 218 1.17E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_08665 ddd9df9a8ba9ed367659c423bb881117 384 TIGRFAM TIGR03364 HpnW_proposed: FAD dependent oxidoreductase TIGR03364 7 376 6.0E-89 T 11-10-2018 IPR017741 FAD-dependent oxidoreductase, HpnW IX88_08665 ddd9df9a8ba9ed367659c423bb881117 384 Gene3D G3DSA:3.30.9.10 87 343 2.0E-39 T 11-10-2018 IX88_11120 b737279c89d8c0a1e3aefea8ee0dd050 350 SUPERFAMILY SSF51735 152 312 8.66E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_11120 b737279c89d8c0a1e3aefea8ee0dd050 350 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 146 8.4E-27 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 IX88_11120 b737279c89d8c0a1e3aefea8ee0dd050 350 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 IX88_11120 b737279c89d8c0a1e3aefea8ee0dd050 350 Gene3D G3DSA:3.40.50.720 168 321 2.2E-133 T 11-10-2018 IX88_11120 b737279c89d8c0a1e3aefea8ee0dd050 350 SUPERFAMILY SSF50129 12 176 2.2E-50 T 11-10-2018 IPR011032 GroES-like superfamily IX88_11120 b737279c89d8c0a1e3aefea8ee0dd050 350 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 180 207 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 IX88_11120 b737279c89d8c0a1e3aefea8ee0dd050 350 SMART SM00829 9 342 4.5E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 IX88_11120 b737279c89d8c0a1e3aefea8ee0dd050 350 Gene3D G3DSA:3.90.180.10 12 341 2.2E-133 T 11-10-2018 IX88_11120 b737279c89d8c0a1e3aefea8ee0dd050 350 Pfam PF00107 Zinc-binding dehydrogenase 187 306 1.1E-21 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 IX88_07995 db9f36f8879c2b7bce11ffd6933a8bcd 140 Gene3D G3DSA:2.20.25.10 1 32 3.0E-8 T 11-10-2018 IX88_07995 db9f36f8879c2b7bce11ffd6933a8bcd 140 Gene3D G3DSA:3.30.300.20 39 139 5.3E-29 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta IX88_07995 db9f36f8879c2b7bce11ffd6933a8bcd 140 SUPERFAMILY SSF82784 1 138 4.32E-40 T 11-10-2018 IPR036102 OsmC/Ohr superfamily IX88_07995 db9f36f8879c2b7bce11ffd6933a8bcd 140 Pfam PF02566 OsmC-like protein 33 132 1.4E-19 T 11-10-2018 IPR003718 OsmC/Ohr family IX88_07860 af2133c19173c90f0f7df06c725cd5ef 495 Pfam PF00743 Flavin-binding monooxygenase-like 13 346 1.9E-18 T 11-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 IX88_07860 af2133c19173c90f0f7df06c725cd5ef 495 Gene3D G3DSA:3.50.50.60 1 176 9.5E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07860 af2133c19173c90f0f7df06c725cd5ef 495 SUPERFAMILY SSF51905 10 479 7.54E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07860 af2133c19173c90f0f7df06c725cd5ef 495 SUPERFAMILY SSF51905 278 489 4.23E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07860 af2133c19173c90f0f7df06c725cd5ef 495 Gene3D G3DSA:3.50.50.60 298 493 4.1E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_05800 90e191aec694c26be4ab12fde37a9aaa 498 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 8 478 17.417 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 IX88_05800 90e191aec694c26be4ab12fde37a9aaa 498 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 11 478 1.3E-122 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 IX88_05800 90e191aec694c26be4ab12fde37a9aaa 498 Pfam PF00361 Proton-conducting membrane transporter 127 423 3.8E-72 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 IX88_09625 415b2f25a3dd0d1267dc1237873146ef 196 Pfam PF04970 Lecithin retinol acyltransferase 9 107 1.2E-15 T 11-10-2018 IPR007053 LRAT-like domain IX88_15915 f2c88ceb7b2671ad0f5b5af3e7fb7c7d 153 Pfam PF00578 AhpC/TSA family 11 128 7.8E-26 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 IX88_15915 f2c88ceb7b2671ad0f5b5af3e7fb7c7d 153 Gene3D G3DSA:3.40.30.10 4 151 1.5E-35 T 11-10-2018 IX88_15915 f2c88ceb7b2671ad0f5b5af3e7fb7c7d 153 SUPERFAMILY SSF52833 6 151 2.4E-39 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_15915 f2c88ceb7b2671ad0f5b5af3e7fb7c7d 153 PIRSF PIRSF000239 4 153 1.6E-23 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 IX88_10555 6f3ec2015aa8ed2b0da754dec4e15735 476 SUPERFAMILY SSF160387 383 472 7.32E-10 T 11-10-2018 IX88_10555 6f3ec2015aa8ed2b0da754dec4e15735 476 Gene3D G3DSA:3.40.190.10 73 291 1.7E-41 T 11-10-2018 IX88_10555 6f3ec2015aa8ed2b0da754dec4e15735 476 SUPERFAMILY SSF53850 57 336 1.6E-39 T 11-10-2018 IX88_10555 6f3ec2015aa8ed2b0da754dec4e15735 476 Gene3D G3DSA:3.40.190.10 132 232 1.7E-41 T 11-10-2018 IX88_10555 6f3ec2015aa8ed2b0da754dec4e15735 476 Pfam PF13379 NMT1-like family 75 276 1.6E-12 T 11-10-2018 IX88_10310 4be74a636fbec8f161c3fe89b0ed3f9b 196 Pfam PF06078 Bacterial protein of unknown function (DUF937) 17 171 2.0E-18 T 11-10-2018 IPR009282 Protein of unknown function DUF937 IX88_10310 4be74a636fbec8f161c3fe89b0ed3f9b 196 Gene3D G3DSA:1.10.10.690 50 196 1.3E-28 T 11-10-2018 IPR027405 YidB-like IX88_10310 4be74a636fbec8f161c3fe89b0ed3f9b 196 SUPERFAMILY SSF140804 54 195 1.09E-28 T 11-10-2018 IPR027405 YidB-like IX88_06990 931e04fdbd921f77c625f5532e432f01 54 PRINTS PR00163 Rubredoxin signature 3 19 8.8E-11 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 IX88_06990 931e04fdbd921f77c625f5532e432f01 54 PRINTS PR00163 Rubredoxin signature 33 49 8.8E-11 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 IX88_06990 931e04fdbd921f77c625f5532e432f01 54 Gene3D G3DSA:2.20.28.10 1 54 1.7E-29 T 11-10-2018 IX88_06990 931e04fdbd921f77c625f5532e432f01 54 SUPERFAMILY SSF57802 1 53 1.65E-23 T 11-10-2018 IX88_06990 931e04fdbd921f77c625f5532e432f01 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 11-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 IX88_06990 931e04fdbd921f77c625f5532e432f01 54 PIRSF PIRSF000071 1 54 3.1E-26 T 11-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 IX88_06990 931e04fdbd921f77c625f5532e432f01 54 Pfam PF00301 Rubredoxin 3 49 3.2E-25 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 IX88_14405 3804eca595fb1b3e29fe48933f0311ec 90 Pfam PF07023 Protein of unknown function (DUF1315) 4 83 8.5E-33 T 11-10-2018 IPR009749 Protein of unknown function DUF1315 IX88_01180 583be5a382c3c5a6a589c30a8ce1747f 482 Gene3D G3DSA:3.40.605.10 22 471 4.6E-173 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 IX88_01180 583be5a382c3c5a6a589c30a8ce1747f 482 Gene3D G3DSA:3.40.309.10 259 448 4.6E-173 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 IX88_01180 583be5a382c3c5a6a589c30a8ce1747f 482 Pfam PF00171 Aldehyde dehydrogenase family 23 475 2.1E-160 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 IX88_01180 583be5a382c3c5a6a589c30a8ce1747f 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 28 474 5.1E-210 T 11-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 IX88_01180 583be5a382c3c5a6a589c30a8ce1747f 482 SUPERFAMILY SSF53720 20 479 2.36E-162 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 IX88_01180 583be5a382c3c5a6a589c30a8ce1747f 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 IX88_01180 583be5a382c3c5a6a589c30a8ce1747f 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 IX88_17945 3579afc6a353333caf8033bee1297eeb 128 SUPERFAMILY SSF54211 4 128 1.18E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_17945 3579afc6a353333caf8033bee1297eeb 128 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 128 31.08 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid IX88_17945 3579afc6a353333caf8033bee1297eeb 128 ProSitePatterns PS00360 Ribosomal protein S9 signature. 67 85 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 IX88_17945 3579afc6a353333caf8033bee1297eeb 128 Gene3D G3DSA:3.30.230.10 2 128 3.4E-50 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IX88_17945 3579afc6a353333caf8033bee1297eeb 128 Pfam PF00380 Ribosomal protein S9/S16 8 128 3.5E-44 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 IX88_07980 c76c1fdd1969ae4eb23ab45f1df5f075 261 Pfam PF01435 Peptidase family M48 77 248 4.1E-33 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 IX88_16510 f1bb8692dd238edf5783662b9dcbdc30 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 255 3.5E-89 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 IX88_16510 f1bb8692dd238edf5783662b9dcbdc30 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 264 453 1.6E-64 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 IX88_16510 f1bb8692dd238edf5783662b9dcbdc30 502 SUPERFAMILY SSF53067 257 500 5.44E-86 T 11-10-2018 IX88_16510 f1bb8692dd238edf5783662b9dcbdc30 502 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 138 150 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 IX88_16510 f1bb8692dd238edf5783662b9dcbdc30 502 PIRSF PIRSF000538 6 502 2.6E-181 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 IX88_16510 f1bb8692dd238edf5783662b9dcbdc30 502 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 365 385 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 IX88_16510 f1bb8692dd238edf5783662b9dcbdc30 502 Gene3D G3DSA:3.30.420.40 5 256 1.0E-111 T 11-10-2018 IX88_16510 f1bb8692dd238edf5783662b9dcbdc30 502 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 7 499 1.2E-228 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 IX88_16510 f1bb8692dd238edf5783662b9dcbdc30 502 SUPERFAMILY SSF53067 7 258 1.55E-97 T 11-10-2018 IX88_16510 f1bb8692dd238edf5783662b9dcbdc30 502 Gene3D G3DSA:3.30.420.40 257 502 1.7E-93 T 11-10-2018 IX88_16510 f1bb8692dd238edf5783662b9dcbdc30 502 Hamap MF_00186 Glycerol kinase [glpK]. 6 500 59.414 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 IX88_09290 73098311b8c5c85d5b43ff6e9c0e4e29 476 Gene3D G3DSA:3.40.640.10 126 367 4.6E-141 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_09290 73098311b8c5c85d5b43ff6e9c0e4e29 476 SUPERFAMILY SSF53383 71 472 3.4E-98 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_09290 73098311b8c5c85d5b43ff6e9c0e4e29 476 Gene3D G3DSA:3.90.1150.10 94 471 4.6E-141 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_09290 73098311b8c5c85d5b43ff6e9c0e4e29 476 Pfam PF00155 Aminotransferase class I and II 107 468 7.5E-50 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 IX88_13135 d0752b02d6cc1e1bb2646af41ee81ceb 147 SUPERFAMILY SSF55729 1 140 1.8E-34 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_13135 d0752b02d6cc1e1bb2646af41ee81ceb 147 Gene3D G3DSA:3.40.630.30 2 139 2.9E-36 T 11-10-2018 IX88_13135 d0752b02d6cc1e1bb2646af41ee81ceb 147 Pfam PF00583 Acetyltransferase (GNAT) family 32 133 3.2E-17 T 11-10-2018 IPR000182 GNAT domain IX88_13135 d0752b02d6cc1e1bb2646af41ee81ceb 147 PIRSF PIRSF037663 1 143 2.2E-11 T 11-10-2018 IPR017255 Acetyltransferase, GNAT, predicted IX88_14055 187d57b633aa6c8255c4437908045ee6 418 Pfam PF11651 P22 coat protein - gene protein 5 1 415 2.3E-95 T 11-10-2018 IPR024659 Major capsid protein Gp5 IX88_14055 187d57b633aa6c8255c4437908045ee6 418 Gene3D G3DSA:2.40.30.240 209 337 1.8E-42 T 11-10-2018 IX88_14055 187d57b633aa6c8255c4437908045ee6 418 ProDom PD140702 CAPSID COAT GP5 DIRECT LATE STRUCTURAL SEQUENCING 12 418 1.0E-33 T 11-10-2018 IX88_11130 fb339e04877106ed5af3432bd9d0975c 164 SUPERFAMILY SSF51182 56 161 1.66E-25 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_11130 fb339e04877106ed5af3432bd9d0975c 164 Gene3D G3DSA:2.60.120.10 30 161 6.8E-45 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_11130 fb339e04877106ed5af3432bd9d0975c 164 Pfam PF07883 Cupin domain 71 134 3.5E-11 T 11-10-2018 IPR013096 Cupin 2, conserved barrel IX88_15980 b736a253f30067ff011c35987ec0cd15 232 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 9 227 39.011 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 IX88_15980 b736a253f30067ff011c35987ec0cd15 232 TIGRFAM TIGR02796 tolQ: protein TolQ 11 222 3.3E-83 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 IX88_15980 b736a253f30067ff011c35987ec0cd15 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 2.2E-38 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel IX88_01660 7174ef9ff9212010b7618c2128ab6cdf 179 SUPERFAMILY SSF48452 3 175 3.11E-67 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_01660 7174ef9ff9212010b7618c2128ab6cdf 179 Gene3D G3DSA:1.25.40.10 79 179 2.6E-32 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_01660 7174ef9ff9212010b7618c2128ab6cdf 179 Gene3D G3DSA:1.20.58.320 1 78 2.0E-27 T 11-10-2018 IX88_01660 7174ef9ff9212010b7618c2128ab6cdf 179 Pfam PF06041 Bacterial protein of unknown function (DUF924) 6 175 1.2E-63 T 11-10-2018 IPR010323 Protein of unknown function DUF924 IX88_05320 217af97f8c14dbb735b97231485e89fa 299 Pfam PF04333 MlaA lipoprotein 76 266 1.4E-62 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 IX88_05320 217af97f8c14dbb735b97231485e89fa 299 PRINTS PR01805 VacJ lipoprotein signature 180 197 2.3E-18 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 IX88_05320 217af97f8c14dbb735b97231485e89fa 299 PRINTS PR01805 VacJ lipoprotein signature 94 110 2.3E-18 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 IX88_05320 217af97f8c14dbb735b97231485e89fa 299 PRINTS PR01805 VacJ lipoprotein signature 77 90 2.3E-18 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 IX88_05320 217af97f8c14dbb735b97231485e89fa 299 PRINTS PR01805 VacJ lipoprotein signature 145 162 2.3E-18 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 IX88_12365 7909426aa2c2f79a9300688545121550 221 Pfam PF06805 Bacteriophage lambda tail assembly protein I 3 61 1.6E-5 T 11-10-2018 IPR010654 Bacteriophage lambda tail assembly I IX88_08620 7a0387fc11c43f4e7e4e36cd66e8f719 190 SUPERFAMILY SSF81342 7 184 6.28E-37 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 IX88_08620 7a0387fc11c43f4e7e4e36cd66e8f719 190 Pfam PF01292 Prokaryotic cytochrome b561 13 179 6.6E-27 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 IX88_17050 dfebbf038eab35885d6536df9cf5bdef 461 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 4 448 3.4E-156 T 11-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 IX88_17050 dfebbf038eab35885d6536df9cf5bdef 461 Pfam PF06974 Protein of unknown function (DUF1298) 302 445 1.9E-41 T 11-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 IX88_17050 dfebbf038eab35885d6536df9cf5bdef 461 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 4 263 8.1E-68 T 11-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 IX88_08955 8b1e53cc73c86b9a50731fd75a9e4d45 221 Gene3D G3DSA:1.10.3720.10 1 221 2.5E-44 T 11-10-2018 IPR035906 MetI-like superfamily IX88_08955 8b1e53cc73c86b9a50731fd75a9e4d45 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 218 1.6E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_08955 8b1e53cc73c86b9a50731fd75a9e4d45 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 1.5E-16 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 IX88_08955 8b1e53cc73c86b9a50731fd75a9e4d45 221 SUPERFAMILY SSF161098 14 209 1.31E-36 T 11-10-2018 IPR035906 MetI-like superfamily IX88_01615 52f3f870dbbd252ce26ad836975f598e 241 Gene3D G3DSA:2.30.30.40 24 88 5.6E-8 T 11-10-2018 IX88_07845 760356ddb8f72c9e92f2a67099d2c84d 556 Pfam PF00732 GMC oxidoreductase 8 284 3.9E-9 T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 IX88_07845 760356ddb8f72c9e92f2a67099d2c84d 556 SUPERFAMILY SSF51905 4 534 4.36E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07845 760356ddb8f72c9e92f2a67099d2c84d 556 Gene3D G3DSA:3.50.50.60 177 331 5.1E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07845 760356ddb8f72c9e92f2a67099d2c84d 556 Gene3D G3DSA:3.50.50.60 441 534 6.4E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07845 760356ddb8f72c9e92f2a67099d2c84d 556 Pfam PF05199 GMC oxidoreductase 469 526 3.4E-17 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 IX88_07845 760356ddb8f72c9e92f2a67099d2c84d 556 Gene3D G3DSA:3.50.50.60 6 176 2.5E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_02330 a67622fd487696c5f75f19a1a80f3349 305 Gene3D G3DSA:3.40.390.10 128 305 1.8E-19 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 IX88_02330 a67622fd487696c5f75f19a1a80f3349 305 PRINTS PR00138 Matrixin signature 251 276 3.6E-11 T 11-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 IX88_02330 a67622fd487696c5f75f19a1a80f3349 305 PRINTS PR00138 Matrixin signature 58 73 3.6E-11 T 11-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 IX88_02330 a67622fd487696c5f75f19a1a80f3349 305 PRINTS PR00138 Matrixin signature 286 299 3.6E-11 T 11-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 IX88_02330 a67622fd487696c5f75f19a1a80f3349 305 Pfam PF00413 Matrixin 79 299 4.7E-14 T 11-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 IX88_02330 a67622fd487696c5f75f19a1a80f3349 305 SMART SM00235 168 300 8.6E-5 T 11-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 IX88_02330 a67622fd487696c5f75f19a1a80f3349 305 SUPERFAMILY SSF55486 231 302 1.96E-17 T 11-10-2018 IX88_06055 86851184bfd73ac68461b755ab32da4d 205 Pfam PF01300 Telomere recombination 22 197 6.1E-43 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 IX88_06055 86851184bfd73ac68461b755ab32da4d 205 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 6 200 1.2E-59 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 IX88_06055 86851184bfd73ac68461b755ab32da4d 205 SUPERFAMILY SSF55821 3 203 3.66E-59 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily IX88_06055 86851184bfd73ac68461b755ab32da4d 205 Gene3D G3DSA:3.90.870.10 2 205 2.3E-60 T 11-10-2018 IX88_16140 b1fd0c75c74b4ef231ca5b1a573a9565 326 Gene3D G3DSA:3.90.550.10 2 225 8.7E-39 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_16140 b1fd0c75c74b4ef231ca5b1a573a9565 326 Pfam PF00535 Glycosyl transferase family 2 8 168 6.8E-30 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 IX88_16140 b1fd0c75c74b4ef231ca5b1a573a9565 326 SUPERFAMILY SSF53448 3 213 2.59E-40 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_11615 4683a3a179413a492371dd9efa89259e 261 SUPERFAMILY SSF53474 9 259 2.44E-58 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_11615 4683a3a179413a492371dd9efa89259e 261 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 18 259 1.1E-83 T 11-10-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 IX88_11615 4683a3a179413a492371dd9efa89259e 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 205 219 3.1E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_11615 4683a3a179413a492371dd9efa89259e 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 3.1E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_11615 4683a3a179413a492371dd9efa89259e 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 3.1E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_11615 4683a3a179413a492371dd9efa89259e 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 3.1E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_11615 4683a3a179413a492371dd9efa89259e 261 Pfam PF00561 alpha/beta hydrolase fold 24 245 4.2E-21 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_11615 4683a3a179413a492371dd9efa89259e 261 Gene3D G3DSA:3.40.50.1820 3 260 1.1E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_17915 392b5b2a07d63b79b52d5b914c680c5b 224 Pfam PF04172 LrgB-like family 11 218 6.9E-51 T 11-10-2018 IPR007300 CidB/LrgB family IX88_16065 082302840136689da53b65be10061514 269 Gene3D G3DSA:3.40.50.1820 2 268 1.8E-43 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_16065 082302840136689da53b65be10061514 269 SUPERFAMILY SSF53474 4 264 1.1E-26 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_16065 082302840136689da53b65be10061514 269 Pfam PF12697 Alpha/beta hydrolase family 50 257 5.7E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_03110 7b8444e7506b5161251848630ef30fb4 189 SUPERFAMILY SSF55821 6 188 1.25E-43 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily IX88_03110 7b8444e7506b5161251848630ef30fb4 189 Pfam PF01300 Telomere recombination 11 187 5.2E-34 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 IX88_03110 7b8444e7506b5161251848630ef30fb4 189 Gene3D G3DSA:3.90.870.10 1 188 9.0E-54 T 11-10-2018 IX88_03110 7b8444e7506b5161251848630ef30fb4 189 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 3 188 35.501 T 11-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 IX88_08830 813f1895bab9fc3e935630bf643e9648 223 Pfam PF13649 Methyltransferase domain 46 141 3.4E-15 T 11-10-2018 IX88_08830 813f1895bab9fc3e935630bf643e9648 223 Gene3D G3DSA:3.40.50.150 5 223 3.1E-40 T 11-10-2018 IX88_08830 813f1895bab9fc3e935630bf643e9648 223 SUPERFAMILY SSF53335 9 221 6.19E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_02630 7dc5319688db0c903ad982501d6268ad 291 Gene3D G3DSA:3.90.550.10 1 290 3.3E-78 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_02630 7dc5319688db0c903ad982501d6268ad 291 Pfam PF00483 Nucleotidyl transferase 5 260 4.7E-22 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 IX88_02630 7dc5319688db0c903ad982501d6268ad 291 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 267 5.7E-103 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 IX88_02630 7dc5319688db0c903ad982501d6268ad 291 SUPERFAMILY SSF53448 3 279 1.28E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_05605 5efce0fb8954acc6d53ee0a9add36c7d 264 Gene3D G3DSA:3.40.190.10 109 222 4.8E-24 T 11-10-2018 IX88_05605 5efce0fb8954acc6d53ee0a9add36c7d 264 Pfam PF13531 Bacterial extracellular solute-binding protein 27 259 1.7E-27 T 11-10-2018 IX88_05605 5efce0fb8954acc6d53ee0a9add36c7d 264 SUPERFAMILY SSF53850 25 259 6.59E-35 T 11-10-2018 IX88_05605 5efce0fb8954acc6d53ee0a9add36c7d 264 Gene3D G3DSA:3.40.190.10 34 258 4.8E-24 T 11-10-2018 IX88_17530 a084694d65b56f47d7a178dc17de8ba9 349 SMART SM00342 256 337 5.3E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_17530 a084694d65b56f47d7a178dc17de8ba9 349 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 47 207 7.2E-23 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal IX88_17530 a084694d65b56f47d7a178dc17de8ba9 349 Gene3D G3DSA:1.10.10.60 232 347 1.6E-17 T 11-10-2018 IX88_17530 a084694d65b56f47d7a178dc17de8ba9 349 Pfam PF12833 Helix-turn-helix domain 263 332 1.2E-13 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_17530 a084694d65b56f47d7a178dc17de8ba9 349 SUPERFAMILY SSF46689 292 340 8.06E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_17985 1ea311cf2cb9f5166e15208f99cb7b80 303 Gene3D G3DSA:3.40.50.720 2 291 5.0E-79 T 11-10-2018 IX88_17985 1ea311cf2cb9f5166e15208f99cb7b80 303 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 254 3.2E-55 T 11-10-2018 IX88_17985 1ea311cf2cb9f5166e15208f99cb7b80 303 SUPERFAMILY SSF51735 14 255 9.94E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_17985 1ea311cf2cb9f5166e15208f99cb7b80 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 4.3E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_17985 1ea311cf2cb9f5166e15208f99cb7b80 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 4.3E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_17985 1ea311cf2cb9f5166e15208f99cb7b80 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 4.3E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_17985 1ea311cf2cb9f5166e15208f99cb7b80 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 4.3E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_17985 1ea311cf2cb9f5166e15208f99cb7b80 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 4.3E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_17985 1ea311cf2cb9f5166e15208f99cb7b80 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 4.3E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11420 afca49abff2d0cf4ac2dc4e34e452dd3 217 SMART SM00882 9 206 1.3E-63 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 IX88_11420 afca49abff2d0cf4ac2dc4e34e452dd3 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 212 5.6E-89 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 IX88_11420 afca49abff2d0cf4ac2dc4e34e452dd3 217 SUPERFAMILY SSF100950 8 212 9.27E-63 T 11-10-2018 IPR037171 NagB/RpiA transferase-like IX88_11420 afca49abff2d0cf4ac2dc4e34e452dd3 217 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 47 55 - T 11-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 IX88_11420 afca49abff2d0cf4ac2dc4e34e452dd3 217 Gene3D G3DSA:3.40.1080.10 4 215 1.2E-84 T 11-10-2018 IX88_11420 afca49abff2d0cf4ac2dc4e34e452dd3 217 Pfam PF01144 Coenzyme A transferase 9 199 5.3E-37 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 IX88_13535 76de00e155587719c36453bbe3d0402f 150 Pfam PF13673 Acetyltransferase (GNAT) domain 49 139 5.9E-9 T 11-10-2018 IPR000182 GNAT domain IX88_13535 76de00e155587719c36453bbe3d0402f 150 Gene3D G3DSA:3.40.630.30 6 143 2.9E-14 T 11-10-2018 IX88_13535 76de00e155587719c36453bbe3d0402f 150 SUPERFAMILY SSF55729 3 136 4.63E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_07425 90b2293f9e9f35f8d2fed18b77412f68 402 Pfam PF00872 Transposase, Mutator family 18 377 1.0E-115 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 IX88_07425 90b2293f9e9f35f8d2fed18b77412f68 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 IX88_16340 0176fd6ab9d618755b1d15c476c6d54a 214 Pfam PF05656 Protein of unknown function (DUF805) 118 212 6.5E-30 T 11-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 IX88_17695 c1c7958e9f2f76d6679e47622b86c40e 295 SUPERFAMILY SSF53756 1 239 1.88E-5 T 11-10-2018 IX88_17695 c1c7958e9f2f76d6679e47622b86c40e 295 Pfam PF06258 Mitochondrial fission ELM1 11 292 6.7E-56 T 11-10-2018 IPR009367 Mitochondrial fission protein ELM1-like IX88_17365 81135b014f4d674a4eef82b8d0927925 452 Pfam PF00860 Permease family 26 416 2.4E-99 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 IX88_17365 81135b014f4d674a4eef82b8d0927925 452 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 22 446 6.1E-123 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 IX88_17365 81135b014f4d674a4eef82b8d0927925 452 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 364 384 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 IX88_17365 81135b014f4d674a4eef82b8d0927925 452 TIGRFAM TIGR03173 pbuX: xanthine permease 29 448 2.7E-127 T 11-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 IX88_13580 27d3f1883edd67bf4046f2024df3ba0e 348 Pfam PF02353 Mycolic acid cyclopropane synthetase 67 330 5.4E-44 T 11-10-2018 IX88_13580 27d3f1883edd67bf4046f2024df3ba0e 348 SUPERFAMILY SSF53335 70 339 2.28E-59 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_13580 27d3f1883edd67bf4046f2024df3ba0e 348 Gene3D G3DSA:3.40.50.150 56 341 5.3E-74 T 11-10-2018 IX88_04950 e5f4c63d94d8c8064822a849eb019994 287 SUPERFAMILY SSF48613 33 273 5.11E-8 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IX88_04950 e5f4c63d94d8c8064822a849eb019994 287 SMART SM01236 111 223 9.0E-12 T 11-10-2018 IX88_04950 e5f4c63d94d8c8064822a849eb019994 287 Gene3D G3DSA:1.20.910.10 29 279 1.4E-24 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IX88_03440 b80083b4cac6cd6c9216479f3471a1a1 99 Pfam PF04023 FeoA domain 13 92 3.7E-16 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 IX88_03440 b80083b4cac6cd6c9216479f3471a1a1 99 SMART SM00899 13 93 1.4E-17 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 IX88_03440 b80083b4cac6cd6c9216479f3471a1a1 99 SUPERFAMILY SSF50037 17 93 1.14E-14 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal IX88_03440 b80083b4cac6cd6c9216479f3471a1a1 99 Gene3D G3DSA:2.30.30.90 12 96 3.3E-24 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain IX88_00950 6235598637c1ac851820187cfdb9842b 205 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 203 35.41 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 IX88_00950 6235598637c1ac851820187cfdb9842b 205 SUPERFAMILY SSF52317 2 203 2.92E-59 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_00950 6235598637c1ac851820187cfdb9842b 205 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 203 3.6E-71 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 IX88_00950 6235598637c1ac851820187cfdb9842b 205 Pfam PF00117 Glutamine amidotransferase class-I 6 200 6.9E-22 T 11-10-2018 IPR017926 Glutamine amidotransferase IX88_00950 6235598637c1ac851820187cfdb9842b 205 Gene3D G3DSA:3.40.50.880 1 204 2.6E-78 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_00950 6235598637c1ac851820187cfdb9842b 205 PIRSF PIRSF000495 2 205 5.8E-72 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 IX88_15380 a8e9d1649de4e7b872eceb845b6f360b 181 Gene3D G3DSA:2.160.10.10 4 181 2.8E-56 T 11-10-2018 IX88_15380 a8e9d1649de4e7b872eceb845b6f360b 181 SUPERFAMILY SSF51161 5 177 2.22E-45 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily IX88_15380 a8e9d1649de4e7b872eceb845b6f360b 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 1.2E-8 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_15380 a8e9d1649de4e7b872eceb845b6f360b 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 47 3.1E-5 T 11-10-2018 IPR001451 Hexapeptide repeat IX88_10300 2590cd9e62d4336ad39dde9ea9f02898 289 Pfam PF10977 Protein of unknown function (DUF2797) 47 285 1.1E-90 T 11-10-2018 IPR021246 Protein of unknown function DUF2797 IX88_04205 f5f6e70a5ac3b9665f2ff5aebb0d070a 214 Gene3D G3DSA:3.60.15.10 2 211 1.1E-75 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_04205 f5f6e70a5ac3b9665f2ff5aebb0d070a 214 SMART SM00849 13 193 2.2E-41 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_04205 f5f6e70a5ac3b9665f2ff5aebb0d070a 214 Pfam PF00753 Metallo-beta-lactamase superfamily 11 193 1.6E-29 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_04205 f5f6e70a5ac3b9665f2ff5aebb0d070a 214 SUPERFAMILY SSF56281 3 209 3.41E-56 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_05195 04fec760a4069e6088f21fcd86cd984a 185 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 23 182 1.1E-53 T 11-10-2018 IPR012816 NADAR IX88_05195 04fec760a4069e6088f21fcd86cd984a 185 Pfam PF08719 Domain of unknown function (DUF1768) 24 182 8.2E-54 T 11-10-2018 IPR012816 NADAR IX88_05195 04fec760a4069e6088f21fcd86cd984a 185 Gene3D G3DSA:1.10.357.40 11 185 2.2E-43 T 11-10-2018 IPR037238 YbiA-like superfamily IX88_05195 04fec760a4069e6088f21fcd86cd984a 185 SUPERFAMILY SSF143990 14 184 6.28E-54 T 11-10-2018 IPR037238 YbiA-like superfamily IX88_00175 d6d650684e2301a70a126bbac69403fa 242 Gene3D G3DSA:3.40.50.880 5 241 5.3E-52 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_00175 d6d650684e2301a70a126bbac69403fa 242 SUPERFAMILY SSF52317 30 216 6.45E-40 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_00175 d6d650684e2301a70a126bbac69403fa 242 Pfam PF00117 Glutamine amidotransferase class-I 48 193 4.5E-16 T 11-10-2018 IPR017926 Glutamine amidotransferase IX88_09790 7902929b6a7271f0741e82913403f4d4 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 134 2.0E-24 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 IX88_09790 7902929b6a7271f0741e82913403f4d4 142 Gene3D G3DSA:3.30.420.270 60 131 4.4E-7 T 11-10-2018 IX88_03050 828a4d48f89a6cb04738c463c0337430 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 3.5E-35 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 IX88_03050 828a4d48f89a6cb04738c463c0337430 156 SUPERFAMILY SSF81573 62 121 5.1E-12 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily IX88_03050 828a4d48f89a6cb04738c463c0337430 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.2 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 IX88_03050 828a4d48f89a6cb04738c463c0337430 156 Gene3D G3DSA:1.20.5.620 62 122 3.1E-13 T 11-10-2018 IX88_03050 828a4d48f89a6cb04738c463c0337430 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.3E-45 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 IX88_10770 3a72aae3c0b852ff2e84b17d79169846 94 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 12 92 2.1E-36 T 11-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 IX88_10770 3a72aae3c0b852ff2e84b17d79169846 94 Gene3D G3DSA:1.10.10.1150 3 93 1.1E-21 T 11-10-2018 IX88_10770 3a72aae3c0b852ff2e84b17d79169846 94 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 29 91 9.1E-14 T 11-10-2018 IPR008792 Coenzyme PQQ synthesis D IX88_10770 3a72aae3c0b852ff2e84b17d79169846 94 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 6 93 23.771 T 11-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 IX88_04260 f3832af5559a461cde978c8df53c63fb 448 PIRSF PIRSF006603 8 447 1.3E-61 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 IX88_04260 f3832af5559a461cde978c8df53c63fb 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 420 6.4E-87 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 IX88_04260 f3832af5559a461cde978c8df53c63fb 448 Pfam PF01554 MatE 246 405 5.5E-27 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 IX88_04260 f3832af5559a461cde978c8df53c63fb 448 Pfam PF01554 MatE 20 179 2.1E-28 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 IX88_04935 7c39324e56deea35bafc253b85a71c62 123 SMART SM00052 1 113 6.9E-8 T 11-10-2018 IPR001633 EAL domain IX88_04935 7c39324e56deea35bafc253b85a71c62 123 Pfam PF00563 EAL domain 8 108 3.0E-35 T 11-10-2018 IPR001633 EAL domain IX88_04935 7c39324e56deea35bafc253b85a71c62 123 Gene3D G3DSA:3.20.20.450 1 120 1.2E-46 T 11-10-2018 IPR035919 EAL domain superfamily IX88_04935 7c39324e56deea35bafc253b85a71c62 123 SUPERFAMILY SSF141868 1 116 2.48E-42 T 11-10-2018 IPR035919 EAL domain superfamily IX88_15135 1aa10aed00e7990c62dc46af8fe83791 630 Pfam PF13387 Domain of unknown function (DUF4105) 125 294 1.8E-55 T 11-10-2018 IPR025178 Domain of unknown function DUF4105 IX88_13335 3af02642a19fb7d66c653b9eedf5dfaf 334 SUPERFAMILY SSF51679 8 328 3.14E-88 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 IX88_13335 3af02642a19fb7d66c653b9eedf5dfaf 334 Gene3D G3DSA:3.20.20.30 4 332 8.2E-98 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 IX88_13335 3af02642a19fb7d66c653b9eedf5dfaf 334 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 329 1.6E-128 T 11-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 IX88_13335 3af02642a19fb7d66c653b9eedf5dfaf 334 Pfam PF00296 Luciferase-like monooxygenase 23 295 3.7E-42 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 IX88_16865 72a2bce94b45fb58f41cea5511bf7256 144 Gene3D G3DSA:3.30.110.70 47 144 1.8E-26 T 11-10-2018 IX88_16865 72a2bce94b45fb58f41cea5511bf7256 144 SUPERFAMILY SSF117782 57 143 3.53E-26 T 11-10-2018 IPR035439 UPF0145 domain superfamily IX88_16865 72a2bce94b45fb58f41cea5511bf7256 144 Pfam PF01906 Putative heavy-metal-binding 58 143 1.1E-25 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 IX88_03465 b2c2796e76d5d8451fed333422535406 310 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 29 256 2.3E-47 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 IX88_03465 b2c2796e76d5d8451fed333422535406 310 Gene3D G3DSA:3.40.50.620 101 237 1.9E-100 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_03465 b2c2796e76d5d8451fed333422535406 310 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 26 278 6.0E-106 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 IX88_03465 b2c2796e76d5d8451fed333422535406 310 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 26 306 39.576 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 IX88_03465 b2c2796e76d5d8451fed333422535406 310 PRINTS PR00987 Glutamyl-tRNA synthetase signature 205 213 4.7E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IX88_03465 b2c2796e76d5d8451fed333422535406 310 PRINTS PR00987 Glutamyl-tRNA synthetase signature 189 199 4.7E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IX88_03465 b2c2796e76d5d8451fed333422535406 310 PRINTS PR00987 Glutamyl-tRNA synthetase signature 58 71 4.7E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IX88_03465 b2c2796e76d5d8451fed333422535406 310 PRINTS PR00987 Glutamyl-tRNA synthetase signature 29 41 4.7E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 IX88_03465 b2c2796e76d5d8451fed333422535406 310 SUPERFAMILY SSF52374 26 300 1.69E-80 T 11-10-2018 IX88_03465 b2c2796e76d5d8451fed333422535406 310 Gene3D G3DSA:3.40.50.620 26 300 1.9E-100 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IX88_11470 e0fda14afbdd538eecef8dbeeba8e483 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_11470 e0fda14afbdd538eecef8dbeeba8e483 245 Gene3D G3DSA:3.40.50.720 1 244 5.1E-67 T 11-10-2018 IX88_11470 e0fda14afbdd538eecef8dbeeba8e483 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 7.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11470 e0fda14afbdd538eecef8dbeeba8e483 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 7.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11470 e0fda14afbdd538eecef8dbeeba8e483 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 7.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11470 e0fda14afbdd538eecef8dbeeba8e483 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 7.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11470 e0fda14afbdd538eecef8dbeeba8e483 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11470 e0fda14afbdd538eecef8dbeeba8e483 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 7.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11470 e0fda14afbdd538eecef8dbeeba8e483 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11470 e0fda14afbdd538eecef8dbeeba8e483 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11470 e0fda14afbdd538eecef8dbeeba8e483 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_11470 e0fda14afbdd538eecef8dbeeba8e483 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 5.0E-54 T 11-10-2018 IX88_11470 e0fda14afbdd538eecef8dbeeba8e483 245 SUPERFAMILY SSF51735 3 244 5.61E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_07930 e77e4f2efc4da99de1400d8f49fd8f36 185 Pfam PF01292 Prokaryotic cytochrome b561 9 181 1.7E-26 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 IX88_07930 e77e4f2efc4da99de1400d8f49fd8f36 185 SUPERFAMILY SSF81342 4 181 2.04E-33 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 IX88_13070 1880a0065a538e61de1b51ada9c64c3b 240 Gene3D G3DSA:3.40.50.880 3 235 2.0E-54 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_13070 1880a0065a538e61de1b51ada9c64c3b 240 Pfam PF00117 Glutamine amidotransferase class-I 25 190 2.2E-19 T 11-10-2018 IPR017926 Glutamine amidotransferase IX88_13070 1880a0065a538e61de1b51ada9c64c3b 240 SUPERFAMILY SSF52317 46 236 2.07E-45 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like IX88_10155 b0f12386ba2245c7d865933129cfa8a0 613 Pfam PF06276 Ferric iron reductase FhuF-like transporter 425 594 1.0E-34 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain IX88_10155 b0f12386ba2245c7d865933129cfa8a0 613 Gene3D G3DSA:1.10.510.40 394 613 1.2E-69 T 11-10-2018 IX88_10155 b0f12386ba2245c7d865933129cfa8a0 613 Pfam PF04183 IucA / IucC family 158 403 8.0E-74 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 IX88_11810 c200e1cedf061435003d53a99b76adec 381 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 381 3.5E-150 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 IX88_11810 c200e1cedf061435003d53a99b76adec 381 PIRSF PIRSF000267 2 380 1.7E-120 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 IX88_11810 c200e1cedf061435003d53a99b76adec 381 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 364 3.2E-105 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 IX88_05165 82d98dd37894bc8fa3f524a30e298287 112 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 111 8.0E-40 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 IX88_05165 82d98dd37894bc8fa3f524a30e298287 112 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 24 109 3.9E-37 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 IX88_05165 82d98dd37894bc8fa3f524a30e298287 112 SUPERFAMILY SSF55200 24 112 6.54E-33 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 IX88_05165 82d98dd37894bc8fa3f524a30e298287 112 Gene3D G3DSA:3.30.110.10 14 112 1.3E-37 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 IX88_11660 4b717fe0a62f27664b0cdb06a676ac81 285 Gene3D G3DSA:3.20.20.70 3 285 8.2E-96 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_11660 4b717fe0a62f27664b0cdb06a676ac81 285 Pfam PF00793 DAHP synthetase I family 14 276 1.0E-71 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 IX88_11660 4b717fe0a62f27664b0cdb06a676ac81 285 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 17 279 48.426 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 IX88_11660 4b717fe0a62f27664b0cdb06a676ac81 285 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 22 277 1.1E-113 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 IX88_11660 4b717fe0a62f27664b0cdb06a676ac81 285 SUPERFAMILY SSF51569 8 281 1.19E-100 T 11-10-2018 IX88_01430 ffa0e29d493ea1081e9c5d7ac9b2f314 146 Pfam PF05258 Protein of unknown function (DUF721) 26 95 2.6E-4 T 11-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 IX88_00250 7f2df252122cd23a83da734106421e96 193 Gene3D G3DSA:3.40.50.450 1 192 1.1E-73 T 11-10-2018 IX88_00250 7f2df252122cd23a83da734106421e96 193 Pfam PF03641 Possible lysine decarboxylase 46 175 2.2E-39 T 11-10-2018 IPR031100 LOG family IX88_00250 7f2df252122cd23a83da734106421e96 193 SUPERFAMILY SSF102405 1 179 2.59E-60 T 11-10-2018 IX88_00250 7f2df252122cd23a83da734106421e96 193 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 3 179 2.7E-60 T 11-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG IX88_01230 b8f06714619a08c7d19acea8aa889493 224 Gene3D G3DSA:1.20.910.10 1 221 5.4E-66 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IX88_01230 b8f06714619a08c7d19acea8aa889493 224 Pfam PF03070 TENA/THI-4/PQQC family 16 214 7.5E-37 T 11-10-2018 IPR004305 Thiaminase-2/PQQC IX88_01230 b8f06714619a08c7d19acea8aa889493 224 SUPERFAMILY SSF48613 1 213 1.42E-67 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IX88_01230 b8f06714619a08c7d19acea8aa889493 224 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 15 214 4.2E-47 T 11-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 IX88_10320 cd300fab5e3585d99f3225d173db3b37 137 SUPERFAMILY SSF54197 1 137 1.55E-39 T 11-10-2018 IPR036265 HIT-like superfamily IX88_10320 cd300fab5e3585d99f3225d173db3b37 137 Pfam PF01230 HIT domain 15 109 2.0E-26 T 11-10-2018 IPR001310 Histidine triad (HIT) protein IX88_10320 cd300fab5e3585d99f3225d173db3b37 137 PRINTS PR00332 Histidine triad family signature 29 47 7.0E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein IX88_10320 cd300fab5e3585d99f3225d173db3b37 137 PRINTS PR00332 Histidine triad family signature 96 106 7.0E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein IX88_10320 cd300fab5e3585d99f3225d173db3b37 137 PRINTS PR00332 Histidine triad family signature 8 24 7.0E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein IX88_10320 cd300fab5e3585d99f3225d173db3b37 137 Gene3D G3DSA:3.30.428.10 1 137 9.6E-38 T 11-10-2018 IPR036265 HIT-like superfamily IX88_07875 1eaf3fbdc2060bc99e8f737be8f97fb9 507 Gene3D G3DSA:3.50.50.60 328 507 2.9E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07875 1eaf3fbdc2060bc99e8f737be8f97fb9 507 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 26 222 1.4E-15 T 11-10-2018 IX88_07875 1eaf3fbdc2060bc99e8f737be8f97fb9 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 23 45 5.9E-7 T 11-10-2018 IX88_07875 1eaf3fbdc2060bc99e8f737be8f97fb9 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 188 213 5.9E-7 T 11-10-2018 IX88_07875 1eaf3fbdc2060bc99e8f737be8f97fb9 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 5.9E-7 T 11-10-2018 IX88_07875 1eaf3fbdc2060bc99e8f737be8f97fb9 507 Gene3D G3DSA:3.50.50.60 6 180 7.0E-50 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_07875 1eaf3fbdc2060bc99e8f737be8f97fb9 507 SUPERFAMILY SSF51905 22 403 3.97E-47 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_11390 9f05f08b3f64b950d3cc7897293e2fc7 264 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 7 264 1.9E-39 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 IX88_11390 9f05f08b3f64b950d3cc7897293e2fc7 264 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 27 264 2.0E-39 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 IX88_14895 8ffcf01ed0ba2337254293e11bbb8639 270 Pfam PF04233 Phage Mu protein F like protein 157 260 3.2E-21 T 11-10-2018 IPR006528 Phage head morphogenesis domain IX88_14895 8ffcf01ed0ba2337254293e11bbb8639 270 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 160 262 1.9E-22 T 11-10-2018 IPR006528 Phage head morphogenesis domain IX88_04775 de9176a5a095c329cc99bc886ca5883b 428 Pfam PF00534 Glycosyl transferases group 1 235 391 4.3E-33 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 IX88_04775 de9176a5a095c329cc99bc886ca5883b 428 Gene3D G3DSA:3.40.50.2000 224 402 2.0E-61 T 11-10-2018 IX88_04775 de9176a5a095c329cc99bc886ca5883b 428 SUPERFAMILY SSF53756 47 417 6.28E-69 T 11-10-2018 IX88_04775 de9176a5a095c329cc99bc886ca5883b 428 Pfam PF13439 Glycosyltransferase Family 4 59 227 4.0E-20 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 IX88_04775 de9176a5a095c329cc99bc886ca5883b 428 Gene3D G3DSA:3.40.50.2000 50 223 2.0E-61 T 11-10-2018 IX88_15145 5dbf5b1e00ed8ce2a42e1463b96636c1 264 Pfam PF05675 Protein of unknown function (DUF817) 9 245 4.1E-81 T 11-10-2018 IPR008535 Protein of unknown function DUF817 IX88_15145 5dbf5b1e00ed8ce2a42e1463b96636c1 264 PIRSF PIRSF009141 2 260 6.4E-73 T 11-10-2018 IPR008535 Protein of unknown function DUF817 IX88_13065 de731604ef33364555976e87f3aaebeb 271 Gene3D G3DSA:1.10.30.40 1 61 7.7E-13 T 11-10-2018 IX88_13065 de731604ef33364555976e87f3aaebeb 271 PIRSF PIRSF018982 1 264 3.7E-91 T 11-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 IX88_13065 de731604ef33364555976e87f3aaebeb 271 Gene3D G3DSA:3.40.50.11240 69 252 2.4E-60 T 11-10-2018 IX88_13065 de731604ef33364555976e87f3aaebeb 271 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 15 253 2.8E-88 T 11-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 IX88_11160 1495d3c1b15537a0dd7edfad20b5dac7 391 Gene3D G3DSA:3.90.850.10 148 371 4.3E-44 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 IX88_11160 1495d3c1b15537a0dd7edfad20b5dac7 391 SUPERFAMILY SSF56529 162 372 1.44E-26 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 IX88_11160 1495d3c1b15537a0dd7edfad20b5dac7 391 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 217 365 4.6E-8 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 IX88_05380 8f1b8cbf900ca52dcf5a648379b34612 361 Gene3D G3DSA:3.90.1150.10 26 350 1.3E-110 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_05380 8f1b8cbf900ca52dcf5a648379b34612 361 SUPERFAMILY SSF53383 27 357 5.18E-76 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_05380 8f1b8cbf900ca52dcf5a648379b34612 361 Pfam PF00155 Aminotransferase class I and II 31 355 1.5E-58 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 IX88_05380 8f1b8cbf900ca52dcf5a648379b34612 361 Gene3D G3DSA:3.40.640.10 44 268 1.3E-110 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_05380 8f1b8cbf900ca52dcf5a648379b34612 361 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 13 358 7.3E-96 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 IX88_05380 8f1b8cbf900ca52dcf5a648379b34612 361 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 10 361 58.237 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 IX88_00650 123522def11afa079a7e54a3b0668087 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 5.5E-63 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_00650 123522def11afa079a7e54a3b0668087 154 SUPERFAMILY SSF47240 1 154 1.07E-45 T 11-10-2018 IPR009078 Ferritin-like superfamily IX88_00650 123522def11afa079a7e54a3b0668087 154 PIRSF PIRSF002560 1 154 1.3E-62 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_00650 123522def11afa079a7e54a3b0668087 154 Pfam PF00210 Ferritin-like domain 8 141 8.4E-34 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 IX88_00650 123522def11afa079a7e54a3b0668087 154 Gene3D G3DSA:1.20.1260.10 1 154 5.6E-59 T 11-10-2018 IPR012347 Ferritin-like IX88_00650 123522def11afa079a7e54a3b0668087 154 PRINTS PR00601 Bacterioferritin signature 128 149 1.6E-57 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_00650 123522def11afa079a7e54a3b0668087 154 PRINTS PR00601 Bacterioferritin signature 23 43 1.6E-57 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_00650 123522def11afa079a7e54a3b0668087 154 PRINTS PR00601 Bacterioferritin signature 3 22 1.6E-57 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_00650 123522def11afa079a7e54a3b0668087 154 PRINTS PR00601 Bacterioferritin signature 107 127 1.6E-57 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_00650 123522def11afa079a7e54a3b0668087 154 PRINTS PR00601 Bacterioferritin signature 44 64 1.6E-57 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_00650 123522def11afa079a7e54a3b0668087 154 PRINTS PR00601 Bacterioferritin signature 65 85 1.6E-57 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_00650 123522def11afa079a7e54a3b0668087 154 PRINTS PR00601 Bacterioferritin signature 86 106 1.6E-57 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_00650 123522def11afa079a7e54a3b0668087 154 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 IX88_11745 b7898b3e7c67ad2e21f8b6ce356f1d7a 226 Gene3D G3DSA:3.30.2010.10 125 214 1.3E-16 T 11-10-2018 IX88_11745 b7898b3e7c67ad2e21f8b6ce356f1d7a 226 Pfam PF01863 Protein of unknown function DUF45 17 214 1.1E-47 T 11-10-2018 IPR002725 Protein of unknown function DUF45 IX88_10650 3cadcd86a122bbaa70680807132658ff 473 Pfam PF02447 GntP family permease 65 466 1.4E-4 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 IX88_15845 5af44b2e7f2a1999e842f3507f5f4434 356 Pfam PF02618 YceG-like family 62 347 2.2E-77 T 11-10-2018 IPR003770 Endolytic murein transglycosylase IX88_15845 5af44b2e7f2a1999e842f3507f5f4434 356 Gene3D G3DSA:1.10.8.1150 57 130 3.0E-7 T 11-10-2018 IX88_15845 5af44b2e7f2a1999e842f3507f5f4434 356 Gene3D G3DSA:3.30.160.60 321 356 1.2E-15 T 11-10-2018 IX88_15845 5af44b2e7f2a1999e842f3507f5f4434 356 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 34 353 31.903 T 11-10-2018 IPR003770 Endolytic murein transglycosylase IX88_15845 5af44b2e7f2a1999e842f3507f5f4434 356 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 31 355 1.8E-84 T 11-10-2018 IPR003770 Endolytic murein transglycosylase IX88_07285 ec94209b316e593a3868cc23056324d3 133 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 115 19.798 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 IX88_07285 ec94209b316e593a3868cc23056324d3 133 SUPERFAMILY SSF52980 6 105 3.43E-20 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 IX88_07285 ec94209b316e593a3868cc23056324d3 133 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 5 111 9.6E-28 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 IX88_07285 ec94209b316e593a3868cc23056324d3 133 Pfam PF02021 Uncharacterised protein family UPF0102 11 101 3.7E-24 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 IX88_07285 ec94209b316e593a3868cc23056324d3 133 Gene3D G3DSA:3.40.1350.10 10 131 7.6E-30 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 IX88_17570 7bb543d457ef1cd8445d6d0feabc2837 237 Gene3D G3DSA:3.20.20.190 2 228 4.7E-53 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 IX88_17570 7bb543d457ef1cd8445d6d0feabc2837 237 SUPERFAMILY SSF51695 1 236 1.36E-51 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 IX88_17570 7bb543d457ef1cd8445d6d0feabc2837 237 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 231 2.4E-30 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 IX88_09785 94aebfd07f9c57b0949bb4023514f5f0 211 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 186 1.7E-32 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel IX88_13785 3c76fc8e4808cdca93340b03a1eb5a4e 329 SUPERFAMILY SSF56645 43 174 2.82E-8 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 IX88_13785 3c76fc8e4808cdca93340b03a1eb5a4e 329 Gene3D G3DSA:2.40.110.10 99 179 5.3E-8 T 11-10-2018 IX88_02100 d8e43021a40356ca39086bb99166895b 230 SUPERFAMILY SSF103515 19 186 9.15E-5 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily IX88_02100 d8e43021a40356ca39086bb99166895b 230 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 6 230 6.1E-66 T 11-10-2018 IPR026387 Outer membrane protein IX88_10895 49db36a2d7d94a8b80d66190dd870ecb 91 Pfam PF10734 Protein of unknown function (DUF2523) 6 81 1.1E-7 T 11-10-2018 IPR019670 Protein of unkown function DUF2523 IX88_11700 5f60c6d6e777751655a707e9e04b700b 186 Pfam PF03551 Transcriptional regulator PadR-like family 7 79 7.5E-10 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal IX88_11700 5f60c6d6e777751655a707e9e04b700b 186 Pfam PF10400 Virulence activator alpha C-term 91 175 6.8E-19 T 11-10-2018 IPR018309 Transcription regulator PadR, C-terminal IX88_11700 5f60c6d6e777751655a707e9e04b700b 186 Gene3D G3DSA:1.10.10.10 1 88 1.3E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_11700 5f60c6d6e777751655a707e9e04b700b 186 SUPERFAMILY SSF46785 3 176 2.47E-35 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_10110 42f05720dc463587aa1010fa30927940 407 Pfam PF00487 Fatty acid desaturase 131 339 1.9E-27 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 IX88_09185 d08114b482d3ffc53b5231b95471fede 244 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 210 1.4E-13 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 IX88_09185 d08114b482d3ffc53b5231b95471fede 244 Gene3D G3DSA:3.40.50.12500 1 243 2.3E-86 T 11-10-2018 IX88_02075 4d194bc2325da62e16fd6bf891e28d5d 320 Pfam PF00551 Formyl transferase 2 184 2.6E-47 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 IX88_02075 4d194bc2325da62e16fd6bf891e28d5d 320 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 314 35.075 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 IX88_02075 4d194bc2325da62e16fd6bf891e28d5d 320 Pfam PF02911 Formyl transferase, C-terminal domain 211 310 2.6E-22 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 IX88_02075 4d194bc2325da62e16fd6bf891e28d5d 320 Gene3D G3DSA:3.40.50.170 1 213 3.3E-77 T 11-10-2018 IX88_02075 4d194bc2325da62e16fd6bf891e28d5d 320 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 313 3.3E-95 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 IX88_02075 4d194bc2325da62e16fd6bf891e28d5d 320 Gene3D G3DSA:3.10.25.10 214 318 6.7E-27 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 IX88_02075 4d194bc2325da62e16fd6bf891e28d5d 320 SUPERFAMILY SSF50486 214 319 1.48E-26 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 IX88_02075 4d194bc2325da62e16fd6bf891e28d5d 320 SUPERFAMILY SSF53328 1 188 1.06E-61 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 IX88_01580 87ab4a909ee865421e5f0d3446b10810 193 Gene3D G3DSA:3.40.50.1820 1 192 5.8E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_01580 87ab4a909ee865421e5f0d3446b10810 193 SUPERFAMILY SSF53474 3 191 7.81E-20 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_01580 87ab4a909ee865421e5f0d3446b10810 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 3 188 2.4E-40 T 11-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA IX88_02450 08ee58d65cf4635a6f9e4003495aaf3e 265 Gene3D G3DSA:1.10.3720.10 56 258 5.9E-28 T 11-10-2018 IPR035906 MetI-like superfamily IX88_02450 08ee58d65cf4635a6f9e4003495aaf3e 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 254 7.6E-29 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_02450 08ee58d65cf4635a6f9e4003495aaf3e 265 SUPERFAMILY SSF161098 63 245 5.63E-35 T 11-10-2018 IPR035906 MetI-like superfamily IX88_08950 a8e619caf37517762f80f884e8fd1660 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 213 1.5E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_08950 a8e619caf37517762f80f884e8fd1660 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 1.6E-31 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 IX88_08950 a8e619caf37517762f80f884e8fd1660 219 Gene3D G3DSA:1.10.3720.10 1 215 1.7E-54 T 11-10-2018 IPR035906 MetI-like superfamily IX88_08950 a8e619caf37517762f80f884e8fd1660 219 SUPERFAMILY SSF161098 11 198 1.2E-43 T 11-10-2018 IPR035906 MetI-like superfamily IX88_17500 8d69533e79e28aada9952e5dc1f9af23 258 Gene3D G3DSA:3.60.15.10 7 258 2.8E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_17500 8d69533e79e28aada9952e5dc1f9af23 258 SUPERFAMILY SSF56281 19 252 2.49E-30 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_17500 8d69533e79e28aada9952e5dc1f9af23 258 Pfam PF00753 Metallo-beta-lactamase superfamily 20 211 1.9E-19 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_17500 8d69533e79e28aada9952e5dc1f9af23 258 SMART SM00849 19 248 4.3E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_02150 21976ca6c407689c4cfb22c30d37a956 111 Pfam PF01521 Iron-sulphur cluster biosynthesis 6 106 1.8E-18 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 IX88_02150 21976ca6c407689c4cfb22c30d37a956 111 Gene3D G3DSA:2.60.300.12 6 111 9.7E-33 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 IX88_02150 21976ca6c407689c4cfb22c30d37a956 111 SUPERFAMILY SSF89360 3 97 2.75E-30 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 IX88_02150 21976ca6c407689c4cfb22c30d37a956 111 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 111 33.22 T 11-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 IX88_02150 21976ca6c407689c4cfb22c30d37a956 111 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 92 109 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 IX88_02150 21976ca6c407689c4cfb22c30d37a956 111 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 7 110 1.8E-37 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 IX88_03555 b0df67b2b0bd36c3d4f99473d9e3735d 146 SUPERFAMILY SSF54637 7 134 3.96E-33 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_03555 b0df67b2b0bd36c3d4f99473d9e3735d 146 Pfam PF13279 Thioesterase-like superfamily 15 131 1.2E-18 T 11-10-2018 IX88_03555 b0df67b2b0bd36c3d4f99473d9e3735d 146 Gene3D G3DSA:3.10.129.10 1 138 1.1E-39 T 11-10-2018 IX88_11930 a26516ed45823630860a13970cda5642 572 SUPERFAMILY SSF52794 116 215 6.1E-35 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 IX88_11930 a26516ed45823630860a13970cda5642 572 Pfam PF02378 Phosphotransferase system, EIIC 243 505 3.5E-19 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 IX88_11930 a26516ed45823630860a13970cda5642 572 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 224 561 2.6E-133 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 IX88_11930 a26516ed45823630860a13970cda5642 572 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 117 200 1.4E-32 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 IX88_11930 a26516ed45823630860a13970cda5642 572 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 118 203 7.4E-17 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 IX88_11930 a26516ed45823630860a13970cda5642 572 Gene3D G3DSA:3.40.50.2300 104 215 1.1E-37 T 11-10-2018 IX88_14620 92b62845c8a4598594b19d228aa8290d 356 SUPERFAMILY SSF56925 125 356 6.54E-17 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IX88_14620 92b62845c8a4598594b19d228aa8290d 356 Pfam PF03922 OmpW family 120 356 1.1E-18 T 11-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 IX88_11375 87fdcb2f877a4128329db5437ce56d18 434 Gene3D G3DSA:1.20.1250.20 2 430 5.6E-77 T 11-10-2018 IX88_11375 87fdcb2f877a4128329db5437ce56d18 434 Pfam PF07690 Major Facilitator Superfamily 20 382 8.2E-46 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_11375 87fdcb2f877a4128329db5437ce56d18 434 SUPERFAMILY SSF103473 9 422 7.59E-84 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_11300 e2e8b5c064d548af34f10f6dfed2e08a 213 SUPERFAMILY SSF52499 11 198 1.83E-46 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 IX88_11300 e2e8b5c064d548af34f10f6dfed2e08a 213 Gene3D G3DSA:3.40.50.850 10 211 1.6E-44 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 IX88_11300 e2e8b5c064d548af34f10f6dfed2e08a 213 Pfam PF00857 Isochorismatase family 20 174 5.0E-24 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 IX88_11690 d61367655a8f92ba0130114d775abc05 135 Pfam PF12680 SnoaL-like domain 12 106 5.2E-8 T 11-10-2018 IPR037401 SnoaL-like domain IX88_11690 d61367655a8f92ba0130114d775abc05 135 Gene3D G3DSA:3.10.450.50 4 133 2.4E-43 T 11-10-2018 IX88_11690 d61367655a8f92ba0130114d775abc05 135 SUPERFAMILY SSF54427 8 114 1.76E-21 T 11-10-2018 IPR032710 NTF2-like domain superfamily IX88_13775 f7b050b0b8b94a012b5d03591ddadaba 199 SUPERFAMILY SSF53335 6 154 3.04E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_13775 f7b050b0b8b94a012b5d03591ddadaba 199 Pfam PF05401 Nodulation protein S (NodS) 15 142 1.4E-17 T 11-10-2018 IPR008715 SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 IX88_13775 f7b050b0b8b94a012b5d03591ddadaba 199 Gene3D G3DSA:3.40.50.150 24 187 1.5E-41 T 11-10-2018 IX88_00230 087a8336a15f8a061ead1ac7323f8016 271 Gene3D G3DSA:3.40.50.720 1 269 2.3E-52 T 11-10-2018 IX88_00230 087a8336a15f8a061ead1ac7323f8016 271 SUPERFAMILY SSF51735 7 230 1.17E-22 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_00230 087a8336a15f8a061ead1ac7323f8016 271 Pfam PF13460 NAD(P)H-binding 9 190 8.0E-8 T 11-10-2018 IPR016040 NAD(P)-binding domain IX88_16945 f78b049b471ffff3822a52a4566f0fe8 415 SUPERFAMILY SSF103473 8 410 1.01E-25 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_16945 f78b049b471ffff3822a52a4566f0fe8 415 Pfam PF13000 Acetyl-coenzyme A transporter 1 9 157 7.3E-22 T 11-10-2018 IPR024371 Acetyl-coenzyme A transporter 1-like GO:0008521|GO:0016021 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 IX88_16945 f78b049b471ffff3822a52a4566f0fe8 415 Gene3D G3DSA:1.20.1250.20 3 407 2.3E-19 T 11-10-2018 IX88_14200 d5d9fcaf6c7c0cf495dbb55cd718d471 61 Gene3D G3DSA:1.10.260.40 1 58 8.3E-8 T 11-10-2018 IX88_14200 d5d9fcaf6c7c0cf495dbb55cd718d471 61 SUPERFAMILY SSF47413 1 53 8.04E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IX88_14200 d5d9fcaf6c7c0cf495dbb55cd718d471 61 Pfam PF14549 DNA-binding transcriptional regulator Cro 16 51 2.4E-9 T 11-10-2018 IX88_15895 987c15d5661d099af5da5344d281c44b 236 Pfam PF13394 4Fe-4S single cluster domain 39 120 2.7E-11 T 11-10-2018 IX88_15895 987c15d5661d099af5da5344d281c44b 236 PIRSF PIRSF000370 16 236 2.1E-64 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 IX88_15895 987c15d5661d099af5da5344d281c44b 236 SUPERFAMILY SSF102114 41 119 3.27E-15 T 11-10-2018 IX88_15895 987c15d5661d099af5da5344d281c44b 236 Pfam PF04055 Radical SAM superfamily 42 123 4.4E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 IX88_15895 987c15d5661d099af5da5344d281c44b 236 Gene3D G3DSA:3.20.20.70 18 230 2.1E-34 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_15895 987c15d5661d099af5da5344d281c44b 236 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 18 233 36.159 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 IX88_15895 987c15d5661d099af5da5344d281c44b 236 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 18 236 2.3E-102 T 11-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE IX88_04565 7a7dd46fa87a67841b4c201b10778245 206 Pfam PF01618 MotA/TolQ/ExbB proton channel family 57 172 1.4E-32 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel IX88_13440 ec14885f73df6bd85ae125d7df460375 198 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 7 143 7.8E-8 T 11-10-2018 IPR007296 Domain of unknown function DUF403 IX88_09920 ea62b6c23ee7e34c96758358d0186fe6 721 Pfam PF01274 Malate synthase 17 693 6.2E-163 T 11-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 IX88_09920 ea62b6c23ee7e34c96758358d0186fe6 721 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 716 0.0 T 11-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 IX88_09920 ea62b6c23ee7e34c96758358d0186fe6 721 Hamap MF_00641 Malate synthase G [glcB]. 1 721 378.339 T 11-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 IX88_09920 ea62b6c23ee7e34c96758358d0186fe6 721 Gene3D G3DSA:2.170.170.11 132 261 4.0E-265 T 11-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 IX88_09920 ea62b6c23ee7e34c96758358d0186fe6 721 Gene3D G3DSA:3.20.20.360 10 578 4.0E-265 T 11-10-2018 IX88_09920 ea62b6c23ee7e34c96758358d0186fe6 721 SUPERFAMILY SSF51645 3 717 3.27E-293 T 11-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 IX88_09920 ea62b6c23ee7e34c96758358d0186fe6 721 Gene3D G3DSA:1.20.1220.12 579 721 2.9E-72 T 11-10-2018 IX88_07485 dfc1660bf8670f6979f86e1272bfa88d 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 6.4E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07485 dfc1660bf8670f6979f86e1272bfa88d 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 6.4E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07485 dfc1660bf8670f6979f86e1272bfa88d 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 6.4E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07485 dfc1660bf8670f6979f86e1272bfa88d 135 Pfam PF13411 MerR HTH family regulatory protein 1 66 5.2E-20 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07485 dfc1660bf8670f6979f86e1272bfa88d 135 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 6.6E-65 T 11-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 IX88_07485 dfc1660bf8670f6979f86e1272bfa88d 135 Gene3D G3DSA:1.10.1660.10 1 125 6.3E-35 T 11-10-2018 IX88_07485 dfc1660bf8670f6979f86e1272bfa88d 135 SUPERFAMILY SSF46955 1 117 3.19E-36 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily IX88_07485 dfc1660bf8670f6979f86e1272bfa88d 135 SMART SM00422 1 70 1.2E-27 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 IX88_07735 126460ad03c2c411e689b01174446c90 298 Pfam PF00892 EamA-like transporter family 17 146 6.7E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_07735 126460ad03c2c411e689b01174446c90 298 Pfam PF00892 EamA-like transporter family 160 284 2.5E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_07735 126460ad03c2c411e689b01174446c90 298 SUPERFAMILY SSF103481 190 285 2.48E-14 T 11-10-2018 IX88_07735 126460ad03c2c411e689b01174446c90 298 SUPERFAMILY SSF103481 50 150 2.09E-16 T 11-10-2018 IX88_04235 a0f8fb2ff0c7988fd4b76946ffc3bd1d 110 Gene3D G3DSA:3.20.160.10 1 110 8.6E-45 T 11-10-2018 IPR038604 Type III effector HopJ superfamily IX88_04235 a0f8fb2ff0c7988fd4b76946ffc3bd1d 110 Pfam PF08888 HopJ type III effector protein 3 107 3.9E-42 T 11-10-2018 IPR014984 HopJ type III effector protein IX88_16265 8780e6e4d07113a54fca1add04b2e1e9 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 57 1.9E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_16265 8780e6e4d07113a54fca1add04b2e1e9 192 SUPERFAMILY SSF46689 13 69 3.95E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_16265 8780e6e4d07113a54fca1add04b2e1e9 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 7.2E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_16265 8780e6e4d07113a54fca1add04b2e1e9 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 7.2E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_16265 8780e6e4d07113a54fca1add04b2e1e9 192 Gene3D G3DSA:1.10.357.10 7 179 4.4E-19 T 11-10-2018 IX88_11895 e8b90401430b5c63702a1f74b79d95a3 433 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 414 2.0E-140 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 IX88_11895 e8b90401430b5c63702a1f74b79d95a3 433 Pfam PF05525 Branched-chain amino acid transport protein 8 428 6.3E-142 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 IX88_01680 b232e14ac926602d82bc15e76829b8b8 455 PIRSF PIRSF006603 1 454 1.8E-105 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 IX88_01680 b232e14ac926602d82bc15e76829b8b8 455 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 424 1.1E-73 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 IX88_01680 b232e14ac926602d82bc15e76829b8b8 455 Pfam PF01554 MatE 252 413 2.6E-27 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 IX88_01680 b232e14ac926602d82bc15e76829b8b8 455 Pfam PF01554 MatE 23 184 6.8E-35 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 IX88_09970 889d696df7dc304d6414ede857638d28 312 SUPERFAMILY SSF161098 90 296 2.75E-15 T 11-10-2018 IPR035906 MetI-like superfamily IX88_09970 889d696df7dc304d6414ede857638d28 312 Gene3D G3DSA:1.10.3720.10 84 306 2.0E-20 T 11-10-2018 IPR035906 MetI-like superfamily IX88_09970 889d696df7dc304d6414ede857638d28 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 309 1.4E-36 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_05440 b34d0d9b0682fcce3b40fcf3b20319e0 205 Gene3D G3DSA:3.90.79.10 2 181 1.1E-44 T 11-10-2018 IX88_05440 b34d0d9b0682fcce3b40fcf3b20319e0 205 Pfam PF00293 NUDIX domain 24 138 6.0E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 IX88_05440 b34d0d9b0682fcce3b40fcf3b20319e0 205 SUPERFAMILY SSF55811 24 177 5.42E-29 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 IX88_01770 ef288f20be935628a03024ddd783fca0 171 PIRSF PIRSF006162 14 171 2.7E-49 T 11-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 IX88_01770 ef288f20be935628a03024ddd783fca0 171 Pfam PF04608 Phosphatidylglycerophosphatase A 25 167 7.8E-47 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 IX88_01770 ef288f20be935628a03024ddd783fca0 171 SUPERFAMILY SSF101307 18 168 1.01E-41 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 IX88_15975 fe78d7ea8ba4ea63ae6ef1c4c46291a1 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 113 1.5E-25 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 IX88_15975 fe78d7ea8ba4ea63ae6ef1c4c46291a1 135 Pfam PF03061 Thioesterase superfamily 19 101 2.6E-15 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 IX88_15975 fe78d7ea8ba4ea63ae6ef1c4c46291a1 135 PIRSF PIRSF003230 1 135 1.4E-51 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 IX88_15975 fe78d7ea8ba4ea63ae6ef1c4c46291a1 135 Gene3D G3DSA:3.10.129.10 1 130 1.5E-39 T 11-10-2018 IX88_15975 fe78d7ea8ba4ea63ae6ef1c4c46291a1 135 SUPERFAMILY SSF54637 2 129 1.94E-37 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_15975 fe78d7ea8ba4ea63ae6ef1c4c46291a1 135 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 5 126 2.0E-45 T 11-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 IX88_13030 6b1469a7a207049d7ae7c4fe8d945f95 570 SMART SM00382 12 168 8.8E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_13030 6b1469a7a207049d7ae7c4fe8d945f95 570 Gene3D G3DSA:3.40.50.300 184 398 1.9E-6 T 11-10-2018 IX88_13030 6b1469a7a207049d7ae7c4fe8d945f95 570 Pfam PF14493 Helix-turn-helix domain 466 566 3.2E-18 T 11-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 IX88_13030 6b1469a7a207049d7ae7c4fe8d945f95 570 SUPERFAMILY SSF52540 125 407 2.66E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_13030 6b1469a7a207049d7ae7c4fe8d945f95 570 SUPERFAMILY SSF52540 3 178 4.81E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_13030 6b1469a7a207049d7ae7c4fe8d945f95 570 Pfam PF05970 PIF1-like helicase 196 297 1.4E-7 T 11-10-2018 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 IX88_13030 6b1469a7a207049d7ae7c4fe8d945f95 570 Pfam PF05970 PIF1-like helicase 11 182 3.1E-37 T 11-10-2018 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 IX88_13030 6b1469a7a207049d7ae7c4fe8d945f95 570 Gene3D G3DSA:3.40.50.300 1 174 2.7E-32 T 11-10-2018 IX88_01570 bdf02074dab902f631f066a29499549d 167 Pfam PF04115 Ureidoglycolate lyase 4 165 3.7E-48 T 11-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 IX88_01570 bdf02074dab902f631f066a29499549d 167 PIRSF PIRSF017306 3 165 8.0E-41 T 11-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 IX88_01570 bdf02074dab902f631f066a29499549d 167 SUPERFAMILY SSF51182 6 164 1.6E-50 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_01570 bdf02074dab902f631f066a29499549d 167 Gene3D G3DSA:2.60.120.480 4 167 3.7E-52 T 11-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 IX88_11175 9ced7d07205dbbef3822eebeb3314cbc 206 SUPERFAMILY SSF48498 81 166 5.04E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_11175 9ced7d07205dbbef3822eebeb3314cbc 206 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 154 199 1.5E-5 T 11-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type IX88_11175 9ced7d07205dbbef3822eebeb3314cbc 206 SUPERFAMILY SSF46689 7 82 2.92E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_11175 9ced7d07205dbbef3822eebeb3314cbc 206 Gene3D G3DSA:1.10.357.10 55 200 3.6E-32 T 11-10-2018 IX88_11175 9ced7d07205dbbef3822eebeb3314cbc 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 8.7E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_11175 9ced7d07205dbbef3822eebeb3314cbc 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.2E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_11175 9ced7d07205dbbef3822eebeb3314cbc 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.2E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_11175 9ced7d07205dbbef3822eebeb3314cbc 206 Gene3D G3DSA:1.10.10.60 4 54 2.8E-16 T 11-10-2018 IX88_15090 5ce822c2ed8fc728974dadb77cc0163d 910 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 181 1.3E-25 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain IX88_15090 5ce822c2ed8fc728974dadb77cc0163d 910 Gene3D G3DSA:2.170.130.10 46 185 5.8E-37 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily IX88_15090 5ce822c2ed8fc728974dadb77cc0163d 910 SUPERFAMILY SSF56935 52 910 1.59E-91 T 11-10-2018 IX88_15090 5ce822c2ed8fc728974dadb77cc0163d 910 Pfam PF00593 TonB dependent receptor 395 909 3.1E-37 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel IX88_13290 bf5792d532761b6d5983f3a4d01cd35f 342 SMART SM00342 251 334 1.7E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_13290 bf5792d532761b6d5983f3a4d01cd35f 342 SUPERFAMILY SSF46689 287 337 1.97E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_13290 bf5792d532761b6d5983f3a4d01cd35f 342 Pfam PF12833 Helix-turn-helix domain 258 335 5.1E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_13290 bf5792d532761b6d5983f3a4d01cd35f 342 Gene3D G3DSA:1.10.10.60 234 339 9.7E-25 T 11-10-2018 IX88_13290 bf5792d532761b6d5983f3a4d01cd35f 342 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 206 3.6E-35 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal IX88_04760 35c10135a9850ba9e469651e721daf00 280 Pfam PF04072 Leucine carboxyl methyltransferase 58 182 1.7E-10 T 11-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 IX88_04760 35c10135a9850ba9e469651e721daf00 280 SUPERFAMILY SSF53335 53 271 1.36E-30 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_04760 35c10135a9850ba9e469651e721daf00 280 Gene3D G3DSA:3.40.50.150 30 268 1.2E-20 T 11-10-2018 IX88_12825 5a882635242813d638637d3b8e0ef15a 329 ProSitePatterns PS01054 Transaldolase signature 1. 32 40 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 IX88_12825 5a882635242813d638637d3b8e0ef15a 329 ProSitePatterns PS00958 Transaldolase active site. 130 147 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 IX88_12825 5a882635242813d638637d3b8e0ef15a 329 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 15 314 2.8E-91 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 IX88_12825 5a882635242813d638637d3b8e0ef15a 329 Gene3D G3DSA:3.20.20.70 2 326 1.9E-122 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_12825 5a882635242813d638637d3b8e0ef15a 329 SUPERFAMILY SSF51569 4 319 6.07E-101 T 11-10-2018 IX88_12825 5a882635242813d638637d3b8e0ef15a 329 TIGRFAM TIGR00874 talAB: transaldolase 5 318 4.0E-128 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 IX88_12010 3f98be8c00cde85e56c78333ed8f2f2b 119 Pfam PF05666 Fels-1 Prophage Protein-like 25 60 2.8E-14 T 11-10-2018 IPR008617 Uncharacterised protein family, YcgJ IX88_12010 3f98be8c00cde85e56c78333ed8f2f2b 119 Pfam PF05666 Fels-1 Prophage Protein-like 68 94 1.3E-9 T 11-10-2018 IPR008617 Uncharacterised protein family, YcgJ IX88_06735 f4030bfb8e39acbbfff330cd8e1f652e 101 SUPERFAMILY SSF50022 1 101 4.98E-32 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_06735 f4030bfb8e39acbbfff330cd8e1f652e 101 Gene3D G3DSA:2.102.10.10 1 101 1.5E-33 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_06735 f4030bfb8e39acbbfff330cd8e1f652e 101 Pfam PF00355 Rieske [2Fe-2S] domain 2 89 2.4E-21 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 IX88_10105 cc91d014f20a053f14946705b90f5488 315 Pfam PF12833 Helix-turn-helix domain 228 306 2.3E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_10105 cc91d014f20a053f14946705b90f5488 315 Gene3D G3DSA:1.10.10.60 202 309 2.1E-26 T 11-10-2018 IX88_10105 cc91d014f20a053f14946705b90f5488 315 SUPERFAMILY SSF51182 40 75 6.5E-5 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_10105 cc91d014f20a053f14946705b90f5488 315 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 289 9.8E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_10105 cc91d014f20a053f14946705b90f5488 315 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 289 305 9.8E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 IX88_10105 cc91d014f20a053f14946705b90f5488 315 SUPERFAMILY SSF46689 258 309 3.14E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_10105 cc91d014f20a053f14946705b90f5488 315 SUPERFAMILY SSF46689 206 256 5.02E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_10105 cc91d014f20a053f14946705b90f5488 315 SMART SM00342 222 305 9.4E-29 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 IX88_10105 cc91d014f20a053f14946705b90f5488 315 Pfam PF12852 Cupin 2 190 6.3E-27 T 11-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain IX88_11015 5364cb85da9c5532f98ee15b3ca2f2e4 443 PIRSF PIRSF028135 1 443 9.2E-158 T 11-10-2018 IPR016869 Uncharacterised conserved protein UCP028135, HipA-like IX88_11015 5364cb85da9c5532f98ee15b3ca2f2e4 443 Pfam PF07804 HipA-like C-terminal domain 167 365 5.6E-28 T 11-10-2018 IPR012893 HipA-like, C-terminal IX88_08530 c735e87cf13b3cfb3e0b09a8e8d82c6f 579 Gene3D G3DSA:3.10.20.310 61 160 2.2E-6 T 11-10-2018 IX88_08530 c735e87cf13b3cfb3e0b09a8e8d82c6f 579 Gene3D G3DSA:2.40.160.50 199 577 2.4E-91 T 11-10-2018 IX88_08530 c735e87cf13b3cfb3e0b09a8e8d82c6f 579 Pfam PF17287 POTRA domain 162 213 1.0E-11 T 11-10-2018 IPR035251 ShlB, POTRA domain IX88_08530 c735e87cf13b3cfb3e0b09a8e8d82c6f 579 Pfam PF08479 POTRA domain, ShlB-type 97 157 4.2E-12 T 11-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type IX88_08530 c735e87cf13b3cfb3e0b09a8e8d82c6f 579 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 223 543 1.7E-99 T 11-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal IX88_08530 c735e87cf13b3cfb3e0b09a8e8d82c6f 579 PIRSF PIRSF029745 3 579 1.1E-154 T 11-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 IX88_03035 f105addd31577ace0146878d81408702 132 Pfam PF03899 ATP synthase I chain 16 112 2.4E-20 T 11-10-2018 IPR005598 ATP synthase protein I IX88_01585 4c426bc1ff8687b717aa00f35c20982c 447 Gene3D G3DSA:3.40.50.1820 156 415 1.5E-25 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_01585 4c426bc1ff8687b717aa00f35c20982c 447 SUPERFAMILY SSF53474 155 372 9.01E-20 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_01585 4c426bc1ff8687b717aa00f35c20982c 447 Pfam PF07819 PGAP1-like protein 152 374 7.9E-33 T 11-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 IX88_04670 381a10464640e777fa493df30b9b1ee7 227 Gene3D G3DSA:4.10.860.20 180 227 2.2E-21 T 11-10-2018 IX88_04670 381a10464640e777fa493df30b9b1ee7 227 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 3.2E-12 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 IX88_04670 381a10464640e777fa493df30b9b1ee7 227 SUPERFAMILY SSF51197 4 179 2.61E-6 T 11-10-2018 IX88_04670 381a10464640e777fa493df30b9b1ee7 227 Gene3D G3DSA:2.60.120.620 1 178 8.0E-44 T 11-10-2018 IX88_04670 381a10464640e777fa493df30b9b1ee7 227 SMART SM00702 2 177 6.1E-20 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 IX88_04670 381a10464640e777fa493df30b9b1ee7 227 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 227 45.49 T 11-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 IX88_17155 0bf6addd801f1acfaa07f968ff76d659 404 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 390 6.0E-88 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 IX88_17155 0bf6addd801f1acfaa07f968ff76d659 404 Pfam PF07690 Major Facilitator Superfamily 18 361 1.5E-41 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_17155 0bf6addd801f1acfaa07f968ff76d659 404 SUPERFAMILY SSF103473 8 402 2.49E-58 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_17155 0bf6addd801f1acfaa07f968ff76d659 404 Gene3D G3DSA:1.20.1720.10 14 394 1.1E-103 T 11-10-2018 IX88_03705 323b6abaa06d647be6cb0df5a7e913c3 278 SUPERFAMILY SSF56112 12 263 3.93E-33 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily IX88_03705 323b6abaa06d647be6cb0df5a7e913c3 278 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 10 256 3.1E-109 T 11-10-2018 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 IX88_12095 101864605a7c7521f644e6cefa2e2046 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 241 41.399 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 IX88_12095 101864605a7c7521f644e6cefa2e2046 242 Gene3D G3DSA:3.40.1160.10 3 242 2.2E-66 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily IX88_12095 101864605a7c7521f644e6cefa2e2046 242 Pfam PF00696 Amino acid kinase family 11 220 9.7E-24 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 IX88_12095 101864605a7c7521f644e6cefa2e2046 242 SUPERFAMILY SSF53633 7 240 3.67E-63 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily IX88_12095 101864605a7c7521f644e6cefa2e2046 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.6E-93 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 IX88_12095 101864605a7c7521f644e6cefa2e2046 242 PIRSF PIRSF005650 4 242 5.2E-84 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 IX88_00310 4b076e7ca84980153e276a12e0ba8775 316 Gene3D G3DSA:3.40.1500.10 1 316 2.6E-138 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IX88_00310 4b076e7ca84980153e276a12e0ba8775 316 Pfam PF01218 Coproporphyrinogen III oxidase 11 309 8.4E-119 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IX88_00310 4b076e7ca84980153e276a12e0ba8775 316 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 173 197 - T 11-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IX88_00310 4b076e7ca84980153e276a12e0ba8775 316 PIRSF PIRSF000166 1 310 7.4E-119 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IX88_00310 4b076e7ca84980153e276a12e0ba8775 316 SUPERFAMILY SSF102886 7 309 1.44E-124 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IX88_00310 4b076e7ca84980153e276a12e0ba8775 316 PRINTS PR00073 Coprogen oxidase signature 132 154 2.0E-75 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IX88_00310 4b076e7ca84980153e276a12e0ba8775 316 PRINTS PR00073 Coprogen oxidase signature 97 121 2.0E-75 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IX88_00310 4b076e7ca84980153e276a12e0ba8775 316 PRINTS PR00073 Coprogen oxidase signature 241 268 2.0E-75 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IX88_00310 4b076e7ca84980153e276a12e0ba8775 316 PRINTS PR00073 Coprogen oxidase signature 269 295 2.0E-75 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IX88_00310 4b076e7ca84980153e276a12e0ba8775 316 PRINTS PR00073 Coprogen oxidase signature 169 198 2.0E-75 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IX88_00310 4b076e7ca84980153e276a12e0ba8775 316 PRINTS PR00073 Coprogen oxidase signature 38 54 2.0E-75 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IX88_00310 4b076e7ca84980153e276a12e0ba8775 316 PRINTS PR00073 Coprogen oxidase signature 55 76 2.0E-75 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 IX88_07200 74007301b0c10dbff646cb0c1eee50d2 194 PIRSF PIRSF006806 1 189 1.7E-32 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase IX88_07200 74007301b0c10dbff646cb0c1eee50d2 194 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 7 186 1.6E-40 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase IX88_07200 74007301b0c10dbff646cb0c1eee50d2 194 SUPERFAMILY SSF100950 6 193 3.21E-43 T 11-10-2018 IPR037171 NagB/RpiA transferase-like IX88_07200 74007301b0c10dbff646cb0c1eee50d2 194 Gene3D G3DSA:3.40.50.10420 5 194 4.6E-45 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily IX88_07200 74007301b0c10dbff646cb0c1eee50d2 194 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 186 4.5E-32 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase IX88_08015 465a98e4da33c43687451f5d05ea23a9 162 SUPERFAMILY SSF142433 2 151 3.4E-25 T 11-10-2018 IPR036653 CinA-like, C-terminal IX88_08015 465a98e4da33c43687451f5d05ea23a9 162 Gene3D G3DSA:3.90.950.20 1 158 4.6E-28 T 11-10-2018 IPR036653 CinA-like, C-terminal IX88_08015 465a98e4da33c43687451f5d05ea23a9 162 Pfam PF02464 Competence-damaged protein 3 145 5.3E-21 T 11-10-2018 IPR008136 CinA, C-terminal IX88_11715 5fbaec13fed6285499e22f1e7eba9d8f 120 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 17 115 2.0E-34 T 11-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 IX88_11715 5fbaec13fed6285499e22f1e7eba9d8f 120 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 12 116 21.813 T 11-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 IX88_17665 7e69db7450b947be6ef8c02c29d3dfd4 351 Gene3D G3DSA:3.40.50.2000 150 330 3.2E-50 T 11-10-2018 IX88_17665 7e69db7450b947be6ef8c02c29d3dfd4 351 Gene3D G3DSA:3.40.50.2000 22 339 3.2E-50 T 11-10-2018 IX88_17665 7e69db7450b947be6ef8c02c29d3dfd4 351 Pfam PF00534 Glycosyl transferases group 1 169 324 4.8E-31 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 IX88_17665 7e69db7450b947be6ef8c02c29d3dfd4 351 SUPERFAMILY SSF53756 6 346 2.26E-55 T 11-10-2018 IX88_17665 7e69db7450b947be6ef8c02c29d3dfd4 351 Pfam PF13439 Glycosyltransferase Family 4 13 112 3.3E-8 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 IX88_15510 86230956b5bbb692c550144895b15637 212 Gene3D G3DSA:3.30.2350.10 5 211 1.3E-63 T 11-10-2018 IX88_15510 86230956b5bbb692c550144895b15637 212 Pfam PF00849 RNA pseudouridylate synthase 15 163 2.3E-27 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_15510 86230956b5bbb692c550144895b15637 212 SUPERFAMILY SSF55120 7 211 1.15E-62 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_15510 86230956b5bbb692c550144895b15637 212 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 52 66 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 IX88_01890 f72d63cb7f7d6c73276b253cf9d759fa 312 Gene3D G3DSA:1.20.1530.20 1 309 1.5E-119 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily IX88_01890 f72d63cb7f7d6c73276b253cf9d759fa 312 Pfam PF01758 Sodium Bile acid symporter family 43 219 5.4E-46 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 IX88_08715 72658fc0456fb89c24c4a392b14bc837 280 SMART SM00346 33 123 1.6E-20 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 IX88_08715 72658fc0456fb89c24c4a392b14bc837 280 SUPERFAMILY SSF46785 33 107 7.09E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_08715 72658fc0456fb89c24c4a392b14bc837 280 Gene3D G3DSA:1.10.10.10 22 101 4.6E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_08715 72658fc0456fb89c24c4a392b14bc837 280 Pfam PF09339 IclR helix-turn-helix domain 35 85 6.7E-16 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 IX88_08715 72658fc0456fb89c24c4a392b14bc837 280 SUPERFAMILY SSF55781 100 277 2.81E-36 T 11-10-2018 IX88_08715 72658fc0456fb89c24c4a392b14bc837 280 Pfam PF01614 Bacterial transcriptional regulator 153 268 3.3E-12 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal IX88_08715 72658fc0456fb89c24c4a392b14bc837 280 Gene3D G3DSA:3.30.450.40 107 274 1.8E-30 T 11-10-2018 IPR029016 GAF-like domain superfamily IX88_00535 fa5bf95c04a6f6382c5ed8238478771b 286 Pfam PF00892 EamA-like transporter family 147 278 1.2E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_00535 fa5bf95c04a6f6382c5ed8238478771b 286 SUPERFAMILY SSF103481 186 283 2.22E-12 T 11-10-2018 IX88_04870 b6f8ac25343267223bd20784237da433 267 Gene3D G3DSA:3.40.50.720 1 267 2.0E-66 T 11-10-2018 IX88_04870 b6f8ac25343267223bd20784237da433 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 255 6.5E-88 T 11-10-2018 IX88_04870 b6f8ac25343267223bd20784237da433 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 2.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_04870 b6f8ac25343267223bd20784237da433 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_04870 b6f8ac25343267223bd20784237da433 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_04870 b6f8ac25343267223bd20784237da433 267 SUPERFAMILY SSF51735 8 258 1.43E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_04870 b6f8ac25343267223bd20784237da433 267 PIRSF PIRSF000094 3 263 1.1E-113 T 11-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 IX88_15720 4dab65d125f1a50a09afeac6df1384be 195 PRINTS PR01171 Bacterial lipocalin signature 155 166 2.1E-9 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 IX88_15720 4dab65d125f1a50a09afeac6df1384be 195 PRINTS PR01171 Bacterial lipocalin signature 182 192 2.1E-9 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 IX88_15720 4dab65d125f1a50a09afeac6df1384be 195 PRINTS PR01171 Bacterial lipocalin signature 46 60 2.1E-9 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 IX88_15720 4dab65d125f1a50a09afeac6df1384be 195 PRINTS PR01171 Bacterial lipocalin signature 83 92 2.1E-9 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 IX88_15720 4dab65d125f1a50a09afeac6df1384be 195 SUPERFAMILY SSF50814 38 193 1.5E-41 T 11-10-2018 IPR012674 Calycin IX88_15720 4dab65d125f1a50a09afeac6df1384be 195 PIRSF PIRSF036893 7 195 6.3E-58 T 11-10-2018 IPR022271 Lipocalin, ApoD type IX88_15720 4dab65d125f1a50a09afeac6df1384be 195 Pfam PF08212 Lipocalin-like domain 46 192 3.0E-46 T 11-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain IX88_15720 4dab65d125f1a50a09afeac6df1384be 195 ProSitePatterns PS00213 Lipocalin signature. 47 58 - T 11-10-2018 IPR022272 Lipocalin family conserved site IX88_15720 4dab65d125f1a50a09afeac6df1384be 195 Gene3D G3DSA:2.40.128.20 27 194 5.5E-49 T 11-10-2018 IPR012674 Calycin IX88_05305 f57e1b520cecf2c21b10ee981f4748de 274 Gene3D G3DSA:3.60.110.10 1 274 3.1E-82 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily IX88_05305 f57e1b520cecf2c21b10ee981f4748de 274 SUPERFAMILY SSF56317 3 269 4.32E-68 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily IX88_05305 f57e1b520cecf2c21b10ee981f4748de 274 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 11-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site IX88_05305 f57e1b520cecf2c21b10ee981f4748de 274 Pfam PF00795 Carbon-nitrogen hydrolase 3 255 3.4E-48 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 IX88_06995 74bcd1db35263b2b7c77c73b25035448 145 Gene3D G3DSA:3.30.530.20 2 145 1.0E-19 T 11-10-2018 IPR023393 START-like domain superfamily IX88_06995 74bcd1db35263b2b7c77c73b25035448 145 SUPERFAMILY SSF55961 2 139 1.4E-21 T 11-10-2018 IX88_06995 74bcd1db35263b2b7c77c73b25035448 145 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 11 122 4.9E-10 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like IX88_11370 f2c03220cfbe5c94f0731fdc3f028a42 332 Gene3D G3DSA:3.90.850.10 105 320 3.1E-12 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 IX88_11370 f2c03220cfbe5c94f0731fdc3f028a42 332 PIRSF PIRSF033905 1 329 9.6E-157 T 11-10-2018 IPR009645 Uncharacterised conserved protein GguC IX88_11370 f2c03220cfbe5c94f0731fdc3f028a42 332 SUPERFAMILY SSF56529 116 312 2.14E-24 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 IX88_12165 042314e26a1674bb2be020a7be72dbe7 335 Gene3D G3DSA:3.90.25.10 193 328 6.2E-91 T 11-10-2018 IX88_12165 042314e26a1674bb2be020a7be72dbe7 335 Gene3D G3DSA:3.40.50.720 2 273 6.2E-91 T 11-10-2018 IX88_12165 042314e26a1674bb2be020a7be72dbe7 335 SUPERFAMILY SSF51735 2 332 1.29E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_12165 042314e26a1674bb2be020a7be72dbe7 335 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 1 333 9.3E-79 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 IX88_12165 042314e26a1674bb2be020a7be72dbe7 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 260 2.5E-40 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 IX88_06710 861a218b2af2466d65e22f13e3fdce08 139 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 5 139 1.8E-35 T 11-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 IX88_06710 861a218b2af2466d65e22f13e3fdce08 139 Pfam PF13994 PgaD-like protein 6 136 9.4E-27 T 11-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 IX88_00670 1d57ad9fd947b479ba44e72576ef4255 186 Gene3D G3DSA:3.10.310.50 35 182 2.9E-40 T 11-10-2018 IX88_00670 1d57ad9fd947b479ba44e72576ef4255 186 Pfam PF04536 TPM domain 39 161 4.4E-15 T 11-10-2018 IPR007621 TPM domain IX88_00445 207876652f99c55ff3d8bf6fe724bfb6 477 Gene3D G3DSA:1.20.1740.10 20 476 1.3E-64 T 11-10-2018 IX88_00445 207876652f99c55ff3d8bf6fe724bfb6 477 PIRSF PIRSF006060 2 477 3.7E-80 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_00445 207876652f99c55ff3d8bf6fe724bfb6 477 Pfam PF00324 Amino acid permease 28 472 2.3E-112 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 IX88_00445 207876652f99c55ff3d8bf6fe724bfb6 477 ProSitePatterns PS00218 Amino acid permeases signature. 53 84 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 IX88_06945 b03c042a2e196c2c9687c51ffd8a9f8b 230 SMART SM00382 34 223 1.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_06945 b03c042a2e196c2c9687c51ffd8a9f8b 230 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_06945 b03c042a2e196c2c9687c51ffd8a9f8b 230 Gene3D G3DSA:3.40.50.300 4 229 2.2E-67 T 11-10-2018 IX88_06945 b03c042a2e196c2c9687c51ffd8a9f8b 230 Pfam PF00005 ABC transporter 25 174 1.3E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_06945 b03c042a2e196c2c9687c51ffd8a9f8b 230 SUPERFAMILY SSF52540 6 226 6.08E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_03095 e2e1312b4eb6fe0a05b269f7bc739cd9 404 Pfam PF07690 Major Facilitator Superfamily 26 337 4.7E-30 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_03095 e2e1312b4eb6fe0a05b269f7bc739cd9 404 Gene3D G3DSA:1.20.1250.20 14 392 2.9E-41 T 11-10-2018 IX88_03095 e2e1312b4eb6fe0a05b269f7bc739cd9 404 SUPERFAMILY SSF103473 10 393 3.27E-53 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_11860 b2efc5b5d19971ab877835fe71930f59 141 Pfam PF11042 Protein of unknown function (DUF2750) 36 128 3.2E-16 T 11-10-2018 IPR021284 Protein of unknown function DUF2750 IX88_12395 5cd4e4beb70e66c8b123dfa6e56b9694 106 Gene3D G3DSA:2.40.128.380 1 106 2.7E-29 T 11-10-2018 IX88_12395 5cd4e4beb70e66c8b123dfa6e56b9694 106 Pfam PF16518 T3SS negative regulator,GrlR 1 104 1.6E-23 T 11-10-2018 IPR032417 T3SS negative regulator GrlR IX88_01155 1ed39980b07eade21b36ef6286b6d0de 275 Pfam PF13489 Methyltransferase domain 46 216 8.5E-10 T 11-10-2018 IX88_01155 1ed39980b07eade21b36ef6286b6d0de 275 Gene3D G3DSA:3.40.50.150 33 275 7.4E-26 T 11-10-2018 IX88_01155 1ed39980b07eade21b36ef6286b6d0de 275 SUPERFAMILY SSF53335 29 273 2.69E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_10665 be7cafdf6a0904658c939796d08c1eca 447 Pfam PF07690 Major Facilitator Superfamily 27 334 9.3E-45 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_10665 be7cafdf6a0904658c939796d08c1eca 447 Gene3D G3DSA:1.20.1250.20 11 224 1.1E-44 T 11-10-2018 IX88_10665 be7cafdf6a0904658c939796d08c1eca 447 Gene3D G3DSA:1.20.1250.20 247 444 3.6E-23 T 11-10-2018 IX88_10665 be7cafdf6a0904658c939796d08c1eca 447 SUPERFAMILY SSF103473 9 431 2.09E-79 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_10665 be7cafdf6a0904658c939796d08c1eca 447 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_10665 be7cafdf6a0904658c939796d08c1eca 447 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 93 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_13060 63322cf6dd60e086007ba4435cba7525 461 PIRSF PIRSF018788 1 459 3.0E-233 T 11-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 IX88_13060 63322cf6dd60e086007ba4435cba7525 461 Gene3D G3DSA:3.20.20.70 142 450 1.7E-146 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_13060 63322cf6dd60e086007ba4435cba7525 461 Gene3D G3DSA:1.10.220.70 55 141 1.2E-34 T 11-10-2018 IX88_13060 63322cf6dd60e086007ba4435cba7525 461 Gene3D G3DSA:2.30.170.30 1 54 2.5E-22 T 11-10-2018 IX88_13060 63322cf6dd60e086007ba4435cba7525 461 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 442 1.8E-218 T 11-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 IX88_16445 d4dc2094d54b0a336d35dfac865e325f 287 Gene3D G3DSA:1.10.530.10 50 216 1.2E-51 T 11-10-2018 IX88_16445 d4dc2094d54b0a336d35dfac865e325f 287 Pfam PF01464 Transglycosylase SLT domain 93 198 6.0E-31 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 IX88_16445 d4dc2094d54b0a336d35dfac865e325f 287 SUPERFAMILY SSF53955 86 211 8.44E-50 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily IX88_15920 d9b5d792f4be6c683c4b41651453d7a9 189 Gene3D G3DSA:3.40.33.10 15 187 1.2E-39 T 11-10-2018 IPR035940 CAP superfamily IX88_15920 d9b5d792f4be6c683c4b41651453d7a9 189 Pfam PF00188 Cysteine-rich secretory protein family 59 186 1.4E-15 T 11-10-2018 IPR014044 CAP domain IX88_15920 d9b5d792f4be6c683c4b41651453d7a9 189 SUPERFAMILY SSF55797 51 187 3.53E-18 T 11-10-2018 IPR035940 CAP superfamily IX88_17410 3cb83dcd87c18ef21ad1f87eaa907c10 117 Gene3D G3DSA:1.10.3730.20 12 115 4.7E-16 T 11-10-2018 IX88_17410 3cb83dcd87c18ef21ad1f87eaa907c10 117 SUPERFAMILY SSF103481 13 113 1.96E-12 T 11-10-2018 IX88_17410 3cb83dcd87c18ef21ad1f87eaa907c10 117 Pfam PF00893 Small Multidrug Resistance protein 13 102 9.5E-12 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 IX88_01810 4f5c232bc715cbda1417ace8929d0266 470 PIRSF PIRSF006060 1 467 2.1E-69 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_01810 4f5c232bc715cbda1417ace8929d0266 470 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 IX88_01810 4f5c232bc715cbda1417ace8929d0266 470 Gene3D G3DSA:1.20.1740.10 6 465 1.0E-66 T 11-10-2018 IX88_01810 4f5c232bc715cbda1417ace8929d0266 470 Pfam PF00324 Amino acid permease 15 450 2.3E-106 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 IX88_15785 43d9d4b28a1281d9fd23794ff6c2e225 237 Gene3D G3DSA:1.20.1440.120 74 237 5.0E-43 T 11-10-2018 IX88_15785 43d9d4b28a1281d9fd23794ff6c2e225 237 SUPERFAMILY SSF50249 1 69 5.14E-6 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold IX88_15785 43d9d4b28a1281d9fd23794ff6c2e225 237 Gene3D G3DSA:2.40.50.140 4 69 3.5E-10 T 11-10-2018 IX88_15785 43d9d4b28a1281d9fd23794ff6c2e225 237 TIGRFAM TIGR00613 reco: DNA repair protein RecO 9 228 4.9E-14 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 IX88_15785 43d9d4b28a1281d9fd23794ff6c2e225 237 Pfam PF11967 Recombination protein O N terminal 3 41 1.2E-8 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal IX88_15785 43d9d4b28a1281d9fd23794ff6c2e225 237 Pfam PF02565 Recombination protein O C terminal 77 227 3.4E-21 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 IX88_06390 228664ad17980350e610a56459852772 308 Pfam PF01553 Acyltransferase 90 235 4.4E-10 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 IX88_06390 228664ad17980350e610a56459852772 308 SMART SM00563 94 236 4.0E-9 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 IX88_06390 228664ad17980350e610a56459852772 308 SUPERFAMILY SSF69593 79 306 1.83E-29 T 11-10-2018 IX88_07220 7c49eb717908abfeb3449039f9576579 94 Pfam PF05164 Cell division protein ZapA 7 78 1.6E-12 T 11-10-2018 IPR007838 Cell division protein ZapA-like IX88_07220 7c49eb717908abfeb3449039f9576579 94 SUPERFAMILY SSF102829 7 89 8.63E-15 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily IX88_07220 7c49eb717908abfeb3449039f9576579 94 Gene3D G3DSA:1.10.20.30 1 46 3.4E-7 T 11-10-2018 IX88_11475 39f549241e7857c39a5b63fc1a60b576 161 SUPERFAMILY SSF54427 3 161 2.31E-37 T 11-10-2018 IPR032710 NTF2-like domain superfamily IX88_11475 39f549241e7857c39a5b63fc1a60b576 161 Pfam PF00866 Ring hydroxylating beta subunit 18 151 1.1E-20 T 11-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 IX88_11475 39f549241e7857c39a5b63fc1a60b576 161 Gene3D G3DSA:3.10.450.50 1 161 3.9E-35 T 11-10-2018 IX88_00640 c1cddbd708d2c4e96c8ebffb38157d55 127 SUPERFAMILY SSF55298 1 126 1.73E-44 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 IX88_00640 c1cddbd708d2c4e96c8ebffb38157d55 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 124 7.5E-48 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 IX88_00640 c1cddbd708d2c4e96c8ebffb38157d55 127 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 IX88_00640 c1cddbd708d2c4e96c8ebffb38157d55 127 Pfam PF01042 Endoribonuclease L-PSP 8 124 1.6E-37 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 IX88_00640 c1cddbd708d2c4e96c8ebffb38157d55 127 Gene3D G3DSA:3.30.1330.40 3 126 1.9E-50 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 IX88_12415 63d034e0813208e02c8437ba8e8e0fe1 107 Pfam PF14020 Protein of unknown function (DUF4236) 3 57 3.5E-24 T 11-10-2018 IPR025330 Domain of unknown function DUF4236 IX88_03780 fa02de54cc0bb1fc08eb4b114693a23c 117 Pfam PF07007 Lysozyme inhibitor LprI 28 102 3.3E-4 T 11-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal IX88_11240 c698b86a1d58aa2a13cd78c6cc6d3adb 446 Gene3D G3DSA:1.20.1250.20 4 439 9.4E-66 T 11-10-2018 IX88_11240 c698b86a1d58aa2a13cd78c6cc6d3adb 446 Pfam PF07690 Major Facilitator Superfamily 26 394 2.5E-44 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_11240 c698b86a1d58aa2a13cd78c6cc6d3adb 446 SUPERFAMILY SSF103473 8 434 3.79E-75 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_06030 ec1dbbed52cf8573137204872a95c63b 249 Pfam PF13489 Methyltransferase domain 25 180 5.7E-14 T 11-10-2018 IX88_06030 ec1dbbed52cf8573137204872a95c63b 249 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 3 247 30.053 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 IX88_06030 ec1dbbed52cf8573137204872a95c63b 249 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 11 247 2.5E-68 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 IX88_06030 ec1dbbed52cf8573137204872a95c63b 249 SUPERFAMILY SSF53335 10 182 3.8E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_06030 ec1dbbed52cf8573137204872a95c63b 249 Gene3D G3DSA:3.40.50.150 32 248 1.2E-26 T 11-10-2018 IX88_02605 d9067a8d75eda6cdfffcea88a2124844 356 Pfam PF00534 Glycosyl transferases group 1 178 338 6.5E-37 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 IX88_02605 d9067a8d75eda6cdfffcea88a2124844 356 SUPERFAMILY SSF53756 4 356 5.1E-70 T 11-10-2018 IX88_02605 d9067a8d75eda6cdfffcea88a2124844 356 Gene3D G3DSA:3.40.50.2000 15 353 2.3E-58 T 11-10-2018 IX88_02605 d9067a8d75eda6cdfffcea88a2124844 356 Pfam PF13439 Glycosyltransferase Family 4 15 167 1.3E-8 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 IX88_02605 d9067a8d75eda6cdfffcea88a2124844 356 Gene3D G3DSA:3.40.50.2000 171 343 2.3E-58 T 11-10-2018 IX88_17165 d6ebb56ee456ef845661e280a96f0a73 191 Pfam PF14317 YcxB-like protein 108 182 1.4E-20 T 11-10-2018 IPR025588 YcxB-like protein IX88_06525 4a2d1ed58497dcde0a1cf5c7b94191f4 507 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 493 6.3E-137 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 IX88_06525 4a2d1ed58497dcde0a1cf5c7b94191f4 507 SUPERFAMILY SSF103473 9 499 4.32E-67 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_06525 4a2d1ed58497dcde0a1cf5c7b94191f4 507 Gene3D G3DSA:1.20.1250.20 272 502 1.2E-14 T 11-10-2018 IX88_06525 4a2d1ed58497dcde0a1cf5c7b94191f4 507 Pfam PF07690 Major Facilitator Superfamily 22 416 3.2E-54 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_06525 4a2d1ed58497dcde0a1cf5c7b94191f4 507 Gene3D G3DSA:1.20.1720.10 18 256 5.2E-47 T 11-10-2018 IX88_15485 0ff7968e393de40f39ce0f7b7ca8c9b9 364 Pfam PF00487 Fatty acid desaturase 76 340 1.2E-27 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 IX88_04510 a6cd7fa7d2933edc5982e329ee23324f 79 SUPERFAMILY SSF54928 2 77 1.13E-26 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 IX88_04510 a6cd7fa7d2933edc5982e329ee23324f 79 SMART SM00360 2 75 4.7E-27 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 IX88_04510 a6cd7fa7d2933edc5982e329ee23324f 79 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 71 2.6E-22 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 IX88_04510 a6cd7fa7d2933edc5982e329ee23324f 79 Gene3D G3DSA:3.30.70.330 1 79 2.0E-25 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily IX88_17295 c83545714f5108b1e1f73cf41f6c11f0 118 Pfam PF04343 Protein of unknown function, DUF488 4 112 7.8E-34 T 11-10-2018 IPR007438 Protein of unknown function DUF488 IX88_13970 91a24cf215a19929c88050f5a3715567 750 Gene3D G3DSA:2.160.20.10 224 524 1.0E-81 T 11-10-2018 IPR012334 Pectin lyase fold IX88_13970 91a24cf215a19929c88050f5a3715567 750 SUPERFAMILY SSF51327 13 86 7.72E-6 T 11-10-2018 IPR036730 Phage P22 tailspike-like, N-terminal domain superfamily GO:0009405 IX88_13160 2a4720d627e177d61af8d0b6dda07e03 264 Pfam PF10670 Domain of unknown function (DUF4198) 17 241 3.1E-17 T 11-10-2018 IPR019613 Protein of unknown function DUF4198 IX88_03990 c50b73a0ee5a1dab527750e28ebd7d91 133 SUPERFAMILY SSF89919 2 110 1.44E-31 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily IX88_03990 c50b73a0ee5a1dab527750e28ebd7d91 133 Pfam PF02033 Ribosome-binding factor A 6 114 1.9E-30 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 IX88_03990 c50b73a0ee5a1dab527750e28ebd7d91 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 120 3.7E-25 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 IX88_03990 c50b73a0ee5a1dab527750e28ebd7d91 133 Gene3D G3DSA:3.30.300.20 3 111 2.2E-35 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta IX88_03990 c50b73a0ee5a1dab527750e28ebd7d91 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 104 6.0E-44 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 IX88_03990 c50b73a0ee5a1dab527750e28ebd7d91 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 5 117 25.164 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 IX88_12785 bcba51bb817d023d7b4e286f06d9c265 492 Gene3D G3DSA:1.20.1250.20 256 492 3.4E-13 T 11-10-2018 IX88_12785 bcba51bb817d023d7b4e286f06d9c265 492 SUPERFAMILY SSF103473 3 489 8.63E-61 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_12785 bcba51bb817d023d7b4e286f06d9c265 492 Pfam PF07690 Major Facilitator Superfamily 13 401 6.1E-44 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_12785 bcba51bb817d023d7b4e286f06d9c265 492 Gene3D G3DSA:1.20.1720.10 6 241 3.8E-39 T 11-10-2018 IX88_12785 bcba51bb817d023d7b4e286f06d9c265 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 157 181 9.7E-12 T 11-10-2018 IX88_12785 bcba51bb817d023d7b4e286f06d9c265 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 9.7E-12 T 11-10-2018 IX88_12785 bcba51bb817d023d7b4e286f06d9c265 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 218 236 9.7E-12 T 11-10-2018 IX88_12785 bcba51bb817d023d7b4e286f06d9c265 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 392 411 9.7E-12 T 11-10-2018 IX88_12785 bcba51bb817d023d7b4e286f06d9c265 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 70 92 9.7E-12 T 11-10-2018 IX88_10485 f45ad58628306f1986511c2d7519ea7c 303 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 281 1.1E-56 T 11-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 IX88_13955 76edd7368aec98298f20e5d369f105f9 171 Pfam PF09374 Predicted Peptidoglycan domain 98 160 8.4E-10 T 11-10-2018 IPR018537 Peptidoglycan binding domain IX88_13955 76edd7368aec98298f20e5d369f105f9 171 Gene3D G3DSA:1.20.141.10 1 171 2.7E-55 T 11-10-2018 IX88_13955 76edd7368aec98298f20e5d369f105f9 171 SUPERFAMILY SSF53955 1 166 2.02E-46 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily IX88_13955 76edd7368aec98298f20e5d369f105f9 171 Pfam PF05838 Glycosyl hydrolase 108 8 95 6.1E-20 T 11-10-2018 IPR008565 Protein of unknown function DUF847 IX88_12760 be849ef7ff20d26cdf929302785f4a08 742 Pfam PF04185 Phosphoesterase family 46 476 1.4E-102 T 11-10-2018 IPR007312 Phosphoesterase GO:0016788 IX88_12760 be849ef7ff20d26cdf929302785f4a08 742 Gene3D G3DSA:3.40.720.10 307 525 3.1E-49 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 IX88_12760 be849ef7ff20d26cdf929302785f4a08 742 Gene3D G3DSA:3.40.720.10 35 208 2.4E-30 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 IX88_12760 be849ef7ff20d26cdf929302785f4a08 742 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 3 741 1.8E-285 T 11-10-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 IX88_12760 be849ef7ff20d26cdf929302785f4a08 742 Pfam PF05506 Domain of unknown function (DUF756) 548 635 1.1E-23 T 11-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 IX88_12760 be849ef7ff20d26cdf929302785f4a08 742 Pfam PF05506 Domain of unknown function (DUF756) 646 728 2.8E-20 T 11-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 IX88_02850 e5d4b2ebdf482817565e728adad977ed 183 Pfam PF00765 Autoinducer synthase 18 181 1.1E-26 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 IX88_02850 e5d4b2ebdf482817565e728adad977ed 183 SUPERFAMILY SSF55729 19 183 5.33E-37 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_02850 e5d4b2ebdf482817565e728adad977ed 183 Gene3D G3DSA:3.40.630.30 3 183 6.9E-49 T 11-10-2018 IX88_02850 e5d4b2ebdf482817565e728adad977ed 183 PRINTS PR01549 Autoinducer synthesis protein signature 62 80 9.3E-19 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 IX88_02850 e5d4b2ebdf482817565e728adad977ed 183 PRINTS PR01549 Autoinducer synthesis protein signature 18 37 9.3E-19 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 IX88_02850 e5d4b2ebdf482817565e728adad977ed 183 PRINTS PR01549 Autoinducer synthesis protein signature 145 166 9.3E-19 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 IX88_02850 e5d4b2ebdf482817565e728adad977ed 183 PRINTS PR01549 Autoinducer synthesis protein signature 123 144 9.3E-19 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 IX88_02850 e5d4b2ebdf482817565e728adad977ed 183 PRINTS PR01549 Autoinducer synthesis protein signature 38 60 9.3E-19 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 IX88_07585 870cd06bb1e7b8de553c347f5b7ba9fa 292 Pfam PF03180 NLPA lipoprotein 46 281 1.3E-63 T 11-10-2018 IPR004872 Lipoprotein NlpA family IX88_07585 870cd06bb1e7b8de553c347f5b7ba9fa 292 Gene3D G3DSA:3.40.190.10 124 230 2.0E-73 T 11-10-2018 IX88_07585 870cd06bb1e7b8de553c347f5b7ba9fa 292 Gene3D G3DSA:3.40.190.10 46 276 2.0E-73 T 11-10-2018 IX88_07585 870cd06bb1e7b8de553c347f5b7ba9fa 292 SUPERFAMILY SSF53850 41 282 1.49E-64 T 11-10-2018 IX88_16365 934b7ccffc0a5756cdffc20f55e0c49c 251 SUPERFAMILY SSF52540 2 208 1.68E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_14800 56423d3b19ba699d8946274d7b6663ee 144 Gene3D G3DSA:3.90.1720.10 4 143 1.1E-18 T 11-10-2018 IX88_14800 56423d3b19ba699d8946274d7b6663ee 144 Pfam PF00877 NlpC/P60 family 19 133 2.0E-6 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain IX88_14800 56423d3b19ba699d8946274d7b6663ee 144 SUPERFAMILY SSF54001 10 141 4.25E-16 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily IX88_16895 b7421fb7097f5f98ad8f79fa6ea45cc1 338 Gene3D G3DSA:1.10.287.110 146 231 2.4E-5 T 11-10-2018 IPR036869 Chaperone J-domain superfamily IX88_16895 b7421fb7097f5f98ad8f79fa6ea45cc1 338 SUPERFAMILY SSF46565 188 227 5.23E-5 T 11-10-2018 IPR036869 Chaperone J-domain superfamily IX88_15435 b3f034bd290842911d4ce6c72bfc51c1 343 Gene3D G3DSA:3.40.190.10 29 309 2.1E-50 T 11-10-2018 IX88_15435 b3f034bd290842911d4ce6c72bfc51c1 343 SUPERFAMILY SSF53850 28 337 2.61E-60 T 11-10-2018 IX88_15435 b3f034bd290842911d4ce6c72bfc51c1 343 Gene3D G3DSA:3.40.190.10 115 281 2.1E-50 T 11-10-2018 IX88_15435 b3f034bd290842911d4ce6c72bfc51c1 343 Pfam PF12849 PBP superfamily domain 20 307 2.6E-41 T 11-10-2018 IPR024370 PBP domain IX88_14420 33604fadcbb3e6e430ab5c82c8f9e05b 183 Gene3D G3DSA:1.25.40.10 46 183 1.4E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_14420 33604fadcbb3e6e430ab5c82c8f9e05b 183 SUPERFAMILY SSF48452 88 148 3.52E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_04700 31e1a3526dee957b5140376977d2cd05 184 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 104 156 3.6E-9 T 11-10-2018 IPR018637 Domain of unknown function DUF2059 IX88_11145 6235d88f4389a5579108e038f0e97cf9 458 Gene3D G3DSA:1.20.1250.20 4 442 2.2E-76 T 11-10-2018 IX88_11145 6235d88f4389a5579108e038f0e97cf9 458 SUPERFAMILY SSF103473 8 436 6.54E-82 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_11145 6235d88f4389a5579108e038f0e97cf9 458 Pfam PF07690 Major Facilitator Superfamily 26 400 2.3E-48 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_11605 b2e2ac592395c5a60b10256c78f01aa6 137 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 4 124 2.5E-51 T 11-10-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 IX88_11605 b2e2ac592395c5a60b10256c78f01aa6 137 Gene3D G3DSA:1.20.1290.10 4 125 1.1E-41 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 IX88_11605 b2e2ac592395c5a60b10256c78f01aa6 137 SUPERFAMILY SSF69118 3 131 1.83E-38 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 IX88_11605 b2e2ac592395c5a60b10256c78f01aa6 137 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 119 1.5E-24 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 IX88_02290 e7b654ee1db5b93326d86137acc8bd89 416 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 49 382 2.4E-85 T 11-10-2018 IPR010640 Low temperature requirement A IX88_09030 2423202dd1af1981507ecc02a538d7d6 143 Pfam PF03788 LrgA family 29 121 1.1E-22 T 11-10-2018 IPR005538 LrgA/CidA family GO:0016021 IX88_02825 ae01461460ae7f3d71e75745ea00666f 549 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 11-10-2018 IPR020845 AMP-binding, conserved site IX88_02825 ae01461460ae7f3d71e75745ea00666f 549 Gene3D G3DSA:3.40.50.12780 19 439 6.5E-97 T 11-10-2018 IX88_02825 ae01461460ae7f3d71e75745ea00666f 549 SUPERFAMILY SSF56801 27 542 9.68E-139 T 11-10-2018 IX88_02825 ae01461460ae7f3d71e75745ea00666f 549 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 530 1.8E-23 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IX88_02825 ae01461460ae7f3d71e75745ea00666f 549 Pfam PF00501 AMP-binding enzyme 40 443 3.5E-77 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IX88_02825 ae01461460ae7f3d71e75745ea00666f 549 Gene3D G3DSA:3.30.300.30 440 548 1.9E-29 T 11-10-2018 IX88_03300 f91536a2fab58f506ead6a63068ece00 270 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 31 270 3.1E-34 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 IX88_03300 f91536a2fab58f506ead6a63068ece00 270 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 5 270 4.2E-38 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 IX88_08600 4396b427fe9e1f73d61d45fec86fecad 397 SUPERFAMILY SSF89796 4 396 2.62E-122 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily IX88_08600 4396b427fe9e1f73d61d45fec86fecad 397 Pfam PF02515 CoA-transferase family III 5 373 1.0E-114 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 IX88_08600 4396b427fe9e1f73d61d45fec86fecad 397 Gene3D G3DSA:3.30.1540.10 227 325 3.1E-123 T 11-10-2018 IX88_08600 4396b427fe9e1f73d61d45fec86fecad 397 Gene3D G3DSA:3.40.50.10540 5 390 3.1E-123 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily IX88_02270 528f2388f56141cef64ac9c294a4d64c 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 3.5E-126 T 11-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain IX88_02270 528f2388f56141cef64ac9c294a4d64c 386 SUPERFAMILY SSF56059 6 383 9.53E-76 T 11-10-2018 IX88_02270 528f2388f56141cef64ac9c294a4d64c 386 Gene3D G3DSA:3.30.1490.330 258 342 2.2E-18 T 11-10-2018 IX88_02270 528f2388f56141cef64ac9c294a4d64c 386 SUPERFAMILY SSF52440 173 274 3.16E-31 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily IX88_15985 19323f9bb1744ae72afd8a767b824442 150 TIGRFAM TIGR02801 tolR: protein TolR 17 147 5.0E-44 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 IX88_15985 19323f9bb1744ae72afd8a767b824442 150 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 148 1.8E-29 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 IX88_15985 19323f9bb1744ae72afd8a767b824442 150 Gene3D G3DSA:3.30.420.270 65 144 1.2E-12 T 11-10-2018 IX88_15985 19323f9bb1744ae72afd8a767b824442 150 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 10 147 27.65 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 IX88_08385 82f377c1873d906017e9f993aab581de 191 Gene3D G3DSA:3.40.630.30 42 175 1.9E-15 T 11-10-2018 IX88_08385 82f377c1873d906017e9f993aab581de 191 Pfam PF13673 Acetyltransferase (GNAT) domain 73 170 2.5E-11 T 11-10-2018 IPR000182 GNAT domain IX88_08385 82f377c1873d906017e9f993aab581de 191 SUPERFAMILY SSF55729 19 177 8.68E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_13780 2b29d7243ac8063020165505ac003658 264 Pfam PF02585 GlcNAc-PI de-N-acetylase 48 173 2.6E-22 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 IX88_13780 2b29d7243ac8063020165505ac003658 264 Gene3D G3DSA:3.40.50.10320 40 246 2.8E-36 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 IX88_13780 2b29d7243ac8063020165505ac003658 264 SUPERFAMILY SSF102588 44 256 5.62E-41 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 IX88_06450 da6a16bc85fad3d0092cc24f6c78e9b0 145 Gene3D G3DSA:1.10.10.10 2 84 1.1E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_06450 da6a16bc85fad3d0092cc24f6c78e9b0 145 SUPERFAMILY SSF46785 6 134 1.7E-44 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_06450 da6a16bc85fad3d0092cc24f6c78e9b0 145 Gene3D G3DSA:3.30.1490.190 85 141 7.9E-24 T 11-10-2018 IX88_06450 da6a16bc85fad3d0092cc24f6c78e9b0 145 Pfam PF01475 Ferric uptake regulator family 10 130 1.9E-45 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 IX88_05065 90d62a596e7f9950d2a07c53abe592bb 264 Pfam PF01261 Xylose isomerase-like TIM barrel 21 210 7.7E-27 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain IX88_05065 90d62a596e7f9950d2a07c53abe592bb 264 Gene3D G3DSA:3.20.20.150 1 262 1.1E-66 T 11-10-2018 IX88_05065 90d62a596e7f9950d2a07c53abe592bb 264 SUPERFAMILY SSF51658 1 258 6.5E-69 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily IX88_05065 90d62a596e7f9950d2a07c53abe592bb 264 PIRSF PIRSF006241 1 261 1.1E-93 T 11-10-2018 IPR026040 Hydroxypyruvate isomerase-like IX88_03765 14566c8aca83a14f4319c691faf3f859 290 PRINTS PR00412 Epoxide hydrolase signature 230 246 6.1E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 IX88_03765 14566c8aca83a14f4319c691faf3f859 290 PRINTS PR00412 Epoxide hydrolase signature 33 51 6.1E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 IX88_03765 14566c8aca83a14f4319c691faf3f859 290 PRINTS PR00412 Epoxide hydrolase signature 99 112 6.1E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 IX88_03765 14566c8aca83a14f4319c691faf3f859 290 PRINTS PR00412 Epoxide hydrolase signature 263 285 6.1E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 IX88_03765 14566c8aca83a14f4319c691faf3f859 290 SUPERFAMILY SSF53474 9 288 1.84E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_03765 14566c8aca83a14f4319c691faf3f859 290 Pfam PF00561 alpha/beta hydrolase fold 28 272 1.7E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_03765 14566c8aca83a14f4319c691faf3f859 290 Gene3D G3DSA:3.40.50.1820 5 290 6.0E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_10740 d4a360db2846f948c509ea0c86a65c89 213 Pfam PF00857 Isochorismatase family 32 205 3.7E-38 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 IX88_10740 d4a360db2846f948c509ea0c86a65c89 213 PIRSF PIRSF001111 1 213 1.8E-103 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 IX88_10740 d4a360db2846f948c509ea0c86a65c89 213 Gene3D G3DSA:3.40.50.850 1 211 5.6E-75 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 IX88_10740 d4a360db2846f948c509ea0c86a65c89 213 SUPERFAMILY SSF52499 1 210 5.23E-65 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 IX88_10740 d4a360db2846f948c509ea0c86a65c89 213 PRINTS PR01398 Isochorismatase signature 63 80 4.1E-46 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 IX88_10740 d4a360db2846f948c509ea0c86a65c89 213 PRINTS PR01398 Isochorismatase signature 80 99 4.1E-46 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 IX88_10740 d4a360db2846f948c509ea0c86a65c89 213 PRINTS PR01398 Isochorismatase signature 186 203 4.1E-46 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 IX88_10740 d4a360db2846f948c509ea0c86a65c89 213 PRINTS PR01398 Isochorismatase signature 112 134 4.1E-46 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 IX88_10740 d4a360db2846f948c509ea0c86a65c89 213 PRINTS PR01398 Isochorismatase signature 2 14 4.1E-46 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 IX88_10740 d4a360db2846f948c509ea0c86a65c89 213 PRINTS PR01398 Isochorismatase signature 168 186 4.1E-46 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 IX88_08365 86ba4a720299cecbe39504d48fcf19aa 280 PRINTS PR01438 Universal stress protein signature 240 252 2.4E-8 T 11-10-2018 IPR006015 Universal stress protein A IX88_08365 86ba4a720299cecbe39504d48fcf19aa 280 PRINTS PR01438 Universal stress protein signature 1 11 2.4E-8 T 11-10-2018 IPR006015 Universal stress protein A IX88_08365 86ba4a720299cecbe39504d48fcf19aa 280 PRINTS PR01438 Universal stress protein signature 258 280 2.4E-8 T 11-10-2018 IPR006015 Universal stress protein A IX88_08365 86ba4a720299cecbe39504d48fcf19aa 280 SUPERFAMILY SSF52402 166 280 2.09E-19 T 11-10-2018 IX88_08365 86ba4a720299cecbe39504d48fcf19aa 280 Gene3D G3DSA:3.40.50.12370 2 280 1.1E-46 T 11-10-2018 IX88_08365 86ba4a720299cecbe39504d48fcf19aa 280 Pfam PF00582 Universal stress protein family 213 280 1.1E-10 T 11-10-2018 IPR006016 UspA IX88_08365 86ba4a720299cecbe39504d48fcf19aa 280 Pfam PF00582 Universal stress protein family 2 156 1.4E-5 T 11-10-2018 IPR006016 UspA IX88_08365 86ba4a720299cecbe39504d48fcf19aa 280 SUPERFAMILY SSF52402 1 157 1.59E-11 T 11-10-2018 IX88_15245 462b94616f9beca98ed1d54d43d44b11 615 SUPERFAMILY SSF56801 19 518 2.88E-117 T 11-10-2018 IX88_15245 462b94616f9beca98ed1d54d43d44b11 615 Pfam PF13193 AMP-binding enzyme C-terminal domain 426 505 3.9E-9 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain IX88_15245 462b94616f9beca98ed1d54d43d44b11 615 Gene3D G3DSA:3.40.50.12780 23 410 4.5E-88 T 11-10-2018 IX88_15245 462b94616f9beca98ed1d54d43d44b11 615 Gene3D G3DSA:3.30.300.30 414 541 7.4E-24 T 11-10-2018 IX88_15245 462b94616f9beca98ed1d54d43d44b11 615 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 11-10-2018 IPR020845 AMP-binding, conserved site IX88_15245 462b94616f9beca98ed1d54d43d44b11 615 Pfam PF00501 AMP-binding enzyme 33 417 2.7E-71 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 IX88_05470 9e95fbe8a3300f7c4da0e7c3dd4956b0 90 Gene3D G3DSA:3.30.310.50 1 90 6.1E-22 T 11-10-2018 IX88_05470 9e95fbe8a3300f7c4da0e7c3dd4956b0 90 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 6 88 2.1E-17 T 11-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 IX88_16805 817fd71b5893b9d62268c811e2e56590 262 Gene3D G3DSA:3.90.640.20 169 257 2.7E-17 T 11-10-2018 IPR037126 PdaC/RsiV-like superfamily IX88_16805 817fd71b5893b9d62268c811e2e56590 262 Gene3D G3DSA:3.30.565.40 52 168 6.4E-13 T 11-10-2018 IX88_16805 817fd71b5893b9d62268c811e2e56590 262 Pfam PF11738 Protein of unknown function (DUF3298) 174 242 1.7E-9 T 11-10-2018 IPR021729 Domain of unknown function DUF3298 IX88_15935 3404c3240b02628b31006af0438a49d7 105 Gene3D G3DSA:3.30.70.120 1 104 3.7E-41 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal IX88_15935 3404c3240b02628b31006af0438a49d7 105 SUPERFAMILY SSF102705 2 100 2.43E-23 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily IX88_17770 428202dca62e3d21e4dad16c0710da01 235 SUPERFAMILY SSF47781 17 91 5.93E-11 T 11-10-2018 IPR010994 RuvA domain 2-like IX88_17770 428202dca62e3d21e4dad16c0710da01 235 SUPERFAMILY SSF102712 155 197 8.11E-5 T 11-10-2018 IX88_17770 428202dca62e3d21e4dad16c0710da01 235 Pfam PF04002 RadC-like JAB domain 107 225 3.0E-36 T 11-10-2018 IPR025657 RadC-like JAB domain IX88_17770 428202dca62e3d21e4dad16c0710da01 235 Gene3D G3DSA:3.40.140.10 103 227 9.0E-37 T 11-10-2018 IX88_17770 428202dca62e3d21e4dad16c0710da01 235 Gene3D G3DSA:1.10.150.20 46 88 1.2E-6 T 11-10-2018 IX88_17770 428202dca62e3d21e4dad16c0710da01 235 TIGRFAM TIGR00608 radc: DNA repair protein RadC 13 227 7.5E-63 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 IX88_05140 e964c640c375250cfdff7d5916807c7e 283 Pfam PF03668 P-loop ATPase protein family 4 280 4.2E-86 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 IX88_05140 e964c640c375250cfdff7d5916807c7e 283 Gene3D G3DSA:3.40.50.300 1 159 2.6E-5 T 11-10-2018 IX88_05140 e964c640c375250cfdff7d5916807c7e 283 PIRSF PIRSF005052 2 283 6.2E-111 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 IX88_05140 e964c640c375250cfdff7d5916807c7e 283 SUPERFAMILY SSF52540 3 157 6.82E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_05140 e964c640c375250cfdff7d5916807c7e 283 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 2 281 38.305 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 IX88_04795 14c861013de04159965cedffc6dabd06 410 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 29 387 76.858 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 IX88_04795 14c861013de04159965cedffc6dabd06 410 Gene3D G3DSA:3.20.20.70 91 372 1.4E-108 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_04795 14c861013de04159965cedffc6dabd06 410 SUPERFAMILY SSF102114 135 355 1.15E-16 T 11-10-2018 IX88_04795 14c861013de04159965cedffc6dabd06 410 Gene3D G3DSA:1.10.150.530 29 90 3.5E-26 T 11-10-2018 IX88_04795 14c861013de04159965cedffc6dabd06 410 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 28 392 2.1E-144 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 IX88_04795 14c861013de04159965cedffc6dabd06 410 PIRSF PIRSF006004 21 401 2.9E-148 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 IX88_04795 14c861013de04159965cedffc6dabd06 410 Pfam PF04055 Radical SAM superfamily 139 312 3.9E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 IX88_02300 1594155cb70482db6dd97644ced738c3 121 Pfam PF04342 Putative member of DMT superfamily (DUF486) 14 118 8.8E-39 T 11-10-2018 IPR007437 Protein of unknown function DUF486 IX88_02300 1594155cb70482db6dd97644ced738c3 121 PIRSF PIRSF021239 7 121 5.6E-47 T 11-10-2018 IPR007437 Protein of unknown function DUF486 IX88_13750 27690a7c5ba7ce99d3ba4699729b0d71 201 Pfam PF01810 LysE type translocator 13 190 2.9E-14 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_09525 441deab7cef4832ce49ffda9be97eb28 339 Gene3D G3DSA:2.60.40.1090 193 339 6.3E-25 T 11-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 IX88_09525 441deab7cef4832ce49ffda9be97eb28 339 Gene3D G3DSA:2.60.40.3310 23 192 8.6E-46 T 11-10-2018 IX88_09525 441deab7cef4832ce49ffda9be97eb28 339 SUPERFAMILY SSF49401 191 339 1.79E-20 T 11-10-2018 IPR008966 Adhesion domain superfamily IX88_09525 441deab7cef4832ce49ffda9be97eb28 339 Pfam PF00419 Fimbrial protein 185 338 6.2E-19 T 11-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 IX88_16625 3cb31191aa8399527342ed1bd200402f 113 SUPERFAMILY SSF46767 15 98 4.58E-24 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 IX88_16625 3cb31191aa8399527342ed1bd200402f 113 Gene3D G3DSA:1.10.10.10 13 113 4.0E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_16625 3cb31191aa8399527342ed1bd200402f 113 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 16 97 6.3E-24 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 IX88_17380 bdc1292e35db7f94547821ca153429da 401 Pfam PF01139 tRNA-splicing ligase RtcB 31 401 1.2E-132 T 11-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 IX88_17380 bdc1292e35db7f94547821ca153429da 401 SUPERFAMILY SSF103365 15 401 1.01E-132 T 11-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 IX88_17380 bdc1292e35db7f94547821ca153429da 401 Gene3D G3DSA:3.90.1860.10 3 401 1.8E-118 T 11-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 IX88_16975 78ead1aecbebb9bafc0b594742e31b35 303 Gene3D G3DSA:1.10.600.10 6 300 1.7E-88 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily IX88_16975 78ead1aecbebb9bafc0b594742e31b35 303 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 222 234 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site IX88_16975 78ead1aecbebb9bafc0b594742e31b35 303 SUPERFAMILY SSF48576 11 289 1.54E-77 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily IX88_16975 78ead1aecbebb9bafc0b594742e31b35 303 Pfam PF00348 Polyprenyl synthetase 36 274 4.8E-57 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 IX88_11265 1c7e32ada65683ab195579de09d20846 579 Pfam PF08479 POTRA domain, ShlB-type 97 158 4.9E-12 T 11-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type IX88_11265 1c7e32ada65683ab195579de09d20846 579 Gene3D G3DSA:2.40.160.50 203 579 4.7E-89 T 11-10-2018 IX88_11265 1c7e32ada65683ab195579de09d20846 579 PIRSF PIRSF029745 4 579 8.3E-146 T 11-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 IX88_11265 1c7e32ada65683ab195579de09d20846 579 Pfam PF17287 POTRA domain 164 214 1.5E-9 T 11-10-2018 IPR035251 ShlB, POTRA domain IX88_11265 1c7e32ada65683ab195579de09d20846 579 Gene3D G3DSA:3.10.20.310 62 161 3.9E-5 T 11-10-2018 IX88_11265 1c7e32ada65683ab195579de09d20846 579 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 224 543 3.1E-95 T 11-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal IX88_05905 87bff171e0bfd74bc79b6547efbe90bc 188 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 24 176 3.1E-29 T 11-10-2018 IPR018639 Domain of unknown function DUF2062 IX88_13525 72275ad95a50c2437f768417f3c1a07a 188 Gene3D G3DSA:1.10.357.10 61 186 1.8E-9 T 11-10-2018 IX88_13525 72275ad95a50c2437f768417f3c1a07a 188 Gene3D G3DSA:1.10.10.60 11 58 1.5E-12 T 11-10-2018 IX88_13525 72275ad95a50c2437f768417f3c1a07a 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 38 65 1.1E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_13525 72275ad95a50c2437f768417f3c1a07a 188 SUPERFAMILY SSF46689 13 70 5.49E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_13525 72275ad95a50c2437f768417f3c1a07a 188 Pfam PF16859 Bacterial transcriptional repressor C-terminal 79 181 9.2E-9 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal IX88_13525 72275ad95a50c2437f768417f3c1a07a 188 SUPERFAMILY SSF48498 82 184 1.49E-10 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_14335 313b2eaef8c51d8b43f027f4c3d5a4c1 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 2.2E-18 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis IX88_14335 313b2eaef8c51d8b43f027f4c3d5a4c1 65 Pfam PF02597 ThiS family 8 65 1.2E-10 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 IX88_14335 313b2eaef8c51d8b43f027f4c3d5a4c1 65 Gene3D G3DSA:3.10.20.30 1 65 9.2E-20 T 11-10-2018 IPR012675 Beta-grasp domain superfamily IX88_14335 313b2eaef8c51d8b43f027f4c3d5a4c1 65 SUPERFAMILY SSF54285 2 64 1.05E-16 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp IX88_17150 9aa2c0b4257a14626fbeeb89dbf3ced7 234 Pfam PF00881 Nitroreductase family 13 209 2.5E-36 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 IX88_17150 9aa2c0b4257a14626fbeeb89dbf3ced7 234 Gene3D G3DSA:3.40.109.10 2 230 1.8E-66 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IX88_17150 9aa2c0b4257a14626fbeeb89dbf3ced7 234 SUPERFAMILY SSF55469 9 232 6.54E-47 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 IX88_12810 0cf610d8adc3e933b885f1807ecef4b9 522 Gene3D G3DSA:3.40.47.10 91 522 1.1E-100 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_12810 0cf610d8adc3e933b885f1807ecef4b9 522 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 104 521 9.8E-114 T 11-10-2018 IPR002155 Thiolase GO:0016747 IX88_12810 0cf610d8adc3e933b885f1807ecef4b9 522 SUPERFAMILY SSF53901 102 375 6.29E-58 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_12810 0cf610d8adc3e933b885f1807ecef4b9 522 Pfam PF02803 Thiolase, C-terminal domain 396 522 2.0E-28 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 IX88_12810 0cf610d8adc3e933b885f1807ecef4b9 522 SUPERFAMILY SSF53901 398 521 1.83E-26 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 IX88_12810 0cf610d8adc3e933b885f1807ecef4b9 522 Pfam PF00108 Thiolase, N-terminal domain 102 369 1.5E-47 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 IX88_09110 32a3919427ae78e43bcd38fefcabe6ee 254 Pfam PF03818 Malonate/sodium symporter MadM subunit 4 61 1.5E-24 T 11-10-2018 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal IX88_09110 32a3919427ae78e43bcd38fefcabe6ee 254 TIGRFAM TIGR00808 malonate_madM: malonate transporter, MadM subunit 1 254 2.1E-126 T 11-10-2018 IPR004691 Malonate/sodium symporter MadM subunit GO:0044668 IX88_08410 9716c0c74bb564ba35473ec19623c126 310 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 301 2.7E-57 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 IX88_08410 9716c0c74bb564ba35473ec19623c126 310 PIRSF PIRSF026649 9 310 2.7E-80 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 IX88_08410 9716c0c74bb564ba35473ec19623c126 310 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 10 310 39.528 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 IX88_03180 b0786fe2e69cab8a25829497a033c33c 180 SUPERFAMILY SSF55729 1 128 1.18E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_03180 b0786fe2e69cab8a25829497a033c33c 180 Gene3D G3DSA:3.40.630.30 1 180 1.0E-43 T 11-10-2018 IX88_03180 b0786fe2e69cab8a25829497a033c33c 180 Pfam PF13527 Acetyltransferase (GNAT) domain 8 127 4.9E-17 T 11-10-2018 IX88_07720 ddcda96c33e30f1e74f42ae97aa6f619 487 Pfam PF00324 Amino acid permease 36 473 3.8E-102 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 IX88_07720 ddcda96c33e30f1e74f42ae97aa6f619 487 PIRSF PIRSF006060 16 485 1.7E-67 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_07720 ddcda96c33e30f1e74f42ae97aa6f619 487 Gene3D G3DSA:1.20.1740.10 26 485 2.1E-62 T 11-10-2018 IX88_06970 c8984954431a1e0448d076b17e9c21b3 196 Pfam PF05036 Sporulation related domain 115 173 3.9E-6 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 IX88_06970 c8984954431a1e0448d076b17e9c21b3 196 SUPERFAMILY SSF110997 114 187 2.62E-10 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 IX88_06490 ec945eedec83c1674ca10b5ede314179 125 Gene3D G3DSA:3.10.180.10 3 121 1.2E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IX88_06490 ec945eedec83c1674ca10b5ede314179 125 SUPERFAMILY SSF54593 3 121 8.53E-16 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IX88_04185 0095fde7f584df72e8ccf05fa4ee9132 203 Gene3D G3DSA:3.10.540.10 16 106 9.6E-32 T 11-10-2018 IX88_04185 0095fde7f584df72e8ccf05fa4ee9132 203 Gene3D G3DSA:2.30.270.10 107 174 4.4E-14 T 11-10-2018 IPR023361 DUF1285, beta-roll domain superfamily IX88_04185 0095fde7f584df72e8ccf05fa4ee9132 203 PIRSF PIRSF029557 11 200 4.3E-41 T 11-10-2018 IPR010707 Protein of unknown function DUF1285 IX88_04185 0095fde7f584df72e8ccf05fa4ee9132 203 Pfam PF06938 Protein of unknown function (DUF1285) 56 196 1.7E-45 T 11-10-2018 IPR010707 Protein of unknown function DUF1285 IX88_11765 5cfc7336371b9987acb6e34f4a9bbcc6 445 Pfam PF02386 Cation transport protein 40 428 4.2E-57 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 IX88_11765 5cfc7336371b9987acb6e34f4a9bbcc6 445 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 33 417 1.2E-100 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 IX88_11875 8975242db5f055a05d3dd925d5e4f55b 113 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 10 105 4.7E-44 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related IX88_11875 8975242db5f055a05d3dd925d5e4f55b 113 SUPERFAMILY SSF52833 7 108 2.5E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_11875 8975242db5f055a05d3dd925d5e4f55b 113 Gene3D G3DSA:3.40.30.10 6 109 4.8E-31 T 11-10-2018 IX88_11875 8975242db5f055a05d3dd925d5e4f55b 113 Pfam PF00462 Glutaredoxin 21 85 4.5E-18 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 IX88_11875 8975242db5f055a05d3dd925d5e4f55b 113 PIRSF PIRSF005894 2 112 4.1E-47 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 IX88_05050 94e35b48ffd3cbcc844b13183c68ba91 484 PIRSF PIRSF000204 3 481 6.9E-189 T 11-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 IX88_05050 94e35b48ffd3cbcc844b13183c68ba91 484 Pfam PF02233 NAD(P) transhydrogenase beta subunit 10 477 9.8E-182 T 11-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 IX88_05050 94e35b48ffd3cbcc844b13183c68ba91 484 Gene3D G3DSA:3.40.50.1220 301 480 1.2E-81 T 11-10-2018 IX88_05050 94e35b48ffd3cbcc844b13183c68ba91 484 SUPERFAMILY SSF52467 308 480 6.21E-74 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily IX88_12400 c38b7d2efd278940d55b59839dc9a4a5 1329 SUPERFAMILY SSF53955 720 835 1.41E-23 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily IX88_12400 c38b7d2efd278940d55b59839dc9a4a5 1329 Pfam PF01464 Transglycosylase SLT domain 725 820 4.2E-14 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 IX88_12400 c38b7d2efd278940d55b59839dc9a4a5 1329 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 138 211 1.4E-24 T 11-10-2018 IPR013491 Caudovirus, tape measure, N-terminal IX88_12400 c38b7d2efd278940d55b59839dc9a4a5 1329 Gene3D G3DSA:1.10.530.10 720 854 3.9E-21 T 11-10-2018 IX88_03560 4c4b6c797db79801fa8da57b0a033552 108 SUPERFAMILY SSF81273 66 108 4.71E-12 T 11-10-2018 IX88_03560 4c4b6c797db79801fa8da57b0a033552 108 SMART SM00528 63 108 1.0E-15 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 IX88_03560 4c4b6c797db79801fa8da57b0a033552 108 Gene3D G3DSA:4.10.430.10 58 108 9.2E-19 T 11-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 IX88_03560 4c4b6c797db79801fa8da57b0a033552 108 Pfam PF00816 H-NS histone family 12 101 4.0E-22 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 IX88_05985 04f1a5ea0b8f06585fa3f4888be4437a 345 SMART SM00771 204 335 2.2E-49 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 IX88_05985 04f1a5ea0b8f06585fa3f4888be4437a 345 Gene3D G3DSA:3.30.1400.10 202 343 4.0E-35 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 IX88_05985 04f1a5ea0b8f06585fa3f4888be4437a 345 SUPERFAMILY SSF64383 205 339 1.57E-32 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 IX88_05985 04f1a5ea0b8f06585fa3f4888be4437a 345 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 206 333 4.6E-31 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 IX88_05985 04f1a5ea0b8f06585fa3f4888be4437a 345 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 220 343 3.0E-61 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 IX88_12640 960365bba91a1807bf8765dee27a78af 218 Gene3D G3DSA:1.10.260.40 1 67 5.3E-21 T 11-10-2018 IX88_12640 960365bba91a1807bf8765dee27a78af 218 Pfam PF00717 Peptidase S24-like 122 188 3.1E-11 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C IX88_12640 960365bba91a1807bf8765dee27a78af 218 SUPERFAMILY SSF47413 2 62 6.97E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 IX88_12640 960365bba91a1807bf8765dee27a78af 218 SMART SM00530 7 61 1.1E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IX88_12640 960365bba91a1807bf8765dee27a78af 218 Pfam PF01381 Helix-turn-helix 8 61 1.4E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 IX88_12640 960365bba91a1807bf8765dee27a78af 218 Gene3D G3DSA:2.10.109.10 77 204 2.1E-31 T 11-10-2018 IX88_12640 960365bba91a1807bf8765dee27a78af 218 SUPERFAMILY SSF51306 82 205 3.66E-21 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily IX88_06770 1d766559bd704129c54c1cafa77c4821 173 Pfam PF07883 Cupin domain 79 148 2.4E-11 T 11-10-2018 IPR013096 Cupin 2, conserved barrel IX88_06770 1d766559bd704129c54c1cafa77c4821 173 SUPERFAMILY SSF51182 44 167 6.54E-23 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily IX88_06770 1d766559bd704129c54c1cafa77c4821 173 Gene3D G3DSA:2.60.120.10 41 173 6.5E-20 T 11-10-2018 IPR014710 RmlC-like jelly roll fold IX88_13935 5dd3669e2c9c1de06061e56b18289c16 334 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 77 96 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 IX88_13935 5dd3669e2c9c1de06061e56b18289c16 334 Pfam PF01180 Dihydroorotate dehydrogenase 44 331 4.5E-86 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 IX88_13935 5dd3669e2c9c1de06061e56b18289c16 334 SUPERFAMILY SSF51395 1 332 5.5E-103 T 11-10-2018 IX88_13935 5dd3669e2c9c1de06061e56b18289c16 334 Gene3D G3DSA:3.20.20.70 2 332 3.6E-129 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_13935 5dd3669e2c9c1de06061e56b18289c16 334 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 332 2.8E-126 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 IX88_13935 5dd3669e2c9c1de06061e56b18289c16 334 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 289 309 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 IX88_13935 5dd3669e2c9c1de06061e56b18289c16 334 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 333 50.631 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 IX88_13935 5dd3669e2c9c1de06061e56b18289c16 334 PIRSF PIRSF000164 13 334 4.0E-93 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 IX88_12710 f91423889a0d670464866a0c9ba3754e 190 SUPERFAMILY SSF48498 78 165 1.16E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IX88_12710 f91423889a0d670464866a0c9ba3754e 190 SUPERFAMILY SSF46689 3 69 1.9E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_12710 f91423889a0d670464866a0c9ba3754e 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.5E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_12710 f91423889a0d670464866a0c9ba3754e 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.5E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_12710 f91423889a0d670464866a0c9ba3754e 190 Gene3D G3DSA:1.10.357.10 1 185 1.3E-35 T 11-10-2018 IX88_12710 f91423889a0d670464866a0c9ba3754e 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 6.5E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_09965 e828b4474a024609d3d98a9503e878ba 670 Gene3D G3DSA:1.10.1370.40 65 661 2.6E-169 T 11-10-2018 IX88_09965 e828b4474a024609d3d98a9503e878ba 670 Pfam PF01432 Peptidase family M3 229 663 1.9E-106 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 IX88_09965 e828b4474a024609d3d98a9503e878ba 670 SUPERFAMILY SSF55486 34 662 9.59E-140 T 11-10-2018 IX88_09965 e828b4474a024609d3d98a9503e878ba 670 Gene3D G3DSA:1.10.1370.10 153 599 2.6E-169 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 IX88_11530 2cb13581342b8f15a6569b56f6238177 232 SMART SM00855 3 176 2.8E-10 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 IX88_11530 2cb13581342b8f15a6569b56f6238177 232 PIRSF PIRSF000709 1 74 5.1E-4 T 11-10-2018 IX88_11530 2cb13581342b8f15a6569b56f6238177 232 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 83 1.4E-8 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 IX88_11530 2cb13581342b8f15a6569b56f6238177 232 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 116 217 9.3E-10 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 IX88_11530 2cb13581342b8f15a6569b56f6238177 232 SUPERFAMILY SSF53254 1 222 5.11E-33 T 11-10-2018 IPR029033 Histidine phosphatase superfamily IX88_11530 2cb13581342b8f15a6569b56f6238177 232 Gene3D G3DSA:3.40.50.1240 1 227 7.2E-31 T 11-10-2018 IPR029033 Histidine phosphatase superfamily IX88_16635 09e1aa94c41216b26dbe81044329dd8e 574 SUPERFAMILY SSF56300 263 494 1.66E-25 T 11-10-2018 IX88_16635 09e1aa94c41216b26dbe81044329dd8e 574 Gene3D G3DSA:3.40.710.10 33 126 5.6E-7 T 11-10-2018 IX88_16635 09e1aa94c41216b26dbe81044329dd8e 574 SMART SM00854 239 494 1.8E-52 T 11-10-2018 IPR019079 Capsule synthesis protein, CapA IX88_16635 09e1aa94c41216b26dbe81044329dd8e 574 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 242 493 1.8E-42 T 11-10-2018 IPR019079 Capsule synthesis protein, CapA IX88_04005 fe2909a459fb8b37a2e10bb62a81afff 175 PIRSF PIRSF019239 7 170 1.2E-48 T 11-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 IX88_04005 fe2909a459fb8b37a2e10bb62a81afff 175 Pfam PF01899 Na+/H+ ion antiporter subunit 18 164 1.1E-36 T 11-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 IX88_11710 4706dfcbc4dfd2ecf0c7b18baedba389 351 Pfam PF00793 DAHP synthetase I family 43 334 1.0E-82 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 IX88_11710 4706dfcbc4dfd2ecf0c7b18baedba389 351 PIRSF PIRSF001361 3 348 3.6E-137 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 IX88_11710 4706dfcbc4dfd2ecf0c7b18baedba389 351 SUPERFAMILY SSF51569 15 343 1.26E-114 T 11-10-2018 IX88_11710 4706dfcbc4dfd2ecf0c7b18baedba389 351 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 16 344 1.1E-126 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 IX88_11710 4706dfcbc4dfd2ecf0c7b18baedba389 351 Gene3D G3DSA:3.20.20.70 10 346 1.1E-134 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_12890 ad96dbc4b732d9e28a5d00c1b2fbafd5 370 SUPERFAMILY SSF56925 128 370 2.04E-17 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IX88_12890 ad96dbc4b732d9e28a5d00c1b2fbafd5 370 Pfam PF03922 OmpW family 121 370 7.3E-17 T 11-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 IX88_03015 23e5e9d016a4195459e76535211c404c 269 Pfam PF00950 ABC 3 transport family 6 259 1.4E-52 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 IX88_03015 23e5e9d016a4195459e76535211c404c 269 SUPERFAMILY SSF81345 4 256 2.35E-32 T 11-10-2018 IPR037294 ABC transporter, BtuC-like IX88_03015 23e5e9d016a4195459e76535211c404c 269 Gene3D G3DSA:1.10.3470.10 34 268 1.8E-7 T 11-10-2018 IPR037294 ABC transporter, BtuC-like IX88_10000 190e88f70085ab22563b4d218191a92f 244 Gene3D G3DSA:3.40.50.1240 26 225 5.6E-11 T 11-10-2018 IPR029033 Histidine phosphatase superfamily IX88_10000 190e88f70085ab22563b4d218191a92f 244 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 27 96 4.4E-7 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 IX88_10000 190e88f70085ab22563b4d218191a92f 244 SUPERFAMILY SSF53254 27 196 1.13E-14 T 11-10-2018 IPR029033 Histidine phosphatase superfamily IX88_09775 033db51cf5c4de89c9d708a82cbd20cd 260 Gene3D G3DSA:3.40.50.300 1 259 4.6E-81 T 11-10-2018 IX88_09775 033db51cf5c4de89c9d708a82cbd20cd 260 SUPERFAMILY SSF52540 1 252 3.65E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_09775 033db51cf5c4de89c9d708a82cbd20cd 260 PIRSF PIRSF009320 2 84 2.2E-15 T 11-10-2018 IX88_09775 033db51cf5c4de89c9d708a82cbd20cd 260 PIRSF PIRSF009320 85 259 2.1E-9 T 11-10-2018 IX88_09775 033db51cf5c4de89c9d708a82cbd20cd 260 Pfam PF13614 AAA domain 3 177 3.4E-61 T 11-10-2018 IPR025669 AAA domain IX88_04445 f6b3b3322766aaa8b19ad81540393b1d 366 Pfam PF00534 Glycosyl transferases group 1 187 339 1.2E-27 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 IX88_04445 f6b3b3322766aaa8b19ad81540393b1d 366 SUPERFAMILY SSF53756 7 365 8.79E-66 T 11-10-2018 IX88_04445 f6b3b3322766aaa8b19ad81540393b1d 366 Pfam PF13439 Glycosyltransferase Family 4 13 165 1.9E-26 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 IX88_04445 f6b3b3322766aaa8b19ad81540393b1d 366 Gene3D G3DSA:3.40.50.2000 21 361 1.1E-57 T 11-10-2018 IX88_04445 f6b3b3322766aaa8b19ad81540393b1d 366 Gene3D G3DSA:3.40.50.2000 163 348 1.1E-57 T 11-10-2018 IX88_13430 202befcf2b60f058d60c541ccd94f9ad 244 Pfam PF00227 Proteasome subunit 4 173 2.6E-7 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 IX88_13430 202befcf2b60f058d60c541ccd94f9ad 244 PIRSF PIRSF009120 1 243 7.4E-106 T 11-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 IX88_13430 202befcf2b60f058d60c541ccd94f9ad 244 SUPERFAMILY SSF56235 2 238 2.72E-34 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IX88_13430 202befcf2b60f058d60c541ccd94f9ad 244 Gene3D G3DSA:3.60.20.10 2 235 4.4E-25 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal IX88_07290 4914f273a3c53b72b1d37f656325a8ac 235 Pfam PF04972 BON domain 124 186 0.0067 T 11-10-2018 IPR007055 BON domain IX88_07290 4914f273a3c53b72b1d37f656325a8ac 235 Pfam PF04972 BON domain 60 113 4.6E-11 T 11-10-2018 IPR007055 BON domain IX88_03190 986fb41cfdd8f4b3aeb77e5e11cd437a 162 Pfam PF01464 Transglycosylase SLT domain 42 146 3.5E-20 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 IX88_03190 986fb41cfdd8f4b3aeb77e5e11cd437a 162 Gene3D G3DSA:1.10.530.10 26 159 7.3E-29 T 11-10-2018 IX88_03190 986fb41cfdd8f4b3aeb77e5e11cd437a 162 SUPERFAMILY SSF53955 26 158 8.73E-33 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily IX88_14590 cc5e06ed814ceb2a05e194609e972e4c 195 Pfam PF03591 AzlC protein 2 122 5.4E-28 T 11-10-2018 IPR011606 Branched-chain amino acid transport, permease IX88_08880 aebfd101098fd72fa9ccebca1cdb5822 159 Pfam PF02464 Competence-damaged protein 4 125 5.3E-21 T 11-10-2018 IPR008136 CinA, C-terminal IX88_08880 aebfd101098fd72fa9ccebca1cdb5822 159 Gene3D G3DSA:3.90.950.20 1 143 2.5E-25 T 11-10-2018 IPR036653 CinA-like, C-terminal IX88_08880 aebfd101098fd72fa9ccebca1cdb5822 159 SUPERFAMILY SSF142433 3 130 4.32E-28 T 11-10-2018 IPR036653 CinA-like, C-terminal IX88_15530 6e5b357bd1c92c73ad09fecaf5a4bd7b 125 Pfam PF06127 Protein of unknown function (DUF962) 20 112 1.3E-30 T 11-10-2018 IPR009305 Protein of unknown function DUF962 IX88_03255 c17a9a518647bf7599dddee35c522000 155 SUPERFAMILY SSF54427 26 129 9.64E-34 T 11-10-2018 IPR032710 NTF2-like domain superfamily IX88_03255 c17a9a518647bf7599dddee35c522000 155 Pfam PF02810 SEC-C motif 135 152 2.4E-8 T 11-10-2018 IPR004027 SEC-C motif IX88_03255 c17a9a518647bf7599dddee35c522000 155 Gene3D G3DSA:3.10.450.50 1 155 1.5E-57 T 11-10-2018 IX88_03255 c17a9a518647bf7599dddee35c522000 155 SUPERFAMILY SSF103642 131 154 2.75E-8 T 11-10-2018 IX88_01210 c79ba83d0f399105be1447db04ba1f46 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 8 102 6.1E-11 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD IX88_02600 018d8a6f138f9a76a0217d269c3d13a5 297 SUPERFAMILY SSF53448 5 223 7.67E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_02600 018d8a6f138f9a76a0217d269c3d13a5 297 Pfam PF00535 Glycosyl transferase family 2 6 136 4.9E-26 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 IX88_02600 018d8a6f138f9a76a0217d269c3d13a5 297 Gene3D G3DSA:3.90.550.10 2 249 1.3E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_02515 36161d05bff9630f48158c1507230e97 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 2.6E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_02515 36161d05bff9630f48158c1507230e97 212 SUPERFAMILY SSF46689 2 76 2.13E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_02515 36161d05bff9630f48158c1507230e97 212 Gene3D G3DSA:1.10.357.10 53 212 7.0E-38 T 11-10-2018 IX88_02515 36161d05bff9630f48158c1507230e97 212 Gene3D G3DSA:1.10.10.60 1 52 1.4E-25 T 11-10-2018 IX88_06060 d7ae45c53490b34fba2399bd0882b745 220 Pfam PF04315 Elongation factor P hydroxylase 53 214 2.3E-61 T 11-10-2018 IPR007411 Elongation factor P hydroxylase IX88_00525 f5d6c20413b74622b9105552ef9040dd 410 SUPERFAMILY SSF51735 109 296 2.23E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_00525 f5d6c20413b74622b9105552ef9040dd 410 SUPERFAMILY SSF55021 333 409 2.24E-19 T 11-10-2018 IX88_00525 f5d6c20413b74622b9105552ef9040dd 410 Gene3D G3DSA:3.30.70.260 329 409 1.5E-30 T 11-10-2018 IX88_00525 f5d6c20413b74622b9105552ef9040dd 410 SUPERFAMILY SSF52283 9 135 1.02E-49 T 11-10-2018 IX88_00525 f5d6c20413b74622b9105552ef9040dd 410 Gene3D G3DSA:3.40.50.720 110 298 1.0E-107 T 11-10-2018 IX88_00525 f5d6c20413b74622b9105552ef9040dd 410 Gene3D G3DSA:3.40.50.720 15 313 1.0E-107 T 11-10-2018 IX88_00525 f5d6c20413b74622b9105552ef9040dd 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 155 182 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 IX88_00525 f5d6c20413b74622b9105552ef9040dd 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 295 7.9E-52 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 IX88_00525 f5d6c20413b74622b9105552ef9040dd 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 327 3.3E-36 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 IX88_09760 1edea5199672b1004cc819b4dc98b0d4 337 Gene3D G3DSA:3.90.1200.10 93 330 7.5E-66 T 11-10-2018 IX88_09760 1edea5199672b1004cc819b4dc98b0d4 337 SUPERFAMILY SSF56112 9 307 8.25E-44 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily IX88_09760 1edea5199672b1004cc819b4dc98b0d4 337 Pfam PF01636 Phosphotransferase enzyme family 26 244 2.9E-25 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase IX88_09760 1edea5199672b1004cc819b4dc98b0d4 337 Gene3D G3DSA:3.30.200.20 1 92 4.8E-25 T 11-10-2018 IX88_01500 bfa14b093fb90981ada0b6a855c1753d 145 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 27 143 1.3E-26 T 11-10-2018 IPR019223 Domain of unknown function DUF2147 IX88_01500 bfa14b093fb90981ada0b6a855c1753d 145 Gene3D G3DSA:2.40.128.520 23 145 4.0E-19 T 11-10-2018 IX88_17415 4292557b0d03a3cb34317294c10a8d7e 161 PIRSF PIRSF030820 3 160 3.9E-32 T 11-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 IX88_17415 4292557b0d03a3cb34317294c10a8d7e 161 Pfam PF06073 Bacterial protein of unknown function (DUF934) 55 155 6.1E-31 T 11-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 IX88_13555 add991b8eca15edd36d81cdc57fd2803 168 SUPERFAMILY SSF55729 1 147 2.66E-29 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_13555 add991b8eca15edd36d81cdc57fd2803 168 Gene3D G3DSA:3.40.630.30 1 163 8.1E-31 T 11-10-2018 IX88_13555 add991b8eca15edd36d81cdc57fd2803 168 Pfam PF13302 Acetyltransferase (GNAT) domain 6 145 1.8E-20 T 11-10-2018 IPR000182 GNAT domain IX88_10690 86bf54c632c4d9c66011d0f61b027d97 315 Pfam PF13557 Putative MetA-pathway of phenol degradation 60 311 7.0E-61 T 11-10-2018 IPR025737 MetA-pathway of phenol degradation, putative IX88_03010 3ae4b4b3cc0c7271da2234bbc66478d5 208 PIRSF PIRSF006324 1 206 2.0E-50 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_03010 3ae4b4b3cc0c7271da2234bbc66478d5 208 Pfam PF01810 LysE type translocator 16 201 4.7E-35 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_06225 f09c50a9bd26e4efe6aa519636572775 394 SUPERFAMILY SSF56935 35 394 1.81E-5 T 11-10-2018 IX88_06225 f09c50a9bd26e4efe6aa519636572775 394 Pfam PF07396 Phosphate-selective porin O and P 100 199 5.2E-6 T 11-10-2018 IPR010870 Phosphate-selective porin O/P IX88_07685 71156faa2d850428aa30b53577f363f2 235 Gene3D G3DSA:3.30.450.20 3 180 4.1E-21 T 11-10-2018 IX88_07685 71156faa2d850428aa30b53577f363f2 235 Pfam PF02743 Cache domain 7 207 2.7E-15 T 11-10-2018 IPR033479 Double Cache domain 1 IX88_15610 67b717465c31d9a029370fcfdb9861f3 439 SUPERFAMILY SSF56601 3 278 1.55E-68 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like IX88_15610 67b717465c31d9a029370fcfdb9861f3 439 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 28 241 1.9E-63 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 IX88_15610 67b717465c31d9a029370fcfdb9861f3 439 Gene3D G3DSA:3.40.710.10 18 279 1.2E-80 T 11-10-2018 IX88_15610 67b717465c31d9a029370fcfdb9861f3 439 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 114 131 5.3E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 IX88_15610 67b717465c31d9a029370fcfdb9861f3 439 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 141 154 5.3E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 IX88_15610 67b717465c31d9a029370fcfdb9861f3 439 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 59 70 5.3E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 IX88_16985 4a12f49c6568a273b97f1d1e571943f0 451 Pfam PF00324 Amino acid permease 16 420 1.2E-111 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 IX88_16985 4a12f49c6568a273b97f1d1e571943f0 451 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 IX88_16985 4a12f49c6568a273b97f1d1e571943f0 451 Gene3D G3DSA:1.20.1740.10 8 451 1.9E-68 T 11-10-2018 IX88_16985 4a12f49c6568a273b97f1d1e571943f0 451 PIRSF PIRSF006060 2 450 4.6E-81 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_17740 8c955451baedeb3673961375a6995fa0 189 Pfam PF04011 LemA family 8 168 6.3E-34 T 11-10-2018 IPR007156 LemA IX88_17740 8c955451baedeb3673961375a6995fa0 189 SUPERFAMILY SSF140478 26 165 2.09E-32 T 11-10-2018 IPR023353 LemA-like domain superfamily IX88_17740 8c955451baedeb3673961375a6995fa0 189 Gene3D G3DSA:1.20.1440.20 17 177 3.1E-30 T 11-10-2018 IPR023353 LemA-like domain superfamily IX88_18055 30e54b823b854093aff5540868914ce6 201 Gene3D G3DSA:2.60.120.620 11 198 1.5E-48 T 11-10-2018 IX88_18055 30e54b823b854093aff5540868914ce6 201 SMART SM00702 30 194 3.2E-12 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 IX88_18055 30e54b823b854093aff5540868914ce6 201 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 106 194 1.8E-21 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 IX88_01675 e7756965769840ddc8d31820cf9da087 384 SUPERFAMILY SSF53383 4 383 9.11E-98 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase IX88_01675 e7756965769840ddc8d31820cf9da087 384 Gene3D G3DSA:3.90.1150.10 17 380 1.3E-129 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 IX88_01675 e7756965769840ddc8d31820cf9da087 384 Pfam PF00155 Aminotransferase class I and II 29 377 2.0E-62 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 IX88_01675 e7756965769840ddc8d31820cf9da087 384 Gene3D G3DSA:3.40.640.10 41 280 1.3E-129 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 IX88_17540 cd3455abe408b88ed493802aded0887c 331 Pfam PF10974 Protein of unknown function (DUF2804) 7 330 1.6E-63 T 11-10-2018 IPR021243 Protein of unknown function DUF2804 IX88_09035 9ad4d4ef0125e7268306bcab1167bd7e 229 Pfam PF04172 LrgB-like family 12 224 1.1E-65 T 11-10-2018 IPR007300 CidB/LrgB family IX88_09805 88b405e30cb07cc7bfb3b36db36f121c 253 Pfam PF02348 Cytidylyltransferase 4 222 9.0E-50 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 IX88_09805 88b405e30cb07cc7bfb3b36db36f121c 253 Gene3D G3DSA:3.90.550.10 1 253 2.3E-93 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_09805 88b405e30cb07cc7bfb3b36db36f121c 253 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 242 3.3E-79 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 IX88_09805 88b405e30cb07cc7bfb3b36db36f121c 253 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 249 36.458 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 IX88_09805 88b405e30cb07cc7bfb3b36db36f121c 253 SUPERFAMILY SSF53448 3 246 2.69E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_08420 a73924477e72d9a0aa1548e4f4d4acac 434 Gene3D G3DSA:1.20.1250.20 18 429 2.7E-69 T 11-10-2018 IX88_08420 a73924477e72d9a0aa1548e4f4d4acac 434 Pfam PF07690 Major Facilitator Superfamily 28 348 8.6E-40 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_08420 a73924477e72d9a0aa1548e4f4d4acac 434 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_08420 a73924477e72d9a0aa1548e4f4d4acac 434 SUPERFAMILY SSF103473 10 429 3.4E-76 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_08420 a73924477e72d9a0aa1548e4f4d4acac 434 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 93 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 IX88_11395 fc16637232f2ffd90fd8342be27b6de6 304 SUPERFAMILY SSF46785 1 83 7.35E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_11395 fc16637232f2ffd90fd8342be27b6de6 304 SUPERFAMILY SSF53850 90 295 1.45E-25 T 11-10-2018 IX88_11395 fc16637232f2ffd90fd8342be27b6de6 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.6E-21 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_11395 fc16637232f2ffd90fd8342be27b6de6 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.2E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_11395 fc16637232f2ffd90fd8342be27b6de6 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.2E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_11395 fc16637232f2ffd90fd8342be27b6de6 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.2E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_11395 fc16637232f2ffd90fd8342be27b6de6 304 Gene3D G3DSA:3.40.190.10 162 268 1.8E-69 T 11-10-2018 IX88_11395 fc16637232f2ffd90fd8342be27b6de6 304 Pfam PF03466 LysR substrate binding domain 90 289 7.2E-28 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_11395 fc16637232f2ffd90fd8342be27b6de6 304 Gene3D G3DSA:1.10.10.10 1 91 2.7E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_11395 fc16637232f2ffd90fd8342be27b6de6 304 Gene3D G3DSA:3.40.190.10 92 293 1.8E-69 T 11-10-2018 IX88_16115 322f3cc00eb969e07dfb8e9e3098d95c 495 SUPERFAMILY SSF56954 12 478 2.88E-59 T 11-10-2018 IX88_16115 322f3cc00eb969e07dfb8e9e3098d95c 495 Pfam PF02321 Outer membrane efflux protein 310 474 7.4E-19 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IX88_16115 322f3cc00eb969e07dfb8e9e3098d95c 495 Pfam PF02321 Outer membrane efflux protein 40 279 2.2E-16 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 IX88_08400 f7ca600780915502e08a699edf36a833 286 SUPERFAMILY SSF103481 181 281 1.57E-11 T 11-10-2018 IX88_08400 f7ca600780915502e08a699edf36a833 286 SUPERFAMILY SSF103481 46 134 3.4E-6 T 11-10-2018 IX88_08400 f7ca600780915502e08a699edf36a833 286 Pfam PF00892 EamA-like transporter family 146 275 2.5E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_13640 d5c49a69777185285f9f73874882955a 555 Pfam PF02470 MlaD protein 181 241 1.4E-7 T 11-10-2018 IPR003399 Mce/MlaD IX88_13640 d5c49a69777185285f9f73874882955a 555 Pfam PF02470 MlaD protein 66 156 2.4E-10 T 11-10-2018 IPR003399 Mce/MlaD IX88_13640 d5c49a69777185285f9f73874882955a 555 Pfam PF02470 MlaD protein 311 406 3.0E-15 T 11-10-2018 IPR003399 Mce/MlaD IX88_12845 8b226f0e0e856390fc26248c95dd6949 239 Pfam PF02308 MgtC family 21 141 1.3E-35 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 IX88_12845 8b226f0e0e856390fc26248c95dd6949 239 PRINTS PR01837 MgtC/SapB protein signature 24 43 1.6E-41 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 IX88_12845 8b226f0e0e856390fc26248c95dd6949 239 PRINTS PR01837 MgtC/SapB protein signature 96 120 1.6E-41 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 IX88_12845 8b226f0e0e856390fc26248c95dd6949 239 PRINTS PR01837 MgtC/SapB protein signature 69 91 1.6E-41 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 IX88_12845 8b226f0e0e856390fc26248c95dd6949 239 PRINTS PR01837 MgtC/SapB protein signature 43 61 1.6E-41 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 IX88_03925 60b92aca2c60b3b51cc3fd32a1ee2498 198 SUPERFAMILY SSF52540 1 196 3.62E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_03925 60b92aca2c60b3b51cc3fd32a1ee2498 198 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 187 6.5E-57 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 IX88_03925 60b92aca2c60b3b51cc3fd32a1ee2498 198 Pfam PF01121 Dephospho-CoA kinase 4 178 7.5E-65 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 IX88_03925 60b92aca2c60b3b51cc3fd32a1ee2498 198 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 27.413 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 IX88_03925 60b92aca2c60b3b51cc3fd32a1ee2498 198 Gene3D G3DSA:3.40.50.300 1 198 6.2E-69 T 11-10-2018 IX88_17875 371457e0249bf2956e1be46d32f146c2 167 Pfam PF13689 Domain of unknown function (DUF4154) 34 164 2.2E-23 T 11-10-2018 IPR025293 YfiR-like IX88_02765 fe06d5fdb8550deb9ad44c5b933086bd 126 Pfam PF12680 SnoaL-like domain 10 107 1.0E-9 T 11-10-2018 IPR037401 SnoaL-like domain IX88_02765 fe06d5fdb8550deb9ad44c5b933086bd 126 SUPERFAMILY SSF54427 2 114 2.99E-18 T 11-10-2018 IPR032710 NTF2-like domain superfamily IX88_02765 fe06d5fdb8550deb9ad44c5b933086bd 126 Gene3D G3DSA:3.10.450.50 3 126 1.4E-21 T 11-10-2018 IX88_16755 d45cc25f8b05c94c31b9dfbe3bb37f4b 95 Gene3D G3DSA:3.30.70.260 8 95 2.8E-22 T 11-10-2018 IX88_16755 d45cc25f8b05c94c31b9dfbe3bb37f4b 95 SUPERFAMILY SSF117991 10 95 2.88E-20 T 11-10-2018 IPR027471 YbeD-like domain superfamily IX88_16755 d45cc25f8b05c94c31b9dfbe3bb37f4b 95 Pfam PF04359 Protein of unknown function (DUF493) 13 94 1.1E-23 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 IX88_11150 9d3caf39b7b6fde81423ea4efe884b17 323 SUPERFAMILY SSF51735 1 320 2.65E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_11150 9d3caf39b7b6fde81423ea4efe884b17 323 Gene3D G3DSA:3.90.25.10 178 315 1.6E-115 T 11-10-2018 IX88_11150 9d3caf39b7b6fde81423ea4efe884b17 323 Gene3D G3DSA:3.40.50.720 6 305 1.6E-115 T 11-10-2018 IX88_11150 9d3caf39b7b6fde81423ea4efe884b17 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 206 1.5E-23 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 IX88_04435 dc13edfc2925569a8ee9ef7b68be01cb 373 Gene3D G3DSA:3.60.10.10 105 322 4.7E-20 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily IX88_04435 dc13edfc2925569a8ee9ef7b68be01cb 373 SUPERFAMILY SSF56219 101 319 3.93E-32 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily IX88_04435 dc13edfc2925569a8ee9ef7b68be01cb 373 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 119 312 1.5E-14 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase IX88_04230 2bdaf00e02d833f20f8d29553517497e 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 121 18.144 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 IX88_04230 2bdaf00e02d833f20f8d29553517497e 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 116 2.2E-24 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 IX88_04230 2bdaf00e02d833f20f8d29553517497e 126 TIGRFAM TIGR00494 crcB: protein CrcB 6 117 2.4E-31 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 IX88_18140 783f9c0e06991ef5ca2ee7109127932b 213 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 7 200 1.2E-43 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 IX88_18140 783f9c0e06991ef5ca2ee7109127932b 213 Gene3D G3DSA:3.90.850.10 1 205 1.6E-61 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 IX88_18140 783f9c0e06991ef5ca2ee7109127932b 213 SUPERFAMILY SSF56529 3 200 1.57E-59 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 IX88_09220 b2387383eed98d62623132a2ed4678a0 142 SUPERFAMILY SSF52833 5 138 3.66E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_09220 b2387383eed98d62623132a2ed4678a0 142 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 117 9.9E-39 T 11-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 IX88_09220 b2387383eed98d62623132a2ed4678a0 142 Pfam PF03960 ArsC family 8 115 1.1E-14 T 11-10-2018 IPR006660 Arsenate reductase-like IX88_09220 b2387383eed98d62623132a2ed4678a0 142 Gene3D G3DSA:3.40.30.10 2 142 2.3E-55 T 11-10-2018 IX88_08425 033a3fc9457a4538936564b90a1f8201 145 Gene3D G3DSA:2.40.128.520 25 145 1.3E-15 T 11-10-2018 IX88_08425 033a3fc9457a4538936564b90a1f8201 145 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 27 143 4.7E-24 T 11-10-2018 IPR019223 Domain of unknown function DUF2147 IX88_06620 c883f107a83a590354340b297fd6d4bd 444 Gene3D G3DSA:1.20.1740.10 2 443 8.6E-62 T 11-10-2018 IX88_06620 c883f107a83a590354340b297fd6d4bd 444 PIRSF PIRSF006060 3 443 7.7E-53 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_06620 c883f107a83a590354340b297fd6d4bd 444 Pfam PF13520 Amino acid permease 6 408 2.9E-63 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_06620 c883f107a83a590354340b297fd6d4bd 444 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 438 6.2E-147 T 11-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 IX88_00645 1dbe17bba59f013262abba7fbd980be4 64 Gene3D G3DSA:1.10.10.1100 1 57 2.3E-23 T 11-10-2018 IX88_00645 1dbe17bba59f013262abba7fbd980be4 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 1.3E-14 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain IX88_13765 c1e61fe11c86e75b097ff4064f3a9b0f 120 SUPERFAMILY SSF101756 31 118 8.37E-25 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily IX88_13765 c1e61fe11c86e75b097ff4064f3a9b0f 120 Gene3D G3DSA:2.40.50.200 16 120 9.2E-27 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily IX88_13765 c1e61fe11c86e75b097ff4064f3a9b0f 120 Pfam PF04076 Bacterial OB fold (BOF) protein 31 117 4.9E-24 T 11-10-2018 IPR005220 Bacterial OB-fold IX88_12510 7292d0b321a2359bc1d98874dfa64d6b 446 Pfam PF13264 Domain of unknown function (DUF4055) 240 374 1.7E-22 T 11-10-2018 IPR025129 Domain of unknown function DUF4055 IX88_12295 1dfa574e450c2c50eb8bc0f8881770e0 363 PIRSF PIRSF004925 1 363 3.0E-100 T 11-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter IX88_12295 1dfa574e450c2c50eb8bc0f8881770e0 363 SUPERFAMILY SSF103473 2 358 5.62E-44 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_12295 1dfa574e450c2c50eb8bc0f8881770e0 363 Pfam PF12832 MFS_1 like family 1 338 5.2E-78 T 11-10-2018 IPR024989 Major facilitator superfamily associated domain IX88_12295 1dfa574e450c2c50eb8bc0f8881770e0 363 Gene3D G3DSA:1.20.1250.20 167 362 6.7E-35 T 11-10-2018 IX88_12295 1dfa574e450c2c50eb8bc0f8881770e0 363 Gene3D G3DSA:1.20.1250.20 1 166 2.3E-19 T 11-10-2018 IX88_14960 b6098a2ee965c47162301464b1067414 72 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 44 49 - T 11-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 IX88_16220 9ea0a30c9ef97c40f5ec79795b8cb3a0 130 Pfam PF06803 Protein of unknown function (DUF1232) 35 69 6.2E-13 T 11-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 IX88_13825 fb8cf3c1a4fdec3eeabe5b36b83fd5da 317 Pfam PF15575 Immunity protein 49 72 269 5.8E-21 T 11-10-2018 IPR029074 Immunity protein 49 IX88_15440 957fa527244195b56bc1224ed8a1de5c 459 Pfam PF00324 Amino acid permease 17 449 2.0E-111 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 IX88_15440 957fa527244195b56bc1224ed8a1de5c 459 PIRSF PIRSF006060 1 458 5.2E-70 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_15440 957fa527244195b56bc1224ed8a1de5c 459 Gene3D G3DSA:1.20.1740.10 9 457 5.8E-58 T 11-10-2018 IX88_15440 957fa527244195b56bc1224ed8a1de5c 459 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 IX88_10475 6d593698581477feddd1c86849031a8a 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10475 6d593698581477feddd1c86849031a8a 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10475 6d593698581477feddd1c86849031a8a 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10475 6d593698581477feddd1c86849031a8a 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 IX88_10475 6d593698581477feddd1c86849031a8a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.4E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10475 6d593698581477feddd1c86849031a8a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 8.4E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10475 6d593698581477feddd1c86849031a8a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 8.4E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10475 6d593698581477feddd1c86849031a8a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 8.4E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10475 6d593698581477feddd1c86849031a8a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 8.4E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10475 6d593698581477feddd1c86849031a8a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 8.4E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_10475 6d593698581477feddd1c86849031a8a 261 Gene3D G3DSA:3.40.50.720 7 260 1.5E-87 T 11-10-2018 IX88_10475 6d593698581477feddd1c86849031a8a 261 TIGRFAM TIGR02415 23BDH: acetoin reductases 8 261 2.7E-109 T 11-10-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00650+1.1.1.304|MetaCyc: PWY-6389 IX88_10475 6d593698581477feddd1c86849031a8a 261 SUPERFAMILY SSF51735 6 259 4.64E-79 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_10475 6d593698581477feddd1c86849031a8a 261 Pfam PF00106 short chain dehydrogenase 8 199 2.0E-58 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR IX88_14655 359e6fb6cd986f8ff71e094e686ca36b 127 Gene3D G3DSA:1.20.1290.10 3 126 8.9E-38 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 IX88_14655 359e6fb6cd986f8ff71e094e686ca36b 127 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 7.4E-23 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 IX88_14655 359e6fb6cd986f8ff71e094e686ca36b 127 SUPERFAMILY SSF69118 4 123 1.31E-34 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 IX88_02140 5e40526c55cf8e790d73cad3cf5da5db 375 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 4 373 6.4E-134 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 IX88_02140 5e40526c55cf8e790d73cad3cf5da5db 375 Gene3D G3DSA:3.30.420.40 140 335 2.2E-125 T 11-10-2018 IX88_02140 5e40526c55cf8e790d73cad3cf5da5db 375 SUPERFAMILY SSF53067 4 347 4.66E-24 T 11-10-2018 IX88_02140 5e40526c55cf8e790d73cad3cf5da5db 375 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 3 375 40.396 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 IX88_02140 5e40526c55cf8e790d73cad3cf5da5db 375 Gene3D G3DSA:3.30.420.40 11 370 2.2E-125 T 11-10-2018 IX88_10125 8bb42dd439b098ae9770a053ed1d9a5b 457 SUPERFAMILY SSF56112 103 319 6.24E-11 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily IX88_10125 8bb42dd439b098ae9770a053ed1d9a5b 457 Pfam PF03109 ABC1 family 128 232 4.3E-26 T 11-10-2018 IPR004147 UbiB domain IX88_05620 07f7084efe2588dc7594c2b4600e358e 203 Pfam PF01810 LysE type translocator 14 199 3.9E-22 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_02230 9a2e1fc56095ecdd71da7b932613d9b1 87 Pfam PF02583 Metal-sensitive transcriptional repressor 7 85 6.0E-24 T 11-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 IX88_02230 9a2e1fc56095ecdd71da7b932613d9b1 87 Gene3D G3DSA:1.20.58.1000 1 87 5.2E-25 T 11-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily IX88_11360 9e2329ca5411df954c6101ac80b7af1f 298 Gene3D G3DSA:2.40.400.10 57 249 4.2E-8 T 11-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 IX88_11360 9e2329ca5411df954c6101ac80b7af1f 298 SUPERFAMILY SSF160104 68 197 2.33E-8 T 11-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 IX88_00700 e9998996b9b83e65fe18fb4df639ad2e 291 Gene3D G3DSA:3.30.70.1070 84 182 4.5E-8 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 IX88_02210 e625600f94eca375c23cab4d07b06f23 130 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 117 16.132 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 IX88_02210 e625600f94eca375c23cab4d07b06f23 130 Gene3D G3DSA:3.30.230.10 1 121 2.5E-34 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IX88_02210 e625600f94eca375c23cab4d07b06f23 130 Pfam PF00825 Ribonuclease P 7 114 1.3E-24 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 IX88_02210 e625600f94eca375c23cab4d07b06f23 130 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 57 71 - T 11-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 IX88_02210 e625600f94eca375c23cab4d07b06f23 130 SUPERFAMILY SSF54211 5 120 1.74E-25 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold IX88_02210 e625600f94eca375c23cab4d07b06f23 130 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 11 117 6.0E-21 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 IX88_02210 e625600f94eca375c23cab4d07b06f23 130 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 109 6.0E-37 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 IX88_16955 d34bdbbe50f26527a694d2e5eeb50be1 305 SUPERFAMILY SSF52151 35 287 1.07E-57 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IX88_16955 d34bdbbe50f26527a694d2e5eeb50be1 305 Gene3D G3DSA:3.40.1090.20 159 211 3.3E-5 T 11-10-2018 IX88_16955 d34bdbbe50f26527a694d2e5eeb50be1 305 Pfam PF01734 Patatin-like phospholipase 41 198 2.0E-24 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 IX88_16955 d34bdbbe50f26527a694d2e5eeb50be1 305 Gene3D G3DSA:3.40.1090.10 24 137 1.1E-24 T 11-10-2018 IX88_09045 6e3c5233e47a9c6b720c0046d1f6f88f 211 Gene3D G3DSA:2.30.110.10 1 207 1.1E-65 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 IX88_09045 6e3c5233e47a9c6b720c0046d1f6f88f 211 Pfam PF04299 Putative FMN-binding domain 1 168 2.2E-63 T 11-10-2018 IPR007396 Transcriptional regulator PAI 2-type IX88_09045 6e3c5233e47a9c6b720c0046d1f6f88f 211 SUPERFAMILY SSF50475 12 196 4.25E-40 T 11-10-2018 IX88_09045 6e3c5233e47a9c6b720c0046d1f6f88f 211 PIRSF PIRSF010372 1 211 3.8E-83 T 11-10-2018 IPR007396 Transcriptional regulator PAI 2-type IX88_15255 fe4f9bfb358e1a477621aa85b978a3b1 207 Pfam PF08348 YheO-like PAS domain 9 119 8.2E-35 T 11-10-2018 IPR013559 YheO-like IX88_15255 fe4f9bfb358e1a477621aa85b978a3b1 207 Pfam PF13309 HTH domain 144 204 3.6E-18 T 11-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain IX88_15255 fe4f9bfb358e1a477621aa85b978a3b1 207 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 5 130 1.0E-70 T 11-10-2018 IPR013559 YheO-like IX88_15140 4c453e6c1118dae6a6edc22f6a375938 156 Pfam PF11220 Protein of unknown function (DUF3015) 19 155 2.2E-40 T 11-10-2018 IPR021383 Protein of unknown function DUF3015 IX88_14360 21eae5528301a1ca8ed6aa036d2a60f6 318 Hamap MF_01818 Ribonuclease BN [rbn]. 2 308 29.199 T 11-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 IX88_14360 21eae5528301a1ca8ed6aa036d2a60f6 318 SUPERFAMILY SSF56281 4 309 7.85E-60 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_14360 21eae5528301a1ca8ed6aa036d2a60f6 318 Gene3D G3DSA:3.60.15.10 2 308 3.6E-76 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_14360 21eae5528301a1ca8ed6aa036d2a60f6 318 Pfam PF00753 Metallo-beta-lactamase superfamily 29 95 2.4E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_14745 726ad52bb7f1b68c37dcf7c45de5fadf 169 SUPERFAMILY SSF64288 10 158 4.87E-38 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IX88_14745 726ad52bb7f1b68c37dcf7c45de5fadf 169 Pfam PF04345 Chorismate lyase 13 153 3.4E-19 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 IX88_14745 726ad52bb7f1b68c37dcf7c45de5fadf 169 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 1 159 21.88 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 IX88_14745 726ad52bb7f1b68c37dcf7c45de5fadf 169 Gene3D G3DSA:3.40.1410.10 2 159 1.5E-35 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily IX88_10900 c0c341b7d458ce165b5413333a4ca35e 391 Pfam PF05707 Zonular occludens toxin (Zot) 1 177 1.5E-15 T 11-10-2018 IPR008900 Zona occludens toxin IX88_10900 c0c341b7d458ce165b5413333a4ca35e 391 Gene3D G3DSA:3.40.50.300 1 177 8.7E-38 T 11-10-2018 IX88_02445 86bebe9eb04c43dfb8568158dbee0b56 266 Pfam PF00005 ABC transporter 47 183 3.0E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_02445 86bebe9eb04c43dfb8568158dbee0b56 266 SUPERFAMILY SSF52540 32 253 2.61E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_02445 86bebe9eb04c43dfb8568158dbee0b56 266 Gene3D G3DSA:3.40.50.300 32 262 2.8E-64 T 11-10-2018 IX88_02445 86bebe9eb04c43dfb8568158dbee0b56 266 SMART SM00382 56 233 1.2E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_16870 c71a5e08b32a2edbdfafc5ef77941da6 144 Gene3D G3DSA:3.10.450.50 3 138 4.8E-19 T 11-10-2018 IX88_16870 c71a5e08b32a2edbdfafc5ef77941da6 144 SUPERFAMILY SSF54427 1 129 1.47E-19 T 11-10-2018 IPR032710 NTF2-like domain superfamily IX88_16870 c71a5e08b32a2edbdfafc5ef77941da6 144 Pfam PF13577 SnoaL-like domain 4 121 1.0E-11 T 11-10-2018 IPR037401 SnoaL-like domain IX88_10255 d332eaf06e402056d05b3d5b5b373323 518 Pfam PF03929 PepSY-associated TM region 10 358 5.0E-57 T 11-10-2018 IPR005625 PepSY-associated TM protein IX88_12705 1d1d6ab7a88d2b764323aa1a69948ae0 287 SMART SM01236 111 223 1.6E-13 T 11-10-2018 IX88_12705 1d1d6ab7a88d2b764323aa1a69948ae0 287 Gene3D G3DSA:1.20.910.10 29 279 3.2E-24 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IX88_12705 1d1d6ab7a88d2b764323aa1a69948ae0 287 Pfam PF14518 Iron-containing redox enzyme 133 252 2.5E-7 T 11-10-2018 IX88_12705 1d1d6ab7a88d2b764323aa1a69948ae0 287 SUPERFAMILY SSF48613 33 273 5.89E-8 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IX88_17070 8ffb542273abfe03414a0cf67628f61d 163 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 14 158 2.0E-22 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 IX88_17070 8ffb542273abfe03414a0cf67628f61d 163 Pfam PF04093 rod shape-determining protein MreD 16 154 1.6E-11 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 IX88_08885 dd3f0d8c52db6a9742a228447e77d276 469 Pfam PF14518 Iron-containing redox enzyme 105 263 2.8E-28 T 11-10-2018 IX88_08885 dd3f0d8c52db6a9742a228447e77d276 469 Gene3D G3DSA:1.20.910.10 94 276 7.2E-10 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 IX88_08885 dd3f0d8c52db6a9742a228447e77d276 469 SMART SM01236 136 234 7.2E-24 T 11-10-2018 IX88_11675 8049d13b2481f7c6fac1c64324c01fdb 281 PIRSF PIRSF007580 1 277 1.7E-59 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_11675 8049d13b2481f7c6fac1c64324c01fdb 281 Pfam PF10118 Predicted metal-dependent hydrolase 14 259 3.0E-69 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 IX88_05045 fbba1f8f18f03c8ec7c9d88a38f389eb 104 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 5 99 6.0E-35 T 11-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 IX88_01495 8e16294a1902fc28d28b3178819f9f4e 116 SUPERFAMILY SSF52833 1 113 3.53E-31 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_01495 8e16294a1902fc28d28b3178819f9f4e 116 Gene3D G3DSA:3.40.30.10 1 115 8.5E-40 T 11-10-2018 IX88_01495 8e16294a1902fc28d28b3178819f9f4e 116 Pfam PF03960 ArsC family 5 112 7.9E-16 T 11-10-2018 IPR006660 Arsenate reductase-like IX88_01495 8e16294a1902fc28d28b3178819f9f4e 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 114 1.2E-27 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR IX88_12080 636760399432843518d57a8bae2c675e 274 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 225 251 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 IX88_12080 636760399432843518d57a8bae2c675e 274 Pfam PF01148 Cytidylyltransferase family 3 265 1.1E-59 T 11-10-2018 IX88_18100 56d9b251a222485c872f117db1935012 294 SUPERFAMILY SSF74653 188 287 5.0E-17 T 11-10-2018 IX88_18100 56d9b251a222485c872f117db1935012 294 Gene3D G3DSA:3.30.1150.10 130 287 1.4E-17 T 11-10-2018 IX88_18100 56d9b251a222485c872f117db1935012 294 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 207 284 3.3E-13 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 IX88_18100 56d9b251a222485c872f117db1935012 294 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 209 285 3.6E-13 T 11-10-2018 IPR006260 TonB/TolA, C-terminal IX88_11650 d9457e0aef4f4a6e197805ea2be6bc07 225 Gene3D G3DSA:3.30.240.20 92 165 8.3E-14 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily IX88_11650 d9457e0aef4f4a6e197805ea2be6bc07 225 Pfam PF04239 Protein of unknown function (DUF421) 101 184 3.3E-13 T 11-10-2018 IPR007353 Protein of unknown function DUF421 IX88_06070 98ba8649ef93f2dd0e970e36fffcaf69 61 SUPERFAMILY SSF57829 2 54 1.22E-17 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 IX88_06070 98ba8649ef93f2dd0e970e36fffcaf69 61 Pfam PF01783 Ribosomal L32p protein family 2 55 2.7E-20 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_06070 98ba8649ef93f2dd0e970e36fffcaf69 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.561 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_06070 98ba8649ef93f2dd0e970e36fffcaf69 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 53 5.0E-20 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_15295 b7991e759100346b1efdef4bde5c5177 100 Pfam PF04328 Selenoprotein, putative 36 100 3.3E-23 T 11-10-2018 IPR007423 Selenoprotein, putative IX88_02060 222f340397f9ee1811437238a040bdc3 243 Pfam PF01925 Sulfite exporter TauE/SafE 8 240 9.8E-29 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 IX88_14035 f5276dbb0691dcf7e2e66a0cb1ca3434 466 Pfam PF11134 Phage stabilisation protein 1 435 6.3E-41 T 11-10-2018 IPR021098 Bacteriophage P22, Gp10, DNA-stabilising IX88_13740 ad7fe7fc259c6dd92f849057fe44d78c 383 SUPERFAMILY SSF53474 72 380 4.53E-29 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_13740 ad7fe7fc259c6dd92f849057fe44d78c 383 Pfam PF00561 alpha/beta hydrolase fold 96 361 1.2E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_00240 ee6c8278e5a7bcbb16a03343455e0e33 211 SUPERFAMILY SSF53271 51 205 1.17E-22 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like IX88_00240 ee6c8278e5a7bcbb16a03343455e0e33 211 Gene3D G3DSA:3.40.50.2020 59 210 2.8E-16 T 11-10-2018 IX88_00240 ee6c8278e5a7bcbb16a03343455e0e33 211 Pfam PF00156 Phosphoribosyl transferase domain 161 208 9.8E-8 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 IX88_11900 08ae8cd4eb7d09fec39b0f8cac87015e 139 Gene3D G3DSA:3.30.450.150 1 135 1.9E-29 T 11-10-2018 IPR038084 GlcG-like domain superfamily IX88_11900 08ae8cd4eb7d09fec39b0f8cac87015e 139 SUPERFAMILY SSF143744 3 134 1.24E-29 T 11-10-2018 IPR038084 GlcG-like domain superfamily IX88_11900 08ae8cd4eb7d09fec39b0f8cac87015e 139 Pfam PF03928 Haem-degrading 7 130 3.7E-22 T 11-10-2018 IPR005624 Haem-degrading IX88_02935 8e6a9f3187889c6eaec98c7d6a9e8838 196 Pfam PF01810 LysE type translocator 13 175 2.0E-6 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_00925 09f0c294f70d1cf1efb042bf90ce2529 143 Pfam PF00583 Acetyltransferase (GNAT) family 15 124 6.2E-20 T 11-10-2018 IPR000182 GNAT domain IX88_00925 09f0c294f70d1cf1efb042bf90ce2529 143 SUPERFAMILY SSF55729 1 129 9.47E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_00925 09f0c294f70d1cf1efb042bf90ce2529 143 Gene3D G3DSA:3.40.630.30 3 142 2.0E-40 T 11-10-2018 IX88_08090 fcd1eac20a74c3d7f9ea99b4cef7cae3 195 Pfam PF01596 O-methyltransferase 32 161 9.1E-22 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 IX88_08090 fcd1eac20a74c3d7f9ea99b4cef7cae3 195 Gene3D G3DSA:3.40.50.150 6 195 1.2E-50 T 11-10-2018 IX88_08090 fcd1eac20a74c3d7f9ea99b4cef7cae3 195 SUPERFAMILY SSF53335 29 194 1.7E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IX88_10215 2a861a5a35cde2d83002e5fdf1ecc61d 172 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 166 3.0E-58 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 IX88_10215 2a861a5a35cde2d83002e5fdf1ecc61d 172 PIRSF PIRSF006135 1 171 1.8E-54 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 IX88_10215 2a861a5a35cde2d83002e5fdf1ecc61d 172 Gene3D G3DSA:3.40.50.300 2 169 5.4E-54 T 11-10-2018 IX88_10215 2a861a5a35cde2d83002e5fdf1ecc61d 172 SUPERFAMILY SSF52540 3 169 1.32E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_08290 6c0e383cc8ff7421c91af4fc7557c4db 197 Pfam PF13628 Domain of unknown function (DUF4142) 52 192 1.0E-22 T 11-10-2018 IPR025419 Domain of unknown function DUF4142 IX88_12700 cb13f160d282d2431c94cc155eb4f1af 420 Gene3D G3DSA:1.10.443.10 213 403 7.1E-30 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 IX88_12700 cb13f160d282d2431c94cc155eb4f1af 420 SUPERFAMILY SSF56349 97 390 5.0E-39 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 IX88_12700 cb13f160d282d2431c94cc155eb4f1af 420 Pfam PF00589 Phage integrase family 233 367 7.4E-18 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 IX88_12700 cb13f160d282d2431c94cc155eb4f1af 420 Gene3D G3DSA:1.10.150.130 93 201 1.4E-6 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal IX88_11230 e53e3c2a983baad7b0ef77d34d135240 429 Pfam PF07158 Dicarboxylate carrier protein MatC N-terminus 4 147 1.8E-33 T 11-10-2018 IPR009827 Dicarboxylate carrier MatC N-terminal IX88_00305 4771b373c3b5134c22476e150a8e9787 200 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 197 43.847 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 IX88_00305 4771b373c3b5134c22476e150a8e9787 200 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 194 2.2E-76 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 IX88_00305 4771b373c3b5134c22476e150a8e9787 200 Gene3D G3DSA:3.40.50.10990 2 175 4.8E-71 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 IX88_00305 4771b373c3b5134c22476e150a8e9787 200 SUPERFAMILY SSF142695 3 174 7.98E-62 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 IX88_00305 4771b373c3b5134c22476e150a8e9787 200 Pfam PF00925 GTP cyclohydrolase II 8 171 6.9E-66 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 IX88_09135 a4a022864b7cdea5a62d33d3bc388940 481 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 10 439 2.8E-168 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 IX88_09135 a4a022864b7cdea5a62d33d3bc388940 481 PIRSF PIRSF006446 3 464 3.3E-212 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 IX88_02365 70f77256f698d049ee9ab9074cf7aa1d 356 Pfam PF07859 alpha/beta hydrolase fold 123 328 3.2E-62 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 IX88_02365 70f77256f698d049ee9ab9074cf7aa1d 356 SUPERFAMILY SSF53474 68 343 4.05E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_02365 70f77256f698d049ee9ab9074cf7aa1d 356 Gene3D G3DSA:3.40.50.1820 48 351 2.1E-72 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_07430 1cdc5151193dba044f239e278c42c648 292 Pfam PF11726 Inovirus Gp2 122 290 9.0E-19 T 11-10-2018 IX88_04645 89727c7f5cf51cfa22252d1a0eea25ca 208 Gene3D G3DSA:3.90.950.10 8 208 3.1E-69 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like IX88_04645 89727c7f5cf51cfa22252d1a0eea25ca 208 SUPERFAMILY SSF52972 6 207 3.4E-66 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like IX88_04645 89727c7f5cf51cfa22252d1a0eea25ca 208 Pfam PF01725 Ham1 family 12 204 8.7E-53 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 IX88_04645 89727c7f5cf51cfa22252d1a0eea25ca 208 Hamap MF_01405 dITP/XTP pyrophosphatase. 10 208 48.306 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 IX88_04645 89727c7f5cf51cfa22252d1a0eea25ca 208 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 12 206 2.3E-52 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 IX88_10505 69df8df3c80019796cfba0096a06efe0 263 Pfam PF01925 Sulfite exporter TauE/SafE 8 253 3.7E-39 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 IX88_01835 eca2e2548d955c374d7be2234d8b0a91 370 Pfam PF01757 Acyltransferase family 4 349 6.5E-31 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 IX88_04905 92f500fe50bdd11069f06f659dfbe02f 111 Pfam PF13511 Domain of unknown function (DUF4124) 18 64 5.4E-10 T 11-10-2018 IPR025392 Domain of unknown function DUF4124 IX88_01205 db83053f4bdbb69e6642f98918247585 231 Pfam PF03591 AzlC protein 30 165 2.6E-28 T 11-10-2018 IPR011606 Branched-chain amino acid transport, permease IX88_07075 c33284ea4e5692205fea4178641520f7 245 Pfam PF01774 UreD urease accessory protein 13 217 3.6E-45 T 11-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 IX88_07075 c33284ea4e5692205fea4178641520f7 245 Hamap MF_01384 Urease accessory protein UreD [ureD]. 3 229 21.066 T 11-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 IX88_04395 f4243e930678f0d343dc15907bc6bad3 122 Gene3D G3DSA:1.20.1270.180 14 114 2.9E-8 T 11-10-2018 IX88_04395 f4243e930678f0d343dc15907bc6bad3 122 Pfam PF07007 Lysozyme inhibitor LprI 22 102 7.4E-13 T 11-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal IX88_07500 b337cf1b1720a711849262fc0cba34f4 82 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 35 72 4.2E-7 T 11-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger IX88_16780 44652652a02b57f9434b46a72eeffe96 186 SUPERFAMILY SSF52218 5 184 1.31E-40 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_16780 44652652a02b57f9434b46a72eeffe96 186 Gene3D G3DSA:3.40.50.360 1 185 1.3E-55 T 11-10-2018 IPR029039 Flavoprotein-like superfamily IX88_16780 44652652a02b57f9434b46a72eeffe96 186 Pfam PF12724 Flavodoxin domain 8 77 2.8E-8 T 11-10-2018 IPR026816 Flavodoxin domain IX88_13300 825f9f3686093d195314e035f9f4e660 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 269 1.9E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 IX88_13300 825f9f3686093d195314e035f9f4e660 279 SUPERFAMILY SSF161098 77 261 1.83E-28 T 11-10-2018 IPR035906 MetI-like superfamily IX88_13300 825f9f3686093d195314e035f9f4e660 279 Gene3D G3DSA:1.10.3720.10 70 270 1.6E-22 T 11-10-2018 IPR035906 MetI-like superfamily IX88_16310 bfe77b28b64aac50fc4df7dde05fe012 176 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 49 162 2.3E-15 T 11-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 IX88_16310 bfe77b28b64aac50fc4df7dde05fe012 176 Pfam PF14534 Domain of unknown function (DUF4440) 47 155 1.2E-9 T 11-10-2018 IPR027843 Domain of unknown function DUF4440 IX88_16310 bfe77b28b64aac50fc4df7dde05fe012 176 Gene3D G3DSA:3.10.450.50 42 171 7.5E-26 T 11-10-2018 IX88_16310 bfe77b28b64aac50fc4df7dde05fe012 176 SUPERFAMILY SSF54427 35 171 1.37E-30 T 11-10-2018 IPR032710 NTF2-like domain superfamily IX88_13350 705f6f1a0446cc0ac80dc7196b65fd0c 415 Gene3D G3DSA:3.90.550.10 29 264 9.3E-44 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_13350 705f6f1a0446cc0ac80dc7196b65fd0c 415 Pfam PF13641 Glycosyltransferase like family 2 49 269 1.3E-37 T 11-10-2018 IX88_13350 705f6f1a0446cc0ac80dc7196b65fd0c 415 SUPERFAMILY SSF53448 49 317 1.88E-59 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_13350 705f6f1a0446cc0ac80dc7196b65fd0c 415 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 8 409 5.7E-175 T 11-10-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0043708 IX88_07100 45981ca568fb02a900b47954a09245f8 221 PIRSF PIRSF009467 5 221 1.3E-55 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 IX88_07100 45981ca568fb02a900b47954a09245f8 221 Pfam PF01730 UreF 40 179 9.9E-28 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 IX88_07100 45981ca568fb02a900b47954a09245f8 221 Hamap MF_01385 Urease accessory protein UreF [ureF]. 8 221 26.313 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 IX88_07100 45981ca568fb02a900b47954a09245f8 221 Gene3D G3DSA:1.10.4190.10 3 200 5.7E-44 T 11-10-2018 IPR038277 UreF domain superfamily IX88_16470 7a56839cb37b2b12e3d6432c3125c99a 320 SMART SM00849 82 290 8.6E-28 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_16470 7a56839cb37b2b12e3d6432c3125c99a 320 SUPERFAMILY SSF56281 24 303 2.1E-48 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_16470 7a56839cb37b2b12e3d6432c3125c99a 320 Gene3D G3DSA:3.60.15.10 26 316 2.8E-104 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IX88_16470 7a56839cb37b2b12e3d6432c3125c99a 320 Pfam PF00753 Metallo-beta-lactamase superfamily 81 274 5.2E-20 T 11-10-2018 IPR001279 Metallo-beta-lactamase IX88_07770 26d9ec9c99c27670b90f90f21503ed3f 583 SUPERFAMILY SSF53474 142 511 7.55E-14 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_07770 26d9ec9c99c27670b90f90f21503ed3f 583 Pfam PF07519 Tannase and feruloyl esterase 91 583 1.3E-155 T 11-10-2018 IPR011118 Tannase/feruloyl esterase MetaCyc: PWY-6784 IX88_02065 b5f18de6694a15006d6335bebabc483d 429 SUPERFAMILY SSF52833 241 422 8.27E-9 T 11-10-2018 IPR036249 Thioredoxin-like superfamily IX88_04865 28d973050975d47a64e240ffca298af3 243 Pfam PF12811 Bax inhibitor 1 like 5 240 3.4E-62 T 11-10-2018 IPR010539 Protein of unknown function UCP009160 IX88_04865 28d973050975d47a64e240ffca298af3 243 PIRSF PIRSF009160 1 243 1.6E-78 T 11-10-2018 IPR010539 Protein of unknown function UCP009160 IX88_14900 7c6286d1fc57ef45e904b7735fa677f7 444 TIGRFAM TIGR01555 phge_rel_HI1409: phage-associated protein, HI1409 family 17 410 4.0E-67 T 11-10-2018 IPR006445 Phage-associated protein HI1409 IX88_14900 7c6286d1fc57ef45e904b7735fa677f7 444 Pfam PF06381 Protein of unknown function (DUF1073) 44 386 1.3E-89 T 11-10-2018 IPR024459 Protein of unknown function DUF1073 IX88_13635 262ef57d35fbd74fd49fc573a7f0ffa5 235 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 42 214 1.5E-25 T 11-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component IX88_13635 262ef57d35fbd74fd49fc573a7f0ffa5 235 SUPERFAMILY SSF159594 39 221 2.88E-22 T 11-10-2018 IX88_14485 802b715bb426031fa538f3cf70321528 87 SUPERFAMILY SSF54862 5 73 3.3E-16 T 11-10-2018 IX88_14485 802b715bb426031fa538f3cf70321528 87 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IX88_14485 802b715bb426031fa538f3cf70321528 87 Gene3D G3DSA:3.30.70.20 2 81 8.2E-31 T 11-10-2018 IX88_04530 68d612ed3163dc2353eaabc79872b1e8 569 SUPERFAMILY SSF51735 425 559 1.07E-20 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily IX88_04530 68d612ed3163dc2353eaabc79872b1e8 569 Gene3D G3DSA:1.20.1530.20 4 399 1.5E-75 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily IX88_04530 68d612ed3163dc2353eaabc79872b1e8 569 Pfam PF02254 TrkA-N domain 429 542 1.5E-15 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 IX88_04530 68d612ed3163dc2353eaabc79872b1e8 569 Gene3D G3DSA:3.40.50.720 423 566 1.6E-24 T 11-10-2018 IX88_04530 68d612ed3163dc2353eaabc79872b1e8 569 Pfam PF00999 Sodium/hydrogen exchanger family 13 388 2.3E-70 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 IX88_10015 01b634651f0468fe76cd53995b4d80fc 168 Gene3D G3DSA:3.50.30.40 4 168 7.0E-63 T 11-10-2018 IX88_10015 01b634651f0468fe76cd53995b4d80fc 168 SUPERFAMILY SSF89562 26 167 7.33E-46 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily IX88_10015 01b634651f0468fe76cd53995b4d80fc 168 TIGRFAM TIGR01935 NOT-MenG: RraA family 9 162 1.3E-61 T 11-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 IX88_10015 01b634651f0468fe76cd53995b4d80fc 168 Pfam PF03737 Aldolase/RraA 8 162 2.9E-46 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein IX88_01795 baefcdcc8c3b2bf2f54a4265f2c13b18 608 Pfam PF05960 Bacterial protein of unknown function (DUF885) 67 597 4.8E-167 T 11-10-2018 IPR010281 Protein of unknown function DUF885 IX88_09380 c7d3005f19cda57d1357cb238b8d7c1e 277 Pfam PF03180 NLPA lipoprotein 39 270 4.4E-66 T 11-10-2018 IPR004872 Lipoprotein NlpA family IX88_09380 c7d3005f19cda57d1357cb238b8d7c1e 277 SUPERFAMILY SSF53850 39 272 9.51E-64 T 11-10-2018 IX88_09380 c7d3005f19cda57d1357cb238b8d7c1e 277 Gene3D G3DSA:3.40.190.10 42 267 3.5E-66 T 11-10-2018 IX88_09380 c7d3005f19cda57d1357cb238b8d7c1e 277 Gene3D G3DSA:3.40.190.10 119 224 3.5E-66 T 11-10-2018 IX88_00605 c93bb74531cc9a55f4125a8df060b330 333 Pfam PF16074 Type IV Pilus-assembly protein W 181 327 1.1E-11 T 11-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 IX88_00605 c93bb74531cc9a55f4125a8df060b330 333 SUPERFAMILY SSF54523 13 89 3.61E-5 T 11-10-2018 IX88_00605 c93bb74531cc9a55f4125a8df060b330 333 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 1.1E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_00605 c93bb74531cc9a55f4125a8df060b330 333 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 32 1.1E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_00605 c93bb74531cc9a55f4125a8df060b330 333 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site IX88_09440 fb08af057b57e54445f852f93c682786 249 Gene3D G3DSA:1.10.10.200 1 81 7.8E-35 T 11-10-2018 IPR017856 Integrase-like, N-terminal IX88_09440 fb08af057b57e54445f852f93c682786 249 Gene3D G3DSA:3.30.70.980 85 236 7.0E-53 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_09440 fb08af057b57e54445f852f93c682786 249 SUPERFAMILY SSF75625 3 246 6.41E-93 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_09440 fb08af057b57e54445f852f93c682786 249 Gene3D G3DSA:3.30.70.980 130 204 7.0E-53 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_09440 fb08af057b57e54445f852f93c682786 249 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 1.9E-96 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_09440 fb08af057b57e54445f852f93c682786 249 Pfam PF01709 Transcriptional regulator 5 237 4.2E-92 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_09440 fb08af057b57e54445f852f93c682786 249 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.052 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 IX88_08555 9d5ede923a7503c509078f3695fab9cd 310 Pfam PF13737 Transposase DDE domain 23 130 3.8E-41 T 11-10-2018 IPR025668 Transposase DDE domain IX88_01535 dc4d5af4db0ea7935988084be36c98ba 321 Gene3D G3DSA:3.20.20.370 14 320 4.7E-94 T 11-10-2018 IX88_01535 dc4d5af4db0ea7935988084be36c98ba 321 Pfam PF01522 Polysaccharide deacetylase 88 176 8.1E-6 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 IX88_01535 dc4d5af4db0ea7935988084be36c98ba 321 SUPERFAMILY SSF88713 20 318 2.22E-78 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 IX88_01535 dc4d5af4db0ea7935988084be36c98ba 321 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 20 318 2.3E-143 T 11-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 IX88_01350 1336ad353277041199f3ad81665ff539 352 SUPERFAMILY SSF51395 1 349 9.95E-113 T 11-10-2018 IX88_01350 1336ad353277041199f3ad81665ff539 352 Gene3D G3DSA:3.20.20.70 1 352 2.1E-131 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_01350 1336ad353277041199f3ad81665ff539 352 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 328 1.5E-81 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 IX88_13360 52a924a61543bdd02b659801db20ed29 812 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 6 812 2.3E-138 T 11-10-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:1901515 IX88_13360 52a924a61543bdd02b659801db20ed29 812 SUPERFAMILY SSF48452 21 212 3.54E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_13360 52a924a61543bdd02b659801db20ed29 812 SUPERFAMILY SSF48452 318 460 1.69E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_00085 6b4749b553a9c6e7b58a986eb72a906a 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 116 25.93 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00085 6b4749b553a9c6e7b58a986eb72a906a 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 116 3.3E-39 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 IX88_00085 6b4749b553a9c6e7b58a986eb72a906a 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 116 8.4E-41 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 IX88_00085 6b4749b553a9c6e7b58a986eb72a906a 116 Gene3D G3DSA:3.30.420.100 2 116 1.8E-40 T 11-10-2018 IX88_00085 6b4749b553a9c6e7b58a986eb72a906a 116 SUPERFAMILY SSF53137 4 114 2.4E-50 T 11-10-2018 IX88_06775 4e6b45b26c6764984c73944137313c97 274 SUPERFAMILY SSF53474 5 268 3.33E-56 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_06775 4e6b45b26c6764984c73944137313c97 274 Pfam PF12697 Alpha/beta hydrolase family 34 265 4.5E-20 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_06775 4e6b45b26c6764984c73944137313c97 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 4.9E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_06775 4e6b45b26c6764984c73944137313c97 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 231 4.9E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_06775 4e6b45b26c6764984c73944137313c97 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 4.9E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_06775 4e6b45b26c6764984c73944137313c97 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 4.9E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_06775 4e6b45b26c6764984c73944137313c97 274 Gene3D G3DSA:3.40.50.1820 4 273 1.9E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_01525 1f60164fef7b8678d4b01c6e39cbb8fa 181 Gene3D G3DSA:1.25.40.20 2 180 7.2E-16 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily IX88_01525 1f60164fef7b8678d4b01c6e39cbb8fa 181 SUPERFAMILY SSF48403 6 139 3.8E-10 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily IX88_04455 b57916d79c626ba7e8108f2088b5c35b 210 PIRSF PIRSF006324 1 209 2.3E-44 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_04455 b57916d79c626ba7e8108f2088b5c35b 210 Pfam PF01810 LysE type translocator 16 207 4.5E-28 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_03500 cae156a81874f5b33c61d03740003b97 301 Pfam PF00892 EamA-like transporter family 12 144 2.7E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_03500 cae156a81874f5b33c61d03740003b97 301 Pfam PF00892 EamA-like transporter family 162 296 7.8E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_03500 cae156a81874f5b33c61d03740003b97 301 SUPERFAMILY SSF103481 64 148 3.92E-5 T 11-10-2018 IX88_03500 cae156a81874f5b33c61d03740003b97 301 SUPERFAMILY SSF103481 202 299 6.15E-12 T 11-10-2018 IX88_13565 122d2e142bae5fc7cb0b1726ce0d08f6 164 Pfam PF16036 Chalcone isomerase-like 57 163 4.6E-10 T 11-10-2018 IPR016087 Chalcone isomerase GO:0016872 IX88_01115 8e97386d5685868cb2a49a6ef8424a80 247 SUPERFAMILY SSF48452 27 110 6.13E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_01920 93ffd7d047341d9596e920c2efbed39d 279 Gene3D G3DSA:1.20.1080.10 32 278 3.6E-35 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 IX88_01920 93ffd7d047341d9596e920c2efbed39d 279 Pfam PF01226 Formate/nitrite transporter 34 270 2.9E-40 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 IX88_03200 f1acbc9e5de2ac4dbb3f488cda3a654a 161 Pfam PF11158 Protein of unknown function (DUF2938) 11 157 3.9E-58 T 11-10-2018 IPR021329 Protein of unknown function DUF2938 IX88_09430 1fd72053a54afb144edbc8a7b78276f3 440 SUPERFAMILY SSF56935 89 440 1.92E-24 T 11-10-2018 IX88_04735 1eae928ea4374ed9894b62922c68a316 452 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 8 452 3.0E-148 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 IX88_04735 1eae928ea4374ed9894b62922c68a316 452 Pfam PF02447 GntP family permease 8 450 3.5E-159 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 IX88_04735 1eae928ea4374ed9894b62922c68a316 452 PIRSF PIRSF002746 4 452 1.2E-157 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 IX88_04420 c4142f10d04a3a3ab994f5575255a61d 420 Gene3D G3DSA:1.20.58.2200 357 419 5.0E-6 T 11-10-2018 IPR038440 FimV, C-terminal domain superfamily IX88_12830 b1645e79e1b88ddb1e7c7b519903d128 216 PIRSF PIRSF006324 2 216 2.2E-48 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_12830 b1645e79e1b88ddb1e7c7b519903d128 216 Pfam PF01810 LysE type translocator 17 214 1.3E-38 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_10715 c1d9d2a20988692702eccdd4ecab06ac 116 Gene3D G3DSA:1.10.10.10 1 115 1.1E-39 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_10715 c1d9d2a20988692702eccdd4ecab06ac 116 SUPERFAMILY SSF46785 5 105 4.08E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_10715 c1d9d2a20988692702eccdd4ecab06ac 116 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 86 3.9E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_16030 5e98c3b1c3079d2c0852e5ccced7fb2c 129 Pfam PF11304 Protein of unknown function (DUF3106) 39 89 1.2E-7 T 11-10-2018 IPR021455 Protein of unknown function DUF3106 IX88_05180 995b898a0845e9195d2c8603838984c6 416 SUPERFAMILY SSF103473 12 401 2.49E-32 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_05180 995b898a0845e9195d2c8603838984c6 416 Pfam PF05977 Transmembrane secretion effector 6 398 3.9E-26 T 11-10-2018 IPR010290 Transmembrane secretion effector IX88_05180 995b898a0845e9195d2c8603838984c6 416 Gene3D G3DSA:1.20.1250.20 10 401 1.2E-25 T 11-10-2018 IX88_06680 e11d66b30ad474a887c1203e0d6e17c5 332 Gene3D G3DSA:3.40.50.300 6 204 6.1E-48 T 11-10-2018 IX88_06680 e11d66b30ad474a887c1203e0d6e17c5 332 SUPERFAMILY SSF52540 10 179 9.71E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_06680 e11d66b30ad474a887c1203e0d6e17c5 332 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 10 179 1.7E-41 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain IX88_11080 aa1bfdbbc8ad5d318df3f7e0b88b7072 497 SUPERFAMILY SSF51690 189 494 8.71E-36 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 IX88_11080 aa1bfdbbc8ad5d318df3f7e0b88b7072 497 PIRSF PIRSF005943 1 497 8.5E-176 T 11-10-2018 IPR016471 Nicotinamide phosphoribosyl transferase Reactome: R-HSA-1368108|Reactome: R-HSA-197264 IX88_11080 aa1bfdbbc8ad5d318df3f7e0b88b7072 497 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 189 463 1.9E-42 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 IX88_11080 aa1bfdbbc8ad5d318df3f7e0b88b7072 497 Gene3D G3DSA:3.20.20.70 154 420 5.3E-95 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 IX88_09700 c1cc203bbbdd42088e68a82bef1052ad 226 Pfam PF06912 Protein of unknown function (DUF1275) 14 208 2.4E-31 T 11-10-2018 IPR010699 Protein of unknown function DUF1275 IX88_13270 f13755ab50d3f26ec5a8a3d2ebdd0d5d 192 Gene3D G3DSA:2.30.110.10 1 191 1.4E-49 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 IX88_13270 f13755ab50d3f26ec5a8a3d2ebdd0d5d 192 Pfam PF01613 Flavin reductase like domain 21 160 1.3E-17 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 IX88_13270 f13755ab50d3f26ec5a8a3d2ebdd0d5d 192 SUPERFAMILY SSF50475 6 188 8.34E-39 T 11-10-2018 IX88_13270 f13755ab50d3f26ec5a8a3d2ebdd0d5d 192 SMART SM00903 16 158 3.2E-15 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 IX88_03920 bb05e2f9b92ccca881ef787c9f74567b 304 SUPERFAMILY SSF103481 41 138 3.66E-10 T 11-10-2018 IX88_03920 bb05e2f9b92ccca881ef787c9f74567b 304 Pfam PF00892 EamA-like transporter family 151 282 1.7E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_03920 bb05e2f9b92ccca881ef787c9f74567b 304 Pfam PF00892 EamA-like transporter family 7 138 6.6E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_09765 f4353aaf6d9ee37ff6c8f8b21f7bfc25 229 Gene3D G3DSA:3.90.550.10 1 226 1.2E-57 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_09765 f4353aaf6d9ee37ff6c8f8b21f7bfc25 229 Pfam PF00483 Nucleotidyl transferase 2 138 1.8E-18 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 IX88_09765 f4353aaf6d9ee37ff6c8f8b21f7bfc25 229 SUPERFAMILY SSF53448 1 223 8.79E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases IX88_04480 eb3a5a23db1ce8c14d5c83e580eb818b 125 SUPERFAMILY SSF46785 13 115 1.95E-35 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_04480 eb3a5a23db1ce8c14d5c83e580eb818b 125 Pfam PF01638 HxlR-like helix-turn-helix 23 112 2.6E-37 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type IX88_04480 eb3a5a23db1ce8c14d5c83e580eb818b 125 Gene3D G3DSA:1.10.10.10 1 118 1.3E-40 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_11705 2137868b5d6ec159d7c739cb16f2dbd5 305 SUPERFAMILY SSF53474 3 300 1.77E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_11705 2137868b5d6ec159d7c739cb16f2dbd5 305 Gene3D G3DSA:3.40.50.1820 2 300 5.2E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_11705 2137868b5d6ec159d7c739cb16f2dbd5 305 Pfam PF12697 Alpha/beta hydrolase family 23 289 2.8E-16 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_17260 33c7dbfb88aff45051df9734550c654d 127 SUPERFAMILY SSF52172 6 126 1.71E-38 T 11-10-2018 IPR011006 CheY-like superfamily IX88_17260 33c7dbfb88aff45051df9734550c654d 127 Gene3D G3DSA:3.40.50.12740 7 127 9.0E-41 T 11-10-2018 IX88_17260 33c7dbfb88aff45051df9734550c654d 127 Pfam PF00072 Response regulator receiver domain 10 122 5.3E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_17260 33c7dbfb88aff45051df9734550c654d 127 SMART SM00448 8 121 8.2E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 IX88_15275 e213d62fea216f24c5b3f1f3d7c8450e 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.8E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_15275 e213d62fea216f24c5b3f1f3d7c8450e 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.8E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_15275 e213d62fea216f24c5b3f1f3d7c8450e 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 57 3.0E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 IX88_15275 e213d62fea216f24c5b3f1f3d7c8450e 187 SUPERFAMILY SSF46689 13 69 4.1E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 IX88_15275 e213d62fea216f24c5b3f1f3d7c8450e 187 Gene3D G3DSA:1.10.357.10 7 184 5.8E-19 T 11-10-2018 IX88_03950 1fb12965cceb24b5f329f40d520a3168 109 Pfam PF03840 Preprotein translocase SecG subunit 4 72 1.2E-21 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 IX88_03950 1fb12965cceb24b5f329f40d520a3168 109 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 8.0E-36 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 IX88_03950 1fb12965cceb24b5f329f40d520a3168 109 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 8.0E-36 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 IX88_03950 1fb12965cceb24b5f329f40d520a3168 109 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 8.0E-36 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 IX88_03950 1fb12965cceb24b5f329f40d520a3168 109 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 8.0E-36 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 IX88_03950 1fb12965cceb24b5f329f40d520a3168 109 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 6.9E-26 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 IX88_16740 4a66592669a75df779e26d24dd0545d0 174 Pfam PF03695 Uncharacterised protein family (UPF0149) 7 170 1.3E-20 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 IX88_16740 4a66592669a75df779e26d24dd0545d0 174 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 6 169 4.0E-22 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 IX88_16740 4a66592669a75df779e26d24dd0545d0 174 Gene3D G3DSA:1.20.120.740 3 164 1.6E-6 T 11-10-2018 IX88_16740 4a66592669a75df779e26d24dd0545d0 174 SUPERFAMILY SSF101327 4 172 2.48E-24 T 11-10-2018 IPR036255 YgfB-like superfamily IX88_12475 d4a204eab0dc37fb97dd6f645b00cbf7 118 Pfam PF12949 HeH/LEM domain 86 114 9.2E-8 T 11-10-2018 IPR025856 HeH/LEM domain IX88_12475 d4a204eab0dc37fb97dd6f645b00cbf7 118 Gene3D G3DSA:1.20.890.90 85 118 1.1E-7 T 11-10-2018 IX88_10045 e08ddcfead8664273f0177d5795b59d4 489 SMART SM00044 191 388 3.6E-15 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 IX88_10045 e08ddcfead8664273f0177d5795b59d4 489 Gene3D G3DSA:3.30.70.1230 218 412 4.0E-64 T 11-10-2018 IPR029787 Nucleotide cyclase IX88_10045 e08ddcfead8664273f0177d5795b59d4 489 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 224 407 5.3E-34 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 IX88_10045 e08ddcfead8664273f0177d5795b59d4 489 SUPERFAMILY SSF55073 223 407 3.61E-54 T 11-10-2018 IPR029787 Nucleotide cyclase IX88_13790 82c1069434920973722f3b1f795e8b97 77 Pfam PF09939 Uncharacterized protein conserved in bacteria (DUF2171) 9 70 1.9E-23 T 11-10-2018 IPR018684 Protein of unknown function DUF2171 IX88_17220 f367a137de28079dd5a2075843d2bbdc 302 Pfam PF08907 Domain of unknown function (DUF1853) 23 280 8.1E-46 T 11-10-2018 IPR015003 Protein of unknown function DUF1853 IX88_06615 7d04960249300bc38d1fdda31d8b8e79 637 Pfam PF12697 Alpha/beta hydrolase family 362 620 5.9E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 IX88_06615 7d04960249300bc38d1fdda31d8b8e79 637 SUPERFAMILY SSF53474 356 614 6.01E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_06615 7d04960249300bc38d1fdda31d8b8e79 637 Gene3D G3DSA:3.40.50.1820 354 608 1.2E-26 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_14350 994b70f59369ce3e1e754f976f4db8d4 257 Pfam PF03883 Peroxide stress protein YaaA 1 243 1.2E-90 T 11-10-2018 IPR005583 Peroxide stress protein YaaA IX88_14350 994b70f59369ce3e1e754f976f4db8d4 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.104 T 11-10-2018 IPR005583 Peroxide stress protein YaaA IX88_13055 27b94dac2957c1a8425049742fc6980f 478 Pfam PF13520 Amino acid permease 41 447 8.3E-40 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_13055 27b94dac2957c1a8425049742fc6980f 478 PIRSF PIRSF006060 11 477 2.8E-71 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_13055 27b94dac2957c1a8425049742fc6980f 478 TIGRFAM TIGR00908 2A0305: ethanolamine permease 24 467 3.6E-177 T 11-10-2018 IPR004757 Ethanolamine permease IX88_13055 27b94dac2957c1a8425049742fc6980f 478 Gene3D G3DSA:1.20.1740.10 26 472 1.5E-55 T 11-10-2018 IX88_04610 30f1640821448bde81816c04bbeb2954 259 Pfam PF05742 Transport and Golgi organisation 2 1 233 9.1E-57 T 11-10-2018 IPR008551 Transport and Golgi organisation protein 2 IX88_03775 ca43ca25c3bd9213c4f95aee7c98d6b4 193 Pfam PF03922 OmpW family 19 193 1.4E-31 T 11-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 IX88_03775 ca43ca25c3bd9213c4f95aee7c98d6b4 193 SUPERFAMILY SSF56925 19 193 1.26E-20 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IX88_03775 ca43ca25c3bd9213c4f95aee7c98d6b4 193 Gene3D G3DSA:2.40.160.20 18 193 4.7E-36 T 11-10-2018 IX88_09160 ea49bf00229ae9d96dbc0372fbb0df8b 394 SUPERFAMILY SSF56935 32 316 7.87E-8 T 11-10-2018 IX88_08235 8baff61d179376483d0ac896bf6357e1 205 PIRSF PIRSF006324 1 205 4.1E-52 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_08235 8baff61d179376483d0ac896bf6357e1 205 Pfam PF01810 LysE type translocator 15 204 1.2E-31 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_09580 30cc1d2cf0f6a72c7038b691dc96dbdf 181 Gene3D G3DSA:3.40.630.30 2 181 5.9E-54 T 11-10-2018 IX88_09580 30cc1d2cf0f6a72c7038b691dc96dbdf 181 SUPERFAMILY SSF55729 17 173 2.83E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase IX88_09580 30cc1d2cf0f6a72c7038b691dc96dbdf 181 Pfam PF13420 Acetyltransferase (GNAT) domain 21 165 6.2E-20 T 11-10-2018 IX88_06595 d2e686c852b5d3052b9e120dd64bb2e7 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 7.6E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 IX88_06595 d2e686c852b5d3052b9e120dd64bb2e7 296 Gene3D G3DSA:1.10.10.10 1 88 1.1E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily IX88_06595 d2e686c852b5d3052b9e120dd64bb2e7 296 SUPERFAMILY SSF53850 86 293 2.35E-27 T 11-10-2018 IX88_06595 d2e686c852b5d3052b9e120dd64bb2e7 296 SUPERFAMILY SSF46785 1 83 2.95E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily IX88_06595 d2e686c852b5d3052b9e120dd64bb2e7 296 Pfam PF03466 LysR substrate binding domain 89 291 2.5E-27 T 11-10-2018 IPR005119 LysR, substrate-binding IX88_06595 d2e686c852b5d3052b9e120dd64bb2e7 296 Gene3D G3DSA:3.40.190.290 91 293 6.1E-34 T 11-10-2018 IX88_12480 482658941528c3e178f1a31929d82c11 316 SUPERFAMILY SSF56563 44 254 4.18E-6 T 11-10-2018 IX88_14600 07964b3cd0b585377fcdb0db7ae3da25 161 Pfam PF11948 Protein of unknown function (DUF3465) 47 161 7.3E-52 T 11-10-2018 IPR021856 Protein of unknown function DUF3465 IX88_11205 bb81a092abd5461e9ba131e7b638e7b1 145 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 141 3.7E-33 T 11-10-2018 IPR006750 Putative inner membrane exporter, YdcZ IX88_12490 ded8c061eca3ed340f9286ba9ba7292d 104 Pfam PF13876 Phage protein (N4 Gp49/phage Sf6 gene 66) family 19 99 2.5E-18 T 11-10-2018 IPR025915 Phage protein (N4 Gp49/phage Sf6 gene 66) family IX88_01620 ec8be2e0b23a0f00edb4e488b82325f5 246 Pfam PF07007 Lysozyme inhibitor LprI 37 106 1.4E-5 T 11-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal IX88_01620 ec8be2e0b23a0f00edb4e488b82325f5 246 Gene3D G3DSA:1.20.1270.180 33 115 1.1E-5 T 11-10-2018 IX88_03995 ea73120338ba1eb027d06a8d8a790fe6 134 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 11 96 3.1E-25 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 IX88_03995 ea73120338ba1eb027d06a8d8a790fe6 134 Pfam PF03334 Na+/H+ antiporter subunit 12 91 6.7E-25 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 IX88_05865 78d54a99f3eb3e2f99f1d2678a4b004c 547 Gene3D G3DSA:1.20.1250.20 33 228 3.6E-17 T 11-10-2018 IX88_05865 78d54a99f3eb3e2f99f1d2678a4b004c 547 Pfam PF07690 Major Facilitator Superfamily 44 439 2.0E-15 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_05865 78d54a99f3eb3e2f99f1d2678a4b004c 547 SUPERFAMILY SSF103473 25 449 3.92E-22 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_07470 974e633410218d7a507d8a813f9ecc21 346 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 6 342 2.3E-118 T 11-10-2018 IPR017686 Phage/plasmid-like protein IX88_07470 974e633410218d7a507d8a813f9ecc21 346 Pfam PF06067 Domain of unknown function (DUF932) 77 326 4.7E-78 T 11-10-2018 IPR026325 Protein of unknown function DUF932 IX88_02950 12a074a44e2e5f9d44e39444b4e5772c 409 Pfam PF04286 Protein of unknown function (DUF445) 223 342 6.0E-10 T 11-10-2018 IPR007383 Protein of unknown function DUF445 IX88_14580 b5d36e19931aa385390f9aaaf3e7333b 150 Pfam PF06127 Protein of unknown function (DUF962) 1 135 1.3E-21 T 11-10-2018 IPR009305 Protein of unknown function DUF962 IX88_12980 8b1718951acb83292a8b3b6b7b956456 339 Pfam PF05229 Spore Coat Protein U domain 194 336 4.9E-27 T 11-10-2018 IPR007893 Spore coat protein U IX88_12980 8b1718951acb83292a8b3b6b7b956456 339 SMART SM00972 270 336 2.0E-21 T 11-10-2018 IPR007893 Spore coat protein U IX88_11790 092ba071f8a363d17196d6028c745b28 102 Pfam PF00355 Rieske [2Fe-2S] domain 2 83 5.8E-14 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 IX88_11790 092ba071f8a363d17196d6028c745b28 102 Gene3D G3DSA:2.102.10.10 1 102 3.4E-17 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_11790 092ba071f8a363d17196d6028c745b28 102 SUPERFAMILY SSF50022 3 100 2.88E-22 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 IX88_02970 547a4d3dca2683004a41c1b14c67fea6 101 Gene3D G3DSA:1.10.225.20 1 95 1.2E-32 T 11-10-2018 IX88_02970 547a4d3dca2683004a41c1b14c67fea6 101 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 4 94 3.2E-35 T 11-10-2018 IPR024476 Protein of unknown function DUF3861 IX88_13265 901f83bcd9fa22296a3ee994efc19b92 258 Gene3D G3DSA:3.40.50.720 12 258 1.6E-82 T 11-10-2018 IX88_13265 901f83bcd9fa22296a3ee994efc19b92 258 SUPERFAMILY SSF69572 8 256 4.19E-84 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 IX88_13265 901f83bcd9fa22296a3ee994efc19b92 258 Pfam PF00899 ThiF family 20 252 2.8E-66 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 IX88_06950 fdf143f134c955659c6eaaf8030e2351 819 Pfam PF02687 FtsX-like permease family 721 806 5.8E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 IX88_08095 7271032e79940c6c55d7ad388d9d6694 71 Pfam PF13619 KTSC domain 6 56 5.0E-8 T 11-10-2018 IPR025309 KTSC domain IX88_03260 32efb943c3f746edeb0bda59850251ae 214 Pfam PF03458 UPF0126 domain 5 79 6.1E-20 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 IX88_03260 32efb943c3f746edeb0bda59850251ae 214 Pfam PF03458 UPF0126 domain 91 163 8.8E-20 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 IX88_17820 cca92138d64662a988dfafe172a4c9d0 140 Pfam PF03061 Thioesterase superfamily 27 99 5.3E-16 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 IX88_17820 cca92138d64662a988dfafe172a4c9d0 140 SUPERFAMILY SSF54637 8 130 9.46E-33 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_17820 cca92138d64662a988dfafe172a4c9d0 140 Gene3D G3DSA:3.10.129.10 1 140 5.5E-37 T 11-10-2018 IX88_14275 687d6d3e64d2ff30c55b9f5861ee662d 141 SMART SM00465 45 115 4.2E-6 T 11-10-2018 IPR000305 GIY-YIG endonuclease IX88_14275 687d6d3e64d2ff30c55b9f5861ee662d 141 SUPERFAMILY SSF82771 47 115 4.84E-6 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 IX88_12385 b6439e5694a3af3bf5148d87dab60366 114 Pfam PF05939 Phage minor tail protein 6 112 8.1E-27 T 11-10-2018 IPR010265 Bacteriophage lambda, GpM, minor tail IX88_08175 77866fa4b02f2b75a03a2f1e1797accd 118 Gene3D G3DSA:1.20.1270.360 12 118 6.6E-26 T 11-10-2018 IX88_08175 77866fa4b02f2b75a03a2f1e1797accd 118 Pfam PF03860 Domain of Unknown Function (DUF326) 96 115 2.1E-5 T 11-10-2018 IPR005560 Protein of unknown function DUF326 IX88_01240 fb48a58f76d4389279e681fd14bc59b3 117 Pfam PF06993 Protein of unknown function (DUF1304) 8 114 9.7E-42 T 11-10-2018 IPR009732 Protein of unknown function DUF1304 IX88_13365 6e53caea8e54276eb270c902e01edf29 278 Pfam PF03618 Kinase/pyrophosphorylase 11 268 3.4E-76 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 IX88_13365 6e53caea8e54276eb270c902e01edf29 278 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 8 277 76.035 T 11-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein IX88_10535 050af54a43a62432e522a798070eb295 449 PIRSF PIRSF004810 1 449 2.9E-130 T 11-10-2018 IPR014047 Chromate transporter, long chain IX88_10535 050af54a43a62432e522a798070eb295 449 Pfam PF02417 Chromate transporter 259 443 2.2E-32 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 IX88_10535 050af54a43a62432e522a798070eb295 449 Pfam PF02417 Chromate transporter 19 183 4.0E-37 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 IX88_10535 050af54a43a62432e522a798070eb295 449 TIGRFAM TIGR00937 2A51: chromate efflux transporter 26 443 3.9E-73 T 11-10-2018 IPR014047 Chromate transporter, long chain IX88_17020 2dd7dbd01b44a9abcc3b1368837c6c88 330 Pfam PF00487 Fatty acid desaturase 55 305 1.8E-36 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 IX88_01120 529da95ac38a0c3bccf875d1d4e0e4ca 295 SUPERFAMILY SSF103481 192 292 2.75E-15 T 11-10-2018 IX88_01120 529da95ac38a0c3bccf875d1d4e0e4ca 295 Pfam PF00892 EamA-like transporter family 157 289 4.5E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_01120 529da95ac38a0c3bccf875d1d4e0e4ca 295 Pfam PF00892 EamA-like transporter family 6 149 3.8E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 IX88_01120 529da95ac38a0c3bccf875d1d4e0e4ca 295 SUPERFAMILY SSF103481 45 152 6.47E-8 T 11-10-2018 IX88_06560 c200f1068c81ef479ee98c01b45874b6 207 Pfam PF01844 HNH endonuclease 133 188 1.9E-5 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 IX88_03210 5b52e4c4b3b9b8452566dcf000f635cc 419 Pfam PF13449 Esterase-like activity of phytase 74 393 3.5E-56 T 11-10-2018 IPR027372 Phytase-like domain IX88_08500 c742362c26093a31092864eeb9a41be9 410 Pfam PF01566 Natural resistance-associated macrophage protein 44 376 1.3E-24 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 IX88_05355 c168c3d3bbbc3fbb8c823d63584cc2b1 112 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 100 5.1E-18 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 IX88_05355 c168c3d3bbbc3fbb8c823d63584cc2b1 112 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 102 3.9E-23 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 IX88_05355 c168c3d3bbbc3fbb8c823d63584cc2b1 112 Gene3D G3DSA:3.30.160.100 1 109 4.2E-26 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like IX88_05355 c168c3d3bbbc3fbb8c823d63584cc2b1 112 SUPERFAMILY SSF69754 1 102 1.57E-23 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like IX88_04325 af47ae6c0749ff28be8252099d4de784 225 Pfam PF07077 Protein of unknown function (DUF1345) 40 214 9.9E-60 T 11-10-2018 IPR009781 Protein of unknown function DUF1345 IX88_01880 6575a5c25001a27e3f347e3bc0055532 157 Pfam PF04463 Protein of unknown function (DUF523) 3 146 7.7E-40 T 11-10-2018 IPR007553 Domain of unknown function DUF523 IX88_04580 a216c8b098c9eea72b4dc04eb9012f74 351 Pfam PF13387 Domain of unknown function (DUF4105) 137 289 1.1E-44 T 11-10-2018 IPR025178 Domain of unknown function DUF4105 IX88_04615 a7220e13b5f5ca6741deaa632eb058ae 777 Pfam PF05787 Bacterial protein of unknown function (DUF839) 372 733 6.6E-87 T 11-10-2018 IPR008557 Protein of unknown function DUF839 IX88_04615 a7220e13b5f5ca6741deaa632eb058ae 777 Pfam PF05787 Bacterial protein of unknown function (DUF839) 83 309 1.2E-48 T 11-10-2018 IPR008557 Protein of unknown function DUF839 IX88_04615 a7220e13b5f5ca6741deaa632eb058ae 777 SUPERFAMILY SSF63829 537 736 7.85E-5 T 11-10-2018 IX88_08115 19f6db8edf9b3ea450e19b5343696850 420 Gene3D G3DSA:2.40.160.10 30 420 1.8E-139 T 11-10-2018 IPR023614 Porin domain superfamily IX88_08115 19f6db8edf9b3ea450e19b5343696850 420 Pfam PF03573 outer membrane porin, OprD family 38 419 3.7E-73 T 11-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 IX88_14830 b319a25fe8a87325e11bfa737b5c4f7c 101 Pfam PF05154 TM2 domain 36 86 3.9E-17 T 11-10-2018 IPR007829 TM2 domain IX88_03220 a32769a0a376c4dc1c5e9727aba51099 166 Pfam PF10881 Protein of unknown function (DUF2726) 34 140 2.7E-11 T 11-10-2018 IPR024402 Domain of unknown function DUF2726 IX88_13645 8f11010e058345ed2961dbf5e2636197 268 Pfam PF04403 Paraquat-inducible protein A 72 232 9.1E-52 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like IX88_15660 ee8c9c5f7fb59695833cd685539cce25 381 SUPERFAMILY SSF48452 33 115 1.16E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_15660 ee8c9c5f7fb59695833cd685539cce25 381 Gene3D G3DSA:1.25.40.10 29 144 1.1E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 IX88_17035 539b258056dd5ccc491c5c7765af42f4 476 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 42 476 8.8E-18 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) IX88_17035 539b258056dd5ccc491c5c7765af42f4 476 Gene3D G3DSA:2.40.160.60 170 476 1.1E-23 T 11-10-2018 IX88_17035 539b258056dd5ccc491c5c7765af42f4 476 SUPERFAMILY SSF56935 14 476 2.66E-55 T 11-10-2018 IX88_04805 44759ce7ad41423383be5f01294425bd 263 Pfam PF13413 Helix-turn-helix domain 29 89 3.0E-18 T 11-10-2018 IX88_04805 44759ce7ad41423383be5f01294425bd 263 Pfam PF13464 Domain of unknown function (DUF4115) 190 261 3.1E-11 T 11-10-2018 IPR025194 Domain of unknown function DUF4115 IX88_04805 44759ce7ad41423383be5f01294425bd 263 Gene3D G3DSA:1.10.260.40 18 105 3.9E-22 T 11-10-2018 IX88_01025 e18a76e1da189c4da4eab7d5e96b1d5e 199 Pfam PF01810 LysE type translocator 11 196 2.2E-22 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_05840 7d55f80f3d1d30cd2516deebfc25e900 558 Pfam PF05552 Conserved TM helix 25 56 1.5E-7 T 11-10-2018 IPR008910 Conserved TM helix IX88_05840 7d55f80f3d1d30cd2516deebfc25e900 558 Pfam PF05552 Conserved TM helix 282 330 7.3E-16 T 11-10-2018 IPR008910 Conserved TM helix IX88_05840 7d55f80f3d1d30cd2516deebfc25e900 558 Pfam PF05552 Conserved TM helix 191 236 3.1E-13 T 11-10-2018 IPR008910 Conserved TM helix IX88_05840 7d55f80f3d1d30cd2516deebfc25e900 558 Pfam PF05552 Conserved TM helix 101 148 7.9E-18 T 11-10-2018 IPR008910 Conserved TM helix IX88_18200 34ebe4edd1c2323d2ae6fdea820b3e3c 69 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 47 3.0E-17 T 11-10-2018 IPR012658 Conserved hypothetical protein CHP02443 IX88_18200 34ebe4edd1c2323d2ae6fdea820b3e3c 69 Pfam PF09526 Probable metal-binding protein (DUF2387) 1 45 1.1E-17 T 11-10-2018 IPR012658 Conserved hypothetical protein CHP02443 IX88_05010 d48031d89736d7777b0acd4f080c9a23 219 TIGRFAM TIGR02646 TIGR02646: TIGR02646 family protein 32 162 6.8E-28 T 11-10-2018 IPR013467 Conserved hypothetical protein CHP02646 IX88_02435 3e82d7e37355ed57460864b00d8b6ae9 188 Gene3D G3DSA:3.40.50.1580 1 187 5.8E-40 T 11-10-2018 IX88_02435 3e82d7e37355ed57460864b00d8b6ae9 188 Pfam PF01048 Phosphorylase superfamily 28 173 6.7E-18 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 IX88_02435 3e82d7e37355ed57460864b00d8b6ae9 188 SUPERFAMILY SSF53167 5 183 1.7E-35 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 IX88_17430 97058dc8f61f3f82980819c961903f5d 417 Pfam PF04966 Carbohydrate-selective porin, OprB family 75 417 2.0E-85 T 11-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 IX88_17430 97058dc8f61f3f82980819c961903f5d 417 Gene3D G3DSA:2.40.160.180 30 417 4.4E-124 T 11-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily IX88_10680 5aaa4fd1b4cccb0441307e4831c09281 412 Gene3D G3DSA:3.50.50.60 4 322 4.4E-126 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_10680 5aaa4fd1b4cccb0441307e4831c09281 412 SUPERFAMILY SSF51905 2 355 1.32E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily IX88_10680 5aaa4fd1b4cccb0441307e4831c09281 412 Gene3D G3DSA:3.30.9.40 65 271 4.4E-126 T 11-10-2018 IX88_08195 fb1a7898df3d025ae35d32cd3ddf7617 64 Pfam PF02609 Exonuclease VII small subunit 15 59 4.0E-5 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 IX88_05700 c788367c123804ad622a80558c4be6f1 427 Pfam PF00268 Ribonucleotide reductase, small chain 108 395 4.8E-86 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IX88_05700 c788367c123804ad622a80558c4be6f1 427 Gene3D G3DSA:1.10.620.20 85 421 1.5E-110 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 IX88_05700 c788367c123804ad622a80558c4be6f1 427 SUPERFAMILY SSF47240 69 401 6.84E-98 T 11-10-2018 IPR009078 Ferritin-like superfamily IX88_05700 c788367c123804ad622a80558c4be6f1 427 PIRSF PIRSF000355 78 427 9.6E-139 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 IX88_18005 27be975e3ca4d30e23e4fb29a036858b 187 Pfam PF14066 Protein of unknown function (DUF4256) 15 187 8.3E-89 T 11-10-2018 IPR025352 Protein of unknown function DUF4256 IX88_05950 d862f606e66e33bfeb301b004ae4ca98 269 Pfam PF01578 Cytochrome C assembly protein 43 266 8.0E-23 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 IX88_17115 9e057be4f80b3158094d92f81cf3cc58 249 Pfam PF16142 Domain of unknown function (DUF4850) 59 243 4.2E-71 T 11-10-2018 IPR032322 Protein of unknown function DUF4850 IX88_16835 e2c503054cc84d702e50f90dc4084fd4 686 Pfam PF10136 Site-specific recombinase 26 665 6.2E-223 T 11-10-2018 IPR011385 Putative site-specific recombinase Gcr IX88_16835 e2c503054cc84d702e50f90dc4084fd4 686 PIRSF PIRSF015380 7 681 1.5E-166 T 11-10-2018 IPR011385 Putative site-specific recombinase Gcr IX88_05145 cd6cb6b64e1b3031016ace39538d86ba 89 Gene3D G3DSA:3.30.1340.10 1 88 1.3E-25 T 11-10-2018 IPR035895 HPr-like superfamily IX88_05145 cd6cb6b64e1b3031016ace39538d86ba 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.6E-11 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like IX88_05145 cd6cb6b64e1b3031016ace39538d86ba 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.6E-11 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like IX88_05145 cd6cb6b64e1b3031016ace39538d86ba 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.6E-11 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like IX88_05145 cd6cb6b64e1b3031016ace39538d86ba 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 1.6E-23 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like IX88_05145 cd6cb6b64e1b3031016ace39538d86ba 89 SUPERFAMILY SSF55594 1 87 3.93E-24 T 11-10-2018 IPR035895 HPr-like superfamily IX88_05145 cd6cb6b64e1b3031016ace39538d86ba 89 Pfam PF00381 PTS HPr component phosphorylation site 4 82 5.4E-23 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like IX88_18125 3dabfda8be41f6aa550803f38e38c720 415 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 19 278 6.7E-59 T 11-10-2018 IPR017039 Virulence factor BrkB IX88_18125 3dabfda8be41f6aa550803f38e38c720 415 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 2 302 21.268 T 11-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial IX88_18125 3dabfda8be41f6aa550803f38e38c720 415 Pfam PF03631 Virulence factor BrkB 30 277 3.9E-52 T 11-10-2018 IPR017039 Virulence factor BrkB IX88_03020 0cbe4a2b70ca4a7b9ff763ac90564710 262 SMART SM00382 38 213 9.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain IX88_03020 0cbe4a2b70ca4a7b9ff763ac90564710 262 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 IX88_03020 0cbe4a2b70ca4a7b9ff763ac90564710 262 SUPERFAMILY SSF52540 7 225 1.23E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase IX88_03020 0cbe4a2b70ca4a7b9ff763ac90564710 262 Pfam PF00005 ABC transporter 29 156 2.3E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 IX88_03020 0cbe4a2b70ca4a7b9ff763ac90564710 262 Gene3D G3DSA:3.40.50.300 7 241 2.0E-56 T 11-10-2018 IX88_04895 408b539d66d6995f5d47ab2588f64915 169 Gene3D G3DSA:3.30.160.150 28 169 1.0E-41 T 11-10-2018 IX88_04895 408b539d66d6995f5d47ab2588f64915 169 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 8 164 21.455 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 IX88_14570 da3b9029602688f98b9b0d81e32faba1 333 Gene3D G3DSA:1.10.8.350 43 209 9.2E-94 T 11-10-2018 IX88_14570 da3b9029602688f98b9b0d81e32faba1 333 Pfam PF13406 Transglycosylase SLT domain 37 327 1.5E-87 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 IX88_14570 da3b9029602688f98b9b0d81e32faba1 333 Gene3D G3DSA:1.10.530.10 76 327 9.2E-94 T 11-10-2018 IX88_14570 da3b9029602688f98b9b0d81e32faba1 333 SUPERFAMILY SSF53955 24 331 7.12E-80 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily IX88_14570 da3b9029602688f98b9b0d81e32faba1 333 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 40 330 1.1E-92 T 11-10-2018 IPR011757 Lytic transglycosylase MltB IX88_14130 b79cd20e53b690a3737f243db27af1ec 133 Gene3D G3DSA:3.40.960.10 27 132 3.2E-8 T 11-10-2018 IX88_04470 40c29e74cb904c1201c9d3e2672d1e03 81 Pfam PF04102 SlyX 16 81 1.1E-16 T 11-10-2018 IPR007236 SlyX IX88_13195 fa6ff2018c6d46dbc181d4cc7b367b7f 1501 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1154 1501 3.0E-43 T 11-10-2018 IPR007452 Translocation and assembly module TamB IX88_00345 f6d293809497219506445a621fa187f8 265 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 8 261 1.1E-77 T 11-10-2018 IPR023875 DNA metabolism protein, putative IX88_00345 f6d293809497219506445a621fa187f8 265 Pfam PF13566 Domain of unknown function (DUF4130 89 260 7.5E-48 T 11-10-2018 IPR025404 Domain of unknown function DUF4130 IX88_09335 2bdbd0ada3ce18a0ce83d87f4cfcde02 113 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 107 2.0E-9 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD IX88_11795 799214d38105eada0c8109c6f6381a78 202 Pfam PF07290 Protein of unknown function (DUF1449) 11 191 3.9E-21 T 11-10-2018 IPR010840 Protein of unknown function DUF1449 IX88_17475 538af989040497648d98dec0a3e93cda 209 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 9 208 1.1E-59 T 11-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 IX88_17475 538af989040497648d98dec0a3e93cda 209 Pfam PF03006 Haemolysin-III related 8 201 8.9E-34 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 IX88_00815 ab16b96b119c51b8d6264bb94ac29492 472 PIRSF PIRSF006060 1 472 2.6E-72 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 IX88_00815 ab16b96b119c51b8d6264bb94ac29492 472 ProSitePatterns PS00218 Amino acid permeases signature. 52 83 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 IX88_00815 ab16b96b119c51b8d6264bb94ac29492 472 Gene3D G3DSA:1.20.1740.10 19 472 1.7E-62 T 11-10-2018 IX88_00815 ab16b96b119c51b8d6264bb94ac29492 472 Pfam PF00324 Amino acid permease 27 470 3.1E-118 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 IX88_11580 dc9984d76726f83180f4ad90c9782145 439 Pfam PF04966 Carbohydrate-selective porin, OprB family 71 439 3.1E-93 T 11-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 IX88_11580 dc9984d76726f83180f4ad90c9782145 439 Gene3D G3DSA:2.40.160.180 26 439 6.8E-121 T 11-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily IX88_03875 747331f17f13c8b589ee0c394c9ca312 699 Pfam PF04632 Fusaric acid resistance protein family 15 678 1.1E-146 T 11-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 IX88_17720 9105020098e32caca36e0daf7c3f8b48 243 Pfam PF15956 Domain of unknown function (DUF4760) 118 242 3.8E-10 T 11-10-2018 IPR031876 Protein of unknown function DUF4760 IX88_16630 e320fbc3a5edc9cedc23a179a6e581d8 238 SUPERFAMILY SSF55486 152 235 2.1E-6 T 11-10-2018 IX88_08065 0c88c4a610245b5f2c5c9db8cafbdb51 812 Gene3D G3DSA:3.60.10.10 464 777 6.1E-38 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily IX88_08065 0c88c4a610245b5f2c5c9db8cafbdb51 812 SUPERFAMILY SSF56219 463 778 6.19E-30 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily IX88_08065 0c88c4a610245b5f2c5c9db8cafbdb51 812 Pfam PF00932 Lamin Tail Domain 24 129 3.6E-12 T 11-10-2018 IPR001322 Lamin tail domain IX88_03740 7eeb1f0887de035087ff73c7a0f1a7bd 153 Pfam PF04986 Putative transposase 1 49 1.9E-14 T 11-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 IX88_11560 74fe0c41f0dc9557fdb8ed23268f225c 137 Pfam PF04143 Sulphur transport 33 130 8.1E-8 T 11-10-2018 IPR007272 Sulphur transport domain IX88_14660 e55dad855ebb167e1ab4d6eb90a8ca01 178 Pfam PF03412 Peptidase C39 family 13 66 8.8E-8 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 IX88_17110 3b23d765b325732afc229adf0c6a3d3c 355 Pfam PF06674 Protein of unknown function (DUF1176) 26 348 5.8E-97 T 11-10-2018 IPR009560 Protein of unknown function DUF1176 IX88_11830 3f471c77266e022196a1b8b208114487 223 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 217 3.6E-30 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 IX88_16145 218b0e2fd4f3ffda6a53d46e4b121c99 126 Pfam PF04138 GtrA-like protein 10 124 9.2E-15 T 11-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 IX88_05970 9819843023def0a24d2bf4ae5ea9b534 267 Pfam PF01925 Sulfite exporter TauE/SafE 7 259 7.0E-53 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 IX88_04620 27022b24f4e4013c49a03ff6d027a416 726 Pfam PF05787 Bacterial protein of unknown function (DUF839) 211 670 5.1E-17 T 11-10-2018 IPR008557 Protein of unknown function DUF839 IX88_03565 8ebdb7a5405647c9b513a8065ded5574 247 Pfam PF01203 Type II secretion system (T2SS), protein N 41 211 1.3E-14 T 11-10-2018 IPR022792 Type II secretion system, protein N IX88_14150 00a15e2c25768fb0cee3a0a41d7fa86c 131 Gene3D G3DSA:3.30.40.60 1 107 1.6E-11 T 11-10-2018 IX88_14150 00a15e2c25768fb0cee3a0a41d7fa86c 131 SMART SM00507 6 75 2.8E-4 T 11-10-2018 IPR003615 HNH nuclease IX88_03295 e6268ba59fe970aaaef7f752b3fb4659 438 Pfam PF03573 outer membrane porin, OprD family 30 436 1.2E-108 T 11-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 IX88_03295 e6268ba59fe970aaaef7f752b3fb4659 438 Gene3D G3DSA:2.40.160.10 12 438 7.2E-157 T 11-10-2018 IPR023614 Porin domain superfamily IX88_01320 21f5f6705f6ec66d138836212c8c8bbd 180 Pfam PF00857 Isochorismatase family 4 175 1.5E-36 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 IX88_01320 21f5f6705f6ec66d138836212c8c8bbd 180 Gene3D G3DSA:3.40.50.850 1 180 1.4E-48 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 IX88_01320 21f5f6705f6ec66d138836212c8c8bbd 180 SUPERFAMILY SSF52499 2 178 2.22E-47 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 IX88_12125 6c45e775df05b6bc323c9bdf2e5817de 174 Gene3D G3DSA:3.90.190.10 3 155 1.2E-30 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like IX88_12125 6c45e775df05b6bc323c9bdf2e5817de 174 SUPERFAMILY SSF52799 9 133 3.74E-15 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like IX88_10185 5324e3ee022f895a72a6feda81fe0a26 507 Pfam PF03929 PepSY-associated TM region 10 364 2.2E-56 T 11-10-2018 IPR005625 PepSY-associated TM protein IX88_14100 6a1ab064f88cb15686cedc708563e212 92 Pfam PF06147 Protein of unknown function (DUF968) 5 55 2.4E-6 T 11-10-2018 IPR010373 Protein of unknown function DUF968 IX88_15005 7e239a390c276d880280979ff77c8729 76 ProDom PD057771 CRO REGULATORY TRANSCRIPTION CP-933R REPRESSOR DNA-BINDING REGULATION BACTERIOPHAGE PROTEIN REGULATOR 13 72 3.0E-7 T 11-10-2018 IPR020114 Cro repressor, HK022-type IX88_15885 8612c1ccd661061b7333b00a6f0450c2 242 SUPERFAMILY SSF56925 47 201 2.88E-7 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IX88_15885 8612c1ccd661061b7333b00a6f0450c2 242 Gene3D G3DSA:2.40.160.170 22 242 5.4E-88 T 11-10-2018 IX88_15820 38b15b3a18e5e4e797498fad4b4f0f50 150 SUPERFAMILY SSF54637 3 134 3.34E-39 T 11-10-2018 IPR029069 HotDog domain superfamily IX88_15820 38b15b3a18e5e4e797498fad4b4f0f50 150 Pfam PF13279 Thioesterase-like superfamily 11 130 9.2E-11 T 11-10-2018 IX88_15820 38b15b3a18e5e4e797498fad4b4f0f50 150 Gene3D G3DSA:3.10.129.10 2 138 4.7E-33 T 11-10-2018 IX88_05890 da4489a34f1beca7b8de0d4de546bad1 166 SUPERFAMILY SSF58113 5 160 9.94E-8 T 11-10-2018 IX88_05890 da4489a34f1beca7b8de0d4de546bad1 166 Gene3D G3DSA:1.20.120.20 2 160 3.3E-9 T 11-10-2018 IX88_02660 70bd66b3418d4d600659d8e75bc7f54a 553 Pfam PF02652 L-lactate permease 17 543 3.3E-216 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 IX88_02660 70bd66b3418d4d600659d8e75bc7f54a 553 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 7 546 2.1E-226 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 IX88_05665 5274b9e60115f176936a7440773a2d15 347 Pfam PF08808 RES domain 166 323 3.9E-16 T 11-10-2018 IPR014914 RES domain IX88_02890 bfa5bdcc2d69fc8ab68dfec4d4670cb7 423 SUPERFAMILY SSF56935 37 423 2.53E-12 T 11-10-2018 IX88_07060 d069ee415086bb2dc52d766221e11734 159 Gene3D G3DSA:2.40.128.640 49 159 3.9E-40 T 11-10-2018 IX88_07060 d069ee415086bb2dc52d766221e11734 159 Pfam PF04170 NlpE N-terminal domain 62 147 3.2E-28 T 11-10-2018 IPR007298 Copper resistance lipoprotein NlpE IX88_05630 3e9a2a28dc27958c00eacf8640ada7f3 328 PIRSF PIRSF034367 1 327 6.1E-200 T 11-10-2018 IPR015004 Protein of unknown function DUF1852 IX88_05630 3e9a2a28dc27958c00eacf8640ada7f3 328 Pfam PF08908 Domain of unknown function (DUF1852) 1 323 1.1E-188 T 11-10-2018 IPR015004 Protein of unknown function DUF1852 IX88_06850 20292bf7021cc955e7bcf8fd87741d76 433 SUPERFAMILY SSF103473 7 427 3.66E-82 T 11-10-2018 IPR036259 MFS transporter superfamily IX88_06850 20292bf7021cc955e7bcf8fd87741d76 433 Gene3D G3DSA:1.20.1250.20 5 430 7.2E-82 T 11-10-2018 IX88_06850 20292bf7021cc955e7bcf8fd87741d76 433 Pfam PF07690 Major Facilitator Superfamily 29 388 9.8E-43 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 IX88_15665 167d5da8424df18897a54c45e0738970 233 Pfam PF01988 VIT family 18 225 3.1E-54 T 11-10-2018 IPR008217 Ccc1 family IX88_09215 0318fe6cc58a17b83069d855c063ab59 53 TIGRFAM TIGR03510 XapX: XapX domain 4 49 6.5E-20 T 11-10-2018 IPR020017 XapX domain IX88_09215 0318fe6cc58a17b83069d855c063ab59 53 Pfam PF07235 Protein of unknown function (DUF1427) 2 51 1.4E-23 T 11-10-2018 IPR009872 Protein of unknown function DUF1427 IX88_17225 93611d02c08b8b8ee955df0f70e35b64 46 Pfam PF08085 Entericidin EcnA/B family 19 39 6.0E-10 T 11-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 IX88_02155 32ddf677c7e037638456eb84db9adb47 334 Gene3D G3DSA:3.40.190.170 47 243 6.0E-11 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily IX88_04265 1fb6915a6d57fad56abb0a1d4358e5c7 153 Pfam PF04657 Putative inner membrane exporter, YdcZ 12 149 3.5E-44 T 11-10-2018 IPR006750 Putative inner membrane exporter, YdcZ IX88_16560 980cc22fc14bf759cf8aa48bb068d8c2 121 SUPERFAMILY SSF48024 26 89 2.88E-5 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 IX88_03880 fce5b3beb96412926609fd7cf102dc0f 68 Pfam PF07869 Protein of unknown function (DUF1656) 3 56 8.4E-12 T 11-10-2018 IPR012451 Protein of unknown function DUF1656 IX88_09360 42028344e1caf5308c3209d149bace63 173 Pfam PF06127 Protein of unknown function (DUF962) 1 147 1.5E-25 T 11-10-2018 IPR009305 Protein of unknown function DUF962 IX88_15545 63288209cfa36afd4b91171708eba5a2 127 Pfam PF11342 Protein of unknown function (DUF3144) 20 105 5.4E-31 T 11-10-2018 IPR021490 Protein of unknown function DUF3144 IX88_01265 53f42213101e2b9cc2dda5506fcc36ea 293 Pfam PF16956 Putative general bacterial porin 2 291 8.5E-19 T 11-10-2018 IPR031593 Putative general bacterial porin IX88_12855 9d772300e73764a24c505eb4ed2462c0 147 Pfam PF06271 RDD family 7 140 4.3E-29 T 11-10-2018 IPR010432 RDD IX88_00540 c32f689b3e30baab9b89a33ed5a3d8e7 147 Pfam PF01814 Hemerythrin HHE cation binding domain 3 119 7.6E-13 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 IX88_02945 8fc06c145a2fb2b14a0446f8c880e179 145 Pfam PF07681 DoxX 23 100 4.2E-17 T 11-10-2018 IPR032808 DoxX family IX88_15300 e92ff120a1341c556b3e308e1d0d6e3e 698 Pfam PF02554 Carbon starvation protein CstA 38 414 1.3E-169 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 IX88_15300 e92ff120a1341c556b3e308e1d0d6e3e 698 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 469 597 4.0E-32 T 11-10-2018 IPR025299 CstA, C-terminal domain IX88_14955 f78f58fe6c4687847fabe30e70fcd4e0 135 Pfam PF06356 Protein of unknown function (DUF1064) 23 115 1.9E-20 T 11-10-2018 IPR009414 Protein of unknown function DUF1064 IX88_15045 a70a6cd94ccf6c4c17c778ae90bbaf2f 373 Pfam PF13479 AAA domain 18 202 9.5E-30 T 11-10-2018 IX88_05260 99b56aabbc054c386eba730292f4329e 189 Pfam PF02325 YGGT family 11 79 2.4E-5 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 IX88_05260 99b56aabbc054c386eba730292f4329e 189 Pfam PF02325 YGGT family 108 177 8.1E-16 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 IX88_08185 0e485caeeeda6ed1bf94fb6df1c4ee80 197 Pfam PF01810 LysE type translocator 12 189 1.4E-11 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 IX88_14865 e4569da0ebfa4c04d120c9cfe2102bc4 127 Pfam PF13262 Protein of unknown function (DUF4054) 16 105 6.7E-19 T 11-10-2018 IPR025127 Protein of unknown function DUF4054 IX88_16660 243413875fa353d453464d95472afa05 299 Pfam PF04228 Putative neutral zinc metallopeptidase 1 295 1.9E-112 T 11-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative IX88_17320 24cb377f2627fca4c4240f76398bbd69 307 Pfam PF03547 Membrane transport protein 2 145 3.7E-14 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 IX88_17320 24cb377f2627fca4c4240f76398bbd69 307 Pfam PF03547 Membrane transport protein 152 297 5.3E-11 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 IX88_10445 c19df326f23f1ad8c3941e6e78e7815d 379 Gene3D G3DSA:3.30.450.40 33 192 6.9E-28 T 11-10-2018 IPR029016 GAF-like domain superfamily IX88_14185 cf3efcd926c68ea716f1f9e37368f27c 297 Pfam PF00392 Bacterial regulatory proteins, gntR family 84 113 5.2E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 IX88_03145 f46ea9d3eadfbf9358d07ab3c75edbe6 404 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 122 351 1.1E-32 T 11-10-2018 IPR018713 Domain of unknown function DUF2236 IX88_02720 f64c5ec90854393fb62d8f334903d05c 191 Pfam PF13548 Domain of unknown function (DUF4126) 7 179 1.3E-48 T 11-10-2018 IPR025196 Domain of unknown function DUF4126 IX88_01405 d27708cd7928f1d28e1e5487689d3a9f 191 Pfam PF01169 Uncharacterized protein family UPF0016 107 181 3.1E-23 T 11-10-2018 IPR001727 Gdt1 family IX88_01405 d27708cd7928f1d28e1e5487689d3a9f 191 Pfam PF01169 Uncharacterized protein family UPF0016 6 80 4.2E-19 T 11-10-2018 IPR001727 Gdt1 family IX88_03680 f49487169a0014168d33546f96f09186 118 Pfam PF13441 YMGG-like Gly-zipper 74 115 4.0E-7 T 11-10-2018 IPR027367 YMGG-like Gly-zipper IX88_00470 c2063b23167a6afd997eb26d36d9e7c0 155 Pfam PF10107 Endonuclease related to archaeal Holliday junction resolvase 35 150 5.5E-26 T 11-10-2018 IPR019287 Holliday junction resolvase-related domain IX88_14810 47a18e799576f83a2a6bbf1923c37261 1020 Pfam PF08757 CotH kinase protein 582 930 1.1E-16 T 11-10-2018 IPR014867 Spore coat protein CotH IX88_08930 31a5cfc081663fed9c7a92b50093eb99 538 Gene3D G3DSA:1.10.4160.10 17 479 9.6E-16 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily IX88_05395 a8c84e64de8f0090084f667150d77a54 158 Gene3D G3DSA:3.90.70.10 51 157 7.0E-12 T 11-10-2018 IX88_03325 22b446501b8514c8244b5309de6a5794 75 Pfam PF04380 Membrane fusogenic activity 5 69 6.9E-13 T 11-10-2018 IPR007475 Membrane fusogenic activity IX88_02775 7ff8e41e60680e1576edcec86c9d60a4 381 Pfam PF07786 Protein of unknown function (DUF1624) 9 221 1.0E-19 T 11-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 IX88_10090 7dacdad146d1687aaf2ee63ee2ee032f 151 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 23 137 2.8E-31 T 11-10-2018 IPR008769 Poly granule associated IX88_00450 38ca86cc7c642e4d96945d0df44ad0fd 425 SUPERFAMILY SSF53474 54 181 8.5E-6 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold IX88_14065 c263488205e201829e77a13eb278b53a 689 Pfam PF16510 Phage P22-like portal protein 17 673 6.4E-146 T 11-10-2018 IPR032427 Phage P22-like portal protein IX88_14065 c263488205e201829e77a13eb278b53a 689 Gene3D G3DSA:1.20.58.1170 536 606 4.7E-13 T 11-10-2018 IX88_08435 06e586729e6258cd8b6d90adfabf1de0 232 Pfam PF08856 Protein of unknown function (DUF1826) 26 152 1.6E-5 T 11-10-2018 IPR014955 Protein of unknown function DUF1826 IX88_13705 d3904aa860947a6d79f84f572b5a19dc 182 Pfam PF05229 Spore Coat Protein U domain 27 179 1.2E-10 T 11-10-2018 IPR007893 Spore coat protein U IX88_17585 04a8c08fde82f009cf95dd434e161283 480 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 4 446 5.3E-118 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 IX88_06065 cf43e9a820c266f3cf6b37e9d858684c 186 Pfam PF02620 Uncharacterized ACR, COG1399 64 181 3.5E-18 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD IX88_10165 f5e6d651ce96011e2bc9540534b7ca1d 256 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 221 243 5.5E-6 T 11-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 IX88_09590 6cf27590718f0d0d599bc95d57b72bf0 186 Pfam PF04186 FxsA cytoplasmic membrane protein 6 113 1.3E-22 T 11-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 IX88_13215 e777987c98e57e36b826b0497a68a41d 182 Pfam PF10973 Protein of unknown function (DUF2799) 28 110 1.3E-18 T 11-10-2018 IPR021242 Protein of unknown function DUF2799 IX88_03130 c5dd016e2f2cf05f9432eb1b9fafcdaa 142 Pfam PF11162 Protein of unknown function (DUF2946) 13 139 7.3E-8 T 11-10-2018 IPR021333 Protein of unknown function DUF2946 IX88_10605 03edfc762817409d4f7906285a97bf2a 469 Pfam PF02667 Short chain fatty acid transporter 9 455 6.4E-87 T 11-10-2018 IPR006160 Short chain fatty acid transporter AtoE IX88_16150 fd3b237f00df069c3e62880dd47ea752 548 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 62 221 1.1E-20 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like