locus-tag	class	description
AT570_00030	COG3111	PFAM Bacterial OB fold (BOF) protein
AT570_00100	COG2815	serine threonine protein kinase
AT570_00100	COG0515	serine threonine protein kinase
AT570_00125	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AT570_00130	COG1610	YqeY-like protein
AT570_00135	COG4783	chaperone-mediated protein folding
AT570_00160	COG1286	toxin biosynthetic process
AT570_00190	COG0778	Nitroreductase
AT570_00200	COG0513	Belongs to the DEAD box helicase family
AT570_00220	COG2363	Small membrane protein
AT570_00250	COG4650	regulator
AT570_00255	COG1234	tRNA 3'-trailer cleavage
AT570_00260	COG1690	Belongs to the RtcB family
AT570_00280	COG2195	Cleaves the N-terminal amino acid of tripeptides
AT570_00290	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AT570_00300	COG2819	hydrolase of the alpha beta superfamily
AT570_00305	COG1960	acyl-CoA dehydrogenase activity
AT570_00310	COG1301	dicarboxylic acid transport
AT570_00320	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AT570_00325	COG3139	Protein of unknown function (DUF1315)
AT570_00330	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AT570_00335	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AT570_00345	COG0494	nUDIX hydrolase
AT570_00355	COG0642	Histidine kinase
AT570_00360	COG0745	RESPONSE REGULATOR receiver
AT570_00380	COG1720	tRNA m6t6A37 methyltransferase activity
AT570_00395	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AT570_00405	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AT570_00415	COG4598	ABC transporter
AT570_00420	COG4160	amino acid transport
AT570_00425	COG4215	(ABC) transporter
AT570_00440	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT570_00450	COG1538	Outer membrane efflux protein
AT570_00480	COG1131	(ABC) transporter
AT570_00485	COG0842	Transport permease protein
AT570_00500	COG0772	Belongs to the SEDS family
AT570_00505	COG2951	lytic endotransglycosylase activity
AT570_00530	COG2207	Transcriptional regulator
AT570_00545	COG0052	Belongs to the universal ribosomal protein uS2 family
AT570_00550	COG0024	Methionine aminopeptidase
AT570_00560	COG2223	nitrite transmembrane transporter activity
AT570_00570	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AT570_00575	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AT570_00580	COG1960	acyl-CoA dehydrogenase activity
AT570_00595	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AT570_00600	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
AT570_00605	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AT570_00625	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AT570_00630	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AT570_00635	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AT570_00670	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
AT570_00685	COG3104	oligopeptide transport
AT570_00695	COG0512	Glutamine amidotransferase of anthranilate synthase
AT570_00700	COG0308	aminopeptidase N
AT570_00730	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AT570_00760	COG3739	integral membrane protein
AT570_00785	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
AT570_00795	COG1132	(ABC) transporter
AT570_00805	COG3433	isochorismatase activity
AT570_00805	COG1535	isochorismatase
AT570_00810	COG1021	2,3-dihydroxybenzoate-AMP ligase
AT570_00815	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AT570_00825	COG4774	siderophore transport
AT570_00830	COG4607	ABC-type enterochelin transport system periplasmic component
AT570_00835	COG4604	ABC transporter, ATP-binding protein
AT570_00840	COG4605	iron ion homeostasis
AT570_00845	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AT570_00850	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AT570_00865	COG2964	Protein conserved in bacteria
AT570_00875	COG1741	Belongs to the pirin family
AT570_00915	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AT570_00925	COG0596	Alpha beta hydrolase
AT570_00940	COG0583	DNA-binding transcription factor activity
AT570_00945	COG1335	isochorismatase
AT570_00985	COG2879	small protein
AT570_00990	COG1966	Carbon starvation protein
AT570_01010	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AT570_01035	COG1067	ATP-dependent peptidase activity
AT570_01040	COG0583	DNA-binding transcription factor activity
AT570_01065	COG1686	Belongs to the peptidase S11 family
AT570_01070	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AT570_01105	COG0616	signal peptide processing
AT570_01110	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AT570_01120	COG0573	inorganic phosphate transmembrane transporter activity
AT570_01125	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AT570_01130	COG1113	amino acid transport
AT570_01135	COG3961	Belongs to the TPP enzyme family
AT570_01140	COG1522	sequence-specific DNA binding
AT570_01150	COG0076	glutamate decarboxylase activity
AT570_01155	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AT570_01170	COG2249	NAD(P)H dehydrogenase (quinone) activity
AT570_01180	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AT570_01215	COG0352	thiamine-phosphate diphosphorylase activity
AT570_01240	COG0612	Peptidase, M16
AT570_01255	COG0583	DNA-binding transcription factor activity
AT570_01260	COG0477	Major facilitator Superfamily
AT570_01280	COG1187	pseudouridine synthase activity
AT570_01295	COG1686	Belongs to the peptidase S11 family
AT570_01300	COG1252	NADH dehydrogenase
AT570_01310	COG0415	Belongs to the DNA photolyase family
AT570_01325	COG1215	transferase activity, transferring glycosyl groups
AT570_01355	COG2070	2-Nitropropane dioxygenase
AT570_01410	COG0556	nucleotide-excision repair
AT570_01440	COG0443	Heat shock 70 kDa protein
AT570_01465	COG4221	oxidoreductase activity
AT570_01475	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AT570_01480	COG1381	Involved in DNA repair and RecF pathway recombination
AT570_01490	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AT570_01505	COG0681	Belongs to the peptidase S26 family
AT570_01515	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AT570_01525	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AT570_01545	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AT570_01550	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AT570_01555	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AT570_01565	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AT570_01570	COG4208	sulfate ABC transporter
AT570_01575	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AT570_01580	COG0583	DNA-binding transcription factor activity
AT570_01585	COG4625	pathogenesis
AT570_01600	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AT570_01615	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AT570_01625	COG1056	cytidyltransferase-related domain
AT570_01625	COG1051	belongs to the nudix hydrolase family
AT570_01630	COG1024	Enoyl-CoA hydratase
AT570_01635	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AT570_01710	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT570_01720	COG0534	Mate efflux family protein
AT570_01735	COG4774	siderophore transport
AT570_01740	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
AT570_01765	COG0019	diaminopimelate decarboxylase activity
AT570_01770	COG3486	L-lysine 6-monooxygenase (NADPH) activity
AT570_01775	COG1021	2,3-dihydroxybenzoate-AMP ligase
AT570_01780	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AT570_01785	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AT570_01785	COG2226	methyltransferase
AT570_01785	COG3433	isochorismatase activity
AT570_01790	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AT570_01795	COG1028	Short-chain dehydrogenase reductase Sdr
AT570_01800	COG1535	isochorismatase
AT570_01800	COG3433	isochorismatase activity
AT570_01805	COG1169	isochorismate synthase
AT570_01835	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AT570_01835	COG0047	phosphoribosylformylglycinamidine synthase activity
AT570_01855	COG1473	amidohydrolase
AT570_01860	COG0824	Thioesterase
AT570_01880	COG0823	Involved in the tonB-independent uptake of proteins
AT570_01900	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AT570_01935	COG0628	permease
AT570_01945	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AT570_01950	COG0596	Alpha beta hydrolase
AT570_01955	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AT570_01955	COG0616	signal peptide processing
AT570_01965	COG2333	competence protein COMEC
AT570_01965	COG0658	competence protein
AT570_01970	COG1136	(ABC) transporter
AT570_01975	COG4591	ABC-type transport system involved in lipoprotein release permease component
AT570_02005	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT570_02025	COG0463	Glycosyl transferase, family 2
AT570_02055	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
AT570_02060	COG1280	lysine exporter protein (LysE YggA)
AT570_02070	COG0019	diaminopimelate decarboxylase activity
AT570_02080	COG1113	amino acid transport
AT570_02095	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
AT570_02105	COG3339	Conserved Protein
AT570_02110	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AT570_02115	COG0243	molybdopterin cofactor binding
AT570_02120	COG1929	Belongs to the glycerate kinase type-1 family
AT570_02135	COG0778	Nitroreductase
AT570_02195	COG3811	Belongs to the UPF0386 family
AT570_02205	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AT570_02220	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AT570_02245	COG0741	lytic transglycosylase activity
AT570_02265	COG0584	glycerophosphoryl diester phosphodiesterase
AT570_02270	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AT570_02290	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AT570_02310	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AT570_02315	COG0477	Major facilitator Superfamily
AT570_02365	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AT570_02370	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AT570_02400	COG0505	Belongs to the CarA family
AT570_02415	COG1309	transcriptional regulator
AT570_02420	COG0251	oxidation-reduction process
AT570_02430	COG0589	response to stress
AT570_02445	COG2843	Capsule synthesis protein
AT570_02465	COG2321	neutral zinc metallopeptidase
AT570_02470	COG2354	Protein conserved in bacteria
AT570_02490	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AT570_02510	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AT570_02515	COG1053	succinate dehydrogenase
AT570_02520	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
AT570_02525	COG2009	succinate dehydrogenase
AT570_02565	COG2921	Belongs to the UPF0250 family
AT570_02570	COG0321	lipoyl(octanoyl) transferase activity
AT570_02585	COG0531	amino acid
AT570_02595	COG1733	regulation of RNA biosynthetic process
AT570_02600	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AT570_02605	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AT570_02605	COG1648	precorrin-2 dehydrogenase activity
AT570_02620	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AT570_02650	COG0671	phosphoesterase, PA-phosphatase related
AT570_02655	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT570_02665	COG1538	Outer membrane efflux protein
AT570_02670	COG0393	Putative heavy-metal-binding
AT570_02675	COG0393	Putative heavy-metal-binding
AT570_02685	COG1028	Short-chain dehydrogenase reductase Sdr
AT570_02695	COG0525	valine-tRNA ligase activity
AT570_02715	COG0583	DNA-binding transcription factor activity
AT570_02725	COG0004	ammonium transporteR
AT570_02735	COG0642	Histidine kinase
AT570_02740	COG0745	RESPONSE REGULATOR receiver
AT570_02745	COG2194	sulfuric ester hydrolase activity
AT570_02765	COG1752	Esterase of the alpha-beta hydrolase superfamily
AT570_02780	COG2315	Protein conserved in bacteria
AT570_02785	COG0142	geranyltranstransferase activity
AT570_02790	COG2828	Protein conserved in bacteria
AT570_02795	COG1113	amino acid transport
AT570_02815	COG2207	Transcriptional regulator
AT570_02840	COG2249	NAD(P)H dehydrogenase (quinone) activity
AT570_02860	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AT570_02865	COG1530	ribonuclease E activity
AT570_02870	COG0424	maF-like protein
AT570_02875	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AT570_02880	COG1792	Involved in formation and maintenance of cell shape
AT570_02885	COG1077	Cell shape determining protein MreB Mrl
AT570_02890	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AT570_02900	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AT570_02925	COG3590	peptidase
AT570_02930	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
AT570_02935	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AT570_02940	COG1752	Esterase of the alpha-beta hydrolase superfamily
AT570_02945	COG1115	amino acid carrier protein
AT570_02960	COG2814	Major facilitator Superfamily
AT570_02965	COG1289	transmembrane transporter activity
AT570_03015	COG1376	ErfK ybiS ycfS ynhG family protein
AT570_03020	COG2832	Protein of unknown function (DUF454)
AT570_03030	COG5510	response to toxic substance
AT570_03050	COG0840	transmembrane signaling receptor activity
AT570_03090	COG3422	double-strand break repair
AT570_03095	COG2824	Alkylphosphonate utilization operon protein PhnA
AT570_03100	COG3189	MarR family transcriptional regulator
AT570_03110	COG0354	folic acid binding
AT570_03115	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AT570_03125	COG0679	Auxin Efflux Carrier
AT570_03130	COG1902	pentaerythritol trinitrate reductase activity
AT570_03135	COG4772	TonB-dependent receptor
AT570_03140	COG2094	Belongs to the DNA glycosylase MPG family
AT570_03170	COG2233	PERMEase
AT570_03180	COG0833	amino acid
AT570_03185	COG1690	Belongs to the RtcB family
AT570_03205	COG0183	Belongs to the thiolase family
AT570_03225	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AT570_03245	COG2207	Transcriptional regulator
AT570_03250	COG0183	Belongs to the thiolase family
AT570_03270	COG2153	protein acetylation
AT570_03280	COG1272	protein, Hemolysin III
AT570_03285	COG0477	Major facilitator Superfamily
AT570_03300	COG0450	alkyl hydroperoxide reductase
AT570_03320	COG0285	dihydrofolate synthase activity
AT570_03355	COG0133	tryptophan synthase activity
AT570_03365	COG4206	TonB-dependent receptor
AT570_03370	COG2096	Adenosyltransferase
AT570_03390	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
AT570_03395	COG0745	RESPONSE REGULATOR receiver
AT570_03400	COG2205	protein histidine kinase activity
AT570_03410	COG1960	acyl-CoA dehydrogenase activity
AT570_03415	COG1960	acyl-CoA dehydrogenase activity
AT570_03465	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AT570_03480	COG0438	transferase activity, transferring glycosyl groups
AT570_03485	COG0463	Glycosyl transferase, family 2
AT570_03490	COG0726	polysaccharide deacetylase
AT570_03510	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
AT570_03515	COG2205	protein histidine kinase activity
AT570_03535	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AT570_03560	COG0582	viral genome integration into host DNA
AT570_03590	COG1862	Preprotein translocase
AT570_03600	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AT570_03605	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AT570_03615	COG3781	membrane
AT570_03620	COG0613	PHP domain protein
AT570_03630	COG2350	Protein conserved in bacteria
AT570_03655	COG0582	viral genome integration into host DNA
AT570_03705	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AT570_03730	COG2132	Multicopper oxidase
AT570_03745	COG2205	protein histidine kinase activity
AT570_03820	COG3013	Belongs to the UPF0304 family
AT570_03855	COG1607	acyl-coa hydrolase
AT570_03870	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AT570_03870	COG3453	Protein conserved in bacteria
AT570_03915	COG2199	diguanylate cyclase activity
AT570_03925	COG1408	metallophosphoesterase
AT570_03930	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AT570_03940	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AT570_03960	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AT570_03965	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AT570_03970	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AT570_03980	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AT570_03990	COG2969	positive regulation of protein catabolic process
AT570_04010	COG1960	acyl-CoA dehydrogenase activity
AT570_04015	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AT570_04030	COG1309	transcriptional regulator
AT570_04035	COG1960	acyl-CoA dehydrogenase activity
AT570_04080	COG1183	phosphatidylcholine synthase activity
AT570_04085	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AT570_04115	COG0741	lytic transglycosylase activity
AT570_04115	COG0739	heme binding
AT570_04115	COG1196	nuclear chromosome segregation
AT570_04125	COG1702	phosphate starvation-inducible protein PhoH
AT570_04160	COG1295	ribonuclease BN
AT570_04165	COG0697	spore germination
AT570_04170	COG2169	Transcriptional regulator
AT570_04175	COG0179	Fumarylacetoacetate (FAA) hydrolase
AT570_04220	COG0557	exoribonuclease II activity
AT570_04225	COG0339	signal peptide processing
AT570_04230	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
AT570_04260	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
AT570_04265	COG1960	acyl-CoA dehydrogenase activity
AT570_04290	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AT570_04300	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AT570_04420	COG0626	cystathionine gamma-synthase activity
AT570_04425	COG0433	COG0433 Predicted ATPase
AT570_04430	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AT570_04430	COG1017	nitric oxide dioxygenase activity
AT570_04435	COG1959	2 iron, 2 sulfur cluster binding
AT570_04450	COG1301	dicarboxylic acid transport
AT570_04455	COG1946	Acyl-CoA thioesterase
AT570_04475	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AT570_04480	COG1040	competence protein
AT570_04485	COG0494	nUDIX hydrolase
AT570_04495	COG0598	Magnesium transport protein CorA
AT570_04505	COG2854	intermembrane phospholipid transfer
AT570_04515	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AT570_04520	COG1127	ABC transporter
AT570_04525	COG0513	Belongs to the DEAD box helicase family
AT570_04545	COG0408	coproporphyrinogen oxidase activity
AT570_04560	COG1960	acyl-CoA dehydrogenase activity
AT570_04570	COG1983	PspC domain protein
AT570_04575	COG0517	IMP dehydrogenase activity
AT570_04625	COG0583	DNA-binding transcription factor activity
AT570_04665	COG1012	belongs to the aldehyde dehydrogenase family
AT570_04675	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AT570_04680	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AT570_04685	COG0833	amino acid
AT570_04715	COG1192	Involved in chromosome partitioning
AT570_04720	COG0628	permease
AT570_04730	COG1289	transmembrane transporter activity
AT570_04745	COG2249	NAD(P)H dehydrogenase (quinone) activity
AT570_04750	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AT570_04760	COG0277	FAD linked oxidase domain protein
AT570_04765	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AT570_04790	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AT570_04795	COG5380	lipid catabolic process
AT570_04815	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AT570_04865	COG0194	GDP metabolic process
AT570_04875	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AT570_04895	COG3307	-O-antigen
AT570_04910	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
AT570_04915	COG1704	LemA family
AT570_04925	COG0493	'glutamate synthase
AT570_04930	COG0067	glutamate synthase
AT570_04930	COG0070	glutamate synthase
AT570_04930	COG0069	glutamate synthase activity
AT570_04980	COG2226	methyltransferase
AT570_04995	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AT570_05000	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AT570_05045	COG0833	amino acid
AT570_05110	COG0488	(ABC) transporter
AT570_05135	COG4221	oxidoreductase activity
AT570_05140	COG0659	secondary active sulfate transmembrane transporter activity
AT570_05150	COG0745	RESPONSE REGULATOR receiver
AT570_05160	COG0427	acetyl-CoA hydrolase
AT570_05190	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AT570_05220	COG2329	Antibiotic biosynthesis monooxygenase
AT570_05235	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AT570_05290	COG2207	Transcriptional regulator
AT570_05295	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
AT570_05315	COG2249	NAD(P)H dehydrogenase (quinone) activity
AT570_05320	COG1733	regulation of RNA biosynthetic process
AT570_05350	COG1733	regulation of RNA biosynthetic process
AT570_05400	COG0583	DNA-binding transcription factor activity
AT570_05405	COG2814	Major facilitator Superfamily
AT570_05440	COG1335	isochorismatase
AT570_05450	COG1012	belongs to the aldehyde dehydrogenase family
AT570_05455	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AT570_05465	COG1113	amino acid transport
AT570_05475	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
AT570_05490	COG2814	Major facilitator Superfamily
AT570_05500	COG0351	phosphomethylpyrimidine kinase
AT570_05500	COG0352	thiamine-phosphate diphosphorylase activity
AT570_05500	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AT570_05520	COG1309	transcriptional regulator
AT570_05525	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AT570_05530	COG3706	GGDEF domain
AT570_05540	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AT570_05550	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AT570_05555	COG3162	membrane
AT570_05560	COG0784	Response regulator, receiver
AT570_05560	COG2198	Histidine kinase
AT570_05560	COG2205	protein histidine kinase activity
AT570_05585	COG1522	sequence-specific DNA binding
AT570_05590	COG1335	isochorismatase
AT570_05595	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AT570_05605	COG0668	transmembrane transport
AT570_05615	COG1519	Transferase
AT570_05620	COG1902	pentaerythritol trinitrate reductase activity
AT570_05640	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AT570_05665	COG0426	domain, Protein
AT570_05665	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AT570_05670	COG4774	siderophore transport
AT570_05675	COG2119	membrane
AT570_05685	COG0508	dehydrogenase complex catalyzes the overall conversion of
AT570_05695	COG4942	peptidase
AT570_05710	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AT570_05720	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AT570_05740	COG0189	ligase activity
AT570_05765	COG0708	Exodeoxyribonuclease III
AT570_05770	COG1393	Belongs to the ArsC family
AT570_05785	COG3706	GGDEF domain
AT570_05820	COG2351	hydroxyisourate hydrolase activity
AT570_05825	COG2233	PERMEase
AT570_05835	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AT570_05845	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
AT570_05855	COG3150	esterase
AT570_05890	COG1388	LysM domain
AT570_05890	COG1705	Flagellar rod assembly protein muramidase FlgJ
AT570_05950	COG4691	Plasmid stability protein
AT570_05985	COG0798	PFAM Bile acid sodium symporter
AT570_06025	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AT570_06080	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
AT570_06110	COG0659	secondary active sulfate transmembrane transporter activity
AT570_06115	COG0589	response to stress
AT570_06165	COG0606	chelatase, subunit chli
AT570_06170	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AT570_06180	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AT570_06195	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AT570_06210	COG0318	PFAM AMP-dependent synthetase and ligase
AT570_06220	COG0477	Major facilitator Superfamily
AT570_06225	COG2860	membrane
AT570_06230	COG3012	SEC-C Motif Domain Protein
AT570_06235	COG1253	flavin adenine dinucleotide binding
AT570_06245	COG2814	Major facilitator Superfamily
AT570_06255	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AT570_06290	COG0655	NAD(P)H dehydrogenase (quinone) activity
AT570_06300	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AT570_06335	COG1309	transcriptional regulator
AT570_06370	COG0758	DNA mediated transformation
AT570_06380	COG0697	spore germination
AT570_06385	COG1309	transcriptional regulator
AT570_06400	COG0386	Belongs to the glutathione peroxidase family
AT570_06470	COG1121	(ABC) transporter
AT570_06475	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AT570_06480	COG1280	lysine exporter protein (LysE YggA)
AT570_06485	COG2837	iron assimilation
AT570_06490	COG0281	malic enzyme
AT570_06535	COG0519	Catalyzes the synthesis of GMP from XMP
AT570_06535	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AT570_06540	COG4399	Belongs to the UPF0754 family
AT570_06545	COG2259	Doxx family
AT570_06550	COG0586	Pfam SNARE associated Golgi protein
AT570_06565	COG1192	Involved in chromosome partitioning
AT570_06575	COG0271	Belongs to the BolA IbaG family
AT570_06615	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AT570_06615	COG3321	synthase
AT570_06615	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AT570_06615	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
AT570_06620	COG1960	acyl-CoA dehydrogenase activity
AT570_06625	COG0318	PFAM AMP-dependent synthetase and ligase
AT570_06630	COG2197	response regulator
AT570_06640	COG3916	Acyl-homoserine-lactone synthase
AT570_06645	COG0477	Major facilitator Superfamily
AT570_06650	COG1024	Enoyl-CoA hydratase
AT570_06655	COG1024	Enoyl-CoA hydratase
AT570_06660	COG1960	acyl-CoA dehydrogenase activity
AT570_06665	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AT570_06685	COG1113	amino acid transport
AT570_06690	COG1113	amino acid transport
AT570_06695	COG0251	oxidation-reduction process
AT570_06710	COG1522	sequence-specific DNA binding
AT570_06735	COG0564	pseudouridine synthase activity
AT570_06820	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AT570_06835	COG1802	Transcriptional regulator
AT570_06840	COG1448	Aminotransferase
AT570_06845	COG0277	FAD linked oxidase domain protein
AT570_06855	COG2186	Transcriptional regulator
AT570_06865	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AT570_06870	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AT570_06885	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AT570_06890	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AT570_06915	COG0438	transferase activity, transferring glycosyl groups
AT570_06945	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
AT570_06975	COG0728	peptidoglycan biosynthetic process
AT570_06980	COG3023	N-Acetylmuramoyl-L-alanine amidase
AT570_07030	COG0546	phosphoglycolate phosphatase activity
AT570_07035	COG1028	Short-chain dehydrogenase reductase Sdr
AT570_07055	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AT570_07060	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AT570_07065	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AT570_07070	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AT570_07075	COG1116	anion transmembrane transporter activity
AT570_07080	COG1309	transcriptional regulator
AT570_07085	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AT570_07095	COG0196	riboflavin kinase activity
AT570_07100	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AT570_07110	COG1047	Peptidyl-prolyl cis-trans
AT570_07150	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AT570_07175	COG0583	DNA-binding transcription factor activity
AT570_07205	COG2951	lytic endotransglycosylase activity
AT570_07210	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AT570_07230	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AT570_07240	COG0671	phosphoesterase, PA-phosphatase related
AT570_07245	COG0861	Integral membrane protein TerC family
AT570_07255	COG0754	glutathionylspermidine amidase activity
AT570_07265	COG0402	S-adenosylhomocysteine deaminase activity
AT570_07280	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AT570_07285	COG1230	cation diffusion facilitator family transporter
AT570_07300	COG0706	membrane insertase activity
AT570_07315	COG0230	Belongs to the bacterial ribosomal protein bL34 family
AT570_07325	COG0592	DNA-directed DNA polymerase activity
AT570_07335	COG0187	DNA topoisomerase II activity
AT570_07345	COG0586	Pfam SNARE associated Golgi protein
AT570_07350	COG0488	(ABC) transporter
AT570_07375	COG0596	Alpha beta hydrolase
AT570_07380	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
AT570_07385	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AT570_07425	COG0733	neurotransmitter:sodium symporter activity
AT570_07465	COG2233	PERMEase
AT570_07480	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT570_07515	COG2814	Major facilitator Superfamily
AT570_07520	COG0656	L-ascorbic acid biosynthetic process
AT570_07525	COG0583	DNA-binding transcription factor activity
AT570_07535	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AT570_07540	COG1064	alcohol dehydrogenase
AT570_07545	COG2818	Glycosylase
AT570_07560	COG1194	a g-specific adenine glycosylase
AT570_07580	COG2983	Belongs to the UPF0260 family
AT570_07585	COG2133	pyrroloquinoline quinone binding
AT570_07590	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AT570_07595	COG2116	formate transmembrane transporter activity
AT570_07615	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AT570_07620	COG1335	isochorismatase
AT570_07625	COG0385	Bile acid
AT570_07630	COG0534	Mate efflux family protein
AT570_07635	COG1683	Conserved Protein
AT570_07655	COG0625	glutathione transferase activity
AT570_07665	COG1113	amino acid transport
AT570_07675	COG0523	cobalamin synthesis protein
AT570_07685	COG2188	Transcriptional regulator
AT570_07715	COG0010	Belongs to the arginase family
AT570_07735	COG1280	lysine exporter protein (LysE YggA)
AT570_07755	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AT570_07765	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AT570_07770	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AT570_07820	COG0753	catalase activity
AT570_07870	COG0534	Mate efflux family protein
AT570_07875	COG0436	Aminotransferase
AT570_07880	COG2733	membrane
AT570_07895	COG2918	glutathione biosynthetic process
AT570_07935	COG0640	Transcriptional regulator
AT570_07965	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AT570_08045	COG1525	nuclease
AT570_08180	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AT570_08230	COG1192	Involved in chromosome partitioning
AT570_08245	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AT570_08275	COG0739	heme binding
AT570_08455	COG0501	Belongs to the peptidase M48B family
AT570_08515	COG0589	response to stress
AT570_08520	COG0659	secondary active sulfate transmembrane transporter activity
AT570_08530	COG0606	chelatase, subunit chli
AT570_08540	COG0347	Belongs to the P(II) protein family
AT570_08545	COG0004	ammonium transporteR
AT570_08555	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AT570_08555	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AT570_08595	COG0795	lipopolysaccharide-transporting ATPase activity
AT570_08600	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AT570_08605	COG0793	Belongs to the peptidase S41A family
AT570_08620	COG2197	response regulator
AT570_08630	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AT570_08640	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AT570_08645	COG4974	Belongs to the 'phage' integrase family
AT570_08670	COG0772	Belongs to the SEDS family
AT570_08675	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AT570_08680	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AT570_08685	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AT570_08710	COG0697	spore germination
AT570_08715	COG1538	Outer membrane efflux protein
AT570_08735	COG3275	phosphorelay sensor kinase activity
AT570_08745	COG0181	hydroxymethylbilane synthase activity
AT570_08790	COG1716	ATPase activity
AT570_08795	COG0546	phosphoglycolate phosphatase activity
AT570_08890	COG0596	Alpha beta hydrolase
AT570_08895	COG2056	Na+-H+ antiporter family
AT570_08910	COG0326	Molecular chaperone. Has ATPase activity
AT570_08925	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AT570_08990	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AT570_08995	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AT570_08995	COG2169	Transcriptional regulator
AT570_09025	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AT570_09035	COG0497	DNA recombination
AT570_09050	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AT570_09060	COG0237	dephospho-CoA kinase activity
AT570_09105	COG0195	Participates in both transcription termination and antitermination
AT570_09125	COG2212	antiporter activity
AT570_09135	COG0651	ATP synthesis coupled electron transport
AT570_09140	COG1006	Multisubunit Na H antiporter MnhC subunit
AT570_09145	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AT570_09145	COG2111	Na H antiporter
AT570_09160	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AT570_09180	COG2226	methyltransferase
AT570_09200	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
AT570_09205	COG1074	ATP-dependent DNA helicase activity
AT570_09210	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AT570_09230	COG0598	Magnesium transport protein CorA
AT570_09235	COG0789	Transcriptional regulator
AT570_09240	COG0484	heat shock protein binding
AT570_09255	COG0475	glutathione-regulated potassium exporter activity
AT570_09255	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AT570_09260	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AT570_09280	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AT570_09290	COG4535	Mg2 and Co2 transporter CorC
AT570_09295	COG0425	Belongs to the sulfur carrier protein TusA family
AT570_09305	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
AT570_09305	COG0644	oxidoreductase
AT570_09315	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AT570_09330	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AT570_09335	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
AT570_09375	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AT570_09390	COG0534	Mate efflux family protein
AT570_09400	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AT570_09405	COG1028	Short-chain dehydrogenase reductase Sdr
AT570_09410	COG0583	DNA-binding transcription factor activity
AT570_09430	COG1530	ribonuclease E activity
AT570_09445	COG0546	phosphoglycolate phosphatase activity
AT570_09450	COG2378	regulation of single-species biofilm formation
AT570_09455	COG0625	glutathione transferase activity
AT570_09465	COG0583	DNA-binding transcription factor activity
AT570_09520	COG0473	3-isopropylmalate dehydrogenase activity
AT570_09575	COG1301	dicarboxylic acid transport
AT570_09585	COG1560	Kdo2-lipid A biosynthetic process
AT570_09590	COG1280	lysine exporter protein (LysE YggA)
AT570_09610	COG1733	regulation of RNA biosynthetic process
AT570_09635	COG0210	DNA helicase
AT570_09640	COG0724	RNA recognition motif
AT570_09660	COG4651	solute:proton antiporter activity
AT570_09660	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AT570_09665	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AT570_09670	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AT570_09685	COG0788	formyltetrahydrofolate deformylase activity
AT570_09785	COG2813	Specifically methylates the guanine in position
AT570_09785	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AT570_09795	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AT570_09805	COG4774	siderophore transport
AT570_09815	COG0740	serine-type endopeptidase activity
AT570_09835	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AT570_09835	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AT570_09840	COG0857	belongs to the CobB CobQ family
AT570_09840	COG0280	phosphate acetyltransferase
AT570_09845	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AT570_09855	COG0800	Aldolase
AT570_09865	COG3265	gluconokinase activity
AT570_09870	COG1012	belongs to the aldehyde dehydrogenase family
AT570_09880	COG2267	carboxylic ester hydrolase activity
AT570_09895	COG0793	Belongs to the peptidase S41A family
AT570_09930	COG1426	Protein conserved in bacteria
AT570_09970	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AT570_09975	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AT570_09985	COG0318	PFAM AMP-dependent synthetase and ligase
AT570_09990	COG1216	Glycosyl transferase, family 2
AT570_10000	COG2986	histidine ammonia-lyase
AT570_10040	COG1028	Short-chain dehydrogenase reductase Sdr
AT570_10045	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AT570_10065	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AT570_10075	COG1162	GTPase activity
AT570_10080	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
AT570_10095	COG1538	Outer membrane efflux protein
AT570_10100	COG1136	(ABC) transporter
AT570_10100	COG0577	efflux transmembrane transporter activity
AT570_10105	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT570_10135	COG0028	Belongs to the TPP enzyme family
AT570_10140	COG0440	acetolactate synthase activity
AT570_10175	COG3501	Rhs element vgr protein
AT570_10195	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AT570_10210	COG0084	hydrolase, TatD family'
AT570_10220	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AT570_10225	COG0583	DNA-binding transcription factor activity
AT570_10235	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AT570_10240	COG2814	Major facilitator Superfamily
AT570_10250	COG0697	spore germination
AT570_10255	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AT570_10260	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AT570_10265	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AT570_10280	COG3622	Belongs to the hyi family
AT570_10285	COG2084	Dehydrogenase
AT570_10290	COG1024	Enoyl-CoA hydratase
AT570_10295	COG5002	protein histidine kinase activity
AT570_10295	COG2205	protein histidine kinase activity
AT570_10295	COG0784	Response regulator, receiver
AT570_10315	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AT570_10325	COG3956	TIGRFAM MazG family protein
AT570_10330	COG1555	photosystem II stabilization
AT570_10335	COG0617	tRNA 3'-terminal CCA addition
AT570_10340	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AT570_10360	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AT570_10365	COG3028	Belongs to the UPF0307 family
AT570_10370	COG0318	PFAM AMP-dependent synthetase and ligase
AT570_10390	COG0625	glutathione transferase activity
AT570_10395	COG1238	metal cluster binding
AT570_10415	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AT570_10445	COG0072	phenylalanine-tRNA ligase activity
AT570_10470	COG0248	Ppx GppA phosphatase
AT570_10480	COG0037	tRNA processing
AT570_10520	COG1764	response to oxidative stress
AT570_10525	COG1846	Transcriptional regulator
AT570_10535	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AT570_10595	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AT570_10600	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AT570_10605	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AT570_10615	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AT570_10665	COG1214	PFAM Peptidase M22, glycoprotease
AT570_10690	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AT570_10695	COG0561	phosphatase activity
AT570_10705	COG2132	Multicopper oxidase
AT570_10725	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AT570_10730	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
AT570_10735	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AT570_10765	COG1063	alcohol dehydrogenase
AT570_10770	COG0583	DNA-binding transcription factor activity
AT570_10775	COG1960	acyl-CoA dehydrogenase activity
AT570_10780	COG2814	Major facilitator Superfamily
AT570_10785	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AT570_10795	COG1053	succinate dehydrogenase
AT570_10800	COG0583	DNA-binding transcription factor activity
AT570_10820	COG0583	DNA-binding transcription factor activity
AT570_10830	COG1473	amidohydrolase
AT570_10850	COG0583	DNA-binding transcription factor activity
AT570_10860	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AT570_10865	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AT570_10915	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AT570_10930	COG0745	RESPONSE REGULATOR receiver
AT570_10935	COG2205	protein histidine kinase activity
AT570_10970	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
AT570_11000	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AT570_11005	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AT570_11030	COG0583	DNA-binding transcription factor activity
AT570_11050	COG0668	transmembrane transport
AT570_11055	COG2081	HI0933 family
AT570_11060	COG2515	1-aminocyclopropane-1-carboxylate deaminase
AT570_11090	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AT570_11090	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AT570_11100	COG0489	protein tyrosine kinase activity
AT570_11155	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AT570_11165	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AT570_11180	COG0730	response to heat
AT570_11190	COG1196	nuclear chromosome segregation
AT570_11210	COG2223	nitrite transmembrane transporter activity
AT570_11215	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
AT570_11220	COG1877	trehalose-phosphatase activity
AT570_11225	COG0596	Alpha beta hydrolase
AT570_11225	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AT570_11225	COG2226	methyltransferase
AT570_11240	COG4106	trans-aconitate 2-methyltransferase activity
AT570_11255	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AT570_11260	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AT570_11265	COG0009	L-threonylcarbamoyladenylate synthase
AT570_11270	COG3101	peptidyl-lysine hydroxylation
AT570_11275	COG1399	metal-binding, possibly nucleic acid-binding protein
AT570_11300	COG1652	LysM domain
AT570_11305	COG0352	thiamine-phosphate diphosphorylase activity
AT570_11305	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AT570_11305	COG0351	phosphomethylpyrimidine kinase
AT570_11315	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AT570_11345	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AT570_11375	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
AT570_11390	COG0358	DNA primase activity
AT570_11400	COG0564	pseudouridine synthase activity
AT570_11425	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AT570_11445	COG0583	DNA-binding transcription factor activity
AT570_11450	COG0473	3-isopropylmalate dehydrogenase activity
AT570_11470	COG1012	belongs to the aldehyde dehydrogenase family
AT570_11490	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AT570_11490	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AT570_11550	COG0456	acetyltransferase
AT570_11560	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
AT570_11565	COG0492	ferredoxin-NADP+ reductase activity
AT570_11570	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AT570_11570	COG1674	ftsk spoiiie
AT570_11575	COG1280	lysine exporter protein (LysE YggA)
AT570_11590	COG2894	cell division
AT570_11605	COG0204	Acyl-transferase
AT570_11610	COG2885	chlorophyll binding
AT570_11615	COG0210	DNA helicase
AT570_11625	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AT570_11640	COG0121	glutamine amidotransferase
AT570_11665	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AT570_11670	COG0735	belongs to the Fur family
AT570_11695	COG0420	3'-5' exonuclease activity
AT570_11715	COG1090	epimerase
AT570_11730	COG2050	protein possibly involved in aromatic compounds catabolism
AT570_11740	COG2814	Major facilitator Superfamily
AT570_11745	COG0405	Gamma-glutamyltransferase
AT570_11790	COG0477	Major facilitator Superfamily
AT570_11795	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AT570_11820	COG0531	amino acid
AT570_11825	COG2040	homocysteine
AT570_11850	COG1309	transcriptional regulator
AT570_11855	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AT570_11860	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AT570_11870	COG1607	acyl-coa hydrolase
AT570_11880	COG0523	cobalamin synthesis protein
AT570_11890	COG4681	YaeQ
AT570_11900	COG1649	PFAM Uncharacterised BCR, COG1649
AT570_11900	COG0726	polysaccharide deacetylase
AT570_11905	COG1215	transferase activity, transferring glycosyl groups
AT570_11915	COG1024	Enoyl-CoA hydratase
AT570_11930	COG1414	Transcriptional regulator
AT570_11950	COG1028	Short-chain dehydrogenase reductase Sdr
AT570_11960	COG0446	pyridine nucleotide-disulphide oxidoreductase
AT570_11965	COG2271	Major facilitator Superfamily
AT570_11975	COG2267	carboxylic ester hydrolase activity
AT570_11980	COG1028	Short-chain dehydrogenase reductase Sdr
AT570_11995	COG0028	Belongs to the TPP enzyme family
AT570_12005	COG0477	Major facilitator Superfamily
AT570_12010	COG0242	peptide deformylase activity
AT570_12015	COG2066	Belongs to the glutaminase family
AT570_12020	COG2207	Transcriptional regulator
AT570_12025	COG2223	nitrite transmembrane transporter activity
AT570_12050	COG0583	DNA-binding transcription factor activity
AT570_12055	COG1028	Short-chain dehydrogenase reductase Sdr
AT570_12060	COG2271	Major facilitator Superfamily
AT570_12065	COG3959	Transketolase, thiamine diphosphate binding domain
AT570_12070	COG3958	Transketolase
AT570_12080	COG0306	phosphate transporter
AT570_12095	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AT570_12140	COG4181	ATPase activity
AT570_12145	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
AT570_12170	COG0583	DNA-binding transcription factor activity
AT570_12180	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AT570_12185	COG1773	rubredoxin
AT570_12230	COG2851	Citrate transporter
AT570_12240	COG1253	flavin adenine dinucleotide binding
AT570_12285	COG0804	urea catabolic process
AT570_12295	COG0830	nickel cation binding
AT570_12310	COG0742	ribosomal rna small subunit methyltransferase
AT570_12315	COG0768	penicillin binding
AT570_12335	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AT570_12340	COG2878	Part of a membrane complex involved in electron transport
AT570_12345	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AT570_12355	COG3384	dioxygenase
AT570_12380	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AT570_12415	COG0006	proline dipeptidase activity
AT570_12420	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AT570_12425	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AT570_12445	COG1279	arginine transmembrane transporter activity
AT570_12450	COG0583	DNA-binding transcription factor activity
AT570_12490	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AT570_12495	COG0741	lytic transglycosylase activity
AT570_12495	COG1388	LysM domain
AT570_12495	COG0741	lytic transglycosylase activity
AT570_12495	COG1388	LysM domain
AT570_12505	COG4174	ABC transporter (Permease)
AT570_12510	COG4239	(ABC) transporter, permease
AT570_12515	COG4172	Belongs to the ABC transporter superfamily
AT570_12535	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AT570_12545	COG5001	Diguanylate cyclase
AT570_12545	COG2203	Gaf domain
AT570_12545	COG4251	negative regulation of phosphorylation
AT570_12545	COG3706	GGDEF domain
AT570_12560	COG1902	pentaerythritol trinitrate reductase activity
AT570_12560	COG0446	pyridine nucleotide-disulphide oxidoreductase
AT570_12610	COG0251	oxidation-reduction process
AT570_12620	COG0583	DNA-binding transcription factor activity
AT570_12670	COG1113	amino acid transport
AT570_12680	COG0531	amino acid
AT570_12700	COG1012	belongs to the aldehyde dehydrogenase family
AT570_12720	COG1113	amino acid transport
AT570_12750	COG0697	spore germination
AT570_12755	COG2721	sulfolactate sulfo-lyase activity
AT570_12760	COG2271	Major facilitator Superfamily
AT570_12765	COG4948	Mandelate Racemase Muconate Lactonizing
AT570_12775	COG1012	belongs to the aldehyde dehydrogenase family
AT570_12780	COG2186	Transcriptional regulator
AT570_12805	COG1960	acyl-CoA dehydrogenase activity
AT570_12815	COG1012	belongs to the aldehyde dehydrogenase family
AT570_12820	COG1024	Enoyl-CoA hydratase
AT570_12825	COG2814	Major facilitator Superfamily
AT570_12840	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AT570_12885	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
AT570_12890	COG2072	flavoprotein involved in K transport
AT570_12895	COG0300	oxidoreductase activity
AT570_12905	COG1309	transcriptional regulator
AT570_12910	COG1741	Belongs to the pirin family
AT570_12925	COG2072	flavoprotein involved in K transport
AT570_12935	COG2252	PERMEase
AT570_12940	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AT570_12945	COG3038	cytochrome b561
AT570_12955	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AT570_13015	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AT570_13020	COG4197	protein conserved in bacteria, prophage-related
AT570_13100	COG5410	chromosome segregation
AT570_13105	COG3567	Phage-associated protein, HI1409 family
AT570_13130	COG3566	protein conserved in bacteria
AT570_13265	COG0582	viral genome integration into host DNA
AT570_13285	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AT570_13300	COG0667	Aldo Keto reductase
AT570_13310	COG1765	OsmC-like protein
AT570_13360	COG2885	chlorophyll binding
AT570_13370	COG0625	glutathione transferase activity
AT570_13375	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AT570_13395	COG3634	alkyl hydroperoxide reductase activity
AT570_13405	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AT570_13415	COG0450	alkyl hydroperoxide reductase
AT570_13420	COG1643	Atp-dependent helicase
AT570_13435	COG2814	Major facilitator Superfamily
AT570_13440	COG3135	benzoate transporter
AT570_13445	COG1028	Short-chain dehydrogenase reductase Sdr
AT570_13450	COG0633	Ferredoxin
AT570_13450	COG0543	2 iron, 2 sulfur cluster binding
AT570_13455	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
AT570_13460	COG4638	Rieske (2fe-2S)
AT570_13465	COG0583	DNA-binding transcription factor activity
AT570_13520	COG1570	exodeoxyribonuclease VII activity
AT570_13555	COG1280	lysine exporter protein (LysE YggA)
AT570_13560	COG1278	Cold shock
AT570_13595	COG2814	Major facilitator Superfamily
AT570_13600	COG1733	regulation of RNA biosynthetic process
AT570_13635	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AT570_13635	COG0517	IMP dehydrogenase activity
AT570_13640	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
AT570_13650	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AT570_13655	COG1137	ATPase activity
AT570_13660	COG1538	Outer membrane efflux protein
AT570_13700	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
AT570_13715	COG1522	sequence-specific DNA binding
AT570_13720	COG5006	permease, DMT superfamily
AT570_13730	COG1560	Kdo2-lipid A biosynthetic process
AT570_13735	COG0598	Magnesium transport protein CorA
AT570_13755	COG2814	Major facilitator Superfamily
AT570_13775	COG1250	3-hydroxyacyl-CoA dehydrogenase
AT570_13810	COG0583	DNA-binding transcription factor activity
AT570_13820	COG1914	H( )-stimulated, divalent metal cation uptake system
AT570_13840	COG4770	biotin carboxylase activity
AT570_13845	COG0038	chloride channel
AT570_13865	COG1309	transcriptional regulator
AT570_13875	COG1063	alcohol dehydrogenase
AT570_13890	COG0439	Biotin carboxylase
AT570_13895	COG2249	NAD(P)H dehydrogenase (quinone) activity
AT570_13900	COG1733	regulation of RNA biosynthetic process
AT570_13910	COG0864	Transcriptional regulator
AT570_13920	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT570_13925	COG1116	anion transmembrane transporter activity
AT570_13950	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AT570_14005	COG2885	chlorophyll binding
AT570_14005	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AT570_14045	COG0583	DNA-binding transcription factor activity
AT570_14055	COG0590	tRNA wobble adenosine to inosine editing
AT570_14060	COG2807	transmembrane transport
AT570_14075	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AT570_14085	COG0789	Transcriptional regulator
AT570_14100	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AT570_14120	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT570_14145	COG1012	belongs to the aldehyde dehydrogenase family
AT570_14150	COG0531	amino acid
AT570_14155	COG1760	l-serine dehydratase
AT570_14160	COG1012	belongs to the aldehyde dehydrogenase family
AT570_14160	COG2030	dehydratase
AT570_14165	COG3396	Phenylacetate-CoA oxygenase
AT570_14170	COG3460	Phenylacetate-CoA oxygenase
AT570_14175	COG3396	Phenylacetate-CoA oxygenase
AT570_14180	COG2151	metal-sulfur cluster biosynthetic enzyme
AT570_14185	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AT570_14190	COG1024	Enoyl-CoA hydratase
AT570_14195	COG1024	Enoyl-CoA hydratase
AT570_14200	COG1250	3-hydroxyacyl-CoA dehydrogenase
AT570_14205	COG0183	Belongs to the thiolase family
AT570_14210	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
AT570_14215	COG3327	negative regulation of DNA-templated transcription, initiation
AT570_14225	COG2050	protein possibly involved in aromatic compounds catabolism
AT570_14265	COG0753	catalase activity
AT570_14270	COG3038	cytochrome b561
AT570_14275	COG0583	DNA-binding transcription factor activity
AT570_14285	COG1414	Transcriptional regulator
AT570_14290	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AT570_14305	COG1840	ABC-type Fe3 transport system, periplasmic component
AT570_14310	COG3842	ATPase activity
AT570_14325	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AT570_14330	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AT570_14335	COG1280	lysine exporter protein (LysE YggA)
AT570_14350	COG0583	DNA-binding transcription factor activity
AT570_14365	COG1024	Enoyl-CoA hydratase
AT570_14370	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AT570_14375	COG1960	acyl-CoA dehydrogenase activity
AT570_14380	COG1309	transcriptional regulator
AT570_14385	COG0318	PFAM AMP-dependent synthetase and ligase
AT570_14405	COG0583	DNA-binding transcription factor activity
AT570_14450	COG1028	Short-chain dehydrogenase reductase Sdr
AT570_14490	COG0784	Response regulator, receiver
AT570_14490	COG2205	protein histidine kinase activity
AT570_14505	COG0765	amino acid transport
AT570_14510	COG0765	amino acid transport
AT570_14520	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT570_14525	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT570_14540	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AT570_14545	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AT570_14550	COG1045	serine acetyltransferase
AT570_14565	COG0583	DNA-binding transcription factor activity
AT570_14570	COG0625	glutathione transferase activity
AT570_14575	COG0625	glutathione transferase activity
AT570_14580	COG0583	DNA-binding transcription factor activity
AT570_14590	COG1346	cytolysis
AT570_14595	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AT570_14610	COG2814	Major facilitator Superfamily
AT570_14620	COG0583	DNA-binding transcription factor activity
AT570_14630	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
AT570_14635	COG3052	prosthetic group binding
AT570_14655	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AT570_14675	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AT570_14680	COG1294	oxidase, subunit
AT570_14685	COG1271	oxidase subunit
AT570_14710	COG0477	Major facilitator Superfamily
AT570_14720	COG4521	taurine ABC transporter
AT570_14725	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
AT570_14730	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AT570_14735	COG2175	clavaminate synthase activity
AT570_14745	COG1953	Uracil, thiamine, allantoin
AT570_14755	COG0583	DNA-binding transcription factor activity
AT570_14765	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AT570_14780	COG0640	Transcriptional regulator
AT570_14785	COG0798	PFAM Bile acid sodium symporter
AT570_14790	COG0583	DNA-binding transcription factor activity
AT570_14805	COG3634	alkyl hydroperoxide reductase activity
AT570_14840	COG1301	dicarboxylic acid transport
AT570_14845	COG0436	Aminotransferase
AT570_14855	COG0386	Belongs to the glutathione peroxidase family
AT570_14895	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
AT570_14920	COG0012	GTP binding
AT570_14925	COG2011	ABC-type metal ion transport system permease component
AT570_14930	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AT570_14940	COG1464	Belongs to the NlpA lipoprotein family
AT570_14970	COG0765	amino acid transport
AT570_14975	COG0765	amino acid transport
AT570_14980	COG1126	abc transporter atp-binding protein
AT570_14990	COG1522	sequence-specific DNA binding
AT570_15005	COG1309	transcriptional regulator
AT570_15025	COG0583	DNA-binding transcription factor activity
AT570_15035	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
AT570_15045	COG0697	spore germination
AT570_15075	COG3121	Chaperone
AT570_15080	COG3539	Fimbrial protein
AT570_15105	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AT570_15105	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AT570_15150	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AT570_15160	COG2353	YceI-like domain
AT570_15170	COG3698	Phosphodiester glycosidase
AT570_15185	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AT570_15190	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AT570_15190	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AT570_15190	COG0506	proline dehydrogenase activity
AT570_15200	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AT570_15205	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AT570_15225	COG1132	(ABC) transporter
AT570_15230	COG3122	Protein conserved in bacteria
AT570_15235	COG3619	membrane
AT570_15245	COG0640	Transcriptional regulator
AT570_15255	COG2850	peptidyl-arginine hydroxylation
AT570_15260	COG0424	maF-like protein
AT570_15280	COG0191	fructose-bisphosphate aldolase activity
AT570_15285	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AT570_15300	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AT570_15310	COG1192	Involved in chromosome partitioning
AT570_15315	COG1475	DNA binding
AT570_15320	COG0811	peptide transport
AT570_15330	COG1132	(ABC) transporter
AT570_15335	COG1663	tetraacyldisaccharide 4'-kinase activity
AT570_15355	COG0084	hydrolase, TatD family'
AT570_15400	COG0590	tRNA wobble adenosine to inosine editing
AT570_15420	COG0776	regulation of translation
AT570_15450	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AT570_15525	COG0305	Participates in initiation and elongation during chromosome replication
AT570_15610	COG4695	Portal protein
AT570_15720	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AT570_15765	COG0339	signal peptide processing
AT570_15775	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT570_15810	COG0702	epimerase
AT570_15815	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AT570_15835	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AT570_15865	COG0316	Belongs to the HesB IscA family
AT570_15870	COG0822	iron-sulfur transferase activity
AT570_15895	COG0776	regulation of translation
AT570_15905	COG2207	Transcriptional regulator
AT570_15910	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AT570_15915	COG1960	acyl-CoA dehydrogenase activity
AT570_15920	COG1960	acyl-CoA dehydrogenase activity
AT570_15935	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AT570_15950	COG2814	Major facilitator Superfamily
AT570_15955	COG4264	IucA IucC family
AT570_15960	COG4264	IucA IucC family
AT570_15970	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AT570_16020	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
AT570_16025	COG0406	alpha-ribazole phosphatase activity
AT570_16040	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AT570_16045	COG0730	response to heat
AT570_16065	COG4773	Receptor
AT570_16070	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AT570_16085	COG1131	(ABC) transporter
AT570_16090	COG0842	Transport permease protein
AT570_16095	COG0842	Transport permease protein
AT570_16150	COG2226	methyltransferase
AT570_16175	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AT570_16180	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AT570_16205	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AT570_16215	COG0133	tryptophan synthase activity
AT570_16230	COG3706	GGDEF domain
AT570_16245	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AT570_16250	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AT570_16255	COG0022	dehydrogenase e1 component
AT570_16260	COG0508	dehydrogenase complex catalyzes the overall conversion of
AT570_16265	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AT570_16275	COG1063	alcohol dehydrogenase
AT570_16280	COG3781	membrane
AT570_16290	COG3453	Protein conserved in bacteria
AT570_16290	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AT570_16300	COG0730	response to heat
AT570_16315	COG3708	Transcriptional regulator
AT570_16315	COG2207	Transcriptional regulator
AT570_16320	COG1733	regulation of RNA biosynthetic process
AT570_16325	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AT570_16350	COG4521	taurine ABC transporter
AT570_16355	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AT570_16375	COG0477	Major facilitator Superfamily
AT570_16385	COG1027	Aspartate ammonia-lyase
AT570_16400	COG0583	DNA-binding transcription factor activity
AT570_16405	COG0583	DNA-binding transcription factor activity
AT570_16410	COG0183	Belongs to the thiolase family
AT570_16415	COG2031	fatty acid transporter
AT570_16430	COG0583	DNA-binding transcription factor activity
AT570_16450	COG1309	transcriptional regulator
AT570_16460	COG2610	gluconate transmembrane transporter activity
AT570_16465	COG1028	Short-chain dehydrogenase reductase Sdr
AT570_16470	COG2207	Transcriptional regulator
AT570_16480	COG0412	Dienelactone hydrolase
AT570_16485	COG1028	Short-chain dehydrogenase reductase Sdr
AT570_16495	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AT570_16530	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AT570_16535	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT570_16540	COG0745	RESPONSE REGULATOR receiver
AT570_16545	COG2205	protein histidine kinase activity
AT570_16560	COG2207	Transcriptional regulator
AT570_16610	COG2856	Zn peptidase
AT570_16650	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
AT570_16745	COG1120	ATPase activity
AT570_16760	COG1064	alcohol dehydrogenase
AT570_16765	COG2207	Transcriptional regulator
AT570_16770	COG2084	Dehydrogenase
AT570_16780	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AT570_16785	COG0583	DNA-binding transcription factor activity
AT570_16795	COG0129	dihydroxy-acid dehydratase activity
AT570_16800	COG1012	belongs to the aldehyde dehydrogenase family
AT570_16815	COG1566	PFAM secretion protein HlyD family protein
AT570_16830	COG0583	DNA-binding transcription factor activity
AT570_16925	COG0318	PFAM AMP-dependent synthetase and ligase
AT570_16935	COG1960	acyl-CoA dehydrogenase activity
AT570_16945	COG1028	Short-chain dehydrogenase reductase Sdr
AT570_16950	COG1028	Short-chain dehydrogenase reductase Sdr
AT570_16955	COG1028	Short-chain dehydrogenase reductase Sdr
AT570_16960	COG0583	DNA-binding transcription factor activity
AT570_16965	COG1309	transcriptional regulator
AT570_16990	COG0789	Transcriptional regulator
AT570_17000	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AT570_17010	COG0446	pyridine nucleotide-disulphide oxidoreductase
AT570_17010	COG1902	pentaerythritol trinitrate reductase activity
AT570_17025	COG1012	belongs to the aldehyde dehydrogenase family
AT570_17045	COG2186	Transcriptional regulator
AT570_17055	COG0583	DNA-binding transcription factor activity
AT570_17060	COG4948	Mandelate Racemase Muconate Lactonizing
AT570_17065	COG4829	muconolactone delta-isomerase
AT570_17075	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AT570_17080	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AT570_17085	COG0183	Belongs to the thiolase family
AT570_17090	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AT570_17100	COG1012	belongs to the aldehyde dehydrogenase family
AT570_17110	COG3733	amine oxidase
AT570_17120	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AT570_17130	COG1028	Short-chain dehydrogenase reductase Sdr
AT570_17140	COG4638	Rieske (2fe-2S)
AT570_17160	COG0154	amidase activity
AT570_17170	COG2814	Major facilitator Superfamily
AT570_17195	COG1960	acyl-CoA dehydrogenase activity
AT570_17200	COG0583	DNA-binding transcription factor activity
AT570_17205	COG1414	Transcriptional regulator
AT570_17220	COG2391	methyltransferase activity
AT570_17230	COG4993	Dehydrogenase
AT570_17235	COG3659	wide pore channel activity
AT570_17240	COG3420	alginic acid biosynthetic process
AT570_17245	COG0710	3-dehydroquinate dehydratase activity
AT570_17250	COG3485	protocatechuate 3,4-dioxygenase
AT570_17255	COG3485	protocatechuate 3,4-dioxygenase
AT570_17260	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AT570_17265	COG2271	Major facilitator Superfamily
AT570_17270	COG0596	Alpha beta hydrolase
AT570_17275	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AT570_17280	COG0183	Belongs to the thiolase family
AT570_17285	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AT570_17290	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AT570_17300	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
AT570_17305	COG2323	membrane
AT570_17350	COG0446	pyridine nucleotide-disulphide oxidoreductase
AT570_17350	COG1902	pentaerythritol trinitrate reductase activity
AT570_17365	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AT570_17375	COG0542	response to heat
AT570_17380	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AT570_17410	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AT570_17415	COG0569	domain protein
AT570_17420	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AT570_17435	COG4774	siderophore transport
AT570_17440	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT570_17450	COG1585	Membrane protein implicated in regulation of membrane protease activity
AT570_17465	COG1294	oxidase, subunit
AT570_17470	COG4890	Cyd operon protein YbgT
AT570_17485	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
AT570_17495	COG0552	protein localization to endoplasmic reticulum
AT570_17525	COG0517	IMP dehydrogenase activity
AT570_17525	COG0516	GMP reductase activity
AT570_17530	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AT570_17535	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AT570_17545	COG0583	DNA-binding transcription factor activity
AT570_17550	COG0024	Methionine aminopeptidase
AT570_17580	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AT570_17580	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AT570_17585	COG1105	Belongs to the carbohydrate kinase PfkB family
AT570_17590	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AT570_17590	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
AT570_17590	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AT570_17605	COG5001	Diguanylate cyclase
AT570_17605	COG3300	MHYT domain
AT570_17620	COG2135	peptidase activity
AT570_17625	COG0659	secondary active sulfate transmembrane transporter activity
AT570_17640	COG1113	amino acid transport
AT570_17650	COG1522	sequence-specific DNA binding
AT570_17675	COG1011	Hydrolase
AT570_17680	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AT570_17690	COG2137	regulation of response to DNA damage stimulus
AT570_17705	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AT570_17725	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AT570_17740	COG0575	Belongs to the CDS family
AT570_17745	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AT570_17765	COG3852	Histidine kinase
AT570_17770	COG2204	response regulator
AT570_17830	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AT570_17835	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
AT570_17855	COG0697	spore germination
AT570_17860	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AT570_17870	COG0303	'Molybdopterin
AT570_17875	COG0315	cyclic pyranopterin monophosphate synthase activity
AT570_17875	COG0521	Mo-molybdopterin cofactor biosynthetic process
AT570_17890	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AT570_17895	COG0243	molybdopterin cofactor binding
AT570_17905	COG0243	molybdopterin cofactor binding
AT570_17910	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AT570_17915	COG2146	nitrite reductase [NAD(P)H] activity
AT570_17915	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AT570_17925	COG0745	RESPONSE REGULATOR receiver
AT570_17930	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AT570_17930	COG1116	anion transmembrane transporter activity
AT570_17945	COG0511	ligase activity, forming carbon-carbon bonds
AT570_17960	COG2814	Major facilitator Superfamily
AT570_17975	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AT570_18040	COG1598	PFAM Uncharacterised protein family UPF0150
AT570_18150	COG5410	chromosome segregation
AT570_18185	COG3617	BRO family, N-terminal domain
AT570_18330	COG0069	glutamate synthase activity
AT570_18350	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AT570_18360	COG1454	alcohol dehydrogenase
AT570_18365	COG0824	Thioesterase
AT570_18375	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AT570_18405	COG0183	Belongs to the thiolase family
AT570_18415	COG0583	DNA-binding transcription factor activity
AT570_18430	COG1522	sequence-specific DNA binding
AT570_18435	COG3135	benzoate transporter
AT570_18445	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AT570_18460	COG0589	response to stress
AT570_18465	COG0488	(ABC) transporter
AT570_18480	COG4773	Receptor
AT570_18510	COG0668	transmembrane transport
AT570_18520	COG1309	transcriptional regulator
AT570_18540	COG1605	Chorismate mutase
AT570_18580	COG0308	aminopeptidase N
AT570_18605	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AT570_18610	COG1454	alcohol dehydrogenase
AT570_18630	COG0531	amino acid
AT570_18635	COG4303	Ethanolamine ammonia lyase large subunit
AT570_18640	COG4302	ethanolamine ammonia-lyase activity
AT570_18645	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AT570_18645	COG0519	Catalyzes the synthesis of GMP from XMP
AT570_18675	COG0697	spore germination
AT570_18680	COG1923	regulation of RNA biosynthetic process
AT570_18690	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AT570_18695	COG0802	atpase or kinase
AT570_18715	COG1187	pseudouridine synthase activity
AT570_18730	COG0583	DNA-binding transcription factor activity
AT570_18745	COG2814	Major facilitator Superfamily
AT570_18750	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AT570_18780	COG0729	surface antigen
AT570_18800	COG0174	glutamine synthetase
AT570_18805	COG0745	RESPONSE REGULATOR receiver
AT570_18810	COG2205	protein histidine kinase activity
AT570_18815	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
AT570_18820	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
AT570_18825	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
AT570_18835	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AT570_18850	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AT570_18855	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AT570_18860	COG1960	acyl-CoA dehydrogenase activity
AT570_18890	COG0583	DNA-binding transcription factor activity
AT570_18910	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AT570_18920	COG3658	cytochrome
AT570_18925	COG1215	transferase activity, transferring glycosyl groups
AT570_18930	COG0726	polysaccharide deacetylase
AT570_18930	COG1649	PFAM Uncharacterised BCR, COG1649
AT570_18955	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AT570_18960	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AT570_18970	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AT570_18995	COG0305	Participates in initiation and elongation during chromosome replication
AT570_19000	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AT570_19010	COG1305	Transglutaminase-like
AT570_19020	COG2308	Evidence 4 Homologs of previously reported genes of
AT570_19050	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
AT570_19055	COG0138	bifunctional purine biosynthesis protein purh
AT570_19060	COG0151	Belongs to the GarS family
AT570_19065	COG1464	Belongs to the NlpA lipoprotein family
AT570_19070	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AT570_19075	COG2011	ABC-type metal ion transport system permease component
AT570_19080	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AT570_19090	COG1301	dicarboxylic acid transport
AT570_19120	COG1794	racemase activity, acting on amino acids and derivatives
AT570_19135	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AT570_19135	COG3008	intermembrane lipid transfer
AT570_19140	COG2995	paraquat-inducible protein a
AT570_19170	COG1051	belongs to the nudix hydrolase family
AT570_19175	COG0477	Major facilitator Superfamily
AT570_19225	COG2186	Transcriptional regulator
AT570_19235	COG0786	glutamate:sodium symporter activity