CTY05_00013	PWY-7883	CTY05_00013
CTY05_00023	PWY-5101	L-isoleucine biosynthesis II
CTY05_00023	PWY-5103	L-isoleucine biosynthesis III
CTY05_00023	PWY-5104	L-isoleucine biosynthesis IV
CTY05_00023	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CTY05_00028	PWY-1622	formaldehyde assimilation I (serine pathway)
CTY05_00028	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CTY05_00028	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_00028	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_00028	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
CTY05_00028	PWY-6549	L-glutamine biosynthesis III
CTY05_00028	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CTY05_00028	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CTY05_00028	PWY-7124	ethylene biosynthesis V (engineered)
CTY05_00035	PWY-2941	L-lysine biosynthesis II
CTY05_00035	PWY-2942	L-lysine biosynthesis III
CTY05_00035	PWY-5097	L-lysine biosynthesis VI
CTY05_00055	PWY-6123	inosine-5'-phosphate biosynthesis I
CTY05_00055	PWY-6124	inosine-5'-phosphate biosynthesis II
CTY05_00055	PWY-7234	inosine-5'-phosphate biosynthesis III
CTY05_00057	PWY-2941	L-lysine biosynthesis II
CTY05_00057	PWY-2942	L-lysine biosynthesis III
CTY05_00057	PWY-5097	L-lysine biosynthesis VI
CTY05_00068	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTY05_00073	PWY-5028	L-histidine degradation II
CTY05_00073	PWY-5030	L-histidine degradation III
CTY05_00074	PWY-5028	L-histidine degradation II
CTY05_00074	PWY-5030	L-histidine degradation III
CTY05_00076	PWY-5028	L-histidine degradation II
CTY05_00076	PWY-5030	L-histidine degradation III
CTY05_00080	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_00080	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_00085	PWY-6749	CMP-legionaminate biosynthesis I
CTY05_00086	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CTY05_00087	PWY-5269	cardiolipin biosynthesis II
CTY05_00087	PWY-5668	cardiolipin biosynthesis I
CTY05_00087	PWY-7817	CTY05_00087
CTY05_00088	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CTY05_00088	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CTY05_00088	PWY-6896	thiamin salvage I
CTY05_00088	PWY-6897	thiamin salvage II
CTY05_00090	PWY-6167	flavin biosynthesis II (archaea)
CTY05_00090	PWY-6168	flavin biosynthesis III (fungi)
CTY05_00091	PWY-6167	flavin biosynthesis II (archaea)
CTY05_00091	PWY-6168	flavin biosynthesis III (fungi)
CTY05_00091	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CTY05_00091	PWY-7991	CTY05_00091
CTY05_00097	PWY-5381	pyridine nucleotide cycling (plants)
CTY05_00098	PWY-5350	thiosulfate disproportionation III (rhodanese)
CTY05_00098	PWY-7927	CTY05_00098
CTY05_00099	PWY-5669	phosphatidylethanolamine biosynthesis I
CTY05_00110	PWY-6840	homoglutathione biosynthesis
CTY05_00110	PWY-7255	ergothioneine biosynthesis I (bacteria)
CTY05_00121	PWY-5694	allantoin degradation to glyoxylate I
CTY05_00121	PWY-5705	allantoin degradation to glyoxylate III
CTY05_00122	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
CTY05_00126	PWY-5691	urate degradation to allantoin I
CTY05_00126	PWY-7394	urate degradation to allantoin II
CTY05_00126	PWY-7849	CTY05_00126
CTY05_00127	PWY-5691	urate degradation to allantoin I
CTY05_00127	PWY-7394	urate degradation to allantoin II
CTY05_00127	PWY-7849	CTY05_00127
CTY05_00138	PWY-5686	UMP biosynthesis
CTY05_00138	PWY-7790	CTY05_00138
CTY05_00138	PWY-7791	CTY05_00138
CTY05_00142	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTY05_00142	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CTY05_00142	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTY05_00142	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTY05_00143	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_00143	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_00143	PWY-7953	CTY05_00143
CTY05_00144	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_00144	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_00144	PWY-7953	CTY05_00144
CTY05_00151	PWY-6891	thiazole biosynthesis II (Bacillus)
CTY05_00151	PWY-6892	thiazole biosynthesis I (E. coli)
CTY05_00151	PWY-7560	methylerythritol phosphate pathway II
CTY05_00158	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CTY05_00158	PWY-6596	adenosine nucleotides degradation I
CTY05_00158	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_00159	PWY-6749	CMP-legionaminate biosynthesis I
CTY05_00160	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CTY05_00160	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CTY05_00161	PWY-7805	CTY05_00161
CTY05_00161	PWY-7807	CTY05_00161
CTY05_00167	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
CTY05_00171	PWY-5108	L-isoleucine biosynthesis V
CTY05_00171	PWY-5132	humulone biosynthesis
CTY05_00171	PWY-5133	cohumulone biosynthesis
CTY05_00171	PWY-6672	<i>cis</i>-genanyl-CoA degradation
CTY05_00171	PWY-7118	chitin degradation to ethanol
CTY05_00171	PWY-7857	CTY05_00171
CTY05_00174	PWY-6059	dimethyl sulfide degradation II (oxidation)
CTY05_00190	PWY-6899	base-degraded thiamin salvage
CTY05_00190	PWY-7356	thiamin salvage IV (yeast)
CTY05_00206	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CTY05_00270	PWY-702	L-methionine biosynthesis II
CTY05_00288	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CTY05_00288	PWY-5743	3-hydroxypropanoate cycle
CTY05_00288	PWY-5744	glyoxylate assimilation
CTY05_00288	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_00288	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_00288	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CTY05_00288	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CTY05_00307	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTY05_00312	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTY05_00312	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTY05_00314	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_00314	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_00314	PWY-7953	CTY05_00314
CTY05_00315	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTY05_00315	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTY05_00315	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTY05_00318	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTY05_00318	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CTY05_00318	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTY05_00318	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTY05_00324	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTY05_00325	PWY-6164	3-dehydroquinate biosynthesis I
CTY05_00340	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_00341	PWY-7560	methylerythritol phosphate pathway II
CTY05_00351	PWY-6829	tRNA methylation (yeast)
CTY05_00351	PWY-7285	methylwyosine biosynthesis
CTY05_00351	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CTY05_00368	PWY-6854	ethylene biosynthesis III (microbes)
CTY05_00403	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTY05_00404	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CTY05_00405	PWY-6168	flavin biosynthesis III (fungi)
CTY05_00405	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CTY05_00405	PWY-7991	CTY05_00405
CTY05_00406	PWY-6891	thiazole biosynthesis II (Bacillus)
CTY05_00406	PWY-6892	thiazole biosynthesis I (E. coli)
CTY05_00406	PWY-7560	methylerythritol phosphate pathway II
CTY05_00407	PWY-2301	<i>myo</i>-inositol biosynthesis
CTY05_00407	PWY-4702	phytate degradation I
CTY05_00407	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
CTY05_00422	PWY-5667	CDP-diacylglycerol biosynthesis I
CTY05_00422	PWY-6453	stigma estolide biosynthesis
CTY05_00422	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CTY05_00422	PWY-7587	oleate biosynthesis III (cyanobacteria)
CTY05_00484	PWY-7731	CTY05_00484
CTY05_00494	PWY-1622	formaldehyde assimilation I (serine pathway)
CTY05_00494	PWY-5392	reductive TCA cycle II
CTY05_00494	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTY05_00494	PWY-5690	TCA cycle II (plants and fungi)
CTY05_00494	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_00494	PWY-6728	methylaspartate cycle
CTY05_00494	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_00494	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CTY05_00494	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTY05_00499	PWY-5669	phosphatidylethanolamine biosynthesis I
CTY05_00503	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CTY05_00509	PWY-4381	fatty acid biosynthesis initiation I
CTY05_00509	PWY-5743	3-hydroxypropanoate cycle
CTY05_00509	PWY-5744	glyoxylate assimilation
CTY05_00509	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_00509	PWY-6722	candicidin biosynthesis
CTY05_00542	PWY-7892	CTY05_00542
CTY05_00549	PWY-7851	CTY05_00549
CTY05_00553	PWY-6700	queuosine biosynthesis
CTY05_00556	PWY-6700	queuosine biosynthesis
CTY05_00560	PWY-5057	L-valine degradation II
CTY05_00560	PWY-5076	L-leucine degradation III
CTY05_00560	PWY-5078	L-isoleucine degradation II
CTY05_00560	PWY-5101	L-isoleucine biosynthesis II
CTY05_00560	PWY-5103	L-isoleucine biosynthesis III
CTY05_00560	PWY-5104	L-isoleucine biosynthesis IV
CTY05_00560	PWY-5108	L-isoleucine biosynthesis V
CTY05_00560	PWY-7767	CTY05_00560
CTY05_00584	PWY-5987	sorgoleone biosynthesis
CTY05_00584	PWY-5996	oleate biosynthesis II (animals and fungi)
CTY05_00596	PWY-4381	fatty acid biosynthesis initiation I
CTY05_00596	PWY-5743	3-hydroxypropanoate cycle
CTY05_00596	PWY-5744	glyoxylate assimilation
CTY05_00596	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_00596	PWY-6722	candicidin biosynthesis
CTY05_00597	PWY-2161	folate polyglutamylation
CTY05_00610	PWY-1361	benzoyl-CoA degradation I (aerobic)
CTY05_00610	PWY-5109	2-methylbutanoate biosynthesis
CTY05_00610	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CTY05_00610	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CTY05_00610	PWY-5177	glutaryl-CoA degradation
CTY05_00610	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_00610	PWY-6435	4-hydroxybenzoate biosynthesis V
CTY05_00610	PWY-6583	pyruvate fermentation to butanol I
CTY05_00610	PWY-6863	pyruvate fermentation to hexanol
CTY05_00610	PWY-6883	pyruvate fermentation to butanol II
CTY05_00610	PWY-6944	androstenedione degradation
CTY05_00610	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CTY05_00610	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CTY05_00610	PWY-7007	methyl ketone biosynthesis
CTY05_00610	PWY-7046	4-coumarate degradation (anaerobic)
CTY05_00610	PWY-7094	fatty acid salvage
CTY05_00610	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CTY05_00610	PWY-735	jasmonic acid biosynthesis
CTY05_00610	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CTY05_00610	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CTY05_00610	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CTY05_00610	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CTY05_00610	PWY-7726	CTY05_00610
CTY05_00610	PWY-7778	CTY05_00610
CTY05_00610	PWY-7779	CTY05_00610
CTY05_00616	PWY-6683	sulfate reduction III (assimilatory)
CTY05_00683	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CTY05_00700	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
CTY05_00740	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CTY05_00741	PWY-5194	siroheme biosynthesis
CTY05_00741	PWY-5196	factor 430 biosynthesis
CTY05_00741	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CTY05_00748	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CTY05_00748	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CTY05_00758	PWY-3781	aerobic respiration I (cytochrome c)
CTY05_00758	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CTY05_00758	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTY05_00758	PWY-5690	TCA cycle II (plants and fungi)
CTY05_00758	PWY-6728	methylaspartate cycle
CTY05_00758	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_00758	PWY-7254	TCA cycle VII (acetate-producers)
CTY05_00758	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CTY05_00759	PWY-3781	aerobic respiration I (cytochrome c)
CTY05_00759	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CTY05_00759	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTY05_00759	PWY-5690	TCA cycle II (plants and fungi)
CTY05_00759	PWY-6728	methylaspartate cycle
CTY05_00759	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_00759	PWY-7254	TCA cycle VII (acetate-producers)
CTY05_00759	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CTY05_00760	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CTY05_00761	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CTY05_00762	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CTY05_00762	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CTY05_00763	PWY-5392	reductive TCA cycle II
CTY05_00763	PWY-5537	pyruvate fermentation to acetate V
CTY05_00763	PWY-5538	pyruvate fermentation to acetate VI
CTY05_00763	PWY-5690	TCA cycle II (plants and fungi)
CTY05_00763	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_00763	PWY-6728	methylaspartate cycle
CTY05_00763	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_00763	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CTY05_00764	PWY-5392	reductive TCA cycle II
CTY05_00764	PWY-5537	pyruvate fermentation to acetate V
CTY05_00764	PWY-5538	pyruvate fermentation to acetate VI
CTY05_00764	PWY-5690	TCA cycle II (plants and fungi)
CTY05_00764	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_00764	PWY-6728	methylaspartate cycle
CTY05_00764	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_00764	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CTY05_00779	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_00779	PWY-5686	UMP biosynthesis
CTY05_00779	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTY05_00779	PWY-7790	CTY05_00779
CTY05_00779	PWY-7791	CTY05_00779
CTY05_00780	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_00780	PWY-5686	UMP biosynthesis
CTY05_00780	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTY05_00780	PWY-7790	CTY05_00780
CTY05_00780	PWY-7791	CTY05_00780
CTY05_00786	PWY-6614	tetrahydrofolate biosynthesis
CTY05_00793	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CTY05_00793	PWY-2201	folate transformations I
CTY05_00793	PWY-3841	folate transformations II
CTY05_00793	PWY-5030	L-histidine degradation III
CTY05_00793	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_00793	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CTY05_00793	PWY-7909	CTY05_00793
CTY05_00797	PWY-4261	glycerol degradation I
CTY05_00798	PWY-4261	glycerol degradation I
CTY05_00798	PWY-6118	glycerol-3-phosphate shuttle
CTY05_00798	PWY-6952	glycerophosphodiester degradation
CTY05_00799	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTY05_00805	PWY-7039	phosphatidate metabolism, as a signaling molecule
CTY05_00805	PWY-7817	CTY05_00805
CTY05_00817	PWY-2582	brassinosteroid biosynthesis II
CTY05_00817	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CTY05_00817	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CTY05_00817	PWY-6948	sitosterol degradation to androstenedione
CTY05_00817	PWY-699	brassinosteroid biosynthesis I
CTY05_00817	PWY-7299	progesterone biosynthesis
CTY05_00831	PWY-7511	protein ubiquitylation
CTY05_00838	PWY-2941	L-lysine biosynthesis II
CTY05_00838	PWY-2942	L-lysine biosynthesis III
CTY05_00838	PWY-5097	L-lysine biosynthesis VI
CTY05_00839	PWY-2941	L-lysine biosynthesis II
CTY05_00839	PWY-5097	L-lysine biosynthesis VI
CTY05_00865	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CTY05_00865	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CTY05_00866	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CTY05_00866	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CTY05_00866	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CTY05_00875	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_00887	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CTY05_00887	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CTY05_00887	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CTY05_00895	PWY-6482	diphthamide biosynthesis (archaea)
CTY05_00895	PWY-7546	diphthamide biosynthesis (eukaryotes)
CTY05_00897	PWY-6703	preQ<sub>0</sub> biosynthesis
CTY05_00898	PWY-6703	preQ<sub>0</sub> biosynthesis
CTY05_00907	PWY-6543	4-aminobenzoate biosynthesis
CTY05_00909	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTY05_00909	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTY05_00909	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_00909	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CTY05_00909	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTY05_00909	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTY05_00911	PWY-5316	nicotine biosynthesis
CTY05_00911	PWY-7342	superpathway of nicotine biosynthesis
CTY05_00927	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CTY05_00935	PWY-1042	glycolysis IV (plant cytosol)
CTY05_00935	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_00935	PWY-6901	superpathway of glucose and xylose degradation
CTY05_00935	PWY-7003	glycerol degradation to butanol
CTY05_00939	PWY-3341	L-proline biosynthesis III
CTY05_00939	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CTY05_00943	PWY-723	alkylnitronates degradation
CTY05_00957	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_00957	PWY-6549	L-glutamine biosynthesis III
CTY05_00957	PWY-6728	methylaspartate cycle
CTY05_00957	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_00957	PWY-7124	ethylene biosynthesis V (engineered)
CTY05_00957	PWY-7254	TCA cycle VII (acetate-producers)
CTY05_00957	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CTY05_00959	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_00959	PWY-6549	L-glutamine biosynthesis III
CTY05_00959	PWY-6728	methylaspartate cycle
CTY05_00959	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_00959	PWY-7124	ethylene biosynthesis V (engineered)
CTY05_00959	PWY-7254	TCA cycle VII (acetate-producers)
CTY05_00959	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CTY05_00978	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CTY05_00978	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CTY05_00978	PWY-6897	thiamin salvage II
CTY05_00978	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CTY05_00978	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CTY05_00978	PWY-7356	thiamin salvage IV (yeast)
CTY05_00978	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CTY05_00979	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTY05_00990	PWY-6409	pyoverdine I biosynthesis
CTY05_00990	PWY-6562	norspermidine biosynthesis
CTY05_00990	PWY-761	rhizobactin 1021 biosynthesis
CTY05_00990	PWY-7855	CTY05_00990
CTY05_00990	PWY-7988	CTY05_00990
CTY05_01003	PWY-6123	inosine-5'-phosphate biosynthesis I
CTY05_01003	PWY-6124	inosine-5'-phosphate biosynthesis II
CTY05_01003	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_01003	PWY-7234	inosine-5'-phosphate biosynthesis III
CTY05_01005	PWY-7887	CTY05_01005
CTY05_01005	PWY-7892	CTY05_01005
CTY05_01008	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTY05_01008	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTY05_01011	PWY-5381	pyridine nucleotide cycling (plants)
CTY05_01011	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CTY05_01011	PWY-6596	adenosine nucleotides degradation I
CTY05_01011	PWY-6606	guanosine nucleotides degradation II
CTY05_01011	PWY-6607	guanosine nucleotides degradation I
CTY05_01011	PWY-6608	guanosine nucleotides degradation III
CTY05_01011	PWY-7185	UTP and CTP dephosphorylation I
CTY05_01011	PWY-7821	CTY05_01011
CTY05_01016	PWY-5386	methylglyoxal degradation I
CTY05_01026	PWY-6823	molybdenum cofactor biosynthesis
CTY05_01049	PWY-6173	histamine biosynthesis
CTY05_01054	PWY-6012	acyl carrier protein metabolism I
CTY05_01054	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CTY05_01054	PWY-6289	petrobactin biosynthesis
CTY05_01055	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
CTY05_01055	PWY-5901	2,3-dihydroxybenzoate biosynthesis
CTY05_01055	PWY-6406	salicylate biosynthesis I
CTY05_01057	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CTY05_01057	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CTY05_01057	PWY-7766	CTY05_01057
CTY05_01062	PWY-5663	tetrahydrobiopterin biosynthesis I
CTY05_01062	PWY-5664	tetrahydrobiopterin biosynthesis II
CTY05_01062	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CTY05_01062	PWY-6703	preQ<sub>0</sub> biosynthesis
CTY05_01062	PWY-6983	tetrahydrobiopterin biosynthesis III
CTY05_01062	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CTY05_01062	PWY-7852	CTY05_01062
CTY05_01063	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_01063	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CTY05_01063	PWY-6538	caffeine degradation III (bacteria, via demethylation)
CTY05_01063	PWY-6596	adenosine nucleotides degradation I
CTY05_01063	PWY-6606	guanosine nucleotides degradation II
CTY05_01063	PWY-6607	guanosine nucleotides degradation I
CTY05_01063	PWY-6608	guanosine nucleotides degradation III
CTY05_01063	PWY-6999	theophylline degradation
CTY05_01064	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_01064	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CTY05_01064	PWY-6538	caffeine degradation III (bacteria, via demethylation)
CTY05_01064	PWY-6596	adenosine nucleotides degradation I
CTY05_01064	PWY-6606	guanosine nucleotides degradation II
CTY05_01064	PWY-6607	guanosine nucleotides degradation I
CTY05_01064	PWY-6608	guanosine nucleotides degradation III
CTY05_01064	PWY-6999	theophylline degradation
CTY05_01071	PWY-5958	acridone alkaloid biosynthesis
CTY05_01071	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CTY05_01071	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CTY05_01074	PWY-381	nitrate reduction II (assimilatory)
CTY05_01074	PWY-5675	nitrate reduction V (assimilatory)
CTY05_01074	PWY-6549	L-glutamine biosynthesis III
CTY05_01074	PWY-6963	ammonia assimilation cycle I
CTY05_01074	PWY-6964	ammonia assimilation cycle II
CTY05_01075	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
CTY05_01075	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
CTY05_01075	PWY-6148	tetrahydromethanopterin biosynthesis
CTY05_01075	PWY-7742	CTY05_01075
CTY05_01075	PWY-7745	CTY05_01075
CTY05_01075	PWY-7929	CTY05_01075
CTY05_01075	PWY-7934	CTY05_01075
CTY05_01075	PWY-7935	CTY05_01075
CTY05_01083	PWY-6854	ethylene biosynthesis III (microbes)
CTY05_01087	PWY-1281	sulfoacetaldehyde degradation I
CTY05_01087	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CTY05_01087	PWY-5482	pyruvate fermentation to acetate II
CTY05_01087	PWY-5485	pyruvate fermentation to acetate IV
CTY05_01087	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_01087	PWY-6637	sulfolactate degradation II
CTY05_01087	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CTY05_01090	PWY-2201	folate transformations I
CTY05_01090	PWY-3841	folate transformations II
CTY05_01091	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CTY05_01094	PWY-7094	fatty acid salvage
CTY05_01094	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CTY05_01095	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CTY05_01095	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CTY05_01101	PWY-7799	CTY05_01101
CTY05_01101	PWY-7800	CTY05_01101
CTY05_01111	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTY05_01111	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CTY05_01111	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTY05_01111	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTY05_01113	PWY-6700	queuosine biosynthesis
CTY05_01120	PWY-1622	formaldehyde assimilation I (serine pathway)
CTY05_01120	PWY-181	photorespiration
CTY05_01120	PWY-2161	folate polyglutamylation
CTY05_01120	PWY-2201	folate transformations I
CTY05_01120	PWY-3661	glycine betaine degradation I
CTY05_01120	PWY-3661-1	glycine betaine degradation II (mammalian)
CTY05_01120	PWY-3841	folate transformations II
CTY05_01120	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_01142	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CTY05_01142	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CTY05_01142	PWY-6897	thiamin salvage II
CTY05_01142	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CTY05_01142	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CTY05_01142	PWY-7356	thiamin salvage IV (yeast)
CTY05_01142	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CTY05_01144	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTY05_01144	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CTY05_01144	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTY05_01144	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTY05_01145	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CTY05_01145	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CTY05_01145	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
CTY05_01151	PWY-3461	L-tyrosine biosynthesis II
CTY05_01151	PWY-3462	L-phenylalanine biosynthesis II
CTY05_01151	PWY-6120	L-tyrosine biosynthesis III
CTY05_01151	PWY-6627	salinosporamide A biosynthesis
CTY05_01151	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
CTY05_01151	PWY-7626	bacilysin biosynthesis
CTY05_01152	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTY05_01152	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
CTY05_01158	PWY-6891	thiazole biosynthesis II (Bacillus)
CTY05_01158	PWY-6892	thiazole biosynthesis I (E. coli)
CTY05_01167	PWY-5667	CDP-diacylglycerol biosynthesis I
CTY05_01167	PWY-5981	CDP-diacylglycerol biosynthesis III
CTY05_01167	PWY-7902	CTY05_01167
CTY05_01171	PWY-5686	UMP biosynthesis
CTY05_01173	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CTY05_01173	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CTY05_01173	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CTY05_01173	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CTY05_01191	PWY-5642	2,4-dinitrotoluene degradation
CTY05_01205	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
CTY05_01205	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
CTY05_01205	PWY-7717	CTY05_01205
CTY05_01205	PWY-7733	CTY05_01205
CTY05_01205	PWY-7734	CTY05_01205
CTY05_01205	PWY-7765	CTY05_01205
CTY05_01230	PWY-5691	urate degradation to allantoin I
CTY05_01230	PWY-7394	urate degradation to allantoin II
CTY05_01230	PWY-7849	CTY05_01230
CTY05_01246	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_01246	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_01254	PWY-5386	methylglyoxal degradation I
CTY05_01258	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CTY05_01258	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CTY05_01258	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CTY05_01259	PWY-6123	inosine-5'-phosphate biosynthesis I
CTY05_01259	PWY-6124	inosine-5'-phosphate biosynthesis II
CTY05_01259	PWY-7234	inosine-5'-phosphate biosynthesis III
CTY05_01270	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTY05_01278	PWY-3781	aerobic respiration I (cytochrome c)
CTY05_01278	PWY-4521	arsenite oxidation I (respiratory)
CTY05_01278	PWY-6692	Fe(II) oxidation
CTY05_01278	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CTY05_01278	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
CTY05_01281	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_01281	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_01304	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CTY05_01304	PWY-6148	tetrahydromethanopterin biosynthesis
CTY05_01304	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CTY05_01304	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CTY05_01305	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CTY05_01305	PWY-6148	tetrahydromethanopterin biosynthesis
CTY05_01305	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CTY05_01305	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CTY05_01305	PWY-7852	CTY05_01305
CTY05_01305	PWY-7853	CTY05_01305
CTY05_01311	PWY-381	nitrate reduction II (assimilatory)
CTY05_01311	PWY-5675	nitrate reduction V (assimilatory)
CTY05_01311	PWY-6549	L-glutamine biosynthesis III
CTY05_01311	PWY-6963	ammonia assimilation cycle I
CTY05_01311	PWY-6964	ammonia assimilation cycle II
CTY05_01318	PWY-5747	2-methylcitrate cycle II
CTY05_01333	PWY-2781	<i>cis</i>-zeatin biosynthesis
CTY05_01350	PWY-6897	thiamin salvage II
CTY05_01350	PWY-7356	thiamin salvage IV (yeast)
CTY05_01350	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CTY05_01361	PWY-3461	L-tyrosine biosynthesis II
CTY05_01361	PWY-3462	L-phenylalanine biosynthesis II
CTY05_01361	PWY-6120	L-tyrosine biosynthesis III
CTY05_01361	PWY-6627	salinosporamide A biosynthesis
CTY05_01361	PWY-7626	bacilysin biosynthesis
CTY05_01389	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTY05_01389	PWY-5723	Rubisco shunt
CTY05_01400	PWY-7782	CTY05_01400
CTY05_01400	PWY-7783	CTY05_01400
CTY05_01405	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_01405	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_01405	PWY-7953	CTY05_01405
CTY05_01416	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTY05_01416	PWY-6416	quinate degradation II
CTY05_01416	PWY-6707	gallate biosynthesis
CTY05_01421	PWY-6683	sulfate reduction III (assimilatory)
CTY05_01424	PWY-5964	guanylyl molybdenum cofactor biosynthesis
CTY05_01424	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
CTY05_01426	PWY-6823	molybdenum cofactor biosynthesis
CTY05_01428	PWY-6823	molybdenum cofactor biosynthesis
CTY05_01428	PWY-7887	CTY05_01428
CTY05_01429	PWY-6823	molybdenum cofactor biosynthesis
CTY05_01430	PWY-6823	molybdenum cofactor biosynthesis
CTY05_01439	PWY-5392	reductive TCA cycle II
CTY05_01439	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTY05_01439	PWY-5690	TCA cycle II (plants and fungi)
CTY05_01439	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_01439	PWY-6728	methylaspartate cycle
CTY05_01439	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_01439	PWY-7254	TCA cycle VII (acetate-producers)
CTY05_01439	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CTY05_01445	PWY-7560	methylerythritol phosphate pathway II
CTY05_01447	PWY-4981	L-proline biosynthesis II (from arginine)
CTY05_01447	PWY-4984	urea cycle
CTY05_01447	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTY05_01455	PWY-5667	CDP-diacylglycerol biosynthesis I
CTY05_01455	PWY-5981	CDP-diacylglycerol biosynthesis III
CTY05_01455	PWY-7817	CTY05_01455
CTY05_01456	PWY-7560	methylerythritol phosphate pathway II
CTY05_01461	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CTY05_01461	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CTY05_01461	PWY-5989	stearate biosynthesis II (bacteria and plants)
CTY05_01461	PWY-5994	palmitate biosynthesis I (animals and fungi)
CTY05_01461	PWY-6113	superpathway of mycolate biosynthesis
CTY05_01461	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CTY05_01461	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CTY05_01461	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTY05_01461	PWY-7663	gondoate biosynthesis (anaerobic)
CTY05_01461	PWY-7664	oleate biosynthesis IV (anaerobic)
CTY05_01461	PWY-7858	CTY05_01461
CTY05_01461	PWYG-321	mycolate biosynthesis
CTY05_01473	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
CTY05_01473	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
CTY05_01479	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
CTY05_01493	PWY-7799	CTY05_01493
CTY05_01493	PWY-7800	CTY05_01493
CTY05_01507	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
CTY05_01516	PWY-6803	phosphatidylcholine acyl editing
CTY05_01516	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CTY05_01516	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CTY05_01516	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
CTY05_01516	PWY-7783	CTY05_01516
CTY05_01520	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTY05_01520	PWY-5723	Rubisco shunt
CTY05_01523	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_01523	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTY05_01528	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CTY05_01528	PWY-6164	3-dehydroquinate biosynthesis I
CTY05_01528	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CTY05_01537	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CTY05_01537	PWY-7177	UTP and CTP dephosphorylation II
CTY05_01537	PWY-7185	UTP and CTP dephosphorylation I
CTY05_01538	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CTY05_01538	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CTY05_01539	PWY-1042	glycolysis IV (plant cytosol)
CTY05_01539	PWY-1622	formaldehyde assimilation I (serine pathway)
CTY05_01539	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CTY05_01539	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_01539	PWY-5723	Rubisco shunt
CTY05_01539	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_01539	PWY-6886	1-butanol autotrophic biosynthesis
CTY05_01539	PWY-6901	superpathway of glucose and xylose degradation
CTY05_01539	PWY-7003	glycerol degradation to butanol
CTY05_01539	PWY-7124	ethylene biosynthesis V (engineered)
CTY05_01539	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CTY05_01542	PWY-7560	methylerythritol phosphate pathway II
CTY05_01545	PWY-1361	benzoyl-CoA degradation I (aerobic)
CTY05_01545	PWY-2361	3-oxoadipate degradation
CTY05_01545	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CTY05_01546	PWY-6123	inosine-5'-phosphate biosynthesis I
CTY05_01546	PWY-6124	inosine-5'-phosphate biosynthesis II
CTY05_01546	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_01546	PWY-7234	inosine-5'-phosphate biosynthesis III
CTY05_01547	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CTY05_01550	PWY-6041	4-sulfocatechol degradation
CTY05_01551	PWY-6041	4-sulfocatechol degradation
CTY05_01552	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTY05_01552	PWY-6416	quinate degradation II
CTY05_01552	PWY-6707	gallate biosynthesis
CTY05_01569	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CTY05_01579	PWY-5751	phenylethanol biosynthesis
CTY05_01583	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CTY05_01584	PWY-1361	benzoyl-CoA degradation I (aerobic)
CTY05_01584	PWY-2361	3-oxoadipate degradation
CTY05_01584	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CTY05_01588	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CTY05_01593	PWY-5101	L-isoleucine biosynthesis II
CTY05_01593	PWY-5103	L-isoleucine biosynthesis III
CTY05_01593	PWY-5104	L-isoleucine biosynthesis IV
CTY05_01593	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CTY05_01597	PWY-5451	acetone degradation I (to methylglyoxal)
CTY05_01597	PWY-6588	pyruvate fermentation to acetone
CTY05_01597	PWY-6876	isopropanol biosynthesis
CTY05_01597	PWY-7466	acetone degradation III (to propane-1,2-diol)
CTY05_01610	PWY-5451	acetone degradation I (to methylglyoxal)
CTY05_01610	PWY-6588	pyruvate fermentation to acetone
CTY05_01610	PWY-6876	isopropanol biosynthesis
CTY05_01610	PWY-7466	acetone degradation III (to propane-1,2-diol)
CTY05_01619	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
CTY05_01645	PWY-5101	L-isoleucine biosynthesis II
CTY05_01645	PWY-5103	L-isoleucine biosynthesis III
CTY05_01645	PWY-5104	L-isoleucine biosynthesis IV
CTY05_01645	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CTY05_01653	PWY-5381	pyridine nucleotide cycling (plants)
CTY05_01655	PWY-2201	folate transformations I
CTY05_01655	PWY-3841	folate transformations II
CTY05_01658	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CTY05_01665	PWY-5381	pyridine nucleotide cycling (plants)
CTY05_01665	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CTY05_01665	PWY-6596	adenosine nucleotides degradation I
CTY05_01665	PWY-6606	guanosine nucleotides degradation II
CTY05_01665	PWY-6607	guanosine nucleotides degradation I
CTY05_01665	PWY-6608	guanosine nucleotides degradation III
CTY05_01665	PWY-7185	UTP and CTP dephosphorylation I
CTY05_01665	PWY-7821	CTY05_01665
CTY05_01698	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CTY05_01698	PWY-3162	L-tryptophan degradation V (side chain pathway)
CTY05_01698	PWY-5057	L-valine degradation II
CTY05_01698	PWY-5076	L-leucine degradation III
CTY05_01698	PWY-5078	L-isoleucine degradation II
CTY05_01698	PWY-5079	L-phenylalanine degradation III
CTY05_01698	PWY-5082	L-methionine degradation III
CTY05_01698	PWY-5480	pyruvate fermentation to ethanol I
CTY05_01698	PWY-5486	pyruvate fermentation to ethanol II
CTY05_01698	PWY-5751	phenylethanol biosynthesis
CTY05_01698	PWY-6313	serotonin degradation
CTY05_01698	PWY-6333	acetaldehyde biosynthesis I
CTY05_01698	PWY-6342	noradrenaline and adrenaline degradation
CTY05_01698	PWY-6587	pyruvate fermentation to ethanol III
CTY05_01698	PWY-6802	salidroside biosynthesis
CTY05_01698	PWY-6871	3-methylbutanol biosynthesis
CTY05_01698	PWY-7013	L-1,2-propanediol degradation
CTY05_01698	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CTY05_01698	PWY-7118	chitin degradation to ethanol
CTY05_01698	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CTY05_01698	PWY-7798	CTY05_01698
CTY05_01707	PWY-7533	gliotoxin biosynthesis
CTY05_01708	PWY-6823	molybdenum cofactor biosynthesis
CTY05_01710	PWY-6420	pyrroloquinoline quinone biosynthesis
CTY05_01716	PWY-5901	2,3-dihydroxybenzoate biosynthesis
CTY05_01721	PWY-2421	indole-3-acetate degradation VIII (bacterial)
CTY05_01721	PWY-5648	2-nitrobenzoate degradation II
CTY05_01721	PWY-6079	anthranilate degradation I (aerobic)
CTY05_01722	PWY-2421	indole-3-acetate degradation VIII (bacterial)
CTY05_01722	PWY-5648	2-nitrobenzoate degradation II
CTY05_01722	PWY-6079	anthranilate degradation I (aerobic)
CTY05_01744	PWY-5392	reductive TCA cycle II
CTY05_01744	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTY05_01744	PWY-5690	TCA cycle II (plants and fungi)
CTY05_01744	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_01744	PWY-6728	methylaspartate cycle
CTY05_01744	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_01744	PWY-7254	TCA cycle VII (acetate-producers)
CTY05_01744	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CTY05_01767	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CTY05_01768	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CTY05_01768	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CTY05_01772	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CTY05_01772	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CTY05_01776	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTY05_01796	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CTY05_01809	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CTY05_01809	PWY-6164	3-dehydroquinate biosynthesis I
CTY05_01809	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CTY05_01810	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CTY05_01810	PWY-6269	adenosylcobalamin salvage from cobinamide II
CTY05_01810	PWY-7961	CTY05_01810
CTY05_01810	PWY-7963	CTY05_01810
CTY05_01810	PWY-7964	CTY05_01810
CTY05_01810	PWY-7965	CTY05_01810
CTY05_01810	PWY-7966	CTY05_01810
CTY05_01810	PWY-7967	CTY05_01810
CTY05_01810	PWY-7968	CTY05_01810
CTY05_01810	PWY-7969	CTY05_01810
CTY05_01810	PWY-7970	CTY05_01810
CTY05_01810	PWY-7975	CTY05_01810
CTY05_01813	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CTY05_01813	PWY-6269	adenosylcobalamin salvage from cobinamide II
CTY05_01813	PWY-7964	CTY05_01813
CTY05_01813	PWY-7965	CTY05_01813
CTY05_01813	PWY-7966	CTY05_01813
CTY05_01813	PWY-7967	CTY05_01813
CTY05_01813	PWY-7968	CTY05_01813
CTY05_01813	PWY-7969	CTY05_01813
CTY05_01813	PWY-7970	CTY05_01813
CTY05_01814	PWY-6269	adenosylcobalamin salvage from cobinamide II
CTY05_01814	PWY-7962	CTY05_01814
CTY05_01814	PWY-7971	CTY05_01814
CTY05_01814	PWY-7972	CTY05_01814
CTY05_01841	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CTY05_01872	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_01872	PWY-7118	chitin degradation to ethanol
CTY05_01872	PWY-7294	xylose degradation IV
CTY05_01872	PWY-7295	L-arabinose degradation IV
CTY05_01872	PWY-7854	CTY05_01872
CTY05_01877	PWY-5686	UMP biosynthesis
CTY05_01877	PWY-7790	CTY05_01877
CTY05_01877	PWY-7791	CTY05_01877
CTY05_01881	PWY-7205	CMP phosphorylation
CTY05_01895	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CTY05_01907	PWY-1042	glycolysis IV (plant cytosol)
CTY05_01907	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTY05_01907	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_01907	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_01907	PWY-7385	1,3-propanediol biosynthesis (engineered)
CTY05_01909	PWY-1042	glycolysis IV (plant cytosol)
CTY05_01909	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_01909	PWY-6886	1-butanol autotrophic biosynthesis
CTY05_01909	PWY-6901	superpathway of glucose and xylose degradation
CTY05_01909	PWY-7003	glycerol degradation to butanol
CTY05_01925	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
CTY05_01925	PWY-6853	ethylene biosynthesis II (microbes)
CTY05_01925	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CTY05_01933	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTY05_01933	PWY-5723	Rubisco shunt
CTY05_01933	PWY-6891	thiazole biosynthesis II (Bacillus)
CTY05_01933	PWY-6892	thiazole biosynthesis I (E. coli)
CTY05_01933	PWY-6901	superpathway of glucose and xylose degradation
CTY05_01933	PWY-7560	methylerythritol phosphate pathway II
CTY05_01934	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CTY05_01934	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
CTY05_01942	PWY-6938	NADH repair
CTY05_01943	PWY-6700	queuosine biosynthesis
CTY05_01944	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CTY05_01999	PWY-6936	seleno-amino acid biosynthesis
CTY05_01999	PWY-7274	D-cycloserine biosynthesis
CTY05_01999	PWY-7870	CTY05_01999
CTY05_02008	PWY-4202	arsenate detoxification I (glutaredoxin)
CTY05_02008	PWY-4621	arsenate detoxification II (glutaredoxin)
CTY05_02015	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_02015	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_02032	PWY-4381	fatty acid biosynthesis initiation I
CTY05_02032	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CTY05_02032	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTY05_02033	PWY-5796	malonate decarboxylase activation
CTY05_02034	PWY-6060	malonate degradation II (biotin-dependent)
CTY05_02035	PWY-4381	fatty acid biosynthesis initiation I
CTY05_02035	PWY-5743	3-hydroxypropanoate cycle
CTY05_02035	PWY-5744	glyoxylate assimilation
CTY05_02035	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_02035	PWY-6060	malonate degradation II (biotin-dependent)
CTY05_02035	PWY-6722	candicidin biosynthesis
CTY05_02037	PWY-5796	malonate decarboxylase activation
CTY05_02038	PWY-5794	malonate degradation I (biotin-independent)
CTY05_02038	PWY-6060	malonate degradation II (biotin-dependent)
CTY05_02046	PWY-4061	glutathione-mediated detoxification I
CTY05_02046	PWY-6842	glutathione-mediated detoxification II
CTY05_02046	PWY-7112	4-hydroxy-2-nonenal detoxification
CTY05_02046	PWY-7533	gliotoxin biosynthesis
CTY05_02051	PWY-6936	seleno-amino acid biosynthesis
CTY05_02051	PWY-7274	D-cycloserine biosynthesis
CTY05_02051	PWY-7870	CTY05_02051
CTY05_02053	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CTY05_02089	PWY-4381	fatty acid biosynthesis initiation I
CTY05_02089	PWY-5743	3-hydroxypropanoate cycle
CTY05_02089	PWY-5744	glyoxylate assimilation
CTY05_02089	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_02089	PWY-6722	candicidin biosynthesis
CTY05_02106	PWY-1361	benzoyl-CoA degradation I (aerobic)
CTY05_02106	PWY-5109	2-methylbutanoate biosynthesis
CTY05_02106	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CTY05_02106	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CTY05_02106	PWY-5177	glutaryl-CoA degradation
CTY05_02106	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_02106	PWY-6435	4-hydroxybenzoate biosynthesis V
CTY05_02106	PWY-6583	pyruvate fermentation to butanol I
CTY05_02106	PWY-6863	pyruvate fermentation to hexanol
CTY05_02106	PWY-6883	pyruvate fermentation to butanol II
CTY05_02106	PWY-6944	androstenedione degradation
CTY05_02106	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CTY05_02106	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CTY05_02106	PWY-7007	methyl ketone biosynthesis
CTY05_02106	PWY-7046	4-coumarate degradation (anaerobic)
CTY05_02106	PWY-7094	fatty acid salvage
CTY05_02106	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CTY05_02106	PWY-735	jasmonic acid biosynthesis
CTY05_02106	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CTY05_02106	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CTY05_02106	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CTY05_02106	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CTY05_02106	PWY-7726	CTY05_02106
CTY05_02106	PWY-7778	CTY05_02106
CTY05_02106	PWY-7779	CTY05_02106
CTY05_02110	PWY-723	alkylnitronates degradation
CTY05_02117	PWY-6832	2-aminoethylphosphonate degradation II
CTY05_02159	PWY-1341	phenylacetate degradation II (anaerobic)
CTY05_02159	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
CTY05_02159	PWY-7716	CTY05_02159
CTY05_02160	PWY-1361	benzoyl-CoA degradation I (aerobic)
CTY05_02160	PWY-2361	3-oxoadipate degradation
CTY05_02160	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CTY05_02161	PWY-1361	benzoyl-CoA degradation I (aerobic)
CTY05_02161	PWY-5109	2-methylbutanoate biosynthesis
CTY05_02161	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CTY05_02161	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CTY05_02161	PWY-5177	glutaryl-CoA degradation
CTY05_02161	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_02161	PWY-6435	4-hydroxybenzoate biosynthesis V
CTY05_02161	PWY-6583	pyruvate fermentation to butanol I
CTY05_02161	PWY-6863	pyruvate fermentation to hexanol
CTY05_02161	PWY-6883	pyruvate fermentation to butanol II
CTY05_02161	PWY-6944	androstenedione degradation
CTY05_02161	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CTY05_02161	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CTY05_02161	PWY-7007	methyl ketone biosynthesis
CTY05_02161	PWY-7046	4-coumarate degradation (anaerobic)
CTY05_02161	PWY-7094	fatty acid salvage
CTY05_02161	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CTY05_02161	PWY-735	jasmonic acid biosynthesis
CTY05_02161	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CTY05_02161	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CTY05_02161	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CTY05_02161	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CTY05_02161	PWY-7726	CTY05_02161
CTY05_02161	PWY-7778	CTY05_02161
CTY05_02161	PWY-7779	CTY05_02161
CTY05_02186	PWY-6700	queuosine biosynthesis
CTY05_02215	PWY-5169	cyanurate degradation
CTY05_02215	PWY-5703	urea degradation I
CTY05_02215	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CTY05_02220	PWY-5169	cyanurate degradation
CTY05_02220	PWY-5703	urea degradation I
CTY05_02234	PWY-4041	&gamma;-glutamyl cycle
CTY05_02234	PWY-7942	CTY05_02234
CTY05_02248	PWY-1361	benzoyl-CoA degradation I (aerobic)
CTY05_02248	PWY-5109	2-methylbutanoate biosynthesis
CTY05_02248	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CTY05_02248	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CTY05_02248	PWY-5177	glutaryl-CoA degradation
CTY05_02248	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_02248	PWY-6435	4-hydroxybenzoate biosynthesis V
CTY05_02248	PWY-6583	pyruvate fermentation to butanol I
CTY05_02248	PWY-6863	pyruvate fermentation to hexanol
CTY05_02248	PWY-6883	pyruvate fermentation to butanol II
CTY05_02248	PWY-6944	androstenedione degradation
CTY05_02248	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CTY05_02248	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CTY05_02248	PWY-7007	methyl ketone biosynthesis
CTY05_02248	PWY-7046	4-coumarate degradation (anaerobic)
CTY05_02248	PWY-7094	fatty acid salvage
CTY05_02248	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CTY05_02248	PWY-735	jasmonic acid biosynthesis
CTY05_02248	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CTY05_02248	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CTY05_02248	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CTY05_02248	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CTY05_02248	PWY-7726	CTY05_02248
CTY05_02248	PWY-7778	CTY05_02248
CTY05_02248	PWY-7779	CTY05_02248
CTY05_02262	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTY05_02273	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CTY05_02273	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CTY05_02313	PWY-3341	L-proline biosynthesis III
CTY05_02313	PWY-4981	L-proline biosynthesis II (from arginine)
CTY05_02313	PWY-6344	L-ornithine degradation II (Stickland reaction)
CTY05_02328	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CTY05_02340	PWY-4381	fatty acid biosynthesis initiation I
CTY05_02355	PWY-5686	UMP biosynthesis
CTY05_02355	PWY-7790	CTY05_02355
CTY05_02355	PWY-7791	CTY05_02355
CTY05_02368	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_02370	PWY-1042	glycolysis IV (plant cytosol)
CTY05_02370	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_02370	PWY-6901	superpathway of glucose and xylose degradation
CTY05_02370	PWY-7003	glycerol degradation to butanol
CTY05_02372	PWY-2941	L-lysine biosynthesis II
CTY05_02372	PWY-2942	L-lysine biosynthesis III
CTY05_02372	PWY-5097	L-lysine biosynthesis VI
CTY05_02372	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
CTY05_02372	PWY-6559	spermidine biosynthesis II
CTY05_02372	PWY-6562	norspermidine biosynthesis
CTY05_02372	PWY-7153	grixazone biosynthesis
CTY05_02372	PWY-7977	CTY05_02372
CTY05_02377	PWY-6610	adenine and adenosine salvage IV
CTY05_02408	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
CTY05_02411	PWY-6486	D-galacturonate degradation II
CTY05_02411	PWY-6497	D-galactarate degradation II
CTY05_02411	PWY-6499	D-glucarate degradation II
CTY05_02411	PWY-6501	D-glucuronate degradation II
CTY05_02412	PWY-6499	D-glucarate degradation II
CTY05_02414	PWY-6497	D-galactarate degradation II
CTY05_02446	PWY-4983	L-citrulline-nitric oxide cycle
CTY05_02446	PWY-4984	urea cycle
CTY05_02446	PWY-5	canavanine biosynthesis
CTY05_02446	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_02446	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTY05_02448	PWY-5686	UMP biosynthesis
CTY05_02448	PWY-7790	CTY05_02448
CTY05_02448	PWY-7791	CTY05_02448
CTY05_02466	PWY-5381	pyridine nucleotide cycling (plants)
CTY05_02466	PWY-7761	CTY05_02466
CTY05_02564	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_02567	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTY05_02567	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTY05_02573	PWY-5704	urea degradation II
CTY05_02574	PWY-5704	urea degradation II
CTY05_02575	PWY-5704	urea degradation II
CTY05_02579	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_02585	PWY-5278	sulfite oxidation III
CTY05_02585	PWY-5340	sulfate activation for sulfonation
CTY05_02585	PWY-6683	sulfate reduction III (assimilatory)
CTY05_02585	PWY-6932	selenate reduction
CTY05_02586	PWY-5278	sulfite oxidation III
CTY05_02586	PWY-5340	sulfate activation for sulfonation
CTY05_02586	PWY-6683	sulfate reduction III (assimilatory)
CTY05_02586	PWY-6932	selenate reduction
CTY05_02598	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTY05_02598	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CTY05_02598	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTY05_02598	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTY05_02603	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CTY05_02603	PWY-5743	3-hydroxypropanoate cycle
CTY05_02603	PWY-5744	glyoxylate assimilation
CTY05_02603	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_02603	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_02603	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CTY05_02603	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CTY05_02615	PWY-2201	folate transformations I
CTY05_02615	PWY-3841	folate transformations II
CTY05_02615	PWY-7977	CTY05_02615
CTY05_02617	PWY-6891	thiazole biosynthesis II (Bacillus)
CTY05_02617	PWY-6892	thiazole biosynthesis I (E. coli)
CTY05_02617	PWY-7560	methylerythritol phosphate pathway II
CTY05_02622	PWY-6317	galactose degradation I (Leloir pathway)
CTY05_02660	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
CTY05_02660	PWY-7494	choline degradation IV
CTY05_02661	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
CTY05_02661	PWY-7494	choline degradation IV
CTY05_02662	PWY-7254	TCA cycle VII (acetate-producers)
CTY05_02677	PWY-6703	preQ<sub>0</sub> biosynthesis
CTY05_02682	PWY-4041	&gamma;-glutamyl cycle
CTY05_02682	PWY-4061	glutathione-mediated detoxification I
CTY05_02682	PWY-5826	hypoglycin biosynthesis
CTY05_02682	PWY-6842	glutathione-mediated detoxification II
CTY05_02682	PWY-7112	4-hydroxy-2-nonenal detoxification
CTY05_02682	PWY-7559	glutathione degradation (DUG pathway - yeast)
CTY05_02686	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTY05_02686	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CTY05_02694	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTY05_02704	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_02704	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTY05_02705	PWY-6749	CMP-legionaminate biosynthesis I
CTY05_02718	PWY-7801	CTY05_02718
CTY05_02719	PWY-7802	CTY05_02719
CTY05_02721	PWY-6855	chitin degradation I (archaea)
CTY05_02721	PWY-6902	chitin degradation II
CTY05_02721	PWY-7822	CTY05_02721
CTY05_02732	PWY-5381	pyridine nucleotide cycling (plants)
CTY05_02732	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CTY05_02732	PWY-7761	CTY05_02732
CTY05_02745	PWY-7851	CTY05_02745
CTY05_02752	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTY05_02761	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
CTY05_02762	PWY-5155	&beta;-alanine biosynthesis III
CTY05_02765	PWY-6167	flavin biosynthesis II (archaea)
CTY05_02765	PWY-6168	flavin biosynthesis III (fungi)
CTY05_02770	PWY-5367	petroselinate biosynthesis
CTY05_02770	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CTY05_02770	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CTY05_02770	PWY-5989	stearate biosynthesis II (bacteria and plants)
CTY05_02770	PWY-5994	palmitate biosynthesis I (animals and fungi)
CTY05_02770	PWY-6113	superpathway of mycolate biosynthesis
CTY05_02770	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CTY05_02770	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CTY05_02770	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTY05_02770	PWY-7663	gondoate biosynthesis (anaerobic)
CTY05_02770	PWY-7664	oleate biosynthesis IV (anaerobic)
CTY05_02770	PWY-7858	CTY05_02770
CTY05_02770	PWYG-321	mycolate biosynthesis
CTY05_02771	PWY-4381	fatty acid biosynthesis initiation I
CTY05_02771	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CTY05_02771	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTY05_02779	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CTY05_02780	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CTY05_02793	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CTY05_02793	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CTY05_02794	PWY-3961	phosphopantothenate biosynthesis II
CTY05_02825	PWY-7183	pyrimidine nucleobases salvage I
CTY05_02843	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTY05_02843	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTY05_02843	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTY05_02843	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTY05_02843	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_02843	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_02843	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTY05_02843	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CTY05_02845	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTY05_02845	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTY05_02845	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTY05_02845	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTY05_02845	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_02845	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_02845	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTY05_02845	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CTY05_02855	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CTY05_02855	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CTY05_02855	PWY-6936	seleno-amino acid biosynthesis
CTY05_02855	PWY-702	L-methionine biosynthesis II
CTY05_02874	PWY-6609	adenine and adenosine salvage III
CTY05_02874	PWY-6611	adenine and adenosine salvage V
CTY05_02874	PWY-7179	purine deoxyribonucleosides degradation I
CTY05_02874	PWY-7179-1	purine deoxyribonucleosides degradation
CTY05_02879	PWY-5316	nicotine biosynthesis
CTY05_02879	PWY-7342	superpathway of nicotine biosynthesis
CTY05_02880	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_02888	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTY05_02888	PWY-5723	Rubisco shunt
CTY05_02890	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CTY05_02903	PWY-5958	acridone alkaloid biosynthesis
CTY05_02903	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CTY05_02903	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CTY05_02907	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_02907	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_02907	PWY-7953	CTY05_02907
CTY05_02926	PWY-3341	L-proline biosynthesis III
CTY05_02926	PWY-4981	L-proline biosynthesis II (from arginine)
CTY05_02926	PWY-6344	L-ornithine degradation II (Stickland reaction)
CTY05_02928	PWY-4381	fatty acid biosynthesis initiation I
CTY05_02928	PWY-5743	3-hydroxypropanoate cycle
CTY05_02928	PWY-5744	glyoxylate assimilation
CTY05_02928	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_02928	PWY-6722	candicidin biosynthesis
CTY05_02931	PWY-7980	CTY05_02931
CTY05_02950	PWY-6654	phosphopantothenate biosynthesis III
CTY05_02951	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CTY05_02951	PWY-6148	tetrahydromethanopterin biosynthesis
CTY05_02951	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CTY05_02951	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CTY05_02951	PWY-7852	CTY05_02951
CTY05_02951	PWY-7853	CTY05_02951
CTY05_02959	PWY-6936	seleno-amino acid biosynthesis
CTY05_02985	PWY-5103	L-isoleucine biosynthesis III
CTY05_02985	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CTY05_02986	PWY-5101	L-isoleucine biosynthesis II
CTY05_02986	PWY-5103	L-isoleucine biosynthesis III
CTY05_02986	PWY-5104	L-isoleucine biosynthesis IV
CTY05_02986	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CTY05_02986	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CTY05_02986	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CTY05_02986	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CTY05_02987	PWY-5101	L-isoleucine biosynthesis II
CTY05_02987	PWY-5103	L-isoleucine biosynthesis III
CTY05_02987	PWY-5104	L-isoleucine biosynthesis IV
CTY05_02987	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CTY05_02987	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CTY05_02987	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CTY05_02987	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CTY05_02995	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CTY05_02995	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CTY05_02995	PWY-5989	stearate biosynthesis II (bacteria and plants)
CTY05_02995	PWY-6113	superpathway of mycolate biosynthesis
CTY05_02995	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CTY05_02995	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CTY05_02995	PWY-7663	gondoate biosynthesis (anaerobic)
CTY05_02995	PWY-7664	oleate biosynthesis IV (anaerobic)
CTY05_02995	PWY-7858	CTY05_02995
CTY05_02995	PWYG-321	mycolate biosynthesis
CTY05_03002	PWY-6012	acyl carrier protein metabolism I
CTY05_03002	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CTY05_03002	PWY-6289	petrobactin biosynthesis
CTY05_03011	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTY05_03011	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CTY05_03011	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTY05_03011	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_03011	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CTY05_03011	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTY05_03011	PWY-7205	CMP phosphorylation
CTY05_03011	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTY05_03011	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_03011	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_03011	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_03011	PWY-7224	purine deoxyribonucleosides salvage
CTY05_03011	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTY05_03011	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CTY05_03016	PWY-6902	chitin degradation II
CTY05_03016	PWY-7822	CTY05_03016
CTY05_03016	PWY-7883	CTY05_03016
CTY05_03019	PWY-3341	L-proline biosynthesis III
CTY05_03019	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CTY05_03021	PWY-5530	sorbitol biosynthesis II
CTY05_03021	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTY05_03023	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CTY05_03023	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
CTY05_03023	PWY-7242	D-fructuronate degradation
CTY05_03023	PWY-7310	D-glucosaminate degradation
CTY05_03023	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
CTY05_03024	PWY-5101	L-isoleucine biosynthesis II
CTY05_03024	PWY-5103	L-isoleucine biosynthesis III
CTY05_03024	PWY-5104	L-isoleucine biosynthesis IV
CTY05_03024	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CTY05_03025	PWY-5482	pyruvate fermentation to acetate II
CTY05_03025	PWY-5485	pyruvate fermentation to acetate IV
CTY05_03025	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_03026	PWY-1281	sulfoacetaldehyde degradation I
CTY05_03026	PWY-5482	pyruvate fermentation to acetate II
CTY05_03026	PWY-5485	pyruvate fermentation to acetate IV
CTY05_03026	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_03026	PWY-6637	sulfolactate degradation II
CTY05_03027	PWY-5392	reductive TCA cycle II
CTY05_03027	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTY05_03027	PWY-5690	TCA cycle II (plants and fungi)
CTY05_03027	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_03027	PWY-6728	methylaspartate cycle
CTY05_03027	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTY05_03027	PWY-7254	TCA cycle VII (acetate-producers)
CTY05_03027	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CTY05_03035	PWY-6871	3-methylbutanol biosynthesis
CTY05_03037	PWY-5344	L-homocysteine biosynthesis
CTY05_03050	PWY-3841	folate transformations II
CTY05_03050	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTY05_03050	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTY05_03050	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTY05_03050	PWY-7199	pyrimidine deoxyribonucleosides salvage
CTY05_03050	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTY05_03051	PWY-3841	folate transformations II
CTY05_03051	PWY-6614	tetrahydrofolate biosynthesis
CTY05_03057	PWY-2201	folate transformations I
CTY05_03057	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_03057	PWY-7909	CTY05_03057
CTY05_03081	PWY-2941	L-lysine biosynthesis II
CTY05_03081	PWY-2942	L-lysine biosynthesis III
CTY05_03081	PWY-5097	L-lysine biosynthesis VI
CTY05_03081	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_03081	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
CTY05_03081	PWY-6559	spermidine biosynthesis II
CTY05_03081	PWY-6562	norspermidine biosynthesis
CTY05_03081	PWY-7153	grixazone biosynthesis
CTY05_03081	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTY05_03081	PWY-7977	CTY05_03081
CTY05_03090	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CTY05_03099	PWY-5506	methanol oxidation to formaldehyde IV
CTY05_03122	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CTY05_03129	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_03129	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_03156	PWY-5839	menaquinol-7 biosynthesis
CTY05_03156	PWY-5844	menaquinol-9 biosynthesis
CTY05_03156	PWY-5849	menaquinol-6 biosynthesis
CTY05_03156	PWY-5890	menaquinol-10 biosynthesis
CTY05_03156	PWY-5891	menaquinol-11 biosynthesis
CTY05_03156	PWY-5892	menaquinol-12 biosynthesis
CTY05_03156	PWY-5895	menaquinol-13 biosynthesis
CTY05_03178	PWY-1042	glycolysis IV (plant cytosol)
CTY05_03178	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_03178	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_03178	PWY-7003	glycerol degradation to butanol
CTY05_03182	PWY-7851	CTY05_03182
CTY05_03185	PWY-5532	adenosine nucleotides degradation IV
CTY05_03185	PWY-7181	pyrimidine deoxyribonucleosides degradation
CTY05_03196	PWY-5269	cardiolipin biosynthesis II
CTY05_03196	PWY-5668	cardiolipin biosynthesis I
CTY05_03196	PWY-7817	CTY05_03196
CTY05_03202	PWY-1361	benzoyl-CoA degradation I (aerobic)
CTY05_03202	PWY-5109	2-methylbutanoate biosynthesis
CTY05_03202	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CTY05_03202	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
CTY05_03202	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CTY05_03202	PWY-5177	glutaryl-CoA degradation
CTY05_03202	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTY05_03202	PWY-6435	4-hydroxybenzoate biosynthesis V
CTY05_03202	PWY-6583	pyruvate fermentation to butanol I
CTY05_03202	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
CTY05_03202	PWY-6863	pyruvate fermentation to hexanol
CTY05_03202	PWY-6883	pyruvate fermentation to butanol II
CTY05_03202	PWY-6944	androstenedione degradation
CTY05_03202	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CTY05_03202	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CTY05_03202	PWY-7007	methyl ketone biosynthesis
CTY05_03202	PWY-7046	4-coumarate degradation (anaerobic)
CTY05_03202	PWY-7094	fatty acid salvage
CTY05_03202	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CTY05_03202	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
CTY05_03202	PWY-7292	oleate &beta;-oxidation (thioesterase-dependent, yeast)
CTY05_03202	PWY-7307	oleate &beta;-oxidation (reductase-dependent, yeast)
CTY05_03202	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
CTY05_03202	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
CTY05_03202	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
CTY05_03202	PWY-735	jasmonic acid biosynthesis
CTY05_03202	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CTY05_03202	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CTY05_03202	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CTY05_03202	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CTY05_03202	PWY-7726	CTY05_03202
CTY05_03202	PWY-7778	CTY05_03202
CTY05_03202	PWY-7779	CTY05_03202
CTY05_03203	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CTY05_03203	PWY-6435	4-hydroxybenzoate biosynthesis V
CTY05_03203	PWY-6863	pyruvate fermentation to hexanol
CTY05_03203	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CTY05_03203	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CTY05_03203	PWY-6948	sitosterol degradation to androstenedione
CTY05_03203	PWY-7094	fatty acid salvage
CTY05_03203	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
CTY05_03203	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
CTY05_03203	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
CTY05_03203	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
CTY05_03203	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
CTY05_03203	PWY-735	jasmonic acid biosynthesis
CTY05_03203	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CTY05_03203	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CTY05_03203	PWY-7726	CTY05_03203
CTY05_03233	PWY-5958	acridone alkaloid biosynthesis
CTY05_03233	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CTY05_03233	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CTY05_03234	PWY-181	photorespiration
CTY05_03243	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTY05_03243	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CTY05_03244	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTY05_03244	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CTY05_03247	PWY-4983	L-citrulline-nitric oxide cycle
CTY05_03247	PWY-4984	urea cycle
CTY05_03247	PWY-5	canavanine biosynthesis
CTY05_03247	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_03247	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTY05_03254	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
CTY05_03259	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTY05_03259	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CTY05_03259	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTY05_03259	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTY05_03260	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTY05_03260	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTY05_03273	PWY-1042	glycolysis IV (plant cytosol)
CTY05_03273	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CTY05_03273	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTY05_03273	PWY-5723	Rubisco shunt
CTY05_03273	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_03273	PWY-6886	1-butanol autotrophic biosynthesis
CTY05_03273	PWY-6901	superpathway of glucose and xylose degradation
CTY05_03273	PWY-7003	glycerol degradation to butanol
CTY05_03273	PWY-7124	ethylene biosynthesis V (engineered)
CTY05_03273	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CTY05_03280	PWY-6167	flavin biosynthesis II (archaea)
CTY05_03280	PWY-6168	flavin biosynthesis III (fungi)
CTY05_03280	PWY-7980	CTY05_03280
CTY05_03282	PWY-7991	CTY05_03282
CTY05_03293	PWY-7805	CTY05_03293
CTY05_03293	PWY-7807	CTY05_03293
CTY05_03314	PWY-6936	seleno-amino acid biosynthesis
CTY05_03334	PWY-7980	CTY05_03334
CTY05_03336	PWY-7980	CTY05_03336
CTY05_03348	PWY-6339	syringate degradation
CTY05_03357	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CTY05_03368	PWY-6012	acyl carrier protein metabolism I
CTY05_03368	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CTY05_03368	PWY-6289	petrobactin biosynthesis
CTY05_03378	PWY-6157	autoinducer AI-1 biosynthesis
CTY05_03385	PWY-5642	2,4-dinitrotoluene degradation
CTY05_03390	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTY05_03407	PWY-5747	2-methylcitrate cycle II
CTY05_03409	PWY-5913	TCA cycle VI (obligate autotrophs)
CTY05_03409	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
CTY05_03409	PWY-6638	sulfolactate degradation III
CTY05_03409	PWY-6642	(<i>R</i>)-cysteate degradation
CTY05_03409	PWY-6643	coenzyme M biosynthesis II
CTY05_03409	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CTY05_03409	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CTY05_03409	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTY05_03410	PWY-5386	methylglyoxal degradation I
CTY05_03410	PWY-7425	2-chloroacrylate degradation I
CTY05_03414	PWY-6749	CMP-legionaminate biosynthesis I
CTY05_03415	PWY-3801	sucrose degradation II (sucrose synthase)
CTY05_03415	PWY-5054	sorbitol biosynthesis I
CTY05_03415	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CTY05_03415	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CTY05_03415	PWY-5659	GDP-mannose biosynthesis
CTY05_03415	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTY05_03415	PWY-621	sucrose degradation III (sucrose invertase)
CTY05_03415	PWY-622	starch biosynthesis
CTY05_03415	PWY-6981	chitin biosynthesis
CTY05_03415	PWY-6992	1,5-anhydrofructose degradation
CTY05_03415	PWY-7238	sucrose biosynthesis II
CTY05_03415	PWY-7347	sucrose biosynthesis III
CTY05_03415	PWY-7385	1,3-propanediol biosynthesis (engineered)
CTY05_03416	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
CTY05_03416	PWY-7820	CTY05_03416
CTY05_03417	PWY-3801	sucrose degradation II (sucrose synthase)
CTY05_03417	PWY-6527	stachyose degradation
CTY05_03417	PWY-7238	sucrose biosynthesis II
CTY05_03417	PWY-7343	UDP-glucose biosynthesis
CTY05_03417	PWY-7817	CTY05_03417
CTY05_03436	PWY-5316	nicotine biosynthesis
CTY05_03436	PWY-5381	pyridine nucleotide cycling (plants)
CTY05_03436	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CTY05_03436	PWY-7342	superpathway of nicotine biosynthesis
CTY05_03438	PWY-7782	CTY05_03438
CTY05_03438	PWY-7783	CTY05_03438
CTY05_03445	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
CTY05_03445	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
CTY05_03445	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
CTY05_03445	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
CTY05_03445	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
CTY05_03445	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
CTY05_03445	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
CTY05_03445	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
CTY05_03445	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
CTY05_03445	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
CTY05_03450	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTY05_03459	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CTY05_03459	PWY-6167	flavin biosynthesis II (archaea)
CTY05_03459	PWY-6168	flavin biosynthesis III (fungi)
CTY05_03459	PWY-7863	CTY05_03459
CTY05_03461	PWY-7884	CTY05_03461
CTY05_03481	PWY-6123	inosine-5'-phosphate biosynthesis I
CTY05_03481	PWY-7234	inosine-5'-phosphate biosynthesis III
CTY05_03483	PWY-7883	CTY05_03483
CTY05_03490	PWY-5497	purine nucleobases degradation II (anaerobic)
CTY05_03490	PWY-6606	guanosine nucleotides degradation II
CTY05_03490	PWY-6608	guanosine nucleotides degradation III
CTY05_03490	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CTY05_03492	PWY-6599	guanine and guanosine salvage II
CTY05_03492	PWY-6609	adenine and adenosine salvage III
CTY05_03492	PWY-6610	adenine and adenosine salvage IV
CTY05_03492	PWY-6620	guanine and guanosine salvage
