CTY05_00001 SM00382 ATPases associated with a variety of cellular activities CTY05_00001 SM00760 Bacterial dnaA protein helix-turn-helix domain CTY05_00002 SM00480 DNA polymerase III beta subunit CTY05_00004 SM00387 Histidine kinase-like ATPases CTY05_00004 SM00433 TopoisomeraseII CTY05_00007 SM00382 ATPases associated with a variety of cellular activities CTY05_00033 SM00271 DnaJ molecular chaperone homology domain CTY05_00041 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_00042 SM00829 Enoylreductase CTY05_00046 SM00478 endonuclease III CTY05_00046 SM00525 CTY05_00046 CTY05_00052 SM00382 ATPases associated with a variety of cellular activities CTY05_00057 SM01130 CTY05_00057 CTY05_00063 SM00346 helix_turn_helix isocitrate lyase regulation CTY05_00069 SM00833 Cobalamin synthesis protein cobW C-terminal domain CTY05_00071 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_00071 SM00866 CTY05_00071 CTY05_00083 SM00387 Histidine kinase-like ATPases CTY05_00098 SM00450 Rhodanese Homology Domain CTY05_00101 SM00387 Histidine kinase-like ATPases CTY05_00101 SM00388 His Kinase A (phosphoacceptor) domain CTY05_00102 SM00448 cheY-homologous receiver domain CTY05_00102 SM00862 Transcriptional regulatory protein, C terminal CTY05_00113 SM00257 Lysin motif CTY05_00120 SM00387 Histidine kinase-like ATPases CTY05_00120 SM00433 TopoisomeraseII CTY05_00133 SM00267 diguanylate cyclase CTY05_00146 SM00842 Cell division protein FtsA CTY05_00147 SM00864 Tubulin/FtsZ family, GTPase domain CTY05_00147 SM00865 Tubulin/FtsZ family, C-terminal domain CTY05_00156 SM00849 Metallo-beta-lactamase superfamily CTY05_00158 SM00116 Domain in cystathionine beta-synthase and other proteins. CTY05_00158 SM01240 CTY05_00158 CTY05_00163 SM00937 CTY05_00163 CTY05_00165 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CTY05_00173 SM00344 helix_turn_helix ASNC type CTY05_00176 SM00421 helix_turn_helix, Lux Regulon CTY05_00176 SM00448 cheY-homologous receiver domain CTY05_00178 SM00387 Histidine kinase-like ATPases CTY05_00178 SM00388 His Kinase A (phosphoacceptor) domain CTY05_00178 SM00448 cheY-homologous receiver domain CTY05_00184 SM00267 diguanylate cyclase CTY05_00187 SM00829 Enoylreductase CTY05_00196 SM00530 Helix-turn-helix XRE-family like proteins CTY05_00198 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_00227 SM00487 DEAD-like helicases superfamily CTY05_00237 SM00530 Helix-turn-helix XRE-family like proteins CTY05_00238 SM00530 Helix-turn-helix XRE-family like proteins CTY05_00240 SM00344 helix_turn_helix ASNC type CTY05_00250 SM00342 helix_turn_helix, arabinose operon control protein CTY05_00258 SM00342 helix_turn_helix, arabinose operon control protein CTY05_00263 SM00477 DNA/RNA non-specific endonuclease CTY05_00263 SM00892 DNA/RNA non-specific endonuclease CTY05_00267 SM00342 helix_turn_helix, arabinose operon control protein CTY05_00271 SM00357 Cold shock protein domain CTY05_00274 SM00530 Helix-turn-helix XRE-family like proteins CTY05_00276 SM00474 3'-5' exonuclease CTY05_00285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTY05_00285 SM00387 Histidine kinase-like ATPases CTY05_00285 SM00388 His Kinase A (phosphoacceptor) domain CTY05_00286 SM00448 cheY-homologous receiver domain CTY05_00286 SM00862 Transcriptional regulatory protein, C terminal CTY05_00287 SM00316 Ribosomal protein S1-like RNA-binding domain CTY05_00287 SM00732 Likely ribonuclease with RNase H fold. CTY05_00288 SM00947 Carbonic anhydrase CTY05_00291 SM00382 ATPases associated with a variety of cellular activities CTY05_00319 SM00842 Cell division protein FtsA CTY05_00323 SM00965 Secretin and TonB N terminus short domain CTY05_00338 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CTY05_00338 SM00954 Region found in RelA / SpoT proteins CTY05_00339 SM01409 CTY05_00339 CTY05_00340 SM00072 Guanylate kinase homologues. CTY05_00377 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CTY05_00398 SM00116 Domain in cystathionine beta-synthase and other proteins. CTY05_00406 SM00861 Transketolase, pyrimidine binding domain CTY05_00408 SM00487 DEAD-like helicases superfamily CTY05_00408 SM00490 helicase superfamily c-terminal domain CTY05_00410 SM00382 ATPases associated with a variety of cellular activities CTY05_00419 SM00487 DEAD-like helicases superfamily CTY05_00419 SM00490 helicase superfamily c-terminal domain CTY05_00422 SM00563 Phosphate acyltransferases CTY05_00432 SM01403 CTY05_00432 CTY05_00436 SM01382 CTY05_00436 CTY05_00436 SM01383 CTY05_00436 CTY05_00439 SM00322 K homology RNA-binding domain CTY05_00443 SM01374 CTY05_00443 CTY05_00444 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CTY05_00457 SM00363 S4 RNA-binding domain CTY05_00457 SM01390 CTY05_00457 CTY05_00458 SM00662 RNA polymerases D CTY05_00471 SM00316 Ribosomal protein S1-like RNA-binding domain CTY05_00471 SM00955 CTY05_00471 CTY05_00481 SM00342 helix_turn_helix, arabinose operon control protein CTY05_00491 SM00729 Elongator protein 3, MiaB family, Radical SAM CTY05_00497 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CTY05_00512 SM00878 Biotin carboxylase C-terminal domain CTY05_00519 SM00650 Ribosomal RNA adenine dimethylases CTY05_00525 SM00563 Phosphate acyltransferases CTY05_00526 SM00155 Phospholipase D. Active site motifs. CTY05_00529 SM00267 diguanylate cyclase CTY05_00541 SM00450 Rhodanese Homology Domain CTY05_00546 SM00481 DNA polymerase alpha chain like domain CTY05_00552 SM01323 CTY05_00552 CTY05_00558 SM00387 Histidine kinase-like ATPases CTY05_00558 SM00388 His Kinase A (phosphoacceptor) domain CTY05_00581 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTY05_00581 SM00387 Histidine kinase-like ATPases CTY05_00581 SM00388 His Kinase A (phosphoacceptor) domain CTY05_00582 SM00448 cheY-homologous receiver domain CTY05_00582 SM00862 Transcriptional regulatory protein, C terminal CTY05_00594 SM00342 helix_turn_helix, arabinose operon control protein CTY05_00600 SM00849 Metallo-beta-lactamase superfamily CTY05_00602 SM00957 SecA DEAD-like domain CTY05_00602 SM00958 SecA preprotein cross-linking domain CTY05_00612 SM00342 helix_turn_helix, arabinose operon control protein CTY05_00615 SM00564 beta-propeller repeat CTY05_00628 SM00838 Elongation factor G C-terminus CTY05_00632 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CTY05_00632 SM01232 CTY05_00632 CTY05_00637 SM00671 Sel1-like repeats. CTY05_00648 SM00448 cheY-homologous receiver domain CTY05_00649 SM00448 cheY-homologous receiver domain CTY05_00650 SM00260 Two component signalling adaptor domain CTY05_00651 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CTY05_00652 SM00073 Histidine Phosphotransfer domain CTY05_00652 SM00260 Two component signalling adaptor domain CTY05_00652 SM00387 Histidine kinase-like ATPases CTY05_00652 SM00448 cheY-homologous receiver domain CTY05_00652 SM01231 CTY05_00652 CTY05_00654 SM00729 Elongator protein 3, MiaB family, Radical SAM CTY05_00682 SM00845 GatB domain CTY05_00689 SM00316 Ribosomal protein S1-like RNA-binding domain CTY05_00701 SM00342 helix_turn_helix, arabinose operon control protein CTY05_00702 SM00829 Enoylreductase CTY05_00709 SM00244 prohibitin homologues CTY05_00712 SM00563 Phosphate acyltransferases CTY05_00716 SM00448 cheY-homologous receiver domain CTY05_00716 SM00862 Transcriptional regulatory protein, C terminal CTY05_00717 SM00387 Histidine kinase-like ATPases CTY05_00717 SM00388 His Kinase A (phosphoacceptor) domain CTY05_00726 SM00822 CTY05_00726 CTY05_00733 SM00014 Acid phosphatase homologues CTY05_00753 SM00450 Rhodanese Homology Domain CTY05_00760 SM00861 Transketolase, pyrimidine binding domain CTY05_00764 SM00881 CoA binding domain CTY05_00773 SM00854 Bacterial capsule synthesis protein PGA_cap CTY05_00779 SM00851 MGS-like domain CTY05_00779 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CTY05_00780 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CTY05_00783 SM01103 CTY05_00783 CTY05_00785 SM00382 ATPases associated with a variety of cellular activities CTY05_00800 SM00046 Diacylglycerol kinase catalytic domain (presumed) CTY05_00803 SM00883 Chaperonin 10 Kd subunit CTY05_00806 SM00849 Metallo-beta-lactamase superfamily CTY05_00834 SM00978 CTY05_00834 CTY05_00835 SM00382 ATPases associated with a variety of cellular activities CTY05_00843 SM00893 Electron transfer flavoprotein domain CTY05_00844 SM00893 Electron transfer flavoprotein domain CTY05_00845 SM00434 DNA Topoisomerase IV CTY05_00860 SM00382 ATPases associated with a variety of cellular activities CTY05_00861 SM00849 Metallo-beta-lactamase superfamily CTY05_00884 SM00382 ATPases associated with a variety of cellular activities CTY05_00885 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CTY05_00886 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CTY05_00887 SM01211 CTY05_00887 CTY05_00902 SM00382 ATPases associated with a variety of cellular activities CTY05_00912 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CTY05_00914 SM00838 Elongation factor G C-terminus CTY05_00917 SM00358 Double-stranded RNA binding motif CTY05_00917 SM00535 Ribonuclease III family CTY05_00930 SM00267 diguanylate cyclase CTY05_00932 SM00487 DEAD-like helicases superfamily CTY05_00932 SM00490 helicase superfamily c-terminal domain CTY05_00935 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CTY05_00939 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CTY05_00959 SM01329 CTY05_00959 CTY05_00970 SM00880 CTY05_00970 CTY05_00970 SM01118 CTY05_00970 CTY05_00982 SM00487 DEAD-like helicases superfamily CTY05_00982 SM00490 helicase superfamily c-terminal domain CTY05_00993 SM00344 helix_turn_helix ASNC type CTY05_00999 SM00382 ATPases associated with a variety of cellular activities CTY05_01008 SM00936 Penicillin-binding protein 5, C-terminal domain CTY05_01012 SM00257 Lysin motif CTY05_01019 SM00052 Putative diguanylate phosphodiesterase CTY05_01022 SM00841 Elongation factor P, C-terminal CTY05_01022 SM01185 CTY05_01022 CTY05_01042 SM00382 ATPases associated with a variety of cellular activities CTY05_01051 SM00382 ATPases associated with a variety of cellular activities CTY05_01052 SM00382 ATPases associated with a variety of cellular activities CTY05_01063 SM01092 CO dehydrogenase flavoprotein C-terminal domain CTY05_01064 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CTY05_01066 SM00463 Small MutS-related domain CTY05_01074 SM01230 CTY05_01074 CTY05_01085 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CTY05_01087 SM00919 Malic enzyme, NAD binding domain CTY05_01087 SM01274 CTY05_01087 CTY05_01088 SM00052 Putative diguanylate phosphodiesterase CTY05_01088 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CTY05_01088 SM00091 PAS domain CTY05_01088 SM00267 diguanylate cyclase CTY05_01091 SM00996 S-adenosyl-L-homocysteine hydrolase CTY05_01091 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CTY05_01095 SM00729 Elongator protein 3, MiaB family, Radical SAM CTY05_01105 SM00342 helix_turn_helix, arabinose operon control protein CTY05_01115 SM00382 ATPases associated with a variety of cellular activities CTY05_01118 SM00479 CTY05_01118 CTY05_01125 SM00062 Bacterial periplasmic substrate-binding proteins CTY05_01128 SM00382 ATPases associated with a variety of cellular activities CTY05_01132 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_01137 SM00382 ATPases associated with a variety of cellular activities CTY05_01139 SM00448 cheY-homologous receiver domain CTY05_01139 SM00862 Transcriptional regulatory protein, C terminal CTY05_01140 SM00387 Histidine kinase-like ATPases CTY05_01140 SM00388 His Kinase A (phosphoacceptor) domain CTY05_01151 SM00830 Chorismate mutase type II CTY05_01163 SM00357 Cold shock protein domain CTY05_01164 SM00487 DEAD-like helicases superfamily CTY05_01164 SM00490 helicase superfamily c-terminal domain CTY05_01168 SM00855 Phosphoglycerate mutase family CTY05_01184 SM00220 Serine/Threonine protein kinases, catalytic domain CTY05_01199 SM01034 Sensors of blue-light using FAD CTY05_01202 SM00342 helix_turn_helix, arabinose operon control protein CTY05_01211 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_01211 SM00895 CTY05_01211 CTY05_01214 SM00972 Spore Coat Protein U domain CTY05_01219 SM00972 Spore Coat Protein U domain CTY05_01230 SM00095 Transthyretin CTY05_01232 SM00448 cheY-homologous receiver domain CTY05_01232 SM00862 Transcriptional regulatory protein, C terminal CTY05_01233 SM00387 Histidine kinase-like ATPases CTY05_01233 SM00388 His Kinase A (phosphoacceptor) domain CTY05_01241 SM00388 His Kinase A (phosphoacceptor) domain CTY05_01242 SM00448 cheY-homologous receiver domain CTY05_01242 SM00862 Transcriptional regulatory protein, C terminal CTY05_01254 SM00849 Metallo-beta-lactamase superfamily CTY05_01256 SM00382 ATPases associated with a variety of cellular activities CTY05_01256 SM00930 CTY05_01256 CTY05_01258 SM01209 CTY05_01258 CTY05_01258 SM01210 CTY05_01258 CTY05_01259 SM00798 AICARFT/IMPCHase bienzyme CTY05_01259 SM00851 MGS-like domain CTY05_01264 SM01228 CTY05_01264 CTY05_01268 SM00460 Transglutaminase/protease-like homologues CTY05_01270 SM01005 Alanine racemase, C-terminal domain CTY05_01293 SM00937 CTY05_01293 CTY05_01296 SM00062 Bacterial periplasmic substrate-binding proteins CTY05_01297 SM00342 helix_turn_helix, arabinose operon control protein CTY05_01298 SM00822 CTY05_01298 CTY05_01301 SM00903 Flavin reductase like domain CTY05_01304 SM00905 Dihydroneopterin aldolase CTY05_01309 SM00387 Histidine kinase-like ATPases CTY05_01309 SM00388 His Kinase A (phosphoacceptor) domain CTY05_01310 SM00448 cheY-homologous receiver domain CTY05_01310 SM00862 Transcriptional regulatory protein, C terminal CTY05_01311 SM01230 CTY05_01311 CTY05_01327 SM00363 S4 RNA-binding domain CTY05_01332 SM00853 MutL C terminal dimerisation domain CTY05_01332 SM01340 CTY05_01332 CTY05_01345 SM00862 Transcriptional regulatory protein, C terminal CTY05_01348 SM00382 ATPases associated with a variety of cellular activities CTY05_01354 SM00972 Spore Coat Protein U domain CTY05_01357 SM00972 Spore Coat Protein U domain CTY05_01361 SM00830 Chorismate mutase type II CTY05_01362 SM00344 helix_turn_helix ASNC type CTY05_01379 SM00382 ATPases associated with a variety of cellular activities CTY05_01384 SM00831 Cation transporter/ATPase, N-terminus CTY05_01387 SM00344 helix_turn_helix ASNC type CTY05_01393 SM00822 CTY05_01393 CTY05_01398 SM00382 ATPases associated with a variety of cellular activities CTY05_01404 SM00226 Low molecular weight phosphatase family CTY05_01411 SM01236 CTY05_01411 CTY05_01414 SM00878 Biotin carboxylase C-terminal domain CTY05_01419 SM00448 cheY-homologous receiver domain CTY05_01419 SM01012 CTY05_01419 CTY05_01423 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CTY05_01425 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CTY05_01426 SM00729 Elongator protein 3, MiaB family, Radical SAM CTY05_01429 SM00852 Probable molybdopterin binding domain CTY05_01430 SM00852 Probable molybdopterin binding domain CTY05_01432 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_01449 SM00382 ATPases associated with a variety of cellular activities CTY05_01449 SM00448 cheY-homologous receiver domain CTY05_01450 SM00091 PAS domain CTY05_01450 SM00387 Histidine kinase-like ATPases CTY05_01450 SM00388 His Kinase A (phosphoacceptor) domain CTY05_01451 SM00729 Elongator protein 3, MiaB family, Radical SAM CTY05_01457 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CTY05_01459 SM00935 Outer membrane protein (OmpH-like) CTY05_01465 SM00382 ATPases associated with a variety of cellular activities CTY05_01466 SM00363 S4 RNA-binding domain CTY05_01472 SM00344 helix_turn_helix ASNC type CTY05_01481 SM00052 Putative diguanylate phosphodiesterase CTY05_01481 SM00091 PAS domain CTY05_01481 SM00267 diguanylate cyclase CTY05_01483 SM00347 helix_turn_helix multiple antibiotic resistance protein CTY05_01498 SM00116 Domain in cystathionine beta-synthase and other proteins. CTY05_01503 SM00382 ATPases associated with a variety of cellular activities CTY05_01503 SM00962 SRP54-type protein, GTPase domain CTY05_01503 SM00963 SRP54-type protein, helical bundle domain CTY05_01515 SM01264 CTY05_01515 CTY05_01523 SM00859 Semialdehyde dehydrogenase, NAD binding domain CTY05_01526 SM00382 ATPases associated with a variety of cellular activities CTY05_01526 SM01086 C-terminal, D2-small domain, of ClpB protein CTY05_01539 SM01192 CTY05_01539 CTY05_01539 SM01193 CTY05_01539 CTY05_01543 SM00882 Coenzyme A transferase CTY05_01544 SM00882 Coenzyme A transferase CTY05_01546 SM00998 Adenylosuccinate lyase C-terminus CTY05_01553 SM00710 Parallel beta-helix repeats CTY05_01555 SM00564 beta-propeller repeat CTY05_01559 SM00849 Metallo-beta-lactamase superfamily CTY05_01560 SM00346 helix_turn_helix isocitrate lyase regulation CTY05_01564 SM00855 Phosphoglycerate mutase family CTY05_01568 SM00347 helix_turn_helix multiple antibiotic resistance protein CTY05_01577 SM00903 Flavin reductase like domain CTY05_01578 SM00342 helix_turn_helix, arabinose operon control protein CTY05_01585 SM00882 Coenzyme A transferase CTY05_01586 SM00882 Coenzyme A transferase CTY05_01589 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CTY05_01592 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_01592 SM00895 CTY05_01592 CTY05_01602 SM00422 helix_turn_helix, mercury resistance CTY05_01608 SM00342 helix_turn_helix, arabinose operon control protein CTY05_01628 SM00860 SMI1 / KNR4 family CTY05_01635 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_01635 SM00866 CTY05_01635 CTY05_01651 SM00342 helix_turn_helix, arabinose operon control protein CTY05_01652 SM01400 CTY05_01652 CTY05_01657 SM00421 helix_turn_helix, Lux Regulon CTY05_01668 SM00487 DEAD-like helicases superfamily CTY05_01668 SM00490 helicase superfamily c-terminal domain CTY05_01676 SM00822 CTY05_01676 CTY05_01677 SM00822 CTY05_01677 CTY05_01679 SM00342 helix_turn_helix, arabinose operon control protein CTY05_01681 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTY05_01681 SM00387 Histidine kinase-like ATPases CTY05_01681 SM00388 His Kinase A (phosphoacceptor) domain CTY05_01682 SM00448 cheY-homologous receiver domain CTY05_01682 SM00862 Transcriptional regulatory protein, C terminal CTY05_01698 SM00829 Enoylreductase CTY05_01703 SM00155 Phospholipase D. Active site motifs. CTY05_01708 SM00729 Elongator protein 3, MiaB family, Radical SAM CTY05_01717 SM00382 ATPases associated with a variety of cellular activities CTY05_01724 SM00342 helix_turn_helix, arabinose operon control protein CTY05_01726 SM00903 Flavin reductase like domain CTY05_01731 SM00342 helix_turn_helix, arabinose operon control protein CTY05_01736 SM00882 Coenzyme A transferase CTY05_01737 SM00882 Coenzyme A transferase CTY05_01748 SM00567 E-Z type HEAT repeats CTY05_01749 SM00382 ATPases associated with a variety of cellular activities CTY05_01754 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_01754 SM00866 CTY05_01754 CTY05_01758 SM00342 helix_turn_helix, arabinose operon control protein CTY05_01763 SM00849 Metallo-beta-lactamase superfamily CTY05_01764 SM00382 ATPases associated with a variety of cellular activities CTY05_01766 SM00829 Enoylreductase CTY05_01770 SM00861 Transketolase, pyrimidine binding domain CTY05_01772 SM00729 Elongator protein 3, MiaB family, Radical SAM CTY05_01775 SM00267 diguanylate cyclase CTY05_01780 SM00382 ATPases associated with a variety of cellular activities CTY05_01786 SM00341 Helicase and RNase D C-terminal CTY05_01786 SM00474 3'-5' exonuclease CTY05_01787 SM00493 CTY05_01787 CTY05_01797 SM01324 CTY05_01797 CTY05_01812 SM00855 Phosphoglycerate mutase family CTY05_01817 SM01006 Siderophore biosynthesis protein domain CTY05_01835 SM00342 helix_turn_helix, arabinose operon control protein CTY05_01837 SM00411 bacterial (prokaryotic) histone like domain CTY05_01844 SM00271 DnaJ molecular chaperone homology domain CTY05_01847 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CTY05_01849 SM00487 DEAD-like helicases superfamily CTY05_01849 SM00490 helicase superfamily c-terminal domain CTY05_01849 SM00982 CTY05_01849 CTY05_01849 SM01058 CarD-like/TRCF domain CTY05_01860 SM00382 ATPases associated with a variety of cellular activities CTY05_01874 SM00342 helix_turn_helix, arabinose operon control protein CTY05_01877 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CTY05_01879 SM00411 bacterial (prokaryotic) histone like domain CTY05_01880 SM00316 Ribosomal protein S1-like RNA-binding domain CTY05_01885 SM00986 Uracil DNA glycosylase superfamily CTY05_01885 SM00987 UreE urease accessory protein, C-terminal domain CTY05_01897 SM00382 ATPases associated with a variety of cellular activities CTY05_01900 SM00470 ParB-like nuclease domain CTY05_01912 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CTY05_01914 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CTY05_01918 SM00382 ATPases associated with a variety of cellular activities CTY05_01920 SM00342 helix_turn_helix, arabinose operon control protein CTY05_01924 SM00344 helix_turn_helix ASNC type CTY05_01931 SM00867 YceI-like domain CTY05_01933 SM00861 Transketolase, pyrimidine binding domain CTY05_01940 SM00530 Helix-turn-helix XRE-family like proteins CTY05_01944 SM00729 Elongator protein 3, MiaB family, Radical SAM CTY05_01944 SM00876 Biotin and Thiamin Synthesis associated domain CTY05_01961 SM01236 CTY05_01961 CTY05_01963 SM00563 Phosphate acyltransferases CTY05_01965 SM00344 helix_turn_helix ASNC type CTY05_01967 SM00382 ATPases associated with a variety of cellular activities CTY05_01970 SM00062 Bacterial periplasmic substrate-binding proteins CTY05_01977 SM00382 ATPases associated with a variety of cellular activities CTY05_01977 SM00930 CTY05_01977 CTY05_01981 SM00100 Cyclic nucleotide-monophosphate binding domain CTY05_01981 SM00419 helix_turn_helix, cAMP Regulatory protein CTY05_01988 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CTY05_01991 SM00342 helix_turn_helix, arabinose operon control protein CTY05_01996 SM00870 CTY05_01996 CTY05_01997 SM00481 DNA polymerase alpha chain like domain CTY05_02007 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CTY05_02013 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_02013 SM00895 CTY05_02013 CTY05_02018 SM00382 ATPases associated with a variety of cellular activities CTY05_02019 SM00062 Bacterial periplasmic substrate-binding proteins CTY05_02028 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_02032 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CTY05_02042 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_02049 SM00822 CTY05_02049 CTY05_02050 SM00450 Rhodanese Homology Domain CTY05_02056 SM00062 Bacterial periplasmic substrate-binding proteins CTY05_02057 SM00062 Bacterial periplasmic substrate-binding proteins CTY05_02058 SM00382 ATPases associated with a variety of cellular activities CTY05_02062 SM00421 helix_turn_helix, Lux Regulon CTY05_02062 SM00448 cheY-homologous receiver domain CTY05_02063 SM00387 Histidine kinase-like ATPases CTY05_02063 SM00388 His Kinase A (phosphoacceptor) domain CTY05_02063 SM00448 cheY-homologous receiver domain CTY05_02065 SM00344 helix_turn_helix ASNC type CTY05_02069 SM00384 DNA binding domain with preference for A/T rich regions CTY05_02072 SM01060 CTY05_02072 CTY05_02073 SM01236 CTY05_02073 CTY05_02091 SM00878 Biotin carboxylase C-terminal domain CTY05_02100 SM00882 Coenzyme A transferase CTY05_02101 SM00882 Coenzyme A transferase CTY05_02108 SM00346 helix_turn_helix isocitrate lyase regulation CTY05_02112 SM00346 helix_turn_helix isocitrate lyase regulation CTY05_02120 SM00382 ATPases associated with a variety of cellular activities CTY05_02122 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_02122 SM00866 CTY05_02122 CTY05_02124 SM00346 helix_turn_helix isocitrate lyase regulation CTY05_02133 SM00903 Flavin reductase like domain CTY05_02136 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_02136 SM00895 CTY05_02136 CTY05_02139 SM01060 CTY05_02139 CTY05_02148 SM00357 Cold shock protein domain CTY05_02174 SM00342 helix_turn_helix, arabinose operon control protein CTY05_02179 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_02179 SM00895 CTY05_02179 CTY05_02181 SM01130 CTY05_02181 CTY05_02184 SM00422 helix_turn_helix, mercury resistance CTY05_02191 SM00248 ankyrin repeats CTY05_02198 SM00382 ATPases associated with a variety of cellular activities CTY05_02198 SM01086 C-terminal, D2-small domain, of ClpB protein CTY05_02213 SM00382 ATPases associated with a variety of cellular activities CTY05_02220 SM00796 Allophanate hydrolase subunit 1 CTY05_02220 SM00797 Allophanate hydrolase subunit 2 CTY05_02220 SM00878 Biotin carboxylase C-terminal domain CTY05_02223 SM00829 Enoylreductase CTY05_02229 SM00671 Sel1-like repeats. CTY05_02231 SM00878 Biotin carboxylase C-terminal domain CTY05_02232 SM00796 Allophanate hydrolase subunit 1 CTY05_02232 SM00797 Allophanate hydrolase subunit 2 CTY05_02255 SM00052 Putative diguanylate phosphodiesterase CTY05_02258 SM00344 helix_turn_helix ASNC type CTY05_02259 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CTY05_02259 SM00534 ATPase domain of DNA mismatch repair MUTS family CTY05_02268 SM00382 ATPases associated with a variety of cellular activities CTY05_02270 SM00382 ATPases associated with a variety of cellular activities CTY05_02274 SM00116 Domain in cystathionine beta-synthase and other proteins. CTY05_02275 SM00840 CTY05_02275 CTY05_02286 SM00710 Parallel beta-helix repeats CTY05_02287 SM00060 Fibronectin type 3 domain CTY05_02315 SM00357 Cold shock protein domain CTY05_02319 SM00530 Helix-turn-helix XRE-family like proteins CTY05_02329 SM00422 helix_turn_helix, mercury resistance CTY05_02341 SM00382 ATPases associated with a variety of cellular activities CTY05_02341 SM00487 DEAD-like helicases superfamily CTY05_02341 SM00490 helicase superfamily c-terminal domain CTY05_02341 SM00847 Helicase associated domain (HA2) Add an annotation CTY05_02357 SM00981 CTY05_02357 CTY05_02360 SM00382 ATPases associated with a variety of cellular activities CTY05_02360 SM01086 C-terminal, D2-small domain, of ClpB protein CTY05_02364 SM00100 Cyclic nucleotide-monophosphate binding domain CTY05_02364 SM00419 helix_turn_helix, cAMP Regulatory protein CTY05_02368 SM00788 Adenylosuccinate synthetase CTY05_02370 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CTY05_02371 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CTY05_02389 SM00342 helix_turn_helix, arabinose operon control protein CTY05_02398 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_02398 SM00895 CTY05_02398 CTY05_02399 SM00347 helix_turn_helix multiple antibiotic resistance protein CTY05_02409 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_02409 SM00895 CTY05_02409 CTY05_02411 SM01130 CTY05_02411 CTY05_02412 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CTY05_02414 SM00858 CTY05_02414 CTY05_02416 SM00342 helix_turn_helix, arabinose operon control protein CTY05_02424 SM00344 helix_turn_helix ASNC type CTY05_02427 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_02427 SM00895 CTY05_02427 CTY05_02447 SM00267 diguanylate cyclase CTY05_02449 SM00479 CTY05_02449 CTY05_02459 SM00382 ATPases associated with a variety of cellular activities CTY05_02463 SM00257 Lysin motif CTY05_02464 SM00479 CTY05_02464 CTY05_02475 SM00422 helix_turn_helix, mercury resistance CTY05_02479 SM01011 Aminopeptidase P, N-terminal domain CTY05_02485 SM00357 Cold shock protein domain CTY05_02540 SM00530 Helix-turn-helix XRE-family like proteins CTY05_02541 SM00382 ATPases associated with a variety of cellular activities CTY05_02557 SM00382 ATPases associated with a variety of cellular activities CTY05_02557 SM00464 Found in ATP-dependent protease La (LON) CTY05_02561 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CTY05_02563 SM00478 endonuclease III CTY05_02572 SM00988 UreE urease accessory protein, N-terminal domain CTY05_02581 SM01091 Transporter associated domain CTY05_02601 SM00382 ATPases associated with a variety of cellular activities CTY05_02603 SM00947 Carbonic anhydrase CTY05_02615 SM01018 B12 binding domain CTY05_02616 SM00861 Transketolase, pyrimidine binding domain CTY05_02619 SM00822 CTY05_02619 CTY05_02624 SM00342 helix_turn_helix, arabinose operon control protein CTY05_02643 SM00346 helix_turn_helix isocitrate lyase regulation CTY05_02651 SM01322 CTY05_02651 CTY05_02670 SM01130 CTY05_02670 CTY05_02686 SM01004 Delta-aminolevulinic acid dehydratase CTY05_02695 SM00382 ATPases associated with a variety of cellular activities CTY05_02709 SM00563 Phosphate acyltransferases CTY05_02716 SM00843 CTY05_02716 CTY05_02724 SM00838 Elongation factor G C-terminus CTY05_02724 SM00889 Elongation factor G, domain IV CTY05_02728 SM00825 Beta-ketoacyl synthase CTY05_02740 SM01329 CTY05_02740 CTY05_02749 SM00363 S4 RNA-binding domain CTY05_02751 SM00400 zinc finger CTY05_02751 SM00493 CTY05_02751 CTY05_02753 SM00028 Tetratricopeptide repeats CTY05_02759 SM01400 CTY05_02759 CTY05_02768 SM00257 Lysin motif CTY05_02770 SM00822 CTY05_02770 CTY05_02771 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CTY05_02778 SM00363 S4 RNA-binding domain CTY05_02788 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CTY05_02788 SM00292 breast cancer carboxy-terminal domain CTY05_02788 SM00532 Ligase N family CTY05_02789 SM00771 ZipA, C-terminal domain (FtsZ-binding) CTY05_02791 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_02795 SM00382 ATPases associated with a variety of cellular activities CTY05_02795 SM00962 SRP54-type protein, GTPase domain CTY05_02795 SM00963 SRP54-type protein, helical bundle domain CTY05_02824 SM00357 Cold shock protein domain CTY05_02833 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CTY05_02833 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CTY05_02834 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CTY05_02839 SM00267 diguanylate cyclase CTY05_02841 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTY05_02841 SM00387 Histidine kinase-like ATPases CTY05_02841 SM00388 His Kinase A (phosphoacceptor) domain CTY05_02842 SM00448 cheY-homologous receiver domain CTY05_02842 SM00862 Transcriptional regulatory protein, C terminal CTY05_02854 SM00903 Flavin reductase like domain CTY05_02860 SM00342 helix_turn_helix, arabinose operon control protein CTY05_02914 SM00331 Sigma factor PP2C-like phosphatases CTY05_02918 SM00347 helix_turn_helix multiple antibiotic resistance protein CTY05_02920 SM00382 ATPases associated with a variety of cellular activities CTY05_02924 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CTY05_02924 SM00474 3'-5' exonuclease CTY05_02924 SM00475 5'-3' exonuclease CTY05_02924 SM00482 DNA polymerase A domain CTY05_02927 SM00977 TilS substrate C-terminal domain CTY05_02931 SM00357 Cold shock protein domain CTY05_02931 SM00382 ATPases associated with a variety of cellular activities CTY05_02931 SM00959 Rho termination factor, N-terminal domain CTY05_02933 SM00411 bacterial (prokaryotic) histone like domain CTY05_02934 SM00873 B3/4 domain CTY05_02934 SM00874 tRNA synthetase B5 domain CTY05_02934 SM00896 Ferredoxin-fold anticodon binding domain CTY05_02944 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CTY05_02953 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CTY05_02956 SM00954 Region found in RelA / SpoT proteins CTY05_02960 SM00073 Histidine Phosphotransfer domain CTY05_02960 SM00387 Histidine kinase-like ATPases CTY05_02960 SM00388 His Kinase A (phosphoacceptor) domain CTY05_02960 SM00448 cheY-homologous receiver domain CTY05_02968 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CTY05_02968 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CTY05_02981 SM01236 CTY05_02981 CTY05_02984 SM00052 Putative diguanylate phosphodiesterase CTY05_02984 SM00267 diguanylate cyclase CTY05_02993 SM00382 ATPases associated with a variety of cellular activities CTY05_02997 SM00479 CTY05_02997 CTY05_02999 SM00450 Rhodanese Homology Domain CTY05_03004 SM00564 beta-propeller repeat CTY05_03009 SM00028 Tetratricopeptide repeats CTY05_03011 SM00562 CTY05_03011 CTY05_03013 SM00014 Acid phosphatase homologues CTY05_03015 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CTY05_03015 SM00245 tail specific protease CTY05_03030 SM00382 ATPases associated with a variety of cellular activities CTY05_03030 SM00994 ClpX C4-type zinc finger CTY05_03030 SM01086 C-terminal, D2-small domain, of ClpB protein CTY05_03034 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CTY05_03035 SM00917 LeuA allosteric (dimerisation) domain CTY05_03038 SM00671 Sel1-like repeats. CTY05_03066 SM00360 RNA recognition motif CTY05_03070 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CTY05_03070 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CTY05_03070 SM00493 CTY05_03070 CTY05_03073 SM00829 Enoylreductase CTY05_03075 SM00382 ATPases associated with a variety of cellular activities CTY05_03081 SM00859 Semialdehyde dehydrogenase, NAD binding domain CTY05_03084 SM00870 CTY05_03084 CTY05_03086 SM00342 helix_turn_helix, arabinose operon control protein CTY05_03087 SM00316 Ribosomal protein S1-like RNA-binding domain CTY05_03090 SM01329 CTY05_03090 CTY05_03098 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CTY05_03106 SM00363 S4 RNA-binding domain CTY05_03107 SM00316 Ribosomal protein S1-like RNA-binding domain CTY05_03113 SM00729 Elongator protein 3, MiaB family, Radical SAM CTY05_03126 SM00849 Metallo-beta-lactamase superfamily CTY05_03134 SM00116 Domain in cystathionine beta-synthase and other proteins. CTY05_03134 SM01091 Transporter associated domain CTY05_03140 SM00487 DEAD-like helicases superfamily CTY05_03140 SM00490 helicase superfamily c-terminal domain CTY05_03144 SM00271 DnaJ molecular chaperone homology domain CTY05_03147 SM00316 Ribosomal protein S1-like RNA-binding domain CTY05_03147 SM00322 K homology RNA-binding domain CTY05_03148 SM01387 CTY05_03148 CTY05_03150 SM00382 ATPases associated with a variety of cellular activities CTY05_03172 SM00316 Ribosomal protein S1-like RNA-binding domain CTY05_03184 SM00967 RNA 2'-O ribose methyltransferase substrate binding CTY05_03186 SM00028 Tetratricopeptide repeats CTY05_03189 SM00732 Likely ribonuclease with RNase H fold. CTY05_03193 SM00346 helix_turn_helix isocitrate lyase regulation CTY05_03195 SM00342 helix_turn_helix, arabinose operon control protein CTY05_03198 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CTY05_03198 SM00465 GIY-YIG type nucleases (URI domain) CTY05_03206 SM00422 helix_turn_helix, mercury resistance CTY05_03211 SM00387 Histidine kinase-like ATPases CTY05_03219 SM00663 RNA polymerase I subunit A N-terminus CTY05_03224 SM00649 Ribosomal protein L11/L12 CTY05_03225 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CTY05_03225 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CTY05_03235 SM00240 Forkhead associated domain CTY05_03237 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CTY05_03239 SM00528 Domain in histone-like proteins of HNS family CTY05_03245 SM00448 cheY-homologous receiver domain CTY05_03245 SM00850 LytTr DNA-binding domain CTY05_03263 SM00899 CTY05_03263 CTY05_03269 SM00421 helix_turn_helix, Lux Regulon CTY05_03269 SM00448 cheY-homologous receiver domain CTY05_03270 SM00387 Histidine kinase-like ATPases CTY05_03270 SM00388 His Kinase A (phosphoacceptor) domain CTY05_03271 SM00382 ATPases associated with a variety of cellular activities CTY05_03271 SM00448 cheY-homologous receiver domain CTY05_03272 SM00245 tail specific protease CTY05_03285 SM00938 Nitrogen regulatory protein P-II CTY05_03287 SM00382 ATPases associated with a variety of cellular activities CTY05_03288 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_03289 SM01007 Class II Aldolase and Adducin N-terminal domain CTY05_03290 SM01130 CTY05_03290 CTY05_03297 SM00434 DNA Topoisomerase IV CTY05_03301 SM01091 Transporter associated domain CTY05_03304 SM00641 Glycosyl hydrolases family 25 CTY05_03308 SM00729 Elongator protein 3, MiaB family, Radical SAM CTY05_03310 SM00422 helix_turn_helix, mercury resistance CTY05_03330 SM00342 helix_turn_helix, arabinose operon control protein CTY05_03334 SM00382 ATPases associated with a variety of cellular activities CTY05_03344 SM00382 ATPases associated with a variety of cellular activities CTY05_03348 SM00919 Malic enzyme, NAD binding domain CTY05_03348 SM01274 CTY05_03348 CTY05_03349 SM00836 DALR anticodon binding domain CTY05_03349 SM01016 Arginyl tRNA synthetase N terminal dom CTY05_03372 SM00823 Phosphopantetheine attachment site CTY05_03372 SM00824 Thioesterase CTY05_03373 SM00823 Phosphopantetheine attachment site CTY05_03373 SM01294 CTY05_03373 CTY05_03376 SM00421 helix_turn_helix, Lux Regulon CTY05_03390 SM01005 Alanine racemase, C-terminal domain CTY05_03392 SM00344 helix_turn_helix ASNC type CTY05_03408 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_03408 SM00895 CTY05_03408 CTY05_03412 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTY05_03412 SM00895 CTY05_03412 CTY05_03416 SM00984 UDP binding domain CTY05_03428 SM00984 UDP binding domain CTY05_03430 SM00226 Low molecular weight phosphatase family CTY05_03435 SM00644 CTY05_03435 CTY05_03451 SM00062 Bacterial periplasmic substrate-binding proteins CTY05_03452 SM00062 Bacterial periplasmic substrate-binding proteins CTY05_03455 SM00382 ATPases associated with a variety of cellular activities CTY05_03459 SM00904 Riboflavin kinase CTY05_03464 SM00248 ankyrin repeats CTY05_03471 SM00849 Metallo-beta-lactamase superfamily CTY05_03475 SM00235 Zinc-dependent metalloprotease CTY05_03476 SM00235 Zinc-dependent metalloprotease CTY05_03481 SM01001 AIR carboxylase CTY05_03485 SM00014 Acid phosphatase homologues CTY05_03499 SM01234 CTY05_03499