locus-tag class description NV385_00005 PF00308 Bacterial dnaA protein NV385_00005 PF08299 Bacterial dnaA protein helix-turn-helix NV385_00005 PF11638 DnaA N-terminal domain NV385_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NV385_00010 PF02767 DNA polymerase III beta subunit, central domain NV385_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NV385_00015 PF02463 RecF/RecN/SMC N terminal domain NV385_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_00020 PF18053 DNA gyrase B subunit insert domain NV385_00020 PF01751 Toprim domain NV385_00020 PF00204 DNA gyrase B NV385_00020 PF00986 DNA gyrase B subunit, carboxyl terminus NV385_00030 PF09335 SNARE associated Golgi protein NV385_00035 PF00005 ABC transporter NV385_00035 PF12848 ABC transporter NV385_00055 PF01521 Iron-sulphur cluster biosynthesis NV385_00060 PF00561 alpha/beta hydrolase fold NV385_00065 PF03702 Anhydro-N-acetylmuramic acid kinase NV385_00070 PF00579 tRNA synthetases class I (W and Y) NV385_00115 PF00209 Sodium:neurotransmitter symporter family NV385_00125 PF01029 NusB family NV385_00125 PF01189 16S rRNA methyltransferase RsmB/F NV385_00130 PF00551 Formyl transferase NV385_00130 PF02911 Formyl transferase, C-terminal domain NV385_00135 PF00920 Dehydratase family NV385_00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_00150 PF03466 LysR substrate binding domain NV385_00155 PF00860 Permease family NV385_00160 PF00311 Phosphoenolpyruvate carboxylase NV385_00165 PF08361 MAATS-type transcriptional repressor, C-terminal region NV385_00165 PF00440 Bacterial regulatory proteins, tetR family NV385_00170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NV385_00175 PF00873 AcrB/AcrD/AcrF family NV385_00185 PF00684 DnaJ central domain NV385_00185 PF00226 DnaJ domain NV385_00185 PF01556 DnaJ C terminal domain NV385_00195 PF01113 Dihydrodipicolinate reductase, N-terminus NV385_00195 PF05173 Dihydrodipicolinate reductase, C-terminus NV385_00205 PF07690 Major Facilitator Superfamily NV385_00210 PF00248 Aldo/keto reductase family NV385_00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_00215 PF03466 LysR substrate binding domain NV385_00230 PF00392 Bacterial regulatory proteins, gntR family NV385_00230 PF00155 Aminotransferase class I and II NV385_00235 PF00107 Zinc-binding dehydrogenase NV385_00235 PF08240 Alcohol dehydrogenase GroES-like domain NV385_00240 PF03352 Methyladenine glycosylase NV385_00255 PF10576 Iron-sulfur binding domain of endonuclease III NV385_00255 PF00633 Helix-hairpin-helix motif NV385_00255 PF00730 HhH-GPD superfamily base excision DNA repair protein NV385_00255 PF14815 NUDIX domain NV385_00270 PF07043 Protein of unknown function (DUF1328) NV385_00275 PF03692 Putative zinc- or iron-chelating domain NV385_00280 PF07995 Glucose / Sorbosone dehydrogenase NV385_00285 PF12002 MgsA AAA+ ATPase C terminal NV385_00285 PF16193 AAA C-terminal domain NV385_00285 PF00004 ATPase family associated with various cellular activities (AAA) NV385_00290 PF01226 Formate/nitrite transporter NV385_00300 PF01259 SAICAR synthetase NV385_00310 PF00701 Dihydrodipicolinate synthetase family NV385_00315 PF00857 Isochorismatase family NV385_00320 PF01758 Sodium Bile acid symporter family NV385_00325 PF01554 MatE NV385_00330 PF04463 Protein of unknown function (DUF523) NV385_00335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NV385_00345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NV385_00350 PF14497 Glutathione S-transferase, C-terminal domain NV385_00350 PF02798 Glutathione S-transferase, N-terminal domain NV385_00360 PF00324 Amino acid permease NV385_00370 PF02492 CobW/HypB/UreG, nucleotide-binding domain NV385_00370 PF07683 Cobalamin synthesis protein cobW C-terminal domain NV385_00380 PF00392 Bacterial regulatory proteins, gntR family NV385_00380 PF07702 UTRA domain NV385_00385 PF05962 HutD NV385_00390 PF17392 Urocanase C-terminal domain NV385_00390 PF17391 Urocanase N-terminal domain NV385_00390 PF01175 Urocanase Rossmann-like domain NV385_00395 PF00221 Aromatic amino acid lyase NV385_00400 PF00324 Amino acid permease NV385_00405 PF01979 Amidohydrolase family NV385_00410 PF00491 Arginase family NV385_00425 PF01177 Asp/Glu/Hydantoin racemase NV385_00430 PF01380 SIS domain NV385_00435 PF12804 MobA-like NTP transferase domain NV385_00435 PF00132 Bacterial transferase hexapeptide (six repeats) NV385_00435 PF14602 Hexapeptide repeat of succinyl-transferase NV385_00440 PF04608 Phosphatidylglycerophosphatase A NV385_00445 PF00586 AIR synthase related protein, N-terminal domain NV385_00445 PF02769 AIR synthase related protein, C-terminal domain NV385_00450 PF01029 NusB family NV385_00455 PF00885 6,7-dimethyl-8-ribityllumazine synthase NV385_00460 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NV385_00460 PF00925 GTP cyclohydrolase II NV385_00485 PF02580 D-Tyr-tRNA(Tyr) deacylase NV385_00490 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NV385_00490 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NV385_00495 PF00581 Rhodanese-like domain NV385_00500 PF02666 Phosphatidylserine decarboxylase NV385_00505 PF03069 Acetamidase/Formamidase family NV385_00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_00525 PF00512 His Kinase A (phospho-acceptor) domain NV385_00525 PF00989 PAS fold NV385_00525 PF11808 Phosphate regulon sensor protein PhoR NV385_00530 PF00072 Response regulator receiver domain NV385_00530 PF00486 Transcriptional regulatory protein, C terminal NV385_00540 PF00106 short chain dehydrogenase NV385_00545 PF01554 MatE NV385_00550 PF00155 Aminotransferase class I and II NV385_00555 PF04286 Protein of unknown function (DUF445) NV385_00570 PF04262 Glutamate-cysteine ligase NV385_00575 PF02600 Disulfide bond formation protein DsbB NV385_00580 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NV385_00580 PF04717 Type VI secretion system, phage-baseplate injector NV385_00580 PF13296 Putative type VI secretion system Rhs element Vgr NV385_00585 PF01476 LysM domain NV385_00585 PF00877 NlpC/P60 family NV385_00600 PF05728 Uncharacterised protein family (UPF0227) NV385_00605 PF01751 Toprim domain NV385_00605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_00605 PF00986 DNA gyrase B subunit, carboxyl terminus NV385_00605 PF00204 DNA gyrase B NV385_00610 PF00106 short chain dehydrogenase NV385_00615 PF04115 Ureidoglycolate lyase NV385_00620 PF03561 Allantoicase repeat NV385_00625 PF01494 FAD binding domain NV385_00635 PF00860 Permease family NV385_00640 PF00576 HIUase/Transthyretin family NV385_00670 PF11412 Disulphide bond corrector protein DsbC NV385_00670 PF02683 Cytochrome C biogenesis protein transmembrane region NV385_00675 PF07694 5TMR of 5TMR-LYT NV385_00675 PF00990 Diguanylate cyclase, GGDEF domain NV385_00680 PF07859 alpha/beta hydrolase fold NV385_00690 PF03960 ArsC family NV385_00695 PF03372 Endonuclease/Exonuclease/phosphatase family NV385_00700 PF00156 Phosphoribosyl transferase domain NV385_00705 PF07715 TonB-dependent Receptor Plug Domain NV385_00705 PF00593 TonB dependent receptor NV385_00715 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NV385_00715 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NV385_00720 PF04101 Glycosyltransferase family 28 C-terminal domain NV385_00720 PF03033 Glycosyltransferase family 28 N-terminal domain NV385_00725 PF01225 Mur ligase family, catalytic domain NV385_00725 PF02875 Mur ligase family, glutamate ligase domain NV385_00725 PF08245 Mur ligase middle domain NV385_00730 PF01820 D-ala D-ala ligase N-terminus NV385_00730 PF07478 D-ala D-ala ligase C-terminus NV385_00735 PF08478 POTRA domain, FtsQ-type NV385_00735 PF03799 Cell division protein FtsQ NV385_00740 PF02491 SHS2 domain inserted in FTSA NV385_00745 PF12327 FtsZ family, C-terminal domain NV385_00745 PF00091 Tubulin/FtsZ family, GTPase domain NV385_00750 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NV385_00760 PF01551 Peptidase family M23 NV385_00765 PF17831 Pyruvate dehydrogenase E1 component middle domain NV385_00765 PF00456 Transketolase, thiamine diphosphate binding domain NV385_00770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NV385_00770 PF00364 Biotin-requiring enzyme NV385_00770 PF02817 e3 binding domain NV385_00780 PF01169 Uncharacterized protein family UPF0016 NV385_00785 PF00593 TonB dependent receptor NV385_00785 PF07715 TonB-dependent Receptor Plug Domain NV385_00790 PF01613 Flavin reductase like domain NV385_00790 PF00258 Flavodoxin NV385_00795 PF03692 Putative zinc- or iron-chelating domain NV385_00800 PF00478 IMP dehydrogenase / GMP reductase domain NV385_00800 PF00571 CBS domain NV385_00805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NV385_00805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NV385_00805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NV385_00805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NV385_00810 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NV385_00810 PF01243 Pyridoxamine 5'-phosphate oxidase NV385_00815 PF01368 DHH family NV385_00815 PF02272 DHHA1 domain NV385_00815 PF17768 RecJ OB domain NV385_00835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NV385_00840 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NV385_00845 PF04452 RNA methyltransferase NV385_00850 PF00924 Mechanosensitive ion channel NV385_00860 PF16177 Acetyl-coenzyme A synthetase N-terminus NV385_00860 PF00501 AMP-binding enzyme NV385_00860 PF13193 AMP-binding enzyme C-terminal domain NV385_00865 PF00857 Isochorismatase family NV385_00870 PF01037 Lrp/AsnC ligand binding domain NV385_00875 PF00872 Transposase, Mutator family NV385_00880 PF00296 Luciferase-like monooxygenase NV385_00885 PF03358 NADPH-dependent FMN reductase NV385_00895 PF00072 Response regulator receiver domain NV385_00895 PF00196 Bacterial regulatory proteins, luxR family NV385_00905 PF00072 Response regulator receiver domain NV385_00905 PF01627 Hpt domain NV385_00905 PF00512 His Kinase A (phospho-acceptor) domain NV385_00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_00905 PF00672 HAMP domain NV385_00910 PF04341 Protein of unknown function, DUF485 NV385_00915 PF00474 Sodium:solute symporter family NV385_00925 PF02028 BCCT, betaine/carnitine/choline family transporter NV385_00935 PF00990 Diguanylate cyclase, GGDEF domain NV385_00945 PF00005 ABC transporter NV385_00945 PF17755 UvrA DNA-binding domain NV385_00945 PF17760 UvrA interaction domain NV385_00950 PF16925 Tetracyclin repressor-like, C-terminal domain NV385_00950 PF00440 Bacterial regulatory proteins, tetR family NV385_00955 PF00107 Zinc-binding dehydrogenase NV385_00955 PF08240 Alcohol dehydrogenase GroES-like domain NV385_00965 PF06942 GlpM protein NV385_00970 PF03070 TENA/THI-4/PQQC family NV385_00970 PF08543 Phosphomethylpyrimidine kinase NV385_00970 PF02581 Thiamine monophosphate synthase NV385_00980 PF07690 Major Facilitator Superfamily NV385_00985 PF00436 Single-strand binding protein family NV385_00995 PF03591 AzlC protein NV385_01005 PF00324 Amino acid permease NV385_01010 PF00155 Aminotransferase class I and II NV385_01010 PF00392 Bacterial regulatory proteins, gntR family NV385_01015 PF00202 Aminotransferase class-III NV385_01020 PF00171 Aldehyde dehydrogenase family NV385_01025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_01030 PF00857 Isochorismatase family NV385_01035 PF02678 Pirin NV385_01035 PF05726 Pirin C-terminal cupin domain NV385_01040 PF01593 Flavin containing amine oxidoreductase NV385_01060 PF07690 Major Facilitator Superfamily NV385_01065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_01065 PF03466 LysR substrate binding domain NV385_01085 PF00248 Aldo/keto reductase family NV385_01090 PF02311 AraC-like ligand binding domain NV385_01090 PF12833 Helix-turn-helix domain NV385_01120 PF01638 HxlR-like helix-turn-helix NV385_01125 PF02525 Flavodoxin-like fold NV385_01145 PF02705 K+ potassium transporter NV385_01170 PF00230 Major intrinsic protein NV385_01185 PF00977 Histidine biosynthesis protein NV385_01190 PF01636 Phosphotransferase enzyme family NV385_01205 PF03992 Antibiotic biosynthesis monooxygenase NV385_01220 PF00977 Histidine biosynthesis protein NV385_01235 PF00117 Glutamine amidotransferase class-I NV385_01240 PF00475 Imidazoleglycerol-phosphate dehydratase NV385_01260 PF00583 Acetyltransferase (GNAT) family NV385_01265 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NV385_01265 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NV385_01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_01275 PF00672 HAMP domain NV385_01275 PF00512 His Kinase A (phospho-acceptor) domain NV385_01280 PF00072 Response regulator receiver domain NV385_01280 PF00486 Transcriptional regulatory protein, C terminal NV385_01285 PF00575 S1 RNA binding domain NV385_01285 PF09371 Tex-like protein N-terminal domain NV385_01285 PF17674 HHH domain NV385_01285 PF16921 Tex protein YqgF-like domain NV385_01290 PF01740 STAS domain NV385_01290 PF00916 Sulfate permease family NV385_01295 PF00106 short chain dehydrogenase NV385_01300 PF01053 Cys/Met metabolism PLP-dependent enzyme NV385_01305 PF00005 ABC transporter NV385_01305 PF12848 ABC transporter NV385_01330 PF04191 Phospholipid methyltransferase NV385_01350 PF00529 HlyD membrane-fusion protein of T1SS NV385_01350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NV385_01355 PF00873 AcrB/AcrD/AcrF family NV385_01360 PF01545 Cation efflux family NV385_01390 PF00324 Amino acid permease NV385_01405 PF00749 tRNA synthetases class I (E and Q), catalytic domain NV385_01420 PF01795 MraW methylase family NV385_01430 PF00905 Penicillin binding protein transpeptidase domain NV385_01430 PF03717 Penicillin-binding Protein dimerisation domain NV385_01435 PF08245 Mur ligase middle domain NV385_01435 PF02875 Mur ligase family, glutamate ligase domain NV385_01435 PF01225 Mur ligase family, catalytic domain NV385_01440 PF08245 Mur ligase middle domain NV385_01440 PF02875 Mur ligase family, glutamate ligase domain NV385_01440 PF01225 Mur ligase family, catalytic domain NV385_01445 PF00953 Glycosyl transferase family 4 NV385_01455 PF13847 Methyltransferase domain NV385_01460 PF00905 Penicillin binding protein transpeptidase domain NV385_01460 PF00912 Transglycosylase NV385_01460 PF17092 Penicillin-binding protein OB-like domain NV385_01465 PF11104 Type IV pilus assembly protein PilM; NV385_01470 PF05137 Fimbrial assembly protein (PilN) NV385_01475 PF04350 Pilus assembly protein, PilO NV385_01485 PF11741 AMIN domain NV385_01485 PF00263 Bacterial type II and III secretion system protein NV385_01485 PF03958 Bacterial type II/III secretion system short domain NV385_01485 PF07660 Secretin and TonB N terminus short domain NV385_01490 PF01202 Shikimate kinase NV385_01495 PF01761 3-dehydroquinate synthase NV385_01505 PF01493 GXGXG motif NV385_01505 PF00310 Glutamine amidotransferases class-II NV385_01505 PF04898 Glutamate synthase central domain NV385_01505 PF01645 Conserved region in glutamate synthase NV385_01510 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NV385_01510 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_01520 PF04011 LemA family NV385_01525 PF04536 TPM domain NV385_01535 PF07963 Prokaryotic N-terminal methylation motif NV385_01535 PF00114 Pilin (bacterial filament) NV385_01545 PF15864 Protein glycosylation ligase NV385_01545 PF04932 O-Antigen ligase NV385_01545 PF11846 Virulence factor membrane-bound polymerase, C-terminal NV385_01555 PF00210 Ferritin-like domain NV385_01560 PF04324 BFD-like [2Fe-2S] binding domain NV385_01565 PF01042 Endoribonuclease L-PSP NV385_01570 PF13291 ACT domain NV385_01570 PF04607 Region found in RelA / SpoT proteins NV385_01570 PF02824 TGS domain NV385_01580 PF01192 RNA polymerase Rpb6 NV385_01585 PF00625 Guanylate kinase NV385_01590 PF02401 LytB protein NV385_01630 PF00886 Ribosomal protein S16 NV385_01635 PF01782 RimM N-terminal domain NV385_01635 PF05239 PRC-barrel domain NV385_01640 PF01746 tRNA (Guanine-1)-methyltransferase NV385_01645 PF01245 Ribosomal protein L19 NV385_01650 PF00561 alpha/beta hydrolase fold NV385_01655 PF03280 Proteobacterial lipase chaperone protein NV385_01660 PF01509 TruB family pseudouridylate synthase (N terminal domain) NV385_01660 PF16198 tRNA pseudouridylate synthase B C-terminal domain NV385_01660 PF09157 Pseudouridine synthase II TruB, C-terminal NV385_01665 PF01925 Sulfite exporter TauE/SafE NV385_01675 PF00892 EamA-like transporter family NV385_01680 PF00892 EamA-like transporter family NV385_01685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NV385_01685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NV385_01690 PF02913 FAD linked oxidases, C-terminal domain NV385_01690 PF01565 FAD binding domain NV385_01700 PF03992 Antibiotic biosynthesis monooxygenase NV385_01705 PF02525 Flavodoxin-like fold NV385_01715 PF07690 Major Facilitator Superfamily NV385_01720 PF12805 FUSC-like inner membrane protein yccS NV385_01725 PF00080 Copper/zinc superoxide dismutase (SODC) NV385_01730 PF01594 AI-2E family transporter NV385_01735 PF13614 AAA domain NV385_01765 PF00324 Amino acid permease NV385_01770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NV385_01770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NV385_01775 PF00202 Aminotransferase class-III NV385_01780 PF04958 Arginine N-succinyltransferase beta subunit NV385_01785 PF00171 Aldehyde dehydrogenase family NV385_01790 PF04996 Succinylarginine dihydrolase NV385_01795 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NV385_01810 PF05922 Peptidase inhibitor I9 NV385_01810 PF00082 Subtilase family NV385_01825 PF03466 LysR substrate binding domain NV385_01825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_01830 PF00892 EamA-like transporter family NV385_01840 PF02092 Glycyl-tRNA synthetase beta subunit NV385_01840 PF05746 DALR anticodon binding domain NV385_01845 PF02091 Glycyl-tRNA synthetase alpha subunit NV385_01870 PF00571 CBS domain NV385_01875 PF04024 PspC domain NV385_01885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_01885 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_01885 PF12806 Acetyl-CoA dehydrogenase C-terminal like NV385_01885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_01895 PF08501 Shikimate dehydrogenase substrate binding domain NV385_01895 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NV385_01895 PF01488 Shikimate / quinate 5-dehydrogenase NV385_01900 PF01218 Coproporphyrinogen III oxidase NV385_01905 PF00925 GTP cyclohydrolase II NV385_01910 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NV385_01910 PF02779 Transketolase, pyrimidine binding domain NV385_01910 PF02780 Transketolase, C-terminal domain NV385_01915 PF00459 Inositol monophosphatase family NV385_01920 PF00271 Helicase conserved C-terminal domain NV385_01920 PF03880 DbpA RNA binding domain NV385_01920 PF00270 DEAD/DEAH box helicase NV385_01920 PF12343 Cold shock protein DEAD box A NV385_01930 PF00005 ABC transporter NV385_01935 PF02405 Permease MlaE NV385_01945 PF05494 MlaC protein NV385_01955 PF01544 CorA-like Mg2+ transporter protein NV385_01960 PF03641 Possible lysine decarboxylase NV385_01965 PF00293 NUDIX domain NV385_01970 PF00156 Phosphoribosyl transferase domain NV385_01975 PF00270 DEAD/DEAH box helicase NV385_01975 PF00271 Helicase conserved C-terminal domain NV385_01975 PF17191 RecG wedge domain NV385_01990 PF01553 Acyltransferase NV385_02000 PF00375 Sodium:dicarboxylate symporter family NV385_02010 PF01926 50S ribosome-binding GTPase NV385_02015 PF02082 Transcriptional regulator NV385_02020 PF00042 Globin NV385_02020 PF00970 Oxidoreductase FAD-binding domain NV385_02020 PF00175 Oxidoreductase NAD-binding domain NV385_02025 PF05872 Bacterial protein of unknown function (DUF853) NV385_02030 PF01053 Cys/Met metabolism PLP-dependent enzyme NV385_02035 PF00117 Glutamine amidotransferase class-I NV385_02040 PF00338 Ribosomal protein S10p/S20e NV385_02045 PF00297 Ribosomal protein L3 NV385_02050 PF00573 Ribosomal protein L4/L1 family NV385_02055 PF00276 Ribosomal protein L23 NV385_02060 PF03947 Ribosomal Proteins L2, C-terminal domain NV385_02060 PF00181 Ribosomal Proteins L2, RNA binding domain NV385_02065 PF00203 Ribosomal protein S19 NV385_02070 PF00237 Ribosomal protein L22p/L17e NV385_02080 PF00252 Ribosomal protein L16p/L10e NV385_02085 PF00831 Ribosomal L29 protein NV385_02090 PF00366 Ribosomal protein S17 NV385_02095 PF00238 Ribosomal protein L14p/L23e NV385_02100 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NV385_02100 PF00467 KOW motif NV385_02105 PF00281 Ribosomal protein L5 NV385_02105 PF00673 ribosomal L5P family C-terminus NV385_02110 PF00253 Ribosomal protein S14p/S29e NV385_02115 PF00410 Ribosomal protein S8 NV385_02120 PF00347 Ribosomal protein L6 NV385_02125 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NV385_02130 PF00333 Ribosomal protein S5, N-terminal domain NV385_02130 PF03719 Ribosomal protein S5, C-terminal domain NV385_02135 PF00327 Ribosomal protein L30p/L7e NV385_02140 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NV385_02145 PF00344 SecY translocase NV385_02150 PF00444 Ribosomal protein L36 NV385_02155 PF00416 Ribosomal protein S13/S18 NV385_02160 PF00411 Ribosomal protein S11 NV385_02165 PF00163 Ribosomal protein S4/S9 N-terminal domain NV385_02165 PF01479 S4 domain NV385_02170 PF01000 RNA polymerase Rpb3/RpoA insert domain NV385_02170 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NV385_02170 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NV385_02175 PF01196 Ribosomal protein L17 NV385_02180 PF00743 Flavin-binding monooxygenase-like NV385_02185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_02185 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_02185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_02190 PF03937 Flavinator of succinate dehydrogenase NV385_02220 PF09526 Probable metal-binding protein (DUF2387) NV385_02225 PF01432 Peptidase family M3 NV385_02230 PF08206 Ribonuclease B OB domain NV385_02230 PF00575 S1 RNA binding domain NV385_02230 PF00773 RNB domain NV385_02230 PF08461 Ribonuclease R winged-helix domain NV385_02230 PF17876 Cold shock domain NV385_02275 PF01557 Fumarylacetoacetate (FAA) hydrolase family NV385_02280 PF12833 Helix-turn-helix domain NV385_02285 PF00892 EamA-like transporter family NV385_02290 PF03631 Virulence factor BrkB NV385_02295 PF03358 NADPH-dependent FMN reductase NV385_02320 PF02130 Uncharacterized protein family UPF0054 NV385_02325 PF02562 PhoH-like protein NV385_02330 PF04055 Radical SAM superfamily NV385_02330 PF01938 TRAM domain NV385_02330 PF00919 Uncharacterized protein family UPF0004 NV385_02335 PF10145 Phage-related minor tail protein NV385_02335 PF01551 Peptidase family M23 NV385_02335 PF01464 Transglycosylase SLT domain NV385_02345 PF00056 lactate/malate dehydrogenase, NAD binding domain NV385_02345 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NV385_02365 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NV385_02370 PF01066 CDP-alcohol phosphatidyltransferase NV385_02415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_02415 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_02415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_02420 PF00440 Bacterial regulatory proteins, tetR family NV385_02420 PF17932 Tetracyclin repressor-like, C-terminal domain NV385_02435 PF01039 Carboxyl transferase domain NV385_02440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_02440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_02440 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_02450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NV385_02450 PF00364 Biotin-requiring enzyme NV385_02450 PF00289 Biotin carboxylase, N-terminal domain NV385_02450 PF02785 Biotin carboxylase C-terminal domain NV385_02460 PF04386 Stringent starvation protein B NV385_02465 PF00043 Glutathione S-transferase, C-terminal domain NV385_02465 PF13417 Glutathione S-transferase, N-terminal domain NV385_02470 PF00380 Ribosomal protein S9/S16 NV385_02475 PF00572 Ribosomal protein L13 NV385_02480 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NV385_02485 PF00398 Ribosomal RNA adenine dimethylase NV385_02490 PF00149 Calcineurin-like phosphoesterase NV385_02510 PF13167 GTP-binding GTPase N-terminal NV385_02510 PF16360 GTP-binding GTPase Middle Region NV385_02510 PF01926 50S ribosome-binding GTPase NV385_02520 PF13091 PLD-like domain NV385_02525 PF00149 Calcineurin-like phosphoesterase NV385_02525 PF10518 TAT (twin-arginine translocation) pathway signal sequence NV385_02530 PF00691 OmpA family NV385_02530 PF01389 OmpA-like transmembrane domain NV385_02535 PF00990 Diguanylate cyclase, GGDEF domain NV385_02535 PF17152 Periplasmic sensor domain NV385_02570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NV385_02570 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_02580 PF00753 Metallo-beta-lactamase superfamily NV385_02580 PF04273 Putative phosphatase (DUF442) NV385_02585 PF00561 alpha/beta hydrolase fold NV385_02590 PF00085 Thioredoxin NV385_02595 PF03061 Thioesterase superfamily NV385_02605 PF04461 Protein of unknown function (DUF520) NV385_02615 PF01266 FAD dependent oxidoreductase NV385_02615 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NV385_02625 PF03795 YCII-related domain NV385_02630 PF04279 Intracellular septation protein A NV385_02635 PF02811 PHP domain NV385_02640 PF01062 Bestrophin, RFP-TM, chloride channel NV385_02645 PF04002 RadC-like JAB domain NV385_02650 PF02441 Flavoprotein NV385_02650 PF04127 DNA / pantothenate metabolism flavoprotein NV385_02655 PF02355 Protein export membrane protein NV385_02655 PF07549 SecD/SecF GG Motif NV385_02660 PF02355 Protein export membrane protein NV385_02660 PF13721 SecD export protein N-terminal TM region NV385_02660 PF07549 SecD/SecF GG Motif NV385_02665 PF02699 Preprotein translocase subunit NV385_02670 PF01702 Queuine tRNA-ribosyltransferase NV385_02685 PF02547 Queuosine biosynthesis protein NV385_02695 PF00512 His Kinase A (phospho-acceptor) domain NV385_02695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_02695 PF07689 KaiB domain NV385_02700 PF08335 GlnD PII-uridylyltransferase NV385_02700 PF03710 Glutamate-ammonia ligase adenylyltransferase NV385_02705 PF01063 Amino-transferase class IV NV385_02720 PF01522 Polysaccharide deacetylase NV385_02725 PF00535 Glycosyl transferase family 2 NV385_02730 PF13439 Glycosyltransferase Family 4 NV385_02730 PF00534 Glycosyl transferases group 1 NV385_02755 PF17102 Stealth protein CR3, conserved region 3 NV385_02755 PF17101 Stealth protein CR1, conserved region 1 NV385_02755 PF11380 Stealth protein CR2, conserved region 2 NV385_02760 PF01336 OB-fold nucleic acid binding domain NV385_02760 PF00152 tRNA synthetases class II (D, K and N) NV385_02760 PF02938 GAD domain NV385_02770 PF07715 TonB-dependent Receptor Plug Domain NV385_02770 PF00593 TonB dependent receptor NV385_02790 PF06146 Phosphate-starvation-inducible E NV385_02795 PF02798 Glutathione S-transferase, N-terminal domain NV385_02795 PF00043 Glutathione S-transferase, C-terminal domain NV385_02800 PF03466 LysR substrate binding domain NV385_02800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_02805 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_02805 PF12806 Acetyl-CoA dehydrogenase C-terminal like NV385_02805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_02805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_02810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_02810 PF12806 Acetyl-CoA dehydrogenase C-terminal like NV385_02810 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_02810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_02820 PF00672 HAMP domain NV385_02820 PF00512 His Kinase A (phospho-acceptor) domain NV385_02820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_02825 PF00486 Transcriptional regulatory protein, C terminal NV385_02825 PF00072 Response regulator receiver domain NV385_02830 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NV385_02850 PF01923 Cobalamin adenosyltransferase NV385_02855 PF07715 TonB-dependent Receptor Plug Domain NV385_02855 PF00593 TonB dependent receptor NV385_02860 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NV385_02865 PF00291 Pyridoxal-phosphate dependent enzyme NV385_02890 PF00290 Tryptophan synthase alpha chain NV385_02895 PF01039 Carboxyl transferase domain NV385_02900 PF08245 Mur ligase middle domain NV385_02900 PF02875 Mur ligase family, glutamate ligase domain NV385_02915 PF00753 Metallo-beta-lactamase superfamily NV385_02920 PF00578 AhpC/TSA family NV385_02920 PF10417 C-terminal domain of 1-Cys peroxiredoxin NV385_02925 PF02810 SEC-C motif NV385_02925 PF01043 SecA preprotein cross-linking domain NV385_02925 PF07516 SecA Wing and Scaffold domain NV385_02925 PF07517 SecA DEAD-like domain NV385_02935 PF00083 Sugar (and other) transporter NV385_02935 PF07690 Major Facilitator Superfamily NV385_02940 PF03006 Haemolysin-III related NV385_02965 PF00378 Enoyl-CoA hydratase/isomerase NV385_02965 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NV385_02965 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NV385_02970 PF02803 Thiolase, C-terminal domain NV385_02970 PF00108 Thiolase, N-terminal domain NV385_02975 PF12833 Helix-turn-helix domain NV385_02975 PF02311 AraC-like ligand binding domain NV385_02980 PF02515 CoA-transferase family III NV385_02985 PF04966 Carbohydrate-selective porin, OprB family NV385_02990 PF01011 PQQ enzyme repeat NV385_02995 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NV385_02995 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NV385_03005 PF00893 Small Multidrug Resistance protein NV385_03015 PF02803 Thiolase, C-terminal domain NV385_03015 PF00108 Thiolase, N-terminal domain NV385_03025 PF00691 OmpA family NV385_03025 PF13505 Outer membrane protein beta-barrel domain NV385_03035 PF01139 tRNA-splicing ligase RtcB NV385_03040 PF00324 Amino acid permease NV385_03045 PF05175 Methyltransferase small domain NV385_03045 PF08468 Methyltransferase small domain N-terminal NV385_03050 PF00860 Permease family NV385_03055 PF00679 Elongation factor G C-terminus NV385_03055 PF00009 Elongation factor Tu GTP binding domain NV385_03055 PF03144 Elongation factor Tu domain 2 NV385_03060 PF01741 Large-conductance mechanosensitive channel, MscL NV385_03075 PF06827 Zinc finger found in FPG and IleRS NV385_03075 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NV385_03075 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NV385_03080 PF02245 Methylpurine-DNA glycosylase (MPG) NV385_03100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NV385_03115 PF10411 Disulfide bond isomerase protein N-terminus NV385_03115 PF13098 Thioredoxin-like domain NV385_03120 PF01571 Aminomethyltransferase folate-binding domain NV385_03130 PF04343 Protein of unknown function, DUF488 NV385_03135 PF03831 PhnA domain NV385_03135 PF08274 PhnA Zinc-Ribbon NV385_03140 PF07411 Domain of unknown function (DUF1508) NV385_03145 PF03129 Anticodon binding domain NV385_03145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NV385_03145 PF04073 Aminoacyl-tRNA editing domain NV385_03150 PF00873 AcrB/AcrD/AcrF family NV385_03170 PF00072 Response regulator receiver domain NV385_03175 PF00072 Response regulator receiver domain NV385_03180 PF01584 CheW-like domain NV385_03185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NV385_03185 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NV385_03190 PF01584 CheW-like domain NV385_03190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_03190 PF01627 Hpt domain NV385_03190 PF00072 Response regulator receiver domain NV385_03200 PF01546 Peptidase family M20/M25/M40 NV385_03200 PF07687 Peptidase dimerisation domain NV385_03205 PF08085 Entericidin EcnA/B family NV385_03215 PF04304 Protein of unknown function (DUF454) NV385_03220 PF03734 L,D-transpeptidase catalytic domain NV385_03220 PF17969 L,D-transpeptidase C-terminal domain NV385_03260 PF00667 FAD binding domain NV385_03260 PF00258 Flavodoxin NV385_03260 PF00175 Oxidoreductase NAD-binding domain NV385_03270 PF12805 FUSC-like inner membrane protein yccS NV385_03275 PF07690 Major Facilitator Superfamily NV385_03280 PF00881 Nitroreductase family NV385_03295 PF01235 Sodium:alanine symporter family NV385_03300 PF01734 Patatin-like phospholipase NV385_03305 PF13291 ACT domain NV385_03305 PF00291 Pyridoxal-phosphate dependent enzyme NV385_03310 PF05992 SbmA/BacA-like family NV385_03340 PF02934 GatB/GatE catalytic domain NV385_03340 PF02637 GatB domain NV385_03345 PF01425 Amidase NV385_03350 PF02686 Glu-tRNAGln amidotransferase C subunit NV385_03360 PF04085 rod shape-determining protein MreC NV385_03365 PF04093 rod shape-determining protein MreD NV385_03370 PF02545 Maf-like protein NV385_03375 PF10150 Ribonuclease E/G family NV385_03375 PF00575 S1 RNA binding domain NV385_03385 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NV385_03385 PF06974 Protein of unknown function (DUF1298) NV385_03390 PF01507 Phosphoadenosine phosphosulfate reductase family NV385_03405 PF02525 Flavodoxin-like fold NV385_03425 PF02673 Bacitracin resistance protein BacA NV385_03430 PF06719 AraC-type transcriptional regulator N-terminus NV385_03430 PF12833 Helix-turn-helix domain NV385_03435 PF08240 Alcohol dehydrogenase GroES-like domain NV385_03435 PF08990 Erythronolide synthase docking NV385_03435 PF14765 Polyketide synthase dehydratase NV385_03435 PF00550 Phosphopantetheine attachment site NV385_03435 PF08659 KR domain NV385_03435 PF00698 Acyl transferase domain NV385_03435 PF00109 Beta-ketoacyl synthase, N-terminal domain NV385_03435 PF16197 Ketoacyl-synthetase C-terminal extension NV385_03435 PF09277 Erythronolide synthase, docking NV385_03435 PF02801 Beta-ketoacyl synthase, C-terminal domain NV385_03440 PF01965 DJ-1/PfpI family NV385_03450 PF00324 Amino acid permease NV385_03455 PF04303 PrpF protein NV385_03460 PF00348 Polyprenyl synthetase NV385_03465 PF04237 YjbR NV385_03470 PF01145 SPFH domain / Band 7 family NV385_03480 PF01734 Patatin-like phospholipase NV385_03500 PF00884 Sulfatase NV385_03500 PF08019 Phosphoethanolamine transferase EptA/EptB NV385_03505 PF00072 Response regulator receiver domain NV385_03505 PF00486 Transcriptional regulatory protein, C terminal NV385_03510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_03510 PF00512 His Kinase A (phospho-acceptor) domain NV385_03510 PF08521 Two-component sensor kinase N-terminal NV385_03520 PF00909 Ammonium Transporter Family NV385_03525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_03525 PF03466 LysR substrate binding domain NV385_03545 PF08264 Anticodon-binding domain of tRNA NV385_03545 PF00133 tRNA synthetases class I (I, L, M and V) NV385_03545 PF10458 Valyl tRNA synthetase tRNA binding arm NV385_03565 PF01906 Putative heavy-metal-binding NV385_03570 PF01906 Putative heavy-metal-binding NV385_03575 PF02321 Outer membrane efflux protein NV385_03580 PF00873 AcrB/AcrD/AcrF family NV385_03585 PF00529 HlyD membrane-fusion protein of T1SS NV385_03585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NV385_03590 PF01569 PAP2 superfamily NV385_03600 PF00348 Polyprenyl synthetase NV385_03610 PF00829 Ribosomal prokaryotic L21 protein NV385_03615 PF01016 Ribosomal L27 protein NV385_03620 PF03548 Outer membrane lipoprotein carrier protein LolA NV385_03630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NV385_03630 PF02403 Seryl-tRNA synthetase N-terminal domain NV385_03635 PF14824 Sirohaem biosynthesis protein central NV385_03635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NV385_03635 PF10414 Sirohaem synthase dimerisation region NV385_03640 PF00588 SpoU rRNA Methylase family NV385_03645 PF01638 HxlR-like helix-turn-helix NV385_03650 PF03358 NADPH-dependent FMN reductase NV385_03655 PF13520 Amino acid permease NV385_03660 PF00465 Iron-containing alcohol dehydrogenase NV385_03670 PF03099 Biotin/lipoate A/B protein ligase family NV385_03675 PF04359 Protein of unknown function (DUF493) NV385_03680 PF04546 Sigma-70, non-essential region NV385_03680 PF00140 Sigma-70 factor, region 1.2 NV385_03680 PF04542 Sigma-70 region 2 NV385_03680 PF04539 Sigma-70 region 3 NV385_03680 PF04545 Sigma-70, region 4 NV385_03680 PF03979 Sigma-70 factor, region 1.1 NV385_03700 PF00581 Rhodanese-like domain NV385_03700 PF17773 UPF0176 acylphosphatase like domain NV385_03710 PF00285 Citrate synthase, C-terminal domain NV385_03715 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NV385_03720 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NV385_03725 PF00890 FAD binding domain NV385_03725 PF02910 Fumarate reductase flavoprotein C-term NV385_03730 PF13085 2Fe-2S iron-sulfur cluster binding domain NV385_03745 PF00676 Dehydrogenase E1 component NV385_03745 PF16078 2-oxoglutarate dehydrogenase N-terminus NV385_03745 PF02779 Transketolase, pyrimidine binding domain NV385_03745 PF16870 2-oxoglutarate dehydrogenase C-terminal NV385_03750 PF02817 e3 binding domain NV385_03750 PF00364 Biotin-requiring enzyme NV385_03750 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NV385_03755 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_03755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NV385_03760 PF08442 ATP-grasp domain NV385_03760 PF00549 CoA-ligase NV385_03765 PF02629 CoA binding domain NV385_03765 PF00549 CoA-ligase NV385_03770 PF00579 tRNA synthetases class I (W and Y) NV385_03775 PF05661 Protein of unknown function (DUF808) NV385_03780 PF04228 Putative neutral zinc metallopeptidase NV385_03785 PF00999 Sodium/hydrogen exchanger family NV385_03800 PF09587 Bacterial capsule synthesis protein PGA_cap NV385_03810 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NV385_03815 PF00582 Universal stress protein family NV385_03820 PF00132 Bacterial transferase hexapeptide (six repeats) NV385_03825 PF03449 Transcription elongation factor, N-terminal NV385_03825 PF01272 Transcription elongation factor, GreA/GreB, C-term NV385_03830 PF02142 MGS-like domain NV385_03830 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NV385_03830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NV385_03835 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NV385_03835 PF00117 Glutamine amidotransferase class-I NV385_03850 PF01985 CRS1 / YhbY (CRM) domain NV385_03855 PF01728 FtsJ-like methyltransferase NV385_03860 PF00004 ATPase family associated with various cellular activities (AAA) NV385_03860 PF17862 AAA+ lid domain NV385_03860 PF06480 FtsH Extracellular NV385_03860 PF01434 Peptidase family M41 NV385_03865 PF00809 Pterin binding enzyme NV385_03885 PF09423 PhoD-like phosphatase NV385_03885 PF16655 PhoD-like phosphatase, N-terminal domain NV385_03900 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NV385_03900 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NV385_03915 PF00083 Sugar (and other) transporter NV385_03920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NV385_03920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NV385_03925 PF01266 FAD dependent oxidoreductase NV385_03925 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NV385_03930 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NV385_03930 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NV385_03935 PF00781 Diacylglycerol kinase catalytic domain NV385_03940 PF00149 Calcineurin-like phosphoesterase NV385_03950 PF00166 Chaperonin 10 Kd subunit NV385_03955 PF00118 TCP-1/cpn60 chaperonin family NV385_03960 PF01219 Prokaryotic diacylglycerol kinase NV385_03970 PF03009 Glycerophosphoryl diester phosphodiesterase family NV385_03975 PF00873 AcrB/AcrD/AcrF family NV385_03985 PF01435 Peptidase family M48 NV385_03990 PF01464 Transglycosylase SLT domain NV385_03995 PF01171 PP-loop family NV385_04005 PF00497 Bacterial extracellular solute-binding proteins, family 3 NV385_04005 PF01464 Transglycosylase SLT domain NV385_04010 PF03449 Transcription elongation factor, N-terminal NV385_04010 PF01272 Transcription elongation factor, GreA/GreB, C-term NV385_04025 PF00501 AMP-binding enzyme NV385_04025 PF13193 AMP-binding enzyme C-terminal domain NV385_04025 PF00668 Condensation domain NV385_04025 PF00550 Phosphopantetheine attachment site NV385_04025 PF00975 Thioesterase domain NV385_04055 PF00881 Nitroreductase family NV385_04070 PF02595 Glycerate kinase family NV385_04075 PF00384 Molybdopterin oxidoreductase NV385_04080 PF02634 FdhD/NarQ family NV385_04085 PF06803 Protein of unknown function (DUF1232) NV385_04090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NV385_04090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NV385_04090 PF11890 Domain of unknown function (DUF3410) NV385_04095 PF00152 tRNA synthetases class II (D, K and N) NV385_04105 PF18073 Rubredoxin metal binding domain NV385_04110 PF00324 Amino acid permease NV385_04120 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NV385_04120 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NV385_04125 PF01678 Diaminopimelate epimerase NV385_04130 PF01810 LysE type translocator NV385_04135 PF00589 Phage integrase family NV385_04135 PF02899 Phage integrase, N-terminal SAM-like domain NV385_04140 PF01012 Electron transfer flavoprotein domain NV385_04145 PF00766 Electron transfer flavoprotein FAD-binding domain NV385_04145 PF01012 Electron transfer flavoprotein domain NV385_04150 PF00521 DNA gyrase/topoisomerase IV, subunit A NV385_04150 PF03989 DNA gyrase C-terminal domain, beta-propeller NV385_04165 PF00535 Glycosyl transferase family 2 NV385_04185 PF13533 Biotin-lipoyl like NV385_04195 PF00266 Aminotransferase class-V NV385_04210 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NV385_04220 PF12704 MacB-like periplasmic core domain NV385_04220 PF02687 FtsX-like permease family NV385_04225 PF00005 ABC transporter NV385_04230 PF03772 Competence protein NV385_04230 PF13567 Domain of unknown function (DUF4131) NV385_04230 PF00753 Metallo-beta-lactamase superfamily NV385_04240 PF06965 Na+/H+ antiporter 1 NV385_04240 PF01343 Peptidase family S49 NV385_04245 PF12697 Alpha/beta hydrolase family NV385_04250 PF00551 Formyl transferase NV385_04255 PF00586 AIR synthase related protein, N-terminal domain NV385_04255 PF02769 AIR synthase related protein, C-terminal domain NV385_04260 PF01594 AI-2E family transporter NV385_04265 PF11638 DnaA N-terminal domain NV385_04265 PF08299 Bacterial dnaA protein helix-turn-helix NV385_04265 PF00308 Bacterial dnaA protein NV385_04295 PF08032 RNA 2'-O ribose methyltransferase substrate binding NV385_04295 PF00588 SpoU rRNA Methylase family NV385_04300 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NV385_04310 PF00691 OmpA family NV385_04315 PF07676 WD40-like Beta Propeller Repeat NV385_04315 PF04052 TolB amino-terminal domain NV385_04325 PF02472 Biopolymer transport protein ExbD/TolR NV385_04330 PF01618 MotA/TolQ/ExbB proton channel family NV385_04335 PF03061 Thioesterase superfamily NV385_04340 PF01546 Peptidase family M20/M25/M40 NV385_04340 PF07687 Peptidase dimerisation domain NV385_04345 PF05496 Holliday junction DNA helicase RuvB P-loop domain NV385_04345 PF17864 RuvB AAA lid domain NV385_04345 PF05491 RuvB C-terminal winged helix domain NV385_04350 PF07499 RuvA, C-terminal domain NV385_04350 PF01330 RuvA N terminal domain NV385_04355 PF01966 HD domain NV385_04360 PF02769 AIR synthase related protein, C-terminal domain NV385_04360 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NV385_04360 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NV385_04365 PF07690 Major Facilitator Superfamily NV385_04375 PF01784 NIF3 (NGG1p interacting factor 3) NV385_04380 PF00378 Enoyl-CoA hydratase/isomerase NV385_04385 PF00293 NUDIX domain NV385_04385 PF01467 Cytidylyltransferase-like NV385_04395 PF00578 AhpC/TSA family NV385_04410 PF06508 Queuosine biosynthesis protein QueC NV385_04420 PF00132 Bacterial transferase hexapeptide (six repeats) NV385_04420 PF14602 Hexapeptide repeat of succinyl-transferase NV385_04420 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NV385_04430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_04430 PF03466 LysR substrate binding domain NV385_04435 PF00005 ABC transporter NV385_04435 PF12857 TOBE-like domain NV385_04440 PF00528 Binding-protein-dependent transport system inner membrane component NV385_04445 PF00528 Binding-protein-dependent transport system inner membrane component NV385_04460 PF01063 Amino-transferase class IV NV385_04465 PF02618 YceG-like family NV385_04470 PF02223 Thymidylate kinase NV385_04480 PF02910 Fumarate reductase flavoprotein C-term NV385_04480 PF00890 FAD binding domain NV385_04485 PF13180 PDZ domain NV385_04495 PF06421 GTP-binding protein LepA C-terminus NV385_04495 PF03144 Elongation factor Tu domain 2 NV385_04495 PF00009 Elongation factor Tu GTP binding domain NV385_04495 PF00679 Elongation factor G C-terminus NV385_04500 PF10502 Signal peptidase, peptidase S26 NV385_04510 PF00035 Double-stranded RNA binding motif NV385_04510 PF14622 Ribonuclease-III-like NV385_04515 PF07650 KH domain NV385_04515 PF01926 50S ribosome-binding GTPase NV385_04525 PF02565 Recombination protein O C terminal NV385_04525 PF11967 Recombination protein O N terminal NV385_04530 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NV385_04535 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NV385_04540 PF00106 short chain dehydrogenase NV385_04570 PF00155 Aminotransferase class I and II NV385_04580 PF17151 Periplasmic sensor domain NV385_04580 PF00990 Diguanylate cyclase, GGDEF domain NV385_04590 PF02151 UvrB/uvrC motif NV385_04590 PF04851 Type III restriction enzyme, res subunit NV385_04590 PF17757 UvrB interaction domain NV385_04590 PF00271 Helicase conserved C-terminal domain NV385_04590 PF12344 Ultra-violet resistance protein B NV385_04600 PF00892 EamA-like transporter family NV385_04605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NV385_04605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NV385_04620 PF01018 GTP1/OBG NV385_04620 PF01926 50S ribosome-binding GTPase NV385_04625 PF00696 Amino acid kinase family NV385_04625 PF01472 PUA domain NV385_04635 PF07759 Protein of unknown function (DUF1615) NV385_04640 PF01207 Dihydrouridine synthase (Dus) NV385_04645 PF03060 Nitronate monooxygenase NV385_04660 PF02350 UDP-N-acetylglucosamine 2-epimerase NV385_04690 PF03441 FAD binding domain of DNA photolyase NV385_04690 PF00875 DNA photolyase NV385_04695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NV385_04700 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_04705 PF07943 Penicillin-binding protein 5, C-terminal domain NV385_04705 PF00768 D-alanyl-D-alanine carboxypeptidase NV385_04715 PF03971 Monomeric isocitrate dehydrogenase NV385_04720 PF00849 RNA pseudouridylate synthase NV385_04725 PF00180 Isocitrate/isopropylmalate dehydrogenase NV385_04745 PF06779 Uncharacterised MFS-type transporter YbfB NV385_04750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_04750 PF03466 LysR substrate binding domain NV385_04755 PF00375 Sodium:dicarboxylate symporter family NV385_04760 PF02567 Phenazine biosynthesis-like protein NV385_04765 PF05193 Peptidase M16 inactive domain NV385_04765 PF00675 Insulinase (Peptidase family M16) NV385_04790 PF02581 Thiamine monophosphate synthase NV385_04795 PF00202 Aminotransferase class-III NV385_04805 PF00849 RNA pseudouridylate synthase NV385_04810 PF00271 Helicase conserved C-terminal domain NV385_04810 PF12137 RNA polymerase recycling family C-terminal NV385_04810 PF00176 SNF2 family N-terminal domain NV385_04810 PF18339 RapA N-terminal Tudor like domain 1 NV385_04810 PF18337 RapA N-terminal Tudor like domain NV385_04820 PF00440 Bacterial regulatory proteins, tetR family NV385_04825 PF00175 Oxidoreductase NAD-binding domain NV385_04825 PF00970 Oxidoreductase FAD-binding domain NV385_04825 PF00111 2Fe-2S iron-sulfur cluster binding domain NV385_04830 PF00487 Fatty acid desaturase NV385_04840 PF17754 MftR C-terminal domain NV385_04840 PF00440 Bacterial regulatory proteins, tetR family NV385_04850 PF00202 Aminotransferase class-III NV385_04855 PF00282 Pyridoxal-dependent decarboxylase conserved domain NV385_04860 PF00171 Aldehyde dehydrogenase family NV385_04865 PF01037 Lrp/AsnC ligand binding domain NV385_04870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NV385_04870 PF00205 Thiamine pyrophosphate enzyme, central domain NV385_04870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NV385_04875 PF00324 Amino acid permease NV385_04880 PF12849 PBP superfamily domain NV385_04885 PF00528 Binding-protein-dependent transport system inner membrane component NV385_04890 PF00528 Binding-protein-dependent transport system inner membrane component NV385_04895 PF00005 ABC transporter NV385_04900 PF01343 Peptidase family S49 NV385_04900 PF08496 Peptidase family S49 N-terminal NV385_04915 PF08328 Adenylosuccinate lyase C-terminal NV385_04915 PF00206 Lyase NV385_04920 PF04356 Protein of unknown function (DUF489) NV385_04930 PF13344 Haloacid dehalogenase-like hydrolase NV385_04930 PF00293 NUDIX domain NV385_04935 PF00132 Bacterial transferase hexapeptide (six repeats) NV385_04940 PF07943 Penicillin-binding protein 5, C-terminal domain NV385_04940 PF00768 D-alanyl-D-alanine carboxypeptidase NV385_04955 PF01975 Survival protein SurE NV385_04960 PF01476 LysM domain NV385_04960 PF01551 Peptidase family M23 NV385_04965 PF03466 LysR substrate binding domain NV385_04965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_04970 PF13654 AAA domain NV385_04970 PF05362 Lon protease (S16) C-terminal proteolytic domain NV385_04975 PF07690 Major Facilitator Superfamily NV385_04980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NV385_04985 PF13593 SBF-like CPA transporter family (DUF4137) NV385_04990 PF01197 Ribosomal protein L31 NV385_05005 PF04055 Radical SAM superfamily NV385_05010 PF01132 Elongation factor P (EF-P) OB domain NV385_05010 PF08207 Elongation factor P (EF-P) KOW-like domain NV385_05010 PF09285 Elongation factor P, C-terminal NV385_05015 PF02554 Carbon starvation protein CstA NV385_05015 PF13722 5TM C-terminal transporter carbon starvation CstA NV385_05020 PF04328 Selenoprotein, putative NV385_05055 PF06018 CodY GAF-like domain NV385_05055 PF17853 GGDEF-like domain NV385_05055 PF13556 PucR C-terminal helix-turn-helix domain NV385_05070 PF00171 Aldehyde dehydrogenase family NV385_05075 PF00324 Amino acid permease NV385_05080 PF03466 LysR substrate binding domain NV385_05080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_05085 PF02028 BCCT, betaine/carnitine/choline family transporter NV385_05090 PF02028 BCCT, betaine/carnitine/choline family transporter NV385_05095 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NV385_05095 PF00355 Rieske [2Fe-2S] domain NV385_05100 PF00171 Aldehyde dehydrogenase family NV385_05110 PF18113 Rubredoxin binding C-terminal domain NV385_05110 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_05115 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NV385_05115 PF01266 FAD dependent oxidoreductase NV385_05135 PF00892 EamA-like transporter family NV385_05145 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NV385_05150 PF00083 Sugar (and other) transporter NV385_05155 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NV385_05155 PF13378 Enolase C-terminal domain-like NV385_05160 PF14765 Polyketide synthase dehydratase NV385_05160 PF00550 Phosphopantetheine attachment site NV385_05160 PF02801 Beta-ketoacyl synthase, C-terminal domain NV385_05160 PF00109 Beta-ketoacyl synthase, N-terminal domain NV385_05160 PF16197 Ketoacyl-synthetase C-terminal extension NV385_05160 PF09277 Erythronolide synthase, docking NV385_05160 PF08990 Erythronolide synthase docking NV385_05160 PF08240 Alcohol dehydrogenase GroES-like domain NV385_05160 PF08659 KR domain NV385_05160 PF00698 Acyl transferase domain NV385_05165 PF00440 Bacterial regulatory proteins, tetR family NV385_05185 PF02678 Pirin NV385_05185 PF17954 Quercetinase C-terminal cupin domain NV385_05195 PF08348 YheO-like PAS domain NV385_05195 PF13309 HTH domain NV385_05205 PF00501 AMP-binding enzyme NV385_05205 PF13193 AMP-binding enzyme C-terminal domain NV385_05205 PF00668 Condensation domain NV385_05205 PF00550 Phosphopantetheine attachment site NV385_05210 PF00975 Thioesterase domain NV385_05210 PF13193 AMP-binding enzyme C-terminal domain NV385_05210 PF00501 AMP-binding enzyme NV385_05210 PF00668 Condensation domain NV385_05210 PF00550 Phosphopantetheine attachment site NV385_05220 PF01032 FecCD transport family NV385_05225 PF01032 FecCD transport family NV385_05230 PF00005 ABC transporter NV385_05235 PF01497 Periplasmic binding protein NV385_05240 PF00593 TonB dependent receptor NV385_05240 PF07715 TonB-dependent Receptor Plug Domain NV385_05245 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NV385_05250 PF00550 Phosphopantetheine attachment site NV385_05250 PF00501 AMP-binding enzyme NV385_05250 PF00668 Condensation domain NV385_05255 PF00501 AMP-binding enzyme NV385_05255 PF13193 AMP-binding enzyme C-terminal domain NV385_05260 PF00857 Isochorismatase family NV385_05260 PF00550 Phosphopantetheine attachment site NV385_05265 PF00282 Pyridoxal-dependent decarboxylase conserved domain NV385_05275 PF00005 ABC transporter NV385_05280 PF00005 ABC transporter NV385_05285 PF00975 Thioesterase domain NV385_05295 PF00425 chorismate binding enzyme NV385_05305 PF01208 Uroporphyrinogen decarboxylase (URO-D) NV385_05310 PF05675 Protein of unknown function (DUF817) NV385_05325 PF00144 Beta-lactamase NV385_05335 PF01227 GTP cyclohydrolase I NV385_05340 PF00111 2Fe-2S iron-sulfur cluster binding domain NV385_05340 PF01799 [2Fe-2S] binding domain NV385_05345 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NV385_05345 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NV385_05360 PF00218 Indole-3-glycerol phosphate synthase NV385_05365 PF02885 Glycosyl transferase family, helical bundle domain NV385_05365 PF00591 Glycosyl transferase family, a/b domain NV385_05370 PF07715 TonB-dependent Receptor Plug Domain NV385_05370 PF00593 TonB dependent receptor NV385_05375 PF11838 ERAP1-like C-terminal domain NV385_05375 PF01433 Peptidase family M1 domain NV385_05380 PF00117 Glutamine amidotransferase class-I NV385_05390 PF00854 POT family NV385_05395 PF03951 Glutamine synthetase, beta-Grasp domain NV385_05395 PF00120 Glutamine synthetase, catalytic domain NV385_05400 PF04345 Chorismate lyase NV385_05405 PF01040 UbiA prenyltransferase family NV385_05440 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NV385_05440 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NV385_05445 PF01784 NIF3 (NGG1p interacting factor 3) NV385_05450 PF13180 PDZ domain NV385_05455 PF12627 Probable RNA and SrmB- binding site of polymerase A NV385_05455 PF01743 Poly A polymerase head domain NV385_05460 PF03949 Malic enzyme, NAD binding domain NV385_05460 PF00390 Malic enzyme, N-terminal domain NV385_05460 PF01515 Phosphate acetyl/butaryl transferase NV385_05465 PF00990 Diguanylate cyclase, GGDEF domain NV385_05465 PF00563 EAL domain NV385_05465 PF03707 Bacterial signalling protein N terminal repeat NV385_05470 PF04452 RNA methyltransferase NV385_05475 PF02219 Methylenetetrahydrofolate reductase NV385_05480 PF05221 S-adenosyl-L-homocysteine hydrolase NV385_05480 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NV385_05495 PF09317 Domain of unknown function (DUF1974) NV385_05495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_05495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_05500 PF04055 Radical SAM superfamily NV385_05505 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_05505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NV385_05515 PF07690 Major Facilitator Superfamily NV385_05525 PF00557 Metallopeptidase family M24 NV385_05530 PF00318 Ribosomal protein S2 NV385_05535 PF00889 Elongation factor TS NV385_05545 PF12833 Helix-turn-helix domain NV385_05565 PF03330 Lytic transglycolase NV385_05565 PF05036 Sporulation related domain NV385_05570 PF13406 Transglycosylase SLT domain NV385_05575 PF01098 Cell cycle protein NV385_05585 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NV385_05585 PF14489 QueF-like protein NV385_05590 PF01061 ABC-2 type transporter NV385_05595 PF00005 ABC transporter NV385_05625 PF00464 Serine hydroxymethyltransferase NV385_05630 PF02321 Outer membrane efflux protein NV385_05635 PF00873 AcrB/AcrD/AcrF family NV385_05640 PF13533 Biotin-lipoyl like NV385_05645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_05645 PF03466 LysR substrate binding domain NV385_05650 PF00497 Bacterial extracellular solute-binding proteins, family 3 NV385_05655 PF00528 Binding-protein-dependent transport system inner membrane component NV385_05660 PF00528 Binding-protein-dependent transport system inner membrane component NV385_05665 PF00005 ABC transporter NV385_05670 PF00893 Small Multidrug Resistance protein NV385_05675 PF00037 4Fe-4S binding domain NV385_05680 PF16325 Peptidase family U32 C-terminal domain NV385_05680 PF01136 Peptidase family U32 NV385_05685 PF00155 Aminotransferase class I and II NV385_05685 PF00392 Bacterial regulatory proteins, gntR family NV385_05690 PF02567 Phenazine biosynthesis-like protein NV385_05700 PF00970 Oxidoreductase FAD-binding domain NV385_05700 PF00175 Oxidoreductase NAD-binding domain NV385_05705 PF18389 TrmO C-terminal domain NV385_05705 PF01980 tRNA-methyltransferase O NV385_05715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NV385_05715 PF00437 Type II/IV secretion system protein NV385_05725 PF00072 Response regulator receiver domain NV385_05725 PF00486 Transcriptional regulatory protein, C terminal NV385_05730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_05730 PF00512 His Kinase A (phospho-acceptor) domain NV385_05730 PF08521 Two-component sensor kinase N-terminal NV385_05740 PF00293 NUDIX domain NV385_05750 PF14814 Bifunctional transglycosylase second domain NV385_05750 PF00905 Penicillin binding protein transpeptidase domain NV385_05750 PF00912 Transglycosylase NV385_05755 PF01513 ATP-NAD kinase NV385_05760 PF07023 Protein of unknown function (DUF1315) NV385_05765 PF00591 Glycosyl transferase family, a/b domain NV385_05765 PF02885 Glycosyl transferase family, helical bundle domain NV385_05770 PF00375 Sodium:dicarboxylate symporter family NV385_05775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_05775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_05775 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_05780 PF00756 Putative esterase NV385_05785 PF01817 Chorismate mutase type II NV385_05785 PF01842 ACT domain NV385_05785 PF00800 Prephenate dehydratase NV385_05790 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NV385_05800 PF07687 Peptidase dimerisation domain NV385_05800 PF01546 Peptidase family M20/M25/M40 NV385_05805 PF12706 Beta-lactamase superfamily domain NV385_05815 PF03883 Peroxide stress protein YaaA NV385_05825 PF05690 Thiazole biosynthesis protein ThiG NV385_05835 PF04241 Protein of unknown function (DUF423) NV385_05840 PF04545 Sigma-70, region 4 NV385_05840 PF00140 Sigma-70 factor, region 1.2 NV385_05840 PF04542 Sigma-70 region 2 NV385_05855 PF00313 'Cold-shock' DNA-binding domain NV385_05860 PF00270 DEAD/DEAH box helicase NV385_05860 PF00271 Helicase conserved C-terminal domain NV385_05870 PF00881 Nitroreductase family NV385_05875 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NV385_05875 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NV385_05885 PF00589 Phage integrase family NV385_05980 PF01555 DNA methylase NV385_06195 PF03869 Arc-like DNA binding domain NV385_06215 PF10145 Phage-related minor tail protein NV385_06215 PF01464 Transglycosylase SLT domain NV385_06215 PF01551 Peptidase family M23 NV385_06270 PF00589 Phage integrase family NV385_06365 PF01555 DNA methylase NV385_06580 PF03869 Arc-like DNA binding domain NV385_06600 PF10145 Phage-related minor tail protein NV385_06600 PF01551 Peptidase family M23 NV385_06600 PF01464 Transglycosylase SLT domain NV385_06665 PF01180 Dihydroorotate dehydrogenase NV385_06670 PF02674 Colicin V production protein NV385_06675 PF00156 Phosphoribosyl transferase domain NV385_06690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NV385_06690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NV385_06695 PF01435 Peptidase family M48 NV385_06700 PF09424 Yqey-like protein NV385_06705 PF01165 Ribosomal protein S21 NV385_06710 PF00814 Glycoprotease family NV385_06730 PF00069 Protein kinase domain NV385_06755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_06755 PF03466 LysR substrate binding domain NV385_06760 PF00202 Aminotransferase class-III NV385_06765 PF00171 Aldehyde dehydrogenase family NV385_06770 PF00324 Amino acid permease NV385_06800 PF04076 Bacterial OB fold (BOF) protein NV385_06825 PF00561 alpha/beta hydrolase fold NV385_06830 PF03616 Sodium/glutamate symporter NV385_06840 PF07729 FCD domain NV385_06840 PF00392 Bacterial regulatory proteins, gntR family NV385_06890 PF08946 Osmosensory transporter coiled coil NV385_06890 PF00083 Sugar (and other) transporter NV385_06915 PF00155 Aminotransferase class I and II NV385_06920 PF06826 Predicted Permease Membrane Region NV385_06920 PF02080 TrkA-C domain NV385_06930 PF04403 Paraquat-inducible protein A NV385_06935 PF02470 MlaD protein NV385_06945 PF01177 Asp/Glu/Hydantoin racemase NV385_06950 PF00892 EamA-like transporter family NV385_06955 PF07995 Glucose / Sorbosone dehydrogenase NV385_06965 PF13610 DDE domain NV385_06975 PF01636 Phosphotransferase enzyme family NV385_06980 PF13610 DDE domain NV385_06995 PF00132 Bacterial transferase hexapeptide (six repeats) NV385_07005 PF00893 Small Multidrug Resistance protein NV385_07010 PF00809 Pterin binding enzyme NV385_07025 PF07091 Ribosomal RNA methyltransferase (FmrO) NV385_07040 PF12848 ABC transporter NV385_07040 PF00005 ABC transporter NV385_07045 PF01636 Phosphotransferase enzyme family NV385_07055 PF13005 zinc-finger binding domain of transposase IS66 NV385_07055 PF13007 Transposase C of IS166 homeodomain NV385_07055 PF13817 IS66 C-terminal element NV385_07055 PF03050 Transposase IS66 family NV385_07060 PF13610 DDE domain NV385_07065 PF02678 Pirin NV385_07065 PF17954 Quercetinase C-terminal cupin domain NV385_07075 PF00106 short chain dehydrogenase NV385_07080 PF00743 Flavin-binding monooxygenase-like NV385_07090 PF00860 Permease family NV385_07095 PF00962 Adenosine/AMP deaminase NV385_07100 PF01292 Prokaryotic cytochrome b561 NV385_07110 PF01351 Ribonuclease HII NV385_07115 PF02599 Global regulator protein family NV385_07120 PF00696 Amino acid kinase family NV385_07120 PF13840 ACT domain NV385_07120 PF01842 ACT domain NV385_07125 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NV385_07125 PF01411 tRNA synthetases class II (A) NV385_07125 PF02272 DHHA1 domain NV385_07130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NV385_07130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NV385_07135 PF13393 Histidyl-tRNA synthetase NV385_07140 PF00709 Adenylosuccinate synthetase NV385_07155 PF00248 Aldo/keto reductase family NV385_07165 PF00027 Cyclic nucleotide-binding domain NV385_07165 PF13545 Crp-like helix-turn-helix domain NV385_07175 PF02566 OsmC-like protein NV385_07190 PF00004 ATPase family associated with various cellular activities (AAA) NV385_07190 PF07724 AAA domain (Cdc48 subfamily) NV385_07190 PF17871 AAA lid domain NV385_07190 PF02861 Clp amino terminal domain, pathogenicity island component NV385_07190 PF10431 C-terminal, D2-small domain, of ClpB protein NV385_07205 PF10672 S-adenosylmethionine-dependent methyltransferase NV385_07205 PF01170 Putative RNA methylase family UPF0020 NV385_07205 PF02926 THUMP domain NV385_07215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NV385_07215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NV385_07220 PF01979 Amidohydrolase family NV385_07225 PF13488 Glycine zipper NV385_07225 PF00691 OmpA family NV385_07235 PF00043 Glutathione S-transferase, C-terminal domain NV385_07235 PF13417 Glutathione S-transferase, N-terminal domain NV385_07240 PF02390 Putative methyltransferase NV385_07250 PF00043 Glutathione S-transferase, C-terminal domain NV385_07250 PF02798 Glutathione S-transferase, N-terminal domain NV385_07260 PF13192 Thioredoxin domain NV385_07260 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_07280 PF10417 C-terminal domain of 1-Cys peroxiredoxin NV385_07280 PF00578 AhpC/TSA family NV385_07285 PF04408 Helicase associated domain (HA2) NV385_07285 PF00270 DEAD/DEAH box helicase NV385_07285 PF11898 Domain of unknown function (DUF3418) NV385_07285 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NV385_07285 PF00271 Helicase conserved C-terminal domain NV385_07290 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NV385_07290 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NV385_07300 PF07690 Major Facilitator Superfamily NV385_07305 PF03594 Benzoate membrane transport protein NV385_07310 PF00106 short chain dehydrogenase NV385_07315 PF00970 Oxidoreductase FAD-binding domain NV385_07315 PF00111 2Fe-2S iron-sulfur cluster binding domain NV385_07315 PF00175 Oxidoreductase NAD-binding domain NV385_07320 PF00866 Ring hydroxylating beta subunit NV385_07325 PF00355 Rieske [2Fe-2S] domain NV385_07325 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NV385_07335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_07335 PF03466 LysR substrate binding domain NV385_07345 PF00403 Heavy-metal-associated domain NV385_07350 PF00376 MerR family regulatory protein NV385_07350 PF09278 MerR, DNA binding NV385_07385 PF02601 Exonuclease VII, large subunit NV385_07385 PF13742 OB-fold nucleic acid binding domain NV385_07415 PF01810 LysE type translocator NV385_07420 PF00313 'Cold-shock' DNA-binding domain NV385_07430 PF03807 NADP oxidoreductase coenzyme F420-dependent NV385_07430 PF14748 Pyrroline-5-carboxylate reductase dimerisation NV385_07460 PF07690 Major Facilitator Superfamily NV385_07465 PF01638 HxlR-like helix-turn-helix NV385_07490 PF09190 DALR domain NV385_07490 PF01406 tRNA synthetases class I (C) catalytic domain NV385_07495 PF00571 CBS domain NV385_07495 PF01380 SIS domain NV385_07510 PF03968 OstA-like protein NV385_07515 PF00005 ABC transporter NV385_07515 PF12399 Branched-chain amino acid ATP-binding cassette transporter NV385_07520 PF02321 Outer membrane efflux protein NV385_07525 PF03412 Peptidase C39 family NV385_07525 PF00664 ABC transporter transmembrane region NV385_07525 PF00005 ABC transporter NV385_07535 PF01205 Uncharacterized protein family UPF0029 NV385_07540 PF00132 Bacterial transferase hexapeptide (six repeats) NV385_07550 PF01596 O-methyltransferase NV385_07560 PF11953 Domain of unknown function (DUF3470) NV385_07560 PF00037 4Fe-4S binding domain NV385_07570 PF05190 MutS family domain IV NV385_07570 PF01624 MutS domain I NV385_07570 PF05192 MutS domain III NV385_07570 PF05188 MutS domain II NV385_07570 PF00488 MutS domain V NV385_07575 PF01037 Lrp/AsnC ligand binding domain NV385_07580 PF00892 EamA-like transporter family NV385_07585 PF00990 Diguanylate cyclase, GGDEF domain NV385_07585 PF00563 EAL domain NV385_07585 PF03707 Bacterial signalling protein N terminal repeat NV385_07590 PF03279 Bacterial lipid A biosynthesis acyltransferase NV385_07605 PF07690 Major Facilitator Superfamily NV385_07625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NV385_07625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NV385_07645 PF13419 Haloacid dehalogenase-like hydrolase NV385_07655 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NV385_07655 PF13296 Putative type VI secretion system Rhs element Vgr NV385_07655 PF04717 Type VI secretion system, phage-baseplate injector NV385_07660 PF05593 RHS Repeat NV385_07660 PF03527 RHS protein NV385_07675 PF03466 LysR substrate binding domain NV385_07675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_07680 PF01566 Natural resistance-associated macrophage protein NV385_07685 PF03746 LamB/YcsF family NV385_07690 PF07286 Protein of unknown function (DUF1445) NV385_07700 PF02785 Biotin carboxylase C-terminal domain NV385_07700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NV385_07700 PF00289 Biotin carboxylase, N-terminal domain NV385_07700 PF00364 Biotin-requiring enzyme NV385_07705 PF00654 Voltage gated chloride channel NV385_07725 PF00440 Bacterial regulatory proteins, tetR family NV385_07735 PF08240 Alcohol dehydrogenase GroES-like domain NV385_07735 PF13823 Alcohol dehydrogenase GroES-associated NV385_07735 PF00107 Zinc-binding dehydrogenase NV385_07750 PF02785 Biotin carboxylase C-terminal domain NV385_07750 PF00289 Biotin carboxylase, N-terminal domain NV385_07750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NV385_07755 PF02525 Flavodoxin-like fold NV385_07775 PF08753 NikR C terminal nickel binding domain NV385_07775 PF01402 Ribbon-helix-helix protein, copG family NV385_07780 PF01425 Amidase NV385_07790 PF13610 DDE domain NV385_07805 PF00375 Sodium:dicarboxylate symporter family NV385_07815 PF00753 Metallo-beta-lactamase superfamily NV385_07815 PF16123 Hydroxyacylglutathione hydrolase C-terminus NV385_07820 PF00528 Binding-protein-dependent transport system inner membrane component NV385_07825 PF09383 NIL domain NV385_07825 PF00005 ABC transporter NV385_07830 PF03180 NLPA lipoprotein NV385_07835 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NV385_07835 PF02843 Phosphoribosylglycinamide synthetase, C domain NV385_07835 PF02844 Phosphoribosylglycinamide synthetase, N domain NV385_07840 PF01808 AICARFT/IMPCHase bienzyme NV385_07840 PF02142 MGS-like domain NV385_07845 PF02954 Bacterial regulatory protein, Fis family NV385_07865 PF13932 GidA associated domain NV385_07865 PF01134 Glucose inhibited division protein A NV385_07875 PF14403 Circularly permuted ATP-grasp type 2 NV385_07885 PF01841 Transglutaminase-like superfamily NV385_07885 PF08379 Bacterial transglutaminase-like N-terminal region NV385_07895 PF00842 Alanine racemase, C-terminal domain NV385_07895 PF01168 Alanine racemase, N-terminal domain NV385_07900 PF03796 DnaB-like helicase C terminal domain NV385_07900 PF00772 DnaB-like helicase N terminal domain NV385_07905 PF03948 Ribosomal protein L9, C-terminal domain NV385_07905 PF01281 Ribosomal protein L9, N-terminal domain NV385_07910 PF01084 Ribosomal protein S18 NV385_07915 PF01250 Ribosomal protein S6 NV385_07920 PF01040 UbiA prenyltransferase family NV385_07925 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NV385_07930 PF00510 Cytochrome c oxidase subunit III NV385_07935 PF00115 Cytochrome C and Quinol oxidase polypeptide I NV385_07940 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NV385_07940 PF06481 COX Aromatic Rich Motif NV385_07950 PF00391 PEP-utilising enzyme, mobile domain NV385_07950 PF02896 PEP-utilising enzyme, TIM barrel domain NV385_07950 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NV385_07955 PF03618 Kinase/pyrophosphorylase NV385_07965 PF14883 Hypothetical glycosyl hydrolase family 13 NV385_07965 PF01522 Polysaccharide deacetylase NV385_07970 PF00535 Glycosyl transferase family 2 NV385_07975 PF13994 PgaD-like protein NV385_07985 PF00296 Luciferase-like monooxygenase NV385_08000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_08000 PF03466 LysR substrate binding domain NV385_08010 PF03462 PCRF domain NV385_08010 PF00472 RF-1 domain NV385_08015 PF13847 Methyltransferase domain NV385_08015 PF17827 PrmC N-terminal domain NV385_08020 PF00528 Binding-protein-dependent transport system inner membrane component NV385_08025 PF09084 NMT1/THI5 like NV385_08030 PF12833 Helix-turn-helix domain NV385_08035 PF00106 short chain dehydrogenase NV385_08040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_08040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_08040 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_08045 PF13193 AMP-binding enzyme C-terminal domain NV385_08045 PF00501 AMP-binding enzyme NV385_08050 PF01613 Flavin reductase like domain NV385_08055 PF00899 ThiF family NV385_08060 PF03109 ABC1 family NV385_08075 PF03814 Potassium-transporting ATPase A subunit NV385_08085 PF02669 K+-transporting ATPase, c chain NV385_08090 PF02702 Osmosensitive K+ channel His kinase sensor domain NV385_08090 PF13493 Domain of unknown function (DUF4118) NV385_08090 PF00512 His Kinase A (phospho-acceptor) domain NV385_08090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_08095 PF00486 Transcriptional regulatory protein, C terminal NV385_08095 PF00072 Response regulator receiver domain NV385_08100 PF00120 Glutamine synthetase, catalytic domain NV385_08110 PF03232 Ubiquinone biosynthesis protein COQ7 NV385_08115 PF07690 Major Facilitator Superfamily NV385_08120 PF17243 POTRA domain TamA domain 1 NV385_08120 PF07244 Surface antigen variable number repeat NV385_08120 PF01103 Surface antigen NV385_08135 PF11791 Aconitate B N-terminal domain NV385_08135 PF06434 Aconitate hydratase 2 N-terminus NV385_08135 PF00330 Aconitase family (aconitate hydratase) NV385_08145 PF00520 Ion transport protein NV385_08145 PF00027 Cyclic nucleotide-binding domain NV385_08150 PF07690 Major Facilitator Superfamily NV385_08165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_08165 PF03466 LysR substrate binding domain NV385_08170 PF04284 Protein of unknown function (DUF441) NV385_08180 PF00849 RNA pseudouridylate synthase NV385_08180 PF01479 S4 domain NV385_08195 PF01479 S4 domain NV385_08195 PF00849 RNA pseudouridylate synthase NV385_08200 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NV385_08205 PF01119 DNA mismatch repair protein, C-terminal domain NV385_08205 PF08676 MutL C terminal dimerisation domain NV385_08215 PF17209 Hfq protein NV385_08225 PF00881 Nitroreductase family NV385_08235 PF00149 Calcineurin-like phosphoesterase NV385_08240 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NV385_08245 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NV385_08245 PF00749 tRNA synthetases class I (E and Q), catalytic domain NV385_08250 PF02540 NAD synthase NV385_08250 PF00117 Glutamine amidotransferase class-I NV385_08250 PF00958 GMP synthase C terminal domain NV385_08255 PF05985 Ethanolamine ammonia-lyase light chain (EutC) NV385_08260 PF06751 Ethanolamine ammonia lyase large subunit (EutB) NV385_08265 PF13520 Amino acid permease NV385_08270 PF00171 Aldehyde dehydrogenase family NV385_08285 PF00465 Iron-containing alcohol dehydrogenase NV385_08290 PF14493 Helix-turn-helix domain NV385_08290 PF05970 PIF1-like helicase NV385_08300 PF06445 GyrI-like small molecule binding domain NV385_08305 PF02110 Hydroxyethylthiazole kinase family NV385_08320 PF11940 Domain of unknown function (DUF3458) Ig-like fold NV385_08320 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NV385_08320 PF01433 Peptidase family M1 domain NV385_08330 PF00106 short chain dehydrogenase NV385_08340 PF01817 Chorismate mutase type II NV385_08345 PF01037 Lrp/AsnC ligand binding domain NV385_08360 PF00440 Bacterial regulatory proteins, tetR family NV385_08365 PF07715 TonB-dependent Receptor Plug Domain NV385_08365 PF00593 TonB dependent receptor NV385_08370 PF00924 Mechanosensitive ion channel NV385_08405 PF07715 TonB-dependent Receptor Plug Domain NV385_08405 PF00593 TonB dependent receptor NV385_08425 PF12848 ABC transporter NV385_08425 PF00005 ABC transporter NV385_08430 PF00582 Universal stress protein family NV385_08455 PF00689 Cation transporting ATPase, C-terminus NV385_08455 PF00690 Cation transporter/ATPase, N-terminus NV385_08460 PF02308 MgtC family NV385_08465 PF03594 Benzoate membrane transport protein NV385_08470 PF01037 Lrp/AsnC ligand binding domain NV385_08475 PF01810 LysE type translocator NV385_08480 PF00923 Transaldolase/Fructose-6-phosphate aldolase NV385_08485 PF03466 LysR substrate binding domain NV385_08485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_08495 PF00108 Thiolase, N-terminal domain NV385_08495 PF02803 Thiolase, C-terminal domain NV385_08505 PF01575 MaoC like domain NV385_08510 PF00144 Beta-lactamase NV385_08520 PF07690 Major Facilitator Superfamily NV385_08525 PF12169 DNA polymerase III subunits gamma and tau domain III NV385_08525 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NV385_08525 PF12170 DNA polymerase III tau subunit V interacting with alpha NV385_08530 PF05506 Domain of unknown function (DUF756) NV385_08530 PF04185 Phosphoesterase family NV385_08535 PF03061 Thioesterase superfamily NV385_08540 PF00465 Iron-containing alcohol dehydrogenase NV385_08550 PF01451 Low molecular weight phosphotyrosine protein phosphatase NV385_08555 PF01565 FAD binding domain NV385_08555 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NV385_08570 PF01645 Conserved region in glutamate synthase NV385_08640 PF12161 HsdM N-terminal domain NV385_08640 PF02384 N-6 DNA Methylase NV385_08670 PF01555 DNA methylase NV385_08920 PF12832 MFS_1 like family NV385_08930 PF02785 Biotin carboxylase C-terminal domain NV385_08930 PF00289 Biotin carboxylase, N-terminal domain NV385_08930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NV385_08935 PF00364 Biotin-requiring enzyme NV385_08940 PF01220 Dehydroquinase class II NV385_08945 PF11799 impB/mucB/samB family C-terminal domain NV385_08945 PF00817 impB/mucB/samB family NV385_08945 PF13438 Domain of unknown function (DUF4113) NV385_08955 PF00005 ABC transporter NV385_08960 PF00072 Response regulator receiver domain NV385_08960 PF00486 Transcriptional regulatory protein, C terminal NV385_08970 PF04324 BFD-like [2Fe-2S] binding domain NV385_08970 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NV385_08970 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NV385_08970 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_08970 PF18267 Rubredoxin NAD+ reductase C-terminal domain NV385_08970 PF13806 Rieske-like [2Fe-2S] domain NV385_08975 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NV385_08975 PF04324 BFD-like [2Fe-2S] binding domain NV385_08975 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NV385_08975 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_08975 PF18267 Rubredoxin NAD+ reductase C-terminal domain NV385_08980 PF04324 BFD-like [2Fe-2S] binding domain NV385_08980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NV385_08980 PF00384 Molybdopterin oxidoreductase NV385_08980 PF01568 Molydopterin dinucleotide binding domain NV385_08985 PF12804 MobA-like NTP transferase domain NV385_08990 PF00384 Molybdopterin oxidoreductase NV385_08990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NV385_08990 PF01568 Molydopterin dinucleotide binding domain NV385_08995 PF06463 Molybdenum Cofactor Synthesis C NV385_08995 PF04055 Radical SAM superfamily NV385_09005 PF02391 MoaE protein NV385_09010 PF01967 MoaC family NV385_09010 PF00994 Probable molybdopterin binding domain NV385_09015 PF00994 Probable molybdopterin binding domain NV385_09015 PF03454 MoeA C-terminal region (domain IV) NV385_09015 PF03453 MoeA N-terminal region (domain I and II) NV385_09020 PF01638 HxlR-like helix-turn-helix NV385_09025 PF00392 Bacterial regulatory proteins, gntR family NV385_09025 PF00155 Aminotransferase class I and II NV385_09030 PF00892 EamA-like transporter family NV385_09050 PF02635 DsrE/DsrF-like family NV385_09055 PF16363 GDP-mannose 4,6 dehydratase NV385_09060 PF10415 Fumarase C C-terminus NV385_09060 PF00206 Lyase NV385_09080 PF01266 FAD dependent oxidoreductase NV385_09090 PF02542 YgbB family NV385_09100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NV385_09100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NV385_09120 PF00158 Sigma-54 interaction domain NV385_09120 PF02954 Bacterial regulatory protein, Fis family NV385_09120 PF00072 Response regulator receiver domain NV385_09125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_09125 PF00512 His Kinase A (phospho-acceptor) domain NV385_09125 PF00989 PAS fold NV385_09130 PF18693 TRAM domain NV385_09130 PF00919 Uncharacterized protein family UPF0004 NV385_09130 PF04055 Radical SAM superfamily NV385_09135 PF00696 Amino acid kinase family NV385_09140 PF01765 Ribosome recycling factor NV385_09145 PF01255 Putative undecaprenyl diphosphate synthase NV385_09155 PF13288 DXP reductoisomerase C-terminal domain NV385_09155 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NV385_09155 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NV385_09160 PF13180 PDZ domain NV385_09160 PF17820 PDZ domain NV385_09160 PF02163 Peptidase family M50 NV385_09165 PF01103 Surface antigen NV385_09165 PF07244 Surface antigen variable number repeat NV385_09175 PF00132 Bacterial transferase hexapeptide (six repeats) NV385_09175 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NV385_09180 PF07977 FabA-like domain NV385_09185 PF00132 Bacterial transferase hexapeptide (six repeats) NV385_09185 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NV385_09200 PF02631 RecX family NV385_09205 PF00154 recA bacterial DNA recombination protein NV385_09210 PF01479 S4 domain NV385_09215 PF13419 Haloacid dehalogenase-like hydrolase NV385_09240 PF01037 Lrp/AsnC ligand binding domain NV385_09245 PF00266 Aminotransferase class-V NV385_09250 PF00324 Amino acid permease NV385_09265 PF05922 Peptidase inhibitor I9 NV385_09265 PF00082 Subtilase family NV385_09270 PF01740 STAS domain NV385_09270 PF00916 Sulfate permease family NV385_09275 PF02586 SOS response associated peptidase (SRAP) NV385_09280 PF07995 Glucose / Sorbosone dehydrogenase NV385_09290 PF00563 EAL domain NV385_09290 PF00990 Diguanylate cyclase, GGDEF domain NV385_09290 PF03707 Bacterial signalling protein N terminal repeat NV385_09310 PF02378 Phosphotransferase system, EIIC NV385_09310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NV385_09315 PF00294 pfkB family carbohydrate kinase NV385_09320 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NV385_09320 PF00381 PTS HPr component phosphorylation site NV385_09320 PF00391 PEP-utilising enzyme, mobile domain NV385_09320 PF02896 PEP-utilising enzyme, TIM barrel domain NV385_09320 PF05524 PEP-utilising enzyme, N-terminal NV385_09345 PF05525 Branched-chain amino acid transport protein NV385_09350 PF00557 Metallopeptidase family M24 NV385_09355 PF03466 LysR substrate binding domain NV385_09355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_09365 PF00462 Glutaredoxin NV385_09370 PF00202 Aminotransferase class-III NV385_09375 PF00571 CBS domain NV385_09375 PF00478 IMP dehydrogenase / GMP reductase domain NV385_09400 PF00448 SRP54-type protein, GTPase domain NV385_09400 PF02881 SRP54-type protein, helical bundle domain NV385_09410 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NV385_09425 PF08173 Membrane bound YbgT-like protein NV385_09430 PF02322 Cytochrome bd terminal oxidase subunit II NV385_09435 PF01654 Cytochrome bd terminal oxidase subunit I NV385_09445 PF07290 Protein of unknown function (DUF1449) NV385_09455 PF00294 pfkB family carbohydrate kinase NV385_09460 PF00593 TonB dependent receptor NV385_09460 PF07715 TonB-dependent Receptor Plug Domain NV385_09465 PF00675 Insulinase (Peptidase family M16) NV385_09465 PF05193 Peptidase M16 inactive domain NV385_09465 PF08367 Peptidase M16C associated NV385_09470 PF02253 Phospholipase A1 NV385_09475 PF02386 Cation transport protein NV385_09480 PF02080 TrkA-C domain NV385_09480 PF02254 TrkA-N domain NV385_09485 PF00291 Pyridoxal-phosphate dependent enzyme NV385_09485 PF00585 C-terminal regulatory domain of Threonine dehydratase NV385_09490 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NV385_09505 PF02774 Semialdehyde dehydrogenase, dimerisation domain NV385_09505 PF01118 Semialdehyde dehydrogenase, NAD binding domain NV385_09515 PF02617 ATP-dependent Clp protease adaptor protein ClpS NV385_09520 PF00004 ATPase family associated with various cellular activities (AAA) NV385_09520 PF07724 AAA domain (Cdc48 subfamily) NV385_09520 PF17871 AAA lid domain NV385_09520 PF02861 Clp amino terminal domain, pathogenicity island component NV385_09520 PF10431 C-terminal, D2-small domain, of ClpB protein NV385_09525 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NV385_09530 PF00793 DAHP synthetase I family NV385_09545 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NV385_09545 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_09575 PF06418 CTP synthase N-terminus NV385_09575 PF00117 Glutamine amidotransferase class-I NV385_09580 PF00793 DAHP synthetase I family NV385_09585 PF00113 Enolase, C-terminal TIM barrel domain NV385_09585 PF03952 Enolase, N-terminal domain NV385_09590 PF04239 Protein of unknown function (DUF421) NV385_09595 PF04977 Septum formation initiator NV385_09600 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NV385_09605 PF01144 Coenzyme A transferase NV385_09610 PF01144 Coenzyme A transferase NV385_09615 PF00108 Thiolase, N-terminal domain NV385_09615 PF02803 Thiolase, C-terminal domain NV385_09620 PF10397 Adenylosuccinate lyase C-terminus NV385_09620 PF00206 Lyase NV385_09625 PF00561 alpha/beta hydrolase fold NV385_09630 PF07690 Major Facilitator Superfamily NV385_09635 PF02627 Carboxymuconolactone decarboxylase family NV385_09640 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NV385_09640 PF00775 Dioxygenase NV385_09645 PF00775 Dioxygenase NV385_09650 PF01487 Type I 3-dehydroquinase NV385_09655 PF05048 Periplasmic copper-binding protein (NosD) NV385_09660 PF04966 Carbohydrate-selective porin, OprB family NV385_09665 PF13360 PQQ-like domain NV385_09665 PF01011 PQQ enzyme repeat NV385_09675 PF04143 Sulphur transport NV385_09685 PF00753 Metallo-beta-lactamase superfamily NV385_09690 PF01614 Bacterial transcriptional regulator NV385_09690 PF09339 IclR helix-turn-helix domain NV385_09695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_09695 PF03466 LysR substrate binding domain NV385_09700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_09700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_09700 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_09715 PF00106 short chain dehydrogenase NV385_09725 PF07690 Major Facilitator Superfamily NV385_09735 PF01425 Amidase NV385_09740 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NV385_09755 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NV385_09755 PF00355 Rieske [2Fe-2S] domain NV385_09770 PF00175 Oxidoreductase NAD-binding domain NV385_09770 PF00111 2Fe-2S iron-sulfur cluster binding domain NV385_09775 PF01613 Flavin reductase like domain NV385_09780 PF02311 AraC-like ligand binding domain NV385_09780 PF12833 Helix-turn-helix domain NV385_09785 PF02728 Copper amine oxidase, N3 domain NV385_09785 PF02727 Copper amine oxidase, N2 domain NV385_09785 PF07833 Copper amine oxidase N-terminal domain NV385_09785 PF01179 Copper amine oxidase, enzyme domain NV385_09795 PF00171 Aldehyde dehydrogenase family NV385_09800 PF01804 Penicillin amidase NV385_09805 PF12146 Serine aminopeptidase, S33 NV385_09810 PF00108 Thiolase, N-terminal domain NV385_09810 PF02803 Thiolase, C-terminal domain NV385_09815 PF01144 Coenzyme A transferase NV385_09820 PF01144 Coenzyme A transferase NV385_09825 PF00775 Dioxygenase NV385_09825 PF04444 Catechol dioxygenase N terminus NV385_09830 PF02426 Muconolactone delta-isomerase NV385_09835 PF13378 Enolase C-terminal domain-like NV385_09835 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NV385_09840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_09840 PF03466 LysR substrate binding domain NV385_09850 PF07729 FCD domain NV385_09850 PF00392 Bacterial regulatory proteins, gntR family NV385_09855 PF00920 Dehydratase family NV385_09860 PF07690 Major Facilitator Superfamily NV385_09870 PF00171 Aldehyde dehydrogenase family NV385_09890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_09890 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_09890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_09900 PF06506 Propionate catabolism activator NV385_09900 PF02954 Bacterial regulatory protein, Fis family NV385_09900 PF00158 Sigma-54 interaction domain NV385_09905 PF00501 AMP-binding enzyme NV385_09905 PF13193 AMP-binding enzyme C-terminal domain NV385_09910 PF04341 Protein of unknown function, DUF485 NV385_09915 PF00474 Sodium:solute symporter family NV385_09920 PF08240 Alcohol dehydrogenase GroES-like domain NV385_09920 PF00107 Zinc-binding dehydrogenase NV385_09925 PF00171 Aldehyde dehydrogenase family NV385_09935 PF00561 alpha/beta hydrolase fold NV385_09940 PF00199 Catalase NV385_09940 PF06628 Catalase-related immune-responsive NV385_09955 PF07859 alpha/beta hydrolase fold NV385_09960 PF01047 MarR family NV385_09965 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NV385_09965 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_09970 PF00106 short chain dehydrogenase NV385_09975 PF01872 RibD C-terminal domain NV385_09980 PF09278 MerR, DNA binding NV385_09980 PF00376 MerR family regulatory protein NV385_09990 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_10000 PF12706 Beta-lactamase superfamily domain NV385_10005 PF08359 YsiA-like protein, C-terminal region NV385_10005 PF00440 Bacterial regulatory proteins, tetR family NV385_10015 PF00857 Isochorismatase family NV385_10020 PF03466 LysR substrate binding domain NV385_10020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_10025 PF07995 Glucose / Sorbosone dehydrogenase NV385_10030 PF02254 TrkA-N domain NV385_10030 PF00999 Sodium/hydrogen exchanger family NV385_10040 PF07687 Peptidase dimerisation domain NV385_10040 PF01546 Peptidase family M20/M25/M40 NV385_10050 PF08479 POTRA domain, ShlB-type NV385_10050 PF17287 POTRA domain NV385_10050 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NV385_10055 PF04829 Pre-toxin domain with VENN motif NV385_10055 PF13332 Hemagglutinin repeat NV385_10055 PF13018 Extended Signal Peptide of Type V secretion system NV385_10055 PF05860 haemagglutination activity domain NV385_10070 PF07690 Major Facilitator Superfamily NV385_10075 PF04909 Amidohydrolase NV385_10085 PF00392 Bacterial regulatory proteins, gntR family NV385_10085 PF07702 UTRA domain NV385_10090 PF08450 SMP-30/Gluconolactonase/LRE-like region NV385_10100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_10100 PF03466 LysR substrate binding domain NV385_10120 PF07690 Major Facilitator Superfamily NV385_10125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NV385_10125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NV385_10125 PF01842 ACT domain NV385_10130 PF03737 Aldolase/RraA NV385_10160 PF00529 HlyD membrane-fusion protein of T1SS NV385_10160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NV385_10175 PF00171 Aldehyde dehydrogenase family NV385_10180 PF00920 Dehydratase family NV385_10190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_10190 PF03466 LysR substrate binding domain NV385_10195 PF01370 NAD dependent epimerase/dehydratase family NV385_10200 PF07690 Major Facilitator Superfamily NV385_10205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NV385_10205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NV385_10210 PF12833 Helix-turn-helix domain NV385_10210 PF06719 AraC-type transcriptional regulator N-terminus NV385_10225 PF08240 Alcohol dehydrogenase GroES-like domain NV385_10225 PF00107 Zinc-binding dehydrogenase NV385_10235 PF01032 FecCD transport family NV385_10240 PF00005 ABC transporter NV385_10260 PF14572 Phosphoribosyl synthetase-associated domain NV385_10260 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NV385_10265 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NV385_10345 PF00196 Bacterial regulatory proteins, luxR family NV385_10350 PF01425 Amidase NV385_10355 PF13533 Biotin-lipoyl like NV385_10360 PF07690 Major Facilitator Superfamily NV385_10385 PF01975 Survival protein SurE NV385_10395 PF13291 ACT domain NV385_10395 PF04607 Region found in RelA / SpoT proteins NV385_10395 PF02824 TGS domain NV385_10445 PF12146 Serine aminopeptidase, S33 NV385_10450 PF02311 AraC-like ligand binding domain NV385_10450 PF12833 Helix-turn-helix domain NV385_10465 PF16527 Two-component sensor protein CpxA, periplasmic domain NV385_10465 PF00672 HAMP domain NV385_10465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_10465 PF00512 His Kinase A (phospho-acceptor) domain NV385_10470 PF00486 Transcriptional regulatory protein, C terminal NV385_10470 PF00072 Response regulator receiver domain NV385_10475 PF00529 HlyD membrane-fusion protein of T1SS NV385_10475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NV385_10480 PF00873 AcrB/AcrD/AcrF family NV385_10485 PF02321 Outer membrane efflux protein NV385_10490 PF12146 Serine aminopeptidase, S33 NV385_10495 PF00743 Flavin-binding monooxygenase-like NV385_10500 PF01593 Flavin containing amine oxidoreductase NV385_10515 PF01266 FAD dependent oxidoreductase NV385_10535 PF16970 Type-1 fimbrial protein, A NV385_10545 PF02753 Pili assembly chaperone PapD, C-terminal domain NV385_10545 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NV385_10550 PF13954 PapC N-terminal domain NV385_10550 PF13953 PapC C-terminal domain NV385_10550 PF00577 Outer membrane usher protein NV385_10555 PF00419 Fimbrial protein NV385_10565 PF08240 Alcohol dehydrogenase GroES-like domain NV385_10565 PF00107 Zinc-binding dehydrogenase NV385_10575 PF00199 Catalase NV385_10590 PF13091 PLD-like domain NV385_10605 PF01244 Membrane dipeptidase (Peptidase family M19) NV385_10610 PF13186 Iron-sulfur cluster-binding domain NV385_10610 PF04055 Radical SAM superfamily NV385_10615 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NV385_10620 PF03070 TENA/THI-4/PQQC family NV385_10625 PF12706 Beta-lactamase superfamily domain NV385_10630 PF08042 PqqA family NV385_10635 PF13089 Polyphosphate kinase N-terminal domain NV385_10635 PF17941 Polyphosphate kinase C-terminal domain 1 NV385_10635 PF13090 Polyphosphate kinase C-terminal domain 2 NV385_10635 PF02503 Polyphosphate kinase middle domain NV385_10640 PF00149 Calcineurin-like phosphoesterase NV385_10650 PF00550 Phosphopantetheine attachment site NV385_10650 PF00857 Isochorismatase family NV385_10655 PF00106 short chain dehydrogenase NV385_10660 PF03459 TOBE domain NV385_10660 PF00005 ABC transporter NV385_10665 PF00528 Binding-protein-dependent transport system inner membrane component NV385_10675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_10675 PF03459 TOBE domain NV385_10680 PF00355 Rieske [2Fe-2S] domain NV385_10680 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NV385_10685 PF00866 Ring hydroxylating beta subunit NV385_10690 PF00175 Oxidoreductase NAD-binding domain NV385_10690 PF00970 Oxidoreductase FAD-binding domain NV385_10690 PF00111 2Fe-2S iron-sulfur cluster binding domain NV385_10695 PF12833 Helix-turn-helix domain NV385_10695 PF14525 AraC-binding-like domain NV385_10705 PF01613 Flavin reductase like domain NV385_10720 PF01738 Dienelactone hydrolase family NV385_10725 PF07690 Major Facilitator Superfamily NV385_10730 PF06719 AraC-type transcriptional regulator N-terminus NV385_10730 PF12833 Helix-turn-helix domain NV385_10755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_10755 PF03466 LysR substrate binding domain NV385_10760 PF01144 Coenzyme A transferase NV385_10765 PF01144 Coenzyme A transferase NV385_10770 PF02667 Short chain fatty acid transporter NV385_10775 PF00108 Thiolase, N-terminal domain NV385_10775 PF02803 Thiolase, C-terminal domain NV385_10780 PF03466 LysR substrate binding domain NV385_10780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_10785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_10785 PF03466 LysR substrate binding domain NV385_10800 PF00206 Lyase NV385_10800 PF10415 Fumarase C C-terminus NV385_10805 PF00593 TonB dependent receptor NV385_10805 PF07715 TonB-dependent Receptor Plug Domain NV385_10810 PF00083 Sugar (and other) transporter NV385_10825 PF00005 ABC transporter NV385_10830 PF00528 Binding-protein-dependent transport system inner membrane component NV385_10835 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NV385_10850 PF00392 Bacterial regulatory proteins, gntR family NV385_10850 PF07702 UTRA domain NV385_10860 PF02525 Flavodoxin-like fold NV385_10865 PF01638 HxlR-like helix-turn-helix NV385_10870 PF12833 Helix-turn-helix domain NV385_10870 PF06445 GyrI-like small molecule binding domain NV385_10885 PF01925 Sulfite exporter TauE/SafE NV385_10900 PF00753 Metallo-beta-lactamase superfamily NV385_10900 PF04273 Putative phosphatase (DUF442) NV385_10905 PF02954 Bacterial regulatory protein, Fis family NV385_10905 PF00158 Sigma-54 interaction domain NV385_10905 PF00072 Response regulator receiver domain NV385_10910 PF01062 Bestrophin, RFP-TM, chloride channel NV385_10915 PF08240 Alcohol dehydrogenase GroES-like domain NV385_10915 PF00107 Zinc-binding dehydrogenase NV385_10920 PF00106 short chain dehydrogenase NV385_10925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NV385_10925 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_10930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NV385_10930 PF02817 e3 binding domain NV385_10930 PF00364 Biotin-requiring enzyme NV385_10935 PF02779 Transketolase, pyrimidine binding domain NV385_10935 PF02780 Transketolase, C-terminal domain NV385_10940 PF00676 Dehydrogenase E1 component NV385_10945 PF04055 Radical SAM superfamily NV385_10960 PF00990 Diguanylate cyclase, GGDEF domain NV385_10960 PF08448 PAS fold NV385_10965 PF01264 Chorismate synthase NV385_10970 PF05175 Methyltransferase small domain NV385_10975 PF00291 Pyridoxal-phosphate dependent enzyme NV385_10985 PF00004 ATPase family associated with various cellular activities (AAA) NV385_10985 PF01434 Peptidase family M41 NV385_10985 PF17862 AAA+ lid domain NV385_10995 PF05166 YcgL domain NV385_11015 PF00570 HRDC domain NV385_11015 PF01612 3'-5' exonuclease NV385_11020 PF02132 RecR protein NV385_11020 PF13662 Toprim domain NV385_11025 PF02575 YbaB/EbfC DNA-binding family NV385_11035 PF01053 Cys/Met metabolism PLP-dependent enzyme NV385_11040 PF00561 alpha/beta hydrolase fold NV385_11045 PF08241 Methyltransferase domain NV385_11075 PF01230 HIT domain NV385_11110 PF00005 ABC transporter NV385_11115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NV385_11125 PF02684 Lipid-A-disaccharide synthetase NV385_11130 PF07715 TonB-dependent Receptor Plug Domain NV385_11130 PF00593 TonB dependent receptor NV385_11150 PF01925 Sulfite exporter TauE/SafE NV385_11155 PF00793 DAHP synthetase I family NV385_11160 PF02654 Cobalamin-5-phosphate synthase NV385_11175 PF02277 Phosphoribosyltransferase NV385_11180 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NV385_11190 PF13419 Haloacid dehalogenase-like hydrolase NV385_11215 PF07715 TonB-dependent Receptor Plug Domain NV385_11215 PF00593 TonB dependent receptor NV385_11230 PF06276 Ferric iron reductase FhuF-like transporter NV385_11230 PF04183 IucA / IucC family NV385_11235 PF06276 Ferric iron reductase FhuF-like transporter NV385_11235 PF04183 IucA / IucC family NV385_11240 PF07690 Major Facilitator Superfamily NV385_11245 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NV385_11250 PF04183 IucA / IucC family NV385_11250 PF06276 Ferric iron reductase FhuF-like transporter NV385_11255 PF04073 Aminoacyl-tRNA editing domain NV385_11265 PF03109 ABC1 family NV385_11270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_11270 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_11270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_11275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_11275 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_11275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_11280 PF00487 Fatty acid desaturase NV385_11285 PF12833 Helix-turn-helix domain NV385_11285 PF12852 Cupin NV385_11290 PF00639 PPIC-type PPIASE domain NV385_11290 PF09312 SurA N-terminal domain NV385_11295 PF00216 Bacterial DNA-binding protein NV385_11310 PF02082 Transcriptional regulator NV385_11315 PF00266 Aminotransferase class-V NV385_11320 PF01592 NifU-like N terminal domain NV385_11325 PF01521 Iron-sulphur cluster biosynthesis NV385_11330 PF00226 DnaJ domain NV385_11330 PF07743 HSCB C-terminal oligomerisation domain NV385_11335 PF00012 Hsp70 protein NV385_11340 PF00111 2Fe-2S iron-sulfur cluster binding domain NV385_11345 PF00211 Adenylate and Guanylate cyclase catalytic domain NV385_11355 PF02559 CarD-like/TRCF domain NV385_11355 PF00270 DEAD/DEAH box helicase NV385_11355 PF00271 Helicase conserved C-terminal domain NV385_11355 PF03461 TRCF domain NV385_11355 PF17757 UvrB interaction domain NV385_11385 PF03737 Aldolase/RraA NV385_11390 PF13460 NAD(P)H-binding NV385_11395 PF01649 Ribosomal protein S20 NV385_11405 PF00459 Inositol monophosphatase family NV385_11420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NV385_11420 PF00005 ABC transporter NV385_11425 PF00528 Binding-protein-dependent transport system inner membrane component NV385_11430 PF00528 Binding-protein-dependent transport system inner membrane component NV385_11435 PF01432 Peptidase family M3 NV385_11455 PF00593 TonB dependent receptor NV385_11455 PF07715 TonB-dependent Receptor Plug Domain NV385_11465 PF01618 MotA/TolQ/ExbB proton channel family NV385_11470 PF02472 Biopolymer transport protein ExbD/TolR NV385_11475 PF02472 Biopolymer transport protein ExbD/TolR NV385_11485 PF01274 Malate synthase NV385_11490 PF03969 AFG1-like ATPase NV385_11500 PF00743 Flavin-binding monooxygenase-like NV385_11510 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NV385_11520 PF00216 Bacterial DNA-binding protein NV385_11525 PF00575 S1 RNA binding domain NV385_11530 PF02224 Cytidylate kinase NV385_11540 PF14437 MafB19-like deaminase NV385_11550 PF03167 Uracil DNA glycosylase superfamily NV385_11560 PF03934 Type II secretion system (T2SS), protein K NV385_11565 PF11612 Type II secretion system (T2SS), protein J NV385_11565 PF07963 Prokaryotic N-terminal methylation motif NV385_11570 PF07963 Prokaryotic N-terminal methylation motif NV385_11570 PF02501 Type II secretion system (T2SS), protein I NV385_11585 PF01026 TatD related DNase NV385_11595 PF09115 DNA polymerase III, delta subunit, C terminal NV385_11600 PF02348 Cytidylyltransferase NV385_11605 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NV385_11610 PF00005 ABC transporter NV385_11610 PF00664 ABC transporter transmembrane region NV385_11620 PF01618 MotA/TolQ/ExbB proton channel family NV385_11625 PF02195 ParB-like nuclease domain NV385_11625 PF17762 HTH domain found in ParB protein NV385_11630 PF13614 AAA domain NV385_11635 PF02527 rRNA small subunit methyltransferase G NV385_11640 PF00483 Nucleotidyl transferase NV385_11645 PF01636 Phosphotransferase enzyme family NV385_11650 PF03968 OstA-like protein NV385_11650 PF04453 LPS transport system D NV385_11655 PF09312 SurA N-terminal domain NV385_11655 PF00639 PPIC-type PPIASE domain NV385_11660 PF01116 Fructose-bisphosphate aldolase class-II NV385_11670 PF00162 Phosphoglycerate kinase NV385_11680 PF02545 Maf-like protein NV385_11685 PF08007 Cupin superfamily protein NV385_11700 PF00375 Sodium:dicarboxylate symporter family NV385_11705 PF06912 Protein of unknown function (DUF1275) NV385_11710 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) NV385_11715 PF00005 ABC transporter NV385_11715 PF00664 ABC transporter transmembrane region NV385_11725 PF12833 Helix-turn-helix domain NV385_11725 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NV385_11730 PF01597 Glycine cleavage H-protein NV385_11735 PF02146 Sir2 family NV385_11740 PF00474 Sodium:solute symporter family NV385_11745 PF01037 Lrp/AsnC ligand binding domain NV385_11750 PF01619 Proline dehydrogenase NV385_11750 PF14850 DNA-binding domain of Proline dehydrogenase NV385_11750 PF00171 Aldehyde dehydrogenase family NV385_11750 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NV385_11755 PF04229 GrpB protein NV385_11760 PF05958 tRNA (Uracil-5-)-methyltransferase NV385_11770 PF09992 Phosphodiester glycosidase NV385_11780 PF04264 YceI-like domain NV385_11790 PF00456 Transketolase, thiamine diphosphate binding domain NV385_11790 PF02780 Transketolase, C-terminal domain NV385_11790 PF02779 Transketolase, pyrimidine binding domain NV385_11795 PF02772 S-adenosylmethionine synthetase, central domain NV385_11795 PF00438 S-adenosylmethionine synthetase, N-terminal domain NV385_11795 PF02773 S-adenosylmethionine synthetase, C-terminal domain NV385_11815 PF00905 Penicillin binding protein transpeptidase domain NV385_11830 PF02075 Crossover junction endodeoxyribonuclease RuvC NV385_11835 PF01256 Carbohydrate kinase NV385_11835 PF03853 YjeF-related protein N-terminus NV385_11840 PF08331 Domain of unknown function (DUF1730) NV385_11845 PF04055 Radical SAM superfamily NV385_11845 PF06968 Biotin and Thiamin Synthesis associated domain NV385_11860 PF16970 Type-1 fimbrial protein, A NV385_11865 PF02753 Pili assembly chaperone PapD, C-terminal domain NV385_11865 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NV385_11870 PF00577 Outer membrane usher protein NV385_11870 PF13954 PapC N-terminal domain NV385_11870 PF13953 PapC C-terminal domain NV385_11890 PF00892 EamA-like transporter family NV385_11900 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NV385_11910 PF03466 LysR substrate binding domain NV385_11910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_11930 PF00440 Bacterial regulatory proteins, tetR family NV385_11940 PF01709 Transcriptional regulator NV385_11945 PF01037 Lrp/AsnC ligand binding domain NV385_11960 PF00005 ABC transporter NV385_11965 PF00528 Binding-protein-dependent transport system inner membrane component NV385_11970 PF00528 Binding-protein-dependent transport system inner membrane component NV385_11985 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NV385_11985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_11995 PF00296 Luciferase-like monooxygenase NV385_12000 PF03180 NLPA lipoprotein NV385_12005 PF03180 NLPA lipoprotein NV385_12010 PF09383 NIL domain NV385_12010 PF00005 ABC transporter NV385_12015 PF00528 Binding-protein-dependent transport system inner membrane component NV385_12020 PF06071 Protein of unknown function (DUF933) NV385_12020 PF01926 50S ribosome-binding GTPase NV385_12045 PF03591 AzlC protein NV385_12050 PF05437 Branched-chain amino acid transport protein (AzlD) NV385_12060 PF02222 ATP-grasp domain NV385_12065 PF01909 Nucleotidyltransferase domain NV385_12065 PF01966 HD domain NV385_12065 PF08335 GlnD PII-uridylyltransferase NV385_12070 PF00155 Aminotransferase class I and II NV385_12080 PF12852 Cupin NV385_12080 PF12833 Helix-turn-helix domain NV385_12085 PF00255 Glutathione peroxidase NV385_12090 PF01641 SelR domain NV385_12095 PF00155 Aminotransferase class I and II NV385_12100 PF00375 Sodium:dicarboxylate symporter family NV385_12105 PF17763 Glutaminase/Asparaginase C-terminal domain NV385_12105 PF00710 Asparaginase, N-terminal NV385_12110 PF07733 Bacterial DNA polymerase III alpha NTPase domain NV385_12110 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NV385_12110 PF14579 Helix-hairpin-helix motif NV385_12110 PF02811 PHP domain NV385_12110 PF01336 OB-fold nucleic acid binding domain NV385_12115 PF00588 SpoU rRNA Methylase family NV385_12120 PF00132 Bacterial transferase hexapeptide (six repeats) NV385_12135 PF13192 Thioredoxin domain NV385_12135 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_12150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_12150 PF03466 LysR substrate binding domain NV385_12155 PF01758 Sodium Bile acid symporter family NV385_12160 PF01022 Bacterial regulatory protein, arsR family NV385_12165 PF03960 ArsC family NV385_12175 PF13382 Adenine deaminase C-terminal domain NV385_12175 PF01979 Amidohydrolase family NV385_12185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_12185 PF03466 LysR substrate binding domain NV385_12195 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NV385_12200 PF01177 Asp/Glu/Hydantoin racemase NV385_12205 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NV385_12210 PF00528 Binding-protein-dependent transport system inner membrane component NV385_12215 PF00005 ABC transporter NV385_12220 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NV385_12230 PF00083 Sugar (and other) transporter NV385_12235 PF00296 Luciferase-like monooxygenase NV385_12240 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NV385_12240 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_12240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_12250 PF01654 Cytochrome bd terminal oxidase subunit I NV385_12255 PF02322 Cytochrome bd terminal oxidase subunit II NV385_12265 PF00392 Bacterial regulatory proteins, gntR family NV385_12265 PF00155 Aminotransferase class I and II NV385_12270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_12270 PF03466 LysR substrate binding domain NV385_12285 PF00698 Acyl transferase domain NV385_12290 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG NV385_12300 PF01039 Carboxyl transferase domain NV385_12305 PF06857 Malonate decarboxylase delta subunit (MdcD) NV385_12310 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NV385_12315 PF16957 Malonate decarboxylase, alpha subunit, transporter NV385_12320 PF07690 Major Facilitator Superfamily NV385_12335 PF00392 Bacterial regulatory proteins, gntR family NV385_12335 PF00155 Aminotransferase class I and II NV385_12340 PF04172 LrgB-like family NV385_12345 PF03788 LrgA family NV385_12350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_12350 PF03466 LysR substrate binding domain NV385_12355 PF14834 Glutathione S-transferase, C-terminal domain NV385_12355 PF02798 Glutathione S-transferase, N-terminal domain NV385_12360 PF02798 Glutathione S-transferase, N-terminal domain NV385_12365 PF03466 LysR substrate binding domain NV385_12365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_12375 PF00581 Rhodanese-like domain NV385_12380 PF00132 Bacterial transferase hexapeptide (six repeats) NV385_12390 PF00266 Aminotransferase class-V NV385_12400 PF01810 LysE type translocator NV385_12405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_12405 PF03466 LysR substrate binding domain NV385_12415 PF00497 Bacterial extracellular solute-binding proteins, family 3 NV385_12420 PF00497 Bacterial extracellular solute-binding proteins, family 3 NV385_12425 PF00005 ABC transporter NV385_12430 PF00528 Binding-protein-dependent transport system inner membrane component NV385_12435 PF00528 Binding-protein-dependent transport system inner membrane component NV385_12450 PF00072 Response regulator receiver domain NV385_12455 PF09308 LuxQ, periplasmic NV385_12455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_12455 PF00512 His Kinase A (phospho-acceptor) domain NV385_12455 PF00072 Response regulator receiver domain NV385_12465 PF13404 AsnC-type helix-turn-helix domain NV385_12465 PF01037 Lrp/AsnC ligand binding domain NV385_12475 PF00717 Peptidase S24-like NV385_12500 PF00199 Catalase NV385_12500 PF06628 Catalase-related immune-responsive NV385_12500 PF18011 C-terminal domain found in long catalases NV385_12510 PF02464 Competence-damaged protein NV385_12510 PF00994 Probable molybdopterin binding domain NV385_12510 PF18146 Damage-inducible protein CinA KH domain NV385_12545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_12545 PF03466 LysR substrate binding domain NV385_12570 PF13193 AMP-binding enzyme C-terminal domain NV385_12570 PF00501 AMP-binding enzyme NV385_12575 PF00440 Bacterial regulatory proteins, tetR family NV385_12580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_12580 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_12580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_12585 PF01039 Carboxyl transferase domain NV385_12590 PF00378 Enoyl-CoA hydratase/isomerase NV385_12595 PF02785 Biotin carboxylase C-terminal domain NV385_12595 PF00289 Biotin carboxylase, N-terminal domain NV385_12595 PF00364 Biotin-requiring enzyme NV385_12595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NV385_12595 PF18140 Propionyl-coenzyme A carboxylase BT domain NV385_12600 PF00682 HMGL-like NV385_12605 PF03466 LysR substrate binding domain NV385_12605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_12620 PF12806 Acetyl-CoA dehydrogenase C-terminal like NV385_12620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_12620 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_12620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_12630 PF07690 Major Facilitator Superfamily NV385_12640 PF01144 Coenzyme A transferase NV385_12645 PF01144 Coenzyme A transferase NV385_12650 PF07690 Major Facilitator Superfamily NV385_12655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_12655 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_12655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_12660 PF00378 Enoyl-CoA hydratase/isomerase NV385_12670 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NV385_12670 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NV385_12670 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NV385_12675 PF00108 Thiolase, N-terminal domain NV385_12675 PF02803 Thiolase, C-terminal domain NV385_12680 PF09339 IclR helix-turn-helix domain NV385_12685 PF07690 Major Facilitator Superfamily NV385_12690 PF03060 Nitronate monooxygenase NV385_12695 PF00378 Enoyl-CoA hydratase/isomerase NV385_12700 PF09339 IclR helix-turn-helix domain NV385_12705 PF02515 CoA-transferase family III NV385_12710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_12710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_12710 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_12715 PF07690 Major Facilitator Superfamily NV385_12720 PF13419 Haloacid dehalogenase-like hydrolase NV385_12725 PF00266 Aminotransferase class-V NV385_12730 PF01266 FAD dependent oxidoreductase NV385_12735 PF00528 Binding-protein-dependent transport system inner membrane component NV385_12740 PF00005 ABC transporter NV385_12740 PF08402 TOBE domain NV385_12750 PF00392 Bacterial regulatory proteins, gntR family NV385_12750 PF07702 UTRA domain NV385_12755 PF01494 FAD binding domain NV385_12760 PF09339 IclR helix-turn-helix domain NV385_12760 PF01614 Bacterial transcriptional regulator NV385_12765 PF02525 Flavodoxin-like fold NV385_12770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_12770 PF03466 LysR substrate binding domain NV385_12775 PF02627 Carboxymuconolactone decarboxylase family NV385_12780 PF00171 Aldehyde dehydrogenase family NV385_12790 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NV385_12800 PF00171 Aldehyde dehydrogenase family NV385_12805 PF00296 Luciferase-like monooxygenase NV385_12810 PF01613 Flavin reductase like domain NV385_12815 PF12697 Alpha/beta hydrolase family NV385_12825 PF13610 DDE domain NV385_12830 PF02796 Helix-turn-helix domain of resolvase NV385_12830 PF00239 Resolvase, N terminal domain NV385_12840 PF13610 DDE domain NV385_12850 PF02796 Helix-turn-helix domain of resolvase NV385_12850 PF00239 Resolvase, N terminal domain NV385_12855 PF13610 DDE domain NV385_12865 PF04958 Arginine N-succinyltransferase beta subunit NV385_12870 PF00202 Aminotransferase class-III NV385_12880 PF00171 Aldehyde dehydrogenase family NV385_12890 PF00392 Bacterial regulatory proteins, gntR family NV385_12890 PF07729 FCD domain NV385_12900 PF00324 Amino acid permease NV385_12905 PF01266 FAD dependent oxidoreductase NV385_12910 PF00324 Amino acid permease NV385_12950 PF05593 RHS Repeat NV385_12950 PF03527 RHS protein NV385_12955 PF13296 Putative type VI secretion system Rhs element Vgr NV385_12955 PF04717 Type VI secretion system, phage-baseplate injector NV385_12955 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NV385_12975 PF03180 NLPA lipoprotein NV385_12980 PF05987 Bacterial protein of unknown function (DUF898) NV385_12995 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_12995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NV385_13000 PF00764 Arginosuccinate synthase NV385_13005 PF01590 GAF domain NV385_13005 PF00360 Phytochrome region NV385_13005 PF00990 Diguanylate cyclase, GGDEF domain NV385_13005 PF00563 EAL domain NV385_13010 PF01979 Amidohydrolase family NV385_13015 PF00929 Exonuclease NV385_13025 PF07715 TonB-dependent Receptor Plug Domain NV385_13025 PF00593 TonB dependent receptor NV385_13030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NV385_13030 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_13035 PF00005 ABC transporter NV385_13035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NV385_13040 PF00528 Binding-protein-dependent transport system inner membrane component NV385_13040 PF12911 N-terminal TM domain of oligopeptide transport permease C NV385_13045 PF00528 Binding-protein-dependent transport system inner membrane component NV385_13050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NV385_13055 PF01464 Transglycosylase SLT domain NV385_13055 PF01476 LysM domain NV385_13055 PF01464 Transglycosylase SLT domain NV385_13055 PF01476 LysM domain NV385_13060 PF00929 Exonuclease NV385_13070 PF09297 NADH pyrophosphatase zinc ribbon domain NV385_13070 PF00293 NUDIX domain NV385_13080 PF04972 BON domain NV385_13085 PF02021 Uncharacterised protein family UPF0102 NV385_13090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NV385_13100 PF03466 LysR substrate binding domain NV385_13100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_13105 PF01810 LysE type translocator NV385_13115 PF13411 MerR HTH family regulatory protein NV385_13125 PF01494 FAD binding domain NV385_13130 PF01494 FAD binding domain NV385_13135 PF05195 Aminopeptidase P, N-terminal domain NV385_13135 PF00557 Metallopeptidase family M24 NV385_13175 PF08019 Phosphoethanolamine transferase EptA/EptB NV385_13175 PF00884 Sulfatase NV385_13220 PF01476 LysM domain NV385_13220 PF08525 Opacity-associated protein A N-terminal motif NV385_13220 PF01551 Peptidase family M23 NV385_13545 PF01812 5-formyltetrahydrofolate cyclo-ligase family NV385_13550 PF00691 OmpA family NV385_13550 PF04355 SmpA / OmlA family NV385_13555 PF05662 Coiled stalk of trimeric autotransporter adhesin NV385_13555 PF13018 Extended Signal Peptide of Type V secretion system NV385_13555 PF03895 YadA-like membrane anchor domain NV385_13555 PF05658 Head domain of trimeric autotransporter adhesin NV385_13560 PF05362 Lon protease (S16) C-terminal proteolytic domain NV385_13560 PF02190 ATP-dependent protease La (LON) substrate-binding domain NV385_13560 PF00004 ATPase family associated with various cellular activities (AAA) NV385_13565 PF02590 Predicted SPOUT methyltransferase NV385_13570 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NV385_13580 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NV385_13580 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NV385_13585 PF04060 Putative Fe-S cluster NV385_13590 PF00730 HhH-GPD superfamily base excision DNA repair protein NV385_13590 PF00633 Helix-hairpin-helix motif NV385_13590 PF10576 Iron-sulfur binding domain of endonuclease III NV385_13600 PF05191 Adenylate kinase, active site lid NV385_13615 PF00905 Penicillin binding protein transpeptidase domain NV385_13615 PF03717 Penicillin-binding Protein dimerisation domain NV385_13630 PF02492 CobW/HypB/UreG, nucleotide-binding domain NV385_13635 PF01730 UreF NV385_13640 PF05194 UreE urease accessory protein, C-terminal domain NV385_13640 PF02814 UreE urease accessory protein, N-terminal domain NV385_13645 PF00449 Urease alpha-subunit, N-terminal domain NV385_13645 PF01979 Amidohydrolase family NV385_13650 PF00699 Urease beta subunit NV385_13655 PF00547 Urease, gamma subunit NV385_13660 PF01774 UreD urease accessory protein NV385_13675 PF00463 Isocitrate lyase family NV385_13680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_13680 PF03466 LysR substrate binding domain NV385_13685 PF00571 CBS domain NV385_13685 PF03471 Transporter associated domain NV385_13685 PF01595 Cyclin M transmembrane N-terminal domain NV385_13690 PF03600 Citrate transporter NV385_13705 PF00009 Elongation factor Tu GTP binding domain NV385_13710 PF01507 Phosphoadenosine phosphosulfate reductase family NV385_13720 PF14052 Capsule assembly protein Wzi NV385_13725 PF00152 tRNA synthetases class II (D, K and N) NV385_13725 PF01336 OB-fold nucleic acid binding domain NV385_13740 PF00301 Rubredoxin NV385_13745 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_13745 PF18113 Rubredoxin binding C-terminal domain NV385_13750 PF00561 alpha/beta hydrolase fold NV385_13755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_13755 PF03466 LysR substrate binding domain NV385_13765 PF13089 Polyphosphate kinase N-terminal domain NV385_13765 PF17941 Polyphosphate kinase C-terminal domain 1 NV385_13765 PF13090 Polyphosphate kinase C-terminal domain 2 NV385_13765 PF02503 Polyphosphate kinase middle domain NV385_13770 PF00912 Transglycosylase NV385_13775 PF01694 Rhomboid family NV385_13785 PF00005 ABC transporter NV385_13790 PF13472 GDSL-like Lipase/Acylhydrolase family NV385_13795 PF00484 Carbonic anhydrase NV385_13800 PF00561 alpha/beta hydrolase fold NV385_13810 PF00593 TonB dependent receptor NV385_13810 PF07715 TonB-dependent Receptor Plug Domain NV385_13815 PF01521 Iron-sulphur cluster biosynthesis NV385_13815 PF01106 NifU-like domain NV385_13825 PF00884 Sulfatase NV385_13830 PF03781 Sulfatase-modifying factor enzyme 1 NV385_13845 PF00291 Pyridoxal-phosphate dependent enzyme NV385_13850 PF01384 Phosphate transporter family NV385_13855 PF02574 Homocysteine S-methyltransferase NV385_13855 PF02965 Vitamin B12 dependent methionine synthase, activation domain NV385_13855 PF00809 Pterin binding enzyme NV385_13855 PF02310 B12 binding domain NV385_13855 PF02607 B12 binding domain NV385_13860 PF02779 Transketolase, pyrimidine binding domain NV385_13860 PF02780 Transketolase, C-terminal domain NV385_13865 PF00456 Transketolase, thiamine diphosphate binding domain NV385_13870 PF07690 Major Facilitator Superfamily NV385_13880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_13880 PF03466 LysR substrate binding domain NV385_13890 PF01263 Aldose 1-epimerase NV385_13895 PF07690 Major Facilitator Superfamily NV385_13900 PF12833 Helix-turn-helix domain NV385_13900 PF02311 AraC-like ligand binding domain NV385_13905 PF04960 Glutaminase NV385_13910 PF01327 Polypeptide deformylase NV385_13915 PF07690 Major Facilitator Superfamily NV385_13925 PF00205 Thiamine pyrophosphate enzyme, central domain NV385_13925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NV385_13925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NV385_13930 PF00171 Aldehyde dehydrogenase family NV385_13935 PF01958 Domain of unknown function DUF108 NV385_13935 PF03447 Homoserine dehydrogenase, NAD binding domain NV385_13945 PF12697 Alpha/beta hydrolase family NV385_13955 PF07690 Major Facilitator Superfamily NV385_13960 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_13960 PF14759 Reductase C-terminal NV385_13965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NV385_13975 PF00355 Rieske [2Fe-2S] domain NV385_13985 PF00355 Rieske [2Fe-2S] domain NV385_13990 PF09339 IclR helix-turn-helix domain NV385_13990 PF01614 Bacterial transcriptional regulator NV385_14005 PF00378 Enoyl-CoA hydratase/isomerase NV385_14015 PF00535 Glycosyl transferase family 2 NV385_14020 PF14883 Hypothetical glycosyl hydrolase family 13 NV385_14020 PF01522 Polysaccharide deacetylase NV385_14025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NV385_14030 PF07152 YaeQ protein NV385_14035 PF00375 Sodium:dicarboxylate symporter family NV385_14040 PF02492 CobW/HypB/UreG, nucleotide-binding domain NV385_14040 PF07683 Cobalamin synthesis protein cobW C-terminal domain NV385_14050 PF03061 Thioesterase superfamily NV385_14060 PF02028 BCCT, betaine/carnitine/choline family transporter NV385_14065 PF02028 BCCT, betaine/carnitine/choline family transporter NV385_14070 PF13977 BetI-type transcriptional repressor, C-terminal NV385_14070 PF00440 Bacterial regulatory proteins, tetR family NV385_14075 PF00171 Aldehyde dehydrogenase family NV385_14080 PF05199 GMC oxidoreductase NV385_14080 PF00732 GMC oxidoreductase NV385_14085 PF06039 Malate:quinone oxidoreductase (Mqo) NV385_14095 PF02574 Homocysteine S-methyltransferase NV385_14100 PF13520 Amino acid permease NV385_14125 PF01126 Heme oxygenase NV385_14135 PF04575 Protein of unknown function (DUF560) NV385_14145 PF00593 TonB dependent receptor NV385_14145 PF07715 TonB-dependent Receptor Plug Domain NV385_14155 PF04542 Sigma-70 region 2 NV385_14155 PF08281 Sigma-70, region 4 NV385_14165 PF00701 Dihydrodipicolinate synthetase family NV385_14170 PF00083 Sugar (and other) transporter NV385_14190 PF01026 TatD related DNase NV385_14205 PF07693 KAP family P-loop domain NV385_14225 PF00436 Single-strand binding protein family NV385_14280 PF00589 Phage integrase family NV385_14280 PF13356 Arm DNA-binding domain NV385_14320 PF10544 T5orf172 domain NV385_14325 PF13614 AAA domain NV385_14345 PF00905 Penicillin binding protein transpeptidase domain NV385_14425 PF05016 ParE toxin of type II toxin-antitoxin system, parDE NV385_14575 PF07007 Lysozyme inhibitor LprI NV385_14620 PF01695 IstB-like ATP binding protein NV385_14630 PF00145 C-5 cytosine-specific DNA methylase NV385_14675 PF00717 Peptidase S24-like NV385_14675 PF01381 Helix-turn-helix NV385_14710 PF00929 Exonuclease NV385_14785 PF07690 Major Facilitator Superfamily NV385_14790 PF13533 Biotin-lipoyl like NV385_14795 PF03061 Thioesterase superfamily NV385_14800 PF00490 Delta-aminolevulinic acid dehydratase NV385_14805 PF01266 FAD dependent oxidoreductase NV385_14810 PF08338 Domain of unknown function (DUF1731) NV385_14810 PF01370 NAD dependent epimerase/dehydratase family NV385_14830 PF12320 Type 5 capsule protein repressor C-terminal domain NV385_14830 PF00149 Calcineurin-like phosphoesterase NV385_14840 PF01168 Alanine racemase, N-terminal domain NV385_14845 PF00437 Type II/IV secretion system protein NV385_14850 PF00437 Type II/IV secretion system protein NV385_14855 PF01475 Ferric uptake regulator family NV385_14860 PF04355 SmpA / OmlA family NV385_14865 PF03658 RnfH family Ubiquitin NV385_14875 PF01814 Hemerythrin HHE cation binding domain NV385_14880 PF13230 Glutamine amidotransferases class-II NV385_14890 PF00696 Amino acid kinase family NV385_14895 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NV385_14895 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NV385_14895 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NV385_14895 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NV385_14900 PF00692 dUTPase NV385_14905 PF00580 UvrD/REP helicase N-terminal domain NV385_14905 PF13361 UvrD-like helicase C-terminal domain NV385_14910 PF00691 OmpA family NV385_14910 PF13488 Glycine zipper NV385_14915 PF01553 Acyltransferase NV385_14925 PF03775 Septum formation inhibitor MinC, C-terminal domain NV385_14930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NV385_14935 PF03776 Septum formation topological specificity factor MinE NV385_14955 PF01810 LysE type translocator NV385_14960 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NV385_14960 PF01580 FtsK/SpoIIIE family NV385_14960 PF17854 FtsK alpha domain NV385_14960 PF09397 Ftsk gamma domain NV385_14965 PF07992 Pyridine nucleotide-disulphide oxidoreductase NV385_14970 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NV385_14975 PF04377 Arginine-tRNA-protein transferase, C terminus NV385_14975 PF04376 Arginine-tRNA-protein transferase, N terminus NV385_14980 PF00583 Acetyltransferase (GNAT) family NV385_14995 PF00009 Elongation factor Tu GTP binding domain NV385_14995 PF03144 Elongation factor Tu domain 2 NV385_14995 PF03143 Elongation factor Tu C-terminal domain NV385_15000 PF00679 Elongation factor G C-terminus NV385_15000 PF14492 Elongation Factor G, domain II NV385_15000 PF03764 Elongation factor G, domain IV NV385_15000 PF00009 Elongation factor Tu GTP binding domain NV385_15000 PF03144 Elongation factor Tu domain 2 NV385_15005 PF00177 Ribosomal protein S7p/S5e NV385_15010 PF00164 Ribosomal protein S12/S23 NV385_15020 PF00109 Beta-ketoacyl synthase, N-terminal domain NV385_15020 PF02801 Beta-ketoacyl synthase, C-terminal domain NV385_15025 PF03653 Uncharacterised protein family (UPF0093) NV385_15030 PF02678 Pirin NV385_15030 PF05726 Pirin C-terminal cupin domain NV385_15040 PF00795 Carbon-nitrogen hydrolase NV385_15040 PF02540 NAD synthase NV385_15055 PF00970 Oxidoreductase FAD-binding domain NV385_15055 PF00111 2Fe-2S iron-sulfur cluster binding domain NV385_15055 PF00175 Oxidoreductase NAD-binding domain NV385_15060 PF00171 Aldehyde dehydrogenase family NV385_15065 PF00355 Rieske [2Fe-2S] domain NV385_15065 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NV385_15070 PF07859 alpha/beta hydrolase fold NV385_15075 PF02028 BCCT, betaine/carnitine/choline family transporter NV385_15080 PF00180 Isocitrate/isopropylmalate dehydrogenase NV385_15085 PF03466 LysR substrate binding domain NV385_15085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_15105 PF00037 4Fe-4S binding domain NV385_15110 PF01467 Cytidylyltransferase-like NV385_15115 PF01668 SmpB protein NV385_15120 PF03358 NADPH-dependent FMN reductase NV385_15125 PF02578 Multi-copper polyphenol oxidoreductase laccase NV385_15130 PF00849 RNA pseudouridylate synthase NV385_15130 PF01479 S4 domain NV385_15135 PF13525 Outer membrane lipoprotein NV385_15140 PF10410 DnaB-helicase binding domain of primase NV385_15140 PF08278 DNA primase DnaG DnaB-binding NV385_15140 PF08275 DNA primase catalytic core, N-terminal domain NV385_15140 PF01807 CHC2 zinc finger NV385_15145 PF01488 Shikimate / quinate 5-dehydrogenase NV385_15145 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NV385_15145 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NV385_15155 PF03550 Outer membrane lipoprotein LolB NV385_15160 PF00288 GHMP kinases N terminal domain NV385_15160 PF08544 GHMP kinases C terminal NV385_15185 PF14572 Phosphoribosyl synthetase-associated domain NV385_15185 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NV385_15190 PF01386 Ribosomal L25p family NV385_15195 PF01195 Peptidyl-tRNA hydrolase NV385_15200 PF02261 Aspartate decarboxylase NV385_15215 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NV385_15225 PF02581 Thiamine monophosphate synthase NV385_15225 PF08543 Phosphomethylpyrimidine kinase NV385_15225 PF03070 TENA/THI-4/PQQC family NV385_15230 PF04972 BON domain NV385_15230 PF01476 LysM domain NV385_15235 PF00550 Phosphopantetheine attachment site NV385_15245 PF00698 Acyl transferase domain NV385_15250 PF01783 Ribosomal L32p protein family NV385_15255 PF02620 Large ribosomal RNA subunit accumulation protein YceD NV385_15260 PF04315 Elongation factor P hydroxylase NV385_15265 PF01300 Telomere recombination NV385_15270 PF02616 Segregation and condensation protein ScpA NV385_15275 PF04079 Segregation and condensation complex subunit ScpB NV385_15280 PF00849 RNA pseudouridylate synthase NV385_15280 PF01479 S4 domain NV385_15295 PF00155 Aminotransferase class I and II NV385_15300 PF04055 Radical SAM superfamily NV385_15300 PF00202 Aminotransferase class-III NV385_15300 PF06968 Biotin and Thiamin Synthesis associated domain NV385_15305 PF12697 Alpha/beta hydrolase family NV385_15305 PF08241 Methyltransferase domain NV385_15310 PF02358 Trehalose-phosphatase NV385_15315 PF00982 Glycosyltransferase family 20 NV385_15320 PF07690 Major Facilitator Superfamily NV385_15325 PF00210 Ferritin-like domain NV385_15330 PF00533 BRCA1 C Terminus (BRCT) domain NV385_15330 PF01653 NAD-dependent DNA ligase adenylation domain NV385_15330 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NV385_15330 PF12826 Helix-hairpin-helix motif NV385_15330 PF03120 NAD-dependent DNA ligase OB-fold domain NV385_15340 PF06470 SMC proteins Flexible Hinge Domain NV385_15340 PF02463 RecF/RecN/SMC N terminal domain NV385_15350 PF01925 Sulfite exporter TauE/SafE NV385_15360 PF03309 Type III pantothenate kinase NV385_15365 PF00448 SRP54-type protein, GTPase domain NV385_15365 PF02881 SRP54-type protein, helical bundle domain NV385_15365 PF02978 Signal peptide binding domain NV385_15375 PF01207 Dihydrouridine synthase (Dus) NV385_15415 PF00692 dUTPase NV385_15430 PF01048 Phosphorylase superfamily NV385_15435 PF10609 NUBPL iron-transfer P-loop NTPase NV385_15445 PF09334 tRNA synthetases class I (M) NV385_15445 PF01588 Putative tRNA binding domain NV385_15470 PF13533 Biotin-lipoyl like NV385_15475 PF00291 Pyridoxal-phosphate dependent enzyme NV385_15490 PF05552 Conserved TM helix NV385_15505 PF00970 Oxidoreductase FAD-binding domain NV385_15505 PF00175 Oxidoreductase NAD-binding domain NV385_15510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_15510 PF03466 LysR substrate binding domain NV385_15515 PF00313 'Cold-shock' DNA-binding domain NV385_15525 PF00361 Proton-conducting membrane transporter NV385_15530 PF00361 Proton-conducting membrane transporter NV385_15535 PF00361 Proton-conducting membrane transporter NV385_15535 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NV385_15540 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NV385_15545 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NV385_15550 PF12838 4Fe-4S dicluster domain NV385_15555 PF00146 NADH dehydrogenase NV385_15560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NV385_15560 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NV385_15560 PF00384 Molybdopterin oxidoreductase NV385_15565 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NV385_15565 PF10531 SLBB domain NV385_15565 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NV385_15575 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NV385_15575 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NV385_15580 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NV385_15585 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NV385_15590 PF00990 Diguanylate cyclase, GGDEF domain NV385_15590 PF17151 Periplasmic sensor domain NV385_15600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_15600 PF00672 HAMP domain NV385_15600 PF00512 His Kinase A (phospho-acceptor) domain NV385_15605 PF00486 Transcriptional regulatory protein, C terminal NV385_15605 PF00072 Response regulator receiver domain NV385_15615 PF00317 Ribonucleotide reductase, all-alpha domain NV385_15615 PF02867 Ribonucleotide reductase, barrel domain NV385_15615 PF03477 ATP cone domain NV385_15625 PF00268 Ribonucleotide reductase, small chain NV385_15635 PF00512 His Kinase A (phospho-acceptor) domain NV385_15635 PF00672 HAMP domain NV385_15635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_15635 PF13755 Sensor N-terminal transmembrane domain NV385_15635 PF13756 Stimulus-sensing domain NV385_15705 PF13360 PQQ-like domain NV385_15705 PF01011 PQQ enzyme repeat NV385_15730 PF02567 Phenazine biosynthesis-like protein NV385_15755 PF01613 Flavin reductase like domain NV385_15760 PF08267 Cobalamin-independent synthase, N-terminal domain NV385_15760 PF01717 Cobalamin-independent synthase, Catalytic domain NV385_15770 PF03466 LysR substrate binding domain NV385_15770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_15775 PF01810 LysE type translocator NV385_15785 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NV385_15785 PF12833 Helix-turn-helix domain NV385_15790 PF07687 Peptidase dimerisation domain NV385_15790 PF01546 Peptidase family M20/M25/M40 NV385_15800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_15800 PF03466 LysR substrate binding domain NV385_15805 PF07690 Major Facilitator Superfamily NV385_15815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_15815 PF03466 LysR substrate binding domain NV385_15820 PF14537 Cytochrome c3 NV385_15820 PF00890 FAD binding domain NV385_15830 PF02515 CoA-transferase family III NV385_15835 PF07690 Major Facilitator Superfamily NV385_15840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_15840 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_15840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_15845 PF03466 LysR substrate binding domain NV385_15845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_15850 PF08240 Alcohol dehydrogenase GroES-like domain NV385_15850 PF00107 Zinc-binding dehydrogenase NV385_15855 PF00962 Adenosine/AMP deaminase NV385_15880 PF02445 Quinolinate synthetase A protein NV385_15885 PF01960 ArgJ family NV385_15890 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NV385_15890 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NV385_15895 PF00893 Small Multidrug Resistance protein NV385_15905 PF05275 Copper resistance protein B precursor (CopB) NV385_15910 PF07732 Multicopper oxidase NV385_15910 PF07731 Multicopper oxidase NV385_15910 PF00394 Multicopper oxidase NV385_15925 PF00834 Ribulose-phosphate 3 epimerase family NV385_15935 PF00756 Putative esterase NV385_15945 PF04445 Putative SAM-dependent methyltransferase NV385_15950 PF00814 Glycoprotease family NV385_15955 PF00132 Bacterial transferase hexapeptide (six repeats) NV385_15960 PF00293 NUDIX domain NV385_16000 PF00425 chorismate binding enzyme NV385_16000 PF04715 Anthranilate synthase component I, N terminal region NV385_16005 PF00155 Aminotransferase class I and II NV385_16010 PF00815 Histidinol dehydrogenase NV385_16015 PF01634 ATP phosphoribosyltransferase NV385_16020 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NV385_16025 PF01722 BolA-like protein NV385_16030 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NV385_16035 PF00309 Sigma-54 factor, Activator interacting domain (AID) NV385_16035 PF04552 Sigma-54, DNA binding domain NV385_16035 PF04963 Sigma-54 factor, core binding domain NV385_16080 PF00795 Carbon-nitrogen hydrolase NV385_16090 PF01047 MarR family NV385_16095 PF02566 OsmC-like protein NV385_16100 PF00437 Type II/IV secretion system protein NV385_16120 PF01367 5'-3' exonuclease, C-terminal SAM fold NV385_16120 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NV385_16120 PF00476 DNA polymerase family A NV385_16120 PF01612 3'-5' exonuclease NV385_16125 PF02325 YGGT family NV385_16130 PF14748 Pyrroline-5-carboxylate reductase dimerisation NV385_16130 PF03807 NADP oxidoreductase coenzyme F420-dependent NV385_16135 PF11734 TilS substrate C-terminal domain NV385_16135 PF09179 TilS substrate binding domain NV385_16135 PF01171 PP-loop family NV385_16140 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NV385_16145 PF02541 Ppx/GppA phosphatase family NV385_16150 PF00085 Thioredoxin NV385_16155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NV385_16155 PF07498 Rho termination factor, N-terminal domain NV385_16155 PF07497 Rho termination factor, RNA-binding domain NV385_16170 PF00216 Bacterial DNA-binding protein NV385_16175 PF01588 Putative tRNA binding domain NV385_16175 PF03147 Ferredoxin-fold anticodon binding domain NV385_16175 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NV385_16175 PF03483 B3/4 domain NV385_16175 PF03484 tRNA synthetase B5 domain NV385_16180 PF01409 tRNA synthetases class II core domain (F) NV385_16180 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NV385_16200 PF00453 Ribosomal protein L20 NV385_16205 PF01632 Ribosomal protein L35 NV385_16215 PF07690 Major Facilitator Superfamily NV385_16220 PF09335 SNARE associated Golgi protein NV385_16225 PF00043 Glutathione S-transferase, C-terminal domain NV385_16225 PF02798 Glutathione S-transferase, N-terminal domain NV385_16230 PF00707 Translation initiation factor IF-3, C-terminal domain NV385_16230 PF05198 Translation initiation factor IF-3, N-terminal domain NV385_16235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NV385_16235 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NV385_16235 PF03129 Anticodon binding domain NV385_16235 PF02824 TGS domain NV385_16240 PF13193 AMP-binding enzyme C-terminal domain NV385_16240 PF00501 AMP-binding enzyme NV385_16245 PF04751 Protein of unknown function (DUF615) NV385_16250 PF00381 PTS HPr component phosphorylation site NV385_16255 PF03668 P-loop ATPase protein family NV385_16260 PF02569 Pantoate-beta-alanine ligase NV385_16265 PF02548 Ketopantoate hydroxymethyltransferase NV385_16270 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NV385_16275 PF01743 Poly A polymerase head domain NV385_16275 PF12626 Polymerase A arginine-rich C-terminus NV385_16275 PF12627 Probable RNA and SrmB- binding site of polymerase A NV385_16285 PF03819 MazG nucleotide pyrophosphohydrolase domain NV385_16295 PF13291 ACT domain NV385_16295 PF04607 Region found in RelA / SpoT proteins NV385_16295 PF02824 TGS domain NV385_16300 PF05958 tRNA (Uracil-5-)-methyltransferase NV385_16310 PF00291 Pyridoxal-phosphate dependent enzyme NV385_16315 PF00672 HAMP domain NV385_16315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_16315 PF00512 His Kinase A (phospho-acceptor) domain NV385_16315 PF01627 Hpt domain NV385_16315 PF00072 Response regulator receiver domain NV385_16315 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NV385_16320 PF00378 Enoyl-CoA hydratase/isomerase NV385_16325 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NV385_16325 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NV385_16330 PF01261 Xylose isomerase-like TIM barrel NV385_16340 PF00106 short chain dehydrogenase NV385_16345 PF02233 NAD(P) transhydrogenase beta subunit NV385_16350 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NV385_16355 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NV385_16355 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NV385_16360 PF00892 EamA-like transporter family NV385_16370 PF07690 Major Facilitator Superfamily NV385_16375 PF01207 Dihydrouridine synthase (Dus) NV385_16385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_16385 PF03466 LysR substrate binding domain NV385_16395 PF00899 ThiF family NV385_16405 PF00330 Aconitase family (aconitate hydratase) NV385_16405 PF00694 Aconitase C-terminal domain NV385_16410 PF01026 TatD related DNase NV385_16425 PF00009 Elongation factor Tu GTP binding domain NV385_16425 PF03144 Elongation factor Tu domain 2 NV385_16425 PF16658 Class II release factor RF3, C-terminal domain NV385_16445 PF00563 EAL domain NV385_16445 PF03707 Bacterial signalling protein N terminal repeat NV385_16445 PF00990 Diguanylate cyclase, GGDEF domain NV385_16450 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NV385_16450 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NV385_16455 PF10369 Small subunit of acetolactate synthase NV385_16460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NV385_16460 PF00205 Thiamine pyrophosphate enzyme, central domain NV385_16460 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NV385_16470 PF08264 Anticodon-binding domain of tRNA NV385_16470 PF00133 tRNA synthetases class I (I, L, M and V) NV385_16470 PF13603 Leucyl-tRNA synthetase, Domain 2 NV385_16470 PF09334 tRNA synthetases class I (M) NV385_16485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NV385_16490 PF02687 FtsX-like permease family NV385_16490 PF12704 MacB-like periplasmic core domain NV385_16490 PF00005 ABC transporter NV385_16495 PF02321 Outer membrane efflux protein NV385_16510 PF00929 Exonuclease NV385_16515 PF03193 RsgA GTPase NV385_16525 PF00462 Glutaredoxin NV385_16530 PF02556 Preprotein translocase subunit SecB NV385_16545 PF02801 Beta-ketoacyl synthase, C-terminal domain NV385_16545 PF00109 Beta-ketoacyl synthase, N-terminal domain NV385_16560 PF02801 Beta-ketoacyl synthase, C-terminal domain NV385_16560 PF00109 Beta-ketoacyl synthase, N-terminal domain NV385_16570 PF04820 Tryptophan halogenase NV385_16590 PF00221 Aromatic amino acid lyase NV385_16605 PF13193 AMP-binding enzyme C-terminal domain NV385_16605 PF00501 AMP-binding enzyme NV385_16615 PF00550 Phosphopantetheine attachment site NV385_16620 PF00550 Phosphopantetheine attachment site NV385_16635 PF01926 50S ribosome-binding GTPase NV385_16635 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NV385_16640 PF13360 PQQ-like domain NV385_16650 PF13393 Histidyl-tRNA synthetase NV385_16650 PF03129 Anticodon binding domain NV385_16655 PF04551 GcpE protein NV385_16660 PF13464 Domain of unknown function (DUF4115) NV385_16670 PF04055 Radical SAM superfamily NV385_16675 PF00334 Nucleoside diphosphate kinase NV385_16680 PF04384 Iron-sulphur cluster assembly NV385_16685 PF01569 PAP2 superfamily NV385_16690 PF13439 Glycosyltransferase Family 4 NV385_16690 PF00534 Glycosyl transferases group 1 NV385_16695 PF11818 C-terminal domain of tail specific protease (DUF3340) NV385_16695 PF00595 PDZ domain NV385_16695 PF03572 Peptidase family S41 NV385_16695 PF17804 Tail specific protease N-terminal domain NV385_16700 PF00933 Glycosyl hydrolase family 3 N terminal domain NV385_16710 PF00561 alpha/beta hydrolase fold NV385_16715 PF00171 Aldehyde dehydrogenase family NV385_16720 PF00171 Aldehyde dehydrogenase family NV385_16725 PF01202 Shikimate kinase NV385_16730 PF02447 GntP family permease NV385_16735 PF01081 KDPG and KHG aldolase NV385_16740 PF00920 Dehydratase family NV385_16745 PF00871 Acetokinase family NV385_16750 PF07085 DRTGG domain NV385_16750 PF01515 Phosphate acetyl/butaryl transferase NV385_16755 PF05681 Fumarate hydratase (Fumerase) NV385_16755 PF05683 Fumarase C-terminus NV385_16770 PF07724 AAA domain (Cdc48 subfamily) NV385_16770 PF10431 C-terminal, D2-small domain, of ClpB protein NV385_16770 PF06689 ClpX C4-type zinc finger NV385_16775 PF00574 Clp protease NV385_16780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NV385_16780 PF05698 Bacterial trigger factor protein (TF) C-terminus NV385_16780 PF05697 Bacterial trigger factor protein (TF) NV385_16785 PF00593 TonB dependent receptor NV385_16785 PF07715 TonB-dependent Receptor Plug Domain NV385_16790 PF13640 2OG-Fe(II) oxygenase superfamily NV385_16790 PF18331 PKHD-type hydroxylase C-terminal domain NV385_16795 PF00682 HMGL-like NV385_16795 PF08502 LeuA allosteric (dimerisation) domain NV385_16800 PF00561 alpha/beta hydrolase fold NV385_16805 PF00561 alpha/beta hydrolase fold NV385_16805 PF07021 Methionine biosynthesis protein MetW NV385_16815 PF01725 Ham1 family NV385_16825 PF02416 mttA/Hcf106 family NV385_16830 PF02416 mttA/Hcf106 family NV385_16835 PF00902 Sec-independent protein translocase protein (TatC) NV385_16855 PF01790 Prolipoprotein diacylglyceryl transferase NV385_16870 PF00303 Thymidylate synthase NV385_16875 PF00186 Dihydrofolate reductase NV385_16885 PF01625 Peptide methionine sulfoxide reductase NV385_16895 PF01618 MotA/TolQ/ExbB proton channel family NV385_16905 PF00551 Formyl transferase NV385_16905 PF01842 ACT domain NV385_16915 PF00171 Aldehyde dehydrogenase family NV385_16920 PF00830 Ribosomal L28 family NV385_16925 PF00471 Ribosomal protein L33 NV385_16930 PF02254 TrkA-N domain NV385_16930 PF00999 Sodium/hydrogen exchanger family NV385_16950 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NV385_16955 PF00580 UvrD/REP helicase N-terminal domain NV385_16955 PF13361 UvrD-like helicase C-terminal domain NV385_16970 PF08272 Topoisomerase I zinc-ribbon-like NV385_16970 PF01131 DNA topoisomerase NV385_16970 PF01751 Toprim domain NV385_16970 PF01396 Topoisomerase DNA binding C4 zinc finger NV385_16980 PF01638 HxlR-like helix-turn-helix NV385_16985 PF08240 Alcohol dehydrogenase GroES-like domain NV385_16985 PF00107 Zinc-binding dehydrogenase NV385_16990 PF04102 SlyX NV385_16995 PF00005 ABC transporter NV385_16995 PF16326 ABC transporter C-terminal domain NV385_16995 PF12848 ABC transporter NV385_17000 PF01810 LysE type translocator NV385_17005 PF03279 Bacterial lipid A biosynthesis acyltransferase NV385_17015 PF00375 Sodium:dicarboxylate symporter family NV385_17025 PF01118 Semialdehyde dehydrogenase, NAD binding domain NV385_17025 PF02774 Semialdehyde dehydrogenase, dimerisation domain NV385_17045 PF01416 tRNA pseudouridine synthase NV385_17055 PF01176 Translation initiation factor 1A / IF-1 NV385_17070 PF00180 Isocitrate/isopropylmalate dehydrogenase NV385_17080 PF00694 Aconitase C-terminal domain NV385_17085 PF00330 Aconitase family (aconitate hydratase) NV385_17095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_17095 PF03466 LysR substrate binding domain NV385_17105 PF00872 Transposase, Mutator family NV385_17120 PF00293 NUDIX domain NV385_17125 PF01590 GAF domain NV385_17125 PF05524 PEP-utilising enzyme, N-terminal NV385_17125 PF00391 PEP-utilising enzyme, mobile domain NV385_17125 PF02896 PEP-utilising enzyme, TIM barrel domain NV385_17130 PF00141 Peroxidase NV385_17135 PF12706 Beta-lactamase superfamily domain NV385_17140 PF03466 LysR substrate binding domain NV385_17140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_17150 PF02798 Glutathione S-transferase, N-terminal domain NV385_17155 PF08279 HTH domain NV385_17155 PF13280 WYL domain NV385_17160 PF13419 Haloacid dehalogenase-like hydrolase NV385_17170 PF12111 Polyribonucleotide phosphorylase C terminal NV385_17170 PF10150 Ribonuclease E/G family NV385_17170 PF00575 S1 RNA binding domain NV385_17175 PF13193 AMP-binding enzyme C-terminal domain NV385_17175 PF00501 AMP-binding enzyme NV385_17190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_17190 PF03466 LysR substrate binding domain NV385_17195 PF00106 short chain dehydrogenase NV385_17200 PF06969 HemN C-terminal domain NV385_17200 PF04055 Radical SAM superfamily NV385_17210 PF01554 MatE NV385_17215 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_17215 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NV385_17215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_17220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_17220 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NV385_17225 PF03109 ABC1 family NV385_17230 PF01197 Ribosomal protein L31 NV385_17245 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NV385_17265 PF03884 DNA gyrase inhibitor YacG NV385_17270 PF00753 Metallo-beta-lactamase superfamily NV385_17275 PF00762 Ferrochelatase NV385_17285 PF01177 Asp/Glu/Hydantoin racemase NV385_17300 PF01206 Sulfurtransferase TusA NV385_17305 PF00571 CBS domain NV385_17305 PF03471 Transporter associated domain NV385_17310 PF00795 Carbon-nitrogen hydrolase NV385_17315 PF01588 Putative tRNA binding domain NV385_17325 PF07963 Prokaryotic N-terminal methylation motif NV385_17325 PF08334 Type II secretion system (T2SS), protein G NV385_17330 PF00482 Type II secretion system (T2SS), protein F NV385_17335 PF00271 Helicase conserved C-terminal domain NV385_17335 PF00270 DEAD/DEAH box helicase NV385_17335 PF17764 3′ DNA-binding domain (3′BD) NV385_17335 PF18074 Primosomal protein N C-terminal domain NV385_17335 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NV385_17340 PF00999 Sodium/hydrogen exchanger family NV385_17340 PF02254 TrkA-N domain NV385_17345 PF01430 Hsp33 protein NV385_17355 PF00226 DnaJ domain NV385_17355 PF01556 DnaJ C terminal domain NV385_17365 PF01544 CorA-like Mg2+ transporter protein NV385_17370 PF00575 S1 RNA binding domain NV385_17370 PF03725 3' exoribonuclease family, domain 2 NV385_17370 PF01138 3' exoribonuclease family, domain 1 NV385_17370 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NV385_17370 PF00013 KH domain NV385_17375 PF00312 Ribosomal protein S15 NV385_17380 PF00144 Beta-lactamase NV385_17385 PF13538 UvrD-like helicase C-terminal domain NV385_17390 PF13361 UvrD-like helicase C-terminal domain NV385_17390 PF12705 PD-(D/E)XK nuclease superfamily NV385_17390 PF00580 UvrD/REP helicase N-terminal domain NV385_17395 PF17946 RecC C-terminal domain NV385_17405 PF03976 Polyphosphate kinase 2 (PPK2) NV385_17415 PF01209 ubiE/COQ5 methyltransferase family NV385_17425 PF03109 ABC1 family NV385_17430 PF01494 FAD binding domain NV385_17435 PF01502 Phosphoribosyl-AMP cyclohydrolase NV385_17450 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NV385_17450 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NV385_17450 PF13244 Domain of unknown function (DUF4040) NV385_17450 PF00361 Proton-conducting membrane transporter NV385_17455 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NV385_17460 PF00361 Proton-conducting membrane transporter NV385_17465 PF01899 Na+/H+ ion antiporter subunit NV385_17470 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NV385_17475 PF03334 Na+/H+ antiporter subunit NV385_17480 PF02033 Ribosome-binding factor A NV385_17485 PF00009 Elongation factor Tu GTP binding domain NV385_17485 PF08364 Bacterial translation initiation factor IF-2 associated region NV385_17485 PF11987 Translation-initiation factor 2 NV385_17485 PF04760 Translation initiation factor IF-2, N-terminal region NV385_17490 PF08529 NusA N-terminal domain NV385_17490 PF00575 S1 RNA binding domain NV385_17490 PF13184 NusA-like KH domain NV385_17495 PF02576 RimP N-terminal domain NV385_17495 PF17384 RimP C-terminal SH3 domain NV385_17515 PF03840 Preprotein translocase SecG subunit NV385_17520 PF00121 Triosephosphate isomerase NV385_17525 PF00437 Type II/IV secretion system protein NV385_17525 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NV385_17530 PF00482 Type II secretion system (T2SS), protein F NV385_17535 PF01478 Type IV leader peptidase family NV385_17535 PF06750 Bacterial Peptidase A24 N-terminal domain NV385_17540 PF01121 Dephospho-CoA kinase NV385_17550 PF00588 SpoU rRNA Methylase family NV385_17550 PF08032 RNA 2'-O ribose methyltransferase substrate binding NV385_17555 PF06865 Pyrimidine/purine nucleoside phosphorylase NV385_17565 PF02463 RecF/RecN/SMC N terminal domain NV385_17570 PF02622 Uncharacterized ACR, COG1678 NV385_17575 PF03652 Holliday junction resolvase NV385_17580 PF13533 Biotin-lipoyl like NV385_17605 PF12833 Helix-turn-helix domain NV385_17605 PF02805 Metal binding domain of Ada NV385_17605 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NV385_17605 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NV385_17610 PF01066 CDP-alcohol phosphatidyltransferase NV385_17620 PF01541 GIY-YIG catalytic domain NV385_17620 PF02151 UvrB/uvrC motif NV385_17620 PF08459 UvrC Helix-hairpin-helix N-terminal NV385_17640 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NV385_17640 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NV385_17640 PF00378 Enoyl-CoA hydratase/isomerase NV385_17645 PF02803 Thiolase, C-terminal domain NV385_17645 PF00108 Thiolase, N-terminal domain NV385_17665 PF09278 MerR, DNA binding NV385_17665 PF00376 MerR family regulatory protein NV385_17675 PF01323 DSBA-like thioredoxin domain NV385_17690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_17690 PF00183 Hsp90 protein NV385_17705 PF13726 Na+-H+ antiporter family NV385_17705 PF03553 Na+/H+ antiporter family NV385_17710 PF00561 alpha/beta hydrolase fold NV385_17730 PF04983 RNA polymerase Rpb1, domain 3 NV385_17730 PF04997 RNA polymerase Rpb1, domain 1 NV385_17730 PF04998 RNA polymerase Rpb1, domain 5 NV385_17730 PF05000 RNA polymerase Rpb1, domain 4 NV385_17730 PF00623 RNA polymerase Rpb1, domain 2 NV385_17735 PF04560 RNA polymerase Rpb2, domain 7 NV385_17735 PF00562 RNA polymerase Rpb2, domain 6 NV385_17735 PF10385 RNA polymerase beta subunit external 1 domain NV385_17735 PF04561 RNA polymerase Rpb2, domain 2 NV385_17735 PF04565 RNA polymerase Rpb2, domain 3 NV385_17735 PF04563 RNA polymerase beta subunit NV385_17740 PF00542 Ribosomal protein L7/L12 C-terminal domain NV385_17740 PF16320 Ribosomal protein L7/L12 dimerisation domain NV385_17745 PF00466 Ribosomal protein L10 NV385_17750 PF00687 Ribosomal protein L1p/L10e family NV385_17755 PF00298 Ribosomal protein L11, RNA binding domain NV385_17755 PF03946 Ribosomal protein L11, N-terminal domain NV385_17760 PF02357 Transcription termination factor nusG NV385_17760 PF00467 KOW motif NV385_17765 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NV385_17775 PF03143 Elongation factor Tu C-terminal domain NV385_17775 PF03144 Elongation factor Tu domain 2 NV385_17775 PF00009 Elongation factor Tu GTP binding domain NV385_17800 PF00425 chorismate binding enzyme NV385_17800 PF04715 Anthranilate synthase component I, N terminal region NV385_17805 PF13419 Haloacid dehalogenase-like hydrolase NV385_17810 PF12401 Protein of unknown function (DUF2662) NV385_17810 PF00498 FHA domain NV385_17815 PF00263 Bacterial type II and III secretion system protein NV385_17815 PF03958 Bacterial type II/III secretion system short domain NV385_17830 PF00816 H-NS histone family NV385_17855 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NV385_17855 PF03900 Porphobilinogen deaminase, C-terminal domain NV385_17860 PF04397 LytTr DNA-binding domain NV385_17860 PF00072 Response regulator receiver domain NV385_17865 PF06580 Histidine kinase NV385_17865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_17865 PF07694 5TMR of 5TMR-LYT NV385_17870 PF14698 Argininosuccinate lyase C-terminal NV385_17870 PF00206 Lyase NV385_17875 PF04362 Bacterial Fe(2+) trafficking NV385_17880 PF01895 PhoU domain NV385_17885 PF02321 Outer membrane efflux protein NV385_17890 PF00892 EamA-like transporter family NV385_17905 PF13667 ThiC-associated domain NV385_17905 PF01964 Radical SAM ThiC family NV385_17910 PF00293 NUDIX domain NV385_17915 PF00149 Calcineurin-like phosphoesterase NV385_17920 PF01258 Prokaryotic dksA/traR C4-type zinc finger NV385_17925 PF00749 tRNA synthetases class I (E and Q), catalytic domain NV385_17930 PF01098 Cell cycle protein NV385_17935 PF08245 Mur ligase middle domain NV385_17935 PF02875 Mur ligase family, glutamate ligase domain NV385_17945 PF07664 Ferrous iron transport protein B C terminus NV385_17945 PF02421 Ferrous iron transport protein B NV385_17945 PF07670 Nucleoside recognition NV385_17955 PF02899 Phage integrase, N-terminal SAM-like domain NV385_17955 PF00589 Phage integrase family NV385_17960 PF10411 Disulfide bond isomerase protein N-terminus NV385_17960 PF13098 Thioredoxin-like domain NV385_17965 PF00742 Homoserine dehydrogenase NV385_17965 PF01842 ACT domain NV385_17965 PF03447 Homoserine dehydrogenase, NAD binding domain NV385_17970 PF00291 Pyridoxal-phosphate dependent enzyme NV385_17975 PF00768 D-alanyl-D-alanine carboxypeptidase NV385_17980 PF00196 Bacterial regulatory proteins, luxR family NV385_17980 PF00072 Response regulator receiver domain NV385_17985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NV385_17985 PF00512 His Kinase A (phospho-acceptor) domain NV385_17990 PF02954 Bacterial regulatory protein, Fis family NV385_17990 PF00158 Sigma-54 interaction domain NV385_17990 PF00072 Response regulator receiver domain NV385_17995 PF00595 PDZ domain NV385_17995 PF03572 Peptidase family S41 NV385_18000 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NV385_18000 PF01676 Metalloenzyme superfamily NV385_18005 PF03739 Lipopolysaccharide export system permease LptF/LptG NV385_18015 PF00883 Cytosol aminopeptidase family, catalytic domain NV385_18015 PF02789 Cytosol aminopeptidase family, N-terminal domain NV385_18035 PF00677 Lumazine binding domain NV385_18045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NV385_18045 PF01872 RibD C-terminal domain NV385_18050 PF03477 ATP cone domain NV385_18055 PF00909 Ammonium Transporter Family NV385_18060 PF00543 Nitrogen regulatory protein P-II NV385_18080 PF01636 Phosphotransferase enzyme family NV385_18085 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase NV385_18105 PF02909 Tetracyclin repressor-like, C-terminal domain NV385_18105 PF00440 Bacterial regulatory proteins, tetR family NV385_18110 PF07690 Major Facilitator Superfamily NV385_18120 PF01740 STAS domain NV385_18120 PF00916 Sulfate permease family NV385_18125 PF00582 Universal stress protein family NV385_18145 PF00665 Integrase core domain NV385_18160 PF00155 Aminotransferase class I and II NV385_18160 PF00392 Bacterial regulatory proteins, gntR family NV385_18170 PF00701 Dihydrodipicolinate synthetase family NV385_18185 PF03573 outer membrane porin, OprD family NV385_18190 PF00719 Inorganic pyrophosphatase NV385_18205 PF00501 AMP-binding enzyme NV385_18205 PF13193 AMP-binding enzyme C-terminal domain NV385_18210 PF00521 DNA gyrase/topoisomerase IV, subunit A NV385_18210 PF03989 DNA gyrase C-terminal domain, beta-propeller NV385_18215 PF07690 Major Facilitator Superfamily NV385_18220 PF03458 UPF0126 domain NV385_18225 PF02810 SEC-C motif NV385_18230 PF03471 Transporter associated domain NV385_18230 PF03741 Integral membrane protein TerC family NV385_18235 PF03641 Possible lysine decarboxylase NV385_18240 PF07690 Major Facilitator Superfamily NV385_18250 PF11798 IMS family HHH motif NV385_18250 PF00817 impB/mucB/samB family NV385_18250 PF11799 impB/mucB/samB family C-terminal domain NV385_18270 PF11842 Domain of unknown function (DUF3362) NV385_18270 PF04055 Radical SAM superfamily NV385_18270 PF08497 Radical SAM N-terminal NV385_18290 PF03358 NADPH-dependent FMN reductase NV385_18300 PF00291 Pyridoxal-phosphate dependent enzyme NV385_18360 PF01327 Polypeptide deformylase NV385_18370 PF02481 DNA recombination-mediator protein A NV385_18370 PF17782 DprA winged helix domain NV385_18375 PF01300 Telomere recombination NV385_18380 PF00892 EamA-like transporter family NV385_18385 PF00440 Bacterial regulatory proteins, tetR family NV385_18390 PF07690 Major Facilitator Superfamily NV385_18400 PF00255 Glutathione peroxidase NV385_18410 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NV385_18415 PF02874 ATP synthase alpha/beta family, beta-barrel domain NV385_18415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NV385_18420 PF00231 ATP synthase NV385_18425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NV385_18425 PF00306 ATP synthase alpha/beta chain, C terminal domain NV385_18425 PF02874 ATP synthase alpha/beta family, beta-barrel domain NV385_18430 PF00213 ATP synthase delta (OSCP) subunit NV385_18435 PF00430 ATP synthase B/B' CF(0) NV385_18440 PF00137 ATP synthase subunit C NV385_18445 PF00119 ATP synthase A chain NV385_18465 PF00005 ABC transporter NV385_18470 PF00950 ABC 3 transport family NV385_18475 PF01810 LysE type translocator NV385_18480 PF04261 Dyp-type peroxidase family NV385_18490 PF00390 Malic enzyme, N-terminal domain NV385_18490 PF03949 Malic enzyme, NAD binding domain NV385_18495 PF05746 DALR anticodon binding domain NV385_18495 PF00750 tRNA synthetases class I (R) NV385_18495 PF03485 Arginyl tRNA synthetase N terminal domain NV385_18515 PF02678 Pirin NV385_18515 PF05726 Pirin C-terminal cupin domain NV385_18525 PF03551 Transcriptional regulator PadR-like family NV385_18530 PF13427 Domain of unknown function (DUF4111) NV385_18530 PF01909 Nucleotidyltransferase domain NV385_18535 PF00117 Glutamine amidotransferase class-I NV385_18535 PF00958 GMP synthase C terminal domain NV385_18535 PF02540 NAD synthase NV385_18540 PF04286 Protein of unknown function (DUF445) NV385_18545 PF07681 DoxX NV385_18550 PF09335 SNARE associated Golgi protein NV385_18565 PF13614 AAA domain NV385_18575 PF01722 BolA-like protein NV385_18590 PF01648 4'-phosphopantetheinyl transferase superfamily NV385_18595 PF12697 Alpha/beta hydrolase family NV385_18615 PF08242 Methyltransferase domain NV385_18615 PF00109 Beta-ketoacyl synthase, N-terminal domain NV385_18615 PF16197 Ketoacyl-synthetase C-terminal extension NV385_18615 PF00550 Phosphopantetheine attachment site NV385_18615 PF14765 Polyketide synthase dehydratase NV385_18615 PF00975 Thioesterase domain NV385_18615 PF02801 Beta-ketoacyl synthase, C-terminal domain NV385_18620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_18620 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_18620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_18625 PF00501 AMP-binding enzyme NV385_18630 PF03472 Autoinducer binding domain NV385_18630 PF00196 Bacterial regulatory proteins, luxR family NV385_18640 PF00765 Autoinducer synthase NV385_18645 PF07690 Major Facilitator Superfamily NV385_18645 PF00083 Sugar (and other) transporter NV385_18650 PF00378 Enoyl-CoA hydratase/isomerase NV385_18655 PF00378 Enoyl-CoA hydratase/isomerase NV385_18660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NV385_18660 PF02770 Acyl-CoA dehydrogenase, middle domain NV385_18660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NV385_18665 PF13193 AMP-binding enzyme C-terminal domain NV385_18665 PF00501 AMP-binding enzyme NV385_18670 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NV385_18670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NV385_18675 PF00171 Aldehyde dehydrogenase family NV385_18685 PF00324 Amino acid permease NV385_18690 PF00324 Amino acid permease NV385_18695 PF01042 Endoribonuclease L-PSP NV385_18700 PF01168 Alanine racemase, N-terminal domain NV385_18700 PF00842 Alanine racemase, C-terminal domain NV385_18705 PF01266 FAD dependent oxidoreductase NV385_18710 PF01037 Lrp/AsnC ligand binding domain NV385_18720 PF00593 TonB dependent receptor NV385_18720 PF07715 TonB-dependent Receptor Plug Domain NV385_18735 PF00849 RNA pseudouridylate synthase NV385_18750 PF00440 Bacterial regulatory proteins, tetR family NV385_18750 PF08361 MAATS-type transcriptional repressor, C-terminal region NV385_18760 PF00109 Beta-ketoacyl synthase, N-terminal domain NV385_18760 PF02801 Beta-ketoacyl synthase, C-terminal domain NV385_18795 PF00330 Aconitase family (aconitate hydratase) NV385_18795 PF00694 Aconitase C-terminal domain NV385_18800 PF00285 Citrate synthase, C-terminal domain NV385_18810 PF07729 FCD domain NV385_18810 PF00392 Bacterial regulatory proteins, gntR family NV385_18820 PF00155 Aminotransferase class I and II NV385_18825 PF01565 FAD binding domain NV385_18825 PF09330 D-lactate dehydrogenase, membrane binding NV385_18830 PF01070 FMN-dependent dehydrogenase NV385_18835 PF00392 Bacterial regulatory proteins, gntR family NV385_18835 PF07729 FCD domain NV385_18840 PF02652 L-lactate permease NV385_18845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NV385_18845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NV385_18845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NV385_18845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NV385_18850 PF16363 GDP-mannose 4,6 dehydratase NV385_18855 PF00342 Phosphoglucose isomerase NV385_18860 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NV385_18860 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NV385_18860 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NV385_18865 PF00483 Nucleotidyl transferase NV385_18870 PF02397 Bacterial sugar transferase NV385_18875 PF00535 Glycosyl transferase family 2 NV385_18905 PF08666 SAF domain NV385_18905 PF03102 NeuB family NV385_18920 PF02348 Cytidylyltransferase NV385_18925 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NV385_18930 PF02719 Polysaccharide biosynthesis protein NV385_18935 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NV385_18935 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NV385_18935 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NV385_18940 PF10531 SLBB domain NV385_18940 PF02563 Polysaccharide biosynthesis/export protein NV385_18940 PF18412 Outer-membrane lipoprotein Wza C-terminal domain NV385_18945 PF01451 Low molecular weight phosphotyrosine protein phosphatase NV385_18950 PF02706 Chain length determinant protein NV385_18950 PF13807 G-rich domain on putative tyrosine kinase NV385_18950 PF13614 AAA domain NV385_18955 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NV385_18955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NV385_18960 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NV385_18960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NV385_18965 PF03023 Lipid II flippase MurJ NV385_18970 PF01510 N-acetylmuramoyl-L-alanine amidase NV385_18975 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NV385_18975 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NV385_18995 PF01138 3' exoribonuclease family, domain 1 NV385_18995 PF03725 3' exoribonuclease family, domain 2 NV385_19000 PF00487 Fatty acid desaturase NV385_19005 PF00175 Oxidoreductase NAD-binding domain NV385_19010 PF00440 Bacterial regulatory proteins, tetR family NV385_19015 PF00440 Bacterial regulatory proteins, tetR family NV385_19015 PF08360 QacR-like protein, C-terminal region NV385_19020 PF01323 DSBA-like thioredoxin domain NV385_19030 PF13419 Haloacid dehalogenase-like hydrolase NV385_19035 PF00106 short chain dehydrogenase NV385_19050 PF00583 Acetyltransferase (GNAT) family NV385_19050 PF00696 Amino acid kinase family NV385_19055 PF09084 NMT1/THI5 like NV385_19060 PF09084 NMT1/THI5 like NV385_19065 PF00296 Luciferase-like monooxygenase NV385_19070 PF00528 Binding-protein-dependent transport system inner membrane component NV385_19075 PF00005 ABC transporter NV385_19080 PF08362 YcdC-like protein, C-terminal region NV385_19080 PF00440 Bacterial regulatory proteins, tetR family NV385_19085 PF01048 Phosphorylase superfamily NV385_19095 PF06574 FAD synthetase NV385_19095 PF01687 Riboflavin kinase NV385_19100 PF08264 Anticodon-binding domain of tRNA NV385_19100 PF00133 tRNA synthetases class I (I, L, M and V) NV385_19100 PF06827 Zinc finger found in FPG and IleRS NV385_19105 PF01252 Signal peptidase (SPase) II NV385_19110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NV385_19150 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NV385_19155 PF07859 alpha/beta hydrolase fold NV385_19175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NV385_19175 PF03466 LysR substrate binding domain NV385_19180 PF01025 GrpE NV385_19185 PF00012 Hsp70 protein NV385_19205 PF13406 Transglycosylase SLT domain NV385_19210 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NV385_19210 PF02222 ATP-grasp domain NV385_19215 PF00731 AIR carboxylase NV385_19225 PF08245 Mur ligase middle domain NV385_19225 PF02875 Mur ligase family, glutamate ligase domain NV385_19225 PF01225 Mur ligase family, catalytic domain NV385_19235 PF01569 PAP2 superfamily NV385_19240 PF03741 Integral membrane protein TerC family NV385_19250 PF03738 Glutathionylspermidine synthase preATP-grasp NV385_19255 PF00355 Rieske [2Fe-2S] domain NV385_19260 PF01979 Amidohydrolase family NV385_19265 PF00156 Phosphoribosyl transferase domain NV385_19275 PF10411 Disulfide bond isomerase protein N-terminus NV385_19275 PF13098 Thioredoxin-like domain NV385_19280 PF16916 Dimerisation domain of Zinc Transporter NV385_19280 PF01545 Cation efflux family NV385_19285 PF02583 Metal-sensitive transcriptional repressor NV385_19290 PF10396 GTP-binding protein TrmE N-terminus NV385_19290 PF12631 MnmE helical domain NV385_19290 PF01926 50S ribosome-binding GTPase NV385_19295 PF02096 60Kd inner membrane protein NV385_19295 PF14849 YidC periplasmic domain NV385_19300 PF01809 Putative membrane protein insertion efficiency factor NV385_19305 PF00825 Ribonuclease P NV385_19310 PF00468 Ribosomal protein L34 NV385_19320 PF01051 Initiator Replication protein NV385_19325 PF03389 MobA/MobL family NV385_19350 PF07715 TonB-dependent Receptor Plug Domain NV385_19350 PF00593 TonB dependent receptor NV385_19370 PF05973 Phage derived protein Gp49-like (DUF891) NV385_19385 PF03389 MobA/MobL family NV385_19390 PF01051 Initiator Replication protein NV385_19415 PF07715 TonB-dependent Receptor Plug Domain NV385_19415 PF00593 TonB dependent receptor NV385_19435 PF05973 Phage derived protein Gp49-like (DUF891)