locus-tag class description ABUW_0001 PF11638 DnaA N-terminal domain ABUW_0001 PF00308 Bacterial dnaA protein ABUW_0001 PF08299 Bacterial dnaA protein helix-turn-helix ABUW_0002 PF02767 DNA polymerase III beta subunit, central domain ABUW_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain ABUW_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain ABUW_0003 PF02463 RecF/RecN/SMC N terminal domain ABUW_0004 PF01751 Toprim domain ABUW_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0004 PF18053 DNA gyrase B subunit insert domain ABUW_0004 PF00986 DNA gyrase B subunit, carboxyl terminus ABUW_0004 PF00204 DNA gyrase B ABUW_0006 PF09335 SNARE associated Golgi protein ABUW_0007 PF12848 ABC transporter ABUW_0007 PF00005 ABC transporter ABUW_0011 PF01521 Iron-sulphur cluster biosynthesis ABUW_0012 PF00561 alpha/beta hydrolase fold ABUW_0013 PF03702 Anhydro-N-acetylmuramic acid kinase ABUW_0014 PF00579 tRNA synthetases class I (W and Y) ABUW_0022 PF00209 Sodium:neurotransmitter symporter family ABUW_0024 PF01029 NusB family ABUW_0024 PF01189 16S rRNA methyltransferase RsmB/F ABUW_0025 PF02911 Formyl transferase, C-terminal domain ABUW_0025 PF00551 Formyl transferase ABUW_0026 PF00920 Dehydratase family ABUW_0029 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_0029 PF03466 LysR substrate binding domain ABUW_0030 PF00860 Permease family ABUW_0031 PF00311 Phosphoenolpyruvate carboxylase ABUW_0033 PF00440 Bacterial regulatory proteins, tetR family ABUW_0033 PF08361 MAATS-type transcriptional repressor, C-terminal region ABUW_0034 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABUW_0035 PF00873 AcrB/AcrD/AcrF family ABUW_0037 PF00684 DnaJ central domain ABUW_0037 PF01556 DnaJ C terminal domain ABUW_0037 PF00226 DnaJ domain ABUW_0039 PF05173 Dihydrodipicolinate reductase, C-terminus ABUW_0039 PF01113 Dihydrodipicolinate reductase, N-terminus ABUW_0041 PF07690 Major Facilitator Superfamily ABUW_0042 PF00248 Aldo/keto reductase family ABUW_0043 PF03466 LysR substrate binding domain ABUW_0043 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_0045 PF00392 Bacterial regulatory proteins, gntR family ABUW_0045 PF00155 Aminotransferase class I and II ABUW_0046 PF08240 Alcohol dehydrogenase GroES-like domain ABUW_0046 PF00107 Zinc-binding dehydrogenase ABUW_0047 PF03352 Methyladenine glycosylase ABUW_0050 PF10576 Iron-sulfur binding domain of endonuclease III ABUW_0050 PF00633 Helix-hairpin-helix motif ABUW_0050 PF00730 HhH-GPD superfamily base excision DNA repair protein ABUW_0050 PF14815 NUDIX domain ABUW_0053 PF07043 Protein of unknown function (DUF1328) ABUW_0054 PF03692 Putative zinc- or iron-chelating domain ABUW_0055 PF07995 Glucose / Sorbosone dehydrogenase ABUW_0056 PF00004 ATPase family associated with various cellular activities (AAA) ABUW_0056 PF16193 AAA C-terminal domain ABUW_0056 PF12002 MgsA AAA+ ATPase C terminal ABUW_0057 PF01226 Formate/nitrite transporter ABUW_0059 PF01259 SAICAR synthetase ABUW_0061 PF00701 Dihydrodipicolinate synthetase family ABUW_0062 PF00857 Isochorismatase family ABUW_0063 PF01758 Sodium Bile acid symporter family ABUW_0064 PF01554 MatE ABUW_0065 PF04463 Protein of unknown function (DUF523) ABUW_0066 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABUW_0068 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABUW_0069 PF02798 Glutathione S-transferase, N-terminal domain ABUW_0069 PF14497 Glutathione S-transferase, C-terminal domain ABUW_0071 PF00324 Amino acid permease ABUW_0073 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABUW_0073 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABUW_0075 PF07702 UTRA domain ABUW_0075 PF00392 Bacterial regulatory proteins, gntR family ABUW_0076 PF05962 HutD ABUW_0077 PF17391 Urocanase N-terminal domain ABUW_0077 PF17392 Urocanase C-terminal domain ABUW_0077 PF01175 Urocanase Rossmann-like domain ABUW_0078 PF00221 Aromatic amino acid lyase ABUW_0079 PF00324 Amino acid permease ABUW_0080 PF01979 Amidohydrolase family ABUW_0081 PF00491 Arginase family ABUW_0084 PF01177 Asp/Glu/Hydantoin racemase ABUW_0086 PF00145 C-5 cytosine-specific DNA methylase ABUW_0087 PF08676 MutL C terminal dimerisation domain ABUW_0087 PF01119 DNA mismatch repair protein, C-terminal domain ABUW_0089 PF01380 SIS domain ABUW_0090 PF14602 Hexapeptide repeat of succinyl-transferase ABUW_0090 PF12804 MobA-like NTP transferase domain ABUW_0090 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_0091 PF04608 Phosphatidylglycerophosphatase A ABUW_0092 PF02769 AIR synthase related protein, C-terminal domain ABUW_0092 PF00586 AIR synthase related protein, N-terminal domain ABUW_0093 PF01029 NusB family ABUW_0094 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABUW_0095 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABUW_0095 PF00925 GTP cyclohydrolase II ABUW_0100 PF02580 D-Tyr-tRNA(Tyr) deacylase ABUW_0101 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ABUW_0101 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABUW_0102 PF00581 Rhodanese-like domain ABUW_0103 PF02666 Phosphatidylserine decarboxylase ABUW_0105 PF11808 Phosphate regulon sensor protein PhoR ABUW_0105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0105 PF00512 His Kinase A (phospho-acceptor) domain ABUW_0105 PF00989 PAS fold ABUW_0106 PF00072 Response regulator receiver domain ABUW_0106 PF00486 Transcriptional regulatory protein, C terminal ABUW_0108 PF00106 short chain dehydrogenase ABUW_0109 PF01554 MatE ABUW_0110 PF00155 Aminotransferase class I and II ABUW_0111 PF04286 Protein of unknown function (DUF445) ABUW_0114 PF04262 Glutamate-cysteine ligase ABUW_0115 PF02600 Disulfide bond formation protein DsbB ABUW_0116 PF04717 Type VI secretion system, phage-baseplate injector ABUW_0117 PF01510 N-acetylmuramoyl-L-alanine amidase ABUW_0117 PF01476 LysM domain ABUW_0117 PF01471 Putative peptidoglycan binding domain ABUW_0123 PF05728 Uncharacterised protein family (UPF0227) ABUW_0124 PF00204 DNA gyrase B ABUW_0124 PF00986 DNA gyrase B subunit, carboxyl terminus ABUW_0124 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0124 PF01751 Toprim domain ABUW_0125 PF04115 Ureidoglycolate lyase ABUW_0126 PF03561 Allantoicase repeat ABUW_0127 PF01494 FAD binding domain ABUW_0129 PF00860 Permease family ABUW_0130 PF00576 HIUase/Transthyretin family ABUW_0136 PF02683 Cytochrome C biogenesis protein transmembrane region ABUW_0136 PF11412 Disulphide bond corrector protein DsbC ABUW_0137 PF07694 5TMR of 5TMR-LYT ABUW_0137 PF00990 Diguanylate cyclase, GGDEF domain ABUW_0138 PF07859 alpha/beta hydrolase fold ABUW_0140 PF03960 ArsC family ABUW_0141 PF03372 Endonuclease/Exonuclease/phosphatase family ABUW_0142 PF00156 Phosphoribosyl transferase domain ABUW_0143 PF07715 TonB-dependent Receptor Plug Domain ABUW_0143 PF00593 TonB dependent receptor ABUW_0145 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ABUW_0145 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ABUW_0146 PF03033 Glycosyltransferase family 28 N-terminal domain ABUW_0146 PF04101 Glycosyltransferase family 28 C-terminal domain ABUW_0147 PF01225 Mur ligase family, catalytic domain ABUW_0147 PF02875 Mur ligase family, glutamate ligase domain ABUW_0147 PF08245 Mur ligase middle domain ABUW_0148 PF01820 D-ala D-ala ligase N-terminus ABUW_0148 PF07478 D-ala D-ala ligase C-terminus ABUW_0149 PF03799 Cell division protein FtsQ ABUW_0149 PF08478 POTRA domain, FtsQ-type ABUW_0150 PF02491 SHS2 domain inserted in FTSA ABUW_0151 PF00091 Tubulin/FtsZ family, GTPase domain ABUW_0151 PF12327 FtsZ family, C-terminal domain ABUW_0152 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ABUW_0154 PF01551 Peptidase family M23 ABUW_0155 PF00456 Transketolase, thiamine diphosphate binding domain ABUW_0155 PF17831 Pyruvate dehydrogenase E1 component middle domain ABUW_0156 PF00364 Biotin-requiring enzyme ABUW_0156 PF02817 e3 binding domain ABUW_0156 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABUW_0158 PF01169 Uncharacterized protein family UPF0016 ABUW_0159 PF00593 TonB dependent receptor ABUW_0159 PF07715 TonB-dependent Receptor Plug Domain ABUW_0160 PF01613 Flavin reductase like domain ABUW_0160 PF00258 Flavodoxin ABUW_0161 PF03692 Putative zinc- or iron-chelating domain ABUW_0162 PF00478 IMP dehydrogenase / GMP reductase domain ABUW_0162 PF00571 CBS domain ABUW_0163 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABUW_0163 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABUW_0163 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABUW_0163 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABUW_0164 PF01243 Pyridoxamine 5'-phosphate oxidase ABUW_0164 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ABUW_0165 PF17768 RecJ OB domain ABUW_0165 PF01368 DHH family ABUW_0165 PF02272 DHHA1 domain ABUW_0167 PF00472 RF-1 domain ABUW_0167 PF03462 PCRF domain ABUW_0170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABUW_0171 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ABUW_0172 PF04452 RNA methyltransferase ABUW_0173 PF00924 Mechanosensitive ion channel ABUW_0175 PF13193 AMP-binding enzyme C-terminal domain ABUW_0175 PF00501 AMP-binding enzyme ABUW_0175 PF16177 Acetyl-coenzyme A synthetase N-terminus ABUW_0176 PF00857 Isochorismatase family ABUW_0177 PF01037 Lrp/AsnC ligand binding domain ABUW_0178 PF00296 Luciferase-like monooxygenase ABUW_0179 PF03358 NADPH-dependent FMN reductase ABUW_0180 PF00072 Response regulator receiver domain ABUW_0180 PF00196 Bacterial regulatory proteins, luxR family ABUW_0182 PF01627 Hpt domain ABUW_0182 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0182 PF00672 HAMP domain ABUW_0182 PF00512 His Kinase A (phospho-acceptor) domain ABUW_0182 PF00072 Response regulator receiver domain ABUW_0183 PF04341 Protein of unknown function, DUF485 ABUW_0184 PF00474 Sodium:solute symporter family ABUW_0186 PF02028 BCCT, betaine/carnitine/choline family transporter ABUW_0188 PF17158 Membrane-associated sensor, integral membrane domain ABUW_0188 PF00990 Diguanylate cyclase, GGDEF domain ABUW_0189 PF00005 ABC transporter ABUW_0189 PF17755 UvrA DNA-binding domain ABUW_0189 PF17760 UvrA interaction domain ABUW_0190 PF16925 Tetracyclin repressor-like, C-terminal domain ABUW_0190 PF00440 Bacterial regulatory proteins, tetR family ABUW_0191 PF08240 Alcohol dehydrogenase GroES-like domain ABUW_0191 PF00107 Zinc-binding dehydrogenase ABUW_0193 PF06942 GlpM protein ABUW_0194 PF03070 TENA/THI-4/PQQC family ABUW_0194 PF08543 Phosphomethylpyrimidine kinase ABUW_0194 PF02581 Thiamine monophosphate synthase ABUW_0196 PF07690 Major Facilitator Superfamily ABUW_0197 PF00436 Single-strand binding protein family ABUW_0199 PF03591 AzlC protein ABUW_0201 PF00324 Amino acid permease ABUW_0202 PF00392 Bacterial regulatory proteins, gntR family ABUW_0202 PF00155 Aminotransferase class I and II ABUW_0203 PF00202 Aminotransferase class-III ABUW_0204 PF00171 Aldehyde dehydrogenase family ABUW_0205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_0206 PF00857 Isochorismatase family ABUW_0207 PF02678 Pirin ABUW_0207 PF05726 Pirin C-terminal cupin domain ABUW_0208 PF01593 Flavin containing amine oxidoreductase ABUW_0213 PF07690 Major Facilitator Superfamily ABUW_0214 PF03466 LysR substrate binding domain ABUW_0214 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_0218 PF00248 Aldo/keto reductase family ABUW_0219 PF12833 Helix-turn-helix domain ABUW_0219 PF02311 AraC-like ligand binding domain ABUW_0224 PF01638 HxlR-like helix-turn-helix ABUW_0227 PF01638 HxlR-like helix-turn-helix ABUW_0228 PF02525 Flavodoxin-like fold ABUW_0230 PF13302 Acetyltransferase (GNAT) domain ABUW_0232 PF02705 K+ potassium transporter ABUW_0237 PF00230 Major intrinsic protein ABUW_0240 PF00977 Histidine biosynthesis protein ABUW_0241 PF01636 Phosphotransferase enzyme family ABUW_0246 PF00977 Histidine biosynthesis protein ABUW_0249 PF00117 Glutamine amidotransferase class-I ABUW_0250 PF00475 Imidazoleglycerol-phosphate dehydratase ABUW_0254 PF00583 Acetyltransferase (GNAT) family ABUW_0255 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ABUW_0255 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ABUW_0256 PF00672 HAMP domain ABUW_0256 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0256 PF00512 His Kinase A (phospho-acceptor) domain ABUW_0257 PF00486 Transcriptional regulatory protein, C terminal ABUW_0257 PF00072 Response regulator receiver domain ABUW_0258 PF00575 S1 RNA binding domain ABUW_0258 PF09371 Tex-like protein N-terminal domain ABUW_0258 PF16921 Tex protein YqgF-like domain ABUW_0258 PF17674 HHH domain ABUW_0259 PF01740 STAS domain ABUW_0259 PF00916 Sulfate permease family ABUW_0260 PF00106 short chain dehydrogenase ABUW_0261 PF01053 Cys/Met metabolism PLP-dependent enzyme ABUW_0262 PF00005 ABC transporter ABUW_0262 PF12848 ABC transporter ABUW_0267 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABUW_0267 PF00529 HlyD membrane-fusion protein of T1SS ABUW_0268 PF00873 AcrB/AcrD/AcrF family ABUW_0269 PF01545 Cation efflux family ABUW_0275 PF00324 Amino acid permease ABUW_0278 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABUW_0281 PF01795 MraW methylase family ABUW_0283 PF03717 Penicillin-binding Protein dimerisation domain ABUW_0283 PF00905 Penicillin binding protein transpeptidase domain ABUW_0284 PF01225 Mur ligase family, catalytic domain ABUW_0284 PF08245 Mur ligase middle domain ABUW_0284 PF02875 Mur ligase family, glutamate ligase domain ABUW_0285 PF02875 Mur ligase family, glutamate ligase domain ABUW_0285 PF08245 Mur ligase middle domain ABUW_0285 PF01225 Mur ligase family, catalytic domain ABUW_0286 PF00953 Glycosyl transferase family 4 ABUW_0288 PF13847 Methyltransferase domain ABUW_0289 PF00912 Transglycosylase ABUW_0289 PF00905 Penicillin binding protein transpeptidase domain ABUW_0289 PF17092 Penicillin-binding protein OB-like domain ABUW_0294 PF11741 AMIN domain ABUW_0294 PF03958 Bacterial type II/III secretion system short domain ABUW_0294 PF00263 Bacterial type II and III secretion system protein ABUW_0294 PF07660 Secretin and TonB N terminus short domain ABUW_0295 PF01202 Shikimate kinase ABUW_0296 PF01761 3-dehydroquinate synthase ABUW_0298 PF01645 Conserved region in glutamate synthase ABUW_0298 PF01493 GXGXG motif ABUW_0298 PF00310 Glutamine amidotransferases class-II ABUW_0298 PF04898 Glutamate synthase central domain ABUW_0299 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABUW_0299 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_0301 PF04011 LemA family ABUW_0302 PF04536 TPM domain ABUW_0304 PF07963 Prokaryotic N-terminal methylation motif ABUW_0304 PF00114 Pilin (bacterial filament) ABUW_0305 PF11846 Virulence factor membrane-bound polymerase, C-terminal ABUW_0305 PF04932 O-Antigen ligase ABUW_0305 PF15864 Protein glycosylation ligase ABUW_0306 PF00210 Ferritin-like domain ABUW_0307 PF04324 BFD-like [2Fe-2S] binding domain ABUW_0308 PF01042 Endoribonuclease L-PSP ABUW_0309 PF02824 TGS domain ABUW_0309 PF04607 Region found in RelA / SpoT proteins ABUW_0309 PF13291 ACT domain ABUW_0310 PF01192 RNA polymerase Rpb6 ABUW_0311 PF00625 Guanylate kinase ABUW_0312 PF02401 LytB protein ABUW_0320 PF00886 Ribosomal protein S16 ABUW_0321 PF05239 PRC-barrel domain ABUW_0321 PF01782 RimM N-terminal domain ABUW_0322 PF01746 tRNA (Guanine-1)-methyltransferase ABUW_0323 PF01245 Ribosomal protein L19 ABUW_0324 PF00561 alpha/beta hydrolase fold ABUW_0325 PF03280 Proteobacterial lipase chaperone protein ABUW_0326 PF09157 Pseudouridine synthase II TruB, C-terminal ABUW_0326 PF16198 tRNA pseudouridylate synthase B C-terminal domain ABUW_0326 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABUW_0327 PF01925 Sulfite exporter TauE/SafE ABUW_0329 PF00892 EamA-like transporter family ABUW_0330 PF00892 EamA-like transporter family ABUW_0331 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABUW_0331 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABUW_0332 PF02913 FAD linked oxidases, C-terminal domain ABUW_0332 PF01565 FAD binding domain ABUW_0334 PF03992 Antibiotic biosynthesis monooxygenase ABUW_0335 PF02525 Flavodoxin-like fold ABUW_0337 PF07690 Major Facilitator Superfamily ABUW_0338 PF12805 FUSC-like inner membrane protein yccS ABUW_0339 PF00080 Copper/zinc superoxide dismutase (SODC) ABUW_0340 PF01594 AI-2E family transporter ABUW_0341 PF13614 AAA domain ABUW_0345 PF08241 Methyltransferase domain ABUW_0347 PF00324 Amino acid permease ABUW_0350 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABUW_0350 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABUW_0351 PF00202 Aminotransferase class-III ABUW_0352 PF04958 Arginine N-succinyltransferase beta subunit ABUW_0353 PF00171 Aldehyde dehydrogenase family ABUW_0354 PF04996 Succinylarginine dihydrolase ABUW_0355 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ABUW_0361 PF03466 LysR substrate binding domain ABUW_0361 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_0362 PF00892 EamA-like transporter family ABUW_0366 PF02092 Glycyl-tRNA synthetase beta subunit ABUW_0366 PF05746 DALR anticodon binding domain ABUW_0367 PF02091 Glycyl-tRNA synthetase alpha subunit ABUW_0368 PF07690 Major Facilitator Superfamily ABUW_0371 PF00571 CBS domain ABUW_0372 PF04024 PspC domain ABUW_0374 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABUW_0374 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_0374 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_0374 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_0376 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ABUW_0376 PF08501 Shikimate dehydrogenase substrate binding domain ABUW_0376 PF01488 Shikimate / quinate 5-dehydrogenase ABUW_0377 PF01218 Coproporphyrinogen III oxidase ABUW_0378 PF00925 GTP cyclohydrolase II ABUW_0379 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABUW_0379 PF02779 Transketolase, pyrimidine binding domain ABUW_0379 PF02780 Transketolase, C-terminal domain ABUW_0380 PF00459 Inositol monophosphatase family ABUW_0381 PF00271 Helicase conserved C-terminal domain ABUW_0381 PF12343 Cold shock protein DEAD box A ABUW_0381 PF03880 DbpA RNA binding domain ABUW_0381 PF00270 DEAD/DEAH box helicase ABUW_0383 PF00005 ABC transporter ABUW_0384 PF02405 Permease MlaE ABUW_0386 PF05494 MlaC protein ABUW_0388 PF01544 CorA-like Mg2+ transporter protein ABUW_0389 PF03641 Possible lysine decarboxylase ABUW_0390 PF00293 NUDIX domain ABUW_0391 PF00156 Phosphoribosyl transferase domain ABUW_0392 PF17191 RecG wedge domain ABUW_0392 PF00270 DEAD/DEAH box helicase ABUW_0392 PF00271 Helicase conserved C-terminal domain ABUW_0395 PF01553 Acyltransferase ABUW_0397 PF00375 Sodium:dicarboxylate symporter family ABUW_0399 PF01926 50S ribosome-binding GTPase ABUW_0400 PF02082 Transcriptional regulator ABUW_0401 PF00175 Oxidoreductase NAD-binding domain ABUW_0401 PF00042 Globin ABUW_0401 PF00970 Oxidoreductase FAD-binding domain ABUW_0402 PF05872 Bacterial protein of unknown function (DUF853) ABUW_0403 PF01053 Cys/Met metabolism PLP-dependent enzyme ABUW_0404 PF00117 Glutamine amidotransferase class-I ABUW_0405 PF00338 Ribosomal protein S10p/S20e ABUW_0406 PF00297 Ribosomal protein L3 ABUW_0407 PF00573 Ribosomal protein L4/L1 family ABUW_0408 PF00276 Ribosomal protein L23 ABUW_0409 PF03947 Ribosomal Proteins L2, C-terminal domain ABUW_0409 PF00181 Ribosomal Proteins L2, RNA binding domain ABUW_0410 PF00203 Ribosomal protein S19 ABUW_0411 PF00237 Ribosomal protein L22p/L17e ABUW_0412 PF07650 KH domain ABUW_0412 PF00189 Ribosomal protein S3, C-terminal domain ABUW_0413 PF00252 Ribosomal protein L16p/L10e ABUW_0414 PF00831 Ribosomal L29 protein ABUW_0415 PF00366 Ribosomal protein S17 ABUW_0416 PF00238 Ribosomal protein L14p/L23e ABUW_0417 PF00467 KOW motif ABUW_0417 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABUW_0418 PF00281 Ribosomal protein L5 ABUW_0418 PF00673 ribosomal L5P family C-terminus ABUW_0419 PF00253 Ribosomal protein S14p/S29e ABUW_0420 PF00410 Ribosomal protein S8 ABUW_0421 PF00347 Ribosomal protein L6 ABUW_0422 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABUW_0423 PF03719 Ribosomal protein S5, C-terminal domain ABUW_0423 PF00333 Ribosomal protein S5, N-terminal domain ABUW_0424 PF00327 Ribosomal protein L30p/L7e ABUW_0425 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABUW_0426 PF00344 SecY translocase ABUW_0427 PF00444 Ribosomal protein L36 ABUW_0428 PF00416 Ribosomal protein S13/S18 ABUW_0429 PF00411 Ribosomal protein S11 ABUW_0430 PF00163 Ribosomal protein S4/S9 N-terminal domain ABUW_0430 PF01479 S4 domain ABUW_0431 PF01000 RNA polymerase Rpb3/RpoA insert domain ABUW_0431 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABUW_0431 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABUW_0432 PF01196 Ribosomal protein L17 ABUW_0433 PF00743 Flavin-binding monooxygenase-like ABUW_0434 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_0434 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_0434 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_0435 PF03937 Flavinator of succinate dehydrogenase ABUW_0442 PF09526 Probable metal-binding protein (DUF2387) ABUW_0443 PF01432 Peptidase family M3 ABUW_0444 PF00575 S1 RNA binding domain ABUW_0444 PF08206 Ribonuclease B OB domain ABUW_0444 PF00773 RNB domain ABUW_0444 PF08461 Ribonuclease R winged-helix domain ABUW_0444 PF17876 Cold shock domain ABUW_0453 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABUW_0454 PF12833 Helix-turn-helix domain ABUW_0455 PF00892 EamA-like transporter family ABUW_0456 PF03631 Virulence factor BrkB ABUW_0457 PF03358 NADPH-dependent FMN reductase ABUW_0462 PF02130 Uncharacterized protein family UPF0054 ABUW_0463 PF02562 PhoH-like protein ABUW_0464 PF00919 Uncharacterized protein family UPF0004 ABUW_0464 PF01938 TRAM domain ABUW_0464 PF04055 Radical SAM superfamily ABUW_0465 PF01551 Peptidase family M23 ABUW_0465 PF10145 Phage-related minor tail protein ABUW_0465 PF01464 Transglycosylase SLT domain ABUW_0467 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABUW_0467 PF00056 lactate/malate dehydrogenase, NAD binding domain ABUW_0471 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ABUW_0472 PF01066 CDP-alcohol phosphatidyltransferase ABUW_0481 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_0481 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_0481 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_0482 PF17932 Tetracyclin repressor-like, C-terminal domain ABUW_0482 PF00440 Bacterial regulatory proteins, tetR family ABUW_0486 PF01039 Carboxyl transferase domain ABUW_0487 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_0487 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_0487 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_0489 PF00364 Biotin-requiring enzyme ABUW_0489 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABUW_0489 PF02785 Biotin carboxylase C-terminal domain ABUW_0489 PF00289 Biotin carboxylase, N-terminal domain ABUW_0491 PF04386 Stringent starvation protein B ABUW_0492 PF00043 Glutathione S-transferase, C-terminal domain ABUW_0492 PF13417 Glutathione S-transferase, N-terminal domain ABUW_0493 PF00380 Ribosomal protein S9/S16 ABUW_0494 PF00572 Ribosomal protein L13 ABUW_0495 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABUW_0496 PF00398 Ribosomal RNA adenine dimethylase ABUW_0497 PF00149 Calcineurin-like phosphoesterase ABUW_0501 PF01926 50S ribosome-binding GTPase ABUW_0501 PF16360 GTP-binding GTPase Middle Region ABUW_0501 PF13167 GTP-binding GTPase N-terminal ABUW_0503 PF13091 PLD-like domain ABUW_0504 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABUW_0504 PF00149 Calcineurin-like phosphoesterase ABUW_0505 PF01389 OmpA-like transmembrane domain ABUW_0505 PF00691 OmpA family ABUW_0506 PF00990 Diguanylate cyclase, GGDEF domain ABUW_0506 PF17152 Periplasmic sensor domain ABUW_0513 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_0513 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABUW_0515 PF00753 Metallo-beta-lactamase superfamily ABUW_0515 PF04273 Putative phosphatase (DUF442) ABUW_0516 PF00561 alpha/beta hydrolase fold ABUW_0517 PF00085 Thioredoxin ABUW_0518 PF03061 Thioesterase superfamily ABUW_0520 PF04461 Protein of unknown function (DUF520) ABUW_0522 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABUW_0522 PF01266 FAD dependent oxidoreductase ABUW_0524 PF03795 YCII-related domain ABUW_0525 PF04279 Intracellular septation protein A ABUW_0526 PF02811 PHP domain ABUW_0527 PF01062 Bestrophin, RFP-TM, chloride channel ABUW_0528 PF04002 RadC-like JAB domain ABUW_0529 PF04127 DNA / pantothenate metabolism flavoprotein ABUW_0529 PF02441 Flavoprotein ABUW_0530 PF07549 SecD/SecF GG Motif ABUW_0530 PF02355 Protein export membrane protein ABUW_0531 PF13721 SecD export protein N-terminal TM region ABUW_0531 PF07549 SecD/SecF GG Motif ABUW_0531 PF02355 Protein export membrane protein ABUW_0532 PF02699 Preprotein translocase subunit ABUW_0533 PF01702 Queuine tRNA-ribosyltransferase ABUW_0536 PF02547 Queuosine biosynthesis protein ABUW_0541 PF00929 Exonuclease ABUW_0542 PF00436 Single-strand binding protein family ABUW_0551 PF09669 Phage regulatory protein Rha (Phage_pRha) ABUW_0551 PF10549 ORF11CD3 domain ABUW_0553 PF01653 NAD-dependent DNA ligase adenylation domain ABUW_0553 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ABUW_0553 PF03120 NAD-dependent DNA ligase OB-fold domain ABUW_0553 PF00533 BRCA1 C Terminus (BRCT) domain ABUW_0553 PF12826 Helix-hairpin-helix motif ABUW_0563 PF00905 Penicillin binding protein transpeptidase domain ABUW_0575 PF01510 N-acetylmuramoyl-L-alanine amidase ABUW_0575 PF01471 Putative peptidoglycan binding domain ABUW_0585 PF00512 His Kinase A (phospho-acceptor) domain ABUW_0585 PF07689 KaiB domain ABUW_0585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0586 PF08335 GlnD PII-uridylyltransferase ABUW_0586 PF03710 Glutamate-ammonia ligase adenylyltransferase ABUW_0587 PF01063 Amino-transferase class IV ABUW_0590 PF01522 Polysaccharide deacetylase ABUW_0591 PF00535 Glycosyl transferase family 2 ABUW_0592 PF00534 Glycosyl transferases group 1 ABUW_0592 PF13439 Glycosyltransferase Family 4 ABUW_0595 PF02350 UDP-N-acetylglucosamine 2-epimerase ABUW_0598 PF01336 OB-fold nucleic acid binding domain ABUW_0598 PF00152 tRNA synthetases class II (D, K and N) ABUW_0598 PF02938 GAD domain ABUW_0600 PF07715 TonB-dependent Receptor Plug Domain ABUW_0600 PF00593 TonB dependent receptor ABUW_0604 PF06146 Phosphate-starvation-inducible E ABUW_0605 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_0605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_0605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_0605 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABUW_0606 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_0606 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_0606 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABUW_0606 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_0608 PF00672 HAMP domain ABUW_0608 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0608 PF00512 His Kinase A (phospho-acceptor) domain ABUW_0609 PF00486 Transcriptional regulatory protein, C terminal ABUW_0609 PF00072 Response regulator receiver domain ABUW_0610 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABUW_0614 PF01923 Cobalamin adenosyltransferase ABUW_0615 PF00593 TonB dependent receptor ABUW_0615 PF07715 TonB-dependent Receptor Plug Domain ABUW_0616 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ABUW_0617 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_0622 PF00290 Tryptophan synthase alpha chain ABUW_0623 PF01039 Carboxyl transferase domain ABUW_0624 PF02875 Mur ligase family, glutamate ligase domain ABUW_0624 PF08245 Mur ligase middle domain ABUW_0627 PF00753 Metallo-beta-lactamase superfamily ABUW_0628 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABUW_0628 PF00578 AhpC/TSA family ABUW_0629 PF02810 SEC-C motif ABUW_0629 PF01043 SecA preprotein cross-linking domain ABUW_0629 PF07516 SecA Wing and Scaffold domain ABUW_0629 PF07517 SecA DEAD-like domain ABUW_0631 PF00083 Sugar (and other) transporter ABUW_0631 PF07690 Major Facilitator Superfamily ABUW_0632 PF03006 Haemolysin-III related ABUW_0634 PF13673 Acetyltransferase (GNAT) domain ABUW_0637 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABUW_0637 PF00378 Enoyl-CoA hydratase/isomerase ABUW_0637 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABUW_0638 PF02803 Thiolase, C-terminal domain ABUW_0638 PF00108 Thiolase, N-terminal domain ABUW_0639 PF12833 Helix-turn-helix domain ABUW_0639 PF02311 AraC-like ligand binding domain ABUW_0640 PF02515 CoA-transferase family III ABUW_0641 PF04966 Carbohydrate-selective porin, OprB family ABUW_0642 PF01011 PQQ enzyme repeat ABUW_0643 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABUW_0643 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABUW_0645 PF00893 Small Multidrug Resistance protein ABUW_0647 PF02803 Thiolase, C-terminal domain ABUW_0647 PF00108 Thiolase, N-terminal domain ABUW_0649 PF13505 Outer membrane protein beta-barrel domain ABUW_0649 PF00691 OmpA family ABUW_0651 PF01139 tRNA-splicing ligase RtcB ABUW_0652 PF00324 Amino acid permease ABUW_0653 PF08468 Methyltransferase small domain N-terminal ABUW_0653 PF05175 Methyltransferase small domain ABUW_0654 PF00860 Permease family ABUW_0656 PF01741 Large-conductance mechanosensitive channel, MscL ABUW_0659 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ABUW_0659 PF06827 Zinc finger found in FPG and IleRS ABUW_0659 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ABUW_0660 PF02245 Methylpurine-DNA glycosylase (MPG) ABUW_0661 PF07715 TonB-dependent Receptor Plug Domain ABUW_0661 PF00593 TonB dependent receptor ABUW_0662 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABUW_0663 PF03547 Membrane transport protein ABUW_0665 PF10411 Disulfide bond isomerase protein N-terminus ABUW_0665 PF13098 Thioredoxin-like domain ABUW_0666 PF01571 Aminomethyltransferase folate-binding domain ABUW_0668 PF04343 Protein of unknown function, DUF488 ABUW_0669 PF08274 PhnA Zinc-Ribbon ABUW_0669 PF03831 PhnA domain ABUW_0673 PF07411 Domain of unknown function (DUF1508) ABUW_0674 PF04073 Aminoacyl-tRNA editing domain ABUW_0674 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABUW_0674 PF03129 Anticodon binding domain ABUW_0675 PF00873 AcrB/AcrD/AcrF family ABUW_0678 PF00072 Response regulator receiver domain ABUW_0679 PF00072 Response regulator receiver domain ABUW_0680 PF01584 CheW-like domain ABUW_0681 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ABUW_0681 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABUW_0682 PF01584 CheW-like domain ABUW_0682 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0682 PF01627 Hpt domain ABUW_0682 PF00072 Response regulator receiver domain ABUW_0684 PF06969 HemN C-terminal domain ABUW_0684 PF04055 Radical SAM superfamily ABUW_0686 PF01546 Peptidase family M20/M25/M40 ABUW_0686 PF07687 Peptidase dimerisation domain ABUW_0687 PF08085 Entericidin EcnA/B family ABUW_0689 PF04304 Protein of unknown function (DUF454) ABUW_0690 PF03734 L,D-transpeptidase catalytic domain ABUW_0690 PF17969 L,D-transpeptidase C-terminal domain ABUW_0698 PF00175 Oxidoreductase NAD-binding domain ABUW_0698 PF00667 FAD binding domain ABUW_0698 PF00258 Flavodoxin ABUW_0700 PF12805 FUSC-like inner membrane protein yccS ABUW_0701 PF07690 Major Facilitator Superfamily ABUW_0702 PF00881 Nitroreductase family ABUW_0704 PF01235 Sodium:alanine symporter family ABUW_0705 PF01734 Patatin-like phospholipase ABUW_0706 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_0706 PF13291 ACT domain ABUW_0707 PF05992 SbmA/BacA-like family ABUW_0712 PF02934 GatB/GatE catalytic domain ABUW_0712 PF02637 GatB domain ABUW_0713 PF01425 Amidase ABUW_0714 PF02686 Glu-tRNAGln amidotransferase C subunit ABUW_0716 PF04085 rod shape-determining protein MreC ABUW_0717 PF04093 rod shape-determining protein MreD ABUW_0718 PF02545 Maf-like protein ABUW_0719 PF00575 S1 RNA binding domain ABUW_0719 PF10150 Ribonuclease E/G family ABUW_0721 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ABUW_0721 PF06974 Protein of unknown function (DUF1298) ABUW_0722 PF01507 Phosphoadenosine phosphosulfate reductase family ABUW_0725 PF02525 Flavodoxin-like fold ABUW_0729 PF02673 Bacitracin resistance protein BacA ABUW_0730 PF12833 Helix-turn-helix domain ABUW_0730 PF06719 AraC-type transcriptional regulator N-terminus ABUW_0731 PF00109 Beta-ketoacyl synthase, N-terminal domain ABUW_0731 PF02801 Beta-ketoacyl synthase, C-terminal domain ABUW_0731 PF08990 Erythronolide synthase docking ABUW_0731 PF08659 KR domain ABUW_0731 PF14765 Polyketide synthase dehydratase ABUW_0731 PF08240 Alcohol dehydrogenase GroES-like domain ABUW_0731 PF00550 Phosphopantetheine attachment site ABUW_0731 PF00698 Acyl transferase domain ABUW_0731 PF09277 Erythronolide synthase, docking ABUW_0731 PF16197 Ketoacyl-synthetase C-terminal extension ABUW_0732 PF01965 DJ-1/PfpI family ABUW_0745 PF12161 HsdM N-terminal domain ABUW_0745 PF02384 N-6 DNA Methylase ABUW_0752 PF00772 DnaB-like helicase N terminal domain ABUW_0752 PF03796 DnaB-like helicase C terminal domain ABUW_0752 PF14528 LAGLIDADG-like domain ABUW_0762 PF00149 Calcineurin-like phosphoesterase ABUW_0815 PF13356 Arm DNA-binding domain ABUW_0815 PF00589 Phage integrase family ABUW_0817 PF00324 Amino acid permease ABUW_0818 PF04303 PrpF protein ABUW_0819 PF00348 Polyprenyl synthetase ABUW_0820 PF04237 YjbR ABUW_0821 PF01145 SPFH domain / Band 7 family ABUW_0823 PF01734 Patatin-like phospholipase ABUW_0827 PF00884 Sulfatase ABUW_0827 PF08019 Phosphoethanolamine transferase EptA/EptB ABUW_0828 PF00072 Response regulator receiver domain ABUW_0828 PF00486 Transcriptional regulatory protein, C terminal ABUW_0829 PF08521 Two-component sensor kinase N-terminal ABUW_0829 PF00512 His Kinase A (phospho-acceptor) domain ABUW_0829 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0831 PF00909 Ammonium Transporter Family ABUW_0832 PF03466 LysR substrate binding domain ABUW_0832 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_0836 PF10458 Valyl tRNA synthetase tRNA binding arm ABUW_0836 PF00133 tRNA synthetases class I (I, L, M and V) ABUW_0836 PF08264 Anticodon-binding domain of tRNA ABUW_0840 PF01906 Putative heavy-metal-binding ABUW_0841 PF01906 Putative heavy-metal-binding ABUW_0842 PF02321 Outer membrane efflux protein ABUW_0843 PF00873 AcrB/AcrD/AcrF family ABUW_0844 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABUW_0844 PF00529 HlyD membrane-fusion protein of T1SS ABUW_0845 PF01569 PAP2 superfamily ABUW_0847 PF00348 Polyprenyl synthetase ABUW_0848 PF00829 Ribosomal prokaryotic L21 protein ABUW_0849 PF01016 Ribosomal L27 protein ABUW_0850 PF03548 Outer membrane lipoprotein carrier protein LolA ABUW_0852 PF02403 Seryl-tRNA synthetase N-terminal domain ABUW_0852 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABUW_0853 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABUW_0853 PF10414 Sirohaem synthase dimerisation region ABUW_0853 PF14824 Sirohaem biosynthesis protein central ABUW_0854 PF00588 SpoU rRNA Methylase family ABUW_0855 PF01638 HxlR-like helix-turn-helix ABUW_0856 PF03358 NADPH-dependent FMN reductase ABUW_0857 PF13520 Amino acid permease ABUW_0858 PF00465 Iron-containing alcohol dehydrogenase ABUW_0860 PF03099 Biotin/lipoate A/B protein ligase family ABUW_0861 PF04359 Protein of unknown function (DUF493) ABUW_0862 PF04539 Sigma-70 region 3 ABUW_0862 PF04546 Sigma-70, non-essential region ABUW_0862 PF03979 Sigma-70 factor, region 1.1 ABUW_0862 PF00140 Sigma-70 factor, region 1.2 ABUW_0862 PF04542 Sigma-70 region 2 ABUW_0862 PF04545 Sigma-70, region 4 ABUW_0867 PF00285 Citrate synthase, C-terminal domain ABUW_0868 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABUW_0869 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABUW_0870 PF02910 Fumarate reductase flavoprotein C-term ABUW_0870 PF00890 FAD binding domain ABUW_0871 PF13085 2Fe-2S iron-sulfur cluster binding domain ABUW_0872 PF16870 2-oxoglutarate dehydrogenase C-terminal ABUW_0872 PF02779 Transketolase, pyrimidine binding domain ABUW_0872 PF00676 Dehydrogenase E1 component ABUW_0872 PF16078 2-oxoglutarate dehydrogenase N-terminus ABUW_0873 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABUW_0873 PF00364 Biotin-requiring enzyme ABUW_0873 PF02817 e3 binding domain ABUW_0874 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_0874 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABUW_0875 PF00549 CoA-ligase ABUW_0875 PF08442 ATP-grasp domain ABUW_0876 PF00549 CoA-ligase ABUW_0876 PF02629 CoA binding domain ABUW_0881 PF00579 tRNA synthetases class I (W and Y) ABUW_0882 PF05661 Protein of unknown function (DUF808) ABUW_0883 PF04228 Putative neutral zinc metallopeptidase ABUW_0884 PF00999 Sodium/hydrogen exchanger family ABUW_0887 PF09587 Bacterial capsule synthesis protein PGA_cap ABUW_0889 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABUW_0890 PF00582 Universal stress protein family ABUW_0891 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_0892 PF01272 Transcription elongation factor, GreA/GreB, C-term ABUW_0892 PF03449 Transcription elongation factor, N-terminal ABUW_0893 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABUW_0893 PF02142 MGS-like domain ABUW_0893 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABUW_0894 PF00117 Glutamine amidotransferase class-I ABUW_0894 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABUW_0897 PF01985 CRS1 / YhbY (CRM) domain ABUW_0898 PF01728 FtsJ-like methyltransferase ABUW_0899 PF17862 AAA+ lid domain ABUW_0899 PF01434 Peptidase family M41 ABUW_0899 PF06480 FtsH Extracellular ABUW_0899 PF00004 ATPase family associated with various cellular activities (AAA) ABUW_0900 PF00809 Pterin binding enzyme ABUW_0904 PF09423 PhoD-like phosphatase ABUW_0904 PF16655 PhoD-like phosphatase, N-terminal domain ABUW_0907 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABUW_0907 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABUW_0910 PF00083 Sugar (and other) transporter ABUW_0911 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABUW_0911 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABUW_0912 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ABUW_0912 PF01266 FAD dependent oxidoreductase ABUW_0913 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ABUW_0913 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ABUW_0914 PF00781 Diacylglycerol kinase catalytic domain ABUW_0915 PF00149 Calcineurin-like phosphoesterase ABUW_0917 PF00166 Chaperonin 10 Kd subunit ABUW_0918 PF00118 TCP-1/cpn60 chaperonin family ABUW_0919 PF01219 Prokaryotic diacylglycerol kinase ABUW_0920 PF00753 Metallo-beta-lactamase superfamily ABUW_0921 PF03009 Glycerophosphoryl diester phosphodiesterase family ABUW_0922 PF00873 AcrB/AcrD/AcrF family ABUW_0924 PF01435 Peptidase family M48 ABUW_0925 PF01464 Transglycosylase SLT domain ABUW_0926 PF01171 PP-loop family ABUW_0928 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABUW_0928 PF01464 Transglycosylase SLT domain ABUW_0929 PF03449 Transcription elongation factor, N-terminal ABUW_0929 PF01272 Transcription elongation factor, GreA/GreB, C-term ABUW_0932 PF00668 Condensation domain ABUW_0932 PF00550 Phosphopantetheine attachment site ABUW_0932 PF13193 AMP-binding enzyme C-terminal domain ABUW_0932 PF00975 Thioesterase domain ABUW_0932 PF00501 AMP-binding enzyme ABUW_0940 PF00881 Nitroreductase family ABUW_0943 PF02595 Glycerate kinase family ABUW_0944 PF00384 Molybdopterin oxidoreductase ABUW_0945 PF02634 FdhD/NarQ family ABUW_0946 PF06803 Protein of unknown function (DUF1232) ABUW_0947 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABUW_0947 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABUW_0947 PF11890 Domain of unknown function (DUF3410) ABUW_0948 PF00152 tRNA synthetases class II (D, K and N) ABUW_0950 PF18073 Rubredoxin metal binding domain ABUW_0951 PF00324 Amino acid permease ABUW_0953 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABUW_0953 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABUW_0954 PF01678 Diaminopimelate epimerase ABUW_0955 PF00561 alpha/beta hydrolase fold ABUW_0956 PF01810 LysE type translocator ABUW_0957 PF00589 Phage integrase family ABUW_0957 PF02899 Phage integrase, N-terminal SAM-like domain ABUW_0958 PF01012 Electron transfer flavoprotein domain ABUW_0959 PF01012 Electron transfer flavoprotein domain ABUW_0959 PF00766 Electron transfer flavoprotein FAD-binding domain ABUW_0960 PF00521 DNA gyrase/topoisomerase IV, subunit A ABUW_0960 PF03989 DNA gyrase C-terminal domain, beta-propeller ABUW_0963 PF00535 Glycosyl transferase family 2 ABUW_0967 PF13533 Biotin-lipoyl like ABUW_0969 PF00266 Aminotransferase class-V ABUW_0972 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ABUW_0974 PF02687 FtsX-like permease family ABUW_0974 PF12704 MacB-like periplasmic core domain ABUW_0975 PF00005 ABC transporter ABUW_0976 PF00753 Metallo-beta-lactamase superfamily ABUW_0976 PF13567 Domain of unknown function (DUF4131) ABUW_0976 PF03772 Competence protein ABUW_0978 PF01343 Peptidase family S49 ABUW_0978 PF06965 Na+/H+ antiporter 1 ABUW_0979 PF12697 Alpha/beta hydrolase family ABUW_0980 PF00551 Formyl transferase ABUW_0981 PF02769 AIR synthase related protein, C-terminal domain ABUW_0981 PF00586 AIR synthase related protein, N-terminal domain ABUW_0982 PF01594 AI-2E family transporter ABUW_0983 PF11638 DnaA N-terminal domain ABUW_0983 PF08299 Bacterial dnaA protein helix-turn-helix ABUW_0983 PF00308 Bacterial dnaA protein ABUW_0989 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABUW_0989 PF00588 SpoU rRNA Methylase family ABUW_0990 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ABUW_0992 PF00691 OmpA family ABUW_0993 PF07676 WD40-like Beta Propeller Repeat ABUW_0993 PF04052 TolB amino-terminal domain ABUW_0995 PF02472 Biopolymer transport protein ExbD/TolR ABUW_0996 PF01618 MotA/TolQ/ExbB proton channel family ABUW_0997 PF03061 Thioesterase superfamily ABUW_0998 PF01546 Peptidase family M20/M25/M40 ABUW_0998 PF07687 Peptidase dimerisation domain ABUW_0999 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABUW_0999 PF05491 RuvB C-terminal winged helix domain ABUW_0999 PF17864 RuvB AAA lid domain ABUW_1000 PF01330 RuvA N terminal domain ABUW_1000 PF07499 RuvA, C-terminal domain ABUW_1001 PF01966 HD domain ABUW_1002 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ABUW_1002 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ABUW_1002 PF02769 AIR synthase related protein, C-terminal domain ABUW_1003 PF07690 Major Facilitator Superfamily ABUW_1005 PF01784 NIF3 (NGG1p interacting factor 3) ABUW_1006 PF00378 Enoyl-CoA hydratase/isomerase ABUW_1007 PF00293 NUDIX domain ABUW_1007 PF01467 Cytidylyltransferase-like ABUW_1009 PF00578 AhpC/TSA family ABUW_1012 PF06508 Queuosine biosynthesis protein QueC ABUW_1014 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_1014 PF14602 Hexapeptide repeat of succinyl-transferase ABUW_1014 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ABUW_1016 PF03466 LysR substrate binding domain ABUW_1016 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1017 PF12857 TOBE-like domain ABUW_1017 PF00005 ABC transporter ABUW_1018 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_1019 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_1022 PF01063 Amino-transferase class IV ABUW_1023 PF02618 YceG-like family ABUW_1024 PF02223 Thymidylate kinase ABUW_1026 PF00890 FAD binding domain ABUW_1026 PF02910 Fumarate reductase flavoprotein C-term ABUW_1027 PF13180 PDZ domain ABUW_1029 PF00679 Elongation factor G C-terminus ABUW_1029 PF00009 Elongation factor Tu GTP binding domain ABUW_1029 PF03144 Elongation factor Tu domain 2 ABUW_1029 PF06421 GTP-binding protein LepA C-terminus ABUW_1030 PF10502 Signal peptidase, peptidase S26 ABUW_1032 PF14622 Ribonuclease-III-like ABUW_1032 PF00035 Double-stranded RNA binding motif ABUW_1033 PF07650 KH domain ABUW_1033 PF01926 50S ribosome-binding GTPase ABUW_1035 PF02565 Recombination protein O C terminal ABUW_1035 PF11967 Recombination protein O N terminal ABUW_1036 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ABUW_1037 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ABUW_1038 PF00106 short chain dehydrogenase ABUW_1045 PF00990 Diguanylate cyclase, GGDEF domain ABUW_1045 PF17151 Periplasmic sensor domain ABUW_1047 PF12344 Ultra-violet resistance protein B ABUW_1047 PF04851 Type III restriction enzyme, res subunit ABUW_1047 PF02151 UvrB/uvrC motif ABUW_1047 PF00271 Helicase conserved C-terminal domain ABUW_1047 PF17757 UvrB interaction domain ABUW_1049 PF00892 EamA-like transporter family ABUW_1050 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABUW_1050 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABUW_1053 PF01926 50S ribosome-binding GTPase ABUW_1053 PF01018 GTP1/OBG ABUW_1054 PF00696 Amino acid kinase family ABUW_1054 PF01472 PUA domain ABUW_1056 PF07759 Protein of unknown function (DUF1615) ABUW_1057 PF01207 Dihydrouridine synthase (Dus) ABUW_1058 PF03060 Nitronate monooxygenase ABUW_1061 PF02350 UDP-N-acetylglucosamine 2-epimerase ABUW_1067 PF03441 FAD binding domain of DNA photolyase ABUW_1067 PF00875 DNA photolyase ABUW_1068 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABUW_1069 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_1070 PF07943 Penicillin-binding protein 5, C-terminal domain ABUW_1070 PF00768 D-alanyl-D-alanine carboxypeptidase ABUW_1072 PF03971 Monomeric isocitrate dehydrogenase ABUW_1073 PF00849 RNA pseudouridylate synthase ABUW_1074 PF00180 Isocitrate/isopropylmalate dehydrogenase ABUW_1078 PF06779 Uncharacterised MFS-type transporter YbfB ABUW_1079 PF03466 LysR substrate binding domain ABUW_1079 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1081 PF02567 Phenazine biosynthesis-like protein ABUW_1082 PF00675 Insulinase (Peptidase family M16) ABUW_1082 PF05193 Peptidase M16 inactive domain ABUW_1087 PF01867 CRISPR associated protein Cas1 ABUW_1089 PF09611 CRISPR-associated protein (Cas_Csy1) ABUW_1090 PF09614 CRISPR-associated protein (Cas_Csy2) ABUW_1091 PF09615 CRISPR-associated protein (Cas_Csy3) ABUW_1097 PF02581 Thiamine monophosphate synthase ABUW_1098 PF00202 Aminotransferase class-III ABUW_1100 PF00849 RNA pseudouridylate synthase ABUW_1101 PF00271 Helicase conserved C-terminal domain ABUW_1101 PF12137 RNA polymerase recycling family C-terminal ABUW_1101 PF00176 SNF2 family N-terminal domain ABUW_1101 PF18339 RapA N-terminal Tudor like domain 1 ABUW_1101 PF18337 RapA N-terminal Tudor like domain ABUW_1103 PF00440 Bacterial regulatory proteins, tetR family ABUW_1104 PF00175 Oxidoreductase NAD-binding domain ABUW_1104 PF00970 Oxidoreductase FAD-binding domain ABUW_1104 PF00111 2Fe-2S iron-sulfur cluster binding domain ABUW_1105 PF00487 Fatty acid desaturase ABUW_1107 PF00440 Bacterial regulatory proteins, tetR family ABUW_1107 PF17754 MftR C-terminal domain ABUW_1109 PF00202 Aminotransferase class-III ABUW_1110 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABUW_1111 PF00171 Aldehyde dehydrogenase family ABUW_1112 PF01037 Lrp/AsnC ligand binding domain ABUW_1113 PF00205 Thiamine pyrophosphate enzyme, central domain ABUW_1113 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABUW_1113 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABUW_1114 PF00324 Amino acid permease ABUW_1115 PF12849 PBP superfamily domain ABUW_1116 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_1117 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_1118 PF00005 ABC transporter ABUW_1119 PF01343 Peptidase family S49 ABUW_1119 PF08496 Peptidase family S49 N-terminal ABUW_1122 PF00206 Lyase ABUW_1122 PF08328 Adenylosuccinate lyase C-terminal ABUW_1123 PF04356 Protein of unknown function (DUF489) ABUW_1125 PF13344 Haloacid dehalogenase-like hydrolase ABUW_1125 PF00293 NUDIX domain ABUW_1126 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_1127 PF00768 D-alanyl-D-alanine carboxypeptidase ABUW_1127 PF07943 Penicillin-binding protein 5, C-terminal domain ABUW_1130 PF01975 Survival protein SurE ABUW_1131 PF01476 LysM domain ABUW_1131 PF01551 Peptidase family M23 ABUW_1132 PF03466 LysR substrate binding domain ABUW_1132 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1133 PF13654 AAA domain ABUW_1133 PF05362 Lon protease (S16) C-terminal proteolytic domain ABUW_1134 PF07690 Major Facilitator Superfamily ABUW_1135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABUW_1136 PF13593 SBF-like CPA transporter family (DUF4137) ABUW_1137 PF01197 Ribosomal protein L31 ABUW_1138 PF12792 CSS motif domain associated with EAL ABUW_1138 PF00563 EAL domain ABUW_1140 PF04055 Radical SAM superfamily ABUW_1141 PF01132 Elongation factor P (EF-P) OB domain ABUW_1141 PF09285 Elongation factor P, C-terminal ABUW_1141 PF08207 Elongation factor P (EF-P) KOW-like domain ABUW_1142 PF13722 5TM C-terminal transporter carbon starvation CstA ABUW_1142 PF02554 Carbon starvation protein CstA ABUW_1143 PF04328 Selenoprotein, putative ABUW_1145 PF03466 LysR substrate binding domain ABUW_1145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1146 PF00557 Metallopeptidase family M24 ABUW_1147 PF02028 BCCT, betaine/carnitine/choline family transporter ABUW_1148 PF02028 BCCT, betaine/carnitine/choline family transporter ABUW_1149 PF00355 Rieske [2Fe-2S] domain ABUW_1149 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABUW_1151 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_1151 PF18113 Rubredoxin binding C-terminal domain ABUW_1152 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABUW_1152 PF01266 FAD dependent oxidoreductase ABUW_1156 PF00892 EamA-like transporter family ABUW_1158 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ABUW_1165 PF17954 Quercetinase C-terminal cupin domain ABUW_1165 PF02678 Pirin ABUW_1166 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_1167 PF08348 YheO-like PAS domain ABUW_1167 PF13309 HTH domain ABUW_1169 PF00501 AMP-binding enzyme ABUW_1169 PF13193 AMP-binding enzyme C-terminal domain ABUW_1169 PF00668 Condensation domain ABUW_1169 PF00550 Phosphopantetheine attachment site ABUW_1170 PF00975 Thioesterase domain ABUW_1170 PF00550 Phosphopantetheine attachment site ABUW_1170 PF00501 AMP-binding enzyme ABUW_1170 PF13193 AMP-binding enzyme C-terminal domain ABUW_1170 PF00668 Condensation domain ABUW_1173 PF01032 FecCD transport family ABUW_1174 PF01032 FecCD transport family ABUW_1175 PF00005 ABC transporter ABUW_1176 PF01497 Periplasmic binding protein ABUW_1177 PF07715 TonB-dependent Receptor Plug Domain ABUW_1177 PF00593 TonB dependent receptor ABUW_1178 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABUW_1179 PF00501 AMP-binding enzyme ABUW_1179 PF00550 Phosphopantetheine attachment site ABUW_1179 PF00668 Condensation domain ABUW_1180 PF13193 AMP-binding enzyme C-terminal domain ABUW_1180 PF00501 AMP-binding enzyme ABUW_1181 PF00550 Phosphopantetheine attachment site ABUW_1181 PF00857 Isochorismatase family ABUW_1182 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABUW_1184 PF00005 ABC transporter ABUW_1184 PF00664 ABC transporter transmembrane region ABUW_1185 PF00005 ABC transporter ABUW_1185 PF00664 ABC transporter transmembrane region ABUW_1186 PF00975 Thioesterase domain ABUW_1188 PF00425 chorismate binding enzyme ABUW_1190 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABUW_1191 PF05675 Protein of unknown function (DUF817) ABUW_1194 PF00144 Beta-lactamase ABUW_1196 PF00111 2Fe-2S iron-sulfur cluster binding domain ABUW_1196 PF01799 [2Fe-2S] binding domain ABUW_1197 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ABUW_1197 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABUW_1200 PF00218 Indole-3-glycerol phosphate synthase ABUW_1201 PF02885 Glycosyl transferase family, helical bundle domain ABUW_1201 PF00591 Glycosyl transferase family, a/b domain ABUW_1202 PF07715 TonB-dependent Receptor Plug Domain ABUW_1202 PF00593 TonB dependent receptor ABUW_1203 PF01433 Peptidase family M1 domain ABUW_1203 PF11838 ERAP1-like C-terminal domain ABUW_1204 PF00117 Glutamine amidotransferase class-I ABUW_1206 PF00854 POT family ABUW_1208 PF04345 Chorismate lyase ABUW_1209 PF01040 UbiA prenyltransferase family ABUW_1216 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABUW_1216 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABUW_1217 PF01784 NIF3 (NGG1p interacting factor 3) ABUW_1218 PF13180 PDZ domain ABUW_1219 PF01743 Poly A polymerase head domain ABUW_1219 PF12627 Probable RNA and SrmB- binding site of polymerase A ABUW_1220 PF01515 Phosphate acetyl/butaryl transferase ABUW_1220 PF00390 Malic enzyme, N-terminal domain ABUW_1220 PF03949 Malic enzyme, NAD binding domain ABUW_1221 PF00990 Diguanylate cyclase, GGDEF domain ABUW_1221 PF00563 EAL domain ABUW_1221 PF03707 Bacterial signalling protein N terminal repeat ABUW_1222 PF04452 RNA methyltransferase ABUW_1223 PF02219 Methylenetetrahydrofolate reductase ABUW_1224 PF05221 S-adenosyl-L-homocysteine hydrolase ABUW_1224 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ABUW_1227 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_1227 PF09317 Domain of unknown function (DUF1974) ABUW_1227 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_1228 PF04055 Radical SAM superfamily ABUW_1229 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABUW_1229 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_1232 PF07690 Major Facilitator Superfamily ABUW_1234 PF00557 Metallopeptidase family M24 ABUW_1235 PF00318 Ribosomal protein S2 ABUW_1236 PF00889 Elongation factor TS ABUW_1238 PF12833 Helix-turn-helix domain ABUW_1242 PF05036 Sporulation related domain ABUW_1242 PF03330 Lytic transglycolase ABUW_1243 PF13406 Transglycosylase SLT domain ABUW_1244 PF01098 Cell cycle protein ABUW_1246 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ABUW_1246 PF14489 QueF-like protein ABUW_1247 PF01061 ABC-2 type transporter ABUW_1248 PF00005 ABC transporter ABUW_1249 PF00589 Phage integrase family ABUW_1257 PF12684 PDDEXK-like domain of unknown function (DUF3799) ABUW_1257 PF06630 Enterobacterial exodeoxyribonuclease VIII ABUW_1271 PF03796 DnaB-like helicase C terminal domain ABUW_1271 PF00772 DnaB-like helicase N terminal domain ABUW_1316 PF08525 Opacity-associated protein A N-terminal motif ABUW_1316 PF01476 LysM domain ABUW_1316 PF01551 Peptidase family M23 ABUW_1333 PF00464 Serine hydroxymethyltransferase ABUW_1334 PF02321 Outer membrane efflux protein ABUW_1335 PF00873 AcrB/AcrD/AcrF family ABUW_1336 PF13533 Biotin-lipoyl like ABUW_1338 PF03466 LysR substrate binding domain ABUW_1338 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1339 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABUW_1340 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_1341 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_1343 PF00893 Small Multidrug Resistance protein ABUW_1344 PF00037 4Fe-4S binding domain ABUW_1346 PF00392 Bacterial regulatory proteins, gntR family ABUW_1346 PF00155 Aminotransferase class I and II ABUW_1347 PF02567 Phenazine biosynthesis-like protein ABUW_1348 PF00970 Oxidoreductase FAD-binding domain ABUW_1348 PF00175 Oxidoreductase NAD-binding domain ABUW_1349 PF01980 tRNA-methyltransferase O ABUW_1349 PF18389 TrmO C-terminal domain ABUW_1351 PF00437 Type II/IV secretion system protein ABUW_1353 PF00486 Transcriptional regulatory protein, C terminal ABUW_1353 PF00072 Response regulator receiver domain ABUW_1354 PF00512 His Kinase A (phospho-acceptor) domain ABUW_1354 PF08521 Two-component sensor kinase N-terminal ABUW_1354 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_1356 PF00293 NUDIX domain ABUW_1358 PF00912 Transglycosylase ABUW_1358 PF00905 Penicillin binding protein transpeptidase domain ABUW_1358 PF14814 Bifunctional transglycosylase second domain ABUW_1359 PF01513 ATP-NAD kinase ABUW_1360 PF07023 Protein of unknown function (DUF1315) ABUW_1361 PF02885 Glycosyl transferase family, helical bundle domain ABUW_1361 PF00591 Glycosyl transferase family, a/b domain ABUW_1362 PF00375 Sodium:dicarboxylate symporter family ABUW_1363 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_1363 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_1363 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_1364 PF00756 Putative esterase ABUW_1365 PF01842 ACT domain ABUW_1365 PF01817 Chorismate mutase type II ABUW_1365 PF00800 Prephenate dehydratase ABUW_1366 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABUW_1368 PF07687 Peptidase dimerisation domain ABUW_1368 PF01546 Peptidase family M20/M25/M40 ABUW_1369 PF00753 Metallo-beta-lactamase superfamily ABUW_1371 PF03883 Peroxide stress protein YaaA ABUW_1372 PF05690 Thiazole biosynthesis protein ThiG ABUW_1374 PF04241 Protein of unknown function (DUF423) ABUW_1375 PF00140 Sigma-70 factor, region 1.2 ABUW_1375 PF04542 Sigma-70 region 2 ABUW_1375 PF04545 Sigma-70, region 4 ABUW_1377 PF00313 'Cold-shock' DNA-binding domain ABUW_1378 PF00270 DEAD/DEAH box helicase ABUW_1378 PF00271 Helicase conserved C-terminal domain ABUW_1380 PF00881 Nitroreductase family ABUW_1381 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABUW_1381 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABUW_1383 PF00589 Phage integrase family ABUW_1385 PF00872 Transposase, Mutator family ABUW_1400 PF00717 Peptidase S24-like ABUW_1427 PF00583 Acetyltransferase (GNAT) family ABUW_1444 PF01180 Dihydroorotate dehydrogenase ABUW_1445 PF02674 Colicin V production protein ABUW_1446 PF00156 Phosphoribosyl transferase domain ABUW_1449 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABUW_1449 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABUW_1450 PF01435 Peptidase family M48 ABUW_1451 PF09424 Yqey-like protein ABUW_1452 PF01165 Ribosomal protein S21 ABUW_1453 PF00814 Glycoprotease family ABUW_1457 PF00069 Protein kinase domain ABUW_1462 PF03466 LysR substrate binding domain ABUW_1462 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1463 PF00202 Aminotransferase class-III ABUW_1464 PF00171 Aldehyde dehydrogenase family ABUW_1465 PF00324 Amino acid permease ABUW_1471 PF04076 Bacterial OB fold (BOF) protein ABUW_1476 PF00561 alpha/beta hydrolase fold ABUW_1477 PF03616 Sodium/glutamate symporter ABUW_1479 PF03466 LysR substrate binding domain ABUW_1479 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1480 PF00248 Aldo/keto reductase family ABUW_1481 PF00106 short chain dehydrogenase ABUW_1484 PF07729 FCD domain ABUW_1484 PF00392 Bacterial regulatory proteins, gntR family ABUW_1496 PF00083 Sugar (and other) transporter ABUW_1496 PF08946 Osmosensory transporter coiled coil ABUW_1501 PF04403 Paraquat-inducible protein A ABUW_1502 PF02470 MlaD protein ABUW_1504 PF00576 HIUase/Transthyretin family ABUW_1506 PF00486 Transcriptional regulatory protein, C terminal ABUW_1506 PF00072 Response regulator receiver domain ABUW_1507 PF00512 His Kinase A (phospho-acceptor) domain ABUW_1507 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_1507 PF00672 HAMP domain ABUW_1514 PF08521 Two-component sensor kinase N-terminal ABUW_1514 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_1514 PF00512 His Kinase A (phospho-acceptor) domain ABUW_1515 PF00072 Response regulator receiver domain ABUW_1515 PF00486 Transcriptional regulatory protein, C terminal ABUW_1519 PF01177 Asp/Glu/Hydantoin racemase ABUW_1520 PF00892 EamA-like transporter family ABUW_1521 PF07995 Glucose / Sorbosone dehydrogenase ABUW_1525 PF00375 Sodium:dicarboxylate symporter family ABUW_1527 PF16123 Hydroxyacylglutathione hydrolase C-terminus ABUW_1527 PF00753 Metallo-beta-lactamase superfamily ABUW_1528 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_1529 PF00005 ABC transporter ABUW_1529 PF09383 NIL domain ABUW_1530 PF03180 NLPA lipoprotein ABUW_1531 PF02844 Phosphoribosylglycinamide synthetase, N domain ABUW_1531 PF02843 Phosphoribosylglycinamide synthetase, C domain ABUW_1531 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABUW_1532 PF01808 AICARFT/IMPCHase bienzyme ABUW_1532 PF02142 MGS-like domain ABUW_1533 PF02954 Bacterial regulatory protein, Fis family ABUW_1537 PF01134 Glucose inhibited division protein A ABUW_1537 PF13932 GidA associated domain ABUW_1540 PF14403 Circularly permuted ATP-grasp type 2 ABUW_1542 PF01841 Transglutaminase-like superfamily ABUW_1542 PF08379 Bacterial transglutaminase-like N-terminal region ABUW_1544 PF00842 Alanine racemase, C-terminal domain ABUW_1544 PF01168 Alanine racemase, N-terminal domain ABUW_1545 PF03796 DnaB-like helicase C terminal domain ABUW_1545 PF00772 DnaB-like helicase N terminal domain ABUW_1546 PF01281 Ribosomal protein L9, N-terminal domain ABUW_1546 PF03948 Ribosomal protein L9, C-terminal domain ABUW_1547 PF01084 Ribosomal protein S18 ABUW_1548 PF01250 Ribosomal protein S6 ABUW_1549 PF01040 UbiA prenyltransferase family ABUW_1550 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABUW_1551 PF00510 Cytochrome c oxidase subunit III ABUW_1552 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABUW_1553 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABUW_1553 PF06481 COX Aromatic Rich Motif ABUW_1555 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ABUW_1555 PF00391 PEP-utilising enzyme, mobile domain ABUW_1555 PF02896 PEP-utilising enzyme, TIM barrel domain ABUW_1556 PF03618 Kinase/pyrophosphorylase ABUW_1558 PF14883 Hypothetical glycosyl hydrolase family 13 ABUW_1558 PF01522 Polysaccharide deacetylase ABUW_1559 PF00535 Glycosyl transferase family 2 ABUW_1560 PF13994 PgaD-like protein ABUW_1562 PF00296 Luciferase-like monooxygenase ABUW_1565 PF03466 LysR substrate binding domain ABUW_1565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1567 PF00472 RF-1 domain ABUW_1567 PF03462 PCRF domain ABUW_1568 PF13847 Methyltransferase domain ABUW_1568 PF17827 PrmC N-terminal domain ABUW_1569 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_1570 PF09084 NMT1/THI5 like ABUW_1571 PF12833 Helix-turn-helix domain ABUW_1572 PF00106 short chain dehydrogenase ABUW_1573 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_1573 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_1573 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_1574 PF00501 AMP-binding enzyme ABUW_1574 PF13193 AMP-binding enzyme C-terminal domain ABUW_1575 PF01613 Flavin reductase like domain ABUW_1576 PF00899 ThiF family ABUW_1577 PF03109 ABC1 family ABUW_1581 PF03814 Potassium-transporting ATPase A subunit ABUW_1583 PF02669 K+-transporting ATPase, c chain ABUW_1584 PF00512 His Kinase A (phospho-acceptor) domain ABUW_1584 PF02702 Osmosensitive K+ channel His kinase sensor domain ABUW_1584 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_1584 PF13493 Domain of unknown function (DUF4118) ABUW_1585 PF00072 Response regulator receiver domain ABUW_1585 PF00486 Transcriptional regulatory protein, C terminal ABUW_1586 PF00120 Glutamine synthetase, catalytic domain ABUW_1588 PF03232 Ubiquinone biosynthesis protein COQ7 ABUW_1589 PF07690 Major Facilitator Superfamily ABUW_1590 PF01103 Surface antigen ABUW_1590 PF07244 Surface antigen variable number repeat ABUW_1590 PF17243 POTRA domain TamA domain 1 ABUW_1593 PF11791 Aconitate B N-terminal domain ABUW_1593 PF06434 Aconitate hydratase 2 N-terminus ABUW_1593 PF00330 Aconitase family (aconitate hydratase) ABUW_1595 PF00520 Ion transport protein ABUW_1595 PF00027 Cyclic nucleotide-binding domain ABUW_1596 PF07690 Major Facilitator Superfamily ABUW_1599 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1599 PF03466 LysR substrate binding domain ABUW_1600 PF04284 Protein of unknown function (DUF441) ABUW_1602 PF00849 RNA pseudouridylate synthase ABUW_1602 PF01479 S4 domain ABUW_1605 PF00849 RNA pseudouridylate synthase ABUW_1605 PF01479 S4 domain ABUW_1606 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABUW_1607 PF01119 DNA mismatch repair protein, C-terminal domain ABUW_1607 PF08676 MutL C terminal dimerisation domain ABUW_1609 PF17209 Hfq protein ABUW_1611 PF00881 Nitroreductase family ABUW_1613 PF00149 Calcineurin-like phosphoesterase ABUW_1614 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABUW_1615 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABUW_1615 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ABUW_1617 PF02540 NAD synthase ABUW_1617 PF00117 Glutamine amidotransferase class-I ABUW_1617 PF00958 GMP synthase C terminal domain ABUW_1618 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ABUW_1619 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ABUW_1620 PF13520 Amino acid permease ABUW_1621 PF00171 Aldehyde dehydrogenase family ABUW_1624 PF00465 Iron-containing alcohol dehydrogenase ABUW_1625 PF14493 Helix-turn-helix domain ABUW_1625 PF05970 PIF1-like helicase ABUW_1627 PF02110 Hydroxyethylthiazole kinase family ABUW_1630 PF01433 Peptidase family M1 domain ABUW_1630 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ABUW_1630 PF11940 Domain of unknown function (DUF3458) Ig-like fold ABUW_1633 PF13953 PapC C-terminal domain ABUW_1633 PF13954 PapC N-terminal domain ABUW_1633 PF00577 Outer membrane usher protein ABUW_1638 PF01817 Chorismate mutase type II ABUW_1639 PF01037 Lrp/AsnC ligand binding domain ABUW_1642 PF02224 Cytidylate kinase ABUW_1645 PF00440 Bacterial regulatory proteins, tetR family ABUW_1646 PF00593 TonB dependent receptor ABUW_1646 PF07715 TonB-dependent Receptor Plug Domain ABUW_1648 PF00924 Mechanosensitive ion channel ABUW_1655 PF00593 TonB dependent receptor ABUW_1655 PF07715 TonB-dependent Receptor Plug Domain ABUW_1660 PF00005 ABC transporter ABUW_1660 PF12848 ABC transporter ABUW_1661 PF00582 Universal stress protein family ABUW_1666 PF00689 Cation transporting ATPase, C-terminus ABUW_1666 PF00690 Cation transporter/ATPase, N-terminus ABUW_1668 PF03594 Benzoate membrane transport protein ABUW_1669 PF01037 Lrp/AsnC ligand binding domain ABUW_1670 PF01810 LysE type translocator ABUW_1672 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1672 PF03466 LysR substrate binding domain ABUW_1674 PF02803 Thiolase, C-terminal domain ABUW_1674 PF00108 Thiolase, N-terminal domain ABUW_1679 PF07690 Major Facilitator Superfamily ABUW_1680 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ABUW_1680 PF12170 DNA polymerase III tau subunit V interacting with alpha ABUW_1680 PF12169 DNA polymerase III subunits gamma and tau domain III ABUW_1682 PF05506 Domain of unknown function (DUF756) ABUW_1682 PF04185 Phosphoesterase family ABUW_1683 PF03061 Thioesterase superfamily ABUW_1684 PF00465 Iron-containing alcohol dehydrogenase ABUW_1686 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABUW_1687 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABUW_1687 PF01565 FAD binding domain ABUW_1690 PF01645 Conserved region in glutamate synthase ABUW_1694 PF12832 MFS_1 like family ABUW_1696 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABUW_1696 PF02785 Biotin carboxylase C-terminal domain ABUW_1696 PF00289 Biotin carboxylase, N-terminal domain ABUW_1697 PF00364 Biotin-requiring enzyme ABUW_1698 PF01220 Dehydroquinase class II ABUW_1699 PF13438 Domain of unknown function (DUF4113) ABUW_1699 PF00817 impB/mucB/samB family ABUW_1699 PF11799 impB/mucB/samB family C-terminal domain ABUW_1701 PF00005 ABC transporter ABUW_1702 PF00486 Transcriptional regulatory protein, C terminal ABUW_1702 PF00072 Response regulator receiver domain ABUW_1704 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_1704 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABUW_1704 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABUW_1704 PF04324 BFD-like [2Fe-2S] binding domain ABUW_1704 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABUW_1704 PF13806 Rieske-like [2Fe-2S] domain ABUW_1705 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABUW_1705 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_1705 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABUW_1705 PF04324 BFD-like [2Fe-2S] binding domain ABUW_1705 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABUW_1706 PF04324 BFD-like [2Fe-2S] binding domain ABUW_1706 PF01568 Molydopterin dinucleotide binding domain ABUW_1706 PF00384 Molybdopterin oxidoreductase ABUW_1706 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABUW_1707 PF12804 MobA-like NTP transferase domain ABUW_1708 PF00384 Molybdopterin oxidoreductase ABUW_1708 PF01568 Molydopterin dinucleotide binding domain ABUW_1708 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABUW_1709 PF04055 Radical SAM superfamily ABUW_1709 PF06463 Molybdenum Cofactor Synthesis C ABUW_1711 PF02391 MoaE protein ABUW_1712 PF01967 MoaC family ABUW_1712 PF00994 Probable molybdopterin binding domain ABUW_1713 PF03453 MoeA N-terminal region (domain I and II) ABUW_1713 PF03454 MoeA C-terminal region (domain IV) ABUW_1713 PF00994 Probable molybdopterin binding domain ABUW_1714 PF01638 HxlR-like helix-turn-helix ABUW_1715 PF00392 Bacterial regulatory proteins, gntR family ABUW_1715 PF00155 Aminotransferase class I and II ABUW_1716 PF00892 EamA-like transporter family ABUW_1720 PF02635 DsrE/DsrF-like family ABUW_1721 PF16363 GDP-mannose 4,6 dehydratase ABUW_1722 PF10415 Fumarase C C-terminus ABUW_1722 PF00206 Lyase ABUW_1726 PF01266 FAD dependent oxidoreductase ABUW_1728 PF02542 YgbB family ABUW_1730 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABUW_1730 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABUW_1731 PF00440 Bacterial regulatory proteins, tetR family ABUW_1732 PF00158 Sigma-54 interaction domain ABUW_1732 PF02954 Bacterial regulatory protein, Fis family ABUW_1732 PF00072 Response regulator receiver domain ABUW_1733 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_1733 PF00512 His Kinase A (phospho-acceptor) domain ABUW_1733 PF00989 PAS fold ABUW_1734 PF18693 TRAM domain ABUW_1734 PF04055 Radical SAM superfamily ABUW_1734 PF00919 Uncharacterized protein family UPF0004 ABUW_1735 PF00696 Amino acid kinase family ABUW_1736 PF01765 Ribosome recycling factor ABUW_1737 PF01255 Putative undecaprenyl diphosphate synthase ABUW_1739 PF13288 DXP reductoisomerase C-terminal domain ABUW_1739 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABUW_1739 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABUW_1740 PF02163 Peptidase family M50 ABUW_1740 PF17820 PDZ domain ABUW_1740 PF13180 PDZ domain ABUW_1741 PF01103 Surface antigen ABUW_1741 PF07244 Surface antigen variable number repeat ABUW_1743 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ABUW_1743 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_1744 PF07977 FabA-like domain ABUW_1745 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ABUW_1745 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_1747 PF02631 RecX family ABUW_1748 PF00154 recA bacterial DNA recombination protein ABUW_1749 PF01479 S4 domain ABUW_1750 PF13419 Haloacid dehalogenase-like hydrolase ABUW_1755 PF01037 Lrp/AsnC ligand binding domain ABUW_1756 PF00266 Aminotransferase class-V ABUW_1757 PF00324 Amino acid permease ABUW_1759 PF05922 Peptidase inhibitor I9 ABUW_1759 PF00082 Subtilase family ABUW_1760 PF01740 STAS domain ABUW_1760 PF00916 Sulfate permease family ABUW_1761 PF02586 SOS response associated peptidase (SRAP) ABUW_1762 PF07995 Glucose / Sorbosone dehydrogenase ABUW_1764 PF00563 EAL domain ABUW_1764 PF00990 Diguanylate cyclase, GGDEF domain ABUW_1764 PF03707 Bacterial signalling protein N terminal repeat ABUW_1766 PF13737 Transposase DDE domain ABUW_1770 PF02378 Phosphotransferase system, EIIC ABUW_1770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABUW_1771 PF00294 pfkB family carbohydrate kinase ABUW_1772 PF02896 PEP-utilising enzyme, TIM barrel domain ABUW_1772 PF00381 PTS HPr component phosphorylation site ABUW_1772 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABUW_1772 PF00391 PEP-utilising enzyme, mobile domain ABUW_1772 PF05524 PEP-utilising enzyme, N-terminal ABUW_1777 PF05525 Branched-chain amino acid transport protein ABUW_1778 PF00557 Metallopeptidase family M24 ABUW_1779 PF03466 LysR substrate binding domain ABUW_1779 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1781 PF00462 Glutaredoxin ABUW_1782 PF00202 Aminotransferase class-III ABUW_1783 PF00571 CBS domain ABUW_1783 PF00478 IMP dehydrogenase / GMP reductase domain ABUW_1789 PF02881 SRP54-type protein, helical bundle domain ABUW_1789 PF00448 SRP54-type protein, GTPase domain ABUW_1791 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ABUW_1793 PF08173 Membrane bound YbgT-like protein ABUW_1794 PF02322 Cytochrome bd terminal oxidase subunit II ABUW_1795 PF01654 Cytochrome bd terminal oxidase subunit I ABUW_1797 PF07290 Protein of unknown function (DUF1449) ABUW_1799 PF00294 pfkB family carbohydrate kinase ABUW_1800 PF07715 TonB-dependent Receptor Plug Domain ABUW_1800 PF00593 TonB dependent receptor ABUW_1802 PF08367 Peptidase M16C associated ABUW_1802 PF05193 Peptidase M16 inactive domain ABUW_1802 PF00675 Insulinase (Peptidase family M16) ABUW_1803 PF02253 Phospholipase A1 ABUW_1804 PF02386 Cation transport protein ABUW_1805 PF02254 TrkA-N domain ABUW_1805 PF02080 TrkA-C domain ABUW_1806 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_1806 PF00585 C-terminal regulatory domain of Threonine dehydratase ABUW_1807 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ABUW_1811 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABUW_1811 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABUW_1813 PF02617 ATP-dependent Clp protease adaptor protein ClpS ABUW_1814 PF17871 AAA lid domain ABUW_1814 PF00004 ATPase family associated with various cellular activities (AAA) ABUW_1814 PF10431 C-terminal, D2-small domain, of ClpB protein ABUW_1814 PF07724 AAA domain (Cdc48 subfamily) ABUW_1814 PF02861 Clp amino terminal domain, pathogenicity island component ABUW_1815 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ABUW_1816 PF00793 DAHP synthetase I family ABUW_1819 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_1819 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABUW_1825 PF00117 Glutamine amidotransferase class-I ABUW_1825 PF06418 CTP synthase N-terminus ABUW_1826 PF00793 DAHP synthetase I family ABUW_1827 PF03952 Enolase, N-terminal domain ABUW_1827 PF00113 Enolase, C-terminal TIM barrel domain ABUW_1828 PF04239 Protein of unknown function (DUF421) ABUW_1829 PF04977 Septum formation initiator ABUW_1830 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABUW_1831 PF01144 Coenzyme A transferase ABUW_1832 PF01144 Coenzyme A transferase ABUW_1833 PF00108 Thiolase, N-terminal domain ABUW_1833 PF02803 Thiolase, C-terminal domain ABUW_1834 PF10397 Adenylosuccinate lyase C-terminus ABUW_1834 PF00206 Lyase ABUW_1835 PF00561 alpha/beta hydrolase fold ABUW_1836 PF07690 Major Facilitator Superfamily ABUW_1837 PF02627 Carboxymuconolactone decarboxylase family ABUW_1838 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ABUW_1838 PF00775 Dioxygenase ABUW_1839 PF00775 Dioxygenase ABUW_1840 PF01487 Type I 3-dehydroquinase ABUW_1841 PF05048 Periplasmic copper-binding protein (NosD) ABUW_1842 PF04966 Carbohydrate-selective porin, OprB family ABUW_1843 PF01011 PQQ enzyme repeat ABUW_1843 PF13360 PQQ-like domain ABUW_1845 PF04143 Sulphur transport ABUW_1847 PF00753 Metallo-beta-lactamase superfamily ABUW_1848 PF01614 Bacterial transcriptional regulator ABUW_1848 PF09339 IclR helix-turn-helix domain ABUW_1849 PF03466 LysR substrate binding domain ABUW_1849 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_1850 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_1850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_1853 PF00106 short chain dehydrogenase ABUW_1855 PF07690 Major Facilitator Superfamily ABUW_1857 PF01425 Amidase ABUW_1858 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABUW_1861 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABUW_1861 PF00355 Rieske [2Fe-2S] domain ABUW_1864 PF00111 2Fe-2S iron-sulfur cluster binding domain ABUW_1864 PF00175 Oxidoreductase NAD-binding domain ABUW_1865 PF01613 Flavin reductase like domain ABUW_1866 PF02311 AraC-like ligand binding domain ABUW_1866 PF12833 Helix-turn-helix domain ABUW_1867 PF01179 Copper amine oxidase, enzyme domain ABUW_1867 PF07833 Copper amine oxidase N-terminal domain ABUW_1867 PF02727 Copper amine oxidase, N2 domain ABUW_1867 PF02728 Copper amine oxidase, N3 domain ABUW_1869 PF00171 Aldehyde dehydrogenase family ABUW_1870 PF01804 Penicillin amidase ABUW_1871 PF12146 Serine aminopeptidase, S33 ABUW_1872 PF02803 Thiolase, C-terminal domain ABUW_1872 PF00108 Thiolase, N-terminal domain ABUW_1873 PF01144 Coenzyme A transferase ABUW_1874 PF01144 Coenzyme A transferase ABUW_1875 PF00775 Dioxygenase ABUW_1875 PF04444 Catechol dioxygenase N terminus ABUW_1876 PF02426 Muconolactone delta-isomerase ABUW_1877 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABUW_1877 PF13378 Enolase C-terminal domain-like ABUW_1878 PF03466 LysR substrate binding domain ABUW_1878 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1880 PF00392 Bacterial regulatory proteins, gntR family ABUW_1880 PF07729 FCD domain ABUW_1881 PF00920 Dehydratase family ABUW_1884 PF00171 Aldehyde dehydrogenase family ABUW_1886 PF00561 alpha/beta hydrolase fold ABUW_1887 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABUW_1887 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_1888 PF00106 short chain dehydrogenase ABUW_1890 PF00376 MerR family regulatory protein ABUW_1890 PF09278 MerR, DNA binding ABUW_1892 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_1894 PF12706 Beta-lactamase superfamily domain ABUW_1895 PF00440 Bacterial regulatory proteins, tetR family ABUW_1895 PF08359 YsiA-like protein, C-terminal region ABUW_1896 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABUW_1896 PF12833 Helix-turn-helix domain ABUW_1897 PF00106 short chain dehydrogenase ABUW_1898 PF06314 Acetoacetate decarboxylase (ADC) ABUW_1900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABUW_1902 PF07995 Glucose / Sorbosone dehydrogenase ABUW_1905 PF00857 Isochorismatase family ABUW_1906 PF03466 LysR substrate binding domain ABUW_1906 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1907 PF07995 Glucose / Sorbosone dehydrogenase ABUW_1908 PF00999 Sodium/hydrogen exchanger family ABUW_1908 PF02254 TrkA-N domain ABUW_1910 PF07687 Peptidase dimerisation domain ABUW_1910 PF01546 Peptidase family M20/M25/M40 ABUW_1920 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) ABUW_1921 PF07690 Major Facilitator Superfamily ABUW_1922 PF04909 Amidohydrolase ABUW_1925 PF08450 SMP-30/Gluconolactonase/LRE-like region ABUW_1927 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1927 PF03466 LysR substrate binding domain ABUW_1930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABUW_1930 PF00529 HlyD membrane-fusion protein of T1SS ABUW_1933 PF00171 Aldehyde dehydrogenase family ABUW_1934 PF00920 Dehydratase family ABUW_1936 PF03466 LysR substrate binding domain ABUW_1936 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1937 PF01370 NAD dependent epimerase/dehydratase family ABUW_1938 PF07690 Major Facilitator Superfamily ABUW_1939 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABUW_1939 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABUW_1942 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABUW_1942 PF14572 Phosphoribosyl synthetase-associated domain ABUW_1943 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABUW_1947 PF03472 Autoinducer binding domain ABUW_1947 PF00196 Bacterial regulatory proteins, luxR family ABUW_1948 PF01425 Amidase ABUW_1949 PF13533 Biotin-lipoyl like ABUW_1950 PF07690 Major Facilitator Superfamily ABUW_1955 PF01975 Survival protein SurE ABUW_1957 PF02824 TGS domain ABUW_1957 PF13291 ACT domain ABUW_1957 PF04607 Region found in RelA / SpoT proteins ABUW_1958 PF00271 Helicase conserved C-terminal domain ABUW_1958 PF17757 UvrB interaction domain ABUW_1958 PF12344 Ultra-violet resistance protein B ABUW_1958 PF02151 UvrB/uvrC motif ABUW_1958 PF04851 Type III restriction enzyme, res subunit ABUW_1964 PF13673 Acetyltransferase (GNAT) domain ABUW_1965 PF12146 Serine aminopeptidase, S33 ABUW_1966 PF03466 LysR substrate binding domain ABUW_1966 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1969 PF12146 Serine aminopeptidase, S33 ABUW_1970 PF02311 AraC-like ligand binding domain ABUW_1970 PF12833 Helix-turn-helix domain ABUW_1972 PF00512 His Kinase A (phospho-acceptor) domain ABUW_1972 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_1972 PF00672 HAMP domain ABUW_1972 PF16527 Two-component sensor protein CpxA, periplasmic domain ABUW_1973 PF00072 Response regulator receiver domain ABUW_1973 PF00486 Transcriptional regulatory protein, C terminal ABUW_1974 PF00529 HlyD membrane-fusion protein of T1SS ABUW_1974 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABUW_1975 PF00873 AcrB/AcrD/AcrF family ABUW_1976 PF02321 Outer membrane efflux protein ABUW_1977 PF12146 Serine aminopeptidase, S33 ABUW_1978 PF00743 Flavin-binding monooxygenase-like ABUW_1980 PF01266 FAD dependent oxidoreductase ABUW_2052 PF16970 Type-1 fimbrial protein, A ABUW_2053 PF02753 Pili assembly chaperone PapD, C-terminal domain ABUW_2053 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABUW_2054 PF00577 Outer membrane usher protein ABUW_2054 PF13954 PapC N-terminal domain ABUW_2054 PF13953 PapC C-terminal domain ABUW_2057 PF08240 Alcohol dehydrogenase GroES-like domain ABUW_2057 PF00107 Zinc-binding dehydrogenase ABUW_2059 PF00199 Catalase ABUW_2062 PF13091 PLD-like domain ABUW_2066 PF01244 Membrane dipeptidase (Peptidase family M19) ABUW_2067 PF13186 Iron-sulfur cluster-binding domain ABUW_2067 PF04055 Radical SAM superfamily ABUW_2068 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ABUW_2069 PF03070 TENA/THI-4/PQQC family ABUW_2070 PF12706 Beta-lactamase superfamily domain ABUW_2071 PF08042 PqqA family ABUW_2072 PF13089 Polyphosphate kinase N-terminal domain ABUW_2072 PF17941 Polyphosphate kinase C-terminal domain 1 ABUW_2072 PF13090 Polyphosphate kinase C-terminal domain 2 ABUW_2072 PF02503 Polyphosphate kinase middle domain ABUW_2073 PF00149 Calcineurin-like phosphoesterase ABUW_2075 PF00857 Isochorismatase family ABUW_2075 PF00550 Phosphopantetheine attachment site ABUW_2076 PF00106 short chain dehydrogenase ABUW_2077 PF00005 ABC transporter ABUW_2077 PF03459 TOBE domain ABUW_2078 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2080 PF03459 TOBE domain ABUW_2081 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABUW_2081 PF00355 Rieske [2Fe-2S] domain ABUW_2082 PF00866 Ring hydroxylating beta subunit ABUW_2083 PF00970 Oxidoreductase FAD-binding domain ABUW_2083 PF00111 2Fe-2S iron-sulfur cluster binding domain ABUW_2083 PF00175 Oxidoreductase NAD-binding domain ABUW_2084 PF14525 AraC-binding-like domain ABUW_2084 PF12833 Helix-turn-helix domain ABUW_2086 PF01613 Flavin reductase like domain ABUW_2089 PF01738 Dienelactone hydrolase family ABUW_2090 PF07690 Major Facilitator Superfamily ABUW_2091 PF12833 Helix-turn-helix domain ABUW_2091 PF06719 AraC-type transcriptional regulator N-terminus ABUW_2095 PF03466 LysR substrate binding domain ABUW_2095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2096 PF01144 Coenzyme A transferase ABUW_2097 PF01144 Coenzyme A transferase ABUW_2098 PF02667 Short chain fatty acid transporter ABUW_2099 PF00108 Thiolase, N-terminal domain ABUW_2099 PF02803 Thiolase, C-terminal domain ABUW_2100 PF03466 LysR substrate binding domain ABUW_2100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2101 PF03466 LysR substrate binding domain ABUW_2101 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2104 PF10415 Fumarase C C-terminus ABUW_2104 PF00206 Lyase ABUW_2105 PF07715 TonB-dependent Receptor Plug Domain ABUW_2105 PF00593 TonB dependent receptor ABUW_2106 PF00083 Sugar (and other) transporter ABUW_2109 PF00005 ABC transporter ABUW_2110 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2111 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABUW_2116 PF02525 Flavodoxin-like fold ABUW_2117 PF01638 HxlR-like helix-turn-helix ABUW_2118 PF12833 Helix-turn-helix domain ABUW_2118 PF06445 GyrI-like small molecule binding domain ABUW_2121 PF01925 Sulfite exporter TauE/SafE ABUW_2122 PF00753 Metallo-beta-lactamase superfamily ABUW_2122 PF04273 Putative phosphatase (DUF442) ABUW_2123 PF04273 Putative phosphatase (DUF442) ABUW_2123 PF00753 Metallo-beta-lactamase superfamily ABUW_2124 PF02954 Bacterial regulatory protein, Fis family ABUW_2124 PF00072 Response regulator receiver domain ABUW_2124 PF00158 Sigma-54 interaction domain ABUW_2125 PF01062 Bestrophin, RFP-TM, chloride channel ABUW_2126 PF00107 Zinc-binding dehydrogenase ABUW_2126 PF08240 Alcohol dehydrogenase GroES-like domain ABUW_2127 PF00106 short chain dehydrogenase ABUW_2128 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABUW_2128 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_2129 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABUW_2129 PF02817 e3 binding domain ABUW_2129 PF00364 Biotin-requiring enzyme ABUW_2130 PF02779 Transketolase, pyrimidine binding domain ABUW_2130 PF02780 Transketolase, C-terminal domain ABUW_2131 PF00676 Dehydrogenase E1 component ABUW_2132 PF04055 Radical SAM superfamily ABUW_2135 PF00990 Diguanylate cyclase, GGDEF domain ABUW_2135 PF08448 PAS fold ABUW_2136 PF01264 Chorismate synthase ABUW_2137 PF05175 Methyltransferase small domain ABUW_2138 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_2140 PF00004 ATPase family associated with various cellular activities (AAA) ABUW_2140 PF17862 AAA+ lid domain ABUW_2140 PF01434 Peptidase family M41 ABUW_2142 PF05166 YcgL domain ABUW_2146 PF00570 HRDC domain ABUW_2146 PF01612 3'-5' exonuclease ABUW_2147 PF13662 Toprim domain ABUW_2147 PF02132 RecR protein ABUW_2148 PF02575 YbaB/EbfC DNA-binding family ABUW_2150 PF01053 Cys/Met metabolism PLP-dependent enzyme ABUW_2151 PF00561 alpha/beta hydrolase fold ABUW_2152 PF08241 Methyltransferase domain ABUW_2159 PF01230 HIT domain ABUW_2164 PF02684 Lipid-A-disaccharide synthetase ABUW_2165 PF00593 TonB dependent receptor ABUW_2165 PF07715 TonB-dependent Receptor Plug Domain ABUW_2169 PF01925 Sulfite exporter TauE/SafE ABUW_2170 PF00793 DAHP synthetase I family ABUW_2171 PF02654 Cobalamin-5-phosphate synthase ABUW_2173 PF00300 Histidine phosphatase superfamily (branch 1) ABUW_2174 PF02277 Phosphoribosyltransferase ABUW_2175 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ABUW_2177 PF13419 Haloacid dehalogenase-like hydrolase ABUW_2182 PF07715 TonB-dependent Receptor Plug Domain ABUW_2182 PF00593 TonB dependent receptor ABUW_2183 PF03737 Aldolase/RraA ABUW_2185 PF06276 Ferric iron reductase FhuF-like transporter ABUW_2185 PF04183 IucA / IucC family ABUW_2186 PF04183 IucA / IucC family ABUW_2186 PF06276 Ferric iron reductase FhuF-like transporter ABUW_2187 PF07690 Major Facilitator Superfamily ABUW_2188 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABUW_2189 PF06276 Ferric iron reductase FhuF-like transporter ABUW_2189 PF04183 IucA / IucC family ABUW_2190 PF04073 Aminoacyl-tRNA editing domain ABUW_2192 PF03109 ABC1 family ABUW_2193 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_2193 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_2193 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2194 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2194 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_2194 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_2195 PF00487 Fatty acid desaturase ABUW_2196 PF12852 Cupin ABUW_2196 PF12833 Helix-turn-helix domain ABUW_2197 PF09312 SurA N-terminal domain ABUW_2197 PF00639 PPIC-type PPIASE domain ABUW_2198 PF00216 Bacterial DNA-binding protein ABUW_2201 PF02082 Transcriptional regulator ABUW_2202 PF00266 Aminotransferase class-V ABUW_2203 PF01592 NifU-like N terminal domain ABUW_2204 PF01521 Iron-sulphur cluster biosynthesis ABUW_2205 PF00226 DnaJ domain ABUW_2205 PF07743 HSCB C-terminal oligomerisation domain ABUW_2206 PF00012 Hsp70 protein ABUW_2207 PF00111 2Fe-2S iron-sulfur cluster binding domain ABUW_2208 PF00211 Adenylate and Guanylate cyclase catalytic domain ABUW_2210 PF17757 UvrB interaction domain ABUW_2210 PF03461 TRCF domain ABUW_2210 PF00271 Helicase conserved C-terminal domain ABUW_2210 PF02559 CarD-like/TRCF domain ABUW_2210 PF00270 DEAD/DEAH box helicase ABUW_2214 PF03737 Aldolase/RraA ABUW_2215 PF13460 NAD(P)H-binding ABUW_2216 PF01649 Ribosomal protein S20 ABUW_2218 PF00459 Inositol monophosphatase family ABUW_2221 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABUW_2221 PF00005 ABC transporter ABUW_2222 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2223 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2224 PF01432 Peptidase family M3 ABUW_2228 PF07715 TonB-dependent Receptor Plug Domain ABUW_2228 PF00593 TonB dependent receptor ABUW_2229 PF03544 Gram-negative bacterial TonB protein C-terminal ABUW_2230 PF01618 MotA/TolQ/ExbB proton channel family ABUW_2231 PF02472 Biopolymer transport protein ExbD/TolR ABUW_2232 PF02472 Biopolymer transport protein ExbD/TolR ABUW_2234 PF01274 Malate synthase ABUW_2235 PF03969 AFG1-like ATPase ABUW_2237 PF00743 Flavin-binding monooxygenase-like ABUW_2239 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABUW_2241 PF00216 Bacterial DNA-binding protein ABUW_2242 PF00575 S1 RNA binding domain ABUW_2243 PF02224 Cytidylate kinase ABUW_2245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABUW_2247 PF03167 Uracil DNA glycosylase superfamily ABUW_2249 PF03934 Type II secretion system (T2SS), protein K ABUW_2250 PF11612 Type II secretion system (T2SS), protein J ABUW_2250 PF07963 Prokaryotic N-terminal methylation motif ABUW_2251 PF02501 Type II secretion system (T2SS), protein I ABUW_2251 PF07963 Prokaryotic N-terminal methylation motif ABUW_2254 PF01026 TatD related DNase ABUW_2256 PF09115 DNA polymerase III, delta subunit, C terminal ABUW_2257 PF02348 Cytidylyltransferase ABUW_2258 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ABUW_2259 PF00005 ABC transporter ABUW_2259 PF00664 ABC transporter transmembrane region ABUW_2261 PF01618 MotA/TolQ/ExbB proton channel family ABUW_2262 PF17762 HTH domain found in ParB protein ABUW_2262 PF02195 ParB-like nuclease domain ABUW_2263 PF13614 AAA domain ABUW_2264 PF02527 rRNA small subunit methyltransferase G ABUW_2265 PF00483 Nucleotidyl transferase ABUW_2266 PF01636 Phosphotransferase enzyme family ABUW_2267 PF04453 LPS transport system D ABUW_2267 PF03968 OstA-like protein ABUW_2268 PF00639 PPIC-type PPIASE domain ABUW_2268 PF09312 SurA N-terminal domain ABUW_2269 PF01116 Fructose-bisphosphate aldolase class-II ABUW_2271 PF00162 Phosphoglycerate kinase ABUW_2273 PF02545 Maf-like protein ABUW_2274 PF08007 Cupin superfamily protein ABUW_2277 PF00375 Sodium:dicarboxylate symporter family ABUW_2278 PF06912 Protein of unknown function (DUF1275) ABUW_2279 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ABUW_2280 PF00664 ABC transporter transmembrane region ABUW_2280 PF00005 ABC transporter ABUW_2282 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABUW_2282 PF12833 Helix-turn-helix domain ABUW_2283 PF01597 Glycine cleavage H-protein ABUW_2284 PF02146 Sir2 family ABUW_2285 PF00474 Sodium:solute symporter family ABUW_2286 PF01037 Lrp/AsnC ligand binding domain ABUW_2287 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ABUW_2287 PF14850 DNA-binding domain of Proline dehydrogenase ABUW_2287 PF01619 Proline dehydrogenase ABUW_2287 PF00171 Aldehyde dehydrogenase family ABUW_2288 PF04229 GrpB protein ABUW_2289 PF05958 tRNA (Uracil-5-)-methyltransferase ABUW_2291 PF09992 Phosphodiester glycosidase ABUW_2293 PF04264 YceI-like domain ABUW_2295 PF02779 Transketolase, pyrimidine binding domain ABUW_2295 PF02780 Transketolase, C-terminal domain ABUW_2295 PF00456 Transketolase, thiamine diphosphate binding domain ABUW_2296 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABUW_2296 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABUW_2296 PF02772 S-adenosylmethionine synthetase, central domain ABUW_2300 PF00905 Penicillin binding protein transpeptidase domain ABUW_2304 PF02075 Crossover junction endodeoxyribonuclease RuvC ABUW_2305 PF01256 Carbohydrate kinase ABUW_2305 PF03853 YjeF-related protein N-terminus ABUW_2306 PF08331 Domain of unknown function (DUF1730) ABUW_2307 PF04055 Radical SAM superfamily ABUW_2307 PF06968 Biotin and Thiamin Synthesis associated domain ABUW_2310 PF16970 Type-1 fimbrial protein, A ABUW_2311 PF02753 Pili assembly chaperone PapD, C-terminal domain ABUW_2311 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABUW_2312 PF13953 PapC C-terminal domain ABUW_2312 PF00577 Outer membrane usher protein ABUW_2312 PF13954 PapC N-terminal domain ABUW_2316 PF00892 EamA-like transporter family ABUW_2318 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABUW_2320 PF03466 LysR substrate binding domain ABUW_2320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2325 PF00440 Bacterial regulatory proteins, tetR family ABUW_2327 PF01709 Transcriptional regulator ABUW_2328 PF01037 Lrp/AsnC ligand binding domain ABUW_2330 PF00005 ABC transporter ABUW_2331 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2332 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2335 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_2337 PF00296 Luciferase-like monooxygenase ABUW_2338 PF03180 NLPA lipoprotein ABUW_2339 PF03180 NLPA lipoprotein ABUW_2340 PF09383 NIL domain ABUW_2340 PF00005 ABC transporter ABUW_2341 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2342 PF06071 Protein of unknown function (DUF933) ABUW_2342 PF01926 50S ribosome-binding GTPase ABUW_2347 PF03591 AzlC protein ABUW_2348 PF05437 Branched-chain amino acid transport protein (AzlD) ABUW_2350 PF02222 ATP-grasp domain ABUW_2351 PF01909 Nucleotidyltransferase domain ABUW_2351 PF08335 GlnD PII-uridylyltransferase ABUW_2351 PF01966 HD domain ABUW_2352 PF00155 Aminotransferase class I and II ABUW_2354 PF12833 Helix-turn-helix domain ABUW_2354 PF12852 Cupin ABUW_2355 PF00255 Glutathione peroxidase ABUW_2356 PF01641 SelR domain ABUW_2357 PF00155 Aminotransferase class I and II ABUW_2358 PF00375 Sodium:dicarboxylate symporter family ABUW_2359 PF17763 Glutaminase/Asparaginase C-terminal domain ABUW_2359 PF00710 Asparaginase, N-terminal ABUW_2360 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABUW_2360 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABUW_2360 PF01336 OB-fold nucleic acid binding domain ABUW_2360 PF14579 Helix-hairpin-helix motif ABUW_2360 PF02811 PHP domain ABUW_2361 PF00588 SpoU rRNA Methylase family ABUW_2362 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_2365 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_2365 PF13192 Thioredoxin domain ABUW_2368 PF03466 LysR substrate binding domain ABUW_2368 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2369 PF01758 Sodium Bile acid symporter family ABUW_2370 PF01022 Bacterial regulatory protein, arsR family ABUW_2371 PF03960 ArsC family ABUW_2373 PF13382 Adenine deaminase C-terminal domain ABUW_2373 PF01979 Amidohydrolase family ABUW_2375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2375 PF03466 LysR substrate binding domain ABUW_2377 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABUW_2378 PF01177 Asp/Glu/Hydantoin racemase ABUW_2379 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ABUW_2380 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2381 PF00005 ABC transporter ABUW_2382 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABUW_2384 PF00083 Sugar (and other) transporter ABUW_2385 PF00296 Luciferase-like monooxygenase ABUW_2389 PF01654 Cytochrome bd terminal oxidase subunit I ABUW_2390 PF02322 Cytochrome bd terminal oxidase subunit II ABUW_2392 PF00155 Aminotransferase class I and II ABUW_2392 PF00392 Bacterial regulatory proteins, gntR family ABUW_2393 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2393 PF03466 LysR substrate binding domain ABUW_2396 PF00698 Acyl transferase domain ABUW_2397 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG ABUW_2399 PF01039 Carboxyl transferase domain ABUW_2400 PF06857 Malonate decarboxylase delta subunit (MdcD) ABUW_2401 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ABUW_2402 PF16957 Malonate decarboxylase, alpha subunit, transporter ABUW_2403 PF07690 Major Facilitator Superfamily ABUW_2406 PF00392 Bacterial regulatory proteins, gntR family ABUW_2407 PF04172 LrgB-like family ABUW_2408 PF03788 LrgA family ABUW_2409 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2409 PF03466 LysR substrate binding domain ABUW_2410 PF14834 Glutathione S-transferase, C-terminal domain ABUW_2410 PF02798 Glutathione S-transferase, N-terminal domain ABUW_2411 PF02798 Glutathione S-transferase, N-terminal domain ABUW_2412 PF03466 LysR substrate binding domain ABUW_2412 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2414 PF00581 Rhodanese-like domain ABUW_2415 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_2417 PF00266 Aminotransferase class-V ABUW_2418 PF01810 LysE type translocator ABUW_2419 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2419 PF03466 LysR substrate binding domain ABUW_2420 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABUW_2421 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABUW_2422 PF00005 ABC transporter ABUW_2423 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2424 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2426 PF00072 Response regulator receiver domain ABUW_2427 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_2427 PF00512 His Kinase A (phospho-acceptor) domain ABUW_2427 PF09308 LuxQ, periplasmic ABUW_2427 PF00072 Response regulator receiver domain ABUW_2429 PF13404 AsnC-type helix-turn-helix domain ABUW_2429 PF01037 Lrp/AsnC ligand binding domain ABUW_2431 PF00717 Peptidase S24-like ABUW_2436 PF00199 Catalase ABUW_2436 PF18011 C-terminal domain found in long catalases ABUW_2436 PF06628 Catalase-related immune-responsive ABUW_2438 PF02464 Competence-damaged protein ABUW_2438 PF18146 Damage-inducible protein CinA KH domain ABUW_2438 PF00994 Probable molybdopterin binding domain ABUW_2446 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2446 PF03466 LysR substrate binding domain ABUW_2450 PF13193 AMP-binding enzyme C-terminal domain ABUW_2450 PF00501 AMP-binding enzyme ABUW_2451 PF00440 Bacterial regulatory proteins, tetR family ABUW_2452 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_2452 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_2452 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2453 PF01039 Carboxyl transferase domain ABUW_2454 PF00378 Enoyl-CoA hydratase/isomerase ABUW_2455 PF00289 Biotin carboxylase, N-terminal domain ABUW_2455 PF00364 Biotin-requiring enzyme ABUW_2455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABUW_2455 PF02785 Biotin carboxylase C-terminal domain ABUW_2456 PF00682 HMGL-like ABUW_2457 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2457 PF03466 LysR substrate binding domain ABUW_2460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_2460 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABUW_2460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2460 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_2462 PF07690 Major Facilitator Superfamily ABUW_2464 PF01144 Coenzyme A transferase ABUW_2465 PF01144 Coenzyme A transferase ABUW_2466 PF07690 Major Facilitator Superfamily ABUW_2467 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2467 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_2467 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_2468 PF00378 Enoyl-CoA hydratase/isomerase ABUW_2470 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABUW_2470 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ABUW_2470 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABUW_2471 PF00108 Thiolase, N-terminal domain ABUW_2471 PF02803 Thiolase, C-terminal domain ABUW_2472 PF09339 IclR helix-turn-helix domain ABUW_2473 PF07690 Major Facilitator Superfamily ABUW_2474 PF03060 Nitronate monooxygenase ABUW_2475 PF00378 Enoyl-CoA hydratase/isomerase ABUW_2476 PF09339 IclR helix-turn-helix domain ABUW_2477 PF02515 CoA-transferase family III ABUW_2478 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2478 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_2478 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_2479 PF07690 Major Facilitator Superfamily ABUW_2480 PF13419 Haloacid dehalogenase-like hydrolase ABUW_2481 PF00266 Aminotransferase class-V ABUW_2482 PF01266 FAD dependent oxidoreductase ABUW_2483 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2484 PF00005 ABC transporter ABUW_2484 PF08402 TOBE domain ABUW_2486 PF00392 Bacterial regulatory proteins, gntR family ABUW_2486 PF07702 UTRA domain ABUW_2487 PF01494 FAD binding domain ABUW_2488 PF09339 IclR helix-turn-helix domain ABUW_2488 PF01614 Bacterial transcriptional regulator ABUW_2489 PF02525 Flavodoxin-like fold ABUW_2490 PF03466 LysR substrate binding domain ABUW_2490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2491 PF02627 Carboxymuconolactone decarboxylase family ABUW_2492 PF00171 Aldehyde dehydrogenase family ABUW_2494 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABUW_2496 PF00171 Aldehyde dehydrogenase family ABUW_2497 PF00296 Luciferase-like monooxygenase ABUW_2498 PF01613 Flavin reductase like domain ABUW_2499 PF12697 Alpha/beta hydrolase family ABUW_2503 PF01292 Prokaryotic cytochrome b561 ABUW_2504 PF00199 Catalase ABUW_2505 PF07690 Major Facilitator Superfamily ABUW_2506 PF00682 HMGL-like ABUW_2507 PF02515 CoA-transferase family III ABUW_2513 PF00313 'Cold-shock' DNA-binding domain ABUW_2521 PF13361 UvrD-like helicase C-terminal domain ABUW_2521 PF00580 UvrD/REP helicase N-terminal domain ABUW_2522 PF02463 RecF/RecN/SMC N terminal domain ABUW_2523 PF03061 Thioesterase superfamily ABUW_2524 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_2525 PF07848 PaaX-like protein ABUW_2525 PF08223 PaaX-like protein C-terminal domain ABUW_2526 PF00501 AMP-binding enzyme ABUW_2526 PF14535 AMP-binding enzyme C-terminal domain ABUW_2527 PF02803 Thiolase, C-terminal domain ABUW_2527 PF00108 Thiolase, N-terminal domain ABUW_2528 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABUW_2528 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABUW_2528 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ABUW_2529 PF00378 Enoyl-CoA hydratase/isomerase ABUW_2530 PF00378 Enoyl-CoA hydratase/isomerase ABUW_2531 PF00175 Oxidoreductase NAD-binding domain ABUW_2531 PF00970 Oxidoreductase FAD-binding domain ABUW_2531 PF00111 2Fe-2S iron-sulfur cluster binding domain ABUW_2532 PF01883 Iron-sulfur cluster assembly protein ABUW_2533 PF05138 Phenylacetic acid catabolic protein ABUW_2534 PF06243 Phenylacetic acid degradation B ABUW_2535 PF05138 Phenylacetic acid catabolic protein ABUW_2536 PF00171 Aldehyde dehydrogenase family ABUW_2536 PF01575 MaoC like domain ABUW_2537 PF03315 Serine dehydratase beta chain ABUW_2537 PF03313 Serine dehydratase alpha chain ABUW_2541 PF13520 Amino acid permease ABUW_2542 PF00171 Aldehyde dehydrogenase family ABUW_2543 PF00083 Sugar (and other) transporter ABUW_2545 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_2545 PF04324 BFD-like [2Fe-2S] binding domain ABUW_2547 PF01266 FAD dependent oxidoreductase ABUW_2548 PF05544 Proline racemase ABUW_2549 PF00392 Bacterial regulatory proteins, gntR family ABUW_2551 PF00701 Dihydrodipicolinate synthetase family ABUW_2555 PF09278 MerR, DNA binding ABUW_2555 PF00376 MerR family regulatory protein ABUW_2557 PF02677 Epoxyqueuosine reductase QueH ABUW_2560 PF07690 Major Facilitator Superfamily ABUW_2561 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABUW_2563 PF03466 LysR substrate binding domain ABUW_2563 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2569 PF10431 C-terminal, D2-small domain, of ClpB protein ABUW_2569 PF17871 AAA lid domain ABUW_2569 PF07724 AAA domain (Cdc48 subfamily) ABUW_2569 PF00004 ATPase family associated with various cellular activities (AAA) ABUW_2571 PF00691 OmpA family ABUW_2571 PF01389 OmpA-like transmembrane domain ABUW_2584 PF00005 ABC transporter ABUW_2585 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABUW_2586 PF01425 Amidase ABUW_2587 PF01402 Ribbon-helix-helix protein, copG family ABUW_2587 PF08753 NikR C terminal nickel binding domain ABUW_2589 PF01638 HxlR-like helix-turn-helix ABUW_2590 PF02525 Flavodoxin-like fold ABUW_2591 PF00289 Biotin carboxylase, N-terminal domain ABUW_2591 PF02785 Biotin carboxylase C-terminal domain ABUW_2591 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABUW_2594 PF08240 Alcohol dehydrogenase GroES-like domain ABUW_2594 PF00107 Zinc-binding dehydrogenase ABUW_2594 PF13823 Alcohol dehydrogenase GroES-associated ABUW_2596 PF00440 Bacterial regulatory proteins, tetR family ABUW_2602 PF00654 Voltage gated chloride channel ABUW_2603 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABUW_2603 PF02785 Biotin carboxylase C-terminal domain ABUW_2603 PF00289 Biotin carboxylase, N-terminal domain ABUW_2603 PF00364 Biotin-requiring enzyme ABUW_2605 PF07286 Protein of unknown function (DUF1445) ABUW_2606 PF03746 LamB/YcsF family ABUW_2607 PF01566 Natural resistance-associated macrophage protein ABUW_2609 PF03466 LysR substrate binding domain ABUW_2609 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2613 PF05593 RHS Repeat ABUW_2613 PF03527 RHS protein ABUW_2617 PF14220 Domain of unknown function (DUF4329) ABUW_2617 PF03527 RHS protein ABUW_2617 PF05593 RHS Repeat ABUW_2618 PF16671 Actin cross-linking domain ABUW_2618 PF04717 Type VI secretion system, phage-baseplate injector ABUW_2623 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABUW_2623 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABUW_2628 PF07690 Major Facilitator Superfamily ABUW_2630 PF03279 Bacterial lipid A biosynthesis acyltransferase ABUW_2632 PF00892 EamA-like transporter family ABUW_2633 PF01037 Lrp/AsnC ligand binding domain ABUW_2634 PF05190 MutS family domain IV ABUW_2634 PF05192 MutS domain III ABUW_2634 PF05188 MutS domain II ABUW_2634 PF01624 MutS domain I ABUW_2634 PF00488 MutS domain V ABUW_2636 PF00037 4Fe-4S binding domain ABUW_2636 PF11953 Domain of unknown function (DUF3470) ABUW_2638 PF01596 O-methyltransferase ABUW_2640 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_2641 PF01205 Uncharacterized protein family UPF0029 ABUW_2643 PF00664 ABC transporter transmembrane region ABUW_2643 PF00005 ABC transporter ABUW_2643 PF03412 Peptidase C39 family ABUW_2644 PF02321 Outer membrane efflux protein ABUW_2645 PF00005 ABC transporter ABUW_2645 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABUW_2646 PF03968 OstA-like protein ABUW_2649 PF00571 CBS domain ABUW_2649 PF01380 SIS domain ABUW_2650 PF09190 DALR domain ABUW_2650 PF01406 tRNA synthetases class I (C) catalytic domain ABUW_2653 PF00589 Phage integrase family ABUW_2660 PF13229 Right handed beta helix region ABUW_2660 PF12708 Pectate lyase superfamily protein ABUW_2664 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) ABUW_2668 PF06381 Protein of unknown function (DUF1073) ABUW_2682 PF01638 HxlR-like helix-turn-helix ABUW_2683 PF07690 Major Facilitator Superfamily ABUW_2688 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABUW_2688 PF03807 NADP oxidoreductase coenzyme F420-dependent ABUW_2690 PF00313 'Cold-shock' DNA-binding domain ABUW_2691 PF01810 LysE type translocator ABUW_2698 PF02601 Exonuclease VII, large subunit ABUW_2698 PF13742 OB-fold nucleic acid binding domain ABUW_2706 PF09278 MerR, DNA binding ABUW_2706 PF00376 MerR family regulatory protein ABUW_2707 PF00403 Heavy-metal-associated domain ABUW_2708 PF00403 Heavy-metal-associated domain ABUW_2709 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2709 PF03466 LysR substrate binding domain ABUW_2710 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABUW_2710 PF00355 Rieske [2Fe-2S] domain ABUW_2711 PF00866 Ring hydroxylating beta subunit ABUW_2712 PF00111 2Fe-2S iron-sulfur cluster binding domain ABUW_2712 PF00175 Oxidoreductase NAD-binding domain ABUW_2712 PF00970 Oxidoreductase FAD-binding domain ABUW_2713 PF00106 short chain dehydrogenase ABUW_2714 PF03594 Benzoate membrane transport protein ABUW_2715 PF07690 Major Facilitator Superfamily ABUW_2717 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABUW_2717 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABUW_2718 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ABUW_2718 PF00271 Helicase conserved C-terminal domain ABUW_2718 PF04408 Helicase associated domain (HA2) ABUW_2718 PF11898 Domain of unknown function (DUF3418) ABUW_2718 PF00270 DEAD/DEAH box helicase ABUW_2719 PF00578 AhpC/TSA family ABUW_2719 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABUW_2723 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_2723 PF13192 Thioredoxin domain ABUW_2725 PF02798 Glutathione S-transferase, N-terminal domain ABUW_2725 PF00043 Glutathione S-transferase, C-terminal domain ABUW_2727 PF02390 Putative methyltransferase ABUW_2728 PF00043 Glutathione S-transferase, C-terminal domain ABUW_2728 PF13417 Glutathione S-transferase, N-terminal domain ABUW_2730 PF13488 Glycine zipper ABUW_2730 PF00691 OmpA family ABUW_2731 PF01979 Amidohydrolase family ABUW_2732 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABUW_2732 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABUW_2734 PF10672 S-adenosylmethionine-dependent methyltransferase ABUW_2734 PF02926 THUMP domain ABUW_2734 PF01170 Putative RNA methylase family UPF0020 ABUW_2737 PF00004 ATPase family associated with various cellular activities (AAA) ABUW_2737 PF07724 AAA domain (Cdc48 subfamily) ABUW_2737 PF17871 AAA lid domain ABUW_2737 PF10431 C-terminal, D2-small domain, of ClpB protein ABUW_2737 PF02861 Clp amino terminal domain, pathogenicity island component ABUW_2740 PF02566 OsmC-like protein ABUW_2741 PF00027 Cyclic nucleotide-binding domain ABUW_2741 PF13545 Crp-like helix-turn-helix domain ABUW_2742 PF00248 Aldo/keto reductase family ABUW_2745 PF00709 Adenylosuccinate synthetase ABUW_2746 PF13393 Histidyl-tRNA synthetase ABUW_2747 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABUW_2747 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABUW_2748 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABUW_2748 PF01411 tRNA synthetases class II (A) ABUW_2748 PF02272 DHHA1 domain ABUW_2749 PF01842 ACT domain ABUW_2749 PF00696 Amino acid kinase family ABUW_2749 PF13840 ACT domain ABUW_2750 PF02599 Global regulator protein family ABUW_2751 PF01351 Ribonuclease HII ABUW_2753 PF01292 Prokaryotic cytochrome b561 ABUW_2754 PF00962 Adenosine/AMP deaminase ABUW_2755 PF00860 Permease family ABUW_2757 PF00743 Flavin-binding monooxygenase-like ABUW_2758 PF00106 short chain dehydrogenase ABUW_2760 PF17954 Quercetinase C-terminal cupin domain ABUW_2760 PF02678 Pirin ABUW_2761 PF00440 Bacterial regulatory proteins, tetR family ABUW_2761 PF17932 Tetracyclin repressor-like, C-terminal domain ABUW_2763 PF00106 short chain dehydrogenase ABUW_2764 PF00743 Flavin-binding monooxygenase-like ABUW_2765 PF04072 Leucine carboxyl methyltransferase ABUW_2766 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABUW_2766 PF12833 Helix-turn-helix domain ABUW_2767 PF00743 Flavin-binding monooxygenase-like ABUW_2768 PF00106 short chain dehydrogenase ABUW_2769 PF07859 alpha/beta hydrolase fold ABUW_2770 PF05199 GMC oxidoreductase ABUW_2771 PF03573 outer membrane porin, OprD family ABUW_2772 PF07690 Major Facilitator Superfamily ABUW_2773 PF00355 Rieske [2Fe-2S] domain ABUW_2774 PF00111 2Fe-2S iron-sulfur cluster binding domain ABUW_2774 PF00175 Oxidoreductase NAD-binding domain ABUW_2777 PF07690 Major Facilitator Superfamily ABUW_2778 PF00378 Enoyl-CoA hydratase/isomerase ABUW_2779 PF00171 Aldehyde dehydrogenase family ABUW_2781 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_2781 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2781 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_2782 PF03573 outer membrane porin, OprD family ABUW_2785 PF07519 Tannase and feruloyl esterase ABUW_2786 PF07729 FCD domain ABUW_2786 PF00392 Bacterial regulatory proteins, gntR family ABUW_2787 PF00171 Aldehyde dehydrogenase family ABUW_2788 PF00701 Dihydrodipicolinate synthetase family ABUW_2789 PF13378 Enolase C-terminal domain-like ABUW_2790 PF07690 Major Facilitator Superfamily ABUW_2791 PF08666 SAF domain ABUW_2791 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ABUW_2792 PF00892 EamA-like transporter family ABUW_2793 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABUW_2793 PF12833 Helix-turn-helix domain ABUW_2794 PF00171 Aldehyde dehydrogenase family ABUW_2798 PF00324 Amino acid permease ABUW_2799 PF04958 Arginine N-succinyltransferase beta subunit ABUW_2800 PF00202 Aminotransferase class-III ABUW_2802 PF00171 Aldehyde dehydrogenase family ABUW_2804 PF00392 Bacterial regulatory proteins, gntR family ABUW_2804 PF07729 FCD domain ABUW_2806 PF00324 Amino acid permease ABUW_2807 PF01266 FAD dependent oxidoreductase ABUW_2808 PF00324 Amino acid permease ABUW_2816 PF05593 RHS Repeat ABUW_2816 PF03527 RHS protein ABUW_2817 PF04717 Type VI secretion system, phage-baseplate injector ABUW_2817 PF16671 Actin cross-linking domain ABUW_2820 PF03180 NLPA lipoprotein ABUW_2822 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_2822 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABUW_2823 PF00764 Arginosuccinate synthase ABUW_2824 PF00563 EAL domain ABUW_2824 PF01590 GAF domain ABUW_2824 PF00990 Diguanylate cyclase, GGDEF domain ABUW_2824 PF00360 Phytochrome region ABUW_2825 PF01979 Amidohydrolase family ABUW_2826 PF00929 Exonuclease ABUW_2828 PF00593 TonB dependent receptor ABUW_2828 PF07715 TonB-dependent Receptor Plug Domain ABUW_2835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABUW_2835 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_2836 PF00005 ABC transporter ABUW_2836 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABUW_2837 PF12911 N-terminal TM domain of oligopeptide transport permease C ABUW_2837 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2838 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2839 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABUW_2840 PF01464 Transglycosylase SLT domain ABUW_2840 PF01476 LysM domain ABUW_2840 PF01464 Transglycosylase SLT domain ABUW_2840 PF01476 LysM domain ABUW_2841 PF00929 Exonuclease ABUW_2843 PF09297 NADH pyrophosphatase zinc ribbon domain ABUW_2843 PF00293 NUDIX domain ABUW_2845 PF04972 BON domain ABUW_2846 PF02021 Uncharacterised protein family UPF0102 ABUW_2847 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABUW_2849 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2849 PF03466 LysR substrate binding domain ABUW_2850 PF01810 LysE type translocator ABUW_2852 PF13411 MerR HTH family regulatory protein ABUW_2854 PF01494 FAD binding domain ABUW_2855 PF01494 FAD binding domain ABUW_2856 PF00557 Metallopeptidase family M24 ABUW_2856 PF05195 Aminopeptidase P, N-terminal domain ABUW_2863 PF01812 5-formyltetrahydrofolate cyclo-ligase family ABUW_2865 PF00004 ATPase family associated with various cellular activities (AAA) ABUW_2865 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABUW_2865 PF05362 Lon protease (S16) C-terminal proteolytic domain ABUW_2866 PF02590 Predicted SPOUT methyltransferase ABUW_2867 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ABUW_2869 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABUW_2869 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABUW_2870 PF04060 Putative Fe-S cluster ABUW_2871 PF00633 Helix-hairpin-helix motif ABUW_2871 PF00730 HhH-GPD superfamily base excision DNA repair protein ABUW_2871 PF10576 Iron-sulfur binding domain of endonuclease III ABUW_2873 PF05191 Adenylate kinase, active site lid ABUW_2876 PF00905 Penicillin binding protein transpeptidase domain ABUW_2876 PF03717 Penicillin-binding Protein dimerisation domain ABUW_2879 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABUW_2880 PF01730 UreF ABUW_2881 PF02814 UreE urease accessory protein, N-terminal domain ABUW_2881 PF05194 UreE urease accessory protein, C-terminal domain ABUW_2882 PF00449 Urease alpha-subunit, N-terminal domain ABUW_2882 PF01979 Amidohydrolase family ABUW_2883 PF00699 Urease beta subunit ABUW_2884 PF00547 Urease, gamma subunit ABUW_2885 PF01774 UreD urease accessory protein ABUW_2888 PF00463 Isocitrate lyase family ABUW_2889 PF03466 LysR substrate binding domain ABUW_2889 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2890 PF00571 CBS domain ABUW_2890 PF03471 Transporter associated domain ABUW_2890 PF01595 Cyclin M transmembrane N-terminal domain ABUW_2892 PF03600 Citrate transporter ABUW_2895 PF00009 Elongation factor Tu GTP binding domain ABUW_2896 PF01507 Phosphoadenosine phosphosulfate reductase family ABUW_2898 PF14052 Capsule assembly protein Wzi ABUW_2899 PF00152 tRNA synthetases class II (D, K and N) ABUW_2899 PF01336 OB-fold nucleic acid binding domain ABUW_2902 PF00301 Rubredoxin ABUW_2903 PF18113 Rubredoxin binding C-terminal domain ABUW_2903 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_2904 PF00561 alpha/beta hydrolase fold ABUW_2905 PF03466 LysR substrate binding domain ABUW_2905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2907 PF02503 Polyphosphate kinase middle domain ABUW_2907 PF17941 Polyphosphate kinase C-terminal domain 1 ABUW_2907 PF13090 Polyphosphate kinase C-terminal domain 2 ABUW_2907 PF13089 Polyphosphate kinase N-terminal domain ABUW_2908 PF00912 Transglycosylase ABUW_2909 PF01694 Rhomboid family ABUW_2911 PF00005 ABC transporter ABUW_2912 PF13472 GDSL-like Lipase/Acylhydrolase family ABUW_2913 PF00484 Carbonic anhydrase ABUW_2914 PF00561 alpha/beta hydrolase fold ABUW_2916 PF00593 TonB dependent receptor ABUW_2916 PF07715 TonB-dependent Receptor Plug Domain ABUW_2917 PF01521 Iron-sulphur cluster biosynthesis ABUW_2917 PF01106 NifU-like domain ABUW_2920 PF00884 Sulfatase ABUW_2921 PF03781 Sulfatase-modifying factor enzyme 1 ABUW_2924 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_2925 PF01384 Phosphate transporter family ABUW_2926 PF02607 B12 binding domain ABUW_2926 PF02965 Vitamin B12 dependent methionine synthase, activation domain ABUW_2926 PF00809 Pterin binding enzyme ABUW_2926 PF02310 B12 binding domain ABUW_2926 PF02574 Homocysteine S-methyltransferase ABUW_2927 PF02779 Transketolase, pyrimidine binding domain ABUW_2927 PF02780 Transketolase, C-terminal domain ABUW_2928 PF00456 Transketolase, thiamine diphosphate binding domain ABUW_2929 PF07690 Major Facilitator Superfamily ABUW_2931 PF03466 LysR substrate binding domain ABUW_2931 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2933 PF01263 Aldose 1-epimerase ABUW_2934 PF07690 Major Facilitator Superfamily ABUW_2935 PF12833 Helix-turn-helix domain ABUW_2935 PF02311 AraC-like ligand binding domain ABUW_2936 PF04960 Glutaminase ABUW_2937 PF01327 Polypeptide deformylase ABUW_2939 PF07690 Major Facilitator Superfamily ABUW_2941 PF00205 Thiamine pyrophosphate enzyme, central domain ABUW_2941 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABUW_2941 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABUW_2942 PF00171 Aldehyde dehydrogenase family ABUW_2943 PF03447 Homoserine dehydrogenase, NAD binding domain ABUW_2943 PF01958 Domain of unknown function DUF108 ABUW_2945 PF12697 Alpha/beta hydrolase family ABUW_2947 PF07690 Major Facilitator Superfamily ABUW_2948 PF14759 Reductase C-terminal ABUW_2948 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_2949 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABUW_2951 PF00355 Rieske [2Fe-2S] domain ABUW_2953 PF00355 Rieske [2Fe-2S] domain ABUW_2954 PF01614 Bacterial transcriptional regulator ABUW_2954 PF09339 IclR helix-turn-helix domain ABUW_2957 PF00378 Enoyl-CoA hydratase/isomerase ABUW_2959 PF00535 Glycosyl transferase family 2 ABUW_2960 PF14883 Hypothetical glycosyl hydrolase family 13 ABUW_2960 PF01522 Polysaccharide deacetylase ABUW_2961 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABUW_2962 PF07152 YaeQ protein ABUW_2963 PF00375 Sodium:dicarboxylate symporter family ABUW_2964 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABUW_2964 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABUW_2966 PF03061 Thioesterase superfamily ABUW_2968 PF02028 BCCT, betaine/carnitine/choline family transporter ABUW_2969 PF02028 BCCT, betaine/carnitine/choline family transporter ABUW_2970 PF00440 Bacterial regulatory proteins, tetR family ABUW_2970 PF13977 BetI-type transcriptional repressor, C-terminal ABUW_2971 PF00171 Aldehyde dehydrogenase family ABUW_2972 PF00732 GMC oxidoreductase ABUW_2972 PF05199 GMC oxidoreductase ABUW_2973 PF06039 Malate:quinone oxidoreductase (Mqo) ABUW_2975 PF02574 Homocysteine S-methyltransferase ABUW_2976 PF13520 Amino acid permease ABUW_2981 PF01126 Heme oxygenase ABUW_2985 PF07715 TonB-dependent Receptor Plug Domain ABUW_2985 PF00593 TonB dependent receptor ABUW_2987 PF04542 Sigma-70 region 2 ABUW_2987 PF08281 Sigma-70, region 4 ABUW_2989 PF00701 Dihydrodipicolinate synthetase family ABUW_2990 PF00083 Sugar (and other) transporter ABUW_2997 PF04851 Type III restriction enzyme, res subunit ABUW_2997 PF08774 VRR-NUC domain ABUW_2998 PF18273 Type III R-M EcoP15I C-terminal domain ABUW_2998 PF01555 DNA methylase ABUW_3005 PF02661 Fic/DOC family ABUW_3005 PF13784 Fic/DOC family N-terminal ABUW_3007 PF00436 Single-strand binding protein family ABUW_3017 PF13356 Arm DNA-binding domain ABUW_3017 PF00589 Phage integrase family ABUW_3019 PF07690 Major Facilitator Superfamily ABUW_3020 PF13533 Biotin-lipoyl like ABUW_3021 PF03061 Thioesterase superfamily ABUW_3022 PF00490 Delta-aminolevulinic acid dehydratase ABUW_3023 PF01266 FAD dependent oxidoreductase ABUW_3024 PF08338 Domain of unknown function (DUF1731) ABUW_3024 PF01370 NAD dependent epimerase/dehydratase family ABUW_3028 PF00149 Calcineurin-like phosphoesterase ABUW_3028 PF12320 Type 5 capsule protein repressor C-terminal domain ABUW_3030 PF01168 Alanine racemase, N-terminal domain ABUW_3031 PF00437 Type II/IV secretion system protein ABUW_3032 PF00437 Type II/IV secretion system protein ABUW_3033 PF01475 Ferric uptake regulator family ABUW_3034 PF04355 SmpA / OmlA family ABUW_3035 PF03658 RnfH family Ubiquitin ABUW_3037 PF01814 Hemerythrin HHE cation binding domain ABUW_3038 PF13230 Glutamine amidotransferases class-II ABUW_3040 PF00696 Amino acid kinase family ABUW_3041 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABUW_3041 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABUW_3041 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABUW_3041 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABUW_3042 PF00692 dUTPase ABUW_3043 PF13361 UvrD-like helicase C-terminal domain ABUW_3043 PF00580 UvrD/REP helicase N-terminal domain ABUW_3045 PF00691 OmpA family ABUW_3045 PF13488 Glycine zipper ABUW_3046 PF01553 Acyltransferase ABUW_3048 PF03775 Septum formation inhibitor MinC, C-terminal domain ABUW_3049 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABUW_3050 PF03776 Septum formation topological specificity factor MinE ABUW_3052 PF01810 LysE type translocator ABUW_3053 PF17854 FtsK alpha domain ABUW_3053 PF01580 FtsK/SpoIIIE family ABUW_3053 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ABUW_3053 PF09397 Ftsk gamma domain ABUW_3054 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_3055 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ABUW_3056 PF04377 Arginine-tRNA-protein transferase, C terminus ABUW_3056 PF04376 Arginine-tRNA-protein transferase, N terminus ABUW_3057 PF00583 Acetyltransferase (GNAT) family ABUW_3060 PF03143 Elongation factor Tu C-terminal domain ABUW_3060 PF03144 Elongation factor Tu domain 2 ABUW_3060 PF00009 Elongation factor Tu GTP binding domain ABUW_3061 PF00009 Elongation factor Tu GTP binding domain ABUW_3061 PF14492 Elongation Factor G, domain II ABUW_3061 PF03764 Elongation factor G, domain IV ABUW_3061 PF00679 Elongation factor G C-terminus ABUW_3061 PF03144 Elongation factor Tu domain 2 ABUW_3062 PF00177 Ribosomal protein S7p/S5e ABUW_3063 PF00164 Ribosomal protein S12/S23 ABUW_3065 PF00109 Beta-ketoacyl synthase, N-terminal domain ABUW_3065 PF02801 Beta-ketoacyl synthase, C-terminal domain ABUW_3067 PF05726 Pirin C-terminal cupin domain ABUW_3067 PF02678 Pirin ABUW_3069 PF02540 NAD synthase ABUW_3069 PF00795 Carbon-nitrogen hydrolase ABUW_3072 PF00175 Oxidoreductase NAD-binding domain ABUW_3072 PF00111 2Fe-2S iron-sulfur cluster binding domain ABUW_3072 PF00970 Oxidoreductase FAD-binding domain ABUW_3073 PF00171 Aldehyde dehydrogenase family ABUW_3074 PF00355 Rieske [2Fe-2S] domain ABUW_3074 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABUW_3075 PF07859 alpha/beta hydrolase fold ABUW_3076 PF02028 BCCT, betaine/carnitine/choline family transporter ABUW_3077 PF00180 Isocitrate/isopropylmalate dehydrogenase ABUW_3078 PF03466 LysR substrate binding domain ABUW_3078 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3081 PF00037 4Fe-4S binding domain ABUW_3082 PF01467 Cytidylyltransferase-like ABUW_3083 PF01668 SmpB protein ABUW_3084 PF03358 NADPH-dependent FMN reductase ABUW_3086 PF01479 S4 domain ABUW_3086 PF00849 RNA pseudouridylate synthase ABUW_3087 PF13525 Outer membrane lipoprotein ABUW_3088 PF01807 CHC2 zinc finger ABUW_3088 PF10410 DnaB-helicase binding domain of primase ABUW_3088 PF08278 DNA primase DnaG DnaB-binding ABUW_3088 PF08275 DNA primase catalytic core, N-terminal domain ABUW_3089 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABUW_3089 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABUW_3089 PF01488 Shikimate / quinate 5-dehydrogenase ABUW_3091 PF03550 Outer membrane lipoprotein LolB ABUW_3092 PF00288 GHMP kinases N terminal domain ABUW_3092 PF08544 GHMP kinases C terminal ABUW_3097 PF14572 Phosphoribosyl synthetase-associated domain ABUW_3097 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABUW_3098 PF01386 Ribosomal L25p family ABUW_3099 PF01195 Peptidyl-tRNA hydrolase ABUW_3100 PF02261 Aspartate decarboxylase ABUW_3103 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABUW_3105 PF08543 Phosphomethylpyrimidine kinase ABUW_3105 PF03070 TENA/THI-4/PQQC family ABUW_3105 PF02581 Thiamine monophosphate synthase ABUW_3106 PF04972 BON domain ABUW_3106 PF01476 LysM domain ABUW_3107 PF00550 Phosphopantetheine attachment site ABUW_3109 PF00698 Acyl transferase domain ABUW_3110 PF01783 Ribosomal L32p protein family ABUW_3111 PF02620 Large ribosomal RNA subunit accumulation protein YceD ABUW_3112 PF04315 Elongation factor P hydroxylase ABUW_3113 PF01300 Telomere recombination ABUW_3114 PF02616 Segregation and condensation protein ScpA ABUW_3115 PF04079 Segregation and condensation complex subunit ScpB ABUW_3116 PF01479 S4 domain ABUW_3116 PF00849 RNA pseudouridylate synthase ABUW_3119 PF00155 Aminotransferase class I and II ABUW_3120 PF04055 Radical SAM superfamily ABUW_3120 PF00202 Aminotransferase class-III ABUW_3120 PF06968 Biotin and Thiamin Synthesis associated domain ABUW_3121 PF08241 Methyltransferase domain ABUW_3121 PF12697 Alpha/beta hydrolase family ABUW_3122 PF02358 Trehalose-phosphatase ABUW_3123 PF00982 Glycosyltransferase family 20 ABUW_3124 PF07690 Major Facilitator Superfamily ABUW_3125 PF00210 Ferritin-like domain ABUW_3127 PF00533 BRCA1 C Terminus (BRCT) domain ABUW_3127 PF12826 Helix-hairpin-helix motif ABUW_3127 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ABUW_3127 PF03120 NAD-dependent DNA ligase OB-fold domain ABUW_3127 PF01653 NAD-dependent DNA ligase adenylation domain ABUW_3129 PF06470 SMC proteins Flexible Hinge Domain ABUW_3129 PF02463 RecF/RecN/SMC N terminal domain ABUW_3131 PF01925 Sulfite exporter TauE/SafE ABUW_3133 PF03309 Type III pantothenate kinase ABUW_3134 PF02978 Signal peptide binding domain ABUW_3134 PF02881 SRP54-type protein, helical bundle domain ABUW_3134 PF00448 SRP54-type protein, GTPase domain ABUW_3136 PF01207 Dihydrouridine synthase (Dus) ABUW_3142 PF00692 dUTPase ABUW_3145 PF01048 Phosphorylase superfamily ABUW_3146 PF10609 NUBPL iron-transfer P-loop NTPase ABUW_3148 PF09334 tRNA synthetases class I (M) ABUW_3148 PF01588 Putative tRNA binding domain ABUW_3153 PF13533 Biotin-lipoyl like ABUW_3154 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_3157 PF05552 Conserved TM helix ABUW_3160 PF00970 Oxidoreductase FAD-binding domain ABUW_3160 PF00175 Oxidoreductase NAD-binding domain ABUW_3161 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3161 PF03466 LysR substrate binding domain ABUW_3163 PF00313 'Cold-shock' DNA-binding domain ABUW_3165 PF00361 Proton-conducting membrane transporter ABUW_3166 PF00361 Proton-conducting membrane transporter ABUW_3167 PF00361 Proton-conducting membrane transporter ABUW_3167 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABUW_3168 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABUW_3169 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ABUW_3170 PF12838 4Fe-4S dicluster domain ABUW_3171 PF00146 NADH dehydrogenase ABUW_3172 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABUW_3172 PF00384 Molybdopterin oxidoreductase ABUW_3172 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABUW_3173 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABUW_3173 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABUW_3173 PF10531 SLBB domain ABUW_3175 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ABUW_3175 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABUW_3176 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABUW_3177 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABUW_3178 PF17151 Periplasmic sensor domain ABUW_3178 PF00990 Diguanylate cyclase, GGDEF domain ABUW_3180 PF00672 HAMP domain ABUW_3180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_3180 PF00512 His Kinase A (phospho-acceptor) domain ABUW_3181 PF00486 Transcriptional regulatory protein, C terminal ABUW_3181 PF00072 Response regulator receiver domain ABUW_3183 PF03477 ATP cone domain ABUW_3183 PF02867 Ribonucleotide reductase, barrel domain ABUW_3183 PF00317 Ribonucleotide reductase, all-alpha domain ABUW_3185 PF00268 Ribonucleotide reductase, small chain ABUW_3188 PF02567 Phenazine biosynthesis-like protein ABUW_3194 PF00440 Bacterial regulatory proteins, tetR family ABUW_3194 PF16295 Tetracyclin repressor-like, C-terminal domain ABUW_3196 PF01613 Flavin reductase like domain ABUW_3197 PF01717 Cobalamin-independent synthase, Catalytic domain ABUW_3197 PF08267 Cobalamin-independent synthase, N-terminal domain ABUW_3199 PF03466 LysR substrate binding domain ABUW_3199 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3201 PF01810 LysE type translocator ABUW_3203 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABUW_3203 PF12833 Helix-turn-helix domain ABUW_3204 PF07687 Peptidase dimerisation domain ABUW_3204 PF01546 Peptidase family M20/M25/M40 ABUW_3206 PF03466 LysR substrate binding domain ABUW_3206 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3207 PF07690 Major Facilitator Superfamily ABUW_3209 PF03466 LysR substrate binding domain ABUW_3209 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3210 PF14537 Cytochrome c3 ABUW_3210 PF00890 FAD binding domain ABUW_3212 PF02515 CoA-transferase family III ABUW_3213 PF07690 Major Facilitator Superfamily ABUW_3214 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_3214 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_3214 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_3215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3215 PF03466 LysR substrate binding domain ABUW_3216 PF08240 Alcohol dehydrogenase GroES-like domain ABUW_3216 PF00107 Zinc-binding dehydrogenase ABUW_3217 PF00962 Adenosine/AMP deaminase ABUW_3222 PF02445 Quinolinate synthetase A protein ABUW_3223 PF01960 ArgJ family ABUW_3224 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABUW_3224 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABUW_3225 PF00893 Small Multidrug Resistance protein ABUW_3227 PF05275 Copper resistance protein B precursor (CopB) ABUW_3228 PF07731 Multicopper oxidase ABUW_3228 PF00394 Multicopper oxidase ABUW_3228 PF07732 Multicopper oxidase ABUW_3231 PF00834 Ribulose-phosphate 3 epimerase family ABUW_3233 PF00756 Putative esterase ABUW_3235 PF04445 Putative SAM-dependent methyltransferase ABUW_3236 PF00814 Glycoprotease family ABUW_3237 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_3238 PF00293 NUDIX domain ABUW_3246 PF00425 chorismate binding enzyme ABUW_3246 PF04715 Anthranilate synthase component I, N terminal region ABUW_3247 PF00155 Aminotransferase class I and II ABUW_3248 PF00815 Histidinol dehydrogenase ABUW_3249 PF01634 ATP phosphoribosyltransferase ABUW_3250 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABUW_3251 PF01722 BolA-like protein ABUW_3252 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABUW_3253 PF04552 Sigma-54, DNA binding domain ABUW_3253 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABUW_3253 PF04963 Sigma-54 factor, core binding domain ABUW_3262 PF00795 Carbon-nitrogen hydrolase ABUW_3264 PF01047 MarR family ABUW_3265 PF02566 OsmC-like protein ABUW_3266 PF00437 Type II/IV secretion system protein ABUW_3270 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABUW_3270 PF00476 DNA polymerase family A ABUW_3270 PF01612 3'-5' exonuclease ABUW_3270 PF01367 5'-3' exonuclease, C-terminal SAM fold ABUW_3271 PF02325 YGGT family ABUW_3272 PF03807 NADP oxidoreductase coenzyme F420-dependent ABUW_3272 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABUW_3273 PF11734 TilS substrate C-terminal domain ABUW_3273 PF01171 PP-loop family ABUW_3273 PF09179 TilS substrate binding domain ABUW_3274 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABUW_3275 PF02541 Ppx/GppA phosphatase family ABUW_3276 PF00085 Thioredoxin ABUW_3277 PF07498 Rho termination factor, N-terminal domain ABUW_3277 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABUW_3277 PF07497 Rho termination factor, RNA-binding domain ABUW_3279 PF00216 Bacterial DNA-binding protein ABUW_3280 PF01588 Putative tRNA binding domain ABUW_3280 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABUW_3280 PF03147 Ferredoxin-fold anticodon binding domain ABUW_3280 PF03484 tRNA synthetase B5 domain ABUW_3280 PF03483 B3/4 domain ABUW_3281 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABUW_3281 PF01409 tRNA synthetases class II core domain (F) ABUW_3284 PF00453 Ribosomal protein L20 ABUW_3285 PF01632 Ribosomal protein L35 ABUW_3286 PF07690 Major Facilitator Superfamily ABUW_3287 PF09335 SNARE associated Golgi protein ABUW_3288 PF02798 Glutathione S-transferase, N-terminal domain ABUW_3288 PF00043 Glutathione S-transferase, C-terminal domain ABUW_3289 PF05198 Translation initiation factor IF-3, N-terminal domain ABUW_3289 PF00707 Translation initiation factor IF-3, C-terminal domain ABUW_3290 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABUW_3290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABUW_3290 PF02824 TGS domain ABUW_3290 PF03129 Anticodon binding domain ABUW_3291 PF00501 AMP-binding enzyme ABUW_3291 PF13193 AMP-binding enzyme C-terminal domain ABUW_3292 PF04751 Protein of unknown function (DUF615) ABUW_3293 PF00381 PTS HPr component phosphorylation site ABUW_3294 PF03668 P-loop ATPase protein family ABUW_3295 PF02569 Pantoate-beta-alanine ligase ABUW_3296 PF02548 Ketopantoate hydroxymethyltransferase ABUW_3297 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABUW_3298 PF12627 Probable RNA and SrmB- binding site of polymerase A ABUW_3298 PF12626 Polymerase A arginine-rich C-terminus ABUW_3298 PF01743 Poly A polymerase head domain ABUW_3300 PF03819 MazG nucleotide pyrophosphohydrolase domain ABUW_3302 PF13291 ACT domain ABUW_3302 PF02824 TGS domain ABUW_3302 PF04607 Region found in RelA / SpoT proteins ABUW_3303 PF05958 tRNA (Uracil-5-)-methyltransferase ABUW_3305 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_3306 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABUW_3306 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_3306 PF00072 Response regulator receiver domain ABUW_3306 PF00672 HAMP domain ABUW_3306 PF00512 His Kinase A (phospho-acceptor) domain ABUW_3306 PF01627 Hpt domain ABUW_3307 PF00378 Enoyl-CoA hydratase/isomerase ABUW_3308 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABUW_3308 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABUW_3309 PF01261 Xylose isomerase-like TIM barrel ABUW_3311 PF00106 short chain dehydrogenase ABUW_3312 PF02233 NAD(P) transhydrogenase beta subunit ABUW_3313 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ABUW_3314 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABUW_3314 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ABUW_3315 PF00892 EamA-like transporter family ABUW_3317 PF07690 Major Facilitator Superfamily ABUW_3321 PF00394 Multicopper oxidase ABUW_3321 PF07731 Multicopper oxidase ABUW_3321 PF07732 Multicopper oxidase ABUW_3323 PF00486 Transcriptional regulatory protein, C terminal ABUW_3323 PF00072 Response regulator receiver domain ABUW_3324 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_3324 PF00512 His Kinase A (phospho-acceptor) domain ABUW_3324 PF00672 HAMP domain ABUW_3325 PF04945 YHS domain ABUW_3341 PF00589 Phage integrase family ABUW_3342 PF01207 Dihydrouridine synthase (Dus) ABUW_3344 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3344 PF03466 LysR substrate binding domain ABUW_3345 PF00899 ThiF family ABUW_3346 PF00694 Aconitase C-terminal domain ABUW_3346 PF00330 Aconitase family (aconitate hydratase) ABUW_3347 PF01026 TatD related DNase ABUW_3350 PF03144 Elongation factor Tu domain 2 ABUW_3350 PF00009 Elongation factor Tu GTP binding domain ABUW_3350 PF16658 Class II release factor RF3, C-terminal domain ABUW_3354 PF03707 Bacterial signalling protein N terminal repeat ABUW_3354 PF00990 Diguanylate cyclase, GGDEF domain ABUW_3354 PF00563 EAL domain ABUW_3355 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABUW_3355 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABUW_3356 PF10369 Small subunit of acetolactate synthase ABUW_3357 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABUW_3357 PF00205 Thiamine pyrophosphate enzyme, central domain ABUW_3357 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABUW_3359 PF08264 Anticodon-binding domain of tRNA ABUW_3359 PF00133 tRNA synthetases class I (I, L, M and V) ABUW_3359 PF13603 Leucyl-tRNA synthetase, Domain 2 ABUW_3359 PF09334 tRNA synthetases class I (M) ABUW_3362 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABUW_3363 PF12704 MacB-like periplasmic core domain ABUW_3363 PF02687 FtsX-like permease family ABUW_3363 PF00005 ABC transporter ABUW_3364 PF02321 Outer membrane efflux protein ABUW_3367 PF00929 Exonuclease ABUW_3368 PF03193 RsgA GTPase ABUW_3370 PF00462 Glutaredoxin ABUW_3371 PF02556 Preprotein translocase subunit SecB ABUW_3373 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABUW_3373 PF01926 50S ribosome-binding GTPase ABUW_3374 PF13360 PQQ-like domain ABUW_3376 PF13393 Histidyl-tRNA synthetase ABUW_3376 PF03129 Anticodon binding domain ABUW_3377 PF04551 GcpE protein ABUW_3378 PF13464 Domain of unknown function (DUF4115) ABUW_3380 PF04055 Radical SAM superfamily ABUW_3381 PF00334 Nucleoside diphosphate kinase ABUW_3382 PF04384 Iron-sulphur cluster assembly ABUW_3383 PF01569 PAP2 superfamily ABUW_3384 PF00534 Glycosyl transferases group 1 ABUW_3384 PF13439 Glycosyltransferase Family 4 ABUW_3385 PF03572 Peptidase family S41 ABUW_3385 PF00595 PDZ domain ABUW_3385 PF11818 C-terminal domain of tail specific protease (DUF3340) ABUW_3385 PF17804 Tail specific protease N-terminal domain ABUW_3386 PF00933 Glycosyl hydrolase family 3 N terminal domain ABUW_3388 PF00561 alpha/beta hydrolase fold ABUW_3389 PF00171 Aldehyde dehydrogenase family ABUW_3390 PF00171 Aldehyde dehydrogenase family ABUW_3391 PF01202 Shikimate kinase ABUW_3392 PF02447 GntP family permease ABUW_3393 PF01081 KDPG and KHG aldolase ABUW_3394 PF00920 Dehydratase family ABUW_3395 PF00871 Acetokinase family ABUW_3396 PF01515 Phosphate acetyl/butaryl transferase ABUW_3396 PF07085 DRTGG domain ABUW_3397 PF05683 Fumarase C-terminus ABUW_3397 PF05681 Fumarate hydratase (Fumerase) ABUW_3400 PF10431 C-terminal, D2-small domain, of ClpB protein ABUW_3400 PF07724 AAA domain (Cdc48 subfamily) ABUW_3400 PF06689 ClpX C4-type zinc finger ABUW_3401 PF00574 Clp protease ABUW_3402 PF05698 Bacterial trigger factor protein (TF) C-terminus ABUW_3402 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABUW_3402 PF05697 Bacterial trigger factor protein (TF) ABUW_3403 PF00593 TonB dependent receptor ABUW_3403 PF07715 TonB-dependent Receptor Plug Domain ABUW_3404 PF18331 PKHD-type hydroxylase C-terminal domain ABUW_3404 PF13640 2OG-Fe(II) oxygenase superfamily ABUW_3405 PF00682 HMGL-like ABUW_3405 PF08502 LeuA allosteric (dimerisation) domain ABUW_3406 PF00561 alpha/beta hydrolase fold ABUW_3407 PF07021 Methionine biosynthesis protein MetW ABUW_3407 PF00561 alpha/beta hydrolase fold ABUW_3409 PF01725 Ham1 family ABUW_3411 PF02416 mttA/Hcf106 family ABUW_3412 PF02416 mttA/Hcf106 family ABUW_3413 PF00902 Sec-independent protein translocase protein (TatC) ABUW_3417 PF01790 Prolipoprotein diacylglyceryl transferase ABUW_3420 PF00303 Thymidylate synthase ABUW_3421 PF00186 Dihydrofolate reductase ABUW_3423 PF01625 Peptide methionine sulfoxide reductase ABUW_3425 PF01618 MotA/TolQ/ExbB proton channel family ABUW_3427 PF00551 Formyl transferase ABUW_3427 PF01842 ACT domain ABUW_3429 PF00171 Aldehyde dehydrogenase family ABUW_3430 PF00830 Ribosomal L28 family ABUW_3431 PF00471 Ribosomal protein L33 ABUW_3432 PF00999 Sodium/hydrogen exchanger family ABUW_3432 PF02254 TrkA-N domain ABUW_3436 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ABUW_3437 PF00580 UvrD/REP helicase N-terminal domain ABUW_3437 PF13361 UvrD-like helicase C-terminal domain ABUW_3440 PF01131 DNA topoisomerase ABUW_3440 PF08272 Topoisomerase I zinc-ribbon-like ABUW_3440 PF01396 Topoisomerase DNA binding C4 zinc finger ABUW_3440 PF01751 Toprim domain ABUW_3442 PF01638 HxlR-like helix-turn-helix ABUW_3443 PF00107 Zinc-binding dehydrogenase ABUW_3443 PF08240 Alcohol dehydrogenase GroES-like domain ABUW_3446 PF01810 LysE type translocator ABUW_3447 PF03279 Bacterial lipid A biosynthesis acyltransferase ABUW_3449 PF00375 Sodium:dicarboxylate symporter family ABUW_3451 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABUW_3451 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABUW_3455 PF01416 tRNA pseudouridine synthase ABUW_3457 PF01176 Translation initiation factor 1A / IF-1 ABUW_3460 PF00180 Isocitrate/isopropylmalate dehydrogenase ABUW_3462 PF00694 Aconitase C-terminal domain ABUW_3463 PF00330 Aconitase family (aconitate hydratase) ABUW_3465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3465 PF03466 LysR substrate binding domain ABUW_3467 PF00293 NUDIX domain ABUW_3468 PF01590 GAF domain ABUW_3468 PF05524 PEP-utilising enzyme, N-terminal ABUW_3468 PF00391 PEP-utilising enzyme, mobile domain ABUW_3468 PF02896 PEP-utilising enzyme, TIM barrel domain ABUW_3469 PF00141 Peroxidase ABUW_3470 PF12706 Beta-lactamase superfamily domain ABUW_3471 PF03466 LysR substrate binding domain ABUW_3471 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3473 PF02798 Glutathione S-transferase, N-terminal domain ABUW_3474 PF08279 HTH domain ABUW_3474 PF13280 WYL domain ABUW_3475 PF13419 Haloacid dehalogenase-like hydrolase ABUW_3476 PF00849 RNA pseudouridylate synthase ABUW_3476 PF01479 S4 domain ABUW_3478 PF00575 S1 RNA binding domain ABUW_3478 PF12111 Polyribonucleotide phosphorylase C terminal ABUW_3478 PF10150 Ribonuclease E/G family ABUW_3479 PF13193 AMP-binding enzyme C-terminal domain ABUW_3479 PF00501 AMP-binding enzyme ABUW_3482 PF03466 LysR substrate binding domain ABUW_3482 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3483 PF00106 short chain dehydrogenase ABUW_3484 PF04055 Radical SAM superfamily ABUW_3484 PF06969 HemN C-terminal domain ABUW_3486 PF01554 MatE ABUW_3487 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_3487 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABUW_3487 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_3488 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABUW_3488 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_3489 PF03109 ABC1 family ABUW_3490 PF01197 Ribosomal protein L31 ABUW_3492 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABUW_3496 PF03884 DNA gyrase inhibitor YacG ABUW_3497 PF00753 Metallo-beta-lactamase superfamily ABUW_3498 PF00762 Ferrochelatase ABUW_3500 PF01177 Asp/Glu/Hydantoin racemase ABUW_3504 PF01206 Sulfurtransferase TusA ABUW_3505 PF03471 Transporter associated domain ABUW_3505 PF00571 CBS domain ABUW_3506 PF00795 Carbon-nitrogen hydrolase ABUW_3507 PF01588 Putative tRNA binding domain ABUW_3509 PF08334 Type II secretion system (T2SS), protein G ABUW_3509 PF07963 Prokaryotic N-terminal methylation motif ABUW_3510 PF00482 Type II secretion system (T2SS), protein F ABUW_3511 PF00271 Helicase conserved C-terminal domain ABUW_3511 PF00270 DEAD/DEAH box helicase ABUW_3511 PF17764 3′ DNA-binding domain (3′BD) ABUW_3511 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABUW_3511 PF18074 Primosomal protein N C-terminal domain ABUW_3512 PF02254 TrkA-N domain ABUW_3512 PF00999 Sodium/hydrogen exchanger family ABUW_3513 PF01430 Hsp33 protein ABUW_3515 PF01556 DnaJ C terminal domain ABUW_3515 PF00226 DnaJ domain ABUW_3517 PF01544 CorA-like Mg2+ transporter protein ABUW_3518 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABUW_3518 PF01138 3' exoribonuclease family, domain 1 ABUW_3518 PF00575 S1 RNA binding domain ABUW_3518 PF03725 3' exoribonuclease family, domain 2 ABUW_3518 PF00013 KH domain ABUW_3519 PF00312 Ribosomal protein S15 ABUW_3521 PF13538 UvrD-like helicase C-terminal domain ABUW_3522 PF13361 UvrD-like helicase C-terminal domain ABUW_3522 PF00580 UvrD/REP helicase N-terminal domain ABUW_3522 PF12705 PD-(D/E)XK nuclease superfamily ABUW_3523 PF17946 RecC C-terminal domain ABUW_3525 PF03976 Polyphosphate kinase 2 (PPK2) ABUW_3527 PF01209 ubiE/COQ5 methyltransferase family ABUW_3529 PF03109 ABC1 family ABUW_3530 PF01494 FAD binding domain ABUW_3531 PF01502 Phosphoribosyl-AMP cyclohydrolase ABUW_3534 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABUW_3534 PF00361 Proton-conducting membrane transporter ABUW_3534 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ABUW_3534 PF13244 Domain of unknown function (DUF4040) ABUW_3535 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABUW_3536 PF00361 Proton-conducting membrane transporter ABUW_3538 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ABUW_3540 PF02033 Ribosome-binding factor A ABUW_3541 PF08364 Bacterial translation initiation factor IF-2 associated region ABUW_3541 PF11987 Translation-initiation factor 2 ABUW_3541 PF00009 Elongation factor Tu GTP binding domain ABUW_3541 PF04760 Translation initiation factor IF-2, N-terminal region ABUW_3542 PF00575 S1 RNA binding domain ABUW_3542 PF13184 NusA-like KH domain ABUW_3542 PF08529 NusA N-terminal domain ABUW_3543 PF17384 RimP C-terminal SH3 domain ABUW_3543 PF02576 RimP N-terminal domain ABUW_3547 PF03840 Preprotein translocase SecG subunit ABUW_3548 PF00121 Triosephosphate isomerase ABUW_3549 PF00437 Type II/IV secretion system protein ABUW_3549 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ABUW_3550 PF00482 Type II secretion system (T2SS), protein F ABUW_3551 PF01478 Type IV leader peptidase family ABUW_3551 PF06750 Bacterial Peptidase A24 N-terminal domain ABUW_3552 PF01121 Dephospho-CoA kinase ABUW_3554 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABUW_3554 PF00588 SpoU rRNA Methylase family ABUW_3555 PF06865 Pyrimidine/purine nucleoside phosphorylase ABUW_3557 PF02463 RecF/RecN/SMC N terminal domain ABUW_3558 PF02622 Uncharacterized ACR, COG1678 ABUW_3559 PF03652 Holliday junction resolvase ABUW_3560 PF13533 Biotin-lipoyl like ABUW_3565 PF02805 Metal binding domain of Ada ABUW_3565 PF12833 Helix-turn-helix domain ABUW_3565 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABUW_3565 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABUW_3566 PF01066 CDP-alcohol phosphatidyltransferase ABUW_3568 PF01541 GIY-YIG catalytic domain ABUW_3568 PF02151 UvrB/uvrC motif ABUW_3568 PF08459 UvrC Helix-hairpin-helix N-terminal ABUW_3572 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABUW_3572 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABUW_3572 PF00378 Enoyl-CoA hydratase/isomerase ABUW_3573 PF02803 Thiolase, C-terminal domain ABUW_3573 PF00108 Thiolase, N-terminal domain ABUW_3576 PF09278 MerR, DNA binding ABUW_3576 PF00376 MerR family regulatory protein ABUW_3578 PF01323 DSBA-like thioredoxin domain ABUW_3581 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_3581 PF00183 Hsp90 protein ABUW_3584 PF03553 Na+/H+ antiporter family ABUW_3584 PF13726 Na+-H+ antiporter family ABUW_3589 PF05000 RNA polymerase Rpb1, domain 4 ABUW_3589 PF04997 RNA polymerase Rpb1, domain 1 ABUW_3589 PF04998 RNA polymerase Rpb1, domain 5 ABUW_3589 PF04983 RNA polymerase Rpb1, domain 3 ABUW_3589 PF00623 RNA polymerase Rpb1, domain 2 ABUW_3590 PF04563 RNA polymerase beta subunit ABUW_3590 PF04560 RNA polymerase Rpb2, domain 7 ABUW_3590 PF04561 RNA polymerase Rpb2, domain 2 ABUW_3590 PF04565 RNA polymerase Rpb2, domain 3 ABUW_3590 PF00562 RNA polymerase Rpb2, domain 6 ABUW_3590 PF10385 RNA polymerase beta subunit external 1 domain ABUW_3591 PF16320 Ribosomal protein L7/L12 dimerisation domain ABUW_3591 PF00542 Ribosomal protein L7/L12 C-terminal domain ABUW_3592 PF00466 Ribosomal protein L10 ABUW_3593 PF00687 Ribosomal protein L1p/L10e family ABUW_3594 PF03946 Ribosomal protein L11, N-terminal domain ABUW_3594 PF00298 Ribosomal protein L11, RNA binding domain ABUW_3595 PF02357 Transcription termination factor nusG ABUW_3595 PF00467 KOW motif ABUW_3596 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ABUW_3598 PF03144 Elongation factor Tu domain 2 ABUW_3598 PF00009 Elongation factor Tu GTP binding domain ABUW_3598 PF03143 Elongation factor Tu C-terminal domain ABUW_3603 PF04715 Anthranilate synthase component I, N terminal region ABUW_3603 PF00425 chorismate binding enzyme ABUW_3604 PF13419 Haloacid dehalogenase-like hydrolase ABUW_3605 PF12401 Protein of unknown function (DUF2662) ABUW_3605 PF00498 FHA domain ABUW_3606 PF03958 Bacterial type II/III secretion system short domain ABUW_3606 PF00263 Bacterial type II and III secretion system protein ABUW_3609 PF00816 H-NS histone family ABUW_3614 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABUW_3614 PF03900 Porphobilinogen deaminase, C-terminal domain ABUW_3615 PF00072 Response regulator receiver domain ABUW_3615 PF04397 LytTr DNA-binding domain ABUW_3616 PF07694 5TMR of 5TMR-LYT ABUW_3616 PF06580 Histidine kinase ABUW_3616 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_3617 PF14698 Argininosuccinate lyase C-terminal ABUW_3617 PF00206 Lyase ABUW_3618 PF04362 Bacterial Fe(2+) trafficking ABUW_3619 PF01895 PhoU domain ABUW_3620 PF02321 Outer membrane efflux protein ABUW_3621 PF00892 EamA-like transporter family ABUW_3624 PF13667 ThiC-associated domain ABUW_3624 PF01964 Radical SAM ThiC family ABUW_3626 PF00149 Calcineurin-like phosphoesterase ABUW_3627 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABUW_3628 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABUW_3629 PF01098 Cell cycle protein ABUW_3630 PF08245 Mur ligase middle domain ABUW_3630 PF02875 Mur ligase family, glutamate ligase domain ABUW_3632 PF07664 Ferrous iron transport protein B C terminus ABUW_3632 PF07670 Nucleoside recognition ABUW_3632 PF02421 Ferrous iron transport protein B ABUW_3634 PF02899 Phage integrase, N-terminal SAM-like domain ABUW_3634 PF00589 Phage integrase family ABUW_3635 PF10411 Disulfide bond isomerase protein N-terminus ABUW_3635 PF13098 Thioredoxin-like domain ABUW_3636 PF03447 Homoserine dehydrogenase, NAD binding domain ABUW_3636 PF00742 Homoserine dehydrogenase ABUW_3636 PF01842 ACT domain ABUW_3637 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_3638 PF00768 D-alanyl-D-alanine carboxypeptidase ABUW_3639 PF00196 Bacterial regulatory proteins, luxR family ABUW_3639 PF00072 Response regulator receiver domain ABUW_3640 PF00512 His Kinase A (phospho-acceptor) domain ABUW_3640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_3641 PF02954 Bacterial regulatory protein, Fis family ABUW_3641 PF00072 Response regulator receiver domain ABUW_3641 PF00158 Sigma-54 interaction domain ABUW_3642 PF03572 Peptidase family S41 ABUW_3642 PF00595 PDZ domain ABUW_3643 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ABUW_3643 PF01676 Metalloenzyme superfamily ABUW_3644 PF03739 Lipopolysaccharide export system permease LptF/LptG ABUW_3646 PF00883 Cytosol aminopeptidase family, catalytic domain ABUW_3646 PF02789 Cytosol aminopeptidase family, N-terminal domain ABUW_3650 PF00677 Lumazine binding domain ABUW_3652 PF01872 RibD C-terminal domain ABUW_3652 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABUW_3653 PF03477 ATP cone domain ABUW_3654 PF00909 Ammonium Transporter Family ABUW_3655 PF00543 Nitrogen regulatory protein P-II ABUW_3659 PF00916 Sulfate permease family ABUW_3659 PF01740 STAS domain ABUW_3663 PF01252 Signal peptidase (SPase) II ABUW_3665 PF13411 MerR HTH family regulatory protein ABUW_3667 PF03960 ArsC family ABUW_3668 PF01022 Bacterial regulatory protein, arsR family ABUW_3670 PF01758 Sodium Bile acid symporter family ABUW_3671 PF03358 NADPH-dependent FMN reductase ABUW_3672 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_3677 PF00665 Integrase core domain ABUW_3680 PF00392 Bacterial regulatory proteins, gntR family ABUW_3680 PF00155 Aminotransferase class I and II ABUW_3682 PF00701 Dihydrodipicolinate synthetase family ABUW_3685 PF03573 outer membrane porin, OprD family ABUW_3686 PF00719 Inorganic pyrophosphatase ABUW_3689 PF13193 AMP-binding enzyme C-terminal domain ABUW_3689 PF00501 AMP-binding enzyme ABUW_3690 PF00521 DNA gyrase/topoisomerase IV, subunit A ABUW_3690 PF03989 DNA gyrase C-terminal domain, beta-propeller ABUW_3691 PF07690 Major Facilitator Superfamily ABUW_3692 PF03458 UPF0126 domain ABUW_3693 PF02810 SEC-C motif ABUW_3694 PF03741 Integral membrane protein TerC family ABUW_3694 PF03471 Transporter associated domain ABUW_3696 PF03641 Possible lysine decarboxylase ABUW_3697 PF07690 Major Facilitator Superfamily ABUW_3699 PF00817 impB/mucB/samB family ABUW_3699 PF11799 impB/mucB/samB family C-terminal domain ABUW_3699 PF11798 IMS family HHH motif ABUW_3703 PF08497 Radical SAM N-terminal ABUW_3703 PF04055 Radical SAM superfamily ABUW_3703 PF11842 Domain of unknown function (DUF3362) ABUW_3707 PF03358 NADPH-dependent FMN reductase ABUW_3709 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_3716 PF00440 Bacterial regulatory proteins, tetR family ABUW_3721 PF01327 Polypeptide deformylase ABUW_3723 PF02481 DNA recombination-mediator protein A ABUW_3723 PF17782 DprA winged helix domain ABUW_3724 PF01300 Telomere recombination ABUW_3725 PF00892 EamA-like transporter family ABUW_3726 PF00440 Bacterial regulatory proteins, tetR family ABUW_3727 PF07690 Major Facilitator Superfamily ABUW_3729 PF00255 Glutathione peroxidase ABUW_3731 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABUW_3732 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABUW_3732 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABUW_3733 PF00231 ATP synthase ABUW_3734 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABUW_3734 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABUW_3734 PF00306 ATP synthase alpha/beta chain, C terminal domain ABUW_3735 PF00213 ATP synthase delta (OSCP) subunit ABUW_3736 PF00430 ATP synthase B/B' CF(0) ABUW_3737 PF00137 ATP synthase subunit C ABUW_3738 PF00119 ATP synthase A chain ABUW_3742 PF00005 ABC transporter ABUW_3743 PF00950 ABC 3 transport family ABUW_3744 PF01810 LysE type translocator ABUW_3745 PF04261 Dyp-type peroxidase family ABUW_3746 PF03949 Malic enzyme, NAD binding domain ABUW_3746 PF00390 Malic enzyme, N-terminal domain ABUW_3747 PF05746 DALR anticodon binding domain ABUW_3747 PF03485 Arginyl tRNA synthetase N terminal domain ABUW_3747 PF00750 tRNA synthetases class I (R) ABUW_3751 PF05726 Pirin C-terminal cupin domain ABUW_3751 PF02678 Pirin ABUW_3753 PF03551 Transcriptional regulator PadR-like family ABUW_3754 PF13427 Domain of unknown function (DUF4111) ABUW_3754 PF01909 Nucleotidyltransferase domain ABUW_3755 PF00958 GMP synthase C terminal domain ABUW_3755 PF02540 NAD synthase ABUW_3755 PF00117 Glutamine amidotransferase class-I ABUW_3756 PF04286 Protein of unknown function (DUF445) ABUW_3757 PF07681 DoxX ABUW_3758 PF09335 SNARE associated Golgi protein ABUW_3761 PF13614 AAA domain ABUW_3763 PF01722 BolA-like protein ABUW_3766 PF01648 4'-phosphopantetheinyl transferase superfamily ABUW_3767 PF12697 Alpha/beta hydrolase family ABUW_3770 PF00501 AMP-binding enzyme ABUW_3770 PF00975 Thioesterase domain ABUW_3770 PF00550 Phosphopantetheine attachment site ABUW_3770 PF00668 Condensation domain ABUW_3770 PF13193 AMP-binding enzyme C-terminal domain ABUW_3771 PF02801 Beta-ketoacyl synthase, C-terminal domain ABUW_3771 PF16197 Ketoacyl-synthetase C-terminal extension ABUW_3771 PF00975 Thioesterase domain ABUW_3771 PF14765 Polyketide synthase dehydratase ABUW_3771 PF00109 Beta-ketoacyl synthase, N-terminal domain ABUW_3771 PF00550 Phosphopantetheine attachment site ABUW_3771 PF08242 Methyltransferase domain ABUW_3772 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_3772 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_3772 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_3773 PF00501 AMP-binding enzyme ABUW_3774 PF00196 Bacterial regulatory proteins, luxR family ABUW_3774 PF03472 Autoinducer binding domain ABUW_3776 PF00765 Autoinducer synthase ABUW_3777 PF07690 Major Facilitator Superfamily ABUW_3777 PF00083 Sugar (and other) transporter ABUW_3778 PF00378 Enoyl-CoA hydratase/isomerase ABUW_3779 PF00378 Enoyl-CoA hydratase/isomerase ABUW_3780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_3780 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_3780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_3781 PF13193 AMP-binding enzyme C-terminal domain ABUW_3781 PF00501 AMP-binding enzyme ABUW_3782 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABUW_3782 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABUW_3783 PF00171 Aldehyde dehydrogenase family ABUW_3785 PF00324 Amino acid permease ABUW_3786 PF00324 Amino acid permease ABUW_3787 PF01042 Endoribonuclease L-PSP ABUW_3788 PF01168 Alanine racemase, N-terminal domain ABUW_3788 PF00842 Alanine racemase, C-terminal domain ABUW_3789 PF01266 FAD dependent oxidoreductase ABUW_3790 PF01037 Lrp/AsnC ligand binding domain ABUW_3792 PF07715 TonB-dependent Receptor Plug Domain ABUW_3792 PF00593 TonB dependent receptor ABUW_3800 PF00872 Transposase, Mutator family ABUW_3803 PF13737 Transposase DDE domain ABUW_3806 PF00330 Aconitase family (aconitate hydratase) ABUW_3806 PF00694 Aconitase C-terminal domain ABUW_3807 PF00285 Citrate synthase, C-terminal domain ABUW_3809 PF00392 Bacterial regulatory proteins, gntR family ABUW_3809 PF07729 FCD domain ABUW_3810 PF00155 Aminotransferase class I and II ABUW_3811 PF09330 D-lactate dehydrogenase, membrane binding ABUW_3811 PF01565 FAD binding domain ABUW_3812 PF01070 FMN-dependent dehydrogenase ABUW_3813 PF07729 FCD domain ABUW_3813 PF00392 Bacterial regulatory proteins, gntR family ABUW_3814 PF02652 L-lactate permease ABUW_3815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABUW_3815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABUW_3815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABUW_3815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABUW_3816 PF16363 GDP-mannose 4,6 dehydratase ABUW_3817 PF00342 Phosphoglucose isomerase ABUW_3818 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABUW_3818 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABUW_3818 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABUW_3819 PF00483 Nucleotidyl transferase ABUW_3820 PF02719 Polysaccharide biosynthesis protein ABUW_3821 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABUW_3822 PF14602 Hexapeptide repeat of succinyl-transferase ABUW_3822 PF17836 PglD N-terminal domain ABUW_3822 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_3823 PF02397 Bacterial sugar transferase ABUW_3828 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABUW_3828 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABUW_3828 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABUW_3829 PF02350 UDP-N-acetylglucosamine 2-epimerase ABUW_3830 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABUW_3830 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABUW_3830 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABUW_3831 PF10531 SLBB domain ABUW_3831 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ABUW_3831 PF02563 Polysaccharide biosynthesis/export protein ABUW_3832 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABUW_3833 PF13614 AAA domain ABUW_3833 PF13807 G-rich domain on putative tyrosine kinase ABUW_3833 PF02706 Chain length determinant protein ABUW_3834 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABUW_3834 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABUW_3835 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABUW_3835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABUW_3836 PF03023 Lipid II flippase MurJ ABUW_3837 PF01510 N-acetylmuramoyl-L-alanine amidase ABUW_3838 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABUW_3838 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABUW_3840 PF04185 Phosphoesterase family ABUW_3840 PF05506 Domain of unknown function (DUF756) ABUW_3841 PF01138 3' exoribonuclease family, domain 1 ABUW_3841 PF03725 3' exoribonuclease family, domain 2 ABUW_3842 PF00487 Fatty acid desaturase ABUW_3843 PF00175 Oxidoreductase NAD-binding domain ABUW_3844 PF00440 Bacterial regulatory proteins, tetR family ABUW_3845 PF00440 Bacterial regulatory proteins, tetR family ABUW_3845 PF08360 QacR-like protein, C-terminal region ABUW_3846 PF01323 DSBA-like thioredoxin domain ABUW_3848 PF13419 Haloacid dehalogenase-like hydrolase ABUW_3849 PF00106 short chain dehydrogenase ABUW_3852 PF00583 Acetyltransferase (GNAT) family ABUW_3852 PF00696 Amino acid kinase family ABUW_3853 PF09084 NMT1/THI5 like ABUW_3854 PF09084 NMT1/THI5 like ABUW_3855 PF00296 Luciferase-like monooxygenase ABUW_3856 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_3857 PF00005 ABC transporter ABUW_3858 PF08362 YcdC-like protein, C-terminal region ABUW_3858 PF00440 Bacterial regulatory proteins, tetR family ABUW_3859 PF01048 Phosphorylase superfamily ABUW_3861 PF01687 Riboflavin kinase ABUW_3861 PF06574 FAD synthetase ABUW_3862 PF08264 Anticodon-binding domain of tRNA ABUW_3862 PF00133 tRNA synthetases class I (I, L, M and V) ABUW_3862 PF06827 Zinc finger found in FPG and IleRS ABUW_3863 PF01252 Signal peptidase (SPase) II ABUW_3864 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABUW_3872 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABUW_3873 PF07859 alpha/beta hydrolase fold ABUW_3877 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3877 PF03466 LysR substrate binding domain ABUW_3878 PF01025 GrpE ABUW_3879 PF00012 Hsp70 protein ABUW_3883 PF13406 Transglycosylase SLT domain ABUW_3885 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ABUW_3885 PF02222 ATP-grasp domain ABUW_3886 PF00731 AIR carboxylase ABUW_3888 PF02875 Mur ligase family, glutamate ligase domain ABUW_3888 PF08245 Mur ligase middle domain ABUW_3888 PF01225 Mur ligase family, catalytic domain ABUW_3890 PF01569 PAP2 superfamily ABUW_3891 PF03741 Integral membrane protein TerC family ABUW_3893 PF03738 Glutathionylspermidine synthase preATP-grasp ABUW_3894 PF00355 Rieske [2Fe-2S] domain ABUW_3895 PF01979 Amidohydrolase family ABUW_3897 PF00156 Phosphoribosyl transferase domain ABUW_3899 PF10411 Disulfide bond isomerase protein N-terminus ABUW_3899 PF13098 Thioredoxin-like domain ABUW_3900 PF01545 Cation efflux family ABUW_3900 PF16916 Dimerisation domain of Zinc Transporter ABUW_3901 PF02583 Metal-sensitive transcriptional repressor ABUW_3902 PF10396 GTP-binding protein TrmE N-terminus ABUW_3902 PF12631 MnmE helical domain ABUW_3902 PF01926 50S ribosome-binding GTPase ABUW_3903 PF02096 60Kd inner membrane protein ABUW_3903 PF14849 YidC periplasmic domain ABUW_3904 PF01809 Putative membrane protein insertion efficiency factor ABUW_3905 PF00825 Ribonuclease P ABUW_3906 PF00468 Ribosomal protein L34 ABUW_4012 PF00565 Staphylococcal nuclease homologue ABUW_4013 PF00816 H-NS histone family ABUW_4023 PF13614 AAA domain ABUW_4024 PF02195 ParB-like nuclease domain ABUW_4024 PF17762 HTH domain found in ParB protein ABUW_4028 PF05816 Toxic anion resistance protein (TelA) ABUW_4048 PF00809 Pterin binding enzyme ABUW_4049 PF00893 Small Multidrug Resistance protein ABUW_4050 PF00186 Dihydrofolate reductase ABUW_4055 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase ABUW_4056 PF01636 Phosphotransferase enzyme family ABUW_4057 PF13427 Domain of unknown function (DUF4111) ABUW_4057 PF01909 Nucleotidyltransferase domain ABUW_4059 PF07690 Major Facilitator Superfamily ABUW_4060 PF10706 Aminoglycoside-2''-adenylyltransferase ABUW_4061 PF13495 Phage integrase, N-terminal SAM-like domain ABUW_4061 PF00589 Phage integrase family ABUW_4069 PF00226 DnaJ domain ABUW_4069 PF01556 DnaJ C terminal domain ABUW_4069 PF00684 DnaJ central domain ABUW_4076 PF08751 TrwC relaxase ABUW_4076 PF18340 DNA relaxase TraI 2B/2B-like domain ABUW_4076 PF07057 DNA helicase TraI ABUW_4076 PF18272 single-stranded DNA binding TraI N-terminal subdomain ABUW_4086 PF00665 Integrase core domain ABUW_4086 PF13936 Helix-turn-helix domain ABUW_4087 PF01636 Phosphotransferase enzyme family ABUW_4089 PF00665 Integrase core domain ABUW_4089 PF13936 Helix-turn-helix domain ABUW_4092 PF02796 Helix-turn-helix domain of resolvase ABUW_4092 PF00239 Resolvase, N terminal domain ABUW_4095 PF01464 Transglycosylase SLT domain ABUW_4102 PF13098 Thioredoxin-like domain ABUW_4102 PF10411 Disulfide bond isomerase protein N-terminus ABUW_4109 PF06834 TraU protein ABUW_4111 PF06986 Type-1V conjugative transfer system mating pair stabilisation ABUW_4114 PF06122 Conjugative relaxosome accessory transposon protein ABUW_4118 PF13438 Domain of unknown function (DUF4113) ABUW_4118 PF11798 IMS family HHH motif ABUW_4118 PF00817 impB/mucB/samB family ABUW_4118 PF11799 impB/mucB/samB family C-terminal domain ABUW_5008 PF07715 TonB-dependent Receptor Plug Domain ABUW_5008 PF00593 TonB dependent receptor