ABUW_0001 PF00308 Bacterial dnaA protein ABUW_0001 PF08299 Bacterial dnaA protein helix-turn-helix ABUW_0001 PF11638 DnaA N-terminal domain ABUW_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain ABUW_0002 PF02767 DNA polymerase III beta subunit, central domain ABUW_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain ABUW_0003 PF02463 RecF/RecN/SMC N terminal domain ABUW_0004 PF00204 DNA gyrase B ABUW_0004 PF00986 DNA gyrase B subunit, carboxyl terminus ABUW_0004 PF01751 Toprim domain ABUW_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0005 PF07361 Cytochrome b562 ABUW_0006 PF09335 ABUW_0006 ABUW_0007 PF00005 ABC transporter ABUW_0007 PF12848 ABC transporter ABUW_0011 PF01521 Iron-sulphur cluster biosynthesis ABUW_0012 PF00561 alpha/beta hydrolase fold ABUW_0013 PF03702 Uncharacterised protein family (UPF0075) ABUW_0014 PF00579 tRNA synthetases class I (W and Y) ABUW_0020 PF00043 Glutathione S-transferase, C-terminal domain ABUW_0020 PF13417 Glutathione S-transferase, N-terminal domain ABUW_0022 PF00209 Sodium:neurotransmitter symporter family ABUW_0023 PF16951 ABUW_0023 ABUW_0024 PF01029 NusB family ABUW_0024 PF01189 NOL1/NOP2/sun family ABUW_0025 PF00551 Formyl transferase ABUW_0025 PF02911 Formyl transferase, C-terminal domain ABUW_0026 PF00920 Dehydratase family ABUW_0028 PF01925 ABUW_0028 ABUW_0029 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_0029 PF03466 LysR substrate binding domain ABUW_0030 PF00860 Permease family ABUW_0031 PF00311 Phosphoenolpyruvate carboxylase ABUW_0033 PF00440 Bacterial regulatory proteins, tetR family ABUW_0033 PF14246 AefR-like transcriptional repressor, C-terminal region ABUW_0034 PF16576 ABUW_0034 ABUW_0035 PF00873 AcrB/AcrD/AcrF family ABUW_0037 PF00226 DnaJ domain ABUW_0037 PF00684 DnaJ central domain ABUW_0037 PF01556 DnaJ C terminal domain ABUW_0039 PF01113 Dihydrodipicolinate reductase, N-terminus ABUW_0039 PF05173 Dihydrodipicolinate reductase, C-terminus ABUW_0040 PF01852 START domain ABUW_0041 PF07690 Major Facilitator Superfamily ABUW_0042 PF00248 Aldo/keto reductase family ABUW_0043 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_0043 PF03466 LysR substrate binding domain ABUW_0045 PF00155 Aminotransferase class I and II ABUW_0045 PF00392 Bacterial regulatory proteins, gntR family ABUW_0046 PF00107 Zinc-binding dehydrogenase ABUW_0046 PF08240 Alcohol dehydrogenase GroES-like domain ABUW_0047 PF03352 Methyladenine glycosylase ABUW_0049 PF01551 Peptidase family M23 ABUW_0050 PF00633 Helix-hairpin-helix motif ABUW_0050 PF00730 HhH-GPD superfamily base excision DNA repair protein ABUW_0050 PF14815 NUDIX domain ABUW_0051 PF01230 HIT domain ABUW_0052 PF01738 Dienelactone hydrolase family ABUW_0053 PF07043 ABUW_0053 ABUW_0054 PF03692 ABUW_0054 ABUW_0055 PF07995 Glucose / Sorbosone dehydrogenase ABUW_0056 PF00004 ATPase family associated with various cellular activities (AAA) ABUW_0056 PF12002 MgsA AAA+ ATPase C terminal ABUW_0056 PF16193 ABUW_0056 ABUW_0057 PF01226 Formate/nitrite transporter ABUW_0059 PF01259 SAICAR synthetase ABUW_0061 PF00701 Dihydrodipicolinate synthetase family ABUW_0062 PF00857 Isochorismatase family ABUW_0063 PF01758 Sodium Bile acid symporter family ABUW_0064 PF01554 MatE ABUW_0065 PF04463 ABUW_0065 ABUW_0066 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABUW_0066 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ABUW_0067 PF01614 Bacterial transcriptional regulator ABUW_0067 PF09339 IclR helix-turn-helix domain ABUW_0068 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABUW_0069 PF02798 Glutathione S-transferase, N-terminal domain ABUW_0069 PF14497 Glutathione S-transferase, C-terminal domain ABUW_0070 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABUW_0070 PF09298 Fumarylacetoacetase N-terminal ABUW_0071 PF00324 Amino acid permease ABUW_0072 PF08291 Peptidase M15 ABUW_0073 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABUW_0073 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABUW_0074 PF01757 ABUW_0074 ABUW_0075 PF00392 Bacterial regulatory proteins, gntR family ABUW_0075 PF07702 UTRA domain ABUW_0076 PF05962 HutD ABUW_0077 PF01175 Urocanase ABUW_0077 PF17391 ABUW_0077 ABUW_0077 PF17392 ABUW_0077 ABUW_0078 PF00221 Aromatic amino acid lyase ABUW_0079 PF00324 Amino acid permease ABUW_0080 PF01979 Amidohydrolase family ABUW_0081 PF00491 Arginase family ABUW_0082 PF05960 Bacterial protein of unknown function (DUF885) ABUW_0083 PF13419 Haloacid dehalogenase-like hydrolase ABUW_0084 PF01177 Asp/Glu/Hydantoin racemase ABUW_0086 PF00145 C-5 cytosine-specific DNA methylase ABUW_0087 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0087 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0089 PF01380 SIS domain ABUW_0089 PF13522 Glutamine amidotransferase domain ABUW_0090 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_0090 PF12804 MobA-like NTP transferase domain ABUW_0090 PF14602 Hexapeptide repeat of succinyl-transferase ABUW_0091 PF04608 Phosphatidylglycerophosphatase A ABUW_0092 PF00586 AIR synthase related protein, N-terminal domain ABUW_0092 PF02769 AIR synthase related protein, C-terminal domain ABUW_0093 PF01029 NusB family ABUW_0094 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABUW_0095 PF00925 GTP cyclohydrolase II ABUW_0095 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABUW_0097 PF12710 haloacid dehalogenase-like hydrolase ABUW_0097 PF13740 ACT domain ABUW_0100 PF02580 D-Tyr-tRNA(Tyr) deacylase ABUW_0101 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABUW_0102 PF00581 Rhodanese-like domain ABUW_0103 PF02666 ABUW_0103 ABUW_0104 PF12146 Putative lysophospholipase ABUW_0105 PF00512 His Kinase A (phospho-acceptor) domain ABUW_0105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0105 PF11808 ABUW_0105 ABUW_0105 PF13188 PAS domain ABUW_0106 PF00072 Response regulator receiver domain ABUW_0106 PF00486 Transcriptional regulatory protein, C terminal ABUW_0108 PF00106 short chain dehydrogenase ABUW_0109 PF01554 MatE ABUW_0110 PF00155 Aminotransferase class I and II ABUW_0111 PF04286 ABUW_0111 ABUW_0113 PF06041 Bacterial protein of unknown function (DUF924) ABUW_0114 PF04262 Glutamate-cysteine ligase ABUW_0115 PF02600 Disulfide bond formation protein DsbB ABUW_0116 PF05954 Phage late control gene D protein (GPD) ABUW_0116 PF10106 ABUW_0116 ABUW_0116 PF13296 ABUW_0116 ABUW_0117 PF01476 LysM domain ABUW_0120 PF07007 Protein of unknown function (DUF1311) ABUW_0122 PF07819 PGAP1-like protein ABUW_0123 PF05728 Uncharacterised protein family (UPF0227) ABUW_0124 PF00204 DNA gyrase B ABUW_0124 PF00986 DNA gyrase B subunit, carboxyl terminus ABUW_0124 PF01751 Toprim domain ABUW_0124 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0125 PF04115 Ureidoglycolate hydrolase ABUW_0126 PF03561 Allantoicase repeat ABUW_0127 PF01494 FAD binding domain ABUW_0128 PF03502 Nucleoside-specific channel-forming protein, Tsx ABUW_0129 PF00860 Permease family ABUW_0130 PF00576 HIUase/Transthyretin family ABUW_0131 PF09349 OHCU decarboxylase ABUW_0132 PF01522 Polysaccharide deacetylase ABUW_0133 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABUW_0135 PF13557 ABUW_0135 ABUW_0136 PF00085 Thioredoxin ABUW_0136 PF02683 ABUW_0136 ABUW_0136 PF11412 Disulphide bond corrector protein DsbC ABUW_0137 PF00990 GGDEF domain ABUW_0138 PF07859 alpha/beta hydrolase fold ABUW_0139 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) ABUW_0140 PF03960 ArsC family ABUW_0141 PF03372 Endonuclease/Exonuclease/phosphatase family ABUW_0142 PF00156 Phosphoribosyl transferase domain ABUW_0143 PF00593 TonB dependent receptor ABUW_0143 PF07715 TonB-dependent Receptor Plug Domain ABUW_0144 PF08410 ABUW_0144 ABUW_0145 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ABUW_0145 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ABUW_0146 PF03033 Glycosyltransferase family 28 N-terminal domain ABUW_0146 PF04101 Glycosyltransferase family 28 C-terminal domain ABUW_0147 PF01225 Mur ligase family, catalytic domain ABUW_0147 PF02875 Mur ligase family, glutamate ligase domain ABUW_0147 PF08245 Mur ligase middle domain ABUW_0148 PF01820 D-ala D-ala ligase N-terminus ABUW_0148 PF07478 D-ala D-ala ligase C-terminus ABUW_0149 PF03799 Cell division protein FtsQ ABUW_0149 PF08478 POTRA domain, FtsQ-type ABUW_0150 PF02491 SHS2 domain inserted in FTSA ABUW_0150 PF14450 Cell division protein FtsA ABUW_0151 PF00091 Tubulin/FtsZ family, GTPase domain ABUW_0151 PF12327 FtsZ family, C-terminal domain ABUW_0152 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ABUW_0153 PF05258 ABUW_0153 ABUW_0154 PF01551 Peptidase family M23 ABUW_0155 PF00456 Transketolase, thiamine diphosphate binding domain ABUW_0156 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABUW_0156 PF00364 Biotin-requiring enzyme ABUW_0156 PF02817 e3 binding domain ABUW_0158 PF01169 ABUW_0158 ABUW_0159 PF00593 TonB dependent receptor ABUW_0159 PF07715 TonB-dependent Receptor Plug Domain ABUW_0160 PF00753 Metallo-beta-lactamase superfamily ABUW_0161 PF03692 ABUW_0161 ABUW_0162 PF00478 IMP dehydrogenase / GMP reductase domain ABUW_0162 PF00571 CBS domain ABUW_0163 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABUW_0163 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABUW_0163 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABUW_0163 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABUW_0164 PF01243 Pyridoxamine 5'-phosphate oxidase ABUW_0164 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ABUW_0165 PF01368 DHH family ABUW_0165 PF02272 DHHA1 domain ABUW_0166 PF16956 ABUW_0166 ABUW_0167 PF00472 RF-1 domain ABUW_0167 PF03462 PCRF domain ABUW_0169 PF12840 Helix-turn-helix domain ABUW_0170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABUW_0171 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ABUW_0172 PF04452 RNA methyltransferase ABUW_0173 PF00924 Mechanosensitive ion channel ABUW_0174 PF05656 ABUW_0174 ABUW_0175 PF00501 AMP-binding enzyme ABUW_0175 PF13193 AMP-binding enzyme C-terminal domain ABUW_0175 PF16177 ABUW_0175 ABUW_0176 PF00857 Isochorismatase family ABUW_0177 PF13412 Winged helix-turn-helix DNA-binding ABUW_0178 PF00296 Luciferase-like monooxygenase ABUW_0179 PF03358 NADPH-dependent FMN reductase ABUW_0180 PF00072 Response regulator receiver domain ABUW_0180 PF00196 Bacterial regulatory proteins, luxR family ABUW_0182 PF00072 Response regulator receiver domain ABUW_0182 PF00512 His Kinase A (phospho-acceptor) domain ABUW_0182 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0182 PF12860 ABUW_0182 ABUW_0183 PF04341 ABUW_0183 ABUW_0184 PF00474 Sodium:solute symporter family ABUW_0185 PF07885 Ion channel ABUW_0186 PF02028 BCCT family transporter ABUW_0187 PF16956 ABUW_0187 ABUW_0188 PF00990 GGDEF domain ABUW_0189 PF00005 ABC transporter ABUW_0190 PF00440 Bacterial regulatory proteins, tetR family ABUW_0190 PF16925 ABUW_0190 ABUW_0191 PF00107 Zinc-binding dehydrogenase ABUW_0191 PF08240 Alcohol dehydrogenase GroES-like domain ABUW_0192 PF06993 ABUW_0192 ABUW_0193 PF06942 ABUW_0193 ABUW_0194 PF03070 TENA/THI-4/PQQC family ABUW_0195 PF04332 ABUW_0195 ABUW_0196 PF07690 Major Facilitator Superfamily ABUW_0197 PF00436 Single-strand binding protein family ABUW_0198 PF05437 ABUW_0198 ABUW_0199 PF03591 ABUW_0199 ABUW_0200 PF01381 Helix-turn-helix ABUW_0200 PF07883 Cupin domain ABUW_0201 PF00324 Amino acid permease ABUW_0202 PF00155 Aminotransferase class I and II ABUW_0202 PF00392 Bacterial regulatory proteins, gntR family ABUW_0203 PF00202 Aminotransferase class-III ABUW_0204 PF00171 Aldehyde dehydrogenase family ABUW_0205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_0205 PF03466 LysR substrate binding domain ABUW_0206 PF00857 Isochorismatase family ABUW_0207 PF02678 Pirin ABUW_0207 PF05726 Pirin C-terminal cupin domain ABUW_0208 PF01593 Flavin containing amine oxidoreductase ABUW_0209 PF13489 Methyltransferase domain ABUW_0210 PF04828 Glutathione-dependent formaldehyde-activating enzyme ABUW_0213 PF07690 Major Facilitator Superfamily ABUW_0214 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_0214 PF03466 LysR substrate binding domain ABUW_0215 PF00892 EamA-like transporter family ABUW_0218 PF00248 Aldo/keto reductase family ABUW_0219 PF12833 Helix-turn-helix domain ABUW_0222 PF00440 Bacterial regulatory proteins, tetR family ABUW_0223 PF02627 Carboxymuconolactone decarboxylase family ABUW_0224 PF01638 HxlR-like helix-turn-helix ABUW_0227 PF01638 HxlR-like helix-turn-helix ABUW_0228 PF02525 Flavodoxin-like fold ABUW_0229 PF12833 Helix-turn-helix domain ABUW_0230 PF13302 Acetyltransferase (GNAT) domain ABUW_0232 PF02705 ABUW_0232 ABUW_0234 PF01223 DNA/RNA non-specific endonuclease ABUW_0235 PF01810 ABUW_0235 ABUW_0237 PF00230 Major intrinsic protein ABUW_0238 PF12625 ABUW_0238 ABUW_0238 PF12833 Helix-turn-helix domain ABUW_0240 PF00977 Histidine biosynthesis protein ABUW_0241 PF01636 Phosphotransferase enzyme family ABUW_0242 PF00313 'Cold-shock' DNA-binding domain ABUW_0242 PF06961 ABUW_0242 ABUW_0244 PF00892 EamA-like transporter family ABUW_0245 PF01381 Helix-turn-helix ABUW_0245 PF07883 Cupin domain ABUW_0246 PF00977 Histidine biosynthesis protein ABUW_0247 PF01612 3'-5' exonuclease ABUW_0248 PF05656 ABUW_0248 ABUW_0249 PF00117 Glutamine amidotransferase class-I ABUW_0250 PF00475 Imidazoleglycerol-phosphate dehydratase ABUW_0251 PF12568 Acetyltransferase (GNAT) domain ABUW_0254 PF00583 Acetyltransferase (GNAT) family ABUW_0255 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ABUW_0255 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ABUW_0256 PF00512 His Kinase A (phospho-acceptor) domain ABUW_0256 PF00672 HAMP domain ABUW_0256 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0257 PF00072 Response regulator receiver domain ABUW_0257 PF00486 Transcriptional regulatory protein, C terminal ABUW_0258 PF00575 S1 RNA binding domain ABUW_0258 PF09371 Tex-like protein N-terminal domain ABUW_0258 PF12836 Helix-hairpin-helix motif ABUW_0258 PF16921 ABUW_0258 ABUW_0259 PF00484 Carbonic anhydrase ABUW_0259 PF00916 ABUW_0259 ABUW_0260 PF00106 short chain dehydrogenase ABUW_0261 PF01053 Cys/Met metabolism PLP-dependent enzyme ABUW_0262 PF00005 ABC transporter ABUW_0262 PF12848 ABC transporter ABUW_0266 PF02321 Outer membrane efflux protein ABUW_0267 PF16576 ABUW_0267 ABUW_0268 PF00873 AcrB/AcrD/AcrF family ABUW_0269 PF01545 Cation efflux family ABUW_0275 PF00324 Amino acid permease ABUW_0278 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABUW_0280 PF13531 Bacterial extracellular solute-binding protein ABUW_0281 PF01795 MraW methylase family ABUW_0282 PF04999 ABUW_0282 ABUW_0283 PF00905 Penicillin binding protein transpeptidase domain ABUW_0283 PF03717 Penicillin-binding Protein dimerisation domain ABUW_0284 PF02875 Mur ligase family, glutamate ligase domain ABUW_0284 PF08245 Mur ligase middle domain ABUW_0285 PF01225 Mur ligase family, catalytic domain ABUW_0285 PF02875 Mur ligase family, glutamate ligase domain ABUW_0285 PF08245 Mur ligase middle domain ABUW_0286 PF00953 Glycosyl transferase family 4 ABUW_0288 PF08241 Methyltransferase domain ABUW_0289 PF00905 Penicillin binding protein transpeptidase domain ABUW_0289 PF00912 Transglycosylase ABUW_0289 PF17092 ABUW_0289 ABUW_0290 PF11104 Type IV pilus assembly protein PilM; ABUW_0291 PF05137 ABUW_0291 ABUW_0292 PF04350 Pilus assembly protein, PilO ABUW_0293 PF04351 Pilus assembly protein, PilP ABUW_0294 PF00263 ABUW_0294 ABUW_0294 PF03958 Bacterial type II/III secretion system short domain ABUW_0294 PF07660 Secretin and TonB N terminus short domain ABUW_0294 PF11741 AMIN domain ABUW_0295 PF01202 Shikimate kinase ABUW_0296 PF01761 3-dehydroquinate synthase ABUW_0298 PF00310 Glutamine amidotransferases class-II ABUW_0298 PF01493 GXGXG motif ABUW_0298 PF01645 Conserved region in glutamate synthase ABUW_0298 PF04898 Glutamate synthase central domain ABUW_0299 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_0299 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABUW_0300 PF10118 ABUW_0300 ABUW_0301 PF04011 LemA family ABUW_0302 PF04536 TLP18 ABUW_0303 PF04536 TLP18 ABUW_0304 PF00114 Pilin (bacterial filament) ABUW_0304 PF07963 Prokaryotic N-terminal methylation motif ABUW_0305 PF04932 ABUW_0305 ABUW_0305 PF11846 ABUW_0305 ABUW_0305 PF15864 ABUW_0305 ABUW_0306 PF00210 Ferritin-like domain ABUW_0307 PF04324 BFD-like [2Fe-2S] binding domain ABUW_0308 PF01042 Endoribonuclease L-PSP ABUW_0309 PF02824 TGS domain ABUW_0309 PF13328 HD domain ABUW_0310 PF01192 RNA polymerase Rpb6 ABUW_0311 PF00625 Guanylate kinase ABUW_0312 PF02401 LytB protein ABUW_0313 PF07963 Prokaryotic N-terminal methylation motif ABUW_0313 PF12019 Type II transport protein GspH ABUW_0314 PF07963 Prokaryotic N-terminal methylation motif ABUW_0315 PF07963 Prokaryotic N-terminal methylation motif ABUW_0315 PF16074 ABUW_0315 ABUW_0317 PF05567 Neisseria PilC beta-propeller domain ABUW_0317 PF13519 von Willebrand factor type A domain ABUW_0318 PF07963 Prokaryotic N-terminal methylation motif ABUW_0318 PF16732 ABUW_0318 ABUW_0319 PF07963 Prokaryotic N-terminal methylation motif ABUW_0319 PF16732 ABUW_0319 ABUW_0320 PF00886 Ribosomal protein S16 ABUW_0321 PF01782 RimM N-terminal domain ABUW_0321 PF05239 PRC-barrel domain ABUW_0322 PF01746 tRNA (Guanine-1)-methyltransferase ABUW_0323 PF01245 Ribosomal protein L19 ABUW_0324 PF00561 alpha/beta hydrolase fold ABUW_0325 PF03280 Proteobacterial lipase chaperone protein ABUW_0326 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABUW_0326 PF09157 Pseudouridine synthase II TruB, C-terminal ABUW_0326 PF16198 ABUW_0326 ABUW_0327 PF01925 ABUW_0327 ABUW_0328 PF01814 Hemerythrin HHE cation binding domain ABUW_0329 PF00892 EamA-like transporter family ABUW_0330 PF00892 EamA-like transporter family ABUW_0331 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABUW_0331 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABUW_0332 PF01565 FAD binding domain ABUW_0332 PF02913 FAD linked oxidases, C-terminal domain ABUW_0334 PF03992 Antibiotic biosynthesis monooxygenase ABUW_0335 PF02525 Flavodoxin-like fold ABUW_0337 PF07690 Major Facilitator Superfamily ABUW_0338 PF12805 ABUW_0338 ABUW_0338 PF13515 ABUW_0338 ABUW_0339 PF00080 Copper/zinc superoxide dismutase (SODC) ABUW_0340 PF01594 ABUW_0340 ABUW_0341 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABUW_0342 PF10107 ABUW_0342 ABUW_0345 PF08241 Methyltransferase domain ABUW_0347 PF00324 Amino acid permease ABUW_0350 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABUW_0350 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABUW_0351 PF00202 Aminotransferase class-III ABUW_0352 PF04958 Arginine N-succinyltransferase beta subunit ABUW_0353 PF00171 Aldehyde dehydrogenase family ABUW_0354 PF04996 Succinylarginine dihydrolase ABUW_0355 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ABUW_0358 PF00082 Subtilase family ABUW_0361 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_0361 PF03466 LysR substrate binding domain ABUW_0362 PF00892 EamA-like transporter family ABUW_0363 PF03795 YCII-related domain ABUW_0364 PF03235 ABUW_0364 ABUW_0366 PF02092 ABUW_0366 ABUW_0366 PF05746 DALR anticodon binding domain ABUW_0367 PF02091 Glycyl-tRNA synthetase alpha subunit ABUW_0368 PF07690 Major Facilitator Superfamily ABUW_0370 PF13566 ABUW_0370 ABUW_0371 PF00571 CBS domain ABUW_0371 PF04982 ABUW_0371 ABUW_0372 PF04024 ABUW_0372 ABUW_0374 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_0374 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_0374 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_0374 PF12418 ABUW_0374 ABUW_0374 PF12806 ABUW_0374 ABUW_0376 PF01488 Shikimate / quinate 5-dehydrogenase ABUW_0376 PF08501 Shikimate dehydrogenase substrate binding domain ABUW_0377 PF01218 Coproporphyrinogen III oxidase ABUW_0378 PF00925 GTP cyclohydrolase II ABUW_0379 PF02779 Transketolase, pyrimidine binding domain ABUW_0379 PF02780 Transketolase, C-terminal domain ABUW_0379 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABUW_0380 PF00459 Inositol monophosphatase family ABUW_0381 PF00270 DEAD/DEAH box helicase ABUW_0381 PF00271 Helicase conserved C-terminal domain ABUW_0383 PF00005 ABC transporter ABUW_0384 PF02405 ABUW_0384 ABUW_0385 PF02470 ABUW_0385 ABUW_0386 PF05494 Toluene tolerance, Ttg2 ABUW_0387 PF13466 STAS domain ABUW_0388 PF01544 CorA-like Mg2+ transporter protein ABUW_0389 PF03641 Possible lysine decarboxylase ABUW_0390 PF00293 NUDIX domain ABUW_0391 PF00156 Phosphoribosyl transferase domain ABUW_0392 PF00270 DEAD/DEAH box helicase ABUW_0392 PF00271 Helicase conserved C-terminal domain ABUW_0392 PF17191 ABUW_0392 ABUW_0393 PF13460 NADH(P)-binding ABUW_0394 PF03480 Bacterial extracellular solute-binding protein, family 7 ABUW_0395 PF01553 Acyltransferase ABUW_0396 PF13622 Thioesterase-like superfamily ABUW_0397 PF00375 Sodium:dicarboxylate symporter family ABUW_0398 PF10118 ABUW_0398 ABUW_0399 PF01926 50S ribosome-binding GTPase ABUW_0400 PF02082 Transcriptional regulator ABUW_0401 PF00042 Globin ABUW_0402 PF05872 ABUW_0402 ABUW_0403 PF01053 Cys/Met metabolism PLP-dependent enzyme ABUW_0404 PF00117 Glutamine amidotransferase class-I ABUW_0405 PF00338 Ribosomal protein S10p/S20e ABUW_0406 PF00297 Ribosomal protein L3 ABUW_0407 PF00573 Ribosomal protein L4/L1 family ABUW_0408 PF00276 Ribosomal protein L23 ABUW_0409 PF00181 Ribosomal Proteins L2, RNA binding domain ABUW_0409 PF03947 Ribosomal Proteins L2, C-terminal domain ABUW_0410 PF00203 Ribosomal protein S19 ABUW_0411 PF00237 Ribosomal protein L22p/L17e ABUW_0412 PF00189 Ribosomal protein S3, C-terminal domain ABUW_0412 PF07650 KH domain ABUW_0413 PF00252 Ribosomal protein L16p/L10e ABUW_0414 PF00831 Ribosomal L29 protein ABUW_0415 PF00366 Ribosomal protein S17 ABUW_0416 PF00238 Ribosomal protein L14p/L23e ABUW_0417 PF00467 KOW motif ABUW_0417 PF17136 ABUW_0417 ABUW_0418 PF00281 Ribosomal protein L5 ABUW_0418 PF00673 ribosomal L5P family C-terminus ABUW_0419 PF00253 Ribosomal protein S14p/S29e ABUW_0420 PF00410 Ribosomal protein S8 ABUW_0421 PF00347 Ribosomal protein L6 ABUW_0422 PF00861 Ribosomal L18p/L5e family ABUW_0423 PF00333 Ribosomal protein S5, N-terminal domain ABUW_0423 PF03719 Ribosomal protein S5, C-terminal domain ABUW_0424 PF00327 Ribosomal protein L30p/L7e ABUW_0425 PF00828 Ribosomal protein L18e/L15 ABUW_0426 PF00344 SecY translocase ABUW_0427 PF00444 Ribosomal protein L36 ABUW_0428 PF00416 Ribosomal protein S13/S18 ABUW_0429 PF00411 Ribosomal protein S11 ABUW_0430 PF00163 Ribosomal protein S4/S9 N-terminal domain ABUW_0430 PF01479 S4 domain ABUW_0431 PF01000 RNA polymerase Rpb3/RpoA insert domain ABUW_0431 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABUW_0431 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABUW_0432 PF01196 Ribosomal protein L17 ABUW_0433 PF00743 Flavin-binding monooxygenase-like ABUW_0433 PF13450 NAD(P)-binding Rossmann-like domain ABUW_0434 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_0434 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_0434 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_0435 PF03937 Flavinator of succinate dehydrogenase ABUW_0439 PF01694 Rhomboid family ABUW_0440 PF06808 ABUW_0440 ABUW_0442 PF09526 ABUW_0442 ABUW_0443 PF01432 Peptidase family M3 ABUW_0444 PF00575 S1 RNA binding domain ABUW_0444 PF00773 RNB domain ABUW_0444 PF08206 Ribonuclease B OB domain ABUW_0448 PF12710 haloacid dehalogenase-like hydrolase ABUW_0451 PF00881 Nitroreductase family ABUW_0453 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABUW_0454 PF02311 AraC-like ligand binding domain ABUW_0454 PF12833 Helix-turn-helix domain ABUW_0455 PF00892 EamA-like transporter family ABUW_0456 PF03631 ABUW_0456 ABUW_0457 PF03358 NADPH-dependent FMN reductase ABUW_0459 PF11306 Protein of unknown function (DUF3108) ABUW_0461 PF03544 Gram-negative bacterial TonB protein C-terminal ABUW_0462 PF02130 Uncharacterized protein family UPF0054 ABUW_0463 PF02562 PhoH-like protein ABUW_0464 PF00919 Uncharacterized protein family UPF0004 ABUW_0464 PF01938 TRAM domain ABUW_0464 PF04055 Radical SAM superfamily ABUW_0465 PF01464 Transglycosylase SLT domain ABUW_0466 PF00445 Ribonuclease T2 family ABUW_0467 PF00056 lactate/malate dehydrogenase, NAD binding domain ABUW_0467 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABUW_0468 PF10982 Protein of unknown function (DUF2789) ABUW_0470 PF13640 2OG-Fe(II) oxygenase superfamily ABUW_0471 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ ABUW_0472 PF01066 CDP-alcohol phosphatidyltransferase ABUW_0479 PF04828 Glutathione-dependent formaldehyde-activating enzyme ABUW_0480 PF14066 ABUW_0480 ABUW_0481 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_0481 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_0481 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_0482 PF00440 Bacterial regulatory proteins, tetR family ABUW_0484 PF07287 ABUW_0484 ABUW_0485 PF13561 Enoyl-(Acyl carrier protein) reductase ABUW_0486 PF01039 Carboxyl transferase domain ABUW_0487 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_0487 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_0487 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_0488 PF00378 Enoyl-CoA hydratase/isomerase family ABUW_0489 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ABUW_0489 PF00364 Biotin-requiring enzyme ABUW_0489 PF02785 Biotin carboxylase C-terminal domain ABUW_0489 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABUW_0491 PF04386 Stringent starvation protein B ABUW_0492 PF02798 Glutathione S-transferase, N-terminal domain ABUW_0493 PF00380 Ribosomal protein S9/S16 ABUW_0494 PF00572 Ribosomal protein L13 ABUW_0495 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABUW_0496 PF00398 Ribosomal RNA adenine dimethylase ABUW_0497 PF00149 Calcineurin-like phosphoesterase ABUW_0498 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) ABUW_0499 PF04172 ABUW_0499 ABUW_0501 PF01926 50S ribosome-binding GTPase ABUW_0501 PF13167 ABUW_0501 ABUW_0501 PF16360 ABUW_0501 ABUW_0502 PF01553 Acyltransferase ABUW_0503 PF13091 PLD-like domain ABUW_0504 PF00149 Calcineurin-like phosphoesterase ABUW_0505 PF00691 OmpA family ABUW_0506 PF00990 GGDEF domain ABUW_0506 PF17152 ABUW_0506 ABUW_0507 PF13689 ABUW_0507 ABUW_0513 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABUW_0513 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_0515 PF04273 Putative phosphatase (DUF442) ABUW_0516 PF12146 Putative lysophospholipase ABUW_0517 PF00085 Thioredoxin ABUW_0518 PF03061 Thioesterase superfamily ABUW_0519 PF14539 Domain of unknown function (DUF4442) ABUW_0520 PF04461 Protein of unknown function (DUF520) ABUW_0521 PF00581 Rhodanese-like domain ABUW_0522 PF01266 FAD dependent oxidoreductase ABUW_0522 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABUW_0524 PF03795 YCII-related domain ABUW_0525 PF04279 ABUW_0525 ABUW_0526 PF02811 PHP domain ABUW_0527 PF01062 ABUW_0527 ABUW_0528 PF04002 RadC-like JAB domain ABUW_0529 PF02441 Flavoprotein ABUW_0529 PF04127 DNA / pantothenate metabolism flavoprotein ABUW_0530 PF02355 Protein export membrane protein ABUW_0530 PF07549 SecD/SecF GG Motif ABUW_0531 PF02355 Protein export membrane protein ABUW_0531 PF07549 SecD/SecF GG Motif ABUW_0531 PF13721 SecD export protein N-terminal TM region ABUW_0532 PF02699 Preprotein translocase subunit ABUW_0533 PF01702 Queuine tRNA-ribosyltransferase ABUW_0534 PF04011 LemA family ABUW_0536 PF02547 Queuosine biosynthesis protein ABUW_0538 PF00589 Phage integrase family ABUW_0541 PF00929 Exonuclease ABUW_0542 PF00436 Single-strand binding protein family ABUW_0547 PF13155 Toprim-like ABUW_0551 PF09669 ABUW_0551 ABUW_0553 PF00533 BRCA1 C Terminus (BRCT) domain ABUW_0555 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABUW_0556 PF04606 ABUW_0556 ABUW_0557 PF05954 Phage late control gene D protein (GPD) ABUW_0558 PF06995 ABUW_0558 ABUW_0559 PF10145 ABUW_0559 ABUW_0561 PF01609 Transposase DDE domain ABUW_0562 PF01609 Transposase DDE domain ABUW_0563 PF00905 Penicillin binding protein transpeptidase domain ABUW_0564 PF05673 Protein of unknown function (DUF815) ABUW_0565 PF10109 ABUW_0565 ABUW_0566 PF04985 ABUW_0566 ABUW_0567 PF04984 Phage tail sheath protein ABUW_0567 PF17482 ABUW_0567 ABUW_0568 PF12571 ABUW_0568 ABUW_0569 PF09684 ABUW_0569 ABUW_0570 PF04865 ABUW_0570 ABUW_0571 PF04965 Gene 25-like lysozyme ABUW_0572 PF04717 Phage-related baseplate assembly protein ABUW_0573 PF05069 ABUW_0573 ABUW_0574 PF06891 ABUW_0574 ABUW_0575 PF01471 Putative peptidoglycan binding domain ABUW_0575 PF11860 ABUW_0575 ABUW_0576 PF05449 ABUW_0576 ABUW_0577 PF16931 ABUW_0577 ABUW_0578 PF05489 Phage Tail Protein X ABUW_0579 PF05926 ABUW_0579 ABUW_0580 PF05944 ABUW_0580 ABUW_0581 PF05125 ABUW_0581 ABUW_0582 PF05929 ABUW_0582 ABUW_0583 PF03237 Terminase-like family ABUW_0583 PF06056 Putative ATPase subunit of terminase (gpP-like) ABUW_0583 PF17289 ABUW_0583 ABUW_0584 PF04860 Phage portal protein ABUW_0585 PF00512 His Kinase A (phospho-acceptor) domain ABUW_0585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0586 PF03710 Glutamate-ammonia ligase adenylyltransferase ABUW_0586 PF08335 GlnD PII-uridylyltransferase ABUW_0587 PF01063 Aminotransferase class IV ABUW_0588 PF06258 ABUW_0588 ABUW_0589 PF13524 Glycosyl transferases group 1 ABUW_0590 PF01522 Polysaccharide deacetylase ABUW_0591 PF00535 Glycosyl transferase family 2 ABUW_0592 PF00534 Glycosyl transferases group 1 ABUW_0592 PF13439 Glycosyltransferase Family 4 ABUW_0594 PF01755 ABUW_0594 ABUW_0595 PF02350 UDP-N-acetylglucosamine 2-epimerase ABUW_0596 PF04488 Glycosyltransferase sugar-binding region containing DXD motif ABUW_0598 PF00152 tRNA synthetases class II (D, K and N) ABUW_0598 PF01336 OB-fold nucleic acid binding domain ABUW_0598 PF02938 GAD domain ABUW_0599 PF13803 ABUW_0599 ABUW_0600 PF00593 TonB dependent receptor ABUW_0600 PF07715 TonB-dependent Receptor Plug Domain ABUW_0601 PF13091 PLD-like domain ABUW_0603 PF11776 Domain of unknown function (DUF3315) ABUW_0604 PF06146 ABUW_0604 ABUW_0605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_0605 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_0605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_0605 PF12418 ABUW_0605 ABUW_0605 PF12806 ABUW_0605 ABUW_0606 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_0606 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_0606 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_0606 PF12418 ABUW_0606 ABUW_0606 PF12806 ABUW_0606 ABUW_0608 PF00512 His Kinase A (phospho-acceptor) domain ABUW_0608 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0609 PF00072 Response regulator receiver domain ABUW_0609 PF00486 Transcriptional regulatory protein, C terminal ABUW_0610 PF02696 ABUW_0610 ABUW_0611 PF00487 ABUW_0611 ABUW_0612 PF03724 META domain ABUW_0613 PF03009 Glycerophosphoryl diester phosphodiesterase family ABUW_0614 PF01923 Cobalamin adenosyltransferase ABUW_0615 PF00593 TonB dependent receptor ABUW_0615 PF07715 TonB-dependent Receptor Plug Domain ABUW_0616 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ABUW_0617 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_0618 PF07566 Domain of Unknown Function (DUF1543) ABUW_0619 PF10974 ABUW_0619 ABUW_0620 PF10118 ABUW_0620 ABUW_0621 PF12625 ABUW_0621 ABUW_0621 PF12833 Helix-turn-helix domain ABUW_0622 PF00290 Tryptophan synthase alpha chain ABUW_0623 PF01039 Carboxyl transferase domain ABUW_0624 PF02875 Mur ligase family, glutamate ligase domain ABUW_0624 PF08245 Mur ligase middle domain ABUW_0625 PF05036 Sporulation related domain ABUW_0626 PF00782 Dual specificity phosphatase, catalytic domain ABUW_0627 PF00753 Metallo-beta-lactamase superfamily ABUW_0628 PF00578 AhpC/TSA family ABUW_0628 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABUW_0629 PF01043 SecA preprotein cross-linking domain ABUW_0629 PF02810 SEC-C motif ABUW_0629 PF07516 SecA Wing and Scaffold domain ABUW_0629 PF07517 SecA DEAD-like domain ABUW_0631 PF00083 Sugar (and other) transporter ABUW_0632 PF03006 ABUW_0632 ABUW_0633 PF13679 ABUW_0633 ABUW_0634 PF13673 Acetyltransferase (GNAT) domain ABUW_0635 PF01734 Patatin-like phospholipase ABUW_0637 PF00378 Enoyl-CoA hydratase/isomerase family ABUW_0637 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABUW_0637 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABUW_0638 PF00108 Thiolase, N-terminal domain ABUW_0638 PF02803 Thiolase, C-terminal domain ABUW_0639 PF12625 ABUW_0639 ABUW_0639 PF12833 Helix-turn-helix domain ABUW_0640 PF02515 CoA-transferase family III ABUW_0641 PF04966 Carbohydrate-selective porin, OprB family ABUW_0642 PF01011 PQQ enzyme repeat ABUW_0642 PF13360 PQQ-like domain ABUW_0643 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABUW_0643 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABUW_0644 PF06073 ABUW_0644 ABUW_0645 PF00893 Small Multidrug Resistance protein ABUW_0646 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABUW_0647 PF00108 Thiolase, N-terminal domain ABUW_0647 PF02803 Thiolase, C-terminal domain ABUW_0648 PF12019 Type II transport protein GspH ABUW_0649 PF00691 OmpA family ABUW_0649 PF13505 Outer membrane protein beta-barrel domain ABUW_0651 PF01139 tRNA-splicing ligase RtcB ABUW_0652 PF00324 Amino acid permease ABUW_0653 PF05175 Methyltransferase small domain ABUW_0653 PF08468 Methyltransferase small domain N-terminal ABUW_0654 PF00860 Permease family ABUW_0655 PF00009 Elongation factor Tu GTP binding domain ABUW_0655 PF00679 Elongation factor G C-terminus ABUW_0655 PF03144 Elongation factor Tu domain 2 ABUW_0656 PF01741 Large-conductance mechanosensitive channel, MscL ABUW_0657 PF06094 AIG2-like family ABUW_0658 PF00639 PPIC-type PPIASE domain ABUW_0659 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ABUW_0659 PF06827 Zinc finger found in FPG and IleRS ABUW_0659 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ABUW_0660 PF02245 Methylpurine-DNA glycosylase (MPG) ABUW_0661 PF00593 TonB dependent receptor ABUW_0661 PF07715 TonB-dependent Receptor Plug Domain ABUW_0662 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABUW_0663 PF03547 ABUW_0663 ABUW_0664 PF08238 Sel1 repeat ABUW_0665 PF10411 Disulfide bond isomerase protein N-terminus ABUW_0665 PF13098 Thioredoxin-like domain ABUW_0666 PF01571 Aminomethyltransferase folate-binding domain ABUW_0667 PF08327 Activator of Hsp90 ATPase homolog 1-like protein ABUW_0668 PF04343 ABUW_0668 ABUW_0669 PF03831 PhnA protein ABUW_0669 PF08274 PhnA Zinc-Ribbon ABUW_0671 PF01609 Transposase DDE domain ABUW_0672 PF01609 Transposase DDE domain ABUW_0673 PF07411 Domain of unknown function (DUF1508) ABUW_0674 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABUW_0674 PF03129 Anticodon binding domain ABUW_0674 PF04073 Aminoacyl-tRNA editing domain ABUW_0675 PF00873 AcrB/AcrD/AcrF family ABUW_0676 PF13437 HlyD family secretion protein ABUW_0676 PF13533 Biotin-lipoyl like ABUW_0678 PF00072 Response regulator receiver domain ABUW_0679 PF00072 Response regulator receiver domain ABUW_0680 PF01584 CheW-like domain ABUW_0681 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABUW_0682 PF00072 Response regulator receiver domain ABUW_0682 PF01584 CheW-like domain ABUW_0682 PF01627 Hpt domain ABUW_0682 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0684 PF04055 Radical SAM superfamily ABUW_0685 PF12146 Putative lysophospholipase ABUW_0686 PF01546 Peptidase family M20/M25/M40 ABUW_0686 PF07687 Peptidase dimerisation domain ABUW_0687 PF08085 ABUW_0687 ABUW_0688 PF08907 ABUW_0688 ABUW_0689 PF04304 ABUW_0689 ABUW_0690 PF03734 L,D-transpeptidase catalytic domain ABUW_0697 PF02698 DUF218 domain ABUW_0698 PF00175 Oxidoreductase NAD-binding domain ABUW_0698 PF00258 Flavodoxin ABUW_0698 PF03929 ABUW_0698 ABUW_0699 PF14317 ABUW_0699 ABUW_0700 PF12805 ABUW_0700 ABUW_0700 PF13515 ABUW_0700 ABUW_0701 PF07690 Major Facilitator Superfamily ABUW_0702 PF00881 Nitroreductase family ABUW_0704 PF01235 ABUW_0704 ABUW_0705 PF01734 Patatin-like phospholipase ABUW_0706 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_0707 PF05992 ABUW_0707 ABUW_0708 PF16142 ABUW_0708 ABUW_0709 PF06674 ABUW_0709 ABUW_0711 PF01965 DJ-1/PfpI family ABUW_0712 PF02637 GatB domain ABUW_0712 PF02934 GatB/GatE catalytic domain ABUW_0713 PF01425 Amidase ABUW_0714 PF02686 Glu-tRNAGln amidotransferase C subunit ABUW_0715 PF06723 MreB/Mbl protein ABUW_0716 PF04085 rod shape-determining protein MreC ABUW_0717 PF04093 ABUW_0717 ABUW_0718 PF02545 Maf-like protein ABUW_0719 PF00575 S1 RNA binding domain ABUW_0719 PF10150 Ribonuclease E/G family ABUW_0721 PF03007 ABUW_0721 ABUW_0721 PF06974 ABUW_0721 ABUW_0722 PF01507 Phosphoadenosine phosphosulfate reductase family ABUW_0723 PF12710 haloacid dehalogenase-like hydrolase ABUW_0724 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ABUW_0725 PF02525 Flavodoxin-like fold ABUW_0726 PF12625 ABUW_0726 ABUW_0726 PF12833 Helix-turn-helix domain ABUW_0727 PF00487 ABUW_0727 ABUW_0728 PF08223 PaaX-like protein C-terminal domain ABUW_0729 PF02673 ABUW_0729 ABUW_0730 PF06719 ABUW_0730 ABUW_0730 PF12833 Helix-turn-helix domain ABUW_0731 PF00107 Zinc-binding dehydrogenase ABUW_0731 PF08240 Alcohol dehydrogenase GroES-like domain ABUW_0732 PF01965 DJ-1/PfpI family ABUW_0733 PF05930 Prophage CP4-57 regulatory protein (AlpA) ABUW_0745 PF02384 N-6 DNA Methylase ABUW_0747 PF00717 Peptidase S24-like ABUW_0747 PF01381 Helix-turn-helix ABUW_0748 PF14549 DNA-binding transcriptional regulator Cro ABUW_0751 PF00392 Bacterial regulatory proteins, gntR family ABUW_0752 PF00772 DnaB-like helicase N terminal domain ABUW_0752 PF03796 DnaB-like helicase C terminal domain ABUW_0761 PF08774 VRR-NUC domain ABUW_0762 PF00149 Calcineurin-like phosphoesterase ABUW_0767 PF06147 ABUW_0767 ABUW_0769 PF04607 Region found in RelA / SpoT proteins ABUW_0774 PF10045 ABUW_0774 ABUW_0776 PF13264 ABUW_0776 ABUW_0777 PF04233 ABUW_0777 ABUW_0780 PF13876 ABUW_0780 ABUW_0783 PF12949 HeH/LEM domain ABUW_0787 PF13554 Bacteriophage related domain of unknown function ABUW_0793 PF14076 ABUW_0793 ABUW_0794 PF12844 Helix-turn-helix domain ABUW_0796 PF14020 ABUW_0796 ABUW_0799 PF03869 Arc-like DNA binding domain ABUW_0800 PF03869 Arc-like DNA binding domain ABUW_0801 PF04383 KilA-N domain ABUW_0806 PF08875 ABUW_0806 ABUW_0810 PF05838 Glycosyl hydrolase 108 ABUW_0810 PF09374 Predicted Peptidoglycan domain ABUW_0815 PF00589 Phage integrase family ABUW_0815 PF13356 Domain of unknown function (DUF4102) ABUW_0817 PF00324 Amino acid permease ABUW_0818 PF04303 PrpF protein ABUW_0819 PF00348 Polyprenyl synthetase ABUW_0820 PF04237 YjbR ABUW_0821 PF01145 SPFH domain / Band 7 family ABUW_0822 PF01957 NfeD-like C-terminal, partner-binding ABUW_0823 PF01734 Patatin-like phospholipase ABUW_0824 PF01553 Acyltransferase ABUW_0825 PF13000 ABUW_0825 ABUW_0826 PF02530 ABUW_0826 ABUW_0827 PF00884 Sulfatase ABUW_0827 PF08019 ABUW_0827 ABUW_0828 PF00072 Response regulator receiver domain ABUW_0828 PF00486 Transcriptional regulatory protein, C terminal ABUW_0829 PF00512 His Kinase A (phospho-acceptor) domain ABUW_0829 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_0830 PF01569 PAP2 superfamily ABUW_0831 PF00909 Ammonium Transporter Family ABUW_0832 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_0832 PF03466 LysR substrate binding domain ABUW_0833 PF03547 ABUW_0833 ABUW_0836 PF00133 tRNA synthetases class I (I, L, M and V) ABUW_0836 PF08264 Anticodon-binding domain of tRNA ABUW_0836 PF10458 Valyl tRNA synthetase tRNA binding arm ABUW_0838 PF00106 short chain dehydrogenase ABUW_0839 PF13577 SnoaL-like domain ABUW_0840 PF01906 Putative heavy-metal-binding ABUW_0841 PF01906 Putative heavy-metal-binding ABUW_0842 PF02321 Outer membrane efflux protein ABUW_0843 PF00873 AcrB/AcrD/AcrF family ABUW_0844 PF00529 HlyD family secretion protein ABUW_0844 PF16576 ABUW_0844 ABUW_0845 PF01569 PAP2 superfamily ABUW_0846 PF10136 ABUW_0846 ABUW_0847 PF00348 Polyprenyl synthetase ABUW_0848 PF00829 Ribosomal prokaryotic L21 protein ABUW_0849 PF01016 Ribosomal L27 protein ABUW_0850 PF03548 Outer membrane lipoprotein carrier protein LolA ABUW_0851 PF11738 Protein of unknown function (DUF3298) ABUW_0852 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABUW_0852 PF02403 Seryl-tRNA synthetase N-terminal domain ABUW_0853 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABUW_0853 PF10414 Sirohaem synthase dimerisation region ABUW_0853 PF13241 Putative NAD(P)-binding ABUW_0854 PF00588 SpoU rRNA Methylase family ABUW_0855 PF01638 HxlR-like helix-turn-helix ABUW_0856 PF12724 Flavodoxin domain ABUW_0857 PF00324 Amino acid permease ABUW_0858 PF00465 Iron-containing alcohol dehydrogenase ABUW_0860 PF03099 Biotin/lipoate A/B protein ligase family ABUW_0861 PF04359 Protein of unknown function (DUF493) ABUW_0862 PF00140 Sigma-70 factor, region 1 ABUW_0862 PF03979 Sigma-70 factor, region 1 ABUW_0862 PF04539 Sigma-70 region 3 ABUW_0862 PF04542 Sigma-70 region 2 ABUW_0862 PF04545 Sigma-70, region 4 ABUW_0862 PF04546 Sigma-70, non-essential region ABUW_0864 PF03695 Uncharacterised protein family (UPF0149) ABUW_0865 PF00581 Rhodanese-like domain ABUW_0866 PF06945 ABUW_0866 ABUW_0867 PF00285 Citrate synthase ABUW_0868 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABUW_0869 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABUW_0870 PF00890 FAD binding domain ABUW_0870 PF02910 Fumarate reductase flavoprotein C-term ABUW_0871 PF13085 2Fe-2S iron-sulfur cluster binding domain ABUW_0871 PF13534 4Fe-4S dicluster domain ABUW_0872 PF00676 Dehydrogenase E1 component ABUW_0872 PF02779 Transketolase, pyrimidine binding domain ABUW_0872 PF16078 ABUW_0872 ABUW_0872 PF16870 ABUW_0872 ABUW_0873 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABUW_0873 PF00364 Biotin-requiring enzyme ABUW_0873 PF02817 e3 binding domain ABUW_0874 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABUW_0874 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_0875 PF00549 CoA-ligase ABUW_0875 PF08442 ATP-grasp domain ABUW_0876 PF00549 CoA-ligase ABUW_0876 PF02629 CoA binding domain ABUW_0881 PF00579 tRNA synthetases class I (W and Y) ABUW_0882 PF05661 ABUW_0882 ABUW_0883 PF04228 ABUW_0883 ABUW_0884 PF00999 Sodium/hydrogen exchanger family ABUW_0887 PF09587 Bacterial capsule synthesis protein PGA_cap ABUW_0889 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABUW_0890 PF00582 Universal stress protein family ABUW_0891 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_0892 PF01272 Transcription elongation factor, GreA/GreB, C-term ABUW_0892 PF03449 Transcription elongation factor, N-terminal ABUW_0893 PF02142 MGS-like domain ABUW_0893 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABUW_0893 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABUW_0894 PF00117 Glutamine amidotransferase class-I ABUW_0894 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABUW_0897 PF01985 CRS1 / YhbY (CRM) domain ABUW_0898 PF01728 FtsJ-like methyltransferase ABUW_0899 PF00004 ATPase family associated with various cellular activities (AAA) ABUW_0899 PF01434 Peptidase family M41 ABUW_0899 PF06480 FtsH Extracellular ABUW_0900 PF00809 Pterin binding enzyme ABUW_0904 PF09423 PhoD-like phosphatase ABUW_0904 PF16655 ABUW_0904 ABUW_0907 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABUW_0907 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABUW_0908 PF06325 Ribosomal protein L11 methyltransferase (PrmA) ABUW_0910 PF00083 Sugar (and other) transporter ABUW_0911 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABUW_0911 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABUW_0912 PF01266 FAD dependent oxidoreductase ABUW_0912 PF16901 ABUW_0912 ABUW_0913 PF00821 Phosphoenolpyruvate carboxykinase ABUW_0913 PF17297 ABUW_0913 ABUW_0914 PF00781 Diacylglycerol kinase catalytic domain ABUW_0915 PF00149 Calcineurin-like phosphoesterase ABUW_0916 PF12245 Bacterial Ig-like domain (group 3) ABUW_0917 PF00166 Chaperonin 10 Kd subunit ABUW_0918 PF00118 TCP-1/cpn60 chaperonin family ABUW_0919 PF01219 Prokaryotic diacylglycerol kinase ABUW_0920 PF00753 Metallo-beta-lactamase superfamily ABUW_0921 PF03009 Glycerophosphoryl diester phosphodiesterase family ABUW_0922 PF00873 AcrB/AcrD/AcrF family ABUW_0923 PF13430 ABUW_0923 ABUW_0924 PF01435 Peptidase family M48 ABUW_0925 PF01464 Transglycosylase SLT domain ABUW_0926 PF01171 PP-loop family ABUW_0927 PF02036 SCP-2 sterol transfer family ABUW_0928 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABUW_0928 PF01464 Transglycosylase SLT domain ABUW_0929 PF01272 Transcription elongation factor, GreA/GreB, C-term ABUW_0929 PF03449 Transcription elongation factor, N-terminal ABUW_0931 PF14534 Domain of unknown function (DUF4440) ABUW_0932 PF00501 AMP-binding enzyme ABUW_0932 PF00550 Phosphopantetheine attachment site ABUW_0932 PF13193 AMP-binding enzyme C-terminal domain ABUW_0940 PF00881 Nitroreductase family ABUW_0941 PF00106 short chain dehydrogenase ABUW_0942 PF00440 Bacterial regulatory proteins, tetR family ABUW_0943 PF02595 Glycerate kinase family ABUW_0944 PF00384 Molybdopterin oxidoreductase ABUW_0944 PF01568 Molydopterin dinucleotide binding domain ABUW_0945 PF02634 FdhD/NarQ family ABUW_0946 PF06803 ABUW_0946 ABUW_0947 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABUW_0947 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABUW_0947 PF11890 Domain of unknown function (DUF3410) ABUW_0948 PF00152 tRNA synthetases class II (D, K and N) ABUW_0949 PF04280 Tim44-like domain ABUW_0950 PF06745 KaiC ABUW_0950 PF13541 Subunit ChlI of Mg-chelatase ABUW_0951 PF00324 Amino acid permease ABUW_0953 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABUW_0953 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABUW_0954 PF01678 Diaminopimelate epimerase ABUW_0955 PF00561 alpha/beta hydrolase fold ABUW_0956 PF01810 ABUW_0956 ABUW_0957 PF00589 Phage integrase family ABUW_0957 PF02899 Phage integrase, N-terminal SAM-like domain ABUW_0958 PF01012 Electron transfer flavoprotein domain ABUW_0959 PF00766 Electron transfer flavoprotein FAD-binding domain ABUW_0959 PF01012 Electron transfer flavoprotein domain ABUW_0960 PF00521 DNA gyrase/topoisomerase IV, subunit A ABUW_0960 PF03989 DNA gyrase C-terminal domain, beta-propeller ABUW_0961 PF13231 ABUW_0961 ABUW_0962 PF04138 ABUW_0962 ABUW_0963 PF00535 Glycosyl transferase family 2 ABUW_0964 PF04794 YdjC-like protein ABUW_0965 PF12698 ABC-2 family transporter protein ABUW_0966 PF12698 ABC-2 family transporter protein ABUW_0967 PF16576 ABUW_0967 ABUW_0968 PF02321 Outer membrane efflux protein ABUW_0969 PF00266 Aminotransferase class-V ABUW_0972 PF02639 ABUW_0972 ABUW_0973 PF00892 EamA-like transporter family ABUW_0974 PF02687 ABUW_0974 ABUW_0974 PF12704 MacB-like periplasmic core domain ABUW_0975 PF00005 ABC transporter ABUW_0976 PF00753 Metallo-beta-lactamase superfamily ABUW_0976 PF03772 ABUW_0976 ABUW_0976 PF13567 ABUW_0976 ABUW_0977 PF03279 ABUW_0977 ABUW_0978 PF01343 Peptidase family S49 ABUW_0979 PF12697 Alpha/beta hydrolase family ABUW_0980 PF00551 Formyl transferase ABUW_0981 PF00586 AIR synthase related protein, N-terminal domain ABUW_0981 PF02769 AIR synthase related protein, C-terminal domain ABUW_0982 PF01594 ABUW_0982 ABUW_0983 PF00308 Bacterial dnaA protein ABUW_0986 PF11304 ABUW_0986 ABUW_0988 PF04542 Sigma-70 region 2 ABUW_0988 PF08281 Sigma-70, region 4 ABUW_0989 PF00588 SpoU rRNA Methylase family ABUW_0990 PF00316 Fructose-1-6-bisphosphatase ABUW_0992 PF00691 OmpA family ABUW_0993 PF04052 TolB amino-terminal domain ABUW_0993 PF07676 WD40-like Beta Propeller Repeat ABUW_0994 PF13103 TonB C terminal ABUW_0995 PF02472 Biopolymer transport protein ExbD/TolR ABUW_0996 PF01618 ABUW_0996 ABUW_0997 PF03061 Thioesterase superfamily ABUW_0998 PF01546 Peptidase family M20/M25/M40 ABUW_0998 PF07687 Peptidase dimerisation domain ABUW_0999 PF05491 Holliday junction DNA helicase ruvB C-terminus ABUW_0999 PF05496 Holliday junction DNA helicase ruvB N-terminus ABUW_1000 PF01330 RuvA N terminal domain ABUW_1000 PF07499 RuvA, C-terminal domain ABUW_1000 PF14520 Helix-hairpin-helix domain ABUW_1001 PF01966 HD domain ABUW_1002 PF02769 AIR synthase related protein, C-terminal domain ABUW_1002 PF13507 CobB/CobQ-like glutamine amidotransferase domain ABUW_1003 PF07690 Major Facilitator Superfamily ABUW_1006 PF00378 Enoyl-CoA hydratase/isomerase family ABUW_1007 PF01467 Cytidylyltransferase ABUW_1008 PF00188 Cysteine-rich secretory protein family ABUW_1009 PF00578 AhpC/TSA family ABUW_1010 PF01902 ATP-binding region ABUW_1012 PF06508 Queuosine biosynthesis protein QueC ABUW_1013 PF04055 Radical SAM superfamily ABUW_1013 PF13394 4Fe-4S single cluster domain ABUW_1014 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_1014 PF14602 Hexapeptide repeat of succinyl-transferase ABUW_1014 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ABUW_1016 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1016 PF03466 LysR substrate binding domain ABUW_1017 PF00005 ABC transporter ABUW_1017 PF12857 ABUW_1017 ABUW_1018 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_1019 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_1020 PF06821 Serine hydrolase ABUW_1021 PF13531 Bacterial extracellular solute-binding protein ABUW_1022 PF01063 Aminotransferase class IV ABUW_1023 PF02618 YceG-like family ABUW_1024 PF02223 Thymidylate kinase ABUW_1025 PF03061 Thioesterase superfamily ABUW_1026 PF00890 FAD binding domain ABUW_1026 PF02910 Fumarate reductase flavoprotein C-term ABUW_1027 PF13180 PDZ domain ABUW_1027 PF13365 Trypsin-like peptidase domain ABUW_1028 PF13279 Thioesterase-like superfamily ABUW_1029 PF00009 Elongation factor Tu GTP binding domain ABUW_1029 PF00679 Elongation factor G C-terminus ABUW_1029 PF03144 Elongation factor Tu domain 2 ABUW_1029 PF06421 GTP-binding protein LepA C-terminus ABUW_1030 PF00717 Peptidase S24-like ABUW_1030 PF10502 Signal peptidase, peptidase S26 ABUW_1031 PF16137 ABUW_1031 ABUW_1032 PF00035 Double-stranded RNA binding motif ABUW_1032 PF14622 Ribonuclease-III-like ABUW_1033 PF01926 50S ribosome-binding GTPase ABUW_1033 PF07650 KH domain ABUW_1035 PF02565 Recombination protein O C terminal ABUW_1035 PF11967 Recombination protein O N terminal ABUW_1036 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ABUW_1037 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ABUW_1038 PF00106 short chain dehydrogenase ABUW_1041 PF03061 Thioesterase superfamily ABUW_1042 PF04828 Glutathione-dependent formaldehyde-activating enzyme ABUW_1043 PF00155 Aminotransferase class I and II ABUW_1045 PF00990 GGDEF domain ABUW_1045 PF13188 PAS domain ABUW_1047 PF00271 Helicase conserved C-terminal domain ABUW_1047 PF02151 UvrB/uvrC motif ABUW_1047 PF04851 Type III restriction enzyme, res subunit ABUW_1047 PF12344 Ultra-violet resistance protein B ABUW_1048 PF08212 Lipocalin-like domain ABUW_1049 PF00892 EamA-like transporter family ABUW_1050 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABUW_1050 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABUW_1053 PF01018 GTP1/OBG ABUW_1053 PF01926 50S ribosome-binding GTPase ABUW_1054 PF00696 Amino acid kinase family ABUW_1054 PF01472 PUA domain ABUW_1055 PF12710 haloacid dehalogenase-like hydrolase ABUW_1056 PF07759 ABUW_1056 ABUW_1057 PF01207 Dihydrouridine synthase (Dus) ABUW_1058 PF03060 Nitronate monooxygenase ABUW_1059 PF01988 ABUW_1059 ABUW_1061 PF02350 UDP-N-acetylglucosamine 2-epimerase ABUW_1064 PF13641 Glycosyltransferase like family 2 ABUW_1067 PF00875 DNA photolyase ABUW_1067 PF03441 FAD binding domain of DNA photolyase ABUW_1068 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABUW_1069 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_1070 PF00768 D-alanyl-D-alanine carboxypeptidase ABUW_1071 PF05299 M61 glycyl aminopeptidase ABUW_1072 PF03971 Monomeric isocitrate dehydrogenase ABUW_1073 PF00849 RNA pseudouridylate synthase ABUW_1074 PF00180 Isocitrate/isopropylmalate dehydrogenase ABUW_1078 PF06779 ABUW_1078 ABUW_1079 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1079 PF03466 LysR substrate binding domain ABUW_1080 PF00375 Sodium:dicarboxylate symporter family ABUW_1081 PF02567 Phenazine biosynthesis-like protein ABUW_1082 PF00675 Insulinase (Peptidase family M16) ABUW_1082 PF05193 Peptidase M16 inactive domain ABUW_1083 PF11342 Protein of unknown function (DUF3144) ABUW_1085 PF01928 CYTH domain ABUW_1085 PF05235 CHAD domain ABUW_1086 PF06127 ABUW_1086 ABUW_1087 PF01867 CRISPR associated protein Cas1 ABUW_1089 PF09611 ABUW_1089 ABUW_1090 PF09614 ABUW_1090 ABUW_1091 PF09615 ABUW_1091 ABUW_1092 PF09618 CRISPR-associated protein (Cas_Csy4) ABUW_1097 PF02581 Thiamine monophosphate synthase/TENI ABUW_1098 PF00202 Aminotransferase class-III ABUW_1100 PF00849 RNA pseudouridylate synthase ABUW_1101 PF00176 SNF2 family N-terminal domain ABUW_1101 PF00271 Helicase conserved C-terminal domain ABUW_1101 PF12137 RNA polymerase recycling family C-terminal ABUW_1102 PF01594 ABUW_1102 ABUW_1103 PF00440 Bacterial regulatory proteins, tetR family ABUW_1104 PF00175 Oxidoreductase NAD-binding domain ABUW_1104 PF00970 Oxidoreductase FAD-binding domain ABUW_1105 PF00487 ABUW_1105 ABUW_1106 PF14539 Domain of unknown function (DUF4442) ABUW_1107 PF00440 Bacterial regulatory proteins, tetR family ABUW_1108 PF04402 Protein of unknown function (DUF541) ABUW_1109 PF00202 Aminotransferase class-III ABUW_1110 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABUW_1111 PF00171 Aldehyde dehydrogenase family ABUW_1112 PF01037 AsnC family ABUW_1112 PF13404 AsnC-type helix-turn-helix domain ABUW_1113 PF00205 Thiamine pyrophosphate enzyme, central domain ABUW_1113 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABUW_1113 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABUW_1114 PF00324 Amino acid permease ABUW_1115 PF12849 PBP superfamily domain ABUW_1116 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_1116 PF12501 ABUW_1116 ABUW_1117 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_1117 PF11812 ABUW_1117 ABUW_1118 PF00005 ABC transporter ABUW_1119 PF01343 Peptidase family S49 ABUW_1119 PF08496 ABUW_1119 ABUW_1121 PF09997 ABUW_1121 ABUW_1122 PF00206 Lyase ABUW_1122 PF08328 Adenylosuccinate lyase C-terminal ABUW_1123 PF04356 Protein of unknown function (DUF489) ABUW_1124 PF03054 tRNA methyl transferase ABUW_1125 PF00293 NUDIX domain ABUW_1126 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_1127 PF00768 D-alanyl-D-alanine carboxypeptidase ABUW_1127 PF07943 Penicillin-binding protein 5, C-terminal domain ABUW_1130 PF01975 Survival protein SurE ABUW_1131 PF01476 LysM domain ABUW_1131 PF01551 Peptidase family M23 ABUW_1132 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1132 PF03466 LysR substrate binding domain ABUW_1133 PF05362 Lon protease (S16) C-terminal proteolytic domain ABUW_1133 PF13654 AAA domain ABUW_1134 PF07690 Major Facilitator Superfamily ABUW_1135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABUW_1136 PF13593 SBF-like CPA transporter family (DUF4137) ABUW_1137 PF01197 Ribosomal protein L31 ABUW_1138 PF00563 EAL domain ABUW_1140 PF04055 Radical SAM superfamily ABUW_1140 PF13394 4Fe-4S single cluster domain ABUW_1141 PF01132 Elongation factor P (EF-P) OB domain ABUW_1141 PF08207 Elongation factor P (EF-P) KOW-like domain ABUW_1141 PF09285 Elongation factor P, C-terminal ABUW_1142 PF02554 ABUW_1142 ABUW_1142 PF13722 ABUW_1142 ABUW_1143 PF04328 ABUW_1143 ABUW_1145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1145 PF03466 LysR substrate binding domain ABUW_1146 PF00557 Metallopeptidase family M24 ABUW_1146 PF01321 Creatinase/Prolidase N-terminal domain ABUW_1147 PF02028 BCCT family transporter ABUW_1148 PF02028 BCCT family transporter ABUW_1149 PF00355 Rieske [2Fe-2S] domain ABUW_1149 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABUW_1150 PF00171 Aldehyde dehydrogenase family ABUW_1151 PF00301 Rubredoxin ABUW_1151 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_1152 PF01266 FAD dependent oxidoreductase ABUW_1153 PF06249 Ethanolamine utilisation protein EutQ ABUW_1155 PF01914 ABUW_1155 ABUW_1156 PF00892 EamA-like transporter family ABUW_1157 PF00892 EamA-like transporter family ABUW_1158 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ABUW_1159 PF00440 Bacterial regulatory proteins, tetR family ABUW_1163 PF00440 Bacterial regulatory proteins, tetR family ABUW_1165 PF02678 Pirin ABUW_1166 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_1167 PF08348 ABUW_1167 ABUW_1167 PF13309 ABUW_1167 ABUW_1168 PF04954 Siderophore-interacting protein ABUW_1168 PF08021 Siderophore-interacting FAD-binding domain ABUW_1169 PF00501 AMP-binding enzyme ABUW_1169 PF13193 AMP-binding enzyme C-terminal domain ABUW_1170 PF00550 Phosphopantetheine attachment site ABUW_1170 PF00668 Condensation domain ABUW_1173 PF01032 FecCD transport family ABUW_1174 PF01032 FecCD transport family ABUW_1175 PF00005 ABC transporter ABUW_1176 PF01497 Periplasmic binding protein ABUW_1177 PF07715 TonB-dependent Receptor Plug Domain ABUW_1178 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABUW_1179 PF00668 Condensation domain ABUW_1180 PF00501 AMP-binding enzyme ABUW_1180 PF13193 AMP-binding enzyme C-terminal domain ABUW_1181 PF00550 Phosphopantetheine attachment site ABUW_1181 PF00857 Isochorismatase family ABUW_1182 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABUW_1184 PF00005 ABC transporter ABUW_1184 PF00664 ABC transporter transmembrane region ABUW_1185 PF00005 ABC transporter ABUW_1185 PF00664 ABC transporter transmembrane region ABUW_1186 PF00975 Thioesterase domain ABUW_1187 PF01648 4'-phosphopantetheinyl transferase superfamily ABUW_1188 PF00425 chorismate binding enzyme ABUW_1189 PF01471 Putative peptidoglycan binding domain ABUW_1189 PF03734 L,D-transpeptidase catalytic domain ABUW_1190 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABUW_1191 PF05675 ABUW_1191 ABUW_1192 PF11220 ABUW_1192 ABUW_1193 PF13387 ABUW_1193 ABUW_1194 PF00144 Beta-lactamase ABUW_1195 PF01227 GTP cyclohydrolase I ABUW_1196 PF00941 FAD binding domain in molybdopterin dehydrogenase ABUW_1196 PF01799 [2Fe-2S] binding domain ABUW_1196 PF03450 CO dehydrogenase flavoprotein C-terminal domain ABUW_1197 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABUW_1197 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ABUW_1198 PF02625 XdhC and CoxI family ABUW_1198 PF13478 XdhC Rossmann domain ABUW_1199 PF01713 Smr domain ABUW_1200 PF00218 Indole-3-glycerol phosphate synthase ABUW_1201 PF00591 Glycosyl transferase family, a/b domain ABUW_1201 PF02885 Glycosyl transferase family, helical bundle domain ABUW_1202 PF00593 TonB dependent receptor ABUW_1202 PF07715 TonB-dependent Receptor Plug Domain ABUW_1203 PF01433 Peptidase family M1 ABUW_1203 PF11838 ERAP1-like C-terminal domain ABUW_1204 PF00117 Glutamine amidotransferase class-I ABUW_1205 PF00557 Metallopeptidase family M24 ABUW_1205 PF01321 Creatinase/Prolidase N-terminal domain ABUW_1205 PF16188 ABUW_1205 ABUW_1205 PF16189 ABUW_1205 ABUW_1206 PF00854 POT family ABUW_1207 PF00120 Glutamine synthetase, catalytic domain ABUW_1207 PF03951 Glutamine synthetase, beta-Grasp domain ABUW_1208 PF04345 Chorismate lyase ABUW_1209 PF01040 UbiA prenyltransferase family ABUW_1210 PF03583 Secretory lipase ABUW_1212 PF10881 ABUW_1212 ABUW_1216 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABUW_1216 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABUW_1217 PF01784 NIF3 (NGG1p interacting factor 3) ABUW_1218 PF13180 PDZ domain ABUW_1218 PF13365 Trypsin-like peptidase domain ABUW_1219 PF01743 Poly A polymerase head domain ABUW_1219 PF12627 Probable RNA and SrmB- binding site of polymerase A ABUW_1220 PF00390 Malic enzyme, N-terminal domain ABUW_1220 PF01515 Phosphate acetyl/butaryl transferase ABUW_1220 PF03949 Malic enzyme, NAD binding domain ABUW_1221 PF00563 EAL domain ABUW_1221 PF00989 PAS fold ABUW_1221 PF00990 GGDEF domain ABUW_1221 PF08447 PAS fold ABUW_1222 PF04452 RNA methyltransferase ABUW_1223 PF02219 Methylenetetrahydrofolate reductase ABUW_1224 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ABUW_1224 PF05221 S-adenosyl-L-homocysteine hydrolase ABUW_1225 PF03412 Peptidase C39 family ABUW_1226 PF02627 Carboxymuconolactone decarboxylase family ABUW_1227 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_1227 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_1227 PF09317 ABUW_1227 ABUW_1228 PF04055 Radical SAM superfamily ABUW_1228 PF16881 ABUW_1228 ABUW_1229 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABUW_1229 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_1231 PF07690 Major Facilitator Superfamily ABUW_1232 PF07690 Major Facilitator Superfamily ABUW_1233 PF03922 OmpW family ABUW_1234 PF00557 Metallopeptidase family M24 ABUW_1235 PF00318 Ribosomal protein S2 ABUW_1236 PF00889 Elongation factor TS ABUW_1237 PF11948 ABUW_1237 ABUW_1238 PF02311 AraC-like ligand binding domain ABUW_1238 PF12833 Helix-turn-helix domain ABUW_1239 PF03591 ABUW_1239 ABUW_1240 PF05437 ABUW_1240 ABUW_1241 PF06127 ABUW_1241 ABUW_1242 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel ABUW_1243 PF13406 Transglycosylase SLT domain ABUW_1244 PF01098 ABUW_1244 ABUW_1246 PF14489 QueF-like protein ABUW_1246 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ABUW_1247 PF01061 ABUW_1247 ABUW_1248 PF00005 ABC transporter ABUW_1249 PF00589 Phage integrase family ABUW_1257 PF12684 PDDEXK-like domain of unknown function (DUF3799) ABUW_1265 PF00717 Peptidase S24-like ABUW_1265 PF01381 Helix-turn-helix ABUW_1270 PF04492 ABUW_1270 ABUW_1271 PF00772 DnaB-like helicase N terminal domain ABUW_1271 PF03796 DnaB-like helicase C terminal domain ABUW_1280 PF04480 Protein of unknown function (DUF559) ABUW_1291 PF10045 ABUW_1291 ABUW_1292 PF17289 ABUW_1292 ABUW_1293 PF13264 ABUW_1293 ABUW_1294 PF04233 ABUW_1294 ABUW_1300 PF10281 ABUW_1300 ABUW_1305 PF13554 Bacteriophage related domain of unknown function ABUW_1311 PF12686 ABUW_1311 ABUW_1312 PF10543 ABUW_1312 ABUW_1314 PF14730 Domain of unknown function (DUF4468) with TBP-like fold ABUW_1316 PF06120 ABUW_1316 ABUW_1321 PF08875 ABUW_1321 ABUW_1326 PF00959 Phage lysozyme ABUW_1327 PF15956 ABUW_1327 ABUW_1331 PF12843 ABUW_1331 ABUW_1332 PF03583 Secretory lipase ABUW_1333 PF00464 Serine hydroxymethyltransferase ABUW_1334 PF02321 Outer membrane efflux protein ABUW_1335 PF00873 AcrB/AcrD/AcrF family ABUW_1336 PF16576 ABUW_1336 ABUW_1338 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1338 PF03466 LysR substrate binding domain ABUW_1339 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABUW_1340 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_1341 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_1343 PF00893 Small Multidrug Resistance protein ABUW_1345 PF01136 ABUW_1345 ABUW_1345 PF16325 ABUW_1345 ABUW_1346 PF00155 Aminotransferase class I and II ABUW_1346 PF00392 Bacterial regulatory proteins, gntR family ABUW_1347 PF02567 Phenazine biosynthesis-like protein ABUW_1348 PF00175 Oxidoreductase NAD-binding domain ABUW_1348 PF00970 Oxidoreductase FAD-binding domain ABUW_1349 PF01980 Uncharacterised protein family UPF0066 ABUW_1350 PF02308 ABUW_1350 ABUW_1350 PF13194 ABUW_1350 ABUW_1351 PF00437 Type II/IV secretion system protein ABUW_1351 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ABUW_1352 PF04076 Bacterial OB fold (BOF) protein ABUW_1353 PF00072 Response regulator receiver domain ABUW_1353 PF00486 Transcriptional regulatory protein, C terminal ABUW_1354 PF00512 His Kinase A (phospho-acceptor) domain ABUW_1354 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_1355 PF10636 Hemin uptake protein hemP ABUW_1356 PF00293 NUDIX domain ABUW_1356 PF02581 Thiamine monophosphate synthase/TENI ABUW_1358 PF00905 Penicillin binding protein transpeptidase domain ABUW_1358 PF00912 Transglycosylase ABUW_1358 PF14814 Bifunctional transglycosylase second domain ABUW_1359 PF01513 ATP-NAD kinase ABUW_1360 PF07023 ABUW_1360 ABUW_1361 PF00591 Glycosyl transferase family, a/b domain ABUW_1361 PF02885 Glycosyl transferase family, helical bundle domain ABUW_1362 PF00375 Sodium:dicarboxylate symporter family ABUW_1363 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_1363 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_1363 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_1364 PF00756 Putative esterase ABUW_1365 PF00800 Prephenate dehydratase ABUW_1365 PF01817 Chorismate mutase type II ABUW_1365 PF01842 ACT domain ABUW_1366 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABUW_1366 PF02153 Prephenate dehydrogenase ABUW_1368 PF01546 Peptidase family M20/M25/M40 ABUW_1368 PF07687 Peptidase dimerisation domain ABUW_1369 PF00753 Metallo-beta-lactamase superfamily ABUW_1371 PF03883 ABUW_1371 ABUW_1372 PF05690 Thiazole biosynthesis protein ThiG ABUW_1373 PF02597 ThiS family ABUW_1374 PF04241 ABUW_1374 ABUW_1375 PF00140 Sigma-70 factor, region 1 ABUW_1375 PF04542 Sigma-70 region 2 ABUW_1375 PF04545 Sigma-70, region 4 ABUW_1376 PF01206 Sulfurtransferase TusA ABUW_1377 PF00313 'Cold-shock' DNA-binding domain ABUW_1378 PF00270 DEAD/DEAH box helicase ABUW_1378 PF00271 Helicase conserved C-terminal domain ABUW_1380 PF00881 Nitroreductase family ABUW_1381 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABUW_1381 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABUW_1382 PF00300 Histidine phosphatase superfamily (branch 1) ABUW_1383 PF00589 Phage integrase family ABUW_1385 PF00872 ABUW_1385 ABUW_1391 PF09588 YqaJ-like viral recombinase domain ABUW_1392 PF03837 ABUW_1392 ABUW_1400 PF00717 Peptidase S24-like ABUW_1400 PF01381 Helix-turn-helix ABUW_1401 PF14549 DNA-binding transcriptional regulator Cro ABUW_1402 PF01402 Ribbon-helix-helix protein, copG family ABUW_1420 PF12236 Bacteriophage head to tail connecting protein ABUW_1427 PF00583 Acetyltransferase (GNAT) family ABUW_1438 PF01757 ABUW_1438 ABUW_1440 PF05838 Glycosyl hydrolase 108 ABUW_1440 PF09374 Predicted Peptidoglycan domain ABUW_1442 PF05134 Type II secretion system (T2SS), protein L ABUW_1442 PF12693 GspL periplasmic domain ABUW_1443 PF04612 Type II secretion system (T2SS), protein M ABUW_1444 PF01180 Dihydroorotate dehydrogenase ABUW_1445 PF02674 ABUW_1445 ABUW_1446 PF00156 Phosphoribosyl transferase domain ABUW_1446 PF13522 Glutamine amidotransferase domain ABUW_1447 PF01435 Peptidase family M48 ABUW_1449 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABUW_1449 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABUW_1450 PF01435 Peptidase family M48 ABUW_1451 PF09424 Yqey-like protein ABUW_1452 PF01165 Ribosomal protein S21 ABUW_1453 PF00814 Glycoprotease family ABUW_1455 PF05673 Protein of unknown function (DUF815) ABUW_1456 PF01734 Patatin-like phospholipase ABUW_1456 PF11815 ABUW_1456 ABUW_1457 PF00069 Protein kinase domain ABUW_1462 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1462 PF03466 LysR substrate binding domain ABUW_1463 PF00202 Aminotransferase class-III ABUW_1464 PF00171 Aldehyde dehydrogenase family ABUW_1465 PF00324 Amino acid permease ABUW_1466 PF09939 ABUW_1466 ABUW_1468 PF02585 GlcNAc-PI de-N-acetylase ABUW_1469 PF05401 Nodulation protein S (NodS) ABUW_1470 PF00535 Glycosyl transferase family 2 ABUW_1471 PF04076 Bacterial OB fold (BOF) protein ABUW_1472 PF04940 Sensors of blue-light using FAD ABUW_1474 PF01810 ABUW_1474 ABUW_1475 PF02311 AraC-like ligand binding domain ABUW_1475 PF12833 Helix-turn-helix domain ABUW_1476 PF00561 alpha/beta hydrolase fold ABUW_1477 PF03616 ABUW_1477 ABUW_1478 PF04199 Putative cyclase ABUW_1479 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1479 PF03466 LysR substrate binding domain ABUW_1480 PF00248 Aldo/keto reductase family ABUW_1481 PF13561 Enoyl-(Acyl carrier protein) reductase ABUW_1482 PF10604 Polyketide cyclase / dehydrase and lipid transport ABUW_1483 PF05673 Protein of unknown function (DUF815) ABUW_1484 PF00392 Bacterial regulatory proteins, gntR family ABUW_1484 PF07729 FCD domain ABUW_1486 PF00440 Bacterial regulatory proteins, tetR family ABUW_1487 PF05229 ABUW_1487 ABUW_1488 PF05229 ABUW_1488 ABUW_1489 PF05229 ABUW_1489 ABUW_1490 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABUW_1491 PF00577 Outer membrane usher protein ABUW_1491 PF13953 PapC C-terminal domain ABUW_1492 PF05229 ABUW_1492 ABUW_1493 PF15428 ABUW_1493 ABUW_1496 PF00083 Sugar (and other) transporter ABUW_1496 PF08946 Osmosensory transporter coiled coil ABUW_1498 PF00440 Bacterial regulatory proteins, tetR family ABUW_1499 PF00892 EamA-like transporter family ABUW_1500 PF04403 ABUW_1500 ABUW_1501 PF04403 ABUW_1501 ABUW_1502 PF02470 ABUW_1502 ABUW_1503 PF03886 Protein of unknown function (DUF330) ABUW_1504 PF00576 HIUase/Transthyretin family ABUW_1505 PF03928 Domain of unknown function (DUF336) ABUW_1506 PF00072 Response regulator receiver domain ABUW_1506 PF00486 Transcriptional regulatory protein, C terminal ABUW_1507 PF00512 His Kinase A (phospho-acceptor) domain ABUW_1507 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_1508 PF08212 Lipocalin-like domain ABUW_1509 PF00487 ABUW_1509 ABUW_1510 PF13450 NAD(P)-binding Rossmann-like domain ABUW_1511 PF07103 ABUW_1511 ABUW_1512 PF02353 Mycolic acid cyclopropane synthetase ABUW_1514 PF00512 His Kinase A (phospho-acceptor) domain ABUW_1514 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_1515 PF00072 Response regulator receiver domain ABUW_1515 PF00486 Transcriptional regulatory protein, C terminal ABUW_1516 PF16036 ABUW_1516 ABUW_1518 PF13302 Acetyltransferase (GNAT) domain ABUW_1519 PF01177 Asp/Glu/Hydantoin racemase ABUW_1520 PF00892 EamA-like transporter family ABUW_1521 PF07995 Glucose / Sorbosone dehydrogenase ABUW_1522 PF13673 Acetyltransferase (GNAT) domain ABUW_1523 PF07690 Major Facilitator Superfamily ABUW_1524 PF00440 Bacterial regulatory proteins, tetR family ABUW_1524 PF16859 ABUW_1524 ABUW_1525 PF00375 Sodium:dicarboxylate symporter family ABUW_1527 PF00753 Metallo-beta-lactamase superfamily ABUW_1527 PF16123 ABUW_1527 ABUW_1528 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_1529 PF00005 ABC transporter ABUW_1529 PF09383 NIL domain ABUW_1530 PF03180 NLPA lipoprotein ABUW_1531 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABUW_1531 PF02843 Phosphoribosylglycinamide synthetase, C domain ABUW_1531 PF02844 Phosphoribosylglycinamide synthetase, N domain ABUW_1532 PF01808 AICARFT/IMPCHase bienzyme ABUW_1532 PF02142 MGS-like domain ABUW_1533 PF02954 Bacterial regulatory protein, Fis family ABUW_1534 PF11906 ABUW_1534 ABUW_1535 PF06325 Ribosomal protein L11 methyltransferase (PrmA) ABUW_1537 PF01134 Glucose inhibited division protein A ABUW_1537 PF13932 GidA associated domain 3 ABUW_1539 PF13280 ABUW_1539 ABUW_1540 PF14403 ABUW_1540 ABUW_1541 PF04168 ABUW_1541 ABUW_1542 PF01841 Transglutaminase-like superfamily ABUW_1542 PF08379 ABUW_1542 ABUW_1543 PF00227 Proteasome subunit ABUW_1544 PF00842 Alanine racemase, C-terminal domain ABUW_1544 PF01168 Alanine racemase, N-terminal domain ABUW_1545 PF00772 DnaB-like helicase N terminal domain ABUW_1545 PF03796 DnaB-like helicase C terminal domain ABUW_1546 PF01281 Ribosomal protein L9, N-terminal domain ABUW_1546 PF03948 Ribosomal protein L9, C-terminal domain ABUW_1547 PF01084 Ribosomal protein S18 ABUW_1548 PF01250 Ribosomal protein S6 ABUW_1549 PF01040 UbiA prenyltransferase family ABUW_1550 PF03626 ABUW_1550 ABUW_1551 PF00510 Cytochrome c oxidase subunit III ABUW_1552 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABUW_1553 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABUW_1553 PF06481 COX Aromatic Rich Motif ABUW_1554 PF06271 ABUW_1554 ABUW_1554 PF14237 ABUW_1554 ABUW_1555 PF00391 PEP-utilising enzyme, mobile domain ABUW_1555 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ABUW_1555 PF02896 PEP-utilising enzyme, TIM barrel domain ABUW_1556 PF03618 ABUW_1556 ABUW_1558 PF01522 Polysaccharide deacetylase ABUW_1558 PF14883 Hypothetical glycosyl hydrolase family 13 ABUW_1559 PF13641 Glycosyltransferase like family 2 ABUW_1560 PF13994 ABUW_1560 ABUW_1562 PF00296 Luciferase-like monooxygenase ABUW_1565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1565 PF03466 LysR substrate binding domain ABUW_1566 PF17124 ABUW_1566 ABUW_1567 PF00472 RF-1 domain ABUW_1567 PF03462 PCRF domain ABUW_1568 PF05175 Methyltransferase small domain ABUW_1569 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_1570 PF09084 NMT1/THI5 like ABUW_1571 PF12625 ABUW_1571 ABUW_1571 PF12833 Helix-turn-helix domain ABUW_1572 PF00106 short chain dehydrogenase ABUW_1573 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_1573 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_1573 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_1574 PF00501 AMP-binding enzyme ABUW_1574 PF13193 AMP-binding enzyme C-terminal domain ABUW_1575 PF01613 Flavin reductase like domain ABUW_1576 PF00899 ThiF family ABUW_1577 PF03109 ABUW_1577 ABUW_1578 PF02152 Dihydroneopterin aldolase ABUW_1579 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABUW_1581 PF03814 ABUW_1581 ABUW_1582 PF00122 E1-E2 ATPase ABUW_1582 PF00702 haloacid dehalogenase-like hydrolase ABUW_1583 PF02669 ABUW_1583 ABUW_1584 PF00512 His Kinase A (phospho-acceptor) domain ABUW_1584 PF00582 Universal stress protein family ABUW_1584 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_1584 PF02702 Osmosensitive K+ channel His kinase sensor domain ABUW_1584 PF13493 Domain of unknown function (DUF4118) ABUW_1585 PF00072 Response regulator receiver domain ABUW_1585 PF00486 Transcriptional regulatory protein, C terminal ABUW_1586 PF00120 Glutamine synthetase, catalytic domain ABUW_1587 PF10973 ABUW_1587 ABUW_1588 PF03232 ABUW_1588 ABUW_1589 PF07690 Major Facilitator Superfamily ABUW_1590 PF01103 Surface antigen ABUW_1590 PF07244 Surface antigen variable number repeat ABUW_1590 PF17243 ABUW_1590 ABUW_1591 PF04357 ABUW_1591 ABUW_1593 PF00330 Aconitase family (aconitate hydratase) ABUW_1593 PF06434 Aconitate hydratase 2 N-terminus ABUW_1593 PF11791 Aconitate B N-terminal domain ABUW_1595 PF00520 Ion transport protein ABUW_1596 PF07690 Major Facilitator Superfamily ABUW_1598 PF10670 ABUW_1598 ABUW_1599 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1599 PF03466 LysR substrate binding domain ABUW_1600 PF04284 ABUW_1600 ABUW_1602 PF00849 RNA pseudouridylate synthase ABUW_1602 PF01479 S4 domain ABUW_1603 PF00583 Acetyltransferase (GNAT) family ABUW_1604 PF04221 RelB antitoxin ABUW_1605 PF00849 RNA pseudouridylate synthase ABUW_1606 PF02367 Uncharacterised P-loop hydrolase UPF0079 ABUW_1607 PF01119 DNA mismatch repair protein, C-terminal domain ABUW_1607 PF08676 MutL C terminal dimerisation domain ABUW_1607 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_1608 PF01715 IPP transferase ABUW_1609 PF17209 ABUW_1609 ABUW_1610 PF00892 EamA-like transporter family ABUW_1611 PF00881 Nitroreductase family ABUW_1613 PF00149 Calcineurin-like phosphoesterase ABUW_1614 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABUW_1615 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABUW_1615 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ABUW_1617 PF00117 Glutamine amidotransferase class-I ABUW_1618 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ABUW_1619 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ABUW_1620 PF13520 Amino acid permease ABUW_1621 PF00171 Aldehyde dehydrogenase family ABUW_1623 PF12146 Putative lysophospholipase ABUW_1624 PF00465 Iron-containing alcohol dehydrogenase ABUW_1625 PF05970 ABUW_1625 ABUW_1625 PF14493 ABUW_1625 ABUW_1626 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase ABUW_1627 PF02110 Hydroxyethylthiazole kinase family ABUW_1630 PF01433 Peptidase family M1 ABUW_1630 PF11940 Domain of unknown function (DUF3458) ABUW_1630 PF17432 ABUW_1630 ABUW_1631 PF05229 ABUW_1631 ABUW_1632 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABUW_1633 PF00577 Outer membrane usher protein ABUW_1633 PF13953 PapC C-terminal domain ABUW_1634 PF05229 ABUW_1634 ABUW_1635 PF13417 Glutathione S-transferase, N-terminal domain ABUW_1635 PF14497 Glutathione S-transferase, C-terminal domain ABUW_1636 PF00106 short chain dehydrogenase ABUW_1637 PF00106 short chain dehydrogenase ABUW_1638 PF01817 Chorismate mutase type II ABUW_1639 PF01037 AsnC family ABUW_1639 PF13412 Winged helix-turn-helix DNA-binding ABUW_1645 PF00440 Bacterial regulatory proteins, tetR family ABUW_1646 PF00593 TonB dependent receptor ABUW_1646 PF07715 TonB-dependent Receptor Plug Domain ABUW_1648 PF00924 Mechanosensitive ion channel ABUW_1654 PF13527 Acetyltransferase (GNAT) domain ABUW_1655 PF00593 TonB dependent receptor ABUW_1655 PF07715 TonB-dependent Receptor Plug Domain ABUW_1656 PF03922 OmpW family ABUW_1660 PF00005 ABC transporter ABUW_1661 PF00582 Universal stress protein family ABUW_1664 PF06271 ABUW_1664 ABUW_1666 PF00122 E1-E2 ATPase ABUW_1666 PF00690 Cation transporter/ATPase, N-terminus ABUW_1666 PF00702 haloacid dehalogenase-like hydrolase ABUW_1668 PF03594 ABUW_1668 ABUW_1669 PF01037 AsnC family ABUW_1669 PF13412 Winged helix-turn-helix DNA-binding ABUW_1670 PF01810 ABUW_1670 ABUW_1671 PF00923 Transaldolase ABUW_1672 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1672 PF03466 LysR substrate binding domain ABUW_1673 PF05232 ABUW_1673 ABUW_1674 PF00108 Thiolase, N-terminal domain ABUW_1674 PF02803 Thiolase, C-terminal domain ABUW_1675 PF13561 Enoyl-(Acyl carrier protein) reductase ABUW_1676 PF01575 MaoC like domain ABUW_1677 PF00144 Beta-lactamase ABUW_1678 PF00440 Bacterial regulatory proteins, tetR family ABUW_1679 PF07690 Major Facilitator Superfamily ABUW_1680 PF12169 DNA polymerase III subunits gamma and tau domain III ABUW_1680 PF13177 DNA polymerase III, delta subunit ABUW_1682 PF04185 Phosphoesterase family ABUW_1682 PF05506 ABUW_1682 ABUW_1683 PF13279 Thioesterase-like superfamily ABUW_1684 PF00465 Iron-containing alcohol dehydrogenase ABUW_1685 PF10282 Lactonase, 7-bladed beta-propeller ABUW_1686 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABUW_1687 PF01565 FAD binding domain ABUW_1687 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABUW_1688 PF02698 DUF218 domain ABUW_1689 PF12146 Putative lysophospholipase ABUW_1690 PF01645 Conserved region in glutamate synthase ABUW_1691 PF03929 ABUW_1691 ABUW_1692 PF00440 Bacterial regulatory proteins, tetR family ABUW_1693 PF14518 Iron-containing redox enzyme ABUW_1694 PF12832 MFS_1 like family ABUW_1696 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ABUW_1696 PF02785 Biotin carboxylase C-terminal domain ABUW_1696 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABUW_1697 PF00364 Biotin-requiring enzyme ABUW_1698 PF01220 Dehydroquinase class II ABUW_1699 PF00817 impB/mucB/samB family ABUW_1699 PF11799 impB/mucB/samB family C-terminal domain ABUW_1699 PF13438 ABUW_1699 ABUW_1701 PF13379 NMT1-like family ABUW_1702 PF00072 Response regulator receiver domain ABUW_1702 PF03861 ANTAR domain ABUW_1704 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABUW_1704 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABUW_1704 PF04324 BFD-like [2Fe-2S] binding domain ABUW_1704 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_1705 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_1705 PF13806 Rieske-like [2Fe-2S] domain ABUW_1706 PF00384 Molybdopterin oxidoreductase ABUW_1706 PF01568 Molydopterin dinucleotide binding domain ABUW_1706 PF04324 BFD-like [2Fe-2S] binding domain ABUW_1706 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABUW_1707 PF12804 MobA-like NTP transferase domain ABUW_1708 PF00384 Molybdopterin oxidoreductase ABUW_1708 PF01568 Molydopterin dinucleotide binding domain ABUW_1708 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABUW_1709 PF04055 Radical SAM superfamily ABUW_1709 PF06463 Molybdenum Cofactor Synthesis C ABUW_1709 PF13353 4Fe-4S single cluster domain ABUW_1710 PF02597 ThiS family ABUW_1711 PF02391 MoaE protein ABUW_1712 PF00994 Probable molybdopterin binding domain ABUW_1712 PF01967 MoaC family ABUW_1713 PF00994 Probable molybdopterin binding domain ABUW_1713 PF03453 MoeA N-terminal region (domain I and II) ABUW_1713 PF03454 MoeA C-terminal region (domain IV) ABUW_1714 PF01638 HxlR-like helix-turn-helix ABUW_1715 PF00155 Aminotransferase class I and II ABUW_1715 PF00392 Bacterial regulatory proteins, gntR family ABUW_1716 PF00892 EamA-like transporter family ABUW_1717 PF04358 DsrC like protein ABUW_1720 PF02635 DsrE/DsrF-like family ABUW_1721 PF01370 NAD dependent epimerase/dehydratase family ABUW_1722 PF00206 Lyase ABUW_1722 PF10415 Fumarase C C-terminus ABUW_1726 PF01266 FAD dependent oxidoreductase ABUW_1728 PF02542 YgbB family ABUW_1730 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABUW_1730 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABUW_1731 PF00440 Bacterial regulatory proteins, tetR family ABUW_1732 PF00072 Response regulator receiver domain ABUW_1732 PF00158 Sigma-54 interaction domain ABUW_1732 PF02954 Bacterial regulatory protein, Fis family ABUW_1733 PF00512 His Kinase A (phospho-acceptor) domain ABUW_1733 PF00989 PAS fold ABUW_1733 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_1734 PF00919 Uncharacterized protein family UPF0004 ABUW_1734 PF04055 Radical SAM superfamily ABUW_1735 PF00696 Amino acid kinase family ABUW_1736 PF01765 Ribosome recycling factor ABUW_1737 PF01255 Putative undecaprenyl diphosphate synthase ABUW_1738 PF01148 Cytidylyltransferase family ABUW_1739 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABUW_1739 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal ABUW_1739 PF13288 DXP reductoisomerase C-terminal domain ABUW_1740 PF00595 PDZ domain (Also known as DHR or GLGF) ABUW_1740 PF02163 Peptidase family M50 ABUW_1740 PF13180 PDZ domain ABUW_1741 PF01103 Surface antigen ABUW_1741 PF07244 Surface antigen variable number repeat ABUW_1742 PF03938 Outer membrane protein (OmpH-like) ABUW_1743 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_1743 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ABUW_1743 PF14602 Hexapeptide repeat of succinyl-transferase ABUW_1744 PF07977 FabA-like domain ABUW_1745 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_1745 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ABUW_1746 PF13174 Tetratricopeptide repeat ABUW_1746 PF16331 ABUW_1746 ABUW_1747 PF02631 RecX family ABUW_1748 PF00154 recA bacterial DNA recombination protein ABUW_1749 PF01479 S4 domain ABUW_1750 PF13419 Haloacid dehalogenase-like hydrolase ABUW_1751 PF05666 ABUW_1751 ABUW_1754 PF13302 Acetyltransferase (GNAT) domain ABUW_1755 PF01037 AsnC family ABUW_1755 PF13412 Winged helix-turn-helix DNA-binding ABUW_1756 PF00266 Aminotransferase class-V ABUW_1757 PF00324 Amino acid permease ABUW_1758 PF07859 alpha/beta hydrolase fold ABUW_1759 PF00082 Subtilase family ABUW_1759 PF05922 Peptidase inhibitor I9 ABUW_1760 PF00916 ABUW_1760 ABUW_1760 PF01740 STAS domain ABUW_1761 PF02586 Uncharacterised ACR, COG2135 ABUW_1762 PF07995 Glucose / Sorbosone dehydrogenase ABUW_1763 PF00582 Universal stress protein family ABUW_1764 PF00563 EAL domain ABUW_1764 PF00990 GGDEF domain ABUW_1764 PF08447 PAS fold ABUW_1764 PF08448 PAS fold ABUW_1766 PF13737 ABUW_1766 ABUW_1768 PF01047 MarR family ABUW_1769 PF08308 ABUW_1769 ABUW_1770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABUW_1770 PF02378 Phosphotransferase system, EIIC ABUW_1771 PF00294 pfkB family carbohydrate kinase ABUW_1772 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABUW_1772 PF00381 PTS HPr component phosphorylation site ABUW_1772 PF00391 PEP-utilising enzyme, mobile domain ABUW_1772 PF02896 PEP-utilising enzyme, TIM barrel domain ABUW_1772 PF05524 PEP-utilising enzyme, N-terminal ABUW_1773 PF12146 Putative lysophospholipase ABUW_1776 PF03928 Domain of unknown function (DUF336) ABUW_1777 PF05525 ABUW_1777 ABUW_1778 PF00557 Metallopeptidase family M24 ABUW_1779 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1779 PF03466 LysR substrate binding domain ABUW_1781 PF00462 Glutaredoxin ABUW_1782 PF00202 Aminotransferase class-III ABUW_1783 PF00571 CBS domain ABUW_1784 PF11042 ABUW_1784 ABUW_1789 PF00448 SRP54-type protein, GTPase domain ABUW_1789 PF02881 SRP54-type protein, helical bundle domain ABUW_1790 PF00881 Nitroreductase family ABUW_1791 PF09829 ABUW_1791 ABUW_1792 PF09600 ABUW_1792 ABUW_1793 PF08173 ABUW_1793 ABUW_1794 PF02322 ABUW_1794 ABUW_1795 PF01654 ABUW_1795 ABUW_1797 PF07290 ABUW_1797 ABUW_1798 PF00355 Rieske [2Fe-2S] domain ABUW_1799 PF00294 pfkB family carbohydrate kinase ABUW_1800 PF00593 TonB dependent receptor ABUW_1800 PF07715 TonB-dependent Receptor Plug Domain ABUW_1802 PF00675 Insulinase (Peptidase family M16) ABUW_1802 PF05193 Peptidase M16 inactive domain ABUW_1802 PF08367 Peptidase M16C associated ABUW_1803 PF02253 Phospholipase A1 ABUW_1804 PF02386 Cation transport protein ABUW_1805 PF02254 TrkA-N domain ABUW_1806 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_1806 PF00585 C-terminal regulatory domain of Threonine dehydratase ABUW_1807 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ABUW_1808 PF01863 Protein of unknown function DUF45 ABUW_1811 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABUW_1811 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABUW_1813 PF02617 ATP-dependent Clp protease adaptor protein ClpS ABUW_1814 PF00004 ATPase family associated with various cellular activities (AAA) ABUW_1814 PF02861 Clp amino terminal domain ABUW_1814 PF07724 AAA domain (Cdc48 subfamily) ABUW_1814 PF10431 C-terminal, D2-small domain, of ClpB protein ABUW_1815 PF02694 ABUW_1815 ABUW_1816 PF00793 DAHP synthetase I family ABUW_1817 PF12697 Alpha/beta hydrolase family ABUW_1818 PF03551 Transcriptional regulator PadR-like family ABUW_1818 PF10400 Virulence activator alpha C-term ABUW_1819 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABUW_1819 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_1820 PF12680 SnoaL-like domain ABUW_1821 PF13472 GDSL-like Lipase/Acylhydrolase family ABUW_1822 PF12146 Putative lysophospholipase ABUW_1823 PF10118 ABUW_1823 ABUW_1825 PF00117 Glutamine amidotransferase class-I ABUW_1825 PF06418 CTP synthase N-terminus ABUW_1826 PF00793 DAHP synthetase I family ABUW_1827 PF00113 Enolase, C-terminal TIM barrel domain ABUW_1827 PF03952 Enolase, N-terminal domain ABUW_1828 PF04239 Protein of unknown function (DUF421) ABUW_1829 PF04977 Septum formation initiator ABUW_1830 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABUW_1831 PF01144 Coenzyme A transferase ABUW_1832 PF01144 Coenzyme A transferase ABUW_1833 PF00108 Thiolase, N-terminal domain ABUW_1833 PF02803 Thiolase, C-terminal domain ABUW_1834 PF00206 Lyase ABUW_1834 PF10397 Adenylosuccinate lyase C-terminus ABUW_1835 PF00561 alpha/beta hydrolase fold ABUW_1836 PF07690 Major Facilitator Superfamily ABUW_1837 PF02627 Carboxymuconolactone decarboxylase family ABUW_1838 PF00775 Dioxygenase ABUW_1838 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ABUW_1839 PF00775 Dioxygenase ABUW_1840 PF01487 Type I 3-dehydroquinase ABUW_1841 PF13229 Right handed beta helix region ABUW_1842 PF04966 Carbohydrate-selective porin, OprB family ABUW_1843 PF01011 PQQ enzyme repeat ABUW_1845 PF04143 ABUW_1845 ABUW_1846 PF04143 ABUW_1846 ABUW_1847 PF00753 Metallo-beta-lactamase superfamily ABUW_1848 PF01614 Bacterial transcriptional regulator ABUW_1848 PF09339 IclR helix-turn-helix domain ABUW_1849 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1849 PF03466 LysR substrate binding domain ABUW_1850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_1850 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_1850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_1851 PF01636 Phosphotransferase enzyme family ABUW_1852 PF00300 Histidine phosphatase superfamily (branch 1) ABUW_1853 PF00106 short chain dehydrogenase ABUW_1854 PF03573 outer membrane porin, OprD family ABUW_1855 PF07690 Major Facilitator Superfamily ABUW_1856 PF01047 MarR family ABUW_1857 PF01425 Amidase ABUW_1858 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_1858 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABUW_1860 PF13577 SnoaL-like domain ABUW_1861 PF00355 Rieske [2Fe-2S] domain ABUW_1861 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABUW_1862 PF00866 Ring hydroxylating beta subunit ABUW_1863 PF13561 Enoyl-(Acyl carrier protein) reductase ABUW_1864 PF00111 2Fe-2S iron-sulfur cluster binding domain ABUW_1864 PF00175 Oxidoreductase NAD-binding domain ABUW_1864 PF00970 Oxidoreductase FAD-binding domain ABUW_1865 PF01613 Flavin reductase like domain ABUW_1866 PF12833 Helix-turn-helix domain ABUW_1866 PF14525 ABUW_1866 ABUW_1867 PF01179 Copper amine oxidase, enzyme domain ABUW_1867 PF02727 Copper amine oxidase, N2 domain ABUW_1867 PF02728 Copper amine oxidase, N3 domain ABUW_1867 PF07833 Copper amine oxidase N-terminal domain ABUW_1869 PF00171 Aldehyde dehydrogenase family ABUW_1870 PF01804 Penicillin amidase ABUW_1871 PF00561 alpha/beta hydrolase fold ABUW_1872 PF00108 Thiolase, N-terminal domain ABUW_1872 PF02803 Thiolase, C-terminal domain ABUW_1873 PF01144 Coenzyme A transferase ABUW_1874 PF01144 Coenzyme A transferase ABUW_1875 PF00775 Dioxygenase ABUW_1875 PF04444 Catechol dioxygenase N terminus ABUW_1876 PF02426 Muconolactone delta-isomerase ABUW_1877 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABUW_1877 PF13378 Enolase C-terminal domain-like ABUW_1878 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1878 PF03466 LysR substrate binding domain ABUW_1879 PF09694 ABUW_1879 ABUW_1880 PF00392 Bacterial regulatory proteins, gntR family ABUW_1880 PF07729 FCD domain ABUW_1881 PF00920 Dehydratase family ABUW_1884 PF00171 Aldehyde dehydrogenase family ABUW_1886 PF00561 alpha/beta hydrolase fold ABUW_1887 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABUW_1888 PF03435 Saccharopine dehydrogenase ABUW_1889 PF01965 DJ-1/PfpI family ABUW_1890 PF13411 MerR HTH family regulatory protein ABUW_1891 PF01965 DJ-1/PfpI family ABUW_1892 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_1893 PF02082 Transcriptional regulator ABUW_1894 PF12706 Beta-lactamase superfamily domain ABUW_1895 PF00440 Bacterial regulatory proteins, tetR family ABUW_1896 PF12625 ABUW_1896 ABUW_1896 PF12833 Helix-turn-helix domain ABUW_1897 PF00106 short chain dehydrogenase ABUW_1898 PF06314 Acetoacetate decarboxylase (ADC) ABUW_1899 PF10118 ABUW_1899 ABUW_1900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABUW_1902 PF07995 Glucose / Sorbosone dehydrogenase ABUW_1904 PF03992 Antibiotic biosynthesis monooxygenase ABUW_1905 PF00857 Isochorismatase family ABUW_1906 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1906 PF03466 LysR substrate binding domain ABUW_1907 PF07995 Glucose / Sorbosone dehydrogenase ABUW_1908 PF00999 Sodium/hydrogen exchanger family ABUW_1908 PF02254 TrkA-N domain ABUW_1910 PF01546 Peptidase family M20/M25/M40 ABUW_1910 PF07687 Peptidase dimerisation domain ABUW_1912 PF00440 Bacterial regulatory proteins, tetR family ABUW_1916 PF10004 ABUW_1916 ABUW_1917 PF14568 SMI1-KNR4 cell-wall ABUW_1920 PF10077 ABUW_1920 ABUW_1921 PF07690 Major Facilitator Superfamily ABUW_1922 PF04909 Amidohydrolase ABUW_1923 PF07158 ABUW_1923 ABUW_1924 PF00392 Bacterial regulatory proteins, gntR family ABUW_1924 PF07702 UTRA domain ABUW_1925 PF08450 SMP-30/Gluconolaconase/LRE-like region ABUW_1926 PF07690 Major Facilitator Superfamily ABUW_1927 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1927 PF03466 LysR substrate binding domain ABUW_1928 PF04657 ABUW_1928 ABUW_1929 PF04657 ABUW_1929 ABUW_1930 PF13437 HlyD family secretion protein ABUW_1930 PF13533 Biotin-lipoyl like ABUW_1931 PF07690 Major Facilitator Superfamily ABUW_1932 PF00440 Bacterial regulatory proteins, tetR family ABUW_1932 PF14246 AefR-like transcriptional repressor, C-terminal region ABUW_1933 PF00171 Aldehyde dehydrogenase family ABUW_1934 PF00920 Dehydratase family ABUW_1935 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABUW_1936 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1936 PF03466 LysR substrate binding domain ABUW_1937 PF01370 NAD dependent epimerase/dehydratase family ABUW_1938 PF07690 Major Facilitator Superfamily ABUW_1939 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABUW_1939 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABUW_1942 PF00156 Phosphoribosyl transferase domain ABUW_1943 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABUW_1944 PF00293 NUDIX domain ABUW_1945 PF02219 Methylenetetrahydrofolate reductase ABUW_1945 PF12225 ABUW_1945 ABUW_1947 PF00196 Bacterial regulatory proteins, luxR family ABUW_1948 PF01425 Amidase ABUW_1949 PF13437 HlyD family secretion protein ABUW_1949 PF13533 Biotin-lipoyl like ABUW_1950 PF07690 Major Facilitator Superfamily ABUW_1952 PF03321 GH3 auxin-responsive promoter ABUW_1953 PF02321 Outer membrane efflux protein ABUW_1955 PF01975 Survival protein SurE ABUW_1957 PF13328 HD domain ABUW_1958 PF00271 Helicase conserved C-terminal domain ABUW_1958 PF04851 Type III restriction enzyme, res subunit ABUW_1959 PF00440 Bacterial regulatory proteins, tetR family ABUW_1964 PF00583 Acetyltransferase (GNAT) family ABUW_1965 PF00326 Prolyl oligopeptidase family ABUW_1966 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_1966 PF03466 LysR substrate binding domain ABUW_1967 PF00106 short chain dehydrogenase ABUW_1968 PF00106 short chain dehydrogenase ABUW_1969 PF12146 Putative lysophospholipase ABUW_1970 PF12625 ABUW_1970 ABUW_1970 PF12833 Helix-turn-helix domain ABUW_1972 PF00512 His Kinase A (phospho-acceptor) domain ABUW_1972 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_1973 PF00072 Response regulator receiver domain ABUW_1973 PF00486 Transcriptional regulatory protein, C terminal ABUW_1974 PF16576 ABUW_1974 ABUW_1975 PF00873 AcrB/AcrD/AcrF family ABUW_1976 PF02321 Outer membrane efflux protein ABUW_1977 PF12146 Putative lysophospholipase ABUW_1978 PF13738 Pyridine nucleotide-disulphide oxidoreductase ABUW_1979 PF00440 Bacterial regulatory proteins, tetR family ABUW_1980 PF01266 FAD dependent oxidoreductase ABUW_1982 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ABUW_1984 PF01381 Helix-turn-helix ABUW_1986 PF02486 ABUW_1986 ABUW_1991 PF10734 ABUW_1991 ABUW_1992 PF05707 Zonular occludens toxin (Zot) ABUW_1998 PF02486 ABUW_1998 ABUW_2003 PF05707 Zonular occludens toxin (Zot) ABUW_2004 PF10734 ABUW_2004 ABUW_2006 PF10389 Bacteriophage coat protein B ABUW_2009 PF02486 ABUW_2009 ABUW_2014 PF05707 Zonular occludens toxin (Zot) ABUW_2015 PF10734 ABUW_2015 ABUW_2017 PF10389 Bacteriophage coat protein B ABUW_2020 PF02486 ABUW_2020 ABUW_2025 PF05707 Zonular occludens toxin (Zot) ABUW_2026 PF10734 ABUW_2026 ABUW_2028 PF10389 Bacteriophage coat protein B ABUW_2031 PF02486 ABUW_2031 ABUW_2035 PF05144 ABUW_2035 ABUW_2035 PF05155 ABUW_2035 ABUW_2038 PF02486 ABUW_2038 ABUW_2042 PF05144 ABUW_2042 ABUW_2042 PF05155 ABUW_2042 ABUW_2045 PF05144 ABUW_2045 ABUW_2045 PF05155 ABUW_2045 ABUW_2048 PF02486 ABUW_2048 ABUW_2052 PF16970 ABUW_2052 ABUW_2053 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABUW_2053 PF02753 Pili assembly chaperone PapD, C-terminal domain ABUW_2054 PF00577 Outer membrane usher protein ABUW_2054 PF13953 PapC C-terminal domain ABUW_2054 PF13954 PapC N-terminal domain ABUW_2055 PF00419 Fimbrial protein ABUW_2056 PF16223 ABUW_2056 ABUW_2057 PF00107 Zinc-binding dehydrogenase ABUW_2057 PF08240 Alcohol dehydrogenase GroES-like domain ABUW_2059 PF00199 Catalase ABUW_2062 PF13091 PLD-like domain ABUW_2066 PF01244 Membrane dipeptidase (Peptidase family M19) ABUW_2067 PF04055 Radical SAM superfamily ABUW_2067 PF13186 Iron-sulfur cluster-binding domain ABUW_2067 PF13353 4Fe-4S single cluster domain ABUW_2068 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ABUW_2069 PF03070 TENA/THI-4/PQQC family ABUW_2070 PF12706 Beta-lactamase superfamily domain ABUW_2071 PF08042 ABUW_2071 ABUW_2072 PF02503 Polyphosphate kinase middle domain ABUW_2072 PF13089 Polyphosphate kinase N-terminal domain ABUW_2072 PF13090 Polyphosphate kinase C-terminal domain ABUW_2073 PF00149 Calcineurin-like phosphoesterase ABUW_2073 PF02872 5'-nucleotidase, C-terminal domain ABUW_2074 PF01475 Ferric uptake regulator family ABUW_2075 PF00857 Isochorismatase family ABUW_2076 PF13561 Enoyl-(Acyl carrier protein) reductase ABUW_2077 PF00005 ABC transporter ABUW_2078 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2079 PF13531 Bacterial extracellular solute-binding protein ABUW_2080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2081 PF00355 Rieske [2Fe-2S] domain ABUW_2081 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABUW_2082 PF00866 Ring hydroxylating beta subunit ABUW_2083 PF00111 2Fe-2S iron-sulfur cluster binding domain ABUW_2083 PF00175 Oxidoreductase NAD-binding domain ABUW_2083 PF00970 Oxidoreductase FAD-binding domain ABUW_2084 PF12833 Helix-turn-helix domain ABUW_2084 PF14525 ABUW_2084 ABUW_2085 PF13557 ABUW_2085 ABUW_2086 PF01613 Flavin reductase like domain ABUW_2088 PF13561 Enoyl-(Acyl carrier protein) reductase ABUW_2089 PF01738 Dienelactone hydrolase family ABUW_2090 PF07690 Major Facilitator Superfamily ABUW_2091 PF12833 Helix-turn-helix domain ABUW_2091 PF14525 ABUW_2091 ABUW_2092 PF13561 Enoyl-(Acyl carrier protein) reductase ABUW_2093 PF02447 ABUW_2093 ABUW_2095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2095 PF03466 LysR substrate binding domain ABUW_2096 PF01144 Coenzyme A transferase ABUW_2097 PF01144 Coenzyme A transferase ABUW_2098 PF02667 ABUW_2098 ABUW_2099 PF00108 Thiolase, N-terminal domain ABUW_2099 PF02803 Thiolase, C-terminal domain ABUW_2100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2100 PF03466 LysR substrate binding domain ABUW_2101 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2101 PF03466 LysR substrate binding domain ABUW_2104 PF00206 Lyase ABUW_2104 PF10415 Fumarase C C-terminus ABUW_2105 PF00593 TonB dependent receptor ABUW_2105 PF07715 TonB-dependent Receptor Plug Domain ABUW_2106 PF00083 Sugar (and other) transporter ABUW_2106 PF07690 Major Facilitator Superfamily ABUW_2107 PF06155 Protein of unknown function (DUF971) ABUW_2108 PF13646 HEAT repeats ABUW_2109 PF00005 ABC transporter ABUW_2110 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2111 PF13379 NMT1-like family ABUW_2112 PF13187 4Fe-4S dicluster domain ABUW_2113 PF00890 FAD binding domain ABUW_2113 PF02910 Fumarate reductase flavoprotein C-term ABUW_2114 PF00392 Bacterial regulatory proteins, gntR family ABUW_2114 PF07702 UTRA domain ABUW_2115 PF02417 ABUW_2115 ABUW_2116 PF02525 Flavodoxin-like fold ABUW_2117 PF01638 HxlR-like helix-turn-helix ABUW_2118 PF12833 Helix-turn-helix domain ABUW_2119 PF00892 EamA-like transporter family ABUW_2120 PF00742 Homoserine dehydrogenase ABUW_2120 PF03447 Homoserine dehydrogenase, NAD binding domain ABUW_2121 PF01925 ABUW_2121 ABUW_2122 PF04273 Putative phosphatase (DUF442) ABUW_2122 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_2123 PF00753 Metallo-beta-lactamase superfamily ABUW_2124 PF00158 Sigma-54 interaction domain ABUW_2124 PF02954 Bacterial regulatory protein, Fis family ABUW_2125 PF01062 ABUW_2125 ABUW_2126 PF00107 Zinc-binding dehydrogenase ABUW_2126 PF08240 Alcohol dehydrogenase GroES-like domain ABUW_2127 PF00106 short chain dehydrogenase ABUW_2128 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABUW_2128 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_2129 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABUW_2129 PF00364 Biotin-requiring enzyme ABUW_2129 PF02817 e3 binding domain ABUW_2130 PF02779 Transketolase, pyrimidine binding domain ABUW_2130 PF02780 Transketolase, C-terminal domain ABUW_2131 PF00676 Dehydrogenase E1 component ABUW_2132 PF04055 Radical SAM superfamily ABUW_2134 PF14518 Iron-containing redox enzyme ABUW_2135 PF00990 GGDEF domain ABUW_2136 PF01264 Chorismate synthase ABUW_2137 PF05175 Methyltransferase small domain ABUW_2138 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_2139 PF05762 VWA domain containing CoxE-like protein ABUW_2140 PF00004 ATPase family associated with various cellular activities (AAA) ABUW_2142 PF05166 YcgL domain ABUW_2146 PF00570 HRDC domain ABUW_2146 PF01612 3'-5' exonuclease ABUW_2147 PF02132 RecR protein ABUW_2147 PF13662 Toprim domain ABUW_2148 PF02575 YbaB/EbfC DNA-binding family ABUW_2150 PF01053 Cys/Met metabolism PLP-dependent enzyme ABUW_2151 PF00561 alpha/beta hydrolase fold ABUW_2152 PF08241 Methyltransferase domain ABUW_2154 PF13103 TonB C terminal ABUW_2157 PF04828 Glutathione-dependent formaldehyde-activating enzyme ABUW_2158 PF13308 YARHG domain ABUW_2159 PF01230 HIT domain ABUW_2160 PF13609 Gram-negative porin ABUW_2161 PF06078 Bacterial protein of unknown function (DUF937) ABUW_2163 PF10977 ABUW_2163 ABUW_2164 PF02684 ABUW_2164 ABUW_2165 PF00593 TonB dependent receptor ABUW_2165 PF07715 TonB-dependent Receptor Plug Domain ABUW_2167 PF03929 ABUW_2167 ABUW_2169 PF01925 ABUW_2169 ABUW_2170 PF00793 DAHP synthetase I family ABUW_2171 PF02654 ABUW_2171 ABUW_2172 PF00328 Histidine phosphatase superfamily (branch 2) ABUW_2173 PF00300 Histidine phosphatase superfamily (branch 1) ABUW_2174 PF02277 Phosphoribosyltransferase ABUW_2175 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ABUW_2176 PF13563 2'-5' RNA ligase superfamily ABUW_2177 PF08125 Mannitol dehydrogenase C-terminal domain ABUW_2177 PF13419 Haloacid dehalogenase-like hydrolase ABUW_2178 PF13523 Acetyltransferase (GNAT) domain ABUW_2180 PF03929 ABUW_2180 ABUW_2182 PF00593 TonB dependent receptor ABUW_2182 PF07715 TonB-dependent Receptor Plug Domain ABUW_2183 PF03737 Demethylmenaquinone methyltransferase ABUW_2184 PF11575 ABUW_2184 ABUW_2185 PF04183 IucA / IucC family ABUW_2185 PF06276 Ferric iron reductase FhuF-like transporter ABUW_2186 PF04183 IucA / IucC family ABUW_2186 PF06276 Ferric iron reductase FhuF-like transporter ABUW_2187 PF07690 Major Facilitator Superfamily ABUW_2188 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABUW_2189 PF04183 IucA / IucC family ABUW_2189 PF06276 Ferric iron reductase FhuF-like transporter ABUW_2190 PF04073 Aminoacyl-tRNA editing domain ABUW_2192 PF03109 ABUW_2192 ABUW_2193 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2193 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_2194 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2194 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_2195 PF00487 ABUW_2195 ABUW_2196 PF12833 Helix-turn-helix domain ABUW_2196 PF12852 Cupin ABUW_2197 PF13616 PPIC-type PPIASE domain ABUW_2197 PF13624 SurA N-terminal domain ABUW_2198 PF00216 Bacterial DNA-binding protein ABUW_2199 PF05597 ABUW_2199 ABUW_2201 PF02082 Transcriptional regulator ABUW_2202 PF00266 Aminotransferase class-V ABUW_2203 PF01592 NifU-like N terminal domain ABUW_2204 PF01521 Iron-sulphur cluster biosynthesis ABUW_2205 PF00226 DnaJ domain ABUW_2205 PF07743 HSCB C-terminal oligomerisation domain ABUW_2206 PF00012 Hsp70 protein ABUW_2207 PF00111 2Fe-2S iron-sulfur cluster binding domain ABUW_2208 PF00211 Adenylate and Guanylate cyclase catalytic domain ABUW_2209 PF01230 HIT domain ABUW_2210 PF00270 DEAD/DEAH box helicase ABUW_2210 PF00271 Helicase conserved C-terminal domain ABUW_2210 PF02559 CarD-like/TRCF domain ABUW_2210 PF03461 TRCF domain ABUW_2212 PF04261 Dyp-type peroxidase family ABUW_2213 PF13417 Glutathione S-transferase, N-terminal domain ABUW_2214 PF03737 Demethylmenaquinone methyltransferase ABUW_2215 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABUW_2216 PF01649 Ribosomal protein S20 ABUW_2217 PF00300 Histidine phosphatase superfamily (branch 1) ABUW_2218 PF00459 Inositol monophosphatase family ABUW_2220 PF02586 Uncharacterised ACR, COG2135 ABUW_2221 PF00005 ABC transporter ABUW_2221 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABUW_2222 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2222 PF12911 ABUW_2222 ABUW_2223 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2224 PF01432 Peptidase family M3 ABUW_2225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABUW_2226 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABUW_2228 PF00593 TonB dependent receptor ABUW_2228 PF07715 TonB-dependent Receptor Plug Domain ABUW_2229 PF03544 Gram-negative bacterial TonB protein C-terminal ABUW_2230 PF01618 ABUW_2230 ABUW_2231 PF02472 Biopolymer transport protein ExbD/TolR ABUW_2232 PF02472 Biopolymer transport protein ExbD/TolR ABUW_2234 PF01274 Malate synthase ABUW_2235 PF03969 AFG1-like ATPase ABUW_2236 PF12625 ABUW_2236 ABUW_2236 PF12833 Helix-turn-helix domain ABUW_2237 PF00743 Flavin-binding monooxygenase-like ABUW_2238 PF03956 ABUW_2238 ABUW_2239 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABUW_2240 PF06305 ABUW_2240 ABUW_2241 PF00216 Bacterial DNA-binding protein ABUW_2242 PF00575 S1 RNA binding domain ABUW_2243 PF02224 Cytidylate kinase ABUW_2244 PF10604 Polyketide cyclase / dehydrase and lipid transport ABUW_2245 PF14437 ABUW_2245 ABUW_2246 PF16113 ABUW_2246 ABUW_2247 PF03167 Uracil DNA glycosylase superfamily ABUW_2248 PF01242 6-pyruvoyl tetrahydropterin synthase ABUW_2249 PF03934 Type II secretion system (T2SS), protein K ABUW_2250 PF07963 Prokaryotic N-terminal methylation motif ABUW_2250 PF11612 Type II secretion system (T2SS), protein J ABUW_2251 PF02501 Type II secretion system (T2SS), protein I ABUW_2251 PF07963 Prokaryotic N-terminal methylation motif ABUW_2252 PF07963 Prokaryotic N-terminal methylation motif ABUW_2253 PF00440 Bacterial regulatory proteins, tetR family ABUW_2254 PF01026 TatD related DNase ABUW_2255 PF07238 PilZ domain ABUW_2256 PF13177 DNA polymerase III, delta subunit ABUW_2257 PF02348 Cytidylyltransferase ABUW_2258 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ABUW_2259 PF00005 ABC transporter ABUW_2259 PF00664 ABC transporter transmembrane region ABUW_2260 PF02472 Biopolymer transport protein ExbD/TolR ABUW_2261 PF01618 ABUW_2261 ABUW_2262 PF02195 ParB-like nuclease domain ABUW_2263 PF13614 AAA domain ABUW_2264 PF02527 rRNA small subunit methyltransferase G ABUW_2265 PF00483 Nucleotidyl transferase ABUW_2266 PF01636 Phosphotransferase enzyme family ABUW_2267 PF03968 OstA-like protein ABUW_2267 PF04453 Organic solvent tolerance protein ABUW_2268 PF00639 PPIC-type PPIASE domain ABUW_2268 PF09312 SurA N-terminal domain ABUW_2268 PF13616 PPIC-type PPIASE domain ABUW_2269 PF01116 Fructose-bisphosphate aldolase class-II ABUW_2271 PF00162 Phosphoglycerate kinase ABUW_2272 PF09996 Uncharacterized protein conserved in bacteria (DUF2237) ABUW_2273 PF02545 Maf-like protein ABUW_2274 PF08007 Cupin superfamily protein ABUW_2275 PF00440 Bacterial regulatory proteins, tetR family ABUW_2276 PF01022 Bacterial regulatory protein, arsR family ABUW_2277 PF00375 Sodium:dicarboxylate symporter family ABUW_2278 PF06912 ABUW_2278 ABUW_2279 PF09831 ABUW_2279 ABUW_2280 PF00005 ABC transporter ABUW_2280 PF00664 ABC transporter transmembrane region ABUW_2281 PF01575 MaoC like domain ABUW_2282 PF12625 ABUW_2282 ABUW_2282 PF12833 Helix-turn-helix domain ABUW_2283 PF01597 Glycine cleavage H-protein ABUW_2284 PF02146 Sir2 family ABUW_2285 PF00474 Sodium:solute symporter family ABUW_2286 PF01037 AsnC family ABUW_2286 PF13404 AsnC-type helix-turn-helix domain ABUW_2287 PF00171 Aldehyde dehydrogenase family ABUW_2287 PF01619 Proline dehydrogenase ABUW_2287 PF14850 DNA-binding domain of Proline dehydrogenase ABUW_2288 PF04229 GrpB protein ABUW_2289 PF05958 tRNA (Uracil-5-)-methyltransferase ABUW_2291 PF09992 Predicted periplasmic protein (DUF2233) ABUW_2292 PF04970 Lecithin retinol acyltransferase ABUW_2293 PF04264 YceI-like domain ABUW_2294 PF02566 OsmC-like protein ABUW_2295 PF00456 Transketolase, thiamine diphosphate binding domain ABUW_2295 PF02779 Transketolase, pyrimidine binding domain ABUW_2295 PF02780 Transketolase, C-terminal domain ABUW_2296 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABUW_2296 PF02772 S-adenosylmethionine synthetase, central domain ABUW_2296 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABUW_2299 PF04186 ABUW_2299 ABUW_2300 PF00905 Penicillin binding protein transpeptidase domain ABUW_2301 PF13420 Acetyltransferase (GNAT) domain ABUW_2302 PF01381 Helix-turn-helix ABUW_2304 PF02075 Crossover junction endodeoxyribonuclease RuvC ABUW_2305 PF01256 Carbohydrate kinase ABUW_2305 PF03853 YjeF-related protein N-terminus ABUW_2306 PF08331 ABUW_2306 ABUW_2306 PF13484 ABUW_2306 ABUW_2307 PF04055 Radical SAM superfamily ABUW_2307 PF06968 Biotin and Thiamin Synthesis associated domain ABUW_2310 PF16970 ABUW_2310 ABUW_2311 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABUW_2311 PF02753 Pili assembly chaperone PapD, C-terminal domain ABUW_2312 PF00577 Outer membrane usher protein ABUW_2312 PF13953 PapC C-terminal domain ABUW_2312 PF13954 PapC N-terminal domain ABUW_2313 PF00419 Fimbrial protein ABUW_2315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2315 PF03466 LysR substrate binding domain ABUW_2316 PF00892 EamA-like transporter family ABUW_2318 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABUW_2319 PF05232 ABUW_2319 ABUW_2320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2320 PF03466 LysR substrate binding domain ABUW_2322 PF00589 Phage integrase family ABUW_2325 PF00440 Bacterial regulatory proteins, tetR family ABUW_2326 PF01553 Acyltransferase ABUW_2327 PF01709 Transcriptional regulator ABUW_2328 PF01037 AsnC family ABUW_2328 PF13412 Winged helix-turn-helix DNA-binding ABUW_2330 PF00005 ABC transporter ABUW_2331 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2332 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2333 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABUW_2334 PF13417 Glutathione S-transferase, N-terminal domain ABUW_2334 PF14497 Glutathione S-transferase, C-terminal domain ABUW_2335 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_2335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_2335 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2336 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_2336 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2337 PF00296 Luciferase-like monooxygenase ABUW_2338 PF03180 NLPA lipoprotein ABUW_2339 PF03180 NLPA lipoprotein ABUW_2340 PF00005 ABC transporter ABUW_2340 PF09383 NIL domain ABUW_2341 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2342 PF01926 50S ribosome-binding GTPase ABUW_2342 PF06071 Protein of unknown function (DUF933) ABUW_2343 PF06127 ABUW_2343 ABUW_2344 PF00027 Cyclic nucleotide-binding domain ABUW_2344 PF13545 Crp-like helix-turn-helix domain ABUW_2347 PF03591 ABUW_2347 ABUW_2348 PF05437 ABUW_2348 ABUW_2349 PF14552 Tautomerase enzyme ABUW_2350 PF02222 ATP-grasp domain ABUW_2351 PF01909 Nucleotidyltransferase domain ABUW_2351 PF01966 HD domain ABUW_2351 PF08335 GlnD PII-uridylyltransferase ABUW_2352 PF00155 Aminotransferase class I and II ABUW_2353 PF01810 ABUW_2353 ABUW_2354 PF02311 AraC-like ligand binding domain ABUW_2354 PF12833 Helix-turn-helix domain ABUW_2355 PF00255 Glutathione peroxidase ABUW_2356 PF01641 SelR domain ABUW_2357 PF00155 Aminotransferase class I and II ABUW_2358 PF00375 Sodium:dicarboxylate symporter family ABUW_2359 PF00710 Asparaginase ABUW_2360 PF02811 PHP domain ABUW_2360 PF07733 Bacterial DNA polymerase III alpha subunit ABUW_2360 PF14579 Helix-hairpin-helix motif ABUW_2361 PF00588 SpoU rRNA Methylase family ABUW_2362 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_2362 PF06426 Serine acetyltransferase, N-terminal ABUW_2365 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_2365 PF13192 Thioredoxin domain ABUW_2366 PF02417 ABUW_2366 ABUW_2367 PF02417 ABUW_2367 ABUW_2368 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2368 PF03466 LysR substrate binding domain ABUW_2369 PF01758 Sodium Bile acid symporter family ABUW_2370 PF01022 Bacterial regulatory protein, arsR family ABUW_2371 PF03960 ArsC family ABUW_2372 PF07235 ABUW_2372 ABUW_2373 PF07969 Amidohydrolase family ABUW_2374 PF00857 Isochorismatase family ABUW_2375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2375 PF03466 LysR substrate binding domain ABUW_2376 PF00392 Bacterial regulatory proteins, gntR family ABUW_2376 PF07729 FCD domain ABUW_2377 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABUW_2378 PF01177 Asp/Glu/Hydantoin racemase ABUW_2379 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ABUW_2380 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2381 PF00005 ABC transporter ABUW_2382 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABUW_2384 PF00083 Sugar (and other) transporter ABUW_2385 PF00296 Luciferase-like monooxygenase ABUW_2386 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2389 PF01654 ABUW_2389 ABUW_2390 PF02322 ABUW_2390 ABUW_2392 PF00155 Aminotransferase class I and II ABUW_2392 PF00392 Bacterial regulatory proteins, gntR family ABUW_2393 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2393 PF03466 LysR substrate binding domain ABUW_2394 PF03818 ABUW_2394 ABUW_2395 PF03817 ABUW_2395 ABUW_2396 PF00698 Acyl transferase domain ABUW_2397 PF10620 ABUW_2397 ABUW_2398 PF06833 Malonate decarboxylase gamma subunit (MdcE) ABUW_2399 PF01039 Carboxyl transferase domain ABUW_2400 PF06857 ABUW_2400 ABUW_2401 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ABUW_2402 PF16957 ABUW_2402 ABUW_2403 PF07690 Major Facilitator Superfamily ABUW_2404 PF13302 Acetyltransferase (GNAT) domain ABUW_2405 PF04299 Putative FMN-binding domain ABUW_2406 PF00155 Aminotransferase class I and II ABUW_2406 PF00392 Bacterial regulatory proteins, gntR family ABUW_2407 PF04172 ABUW_2407 ABUW_2408 PF03788 ABUW_2408 ABUW_2409 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2409 PF03466 LysR substrate binding domain ABUW_2410 PF13417 Glutathione S-transferase, N-terminal domain ABUW_2410 PF14834 Glutathione S-transferase, C-terminal domain ABUW_2411 PF00043 Glutathione S-transferase, C-terminal domain ABUW_2411 PF02798 Glutathione S-transferase, N-terminal domain ABUW_2412 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2412 PF03466 LysR substrate binding domain ABUW_2413 PF13561 Enoyl-(Acyl carrier protein) reductase ABUW_2414 PF00581 Rhodanese-like domain ABUW_2415 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_2415 PF06426 Serine acetyltransferase, N-terminal ABUW_2417 PF00266 Aminotransferase class-V ABUW_2418 PF01810 ABUW_2418 ABUW_2419 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2419 PF03466 LysR substrate binding domain ABUW_2420 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABUW_2421 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABUW_2422 PF00005 ABC transporter ABUW_2423 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2424 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2425 PF14542 GCN5-related N-acetyl-transferase ABUW_2426 PF00072 Response regulator receiver domain ABUW_2426 PF00196 Bacterial regulatory proteins, luxR family ABUW_2427 PF00072 Response regulator receiver domain ABUW_2427 PF00512 His Kinase A (phospho-acceptor) domain ABUW_2427 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_2429 PF01037 AsnC family ABUW_2429 PF13412 Winged helix-turn-helix DNA-binding ABUW_2430 PF01810 ABUW_2430 ABUW_2431 PF00717 Peptidase S24-like ABUW_2433 PF10685 ABUW_2433 ABUW_2435 PF13561 Enoyl-(Acyl carrier protein) reductase ABUW_2436 PF00199 Catalase ABUW_2436 PF06628 Catalase-related immune-responsive ABUW_2437 PF14518 Iron-containing redox enzyme ABUW_2438 PF02464 Competence-damaged protein ABUW_2446 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2446 PF03466 LysR substrate binding domain ABUW_2447 PF13472 GDSL-like Lipase/Acylhydrolase family ABUW_2449 PF13649 Methyltransferase domain ABUW_2450 PF00501 AMP-binding enzyme ABUW_2450 PF13193 AMP-binding enzyme C-terminal domain ABUW_2451 PF00440 Bacterial regulatory proteins, tetR family ABUW_2452 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2452 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_2452 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_2453 PF01039 Carboxyl transferase domain ABUW_2454 PF00378 Enoyl-CoA hydratase/isomerase family ABUW_2455 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ABUW_2455 PF00364 Biotin-requiring enzyme ABUW_2455 PF02785 Biotin carboxylase C-terminal domain ABUW_2455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABUW_2456 PF00682 HMGL-like ABUW_2457 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2457 PF03466 LysR substrate binding domain ABUW_2458 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ABUW_2459 PF13622 Thioesterase-like superfamily ABUW_2460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2460 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_2460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_2460 PF12418 ABUW_2460 ABUW_2460 PF12806 ABUW_2460 ABUW_2461 PF03061 Thioesterase superfamily ABUW_2462 PF07690 Major Facilitator Superfamily ABUW_2464 PF01144 Coenzyme A transferase ABUW_2465 PF01144 Coenzyme A transferase ABUW_2466 PF07690 Major Facilitator Superfamily ABUW_2467 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2467 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_2467 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_2468 PF00378 Enoyl-CoA hydratase/isomerase family ABUW_2469 PF13561 Enoyl-(Acyl carrier protein) reductase ABUW_2470 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABUW_2470 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABUW_2471 PF00108 Thiolase, N-terminal domain ABUW_2471 PF02803 Thiolase, C-terminal domain ABUW_2472 PF01614 Bacterial transcriptional regulator ABUW_2472 PF09339 IclR helix-turn-helix domain ABUW_2473 PF07690 Major Facilitator Superfamily ABUW_2474 PF03060 Nitronate monooxygenase ABUW_2475 PF00378 Enoyl-CoA hydratase/isomerase family ABUW_2476 PF01614 Bacterial transcriptional regulator ABUW_2476 PF09339 IclR helix-turn-helix domain ABUW_2477 PF02515 CoA-transferase family III ABUW_2478 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2478 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_2478 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_2479 PF07690 Major Facilitator Superfamily ABUW_2480 PF13419 Haloacid dehalogenase-like hydrolase ABUW_2481 PF00266 Aminotransferase class-V ABUW_2482 PF01266 FAD dependent oxidoreductase ABUW_2483 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2484 PF00005 ABC transporter ABUW_2485 PF13343 Bacterial extracellular solute-binding protein ABUW_2486 PF00392 Bacterial regulatory proteins, gntR family ABUW_2486 PF07702 UTRA domain ABUW_2487 PF01494 FAD binding domain ABUW_2488 PF01614 Bacterial transcriptional regulator ABUW_2488 PF09339 IclR helix-turn-helix domain ABUW_2489 PF02525 Flavodoxin-like fold ABUW_2490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2490 PF03466 LysR substrate binding domain ABUW_2491 PF02627 Carboxymuconolactone decarboxylase family ABUW_2492 PF00171 Aldehyde dehydrogenase family ABUW_2494 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABUW_2496 PF00171 Aldehyde dehydrogenase family ABUW_2497 PF00296 Luciferase-like monooxygenase ABUW_2498 PF01613 Flavin reductase like domain ABUW_2499 PF12697 Alpha/beta hydrolase family ABUW_2500 PF06684 Amino acid synthesis ABUW_2501 PF00392 Bacterial regulatory proteins, gntR family ABUW_2501 PF07729 FCD domain ABUW_2502 PF07045 Protein of unknown function (DUF1330) ABUW_2503 PF01292 Prokaryotic cytochrome b561 ABUW_2504 PF00199 Catalase ABUW_2505 PF07690 Major Facilitator Superfamily ABUW_2506 PF00682 HMGL-like ABUW_2507 PF02515 CoA-transferase family III ABUW_2508 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2508 PF03466 LysR substrate binding domain ABUW_2513 PF00313 'Cold-shock' DNA-binding domain ABUW_2520 PF00440 Bacterial regulatory proteins, tetR family ABUW_2521 PF00580 UvrD/REP helicase N-terminal domain ABUW_2521 PF13361 UvrD-like helicase C-terminal domain ABUW_2522 PF13175 AAA ATPase domain ABUW_2523 PF03061 Thioesterase superfamily ABUW_2524 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_2525 PF07848 PaaX-like protein ABUW_2525 PF08223 PaaX-like protein C-terminal domain ABUW_2526 PF00501 AMP-binding enzyme ABUW_2526 PF14535 AMP-binding enzyme C-terminal domain ABUW_2527 PF00108 Thiolase, N-terminal domain ABUW_2527 PF02803 Thiolase, C-terminal domain ABUW_2528 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABUW_2528 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABUW_2529 PF00378 Enoyl-CoA hydratase/isomerase family ABUW_2530 PF00378 Enoyl-CoA hydratase/isomerase family ABUW_2531 PF00111 2Fe-2S iron-sulfur cluster binding domain ABUW_2531 PF00175 Oxidoreductase NAD-binding domain ABUW_2531 PF00970 Oxidoreductase FAD-binding domain ABUW_2532 PF01883 Domain of unknown function DUF59 ABUW_2533 PF05138 Phenylacetic acid catabolic protein ABUW_2534 PF06243 Phenylacetic acid degradation B ABUW_2535 PF05138 Phenylacetic acid catabolic protein ABUW_2536 PF00171 Aldehyde dehydrogenase family ABUW_2536 PF01575 MaoC like domain ABUW_2537 PF03313 ABUW_2537 ABUW_2537 PF03315 Serine dehydratase beta chain ABUW_2539 PF01609 Transposase DDE domain ABUW_2540 PF01609 Transposase DDE domain ABUW_2541 PF13520 Amino acid permease ABUW_2542 PF00171 Aldehyde dehydrogenase family ABUW_2543 PF00083 Sugar (and other) transporter ABUW_2544 PF08448 PAS fold ABUW_2544 PF12833 Helix-turn-helix domain ABUW_2545 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_2546 PF13510 2Fe-2S iron-sulfur cluster binding domain ABUW_2547 PF01266 FAD dependent oxidoreductase ABUW_2548 PF05544 Proline racemase ABUW_2549 PF00392 Bacterial regulatory proteins, gntR family ABUW_2549 PF07729 FCD domain ABUW_2550 PF00892 EamA-like transporter family ABUW_2551 PF00701 Dihydrodipicolinate synthetase family ABUW_2554 PF03891 ABUW_2554 ABUW_2554 PF11720 Peptidase inhibitor I78 family ABUW_2555 PF00376 MerR family regulatory protein ABUW_2555 PF09278 MerR, DNA binding ABUW_2557 PF02677 ABUW_2557 ABUW_2558 PF00583 Acetyltransferase (GNAT) family ABUW_2559 PF06224 ABUW_2559 ABUW_2560 PF07690 Major Facilitator Superfamily ABUW_2561 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABUW_2562 PF12796 Ankyrin repeats (3 copies) ABUW_2563 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2563 PF03466 LysR substrate binding domain ABUW_2564 PF13539 D-alanyl-D-alanine carboxypeptidase ABUW_2566 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) ABUW_2567 PF05936 ABUW_2567 ABUW_2568 PF06812 ABUW_2568 ABUW_2569 PF00004 ATPase family associated with various cellular activities (AAA) ABUW_2569 PF07724 AAA domain (Cdc48 subfamily) ABUW_2569 PF10431 C-terminal, D2-small domain, of ClpB protein ABUW_2570 PF05488 PAAR motif ABUW_2571 PF00691 OmpA family ABUW_2572 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) ABUW_2573 PF06744 ABUW_2573 ABUW_2573 PF06761 ABUW_2573 ABUW_2573 PF14331 ABUW_2573 ABUW_2575 PF06996 ABUW_2575 ABUW_2576 PF05947 ABUW_2576 ABUW_2577 PF04965 Gene 25-like lysozyme ABUW_2578 PF05638 Protein of unknown function (DUF796) ABUW_2579 PF05943 ABUW_2579 ABUW_2580 PF05591 ABUW_2580 ABUW_2583 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2584 PF00005 ABC transporter ABUW_2585 PF09084 NMT1/THI5 like ABUW_2586 PF01425 Amidase ABUW_2587 PF08753 NikR C terminal nickel binding domain ABUW_2589 PF01638 HxlR-like helix-turn-helix ABUW_2590 PF02525 Flavodoxin-like fold ABUW_2591 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ABUW_2591 PF00364 Biotin-requiring enzyme ABUW_2591 PF02626 Allophanate hydrolase subunit 2 ABUW_2591 PF02682 Allophanate hydrolase subunit 1 ABUW_2591 PF02785 Biotin carboxylase C-terminal domain ABUW_2591 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABUW_2592 PF09347 Domain of unknown function (DUF1989) ABUW_2593 PF09347 Domain of unknown function (DUF1989) ABUW_2594 PF08240 Alcohol dehydrogenase GroES-like domain ABUW_2594 PF13823 Alcohol dehydrogenase GroES-associated ABUW_2595 PF10604 Polyketide cyclase / dehydrase and lipid transport ABUW_2596 PF00440 Bacterial regulatory proteins, tetR family ABUW_2601 PF08238 Sel1 repeat ABUW_2602 PF00654 Voltage gated chloride channel ABUW_2603 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ABUW_2603 PF00364 Biotin-requiring enzyme ABUW_2603 PF02785 Biotin carboxylase C-terminal domain ABUW_2603 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABUW_2604 PF02626 Allophanate hydrolase subunit 2 ABUW_2604 PF02682 Allophanate hydrolase subunit 1 ABUW_2605 PF07286 Protein of unknown function (DUF1445) ABUW_2606 PF03746 LamB/YcsF family ABUW_2607 PF01566 ABUW_2607 ABUW_2609 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2609 PF03466 LysR substrate binding domain ABUW_2617 PF03527 ABUW_2617 ABUW_2617 PF05593 ABUW_2617 ABUW_2617 PF14412 ABUW_2617 ABUW_2618 PF05954 Phage late control gene D protein (GPD) ABUW_2618 PF10106 ABUW_2618 ABUW_2618 PF13296 ABUW_2618 ABUW_2619 PF13354 Beta-lactamase enzyme family ABUW_2620 PF00583 Acetyltransferase (GNAT) family ABUW_2623 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABUW_2623 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABUW_2624 PF08856 ABUW_2624 ABUW_2627 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) ABUW_2628 PF07690 Major Facilitator Superfamily ABUW_2629 PF00440 Bacterial regulatory proteins, tetR family ABUW_2630 PF03279 ABUW_2630 ABUW_2632 PF00892 EamA-like transporter family ABUW_2633 PF01037 AsnC family ABUW_2633 PF13404 AsnC-type helix-turn-helix domain ABUW_2634 PF00488 MutS domain V ABUW_2634 PF01624 MutS domain I ABUW_2634 PF05188 MutS domain II ABUW_2634 PF05190 MutS family domain IV ABUW_2634 PF05192 MutS domain III ABUW_2635 PF13673 Acetyltransferase (GNAT) domain ABUW_2636 PF00037 4Fe-4S binding domain ABUW_2636 PF11953 Domain of unknown function (DUF3470) ABUW_2637 PF08291 Peptidase M15 ABUW_2638 PF01596 O-methyltransferase ABUW_2639 PF00582 Universal stress protein family ABUW_2640 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_2640 PF14602 Hexapeptide repeat of succinyl-transferase ABUW_2641 PF01205 Uncharacterized protein family UPF0029 ABUW_2641 PF09186 Domain of unknown function (DUF1949) ABUW_2642 PF13437 HlyD family secretion protein ABUW_2642 PF13533 Biotin-lipoyl like ABUW_2643 PF00005 ABC transporter ABUW_2643 PF00664 ABC transporter transmembrane region ABUW_2644 PF02321 Outer membrane efflux protein ABUW_2645 PF00005 ABC transporter ABUW_2645 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABUW_2646 PF03968 OstA-like protein ABUW_2647 PF06835 Lipopolysaccharide-assembly, LptC-related ABUW_2648 PF08282 haloacid dehalogenase-like hydrolase ABUW_2649 PF00571 CBS domain ABUW_2649 PF01380 SIS domain ABUW_2650 PF01406 tRNA synthetases class I (C) catalytic domain ABUW_2650 PF09190 DALR domain ABUW_2653 PF00589 Phage integrase family ABUW_2658 PF16223 ABUW_2658 ABUW_2664 PF09979 ABUW_2664 ABUW_2666 PF09926 ABUW_2666 ABUW_2667 PF04233 ABUW_2667 ABUW_2668 PF06381 ABUW_2668 ABUW_2669 PF17289 ABUW_2669 ABUW_2670 PF10045 ABUW_2670 ABUW_2679 PF13628 ABUW_2679 ABUW_2682 PF01638 HxlR-like helix-turn-helix ABUW_2683 PF07690 Major Facilitator Superfamily ABUW_2684 PF04233 ABUW_2684 ABUW_2688 PF03807 NADP oxidoreductase coenzyme F420-dependent ABUW_2688 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABUW_2690 PF00313 'Cold-shock' DNA-binding domain ABUW_2691 PF01810 ABUW_2691 ABUW_2692 PF05838 Glycosyl hydrolase 108 ABUW_2692 PF09374 Predicted Peptidoglycan domain ABUW_2695 PF00717 Peptidase S24-like ABUW_2695 PF12844 Helix-turn-helix domain ABUW_2698 PF02601 ABUW_2698 ABUW_2698 PF13742 ABUW_2698 ABUW_2699 PF02609 Exonuclease VII small subunit ABUW_2701 PF01810 ABUW_2701 ABUW_2703 PF03860 Domain of Unknown Function (DUF326) ABUW_2705 PF04828 Glutathione-dependent formaldehyde-activating enzyme ABUW_2706 PF00376 MerR family regulatory protein ABUW_2706 PF09278 MerR, DNA binding ABUW_2707 PF00122 E1-E2 ATPase ABUW_2707 PF00403 Heavy-metal-associated domain ABUW_2707 PF00702 haloacid dehalogenase-like hydrolase ABUW_2708 PF00403 Heavy-metal-associated domain ABUW_2709 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2709 PF03466 LysR substrate binding domain ABUW_2710 PF00355 Rieske [2Fe-2S] domain ABUW_2710 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABUW_2711 PF00866 Ring hydroxylating beta subunit ABUW_2712 PF00111 2Fe-2S iron-sulfur cluster binding domain ABUW_2712 PF00175 Oxidoreductase NAD-binding domain ABUW_2712 PF00970 Oxidoreductase FAD-binding domain ABUW_2713 PF00106 short chain dehydrogenase ABUW_2714 PF03594 ABUW_2714 ABUW_2715 PF07690 Major Facilitator Superfamily ABUW_2716 PF03573 outer membrane porin, OprD family ABUW_2717 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABUW_2717 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABUW_2718 PF00270 DEAD/DEAH box helicase ABUW_2718 PF00271 Helicase conserved C-terminal domain ABUW_2718 PF04408 Helicase associated domain (HA2) ABUW_2718 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ABUW_2718 PF11898 ABUW_2718 ABUW_2719 PF00578 AhpC/TSA family ABUW_2719 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABUW_2720 PF13619 ABUW_2720 ABUW_2721 PF01596 O-methyltransferase ABUW_2722 PF07866 Protein of unknown function (DUF1653) ABUW_2723 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_2723 PF13192 Thioredoxin domain ABUW_2725 PF00043 Glutathione S-transferase, C-terminal domain ABUW_2725 PF02798 Glutathione S-transferase, N-terminal domain ABUW_2726 PF00932 Lamin Tail Domain ABUW_2727 PF02390 Putative methyltransferase ABUW_2728 PF00043 Glutathione S-transferase, C-terminal domain ABUW_2728 PF02798 Glutathione S-transferase, N-terminal domain ABUW_2729 PF03807 NADP oxidoreductase coenzyme F420-dependent ABUW_2729 PF10728 Domain of unknown function (DUF2520) ABUW_2730 PF00691 OmpA family ABUW_2732 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABUW_2732 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABUW_2734 PF01170 Putative RNA methylase family UPF0020 ABUW_2734 PF02926 THUMP domain ABUW_2734 PF10672 S-adenosylmethionine-dependent methyltransferase ABUW_2736 PF02464 Competence-damaged protein ABUW_2737 PF00004 ATPase family associated with various cellular activities (AAA) ABUW_2737 PF02861 Clp amino terminal domain ABUW_2737 PF07724 AAA domain (Cdc48 subfamily) ABUW_2737 PF10431 C-terminal, D2-small domain, of ClpB protein ABUW_2738 PF01551 Peptidase family M23 ABUW_2739 PF00583 Acetyltransferase (GNAT) family ABUW_2740 PF02566 OsmC-like protein ABUW_2741 PF00027 Cyclic nucleotide-binding domain ABUW_2741 PF00325 Bacterial regulatory proteins, crp family ABUW_2742 PF00248 Aldo/keto reductase family ABUW_2743 PF01435 Peptidase family M48 ABUW_2745 PF00709 Adenylosuccinate synthetase ABUW_2746 PF13393 Histidyl-tRNA synthetase ABUW_2747 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABUW_2747 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABUW_2748 PF01411 tRNA synthetases class II (A) ABUW_2748 PF02272 DHHA1 domain ABUW_2748 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABUW_2749 PF00696 Amino acid kinase family ABUW_2749 PF01842 ACT domain ABUW_2749 PF13840 ACT domain ABUW_2750 PF02599 Global regulator protein family ABUW_2751 PF01351 Ribonuclease HII ABUW_2753 PF01292 Prokaryotic cytochrome b561 ABUW_2754 PF00962 Adenosine/AMP deaminase ABUW_2755 PF00860 Permease family ABUW_2757 PF00743 Flavin-binding monooxygenase-like ABUW_2758 PF00106 short chain dehydrogenase ABUW_2759 PF10118 ABUW_2759 ABUW_2760 PF02678 Pirin ABUW_2761 PF00440 Bacterial regulatory proteins, tetR family ABUW_2762 PF10118 ABUW_2762 ABUW_2763 PF00106 short chain dehydrogenase ABUW_2764 PF13738 Pyridine nucleotide-disulphide oxidoreductase ABUW_2765 PF04072 Leucine carboxyl methyltransferase ABUW_2766 PF12625 ABUW_2766 ABUW_2766 PF12833 Helix-turn-helix domain ABUW_2767 PF00743 Flavin-binding monooxygenase-like ABUW_2768 PF00106 short chain dehydrogenase ABUW_2769 PF07859 alpha/beta hydrolase fold ABUW_2770 PF00732 GMC oxidoreductase ABUW_2770 PF05199 GMC oxidoreductase ABUW_2771 PF03573 outer membrane porin, OprD family ABUW_2772 PF07690 Major Facilitator Superfamily ABUW_2773 PF00355 Rieske [2Fe-2S] domain ABUW_2774 PF00111 2Fe-2S iron-sulfur cluster binding domain ABUW_2775 PF00392 Bacterial regulatory proteins, gntR family ABUW_2775 PF07729 FCD domain ABUW_2776 PF01047 MarR family ABUW_2777 PF07690 Major Facilitator Superfamily ABUW_2778 PF00378 Enoyl-CoA hydratase/isomerase family ABUW_2779 PF00171 Aldehyde dehydrogenase family ABUW_2780 PF00501 AMP-binding enzyme ABUW_2781 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_2781 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_2781 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_2782 PF03573 outer membrane porin, OprD family ABUW_2783 PF11578 Protein of unknown function (DUF3237) ABUW_2784 PF03061 Thioesterase superfamily ABUW_2785 PF07519 Tannase and feruloyl esterase ABUW_2786 PF00392 Bacterial regulatory proteins, gntR family ABUW_2786 PF07729 FCD domain ABUW_2787 PF00171 Aldehyde dehydrogenase family ABUW_2788 PF00701 Dihydrodipicolinate synthetase family ABUW_2789 PF13378 Enolase C-terminal domain-like ABUW_2790 PF07690 Major Facilitator Superfamily ABUW_2791 PF04295 ABUW_2791 ABUW_2791 PF08666 SAF domain ABUW_2792 PF00892 EamA-like transporter family ABUW_2793 PF12625 ABUW_2793 ABUW_2793 PF12833 Helix-turn-helix domain ABUW_2794 PF00171 Aldehyde dehydrogenase family ABUW_2796 PF14085 ABUW_2796 ABUW_2798 PF00324 Amino acid permease ABUW_2799 PF04958 Arginine N-succinyltransferase beta subunit ABUW_2800 PF00202 Aminotransferase class-III ABUW_2801 PF01037 AsnC family ABUW_2801 PF13404 AsnC-type helix-turn-helix domain ABUW_2802 PF00171 Aldehyde dehydrogenase family ABUW_2803 PF12680 SnoaL-like domain ABUW_2804 PF00392 Bacterial regulatory proteins, gntR family ABUW_2804 PF07729 FCD domain ABUW_2805 PF02743 Cache domain ABUW_2806 PF00324 Amino acid permease ABUW_2807 PF01266 FAD dependent oxidoreductase ABUW_2808 PF00324 Amino acid permease ABUW_2810 PF13086 AAA domain ABUW_2810 PF13087 AAA domain ABUW_2816 PF03527 ABUW_2816 ABUW_2816 PF05593 ABUW_2816 ABUW_2817 PF05954 Phage late control gene D protein (GPD) ABUW_2817 PF10106 ABUW_2817 ABUW_2817 PF13296 ABUW_2817 ABUW_2818 PF00440 Bacterial regulatory proteins, tetR family ABUW_2820 PF03180 NLPA lipoprotein ABUW_2822 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABUW_2822 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_2823 PF00764 Arginosuccinate synthase ABUW_2824 PF00990 GGDEF domain ABUW_2825 PF01979 Amidohydrolase family ABUW_2826 PF00929 Exonuclease ABUW_2828 PF00593 TonB dependent receptor ABUW_2828 PF07715 TonB-dependent Receptor Plug Domain ABUW_2835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABUW_2836 PF00005 ABC transporter ABUW_2837 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2838 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_2839 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABUW_2840 PF01464 Transglycosylase SLT domain ABUW_2840 PF01476 LysM domain ABUW_2841 PF00075 RNase H ABUW_2841 PF00929 Exonuclease ABUW_2843 PF00293 NUDIX domain ABUW_2843 PF09297 NADH pyrophosphatase zinc ribbon domain ABUW_2844 PF07859 alpha/beta hydrolase fold ABUW_2845 PF04972 BON domain ABUW_2846 PF02021 Uncharacterised protein family UPF0102 ABUW_2847 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABUW_2849 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2849 PF03466 LysR substrate binding domain ABUW_2850 PF01810 ABUW_2850 ABUW_2851 PF01545 Cation efflux family ABUW_2852 PF13411 MerR HTH family regulatory protein ABUW_2854 PF01494 FAD binding domain ABUW_2855 PF01494 FAD binding domain ABUW_2856 PF00557 Metallopeptidase family M24 ABUW_2856 PF05195 Aminopeptidase P, N-terminal domain ABUW_2857 PF03695 Uncharacterised protein family (UPF0149) ABUW_2859 PF05164 Cell division protein ZapA ABUW_2863 PF01812 5-formyltetrahydrofolate cyclo-ligase family ABUW_2865 PF00004 ATPase family associated with various cellular activities (AAA) ABUW_2865 PF02190 ATP-dependent protease La (LON) domain ABUW_2865 PF05362 Lon protease (S16) C-terminal proteolytic domain ABUW_2866 PF02590 Predicted SPOUT methyltransferase ABUW_2867 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ABUW_2868 PF03724 META domain ABUW_2868 PF14302 ABUW_2868 ABUW_2869 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABUW_2869 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABUW_2870 PF04060 Putative Fe-S cluster ABUW_2870 PF14697 4Fe-4S dicluster domain ABUW_2871 PF00633 Helix-hairpin-helix motif ABUW_2871 PF00730 HhH-GPD superfamily base excision DNA repair protein ABUW_2871 PF10576 Iron-sulfur binding domain of endonuclease III ABUW_2873 PF00406 Adenylate kinase ABUW_2873 PF05191 Adenylate kinase, active site lid ABUW_2876 PF00905 Penicillin binding protein transpeptidase domain ABUW_2876 PF03717 Penicillin-binding Protein dimerisation domain ABUW_2877 PF03602 Conserved hypothetical protein 95 ABUW_2878 PF04955 ABUW_2878 ABUW_2879 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABUW_2880 PF01730 UreF ABUW_2881 PF02814 UreE urease accessory protein, N-terminal domain ABUW_2881 PF05194 UreE urease accessory protein, C-terminal domain ABUW_2882 PF00449 Urease alpha-subunit, N-terminal domain ABUW_2882 PF01979 Amidohydrolase family ABUW_2883 PF00699 Urease beta subunit ABUW_2884 PF00547 Urease, gamma subunit ABUW_2885 PF01774 UreD urease accessory protein ABUW_2887 PF04170 NlpE N-terminal domain ABUW_2888 PF00463 Isocitrate lyase family ABUW_2889 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2889 PF03466 LysR substrate binding domain ABUW_2890 PF00571 CBS domain ABUW_2890 PF01595 ABUW_2890 ABUW_2890 PF03471 Transporter associated domain ABUW_2892 PF03600 Citrate transporter ABUW_2894 PF09998 ABUW_2894 ABUW_2895 PF00009 Elongation factor Tu GTP binding domain ABUW_2896 PF01507 Phosphoadenosine phosphosulfate reductase family ABUW_2898 PF14052 Capsule assembly protein Wzi ABUW_2899 PF00152 tRNA synthetases class II (D, K and N) ABUW_2899 PF01336 OB-fold nucleic acid binding domain ABUW_2900 PF05728 Uncharacterised protein family (UPF0227) ABUW_2901 PF08327 Activator of Hsp90 ATPase homolog 1-like protein ABUW_2902 PF00301 Rubredoxin ABUW_2903 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_2904 PF00561 alpha/beta hydrolase fold ABUW_2905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2905 PF03466 LysR substrate binding domain ABUW_2906 PF05036 Sporulation related domain ABUW_2907 PF02503 Polyphosphate kinase middle domain ABUW_2907 PF13089 Polyphosphate kinase N-terminal domain ABUW_2907 PF13090 Polyphosphate kinase C-terminal domain ABUW_2908 PF00912 Transglycosylase ABUW_2909 PF01694 Rhomboid family ABUW_2910 PF02687 ABUW_2910 ABUW_2911 PF00005 ABC transporter ABUW_2912 PF13472 GDSL-like Lipase/Acylhydrolase family ABUW_2913 PF00484 Carbonic anhydrase ABUW_2914 PF12697 Alpha/beta hydrolase family ABUW_2916 PF00593 TonB dependent receptor ABUW_2916 PF07715 TonB-dependent Receptor Plug Domain ABUW_2917 PF01106 NifU-like domain ABUW_2917 PF01521 Iron-sulphur cluster biosynthesis ABUW_2918 PF01694 Rhomboid family ABUW_2920 PF00884 Sulfatase ABUW_2921 PF03781 Sulfatase-modifying factor enzyme 1 ABUW_2924 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_2925 PF01384 ABUW_2925 ABUW_2926 PF00809 Pterin binding enzyme ABUW_2926 PF02310 B12 binding domain ABUW_2926 PF02574 Homocysteine S-methyltransferase ABUW_2926 PF02607 B12 binding domain ABUW_2926 PF02965 Vitamin B12 dependent methionine synthase, activation domain ABUW_2927 PF02779 Transketolase, pyrimidine binding domain ABUW_2927 PF02780 Transketolase, C-terminal domain ABUW_2928 PF00456 Transketolase, thiamine diphosphate binding domain ABUW_2929 PF07690 Major Facilitator Superfamily ABUW_2930 PF13561 Enoyl-(Acyl carrier protein) reductase ABUW_2931 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2931 PF03466 LysR substrate binding domain ABUW_2933 PF01263 Aldose 1-epimerase ABUW_2934 PF07690 Major Facilitator Superfamily ABUW_2935 PF12833 Helix-turn-helix domain ABUW_2936 PF04960 Glutaminase ABUW_2937 PF01327 Polypeptide deformylase ABUW_2939 PF07690 Major Facilitator Superfamily ABUW_2941 PF00205 Thiamine pyrophosphate enzyme, central domain ABUW_2941 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABUW_2941 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABUW_2942 PF00171 Aldehyde dehydrogenase family ABUW_2943 PF01958 Domain of unknown function DUF108 ABUW_2943 PF03447 Homoserine dehydrogenase, NAD binding domain ABUW_2944 PF00106 short chain dehydrogenase ABUW_2945 PF12697 Alpha/beta hydrolase family ABUW_2946 PF07883 Cupin domain ABUW_2947 PF07690 Major Facilitator Superfamily ABUW_2948 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_2948 PF14759 Reductase C-terminal ABUW_2949 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABUW_2950 PF13561 Enoyl-(Acyl carrier protein) reductase ABUW_2951 PF00355 Rieske [2Fe-2S] domain ABUW_2953 PF00355 Rieske [2Fe-2S] domain ABUW_2954 PF01614 Bacterial transcriptional regulator ABUW_2954 PF09339 IclR helix-turn-helix domain ABUW_2956 PF04973 ABUW_2956 ABUW_2957 PF00378 Enoyl-CoA hydratase/isomerase family ABUW_2958 PF13994 ABUW_2958 ABUW_2959 PF13641 Glycosyltransferase like family 2 ABUW_2960 PF01522 Polysaccharide deacetylase ABUW_2960 PF14883 Hypothetical glycosyl hydrolase family 13 ABUW_2961 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABUW_2962 PF07152 YaeQ protein ABUW_2963 PF00375 Sodium:dicarboxylate symporter family ABUW_2964 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABUW_2966 PF03061 Thioesterase superfamily ABUW_2967 PF01914 ABUW_2967 ABUW_2968 PF02028 BCCT family transporter ABUW_2969 PF02028 BCCT family transporter ABUW_2970 PF00440 Bacterial regulatory proteins, tetR family ABUW_2970 PF13977 Bacterial transcriptional repressor ABUW_2971 PF00171 Aldehyde dehydrogenase family ABUW_2972 PF00732 GMC oxidoreductase ABUW_2972 PF05199 GMC oxidoreductase ABUW_2973 PF06039 ABUW_2973 ABUW_2975 PF02574 Homocysteine S-methyltransferase ABUW_2976 PF13520 Amino acid permease ABUW_2977 PF12697 Alpha/beta hydrolase family ABUW_2978 PF06912 ABUW_2978 ABUW_2980 PF04304 ABUW_2980 ABUW_2981 PF01126 Heme oxygenase ABUW_2982 PF03544 Gram-negative bacterial TonB protein C-terminal ABUW_2983 PF04575 ABUW_2983 ABUW_2984 PF01298 Transferrin binding protein-like solute binding protein ABUW_2985 PF00593 TonB dependent receptor ABUW_2985 PF07660 Secretin and TonB N terminus short domain ABUW_2985 PF07715 TonB-dependent Receptor Plug Domain ABUW_2986 PF04773 FecR protein ABUW_2986 PF16220 ABUW_2986 ABUW_2986 PF16344 ABUW_2986 ABUW_2987 PF04542 Sigma-70 region 2 ABUW_2987 PF08281 Sigma-70, region 4 ABUW_2988 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_2988 PF03466 LysR substrate binding domain ABUW_2989 PF00701 Dihydrodipicolinate synthetase family ABUW_2990 PF00083 Sugar (and other) transporter ABUW_2991 PF03573 outer membrane porin, OprD family ABUW_2995 PF03235 ABUW_2995 ABUW_2997 PF04851 Type III restriction enzyme, res subunit ABUW_2998 PF01555 DNA methylase ABUW_2999 PF14335 ABUW_2999 ABUW_3000 PF00176 SNF2 family N-terminal domain ABUW_3000 PF00271 Helicase conserved C-terminal domain ABUW_3005 PF02661 Fic/DOC family ABUW_3005 PF13784 Fic/DOC family N-terminal ABUW_3007 PF00436 Single-strand binding protein family ABUW_3008 PF06048 ABUW_3008 ABUW_3013 PF02498 ABUW_3013 ABUW_3014 PF14090 ABUW_3014 ABUW_3017 PF00589 Phage integrase family ABUW_3017 PF13356 Domain of unknown function (DUF4102) ABUW_3018 PF01019 Gamma-glutamyltranspeptidase ABUW_3019 PF07690 Major Facilitator Superfamily ABUW_3020 PF00529 HlyD family secretion protein ABUW_3020 PF16576 ABUW_3020 ABUW_3021 PF03061 Thioesterase superfamily ABUW_3022 PF00490 Delta-aminolevulinic acid dehydratase ABUW_3023 PF01266 FAD dependent oxidoreductase ABUW_3024 PF01370 NAD dependent epimerase/dehydratase family ABUW_3024 PF08338 Domain of unknown function (DUF1731) ABUW_3027 PF02566 OsmC-like protein ABUW_3028 PF00149 Calcineurin-like phosphoesterase ABUW_3028 PF12320 Type 5 capsule protein repressor C-terminal domain ABUW_3029 PF13476 AAA domain ABUW_3029 PF13558 Putative exonuclease SbcCD, C subunit ABUW_3030 PF01168 Alanine racemase, N-terminal domain ABUW_3031 PF00437 Type II/IV secretion system protein ABUW_3032 PF00437 Type II/IV secretion system protein ABUW_3033 PF01475 Ferric uptake regulator family ABUW_3034 PF04355 SmpA / OmlA family ABUW_3035 PF03658 RnfH family Ubiquitin ABUW_3037 PF01814 Hemerythrin HHE cation binding domain ABUW_3038 PF13230 Glutamine amidotransferases class-II ABUW_3039 PF13444 Acetyltransferase (GNAT) domain ABUW_3040 PF00696 Amino acid kinase family ABUW_3041 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABUW_3041 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABUW_3041 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABUW_3042 PF00692 dUTPase ABUW_3043 PF00580 UvrD/REP helicase N-terminal domain ABUW_3043 PF13361 UvrD-like helicase C-terminal domain ABUW_3045 PF00691 OmpA family ABUW_3046 PF01553 Acyltransferase ABUW_3048 PF03775 Septum formation inhibitor MinC, C-terminal domain ABUW_3049 PF13614 AAA domain ABUW_3050 PF03776 Septum formation topological specificity factor MinE ABUW_3052 PF01810 ABUW_3052 ABUW_3053 PF01580 FtsK/SpoIIIE family ABUW_3053 PF09397 Ftsk gamma domain ABUW_3053 PF13491 ABUW_3053 ABUW_3054 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_3055 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ABUW_3056 PF04376 ABUW_3056 ABUW_3056 PF04377 ABUW_3056 ABUW_3057 PF00583 Acetyltransferase (GNAT) family ABUW_3058 PF00182 Chitinase class I ABUW_3058 PF10118 ABUW_3058 ABUW_3059 PF10118 ABUW_3059 ABUW_3060 PF00009 Elongation factor Tu GTP binding domain ABUW_3060 PF03143 Elongation factor Tu C-terminal domain ABUW_3060 PF03144 Elongation factor Tu domain 2 ABUW_3061 PF00009 Elongation factor Tu GTP binding domain ABUW_3061 PF00679 Elongation factor G C-terminus ABUW_3061 PF03144 Elongation factor Tu domain 2 ABUW_3061 PF03764 Elongation factor G, domain IV ABUW_3061 PF14492 Elongation Factor G, domain II ABUW_3062 PF00177 Ribosomal protein S7p/S5e ABUW_3063 PF00164 Ribosomal protein S12/S23 ABUW_3064 PF12787 ABUW_3064 ABUW_3065 PF00109 Beta-ketoacyl synthase, N-terminal domain ABUW_3065 PF02801 Beta-ketoacyl synthase, C-terminal domain ABUW_3066 PF03653 ABUW_3066 ABUW_3067 PF02678 Pirin ABUW_3067 PF05726 Pirin C-terminal cupin domain ABUW_3069 PF00795 Carbon-nitrogen hydrolase ABUW_3069 PF02540 NAD synthase ABUW_3072 PF00111 2Fe-2S iron-sulfur cluster binding domain ABUW_3072 PF00175 Oxidoreductase NAD-binding domain ABUW_3072 PF00970 Oxidoreductase FAD-binding domain ABUW_3073 PF00171 Aldehyde dehydrogenase family ABUW_3074 PF00355 Rieske [2Fe-2S] domain ABUW_3074 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABUW_3075 PF07859 alpha/beta hydrolase fold ABUW_3076 PF02028 BCCT family transporter ABUW_3077 PF00180 Isocitrate/isopropylmalate dehydrogenase ABUW_3078 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3078 PF03466 LysR substrate binding domain ABUW_3079 PF07396 Phosphate-selective porin O and P ABUW_3081 PF00037 4Fe-4S binding domain ABUW_3082 PF01467 Cytidylyltransferase ABUW_3083 PF01668 SmpB protein ABUW_3084 PF03358 NADPH-dependent FMN reductase ABUW_3085 PF02578 Multi-copper polyphenol oxidoreductase laccase ABUW_3086 PF00849 RNA pseudouridylate synthase ABUW_3086 PF01479 S4 domain ABUW_3087 PF13525 Outer membrane lipoprotein ABUW_3088 PF01807 CHC2 zinc finger ABUW_3088 PF08275 DNA primase catalytic core, N-terminal domain ABUW_3088 PF10410 DnaB-helicase binding domain of primase ABUW_3088 PF13662 Toprim domain ABUW_3089 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABUW_3089 PF01488 Shikimate / quinate 5-dehydrogenase ABUW_3089 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABUW_3090 PF13181 Tetratricopeptide repeat ABUW_3090 PF13432 Tetratricopeptide repeat ABUW_3090 PF14559 Tetratricopeptide repeat ABUW_3091 PF03550 Outer membrane lipoprotein LolB ABUW_3092 PF00288 GHMP kinases N terminal domain ABUW_3092 PF08544 GHMP kinases C terminal ABUW_3097 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABUW_3097 PF14572 Phosphoribosyl synthetase-associated domain ABUW_3098 PF01386 Ribosomal L25p family ABUW_3099 PF01195 Peptidyl-tRNA hydrolase ABUW_3100 PF02261 Aspartate decarboxylase ABUW_3101 PF14345 ABUW_3101 ABUW_3102 PF09925 ABUW_3102 ABUW_3102 PF14351 ABUW_3102 ABUW_3103 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABUW_3104 PF13419 Haloacid dehalogenase-like hydrolase ABUW_3105 PF08543 Phosphomethylpyrimidine kinase ABUW_3106 PF01476 LysM domain ABUW_3106 PF04972 BON domain ABUW_3107 PF00550 Phosphopantetheine attachment site ABUW_3108 PF13561 Enoyl-(Acyl carrier protein) reductase ABUW_3109 PF00698 Acyl transferase domain ABUW_3110 PF01783 Ribosomal L32p protein family ABUW_3111 PF02620 ABUW_3111 ABUW_3112 PF04315 ABUW_3112 ABUW_3113 PF01300 Telomere recombination ABUW_3114 PF02616 ScpA/B protein ABUW_3115 PF04079 Putative transcriptional regulators (Ypuh-like) ABUW_3116 PF00849 RNA pseudouridylate synthase ABUW_3116 PF01479 S4 domain ABUW_3117 PF13500 AAA domain ABUW_3118 PF13489 Methyltransferase domain ABUW_3119 PF00155 Aminotransferase class I and II ABUW_3120 PF00202 Aminotransferase class-III ABUW_3121 PF12697 Alpha/beta hydrolase family ABUW_3122 PF02358 Trehalose-phosphatase ABUW_3123 PF00982 Glycosyltransferase family 20 ABUW_3124 PF07690 Major Facilitator Superfamily ABUW_3125 PF00210 Ferritin-like domain ABUW_3127 PF00533 BRCA1 C Terminus (BRCT) domain ABUW_3127 PF01653 NAD-dependent DNA ligase adenylation domain ABUW_3127 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ABUW_3127 PF03120 NAD-dependent DNA ligase OB-fold domain ABUW_3127 PF12826 Helix-hairpin-helix motif ABUW_3127 PF14520 Helix-hairpin-helix domain ABUW_3128 PF04354 ZipA, C-terminal FtsZ-binding domain ABUW_3129 PF02463 RecF/RecN/SMC N terminal domain ABUW_3130 PF00392 Bacterial regulatory proteins, gntR family ABUW_3130 PF07729 FCD domain ABUW_3131 PF01925 ABUW_3131 ABUW_3132 PF03099 Biotin/lipoate A/B protein ligase family ABUW_3133 PF03309 Type III pantothenate kinase ABUW_3134 PF00448 SRP54-type protein, GTPase domain ABUW_3134 PF02881 SRP54-type protein, helical bundle domain ABUW_3134 PF02978 Signal peptide binding domain ABUW_3135 PF01578 ABUW_3135 ABUW_3136 PF01207 Dihydrouridine synthase (Dus) ABUW_3142 PF00692 dUTPase ABUW_3143 PF01810 ABUW_3143 ABUW_3144 PF09835 ABUW_3144 ABUW_3145 PF01048 Phosphorylase superfamily ABUW_3146 PF10609 ParA/MinD ATPase like ABUW_3148 PF01588 Putative tRNA binding domain ABUW_3148 PF08264 Anticodon-binding domain of tRNA ABUW_3148 PF09334 tRNA synthetases class I (M) ABUW_3150 PF01810 ABUW_3150 ABUW_3151 PF00440 Bacterial regulatory proteins, tetR family ABUW_3152 PF07690 Major Facilitator Superfamily ABUW_3153 PF13437 HlyD family secretion protein ABUW_3153 PF13533 Biotin-lipoyl like ABUW_3154 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_3155 PF03486 HI0933-like protein ABUW_3157 PF05552 Conserved TM helix ABUW_3160 PF00175 Oxidoreductase NAD-binding domain ABUW_3160 PF00970 Oxidoreductase FAD-binding domain ABUW_3161 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3161 PF03466 LysR substrate binding domain ABUW_3162 PF05901 ABUW_3162 ABUW_3163 PF00313 'Cold-shock' DNA-binding domain ABUW_3164 PF14681 Uracil phosphoribosyltransferase ABUW_3165 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ABUW_3166 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ABUW_3167 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ABUW_3167 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABUW_3168 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABUW_3169 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ABUW_3170 PF12838 4Fe-4S dicluster domain ABUW_3171 PF00146 NADH dehydrogenase ABUW_3172 PF00384 Molybdopterin oxidoreductase ABUW_3172 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABUW_3172 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABUW_3172 PF13510 2Fe-2S iron-sulfur cluster binding domain ABUW_3173 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABUW_3173 PF10531 SLBB domain ABUW_3173 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABUW_3174 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin ABUW_3175 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ABUW_3175 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABUW_3176 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABUW_3177 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABUW_3178 PF00990 GGDEF domain ABUW_3180 PF00512 His Kinase A (phospho-acceptor) domain ABUW_3180 PF00672 HAMP domain ABUW_3180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_3181 PF00072 Response regulator receiver domain ABUW_3181 PF00486 Transcriptional regulatory protein, C terminal ABUW_3183 PF00317 Ribonucleotide reductase, all-alpha domain ABUW_3183 PF02867 Ribonucleotide reductase, barrel domain ABUW_3183 PF03477 ATP cone domain ABUW_3185 PF00268 Ribonucleotide reductase, small chain ABUW_3188 PF02567 Phenazine biosynthesis-like protein ABUW_3189 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3189 PF03466 LysR substrate binding domain ABUW_3194 PF00440 Bacterial regulatory proteins, tetR family ABUW_3196 PF01613 Flavin reductase like domain ABUW_3197 PF01717 Cobalamin-independent synthase, Catalytic domain ABUW_3198 PF08908 ABUW_3198 ABUW_3199 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3199 PF03466 LysR substrate binding domain ABUW_3201 PF01810 ABUW_3201 ABUW_3203 PF12625 ABUW_3203 ABUW_3203 PF12833 Helix-turn-helix domain ABUW_3204 PF01546 Peptidase family M20/M25/M40 ABUW_3204 PF07687 Peptidase dimerisation domain ABUW_3206 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3206 PF03466 LysR substrate binding domain ABUW_3207 PF07690 Major Facilitator Superfamily ABUW_3208 PF13531 Bacterial extracellular solute-binding protein ABUW_3209 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3209 PF03466 LysR substrate binding domain ABUW_3210 PF00890 FAD binding domain ABUW_3212 PF02515 CoA-transferase family III ABUW_3213 PF07690 Major Facilitator Superfamily ABUW_3214 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_3214 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_3214 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_3215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3215 PF03466 LysR substrate binding domain ABUW_3216 PF00107 Zinc-binding dehydrogenase ABUW_3216 PF08240 Alcohol dehydrogenase GroES-like domain ABUW_3217 PF00962 Adenosine/AMP deaminase ABUW_3222 PF02445 Quinolinate synthetase A protein ABUW_3223 PF01960 ArgJ family ABUW_3224 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABUW_3224 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABUW_3225 PF00893 Small Multidrug Resistance protein ABUW_3226 PF01545 Cation efflux family ABUW_3227 PF05275 ABUW_3227 ABUW_3228 PF00394 Multicopper oxidase ABUW_3228 PF07731 Multicopper oxidase ABUW_3228 PF07732 Multicopper oxidase ABUW_3230 PF08282 haloacid dehalogenase-like hydrolase ABUW_3231 PF00834 Ribulose-phosphate 3 epimerase family ABUW_3232 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) ABUW_3233 PF00756 Putative esterase ABUW_3234 PF01650 Peptidase C13 family ABUW_3235 PF04445 Putative SAM-dependent methyltransferase ABUW_3236 PF00814 Glycoprotease family ABUW_3237 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_3238 PF00293 NUDIX domain ABUW_3239 PF00293 NUDIX domain ABUW_3239 PF14803 Nudix N-terminal ABUW_3242 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ABUW_3246 PF00425 chorismate binding enzyme ABUW_3246 PF04715 Anthranilate synthase component I, N terminal region ABUW_3247 PF00155 Aminotransferase class I and II ABUW_3248 PF00815 Histidinol dehydrogenase ABUW_3249 PF01634 ATP phosphoribosyltransferase ABUW_3250 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABUW_3251 PF01722 BolA-like protein ABUW_3252 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABUW_3253 PF00309 ABUW_3253 ABUW_3253 PF04552 Sigma-54, DNA binding domain ABUW_3253 PF04963 Sigma-54 factor, core binding domain ABUW_3259 PF04333 ABUW_3259 ABUW_3260 PF07228 Stage II sporulation protein E (SpoIIE) ABUW_3261 PF01740 STAS domain ABUW_3262 PF00795 Carbon-nitrogen hydrolase ABUW_3263 PF16309 ABUW_3263 ABUW_3264 PF01047 MarR family ABUW_3265 PF02566 OsmC-like protein ABUW_3266 PF00437 Type II/IV secretion system protein ABUW_3268 PF00924 Mechanosensitive ion channel ABUW_3269 PF10101 ABUW_3269 ABUW_3270 PF00476 DNA polymerase family A ABUW_3270 PF01367 5'-3' exonuclease, C-terminal SAM fold ABUW_3270 PF01612 3'-5' exonuclease ABUW_3270 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABUW_3271 PF02325 ABUW_3271 ABUW_3272 PF03807 NADP oxidoreductase coenzyme F420-dependent ABUW_3272 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABUW_3273 PF01171 PP-loop family ABUW_3273 PF09179 TilS substrate binding domain ABUW_3273 PF11734 TilS substrate C-terminal domain ABUW_3274 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABUW_3275 PF01966 HD domain ABUW_3275 PF02541 Ppx/GppA phosphatase family ABUW_3276 PF00085 Thioredoxin ABUW_3277 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABUW_3277 PF07497 Rho termination factor, RNA-binding domain ABUW_3277 PF07498 Rho termination factor, N-terminal domain ABUW_3279 PF00216 Bacterial DNA-binding protein ABUW_3280 PF01588 Putative tRNA binding domain ABUW_3280 PF03147 Ferredoxin-fold anticodon binding domain ABUW_3280 PF03483 B3/4 domain ABUW_3280 PF03484 tRNA synthetase B5 domain ABUW_3281 PF01409 tRNA synthetases class II core domain (F) ABUW_3281 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABUW_3284 PF00453 Ribosomal protein L20 ABUW_3285 PF01632 Ribosomal protein L35 ABUW_3286 PF05977 Transmembrane secretion effector ABUW_3287 PF09335 ABUW_3287 ABUW_3288 PF00043 Glutathione S-transferase, C-terminal domain ABUW_3288 PF02798 Glutathione S-transferase, N-terminal domain ABUW_3289 PF00707 Translation initiation factor IF-3, C-terminal domain ABUW_3290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABUW_3290 PF02824 TGS domain ABUW_3290 PF03129 Anticodon binding domain ABUW_3290 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABUW_3291 PF00501 AMP-binding enzyme ABUW_3291 PF13193 AMP-binding enzyme C-terminal domain ABUW_3292 PF04751 Protein of unknown function (DUF615) ABUW_3293 PF00381 PTS HPr component phosphorylation site ABUW_3294 PF03668 ABUW_3294 ABUW_3295 PF02569 Pantoate-beta-alanine ligase ABUW_3296 PF02548 Ketopantoate hydroxymethyltransferase ABUW_3297 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABUW_3298 PF01743 Poly A polymerase head domain ABUW_3298 PF12626 Polymerase A arginine-rich C-terminus ABUW_3298 PF12627 Probable RNA and SrmB- binding site of polymerase A ABUW_3299 PF12836 Helix-hairpin-helix motif ABUW_3300 PF03819 MazG nucleotide pyrophosphohydrolase domain ABUW_3301 PF00106 short chain dehydrogenase ABUW_3302 PF02824 TGS domain ABUW_3302 PF04607 Region found in RelA / SpoT proteins ABUW_3302 PF13291 ACT domain ABUW_3302 PF13328 HD domain ABUW_3303 PF05958 tRNA (Uracil-5-)-methyltransferase ABUW_3304 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB ABUW_3305 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_3306 PF00072 Response regulator receiver domain ABUW_3306 PF00512 His Kinase A (phospho-acceptor) domain ABUW_3306 PF01627 Hpt domain ABUW_3306 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_3307 PF00378 Enoyl-CoA hydratase/isomerase family ABUW_3308 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABUW_3308 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABUW_3309 PF01261 Xylose isomerase-like TIM barrel ABUW_3310 PF02410 Oligomerisation domain ABUW_3311 PF00106 short chain dehydrogenase ABUW_3312 PF02233 NAD(P) transhydrogenase beta subunit ABUW_3313 PF12769 Domain of unknown function (DUF3814) ABUW_3314 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABUW_3314 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ABUW_3315 PF00892 EamA-like transporter family ABUW_3316 PF01042 Endoribonuclease L-PSP ABUW_3317 PF07690 Major Facilitator Superfamily ABUW_3319 PF01381 Helix-turn-helix ABUW_3319 PF06114 Domain of unknown function (DUF955) ABUW_3320 PF05275 ABUW_3320 ABUW_3321 PF00394 Multicopper oxidase ABUW_3321 PF07731 Multicopper oxidase ABUW_3321 PF07732 Multicopper oxidase ABUW_3323 PF00072 Response regulator receiver domain ABUW_3323 PF00486 Transcriptional regulatory protein, C terminal ABUW_3324 PF00512 His Kinase A (phospho-acceptor) domain ABUW_3324 PF00672 HAMP domain ABUW_3324 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_3325 PF00122 E1-E2 ATPase ABUW_3325 PF00702 haloacid dehalogenase-like hydrolase ABUW_3325 PF04945 YHS domain ABUW_3326 PF04234 CopC domain ABUW_3327 PF05425 ABUW_3327 ABUW_3328 PF06067 ABUW_3328 ABUW_3338 PF11726 ABUW_3338 ABUW_3340 PF11112 ABUW_3340 ABUW_3341 PF00589 Phage integrase family ABUW_3342 PF01207 Dihydrouridine synthase (Dus) ABUW_3344 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3344 PF03466 LysR substrate binding domain ABUW_3345 PF00899 ThiF family ABUW_3346 PF00330 Aconitase family (aconitate hydratase) ABUW_3346 PF00694 Aconitase C-terminal domain ABUW_3347 PF01026 TatD related DNase ABUW_3348 PF11738 Protein of unknown function (DUF3298) ABUW_3350 PF00009 Elongation factor Tu GTP binding domain ABUW_3350 PF16658 ABUW_3350 ABUW_3352 PF00440 Bacterial regulatory proteins, tetR family ABUW_3353 PF00440 Bacterial regulatory proteins, tetR family ABUW_3354 PF00563 EAL domain ABUW_3354 PF00990 GGDEF domain ABUW_3355 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABUW_3355 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain ABUW_3356 PF10369 Small subunit of acetolactate synthase ABUW_3356 PF13710 ACT domain ABUW_3357 PF00205 Thiamine pyrophosphate enzyme, central domain ABUW_3357 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABUW_3357 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABUW_3358 PF13511 ABUW_3358 ABUW_3359 PF00133 tRNA synthetases class I (I, L, M and V) ABUW_3359 PF08264 Anticodon-binding domain of tRNA ABUW_3359 PF09334 tRNA synthetases class I (M) ABUW_3359 PF13603 Leucyl-tRNA synthetase, Domain 2 ABUW_3361 PF06144 DNA polymerase III, delta subunit ABUW_3362 PF16576 ABUW_3362 ABUW_3363 PF00005 ABC transporter ABUW_3363 PF02687 ABUW_3363 ABUW_3363 PF12704 MacB-like periplasmic core domain ABUW_3364 PF02321 Outer membrane efflux protein ABUW_3365 PF13561 Enoyl-(Acyl carrier protein) reductase ABUW_3366 PF12811 ABUW_3366 ABUW_3367 PF00929 Exonuclease ABUW_3368 PF03193 Protein of unknown function, DUF258 ABUW_3369 PF00581 Rhodanese-like domain ABUW_3370 PF00462 Glutaredoxin ABUW_3371 PF02556 Preprotein translocase subunit SecB ABUW_3372 PF01648 4'-phosphopantetheinyl transferase superfamily ABUW_3373 PF01926 50S ribosome-binding GTPase ABUW_3373 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABUW_3374 PF13360 PQQ-like domain ABUW_3375 PF09976 Tetratricopeptide repeat ABUW_3376 PF03129 Anticodon binding domain ABUW_3376 PF13393 Histidyl-tRNA synthetase ABUW_3377 PF04551 GcpE protein ABUW_3378 PF13413 Helix-turn-helix domain ABUW_3378 PF13464 ABUW_3378 ABUW_3379 PF13432 Tetratricopeptide repeat ABUW_3380 PF04055 Radical SAM superfamily ABUW_3381 PF00334 Nucleoside diphosphate kinase ABUW_3382 PF04384 Iron-sulphur cluster assembly ABUW_3383 PF01569 PAP2 superfamily ABUW_3384 PF00534 Glycosyl transferases group 1 ABUW_3384 PF13439 Glycosyltransferase Family 4 ABUW_3385 PF00595 PDZ domain (Also known as DHR or GLGF) ABUW_3385 PF03572 Peptidase family S41 ABUW_3385 PF11818 ABUW_3385 ABUW_3386 PF00933 Glycosyl hydrolase family 3 N terminal domain ABUW_3387 PF04072 Leucine carboxyl methyltransferase ABUW_3388 PF00561 alpha/beta hydrolase fold ABUW_3389 PF00171 Aldehyde dehydrogenase family ABUW_3390 PF00171 Aldehyde dehydrogenase family ABUW_3391 PF01202 Shikimate kinase ABUW_3392 PF02447 ABUW_3392 ABUW_3393 PF01081 KDPG and KHG aldolase ABUW_3394 PF00920 Dehydratase family ABUW_3395 PF00871 Acetokinase family ABUW_3396 PF01515 Phosphate acetyl/butaryl transferase ABUW_3396 PF07085 DRTGG domain ABUW_3396 PF13500 AAA domain ABUW_3397 PF05681 ABUW_3397 ABUW_3397 PF05683 Fumarase C-terminus ABUW_3398 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) ABUW_3399 PF11008 ABUW_3399 ABUW_3400 PF06689 ClpX C4-type zinc finger ABUW_3400 PF07724 AAA domain (Cdc48 subfamily) ABUW_3400 PF10431 C-terminal, D2-small domain, of ClpB protein ABUW_3401 PF00574 Clp protease ABUW_3402 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABUW_3402 PF05697 Bacterial trigger factor protein (TF) ABUW_3402 PF05698 Bacterial trigger factor protein (TF) C-terminus ABUW_3403 PF00593 TonB dependent receptor ABUW_3403 PF07715 TonB-dependent Receptor Plug Domain ABUW_3404 PF13640 2OG-Fe(II) oxygenase superfamily ABUW_3405 PF00682 HMGL-like ABUW_3405 PF08502 LeuA allosteric (dimerisation) domain ABUW_3406 PF00561 alpha/beta hydrolase fold ABUW_3407 PF07021 Methionine biosynthesis protein MetW ABUW_3408 PF08238 Sel1 repeat ABUW_3409 PF01725 Ham1 family ABUW_3411 PF02416 mttA/Hcf106 family ABUW_3412 PF02416 mttA/Hcf106 family ABUW_3413 PF00902 Sec-independent protein translocase protein (TatC) ABUW_3414 PF05787 Bacterial protein of unknown function (DUF839) ABUW_3415 PF05787 Bacterial protein of unknown function (DUF839) ABUW_3416 PF05742 ABUW_3416 ABUW_3417 PF01790 ABUW_3417 ABUW_3420 PF00303 Thymidylate synthase ABUW_3421 PF00186 Dihydrofolate reductase ABUW_3422 PF13387 ABUW_3422 ABUW_3423 PF01625 Peptide methionine sulfoxide reductase ABUW_3424 PF02472 Biopolymer transport protein ExbD/TolR ABUW_3425 PF01618 ABUW_3425 ABUW_3426 PF03544 Gram-negative bacterial TonB protein C-terminal ABUW_3427 PF00551 Formyl transferase ABUW_3427 PF01842 ACT domain ABUW_3428 PF00440 Bacterial regulatory proteins, tetR family ABUW_3428 PF13972 Bacterial transcriptional repressor ABUW_3429 PF00171 Aldehyde dehydrogenase family ABUW_3430 PF00830 Ribosomal L28 family ABUW_3431 PF00471 Ribosomal protein L33 ABUW_3432 PF00999 Sodium/hydrogen exchanger family ABUW_3432 PF02254 TrkA-N domain ABUW_3435 PF04266 ASCH domain ABUW_3436 PF00076 RNA recognition motif ABUW_3437 PF00580 UvrD/REP helicase N-terminal domain ABUW_3437 PF13361 UvrD-like helicase C-terminal domain ABUW_3438 PF03729 ABUW_3438 ABUW_3440 PF01131 DNA topoisomerase ABUW_3440 PF01396 ABUW_3440 ABUW_3440 PF01751 Toprim domain ABUW_3440 PF08272 Topoisomerase I zinc-ribbon-like ABUW_3442 PF01638 HxlR-like helix-turn-helix ABUW_3443 PF08240 Alcohol dehydrogenase GroES-like domain ABUW_3443 PF13602 Zinc-binding dehydrogenase ABUW_3444 PF04102 SlyX ABUW_3445 PF00005 ABC transporter ABUW_3445 PF12848 ABC transporter ABUW_3445 PF16326 ABUW_3445 ABUW_3446 PF01810 ABUW_3446 ABUW_3447 PF03279 ABUW_3447 ABUW_3448 PF00534 Glycosyl transferases group 1 ABUW_3448 PF13439 Glycosyltransferase Family 4 ABUW_3449 PF00375 Sodium:dicarboxylate symporter family ABUW_3450 PF03372 Endonuclease/Exonuclease/phosphatase family ABUW_3451 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABUW_3451 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABUW_3454 PF00710 Asparaginase ABUW_3455 PF01416 tRNA pseudouridine synthase ABUW_3456 PF12625 ABUW_3456 ABUW_3456 PF12833 Helix-turn-helix domain ABUW_3457 PF01176 Translation initiation factor 1A / IF-1 ABUW_3458 PF07007 Protein of unknown function (DUF1311) ABUW_3460 PF00180 Isocitrate/isopropylmalate dehydrogenase ABUW_3462 PF00694 Aconitase C-terminal domain ABUW_3463 PF00330 Aconitase family (aconitate hydratase) ABUW_3464 PF09834 ABUW_3464 ABUW_3465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3465 PF03466 LysR substrate binding domain ABUW_3466 PF12710 haloacid dehalogenase-like hydrolase ABUW_3467 PF00293 NUDIX domain ABUW_3468 PF00391 PEP-utilising enzyme, mobile domain ABUW_3468 PF02896 PEP-utilising enzyme, TIM barrel domain ABUW_3468 PF05524 PEP-utilising enzyme, N-terminal ABUW_3468 PF13185 GAF domain ABUW_3469 PF00141 Peroxidase ABUW_3470 PF12706 Beta-lactamase superfamily domain ABUW_3471 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3471 PF03466 LysR substrate binding domain ABUW_3472 PF07077 ABUW_3472 ABUW_3473 PF02798 Glutathione S-transferase, N-terminal domain ABUW_3473 PF14497 Glutathione S-transferase, C-terminal domain ABUW_3474 PF08279 HTH domain ABUW_3474 PF13280 ABUW_3474 ABUW_3475 PF13419 Haloacid dehalogenase-like hydrolase ABUW_3476 PF00849 RNA pseudouridylate synthase ABUW_3476 PF01479 S4 domain ABUW_3478 PF00575 S1 RNA binding domain ABUW_3478 PF10150 Ribonuclease E/G family ABUW_3479 PF00501 AMP-binding enzyme ABUW_3479 PF13193 AMP-binding enzyme C-terminal domain ABUW_3482 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3482 PF03466 LysR substrate binding domain ABUW_3483 PF13561 Enoyl-(Acyl carrier protein) reductase ABUW_3484 PF04055 Radical SAM superfamily ABUW_3484 PF06969 HemN C-terminal domain ABUW_3485 PF04657 ABUW_3485 ABUW_3486 PF01554 MatE ABUW_3487 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABUW_3488 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_3488 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_3488 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABUW_3489 PF03109 ABUW_3489 ABUW_3490 PF01197 Ribosomal protein L31 ABUW_3491 PF08888 HopJ type III effector protein ABUW_3492 PF02537 ABUW_3492 ABUW_3493 PF04828 Glutathione-dependent formaldehyde-activating enzyme ABUW_3494 PF03486 HI0933-like protein ABUW_3495 PF02390 Putative methyltransferase ABUW_3496 PF03884 Domain of unknown function (DUF329) ABUW_3497 PF00753 Metallo-beta-lactamase superfamily ABUW_3498 PF00762 Ferrochelatase ABUW_3499 PF13271 ABUW_3499 ABUW_3500 PF01177 Asp/Glu/Hydantoin racemase ABUW_3501 PF06938 Protein of unknown function (DUF1285) ABUW_3502 PF01946 Thi4 family ABUW_3502 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase ABUW_3504 PF01206 Sulfurtransferase TusA ABUW_3505 PF00571 CBS domain ABUW_3505 PF03471 Transporter associated domain ABUW_3506 PF00795 Carbon-nitrogen hydrolase ABUW_3507 PF01588 Putative tRNA binding domain ABUW_3509 PF07963 Prokaryotic N-terminal methylation motif ABUW_3509 PF08334 Type II secretion system (T2SS), protein G ABUW_3510 PF00482 Type II secretion system (T2SS), protein F ABUW_3511 PF00271 Helicase conserved C-terminal domain ABUW_3511 PF04851 Type III restriction enzyme, res subunit ABUW_3512 PF00999 Sodium/hydrogen exchanger family ABUW_3512 PF02254 TrkA-N domain ABUW_3513 PF01430 Hsp33 protein ABUW_3514 PF01810 ABUW_3514 ABUW_3515 PF00226 DnaJ domain ABUW_3515 PF01556 DnaJ C terminal domain ABUW_3516 PF13591 MerR HTH family regulatory protein ABUW_3517 PF01544 CorA-like Mg2+ transporter protein ABUW_3518 PF00013 KH domain ABUW_3518 PF00575 S1 RNA binding domain ABUW_3518 PF01138 3' exoribonuclease family, domain 1 ABUW_3518 PF03725 3' exoribonuclease family, domain 2 ABUW_3518 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABUW_3519 PF00312 Ribosomal protein S15 ABUW_3520 PF00144 Beta-lactamase ABUW_3521 PF13538 UvrD-like helicase C-terminal domain ABUW_3521 PF13604 AAA domain ABUW_3522 PF00580 UvrD/REP helicase N-terminal domain ABUW_3522 PF12705 PD-(D/E)XK nuclease superfamily ABUW_3522 PF13361 UvrD-like helicase C-terminal domain ABUW_3523 PF04257 Exodeoxyribonuclease V, gamma subunit ABUW_3525 PF03976 Polyphosphate kinase 2 (PPK2) ABUW_3527 PF01209 ubiE/COQ5 methyltransferase family ABUW_3529 PF03109 ABUW_3529 ABUW_3530 PF01494 FAD binding domain ABUW_3531 PF01502 Phosphoribosyl-AMP cyclohydrolase ABUW_3531 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ABUW_3532 PF13245 Part of AAA domain ABUW_3532 PF13361 UvrD-like helicase C-terminal domain ABUW_3533 PF13476 AAA domain ABUW_3534 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ABUW_3534 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABUW_3534 PF04039 ABUW_3534 ABUW_3534 PF13244 ABUW_3534 ABUW_3535 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABUW_3536 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ABUW_3537 PF01899 ABUW_3537 ABUW_3538 PF04066 ABUW_3538 ABUW_3539 PF03334 ABUW_3539 ABUW_3540 PF02033 Ribosome-binding factor A ABUW_3541 PF00009 Elongation factor Tu GTP binding domain ABUW_3541 PF04760 Translation initiation factor IF-2, N-terminal region ABUW_3541 PF08364 ABUW_3541 ABUW_3541 PF11987 Translation-initiation factor 2 ABUW_3542 PF08529 NusA N-terminal domain ABUW_3542 PF13184 NusA-like KH domain ABUW_3542 PF14520 Helix-hairpin-helix domain ABUW_3543 PF02576 Uncharacterised BCR, YhbC family COG0779 ABUW_3543 PF17384 ABUW_3543 ABUW_3547 PF03840 Preprotein translocase SecG subunit ABUW_3548 PF00121 Triosephosphate isomerase ABUW_3549 PF00437 Type II/IV secretion system protein ABUW_3549 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ABUW_3550 PF00482 Type II secretion system (T2SS), protein F ABUW_3551 PF01478 Type IV leader peptidase family ABUW_3551 PF06750 ABUW_3551 ABUW_3552 PF01121 Dephospho-CoA kinase ABUW_3553 PF00892 EamA-like transporter family ABUW_3554 PF00588 SpoU rRNA Methylase family ABUW_3554 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABUW_3555 PF06865 Protein of unknown function (DUF1255) ABUW_3557 PF02463 RecF/RecN/SMC N terminal domain ABUW_3558 PF02622 Uncharacterized ACR, COG1678 ABUW_3559 PF03652 Uncharacterised protein family (UPF0081) ABUW_3560 PF13437 HlyD family secretion protein ABUW_3560 PF13533 Biotin-lipoyl like ABUW_3561 PF07869 ABUW_3561 ABUW_3562 PF04632 ABUW_3562 ABUW_3563 PF01614 Bacterial transcriptional regulator ABUW_3564 PF13532 2OG-Fe(II) oxygenase superfamily ABUW_3565 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABUW_3565 PF12833 Helix-turn-helix domain ABUW_3566 PF01066 CDP-alcohol phosphatidyltransferase ABUW_3567 PF13622 Thioesterase-like superfamily ABUW_3568 PF01541 GIY-YIG catalytic domain ABUW_3568 PF02151 UvrB/uvrC motif ABUW_3568 PF08459 UvrC Helix-hairpin-helix N-terminal ABUW_3568 PF14520 Helix-hairpin-helix domain ABUW_3570 PF05118 Aspartyl/Asparaginyl beta-hydroxylase ABUW_3572 PF00378 Enoyl-CoA hydratase/isomerase family ABUW_3572 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABUW_3572 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABUW_3573 PF00108 Thiolase, N-terminal domain ABUW_3573 PF02803 Thiolase, C-terminal domain ABUW_3575 PF06821 Serine hydrolase ABUW_3576 PF13411 MerR HTH family regulatory protein ABUW_3578 PF01323 DSBA-like thioredoxin domain ABUW_3581 PF00183 Hsp90 protein ABUW_3581 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_3582 PF07007 Protein of unknown function (DUF1311) ABUW_3583 PF03922 OmpW family ABUW_3584 PF03553 ABUW_3584 ABUW_3584 PF13726 ABUW_3584 ABUW_3585 PF00561 alpha/beta hydrolase fold ABUW_3586 PF14539 Domain of unknown function (DUF4442) ABUW_3587 PF13441 ABUW_3587 ABUW_3589 PF00623 RNA polymerase Rpb1, domain 2 ABUW_3589 PF04983 RNA polymerase Rpb1, domain 3 ABUW_3589 PF04997 RNA polymerase Rpb1, domain 1 ABUW_3589 PF04998 RNA polymerase Rpb1, domain 5 ABUW_3589 PF05000 RNA polymerase Rpb1, domain 4 ABUW_3590 PF00562 RNA polymerase Rpb2, domain 6 ABUW_3590 PF04560 RNA polymerase Rpb2, domain 7 ABUW_3590 PF04561 RNA polymerase Rpb2, domain 2 ABUW_3590 PF04563 RNA polymerase beta subunit ABUW_3590 PF04565 RNA polymerase Rpb2, domain 3 ABUW_3590 PF10385 RNA polymerase beta subunit external 1 domain ABUW_3591 PF00542 Ribosomal protein L7/L12 C-terminal domain ABUW_3591 PF16320 ABUW_3591 ABUW_3592 PF00466 Ribosomal protein L10 ABUW_3593 PF00687 Ribosomal protein L1p/L10e family ABUW_3594 PF00298 Ribosomal protein L11, RNA binding domain ABUW_3594 PF03946 Ribosomal protein L11, N-terminal domain ABUW_3595 PF02357 Transcription termination factor nusG ABUW_3596 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ABUW_3598 PF00009 Elongation factor Tu GTP binding domain ABUW_3598 PF03143 Elongation factor Tu C-terminal domain ABUW_3598 PF03144 Elongation factor Tu domain 2 ABUW_3603 PF00425 chorismate binding enzyme ABUW_3603 PF04715 Anthranilate synthase component I, N terminal region ABUW_3604 PF13419 Haloacid dehalogenase-like hydrolase ABUW_3605 PF00498 FHA domain ABUW_3606 PF00263 ABUW_3606 ABUW_3606 PF03958 Bacterial type II/III secretion system short domain ABUW_3607 PF11356 Type IV pilus biogenesis ABUW_3608 PF01203 ABUW_3608 ABUW_3609 PF00816 H-NS histone family ABUW_3610 PF13279 Thioesterase-like superfamily ABUW_3613 PF02602 Uroporphyrinogen-III synthase HemD ABUW_3614 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABUW_3614 PF03900 Porphobilinogen deaminase, C-terminal domain ABUW_3615 PF00072 Response regulator receiver domain ABUW_3615 PF04397 LytTr DNA-binding domain ABUW_3616 PF06580 ABUW_3616 ABUW_3617 PF00206 Lyase ABUW_3617 PF14698 Argininosuccinate lyase C-terminal ABUW_3618 PF04362 Bacterial Fe(2+) trafficking ABUW_3619 PF01895 PhoU domain ABUW_3620 PF02321 Outer membrane efflux protein ABUW_3621 PF00892 EamA-like transporter family ABUW_3622 PF00440 Bacterial regulatory proteins, tetR family ABUW_3624 PF01964 ThiC family ABUW_3624 PF13667 ThiC-associated domain ABUW_3626 PF00149 Calcineurin-like phosphoesterase ABUW_3627 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABUW_3628 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABUW_3629 PF01098 ABUW_3629 ABUW_3630 PF02875 Mur ligase family, glutamate ligase domain ABUW_3630 PF08245 Mur ligase middle domain ABUW_3632 PF02421 Ferrous iron transport protein B ABUW_3632 PF07664 ABUW_3632 ABUW_3632 PF07670 Nucleoside recognition ABUW_3633 PF04023 FeoA domain ABUW_3634 PF00589 Phage integrase family ABUW_3634 PF02899 Phage integrase, N-terminal SAM-like domain ABUW_3635 PF10411 Disulfide bond isomerase protein N-terminus ABUW_3635 PF13098 Thioredoxin-like domain ABUW_3636 PF00742 Homoserine dehydrogenase ABUW_3636 PF01842 ACT domain ABUW_3636 PF03447 Homoserine dehydrogenase, NAD binding domain ABUW_3637 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_3638 PF00768 D-alanyl-D-alanine carboxypeptidase ABUW_3639 PF00072 Response regulator receiver domain ABUW_3639 PF00196 Bacterial regulatory proteins, luxR family ABUW_3640 PF00512 His Kinase A (phospho-acceptor) domain ABUW_3640 PF00989 PAS fold ABUW_3640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABUW_3641 PF00072 Response regulator receiver domain ABUW_3641 PF00158 Sigma-54 interaction domain ABUW_3641 PF02954 Bacterial regulatory protein, Fis family ABUW_3642 PF03572 Peptidase family S41 ABUW_3643 PF01676 Metalloenzyme superfamily ABUW_3643 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ABUW_3644 PF03739 ABUW_3644 ABUW_3645 PF03739 ABUW_3645 ABUW_3646 PF00883 Cytosol aminopeptidase family, catalytic domain ABUW_3646 PF02789 Cytosol aminopeptidase family, N-terminal domain ABUW_3647 PF04364 DNA polymerase III chi subunit, HolC ABUW_3650 PF00677 Lumazine binding domain ABUW_3651 PF02086 D12 class N6 adenine-specific DNA methyltransferase ABUW_3652 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABUW_3652 PF01872 RibD C-terminal domain ABUW_3653 PF03477 ATP cone domain ABUW_3654 PF00909 Ammonium Transporter Family ABUW_3655 PF00543 Nitrogen regulatory protein P-II ABUW_3656 PF04380 ABUW_3656 ABUW_3659 PF00916 ABUW_3659 ABUW_3659 PF01740 STAS domain ABUW_3661 PF01610 ABUW_3661 ABUW_3661 PF13542 ABUW_3661 ABUW_3661 PF14690 ABUW_3661 ABUW_3663 PF01252 ABUW_3663 ABUW_3664 PF01545 Cation efflux family ABUW_3665 PF13411 MerR HTH family regulatory protein ABUW_3667 PF03960 ArsC family ABUW_3668 PF01022 Bacterial regulatory protein, arsR family ABUW_3669 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABUW_3670 PF01758 Sodium Bile acid symporter family ABUW_3671 PF03358 NADPH-dependent FMN reductase ABUW_3672 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABUW_3673 PF13738 Pyridine nucleotide-disulphide oxidoreductase ABUW_3675 PF06527 ABUW_3675 ABUW_3676 PF05621 ABUW_3676 ABUW_3677 PF00665 Integrase core domain ABUW_3677 PF09299 Mu transposase, C-terminal ABUW_3678 PF08721 TnsA endonuclease C terminal ABUW_3678 PF08722 TnsA endonuclease N terminal ABUW_3680 PF00155 Aminotransferase class I and II ABUW_3680 PF00392 Bacterial regulatory proteins, gntR family ABUW_3681 PF00596 Class II Aldolase and Adducin N-terminal domain ABUW_3682 PF00701 Dihydrodipicolinate synthetase family ABUW_3683 PF09694 ABUW_3683 ABUW_3685 PF03573 outer membrane porin, OprD family ABUW_3686 PF00719 Inorganic pyrophosphatase ABUW_3687 PF01124 MAPEG family ABUW_3689 PF00501 AMP-binding enzyme ABUW_3689 PF13193 AMP-binding enzyme C-terminal domain ABUW_3690 PF00521 DNA gyrase/topoisomerase IV, subunit A ABUW_3690 PF03989 DNA gyrase C-terminal domain, beta-propeller ABUW_3691 PF00083 Sugar (and other) transporter ABUW_3692 PF03458 ABUW_3692 ABUW_3693 PF02810 SEC-C motif ABUW_3694 PF00571 CBS domain ABUW_3694 PF03471 Transporter associated domain ABUW_3694 PF03741 ABUW_3694 ABUW_3696 PF03641 Possible lysine decarboxylase ABUW_3697 PF07690 Major Facilitator Superfamily ABUW_3698 PF01183 Glycosyl hydrolases family 25 ABUW_3699 PF00817 impB/mucB/samB family ABUW_3699 PF11798 IMS family HHH motif ABUW_3699 PF11799 impB/mucB/samB family C-terminal domain ABUW_3701 PF01042 Endoribonuclease L-PSP ABUW_3702 PF10881 ABUW_3702 ABUW_3703 PF04055 Radical SAM superfamily ABUW_3703 PF08497 ABUW_3703 ABUW_3703 PF11842 ABUW_3703 ABUW_3704 PF13449 Esterase-like activity of phytase ABUW_3705 PF13411 MerR HTH family regulatory protein ABUW_3706 PF11158 ABUW_3706 ABUW_3707 PF03358 NADPH-dependent FMN reductase ABUW_3708 PF01464 Transglycosylase SLT domain ABUW_3709 PF00291 Pyridoxal-phosphate dependent enzyme ABUW_3710 PF13527 Acetyltransferase (GNAT) domain ABUW_3716 PF00440 Bacterial regulatory proteins, tetR family ABUW_3717 PF09995 ABUW_3717 ABUW_3719 PF00593 TonB dependent receptor ABUW_3719 PF07715 TonB-dependent Receptor Plug Domain ABUW_3720 PF11162 ABUW_3720 ABUW_3721 PF01327 Polypeptide deformylase ABUW_3722 PF01476 LysM domain ABUW_3723 PF02481 DNA recombination-mediator protein A ABUW_3724 PF01300 Telomere recombination ABUW_3725 PF00892 EamA-like transporter family ABUW_3726 PF00440 Bacterial regulatory proteins, tetR family ABUW_3727 PF07690 Major Facilitator Superfamily ABUW_3728 PF12833 Helix-turn-helix domain ABUW_3729 PF00255 Glutathione peroxidase ABUW_3731 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABUW_3732 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABUW_3732 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABUW_3733 PF00231 ATP synthase ABUW_3734 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABUW_3734 PF00306 ATP synthase alpha/beta chain, C terminal domain ABUW_3734 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABUW_3735 PF00213 ATP synthase delta (OSCP) subunit ABUW_3736 PF00430 ATP synthase B/B' CF(0) ABUW_3737 PF00137 ATP synthase subunit C ABUW_3738 PF00119 ATP synthase A chain ABUW_3739 PF03899 ABUW_3739 ABUW_3740 PF01297 Periplasmic solute binding protein family ABUW_3741 PF01475 Ferric uptake regulator family ABUW_3742 PF00005 ABC transporter ABUW_3743 PF00950 ABUW_3743 ABUW_3744 PF01810 ABUW_3744 ABUW_3745 PF04261 Dyp-type peroxidase family ABUW_3746 PF00390 Malic enzyme, N-terminal domain ABUW_3746 PF03949 Malic enzyme, NAD binding domain ABUW_3747 PF00750 tRNA synthetases class I (R) ABUW_3747 PF03485 Arginyl tRNA synthetase N terminal domain ABUW_3747 PF05746 DALR anticodon binding domain ABUW_3748 PF05036 Sporulation related domain ABUW_3749 PF02798 Glutathione S-transferase, N-terminal domain ABUW_3749 PF14497 Glutathione S-transferase, C-terminal domain ABUW_3750 PF02566 OsmC-like protein ABUW_3751 PF02678 Pirin ABUW_3751 PF05726 Pirin C-terminal cupin domain ABUW_3752 PF12977 Domain of Unknown Function with PDB structure (DUF3861) ABUW_3753 PF03551 Transcriptional regulator PadR-like family ABUW_3754 PF01909 Nucleotidyltransferase domain ABUW_3754 PF13427 ABUW_3754 ABUW_3755 PF00117 Glutamine amidotransferase class-I ABUW_3755 PF00958 GMP synthase C terminal domain ABUW_3755 PF02540 NAD synthase ABUW_3756 PF04286 ABUW_3756 ABUW_3757 PF07681 ABUW_3757 ABUW_3758 PF09335 ABUW_3758 ABUW_3759 PF01810 ABUW_3759 ABUW_3761 PF13614 AAA domain ABUW_3762 PF04247 ABUW_3762 ABUW_3763 PF01722 BolA-like protein ABUW_3766 PF01648 4'-phosphopantetheinyl transferase superfamily ABUW_3767 PF01370 NAD dependent epimerase/dehydratase family ABUW_3767 PF12697 Alpha/beta hydrolase family ABUW_3769 PF03176 MMPL family ABUW_3769 PF10604 Polyketide cyclase / dehydrase and lipid transport ABUW_3769 PF17131 ABUW_3769 ABUW_3770 PF00501 AMP-binding enzyme ABUW_3770 PF00550 Phosphopantetheine attachment site ABUW_3770 PF00668 Condensation domain ABUW_3770 PF00975 Thioesterase domain ABUW_3770 PF13193 AMP-binding enzyme C-terminal domain ABUW_3771 PF00550 Phosphopantetheine attachment site ABUW_3772 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_3772 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_3773 PF00501 AMP-binding enzyme ABUW_3774 PF00196 Bacterial regulatory proteins, luxR family ABUW_3774 PF03472 Autoinducer binding domain ABUW_3775 PF16245 ABUW_3775 ABUW_3776 PF00765 Autoinducer synthetase ABUW_3777 PF07690 Major Facilitator Superfamily ABUW_3778 PF16113 ABUW_3778 ABUW_3779 PF00378 Enoyl-CoA hydratase/isomerase family ABUW_3780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABUW_3780 PF02770 Acyl-CoA dehydrogenase, middle domain ABUW_3780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABUW_3781 PF00501 AMP-binding enzyme ABUW_3781 PF13193 AMP-binding enzyme C-terminal domain ABUW_3782 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABUW_3782 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABUW_3783 PF00171 Aldehyde dehydrogenase family ABUW_3784 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3784 PF03466 LysR substrate binding domain ABUW_3785 PF00324 Amino acid permease ABUW_3786 PF00324 Amino acid permease ABUW_3787 PF01042 Endoribonuclease L-PSP ABUW_3788 PF00842 Alanine racemase, C-terminal domain ABUW_3788 PF01168 Alanine racemase, N-terminal domain ABUW_3789 PF01266 FAD dependent oxidoreductase ABUW_3790 PF01037 AsnC family ABUW_3790 PF13412 Winged helix-turn-helix DNA-binding ABUW_3791 PF07786 ABUW_3791 ABUW_3792 PF00593 TonB dependent receptor ABUW_3792 PF07715 TonB-dependent Receptor Plug Domain ABUW_3793 PF12680 SnoaL-like domain ABUW_3794 PF06877 Regulator of ribonuclease activity B ABUW_3796 PF06210 ABUW_3796 ABUW_3798 PF00106 short chain dehydrogenase ABUW_3800 PF00872 ABUW_3800 ABUW_3801 PF16133 ABUW_3801 ABUW_3803 PF13737 ABUW_3803 ABUW_3804 PF07295 ABUW_3804 ABUW_3806 PF00330 Aconitase family (aconitate hydratase) ABUW_3806 PF00694 Aconitase C-terminal domain ABUW_3807 PF00285 Citrate synthase ABUW_3808 PF13714 Phosphoenolpyruvate phosphomutase ABUW_3809 PF00392 Bacterial regulatory proteins, gntR family ABUW_3809 PF07729 FCD domain ABUW_3810 PF00155 Aminotransferase class I and II ABUW_3811 PF01565 FAD binding domain ABUW_3811 PF09330 D-lactate dehydrogenase, membrane binding ABUW_3812 PF01070 FMN-dependent dehydrogenase ABUW_3813 PF00392 Bacterial regulatory proteins, gntR family ABUW_3813 PF07729 FCD domain ABUW_3814 PF02652 ABUW_3814 ABUW_3815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABUW_3815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABUW_3815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABUW_3815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABUW_3816 PF16363 ABUW_3816 ABUW_3817 PF00342 Phosphoglucose isomerase ABUW_3818 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABUW_3818 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABUW_3819 PF00483 Nucleotidyl transferase ABUW_3820 PF02719 Polysaccharide biosynthesis protein ABUW_3820 PF13727 CoA-binding domain ABUW_3821 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABUW_3822 PF00132 Bacterial transferase hexapeptide (six repeats) ABUW_3823 PF02397 ABUW_3823 ABUW_3824 PF00534 Glycosyl transferases group 1 ABUW_3824 PF13579 Glycosyl transferase 4-like domain ABUW_3827 PF13440 ABUW_3827 ABUW_3828 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABUW_3828 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABUW_3828 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABUW_3829 PF02350 UDP-N-acetylglucosamine 2-epimerase ABUW_3830 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABUW_3830 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABUW_3830 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABUW_3831 PF02563 Polysaccharide biosynthesis/export protein ABUW_3832 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABUW_3833 PF02706 Chain length determinant protein ABUW_3833 PF13614 AAA domain ABUW_3833 PF13807 ABUW_3833 ABUW_3834 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABUW_3834 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABUW_3835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABUW_3835 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABUW_3836 PF03023 ABUW_3836 ABUW_3837 PF01510 N-acetylmuramoyl-L-alanine amidase ABUW_3838 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABUW_3838 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABUW_3840 PF04185 Phosphoesterase family ABUW_3840 PF05506 ABUW_3840 ABUW_3841 PF01138 3' exoribonuclease family, domain 1 ABUW_3841 PF03725 3' exoribonuclease family, domain 2 ABUW_3842 PF00487 ABUW_3842 ABUW_3843 PF00175 Oxidoreductase NAD-binding domain ABUW_3843 PF00970 Oxidoreductase FAD-binding domain ABUW_3844 PF00440 Bacterial regulatory proteins, tetR family ABUW_3845 PF00440 Bacterial regulatory proteins, tetR family ABUW_3846 PF01323 DSBA-like thioredoxin domain ABUW_3847 PF13489 Methyltransferase domain ABUW_3848 PF13419 Haloacid dehalogenase-like hydrolase ABUW_3849 PF00106 short chain dehydrogenase ABUW_3850 PF11776 Domain of unknown function (DUF3315) ABUW_3851 PF11776 Domain of unknown function (DUF3315) ABUW_3852 PF00583 Acetyltransferase (GNAT) family ABUW_3852 PF00696 Amino acid kinase family ABUW_3853 PF09084 NMT1/THI5 like ABUW_3854 PF13379 NMT1-like family ABUW_3855 PF00296 Luciferase-like monooxygenase ABUW_3856 PF00528 Binding-protein-dependent transport system inner membrane component ABUW_3857 PF00005 ABC transporter ABUW_3858 PF00440 Bacterial regulatory proteins, tetR family ABUW_3858 PF08362 YcdC-like protein, C-terminal region ABUW_3859 PF01048 Phosphorylase superfamily ABUW_3860 PF03595 Voltage-dependent anion channel ABUW_3861 PF01687 Riboflavin kinase ABUW_3861 PF06574 FAD synthetase ABUW_3862 PF00133 tRNA synthetases class I (I, L, M and V) ABUW_3862 PF06827 Zinc finger found in FPG and IleRS ABUW_3862 PF08264 Anticodon-binding domain of tRNA ABUW_3863 PF01252 ABUW_3863 ABUW_3864 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABUW_3865 PF03358 NADPH-dependent FMN reductase ABUW_3866 PF12796 Ankyrin repeats (3 copies) ABUW_3872 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABUW_3873 PF07859 alpha/beta hydrolase fold ABUW_3877 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABUW_3877 PF03466 LysR substrate binding domain ABUW_3878 PF01025 GrpE ABUW_3879 PF00012 Hsp70 protein ABUW_3880 PF00413 Matrixin ABUW_3881 PF00413 Matrixin ABUW_3883 PF01471 Putative peptidoglycan binding domain ABUW_3883 PF13406 Transglycosylase SLT domain ABUW_3885 PF02222 ATP-grasp domain ABUW_3886 PF00731 AIR carboxylase ABUW_3887 PF04342 ABUW_3887 ABUW_3888 PF01225 Mur ligase family, catalytic domain ABUW_3888 PF02875 Mur ligase family, glutamate ligase domain ABUW_3888 PF08245 Mur ligase middle domain ABUW_3889 PF06772 ABUW_3889 ABUW_3890 PF01569 PAP2 superfamily ABUW_3891 PF03741 ABUW_3891 ABUW_3893 PF03738 Glutathionylspermidine synthase preATP-grasp ABUW_3894 PF00355 Rieske [2Fe-2S] domain ABUW_3895 PF01979 Amidohydrolase family ABUW_3897 PF00156 Phosphoribosyl transferase domain ABUW_3898 PF04226 ABUW_3898 ABUW_3899 PF10411 Disulfide bond isomerase protein N-terminus ABUW_3899 PF13098 Thioredoxin-like domain ABUW_3900 PF01545 Cation efflux family ABUW_3901 PF02583 Metal-sensitive transcriptional repressor ABUW_3902 PF01926 50S ribosome-binding GTPase ABUW_3902 PF10396 GTP-binding protein TrmE N-terminus ABUW_3902 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE ABUW_3903 PF02096 60Kd inner membrane protein ABUW_3903 PF14849 YidC periplasmic domain ABUW_3904 PF01809 ABUW_3904 ABUW_3905 PF00825 Ribonuclease P ABUW_3906 PF00468 Ribosomal protein L34 ABUW_4001 PF03090 ABUW_4001 ABUW_4001 PF08708 Primase C terminal 1 (PriCT-1) ABUW_4003 PF06414 Zeta toxin ABUW_4004 PF06666 ABUW_4004 ABUW_4012 PF00565 Staphylococcal nuclease homologue ABUW_4013 PF00816 H-NS histone family ABUW_4023 PF13614 AAA domain ABUW_4024 PF02195 ParB-like nuclease domain ABUW_4024 PF08535 KorB domain ABUW_4028 PF05816 ABUW_4028 ABUW_4037 PF13744 Helix-turn-helix domain ABUW_4038 PF05973 ABUW_4038 ABUW_4046 PF05621 ABUW_4046 ABUW_4047 PF00583 Acetyltransferase (GNAT) family ABUW_4048 PF00809 Pterin binding enzyme ABUW_4049 PF00893 Small Multidrug Resistance protein ABUW_4050 PF00186 Dihydrofolate reductase ABUW_4052 PF13354 Beta-lactamase enzyme family ABUW_4055 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase ABUW_4056 PF01636 Phosphotransferase enzyme family ABUW_4057 PF01909 Nucleotidyltransferase domain ABUW_4057 PF13427 ABUW_4057 ABUW_4059 PF07690 Major Facilitator Superfamily ABUW_4060 PF10706 Aminoglycoside-2''-adenylyltransferase ABUW_4061 PF00589 Phage integrase family ABUW_4061 PF13495 Phage integrase, N-terminal SAM-like domain ABUW_4075 PF10412 Type IV secretion-system coupling protein DNA-binding domain ABUW_4076 PF08751 TrwC relaxase ABUW_4076 PF13604 AAA domain ABUW_4086 PF00665 Integrase core domain ABUW_4086 PF13936 Helix-turn-helix domain ABUW_4087 PF01636 Phosphotransferase enzyme family ABUW_4089 PF00665 Integrase core domain ABUW_4089 PF13936 Helix-turn-helix domain ABUW_4092 PF00239 Resolvase, N terminal domain ABUW_4095 PF01464 Transglycosylase SLT domain ABUW_4098 PF07178 ABUW_4098 ABUW_4099 PF05309 ABUW_4099 ABUW_4100 PF06586 ABUW_4100 ABUW_4101 PF03743 Bacterial conjugation TrbI-like protein ABUW_4102 PF10411 Disulfide bond isomerase protein N-terminus ABUW_4102 PF13098 Thioredoxin-like domain ABUW_4104 PF09676 ABUW_4104 ABUW_4105 PF11130 ABUW_4105 ABUW_4105 PF12846 AAA-like domain ABUW_4107 PF10502 Signal peptidase, peptidase S26 ABUW_4109 PF06834 ABUW_4109 ABUW_4110 PF09673 ABUW_4110 ABUW_4111 PF06986 ABUW_4111 ABUW_4112 PF13728 F plasmid transfer operon protein ABUW_4114 PF06122 ABUW_4114 ABUW_4115 PF07916 ABUW_4115 ABUW_4116 PF01464 Transglycosylase SLT domain ABUW_4118 PF00817 impB/mucB/samB family ABUW_4118 PF11799 impB/mucB/samB family C-terminal domain ABUW_4118 PF13438 ABUW_4118 ABUW_5001 PF01051 Initiator Replication protein ABUW_5004 PF08238 Sel1 repeat ABUW_5006 PF04365 Protein of unknown function (DUF497) ABUW_5007 PF14384 ABUW_5007 ABUW_5008 PF00593 TonB dependent receptor ABUW_5008 PF07715 TonB-dependent Receptor Plug Domain