ABUW_0001 SM00382 ATPases associated with a variety of cellular activities ABUW_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain ABUW_0002 SM00480 DNA polymerase III beta subunit ABUW_0004 SM00387 Histidine kinase-like ATPases ABUW_0004 SM00433 TopoisomeraseII ABUW_0007 SM00382 ATPases associated with a variety of cellular activities ABUW_0037 SM00271 DnaJ molecular chaperone homology domain ABUW_0045 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_0046 SM00829 Enoylreductase ABUW_0050 SM00478 endonuclease III ABUW_0050 SM00525 ABUW_0050 ABUW_0056 SM00382 ATPases associated with a variety of cellular activities ABUW_0061 SM01130 ABUW_0061 ABUW_0067 SM00346 helix_turn_helix isocitrate lyase regulation ABUW_0073 SM00833 Cobalamin synthesis protein cobW C-terminal domain ABUW_0075 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_0075 SM00866 ABUW_0075 ABUW_0087 SM00387 Histidine kinase-like ATPases ABUW_0102 SM00450 Rhodanese Homology Domain ABUW_0105 SM00387 Histidine kinase-like ATPases ABUW_0105 SM00388 His Kinase A (phosphoacceptor) domain ABUW_0106 SM00448 cheY-homologous receiver domain ABUW_0106 SM00862 Transcriptional regulatory protein, C terminal ABUW_0117 SM00257 Lysin motif ABUW_0124 SM00387 Histidine kinase-like ATPases ABUW_0124 SM00433 TopoisomeraseII ABUW_0137 SM00267 diguanylate cyclase ABUW_0150 SM00842 Cell division protein FtsA ABUW_0151 SM00864 Tubulin/FtsZ family, GTPase domain ABUW_0151 SM00865 Tubulin/FtsZ family, C-terminal domain ABUW_0160 SM00849 Metallo-beta-lactamase superfamily ABUW_0162 SM00116 Domain in cystathionine beta-synthase and other proteins. ABUW_0162 SM01240 ABUW_0162 ABUW_0167 SM00937 ABUW_0167 ABUW_0169 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABUW_0177 SM00344 helix_turn_helix ASNC type ABUW_0180 SM00421 helix_turn_helix, Lux Regulon ABUW_0180 SM00448 cheY-homologous receiver domain ABUW_0182 SM00387 Histidine kinase-like ATPases ABUW_0182 SM00388 His Kinase A (phosphoacceptor) domain ABUW_0182 SM00448 cheY-homologous receiver domain ABUW_0188 SM00267 diguanylate cyclase ABUW_0191 SM00829 Enoylreductase ABUW_0200 SM00530 Helix-turn-helix XRE-family like proteins ABUW_0202 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_0219 SM00342 helix_turn_helix, arabinose operon control protein ABUW_0229 SM00342 helix_turn_helix, arabinose operon control protein ABUW_0234 SM00477 DNA/RNA non-specific endonuclease ABUW_0234 SM00892 DNA/RNA non-specific endonuclease ABUW_0238 SM00342 helix_turn_helix, arabinose operon control protein ABUW_0242 SM00357 Cold shock protein domain ABUW_0245 SM00530 Helix-turn-helix XRE-family like proteins ABUW_0247 SM00474 3'-5' exonuclease ABUW_0256 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABUW_0256 SM00387 Histidine kinase-like ATPases ABUW_0256 SM00388 His Kinase A (phosphoacceptor) domain ABUW_0257 SM00448 cheY-homologous receiver domain ABUW_0257 SM00862 Transcriptional regulatory protein, C terminal ABUW_0258 SM00316 Ribosomal protein S1-like RNA-binding domain ABUW_0258 SM00732 Likely ribonuclease with RNase H fold. ABUW_0259 SM00947 Carbonic anhydrase ABUW_0262 SM00382 ATPases associated with a variety of cellular activities ABUW_0290 SM00842 Cell division protein FtsA ABUW_0294 SM00965 Secretin and TonB N terminus short domain ABUW_0309 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABUW_0309 SM00954 Region found in RelA / SpoT proteins ABUW_0310 SM01409 ABUW_0310 ABUW_0311 SM00072 Guanylate kinase homologues. ABUW_0350 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABUW_0371 SM00116 Domain in cystathionine beta-synthase and other proteins. ABUW_0379 SM00861 Transketolase, pyrimidine binding domain ABUW_0381 SM00487 DEAD-like helicases superfamily ABUW_0381 SM00490 helicase superfamily c-terminal domain ABUW_0383 SM00382 ATPases associated with a variety of cellular activities ABUW_0392 SM00487 DEAD-like helicases superfamily ABUW_0392 SM00490 helicase superfamily c-terminal domain ABUW_0395 SM00563 Phosphate acyltransferases ABUW_0405 SM01403 ABUW_0405 ABUW_0409 SM01382 ABUW_0409 ABUW_0409 SM01383 ABUW_0409 ABUW_0412 SM00322 K homology RNA-binding domain ABUW_0416 SM01374 ABUW_0416 ABUW_0417 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ABUW_0430 SM00363 S4 RNA-binding domain ABUW_0430 SM01390 ABUW_0430 ABUW_0431 SM00662 RNA polymerases D ABUW_0444 SM00316 Ribosomal protein S1-like RNA-binding domain ABUW_0444 SM00955 ABUW_0444 ABUW_0454 SM00342 helix_turn_helix, arabinose operon control protein ABUW_0464 SM00729 Elongator protein 3, MiaB family, Radical SAM ABUW_0470 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. ABUW_0489 SM00878 Biotin carboxylase C-terminal domain ABUW_0496 SM00650 Ribosomal RNA adenine dimethylases ABUW_0502 SM00563 Phosphate acyltransferases ABUW_0503 SM00155 Phospholipase D. Active site motifs. ABUW_0506 SM00267 diguanylate cyclase ABUW_0521 SM00450 Rhodanese Homology Domain ABUW_0526 SM00481 DNA polymerase alpha chain like domain ABUW_0532 SM01323 ABUW_0532 ABUW_0541 SM00479 ABUW_0541 ABUW_0549 SM00530 Helix-turn-helix XRE-family like proteins ABUW_0585 SM00387 Histidine kinase-like ATPases ABUW_0585 SM00388 His Kinase A (phosphoacceptor) domain ABUW_0608 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABUW_0608 SM00387 Histidine kinase-like ATPases ABUW_0608 SM00388 His Kinase A (phosphoacceptor) domain ABUW_0609 SM00448 cheY-homologous receiver domain ABUW_0609 SM00862 Transcriptional regulatory protein, C terminal ABUW_0621 SM00342 helix_turn_helix, arabinose operon control protein ABUW_0627 SM00849 Metallo-beta-lactamase superfamily ABUW_0629 SM00957 SecA DEAD-like domain ABUW_0629 SM00958 SecA preprotein cross-linking domain ABUW_0639 SM00342 helix_turn_helix, arabinose operon control protein ABUW_0642 SM00564 beta-propeller repeat ABUW_0655 SM00838 Elongation factor G C-terminus ABUW_0659 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ABUW_0659 SM01232 ABUW_0659 ABUW_0664 SM00671 Sel1-like repeats. ABUW_0678 SM00448 cheY-homologous receiver domain ABUW_0679 SM00448 cheY-homologous receiver domain ABUW_0680 SM00260 Two component signalling adaptor domain ABUW_0681 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABUW_0682 SM00073 Histidine Phosphotransfer domain ABUW_0682 SM00260 Two component signalling adaptor domain ABUW_0682 SM00387 Histidine kinase-like ATPases ABUW_0682 SM00448 cheY-homologous receiver domain ABUW_0682 SM01231 ABUW_0682 ABUW_0684 SM00729 Elongator protein 3, MiaB family, Radical SAM ABUW_0712 SM00845 GatB domain ABUW_0719 SM00316 Ribosomal protein S1-like RNA-binding domain ABUW_0726 SM00342 helix_turn_helix, arabinose operon control protein ABUW_0730 SM00342 helix_turn_helix, arabinose operon control protein ABUW_0731 SM00829 Enoylreductase ABUW_0752 SM00382 ATPases associated with a variety of cellular activities ABUW_0761 SM00990 ABUW_0761 ABUW_0769 SM00954 Region found in RelA / SpoT proteins ABUW_0794 SM00530 Helix-turn-helix XRE-family like proteins ABUW_0801 SM01252 ABUW_0801 ABUW_0821 SM00244 prohibitin homologues ABUW_0824 SM00563 Phosphate acyltransferases ABUW_0828 SM00448 cheY-homologous receiver domain ABUW_0828 SM00862 Transcriptional regulatory protein, C terminal ABUW_0829 SM00387 Histidine kinase-like ATPases ABUW_0829 SM00388 His Kinase A (phosphoacceptor) domain ABUW_0838 SM00822 ABUW_0838 ABUW_0845 SM00014 Acid phosphatase homologues ABUW_0865 SM00450 Rhodanese Homology Domain ABUW_0872 SM00861 Transketolase, pyrimidine binding domain ABUW_0876 SM00881 CoA binding domain ABUW_0887 SM00854 Bacterial capsule synthesis protein PGA_cap ABUW_0893 SM00851 MGS-like domain ABUW_0893 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABUW_0894 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ABUW_0897 SM01103 ABUW_0897 ABUW_0899 SM00382 ATPases associated with a variety of cellular activities ABUW_0914 SM00046 Diacylglycerol kinase catalytic domain (presumed) ABUW_0917 SM00883 Chaperonin 10 Kd subunit ABUW_0920 SM00849 Metallo-beta-lactamase superfamily ABUW_0949 SM00978 ABUW_0949 ABUW_0950 SM00382 ATPases associated with a variety of cellular activities ABUW_0958 SM00893 Electron transfer flavoprotein domain ABUW_0959 SM00893 Electron transfer flavoprotein domain ABUW_0960 SM00434 DNA Topoisomerase IV ABUW_0975 SM00382 ATPases associated with a variety of cellular activities ABUW_0976 SM00849 Metallo-beta-lactamase superfamily ABUW_0999 SM00382 ATPases associated with a variety of cellular activities ABUW_1000 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABUW_1001 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABUW_1002 SM01211 ABUW_1002 ABUW_1017 SM00382 ATPases associated with a variety of cellular activities ABUW_1027 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABUW_1029 SM00838 Elongation factor G C-terminus ABUW_1032 SM00358 Double-stranded RNA binding motif ABUW_1032 SM00535 Ribonuclease III family ABUW_1045 SM00267 diguanylate cyclase ABUW_1047 SM00487 DEAD-like helicases superfamily ABUW_1047 SM00490 helicase superfamily c-terminal domain ABUW_1050 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABUW_1054 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ABUW_1074 SM01329 ABUW_1074 ABUW_1085 SM00880 ABUW_1085 ABUW_1085 SM01118 ABUW_1085 ABUW_1101 SM00487 DEAD-like helicases superfamily ABUW_1101 SM00490 helicase superfamily c-terminal domain ABUW_1112 SM00344 helix_turn_helix ASNC type ABUW_1118 SM00382 ATPases associated with a variety of cellular activities ABUW_1127 SM00936 Penicillin-binding protein 5, C-terminal domain ABUW_1131 SM00257 Lysin motif ABUW_1138 SM00052 Putative diguanylate phosphodiesterase ABUW_1141 SM00841 Elongation factor P, C-terminal ABUW_1141 SM01185 ABUW_1141 ABUW_1175 SM00382 ATPases associated with a variety of cellular activities ABUW_1184 SM00382 ATPases associated with a variety of cellular activities ABUW_1185 SM00382 ATPases associated with a variety of cellular activities ABUW_1196 SM01092 CO dehydrogenase flavoprotein C-terminal domain ABUW_1197 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABUW_1199 SM00463 Small MutS-related domain ABUW_1207 SM01230 ABUW_1207 ABUW_1218 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABUW_1220 SM00919 Malic enzyme, NAD binding domain ABUW_1220 SM01274 ABUW_1220 ABUW_1221 SM00052 Putative diguanylate phosphodiesterase ABUW_1221 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABUW_1221 SM00091 PAS domain ABUW_1221 SM00267 diguanylate cyclase ABUW_1224 SM00996 S-adenosyl-L-homocysteine hydrolase ABUW_1224 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ABUW_1228 SM00729 Elongator protein 3, MiaB family, Radical SAM ABUW_1238 SM00342 helix_turn_helix, arabinose operon control protein ABUW_1248 SM00382 ATPases associated with a variety of cellular activities ABUW_1265 SM00530 Helix-turn-helix XRE-family like proteins ABUW_1271 SM00382 ATPases associated with a variety of cellular activities ABUW_1331 SM00479 ABUW_1331 ABUW_1339 SM00062 Bacterial periplasmic substrate-binding proteins ABUW_1346 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_1351 SM00382 ATPases associated with a variety of cellular activities ABUW_1353 SM00448 cheY-homologous receiver domain ABUW_1353 SM00862 Transcriptional regulatory protein, C terminal ABUW_1354 SM00387 Histidine kinase-like ATPases ABUW_1354 SM00388 His Kinase A (phosphoacceptor) domain ABUW_1365 SM00830 Chorismate mutase type II ABUW_1377 SM00357 Cold shock protein domain ABUW_1378 SM00487 DEAD-like helicases superfamily ABUW_1378 SM00490 helicase superfamily c-terminal domain ABUW_1382 SM00855 Phosphoglycerate mutase family ABUW_1426 SM00495 Chitin-binding domain type 3 ABUW_1457 SM00220 Serine/Threonine protein kinases, catalytic domain ABUW_1472 SM01034 Sensors of blue-light using FAD ABUW_1475 SM00342 helix_turn_helix, arabinose operon control protein ABUW_1484 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_1484 SM00895 ABUW_1484 ABUW_1487 SM00972 Spore Coat Protein U domain ABUW_1492 SM00972 Spore Coat Protein U domain ABUW_1504 SM00095 Transthyretin ABUW_1506 SM00448 cheY-homologous receiver domain ABUW_1506 SM00862 Transcriptional regulatory protein, C terminal ABUW_1507 SM00387 Histidine kinase-like ATPases ABUW_1507 SM00388 His Kinase A (phosphoacceptor) domain ABUW_1514 SM00388 His Kinase A (phosphoacceptor) domain ABUW_1515 SM00448 cheY-homologous receiver domain ABUW_1515 SM00862 Transcriptional regulatory protein, C terminal ABUW_1527 SM00849 Metallo-beta-lactamase superfamily ABUW_1529 SM00382 ATPases associated with a variety of cellular activities ABUW_1529 SM00930 ABUW_1529 ABUW_1531 SM01209 ABUW_1531 ABUW_1531 SM01210 ABUW_1531 ABUW_1532 SM00798 AICARFT/IMPCHase bienzyme ABUW_1532 SM00851 MGS-like domain ABUW_1537 SM01228 ABUW_1537 ABUW_1542 SM00460 Transglutaminase/protease-like homologues ABUW_1544 SM01005 Alanine racemase, C-terminal domain ABUW_1567 SM00937 ABUW_1567 ABUW_1570 SM00062 Bacterial periplasmic substrate-binding proteins ABUW_1571 SM00342 helix_turn_helix, arabinose operon control protein ABUW_1572 SM00822 ABUW_1572 ABUW_1575 SM00903 Flavin reductase like domain ABUW_1578 SM00905 Dihydroneopterin aldolase ABUW_1584 SM00387 Histidine kinase-like ATPases ABUW_1584 SM00388 His Kinase A (phosphoacceptor) domain ABUW_1585 SM00448 cheY-homologous receiver domain ABUW_1585 SM00862 Transcriptional regulatory protein, C terminal ABUW_1586 SM01230 ABUW_1586 ABUW_1602 SM00363 S4 RNA-binding domain ABUW_1607 SM00853 MutL C terminal dimerisation domain ABUW_1607 SM01340 ABUW_1607 ABUW_1622 SM00862 Transcriptional regulatory protein, C terminal ABUW_1625 SM00382 ATPases associated with a variety of cellular activities ABUW_1631 SM00972 Spore Coat Protein U domain ABUW_1634 SM00972 Spore Coat Protein U domain ABUW_1638 SM00830 Chorismate mutase type II ABUW_1639 SM00344 helix_turn_helix ASNC type ABUW_1660 SM00382 ATPases associated with a variety of cellular activities ABUW_1666 SM00831 Cation transporter/ATPase, N-terminus ABUW_1669 SM00344 helix_turn_helix ASNC type ABUW_1675 SM00822 ABUW_1675 ABUW_1680 SM00382 ATPases associated with a variety of cellular activities ABUW_1686 SM00226 Low molecular weight phosphatase family ABUW_1693 SM01236 ABUW_1693 ABUW_1696 SM00878 Biotin carboxylase C-terminal domain ABUW_1702 SM00448 cheY-homologous receiver domain ABUW_1702 SM01012 ABUW_1702 ABUW_1706 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABUW_1708 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABUW_1709 SM00729 Elongator protein 3, MiaB family, Radical SAM ABUW_1712 SM00852 Probable molybdopterin binding domain ABUW_1713 SM00852 Probable molybdopterin binding domain ABUW_1715 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_1732 SM00382 ATPases associated with a variety of cellular activities ABUW_1732 SM00448 cheY-homologous receiver domain ABUW_1733 SM00091 PAS domain ABUW_1733 SM00387 Histidine kinase-like ATPases ABUW_1733 SM00388 His Kinase A (phosphoacceptor) domain ABUW_1734 SM00729 Elongator protein 3, MiaB family, Radical SAM ABUW_1740 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABUW_1742 SM00935 Outer membrane protein (OmpH-like) ABUW_1748 SM00382 ATPases associated with a variety of cellular activities ABUW_1749 SM00363 S4 RNA-binding domain ABUW_1755 SM00344 helix_turn_helix ASNC type ABUW_1764 SM00052 Putative diguanylate phosphodiesterase ABUW_1764 SM00091 PAS domain ABUW_1764 SM00267 diguanylate cyclase ABUW_1768 SM00347 helix_turn_helix multiple antibiotic resistance protein ABUW_1783 SM00116 Domain in cystathionine beta-synthase and other proteins. ABUW_1789 SM00382 ATPases associated with a variety of cellular activities ABUW_1789 SM00962 SRP54-type protein, GTPase domain ABUW_1789 SM00963 SRP54-type protein, helical bundle domain ABUW_1802 SM01264 ABUW_1802 ABUW_1811 SM00859 Semialdehyde dehydrogenase, NAD binding domain ABUW_1814 SM00382 ATPases associated with a variety of cellular activities ABUW_1814 SM01086 C-terminal, D2-small domain, of ClpB protein ABUW_1827 SM01192 ABUW_1827 ABUW_1827 SM01193 ABUW_1827 ABUW_1831 SM00882 Coenzyme A transferase ABUW_1832 SM00882 Coenzyme A transferase ABUW_1834 SM00998 Adenylosuccinate lyase C-terminus ABUW_1841 SM00710 Parallel beta-helix repeats ABUW_1843 SM00564 beta-propeller repeat ABUW_1847 SM00849 Metallo-beta-lactamase superfamily ABUW_1848 SM00346 helix_turn_helix isocitrate lyase regulation ABUW_1852 SM00855 Phosphoglycerate mutase family ABUW_1856 SM00347 helix_turn_helix multiple antibiotic resistance protein ABUW_1865 SM00903 Flavin reductase like domain ABUW_1866 SM00342 helix_turn_helix, arabinose operon control protein ABUW_1873 SM00882 Coenzyme A transferase ABUW_1874 SM00882 Coenzyme A transferase ABUW_1877 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ABUW_1880 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_1880 SM00895 ABUW_1880 ABUW_1890 SM00422 helix_turn_helix, mercury resistance ABUW_1896 SM00342 helix_turn_helix, arabinose operon control protein ABUW_1917 SM00860 SMI1 / KNR4 family ABUW_1924 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_1924 SM00866 ABUW_1924 ABUW_1942 SM01400 ABUW_1942 ABUW_1947 SM00421 helix_turn_helix, Lux Regulon ABUW_1958 SM00487 DEAD-like helicases superfamily ABUW_1958 SM00490 helicase superfamily c-terminal domain ABUW_1967 SM00822 ABUW_1967 ABUW_1968 SM00822 ABUW_1968 ABUW_1970 SM00342 helix_turn_helix, arabinose operon control protein ABUW_1972 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABUW_1972 SM00387 Histidine kinase-like ATPases ABUW_1972 SM00388 His Kinase A (phosphoacceptor) domain ABUW_1973 SM00448 cheY-homologous receiver domain ABUW_1973 SM00862 Transcriptional regulatory protein, C terminal ABUW_1984 SM00530 Helix-turn-helix XRE-family like proteins ABUW_2057 SM00829 Enoylreductase ABUW_2062 SM00155 Phospholipase D. Active site motifs. ABUW_2067 SM00729 Elongator protein 3, MiaB family, Radical SAM ABUW_2077 SM00382 ATPases associated with a variety of cellular activities ABUW_2084 SM00342 helix_turn_helix, arabinose operon control protein ABUW_2086 SM00903 Flavin reductase like domain ABUW_2091 SM00342 helix_turn_helix, arabinose operon control protein ABUW_2096 SM00882 Coenzyme A transferase ABUW_2097 SM00882 Coenzyme A transferase ABUW_2108 SM00567 E-Z type HEAT repeats ABUW_2109 SM00382 ATPases associated with a variety of cellular activities ABUW_2114 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_2114 SM00866 ABUW_2114 ABUW_2118 SM00342 helix_turn_helix, arabinose operon control protein ABUW_2123 SM00849 Metallo-beta-lactamase superfamily ABUW_2124 SM00382 ATPases associated with a variety of cellular activities ABUW_2126 SM00829 Enoylreductase ABUW_2130 SM00861 Transketolase, pyrimidine binding domain ABUW_2132 SM00729 Elongator protein 3, MiaB family, Radical SAM ABUW_2135 SM00267 diguanylate cyclase ABUW_2140 SM00382 ATPases associated with a variety of cellular activities ABUW_2146 SM00341 Helicase and RNase D C-terminal ABUW_2146 SM00474 3'-5' exonuclease ABUW_2147 SM00493 ABUW_2147 ABUW_2158 SM01324 ABUW_2158 ABUW_2173 SM00855 Phosphoglycerate mutase family ABUW_2178 SM01006 Siderophore biosynthesis protein domain ABUW_2196 SM00342 helix_turn_helix, arabinose operon control protein ABUW_2198 SM00411 bacterial (prokaryotic) histone like domain ABUW_2205 SM00271 DnaJ molecular chaperone homology domain ABUW_2208 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain ABUW_2210 SM00487 DEAD-like helicases superfamily ABUW_2210 SM00490 helicase superfamily c-terminal domain ABUW_2210 SM00982 ABUW_2210 ABUW_2210 SM01058 CarD-like/TRCF domain ABUW_2221 SM00382 ATPases associated with a variety of cellular activities ABUW_2236 SM00342 helix_turn_helix, arabinose operon control protein ABUW_2239 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ABUW_2241 SM00411 bacterial (prokaryotic) histone like domain ABUW_2242 SM00316 Ribosomal protein S1-like RNA-binding domain ABUW_2247 SM00986 Uracil DNA glycosylase superfamily ABUW_2247 SM00987 UreE urease accessory protein, C-terminal domain ABUW_2259 SM00382 ATPases associated with a variety of cellular activities ABUW_2262 SM00470 ParB-like nuclease domain ABUW_2274 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ABUW_2276 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABUW_2280 SM00382 ATPases associated with a variety of cellular activities ABUW_2282 SM00342 helix_turn_helix, arabinose operon control protein ABUW_2286 SM00344 helix_turn_helix ASNC type ABUW_2293 SM00867 YceI-like domain ABUW_2295 SM00861 Transketolase, pyrimidine binding domain ABUW_2302 SM00530 Helix-turn-helix XRE-family like proteins ABUW_2307 SM00729 Elongator protein 3, MiaB family, Radical SAM ABUW_2307 SM00876 Biotin and Thiamin Synthesis associated domain ABUW_2324 SM01236 ABUW_2324 ABUW_2326 SM00563 Phosphate acyltransferases ABUW_2328 SM00344 helix_turn_helix ASNC type ABUW_2330 SM00382 ATPases associated with a variety of cellular activities ABUW_2333 SM00062 Bacterial periplasmic substrate-binding proteins ABUW_2340 SM00382 ATPases associated with a variety of cellular activities ABUW_2340 SM00930 ABUW_2340 ABUW_2344 SM00100 Cyclic nucleotide-monophosphate binding domain ABUW_2344 SM00419 helix_turn_helix, cAMP Regulatory protein ABUW_2351 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABUW_2354 SM00342 helix_turn_helix, arabinose operon control protein ABUW_2359 SM00870 ABUW_2359 ABUW_2360 SM00481 DNA polymerase alpha chain like domain ABUW_2370 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABUW_2376 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_2376 SM00895 ABUW_2376 ABUW_2381 SM00382 ATPases associated with a variety of cellular activities ABUW_2382 SM00062 Bacterial periplasmic substrate-binding proteins ABUW_2392 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_2396 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ABUW_2406 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_2413 SM00822 ABUW_2413 ABUW_2414 SM00450 Rhodanese Homology Domain ABUW_2420 SM00062 Bacterial periplasmic substrate-binding proteins ABUW_2421 SM00062 Bacterial periplasmic substrate-binding proteins ABUW_2422 SM00382 ATPases associated with a variety of cellular activities ABUW_2426 SM00421 helix_turn_helix, Lux Regulon ABUW_2426 SM00448 cheY-homologous receiver domain ABUW_2427 SM00387 Histidine kinase-like ATPases ABUW_2427 SM00388 His Kinase A (phosphoacceptor) domain ABUW_2427 SM00448 cheY-homologous receiver domain ABUW_2429 SM00344 helix_turn_helix ASNC type ABUW_2433 SM00384 DNA binding domain with preference for A/T rich regions ABUW_2436 SM01060 ABUW_2436 ABUW_2437 SM01236 ABUW_2437 ABUW_2455 SM00878 Biotin carboxylase C-terminal domain ABUW_2464 SM00882 Coenzyme A transferase ABUW_2465 SM00882 Coenzyme A transferase ABUW_2472 SM00346 helix_turn_helix isocitrate lyase regulation ABUW_2476 SM00346 helix_turn_helix isocitrate lyase regulation ABUW_2484 SM00382 ATPases associated with a variety of cellular activities ABUW_2486 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_2486 SM00866 ABUW_2486 ABUW_2488 SM00346 helix_turn_helix isocitrate lyase regulation ABUW_2498 SM00903 Flavin reductase like domain ABUW_2501 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_2501 SM00895 ABUW_2501 ABUW_2504 SM01060 ABUW_2504 ABUW_2513 SM00357 Cold shock protein domain ABUW_2544 SM00342 helix_turn_helix, arabinose operon control protein ABUW_2549 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_2549 SM00895 ABUW_2549 ABUW_2551 SM01130 ABUW_2551 ABUW_2555 SM00422 helix_turn_helix, mercury resistance ABUW_2562 SM00248 ankyrin repeats ABUW_2569 SM00382 ATPases associated with a variety of cellular activities ABUW_2569 SM01086 C-terminal, D2-small domain, of ClpB protein ABUW_2584 SM00382 ATPases associated with a variety of cellular activities ABUW_2591 SM00796 Allophanate hydrolase subunit 1 ABUW_2591 SM00797 Allophanate hydrolase subunit 2 ABUW_2591 SM00878 Biotin carboxylase C-terminal domain ABUW_2594 SM00829 Enoylreductase ABUW_2601 SM00671 Sel1-like repeats. ABUW_2603 SM00878 Biotin carboxylase C-terminal domain ABUW_2604 SM00796 Allophanate hydrolase subunit 1 ABUW_2604 SM00797 Allophanate hydrolase subunit 2 ABUW_2633 SM00344 helix_turn_helix ASNC type ABUW_2634 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ABUW_2634 SM00534 ATPase domain of DNA mismatch repair MUTS family ABUW_2643 SM00382 ATPases associated with a variety of cellular activities ABUW_2645 SM00382 ATPases associated with a variety of cellular activities ABUW_2649 SM00116 Domain in cystathionine beta-synthase and other proteins. ABUW_2650 SM00840 ABUW_2650 ABUW_2660 SM00710 Parallel beta-helix repeats ABUW_2661 SM00060 Fibronectin type 3 domain ABUW_2690 SM00357 Cold shock protein domain ABUW_2695 SM00530 Helix-turn-helix XRE-family like proteins ABUW_2706 SM00422 helix_turn_helix, mercury resistance ABUW_2718 SM00382 ATPases associated with a variety of cellular activities ABUW_2718 SM00487 DEAD-like helicases superfamily ABUW_2718 SM00490 helicase superfamily c-terminal domain ABUW_2718 SM00847 Helicase associated domain (HA2) Add an annotation ABUW_2734 SM00981 ABUW_2734 ABUW_2737 SM00382 ATPases associated with a variety of cellular activities ABUW_2737 SM01086 C-terminal, D2-small domain, of ClpB protein ABUW_2741 SM00100 Cyclic nucleotide-monophosphate binding domain ABUW_2741 SM00419 helix_turn_helix, cAMP Regulatory protein ABUW_2745 SM00788 Adenylosuccinate synthetase ABUW_2747 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABUW_2748 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABUW_2766 SM00342 helix_turn_helix, arabinose operon control protein ABUW_2775 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_2775 SM00895 ABUW_2775 ABUW_2776 SM00347 helix_turn_helix multiple antibiotic resistance protein ABUW_2786 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_2786 SM00895 ABUW_2786 ABUW_2788 SM01130 ABUW_2788 ABUW_2789 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ABUW_2791 SM00858 ABUW_2791 ABUW_2793 SM00342 helix_turn_helix, arabinose operon control protein ABUW_2801 SM00344 helix_turn_helix ASNC type ABUW_2804 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_2804 SM00895 ABUW_2804 ABUW_2824 SM00267 diguanylate cyclase ABUW_2826 SM00479 ABUW_2826 ABUW_2836 SM00382 ATPases associated with a variety of cellular activities ABUW_2840 SM00257 Lysin motif ABUW_2841 SM00479 ABUW_2841 ABUW_2852 SM00422 helix_turn_helix, mercury resistance ABUW_2856 SM01011 Aminopeptidase P, N-terminal domain ABUW_2865 SM00382 ATPases associated with a variety of cellular activities ABUW_2865 SM00464 Found in ATP-dependent protease La (LON) ABUW_2869 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABUW_2871 SM00478 endonuclease III ABUW_2881 SM00988 UreE urease accessory protein, N-terminal domain ABUW_2890 SM01091 Transporter associated domain ABUW_2911 SM00382 ATPases associated with a variety of cellular activities ABUW_2913 SM00947 Carbonic anhydrase ABUW_2926 SM01018 B12 binding domain ABUW_2927 SM00861 Transketolase, pyrimidine binding domain ABUW_2930 SM00822 ABUW_2930 ABUW_2935 SM00342 helix_turn_helix, arabinose operon control protein ABUW_2954 SM00346 helix_turn_helix isocitrate lyase regulation ABUW_2962 SM01322 ABUW_2962 ABUW_2985 SM00965 Secretin and TonB N terminus short domain ABUW_2989 SM01130 ABUW_2989 ABUW_3000 SM00487 DEAD-like helicases superfamily ABUW_3000 SM00490 helicase superfamily c-terminal domain ABUW_3013 SM01040 BRO family, N-terminal domain ABUW_3022 SM01004 Delta-aminolevulinic acid dehydratase ABUW_3031 SM00382 ATPases associated with a variety of cellular activities ABUW_3046 SM00563 Phosphate acyltransferases ABUW_3053 SM00843 ABUW_3053 ABUW_3061 SM00838 Elongation factor G C-terminus ABUW_3061 SM00889 Elongation factor G, domain IV ABUW_3065 SM00825 Beta-ketoacyl synthase ABUW_3077 SM01329 ABUW_3077 ABUW_3086 SM00363 S4 RNA-binding domain ABUW_3088 SM00400 zinc finger ABUW_3088 SM00493 ABUW_3088 ABUW_3090 SM00028 Tetratricopeptide repeats ABUW_3097 SM01400 ABUW_3097 ABUW_3106 SM00257 Lysin motif ABUW_3108 SM00822 ABUW_3108 ABUW_3109 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ABUW_3116 SM00363 S4 RNA-binding domain ABUW_3127 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABUW_3127 SM00292 breast cancer carboxy-terminal domain ABUW_3127 SM00532 Ligase N family ABUW_3128 SM00771 ZipA, C-terminal domain (FtsZ-binding) ABUW_3130 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_3134 SM00382 ATPases associated with a variety of cellular activities ABUW_3134 SM00962 SRP54-type protein, GTPase domain ABUW_3134 SM00963 SRP54-type protein, helical bundle domain ABUW_3163 SM00357 Cold shock protein domain ABUW_3172 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABUW_3172 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABUW_3173 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABUW_3178 SM00267 diguanylate cyclase ABUW_3180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABUW_3180 SM00387 Histidine kinase-like ATPases ABUW_3180 SM00388 His Kinase A (phosphoacceptor) domain ABUW_3181 SM00448 cheY-homologous receiver domain ABUW_3181 SM00862 Transcriptional regulatory protein, C terminal ABUW_3196 SM00903 Flavin reductase like domain ABUW_3203 SM00342 helix_turn_helix, arabinose operon control protein ABUW_3260 SM00331 Sigma factor PP2C-like phosphatases ABUW_3264 SM00347 helix_turn_helix multiple antibiotic resistance protein ABUW_3266 SM00382 ATPases associated with a variety of cellular activities ABUW_3270 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ABUW_3270 SM00474 3'-5' exonuclease ABUW_3270 SM00475 5'-3' exonuclease ABUW_3270 SM00482 DNA polymerase A domain ABUW_3273 SM00977 TilS substrate C-terminal domain ABUW_3277 SM00357 Cold shock protein domain ABUW_3277 SM00382 ATPases associated with a variety of cellular activities ABUW_3277 SM00959 Rho termination factor, N-terminal domain ABUW_3279 SM00411 bacterial (prokaryotic) histone like domain ABUW_3280 SM00873 B3/4 domain ABUW_3280 SM00874 tRNA synthetase B5 domain ABUW_3280 SM00896 Ferredoxin-fold anticodon binding domain ABUW_3290 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABUW_3299 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABUW_3302 SM00954 Region found in RelA / SpoT proteins ABUW_3306 SM00073 Histidine Phosphotransfer domain ABUW_3306 SM00387 Histidine kinase-like ATPases ABUW_3306 SM00388 His Kinase A (phosphoacceptor) domain ABUW_3306 SM00448 cheY-homologous receiver domain ABUW_3314 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ABUW_3314 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ABUW_3319 SM00530 Helix-turn-helix XRE-family like proteins ABUW_3323 SM00448 cheY-homologous receiver domain ABUW_3323 SM00862 Transcriptional regulatory protein, C terminal ABUW_3324 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABUW_3324 SM00387 Histidine kinase-like ATPases ABUW_3324 SM00388 His Kinase A (phosphoacceptor) domain ABUW_3325 SM00746 metallochaperone-like domain ABUW_3351 SM01236 ABUW_3351 ABUW_3354 SM00052 Putative diguanylate phosphodiesterase ABUW_3354 SM00267 diguanylate cyclase ABUW_3363 SM00382 ATPases associated with a variety of cellular activities ABUW_3367 SM00479 ABUW_3367 ABUW_3369 SM00450 Rhodanese Homology Domain ABUW_3374 SM00564 beta-propeller repeat ABUW_3379 SM00028 Tetratricopeptide repeats ABUW_3381 SM00562 ABUW_3381 ABUW_3383 SM00014 Acid phosphatase homologues ABUW_3385 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABUW_3385 SM00245 tail specific protease ABUW_3400 SM00382 ATPases associated with a variety of cellular activities ABUW_3400 SM00994 ClpX C4-type zinc finger ABUW_3400 SM01086 C-terminal, D2-small domain, of ClpB protein ABUW_3404 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. ABUW_3405 SM00917 LeuA allosteric (dimerisation) domain ABUW_3408 SM00671 Sel1-like repeats. ABUW_3436 SM00360 RNA recognition motif ABUW_3440 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ABUW_3440 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ABUW_3440 SM00493 ABUW_3440 ABUW_3443 SM00829 Enoylreductase ABUW_3445 SM00382 ATPases associated with a variety of cellular activities ABUW_3451 SM00859 Semialdehyde dehydrogenase, NAD binding domain ABUW_3454 SM00870 ABUW_3454 ABUW_3456 SM00342 helix_turn_helix, arabinose operon control protein ABUW_3457 SM00316 Ribosomal protein S1-like RNA-binding domain ABUW_3460 SM01329 ABUW_3460 ABUW_3468 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ABUW_3476 SM00363 S4 RNA-binding domain ABUW_3478 SM00316 Ribosomal protein S1-like RNA-binding domain ABUW_3484 SM00729 Elongator protein 3, MiaB family, Radical SAM ABUW_3497 SM00849 Metallo-beta-lactamase superfamily ABUW_3505 SM00116 Domain in cystathionine beta-synthase and other proteins. ABUW_3505 SM01091 Transporter associated domain ABUW_3511 SM00487 DEAD-like helicases superfamily ABUW_3511 SM00490 helicase superfamily c-terminal domain ABUW_3515 SM00271 DnaJ molecular chaperone homology domain ABUW_3518 SM00316 Ribosomal protein S1-like RNA-binding domain ABUW_3518 SM00322 K homology RNA-binding domain ABUW_3519 SM01387 ABUW_3519 ABUW_3521 SM00382 ATPases associated with a variety of cellular activities ABUW_3542 SM00316 Ribosomal protein S1-like RNA-binding domain ABUW_3554 SM00967 RNA 2'-O ribose methyltransferase substrate binding ABUW_3556 SM00028 Tetratricopeptide repeats ABUW_3559 SM00732 Likely ribonuclease with RNase H fold. ABUW_3563 SM00346 helix_turn_helix isocitrate lyase regulation ABUW_3565 SM00342 helix_turn_helix, arabinose operon control protein ABUW_3568 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABUW_3568 SM00465 GIY-YIG type nucleases (URI domain) ABUW_3576 SM00422 helix_turn_helix, mercury resistance ABUW_3581 SM00387 Histidine kinase-like ATPases ABUW_3589 SM00663 RNA polymerase I subunit A N-terminus ABUW_3594 SM00649 Ribosomal protein L11/L12 ABUW_3595 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ABUW_3595 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ABUW_3605 SM00240 Forkhead associated domain ABUW_3607 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABUW_3609 SM00528 Domain in histone-like proteins of HNS family ABUW_3615 SM00448 cheY-homologous receiver domain ABUW_3615 SM00850 LytTr DNA-binding domain ABUW_3633 SM00899 ABUW_3633 ABUW_3639 SM00421 helix_turn_helix, Lux Regulon ABUW_3639 SM00448 cheY-homologous receiver domain ABUW_3640 SM00387 Histidine kinase-like ATPases ABUW_3640 SM00388 His Kinase A (phosphoacceptor) domain ABUW_3641 SM00382 ATPases associated with a variety of cellular activities ABUW_3641 SM00448 cheY-homologous receiver domain ABUW_3642 SM00245 tail specific protease ABUW_3655 SM00938 Nitrogen regulatory protein P-II ABUW_3665 SM00422 helix_turn_helix, mercury resistance ABUW_3668 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABUW_3669 SM00226 Low molecular weight phosphatase family ABUW_3676 SM00382 ATPases associated with a variety of cellular activities ABUW_3680 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_3681 SM01007 Class II Aldolase and Adducin N-terminal domain ABUW_3682 SM01130 ABUW_3682 ABUW_3690 SM00434 DNA Topoisomerase IV ABUW_3694 SM01091 Transporter associated domain ABUW_3698 SM00641 Glycosyl hydrolases family 25 ABUW_3703 SM00729 Elongator protein 3, MiaB family, Radical SAM ABUW_3705 SM00422 helix_turn_helix, mercury resistance ABUW_3728 SM00342 helix_turn_helix, arabinose operon control protein ABUW_3732 SM00382 ATPases associated with a variety of cellular activities ABUW_3742 SM00382 ATPases associated with a variety of cellular activities ABUW_3746 SM00919 Malic enzyme, NAD binding domain ABUW_3746 SM01274 ABUW_3746 ABUW_3747 SM00836 DALR anticodon binding domain ABUW_3747 SM01016 Arginyl tRNA synthetase N terminal dom ABUW_3770 SM00823 Phosphopantetheine attachment site ABUW_3770 SM00824 Thioesterase ABUW_3771 SM00823 Phosphopantetheine attachment site ABUW_3771 SM01294 ABUW_3771 ABUW_3774 SM00421 helix_turn_helix, Lux Regulon ABUW_3788 SM01005 Alanine racemase, C-terminal domain ABUW_3790 SM00344 helix_turn_helix ASNC type ABUW_3809 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_3809 SM00895 ABUW_3809 ABUW_3813 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABUW_3813 SM00895 ABUW_3813 ABUW_3818 SM00984 UDP binding domain ABUW_3828 SM00984 UDP binding domain ABUW_3830 SM00984 UDP binding domain ABUW_3832 SM00226 Low molecular weight phosphatase family ABUW_3837 SM00644 ABUW_3837 ABUW_3853 SM00062 Bacterial periplasmic substrate-binding proteins ABUW_3854 SM00062 Bacterial periplasmic substrate-binding proteins ABUW_3857 SM00382 ATPases associated with a variety of cellular activities ABUW_3861 SM00904 Riboflavin kinase ABUW_3866 SM00248 ankyrin repeats ABUW_3876 SM00849 Metallo-beta-lactamase superfamily ABUW_3880 SM00235 Zinc-dependent metalloprotease ABUW_3881 SM00235 Zinc-dependent metalloprotease ABUW_3886 SM01001 AIR carboxylase ABUW_3890 SM00014 Acid phosphatase homologues ABUW_3904 SM01234 ABUW_3904 ABUW_4012 SM00318 Staphylococcal nuclease homologues ABUW_4013 SM00528 Domain in histone-like proteins of HNS family ABUW_4024 SM00470 ParB-like nuclease domain ABUW_4037 SM00530 Helix-turn-helix XRE-family like proteins ABUW_4092 SM00857 Resolvase, N terminal domain ABUW_5004 SM00671 Sel1-like repeats.