locus-tag class description JWB56_00040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_00040 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_00040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_00045 PF00440 Bacterial regulatory proteins, tetR family JWB56_00045 PF17932 Tetracyclin repressor-like, C-terminal domain JWB56_00060 PF01039 Carboxyl transferase domain JWB56_00065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_00065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_00065 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_00075 PF00364 Biotin-requiring enzyme JWB56_00075 PF00289 Biotin carboxylase, N-terminal domain JWB56_00075 PF02785 Biotin carboxylase C-terminal domain JWB56_00075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JWB56_00085 PF04386 Stringent starvation protein B JWB56_00090 PF13417 Glutathione S-transferase, N-terminal domain JWB56_00090 PF00043 Glutathione S-transferase, C-terminal domain JWB56_00095 PF00380 Ribosomal protein S9/S16 JWB56_00100 PF00572 Ribosomal protein L13 JWB56_00105 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JWB56_00110 PF00398 Ribosomal RNA adenine dimethylase JWB56_00115 PF00149 Calcineurin-like phosphoesterase JWB56_00135 PF01926 50S ribosome-binding GTPase JWB56_00135 PF13167 GTP-binding GTPase N-terminal JWB56_00135 PF16360 GTP-binding GTPase Middle Region JWB56_00145 PF13091 PLD-like domain JWB56_00150 PF00149 Calcineurin-like phosphoesterase JWB56_00150 PF10518 TAT (twin-arginine translocation) pathway signal sequence JWB56_00155 PF00691 OmpA family JWB56_00155 PF01389 OmpA-like transmembrane domain JWB56_00160 PF00990 Diguanylate cyclase, GGDEF domain JWB56_00160 PF17152 Periplasmic sensor domain JWB56_00195 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_00195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JWB56_00205 PF04273 Putative phosphatase (DUF442) JWB56_00205 PF00753 Metallo-beta-lactamase superfamily JWB56_00210 PF00561 alpha/beta hydrolase fold JWB56_00215 PF00085 Thioredoxin JWB56_00220 PF03061 Thioesterase superfamily JWB56_00230 PF04461 Protein of unknown function (DUF520) JWB56_00240 PF01266 FAD dependent oxidoreductase JWB56_00240 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JWB56_00250 PF03795 YCII-related domain JWB56_00255 PF04279 Intracellular septation protein A JWB56_00260 PF02811 PHP domain JWB56_00265 PF01062 Bestrophin, RFP-TM, chloride channel JWB56_00270 PF04002 RadC-like JAB domain JWB56_00275 PF02441 Flavoprotein JWB56_00275 PF04127 DNA / pantothenate metabolism flavoprotein JWB56_00280 PF02355 Protein export membrane protein JWB56_00280 PF07549 SecD/SecF GG Motif JWB56_00285 PF07549 SecD/SecF GG Motif JWB56_00285 PF13721 SecD export protein N-terminal TM region JWB56_00285 PF02355 Protein export membrane protein JWB56_00290 PF02699 Preprotein translocase subunit JWB56_00295 PF01702 Queuine tRNA-ribosyltransferase JWB56_00310 PF02547 Queuosine biosynthesis protein JWB56_00335 PF00929 Exonuclease JWB56_00340 PF00436 Single-strand binding protein family JWB56_00385 PF10549 ORF11CD3 domain JWB56_00385 PF09669 Phage regulatory protein Rha (Phage_pRha) JWB56_00395 PF03120 NAD-dependent DNA ligase OB-fold domain JWB56_00395 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JWB56_00395 PF00533 BRCA1 C Terminus (BRCT) domain JWB56_00395 PF12826 Helix-hairpin-helix motif JWB56_00395 PF01653 NAD-dependent DNA ligase adenylation domain JWB56_00435 PF00905 Penicillin binding protein transpeptidase domain JWB56_00500 PF01471 Putative peptidoglycan binding domain JWB56_00500 PF01510 N-acetylmuramoyl-L-alanine amidase JWB56_00550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_00550 PF00512 His Kinase A (phospho-acceptor) domain JWB56_00550 PF07689 KaiB domain JWB56_00555 PF08335 GlnD PII-uridylyltransferase JWB56_00555 PF03710 Glutamate-ammonia ligase adenylyltransferase JWB56_00560 PF01063 Amino-transferase class IV JWB56_00575 PF01522 Polysaccharide deacetylase JWB56_00580 PF00535 Glycosyl transferase family 2 JWB56_00585 PF13439 Glycosyltransferase Family 4 JWB56_00585 PF00534 Glycosyl transferases group 1 JWB56_00615 PF00152 tRNA synthetases class II (D, K and N) JWB56_00615 PF01336 OB-fold nucleic acid binding domain JWB56_00615 PF02938 GAD domain JWB56_00625 PF07715 TonB-dependent Receptor Plug Domain JWB56_00625 PF00593 TonB dependent receptor JWB56_00645 PF06146 Phosphate-starvation-inducible E JWB56_00650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_00650 PF12806 Acetyl-CoA dehydrogenase C-terminal like JWB56_00650 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_00650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_00655 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_00655 PF12806 Acetyl-CoA dehydrogenase C-terminal like JWB56_00655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_00655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_00665 PF00512 His Kinase A (phospho-acceptor) domain JWB56_00665 PF00672 HAMP domain JWB56_00665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_00670 PF00486 Transcriptional regulatory protein, C terminal JWB56_00670 PF00072 Response regulator receiver domain JWB56_00675 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JWB56_00695 PF01923 Cobalamin adenosyltransferase JWB56_00700 PF00593 TonB dependent receptor JWB56_00700 PF07715 TonB-dependent Receptor Plug Domain JWB56_00705 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JWB56_00710 PF00291 Pyridoxal-phosphate dependent enzyme JWB56_00735 PF00290 Tryptophan synthase alpha chain JWB56_00740 PF01039 Carboxyl transferase domain JWB56_00745 PF08245 Mur ligase middle domain JWB56_00745 PF02875 Mur ligase family, glutamate ligase domain JWB56_00760 PF00753 Metallo-beta-lactamase superfamily JWB56_00765 PF10417 C-terminal domain of 1-Cys peroxiredoxin JWB56_00765 PF00578 AhpC/TSA family JWB56_00770 PF07516 SecA Wing and Scaffold domain JWB56_00770 PF01043 SecA preprotein cross-linking domain JWB56_00770 PF07517 SecA DEAD-like domain JWB56_00770 PF02810 SEC-C motif JWB56_00780 PF07690 Major Facilitator Superfamily JWB56_00780 PF00083 Sugar (and other) transporter JWB56_00785 PF03006 Haemolysin-III related JWB56_00795 PF13673 Acetyltransferase (GNAT) domain JWB56_00810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JWB56_00810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JWB56_00810 PF00378 Enoyl-CoA hydratase/isomerase JWB56_00815 PF02803 Thiolase, C-terminal domain JWB56_00815 PF00108 Thiolase, N-terminal domain JWB56_00820 PF12833 Helix-turn-helix domain JWB56_00820 PF02311 AraC-like ligand binding domain JWB56_00825 PF02515 CoA-transferase family III JWB56_00830 PF04966 Carbohydrate-selective porin, OprB family JWB56_00835 PF01011 PQQ enzyme repeat JWB56_00840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JWB56_00840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JWB56_00850 PF00893 Small Multidrug Resistance protein JWB56_00860 PF02803 Thiolase, C-terminal domain JWB56_00860 PF00108 Thiolase, N-terminal domain JWB56_00870 PF13505 Outer membrane protein beta-barrel domain JWB56_00870 PF00691 OmpA family JWB56_00880 PF01139 tRNA-splicing ligase RtcB JWB56_00885 PF00324 Amino acid permease JWB56_00890 PF05175 Methyltransferase small domain JWB56_00890 PF08468 Methyltransferase small domain N-terminal JWB56_00895 PF00860 Permease family JWB56_00900 PF03144 Elongation factor Tu domain 2 JWB56_00900 PF00009 Elongation factor Tu GTP binding domain JWB56_00900 PF00679 Elongation factor G C-terminus JWB56_00905 PF01741 Large-conductance mechanosensitive channel, MscL JWB56_00920 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JWB56_00920 PF06827 Zinc finger found in FPG and IleRS JWB56_00920 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JWB56_00925 PF02245 Methylpurine-DNA glycosylase (MPG) JWB56_00930 PF07715 TonB-dependent Receptor Plug Domain JWB56_00930 PF00593 TonB dependent receptor JWB56_00935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JWB56_00950 PF13098 Thioredoxin-like domain JWB56_00950 PF10411 Disulfide bond isomerase protein N-terminus JWB56_00955 PF01571 Aminomethyltransferase folate-binding domain JWB56_00965 PF04343 Protein of unknown function, DUF488 JWB56_00970 PF08274 PhnA Zinc-Ribbon JWB56_00970 PF03831 PhnA domain JWB56_00980 PF07411 Domain of unknown function (DUF1508) JWB56_00985 PF03129 Anticodon binding domain JWB56_00985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JWB56_00985 PF04073 Aminoacyl-tRNA editing domain JWB56_00990 PF00873 AcrB/AcrD/AcrF family JWB56_01005 PF00072 Response regulator receiver domain JWB56_01010 PF00072 Response regulator receiver domain JWB56_01015 PF01584 CheW-like domain JWB56_01020 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JWB56_01020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JWB56_01025 PF01584 CheW-like domain JWB56_01025 PF00072 Response regulator receiver domain JWB56_01025 PF01627 Hpt domain JWB56_01025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_01045 PF01546 Peptidase family M20/M25/M40 JWB56_01045 PF07687 Peptidase dimerisation domain JWB56_01060 PF04304 Protein of unknown function (DUF454) JWB56_01065 PF17969 L,D-transpeptidase C-terminal domain JWB56_01065 PF03734 L,D-transpeptidase catalytic domain JWB56_01105 PF00175 Oxidoreductase NAD-binding domain JWB56_01105 PF00258 Flavodoxin JWB56_01105 PF00667 FAD binding domain JWB56_01115 PF12805 FUSC-like inner membrane protein yccS JWB56_01120 PF07690 Major Facilitator Superfamily JWB56_01125 PF00881 Nitroreductase family JWB56_01140 PF01235 Sodium:alanine symporter family JWB56_01145 PF01734 Patatin-like phospholipase JWB56_01150 PF00291 Pyridoxal-phosphate dependent enzyme JWB56_01150 PF13291 ACT domain JWB56_01155 PF05992 SbmA/BacA-like family JWB56_01180 PF02934 GatB/GatE catalytic domain JWB56_01180 PF02637 GatB domain JWB56_01185 PF01425 Amidase JWB56_01190 PF02686 Glu-tRNAGln amidotransferase C subunit JWB56_01200 PF04085 rod shape-determining protein MreC JWB56_01205 PF04093 rod shape-determining protein MreD JWB56_01210 PF02545 Maf-like protein JWB56_01215 PF00575 S1 RNA binding domain JWB56_01215 PF10150 Ribonuclease E/G family JWB56_01225 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain JWB56_01225 PF06974 Protein of unknown function (DUF1298) JWB56_01230 PF01507 Phosphoadenosine phosphosulfate reductase family JWB56_01245 PF02525 Flavodoxin-like fold JWB56_01265 PF02673 Bacitracin resistance protein BacA JWB56_01270 PF12833 Helix-turn-helix domain JWB56_01270 PF06719 AraC-type transcriptional regulator N-terminus JWB56_01275 PF00109 Beta-ketoacyl synthase, N-terminal domain JWB56_01275 PF08659 KR domain JWB56_01275 PF02801 Beta-ketoacyl synthase, C-terminal domain JWB56_01275 PF00698 Acyl transferase domain JWB56_01275 PF08240 Alcohol dehydrogenase GroES-like domain JWB56_01275 PF08990 Erythronolide synthase docking JWB56_01275 PF09277 Erythronolide synthase, docking JWB56_01275 PF16197 Ketoacyl-synthetase C-terminal extension JWB56_01275 PF14765 Polyketide synthase dehydratase JWB56_01275 PF00550 Phosphopantetheine attachment site JWB56_01280 PF01965 DJ-1/PfpI family JWB56_01375 PF03796 DnaB-like helicase C terminal domain JWB56_01375 PF00772 DnaB-like helicase N terminal domain JWB56_01375 PF14528 LAGLIDADG-like domain JWB56_01420 PF00149 Calcineurin-like phosphoesterase JWB56_01600 PF03869 Arc-like DNA binding domain JWB56_01670 PF13356 Arm DNA-binding domain JWB56_01670 PF00589 Phage integrase family JWB56_01680 PF00324 Amino acid permease JWB56_01685 PF04303 PrpF protein JWB56_01690 PF00348 Polyprenyl synthetase JWB56_01695 PF04237 YjbR JWB56_01700 PF01145 SPFH domain / Band 7 family JWB56_01710 PF01734 Patatin-like phospholipase JWB56_01730 PF08019 Phosphoethanolamine transferase EptA/EptB JWB56_01730 PF00884 Sulfatase JWB56_01735 PF00486 Transcriptional regulatory protein, C terminal JWB56_01735 PF00072 Response regulator receiver domain JWB56_01740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_01740 PF08521 Two-component sensor kinase N-terminal JWB56_01740 PF00512 His Kinase A (phospho-acceptor) domain JWB56_01750 PF00909 Ammonium Transporter Family JWB56_01755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_01755 PF03466 LysR substrate binding domain JWB56_01775 PF10458 Valyl tRNA synthetase tRNA binding arm JWB56_01775 PF00133 tRNA synthetases class I (I, L, M and V) JWB56_01775 PF08264 Anticodon-binding domain of tRNA JWB56_01795 PF01906 Putative heavy-metal-binding JWB56_01800 PF01906 Putative heavy-metal-binding JWB56_01805 PF02321 Outer membrane efflux protein JWB56_01810 PF00873 AcrB/AcrD/AcrF family JWB56_01815 PF00529 HlyD membrane-fusion protein of T1SS JWB56_01815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JWB56_01820 PF01569 PAP2 superfamily JWB56_01830 PF00348 Polyprenyl synthetase JWB56_01840 PF00829 Ribosomal prokaryotic L21 protein JWB56_01845 PF01016 Ribosomal L27 protein JWB56_01850 PF03548 Outer membrane lipoprotein carrier protein LolA JWB56_01860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JWB56_01860 PF02403 Seryl-tRNA synthetase N-terminal domain JWB56_01865 PF10414 Sirohaem synthase dimerisation region JWB56_01865 PF14824 Sirohaem biosynthesis protein central JWB56_01865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JWB56_01870 PF00588 SpoU rRNA Methylase family JWB56_01875 PF01638 HxlR-like helix-turn-helix JWB56_01880 PF03358 NADPH-dependent FMN reductase JWB56_01885 PF13520 Amino acid permease JWB56_01890 PF00465 Iron-containing alcohol dehydrogenase JWB56_01900 PF03099 Biotin/lipoate A/B protein ligase family JWB56_01905 PF04359 Protein of unknown function (DUF493) JWB56_01910 PF04545 Sigma-70, region 4 JWB56_01910 PF04539 Sigma-70 region 3 JWB56_01910 PF04542 Sigma-70 region 2 JWB56_01910 PF00140 Sigma-70 factor, region 1.2 JWB56_01910 PF04546 Sigma-70, non-essential region JWB56_01910 PF03979 Sigma-70 factor, region 1.1 JWB56_01925 PF17773 UPF0176 acylphosphatase like domain JWB56_01925 PF00581 Rhodanese-like domain JWB56_01935 PF00285 Citrate synthase, C-terminal domain JWB56_01940 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JWB56_01945 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JWB56_01950 PF00890 FAD binding domain JWB56_01950 PF02910 Fumarate reductase flavoprotein C-term JWB56_01955 PF13085 2Fe-2S iron-sulfur cluster binding domain JWB56_01970 PF02779 Transketolase, pyrimidine binding domain JWB56_01970 PF16870 2-oxoglutarate dehydrogenase C-terminal JWB56_01970 PF00676 Dehydrogenase E1 component JWB56_01970 PF16078 2-oxoglutarate dehydrogenase N-terminus JWB56_01975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JWB56_01975 PF02817 e3 binding domain JWB56_01975 PF00364 Biotin-requiring enzyme JWB56_01980 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JWB56_01980 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_01985 PF00549 CoA-ligase JWB56_01985 PF08442 ATP-grasp domain JWB56_01990 PF00549 CoA-ligase JWB56_01990 PF02629 CoA binding domain JWB56_02005 PF00579 tRNA synthetases class I (W and Y) JWB56_02010 PF05661 Protein of unknown function (DUF808) JWB56_02015 PF04228 Putative neutral zinc metallopeptidase JWB56_02020 PF00999 Sodium/hydrogen exchanger family JWB56_02035 PF09587 Bacterial capsule synthesis protein PGA_cap JWB56_02045 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JWB56_02050 PF00582 Universal stress protein family JWB56_02055 PF00132 Bacterial transferase hexapeptide (six repeats) JWB56_02060 PF01272 Transcription elongation factor, GreA/GreB, C-term JWB56_02060 PF03449 Transcription elongation factor, N-terminal JWB56_02065 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JWB56_02065 PF02142 MGS-like domain JWB56_02065 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JWB56_02070 PF00117 Glutamine amidotransferase class-I JWB56_02070 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JWB56_02085 PF01985 CRS1 / YhbY (CRM) domain JWB56_02090 PF01728 FtsJ-like methyltransferase JWB56_02095 PF01434 Peptidase family M41 JWB56_02095 PF00004 ATPase family associated with various cellular activities (AAA) JWB56_02095 PF06480 FtsH Extracellular JWB56_02095 PF17862 AAA+ lid domain JWB56_02100 PF00809 Pterin binding enzyme JWB56_02120 PF16655 PhoD-like phosphatase, N-terminal domain JWB56_02120 PF09423 PhoD-like phosphatase JWB56_02135 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JWB56_02135 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JWB56_02150 PF00083 Sugar (and other) transporter JWB56_02155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JWB56_02155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JWB56_02160 PF01266 FAD dependent oxidoreductase JWB56_02160 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JWB56_02165 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain JWB56_02165 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain JWB56_02185 PF00166 Chaperonin 10 Kd subunit JWB56_02190 PF00118 TCP-1/cpn60 chaperonin family JWB56_02195 PF01219 Prokaryotic diacylglycerol kinase JWB56_02200 PF00753 Metallo-beta-lactamase superfamily JWB56_02205 PF03009 Glycerophosphoryl diester phosphodiesterase family JWB56_02210 PF00873 AcrB/AcrD/AcrF family JWB56_02220 PF01435 Peptidase family M48 JWB56_02225 PF01464 Transglycosylase SLT domain JWB56_02230 PF01171 PP-loop family JWB56_02240 PF01464 Transglycosylase SLT domain JWB56_02240 PF00497 Bacterial extracellular solute-binding proteins, family 3 JWB56_02245 PF01272 Transcription elongation factor, GreA/GreB, C-term JWB56_02245 PF03449 Transcription elongation factor, N-terminal JWB56_02260 PF00668 Condensation domain JWB56_02260 PF13193 AMP-binding enzyme C-terminal domain JWB56_02260 PF00501 AMP-binding enzyme JWB56_02260 PF00975 Thioesterase domain JWB56_02260 PF00550 Phosphopantetheine attachment site JWB56_02280 PF00881 Nitroreductase family JWB56_02295 PF02595 Glycerate kinase family JWB56_02300 PF00384 Molybdopterin oxidoreductase JWB56_02305 PF02634 FdhD/NarQ family JWB56_02310 PF06803 Protein of unknown function (DUF1232) JWB56_02315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JWB56_02315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JWB56_02315 PF11890 Domain of unknown function (DUF3410) JWB56_02320 PF00152 tRNA synthetases class II (D, K and N) JWB56_02330 PF18073 Rubredoxin metal binding domain JWB56_02335 PF00324 Amino acid permease JWB56_02345 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JWB56_02345 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JWB56_02350 PF01678 Diaminopimelate epimerase JWB56_02355 PF00561 alpha/beta hydrolase fold JWB56_02360 PF01810 LysE type translocator JWB56_02365 PF00589 Phage integrase family JWB56_02365 PF02899 Phage integrase, N-terminal SAM-like domain JWB56_02370 PF01012 Electron transfer flavoprotein domain JWB56_02375 PF01012 Electron transfer flavoprotein domain JWB56_02375 PF00766 Electron transfer flavoprotein FAD-binding domain JWB56_02380 PF00521 DNA gyrase/topoisomerase IV, subunit A JWB56_02380 PF03989 DNA gyrase C-terminal domain, beta-propeller JWB56_02395 PF00535 Glycosyl transferase family 2 JWB56_02415 PF13533 Biotin-lipoyl like JWB56_02425 PF00266 Aminotransferase class-V JWB56_02440 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JWB56_02450 PF02687 FtsX-like permease family JWB56_02450 PF12704 MacB-like periplasmic core domain JWB56_02455 PF00005 ABC transporter JWB56_02460 PF13567 Domain of unknown function (DUF4131) JWB56_02460 PF03772 Competence protein JWB56_02460 PF00753 Metallo-beta-lactamase superfamily JWB56_02470 PF06965 Na+/H+ antiporter 1 JWB56_02470 PF01343 Peptidase family S49 JWB56_02475 PF12697 Alpha/beta hydrolase family JWB56_02480 PF00551 Formyl transferase JWB56_02485 PF00586 AIR synthase related protein, N-terminal domain JWB56_02485 PF02769 AIR synthase related protein, C-terminal domain JWB56_02490 PF01594 AI-2E family transporter JWB56_02495 PF11638 DnaA N-terminal domain JWB56_02495 PF08299 Bacterial dnaA protein helix-turn-helix JWB56_02495 PF00308 Bacterial dnaA protein JWB56_02525 PF00588 SpoU rRNA Methylase family JWB56_02525 PF08032 RNA 2'-O ribose methyltransferase substrate binding JWB56_02530 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JWB56_02540 PF00691 OmpA family JWB56_02545 PF07676 WD40-like Beta Propeller Repeat JWB56_02545 PF04052 TolB amino-terminal domain JWB56_02555 PF02472 Biopolymer transport protein ExbD/TolR JWB56_02560 PF01618 MotA/TolQ/ExbB proton channel family JWB56_02565 PF03061 Thioesterase superfamily JWB56_02570 PF07687 Peptidase dimerisation domain JWB56_02570 PF01546 Peptidase family M20/M25/M40 JWB56_02575 PF05496 Holliday junction DNA helicase RuvB P-loop domain JWB56_02575 PF05491 RuvB C-terminal winged helix domain JWB56_02575 PF17864 RuvB AAA lid domain JWB56_02580 PF07499 RuvA, C-terminal domain JWB56_02580 PF01330 RuvA N terminal domain JWB56_02585 PF01966 HD domain JWB56_02590 PF02769 AIR synthase related protein, C-terminal domain JWB56_02590 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JWB56_02590 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JWB56_02595 PF07690 Major Facilitator Superfamily JWB56_02600 PF01784 NIF3 (NGG1p interacting factor 3) JWB56_02605 PF00378 Enoyl-CoA hydratase/isomerase JWB56_02610 PF00293 NUDIX domain JWB56_02610 PF01467 Cytidylyltransferase-like JWB56_02620 PF00578 AhpC/TSA family JWB56_02635 PF06508 Queuosine biosynthesis protein QueC JWB56_02645 PF00132 Bacterial transferase hexapeptide (six repeats) JWB56_02645 PF14602 Hexapeptide repeat of succinyl-transferase JWB56_02645 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JWB56_02655 PF03466 LysR substrate binding domain JWB56_02655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_02660 PF00005 ABC transporter JWB56_02660 PF12857 TOBE-like domain JWB56_02665 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_02670 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_02685 PF01063 Amino-transferase class IV JWB56_02690 PF02618 YceG-like family JWB56_02695 PF02223 Thymidylate kinase JWB56_02705 PF00890 FAD binding domain JWB56_02705 PF02910 Fumarate reductase flavoprotein C-term JWB56_02710 PF13180 PDZ domain JWB56_02720 PF00009 Elongation factor Tu GTP binding domain JWB56_02720 PF03144 Elongation factor Tu domain 2 JWB56_02720 PF06421 GTP-binding protein LepA C-terminus JWB56_02720 PF00679 Elongation factor G C-terminus JWB56_02725 PF10502 Signal peptidase, peptidase S26 JWB56_02735 PF14622 Ribonuclease-III-like JWB56_02735 PF00035 Double-stranded RNA binding motif JWB56_02740 PF07650 KH domain JWB56_02740 PF01926 50S ribosome-binding GTPase JWB56_02750 PF02565 Recombination protein O C terminal JWB56_02750 PF11967 Recombination protein O N terminal JWB56_02755 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JWB56_02760 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JWB56_02765 PF00106 short chain dehydrogenase JWB56_02795 PF00155 Aminotransferase class I and II JWB56_02815 PF17757 UvrB interaction domain JWB56_02815 PF00271 Helicase conserved C-terminal domain JWB56_02815 PF12344 Ultra-violet resistance protein B JWB56_02815 PF02151 UvrB/uvrC motif JWB56_02815 PF04851 Type III restriction enzyme, res subunit JWB56_02825 PF00892 EamA-like transporter family JWB56_02830 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JWB56_02830 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JWB56_02845 PF01926 50S ribosome-binding GTPase JWB56_02845 PF01018 GTP1/OBG JWB56_02850 PF00696 Amino acid kinase family JWB56_02850 PF01472 PUA domain JWB56_02860 PF07759 Protein of unknown function (DUF1615) JWB56_02865 PF01207 Dihydrouridine synthase (Dus) JWB56_02870 PF03060 Nitronate monooxygenase JWB56_02885 PF02350 UDP-N-acetylglucosamine 2-epimerase JWB56_02915 PF03441 FAD binding domain of DNA photolyase JWB56_02915 PF00875 DNA photolyase JWB56_02920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JWB56_02925 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_02930 PF07943 Penicillin-binding protein 5, C-terminal domain JWB56_02930 PF00768 D-alanyl-D-alanine carboxypeptidase JWB56_02940 PF03971 Monomeric isocitrate dehydrogenase JWB56_02945 PF00849 RNA pseudouridylate synthase JWB56_02950 PF00180 Isocitrate/isopropylmalate dehydrogenase JWB56_02970 PF06779 Uncharacterised MFS-type transporter YbfB JWB56_02975 PF03466 LysR substrate binding domain JWB56_02975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_02980 PF00375 Sodium:dicarboxylate symporter family JWB56_02985 PF02567 Phenazine biosynthesis-like protein JWB56_03015 PF01867 CRISPR associated protein Cas1 JWB56_03025 PF09611 CRISPR-associated protein (Cas_Csy1) JWB56_03030 PF09614 CRISPR-associated protein (Cas_Csy2) JWB56_03035 PF09615 CRISPR-associated protein (Cas_Csy3) JWB56_03045 PF02581 Thiamine monophosphate synthase JWB56_03050 PF00202 Aminotransferase class-III JWB56_03060 PF00849 RNA pseudouridylate synthase JWB56_03065 PF00271 Helicase conserved C-terminal domain JWB56_03065 PF18337 RapA N-terminal Tudor like domain JWB56_03065 PF18339 RapA N-terminal Tudor like domain 1 JWB56_03065 PF00176 SNF2 family N-terminal domain JWB56_03065 PF12137 RNA polymerase recycling family C-terminal JWB56_03075 PF00440 Bacterial regulatory proteins, tetR family JWB56_03080 PF00175 Oxidoreductase NAD-binding domain JWB56_03080 PF00111 2Fe-2S iron-sulfur cluster binding domain JWB56_03080 PF00970 Oxidoreductase FAD-binding domain JWB56_03085 PF00487 Fatty acid desaturase JWB56_03095 PF17754 MftR C-terminal domain JWB56_03095 PF00440 Bacterial regulatory proteins, tetR family JWB56_03105 PF00202 Aminotransferase class-III JWB56_03110 PF00282 Pyridoxal-dependent decarboxylase conserved domain JWB56_03115 PF00171 Aldehyde dehydrogenase family JWB56_03120 PF01037 Lrp/AsnC ligand binding domain JWB56_03125 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JWB56_03125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JWB56_03125 PF00205 Thiamine pyrophosphate enzyme, central domain JWB56_03130 PF00324 Amino acid permease JWB56_03135 PF12849 PBP superfamily domain JWB56_03140 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_03145 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_03150 PF00005 ABC transporter JWB56_03155 PF08496 Peptidase family S49 N-terminal JWB56_03155 PF01343 Peptidase family S49 JWB56_03170 PF00206 Lyase JWB56_03170 PF08328 Adenylosuccinate lyase C-terminal JWB56_03175 PF04356 Protein of unknown function (DUF489) JWB56_03185 PF00293 NUDIX domain JWB56_03185 PF13344 Haloacid dehalogenase-like hydrolase JWB56_03190 PF00132 Bacterial transferase hexapeptide (six repeats) JWB56_03195 PF07943 Penicillin-binding protein 5, C-terminal domain JWB56_03195 PF00768 D-alanyl-D-alanine carboxypeptidase JWB56_03210 PF01975 Survival protein SurE JWB56_03215 PF01476 LysM domain JWB56_03215 PF01551 Peptidase family M23 JWB56_03220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_03220 PF03466 LysR substrate binding domain JWB56_03225 PF05362 Lon protease (S16) C-terminal proteolytic domain JWB56_03225 PF13654 AAA domain JWB56_03230 PF07690 Major Facilitator Superfamily JWB56_03235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JWB56_03240 PF13593 SBF-like CPA transporter family (DUF4137) JWB56_03245 PF01197 Ribosomal protein L31 JWB56_03250 PF00563 EAL domain JWB56_03250 PF12792 CSS motif domain associated with EAL JWB56_03260 PF04055 Radical SAM superfamily JWB56_03265 PF09285 Elongation factor P, C-terminal JWB56_03265 PF01132 Elongation factor P (EF-P) OB domain JWB56_03265 PF08207 Elongation factor P (EF-P) KOW-like domain JWB56_03270 PF13722 5TM C-terminal transporter carbon starvation CstA JWB56_03270 PF02554 Carbon starvation protein CstA JWB56_03275 PF04328 Selenoprotein, putative JWB56_03285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_03285 PF03466 LysR substrate binding domain JWB56_03290 PF00557 Metallopeptidase family M24 JWB56_03295 PF02028 BCCT, betaine/carnitine/choline family transporter JWB56_03300 PF02028 BCCT, betaine/carnitine/choline family transporter JWB56_03305 PF00355 Rieske [2Fe-2S] domain JWB56_03305 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JWB56_03310 PF00171 Aldehyde dehydrogenase family JWB56_03315 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_03315 PF18113 Rubredoxin binding C-terminal domain JWB56_03320 PF01266 FAD dependent oxidoreductase JWB56_03320 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JWB56_03340 PF00892 EamA-like transporter family JWB56_03350 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system JWB56_03380 PF02678 Pirin JWB56_03380 PF17954 Quercetinase C-terminal cupin domain JWB56_03385 PF00291 Pyridoxal-phosphate dependent enzyme JWB56_03390 PF08348 YheO-like PAS domain JWB56_03390 PF13309 HTH domain JWB56_03400 PF13193 AMP-binding enzyme C-terminal domain JWB56_03400 PF00668 Condensation domain JWB56_03400 PF00501 AMP-binding enzyme JWB56_03400 PF00550 Phosphopantetheine attachment site JWB56_03405 PF00668 Condensation domain JWB56_03405 PF13193 AMP-binding enzyme C-terminal domain JWB56_03405 PF00550 Phosphopantetheine attachment site JWB56_03405 PF00501 AMP-binding enzyme JWB56_03405 PF00975 Thioesterase domain JWB56_03410 PF01032 FecCD transport family JWB56_03415 PF01032 FecCD transport family JWB56_03420 PF00005 ABC transporter JWB56_03425 PF01497 Periplasmic binding protein JWB56_03430 PF07715 TonB-dependent Receptor Plug Domain JWB56_03430 PF00593 TonB dependent receptor JWB56_03435 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JWB56_03440 PF00550 Phosphopantetheine attachment site JWB56_03440 PF00668 Condensation domain JWB56_03440 PF00501 AMP-binding enzyme JWB56_03445 PF00501 AMP-binding enzyme JWB56_03445 PF13193 AMP-binding enzyme C-terminal domain JWB56_03450 PF00857 Isochorismatase family JWB56_03450 PF00550 Phosphopantetheine attachment site JWB56_03455 PF00282 Pyridoxal-dependent decarboxylase conserved domain JWB56_03460 PF00005 ABC transporter JWB56_03460 PF00664 ABC transporter transmembrane region JWB56_03465 PF00005 ABC transporter JWB56_03470 PF00975 Thioesterase domain JWB56_03490 PF01208 Uroporphyrinogen decarboxylase (URO-D) JWB56_03515 PF01227 GTP cyclohydrolase I JWB56_03520 PF00111 2Fe-2S iron-sulfur cluster binding domain JWB56_03520 PF01799 [2Fe-2S] binding domain JWB56_03525 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JWB56_03525 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JWB56_03540 PF00218 Indole-3-glycerol phosphate synthase JWB56_03545 PF02885 Glycosyl transferase family, helical bundle domain JWB56_03545 PF00591 Glycosyl transferase family, a/b domain JWB56_03550 PF07715 TonB-dependent Receptor Plug Domain JWB56_03550 PF00593 TonB dependent receptor JWB56_03555 PF11838 ERAP1-like C-terminal domain JWB56_03555 PF01433 Peptidase family M1 domain JWB56_03560 PF00117 Glutamine amidotransferase class-I JWB56_03570 PF00854 POT family JWB56_03575 PF00120 Glutamine synthetase, catalytic domain JWB56_03575 PF03951 Glutamine synthetase, beta-Grasp domain JWB56_03580 PF04345 Chorismate lyase JWB56_03585 PF01040 UbiA prenyltransferase family JWB56_03620 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JWB56_03620 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JWB56_03625 PF01784 NIF3 (NGG1p interacting factor 3) JWB56_03630 PF13180 PDZ domain JWB56_03635 PF12627 Probable RNA and SrmB- binding site of polymerase A JWB56_03635 PF01743 Poly A polymerase head domain JWB56_03640 PF01515 Phosphate acetyl/butaryl transferase JWB56_03640 PF03949 Malic enzyme, NAD binding domain JWB56_03640 PF00390 Malic enzyme, N-terminal domain JWB56_03650 PF04452 RNA methyltransferase JWB56_03655 PF02219 Methylenetetrahydrofolate reductase JWB56_03660 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JWB56_03660 PF05221 S-adenosyl-L-homocysteine hydrolase JWB56_03675 PF09317 Domain of unknown function (DUF1974) JWB56_03675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_03675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_03680 PF04055 Radical SAM superfamily JWB56_03685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JWB56_03685 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_03695 PF07690 Major Facilitator Superfamily JWB56_03705 PF00557 Metallopeptidase family M24 JWB56_03710 PF00318 Ribosomal protein S2 JWB56_03715 PF00889 Elongation factor TS JWB56_03745 PF03330 Lytic transglycolase JWB56_03745 PF05036 Sporulation related domain JWB56_03750 PF13406 Transglycosylase SLT domain JWB56_03755 PF01098 Cell cycle protein JWB56_03765 PF14489 QueF-like protein JWB56_03765 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JWB56_03770 PF01061 ABC-2 type transporter JWB56_03775 PF00005 ABC transporter JWB56_03780 PF00589 Phage integrase family JWB56_03820 PF06630 Enterobacterial exodeoxyribonuclease VIII JWB56_03820 PF12684 PDDEXK-like domain of unknown function (DUF3799) JWB56_03880 PF03796 DnaB-like helicase C terminal domain JWB56_03880 PF00772 DnaB-like helicase N terminal domain JWB56_04095 PF08525 Opacity-associated protein A N-terminal motif JWB56_04095 PF01551 Peptidase family M23 JWB56_04095 PF01476 LysM domain JWB56_04180 PF00464 Serine hydroxymethyltransferase JWB56_04185 PF02321 Outer membrane efflux protein JWB56_04190 PF00873 AcrB/AcrD/AcrF family JWB56_04195 PF13533 Biotin-lipoyl like JWB56_04200 PF03466 LysR substrate binding domain JWB56_04200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_04205 PF00497 Bacterial extracellular solute-binding proteins, family 3 JWB56_04210 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_04215 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_04225 PF00893 Small Multidrug Resistance protein JWB56_04230 PF00037 4Fe-4S binding domain JWB56_04235 PF01136 Peptidase family U32 JWB56_04235 PF16325 Peptidase family U32 C-terminal domain JWB56_04240 PF00392 Bacterial regulatory proteins, gntR family JWB56_04240 PF00155 Aminotransferase class I and II JWB56_04245 PF02567 Phenazine biosynthesis-like protein JWB56_04250 PF00970 Oxidoreductase FAD-binding domain JWB56_04250 PF00175 Oxidoreductase NAD-binding domain JWB56_04255 PF01980 tRNA-methyltransferase O JWB56_04255 PF18389 TrmO C-terminal domain JWB56_04265 PF00437 Type II/IV secretion system protein JWB56_04265 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JWB56_04275 PF00072 Response regulator receiver domain JWB56_04275 PF00486 Transcriptional regulatory protein, C terminal JWB56_04280 PF00512 His Kinase A (phospho-acceptor) domain JWB56_04280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_04280 PF08521 Two-component sensor kinase N-terminal JWB56_04290 PF00293 NUDIX domain JWB56_04300 PF00912 Transglycosylase JWB56_04300 PF14814 Bifunctional transglycosylase second domain JWB56_04300 PF00905 Penicillin binding protein transpeptidase domain JWB56_04305 PF01513 ATP-NAD kinase JWB56_04310 PF07023 Protein of unknown function (DUF1315) JWB56_04315 PF00591 Glycosyl transferase family, a/b domain JWB56_04315 PF02885 Glycosyl transferase family, helical bundle domain JWB56_04320 PF00375 Sodium:dicarboxylate symporter family JWB56_04325 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_04325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_04325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_04330 PF00756 Putative esterase JWB56_04335 PF00800 Prephenate dehydratase JWB56_04335 PF01817 Chorismate mutase type II JWB56_04335 PF01842 ACT domain JWB56_04340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JWB56_04350 PF07687 Peptidase dimerisation domain JWB56_04350 PF01546 Peptidase family M20/M25/M40 JWB56_04355 PF00753 Metallo-beta-lactamase superfamily JWB56_04365 PF03883 Peroxide stress protein YaaA JWB56_04370 PF05690 Thiazole biosynthesis protein ThiG JWB56_04380 PF04241 Protein of unknown function (DUF423) JWB56_04385 PF00140 Sigma-70 factor, region 1.2 JWB56_04385 PF04545 Sigma-70, region 4 JWB56_04385 PF04542 Sigma-70 region 2 JWB56_04395 PF00313 'Cold-shock' DNA-binding domain JWB56_04400 PF00271 Helicase conserved C-terminal domain JWB56_04400 PF00270 DEAD/DEAH box helicase JWB56_04410 PF00881 Nitroreductase family JWB56_04415 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JWB56_04415 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JWB56_04425 PF00589 Phage integrase family JWB56_04430 PF00872 Transposase, Mutator family JWB56_04505 PF00717 Peptidase S24-like JWB56_04630 PF00583 Acetyltransferase (GNAT) family JWB56_04705 PF01180 Dihydroorotate dehydrogenase JWB56_04710 PF02674 Colicin V production protein JWB56_04715 PF00156 Phosphoribosyl transferase domain JWB56_04730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JWB56_04730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JWB56_04735 PF01435 Peptidase family M48 JWB56_04740 PF09424 Yqey-like protein JWB56_04745 PF01165 Ribosomal protein S21 JWB56_04750 PF00814 Glycoprotease family JWB56_04770 PF00069 Protein kinase domain JWB56_04795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_04795 PF03466 LysR substrate binding domain JWB56_04800 PF00202 Aminotransferase class-III JWB56_04805 PF00171 Aldehyde dehydrogenase family JWB56_04810 PF00324 Amino acid permease JWB56_04840 PF04076 Bacterial OB fold (BOF) protein JWB56_04865 PF00561 alpha/beta hydrolase fold JWB56_04870 PF03616 Sodium/glutamate symporter JWB56_04880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_04880 PF03466 LysR substrate binding domain JWB56_04885 PF00248 Aldo/keto reductase family JWB56_04890 PF00106 short chain dehydrogenase JWB56_04905 PF07729 FCD domain JWB56_04905 PF00392 Bacterial regulatory proteins, gntR family JWB56_04965 PF08946 Osmosensory transporter coiled coil JWB56_04965 PF00083 Sugar (and other) transporter JWB56_04990 PF04403 Paraquat-inducible protein A JWB56_04995 PF02470 MlaD protein JWB56_05005 PF00576 HIUase/Transthyretin family JWB56_05015 PF00072 Response regulator receiver domain JWB56_05015 PF00486 Transcriptional regulatory protein, C terminal JWB56_05020 PF00672 HAMP domain JWB56_05020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_05020 PF00512 His Kinase A (phospho-acceptor) domain JWB56_05060 PF00512 His Kinase A (phospho-acceptor) domain JWB56_05060 PF08521 Two-component sensor kinase N-terminal JWB56_05060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_05065 PF00486 Transcriptional regulatory protein, C terminal JWB56_05065 PF00072 Response regulator receiver domain JWB56_05085 PF01177 Asp/Glu/Hydantoin racemase JWB56_05090 PF00892 EamA-like transporter family JWB56_05095 PF07995 Glucose / Sorbosone dehydrogenase JWB56_05115 PF00375 Sodium:dicarboxylate symporter family JWB56_05125 PF00753 Metallo-beta-lactamase superfamily JWB56_05125 PF16123 Hydroxyacylglutathione hydrolase C-terminus JWB56_05130 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_05135 PF09383 NIL domain JWB56_05135 PF00005 ABC transporter JWB56_05140 PF03180 NLPA lipoprotein JWB56_05145 PF02844 Phosphoribosylglycinamide synthetase, N domain JWB56_05145 PF02843 Phosphoribosylglycinamide synthetase, C domain JWB56_05145 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JWB56_05150 PF01808 AICARFT/IMPCHase bienzyme JWB56_05150 PF02142 MGS-like domain JWB56_05155 PF02954 Bacterial regulatory protein, Fis family JWB56_05175 PF01134 Glucose inhibited division protein A JWB56_05175 PF13932 GidA associated domain JWB56_05185 PF14403 Circularly permuted ATP-grasp type 2 JWB56_05195 PF08379 Bacterial transglutaminase-like N-terminal region JWB56_05195 PF01841 Transglutaminase-like superfamily JWB56_05205 PF01168 Alanine racemase, N-terminal domain JWB56_05205 PF00842 Alanine racemase, C-terminal domain JWB56_05210 PF03796 DnaB-like helicase C terminal domain JWB56_05210 PF00772 DnaB-like helicase N terminal domain JWB56_05215 PF01281 Ribosomal protein L9, N-terminal domain JWB56_05215 PF03948 Ribosomal protein L9, C-terminal domain JWB56_05220 PF01084 Ribosomal protein S18 JWB56_05225 PF01250 Ribosomal protein S6 JWB56_05230 PF01040 UbiA prenyltransferase family JWB56_05235 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JWB56_05240 PF00510 Cytochrome c oxidase subunit III JWB56_05245 PF00115 Cytochrome C and Quinol oxidase polypeptide I JWB56_05250 PF06481 COX Aromatic Rich Motif JWB56_05250 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JWB56_05260 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JWB56_05260 PF02896 PEP-utilising enzyme, TIM barrel domain JWB56_05260 PF00391 PEP-utilising enzyme, mobile domain JWB56_05265 PF03618 Kinase/pyrophosphorylase JWB56_05275 PF01522 Polysaccharide deacetylase JWB56_05275 PF14883 Hypothetical glycosyl hydrolase family 13 JWB56_05280 PF00535 Glycosyl transferase family 2 JWB56_05285 PF13994 PgaD-like protein JWB56_05295 PF00296 Luciferase-like monooxygenase JWB56_05310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_05310 PF03466 LysR substrate binding domain JWB56_05320 PF03462 PCRF domain JWB56_05320 PF00472 RF-1 domain JWB56_05325 PF13847 Methyltransferase domain JWB56_05325 PF17827 PrmC N-terminal domain JWB56_05330 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_05335 PF09084 NMT1/THI5 like JWB56_05340 PF12833 Helix-turn-helix domain JWB56_05345 PF00106 short chain dehydrogenase JWB56_05350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_05350 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_05350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_05355 PF13193 AMP-binding enzyme C-terminal domain JWB56_05355 PF00501 AMP-binding enzyme JWB56_05360 PF01613 Flavin reductase like domain JWB56_05365 PF00899 ThiF family JWB56_05370 PF03109 ABC1 family JWB56_05385 PF03814 Potassium-transporting ATPase A subunit JWB56_05395 PF02669 K+-transporting ATPase, c chain JWB56_05400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_05400 PF00512 His Kinase A (phospho-acceptor) domain JWB56_05400 PF02702 Osmosensitive K+ channel His kinase sensor domain JWB56_05400 PF13493 Domain of unknown function (DUF4118) JWB56_05405 PF00072 Response regulator receiver domain JWB56_05405 PF00486 Transcriptional regulatory protein, C terminal JWB56_05410 PF00120 Glutamine synthetase, catalytic domain JWB56_05420 PF03232 Ubiquinone biosynthesis protein COQ7 JWB56_05425 PF07690 Major Facilitator Superfamily JWB56_05430 PF07244 Surface antigen variable number repeat JWB56_05430 PF17243 POTRA domain TamA domain 1 JWB56_05430 PF01103 Surface antigen JWB56_05445 PF06434 Aconitate hydratase 2 N-terminus JWB56_05445 PF11791 Aconitate B N-terminal domain JWB56_05445 PF00330 Aconitase family (aconitate hydratase) JWB56_05455 PF00027 Cyclic nucleotide-binding domain JWB56_05455 PF00520 Ion transport protein JWB56_05460 PF07690 Major Facilitator Superfamily JWB56_05475 PF03466 LysR substrate binding domain JWB56_05475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_05480 PF04284 Protein of unknown function (DUF441) JWB56_05490 PF01479 S4 domain JWB56_05490 PF00849 RNA pseudouridylate synthase JWB56_05505 PF00849 RNA pseudouridylate synthase JWB56_05505 PF01479 S4 domain JWB56_05510 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JWB56_05515 PF01119 DNA mismatch repair protein, C-terminal domain JWB56_05515 PF08676 MutL C terminal dimerisation domain JWB56_05525 PF17209 Hfq protein JWB56_05535 PF00881 Nitroreductase family JWB56_05545 PF00149 Calcineurin-like phosphoesterase JWB56_05550 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JWB56_05555 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JWB56_05555 PF00749 tRNA synthetases class I (E and Q), catalytic domain JWB56_05560 PF02540 NAD synthase JWB56_05560 PF00117 Glutamine amidotransferase class-I JWB56_05560 PF00958 GMP synthase C terminal domain JWB56_05565 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JWB56_05570 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JWB56_05575 PF13520 Amino acid permease JWB56_05580 PF00171 Aldehyde dehydrogenase family JWB56_05595 PF00465 Iron-containing alcohol dehydrogenase JWB56_05600 PF05970 PIF1-like helicase JWB56_05600 PF14493 Helix-turn-helix domain JWB56_05610 PF02110 Hydroxyethylthiazole kinase family JWB56_05625 PF01433 Peptidase family M1 domain JWB56_05625 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JWB56_05625 PF11940 Domain of unknown function (DUF3458) Ig-like fold JWB56_05640 PF00577 Outer membrane usher protein JWB56_05640 PF13953 PapC C-terminal domain JWB56_05640 PF13954 PapC N-terminal domain JWB56_05665 PF01817 Chorismate mutase type II JWB56_05670 PF01037 Lrp/AsnC ligand binding domain JWB56_05685 PF00440 Bacterial regulatory proteins, tetR family JWB56_05690 PF00593 TonB dependent receptor JWB56_05690 PF07715 TonB-dependent Receptor Plug Domain JWB56_05725 PF00593 TonB dependent receptor JWB56_05725 PF07715 TonB-dependent Receptor Plug Domain JWB56_05745 PF00005 ABC transporter JWB56_05745 PF12848 ABC transporter JWB56_05750 PF00582 Universal stress protein family JWB56_05765 PF00689 Cation transporting ATPase, C-terminus JWB56_05765 PF00690 Cation transporter/ATPase, N-terminus JWB56_05770 PF02308 MgtC family JWB56_05775 PF03594 Benzoate membrane transport protein JWB56_05780 PF01037 Lrp/AsnC ligand binding domain JWB56_05785 PF01810 LysE type translocator JWB56_05790 PF00923 Transaldolase/Fructose-6-phosphate aldolase JWB56_05795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_05795 PF03466 LysR substrate binding domain JWB56_05805 PF02803 Thiolase, C-terminal domain JWB56_05805 PF00108 Thiolase, N-terminal domain JWB56_05815 PF01575 MaoC like domain JWB56_05820 PF00144 Beta-lactamase JWB56_05830 PF07690 Major Facilitator Superfamily JWB56_05835 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JWB56_05835 PF12170 DNA polymerase III tau subunit V interacting with alpha JWB56_05835 PF12169 DNA polymerase III subunits gamma and tau domain III JWB56_05840 PF05506 Domain of unknown function (DUF756) JWB56_05840 PF04185 Phosphoesterase family JWB56_05845 PF03061 Thioesterase superfamily JWB56_05850 PF00465 Iron-containing alcohol dehydrogenase JWB56_05860 PF01451 Low molecular weight phosphotyrosine protein phosphatase JWB56_05865 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JWB56_05865 PF01565 FAD binding domain JWB56_05880 PF01645 Conserved region in glutamate synthase JWB56_05900 PF12832 MFS_1 like family JWB56_05910 PF02785 Biotin carboxylase C-terminal domain JWB56_05910 PF00289 Biotin carboxylase, N-terminal domain JWB56_05910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JWB56_05915 PF00364 Biotin-requiring enzyme JWB56_05920 PF01220 Dehydroquinase class II JWB56_05925 PF00817 impB/mucB/samB family JWB56_05925 PF11799 impB/mucB/samB family C-terminal domain JWB56_05925 PF13438 Domain of unknown function (DUF4113) JWB56_05935 PF00005 ABC transporter JWB56_05940 PF00486 Transcriptional regulatory protein, C terminal JWB56_05940 PF00072 Response regulator receiver domain JWB56_05950 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JWB56_05950 PF13806 Rieske-like [2Fe-2S] domain JWB56_05950 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_05950 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JWB56_05950 PF04324 BFD-like [2Fe-2S] binding domain JWB56_05950 PF18267 Rubredoxin NAD+ reductase C-terminal domain JWB56_05955 PF04324 BFD-like [2Fe-2S] binding domain JWB56_05955 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JWB56_05955 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JWB56_05955 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_05955 PF18267 Rubredoxin NAD+ reductase C-terminal domain JWB56_05960 PF04324 BFD-like [2Fe-2S] binding domain JWB56_05960 PF00384 Molybdopterin oxidoreductase JWB56_05960 PF01568 Molydopterin dinucleotide binding domain JWB56_05960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JWB56_05965 PF12804 MobA-like NTP transferase domain JWB56_05970 PF00384 Molybdopterin oxidoreductase JWB56_05970 PF01568 Molydopterin dinucleotide binding domain JWB56_05970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JWB56_05975 PF06463 Molybdenum Cofactor Synthesis C JWB56_05975 PF04055 Radical SAM superfamily JWB56_05985 PF02391 MoaE protein JWB56_05990 PF00994 Probable molybdopterin binding domain JWB56_05990 PF01967 MoaC family JWB56_05995 PF00994 Probable molybdopterin binding domain JWB56_05995 PF03454 MoeA C-terminal region (domain IV) JWB56_05995 PF03453 MoeA N-terminal region (domain I and II) JWB56_06000 PF01638 HxlR-like helix-turn-helix JWB56_06005 PF00155 Aminotransferase class I and II JWB56_06005 PF00392 Bacterial regulatory proteins, gntR family JWB56_06010 PF00892 EamA-like transporter family JWB56_06030 PF02635 DsrE/DsrF-like family JWB56_06035 PF16363 GDP-mannose 4,6 dehydratase JWB56_06040 PF10415 Fumarase C C-terminus JWB56_06040 PF00206 Lyase JWB56_06060 PF01266 FAD dependent oxidoreductase JWB56_06070 PF02542 YgbB family JWB56_06080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JWB56_06080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JWB56_06085 PF00440 Bacterial regulatory proteins, tetR family JWB56_06090 PF00072 Response regulator receiver domain JWB56_06090 PF02954 Bacterial regulatory protein, Fis family JWB56_06090 PF00158 Sigma-54 interaction domain JWB56_06095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_06095 PF00512 His Kinase A (phospho-acceptor) domain JWB56_06095 PF00989 PAS fold JWB56_06105 PF04055 Radical SAM superfamily JWB56_06105 PF18693 TRAM domain JWB56_06105 PF00919 Uncharacterized protein family UPF0004 JWB56_06110 PF00696 Amino acid kinase family JWB56_06115 PF01765 Ribosome recycling factor JWB56_06120 PF01255 Putative undecaprenyl diphosphate synthase JWB56_06130 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JWB56_06130 PF13288 DXP reductoisomerase C-terminal domain JWB56_06130 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JWB56_06135 PF13180 PDZ domain JWB56_06135 PF02163 Peptidase family M50 JWB56_06135 PF17820 PDZ domain JWB56_06140 PF01103 Surface antigen JWB56_06140 PF07244 Surface antigen variable number repeat JWB56_06150 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JWB56_06150 PF00132 Bacterial transferase hexapeptide (six repeats) JWB56_06155 PF07977 FabA-like domain JWB56_06160 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JWB56_06160 PF00132 Bacterial transferase hexapeptide (six repeats) JWB56_06175 PF02631 RecX family JWB56_06180 PF00154 recA bacterial DNA recombination protein JWB56_06185 PF01479 S4 domain JWB56_06190 PF13419 Haloacid dehalogenase-like hydrolase JWB56_06220 PF00266 Aminotransferase class-V JWB56_06225 PF00324 Amino acid permease JWB56_06235 PF00082 Subtilase family JWB56_06235 PF05922 Peptidase inhibitor I9 JWB56_06240 PF00916 Sulfate permease family JWB56_06240 PF01740 STAS domain JWB56_06245 PF02586 SOS response associated peptidase (SRAP) JWB56_06250 PF07995 Glucose / Sorbosone dehydrogenase JWB56_06260 PF00563 EAL domain JWB56_06260 PF03707 Bacterial signalling protein N terminal repeat JWB56_06260 PF00990 Diguanylate cyclase, GGDEF domain JWB56_06265 PF13737 Transposase DDE domain JWB56_06285 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JWB56_06285 PF02378 Phosphotransferase system, EIIC JWB56_06290 PF00294 pfkB family carbohydrate kinase JWB56_06295 PF05524 PEP-utilising enzyme, N-terminal JWB56_06295 PF00391 PEP-utilising enzyme, mobile domain JWB56_06295 PF02896 PEP-utilising enzyme, TIM barrel domain JWB56_06295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JWB56_06295 PF00381 PTS HPr component phosphorylation site JWB56_06320 PF05525 Branched-chain amino acid transport protein JWB56_06325 PF00557 Metallopeptidase family M24 JWB56_06330 PF03466 LysR substrate binding domain JWB56_06330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_06340 PF00462 Glutaredoxin JWB56_06345 PF00202 Aminotransferase class-III JWB56_06350 PF00478 IMP dehydrogenase / GMP reductase domain JWB56_06350 PF00571 CBS domain JWB56_06375 PF02881 SRP54-type protein, helical bundle domain JWB56_06375 PF00448 SRP54-type protein, GTPase domain JWB56_06385 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JWB56_06395 PF08173 Membrane bound YbgT-like protein JWB56_06400 PF02322 Cytochrome bd terminal oxidase subunit II JWB56_06405 PF01654 Cytochrome bd terminal oxidase subunit I JWB56_06415 PF07290 Protein of unknown function (DUF1449) JWB56_06425 PF00294 pfkB family carbohydrate kinase JWB56_06430 PF07715 TonB-dependent Receptor Plug Domain JWB56_06430 PF00593 TonB dependent receptor JWB56_06435 PF05193 Peptidase M16 inactive domain JWB56_06435 PF00675 Insulinase (Peptidase family M16) JWB56_06435 PF08367 Peptidase M16C associated JWB56_06440 PF02253 Phospholipase A1 JWB56_06445 PF02386 Cation transport protein JWB56_06450 PF02254 TrkA-N domain JWB56_06450 PF02080 TrkA-C domain JWB56_06455 PF00585 C-terminal regulatory domain of Threonine dehydratase JWB56_06455 PF00291 Pyridoxal-phosphate dependent enzyme JWB56_06460 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JWB56_06475 PF02774 Semialdehyde dehydrogenase, dimerisation domain JWB56_06475 PF01118 Semialdehyde dehydrogenase, NAD binding domain JWB56_06485 PF02617 ATP-dependent Clp protease adaptor protein ClpS JWB56_06490 PF17871 AAA lid domain JWB56_06490 PF00004 ATPase family associated with various cellular activities (AAA) JWB56_06490 PF07724 AAA domain (Cdc48 subfamily) JWB56_06490 PF10431 C-terminal, D2-small domain, of ClpB protein JWB56_06490 PF02861 Clp amino terminal domain, pathogenicity island component JWB56_06495 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JWB56_06500 PF00793 DAHP synthetase I family JWB56_06515 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JWB56_06515 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_06545 PF00117 Glutamine amidotransferase class-I JWB56_06545 PF06418 CTP synthase N-terminus JWB56_06550 PF00793 DAHP synthetase I family JWB56_06555 PF00113 Enolase, C-terminal TIM barrel domain JWB56_06555 PF03952 Enolase, N-terminal domain JWB56_06560 PF04239 Protein of unknown function (DUF421) JWB56_06565 PF04977 Septum formation initiator JWB56_06570 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JWB56_06575 PF01144 Coenzyme A transferase JWB56_06580 PF01144 Coenzyme A transferase JWB56_06585 PF02803 Thiolase, C-terminal domain JWB56_06585 PF00108 Thiolase, N-terminal domain JWB56_06590 PF00206 Lyase JWB56_06590 PF10397 Adenylosuccinate lyase C-terminus JWB56_06595 PF00561 alpha/beta hydrolase fold JWB56_06600 PF07690 Major Facilitator Superfamily JWB56_06605 PF02627 Carboxymuconolactone decarboxylase family JWB56_06610 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JWB56_06610 PF00775 Dioxygenase JWB56_06615 PF00775 Dioxygenase JWB56_06620 PF01487 Type I 3-dehydroquinase JWB56_06625 PF05048 Periplasmic copper-binding protein (NosD) JWB56_06630 PF04966 Carbohydrate-selective porin, OprB family JWB56_06635 PF13360 PQQ-like domain JWB56_06635 PF01011 PQQ enzyme repeat JWB56_06645 PF04143 Sulphur transport JWB56_06655 PF00753 Metallo-beta-lactamase superfamily JWB56_06660 PF01614 Bacterial transcriptional regulator JWB56_06660 PF09339 IclR helix-turn-helix domain JWB56_06665 PF03466 LysR substrate binding domain JWB56_06665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_06670 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_06670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_06670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_06685 PF00106 short chain dehydrogenase JWB56_06695 PF07690 Major Facilitator Superfamily JWB56_06705 PF01425 Amidase JWB56_06710 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JWB56_06725 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JWB56_06725 PF00355 Rieske [2Fe-2S] domain JWB56_06740 PF00175 Oxidoreductase NAD-binding domain JWB56_06740 PF00111 2Fe-2S iron-sulfur cluster binding domain JWB56_06745 PF01613 Flavin reductase like domain JWB56_06755 PF02727 Copper amine oxidase, N2 domain JWB56_06755 PF02728 Copper amine oxidase, N3 domain JWB56_06755 PF07833 Copper amine oxidase N-terminal domain JWB56_06755 PF01179 Copper amine oxidase, enzyme domain JWB56_06765 PF00171 Aldehyde dehydrogenase family JWB56_06770 PF01804 Penicillin amidase JWB56_06775 PF12146 Serine aminopeptidase, S33 JWB56_06780 PF02803 Thiolase, C-terminal domain JWB56_06780 PF00108 Thiolase, N-terminal domain JWB56_06785 PF01144 Coenzyme A transferase JWB56_06790 PF01144 Coenzyme A transferase JWB56_06795 PF04444 Catechol dioxygenase N terminus JWB56_06795 PF00775 Dioxygenase JWB56_06800 PF02426 Muconolactone delta-isomerase JWB56_06805 PF13378 Enolase C-terminal domain-like JWB56_06805 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JWB56_06810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_06810 PF03466 LysR substrate binding domain JWB56_06820 PF00392 Bacterial regulatory proteins, gntR family JWB56_06820 PF07729 FCD domain JWB56_06825 PF00920 Dehydratase family JWB56_06840 PF00171 Aldehyde dehydrogenase family JWB56_06850 PF00561 alpha/beta hydrolase fold JWB56_06855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JWB56_06855 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_06860 PF00106 short chain dehydrogenase JWB56_06870 PF09278 MerR, DNA binding JWB56_06870 PF00376 MerR family regulatory protein JWB56_06880 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_06890 PF12706 Beta-lactamase superfamily domain JWB56_06895 PF08359 YsiA-like protein, C-terminal region JWB56_06895 PF00440 Bacterial regulatory proteins, tetR family JWB56_06900 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JWB56_06900 PF12833 Helix-turn-helix domain JWB56_06905 PF00106 short chain dehydrogenase JWB56_06910 PF06314 Acetoacetate decarboxylase (ADC) JWB56_06920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JWB56_06925 PF07995 Glucose / Sorbosone dehydrogenase JWB56_06935 PF00857 Isochorismatase family JWB56_06940 PF03466 LysR substrate binding domain JWB56_06940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_06945 PF07995 Glucose / Sorbosone dehydrogenase JWB56_06950 PF00999 Sodium/hydrogen exchanger family JWB56_06950 PF02254 TrkA-N domain JWB56_06965 PF07687 Peptidase dimerisation domain JWB56_06965 PF01546 Peptidase family M20/M25/M40 JWB56_07005 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) JWB56_07010 PF07690 Major Facilitator Superfamily JWB56_07015 PF04909 Amidohydrolase JWB56_07025 PF00392 Bacterial regulatory proteins, gntR family JWB56_07025 PF07702 UTRA domain JWB56_07030 PF08450 SMP-30/Gluconolactonase/LRE-like region JWB56_07040 PF03466 LysR substrate binding domain JWB56_07040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_07055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JWB56_07055 PF00529 HlyD membrane-fusion protein of T1SS JWB56_07070 PF00171 Aldehyde dehydrogenase family JWB56_07075 PF00920 Dehydratase family JWB56_07085 PF03466 LysR substrate binding domain JWB56_07085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_07090 PF01370 NAD dependent epimerase/dehydratase family JWB56_07095 PF07690 Major Facilitator Superfamily JWB56_07100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JWB56_07100 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JWB56_07115 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JWB56_07115 PF14572 Phosphoribosyl synthetase-associated domain JWB56_07120 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JWB56_07135 PF00196 Bacterial regulatory proteins, luxR family JWB56_07135 PF03472 Autoinducer binding domain JWB56_07140 PF01425 Amidase JWB56_07145 PF13533 Biotin-lipoyl like JWB56_07150 PF07690 Major Facilitator Superfamily JWB56_07175 PF01975 Survival protein SurE JWB56_07185 PF13291 ACT domain JWB56_07185 PF04607 Region found in RelA / SpoT proteins JWB56_07185 PF02824 TGS domain JWB56_07190 PF00271 Helicase conserved C-terminal domain JWB56_07190 PF04851 Type III restriction enzyme, res subunit JWB56_07190 PF02151 UvrB/uvrC motif JWB56_07190 PF17757 UvrB interaction domain JWB56_07190 PF12344 Ultra-violet resistance protein B JWB56_07220 PF13673 Acetyltransferase (GNAT) domain JWB56_07225 PF12146 Serine aminopeptidase, S33 JWB56_07230 PF03466 LysR substrate binding domain JWB56_07230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_07245 PF12146 Serine aminopeptidase, S33 JWB56_07250 PF12833 Helix-turn-helix domain JWB56_07250 PF02311 AraC-like ligand binding domain JWB56_07260 PF00672 HAMP domain JWB56_07260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_07260 PF00512 His Kinase A (phospho-acceptor) domain JWB56_07260 PF16527 Two-component sensor protein CpxA, periplasmic domain JWB56_07265 PF00486 Transcriptional regulatory protein, C terminal JWB56_07265 PF00072 Response regulator receiver domain JWB56_07270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JWB56_07270 PF00529 HlyD membrane-fusion protein of T1SS JWB56_07275 PF00873 AcrB/AcrD/AcrF family JWB56_07280 PF02321 Outer membrane efflux protein JWB56_07285 PF12146 Serine aminopeptidase, S33 JWB56_07290 PF00743 Flavin-binding monooxygenase-like JWB56_07300 PF01266 FAD dependent oxidoreductase JWB56_07850 PF16970 Type-1 fimbrial protein, A JWB56_07855 PF02753 Pili assembly chaperone PapD, C-terminal domain JWB56_07855 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JWB56_07860 PF13954 PapC N-terminal domain JWB56_07860 PF00577 Outer membrane usher protein JWB56_07860 PF13953 PapC C-terminal domain JWB56_07875 PF00107 Zinc-binding dehydrogenase JWB56_07875 PF08240 Alcohol dehydrogenase GroES-like domain JWB56_07885 PF00199 Catalase JWB56_07900 PF13091 PLD-like domain JWB56_07915 PF01244 Membrane dipeptidase (Peptidase family M19) JWB56_07920 PF04055 Radical SAM superfamily JWB56_07920 PF13186 Iron-sulfur cluster-binding domain JWB56_07925 PF05402 Coenzyme PQQ synthesis protein D (PqqD) JWB56_07930 PF03070 TENA/THI-4/PQQC family JWB56_07935 PF12706 Beta-lactamase superfamily domain JWB56_07940 PF08042 PqqA family JWB56_07945 PF02503 Polyphosphate kinase middle domain JWB56_07945 PF13089 Polyphosphate kinase N-terminal domain JWB56_07945 PF17941 Polyphosphate kinase C-terminal domain 1 JWB56_07945 PF13090 Polyphosphate kinase C-terminal domain 2 JWB56_07950 PF00149 Calcineurin-like phosphoesterase JWB56_07960 PF00857 Isochorismatase family JWB56_07960 PF00550 Phosphopantetheine attachment site JWB56_07965 PF00106 short chain dehydrogenase JWB56_07970 PF03459 TOBE domain JWB56_07970 PF00005 ABC transporter JWB56_07975 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_07985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_07985 PF03459 TOBE domain JWB56_07990 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JWB56_07990 PF00355 Rieske [2Fe-2S] domain JWB56_07995 PF00866 Ring hydroxylating beta subunit JWB56_08000 PF00175 Oxidoreductase NAD-binding domain JWB56_08000 PF00111 2Fe-2S iron-sulfur cluster binding domain JWB56_08000 PF00970 Oxidoreductase FAD-binding domain JWB56_08005 PF12833 Helix-turn-helix domain JWB56_08005 PF14525 AraC-binding-like domain JWB56_08015 PF01613 Flavin reductase like domain JWB56_08030 PF01738 Dienelactone hydrolase family JWB56_08035 PF07690 Major Facilitator Superfamily JWB56_08060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_08060 PF03466 LysR substrate binding domain JWB56_08065 PF01144 Coenzyme A transferase JWB56_08070 PF01144 Coenzyme A transferase JWB56_08075 PF02667 Short chain fatty acid transporter JWB56_08080 PF02803 Thiolase, C-terminal domain JWB56_08080 PF00108 Thiolase, N-terminal domain JWB56_08085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_08085 PF03466 LysR substrate binding domain JWB56_08090 PF03466 LysR substrate binding domain JWB56_08090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_08105 PF10415 Fumarase C C-terminus JWB56_08105 PF00206 Lyase JWB56_08110 PF00593 TonB dependent receptor JWB56_08110 PF07715 TonB-dependent Receptor Plug Domain JWB56_08115 PF00083 Sugar (and other) transporter JWB56_08130 PF00005 ABC transporter JWB56_08135 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_08140 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JWB56_08155 PF00392 Bacterial regulatory proteins, gntR family JWB56_08155 PF07702 UTRA domain JWB56_08165 PF02525 Flavodoxin-like fold JWB56_08170 PF01638 HxlR-like helix-turn-helix JWB56_08175 PF12833 Helix-turn-helix domain JWB56_08175 PF06445 GyrI-like small molecule binding domain JWB56_08190 PF01925 Sulfite exporter TauE/SafE JWB56_08195 PF00753 Metallo-beta-lactamase superfamily JWB56_08195 PF04273 Putative phosphatase (DUF442) JWB56_08200 PF04273 Putative phosphatase (DUF442) JWB56_08200 PF00753 Metallo-beta-lactamase superfamily JWB56_08205 PF00158 Sigma-54 interaction domain JWB56_08205 PF02954 Bacterial regulatory protein, Fis family JWB56_08205 PF00072 Response regulator receiver domain JWB56_08210 PF01062 Bestrophin, RFP-TM, chloride channel JWB56_08215 PF08240 Alcohol dehydrogenase GroES-like domain JWB56_08215 PF00107 Zinc-binding dehydrogenase JWB56_08220 PF00106 short chain dehydrogenase JWB56_08225 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_08225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JWB56_08230 PF02817 e3 binding domain JWB56_08230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JWB56_08230 PF00364 Biotin-requiring enzyme JWB56_08235 PF02779 Transketolase, pyrimidine binding domain JWB56_08235 PF02780 Transketolase, C-terminal domain JWB56_08240 PF00676 Dehydrogenase E1 component JWB56_08245 PF04055 Radical SAM superfamily JWB56_08260 PF00990 Diguanylate cyclase, GGDEF domain JWB56_08260 PF08448 PAS fold JWB56_08265 PF01264 Chorismate synthase JWB56_08270 PF05175 Methyltransferase small domain JWB56_08275 PF00291 Pyridoxal-phosphate dependent enzyme JWB56_08285 PF01434 Peptidase family M41 JWB56_08285 PF17862 AAA+ lid domain JWB56_08285 PF00004 ATPase family associated with various cellular activities (AAA) JWB56_08295 PF05166 YcgL domain JWB56_08315 PF00570 HRDC domain JWB56_08315 PF01612 3'-5' exonuclease JWB56_08320 PF13662 Toprim domain JWB56_08320 PF02132 RecR protein JWB56_08325 PF02575 YbaB/EbfC DNA-binding family JWB56_08335 PF01053 Cys/Met metabolism PLP-dependent enzyme JWB56_08340 PF00561 alpha/beta hydrolase fold JWB56_08345 PF08241 Methyltransferase domain JWB56_08375 PF01230 HIT domain JWB56_08400 PF02684 Lipid-A-disaccharide synthetase JWB56_08405 PF07715 TonB-dependent Receptor Plug Domain JWB56_08405 PF00593 TonB dependent receptor JWB56_08425 PF01925 Sulfite exporter TauE/SafE JWB56_08430 PF00793 DAHP synthetase I family JWB56_08435 PF02654 Cobalamin-5-phosphate synthase JWB56_08445 PF00300 Histidine phosphatase superfamily (branch 1) JWB56_08450 PF02277 Phosphoribosyltransferase JWB56_08455 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JWB56_08465 PF13419 Haloacid dehalogenase-like hydrolase JWB56_08490 PF07715 TonB-dependent Receptor Plug Domain JWB56_08490 PF00593 TonB dependent receptor JWB56_08495 PF03737 Aldolase/RraA JWB56_08505 PF04183 IucA / IucC family JWB56_08505 PF06276 Ferric iron reductase FhuF-like transporter JWB56_08510 PF06276 Ferric iron reductase FhuF-like transporter JWB56_08510 PF04183 IucA / IucC family JWB56_08515 PF07690 Major Facilitator Superfamily JWB56_08520 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JWB56_08525 PF04183 IucA / IucC family JWB56_08525 PF06276 Ferric iron reductase FhuF-like transporter JWB56_08530 PF04073 Aminoacyl-tRNA editing domain JWB56_08540 PF03109 ABC1 family JWB56_08545 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_08545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_08545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_08550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_08550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_08550 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_08555 PF00487 Fatty acid desaturase JWB56_08565 PF09312 SurA N-terminal domain JWB56_08565 PF00639 PPIC-type PPIASE domain JWB56_08570 PF00216 Bacterial DNA-binding protein JWB56_08585 PF02082 Transcriptional regulator JWB56_08590 PF00266 Aminotransferase class-V JWB56_08595 PF01592 NifU-like N terminal domain JWB56_08600 PF01521 Iron-sulphur cluster biosynthesis JWB56_08605 PF00226 DnaJ domain JWB56_08605 PF07743 HSCB C-terminal oligomerisation domain JWB56_08610 PF00012 Hsp70 protein JWB56_08615 PF00111 2Fe-2S iron-sulfur cluster binding domain JWB56_08620 PF00211 Adenylate and Guanylate cyclase catalytic domain JWB56_08630 PF17757 UvrB interaction domain JWB56_08630 PF03461 TRCF domain JWB56_08630 PF02559 CarD-like/TRCF domain JWB56_08630 PF00271 Helicase conserved C-terminal domain JWB56_08630 PF00270 DEAD/DEAH box helicase JWB56_08650 PF03737 Aldolase/RraA JWB56_08660 PF01649 Ribosomal protein S20 JWB56_08670 PF00459 Inositol monophosphatase family JWB56_08685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JWB56_08685 PF00005 ABC transporter JWB56_08690 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_08695 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_08700 PF01432 Peptidase family M3 JWB56_08715 PF00593 TonB dependent receptor JWB56_08715 PF07715 TonB-dependent Receptor Plug Domain JWB56_08720 PF03544 Gram-negative bacterial TonB protein C-terminal JWB56_08725 PF01618 MotA/TolQ/ExbB proton channel family JWB56_08730 PF02472 Biopolymer transport protein ExbD/TolR JWB56_08735 PF02472 Biopolymer transport protein ExbD/TolR JWB56_08745 PF01274 Malate synthase JWB56_08750 PF03969 AFG1-like ATPase JWB56_08760 PF00743 Flavin-binding monooxygenase-like JWB56_08770 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JWB56_08780 PF00216 Bacterial DNA-binding protein JWB56_08785 PF00575 S1 RNA binding domain JWB56_08790 PF02224 Cytidylate kinase JWB56_08800 PF14437 MafB19-like deaminase JWB56_08810 PF03167 Uracil DNA glycosylase superfamily JWB56_08820 PF03934 Type II secretion system (T2SS), protein K JWB56_08825 PF11612 Type II secretion system (T2SS), protein J JWB56_08825 PF07963 Prokaryotic N-terminal methylation motif JWB56_08830 PF02501 Type II secretion system (T2SS), protein I JWB56_08830 PF07963 Prokaryotic N-terminal methylation motif JWB56_08845 PF01026 TatD related DNase JWB56_08855 PF09115 DNA polymerase III, delta subunit, C terminal JWB56_08860 PF02348 Cytidylyltransferase JWB56_08865 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JWB56_08870 PF00664 ABC transporter transmembrane region JWB56_08870 PF00005 ABC transporter JWB56_08880 PF01618 MotA/TolQ/ExbB proton channel family JWB56_08885 PF02195 ParB-like nuclease domain JWB56_08885 PF17762 HTH domain found in ParB protein JWB56_08890 PF13614 AAA domain JWB56_08895 PF02527 rRNA small subunit methyltransferase G JWB56_08900 PF00483 Nucleotidyl transferase JWB56_08905 PF01636 Phosphotransferase enzyme family JWB56_08910 PF03968 OstA-like protein JWB56_08910 PF04453 LPS transport system D JWB56_08915 PF00639 PPIC-type PPIASE domain JWB56_08915 PF09312 SurA N-terminal domain JWB56_08920 PF01116 Fructose-bisphosphate aldolase class-II JWB56_08930 PF00162 Phosphoglycerate kinase JWB56_08940 PF02545 Maf-like protein JWB56_08945 PF08007 Cupin superfamily protein JWB56_08960 PF00375 Sodium:dicarboxylate symporter family JWB56_08965 PF06912 Protein of unknown function (DUF1275) JWB56_08970 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) JWB56_08975 PF00005 ABC transporter JWB56_08975 PF00664 ABC transporter transmembrane region JWB56_08985 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JWB56_08985 PF12833 Helix-turn-helix domain JWB56_08990 PF01597 Glycine cleavage H-protein JWB56_08995 PF02146 Sir2 family JWB56_09000 PF00474 Sodium:solute symporter family JWB56_09005 PF01037 Lrp/AsnC ligand binding domain JWB56_09010 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JWB56_09010 PF00171 Aldehyde dehydrogenase family JWB56_09010 PF01619 Proline dehydrogenase JWB56_09010 PF14850 DNA-binding domain of Proline dehydrogenase JWB56_09020 PF05958 tRNA (Uracil-5-)-methyltransferase JWB56_09040 PF04264 YceI-like domain JWB56_09050 PF02780 Transketolase, C-terminal domain JWB56_09050 PF00456 Transketolase, thiamine diphosphate binding domain JWB56_09050 PF02779 Transketolase, pyrimidine binding domain JWB56_09055 PF02772 S-adenosylmethionine synthetase, central domain JWB56_09055 PF02773 S-adenosylmethionine synthetase, C-terminal domain JWB56_09055 PF00438 S-adenosylmethionine synthetase, N-terminal domain JWB56_09075 PF00905 Penicillin binding protein transpeptidase domain JWB56_09090 PF02075 Crossover junction endodeoxyribonuclease RuvC JWB56_09095 PF01256 Carbohydrate kinase JWB56_09095 PF03853 YjeF-related protein N-terminus JWB56_09100 PF08331 Domain of unknown function (DUF1730) JWB56_09105 PF06968 Biotin and Thiamin Synthesis associated domain JWB56_09105 PF04055 Radical SAM superfamily JWB56_09120 PF16970 Type-1 fimbrial protein, A JWB56_09130 PF13953 PapC C-terminal domain JWB56_09130 PF13954 PapC N-terminal domain JWB56_09130 PF00577 Outer membrane usher protein JWB56_09160 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JWB56_09170 PF03466 LysR substrate binding domain JWB56_09170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_09200 PF01709 Transcriptional regulator JWB56_09205 PF01037 Lrp/AsnC ligand binding domain JWB56_09215 PF00005 ABC transporter JWB56_09220 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_09225 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_09240 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JWB56_09240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_09250 PF00296 Luciferase-like monooxygenase JWB56_09255 PF03180 NLPA lipoprotein JWB56_09260 PF03180 NLPA lipoprotein JWB56_09265 PF09383 NIL domain JWB56_09265 PF00005 ABC transporter JWB56_09270 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_09275 PF01926 50S ribosome-binding GTPase JWB56_09275 PF06071 Protein of unknown function (DUF933) JWB56_09300 PF03591 AzlC protein JWB56_09305 PF05437 Branched-chain amino acid transport protein (AzlD) JWB56_09315 PF02222 ATP-grasp domain JWB56_09320 PF01909 Nucleotidyltransferase domain JWB56_09320 PF08335 GlnD PII-uridylyltransferase JWB56_09320 PF01966 HD domain JWB56_09325 PF00155 Aminotransferase class I and II JWB56_09335 PF12833 Helix-turn-helix domain JWB56_09335 PF12852 Cupin JWB56_09340 PF00255 Glutathione peroxidase JWB56_09345 PF01641 SelR domain JWB56_09350 PF00155 Aminotransferase class I and II JWB56_09355 PF00375 Sodium:dicarboxylate symporter family JWB56_09360 PF17763 Glutaminase/Asparaginase C-terminal domain JWB56_09360 PF00710 Asparaginase, N-terminal JWB56_09365 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JWB56_09365 PF01336 OB-fold nucleic acid binding domain JWB56_09365 PF02811 PHP domain JWB56_09365 PF14579 Helix-hairpin-helix motif JWB56_09365 PF07733 Bacterial DNA polymerase III alpha NTPase domain JWB56_09370 PF00588 SpoU rRNA Methylase family JWB56_09375 PF00132 Bacterial transferase hexapeptide (six repeats) JWB56_09390 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_09390 PF13192 Thioredoxin domain JWB56_09405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_09405 PF03466 LysR substrate binding domain JWB56_09410 PF01758 Sodium Bile acid symporter family JWB56_09415 PF01022 Bacterial regulatory protein, arsR family JWB56_09420 PF03960 ArsC family JWB56_09430 PF13382 Adenine deaminase C-terminal domain JWB56_09430 PF01979 Amidohydrolase family JWB56_09440 PF03466 LysR substrate binding domain JWB56_09440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_09450 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JWB56_09455 PF01177 Asp/Glu/Hydantoin racemase JWB56_09460 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JWB56_09465 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_09470 PF00005 ABC transporter JWB56_09475 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JWB56_09485 PF00083 Sugar (and other) transporter JWB56_09490 PF00296 Luciferase-like monooxygenase JWB56_09505 PF01654 Cytochrome bd terminal oxidase subunit I JWB56_09510 PF02322 Cytochrome bd terminal oxidase subunit II JWB56_09520 PF00392 Bacterial regulatory proteins, gntR family JWB56_09520 PF00155 Aminotransferase class I and II JWB56_09525 PF03466 LysR substrate binding domain JWB56_09525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_09540 PF00698 Acyl transferase domain JWB56_09545 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JWB56_09555 PF01039 Carboxyl transferase domain JWB56_09560 PF06857 Malonate decarboxylase delta subunit (MdcD) JWB56_09565 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JWB56_09570 PF16957 Malonate decarboxylase, alpha subunit, transporter JWB56_09575 PF07690 Major Facilitator Superfamily JWB56_09590 PF00392 Bacterial regulatory proteins, gntR family JWB56_09595 PF04172 LrgB-like family JWB56_09600 PF03788 LrgA family JWB56_09605 PF03466 LysR substrate binding domain JWB56_09605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_09610 PF14834 Glutathione S-transferase, C-terminal domain JWB56_09610 PF02798 Glutathione S-transferase, N-terminal domain JWB56_09615 PF02798 Glutathione S-transferase, N-terminal domain JWB56_09620 PF03466 LysR substrate binding domain JWB56_09620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_09630 PF00581 Rhodanese-like domain JWB56_09635 PF00132 Bacterial transferase hexapeptide (six repeats) JWB56_09645 PF00266 Aminotransferase class-V JWB56_09650 PF01810 LysE type translocator JWB56_09655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_09655 PF03466 LysR substrate binding domain JWB56_09660 PF00497 Bacterial extracellular solute-binding proteins, family 3 JWB56_09665 PF00497 Bacterial extracellular solute-binding proteins, family 3 JWB56_09670 PF00005 ABC transporter JWB56_09675 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_09680 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_09695 PF00072 Response regulator receiver domain JWB56_09700 PF00072 Response regulator receiver domain JWB56_09700 PF09308 LuxQ, periplasmic JWB56_09700 PF00512 His Kinase A (phospho-acceptor) domain JWB56_09700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_09710 PF13404 AsnC-type helix-turn-helix domain JWB56_09710 PF01037 Lrp/AsnC ligand binding domain JWB56_09720 PF00717 Peptidase S24-like JWB56_09745 PF18011 C-terminal domain found in long catalases JWB56_09745 PF06628 Catalase-related immune-responsive JWB56_09745 PF00199 Catalase JWB56_09790 PF03466 LysR substrate binding domain JWB56_09790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_09810 PF13193 AMP-binding enzyme C-terminal domain JWB56_09810 PF00501 AMP-binding enzyme JWB56_09815 PF00440 Bacterial regulatory proteins, tetR family JWB56_09820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_09820 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_09820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_09825 PF01039 Carboxyl transferase domain JWB56_09830 PF00378 Enoyl-CoA hydratase/isomerase JWB56_09835 PF00364 Biotin-requiring enzyme JWB56_09835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JWB56_09835 PF00289 Biotin carboxylase, N-terminal domain JWB56_09835 PF18140 Propionyl-coenzyme A carboxylase BT domain JWB56_09835 PF02785 Biotin carboxylase C-terminal domain JWB56_09840 PF00682 HMGL-like JWB56_09845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_09845 PF03466 LysR substrate binding domain JWB56_09860 PF12806 Acetyl-CoA dehydrogenase C-terminal like JWB56_09860 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_09860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_09860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_09870 PF07690 Major Facilitator Superfamily JWB56_09880 PF01144 Coenzyme A transferase JWB56_09885 PF01144 Coenzyme A transferase JWB56_09890 PF07690 Major Facilitator Superfamily JWB56_09895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_09895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_09895 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_09900 PF00378 Enoyl-CoA hydratase/isomerase JWB56_09910 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JWB56_09910 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JWB56_09910 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JWB56_09915 PF02803 Thiolase, C-terminal domain JWB56_09915 PF00108 Thiolase, N-terminal domain JWB56_09920 PF09339 IclR helix-turn-helix domain JWB56_09925 PF07690 Major Facilitator Superfamily JWB56_09930 PF03060 Nitronate monooxygenase JWB56_09935 PF00378 Enoyl-CoA hydratase/isomerase JWB56_09940 PF09339 IclR helix-turn-helix domain JWB56_09945 PF02515 CoA-transferase family III JWB56_09950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_09950 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_09950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_09955 PF07690 Major Facilitator Superfamily JWB56_09960 PF13419 Haloacid dehalogenase-like hydrolase JWB56_09965 PF00266 Aminotransferase class-V JWB56_09970 PF01266 FAD dependent oxidoreductase JWB56_09975 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_09980 PF00005 ABC transporter JWB56_09980 PF08402 TOBE domain JWB56_09990 PF07702 UTRA domain JWB56_09990 PF00392 Bacterial regulatory proteins, gntR family JWB56_09995 PF01494 FAD binding domain JWB56_10000 PF09339 IclR helix-turn-helix domain JWB56_10000 PF01614 Bacterial transcriptional regulator JWB56_10005 PF02525 Flavodoxin-like fold JWB56_10010 PF03466 LysR substrate binding domain JWB56_10010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_10015 PF02627 Carboxymuconolactone decarboxylase family JWB56_10020 PF00171 Aldehyde dehydrogenase family JWB56_10030 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JWB56_10040 PF00171 Aldehyde dehydrogenase family JWB56_10045 PF00296 Luciferase-like monooxygenase JWB56_10050 PF01613 Flavin reductase like domain JWB56_10055 PF12697 Alpha/beta hydrolase family JWB56_10075 PF01292 Prokaryotic cytochrome b561 JWB56_10080 PF00199 Catalase JWB56_10085 PF07690 Major Facilitator Superfamily JWB56_10090 PF00682 HMGL-like JWB56_10095 PF02515 CoA-transferase family III JWB56_10125 PF00313 'Cold-shock' DNA-binding domain JWB56_10160 PF00580 UvrD/REP helicase N-terminal domain JWB56_10160 PF13361 UvrD-like helicase C-terminal domain JWB56_10165 PF02463 RecF/RecN/SMC N terminal domain JWB56_10170 PF03061 Thioesterase superfamily JWB56_10175 PF00132 Bacterial transferase hexapeptide (six repeats) JWB56_10180 PF07848 PaaX-like protein JWB56_10180 PF08223 PaaX-like protein C-terminal domain JWB56_10185 PF00501 AMP-binding enzyme JWB56_10185 PF14535 AMP-binding enzyme C-terminal domain JWB56_10190 PF02803 Thiolase, C-terminal domain JWB56_10190 PF00108 Thiolase, N-terminal domain JWB56_10195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JWB56_10195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JWB56_10195 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JWB56_10200 PF00378 Enoyl-CoA hydratase/isomerase JWB56_10205 PF00378 Enoyl-CoA hydratase/isomerase JWB56_10210 PF00111 2Fe-2S iron-sulfur cluster binding domain JWB56_10210 PF00970 Oxidoreductase FAD-binding domain JWB56_10210 PF00175 Oxidoreductase NAD-binding domain JWB56_10215 PF01883 Iron-sulfur cluster assembly protein JWB56_10220 PF05138 Phenylacetic acid catabolic protein JWB56_10225 PF06243 Phenylacetic acid degradation B JWB56_10230 PF05138 Phenylacetic acid catabolic protein JWB56_10235 PF01575 MaoC like domain JWB56_10235 PF00171 Aldehyde dehydrogenase family JWB56_10240 PF03313 Serine dehydratase alpha chain JWB56_10240 PF03315 Serine dehydratase beta chain JWB56_10250 PF13520 Amino acid permease JWB56_10255 PF00171 Aldehyde dehydrogenase family JWB56_10260 PF00083 Sugar (and other) transporter JWB56_10270 PF04324 BFD-like [2Fe-2S] binding domain JWB56_10270 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_10280 PF01266 FAD dependent oxidoreductase JWB56_10285 PF05544 Proline racemase JWB56_10290 PF00392 Bacterial regulatory proteins, gntR family JWB56_10300 PF00701 Dihydrodipicolinate synthetase family JWB56_10310 PF09278 MerR, DNA binding JWB56_10310 PF00376 MerR family regulatory protein JWB56_10320 PF02677 Epoxyqueuosine reductase QueH JWB56_10335 PF07690 Major Facilitator Superfamily JWB56_10340 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JWB56_10350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_10350 PF03466 LysR substrate binding domain JWB56_10370 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JWB56_10375 PF06812 ImpA, N-terminal, type VI secretion system JWB56_10390 PF00691 OmpA family JWB56_10390 PF01389 OmpA-like transmembrane domain JWB56_10400 PF06744 Type VI secretion protein IcmF C-terminal JWB56_10400 PF14331 ImcF-related N-terminal domain JWB56_10400 PF06761 Intracellular multiplication and human macrophage-killing JWB56_10415 PF05947 Type VI secretion system, TssF JWB56_10430 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JWB56_10455 PF00005 ABC transporter JWB56_10460 PF00497 Bacterial extracellular solute-binding proteins, family 3 JWB56_10465 PF01425 Amidase JWB56_10470 PF08753 NikR C terminal nickel binding domain JWB56_10470 PF01402 Ribbon-helix-helix protein, copG family JWB56_10480 PF01638 HxlR-like helix-turn-helix JWB56_10485 PF02525 Flavodoxin-like fold JWB56_10490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JWB56_10490 PF02785 Biotin carboxylase C-terminal domain JWB56_10490 PF00289 Biotin carboxylase, N-terminal domain JWB56_10505 PF08240 Alcohol dehydrogenase GroES-like domain JWB56_10505 PF13823 Alcohol dehydrogenase GroES-associated JWB56_10505 PF00107 Zinc-binding dehydrogenase JWB56_10515 PF00440 Bacterial regulatory proteins, tetR family JWB56_10535 PF00654 Voltage gated chloride channel JWB56_10540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JWB56_10540 PF00364 Biotin-requiring enzyme JWB56_10540 PF00289 Biotin carboxylase, N-terminal domain JWB56_10540 PF02785 Biotin carboxylase C-terminal domain JWB56_10550 PF07286 Protein of unknown function (DUF1445) JWB56_10555 PF03746 LamB/YcsF family JWB56_10560 PF01566 Natural resistance-associated macrophage protein JWB56_10565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_10565 PF03466 LysR substrate binding domain JWB56_10585 PF05593 RHS Repeat JWB56_10585 PF03527 RHS protein JWB56_10600 PF03527 RHS protein JWB56_10600 PF05593 RHS Repeat JWB56_10605 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JWB56_10605 PF04717 Type VI secretion system, phage-baseplate injector JWB56_10605 PF13296 Putative type VI secretion system Rhs element Vgr JWB56_10630 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JWB56_10630 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JWB56_10650 PF07690 Major Facilitator Superfamily JWB56_10660 PF03279 Bacterial lipid A biosynthesis acyltransferase JWB56_10670 PF00892 EamA-like transporter family JWB56_10675 PF01037 Lrp/AsnC ligand binding domain JWB56_10680 PF01624 MutS domain I JWB56_10680 PF05190 MutS family domain IV JWB56_10680 PF05192 MutS domain III JWB56_10680 PF05188 MutS domain II JWB56_10680 PF00488 MutS domain V JWB56_10690 PF11953 Domain of unknown function (DUF3470) JWB56_10690 PF00037 4Fe-4S binding domain JWB56_10700 PF01596 O-methyltransferase JWB56_10710 PF00132 Bacterial transferase hexapeptide (six repeats) JWB56_10715 PF01205 Uncharacterized protein family UPF0029 JWB56_10725 PF00664 ABC transporter transmembrane region JWB56_10725 PF00005 ABC transporter JWB56_10725 PF03412 Peptidase C39 family JWB56_10730 PF02321 Outer membrane efflux protein JWB56_10735 PF00005 ABC transporter JWB56_10735 PF12399 Branched-chain amino acid ATP-binding cassette transporter JWB56_10740 PF03968 OstA-like protein JWB56_10755 PF01380 SIS domain JWB56_10755 PF00571 CBS domain JWB56_10760 PF01406 tRNA synthetases class I (C) catalytic domain JWB56_10760 PF09190 DALR domain JWB56_10805 PF12708 Pectate lyase superfamily protein JWB56_10805 PF13229 Right handed beta helix region JWB56_10825 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) JWB56_10845 PF06381 Protein of unknown function (DUF1073) JWB56_10915 PF01638 HxlR-like helix-turn-helix JWB56_10920 PF07690 Major Facilitator Superfamily JWB56_10945 PF14748 Pyrroline-5-carboxylate reductase dimerisation JWB56_10945 PF03807 NADP oxidoreductase coenzyme F420-dependent JWB56_10990 PF13742 OB-fold nucleic acid binding domain JWB56_10990 PF02601 Exonuclease VII, large subunit JWB56_11025 PF09278 MerR, DNA binding JWB56_11025 PF00376 MerR family regulatory protein JWB56_11030 PF00403 Heavy-metal-associated domain JWB56_11040 PF03466 LysR substrate binding domain JWB56_11040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_11045 PF00355 Rieske [2Fe-2S] domain JWB56_11045 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JWB56_11050 PF00866 Ring hydroxylating beta subunit JWB56_11055 PF00111 2Fe-2S iron-sulfur cluster binding domain JWB56_11055 PF00970 Oxidoreductase FAD-binding domain JWB56_11055 PF00175 Oxidoreductase NAD-binding domain JWB56_11060 PF00106 short chain dehydrogenase JWB56_11065 PF03594 Benzoate membrane transport protein JWB56_11070 PF07690 Major Facilitator Superfamily JWB56_11080 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JWB56_11080 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JWB56_11085 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JWB56_11085 PF00270 DEAD/DEAH box helicase JWB56_11085 PF11898 Domain of unknown function (DUF3418) JWB56_11085 PF00271 Helicase conserved C-terminal domain JWB56_11085 PF04408 Helicase associated domain (HA2) JWB56_11090 PF10417 C-terminal domain of 1-Cys peroxiredoxin JWB56_11090 PF00578 AhpC/TSA family JWB56_11110 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_11110 PF13192 Thioredoxin domain JWB56_11120 PF02798 Glutathione S-transferase, N-terminal domain JWB56_11120 PF00043 Glutathione S-transferase, C-terminal domain JWB56_11130 PF02390 Putative methyltransferase JWB56_11135 PF13417 Glutathione S-transferase, N-terminal domain JWB56_11135 PF00043 Glutathione S-transferase, C-terminal domain JWB56_11145 PF13488 Glycine zipper JWB56_11145 PF00691 OmpA family JWB56_11150 PF01979 Amidohydrolase family JWB56_11155 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JWB56_11155 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JWB56_11165 PF10672 S-adenosylmethionine-dependent methyltransferase JWB56_11165 PF01170 Putative RNA methylase family UPF0020 JWB56_11165 PF02926 THUMP domain JWB56_11180 PF10431 C-terminal, D2-small domain, of ClpB protein JWB56_11180 PF00004 ATPase family associated with various cellular activities (AAA) JWB56_11180 PF07724 AAA domain (Cdc48 subfamily) JWB56_11180 PF02861 Clp amino terminal domain, pathogenicity island component JWB56_11180 PF17871 AAA lid domain JWB56_11195 PF02566 OsmC-like protein JWB56_11205 PF13545 Crp-like helix-turn-helix domain JWB56_11205 PF00027 Cyclic nucleotide-binding domain JWB56_11210 PF00248 Aldo/keto reductase family JWB56_11225 PF00709 Adenylosuccinate synthetase JWB56_11230 PF13393 Histidyl-tRNA synthetase JWB56_11235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JWB56_11235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JWB56_11240 PF02272 DHHA1 domain JWB56_11240 PF01411 tRNA synthetases class II (A) JWB56_11240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JWB56_11245 PF00696 Amino acid kinase family JWB56_11245 PF01842 ACT domain JWB56_11245 PF13840 ACT domain JWB56_11250 PF02599 Global regulator protein family JWB56_11255 PF01351 Ribonuclease HII JWB56_11265 PF01292 Prokaryotic cytochrome b561 JWB56_11270 PF00962 Adenosine/AMP deaminase JWB56_11275 PF00860 Permease family JWB56_11285 PF00743 Flavin-binding monooxygenase-like JWB56_11290 PF00106 short chain dehydrogenase JWB56_11300 PF17954 Quercetinase C-terminal cupin domain JWB56_11300 PF02678 Pirin JWB56_11315 PF00106 short chain dehydrogenase JWB56_11320 PF00743 Flavin-binding monooxygenase-like JWB56_11325 PF04072 Leucine carboxyl methyltransferase JWB56_11330 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JWB56_11330 PF12833 Helix-turn-helix domain JWB56_11335 PF00743 Flavin-binding monooxygenase-like JWB56_11340 PF00106 short chain dehydrogenase JWB56_11345 PF07859 alpha/beta hydrolase fold JWB56_11350 PF05199 GMC oxidoreductase JWB56_11355 PF03573 outer membrane porin, OprD family JWB56_11360 PF07690 Major Facilitator Superfamily JWB56_11365 PF00355 Rieske [2Fe-2S] domain JWB56_11370 PF00175 Oxidoreductase NAD-binding domain JWB56_11370 PF00111 2Fe-2S iron-sulfur cluster binding domain JWB56_11385 PF07690 Major Facilitator Superfamily JWB56_11390 PF00378 Enoyl-CoA hydratase/isomerase JWB56_11395 PF00171 Aldehyde dehydrogenase family JWB56_11405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_11405 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_11405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_11410 PF03573 outer membrane porin, OprD family JWB56_11425 PF07519 Tannase and feruloyl esterase JWB56_11430 PF00392 Bacterial regulatory proteins, gntR family JWB56_11430 PF07729 FCD domain JWB56_11435 PF00171 Aldehyde dehydrogenase family JWB56_11440 PF00701 Dihydrodipicolinate synthetase family JWB56_11445 PF13378 Enolase C-terminal domain-like JWB56_11450 PF07690 Major Facilitator Superfamily JWB56_11455 PF08666 SAF domain JWB56_11455 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JWB56_11460 PF00892 EamA-like transporter family JWB56_11465 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JWB56_11465 PF12833 Helix-turn-helix domain JWB56_11470 PF00171 Aldehyde dehydrogenase family JWB56_11490 PF04958 Arginine N-succinyltransferase beta subunit JWB56_11495 PF00202 Aminotransferase class-III JWB56_11505 PF00171 Aldehyde dehydrogenase family JWB56_11515 PF07729 FCD domain JWB56_11515 PF00392 Bacterial regulatory proteins, gntR family JWB56_11525 PF00324 Amino acid permease JWB56_11530 PF01266 FAD dependent oxidoreductase JWB56_11535 PF00324 Amino acid permease JWB56_11560 PF03527 RHS protein JWB56_11560 PF05593 RHS Repeat JWB56_11565 PF04717 Type VI secretion system, phage-baseplate injector JWB56_11565 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JWB56_11565 PF13296 Putative type VI secretion system Rhs element Vgr JWB56_11585 PF03180 NLPA lipoprotein JWB56_11595 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JWB56_11595 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_11600 PF00764 Arginosuccinate synthase JWB56_11605 PF01590 GAF domain JWB56_11605 PF00563 EAL domain JWB56_11605 PF00990 Diguanylate cyclase, GGDEF domain JWB56_11605 PF00360 Phytochrome region JWB56_11610 PF01979 Amidohydrolase family JWB56_11615 PF00929 Exonuclease JWB56_11625 PF00593 TonB dependent receptor JWB56_11625 PF07715 TonB-dependent Receptor Plug Domain JWB56_11655 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_11655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JWB56_11660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JWB56_11660 PF00005 ABC transporter JWB56_11665 PF12911 N-terminal TM domain of oligopeptide transport permease C JWB56_11665 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_11670 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_11675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JWB56_11680 PF01464 Transglycosylase SLT domain JWB56_11680 PF01464 Transglycosylase SLT domain JWB56_11680 PF01476 LysM domain JWB56_11680 PF01476 LysM domain JWB56_11685 PF00929 Exonuclease JWB56_11695 PF00293 NUDIX domain JWB56_11695 PF09297 NADH pyrophosphatase zinc ribbon domain JWB56_11705 PF04972 BON domain JWB56_11710 PF02021 Uncharacterised protein family UPF0102 JWB56_11715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JWB56_11725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_11725 PF03466 LysR substrate binding domain JWB56_11730 PF01810 LysE type translocator JWB56_11740 PF13411 MerR HTH family regulatory protein JWB56_11750 PF01494 FAD binding domain JWB56_11755 PF01494 FAD binding domain JWB56_11760 PF00557 Metallopeptidase family M24 JWB56_11760 PF05195 Aminopeptidase P, N-terminal domain JWB56_11810 PF05362 Lon protease (S16) C-terminal proteolytic domain JWB56_11810 PF00004 ATPase family associated with various cellular activities (AAA) JWB56_11810 PF02190 ATP-dependent protease La (LON) substrate-binding domain JWB56_11815 PF02590 Predicted SPOUT methyltransferase JWB56_11820 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JWB56_11830 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JWB56_11830 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JWB56_11835 PF04060 Putative Fe-S cluster JWB56_11840 PF00633 Helix-hairpin-helix motif JWB56_11840 PF00730 HhH-GPD superfamily base excision DNA repair protein JWB56_11840 PF10576 Iron-sulfur binding domain of endonuclease III JWB56_11850 PF05191 Adenylate kinase, active site lid JWB56_11865 PF00905 Penicillin binding protein transpeptidase domain JWB56_11865 PF03717 Penicillin-binding Protein dimerisation domain JWB56_11880 PF02492 CobW/HypB/UreG, nucleotide-binding domain JWB56_11885 PF01730 UreF JWB56_11890 PF05194 UreE urease accessory protein, C-terminal domain JWB56_11890 PF02814 UreE urease accessory protein, N-terminal domain JWB56_11900 PF00547 Urease, gamma subunit JWB56_11905 PF01774 UreD urease accessory protein JWB56_11920 PF00463 Isocitrate lyase family JWB56_11925 PF03466 LysR substrate binding domain JWB56_11925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_11930 PF00571 CBS domain JWB56_11930 PF01595 Cyclin M transmembrane N-terminal domain JWB56_11930 PF03471 Transporter associated domain JWB56_11935 PF03600 Citrate transporter JWB56_11950 PF00009 Elongation factor Tu GTP binding domain JWB56_11955 PF01507 Phosphoadenosine phosphosulfate reductase family JWB56_11965 PF14052 Capsule assembly protein Wzi JWB56_11970 PF01336 OB-fold nucleic acid binding domain JWB56_11970 PF00152 tRNA synthetases class II (D, K and N) JWB56_11985 PF00301 Rubredoxin JWB56_11990 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_11990 PF18113 Rubredoxin binding C-terminal domain JWB56_11995 PF00561 alpha/beta hydrolase fold JWB56_12000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_12000 PF03466 LysR substrate binding domain JWB56_12015 PF00912 Transglycosylase JWB56_12020 PF01694 Rhomboid family JWB56_12030 PF00005 ABC transporter JWB56_12035 PF13472 GDSL-like Lipase/Acylhydrolase family JWB56_12040 PF00484 Carbonic anhydrase JWB56_12045 PF00561 alpha/beta hydrolase fold JWB56_12055 PF07715 TonB-dependent Receptor Plug Domain JWB56_12055 PF00593 TonB dependent receptor JWB56_12060 PF01106 NifU-like domain JWB56_12060 PF01521 Iron-sulphur cluster biosynthesis JWB56_12070 PF00884 Sulfatase JWB56_12075 PF03781 Sulfatase-modifying factor enzyme 1 JWB56_12090 PF00291 Pyridoxal-phosphate dependent enzyme JWB56_12095 PF01384 Phosphate transporter family JWB56_12100 PF02310 B12 binding domain JWB56_12100 PF02607 B12 binding domain JWB56_12100 PF02965 Vitamin B12 dependent methionine synthase, activation domain JWB56_12100 PF00809 Pterin binding enzyme JWB56_12100 PF02574 Homocysteine S-methyltransferase JWB56_12105 PF02780 Transketolase, C-terminal domain JWB56_12105 PF02779 Transketolase, pyrimidine binding domain JWB56_12110 PF00456 Transketolase, thiamine diphosphate binding domain JWB56_12115 PF07690 Major Facilitator Superfamily JWB56_12125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_12125 PF03466 LysR substrate binding domain JWB56_12135 PF01263 Aldose 1-epimerase JWB56_12140 PF07690 Major Facilitator Superfamily JWB56_12145 PF02311 AraC-like ligand binding domain JWB56_12145 PF12833 Helix-turn-helix domain JWB56_12150 PF04960 Glutaminase JWB56_12155 PF01327 Polypeptide deformylase JWB56_12160 PF07690 Major Facilitator Superfamily JWB56_12170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JWB56_12170 PF00205 Thiamine pyrophosphate enzyme, central domain JWB56_12170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JWB56_12175 PF00171 Aldehyde dehydrogenase family JWB56_12180 PF01958 Domain of unknown function DUF108 JWB56_12180 PF03447 Homoserine dehydrogenase, NAD binding domain JWB56_12190 PF12697 Alpha/beta hydrolase family JWB56_12200 PF07690 Major Facilitator Superfamily JWB56_12205 PF14759 Reductase C-terminal JWB56_12205 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_12210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JWB56_12220 PF00355 Rieske [2Fe-2S] domain JWB56_12230 PF00355 Rieske [2Fe-2S] domain JWB56_12235 PF09339 IclR helix-turn-helix domain JWB56_12235 PF01614 Bacterial transcriptional regulator JWB56_12250 PF00378 Enoyl-CoA hydratase/isomerase JWB56_12260 PF00535 Glycosyl transferase family 2 JWB56_12265 PF01522 Polysaccharide deacetylase JWB56_12265 PF14883 Hypothetical glycosyl hydrolase family 13 JWB56_12270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JWB56_12275 PF07152 YaeQ protein JWB56_12280 PF00375 Sodium:dicarboxylate symporter family JWB56_12285 PF02492 CobW/HypB/UreG, nucleotide-binding domain JWB56_12285 PF07683 Cobalamin synthesis protein cobW C-terminal domain JWB56_12295 PF03061 Thioesterase superfamily JWB56_12305 PF02028 BCCT, betaine/carnitine/choline family transporter JWB56_12310 PF02028 BCCT, betaine/carnitine/choline family transporter JWB56_12315 PF13977 BetI-type transcriptional repressor, C-terminal JWB56_12315 PF00440 Bacterial regulatory proteins, tetR family JWB56_12320 PF00171 Aldehyde dehydrogenase family JWB56_12325 PF00732 GMC oxidoreductase JWB56_12325 PF05199 GMC oxidoreductase JWB56_12330 PF06039 Malate:quinone oxidoreductase (Mqo) JWB56_12340 PF02574 Homocysteine S-methyltransferase JWB56_12345 PF13520 Amino acid permease JWB56_12370 PF01126 Heme oxygenase JWB56_12380 PF04575 Protein of unknown function (DUF560) JWB56_12390 PF07715 TonB-dependent Receptor Plug Domain JWB56_12390 PF00593 TonB dependent receptor JWB56_12400 PF04542 Sigma-70 region 2 JWB56_12400 PF08281 Sigma-70, region 4 JWB56_12410 PF00701 Dihydrodipicolinate synthetase family JWB56_12415 PF00083 Sugar (and other) transporter JWB56_12445 PF04851 Type III restriction enzyme, res subunit JWB56_12445 PF08774 VRR-NUC domain JWB56_12475 PF13784 Fic/DOC family N-terminal JWB56_12475 PF02661 Fic/DOC family JWB56_12535 PF13356 Arm DNA-binding domain JWB56_12535 PF00589 Phage integrase family JWB56_12550 PF07690 Major Facilitator Superfamily JWB56_12555 PF13533 Biotin-lipoyl like JWB56_12560 PF03061 Thioesterase superfamily JWB56_12565 PF00490 Delta-aminolevulinic acid dehydratase JWB56_12570 PF01266 FAD dependent oxidoreductase JWB56_12575 PF01370 NAD dependent epimerase/dehydratase family JWB56_12575 PF08338 Domain of unknown function (DUF1731) JWB56_12595 PF00149 Calcineurin-like phosphoesterase JWB56_12595 PF12320 Type 5 capsule protein repressor C-terminal domain JWB56_12605 PF01168 Alanine racemase, N-terminal domain JWB56_12610 PF00437 Type II/IV secretion system protein JWB56_12615 PF00437 Type II/IV secretion system protein JWB56_12620 PF01475 Ferric uptake regulator family JWB56_12625 PF04355 SmpA / OmlA family JWB56_12630 PF03658 RnfH family Ubiquitin JWB56_12640 PF01814 Hemerythrin HHE cation binding domain JWB56_12645 PF13230 Glutamine amidotransferases class-II JWB56_12655 PF00696 Amino acid kinase family JWB56_12660 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JWB56_12660 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JWB56_12660 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JWB56_12660 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JWB56_12665 PF00692 dUTPase JWB56_12670 PF13361 UvrD-like helicase C-terminal domain JWB56_12670 PF00580 UvrD/REP helicase N-terminal domain JWB56_12675 PF00691 OmpA family JWB56_12675 PF13488 Glycine zipper JWB56_12680 PF01553 Acyltransferase JWB56_12690 PF03775 Septum formation inhibitor MinC, C-terminal domain JWB56_12695 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JWB56_12700 PF03776 Septum formation topological specificity factor MinE JWB56_12710 PF01810 LysE type translocator JWB56_12715 PF01580 FtsK/SpoIIIE family JWB56_12715 PF17854 FtsK alpha domain JWB56_12715 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JWB56_12715 PF09397 Ftsk gamma domain JWB56_12720 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_12725 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JWB56_12730 PF04377 Arginine-tRNA-protein transferase, C terminus JWB56_12730 PF04376 Arginine-tRNA-protein transferase, N terminus JWB56_12735 PF00583 Acetyltransferase (GNAT) family JWB56_12750 PF03143 Elongation factor Tu C-terminal domain JWB56_12750 PF00009 Elongation factor Tu GTP binding domain JWB56_12750 PF03144 Elongation factor Tu domain 2 JWB56_12755 PF03764 Elongation factor G, domain IV JWB56_12755 PF14492 Elongation Factor G, domain II JWB56_12755 PF00009 Elongation factor Tu GTP binding domain JWB56_12755 PF03144 Elongation factor Tu domain 2 JWB56_12755 PF00679 Elongation factor G C-terminus JWB56_12760 PF00177 Ribosomal protein S7p/S5e JWB56_12765 PF00164 Ribosomal protein S12/S23 JWB56_12775 PF02801 Beta-ketoacyl synthase, C-terminal domain JWB56_12775 PF00109 Beta-ketoacyl synthase, N-terminal domain JWB56_12780 PF03653 Uncharacterised protein family (UPF0093) JWB56_12785 PF02678 Pirin JWB56_12785 PF05726 Pirin C-terminal cupin domain JWB56_12795 PF00795 Carbon-nitrogen hydrolase JWB56_12795 PF02540 NAD synthase JWB56_12810 PF00970 Oxidoreductase FAD-binding domain JWB56_12810 PF00111 2Fe-2S iron-sulfur cluster binding domain JWB56_12810 PF00175 Oxidoreductase NAD-binding domain JWB56_12815 PF00171 Aldehyde dehydrogenase family JWB56_12820 PF00355 Rieske [2Fe-2S] domain JWB56_12820 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JWB56_12825 PF07859 alpha/beta hydrolase fold JWB56_12830 PF02028 BCCT, betaine/carnitine/choline family transporter JWB56_12835 PF00180 Isocitrate/isopropylmalate dehydrogenase JWB56_12840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_12840 PF03466 LysR substrate binding domain JWB56_12860 PF00037 4Fe-4S binding domain JWB56_12865 PF01467 Cytidylyltransferase-like JWB56_12870 PF01668 SmpB protein JWB56_12875 PF03358 NADPH-dependent FMN reductase JWB56_12880 PF02578 Multi-copper polyphenol oxidoreductase laccase JWB56_12885 PF00849 RNA pseudouridylate synthase JWB56_12885 PF01479 S4 domain JWB56_12890 PF13525 Outer membrane lipoprotein JWB56_12895 PF08278 DNA primase DnaG DnaB-binding JWB56_12895 PF10410 DnaB-helicase binding domain of primase JWB56_12895 PF01807 CHC2 zinc finger JWB56_12895 PF08275 DNA primase catalytic core, N-terminal domain JWB56_12900 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JWB56_12900 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JWB56_12900 PF01488 Shikimate / quinate 5-dehydrogenase JWB56_12910 PF03550 Outer membrane lipoprotein LolB JWB56_12915 PF00288 GHMP kinases N terminal domain JWB56_12915 PF08544 GHMP kinases C terminal JWB56_12940 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JWB56_12940 PF14572 Phosphoribosyl synthetase-associated domain JWB56_12945 PF01386 Ribosomal L25p family JWB56_12950 PF01195 Peptidyl-tRNA hydrolase JWB56_12955 PF02261 Aspartate decarboxylase JWB56_12970 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JWB56_12980 PF08543 Phosphomethylpyrimidine kinase JWB56_12980 PF03070 TENA/THI-4/PQQC family JWB56_12980 PF02581 Thiamine monophosphate synthase JWB56_12985 PF04972 BON domain JWB56_12985 PF01476 LysM domain JWB56_12990 PF00550 Phosphopantetheine attachment site JWB56_13000 PF00698 Acyl transferase domain JWB56_13005 PF01783 Ribosomal L32p protein family JWB56_13010 PF02620 Large ribosomal RNA subunit accumulation protein YceD JWB56_13015 PF04315 Elongation factor P hydroxylase JWB56_13020 PF01300 Telomere recombination JWB56_13025 PF02616 Segregation and condensation protein ScpA JWB56_13030 PF04079 Segregation and condensation complex subunit ScpB JWB56_13035 PF01479 S4 domain JWB56_13035 PF00849 RNA pseudouridylate synthase JWB56_13050 PF00155 Aminotransferase class I and II JWB56_13055 PF06968 Biotin and Thiamin Synthesis associated domain JWB56_13055 PF04055 Radical SAM superfamily JWB56_13055 PF00202 Aminotransferase class-III JWB56_13060 PF12697 Alpha/beta hydrolase family JWB56_13060 PF08241 Methyltransferase domain JWB56_13070 PF00982 Glycosyltransferase family 20 JWB56_13075 PF07690 Major Facilitator Superfamily JWB56_13080 PF00210 Ferritin-like domain JWB56_13085 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JWB56_13085 PF12826 Helix-hairpin-helix motif JWB56_13085 PF03120 NAD-dependent DNA ligase OB-fold domain JWB56_13085 PF01653 NAD-dependent DNA ligase adenylation domain JWB56_13085 PF00533 BRCA1 C Terminus (BRCT) domain JWB56_13095 PF06470 SMC proteins Flexible Hinge Domain JWB56_13095 PF02463 RecF/RecN/SMC N terminal domain JWB56_13105 PF01925 Sulfite exporter TauE/SafE JWB56_13115 PF03309 Type III pantothenate kinase JWB56_13120 PF02881 SRP54-type protein, helical bundle domain JWB56_13120 PF00448 SRP54-type protein, GTPase domain JWB56_13120 PF02978 Signal peptide binding domain JWB56_13130 PF01207 Dihydrouridine synthase (Dus) JWB56_13160 PF00692 dUTPase JWB56_13175 PF01048 Phosphorylase superfamily JWB56_13180 PF10609 NUBPL iron-transfer P-loop NTPase JWB56_13190 PF09334 tRNA synthetases class I (M) JWB56_13190 PF01588 Putative tRNA binding domain JWB56_13215 PF13533 Biotin-lipoyl like JWB56_13220 PF00291 Pyridoxal-phosphate dependent enzyme JWB56_13235 PF05552 Conserved TM helix JWB56_13250 PF00175 Oxidoreductase NAD-binding domain JWB56_13250 PF00970 Oxidoreductase FAD-binding domain JWB56_13255 PF03466 LysR substrate binding domain JWB56_13255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_13265 PF00313 'Cold-shock' DNA-binding domain JWB56_13275 PF00361 Proton-conducting membrane transporter JWB56_13280 PF00361 Proton-conducting membrane transporter JWB56_13285 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JWB56_13285 PF00361 Proton-conducting membrane transporter JWB56_13290 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JWB56_13295 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JWB56_13300 PF12838 4Fe-4S dicluster domain JWB56_13305 PF00146 NADH dehydrogenase JWB56_13310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JWB56_13310 PF00384 Molybdopterin oxidoreductase JWB56_13310 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JWB56_13315 PF10531 SLBB domain JWB56_13315 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JWB56_13315 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JWB56_13325 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JWB56_13325 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JWB56_13330 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JWB56_13335 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JWB56_13340 PF00990 Diguanylate cyclase, GGDEF domain JWB56_13340 PF17151 Periplasmic sensor domain JWB56_13350 PF00512 His Kinase A (phospho-acceptor) domain JWB56_13350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_13350 PF00672 HAMP domain JWB56_13355 PF00072 Response regulator receiver domain JWB56_13355 PF00486 Transcriptional regulatory protein, C terminal JWB56_13365 PF00317 Ribonucleotide reductase, all-alpha domain JWB56_13365 PF03477 ATP cone domain JWB56_13365 PF02867 Ribonucleotide reductase, barrel domain JWB56_13375 PF00268 Ribonucleotide reductase, small chain JWB56_13385 PF02567 Phenazine biosynthesis-like protein JWB56_13405 PF00440 Bacterial regulatory proteins, tetR family JWB56_13405 PF16295 Tetracyclin repressor-like, C-terminal domain JWB56_13410 PF01613 Flavin reductase like domain JWB56_13415 PF01717 Cobalamin-independent synthase, Catalytic domain JWB56_13415 PF08267 Cobalamin-independent synthase, N-terminal domain JWB56_13425 PF03466 LysR substrate binding domain JWB56_13425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_13430 PF01810 LysE type translocator JWB56_13440 PF12833 Helix-turn-helix domain JWB56_13440 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JWB56_13445 PF01546 Peptidase family M20/M25/M40 JWB56_13445 PF07687 Peptidase dimerisation domain JWB56_13455 PF03466 LysR substrate binding domain JWB56_13455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_13460 PF07690 Major Facilitator Superfamily JWB56_13470 PF03466 LysR substrate binding domain JWB56_13470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_13475 PF14537 Cytochrome c3 JWB56_13475 PF00890 FAD binding domain JWB56_13485 PF02515 CoA-transferase family III JWB56_13490 PF07690 Major Facilitator Superfamily JWB56_13495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_13495 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_13495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_13500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_13500 PF03466 LysR substrate binding domain JWB56_13505 PF00107 Zinc-binding dehydrogenase JWB56_13505 PF08240 Alcohol dehydrogenase GroES-like domain JWB56_13510 PF00962 Adenosine/AMP deaminase JWB56_13535 PF02445 Quinolinate synthetase A protein JWB56_13540 PF01960 ArgJ family JWB56_13545 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JWB56_13545 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JWB56_13550 PF00893 Small Multidrug Resistance protein JWB56_13560 PF05275 Copper resistance protein B precursor (CopB) JWB56_13565 PF07731 Multicopper oxidase JWB56_13565 PF07732 Multicopper oxidase JWB56_13565 PF00394 Multicopper oxidase JWB56_13580 PF00834 Ribulose-phosphate 3 epimerase family JWB56_13590 PF00756 Putative esterase JWB56_13600 PF04445 Putative SAM-dependent methyltransferase JWB56_13605 PF00814 Glycoprotease family JWB56_13610 PF00132 Bacterial transferase hexapeptide (six repeats) JWB56_13615 PF00293 NUDIX domain JWB56_13660 PF00155 Aminotransferase class I and II JWB56_13665 PF00815 Histidinol dehydrogenase JWB56_13670 PF01634 ATP phosphoribosyltransferase JWB56_13675 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JWB56_13680 PF01722 BolA-like protein JWB56_13685 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JWB56_13690 PF04552 Sigma-54, DNA binding domain JWB56_13690 PF04963 Sigma-54 factor, core binding domain JWB56_13690 PF00309 Sigma-54 factor, Activator interacting domain (AID) JWB56_13735 PF00795 Carbon-nitrogen hydrolase JWB56_13745 PF01047 MarR family JWB56_13750 PF02566 OsmC-like protein JWB56_13755 PF00437 Type II/IV secretion system protein JWB56_13775 PF01367 5'-3' exonuclease, C-terminal SAM fold JWB56_13775 PF00476 DNA polymerase family A JWB56_13775 PF01612 3'-5' exonuclease JWB56_13775 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JWB56_13780 PF02325 YGGT family JWB56_13785 PF14748 Pyrroline-5-carboxylate reductase dimerisation JWB56_13785 PF03807 NADP oxidoreductase coenzyme F420-dependent JWB56_13790 PF01171 PP-loop family JWB56_13790 PF09179 TilS substrate binding domain JWB56_13790 PF11734 TilS substrate C-terminal domain JWB56_13795 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JWB56_13800 PF02541 Ppx/GppA phosphatase family JWB56_13805 PF00085 Thioredoxin JWB56_13810 PF07498 Rho termination factor, N-terminal domain JWB56_13810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JWB56_13810 PF07497 Rho termination factor, RNA-binding domain JWB56_13820 PF00216 Bacterial DNA-binding protein JWB56_13825 PF03484 tRNA synthetase B5 domain JWB56_13825 PF03483 B3/4 domain JWB56_13825 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JWB56_13825 PF01588 Putative tRNA binding domain JWB56_13825 PF03147 Ferredoxin-fold anticodon binding domain JWB56_13830 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JWB56_13830 PF01409 tRNA synthetases class II core domain (F) JWB56_13845 PF00453 Ribosomal protein L20 JWB56_13850 PF01632 Ribosomal protein L35 JWB56_13855 PF07690 Major Facilitator Superfamily JWB56_13860 PF09335 SNARE associated Golgi protein JWB56_13865 PF00043 Glutathione S-transferase, C-terminal domain JWB56_13865 PF02798 Glutathione S-transferase, N-terminal domain JWB56_13870 PF05198 Translation initiation factor IF-3, N-terminal domain JWB56_13870 PF00707 Translation initiation factor IF-3, C-terminal domain JWB56_13875 PF02824 TGS domain JWB56_13875 PF03129 Anticodon binding domain JWB56_13875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JWB56_13875 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JWB56_13880 PF13193 AMP-binding enzyme C-terminal domain JWB56_13880 PF00501 AMP-binding enzyme JWB56_13885 PF04751 Protein of unknown function (DUF615) JWB56_13890 PF00381 PTS HPr component phosphorylation site JWB56_13895 PF03668 P-loop ATPase protein family JWB56_13900 PF02569 Pantoate-beta-alanine ligase JWB56_13905 PF02548 Ketopantoate hydroxymethyltransferase JWB56_13910 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JWB56_13915 PF12626 Polymerase A arginine-rich C-terminus JWB56_13915 PF12627 Probable RNA and SrmB- binding site of polymerase A JWB56_13915 PF01743 Poly A polymerase head domain JWB56_13925 PF03819 MazG nucleotide pyrophosphohydrolase domain JWB56_13935 PF04607 Region found in RelA / SpoT proteins JWB56_13935 PF02824 TGS domain JWB56_13935 PF13291 ACT domain JWB56_13940 PF05958 tRNA (Uracil-5-)-methyltransferase JWB56_13950 PF00291 Pyridoxal-phosphate dependent enzyme JWB56_13955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_13955 PF00672 HAMP domain JWB56_13955 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JWB56_13955 PF00072 Response regulator receiver domain JWB56_13955 PF00512 His Kinase A (phospho-acceptor) domain JWB56_13955 PF01627 Hpt domain JWB56_13960 PF00378 Enoyl-CoA hydratase/isomerase JWB56_13965 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JWB56_13965 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JWB56_13970 PF01261 Xylose isomerase-like TIM barrel JWB56_13980 PF00106 short chain dehydrogenase JWB56_13985 PF02233 NAD(P) transhydrogenase beta subunit JWB56_13990 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JWB56_13995 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JWB56_13995 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JWB56_14000 PF00892 EamA-like transporter family JWB56_14010 PF07690 Major Facilitator Superfamily JWB56_14030 PF00394 Multicopper oxidase JWB56_14030 PF07731 Multicopper oxidase JWB56_14030 PF07732 Multicopper oxidase JWB56_14040 PF00072 Response regulator receiver domain JWB56_14040 PF00486 Transcriptional regulatory protein, C terminal JWB56_14045 PF00512 His Kinase A (phospho-acceptor) domain JWB56_14045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_14045 PF00672 HAMP domain JWB56_14050 PF04945 YHS domain JWB56_14125 PF00589 Phage integrase family JWB56_14130 PF01207 Dihydrouridine synthase (Dus) JWB56_14140 PF03466 LysR substrate binding domain JWB56_14140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_14150 PF00899 ThiF family JWB56_14155 PF00330 Aconitase family (aconitate hydratase) JWB56_14155 PF00694 Aconitase C-terminal domain JWB56_14160 PF01026 TatD related DNase JWB56_14175 PF16658 Class II release factor RF3, C-terminal domain JWB56_14175 PF03144 Elongation factor Tu domain 2 JWB56_14175 PF00009 Elongation factor Tu GTP binding domain JWB56_14195 PF03707 Bacterial signalling protein N terminal repeat JWB56_14195 PF00990 Diguanylate cyclase, GGDEF domain JWB56_14195 PF00563 EAL domain JWB56_14200 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JWB56_14200 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JWB56_14205 PF10369 Small subunit of acetolactate synthase JWB56_14210 PF00205 Thiamine pyrophosphate enzyme, central domain JWB56_14210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JWB56_14210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JWB56_14220 PF00133 tRNA synthetases class I (I, L, M and V) JWB56_14220 PF08264 Anticodon-binding domain of tRNA JWB56_14220 PF09334 tRNA synthetases class I (M) JWB56_14220 PF13603 Leucyl-tRNA synthetase, Domain 2 JWB56_14235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JWB56_14240 PF00005 ABC transporter JWB56_14240 PF02687 FtsX-like permease family JWB56_14240 PF12704 MacB-like periplasmic core domain JWB56_14245 PF02321 Outer membrane efflux protein JWB56_14260 PF00929 Exonuclease JWB56_14265 PF03193 RsgA GTPase JWB56_14275 PF00462 Glutaredoxin JWB56_14280 PF02556 Preprotein translocase subunit SecB JWB56_14290 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JWB56_14290 PF01926 50S ribosome-binding GTPase JWB56_14295 PF13360 PQQ-like domain JWB56_14305 PF13393 Histidyl-tRNA synthetase JWB56_14305 PF03129 Anticodon binding domain JWB56_14310 PF04551 GcpE protein JWB56_14315 PF13464 Domain of unknown function (DUF4115) JWB56_14325 PF04055 Radical SAM superfamily JWB56_14330 PF00334 Nucleoside diphosphate kinase JWB56_14335 PF04384 Iron-sulphur cluster assembly JWB56_14340 PF01569 PAP2 superfamily JWB56_14345 PF00534 Glycosyl transferases group 1 JWB56_14345 PF13439 Glycosyltransferase Family 4 JWB56_14350 PF17804 Tail specific protease N-terminal domain JWB56_14350 PF11818 C-terminal domain of tail specific protease (DUF3340) JWB56_14350 PF03572 Peptidase family S41 JWB56_14350 PF00595 PDZ domain JWB56_14355 PF00933 Glycosyl hydrolase family 3 N terminal domain JWB56_14365 PF00561 alpha/beta hydrolase fold JWB56_14370 PF00171 Aldehyde dehydrogenase family JWB56_14375 PF00171 Aldehyde dehydrogenase family JWB56_14380 PF01202 Shikimate kinase JWB56_14385 PF02447 GntP family permease JWB56_14390 PF01081 KDPG and KHG aldolase JWB56_14395 PF00920 Dehydratase family JWB56_14400 PF00871 Acetokinase family JWB56_14405 PF07085 DRTGG domain JWB56_14405 PF01515 Phosphate acetyl/butaryl transferase JWB56_14410 PF05683 Fumarase C-terminus JWB56_14410 PF05681 Fumarate hydratase (Fumerase) JWB56_14425 PF10431 C-terminal, D2-small domain, of ClpB protein JWB56_14425 PF06689 ClpX C4-type zinc finger JWB56_14425 PF07724 AAA domain (Cdc48 subfamily) JWB56_14430 PF00574 Clp protease JWB56_14435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JWB56_14435 PF05697 Bacterial trigger factor protein (TF) JWB56_14435 PF05698 Bacterial trigger factor protein (TF) C-terminus JWB56_14440 PF07715 TonB-dependent Receptor Plug Domain JWB56_14440 PF00593 TonB dependent receptor JWB56_14445 PF18331 PKHD-type hydroxylase C-terminal domain JWB56_14445 PF13640 2OG-Fe(II) oxygenase superfamily JWB56_14450 PF00682 HMGL-like JWB56_14450 PF08502 LeuA allosteric (dimerisation) domain JWB56_14455 PF00561 alpha/beta hydrolase fold JWB56_14460 PF07021 Methionine biosynthesis protein MetW JWB56_14460 PF00561 alpha/beta hydrolase fold JWB56_14470 PF01725 Ham1 family JWB56_14480 PF02416 mttA/Hcf106 family JWB56_14485 PF02416 mttA/Hcf106 family JWB56_14490 PF00902 Sec-independent protein translocase protein (TatC) JWB56_14510 PF01790 Prolipoprotein diacylglyceryl transferase JWB56_14525 PF00303 Thymidylate synthase JWB56_14530 PF00186 Dihydrofolate reductase JWB56_14540 PF01625 Peptide methionine sulfoxide reductase JWB56_14550 PF01618 MotA/TolQ/ExbB proton channel family JWB56_14560 PF00551 Formyl transferase JWB56_14560 PF01842 ACT domain JWB56_14570 PF00171 Aldehyde dehydrogenase family JWB56_14575 PF00830 Ribosomal L28 family JWB56_14580 PF00471 Ribosomal protein L33 JWB56_14585 PF02254 TrkA-N domain JWB56_14585 PF00999 Sodium/hydrogen exchanger family JWB56_14605 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JWB56_14610 PF00580 UvrD/REP helicase N-terminal domain JWB56_14610 PF13361 UvrD-like helicase C-terminal domain JWB56_14625 PF01131 DNA topoisomerase JWB56_14625 PF08272 Topoisomerase I zinc-ribbon-like JWB56_14625 PF01751 Toprim domain JWB56_14625 PF01396 Topoisomerase DNA binding C4 zinc finger JWB56_14635 PF01638 HxlR-like helix-turn-helix JWB56_14640 PF08240 Alcohol dehydrogenase GroES-like domain JWB56_14640 PF00107 Zinc-binding dehydrogenase JWB56_14645 PF04102 SlyX JWB56_14650 PF12848 ABC transporter JWB56_14650 PF16326 ABC transporter C-terminal domain JWB56_14650 PF00005 ABC transporter JWB56_14655 PF01810 LysE type translocator JWB56_14660 PF03279 Bacterial lipid A biosynthesis acyltransferase JWB56_14670 PF00375 Sodium:dicarboxylate symporter family JWB56_14680 PF02774 Semialdehyde dehydrogenase, dimerisation domain JWB56_14680 PF01118 Semialdehyde dehydrogenase, NAD binding domain JWB56_14700 PF01416 tRNA pseudouridine synthase JWB56_14710 PF01176 Translation initiation factor 1A / IF-1 JWB56_14725 PF00180 Isocitrate/isopropylmalate dehydrogenase JWB56_14735 PF00694 Aconitase C-terminal domain JWB56_14740 PF00330 Aconitase family (aconitate hydratase) JWB56_14750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_14750 PF03466 LysR substrate binding domain JWB56_14760 PF00293 NUDIX domain JWB56_14765 PF02896 PEP-utilising enzyme, TIM barrel domain JWB56_14765 PF00391 PEP-utilising enzyme, mobile domain JWB56_14765 PF05524 PEP-utilising enzyme, N-terminal JWB56_14765 PF01590 GAF domain JWB56_14770 PF00141 Peroxidase JWB56_14775 PF12706 Beta-lactamase superfamily domain JWB56_14780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_14780 PF03466 LysR substrate binding domain JWB56_14790 PF02798 Glutathione S-transferase, N-terminal domain JWB56_14795 PF08279 HTH domain JWB56_14795 PF13280 WYL domain JWB56_14800 PF13419 Haloacid dehalogenase-like hydrolase JWB56_14805 PF01479 S4 domain JWB56_14805 PF00849 RNA pseudouridylate synthase JWB56_14815 PF10150 Ribonuclease E/G family JWB56_14815 PF00575 S1 RNA binding domain JWB56_14815 PF12111 Polyribonucleotide phosphorylase C terminal JWB56_14820 PF13193 AMP-binding enzyme C-terminal domain JWB56_14820 PF00501 AMP-binding enzyme JWB56_14835 PF03466 LysR substrate binding domain JWB56_14835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_14840 PF00106 short chain dehydrogenase JWB56_14845 PF04055 Radical SAM superfamily JWB56_14845 PF06969 HemN C-terminal domain JWB56_14855 PF01554 MatE JWB56_14860 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_14860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_14860 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JWB56_14865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_14865 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JWB56_14870 PF03109 ABC1 family JWB56_14875 PF01197 Ribosomal protein L31 JWB56_14885 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JWB56_14895 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_14895 PF13247 4Fe-4S dicluster domain JWB56_14895 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JWB56_14905 PF03884 DNA gyrase inhibitor YacG JWB56_14910 PF00753 Metallo-beta-lactamase superfamily JWB56_14915 PF00762 Ferrochelatase JWB56_14925 PF01177 Asp/Glu/Hydantoin racemase JWB56_14945 PF01206 Sulfurtransferase TusA JWB56_14950 PF00571 CBS domain JWB56_14950 PF03471 Transporter associated domain JWB56_14955 PF00795 Carbon-nitrogen hydrolase JWB56_14960 PF01588 Putative tRNA binding domain JWB56_14970 PF08334 Type II secretion system (T2SS), protein G JWB56_14970 PF07963 Prokaryotic N-terminal methylation motif JWB56_14975 PF00482 Type II secretion system (T2SS), protein F JWB56_14980 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JWB56_14980 PF00270 DEAD/DEAH box helicase JWB56_14980 PF00271 Helicase conserved C-terminal domain JWB56_14980 PF17764 3′ DNA-binding domain (3′BD) JWB56_14980 PF18074 Primosomal protein N C-terminal domain JWB56_14985 PF00999 Sodium/hydrogen exchanger family JWB56_14985 PF02254 TrkA-N domain JWB56_14990 PF01430 Hsp33 protein JWB56_15000 PF01556 DnaJ C terminal domain JWB56_15000 PF00226 DnaJ domain JWB56_15010 PF01544 CorA-like Mg2+ transporter protein JWB56_15015 PF01138 3' exoribonuclease family, domain 1 JWB56_15015 PF00575 S1 RNA binding domain JWB56_15015 PF03725 3' exoribonuclease family, domain 2 JWB56_15015 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JWB56_15015 PF00013 KH domain JWB56_15020 PF00312 Ribosomal protein S15 JWB56_15025 PF00144 Beta-lactamase JWB56_15030 PF13538 UvrD-like helicase C-terminal domain JWB56_15035 PF13361 UvrD-like helicase C-terminal domain JWB56_15035 PF00580 UvrD/REP helicase N-terminal domain JWB56_15035 PF12705 PD-(D/E)XK nuclease superfamily JWB56_15040 PF17946 RecC C-terminal domain JWB56_15050 PF03976 Polyphosphate kinase 2 (PPK2) JWB56_15060 PF01209 ubiE/COQ5 methyltransferase family JWB56_15070 PF03109 ABC1 family JWB56_15075 PF01494 FAD binding domain JWB56_15080 PF01502 Phosphoribosyl-AMP cyclohydrolase JWB56_15095 PF13244 Domain of unknown function (DUF4040) JWB56_15095 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JWB56_15095 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JWB56_15095 PF00361 Proton-conducting membrane transporter JWB56_15100 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JWB56_15105 PF00361 Proton-conducting membrane transporter JWB56_15110 PF01899 Na+/H+ ion antiporter subunit JWB56_15115 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JWB56_15120 PF03334 Na+/H+ antiporter subunit JWB56_15125 PF02033 Ribosome-binding factor A JWB56_15130 PF00009 Elongation factor Tu GTP binding domain JWB56_15130 PF11987 Translation-initiation factor 2 JWB56_15130 PF08364 Bacterial translation initiation factor IF-2 associated region JWB56_15130 PF04760 Translation initiation factor IF-2, N-terminal region JWB56_15135 PF08529 NusA N-terminal domain JWB56_15135 PF00575 S1 RNA binding domain JWB56_15135 PF13184 NusA-like KH domain JWB56_15140 PF02576 RimP N-terminal domain JWB56_15140 PF17384 RimP C-terminal SH3 domain JWB56_15160 PF03840 Preprotein translocase SecG subunit JWB56_15165 PF00121 Triosephosphate isomerase JWB56_15170 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JWB56_15170 PF00437 Type II/IV secretion system protein JWB56_15175 PF00482 Type II secretion system (T2SS), protein F JWB56_15180 PF06750 Bacterial Peptidase A24 N-terminal domain JWB56_15180 PF01478 Type IV leader peptidase family JWB56_15185 PF01121 Dephospho-CoA kinase JWB56_15195 PF08032 RNA 2'-O ribose methyltransferase substrate binding JWB56_15195 PF00588 SpoU rRNA Methylase family JWB56_15200 PF06865 Pyrimidine/purine nucleoside phosphorylase JWB56_15210 PF02463 RecF/RecN/SMC N terminal domain JWB56_15215 PF02622 Uncharacterized ACR, COG1678 JWB56_15220 PF03652 Holliday junction resolvase JWB56_15225 PF13533 Biotin-lipoyl like JWB56_15250 PF12833 Helix-turn-helix domain JWB56_15250 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JWB56_15250 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JWB56_15250 PF02805 Metal binding domain of Ada JWB56_15255 PF01066 CDP-alcohol phosphatidyltransferase JWB56_15265 PF08459 UvrC Helix-hairpin-helix N-terminal JWB56_15265 PF01541 GIY-YIG catalytic domain JWB56_15265 PF02151 UvrB/uvrC motif JWB56_15285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JWB56_15285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JWB56_15285 PF00378 Enoyl-CoA hydratase/isomerase JWB56_15290 PF02803 Thiolase, C-terminal domain JWB56_15290 PF00108 Thiolase, N-terminal domain JWB56_15305 PF09278 MerR, DNA binding JWB56_15305 PF00376 MerR family regulatory protein JWB56_15315 PF01323 DSBA-like thioredoxin domain JWB56_15330 PF00183 Hsp90 protein JWB56_15330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_15370 PF05000 RNA polymerase Rpb1, domain 4 JWB56_15370 PF00623 RNA polymerase Rpb1, domain 2 JWB56_15370 PF04998 RNA polymerase Rpb1, domain 5 JWB56_15370 PF04997 RNA polymerase Rpb1, domain 1 JWB56_15370 PF04983 RNA polymerase Rpb1, domain 3 JWB56_15375 PF04563 RNA polymerase beta subunit JWB56_15375 PF04565 RNA polymerase Rpb2, domain 3 JWB56_15375 PF04561 RNA polymerase Rpb2, domain 2 JWB56_15375 PF10385 RNA polymerase beta subunit external 1 domain JWB56_15375 PF00562 RNA polymerase Rpb2, domain 6 JWB56_15375 PF04560 RNA polymerase Rpb2, domain 7 JWB56_15380 PF00542 Ribosomal protein L7/L12 C-terminal domain JWB56_15380 PF16320 Ribosomal protein L7/L12 dimerisation domain JWB56_15385 PF00466 Ribosomal protein L10 JWB56_15390 PF00687 Ribosomal protein L1p/L10e family JWB56_15395 PF03946 Ribosomal protein L11, N-terminal domain JWB56_15395 PF00298 Ribosomal protein L11, RNA binding domain JWB56_15400 PF00467 KOW motif JWB56_15400 PF02357 Transcription termination factor nusG JWB56_15405 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JWB56_15415 PF03143 Elongation factor Tu C-terminal domain JWB56_15415 PF00009 Elongation factor Tu GTP binding domain JWB56_15415 PF03144 Elongation factor Tu domain 2 JWB56_15440 PF00425 chorismate binding enzyme JWB56_15440 PF04715 Anthranilate synthase component I, N terminal region JWB56_15445 PF13419 Haloacid dehalogenase-like hydrolase JWB56_15450 PF00498 FHA domain JWB56_15450 PF12401 Protein of unknown function (DUF2662) JWB56_15455 PF03958 Bacterial type II/III secretion system short domain JWB56_15455 PF00263 Bacterial type II and III secretion system protein JWB56_15470 PF00816 H-NS histone family JWB56_15495 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JWB56_15495 PF03900 Porphobilinogen deaminase, C-terminal domain JWB56_15500 PF00072 Response regulator receiver domain JWB56_15500 PF04397 LytTr DNA-binding domain JWB56_15510 PF00206 Lyase JWB56_15510 PF14698 Argininosuccinate lyase C-terminal JWB56_15515 PF04362 Bacterial Fe(2+) trafficking JWB56_15520 PF01895 PhoU domain JWB56_15525 PF02321 Outer membrane efflux protein JWB56_15530 PF00892 EamA-like transporter family JWB56_15545 PF01964 Radical SAM ThiC family JWB56_15545 PF13667 ThiC-associated domain JWB56_15555 PF00149 Calcineurin-like phosphoesterase JWB56_15560 PF01258 Prokaryotic dksA/traR C4-type zinc finger JWB56_15565 PF00749 tRNA synthetases class I (E and Q), catalytic domain JWB56_15570 PF01098 Cell cycle protein JWB56_15575 PF02875 Mur ligase family, glutamate ligase domain JWB56_15575 PF08245 Mur ligase middle domain JWB56_15585 PF07670 Nucleoside recognition JWB56_15585 PF07664 Ferrous iron transport protein B C terminus JWB56_15585 PF02421 Ferrous iron transport protein B JWB56_15595 PF02899 Phage integrase, N-terminal SAM-like domain JWB56_15595 PF00589 Phage integrase family JWB56_15600 PF10411 Disulfide bond isomerase protein N-terminus JWB56_15600 PF13098 Thioredoxin-like domain JWB56_15605 PF03447 Homoserine dehydrogenase, NAD binding domain JWB56_15605 PF00742 Homoserine dehydrogenase JWB56_15605 PF01842 ACT domain JWB56_15610 PF00291 Pyridoxal-phosphate dependent enzyme JWB56_15615 PF00768 D-alanyl-D-alanine carboxypeptidase JWB56_15620 PF00072 Response regulator receiver domain JWB56_15620 PF00196 Bacterial regulatory proteins, luxR family JWB56_15625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_15625 PF00512 His Kinase A (phospho-acceptor) domain JWB56_15630 PF02954 Bacterial regulatory protein, Fis family JWB56_15630 PF00158 Sigma-54 interaction domain JWB56_15630 PF00072 Response regulator receiver domain JWB56_15635 PF03572 Peptidase family S41 JWB56_15635 PF00595 PDZ domain JWB56_15640 PF01676 Metalloenzyme superfamily JWB56_15640 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JWB56_15645 PF03739 Lipopolysaccharide export system permease LptF/LptG JWB56_15655 PF00883 Cytosol aminopeptidase family, catalytic domain JWB56_15655 PF02789 Cytosol aminopeptidase family, N-terminal domain JWB56_15675 PF00677 Lumazine binding domain JWB56_15685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JWB56_15685 PF01872 RibD C-terminal domain JWB56_15690 PF03477 ATP cone domain JWB56_15695 PF00909 Ammonium Transporter Family JWB56_15700 PF00543 Nitrogen regulatory protein P-II JWB56_15710 PF13335 Magnesium chelatase, subunit ChlI C-terminal JWB56_15710 PF01078 Magnesium chelatase, subunit ChlI JWB56_15720 PF00916 Sulfate permease family JWB56_15720 PF01740 STAS domain JWB56_15735 PF01252 Signal peptidase (SPase) II JWB56_15745 PF13411 MerR HTH family regulatory protein JWB56_15750 PF00582 Universal stress protein family JWB56_15755 PF03960 ArsC family JWB56_15760 PF01022 Bacterial regulatory protein, arsR family JWB56_15770 PF01758 Sodium Bile acid symporter family JWB56_15775 PF03358 NADPH-dependent FMN reductase JWB56_15780 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_15805 PF00665 Integrase core domain JWB56_15815 PF13335 Magnesium chelatase, subunit ChlI C-terminal JWB56_15815 PF01078 Magnesium chelatase, subunit ChlI JWB56_15820 PF00392 Bacterial regulatory proteins, gntR family JWB56_15820 PF00155 Aminotransferase class I and II JWB56_15830 PF00701 Dihydrodipicolinate synthetase family JWB56_15840 PF03573 outer membrane porin, OprD family JWB56_15845 PF00719 Inorganic pyrophosphatase JWB56_15860 PF13193 AMP-binding enzyme C-terminal domain JWB56_15860 PF00501 AMP-binding enzyme JWB56_15865 PF03989 DNA gyrase C-terminal domain, beta-propeller JWB56_15865 PF00521 DNA gyrase/topoisomerase IV, subunit A JWB56_15870 PF07690 Major Facilitator Superfamily JWB56_15875 PF03458 UPF0126 domain JWB56_15880 PF02810 SEC-C motif JWB56_15885 PF03471 Transporter associated domain JWB56_15885 PF03741 Integral membrane protein TerC family JWB56_15890 PF03641 Possible lysine decarboxylase JWB56_15895 PF07690 Major Facilitator Superfamily JWB56_15905 PF00817 impB/mucB/samB family JWB56_15905 PF11799 impB/mucB/samB family C-terminal domain JWB56_15905 PF11798 IMS family HHH motif JWB56_15920 PF04055 Radical SAM superfamily JWB56_15920 PF11842 Domain of unknown function (DUF3362) JWB56_15920 PF08497 Radical SAM N-terminal JWB56_15940 PF03358 NADPH-dependent FMN reductase JWB56_15950 PF00291 Pyridoxal-phosphate dependent enzyme JWB56_15985 PF00440 Bacterial regulatory proteins, tetR family JWB56_16010 PF01327 Polypeptide deformylase JWB56_16020 PF02481 DNA recombination-mediator protein A JWB56_16020 PF17782 DprA winged helix domain JWB56_16025 PF01300 Telomere recombination JWB56_16030 PF00892 EamA-like transporter family JWB56_16035 PF00440 Bacterial regulatory proteins, tetR family JWB56_16040 PF07690 Major Facilitator Superfamily JWB56_16050 PF00255 Glutathione peroxidase JWB56_16060 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JWB56_16065 PF02874 ATP synthase alpha/beta family, beta-barrel domain JWB56_16065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JWB56_16070 PF00231 ATP synthase JWB56_16075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JWB56_16075 PF00306 ATP synthase alpha/beta chain, C terminal domain JWB56_16075 PF02874 ATP synthase alpha/beta family, beta-barrel domain JWB56_16080 PF00213 ATP synthase delta (OSCP) subunit JWB56_16085 PF00430 ATP synthase B/B' CF(0) JWB56_16090 PF00137 ATP synthase subunit C JWB56_16095 PF00119 ATP synthase A chain JWB56_16115 PF00005 ABC transporter JWB56_16120 PF00950 ABC 3 transport family JWB56_16125 PF01810 LysE type translocator JWB56_16130 PF04261 Dyp-type peroxidase family JWB56_16135 PF03949 Malic enzyme, NAD binding domain JWB56_16135 PF00390 Malic enzyme, N-terminal domain JWB56_16140 PF03485 Arginyl tRNA synthetase N terminal domain JWB56_16140 PF00750 tRNA synthetases class I (R) JWB56_16140 PF05746 DALR anticodon binding domain JWB56_16160 PF05726 Pirin C-terminal cupin domain JWB56_16160 PF02678 Pirin JWB56_16170 PF03551 Transcriptional regulator PadR-like family JWB56_16175 PF01909 Nucleotidyltransferase domain JWB56_16175 PF13427 Domain of unknown function (DUF4111) JWB56_16180 PF02540 NAD synthase JWB56_16180 PF00958 GMP synthase C terminal domain JWB56_16180 PF00117 Glutamine amidotransferase class-I JWB56_16185 PF04286 Protein of unknown function (DUF445) JWB56_16190 PF07681 DoxX JWB56_16195 PF09335 SNARE associated Golgi protein JWB56_16210 PF13614 AAA domain JWB56_16220 PF01722 BolA-like protein JWB56_16235 PF01648 4'-phosphopantetheinyl transferase superfamily JWB56_16240 PF12697 Alpha/beta hydrolase family JWB56_16255 PF13193 AMP-binding enzyme C-terminal domain JWB56_16255 PF00668 Condensation domain JWB56_16255 PF00550 Phosphopantetheine attachment site JWB56_16255 PF00975 Thioesterase domain JWB56_16255 PF00501 AMP-binding enzyme JWB56_16260 PF00975 Thioesterase domain JWB56_16260 PF02801 Beta-ketoacyl synthase, C-terminal domain JWB56_16260 PF14765 Polyketide synthase dehydratase JWB56_16260 PF00550 Phosphopantetheine attachment site JWB56_16260 PF08242 Methyltransferase domain JWB56_16260 PF16197 Ketoacyl-synthetase C-terminal extension JWB56_16260 PF00109 Beta-ketoacyl synthase, N-terminal domain JWB56_16265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_16265 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_16265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_16270 PF00501 AMP-binding enzyme JWB56_16275 PF03472 Autoinducer binding domain JWB56_16275 PF00196 Bacterial regulatory proteins, luxR family JWB56_16285 PF00765 Autoinducer synthase JWB56_16290 PF00083 Sugar (and other) transporter JWB56_16290 PF07690 Major Facilitator Superfamily JWB56_16295 PF00378 Enoyl-CoA hydratase/isomerase JWB56_16300 PF00378 Enoyl-CoA hydratase/isomerase JWB56_16305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_16305 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_16305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_16310 PF13193 AMP-binding enzyme C-terminal domain JWB56_16310 PF00501 AMP-binding enzyme JWB56_16315 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JWB56_16315 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JWB56_16320 PF00171 Aldehyde dehydrogenase family JWB56_16330 PF00324 Amino acid permease JWB56_16335 PF00324 Amino acid permease JWB56_16340 PF01042 Endoribonuclease L-PSP JWB56_16345 PF00842 Alanine racemase, C-terminal domain JWB56_16345 PF01168 Alanine racemase, N-terminal domain JWB56_16350 PF01266 FAD dependent oxidoreductase JWB56_16355 PF01037 Lrp/AsnC ligand binding domain JWB56_16365 PF00593 TonB dependent receptor JWB56_16365 PF07715 TonB-dependent Receptor Plug Domain JWB56_16380 PF00849 RNA pseudouridylate synthase JWB56_16405 PF13737 Transposase DDE domain JWB56_16425 PF00330 Aconitase family (aconitate hydratase) JWB56_16425 PF00694 Aconitase C-terminal domain JWB56_16430 PF00285 Citrate synthase, C-terminal domain JWB56_16440 PF00392 Bacterial regulatory proteins, gntR family JWB56_16440 PF07729 FCD domain JWB56_16450 PF00155 Aminotransferase class I and II JWB56_16455 PF01565 FAD binding domain JWB56_16455 PF09330 D-lactate dehydrogenase, membrane binding JWB56_16460 PF01070 FMN-dependent dehydrogenase JWB56_16465 PF07729 FCD domain JWB56_16465 PF00392 Bacterial regulatory proteins, gntR family JWB56_16470 PF02652 L-lactate permease JWB56_16475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JWB56_16475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JWB56_16475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JWB56_16475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JWB56_16480 PF16363 GDP-mannose 4,6 dehydratase JWB56_16485 PF00342 Phosphoglucose isomerase JWB56_16490 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JWB56_16490 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JWB56_16490 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JWB56_16495 PF00483 Nucleotidyl transferase JWB56_16500 PF02719 Polysaccharide biosynthesis protein JWB56_16505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JWB56_16510 PF00132 Bacterial transferase hexapeptide (six repeats) JWB56_16510 PF17836 PglD N-terminal domain JWB56_16510 PF14602 Hexapeptide repeat of succinyl-transferase JWB56_16515 PF02397 Bacterial sugar transferase JWB56_16540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JWB56_16540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JWB56_16540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JWB56_16545 PF02350 UDP-N-acetylglucosamine 2-epimerase JWB56_16550 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JWB56_16550 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JWB56_16550 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JWB56_16555 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JWB56_16555 PF10531 SLBB domain JWB56_16555 PF02563 Polysaccharide biosynthesis/export protein JWB56_16560 PF01451 Low molecular weight phosphotyrosine protein phosphatase JWB56_16565 PF13614 AAA domain JWB56_16565 PF02706 Chain length determinant protein JWB56_16565 PF13807 G-rich domain on putative tyrosine kinase JWB56_16570 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JWB56_16570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JWB56_16575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JWB56_16575 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JWB56_16580 PF03023 Lipid II flippase MurJ JWB56_16585 PF01510 N-acetylmuramoyl-L-alanine amidase JWB56_16590 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JWB56_16590 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JWB56_16600 PF05506 Domain of unknown function (DUF756) JWB56_16600 PF04185 Phosphoesterase family JWB56_16605 PF01138 3' exoribonuclease family, domain 1 JWB56_16605 PF03725 3' exoribonuclease family, domain 2 JWB56_16610 PF00487 Fatty acid desaturase JWB56_16615 PF00175 Oxidoreductase NAD-binding domain JWB56_16620 PF00440 Bacterial regulatory proteins, tetR family JWB56_16625 PF08360 QacR-like protein, C-terminal region JWB56_16625 PF00440 Bacterial regulatory proteins, tetR family JWB56_16630 PF01323 DSBA-like thioredoxin domain JWB56_16640 PF13419 Haloacid dehalogenase-like hydrolase JWB56_16645 PF00106 short chain dehydrogenase JWB56_16660 PF00696 Amino acid kinase family JWB56_16660 PF00583 Acetyltransferase (GNAT) family JWB56_16665 PF09084 NMT1/THI5 like JWB56_16670 PF09084 NMT1/THI5 like JWB56_16675 PF00296 Luciferase-like monooxygenase JWB56_16680 PF00528 Binding-protein-dependent transport system inner membrane component JWB56_16685 PF00005 ABC transporter JWB56_16690 PF00440 Bacterial regulatory proteins, tetR family JWB56_16690 PF08362 YcdC-like protein, C-terminal region JWB56_16695 PF01048 Phosphorylase superfamily JWB56_16705 PF01687 Riboflavin kinase JWB56_16705 PF06574 FAD synthetase JWB56_16710 PF08264 Anticodon-binding domain of tRNA JWB56_16710 PF06827 Zinc finger found in FPG and IleRS JWB56_16710 PF00133 tRNA synthetases class I (I, L, M and V) JWB56_16715 PF01252 Signal peptidase (SPase) II JWB56_16720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JWB56_16760 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JWB56_16765 PF07859 alpha/beta hydrolase fold JWB56_16790 PF01025 GrpE JWB56_16795 PF00012 Hsp70 protein JWB56_16815 PF13406 Transglycosylase SLT domain JWB56_16820 PF02222 ATP-grasp domain JWB56_16820 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JWB56_16825 PF00731 AIR carboxylase JWB56_16835 PF08245 Mur ligase middle domain JWB56_16835 PF02875 Mur ligase family, glutamate ligase domain JWB56_16835 PF01225 Mur ligase family, catalytic domain JWB56_16845 PF01569 PAP2 superfamily JWB56_16850 PF03741 Integral membrane protein TerC family JWB56_16860 PF03738 Glutathionylspermidine synthase preATP-grasp JWB56_16865 PF00355 Rieske [2Fe-2S] domain JWB56_16870 PF01979 Amidohydrolase family JWB56_16875 PF00156 Phosphoribosyl transferase domain JWB56_16885 PF10411 Disulfide bond isomerase protein N-terminus JWB56_16885 PF13098 Thioredoxin-like domain JWB56_16890 PF01545 Cation efflux family JWB56_16890 PF16916 Dimerisation domain of Zinc Transporter JWB56_16895 PF02583 Metal-sensitive transcriptional repressor JWB56_16900 PF01926 50S ribosome-binding GTPase JWB56_16900 PF12631 MnmE helical domain JWB56_16900 PF10396 GTP-binding protein TrmE N-terminus JWB56_16905 PF02096 60Kd inner membrane protein JWB56_16905 PF14849 YidC periplasmic domain JWB56_16910 PF01809 Putative membrane protein insertion efficiency factor JWB56_16915 PF00825 Ribonuclease P JWB56_16920 PF00468 Ribosomal protein L34 JWB56_16925 PF00308 Bacterial dnaA protein JWB56_16925 PF08299 Bacterial dnaA protein helix-turn-helix JWB56_16925 PF11638 DnaA N-terminal domain JWB56_16930 PF02768 DNA polymerase III beta subunit, C-terminal domain JWB56_16930 PF02767 DNA polymerase III beta subunit, central domain JWB56_16930 PF00712 DNA polymerase III beta subunit, N-terminal domain JWB56_16935 PF02463 RecF/RecN/SMC N terminal domain JWB56_16940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_16940 PF01751 Toprim domain JWB56_16940 PF00204 DNA gyrase B JWB56_16940 PF18053 DNA gyrase B subunit insert domain JWB56_16940 PF00986 DNA gyrase B subunit, carboxyl terminus JWB56_16950 PF09335 SNARE associated Golgi protein JWB56_16955 PF12848 ABC transporter JWB56_16955 PF00005 ABC transporter JWB56_16975 PF01521 Iron-sulphur cluster biosynthesis JWB56_16980 PF00561 alpha/beta hydrolase fold JWB56_16985 PF03702 Anhydro-N-acetylmuramic acid kinase JWB56_16990 PF00579 tRNA synthetases class I (W and Y) JWB56_17030 PF00209 Sodium:neurotransmitter symporter family JWB56_17040 PF01189 16S rRNA methyltransferase RsmB/F JWB56_17040 PF01029 NusB family JWB56_17045 PF00551 Formyl transferase JWB56_17045 PF02911 Formyl transferase, C-terminal domain JWB56_17050 PF00920 Dehydratase family JWB56_17065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_17065 PF03466 LysR substrate binding domain JWB56_17070 PF00860 Permease family JWB56_17075 PF00311 Phosphoenolpyruvate carboxylase JWB56_17080 PF00440 Bacterial regulatory proteins, tetR family JWB56_17080 PF08361 MAATS-type transcriptional repressor, C-terminal region JWB56_17085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JWB56_17090 PF00873 AcrB/AcrD/AcrF family JWB56_17100 PF01556 DnaJ C terminal domain JWB56_17100 PF00226 DnaJ domain JWB56_17100 PF00684 DnaJ central domain JWB56_17110 PF05173 Dihydrodipicolinate reductase, C-terminus JWB56_17110 PF01113 Dihydrodipicolinate reductase, N-terminus JWB56_17120 PF07690 Major Facilitator Superfamily JWB56_17125 PF00248 Aldo/keto reductase family JWB56_17130 PF03466 LysR substrate binding domain JWB56_17130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_17145 PF00155 Aminotransferase class I and II JWB56_17145 PF00392 Bacterial regulatory proteins, gntR family JWB56_17150 PF08240 Alcohol dehydrogenase GroES-like domain JWB56_17150 PF00107 Zinc-binding dehydrogenase JWB56_17155 PF03352 Methyladenine glycosylase JWB56_17170 PF14815 NUDIX domain JWB56_17170 PF00730 HhH-GPD superfamily base excision DNA repair protein JWB56_17170 PF00633 Helix-hairpin-helix motif JWB56_17170 PF10576 Iron-sulfur binding domain of endonuclease III JWB56_17185 PF07043 Protein of unknown function (DUF1328) JWB56_17190 PF03692 Putative zinc- or iron-chelating domain JWB56_17195 PF07995 Glucose / Sorbosone dehydrogenase JWB56_17200 PF12002 MgsA AAA+ ATPase C terminal JWB56_17200 PF16193 AAA C-terminal domain JWB56_17200 PF00004 ATPase family associated with various cellular activities (AAA) JWB56_17205 PF01226 Formate/nitrite transporter JWB56_17215 PF01259 SAICAR synthetase JWB56_17225 PF00701 Dihydrodipicolinate synthetase family JWB56_17230 PF00857 Isochorismatase family JWB56_17235 PF01758 Sodium Bile acid symporter family JWB56_17240 PF01554 MatE JWB56_17245 PF04463 Protein of unknown function (DUF523) JWB56_17250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JWB56_17260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JWB56_17265 PF02798 Glutathione S-transferase, N-terminal domain JWB56_17265 PF14497 Glutathione S-transferase, C-terminal domain JWB56_17275 PF00324 Amino acid permease JWB56_17285 PF07683 Cobalamin synthesis protein cobW C-terminal domain JWB56_17285 PF02492 CobW/HypB/UreG, nucleotide-binding domain JWB56_17295 PF00392 Bacterial regulatory proteins, gntR family JWB56_17295 PF07702 UTRA domain JWB56_17300 PF05962 HutD JWB56_17305 PF17392 Urocanase C-terminal domain JWB56_17305 PF17391 Urocanase N-terminal domain JWB56_17305 PF01175 Urocanase Rossmann-like domain JWB56_17310 PF00221 Aromatic amino acid lyase JWB56_17315 PF00324 Amino acid permease JWB56_17320 PF01979 Amidohydrolase family JWB56_17325 PF00491 Arginase family JWB56_17340 PF01177 Asp/Glu/Hydantoin racemase JWB56_17350 PF00145 C-5 cytosine-specific DNA methylase JWB56_17370 PF01380 SIS domain JWB56_17375 PF00132 Bacterial transferase hexapeptide (six repeats) JWB56_17375 PF12804 MobA-like NTP transferase domain JWB56_17375 PF14602 Hexapeptide repeat of succinyl-transferase JWB56_17380 PF04608 Phosphatidylglycerophosphatase A JWB56_17385 PF02769 AIR synthase related protein, C-terminal domain JWB56_17385 PF00586 AIR synthase related protein, N-terminal domain JWB56_17390 PF01029 NusB family JWB56_17395 PF00885 6,7-dimethyl-8-ribityllumazine synthase JWB56_17400 PF00925 GTP cyclohydrolase II JWB56_17400 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JWB56_17425 PF02580 D-Tyr-tRNA(Tyr) deacylase JWB56_17430 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JWB56_17430 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JWB56_17435 PF00581 Rhodanese-like domain JWB56_17440 PF02666 Phosphatidylserine decarboxylase JWB56_17450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_17450 PF11808 Phosphate regulon sensor protein PhoR JWB56_17450 PF00989 PAS fold JWB56_17450 PF00512 His Kinase A (phospho-acceptor) domain JWB56_17455 PF00486 Transcriptional regulatory protein, C terminal JWB56_17455 PF00072 Response regulator receiver domain JWB56_17465 PF00106 short chain dehydrogenase JWB56_17470 PF01554 MatE JWB56_17475 PF00155 Aminotransferase class I and II JWB56_17480 PF04286 Protein of unknown function (DUF445) JWB56_17495 PF04262 Glutamate-cysteine ligase JWB56_17500 PF02600 Disulfide bond formation protein DsbB JWB56_17505 PF13296 Putative type VI secretion system Rhs element Vgr JWB56_17505 PF04717 Type VI secretion system, phage-baseplate injector JWB56_17505 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JWB56_17540 PF05728 Uncharacterised protein family (UPF0227) JWB56_17545 PF01751 Toprim domain JWB56_17545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_17545 PF00986 DNA gyrase B subunit, carboxyl terminus JWB56_17545 PF00204 DNA gyrase B JWB56_17550 PF04115 Ureidoglycolate lyase JWB56_17555 PF03561 Allantoicase repeat JWB56_17560 PF01494 FAD binding domain JWB56_17570 PF00860 Permease family JWB56_17575 PF00576 HIUase/Transthyretin family JWB56_17605 PF02683 Cytochrome C biogenesis protein transmembrane region JWB56_17605 PF11412 Disulphide bond corrector protein DsbC JWB56_17610 PF00990 Diguanylate cyclase, GGDEF domain JWB56_17610 PF07694 5TMR of 5TMR-LYT JWB56_17615 PF07859 alpha/beta hydrolase fold JWB56_17625 PF03960 ArsC family JWB56_17630 PF03372 Endonuclease/Exonuclease/phosphatase family JWB56_17635 PF00156 Phosphoribosyl transferase domain JWB56_17640 PF00593 TonB dependent receptor JWB56_17640 PF07715 TonB-dependent Receptor Plug Domain JWB56_17650 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JWB56_17650 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JWB56_17655 PF04101 Glycosyltransferase family 28 C-terminal domain JWB56_17655 PF03033 Glycosyltransferase family 28 N-terminal domain JWB56_17660 PF01225 Mur ligase family, catalytic domain JWB56_17660 PF02875 Mur ligase family, glutamate ligase domain JWB56_17660 PF08245 Mur ligase middle domain JWB56_17665 PF01820 D-ala D-ala ligase N-terminus JWB56_17665 PF07478 D-ala D-ala ligase C-terminus JWB56_17670 PF08478 POTRA domain, FtsQ-type JWB56_17670 PF03799 Cell division protein FtsQ JWB56_17675 PF02491 SHS2 domain inserted in FTSA JWB56_17680 PF12327 FtsZ family, C-terminal domain JWB56_17680 PF00091 Tubulin/FtsZ family, GTPase domain JWB56_17685 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JWB56_17695 PF01551 Peptidase family M23 JWB56_17700 PF17831 Pyruvate dehydrogenase E1 component middle domain JWB56_17700 PF00456 Transketolase, thiamine diphosphate binding domain JWB56_17705 PF00364 Biotin-requiring enzyme JWB56_17705 PF02817 e3 binding domain JWB56_17705 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JWB56_17715 PF01169 Uncharacterized protein family UPF0016 JWB56_17720 PF00593 TonB dependent receptor JWB56_17720 PF07715 TonB-dependent Receptor Plug Domain JWB56_17725 PF01613 Flavin reductase like domain JWB56_17725 PF00258 Flavodoxin JWB56_17730 PF03692 Putative zinc- or iron-chelating domain JWB56_17735 PF00478 IMP dehydrogenase / GMP reductase domain JWB56_17735 PF00571 CBS domain JWB56_17740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JWB56_17740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JWB56_17740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JWB56_17740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JWB56_17745 PF01243 Pyridoxamine 5'-phosphate oxidase JWB56_17745 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JWB56_17750 PF17768 RecJ OB domain JWB56_17750 PF01368 DHH family JWB56_17750 PF02272 DHHA1 domain JWB56_17770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JWB56_17775 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JWB56_17780 PF04452 RNA methyltransferase JWB56_17785 PF00924 Mechanosensitive ion channel JWB56_17795 PF00501 AMP-binding enzyme JWB56_17795 PF13193 AMP-binding enzyme C-terminal domain JWB56_17795 PF16177 Acetyl-coenzyme A synthetase N-terminus JWB56_17800 PF00857 Isochorismatase family JWB56_17805 PF01037 Lrp/AsnC ligand binding domain JWB56_17810 PF00296 Luciferase-like monooxygenase JWB56_17815 PF03358 NADPH-dependent FMN reductase JWB56_17820 PF00072 Response regulator receiver domain JWB56_17820 PF00196 Bacterial regulatory proteins, luxR family JWB56_17830 PF00672 HAMP domain JWB56_17830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_17830 PF00072 Response regulator receiver domain JWB56_17830 PF00512 His Kinase A (phospho-acceptor) domain JWB56_17830 PF01627 Hpt domain JWB56_17835 PF04341 Protein of unknown function, DUF485 JWB56_17840 PF00474 Sodium:solute symporter family JWB56_17850 PF02028 BCCT, betaine/carnitine/choline family transporter JWB56_17860 PF00990 Diguanylate cyclase, GGDEF domain JWB56_17865 PF00005 ABC transporter JWB56_17865 PF17755 UvrA DNA-binding domain JWB56_17865 PF17760 UvrA interaction domain JWB56_17870 PF00440 Bacterial regulatory proteins, tetR family JWB56_17870 PF16925 Tetracyclin repressor-like, C-terminal domain JWB56_17875 PF08240 Alcohol dehydrogenase GroES-like domain JWB56_17875 PF00107 Zinc-binding dehydrogenase JWB56_17885 PF06942 GlpM protein JWB56_17890 PF02581 Thiamine monophosphate synthase JWB56_17890 PF03070 TENA/THI-4/PQQC family JWB56_17890 PF08543 Phosphomethylpyrimidine kinase JWB56_17900 PF07690 Major Facilitator Superfamily JWB56_17905 PF00436 Single-strand binding protein family JWB56_17915 PF03591 AzlC protein JWB56_17925 PF00324 Amino acid permease JWB56_17930 PF00155 Aminotransferase class I and II JWB56_17930 PF00392 Bacterial regulatory proteins, gntR family JWB56_17935 PF00202 Aminotransferase class-III JWB56_17940 PF00171 Aldehyde dehydrogenase family JWB56_17945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_17950 PF00857 Isochorismatase family JWB56_17955 PF05726 Pirin C-terminal cupin domain JWB56_17955 PF02678 Pirin JWB56_17960 PF01593 Flavin containing amine oxidoreductase JWB56_17980 PF07690 Major Facilitator Superfamily JWB56_17985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_17985 PF03466 LysR substrate binding domain JWB56_18005 PF00248 Aldo/keto reductase family JWB56_18010 PF12833 Helix-turn-helix domain JWB56_18010 PF02311 AraC-like ligand binding domain JWB56_18025 PF01638 HxlR-like helix-turn-helix JWB56_18035 PF01638 HxlR-like helix-turn-helix JWB56_18040 PF02525 Flavodoxin-like fold JWB56_18050 PF13302 Acetyltransferase (GNAT) domain JWB56_18060 PF02705 K+ potassium transporter JWB56_18090 PF00230 Major intrinsic protein JWB56_18105 PF00977 Histidine biosynthesis protein JWB56_18110 PF01636 Phosphotransferase enzyme family JWB56_18135 PF00977 Histidine biosynthesis protein JWB56_18150 PF00117 Glutamine amidotransferase class-I JWB56_18155 PF00475 Imidazoleglycerol-phosphate dehydratase JWB56_18175 PF00583 Acetyltransferase (GNAT) family JWB56_18180 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JWB56_18180 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JWB56_18190 PF00672 HAMP domain JWB56_18190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JWB56_18190 PF00512 His Kinase A (phospho-acceptor) domain JWB56_18195 PF00072 Response regulator receiver domain JWB56_18195 PF00486 Transcriptional regulatory protein, C terminal JWB56_18200 PF00575 S1 RNA binding domain JWB56_18200 PF17674 HHH domain JWB56_18200 PF09371 Tex-like protein N-terminal domain JWB56_18200 PF16921 Tex protein YqgF-like domain JWB56_18205 PF00916 Sulfate permease family JWB56_18205 PF01740 STAS domain JWB56_18210 PF00106 short chain dehydrogenase JWB56_18215 PF01053 Cys/Met metabolism PLP-dependent enzyme JWB56_18220 PF00005 ABC transporter JWB56_18220 PF12848 ABC transporter JWB56_18245 PF00529 HlyD membrane-fusion protein of T1SS JWB56_18245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JWB56_18250 PF00873 AcrB/AcrD/AcrF family JWB56_18255 PF01545 Cation efflux family JWB56_18285 PF00324 Amino acid permease JWB56_18300 PF00749 tRNA synthetases class I (E and Q), catalytic domain JWB56_18315 PF01795 MraW methylase family JWB56_18325 PF03717 Penicillin-binding Protein dimerisation domain JWB56_18325 PF00905 Penicillin binding protein transpeptidase domain JWB56_18330 PF02875 Mur ligase family, glutamate ligase domain JWB56_18330 PF08245 Mur ligase middle domain JWB56_18330 PF01225 Mur ligase family, catalytic domain JWB56_18335 PF08245 Mur ligase middle domain JWB56_18335 PF02875 Mur ligase family, glutamate ligase domain JWB56_18335 PF01225 Mur ligase family, catalytic domain JWB56_18340 PF00953 Glycosyl transferase family 4 JWB56_18350 PF13847 Methyltransferase domain JWB56_18355 PF00905 Penicillin binding protein transpeptidase domain JWB56_18355 PF00912 Transglycosylase JWB56_18355 PF17092 Penicillin-binding protein OB-like domain JWB56_18360 PF11104 Type IV pilus assembly protein PilM; JWB56_18365 PF05137 Fimbrial assembly protein (PilN) JWB56_18370 PF04350 Pilus assembly protein, PilO JWB56_18380 PF11741 AMIN domain JWB56_18380 PF00263 Bacterial type II and III secretion system protein JWB56_18380 PF03958 Bacterial type II/III secretion system short domain JWB56_18380 PF07660 Secretin and TonB N terminus short domain JWB56_18385 PF01202 Shikimate kinase JWB56_18390 PF01761 3-dehydroquinate synthase JWB56_18400 PF01493 GXGXG motif JWB56_18400 PF04898 Glutamate synthase central domain JWB56_18400 PF01645 Conserved region in glutamate synthase JWB56_18400 PF00310 Glutamine amidotransferases class-II JWB56_18405 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JWB56_18405 PF07992 Pyridine nucleotide-disulphide oxidoreductase JWB56_18415 PF04011 LemA family JWB56_18420 PF04536 TPM domain JWB56_18430 PF07963 Prokaryotic N-terminal methylation motif JWB56_18430 PF00114 Pilin (bacterial filament) JWB56_18435 PF15864 Protein glycosylation ligase JWB56_18435 PF04932 O-Antigen ligase JWB56_18435 PF11846 Virulence factor membrane-bound polymerase, C-terminal JWB56_18440 PF00210 Ferritin-like domain JWB56_18445 PF04324 BFD-like [2Fe-2S] binding domain JWB56_18450 PF01042 Endoribonuclease L-PSP JWB56_18455 PF13291 ACT domain JWB56_18455 PF04607 Region found in RelA / SpoT proteins JWB56_18455 PF02824 TGS domain JWB56_18465 PF01192 RNA polymerase Rpb6 JWB56_18470 PF00625 Guanylate kinase JWB56_18475 PF02401 LytB protein JWB56_18515 PF00886 Ribosomal protein S16 JWB56_18520 PF05239 PRC-barrel domain JWB56_18520 PF01782 RimM N-terminal domain JWB56_18525 PF01746 tRNA (Guanine-1)-methyltransferase JWB56_18530 PF01245 Ribosomal protein L19 JWB56_18535 PF00561 alpha/beta hydrolase fold JWB56_18540 PF03280 Proteobacterial lipase chaperone protein JWB56_18545 PF09157 Pseudouridine synthase II TruB, C-terminal JWB56_18545 PF01509 TruB family pseudouridylate synthase (N terminal domain) JWB56_18545 PF16198 tRNA pseudouridylate synthase B C-terminal domain JWB56_18550 PF01925 Sulfite exporter TauE/SafE JWB56_18560 PF00892 EamA-like transporter family JWB56_18565 PF00892 EamA-like transporter family JWB56_18570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JWB56_18570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JWB56_18575 PF01565 FAD binding domain JWB56_18575 PF02913 FAD linked oxidases, C-terminal domain JWB56_18585 PF03992 Antibiotic biosynthesis monooxygenase JWB56_18590 PF02525 Flavodoxin-like fold JWB56_18600 PF07690 Major Facilitator Superfamily JWB56_18605 PF12805 FUSC-like inner membrane protein yccS JWB56_18610 PF00080 Copper/zinc superoxide dismutase (SODC) JWB56_18615 PF01594 AI-2E family transporter JWB56_18620 PF13614 AAA domain JWB56_18640 PF08241 Methyltransferase domain JWB56_18650 PF00324 Amino acid permease JWB56_18655 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JWB56_18655 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JWB56_18660 PF00202 Aminotransferase class-III JWB56_18665 PF04958 Arginine N-succinyltransferase beta subunit JWB56_18670 PF00171 Aldehyde dehydrogenase family JWB56_18675 PF04996 Succinylarginine dihydrolase JWB56_18680 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JWB56_18695 PF05922 Peptidase inhibitor I9 JWB56_18695 PF00082 Subtilase family JWB56_18710 PF03466 LysR substrate binding domain JWB56_18710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JWB56_18715 PF00892 EamA-like transporter family JWB56_18730 PF02092 Glycyl-tRNA synthetase beta subunit JWB56_18730 PF05746 DALR anticodon binding domain JWB56_18735 PF02091 Glycyl-tRNA synthetase alpha subunit JWB56_18740 PF07690 Major Facilitator Superfamily JWB56_18755 PF00571 CBS domain JWB56_18760 PF04024 PspC domain JWB56_18770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_18770 PF12806 Acetyl-CoA dehydrogenase C-terminal like JWB56_18770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_18770 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_18780 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JWB56_18780 PF01488 Shikimate / quinate 5-dehydrogenase JWB56_18780 PF08501 Shikimate dehydrogenase substrate binding domain JWB56_18785 PF01218 Coproporphyrinogen III oxidase JWB56_18790 PF00925 GTP cyclohydrolase II JWB56_18795 PF02780 Transketolase, C-terminal domain JWB56_18795 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JWB56_18795 PF02779 Transketolase, pyrimidine binding domain JWB56_18800 PF00459 Inositol monophosphatase family JWB56_18805 PF00271 Helicase conserved C-terminal domain JWB56_18805 PF03880 DbpA RNA binding domain JWB56_18805 PF12343 Cold shock protein DEAD box A JWB56_18805 PF00270 DEAD/DEAH box helicase JWB56_18815 PF00005 ABC transporter JWB56_18820 PF02405 Permease MlaE JWB56_18830 PF05494 MlaC protein JWB56_18840 PF01544 CorA-like Mg2+ transporter protein JWB56_18845 PF03641 Possible lysine decarboxylase JWB56_18850 PF00293 NUDIX domain JWB56_18855 PF00156 Phosphoribosyl transferase domain JWB56_18860 PF17191 RecG wedge domain JWB56_18860 PF00271 Helicase conserved C-terminal domain JWB56_18860 PF00270 DEAD/DEAH box helicase JWB56_18875 PF01553 Acyltransferase JWB56_18885 PF00375 Sodium:dicarboxylate symporter family JWB56_18895 PF01926 50S ribosome-binding GTPase JWB56_18900 PF02082 Transcriptional regulator JWB56_18905 PF00175 Oxidoreductase NAD-binding domain JWB56_18905 PF00042 Globin JWB56_18905 PF00970 Oxidoreductase FAD-binding domain JWB56_18910 PF05872 Bacterial protein of unknown function (DUF853) JWB56_18915 PF01053 Cys/Met metabolism PLP-dependent enzyme JWB56_18920 PF00117 Glutamine amidotransferase class-I JWB56_18925 PF00338 Ribosomal protein S10p/S20e JWB56_18930 PF00297 Ribosomal protein L3 JWB56_18935 PF00573 Ribosomal protein L4/L1 family JWB56_18940 PF00276 Ribosomal protein L23 JWB56_18945 PF03947 Ribosomal Proteins L2, C-terminal domain JWB56_18945 PF00181 Ribosomal Proteins L2, RNA binding domain JWB56_18950 PF00203 Ribosomal protein S19 JWB56_18955 PF00237 Ribosomal protein L22p/L17e JWB56_18960 PF07650 KH domain JWB56_18960 PF00189 Ribosomal protein S3, C-terminal domain JWB56_18965 PF00252 Ribosomal protein L16p/L10e JWB56_18970 PF00831 Ribosomal L29 protein JWB56_18975 PF00366 Ribosomal protein S17 JWB56_18980 PF00238 Ribosomal protein L14p/L23e JWB56_18985 PF00467 KOW motif JWB56_18985 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JWB56_18990 PF00673 ribosomal L5P family C-terminus JWB56_18990 PF00281 Ribosomal protein L5 JWB56_18995 PF00253 Ribosomal protein S14p/S29e JWB56_19000 PF00410 Ribosomal protein S8 JWB56_19005 PF00347 Ribosomal protein L6 JWB56_19010 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JWB56_19015 PF03719 Ribosomal protein S5, C-terminal domain JWB56_19015 PF00333 Ribosomal protein S5, N-terminal domain JWB56_19020 PF00327 Ribosomal protein L30p/L7e JWB56_19025 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JWB56_19030 PF00344 SecY translocase JWB56_19035 PF00444 Ribosomal protein L36 JWB56_19040 PF00416 Ribosomal protein S13/S18 JWB56_19045 PF00411 Ribosomal protein S11 JWB56_19050 PF00163 Ribosomal protein S4/S9 N-terminal domain JWB56_19050 PF01479 S4 domain JWB56_19055 PF01000 RNA polymerase Rpb3/RpoA insert domain JWB56_19055 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JWB56_19055 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JWB56_19060 PF01196 Ribosomal protein L17 JWB56_19065 PF00743 Flavin-binding monooxygenase-like JWB56_19070 PF02770 Acyl-CoA dehydrogenase, middle domain JWB56_19070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JWB56_19070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JWB56_19075 PF03937 Flavinator of succinate dehydrogenase JWB56_19105 PF09526 Probable metal-binding protein (DUF2387) JWB56_19110 PF01432 Peptidase family M3 JWB56_19115 PF00773 RNB domain JWB56_19115 PF00575 S1 RNA binding domain JWB56_19115 PF17876 Cold shock domain JWB56_19115 PF08206 Ribonuclease B OB domain JWB56_19115 PF08461 Ribonuclease R winged-helix domain JWB56_19165 PF12833 Helix-turn-helix domain JWB56_19170 PF00892 EamA-like transporter family JWB56_19175 PF03631 Virulence factor BrkB JWB56_19180 PF03358 NADPH-dependent FMN reductase JWB56_19205 PF02130 Uncharacterized protein family UPF0054 JWB56_19210 PF02562 PhoH-like protein JWB56_19215 PF04055 Radical SAM superfamily JWB56_19215 PF01938 TRAM domain JWB56_19215 PF00919 Uncharacterized protein family UPF0004 JWB56_19220 PF01464 Transglycosylase SLT domain JWB56_19220 PF10145 Phage-related minor tail protein JWB56_19220 PF01551 Peptidase family M23 JWB56_19230 PF00056 lactate/malate dehydrogenase, NAD binding domain JWB56_19230 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JWB56_19250 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JWB56_19255 PF01066 CDP-alcohol phosphatidyltransferase JWB56_19305 PF00593 TonB dependent receptor JWB56_19305 PF07715 TonB-dependent Receptor Plug Domain JWB56_19400 PF00809 Pterin binding enzyme JWB56_19405 PF00893 Small Multidrug Resistance protein JWB56_19410 PF00186 Dihydrofolate reductase JWB56_19430 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase JWB56_19435 PF01636 Phosphotransferase enzyme family JWB56_19440 PF13427 Domain of unknown function (DUF4111) JWB56_19445 PF07690 Major Facilitator Superfamily JWB56_19450 PF10706 Aminoglycoside-2''-adenylyltransferase JWB56_19455 PF13495 Phage integrase, N-terminal SAM-like domain JWB56_19455 PF00589 Phage integrase family JWB56_19495 PF08751 TrwC relaxase JWB56_19495 PF07057 DNA helicase TraI JWB56_19495 PF18340 DNA relaxase TraI 2B/2B-like domain JWB56_19495 PF18272 single-stranded DNA binding TraI N-terminal subdomain JWB56_19510 PF00665 Integrase core domain JWB56_19510 PF13936 Helix-turn-helix domain JWB56_19515 PF01636 Phosphotransferase enzyme family JWB56_19520 PF13936 Helix-turn-helix domain JWB56_19520 PF00665 Integrase core domain JWB56_19525 PF02796 Helix-turn-helix domain of resolvase JWB56_19525 PF00239 Resolvase, N terminal domain JWB56_19540 PF01464 Transglycosylase SLT domain JWB56_19575 PF13098 Thioredoxin-like domain JWB56_19575 PF10411 Disulfide bond isomerase protein N-terminus JWB56_19610 PF06834 TraU protein JWB56_19620 PF06986 Type-1V conjugative transfer system mating pair stabilisation JWB56_19635 PF06122 Conjugative relaxosome accessory transposon protein JWB56_19715 PF00565 Staphylococcal nuclease homologue JWB56_19720 PF00816 H-NS histone family JWB56_19765 PF13614 AAA domain JWB56_19770 PF17762 HTH domain found in ParB protein JWB56_19770 PF02195 ParB-like nuclease domain JWB56_19785 PF05816 Toxic anion resistance protein (TelA)