locus-tag	class	description
JWB56_00040	COG1960	acyl-CoA dehydrogenase activity
JWB56_00045	COG1309	transcriptional regulator
JWB56_00060	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JWB56_00065	COG1960	acyl-CoA dehydrogenase activity
JWB56_00085	COG2969	positive regulation of protein catabolic process
JWB56_00095	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
JWB56_00110	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JWB56_00115	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JWB56_00135	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JWB56_00145	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JWB56_00150	COG1408	metallophosphoesterase
JWB56_00160	COG2199	diguanylate cyclase activity
JWB56_00220	COG1607	acyl-coa hydrolase
JWB56_00250	COG2350	Protein conserved in bacteria
JWB56_00260	COG0613	PHP domain protein
JWB56_00265	COG3781	membrane
JWB56_00275	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JWB56_00290	COG1862	Preprotein translocase
JWB56_00335	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JWB56_00340	COG0629	single-stranded DNA binding
JWB56_00385	COG3646	Phage regulatory protein
JWB56_00395	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JWB56_00545	COG4695	Portal protein
JWB56_00550	COG2205	protein histidine kinase activity
JWB56_00555	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
JWB56_00575	COG0726	polysaccharide deacetylase
JWB56_00580	COG0463	Glycosyl transferase, family 2
JWB56_00585	COG0438	transferase activity, transferring glycosyl groups
JWB56_00650	COG1960	acyl-CoA dehydrogenase activity
JWB56_00655	COG1960	acyl-CoA dehydrogenase activity
JWB56_00665	COG2205	protein histidine kinase activity
JWB56_00670	COG0745	RESPONSE REGULATOR receiver
JWB56_00675	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
JWB56_00695	COG2096	Adenosyltransferase
JWB56_00745	COG0285	dihydrofolate synthase activity
JWB56_00765	COG0450	alkyl hydroperoxide reductase
JWB56_00780	COG0477	Major facilitator Superfamily
JWB56_00785	COG1272	protein, Hemolysin III
JWB56_00795	COG2153	protein acetylation
JWB56_00815	COG0183	Belongs to the thiolase family
JWB56_00820	COG2207	Transcriptional regulator
JWB56_00840	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JWB56_00860	COG0183	Belongs to the thiolase family
JWB56_00870	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
JWB56_00870	COG2885	chlorophyll binding
JWB56_00880	COG1690	Belongs to the RtcB family
JWB56_00885	COG0833	amino acid
JWB56_00895	COG2233	PERMEase
JWB56_00900	COG1217	gtp-binding protein TYPA
JWB56_00925	COG2094	Belongs to the DNA glycosylase MPG family
JWB56_00930	COG4772	TonB-dependent receptor
JWB56_00935	COG1902	pentaerythritol trinitrate reductase activity
JWB56_00950	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JWB56_00955	COG0354	folic acid binding
JWB56_00965	COG3189	MarR family transcriptional regulator
JWB56_00970	COG2824	Alkylphosphonate utilization operon protein PhnA
JWB56_00980	COG3422	double-strand break repair
JWB56_01020	COG0840	transmembrane signaling receptor activity
JWB56_01060	COG2832	Protein of unknown function (DUF454)
JWB56_01065	COG1376	ErfK ybiS ycfS ynhG family protein
JWB56_01105	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JWB56_01115	COG1289	transmembrane transporter activity
JWB56_01120	COG2814	Major facilitator Superfamily
JWB56_01140	COG1115	amino acid carrier protein
JWB56_01145	COG1752	Esterase of the alpha-beta hydrolase superfamily
JWB56_01150	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JWB56_01155	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
JWB56_01180	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JWB56_01190	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JWB56_01195	COG1077	Cell shape determining protein MreB Mrl
JWB56_01200	COG1792	Involved in formation and maintenance of cell shape
JWB56_01205	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
JWB56_01210	COG0424	maF-like protein
JWB56_01215	COG1530	ribonuclease E activity
JWB56_01225	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JWB56_01235	COG0560	Phosphoserine phosphatase
JWB56_01245	COG2249	NAD(P)H dehydrogenase (quinone) activity
JWB56_01270	COG2207	Transcriptional regulator
JWB56_01670	COG0582	viral genome integration into host DNA
JWB56_01680	COG1113	amino acid transport
JWB56_01685	COG2828	Protein conserved in bacteria
JWB56_01690	COG0142	geranyltranstransferase activity
JWB56_01695	COG2315	Protein conserved in bacteria
JWB56_01710	COG1752	Esterase of the alpha-beta hydrolase superfamily
JWB56_01730	COG2194	sulfuric ester hydrolase activity
JWB56_01735	COG0745	RESPONSE REGULATOR receiver
JWB56_01740	COG0642	Histidine kinase
JWB56_01750	COG0004	ammonium transporteR
JWB56_01755	COG0583	DNA-binding transcription factor activity
JWB56_01775	COG0525	valine-tRNA ligase activity
JWB56_01785	COG1028	Short-chain dehydrogenase reductase Sdr
JWB56_01795	COG0393	Putative heavy-metal-binding
JWB56_01800	COG0393	Putative heavy-metal-binding
JWB56_01805	COG1538	Outer membrane efflux protein
JWB56_01815	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JWB56_01820	COG0671	phosphoesterase, PA-phosphatase related
JWB56_01850	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
JWB56_01865	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JWB56_01865	COG1648	precorrin-2 dehydrogenase activity
JWB56_01870	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JWB56_01875	COG1733	regulation of RNA biosynthetic process
JWB56_01885	COG0531	amino acid
JWB56_01900	COG0321	lipoyl(octanoyl) transferase activity
JWB56_01905	COG2921	Belongs to the UPF0250 family
JWB56_01940	COG2009	succinate dehydrogenase
JWB56_01945	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
JWB56_01950	COG1053	succinate dehydrogenase
JWB56_01955	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JWB56_01980	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JWB56_02010	COG2354	Protein conserved in bacteria
JWB56_02015	COG2321	neutral zinc metallopeptidase
JWB56_02035	COG2843	Capsule synthesis protein
JWB56_02050	COG0589	response to stress
JWB56_02070	COG0505	Belongs to the CarA family
JWB56_02095	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JWB56_02100	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JWB56_02150	COG0477	Major facilitator Superfamily
JWB56_02155	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JWB56_02200	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JWB56_02205	COG0584	glycerophosphoryl diester phosphodiesterase
JWB56_02225	COG0741	lytic transglycosylase activity
JWB56_02245	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JWB56_02260	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JWB56_02280	COG0778	Nitroreductase
JWB56_02295	COG1929	Belongs to the glycerate kinase type-1 family
JWB56_02300	COG0243	molybdopterin cofactor binding
JWB56_02305	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
JWB56_02310	COG3339	Conserved Protein
JWB56_02320	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
JWB56_02335	COG1113	amino acid transport
JWB56_02345	COG0019	diaminopimelate decarboxylase activity
JWB56_02355	COG2267	carboxylic ester hydrolase activity
JWB56_02360	COG1280	lysine exporter protein (LysE YggA)
JWB56_02365	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
JWB56_02395	COG0463	Glycosyl transferase, family 2
JWB56_02415	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JWB56_02450	COG4591	ABC-type transport system involved in lipoprotein release permease component
JWB56_02455	COG1136	(ABC) transporter
JWB56_02460	COG0658	competence protein
JWB56_02460	COG2333	competence protein COMEC
JWB56_02470	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JWB56_02470	COG0616	signal peptide processing
JWB56_02475	COG0596	Alpha beta hydrolase
JWB56_02480	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JWB56_02490	COG0628	permease
JWB56_02525	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JWB56_02545	COG0823	Involved in the tonB-independent uptake of proteins
JWB56_02565	COG0824	Thioesterase
JWB56_02570	COG1473	amidohydrolase
JWB56_02590	COG0047	phosphoribosylformylglycinamidine synthase activity
JWB56_02590	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JWB56_02595	COG2814	Major facilitator Superfamily
JWB56_02605	COG1024	Enoyl-CoA hydratase
JWB56_02610	COG1056	cytidyltransferase-related domain
JWB56_02610	COG1051	belongs to the nudix hydrolase family
JWB56_02620	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JWB56_02635	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
JWB56_02650	COG4625	pathogenesis
JWB56_02655	COG0583	DNA-binding transcription factor activity
JWB56_02660	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
JWB56_02665	COG4208	sulfate ABC transporter
JWB56_02670	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
JWB56_02680	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
JWB56_02685	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JWB56_02690	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JWB56_02710	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JWB56_02725	COG0681	Belongs to the peptidase S26 family
JWB56_02740	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JWB56_02750	COG1381	Involved in DNA repair and RecF pathway recombination
JWB56_02755	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
JWB56_02765	COG4221	oxidoreductase activity
JWB56_02795	COG0436	Aminotransferase
JWB56_02815	COG0556	nucleotide-excision repair
JWB56_02870	COG2070	2-Nitropropane dioxygenase
JWB56_02900	COG1215	transferase activity, transferring glycosyl groups
JWB56_02915	COG0415	Belongs to the DNA photolyase family
JWB56_02925	COG1252	NADH dehydrogenase
JWB56_02930	COG1686	Belongs to the peptidase S11 family
JWB56_02945	COG1187	pseudouridine synthase activity
JWB56_02970	COG0477	Major facilitator Superfamily
JWB56_02975	COG0583	DNA-binding transcription factor activity
JWB56_02980	COG1823	symporter activity
JWB56_03020	COG1203	CRISPR-associated helicase, Cas3
JWB56_03045	COG0352	thiamine-phosphate diphosphorylase activity
JWB56_03080	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JWB56_03095	COG1309	transcriptional regulator
JWB56_03105	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JWB56_03110	COG0076	glutamate decarboxylase activity
JWB56_03120	COG1522	sequence-specific DNA binding
JWB56_03125	COG3961	Belongs to the TPP enzyme family
JWB56_03130	COG1113	amino acid transport
JWB56_03135	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JWB56_03140	COG0573	inorganic phosphate transmembrane transporter activity
JWB56_03150	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JWB56_03155	COG0616	signal peptide processing
JWB56_03190	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JWB56_03195	COG1686	Belongs to the peptidase S11 family
JWB56_03220	COG0583	DNA-binding transcription factor activity
JWB56_03225	COG1067	ATP-dependent peptidase activity
JWB56_03250	COG4943	cyclic-guanylate-specific phosphodiesterase activity
JWB56_03270	COG1966	Carbon starvation protein
JWB56_03275	COG2879	small protein
JWB56_03285	COG0583	DNA-binding transcription factor activity
JWB56_03290	COG0006	proline dipeptidase activity
JWB56_03295	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JWB56_03300	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JWB56_03310	COG1012	belongs to the aldehyde dehydrogenase family
JWB56_03315	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JWB56_03320	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JWB56_03320	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
JWB56_03380	COG1741	Belongs to the pirin family
JWB56_03390	COG2964	Protein conserved in bacteria
JWB56_03405	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JWB56_03410	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JWB56_03415	COG4605	iron ion homeostasis
JWB56_03420	COG4604	ABC transporter, ATP-binding protein
JWB56_03425	COG4607	ABC-type enterochelin transport system periplasmic component
JWB56_03430	COG4774	siderophore transport
JWB56_03440	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JWB56_03445	COG1021	2,3-dihydroxybenzoate-AMP ligase
JWB56_03450	COG1535	isochorismatase
JWB56_03450	COG3433	isochorismatase activity
JWB56_03460	COG1132	(ABC) transporter
JWB56_03465	COG1132	(ABC) transporter
JWB56_03470	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
JWB56_03515	COG0302	gtp cyclohydrolase
JWB56_03525	COG1529	Aldehyde oxidase and xanthine dehydrogenase
JWB56_03555	COG0308	aminopeptidase N
JWB56_03560	COG0512	Glutamine amidotransferase of anthranilate synthase
JWB56_03575	COG0174	glutamine synthetase
JWB56_03585	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
JWB56_03620	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JWB56_03625	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JWB56_03630	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JWB56_03650	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JWB56_03655	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
JWB56_03660	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
JWB56_03675	COG1960	acyl-CoA dehydrogenase activity
JWB56_03680	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
JWB56_03685	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JWB56_03695	COG2223	nitrite transmembrane transporter activity
JWB56_03705	COG0024	Methionine aminopeptidase
JWB56_03710	COG0052	Belongs to the universal ribosomal protein uS2 family
JWB56_03750	COG2951	lytic endotransglycosylase activity
JWB56_03755	COG0772	Belongs to the SEDS family
JWB56_03770	COG0842	Transport permease protein
JWB56_03775	COG1131	(ABC) transporter
JWB56_03780	COG0582	viral genome integration into host DNA
JWB56_03820	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JWB56_03880	COG0305	Participates in initiation and elongation during chromosome replication
JWB56_03975	COG5410	chromosome segregation
JWB56_04095	COG0739	heme binding
JWB56_04195	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JWB56_04210	COG4215	(ABC) transporter
JWB56_04215	COG4160	amino acid transport
JWB56_04230	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
JWB56_04235	COG0826	peptidase U32
JWB56_04240	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JWB56_04255	COG1720	tRNA m6t6A37 methyltransferase activity
JWB56_04265	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JWB56_04280	COG0642	Histidine kinase
JWB56_04290	COG0494	nUDIX hydrolase
JWB56_04300	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JWB56_04305	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JWB56_04310	COG3139	Protein of unknown function (DUF1315)
JWB56_04315	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JWB56_04320	COG1301	dicarboxylic acid transport
JWB56_04325	COG1960	acyl-CoA dehydrogenase activity
JWB56_04330	COG2819	hydrolase of the alpha beta superfamily
JWB56_04340	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
JWB56_04350	COG2195	Cleaves the N-terminal amino acid of tripeptides
JWB56_04355	COG1234	tRNA 3'-trailer cleavage
JWB56_04380	COG2363	Small membrane protein
JWB56_04400	COG0513	Belongs to the DEAD box helicase family
JWB56_04410	COG0778	Nitroreductase
JWB56_04430	COG3328	transposase activity
JWB56_04505	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JWB56_04710	COG1286	toxin biosynthetic process
JWB56_04735	COG4783	chaperone-mediated protein folding
JWB56_04740	COG1610	YqeY-like protein
JWB56_04840	COG3111	PFAM Bacterial OB fold (BOF) protein
JWB56_04865	COG3243	poly(R)-hydroxyalkanoic acid synthase
JWB56_04870	COG0786	glutamate:sodium symporter activity
JWB56_04880	COG0583	DNA-binding transcription factor activity
JWB56_04890	COG1028	Short-chain dehydrogenase reductase Sdr
JWB56_04905	COG2186	Transcriptional regulator
JWB56_04965	COG0477	Major facilitator Superfamily
JWB56_04990	COG2995	paraquat-inducible protein a
JWB56_04995	COG3008	intermembrane lipid transfer
JWB56_04995	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JWB56_05005	COG2351	hydroxyisourate hydrolase activity
JWB56_05045	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JWB56_05055	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JWB56_05060	COG0642	Histidine kinase
JWB56_05065	COG0745	RESPONSE REGULATOR receiver
JWB56_05085	COG1794	racemase activity, acting on amino acids and derivatives
JWB56_05115	COG1301	dicarboxylic acid transport
JWB56_05125	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JWB56_05130	COG2011	ABC-type metal ion transport system permease component
JWB56_05135	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JWB56_05140	COG1464	Belongs to the NlpA lipoprotein family
JWB56_05145	COG0151	Belongs to the GarS family
JWB56_05150	COG0138	bifunctional purine biosynthesis protein purh
JWB56_05155	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
JWB56_05185	COG2308	Evidence 4 Homologs of previously reported genes of
JWB56_05195	COG1305	Transglutaminase-like
JWB56_05205	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JWB56_05210	COG0305	Participates in initiation and elongation during chromosome replication
JWB56_05235	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
JWB56_05245	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JWB56_05250	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JWB56_05275	COG0726	polysaccharide deacetylase
JWB56_05275	COG1649	PFAM Uncharacterised BCR, COG1649
JWB56_05280	COG1215	transferase activity, transferring glycosyl groups
JWB56_05285	COG3658	cytochrome
JWB56_05295	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JWB56_05310	COG0583	DNA-binding transcription factor activity
JWB56_05330	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JWB56_05335	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JWB56_05350	COG1960	acyl-CoA dehydrogenase activity
JWB56_05355	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JWB56_05360	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JWB56_05385	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
JWB56_05390	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
JWB56_05400	COG2205	protein histidine kinase activity
JWB56_05405	COG0745	RESPONSE REGULATOR receiver
JWB56_05410	COG0174	glutamine synthetase
JWB56_05430	COG0729	surface antigen
JWB56_05455	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JWB56_05460	COG2814	Major facilitator Superfamily
JWB56_05475	COG0583	DNA-binding transcription factor activity
JWB56_05490	COG1187	pseudouridine synthase activity
JWB56_05510	COG0802	atpase or kinase
JWB56_05515	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JWB56_05525	COG1923	regulation of RNA biosynthetic process
JWB56_05530	COG0697	spore germination
JWB56_05555	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JWB56_05560	COG0519	Catalyzes the synthesis of GMP from XMP
JWB56_05560	COG0518	GMP synthase (glutamine-hydrolyzing) activity
JWB56_05565	COG4302	ethanolamine ammonia-lyase activity
JWB56_05570	COG4303	Ethanolamine ammonia lyase large subunit
JWB56_05575	COG0531	amino acid
JWB56_05595	COG1454	alcohol dehydrogenase
JWB56_05600	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JWB56_05625	COG0308	aminopeptidase N
JWB56_05665	COG1605	Chorismate mutase
JWB56_05685	COG1309	transcriptional regulator
JWB56_05725	COG4773	Receptor
JWB56_05745	COG0488	(ABC) transporter
JWB56_05750	COG0589	response to stress
JWB56_05765	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JWB56_05775	COG3135	benzoate transporter
JWB56_05780	COG1522	sequence-specific DNA binding
JWB56_05790	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JWB56_05795	COG0583	DNA-binding transcription factor activity
JWB56_05805	COG0183	Belongs to the thiolase family
JWB56_05815	COG2030	dehydratase
JWB56_05820	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JWB56_05835	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JWB56_05845	COG0824	Thioesterase
JWB56_05850	COG1454	alcohol dehydrogenase
JWB56_05860	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JWB56_05880	COG0069	glutamate synthase activity
JWB56_05900	COG2814	Major facilitator Superfamily
JWB56_05915	COG0511	ligase activity, forming carbon-carbon bonds
JWB56_05935	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JWB56_05935	COG1116	anion transmembrane transporter activity
JWB56_05940	COG0745	RESPONSE REGULATOR receiver
JWB56_05950	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JWB56_05950	COG2146	nitrite reductase [NAD(P)H] activity
JWB56_05955	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JWB56_05960	COG0243	molybdopterin cofactor binding
JWB56_05970	COG0243	molybdopterin cofactor binding
JWB56_05975	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
JWB56_05990	COG0315	cyclic pyranopterin monophosphate synthase activity
JWB56_05990	COG0521	Mo-molybdopterin cofactor biosynthetic process
JWB56_05995	COG0303	'Molybdopterin
JWB56_06010	COG0697	spore germination
JWB56_06030	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
JWB56_06035	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JWB56_06090	COG2204	response regulator
JWB56_06095	COG3852	Histidine kinase
JWB56_06120	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JWB56_06125	COG0575	Belongs to the CDS family
JWB56_06160	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JWB56_06175	COG2137	regulation of response to DNA damage stimulus
JWB56_06185	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JWB56_06190	COG1011	Hydrolase
JWB56_06225	COG1113	amino acid transport
JWB56_06240	COG0659	secondary active sulfate transmembrane transporter activity
JWB56_06245	COG2135	peptidase activity
JWB56_06260	COG5001	Diguanylate cyclase
JWB56_06260	COG3300	MHYT domain
JWB56_06285	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JWB56_06285	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JWB56_06285	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
JWB56_06290	COG1105	Belongs to the carbohydrate kinase PfkB family
JWB56_06295	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JWB56_06295	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JWB56_06325	COG0024	Methionine aminopeptidase
JWB56_06330	COG0583	DNA-binding transcription factor activity
JWB56_06340	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
JWB56_06345	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JWB56_06350	COG0517	IMP dehydrogenase activity
JWB56_06350	COG0516	GMP reductase activity
JWB56_06375	COG0552	protein localization to endoplasmic reticulum
JWB56_06385	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
JWB56_06395	COG4890	Cyd operon protein YbgT
JWB56_06400	COG1294	oxidase, subunit
JWB56_06415	COG1585	Membrane protein implicated in regulation of membrane protease activity
JWB56_06425	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JWB56_06430	COG4774	siderophore transport
JWB56_06445	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JWB56_06450	COG0569	domain protein
JWB56_06455	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JWB56_06485	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
JWB56_06490	COG0542	response to heat
JWB56_06515	COG1902	pentaerythritol trinitrate reductase activity
JWB56_06515	COG0446	pyridine nucleotide-disulphide oxidoreductase
JWB56_06560	COG2323	membrane
JWB56_06565	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
JWB56_06575	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JWB56_06580	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JWB56_06585	COG0183	Belongs to the thiolase family
JWB56_06590	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JWB56_06595	COG0596	Alpha beta hydrolase
JWB56_06600	COG2271	Major facilitator Superfamily
JWB56_06605	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JWB56_06610	COG3485	protocatechuate 3,4-dioxygenase
JWB56_06615	COG3485	protocatechuate 3,4-dioxygenase
JWB56_06620	COG0710	3-dehydroquinate dehydratase activity
JWB56_06625	COG3420	alginic acid biosynthetic process
JWB56_06630	COG3659	wide pore channel activity
JWB56_06635	COG4993	Dehydrogenase
JWB56_06645	COG2391	methyltransferase activity
JWB56_06660	COG1414	Transcriptional regulator
JWB56_06665	COG0583	DNA-binding transcription factor activity
JWB56_06670	COG1960	acyl-CoA dehydrogenase activity
JWB56_06695	COG2814	Major facilitator Superfamily
JWB56_06705	COG0154	amidase activity
JWB56_06725	COG4638	Rieske (2fe-2S)
JWB56_06735	COG1028	Short-chain dehydrogenase reductase Sdr
JWB56_06745	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JWB56_06755	COG3733	amine oxidase
JWB56_06765	COG1012	belongs to the aldehyde dehydrogenase family
JWB56_06775	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JWB56_06780	COG0183	Belongs to the thiolase family
JWB56_06785	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JWB56_06790	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JWB56_06800	COG4829	muconolactone delta-isomerase
JWB56_06805	COG4948	Mandelate Racemase Muconate Lactonizing
JWB56_06810	COG0583	DNA-binding transcription factor activity
JWB56_06820	COG2186	Transcriptional regulator
JWB56_06840	COG1012	belongs to the aldehyde dehydrogenase family
JWB56_06855	COG0446	pyridine nucleotide-disulphide oxidoreductase
JWB56_06855	COG1902	pentaerythritol trinitrate reductase activity
JWB56_06895	COG1309	transcriptional regulator
JWB56_06905	COG4221	oxidoreductase activity
JWB56_06910	COG4689	acetoacetate decarboxylase
JWB56_06920	COG1902	pentaerythritol trinitrate reductase activity
JWB56_06935	COG1335	isochorismatase
JWB56_06940	COG0583	DNA-binding transcription factor activity
JWB56_06950	COG0475	glutathione-regulated potassium exporter activity
JWB56_06950	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JWB56_06965	COG1473	amidohydrolase
JWB56_07025	COG2188	Transcriptional regulator
JWB56_07040	COG0583	DNA-binding transcription factor activity
JWB56_07055	COG1566	PFAM secretion protein HlyD family protein
JWB56_07070	COG1012	belongs to the aldehyde dehydrogenase family
JWB56_07075	COG0129	dihydroxy-acid dehydratase activity
JWB56_07085	COG0583	DNA-binding transcription factor activity
JWB56_07090	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JWB56_07100	COG2084	Dehydrogenase
JWB56_07115	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JWB56_07175	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
JWB56_07190	COG0556	nucleotide-excision repair
JWB56_07225	COG1073	alpha beta
JWB56_07235	COG1028	Short-chain dehydrogenase reductase Sdr
JWB56_07250	COG2207	Transcriptional regulator
JWB56_07260	COG2205	protein histidine kinase activity
JWB56_07265	COG0745	RESPONSE REGULATOR receiver
JWB56_07270	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JWB56_07275	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JWB56_07280	COG1538	Outer membrane efflux protein
JWB56_07290	COG2072	flavoprotein involved in K transport
JWB56_07300	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JWB56_07850	COG3539	Fimbrial protein
JWB56_07875	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
JWB56_07885	COG0753	catalase activity
JWB56_07900	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JWB56_07960	COG3433	isochorismatase activity
JWB56_07960	COG1535	isochorismatase
JWB56_07965	COG1028	Short-chain dehydrogenase reductase Sdr
JWB56_07970	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
JWB56_07975	COG4149	molybdate abc transporter
JWB56_07980	COG0725	ABC transporter, periplasmic molybdate-binding protein
JWB56_07990	COG4638	Rieske (2fe-2S)
JWB56_07995	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
JWB56_08000	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JWB56_08000	COG0543	2 iron, 2 sulfur cluster binding
JWB56_08015	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JWB56_08025	COG1028	Short-chain dehydrogenase reductase Sdr
JWB56_08045	COG1028	Short-chain dehydrogenase reductase Sdr
JWB56_08050	COG2610	gluconate transmembrane transporter activity
JWB56_08060	COG0583	DNA-binding transcription factor activity
JWB56_08075	COG2031	fatty acid transporter
JWB56_08080	COG0183	Belongs to the thiolase family
JWB56_08085	COG0583	DNA-binding transcription factor activity
JWB56_08090	COG0583	DNA-binding transcription factor activity
JWB56_08105	COG1027	Aspartate ammonia-lyase
JWB56_08115	COG0477	Major facilitator Superfamily
JWB56_08135	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JWB56_08140	COG4521	taurine ABC transporter
JWB56_08155	COG2188	Transcriptional regulator
JWB56_08165	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
JWB56_08170	COG1733	regulation of RNA biosynthetic process
JWB56_08175	COG2207	Transcriptional regulator
JWB56_08175	COG3708	Transcriptional regulator
JWB56_08190	COG0730	response to heat
JWB56_08200	COG3453	Protein conserved in bacteria
JWB56_08200	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JWB56_08210	COG3781	membrane
JWB56_08215	COG1063	alcohol dehydrogenase
JWB56_08225	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JWB56_08230	COG0508	dehydrogenase complex catalyzes the overall conversion of
JWB56_08235	COG0022	dehydrogenase e1 component
JWB56_08240	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JWB56_08245	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
JWB56_08260	COG3706	GGDEF domain
JWB56_08275	COG0133	tryptophan synthase activity
JWB56_08285	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JWB56_08320	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JWB56_08345	COG2226	methyltransferase
JWB56_08400	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JWB56_08405	COG4773	Receptor
JWB56_08425	COG0730	response to heat
JWB56_08430	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JWB56_08445	COG0406	alpha-ribazole phosphatase activity
JWB56_08450	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
JWB56_08465	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JWB56_08495	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
JWB56_08505	COG4264	IucA IucC family
JWB56_08510	COG4264	IucA IucC family
JWB56_08515	COG2814	Major facilitator Superfamily
JWB56_08530	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JWB56_08545	COG1960	acyl-CoA dehydrogenase activity
JWB56_08550	COG1960	acyl-CoA dehydrogenase activity
JWB56_08555	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JWB56_08565	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JWB56_08570	COG0776	regulation of translation
JWB56_08595	COG0822	iron-sulfur transferase activity
JWB56_08600	COG0316	Belongs to the HesB IscA family
JWB56_08630	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JWB56_08650	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
JWB56_08690	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JWB56_08700	COG0339	signal peptide processing
JWB56_08720	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
JWB56_08745	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
JWB56_08750	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
JWB56_08780	COG0776	regulation of translation
JWB56_08845	COG0084	hydrolase, TatD family'
JWB56_08865	COG1663	tetraacyldisaccharide 4'-kinase activity
JWB56_08870	COG1132	(ABC) transporter
JWB56_08880	COG0811	peptide transport
JWB56_08885	COG1475	DNA binding
JWB56_08890	COG1192	Involved in chromosome partitioning
JWB56_08900	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
JWB56_08915	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JWB56_08920	COG0191	fructose-bisphosphate aldolase activity
JWB56_08940	COG0424	maF-like protein
JWB56_08945	COG2850	peptidyl-arginine hydroxylation
JWB56_08955	COG0640	Transcriptional regulator
JWB56_08965	COG3619	membrane
JWB56_08970	COG3122	Protein conserved in bacteria
JWB56_08975	COG1132	(ABC) transporter
JWB56_08995	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JWB56_09000	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JWB56_09010	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
JWB56_09010	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
JWB56_09010	COG0506	proline dehydrogenase activity
JWB56_09040	COG2353	YceI-like domain
JWB56_09050	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JWB56_09095	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JWB56_09095	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JWB56_09120	COG3539	Fimbrial protein
JWB56_09160	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JWB56_09170	COG0583	DNA-binding transcription factor activity
JWB56_09205	COG1522	sequence-specific DNA binding
JWB56_09215	COG1126	abc transporter atp-binding protein
JWB56_09220	COG0765	amino acid transport
JWB56_09225	COG0765	amino acid transport
JWB56_09255	COG1464	Belongs to the NlpA lipoprotein family
JWB56_09265	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JWB56_09270	COG2011	ABC-type metal ion transport system permease component
JWB56_09275	COG0012	GTP binding
JWB56_09300	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
JWB56_09340	COG0386	Belongs to the glutathione peroxidase family
JWB56_09350	COG0436	Aminotransferase
JWB56_09355	COG1301	dicarboxylic acid transport
JWB56_09390	COG3634	alkyl hydroperoxide reductase activity
JWB56_09405	COG0583	DNA-binding transcription factor activity
JWB56_09410	COG0798	PFAM Bile acid sodium symporter
JWB56_09415	COG0640	Transcriptional regulator
JWB56_09430	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
JWB56_09440	COG0583	DNA-binding transcription factor activity
JWB56_09450	COG1953	Uracil, thiamine, allantoin
JWB56_09460	COG2175	clavaminate synthase activity
JWB56_09465	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JWB56_09470	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
JWB56_09475	COG4521	taurine ABC transporter
JWB56_09485	COG0477	Major facilitator Superfamily
JWB56_09505	COG1271	oxidase subunit
JWB56_09510	COG1294	oxidase, subunit
JWB56_09520	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JWB56_09540	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JWB56_09560	COG3052	prosthetic group binding
JWB56_09565	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
JWB56_09575	COG2814	Major facilitator Superfamily
JWB56_09590	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JWB56_09595	COG1346	cytolysis
JWB56_09605	COG0583	DNA-binding transcription factor activity
JWB56_09610	COG0625	glutathione transferase activity
JWB56_09615	COG0625	glutathione transferase activity
JWB56_09620	COG0583	DNA-binding transcription factor activity
JWB56_09635	COG1045	serine acetyltransferase
JWB56_09640	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JWB56_09645	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JWB56_09650	COG1280	lysine exporter protein (LysE YggA)
JWB56_09660	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JWB56_09665	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JWB56_09670	COG1126	abc transporter atp-binding protein
JWB56_09675	COG0765	amino acid transport
JWB56_09680	COG0765	amino acid transport
JWB56_09700	COG2205	protein histidine kinase activity
JWB56_09700	COG0784	Response regulator, receiver
JWB56_09790	COG0583	DNA-binding transcription factor activity
JWB56_09810	COG0318	PFAM AMP-dependent synthetase and ligase
JWB56_09815	COG1309	transcriptional regulator
JWB56_09820	COG1960	acyl-CoA dehydrogenase activity
JWB56_09825	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JWB56_09830	COG1024	Enoyl-CoA hydratase
JWB56_09835	COG4770	biotin carboxylase activity
JWB56_09845	COG0583	DNA-binding transcription factor activity
JWB56_09860	COG1960	acyl-CoA dehydrogenase activity
JWB56_09870	COG2814	Major facilitator Superfamily
JWB56_09880	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JWB56_09885	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JWB56_09890	COG2814	Major facilitator Superfamily
JWB56_09895	COG1960	acyl-CoA dehydrogenase activity
JWB56_09900	COG1024	Enoyl-CoA hydratase
JWB56_09905	COG1028	Short-chain dehydrogenase reductase Sdr
JWB56_09910	COG1250	3-hydroxyacyl-CoA dehydrogenase
JWB56_09915	COG0183	Belongs to the thiolase family
JWB56_09925	COG2814	Major facilitator Superfamily
JWB56_09935	COG1024	Enoyl-CoA hydratase
JWB56_09945	COG1804	L-carnitine dehydratase bile acid-inducible protein F
JWB56_09950	COG1960	acyl-CoA dehydrogenase activity
JWB56_09955	COG2814	Major facilitator Superfamily
JWB56_09960	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JWB56_09965	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JWB56_09980	COG3842	ATPase activity
JWB56_09985	COG1840	ABC-type Fe3 transport system, periplasmic component
JWB56_09995	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JWB56_10000	COG1414	Transcriptional regulator
JWB56_10010	COG0583	DNA-binding transcription factor activity
JWB56_10015	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JWB56_10020	COG1012	belongs to the aldehyde dehydrogenase family
JWB56_10030	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JWB56_10040	COG1012	belongs to the aldehyde dehydrogenase family
JWB56_10045	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JWB56_10050	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JWB56_10055	COG2267	carboxylic ester hydrolase activity
JWB56_10075	COG3038	cytochrome b561
JWB56_10080	COG0753	catalase activity
JWB56_10085	COG2271	Major facilitator Superfamily
JWB56_10090	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JWB56_10095	COG1804	L-carnitine dehydratase bile acid-inducible protein F
JWB56_10125	COG1278	Cold shock
JWB56_10160	COG0210	DNA helicase
JWB56_10165	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JWB56_10170	COG2050	protein possibly involved in aromatic compounds catabolism
JWB56_10180	COG3327	negative regulation of DNA-templated transcription, initiation
JWB56_10185	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
JWB56_10190	COG0183	Belongs to the thiolase family
JWB56_10195	COG1250	3-hydroxyacyl-CoA dehydrogenase
JWB56_10200	COG1024	Enoyl-CoA hydratase
JWB56_10205	COG1024	Enoyl-CoA hydratase
JWB56_10210	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JWB56_10215	COG2151	metal-sulfur cluster biosynthetic enzyme
JWB56_10220	COG3396	Phenylacetate-CoA oxygenase
JWB56_10225	COG3460	Phenylacetate-CoA oxygenase
JWB56_10230	COG3396	Phenylacetate-CoA oxygenase
JWB56_10235	COG2030	dehydratase
JWB56_10235	COG1012	belongs to the aldehyde dehydrogenase family
JWB56_10240	COG1760	l-serine dehydratase
JWB56_10250	COG0531	amino acid
JWB56_10255	COG1012	belongs to the aldehyde dehydrogenase family
JWB56_10280	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JWB56_10300	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JWB56_10310	COG0789	Transcriptional regulator
JWB56_10320	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JWB56_10335	COG2807	transmembrane transport
JWB56_10340	COG0590	tRNA wobble adenosine to inosine editing
JWB56_10455	COG1116	anion transmembrane transporter activity
JWB56_10460	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JWB56_10470	COG0864	Transcriptional regulator
JWB56_10480	COG1733	regulation of RNA biosynthetic process
JWB56_10485	COG2249	NAD(P)H dehydrogenase (quinone) activity
JWB56_10490	COG0439	Biotin carboxylase
JWB56_10505	COG1063	alcohol dehydrogenase
JWB56_10515	COG1309	transcriptional regulator
JWB56_10535	COG0038	chloride channel
JWB56_10540	COG4770	biotin carboxylase activity
JWB56_10560	COG1914	H( )-stimulated, divalent metal cation uptake system
JWB56_10565	COG0583	DNA-binding transcription factor activity
JWB56_10585	COG3209	COG3209 Rhs family protein
JWB56_10630	COG1250	3-hydroxyacyl-CoA dehydrogenase
JWB56_10650	COG2814	Major facilitator Superfamily
JWB56_10660	COG1560	Kdo2-lipid A biosynthetic process
JWB56_10670	COG5006	permease, DMT superfamily
JWB56_10675	COG1522	sequence-specific DNA binding
JWB56_10690	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
JWB56_10700	COG4122	O-methyltransferase activity
JWB56_10730	COG1538	Outer membrane efflux protein
JWB56_10735	COG1137	ATPase activity
JWB56_10740	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
JWB56_10750	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
JWB56_10805	COG5434	Belongs to the glycosyl hydrolase 28 family
JWB56_10825	COG3566	protein conserved in bacteria
JWB56_10845	COG3567	Phage-associated protein, HI1409 family
JWB56_10850	COG5410	chromosome segregation
JWB56_10920	COG2814	Major facilitator Superfamily
JWB56_10990	COG1570	exodeoxyribonuclease VII activity
JWB56_11040	COG0583	DNA-binding transcription factor activity
JWB56_11045	COG4638	Rieske (2fe-2S)
JWB56_11050	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
JWB56_11055	COG0543	2 iron, 2 sulfur cluster binding
JWB56_11055	COG0633	Ferredoxin
JWB56_11060	COG1028	Short-chain dehydrogenase reductase Sdr
JWB56_11065	COG3135	benzoate transporter
JWB56_11070	COG2814	Major facilitator Superfamily
JWB56_11085	COG1643	Atp-dependent helicase
JWB56_11090	COG0450	alkyl hydroperoxide reductase
JWB56_11100	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
JWB56_11110	COG3634	alkyl hydroperoxide reductase activity
JWB56_11130	COG0220	tRNA (guanine-N7-)-methyltransferase activity
JWB56_11135	COG0625	glutathione transferase activity
JWB56_11145	COG2885	chlorophyll binding
JWB56_11180	COG0542	response to heat
JWB56_11195	COG1765	OsmC-like protein
JWB56_11210	COG0667	Aldo Keto reductase
JWB56_11225	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JWB56_11235	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JWB56_11245	COG0527	aspartate kinase activity
JWB56_11255	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JWB56_11265	COG3038	cytochrome b561
JWB56_11270	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
JWB56_11275	COG2252	PERMEase
JWB56_11285	COG2072	flavoprotein involved in K transport
JWB56_11300	COG1741	Belongs to the pirin family
JWB56_11315	COG0300	oxidoreductase activity
JWB56_11320	COG2072	flavoprotein involved in K transport
JWB56_11325	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
JWB56_11370	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JWB56_11385	COG2814	Major facilitator Superfamily
JWB56_11390	COG1024	Enoyl-CoA hydratase
JWB56_11395	COG1012	belongs to the aldehyde dehydrogenase family
JWB56_11405	COG1960	acyl-CoA dehydrogenase activity
JWB56_11430	COG2186	Transcriptional regulator
JWB56_11435	COG1012	belongs to the aldehyde dehydrogenase family
JWB56_11445	COG4948	Mandelate Racemase Muconate Lactonizing
JWB56_11450	COG2271	Major facilitator Superfamily
JWB56_11455	COG2721	sulfolactate sulfo-lyase activity
JWB56_11460	COG0697	spore germination
JWB56_11505	COG1012	belongs to the aldehyde dehydrogenase family
JWB56_11525	COG0531	amino acid
JWB56_11535	COG1113	amino acid transport
JWB56_11560	COG3209	COG3209 Rhs family protein
JWB56_11595	COG1902	pentaerythritol trinitrate reductase activity
JWB56_11595	COG0446	pyridine nucleotide-disulphide oxidoreductase
JWB56_11605	COG2203	Gaf domain
JWB56_11605	COG3706	GGDEF domain
JWB56_11605	COG4251	negative regulation of phosphorylation
JWB56_11605	COG5001	Diguanylate cyclase
JWB56_11615	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JWB56_11660	COG4172	Belongs to the ABC transporter superfamily
JWB56_11665	COG4239	(ABC) transporter, permease
JWB56_11670	COG4174	ABC transporter (Permease)
JWB56_11680	COG0741	lytic transglycosylase activity
JWB56_11680	COG1388	LysM domain
JWB56_11680	COG0741	lytic transglycosylase activity
JWB56_11680	COG1388	LysM domain
JWB56_11685	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JWB56_11725	COG0583	DNA-binding transcription factor activity
JWB56_11730	COG1279	arginine transmembrane transporter activity
JWB56_11750	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JWB56_11755	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JWB56_11760	COG0006	proline dipeptidase activity
JWB56_11820	COG3384	dioxygenase
JWB56_11830	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JWB56_11835	COG2878	Part of a membrane complex involved in electron transport
JWB56_11840	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JWB56_11865	COG0768	penicillin binding
JWB56_11870	COG0742	ribosomal rna small subunit methyltransferase
JWB56_11885	COG0830	nickel cation binding
JWB56_11930	COG1253	flavin adenine dinucleotide binding
JWB56_11935	COG2851	Citrate transporter
JWB56_11985	COG1773	rubredoxin
JWB56_11990	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JWB56_12000	COG0583	DNA-binding transcription factor activity
JWB56_12025	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
JWB56_12030	COG4181	ATPase activity
JWB56_12075	COG1262	PFAM Formylglycine-generating sulfatase enzyme
JWB56_12095	COG0306	phosphate transporter
JWB56_12105	COG3958	Transketolase
JWB56_12110	COG3959	Transketolase, thiamine diphosphate binding domain
JWB56_12115	COG2271	Major facilitator Superfamily
JWB56_12120	COG1028	Short-chain dehydrogenase reductase Sdr
JWB56_12125	COG0583	DNA-binding transcription factor activity
JWB56_12140	COG2223	nitrite transmembrane transporter activity
JWB56_12145	COG2207	Transcriptional regulator
JWB56_12150	COG2066	Belongs to the glutaminase family
JWB56_12155	COG0242	peptide deformylase activity
JWB56_12160	COG0477	Major facilitator Superfamily
JWB56_12170	COG0028	Belongs to the TPP enzyme family
JWB56_12185	COG1028	Short-chain dehydrogenase reductase Sdr
JWB56_12190	COG2267	carboxylic ester hydrolase activity
JWB56_12200	COG2271	Major facilitator Superfamily
JWB56_12205	COG0446	pyridine nucleotide-disulphide oxidoreductase
JWB56_12215	COG1028	Short-chain dehydrogenase reductase Sdr
JWB56_12235	COG1414	Transcriptional regulator
JWB56_12250	COG1024	Enoyl-CoA hydratase
JWB56_12260	COG1215	transferase activity, transferring glycosyl groups
JWB56_12265	COG0726	polysaccharide deacetylase
JWB56_12265	COG1649	PFAM Uncharacterised BCR, COG1649
JWB56_12275	COG4681	YaeQ
JWB56_12285	COG0523	cobalamin synthesis protein
JWB56_12295	COG1607	acyl-coa hydrolase
JWB56_12305	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JWB56_12310	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JWB56_12315	COG1309	transcriptional regulator
JWB56_12340	COG2040	homocysteine
JWB56_12345	COG0531	amino acid
JWB56_12400	COG1595	DNA-templated transcription, initiation
JWB56_12410	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JWB56_12415	COG0477	Major facilitator Superfamily
JWB56_12475	COG3177	Filamentation induced by cAMP protein fic
JWB56_12535	COG0582	viral genome integration into host DNA
JWB56_12545	COG0405	Gamma-glutamyltransferase
JWB56_12550	COG2814	Major facilitator Superfamily
JWB56_12560	COG2050	protein possibly involved in aromatic compounds catabolism
JWB56_12575	COG1090	epimerase
JWB56_12595	COG0420	3'-5' exonuclease activity
JWB56_12620	COG0735	belongs to the Fur family
JWB56_12625	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JWB56_12645	COG0121	glutamine amidotransferase
JWB56_12660	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JWB56_12670	COG0210	DNA helicase
JWB56_12675	COG2885	chlorophyll binding
JWB56_12680	COG0204	Acyl-transferase
JWB56_12695	COG2894	cell division
JWB56_12710	COG1280	lysine exporter protein (LysE YggA)
JWB56_12715	COG1674	ftsk spoiiie
JWB56_12715	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JWB56_12720	COG0492	ferredoxin-NADP+ reductase activity
JWB56_12725	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
JWB56_12735	COG0456	acetyltransferase
JWB56_12780	COG1981	membrane
JWB56_12795	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
JWB56_12795	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JWB56_12815	COG1012	belongs to the aldehyde dehydrogenase family
JWB56_12825	COG0657	acetylesterase activity
JWB56_12835	COG0473	3-isopropylmalate dehydrogenase activity
JWB56_12840	COG0583	DNA-binding transcription factor activity
JWB56_12860	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
JWB56_12885	COG0564	pseudouridine synthase activity
JWB56_12895	COG0358	DNA primase activity
JWB56_12910	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
JWB56_12940	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JWB56_12970	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JWB56_12980	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JWB56_12980	COG0352	thiamine-phosphate diphosphorylase activity
JWB56_12980	COG0351	phosphomethylpyrimidine kinase
JWB56_12985	COG1652	LysM domain
JWB56_13010	COG1399	metal-binding, possibly nucleic acid-binding protein
JWB56_13015	COG3101	peptidyl-lysine hydroxylation
JWB56_13020	COG0009	L-threonylcarbamoyladenylate synthase
JWB56_13025	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JWB56_13030	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JWB56_13045	COG4106	trans-aconitate 2-methyltransferase activity
JWB56_13060	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JWB56_13060	COG0596	Alpha beta hydrolase
JWB56_13060	COG2226	methyltransferase
JWB56_13070	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
JWB56_13075	COG2223	nitrite transmembrane transporter activity
JWB56_13095	COG1196	nuclear chromosome segregation
JWB56_13105	COG0730	response to heat
JWB56_13120	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JWB56_13130	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JWB56_13180	COG0489	protein tyrosine kinase activity
JWB56_13190	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JWB56_13190	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JWB56_13220	COG2515	1-aminocyclopropane-1-carboxylate deaminase
JWB56_13225	COG2081	HI0933 family
JWB56_13235	COG0668	transmembrane transport
JWB56_13255	COG0583	DNA-binding transcription factor activity
JWB56_13280	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JWB56_13285	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JWB56_13315	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
JWB56_13355	COG0745	RESPONSE REGULATOR receiver
JWB56_13375	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JWB56_13385	COG0384	phenazine biosynthesis protein PhzF
JWB56_13405	COG1309	transcriptional regulator
JWB56_13410	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JWB56_13425	COG0583	DNA-binding transcription factor activity
JWB56_13455	COG0583	DNA-binding transcription factor activity
JWB56_13470	COG0583	DNA-binding transcription factor activity
JWB56_13475	COG1053	succinate dehydrogenase
JWB56_13485	COG1804	L-carnitine dehydratase bile acid-inducible protein F
JWB56_13490	COG2814	Major facilitator Superfamily
JWB56_13495	COG1960	acyl-CoA dehydrogenase activity
JWB56_13500	COG0583	DNA-binding transcription factor activity
JWB56_13505	COG1063	alcohol dehydrogenase
JWB56_13535	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
JWB56_13540	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
JWB56_13545	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JWB56_13560	COG3667	copper resistance
JWB56_13565	COG2132	Multicopper oxidase
JWB56_13575	COG0561	phosphatase activity
JWB56_13580	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JWB56_13590	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
JWB56_13605	COG1214	PFAM Peptidase M22, glycoprotease
JWB56_13665	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JWB56_13670	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
JWB56_13675	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JWB56_13735	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JWB56_13745	COG1846	Transcriptional regulator
JWB56_13750	COG1764	response to oxidative stress
JWB56_13790	COG0037	tRNA processing
JWB56_13800	COG0248	Ppx GppA phosphatase
JWB56_13825	COG0072	phenylalanine-tRNA ligase activity
JWB56_13860	COG1238	metal cluster binding
JWB56_13865	COG0625	glutathione transferase activity
JWB56_13880	COG0318	PFAM AMP-dependent synthetase and ligase
JWB56_13885	COG3028	Belongs to the UPF0307 family
JWB56_13890	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JWB56_13910	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JWB56_13915	COG0617	tRNA 3'-terminal CCA addition
JWB56_13920	COG1555	photosystem II stabilization
JWB56_13925	COG3956	TIGRFAM MazG family protein
JWB56_13935	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JWB56_13955	COG0784	Response regulator, receiver
JWB56_13955	COG2205	protein histidine kinase activity
JWB56_13955	COG5002	protein histidine kinase activity
JWB56_13960	COG1024	Enoyl-CoA hydratase
JWB56_13965	COG2084	Dehydrogenase
JWB56_13970	COG3622	Belongs to the hyi family
JWB56_14000	COG0697	spore germination
JWB56_14010	COG2814	Major facilitator Superfamily
JWB56_14030	COG2132	Multicopper oxidase
JWB56_14045	COG2205	protein histidine kinase activity
JWB56_14130	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JWB56_14140	COG0583	DNA-binding transcription factor activity
JWB56_14150	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JWB56_14160	COG0084	hydrolase, TatD family'
JWB56_14175	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JWB56_14205	COG0440	acetolactate synthase activity
JWB56_14210	COG0028	Belongs to the TPP enzyme family
JWB56_14235	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JWB56_14240	COG1136	(ABC) transporter
JWB56_14240	COG0577	efflux transmembrane transporter activity
JWB56_14245	COG1538	Outer membrane efflux protein
JWB56_14260	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
JWB56_14265	COG1162	GTPase activity
JWB56_14275	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JWB56_14315	COG1426	Protein conserved in bacteria
JWB56_14350	COG0793	Belongs to the peptidase S41A family
JWB56_14365	COG2267	carboxylic ester hydrolase activity
JWB56_14375	COG1012	belongs to the aldehyde dehydrogenase family
JWB56_14380	COG3265	gluconokinase activity
JWB56_14390	COG0800	Aldolase
JWB56_14400	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JWB56_14405	COG0280	phosphate acetyltransferase
JWB56_14405	COG0857	belongs to the CobB CobQ family
JWB56_14410	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
JWB56_14410	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
JWB56_14430	COG0740	serine-type endopeptidase activity
JWB56_14440	COG4774	siderophore transport
JWB56_14450	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JWB56_14460	COG2813	Specifically methylates the guanine in position
JWB56_14460	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JWB56_14560	COG0788	formyltetrahydrofolate deformylase activity
JWB56_14585	COG4651	solute:proton antiporter activity
JWB56_14585	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JWB56_14605	COG0724	RNA recognition motif
JWB56_14610	COG0210	DNA helicase
JWB56_14635	COG1733	regulation of RNA biosynthetic process
JWB56_14645	COG2900	Belongs to the SlyX family
JWB56_14650	COG0488	(ABC) transporter
JWB56_14655	COG1280	lysine exporter protein (LysE YggA)
JWB56_14660	COG1560	Kdo2-lipid A biosynthetic process
JWB56_14670	COG1301	dicarboxylic acid transport
JWB56_14725	COG0473	3-isopropylmalate dehydrogenase activity
JWB56_14780	COG0583	DNA-binding transcription factor activity
JWB56_14790	COG0625	glutathione transferase activity
JWB56_14795	COG2378	regulation of single-species biofilm formation
JWB56_14800	COG0546	phosphoglycolate phosphatase activity
JWB56_14815	COG1530	ribonuclease E activity
JWB56_14820	COG0318	PFAM AMP-dependent synthetase and ligase
JWB56_14835	COG0583	DNA-binding transcription factor activity
JWB56_14840	COG4221	oxidoreductase activity
JWB56_14845	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JWB56_14855	COG0534	Mate efflux family protein
JWB56_14870	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
JWB56_14895	COG0493	'glutamate synthase
JWB56_14895	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JWB56_14905	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
JWB56_14910	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JWB56_14925	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
JWB56_14935	COG0644	oxidoreductase
JWB56_14935	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
JWB56_14945	COG0425	Belongs to the sulfur carrier protein TusA family
JWB56_14950	COG4535	Mg2 and Co2 transporter CorC
JWB56_14960	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JWB56_14980	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JWB56_14985	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JWB56_14985	COG0475	glutathione-regulated potassium exporter activity
JWB56_15000	COG0484	heat shock protein binding
JWB56_15005	COG0789	Transcriptional regulator
JWB56_15010	COG0598	Magnesium transport protein CorA
JWB56_15025	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JWB56_15030	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JWB56_15035	COG1074	ATP-dependent DNA helicase activity
JWB56_15040	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
JWB56_15060	COG2226	methyltransferase
JWB56_15075	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JWB56_15080	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JWB56_15095	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JWB56_15095	COG2111	Na H antiporter
JWB56_15100	COG1006	Multisubunit Na H antiporter MnhC subunit
JWB56_15105	COG0651	ATP synthesis coupled electron transport
JWB56_15110	COG1863	multisubunit Na H antiporter MnhE subunit
JWB56_15115	COG2212	antiporter activity
JWB56_15120	COG1320	monovalent cation:proton antiporter activity
JWB56_15135	COG0195	Participates in both transcription termination and antitermination
JWB56_15185	COG0237	dephospho-CoA kinase activity
JWB56_15195	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JWB56_15210	COG0497	DNA recombination
JWB56_15220	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JWB56_15250	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JWB56_15250	COG2169	Transcriptional regulator
JWB56_15255	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JWB56_15315	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
JWB56_15330	COG0326	Molecular chaperone. Has ATPase activity
JWB56_15445	COG0546	phosphoglycolate phosphatase activity
JWB56_15450	COG1716	ATPase activity
JWB56_15495	COG0181	hydroxymethylbilane synthase activity
JWB56_15525	COG1538	Outer membrane efflux protein
JWB56_15530	COG0697	spore germination
JWB56_15555	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JWB56_15560	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JWB56_15565	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JWB56_15570	COG0772	Belongs to the SEDS family
JWB56_15595	COG4974	Belongs to the 'phage' integrase family
JWB56_15600	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JWB56_15610	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
JWB56_15620	COG2197	response regulator
JWB56_15635	COG0793	Belongs to the peptidase S41A family
JWB56_15640	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JWB56_15645	COG0795	lipopolysaccharide-transporting ATPase activity
JWB56_15685	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JWB56_15685	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JWB56_15695	COG0004	ammonium transporteR
JWB56_15700	COG0347	Belongs to the P(II) protein family
JWB56_15710	COG0606	chelatase, subunit chli
JWB56_15720	COG0659	secondary active sulfate transmembrane transporter activity
JWB56_15745	COG0789	Transcriptional regulator
JWB56_15750	COG0589	response to stress
JWB56_15760	COG0640	Transcriptional regulator
JWB56_15770	COG0798	PFAM Bile acid sodium symporter
JWB56_15775	COG0431	NADPH-dependent FMN reductase
JWB56_15780	COG0492	ferredoxin-NADP+ reductase activity
JWB56_15785	COG2072	flavoprotein involved in K transport
JWB56_15815	COG0606	chelatase, subunit chli
JWB56_15820	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JWB56_15830	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JWB56_15845	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
JWB56_15860	COG0318	PFAM AMP-dependent synthetase and ligase
JWB56_15870	COG0477	Major facilitator Superfamily
JWB56_15875	COG2860	membrane
JWB56_15880	COG3012	SEC-C Motif Domain Protein
JWB56_15885	COG1253	flavin adenine dinucleotide binding
JWB56_15895	COG0477	Major facilitator Superfamily
JWB56_15905	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JWB56_15940	COG0655	NAD(P)H dehydrogenase (quinone) activity
JWB56_15950	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JWB56_15985	COG1309	transcriptional regulator
JWB56_16020	COG0758	DNA mediated transformation
JWB56_16030	COG0697	spore germination
JWB56_16035	COG1309	transcriptional regulator
JWB56_16050	COG0386	Belongs to the glutathione peroxidase family
JWB56_16115	COG1121	(ABC) transporter
JWB56_16120	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JWB56_16125	COG1280	lysine exporter protein (LysE YggA)
JWB56_16130	COG2837	iron assimilation
JWB56_16135	COG0281	malic enzyme
JWB56_16180	COG0518	GMP synthase (glutamine-hydrolyzing) activity
JWB56_16180	COG0519	Catalyzes the synthesis of GMP from XMP
JWB56_16185	COG4399	Belongs to the UPF0754 family
JWB56_16190	COG2259	Doxx family
JWB56_16195	COG0586	Pfam SNARE associated Golgi protein
JWB56_16210	COG1192	Involved in chromosome partitioning
JWB56_16220	COG0271	Belongs to the BolA IbaG family
JWB56_16240	COG2267	carboxylic ester hydrolase activity
JWB56_16260	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JWB56_16260	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
JWB56_16260	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JWB56_16260	COG3321	synthase
JWB56_16265	COG1960	acyl-CoA dehydrogenase activity
JWB56_16275	COG2197	response regulator
JWB56_16285	COG3916	Acyl-homoserine-lactone synthase
JWB56_16290	COG0477	Major facilitator Superfamily
JWB56_16295	COG1024	Enoyl-CoA hydratase
JWB56_16300	COG1024	Enoyl-CoA hydratase
JWB56_16305	COG1960	acyl-CoA dehydrogenase activity
JWB56_16310	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JWB56_16330	COG1113	amino acid transport
JWB56_16335	COG1113	amino acid transport
JWB56_16340	COG0251	oxidation-reduction process
JWB56_16380	COG0564	pseudouridine synthase activity
JWB56_16425	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JWB56_16440	COG1802	Transcriptional regulator
JWB56_16450	COG1448	Aminotransferase
JWB56_16455	COG0277	FAD linked oxidase domain protein
JWB56_16465	COG2186	Transcriptional regulator
JWB56_16475	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JWB56_16480	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JWB56_16495	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JWB56_16505	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JWB56_16515	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JWB56_16540	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
JWB56_16545	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
JWB56_16550	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
JWB56_16580	COG0728	peptidoglycan biosynthetic process
JWB56_16585	COG3023	N-Acetylmuramoyl-L-alanine amidase
JWB56_16640	COG0546	phosphoglycolate phosphatase activity
JWB56_16645	COG1028	Short-chain dehydrogenase reductase Sdr
JWB56_16665	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JWB56_16670	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JWB56_16675	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JWB56_16680	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JWB56_16685	COG1116	anion transmembrane transporter activity
JWB56_16690	COG1309	transcriptional regulator
JWB56_16695	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JWB56_16705	COG0196	riboflavin kinase activity
JWB56_16710	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JWB56_16720	COG1047	Peptidyl-prolyl cis-trans
JWB56_16760	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JWB56_16765	COG0657	acetylesterase activity
JWB56_16815	COG2951	lytic endotransglycosylase activity
JWB56_16820	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JWB56_16835	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JWB56_16845	COG0671	phosphoesterase, PA-phosphatase related
JWB56_16850	COG0861	Integral membrane protein TerC family
JWB56_16860	COG0754	glutathionylspermidine amidase activity
JWB56_16870	COG0402	S-adenosylhomocysteine deaminase activity
JWB56_16885	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JWB56_16890	COG1230	cation diffusion facilitator family transporter
JWB56_16905	COG0706	membrane insertase activity
JWB56_16930	COG0592	DNA-directed DNA polymerase activity
JWB56_16940	COG0187	DNA topoisomerase II activity
JWB56_16950	COG0586	Pfam SNARE associated Golgi protein
JWB56_16955	COG0488	(ABC) transporter
JWB56_16980	COG0596	Alpha beta hydrolase
JWB56_16985	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
JWB56_16990	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JWB56_17030	COG0733	neurotransmitter:sodium symporter activity
JWB56_17065	COG0583	DNA-binding transcription factor activity
JWB56_17070	COG2233	PERMEase
JWB56_17085	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JWB56_17120	COG2814	Major facilitator Superfamily
JWB56_17125	COG0656	L-ascorbic acid biosynthetic process
JWB56_17130	COG0583	DNA-binding transcription factor activity
JWB56_17145	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JWB56_17150	COG1064	alcohol dehydrogenase
JWB56_17155	COG2818	Glycosylase
JWB56_17170	COG1194	a g-specific adenine glycosylase
JWB56_17190	COG2983	Belongs to the UPF0260 family
JWB56_17195	COG2133	pyrroloquinoline quinone binding
JWB56_17200	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JWB56_17205	COG2116	formate transmembrane transporter activity
JWB56_17225	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JWB56_17230	COG1335	isochorismatase
JWB56_17235	COG0385	Bile acid
JWB56_17240	COG0534	Mate efflux family protein
JWB56_17245	COG1683	Conserved Protein
JWB56_17265	COG0625	glutathione transferase activity
JWB56_17275	COG1113	amino acid transport
JWB56_17285	COG0523	cobalamin synthesis protein
JWB56_17295	COG2188	Transcriptional regulator
JWB56_17325	COG0010	Belongs to the arginase family
JWB56_17340	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
JWB56_17370	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JWB56_17380	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JWB56_17385	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
JWB56_17470	COG0534	Mate efflux family protein
JWB56_17475	COG0436	Aminotransferase
JWB56_17480	COG2733	membrane
JWB56_17495	COG2918	glutathione biosynthetic process
JWB56_17540	COG3150	esterase
JWB56_17550	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
JWB56_17560	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JWB56_17570	COG2233	PERMEase
JWB56_17575	COG2351	hydroxyisourate hydrolase activity
JWB56_17610	COG3706	GGDEF domain
JWB56_17625	COG1393	Belongs to the ArsC family
JWB56_17630	COG0708	Exodeoxyribonuclease III
JWB56_17650	COG0189	ligase activity
JWB56_17670	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
JWB56_17680	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JWB56_17695	COG4942	peptidase
JWB56_17705	COG0508	dehydrogenase complex catalyzes the overall conversion of
JWB56_17715	COG2119	membrane
JWB56_17720	COG4774	siderophore transport
JWB56_17725	COG0426	domain, Protein
JWB56_17725	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JWB56_17750	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JWB56_17770	COG1902	pentaerythritol trinitrate reductase activity
JWB56_17775	COG1519	Transferase
JWB56_17780	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JWB56_17785	COG0668	transmembrane transport
JWB56_17795	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JWB56_17800	COG1335	isochorismatase
JWB56_17805	COG1522	sequence-specific DNA binding
JWB56_17830	COG2198	Histidine kinase
JWB56_17830	COG2205	protein histidine kinase activity
JWB56_17830	COG0784	Response regulator, receiver
JWB56_17835	COG3162	membrane
JWB56_17840	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JWB56_17850	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JWB56_17865	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JWB56_17870	COG1309	transcriptional regulator
JWB56_17890	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JWB56_17890	COG0351	phosphomethylpyrimidine kinase
JWB56_17890	COG0352	thiamine-phosphate diphosphorylase activity
JWB56_17900	COG2814	Major facilitator Superfamily
JWB56_17915	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
JWB56_17925	COG1113	amino acid transport
JWB56_17935	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JWB56_17940	COG1012	belongs to the aldehyde dehydrogenase family
JWB56_17950	COG1335	isochorismatase
JWB56_17980	COG2814	Major facilitator Superfamily
JWB56_17985	COG0583	DNA-binding transcription factor activity
JWB56_18005	COG0667	Aldo Keto reductase
JWB56_18025	COG1733	regulation of RNA biosynthetic process
JWB56_18035	COG1733	regulation of RNA biosynthetic process
JWB56_18040	COG2249	NAD(P)H dehydrogenase (quinone) activity
JWB56_18050	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JWB56_18110	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JWB56_18150	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JWB56_18180	COG0427	acetyl-CoA hydrolase
JWB56_18205	COG0659	secondary active sulfate transmembrane transporter activity
JWB56_18210	COG4221	oxidoreductase activity
JWB56_18215	COG2873	o-acetylhomoserine
JWB56_18220	COG0488	(ABC) transporter
JWB56_18285	COG0833	amino acid
JWB56_18330	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JWB56_18335	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JWB56_18350	COG2226	methyltransferase
JWB56_18400	COG0069	glutamate synthase activity
JWB56_18400	COG0070	glutamate synthase
JWB56_18400	COG0067	glutamate synthase
JWB56_18405	COG0493	'glutamate synthase
JWB56_18415	COG1704	LemA family
JWB56_18420	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
JWB56_18435	COG3307	-O-antigen
JWB56_18455	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JWB56_18470	COG0194	GDP metabolic process
JWB56_18520	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JWB56_18540	COG5380	lipid catabolic process
JWB56_18545	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JWB56_18570	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JWB56_18575	COG0277	FAD linked oxidase domain protein
JWB56_18585	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
JWB56_18590	COG2249	NAD(P)H dehydrogenase (quinone) activity
JWB56_18605	COG1289	transmembrane transporter activity
JWB56_18615	COG0628	permease
JWB56_18620	COG1192	Involved in chromosome partitioning
JWB56_18650	COG0833	amino acid
JWB56_18655	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JWB56_18660	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JWB56_18670	COG1012	belongs to the aldehyde dehydrogenase family
JWB56_18710	COG0583	DNA-binding transcription factor activity
JWB56_18755	COG0517	IMP dehydrogenase activity
JWB56_18760	COG1983	PspC domain protein
JWB56_18770	COG1960	acyl-CoA dehydrogenase activity
JWB56_18785	COG0408	coproporphyrinogen oxidase activity
JWB56_18805	COG0513	Belongs to the DEAD box helicase family
JWB56_18815	COG1127	ABC transporter
JWB56_18820	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
JWB56_18830	COG2854	intermembrane phospholipid transfer
JWB56_18840	COG0598	Magnesium transport protein CorA
JWB56_18850	COG0494	nUDIX hydrolase
JWB56_18855	COG1040	competence protein
JWB56_18860	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JWB56_18880	COG1946	Acyl-CoA thioesterase
JWB56_18885	COG1301	dicarboxylic acid transport
JWB56_18900	COG1959	2 iron, 2 sulfur cluster binding
JWB56_18905	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JWB56_18905	COG1017	nitric oxide dioxygenase activity
JWB56_18910	COG0433	COG0433 Predicted ATPase
JWB56_18915	COG0626	cystathionine gamma-synthase activity
JWB56_19070	COG1960	acyl-CoA dehydrogenase activity
JWB56_19075	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
JWB56_19105	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
JWB56_19110	COG0339	signal peptide processing
JWB56_19115	COG0557	exoribonuclease II activity
JWB56_19165	COG2169	Transcriptional regulator
JWB56_19170	COG0697	spore germination
JWB56_19175	COG1295	ribonuclease BN
JWB56_19210	COG1702	phosphate starvation-inducible protein PhoH
JWB56_19220	COG1196	nuclear chromosome segregation
JWB56_19220	COG0739	heme binding
JWB56_19220	COG0741	lytic transglycosylase activity
JWB56_19250	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
JWB56_19255	COG1183	phosphatidylcholine synthase activity
JWB56_19510	COG2826	transposase and inactivated derivatives, IS30 family
JWB56_19520	COG2826	transposase and inactivated derivatives, IS30 family
JWB56_19540	COG0741	lytic transglycosylase activity
JWB56_19575	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JWB56_19715	COG1525	nuclease
JWB56_19770	COG1475	DNA binding
JWB56_19785	COG3853	Toxic anion resistance protein (TelA)