locus-tag class description NH10_000001 PF00308 Bacterial dnaA protein NH10_000001 PF08299 Bacterial dnaA protein helix-turn-helix NH10_000001 PF11638 DnaA N-terminal domain NH10_000002 PF00712 DNA polymerase III beta subunit, N-terminal domain NH10_000002 PF02767 DNA polymerase III beta subunit, central domain NH10_000002 PF02768 DNA polymerase III beta subunit, C-terminal domain NH10_000003 PF02463 RecF/RecN/SMC N terminal domain NH10_000004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_000004 PF18053 DNA gyrase B subunit insert domain NH10_000004 PF01751 Toprim domain NH10_000004 PF00204 DNA gyrase B NH10_000004 PF00986 DNA gyrase B subunit, carboxyl terminus NH10_000006 PF09335 SNARE associated Golgi protein NH10_000007 PF00005 ABC transporter NH10_000007 PF12848 ABC transporter NH10_000012 PF00144 Beta-lactamase NH10_000017 PF01521 Iron-sulphur cluster biosynthesis NH10_000018 PF00561 alpha/beta hydrolase fold NH10_000019 PF03702 Anhydro-N-acetylmuramic acid kinase NH10_000020 PF00579 tRNA synthetases class I (W and Y) NH10_000023 PF00209 Sodium:neurotransmitter symporter family NH10_000025 PF01029 NusB family NH10_000025 PF01189 16S rRNA methyltransferase RsmB/F NH10_000026 PF00551 Formyl transferase NH10_000026 PF02911 Formyl transferase, C-terminal domain NH10_000027 PF00920 Dehydratase family NH10_000030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_000030 PF03466 LysR substrate binding domain NH10_000031 PF00860 Permease family NH10_000032 PF00311 Phosphoenolpyruvate carboxylase NH10_000033 PF08361 MAATS-type transcriptional repressor, C-terminal region NH10_000033 PF00440 Bacterial regulatory proteins, tetR family NH10_000034 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH10_000035 PF00873 AcrB/AcrD/AcrF family NH10_000037 PF01556 DnaJ C terminal domain NH10_000037 PF00226 DnaJ domain NH10_000037 PF00684 DnaJ central domain NH10_000039 PF01113 Dihydrodipicolinate reductase, N-terminus NH10_000039 PF05173 Dihydrodipicolinate reductase, C-terminus NH10_000041 PF07690 Major Facilitator Superfamily NH10_000042 PF00248 Aldo/keto reductase family NH10_000043 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_000043 PF03466 LysR substrate binding domain NH10_000045 PF00392 Bacterial regulatory proteins, gntR family NH10_000045 PF00155 Aminotransferase class I and II NH10_000046 PF08240 Alcohol dehydrogenase GroES-like domain NH10_000046 PF00107 Zinc-binding dehydrogenase NH10_000047 PF03352 Methyladenine glycosylase NH10_000050 PF00633 Helix-hairpin-helix motif NH10_000050 PF10576 Iron-sulfur binding domain of endonuclease III NH10_000050 PF00730 HhH-GPD superfamily base excision DNA repair protein NH10_000050 PF14815 NUDIX domain NH10_000053 PF07043 Protein of unknown function (DUF1328) NH10_000054 PF03692 Putative zinc- or iron-chelating domain NH10_000055 PF07995 Glucose / Sorbosone dehydrogenase NH10_000056 PF12002 MgsA AAA+ ATPase C terminal NH10_000056 PF16193 AAA C-terminal domain NH10_000056 PF00004 ATPase family associated with various cellular activities (AAA) NH10_000057 PF01226 Formate/nitrite transporter NH10_000059 PF01259 SAICAR synthetase NH10_000061 PF00701 Dihydrodipicolinate synthetase family NH10_000062 PF00857 Isochorismatase family NH10_000063 PF01758 Sodium Bile acid symporter family NH10_000064 PF01554 MatE NH10_000065 PF04463 Protein of unknown function (DUF523) NH10_000066 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NH10_000068 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NH10_000069 PF14497 Glutathione S-transferase, C-terminal domain NH10_000069 PF02798 Glutathione S-transferase, N-terminal domain NH10_000071 PF00324 Amino acid permease NH10_000073 PF02492 CobW/HypB/UreG, nucleotide-binding domain NH10_000073 PF07683 Cobalamin synthesis protein cobW C-terminal domain NH10_000075 PF00392 Bacterial regulatory proteins, gntR family NH10_000075 PF07702 UTRA domain NH10_000076 PF05962 HutD NH10_000077 PF17391 Urocanase N-terminal domain NH10_000077 PF17392 Urocanase C-terminal domain NH10_000077 PF01175 Urocanase Rossmann-like domain NH10_000078 PF00221 Aromatic amino acid lyase NH10_000079 PF00324 Amino acid permease NH10_000080 PF01979 Amidohydrolase family NH10_000081 PF00491 Arginase family NH10_000084 PF01177 Asp/Glu/Hydantoin racemase NH10_000086 PF00145 C-5 cytosine-specific DNA methylase NH10_000087 PF01119 DNA mismatch repair protein, C-terminal domain NH10_000087 PF08676 MutL C terminal dimerisation domain NH10_000089 PF01380 SIS domain NH10_000090 PF14602 Hexapeptide repeat of succinyl-transferase NH10_000090 PF00132 Bacterial transferase hexapeptide (six repeats) NH10_000090 PF12804 MobA-like NTP transferase domain NH10_000091 PF04608 Phosphatidylglycerophosphatase A NH10_000092 PF00586 AIR synthase related protein, N-terminal domain NH10_000092 PF02769 AIR synthase related protein, C-terminal domain NH10_000093 PF01029 NusB family NH10_000094 PF00885 6,7-dimethyl-8-ribityllumazine synthase NH10_000095 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NH10_000095 PF00925 GTP cyclohydrolase II NH10_000100 PF02580 D-Tyr-tRNA(Tyr) deacylase NH10_000101 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NH10_000101 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NH10_000102 PF00581 Rhodanese-like domain NH10_000103 PF02666 Phosphatidylserine decarboxylase NH10_000105 PF11808 Phosphate regulon sensor protein PhoR NH10_000105 PF00989 PAS fold NH10_000105 PF00512 His Kinase A (phospho-acceptor) domain NH10_000105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_000106 PF00486 Transcriptional regulatory protein, C terminal NH10_000106 PF00072 Response regulator receiver domain NH10_000108 PF00106 short chain dehydrogenase NH10_000109 PF01554 MatE NH10_000110 PF00155 Aminotransferase class I and II NH10_000111 PF04286 Protein of unknown function (DUF445) NH10_000114 PF04262 Glutamate-cysteine ligase NH10_000115 PF02600 Disulfide bond formation protein DsbB NH10_000116 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NH10_000116 PF13296 Putative type VI secretion system Rhs element Vgr NH10_000116 PF04717 Type VI secretion system, phage-baseplate injector NH10_000117 PF01471 Putative peptidoglycan binding domain NH10_000117 PF01476 LysM domain NH10_000117 PF01510 N-acetylmuramoyl-L-alanine amidase NH10_000120 PF13737 Transposase DDE domain NH10_000124 PF05728 Uncharacterised protein family (UPF0227) NH10_000125 PF01751 Toprim domain NH10_000125 PF00986 DNA gyrase B subunit, carboxyl terminus NH10_000125 PF00204 DNA gyrase B NH10_000125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_000126 PF04115 Ureidoglycolate lyase NH10_000127 PF03561 Allantoicase repeat NH10_000128 PF01494 FAD binding domain NH10_000130 PF00860 Permease family NH10_000131 PF00576 HIUase/Transthyretin family NH10_000137 PF02683 Cytochrome C biogenesis protein transmembrane region NH10_000137 PF11412 Disulphide bond corrector protein DsbC NH10_000138 PF00990 Diguanylate cyclase, GGDEF domain NH10_000138 PF07694 5TMR of 5TMR-LYT NH10_000139 PF07859 alpha/beta hydrolase fold NH10_000141 PF03960 ArsC family NH10_000142 PF03372 Endonuclease/Exonuclease/phosphatase family NH10_000143 PF00156 Phosphoribosyl transferase domain NH10_000144 PF00593 TonB dependent receptor NH10_000144 PF07715 TonB-dependent Receptor Plug Domain NH10_000146 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NH10_000146 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NH10_000147 PF03033 Glycosyltransferase family 28 N-terminal domain NH10_000147 PF04101 Glycosyltransferase family 28 C-terminal domain NH10_000148 PF08245 Mur ligase middle domain NH10_000148 PF02875 Mur ligase family, glutamate ligase domain NH10_000148 PF01225 Mur ligase family, catalytic domain NH10_000149 PF07478 D-ala D-ala ligase C-terminus NH10_000149 PF01820 D-ala D-ala ligase N-terminus NH10_000150 PF08478 POTRA domain, FtsQ-type NH10_000150 PF03799 Cell division protein FtsQ NH10_000151 PF02491 SHS2 domain inserted in FTSA NH10_000152 PF12327 FtsZ family, C-terminal domain NH10_000152 PF00091 Tubulin/FtsZ family, GTPase domain NH10_000153 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NH10_000155 PF01551 Peptidase family M23 NH10_000156 PF17831 Pyruvate dehydrogenase E1 component middle domain NH10_000156 PF00456 Transketolase, thiamine diphosphate binding domain NH10_000157 PF00364 Biotin-requiring enzyme NH10_000157 PF02817 e3 binding domain NH10_000157 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NH10_000159 PF01169 Uncharacterized protein family UPF0016 NH10_000160 PF07715 TonB-dependent Receptor Plug Domain NH10_000160 PF00593 TonB dependent receptor NH10_000161 PF00258 Flavodoxin NH10_000161 PF01613 Flavin reductase like domain NH10_000162 PF03692 Putative zinc- or iron-chelating domain NH10_000163 PF00571 CBS domain NH10_000163 PF00478 IMP dehydrogenase / GMP reductase domain NH10_000164 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NH10_000164 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NH10_000164 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NH10_000164 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NH10_000165 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NH10_000165 PF01243 Pyridoxamine 5'-phosphate oxidase NH10_000166 PF01368 DHH family NH10_000166 PF02272 DHHA1 domain NH10_000166 PF17768 RecJ OB domain NH10_000168 PF03462 PCRF domain NH10_000168 PF00472 RF-1 domain NH10_000171 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NH10_000172 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NH10_000173 PF04452 RNA methyltransferase NH10_000174 PF00924 Mechanosensitive ion channel NH10_000176 PF13193 AMP-binding enzyme C-terminal domain NH10_000176 PF00501 AMP-binding enzyme NH10_000176 PF16177 Acetyl-coenzyme A synthetase N-terminus NH10_000177 PF00857 Isochorismatase family NH10_000178 PF01037 Lrp/AsnC ligand binding domain NH10_000179 PF00296 Luciferase-like monooxygenase NH10_000180 PF03358 NADPH-dependent FMN reductase NH10_000181 PF00072 Response regulator receiver domain NH10_000181 PF00196 Bacterial regulatory proteins, luxR family NH10_000183 PF00672 HAMP domain NH10_000183 PF01627 Hpt domain NH10_000183 PF00512 His Kinase A (phospho-acceptor) domain NH10_000183 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_000183 PF00072 Response regulator receiver domain NH10_000184 PF04341 Protein of unknown function, DUF485 NH10_000185 PF00474 Sodium:solute symporter family NH10_000187 PF02028 BCCT, betaine/carnitine/choline family transporter NH10_000189 PF00990 Diguanylate cyclase, GGDEF domain NH10_000190 PF17760 UvrA interaction domain NH10_000190 PF00005 ABC transporter NH10_000190 PF17755 UvrA DNA-binding domain NH10_000191 PF00440 Bacterial regulatory proteins, tetR family NH10_000191 PF16925 Tetracyclin repressor-like, C-terminal domain NH10_000192 PF08240 Alcohol dehydrogenase GroES-like domain NH10_000192 PF00107 Zinc-binding dehydrogenase NH10_000194 PF06942 GlpM protein NH10_000195 PF02581 Thiamine monophosphate synthase NH10_000195 PF03070 TENA/THI-4/PQQC family NH10_000195 PF08543 Phosphomethylpyrimidine kinase NH10_000197 PF07690 Major Facilitator Superfamily NH10_000198 PF00436 Single-strand binding protein family NH10_000200 PF03591 AzlC protein NH10_000202 PF00324 Amino acid permease NH10_000203 PF00155 Aminotransferase class I and II NH10_000203 PF00392 Bacterial regulatory proteins, gntR family NH10_000204 PF00202 Aminotransferase class-III NH10_000205 PF00171 Aldehyde dehydrogenase family NH10_000206 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_000207 PF00857 Isochorismatase family NH10_000208 PF02678 Pirin NH10_000208 PF05726 Pirin C-terminal cupin domain NH10_000209 PF01593 Flavin containing amine oxidoreductase NH10_000213 PF07690 Major Facilitator Superfamily NH10_000214 PF03466 LysR substrate binding domain NH10_000214 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_000218 PF00248 Aldo/keto reductase family NH10_000219 PF12833 Helix-turn-helix domain NH10_000219 PF02311 AraC-like ligand binding domain NH10_000222 PF01638 HxlR-like helix-turn-helix NH10_000225 PF01638 HxlR-like helix-turn-helix NH10_000226 PF02525 Flavodoxin-like fold NH10_000228 PF13302 Acetyltransferase (GNAT) domain NH10_000229 PF02705 K+ potassium transporter NH10_000234 PF00230 Major intrinsic protein NH10_000237 PF00977 Histidine biosynthesis protein NH10_000238 PF01636 Phosphotransferase enzyme family NH10_000243 PF00977 Histidine biosynthesis protein NH10_000246 PF00117 Glutamine amidotransferase class-I NH10_000247 PF00475 Imidazoleglycerol-phosphate dehydratase NH10_000249 PF00583 Acetyltransferase (GNAT) family NH10_000250 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NH10_000250 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NH10_000251 PF00512 His Kinase A (phospho-acceptor) domain NH10_000251 PF00672 HAMP domain NH10_000251 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_000252 PF00486 Transcriptional regulatory protein, C terminal NH10_000252 PF00072 Response regulator receiver domain NH10_000253 PF09371 Tex-like protein N-terminal domain NH10_000253 PF00575 S1 RNA binding domain NH10_000253 PF17674 HHH domain NH10_000253 PF16921 Tex protein YqgF-like domain NH10_000254 PF01740 STAS domain NH10_000254 PF00916 Sulfate permease family NH10_000255 PF00106 short chain dehydrogenase NH10_000256 PF01053 Cys/Met metabolism PLP-dependent enzyme NH10_000257 PF00005 ABC transporter NH10_000257 PF12848 ABC transporter NH10_000262 PF00529 HlyD membrane-fusion protein of T1SS NH10_000262 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH10_000263 PF00873 AcrB/AcrD/AcrF family NH10_000264 PF01545 Cation efflux family NH10_000268 PF00324 Amino acid permease NH10_000269 PF00749 tRNA synthetases class I (E and Q), catalytic domain NH10_000272 PF01795 MraW methylase family NH10_000274 PF00905 Penicillin binding protein transpeptidase domain NH10_000274 PF03717 Penicillin-binding Protein dimerisation domain NH10_000275 PF08245 Mur ligase middle domain NH10_000275 PF02875 Mur ligase family, glutamate ligase domain NH10_000275 PF01225 Mur ligase family, catalytic domain NH10_000276 PF08245 Mur ligase middle domain NH10_000276 PF02875 Mur ligase family, glutamate ligase domain NH10_000276 PF01225 Mur ligase family, catalytic domain NH10_000277 PF00953 Glycosyl transferase family 4 NH10_000279 PF13847 Methyltransferase domain NH10_000280 PF00912 Transglycosylase NH10_000280 PF17092 Penicillin-binding protein OB-like domain NH10_000280 PF00905 Penicillin binding protein transpeptidase domain NH10_000281 PF11104 Type IV pilus assembly protein PilM; NH10_000282 PF05137 Fimbrial assembly protein (PilN) NH10_000283 PF04350 Pilus assembly protein, PilO NH10_000285 PF03958 Bacterial type II/III secretion system short domain NH10_000285 PF07660 Secretin and TonB N terminus short domain NH10_000285 PF00263 Bacterial type II and III secretion system protein NH10_000285 PF11741 AMIN domain NH10_000286 PF01202 Shikimate kinase NH10_000287 PF01761 3-dehydroquinate synthase NH10_000289 PF00310 Glutamine amidotransferases class-II NH10_000289 PF04898 Glutamate synthase central domain NH10_000289 PF01645 Conserved region in glutamate synthase NH10_000289 PF01493 GXGXG motif NH10_000290 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NH10_000290 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_000292 PF04011 LemA family NH10_000293 PF04536 TPM domain NH10_000295 PF00114 Pilin (bacterial filament) NH10_000295 PF07963 Prokaryotic N-terminal methylation motif NH10_000296 PF15864 Protein glycosylation ligase NH10_000296 PF04932 O-Antigen ligase NH10_000296 PF11846 Virulence factor membrane-bound polymerase, C-terminal NH10_000297 PF00210 Ferritin-like domain NH10_000298 PF04324 BFD-like [2Fe-2S] binding domain NH10_000299 PF01042 Endoribonuclease L-PSP NH10_000300 PF13291 ACT domain NH10_000300 PF04607 Region found in RelA / SpoT proteins NH10_000300 PF02824 TGS domain NH10_000301 PF01192 RNA polymerase Rpb6 NH10_000302 PF00625 Guanylate kinase NH10_000303 PF02401 LytB protein NH10_000311 PF00886 Ribosomal protein S16 NH10_000312 PF05239 PRC-barrel domain NH10_000312 PF01782 RimM N-terminal domain NH10_000313 PF01746 tRNA (Guanine-1)-methyltransferase NH10_000314 PF01245 Ribosomal protein L19 NH10_000315 PF00561 alpha/beta hydrolase fold NH10_000316 PF03280 Proteobacterial lipase chaperone protein NH10_000317 PF09157 Pseudouridine synthase II TruB, C-terminal NH10_000317 PF01509 TruB family pseudouridylate synthase (N terminal domain) NH10_000317 PF16198 tRNA pseudouridylate synthase B C-terminal domain NH10_000318 PF01925 Sulfite exporter TauE/SafE NH10_000320 PF00892 EamA-like transporter family NH10_000321 PF00892 EamA-like transporter family NH10_000322 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NH10_000322 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NH10_000323 PF02913 FAD linked oxidases, C-terminal domain NH10_000323 PF01565 FAD binding domain NH10_000325 PF03992 Antibiotic biosynthesis monooxygenase NH10_000326 PF02525 Flavodoxin-like fold NH10_000328 PF07690 Major Facilitator Superfamily NH10_000329 PF12805 FUSC-like inner membrane protein yccS NH10_000330 PF00080 Copper/zinc superoxide dismutase (SODC) NH10_000331 PF01594 AI-2E family transporter NH10_000336 PF08241 Methyltransferase domain NH10_000338 PF00324 Amino acid permease NH10_000339 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NH10_000339 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NH10_000340 PF00202 Aminotransferase class-III NH10_000341 PF04958 Arginine N-succinyltransferase beta subunit NH10_000342 PF00171 Aldehyde dehydrogenase family NH10_000343 PF04996 Succinylarginine dihydrolase NH10_000344 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NH10_000347 PF05922 Peptidase inhibitor I9 NH10_000347 PF00082 Subtilase family NH10_000350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_000350 PF03466 LysR substrate binding domain NH10_000351 PF00892 EamA-like transporter family NH10_000355 PF05746 DALR anticodon binding domain NH10_000355 PF02092 Glycyl-tRNA synthetase beta subunit NH10_000356 PF02091 Glycyl-tRNA synthetase alpha subunit NH10_000357 PF07690 Major Facilitator Superfamily NH10_000360 PF00571 CBS domain NH10_000361 PF04024 PspC domain NH10_000363 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_000363 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_000363 PF12806 Acetyl-CoA dehydrogenase C-terminal like NH10_000363 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_000365 PF08501 Shikimate dehydrogenase substrate binding domain NH10_000365 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NH10_000365 PF01488 Shikimate / quinate 5-dehydrogenase NH10_000366 PF01218 Coproporphyrinogen III oxidase NH10_000367 PF00925 GTP cyclohydrolase II NH10_000368 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NH10_000368 PF02779 Transketolase, pyrimidine binding domain NH10_000368 PF02780 Transketolase, C-terminal domain NH10_000369 PF00459 Inositol monophosphatase family NH10_000370 PF00270 DEAD/DEAH box helicase NH10_000370 PF03880 DbpA RNA binding domain NH10_000370 PF12343 Cold shock protein DEAD box A NH10_000370 PF00271 Helicase conserved C-terminal domain NH10_000372 PF00005 ABC transporter NH10_000373 PF02405 Permease MlaE NH10_000375 PF05494 MlaC protein NH10_000377 PF01544 CorA-like Mg2+ transporter protein NH10_000378 PF03641 Possible lysine decarboxylase NH10_000379 PF00293 NUDIX domain NH10_000380 PF00156 Phosphoribosyl transferase domain NH10_000381 PF17191 RecG wedge domain NH10_000381 PF00270 DEAD/DEAH box helicase NH10_000381 PF00271 Helicase conserved C-terminal domain NH10_000384 PF01553 Acyltransferase NH10_000386 PF00375 Sodium:dicarboxylate symporter family NH10_000388 PF01926 50S ribosome-binding GTPase NH10_000389 PF02082 Transcriptional regulator NH10_000390 PF00042 Globin NH10_000390 PF00970 Oxidoreductase FAD-binding domain NH10_000390 PF00175 Oxidoreductase NAD-binding domain NH10_000391 PF05872 Bacterial protein of unknown function (DUF853) NH10_000392 PF01053 Cys/Met metabolism PLP-dependent enzyme NH10_000393 PF00117 Glutamine amidotransferase class-I NH10_000394 PF00338 Ribosomal protein S10p/S20e NH10_000395 PF00297 Ribosomal protein L3 NH10_000396 PF00573 Ribosomal protein L4/L1 family NH10_000397 PF00276 Ribosomal protein L23 NH10_000398 PF00181 Ribosomal Proteins L2, RNA binding domain NH10_000398 PF03947 Ribosomal Proteins L2, C-terminal domain NH10_000399 PF00203 Ribosomal protein S19 NH10_000400 PF00237 Ribosomal protein L22p/L17e NH10_000401 PF00189 Ribosomal protein S3, C-terminal domain NH10_000401 PF07650 KH domain NH10_000402 PF00252 Ribosomal protein L16p/L10e NH10_000403 PF00831 Ribosomal L29 protein NH10_000404 PF00366 Ribosomal protein S17 NH10_000405 PF00238 Ribosomal protein L14p/L23e NH10_000406 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NH10_000406 PF00467 KOW motif NH10_000407 PF00673 ribosomal L5P family C-terminus NH10_000407 PF00281 Ribosomal protein L5 NH10_000408 PF00253 Ribosomal protein S14p/S29e NH10_000409 PF00410 Ribosomal protein S8 NH10_000410 PF00347 Ribosomal protein L6 NH10_000411 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NH10_000412 PF00333 Ribosomal protein S5, N-terminal domain NH10_000412 PF03719 Ribosomal protein S5, C-terminal domain NH10_000413 PF00327 Ribosomal protein L30p/L7e NH10_000414 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NH10_000415 PF00344 SecY translocase NH10_000416 PF00444 Ribosomal protein L36 NH10_000417 PF00416 Ribosomal protein S13/S18 NH10_000418 PF00411 Ribosomal protein S11 NH10_000419 PF00163 Ribosomal protein S4/S9 N-terminal domain NH10_000419 PF01479 S4 domain NH10_000420 PF01000 RNA polymerase Rpb3/RpoA insert domain NH10_000420 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NH10_000420 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NH10_000421 PF01196 Ribosomal protein L17 NH10_000422 PF00743 Flavin-binding monooxygenase-like NH10_000423 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_000423 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_000423 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_000424 PF03937 Flavinator of succinate dehydrogenase NH10_000431 PF09526 Probable metal-binding protein (DUF2387) NH10_000432 PF01432 Peptidase family M3 NH10_000433 PF00773 RNB domain NH10_000433 PF08461 Ribonuclease R winged-helix domain NH10_000433 PF17876 Cold shock domain NH10_000433 PF00575 S1 RNA binding domain NH10_000433 PF08206 Ribonuclease B OB domain NH10_000438 PF01557 Fumarylacetoacetate (FAA) hydrolase family NH10_000439 PF12833 Helix-turn-helix domain NH10_000440 PF00892 EamA-like transporter family NH10_000441 PF03631 Virulence factor BrkB NH10_000442 PF03358 NADPH-dependent FMN reductase NH10_000447 PF02130 Uncharacterized protein family UPF0054 NH10_000448 PF02562 PhoH-like protein NH10_000449 PF04055 Radical SAM superfamily NH10_000449 PF01938 TRAM domain NH10_000449 PF00919 Uncharacterized protein family UPF0004 NH10_000450 PF10145 Phage-related minor tail protein NH10_000450 PF01464 Transglycosylase SLT domain NH10_000450 PF01551 Peptidase family M23 NH10_000452 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NH10_000452 PF00056 lactate/malate dehydrogenase, NAD binding domain NH10_000456 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NH10_000457 PF01066 CDP-alcohol phosphatidyltransferase NH10_000461 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_000461 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_000461 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_000462 PF17932 Tetracyclin repressor-like, C-terminal domain NH10_000462 PF00440 Bacterial regulatory proteins, tetR family NH10_000465 PF01039 Carboxyl transferase domain NH10_000466 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_000466 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_000466 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_000468 PF02785 Biotin carboxylase C-terminal domain NH10_000468 PF00289 Biotin carboxylase, N-terminal domain NH10_000468 PF00364 Biotin-requiring enzyme NH10_000468 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NH10_000470 PF04386 Stringent starvation protein B NH10_000471 PF00043 Glutathione S-transferase, C-terminal domain NH10_000471 PF13417 Glutathione S-transferase, N-terminal domain NH10_000472 PF00380 Ribosomal protein S9/S16 NH10_000473 PF00572 Ribosomal protein L13 NH10_000474 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NH10_000475 PF00398 Ribosomal RNA adenine dimethylase NH10_000476 PF00149 Calcineurin-like phosphoesterase NH10_000480 PF01926 50S ribosome-binding GTPase NH10_000480 PF16360 GTP-binding GTPase Middle Region NH10_000480 PF13167 GTP-binding GTPase N-terminal NH10_000482 PF13091 PLD-like domain NH10_000483 PF00149 Calcineurin-like phosphoesterase NH10_000483 PF10518 TAT (twin-arginine translocation) pathway signal sequence NH10_000484 PF01389 OmpA-like transmembrane domain NH10_000484 PF00691 OmpA family NH10_000485 PF17152 Periplasmic sensor domain NH10_000485 PF00990 Diguanylate cyclase, GGDEF domain NH10_000487 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_000487 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NH10_000489 PF00753 Metallo-beta-lactamase superfamily NH10_000489 PF04273 Putative phosphatase (DUF442) NH10_000490 PF00561 alpha/beta hydrolase fold NH10_000491 PF00085 Thioredoxin NH10_000492 PF03061 Thioesterase superfamily NH10_000494 PF04461 Protein of unknown function (DUF520) NH10_000496 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NH10_000496 PF01266 FAD dependent oxidoreductase NH10_000498 PF03795 YCII-related domain NH10_000499 PF04279 Intracellular septation protein A NH10_000500 PF02811 PHP domain NH10_000501 PF01062 Bestrophin, RFP-TM, chloride channel NH10_000502 PF04002 RadC-like JAB domain NH10_000503 PF02441 Flavoprotein NH10_000503 PF04127 DNA / pantothenate metabolism flavoprotein NH10_000504 PF02355 Protein export membrane protein NH10_000504 PF07549 SecD/SecF GG Motif NH10_000505 PF02355 Protein export membrane protein NH10_000505 PF13721 SecD export protein N-terminal TM region NH10_000505 PF07549 SecD/SecF GG Motif NH10_000506 PF02699 Preprotein translocase subunit NH10_000507 PF01702 Queuine tRNA-ribosyltransferase NH10_000510 PF02547 Queuosine biosynthesis protein NH10_000514 PF00929 Exonuclease NH10_000515 PF00436 Single-strand binding protein family NH10_000524 PF10549 ORF11CD3 domain NH10_000524 PF09669 Phage regulatory protein Rha (Phage_pRha) NH10_000526 PF00533 BRCA1 C Terminus (BRCT) domain NH10_000526 PF01653 NAD-dependent DNA ligase adenylation domain NH10_000526 PF03120 NAD-dependent DNA ligase OB-fold domain NH10_000526 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NH10_000526 PF12826 Helix-hairpin-helix motif NH10_000543 PF01471 Putative peptidoglycan binding domain NH10_000543 PF01510 N-acetylmuramoyl-L-alanine amidase NH10_000553 PF07689 KaiB domain NH10_000553 PF00512 His Kinase A (phospho-acceptor) domain NH10_000553 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_000554 PF03710 Glutamate-ammonia ligase adenylyltransferase NH10_000554 PF08335 GlnD PII-uridylyltransferase NH10_000555 PF01063 Amino-transferase class IV NH10_000558 PF01522 Polysaccharide deacetylase NH10_000559 PF00535 Glycosyl transferase family 2 NH10_000560 PF00534 Glycosyl transferases group 1 NH10_000560 PF13439 Glycosyltransferase Family 4 NH10_000566 PF02938 GAD domain NH10_000566 PF01336 OB-fold nucleic acid binding domain NH10_000566 PF00152 tRNA synthetases class II (D, K and N) NH10_000568 PF07715 TonB-dependent Receptor Plug Domain NH10_000568 PF00593 TonB dependent receptor NH10_000572 PF06146 Phosphate-starvation-inducible E NH10_000573 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_000573 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_000573 PF12806 Acetyl-CoA dehydrogenase C-terminal like NH10_000573 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_000574 PF12806 Acetyl-CoA dehydrogenase C-terminal like NH10_000574 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_000574 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_000574 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_000576 PF00672 HAMP domain NH10_000576 PF00512 His Kinase A (phospho-acceptor) domain NH10_000576 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_000577 PF00486 Transcriptional regulatory protein, C terminal NH10_000577 PF00072 Response regulator receiver domain NH10_000578 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NH10_000582 PF01923 Cobalamin adenosyltransferase NH10_000583 PF00593 TonB dependent receptor NH10_000583 PF07715 TonB-dependent Receptor Plug Domain NH10_000584 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NH10_000585 PF00291 Pyridoxal-phosphate dependent enzyme NH10_000590 PF00290 Tryptophan synthase alpha chain NH10_000591 PF01039 Carboxyl transferase domain NH10_000592 PF02875 Mur ligase family, glutamate ligase domain NH10_000592 PF08245 Mur ligase middle domain NH10_000595 PF00753 Metallo-beta-lactamase superfamily NH10_000596 PF00578 AhpC/TSA family NH10_000596 PF10417 C-terminal domain of 1-Cys peroxiredoxin NH10_000597 PF07516 SecA Wing and Scaffold domain NH10_000597 PF01043 SecA preprotein cross-linking domain NH10_000597 PF07517 SecA DEAD-like domain NH10_000597 PF02810 SEC-C motif NH10_000599 PF00083 Sugar (and other) transporter NH10_000599 PF07690 Major Facilitator Superfamily NH10_000600 PF03006 Haemolysin-III related NH10_000603 PF13673 Acetyltransferase (GNAT) domain NH10_000606 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NH10_000606 PF00378 Enoyl-CoA hydratase/isomerase NH10_000606 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NH10_000607 PF02803 Thiolase, C-terminal domain NH10_000607 PF00108 Thiolase, N-terminal domain NH10_000608 PF12833 Helix-turn-helix domain NH10_000608 PF02311 AraC-like ligand binding domain NH10_000609 PF02515 CoA-transferase family III NH10_000610 PF04966 Carbohydrate-selective porin, OprB family NH10_000611 PF01011 PQQ enzyme repeat NH10_000612 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NH10_000612 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NH10_000614 PF00893 Small Multidrug Resistance protein NH10_000616 PF02803 Thiolase, C-terminal domain NH10_000616 PF00108 Thiolase, N-terminal domain NH10_000618 PF13505 Outer membrane protein beta-barrel domain NH10_000618 PF00691 OmpA family NH10_000620 PF01139 tRNA-splicing ligase RtcB NH10_000621 PF00324 Amino acid permease NH10_000622 PF05175 Methyltransferase small domain NH10_000622 PF08468 Methyltransferase small domain N-terminal NH10_000623 PF00860 Permease family NH10_000624 PF00009 Elongation factor Tu GTP binding domain NH10_000624 PF00679 Elongation factor G C-terminus NH10_000624 PF03144 Elongation factor Tu domain 2 NH10_000625 PF01741 Large-conductance mechanosensitive channel, MscL NH10_000628 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NH10_000628 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NH10_000628 PF06827 Zinc finger found in FPG and IleRS NH10_000629 PF02245 Methylpurine-DNA glycosylase (MPG) NH10_000630 PF07715 TonB-dependent Receptor Plug Domain NH10_000630 PF00593 TonB dependent receptor NH10_000631 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NH10_000634 PF13098 Thioredoxin-like domain NH10_000634 PF10411 Disulfide bond isomerase protein N-terminus NH10_000635 PF01571 Aminomethyltransferase folate-binding domain NH10_000637 PF04343 Protein of unknown function, DUF488 NH10_000638 PF03831 PhnA domain NH10_000638 PF08274 PhnA Zinc-Ribbon NH10_000639 PF07411 Domain of unknown function (DUF1508) NH10_000640 PF03129 Anticodon binding domain NH10_000640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NH10_000640 PF04073 Aminoacyl-tRNA editing domain NH10_000641 PF00873 AcrB/AcrD/AcrF family NH10_000644 PF00072 Response regulator receiver domain NH10_000645 PF00072 Response regulator receiver domain NH10_000646 PF01584 CheW-like domain NH10_000647 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH10_000647 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NH10_000648 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_000648 PF01584 CheW-like domain NH10_000648 PF01627 Hpt domain NH10_000648 PF00072 Response regulator receiver domain NH10_000650 PF04055 Radical SAM superfamily NH10_000650 PF06969 HemN C-terminal domain NH10_000652 PF01546 Peptidase family M20/M25/M40 NH10_000652 PF07687 Peptidase dimerisation domain NH10_000653 PF08085 Entericidin EcnA/B family NH10_000655 PF04304 Protein of unknown function (DUF454) NH10_000656 PF03734 L,D-transpeptidase catalytic domain NH10_000656 PF17969 L,D-transpeptidase C-terminal domain NH10_000658 PF00667 FAD binding domain NH10_000658 PF00258 Flavodoxin NH10_000658 PF00175 Oxidoreductase NAD-binding domain NH10_000660 PF12805 FUSC-like inner membrane protein yccS NH10_000661 PF07690 Major Facilitator Superfamily NH10_000662 PF00881 Nitroreductase family NH10_000664 PF01235 Sodium:alanine symporter family NH10_000665 PF01734 Patatin-like phospholipase NH10_000666 PF00291 Pyridoxal-phosphate dependent enzyme NH10_000666 PF13291 ACT domain NH10_000667 PF05992 SbmA/BacA-like family NH10_000672 PF02637 GatB domain NH10_000672 PF02934 GatB/GatE catalytic domain NH10_000673 PF01425 Amidase NH10_000674 PF02686 Glu-tRNAGln amidotransferase C subunit NH10_000676 PF04085 rod shape-determining protein MreC NH10_000677 PF04093 rod shape-determining protein MreD NH10_000678 PF02545 Maf-like protein NH10_000679 PF00575 S1 RNA binding domain NH10_000679 PF10150 Ribonuclease E/G family NH10_000681 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NH10_000681 PF06974 Protein of unknown function (DUF1298) NH10_000682 PF01507 Phosphoadenosine phosphosulfate reductase family NH10_000685 PF02525 Flavodoxin-like fold NH10_000689 PF02673 Bacitracin resistance protein BacA NH10_000690 PF06719 AraC-type transcriptional regulator N-terminus NH10_000690 PF12833 Helix-turn-helix domain NH10_000691 PF14765 Polyketide synthase dehydratase NH10_000691 PF00550 Phosphopantetheine attachment site NH10_000691 PF08659 KR domain NH10_000691 PF09277 Erythronolide synthase, docking NH10_000691 PF00109 Beta-ketoacyl synthase, N-terminal domain NH10_000691 PF16197 Ketoacyl-synthetase C-terminal extension NH10_000691 PF08990 Erythronolide synthase docking NH10_000691 PF08240 Alcohol dehydrogenase GroES-like domain NH10_000691 PF02801 Beta-ketoacyl synthase, C-terminal domain NH10_000691 PF00698 Acyl transferase domain NH10_000692 PF01965 DJ-1/PfpI family NH10_000705 PF02384 N-6 DNA Methylase NH10_000705 PF12161 HsdM N-terminal domain NH10_000712 PF00772 DnaB-like helicase N terminal domain NH10_000712 PF14528 LAGLIDADG-like domain NH10_000712 PF03796 DnaB-like helicase C terminal domain NH10_000722 PF00149 Calcineurin-like phosphoesterase NH10_000757 PF03869 Arc-like DNA binding domain NH10_000773 PF13356 Arm DNA-binding domain NH10_000773 PF00589 Phage integrase family NH10_000774 PF00324 Amino acid permease NH10_000775 PF04303 PrpF protein NH10_000776 PF00348 Polyprenyl synthetase NH10_000777 PF04237 YjbR NH10_000778 PF01145 SPFH domain / Band 7 family NH10_000780 PF01734 Patatin-like phospholipase NH10_000784 PF08019 Phosphoethanolamine transferase EptA/EptB NH10_000784 PF00884 Sulfatase NH10_000785 PF00072 Response regulator receiver domain NH10_000785 PF00486 Transcriptional regulatory protein, C terminal NH10_000786 PF08521 Two-component sensor kinase N-terminal NH10_000786 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_000786 PF00512 His Kinase A (phospho-acceptor) domain NH10_000788 PF00909 Ammonium Transporter Family NH10_000789 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_000789 PF03466 LysR substrate binding domain NH10_000793 PF08264 Anticodon-binding domain of tRNA NH10_000793 PF00133 tRNA synthetases class I (I, L, M and V) NH10_000793 PF10458 Valyl tRNA synthetase tRNA binding arm NH10_000797 PF01906 Putative heavy-metal-binding NH10_000798 PF01906 Putative heavy-metal-binding NH10_000799 PF02321 Outer membrane efflux protein NH10_000800 PF00873 AcrB/AcrD/AcrF family NH10_000801 PF00529 HlyD membrane-fusion protein of T1SS NH10_000801 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH10_000802 PF01569 PAP2 superfamily NH10_000804 PF00348 Polyprenyl synthetase NH10_000805 PF00829 Ribosomal prokaryotic L21 protein NH10_000806 PF01016 Ribosomal L27 protein NH10_000807 PF03548 Outer membrane lipoprotein carrier protein LolA NH10_000809 PF02403 Seryl-tRNA synthetase N-terminal domain NH10_000809 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NH10_000810 PF10414 Sirohaem synthase dimerisation region NH10_000810 PF14824 Sirohaem biosynthesis protein central NH10_000810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NH10_000811 PF00588 SpoU rRNA Methylase family NH10_000812 PF01638 HxlR-like helix-turn-helix NH10_000813 PF03358 NADPH-dependent FMN reductase NH10_000814 PF13520 Amino acid permease NH10_000815 PF00465 Iron-containing alcohol dehydrogenase NH10_000817 PF03099 Biotin/lipoate A/B protein ligase family NH10_000818 PF04359 Protein of unknown function (DUF493) NH10_000819 PF04545 Sigma-70, region 4 NH10_000819 PF04546 Sigma-70, non-essential region NH10_000819 PF03979 Sigma-70 factor, region 1.1 NH10_000819 PF00140 Sigma-70 factor, region 1.2 NH10_000819 PF04539 Sigma-70 region 3 NH10_000819 PF04542 Sigma-70 region 2 NH10_000822 PF17773 UPF0176 acylphosphatase like domain NH10_000822 PF00581 Rhodanese-like domain NH10_000824 PF00285 Citrate synthase, C-terminal domain NH10_000825 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NH10_000826 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NH10_000827 PF00890 FAD binding domain NH10_000827 PF02910 Fumarate reductase flavoprotein C-term NH10_000828 PF13085 2Fe-2S iron-sulfur cluster binding domain NH10_000829 PF16078 2-oxoglutarate dehydrogenase N-terminus NH10_000829 PF00676 Dehydrogenase E1 component NH10_000829 PF16870 2-oxoglutarate dehydrogenase C-terminal NH10_000829 PF02779 Transketolase, pyrimidine binding domain NH10_000830 PF02817 e3 binding domain NH10_000830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NH10_000830 PF00364 Biotin-requiring enzyme NH10_000831 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_000831 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NH10_000832 PF08442 ATP-grasp domain NH10_000832 PF00549 CoA-ligase NH10_000833 PF02629 CoA binding domain NH10_000833 PF00549 CoA-ligase NH10_000836 PF00579 tRNA synthetases class I (W and Y) NH10_000837 PF05661 Protein of unknown function (DUF808) NH10_000838 PF04228 Putative neutral zinc metallopeptidase NH10_000839 PF00999 Sodium/hydrogen exchanger family NH10_000857 PF09587 Bacterial capsule synthesis protein PGA_cap NH10_000859 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NH10_000860 PF00582 Universal stress protein family NH10_000861 PF00132 Bacterial transferase hexapeptide (six repeats) NH10_000862 PF01272 Transcription elongation factor, GreA/GreB, C-term NH10_000862 PF03449 Transcription elongation factor, N-terminal NH10_000863 PF02142 MGS-like domain NH10_000863 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NH10_000863 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NH10_000864 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NH10_000864 PF00117 Glutamine amidotransferase class-I NH10_000867 PF01985 CRS1 / YhbY (CRM) domain NH10_000868 PF01728 FtsJ-like methyltransferase NH10_000869 PF01434 Peptidase family M41 NH10_000869 PF00004 ATPase family associated with various cellular activities (AAA) NH10_000869 PF06480 FtsH Extracellular NH10_000869 PF17862 AAA+ lid domain NH10_000870 PF00809 Pterin binding enzyme NH10_000873 PF09423 PhoD-like phosphatase NH10_000873 PF16655 PhoD-like phosphatase, N-terminal domain NH10_000874 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NH10_000874 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NH10_000877 PF00083 Sugar (and other) transporter NH10_000878 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NH10_000878 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NH10_000879 PF01266 FAD dependent oxidoreductase NH10_000879 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NH10_000880 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NH10_000880 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NH10_000881 PF00781 Diacylglycerol kinase catalytic domain NH10_000882 PF00149 Calcineurin-like phosphoesterase NH10_000884 PF00166 Chaperonin 10 Kd subunit NH10_000885 PF00118 TCP-1/cpn60 chaperonin family NH10_000886 PF01219 Prokaryotic diacylglycerol kinase NH10_000887 PF00753 Metallo-beta-lactamase superfamily NH10_000888 PF03009 Glycerophosphoryl diester phosphodiesterase family NH10_000889 PF00873 AcrB/AcrD/AcrF family NH10_000891 PF01435 Peptidase family M48 NH10_000892 PF01464 Transglycosylase SLT domain NH10_000893 PF01171 PP-loop family NH10_000895 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH10_000895 PF01464 Transglycosylase SLT domain NH10_000896 PF01272 Transcription elongation factor, GreA/GreB, C-term NH10_000896 PF03449 Transcription elongation factor, N-terminal NH10_000898 PF00501 AMP-binding enzyme NH10_000898 PF00668 Condensation domain NH10_000898 PF00550 Phosphopantetheine attachment site NH10_000898 PF00975 Thioesterase domain NH10_000898 PF13193 AMP-binding enzyme C-terminal domain NH10_000905 PF00881 Nitroreductase family NH10_000908 PF02595 Glycerate kinase family NH10_000909 PF00384 Molybdopterin oxidoreductase NH10_000910 PF02634 FdhD/NarQ family NH10_000911 PF06803 Protein of unknown function (DUF1232) NH10_000912 PF11890 Domain of unknown function (DUF3410) NH10_000912 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NH10_000912 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NH10_000913 PF00152 tRNA synthetases class II (D, K and N) NH10_000915 PF18073 Rubredoxin metal binding domain NH10_000916 PF00324 Amino acid permease NH10_000918 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NH10_000918 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NH10_000919 PF01678 Diaminopimelate epimerase NH10_000920 PF00561 alpha/beta hydrolase fold NH10_000921 PF01810 LysE type translocator NH10_000922 PF02899 Phage integrase, N-terminal SAM-like domain NH10_000922 PF00589 Phage integrase family NH10_000923 PF01012 Electron transfer flavoprotein domain NH10_000924 PF00766 Electron transfer flavoprotein FAD-binding domain NH10_000924 PF01012 Electron transfer flavoprotein domain NH10_000925 PF03989 DNA gyrase C-terminal domain, beta-propeller NH10_000925 PF00521 DNA gyrase/topoisomerase IV, subunit A NH10_000928 PF00535 Glycosyl transferase family 2 NH10_000932 PF13533 Biotin-lipoyl like NH10_000934 PF00266 Aminotransferase class-V NH10_000937 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NH10_000939 PF02687 FtsX-like permease family NH10_000939 PF12704 MacB-like periplasmic core domain NH10_000940 PF00005 ABC transporter NH10_000941 PF00753 Metallo-beta-lactamase superfamily NH10_000941 PF13567 Domain of unknown function (DUF4131) NH10_000941 PF03772 Competence protein NH10_000943 PF01343 Peptidase family S49 NH10_000943 PF06965 Na+/H+ antiporter 1 NH10_000944 PF12697 Alpha/beta hydrolase family NH10_000945 PF00551 Formyl transferase NH10_000946 PF00586 AIR synthase related protein, N-terminal domain NH10_000946 PF02769 AIR synthase related protein, C-terminal domain NH10_000947 PF01594 AI-2E family transporter NH10_000948 PF00308 Bacterial dnaA protein NH10_000948 PF08299 Bacterial dnaA protein helix-turn-helix NH10_000948 PF11638 DnaA N-terminal domain NH10_000954 PF00588 SpoU rRNA Methylase family NH10_000954 PF08032 RNA 2'-O ribose methyltransferase substrate binding NH10_000955 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NH10_000957 PF00691 OmpA family NH10_000958 PF07676 WD40-like Beta Propeller Repeat NH10_000958 PF04052 TolB amino-terminal domain NH10_000960 PF02472 Biopolymer transport protein ExbD/TolR NH10_000961 PF01618 MotA/TolQ/ExbB proton channel family NH10_000962 PF03061 Thioesterase superfamily NH10_000963 PF07687 Peptidase dimerisation domain NH10_000963 PF01546 Peptidase family M20/M25/M40 NH10_000964 PF17864 RuvB AAA lid domain NH10_000964 PF05491 RuvB C-terminal winged helix domain NH10_000964 PF05496 Holliday junction DNA helicase RuvB P-loop domain NH10_000965 PF07499 RuvA, C-terminal domain NH10_000965 PF01330 RuvA N terminal domain NH10_000966 PF01966 HD domain NH10_000967 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NH10_000967 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NH10_000967 PF02769 AIR synthase related protein, C-terminal domain NH10_000968 PF07690 Major Facilitator Superfamily NH10_000970 PF01784 NIF3 (NGG1p interacting factor 3) NH10_000971 PF00378 Enoyl-CoA hydratase/isomerase NH10_000972 PF00293 NUDIX domain NH10_000972 PF01467 Cytidylyltransferase-like NH10_000974 PF00578 AhpC/TSA family NH10_000977 PF06508 Queuosine biosynthesis protein QueC NH10_000979 PF14602 Hexapeptide repeat of succinyl-transferase NH10_000979 PF00132 Bacterial transferase hexapeptide (six repeats) NH10_000979 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NH10_000981 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_000981 PF03466 LysR substrate binding domain NH10_000982 PF12857 TOBE-like domain NH10_000982 PF00005 ABC transporter NH10_000983 PF00528 Binding-protein-dependent transport system inner membrane component NH10_000984 PF00528 Binding-protein-dependent transport system inner membrane component NH10_000987 PF01063 Amino-transferase class IV NH10_000988 PF02618 YceG-like family NH10_000989 PF02223 Thymidylate kinase NH10_000991 PF00890 FAD binding domain NH10_000991 PF02910 Fumarate reductase flavoprotein C-term NH10_000992 PF13180 PDZ domain NH10_000994 PF00679 Elongation factor G C-terminus NH10_000994 PF00009 Elongation factor Tu GTP binding domain NH10_000994 PF03144 Elongation factor Tu domain 2 NH10_000994 PF06421 GTP-binding protein LepA C-terminus NH10_000995 PF10502 Signal peptidase, peptidase S26 NH10_000997 PF00035 Double-stranded RNA binding motif NH10_000997 PF14622 Ribonuclease-III-like NH10_000998 PF07650 KH domain NH10_000998 PF01926 50S ribosome-binding GTPase NH10_001000 PF02565 Recombination protein O C terminal NH10_001000 PF11967 Recombination protein O N terminal NH10_001001 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NH10_001002 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NH10_001003 PF00106 short chain dehydrogenase NH10_001007 PF00155 Aminotransferase class I and II NH10_001009 PF17151 Periplasmic sensor domain NH10_001009 PF00990 Diguanylate cyclase, GGDEF domain NH10_001011 PF00271 Helicase conserved C-terminal domain NH10_001011 PF04851 Type III restriction enzyme, res subunit NH10_001011 PF02151 UvrB/uvrC motif NH10_001011 PF12344 Ultra-violet resistance protein B NH10_001011 PF17757 UvrB interaction domain NH10_001013 PF00892 EamA-like transporter family NH10_001014 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NH10_001014 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NH10_001017 PF01926 50S ribosome-binding GTPase NH10_001017 PF01018 GTP1/OBG NH10_001018 PF00696 Amino acid kinase family NH10_001018 PF01472 PUA domain NH10_001020 PF07759 Protein of unknown function (DUF1615) NH10_001021 PF01207 Dihydrouridine synthase (Dus) NH10_001022 PF03060 Nitronate monooxygenase NH10_001025 PF02350 UDP-N-acetylglucosamine 2-epimerase NH10_001031 PF00875 DNA photolyase NH10_001031 PF03441 FAD binding domain of DNA photolyase NH10_001032 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH10_001033 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_001034 PF07943 Penicillin-binding protein 5, C-terminal domain NH10_001034 PF00768 D-alanyl-D-alanine carboxypeptidase NH10_001036 PF03971 Monomeric isocitrate dehydrogenase NH10_001037 PF00849 RNA pseudouridylate synthase NH10_001038 PF00180 Isocitrate/isopropylmalate dehydrogenase NH10_001042 PF06779 Uncharacterised MFS-type transporter YbfB NH10_001043 PF03466 LysR substrate binding domain NH10_001043 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001044 PF00375 Sodium:dicarboxylate symporter family NH10_001045 PF02567 Phenazine biosynthesis-like protein NH10_001046 PF00675 Insulinase (Peptidase family M16) NH10_001046 PF05193 Peptidase M16 inactive domain NH10_001051 PF01867 CRISPR associated protein Cas1 NH10_001053 PF09611 CRISPR-associated protein (Cas_Csy1) NH10_001054 PF09614 CRISPR-associated protein (Cas_Csy2) NH10_001055 PF09615 CRISPR-associated protein (Cas_Csy3) NH10_001057 PF02581 Thiamine monophosphate synthase NH10_001058 PF00202 Aminotransferase class-III NH10_001060 PF00849 RNA pseudouridylate synthase NH10_001061 PF00271 Helicase conserved C-terminal domain NH10_001061 PF18337 RapA N-terminal Tudor like domain NH10_001061 PF12137 RNA polymerase recycling family C-terminal NH10_001061 PF00176 SNF2 family N-terminal domain NH10_001061 PF18339 RapA N-terminal Tudor like domain 1 NH10_001063 PF00440 Bacterial regulatory proteins, tetR family NH10_001064 PF00111 2Fe-2S iron-sulfur cluster binding domain NH10_001064 PF00970 Oxidoreductase FAD-binding domain NH10_001064 PF00175 Oxidoreductase NAD-binding domain NH10_001065 PF00487 Fatty acid desaturase NH10_001067 PF17754 MftR C-terminal domain NH10_001067 PF00440 Bacterial regulatory proteins, tetR family NH10_001069 PF00202 Aminotransferase class-III NH10_001070 PF00282 Pyridoxal-dependent decarboxylase conserved domain NH10_001071 PF00171 Aldehyde dehydrogenase family NH10_001072 PF01037 Lrp/AsnC ligand binding domain NH10_001073 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NH10_001073 PF00205 Thiamine pyrophosphate enzyme, central domain NH10_001073 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NH10_001074 PF00324 Amino acid permease NH10_001075 PF12849 PBP superfamily domain NH10_001076 PF00528 Binding-protein-dependent transport system inner membrane component NH10_001077 PF00528 Binding-protein-dependent transport system inner membrane component NH10_001078 PF00005 ABC transporter NH10_001079 PF08496 Peptidase family S49 N-terminal NH10_001079 PF01343 Peptidase family S49 NH10_001082 PF08328 Adenylosuccinate lyase C-terminal NH10_001082 PF00206 Lyase NH10_001083 PF04356 Protein of unknown function (DUF489) NH10_001085 PF13344 Haloacid dehalogenase-like hydrolase NH10_001085 PF00293 NUDIX domain NH10_001086 PF00132 Bacterial transferase hexapeptide (six repeats) NH10_001087 PF07943 Penicillin-binding protein 5, C-terminal domain NH10_001087 PF00768 D-alanyl-D-alanine carboxypeptidase NH10_001090 PF01975 Survival protein SurE NH10_001091 PF01476 LysM domain NH10_001091 PF01551 Peptidase family M23 NH10_001092 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001092 PF03466 LysR substrate binding domain NH10_001093 PF05362 Lon protease (S16) C-terminal proteolytic domain NH10_001093 PF13654 AAA domain NH10_001094 PF07690 Major Facilitator Superfamily NH10_001095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NH10_001096 PF13593 SBF-like CPA transporter family (DUF4137) NH10_001097 PF01197 Ribosomal protein L31 NH10_001098 PF12792 CSS motif domain associated with EAL NH10_001098 PF00563 EAL domain NH10_001100 PF04055 Radical SAM superfamily NH10_001101 PF01132 Elongation factor P (EF-P) OB domain NH10_001101 PF08207 Elongation factor P (EF-P) KOW-like domain NH10_001101 PF09285 Elongation factor P, C-terminal NH10_001102 PF13722 5TM C-terminal transporter carbon starvation CstA NH10_001102 PF02554 Carbon starvation protein CstA NH10_001103 PF04328 Selenoprotein, putative NH10_001104 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001104 PF03466 LysR substrate binding domain NH10_001105 PF00557 Metallopeptidase family M24 NH10_001106 PF02028 BCCT, betaine/carnitine/choline family transporter NH10_001107 PF02028 BCCT, betaine/carnitine/choline family transporter NH10_001108 PF00355 Rieske [2Fe-2S] domain NH10_001108 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NH10_001109 PF00171 Aldehyde dehydrogenase family NH10_001110 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_001110 PF18113 Rubredoxin binding C-terminal domain NH10_001111 PF01266 FAD dependent oxidoreductase NH10_001111 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NH10_001115 PF00892 EamA-like transporter family NH10_001117 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NH10_001122 PF17954 Quercetinase C-terminal cupin domain NH10_001122 PF02678 Pirin NH10_001123 PF00291 Pyridoxal-phosphate dependent enzyme NH10_001124 PF08348 YheO-like PAS domain NH10_001124 PF13309 HTH domain NH10_001126 PF00550 Phosphopantetheine attachment site NH10_001126 PF00501 AMP-binding enzyme NH10_001126 PF13193 AMP-binding enzyme C-terminal domain NH10_001126 PF00668 Condensation domain NH10_001127 PF13193 AMP-binding enzyme C-terminal domain NH10_001127 PF00501 AMP-binding enzyme NH10_001127 PF00550 Phosphopantetheine attachment site NH10_001127 PF00975 Thioesterase domain NH10_001127 PF00668 Condensation domain NH10_001130 PF01032 FecCD transport family NH10_001131 PF01032 FecCD transport family NH10_001132 PF00005 ABC transporter NH10_001133 PF01497 Periplasmic binding protein NH10_001134 PF07715 TonB-dependent Receptor Plug Domain NH10_001134 PF00593 TonB dependent receptor NH10_001135 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NH10_001136 PF00501 AMP-binding enzyme NH10_001136 PF00668 Condensation domain NH10_001136 PF00550 Phosphopantetheine attachment site NH10_001137 PF13193 AMP-binding enzyme C-terminal domain NH10_001137 PF00501 AMP-binding enzyme NH10_001138 PF00550 Phosphopantetheine attachment site NH10_001138 PF00857 Isochorismatase family NH10_001139 PF00282 Pyridoxal-dependent decarboxylase conserved domain NH10_001141 PF00664 ABC transporter transmembrane region NH10_001141 PF00005 ABC transporter NH10_001142 PF00005 ABC transporter NH10_001143 PF00975 Thioesterase domain NH10_001145 PF00425 chorismate binding enzyme NH10_001147 PF01208 Uroporphyrinogen decarboxylase (URO-D) NH10_001148 PF05675 Protein of unknown function (DUF817) NH10_001151 PF00144 Beta-lactamase NH10_001152 PF01227 GTP cyclohydrolase I NH10_001153 PF00111 2Fe-2S iron-sulfur cluster binding domain NH10_001153 PF01799 [2Fe-2S] binding domain NH10_001154 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NH10_001154 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NH10_001157 PF00218 Indole-3-glycerol phosphate synthase NH10_001158 PF02885 Glycosyl transferase family, helical bundle domain NH10_001158 PF00591 Glycosyl transferase family, a/b domain NH10_001159 PF07715 TonB-dependent Receptor Plug Domain NH10_001159 PF00593 TonB dependent receptor NH10_001160 PF01433 Peptidase family M1 domain NH10_001160 PF11838 ERAP1-like C-terminal domain NH10_001161 PF00117 Glutamine amidotransferase class-I NH10_001163 PF00854 POT family NH10_001164 PF00120 Glutamine synthetase, catalytic domain NH10_001164 PF03951 Glutamine synthetase, beta-Grasp domain NH10_001165 PF04345 Chorismate lyase NH10_001166 PF01040 UbiA prenyltransferase family NH10_001170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NH10_001170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NH10_001171 PF01784 NIF3 (NGG1p interacting factor 3) NH10_001172 PF13180 PDZ domain NH10_001173 PF01743 Poly A polymerase head domain NH10_001173 PF12627 Probable RNA and SrmB- binding site of polymerase A NH10_001174 PF00390 Malic enzyme, N-terminal domain NH10_001174 PF03949 Malic enzyme, NAD binding domain NH10_001174 PF01515 Phosphate acetyl/butaryl transferase NH10_001175 PF03707 Bacterial signalling protein N terminal repeat NH10_001175 PF00990 Diguanylate cyclase, GGDEF domain NH10_001175 PF00563 EAL domain NH10_001176 PF04452 RNA methyltransferase NH10_001177 PF02219 Methylenetetrahydrofolate reductase NH10_001178 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NH10_001178 PF05221 S-adenosyl-L-homocysteine hydrolase NH10_001181 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_001181 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_001181 PF09317 Domain of unknown function (DUF1974) NH10_001182 PF04055 Radical SAM superfamily NH10_001183 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NH10_001183 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_001186 PF07690 Major Facilitator Superfamily NH10_001188 PF00557 Metallopeptidase family M24 NH10_001189 PF00318 Ribosomal protein S2 NH10_001190 PF00889 Elongation factor TS NH10_001192 PF12833 Helix-turn-helix domain NH10_001196 PF03330 Lytic transglycolase NH10_001196 PF05036 Sporulation related domain NH10_001197 PF13406 Transglycosylase SLT domain NH10_001198 PF01098 Cell cycle protein NH10_001200 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NH10_001200 PF14489 QueF-like protein NH10_001201 PF01061 ABC-2 type transporter NH10_001202 PF00005 ABC transporter NH10_001203 PF00589 Phage integrase family NH10_001211 PF12684 PDDEXK-like domain of unknown function (DUF3799) NH10_001211 PF06630 Enterobacterial exodeoxyribonuclease VIII NH10_001225 PF00772 DnaB-like helicase N terminal domain NH10_001225 PF03796 DnaB-like helicase C terminal domain NH10_001269 PF01476 LysM domain NH10_001269 PF08525 Opacity-associated protein A N-terminal motif NH10_001269 PF01551 Peptidase family M23 NH10_001284 PF00464 Serine hydroxymethyltransferase NH10_001285 PF02321 Outer membrane efflux protein NH10_001286 PF00873 AcrB/AcrD/AcrF family NH10_001287 PF13533 Biotin-lipoyl like NH10_001288 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001288 PF03466 LysR substrate binding domain NH10_001289 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH10_001290 PF00528 Binding-protein-dependent transport system inner membrane component NH10_001291 PF00528 Binding-protein-dependent transport system inner membrane component NH10_001292 PF00005 ABC transporter NH10_001293 PF00005 ABC transporter NH10_001294 PF00893 Small Multidrug Resistance protein NH10_001295 PF00037 4Fe-4S binding domain NH10_001296 PF16325 Peptidase family U32 C-terminal domain NH10_001296 PF01136 Peptidase family U32 NH10_001297 PF00392 Bacterial regulatory proteins, gntR family NH10_001297 PF00155 Aminotransferase class I and II NH10_001298 PF02567 Phenazine biosynthesis-like protein NH10_001299 PF00175 Oxidoreductase NAD-binding domain NH10_001299 PF00970 Oxidoreductase FAD-binding domain NH10_001300 PF01980 tRNA-methyltransferase O NH10_001300 PF18389 TrmO C-terminal domain NH10_001302 PF00437 Type II/IV secretion system protein NH10_001302 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NH10_001304 PF00072 Response regulator receiver domain NH10_001304 PF00486 Transcriptional regulatory protein, C terminal NH10_001305 PF08521 Two-component sensor kinase N-terminal NH10_001305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_001305 PF00512 His Kinase A (phospho-acceptor) domain NH10_001307 PF00293 NUDIX domain NH10_001309 PF14814 Bifunctional transglycosylase second domain NH10_001309 PF00905 Penicillin binding protein transpeptidase domain NH10_001309 PF00912 Transglycosylase NH10_001310 PF01513 ATP-NAD kinase NH10_001311 PF07023 Protein of unknown function (DUF1315) NH10_001312 PF02885 Glycosyl transferase family, helical bundle domain NH10_001312 PF00591 Glycosyl transferase family, a/b domain NH10_001313 PF00375 Sodium:dicarboxylate symporter family NH10_001314 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_001314 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_001314 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_001315 PF00756 Putative esterase NH10_001316 PF01842 ACT domain NH10_001316 PF01817 Chorismate mutase type II NH10_001316 PF00800 Prephenate dehydratase NH10_001317 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NH10_001319 PF07687 Peptidase dimerisation domain NH10_001319 PF01546 Peptidase family M20/M25/M40 NH10_001320 PF00753 Metallo-beta-lactamase superfamily NH10_001322 PF03883 Peroxide stress protein YaaA NH10_001323 PF05690 Thiazole biosynthesis protein ThiG NH10_001325 PF04241 Protein of unknown function (DUF423) NH10_001326 PF00140 Sigma-70 factor, region 1.2 NH10_001326 PF04542 Sigma-70 region 2 NH10_001326 PF04545 Sigma-70, region 4 NH10_001328 PF00313 'Cold-shock' DNA-binding domain NH10_001329 PF00270 DEAD/DEAH box helicase NH10_001329 PF00271 Helicase conserved C-terminal domain NH10_001331 PF00881 Nitroreductase family NH10_001332 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NH10_001332 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NH10_001336 PF01180 Dihydroorotate dehydrogenase NH10_001337 PF02674 Colicin V production protein NH10_001338 PF00156 Phosphoribosyl transferase domain NH10_001341 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NH10_001341 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NH10_001342 PF01435 Peptidase family M48 NH10_001343 PF09424 Yqey-like protein NH10_001344 PF01165 Ribosomal protein S21 NH10_001345 PF00814 Glycoprotease family NH10_001349 PF00069 Protein kinase domain NH10_001350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001350 PF03466 LysR substrate binding domain NH10_001351 PF00202 Aminotransferase class-III NH10_001352 PF00171 Aldehyde dehydrogenase family NH10_001353 PF00324 Amino acid permease NH10_001359 PF04076 Bacterial OB fold (BOF) protein NH10_001364 PF00561 alpha/beta hydrolase fold NH10_001365 PF03616 Sodium/glutamate symporter NH10_001367 PF03466 LysR substrate binding domain NH10_001367 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001368 PF00248 Aldo/keto reductase family NH10_001369 PF00106 short chain dehydrogenase NH10_001372 PF07729 FCD domain NH10_001372 PF00392 Bacterial regulatory proteins, gntR family NH10_001384 PF08946 Osmosensory transporter coiled coil NH10_001384 PF00083 Sugar (and other) transporter NH10_001388 PF04403 Paraquat-inducible protein A NH10_001389 PF02470 MlaD protein NH10_001391 PF00576 HIUase/Transthyretin family NH10_001393 PF00486 Transcriptional regulatory protein, C terminal NH10_001393 PF00072 Response regulator receiver domain NH10_001394 PF00672 HAMP domain NH10_001394 PF00512 His Kinase A (phospho-acceptor) domain NH10_001394 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_001402 PF00512 His Kinase A (phospho-acceptor) domain NH10_001402 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_001402 PF08521 Two-component sensor kinase N-terminal NH10_001403 PF00072 Response regulator receiver domain NH10_001403 PF00486 Transcriptional regulatory protein, C terminal NH10_001407 PF01177 Asp/Glu/Hydantoin racemase NH10_001408 PF00892 EamA-like transporter family NH10_001409 PF07995 Glucose / Sorbosone dehydrogenase NH10_001413 PF00375 Sodium:dicarboxylate symporter family NH10_001415 PF00753 Metallo-beta-lactamase superfamily NH10_001415 PF16123 Hydroxyacylglutathione hydrolase C-terminus NH10_001416 PF00528 Binding-protein-dependent transport system inner membrane component NH10_001417 PF09383 NIL domain NH10_001417 PF00005 ABC transporter NH10_001418 PF03180 NLPA lipoprotein NH10_001419 PF02844 Phosphoribosylglycinamide synthetase, N domain NH10_001419 PF02843 Phosphoribosylglycinamide synthetase, C domain NH10_001419 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NH10_001420 PF02142 MGS-like domain NH10_001420 PF01808 AICARFT/IMPCHase bienzyme NH10_001421 PF02954 Bacterial regulatory protein, Fis family NH10_001425 PF13932 GidA associated domain NH10_001425 PF01134 Glucose inhibited division protein A NH10_001427 PF14403 Circularly permuted ATP-grasp type 2 NH10_001429 PF08379 Bacterial transglutaminase-like N-terminal region NH10_001429 PF01841 Transglutaminase-like superfamily NH10_001431 PF00842 Alanine racemase, C-terminal domain NH10_001431 PF01168 Alanine racemase, N-terminal domain NH10_001432 PF00772 DnaB-like helicase N terminal domain NH10_001432 PF03796 DnaB-like helicase C terminal domain NH10_001433 PF03948 Ribosomal protein L9, C-terminal domain NH10_001433 PF01281 Ribosomal protein L9, N-terminal domain NH10_001434 PF01084 Ribosomal protein S18 NH10_001435 PF01250 Ribosomal protein S6 NH10_001436 PF01040 UbiA prenyltransferase family NH10_001437 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NH10_001438 PF00510 Cytochrome c oxidase subunit III NH10_001439 PF00115 Cytochrome C and Quinol oxidase polypeptide I NH10_001440 PF06481 COX Aromatic Rich Motif NH10_001440 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NH10_001442 PF00391 PEP-utilising enzyme, mobile domain NH10_001442 PF02896 PEP-utilising enzyme, TIM barrel domain NH10_001442 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NH10_001443 PF03618 Kinase/pyrophosphorylase NH10_001445 PF14883 Hypothetical glycosyl hydrolase family 13 NH10_001445 PF01522 Polysaccharide deacetylase NH10_001446 PF00535 Glycosyl transferase family 2 NH10_001447 PF13994 PgaD-like protein NH10_001449 PF00296 Luciferase-like monooxygenase NH10_001452 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001452 PF03466 LysR substrate binding domain NH10_001454 PF03462 PCRF domain NH10_001454 PF00472 RF-1 domain NH10_001455 PF17827 PrmC N-terminal domain NH10_001455 PF13847 Methyltransferase domain NH10_001456 PF00528 Binding-protein-dependent transport system inner membrane component NH10_001457 PF09084 NMT1/THI5 like NH10_001458 PF12833 Helix-turn-helix domain NH10_001459 PF00106 short chain dehydrogenase NH10_001460 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_001460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_001460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_001461 PF13193 AMP-binding enzyme C-terminal domain NH10_001461 PF00501 AMP-binding enzyme NH10_001462 PF01613 Flavin reductase like domain NH10_001463 PF00899 ThiF family NH10_001464 PF03109 ABC1 family NH10_001467 PF03814 Potassium-transporting ATPase A subunit NH10_001469 PF02669 K+-transporting ATPase, c chain NH10_001470 PF13493 Domain of unknown function (DUF4118) NH10_001470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_001470 PF00512 His Kinase A (phospho-acceptor) domain NH10_001470 PF02702 Osmosensitive K+ channel His kinase sensor domain NH10_001471 PF00486 Transcriptional regulatory protein, C terminal NH10_001471 PF00072 Response regulator receiver domain NH10_001472 PF00120 Glutamine synthetase, catalytic domain NH10_001474 PF03232 Ubiquinone biosynthesis protein COQ7 NH10_001475 PF07690 Major Facilitator Superfamily NH10_001476 PF17243 POTRA domain TamA domain 1 NH10_001476 PF01103 Surface antigen NH10_001476 PF07244 Surface antigen variable number repeat NH10_001479 PF00330 Aconitase family (aconitate hydratase) NH10_001479 PF06434 Aconitate hydratase 2 N-terminus NH10_001479 PF11791 Aconitate B N-terminal domain NH10_001481 PF00027 Cyclic nucleotide-binding domain NH10_001481 PF00520 Ion transport protein NH10_001482 PF07690 Major Facilitator Superfamily NH10_001485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001485 PF03466 LysR substrate binding domain NH10_001486 PF04284 Protein of unknown function (DUF441) NH10_001488 PF00849 RNA pseudouridylate synthase NH10_001488 PF01479 S4 domain NH10_001491 PF00849 RNA pseudouridylate synthase NH10_001491 PF01479 S4 domain NH10_001492 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NH10_001493 PF01119 DNA mismatch repair protein, C-terminal domain NH10_001493 PF08676 MutL C terminal dimerisation domain NH10_001495 PF17209 Hfq protein NH10_001497 PF00881 Nitroreductase family NH10_001498 PF00149 Calcineurin-like phosphoesterase NH10_001499 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NH10_001500 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NH10_001500 PF00749 tRNA synthetases class I (E and Q), catalytic domain NH10_001501 PF00958 GMP synthase C terminal domain NH10_001501 PF00117 Glutamine amidotransferase class-I NH10_001501 PF02540 NAD synthase NH10_001502 PF05985 Ethanolamine ammonia-lyase light chain (EutC) NH10_001503 PF06751 Ethanolamine ammonia lyase large subunit (EutB) NH10_001504 PF13520 Amino acid permease NH10_001505 PF00171 Aldehyde dehydrogenase family NH10_001508 PF00465 Iron-containing alcohol dehydrogenase NH10_001509 PF05970 PIF1-like helicase NH10_001509 PF14493 Helix-turn-helix domain NH10_001511 PF02110 Hydroxyethylthiazole kinase family NH10_001514 PF01433 Peptidase family M1 domain NH10_001514 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NH10_001514 PF11940 Domain of unknown function (DUF3458) Ig-like fold NH10_001517 PF00577 Outer membrane usher protein NH10_001517 PF13954 PapC N-terminal domain NH10_001517 PF13953 PapC C-terminal domain NH10_001522 PF01817 Chorismate mutase type II NH10_001523 PF01037 Lrp/AsnC ligand binding domain NH10_001525 PF02224 Cytidylate kinase NH10_001528 PF00440 Bacterial regulatory proteins, tetR family NH10_001529 PF07715 TonB-dependent Receptor Plug Domain NH10_001529 PF00593 TonB dependent receptor NH10_001530 PF00924 Mechanosensitive ion channel NH10_001536 PF07715 TonB-dependent Receptor Plug Domain NH10_001536 PF00593 TonB dependent receptor NH10_001540 PF00005 ABC transporter NH10_001540 PF12848 ABC transporter NH10_001541 PF00582 Universal stress protein family NH10_001545 PF00689 Cation transporting ATPase, C-terminus NH10_001545 PF00690 Cation transporter/ATPase, N-terminus NH10_001546 PF02308 MgtC family NH10_001547 PF03594 Benzoate membrane transport protein NH10_001548 PF01037 Lrp/AsnC ligand binding domain NH10_001549 PF01810 LysE type translocator NH10_001550 PF00923 Transaldolase/Fructose-6-phosphate aldolase NH10_001551 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001551 PF03466 LysR substrate binding domain NH10_001553 PF00108 Thiolase, N-terminal domain NH10_001553 PF02803 Thiolase, C-terminal domain NH10_001555 PF01575 MaoC like domain NH10_001556 PF00144 Beta-lactamase NH10_001558 PF07690 Major Facilitator Superfamily NH10_001559 PF12170 DNA polymerase III tau subunit V interacting with alpha NH10_001559 PF12169 DNA polymerase III subunits gamma and tau domain III NH10_001559 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NH10_001561 PF05506 Domain of unknown function (DUF756) NH10_001561 PF04185 Phosphoesterase family NH10_001562 PF03061 Thioesterase superfamily NH10_001563 PF00465 Iron-containing alcohol dehydrogenase NH10_001565 PF01451 Low molecular weight phosphotyrosine protein phosphatase NH10_001566 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NH10_001566 PF01565 FAD binding domain NH10_001569 PF01645 Conserved region in glutamate synthase NH10_001573 PF12832 MFS_1 like family NH10_001575 PF02785 Biotin carboxylase C-terminal domain NH10_001575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NH10_001575 PF00289 Biotin carboxylase, N-terminal domain NH10_001576 PF00364 Biotin-requiring enzyme NH10_001577 PF01220 Dehydroquinase class II NH10_001578 PF13438 Domain of unknown function (DUF4113) NH10_001578 PF00817 impB/mucB/samB family NH10_001578 PF11799 impB/mucB/samB family C-terminal domain NH10_001579 PF00005 ABC transporter NH10_001580 PF00072 Response regulator receiver domain NH10_001580 PF00486 Transcriptional regulatory protein, C terminal NH10_001582 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_001582 PF13806 Rieske-like [2Fe-2S] domain NH10_001582 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NH10_001582 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NH10_001582 PF04324 BFD-like [2Fe-2S] binding domain NH10_001582 PF18267 Rubredoxin NAD+ reductase C-terminal domain NH10_001583 PF18267 Rubredoxin NAD+ reductase C-terminal domain NH10_001583 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NH10_001583 PF04324 BFD-like [2Fe-2S] binding domain NH10_001583 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NH10_001583 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_001584 PF01568 Molydopterin dinucleotide binding domain NH10_001584 PF04324 BFD-like [2Fe-2S] binding domain NH10_001584 PF00384 Molybdopterin oxidoreductase NH10_001584 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NH10_001585 PF12804 MobA-like NTP transferase domain NH10_001586 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NH10_001586 PF01568 Molydopterin dinucleotide binding domain NH10_001586 PF00384 Molybdopterin oxidoreductase NH10_001587 PF06463 Molybdenum Cofactor Synthesis C NH10_001587 PF04055 Radical SAM superfamily NH10_001589 PF02391 MoaE protein NH10_001590 PF00994 Probable molybdopterin binding domain NH10_001590 PF01967 MoaC family NH10_001591 PF03454 MoeA C-terminal region (domain IV) NH10_001591 PF03453 MoeA N-terminal region (domain I and II) NH10_001591 PF00994 Probable molybdopterin binding domain NH10_001592 PF01638 HxlR-like helix-turn-helix NH10_001593 PF00392 Bacterial regulatory proteins, gntR family NH10_001593 PF00155 Aminotransferase class I and II NH10_001594 PF00892 EamA-like transporter family NH10_001598 PF02635 DsrE/DsrF-like family NH10_001599 PF16363 GDP-mannose 4,6 dehydratase NH10_001600 PF10415 Fumarase C C-terminus NH10_001600 PF00206 Lyase NH10_001604 PF01266 FAD dependent oxidoreductase NH10_001607 PF01266 FAD dependent oxidoreductase NH10_001609 PF02542 YgbB family NH10_001611 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NH10_001611 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NH10_001612 PF00440 Bacterial regulatory proteins, tetR family NH10_001613 PF02954 Bacterial regulatory protein, Fis family NH10_001613 PF00072 Response regulator receiver domain NH10_001613 PF00158 Sigma-54 interaction domain NH10_001614 PF00512 His Kinase A (phospho-acceptor) domain NH10_001614 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_001614 PF00989 PAS fold NH10_001615 PF04055 Radical SAM superfamily NH10_001615 PF18693 TRAM domain NH10_001615 PF00919 Uncharacterized protein family UPF0004 NH10_001616 PF00696 Amino acid kinase family NH10_001617 PF01765 Ribosome recycling factor NH10_001618 PF01255 Putative undecaprenyl diphosphate synthase NH10_001620 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NH10_001620 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NH10_001620 PF13288 DXP reductoisomerase C-terminal domain NH10_001621 PF13180 PDZ domain NH10_001621 PF17820 PDZ domain NH10_001621 PF02163 Peptidase family M50 NH10_001622 PF07244 Surface antigen variable number repeat NH10_001622 PF01103 Surface antigen NH10_001624 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NH10_001624 PF00132 Bacterial transferase hexapeptide (six repeats) NH10_001625 PF07977 FabA-like domain NH10_001626 PF00132 Bacterial transferase hexapeptide (six repeats) NH10_001626 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NH10_001628 PF02631 RecX family NH10_001629 PF00154 recA bacterial DNA recombination protein NH10_001630 PF01479 S4 domain NH10_001631 PF13419 Haloacid dehalogenase-like hydrolase NH10_001636 PF01037 Lrp/AsnC ligand binding domain NH10_001637 PF00266 Aminotransferase class-V NH10_001638 PF00324 Amino acid permease NH10_001640 PF00082 Subtilase family NH10_001640 PF05922 Peptidase inhibitor I9 NH10_001641 PF00916 Sulfate permease family NH10_001641 PF01740 STAS domain NH10_001642 PF02586 SOS response associated peptidase (SRAP) NH10_001643 PF07995 Glucose / Sorbosone dehydrogenase NH10_001645 PF00990 Diguanylate cyclase, GGDEF domain NH10_001645 PF00563 EAL domain NH10_001645 PF03707 Bacterial signalling protein N terminal repeat NH10_001649 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NH10_001649 PF02378 Phosphotransferase system, EIIC NH10_001650 PF00294 pfkB family carbohydrate kinase NH10_001651 PF00381 PTS HPr component phosphorylation site NH10_001651 PF05524 PEP-utilising enzyme, N-terminal NH10_001651 PF00391 PEP-utilising enzyme, mobile domain NH10_001651 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NH10_001651 PF02896 PEP-utilising enzyme, TIM barrel domain NH10_001656 PF05525 Branched-chain amino acid transport protein NH10_001657 PF00557 Metallopeptidase family M24 NH10_001658 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001658 PF03466 LysR substrate binding domain NH10_001660 PF00462 Glutaredoxin NH10_001661 PF00202 Aminotransferase class-III NH10_001662 PF00478 IMP dehydrogenase / GMP reductase domain NH10_001662 PF00571 CBS domain NH10_001667 PF02881 SRP54-type protein, helical bundle domain NH10_001667 PF00448 SRP54-type protein, GTPase domain NH10_001669 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NH10_001671 PF08173 Membrane bound YbgT-like protein NH10_001672 PF02322 Cytochrome bd terminal oxidase subunit II NH10_001673 PF01654 Cytochrome bd terminal oxidase subunit I NH10_001675 PF07290 Protein of unknown function (DUF1449) NH10_001677 PF00294 pfkB family carbohydrate kinase NH10_001678 PF07715 TonB-dependent Receptor Plug Domain NH10_001678 PF00593 TonB dependent receptor NH10_001679 PF08367 Peptidase M16C associated NH10_001679 PF00675 Insulinase (Peptidase family M16) NH10_001679 PF05193 Peptidase M16 inactive domain NH10_001680 PF02253 Phospholipase A1 NH10_001681 PF02386 Cation transport protein NH10_001682 PF02254 TrkA-N domain NH10_001682 PF02080 TrkA-C domain NH10_001683 PF00585 C-terminal regulatory domain of Threonine dehydratase NH10_001683 PF00291 Pyridoxal-phosphate dependent enzyme NH10_001684 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NH10_001687 PF01118 Semialdehyde dehydrogenase, NAD binding domain NH10_001687 PF02774 Semialdehyde dehydrogenase, dimerisation domain NH10_001689 PF02617 ATP-dependent Clp protease adaptor protein ClpS NH10_001690 PF10431 C-terminal, D2-small domain, of ClpB protein NH10_001690 PF00004 ATPase family associated with various cellular activities (AAA) NH10_001690 PF17871 AAA lid domain NH10_001690 PF02861 Clp amino terminal domain, pathogenicity island component NH10_001690 PF07724 AAA domain (Cdc48 subfamily) NH10_001691 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NH10_001692 PF00793 DAHP synthetase I family NH10_001695 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_001695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NH10_001701 PF00117 Glutamine amidotransferase class-I NH10_001701 PF06418 CTP synthase N-terminus NH10_001702 PF00793 DAHP synthetase I family NH10_001703 PF00113 Enolase, C-terminal TIM barrel domain NH10_001703 PF03952 Enolase, N-terminal domain NH10_001704 PF04239 Protein of unknown function (DUF421) NH10_001705 PF04977 Septum formation initiator NH10_001706 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NH10_001707 PF01144 Coenzyme A transferase NH10_001708 PF01144 Coenzyme A transferase NH10_001709 PF02803 Thiolase, C-terminal domain NH10_001709 PF00108 Thiolase, N-terminal domain NH10_001710 PF10397 Adenylosuccinate lyase C-terminus NH10_001710 PF00206 Lyase NH10_001711 PF00561 alpha/beta hydrolase fold NH10_001712 PF07690 Major Facilitator Superfamily NH10_001713 PF02627 Carboxymuconolactone decarboxylase family NH10_001714 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NH10_001714 PF00775 Dioxygenase NH10_001715 PF00775 Dioxygenase NH10_001716 PF01487 Type I 3-dehydroquinase NH10_001717 PF05048 Periplasmic copper-binding protein (NosD) NH10_001718 PF04966 Carbohydrate-selective porin, OprB family NH10_001719 PF13360 PQQ-like domain NH10_001719 PF01011 PQQ enzyme repeat NH10_001721 PF04143 Sulphur transport NH10_001723 PF00753 Metallo-beta-lactamase superfamily NH10_001724 PF09339 IclR helix-turn-helix domain NH10_001724 PF01614 Bacterial transcriptional regulator NH10_001725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001725 PF03466 LysR substrate binding domain NH10_001726 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_001726 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_001726 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_001729 PF00106 short chain dehydrogenase NH10_001731 PF07690 Major Facilitator Superfamily NH10_001733 PF01425 Amidase NH10_001734 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NH10_001737 PF00355 Rieske [2Fe-2S] domain NH10_001737 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NH10_001740 PF00111 2Fe-2S iron-sulfur cluster binding domain NH10_001740 PF00175 Oxidoreductase NAD-binding domain NH10_001741 PF01613 Flavin reductase like domain NH10_001742 PF02311 AraC-like ligand binding domain NH10_001742 PF12833 Helix-turn-helix domain NH10_001743 PF01179 Copper amine oxidase, enzyme domain NH10_001743 PF02727 Copper amine oxidase, N2 domain NH10_001743 PF02728 Copper amine oxidase, N3 domain NH10_001743 PF07833 Copper amine oxidase N-terminal domain NH10_001745 PF00171 Aldehyde dehydrogenase family NH10_001746 PF01804 Penicillin amidase NH10_001747 PF12146 Serine aminopeptidase, S33 NH10_001748 PF02803 Thiolase, C-terminal domain NH10_001748 PF00108 Thiolase, N-terminal domain NH10_001749 PF01144 Coenzyme A transferase NH10_001750 PF01144 Coenzyme A transferase NH10_001751 PF04444 Catechol dioxygenase N terminus NH10_001751 PF00775 Dioxygenase NH10_001752 PF02426 Muconolactone delta-isomerase NH10_001753 PF13378 Enolase C-terminal domain-like NH10_001753 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NH10_001754 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001754 PF03466 LysR substrate binding domain NH10_001756 PF07729 FCD domain NH10_001756 PF00392 Bacterial regulatory proteins, gntR family NH10_001757 PF00920 Dehydratase family NH10_001758 PF07690 Major Facilitator Superfamily NH10_001760 PF00171 Aldehyde dehydrogenase family NH10_001762 PF00561 alpha/beta hydrolase fold NH10_001763 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_001763 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NH10_001764 PF00106 short chain dehydrogenase NH10_001766 PF09278 MerR, DNA binding NH10_001766 PF00376 MerR family regulatory protein NH10_001768 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_001770 PF12706 Beta-lactamase superfamily domain NH10_001771 PF08359 YsiA-like protein, C-terminal region NH10_001771 PF00440 Bacterial regulatory proteins, tetR family NH10_001772 PF12833 Helix-turn-helix domain NH10_001772 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NH10_001773 PF00106 short chain dehydrogenase NH10_001774 PF06314 Acetoacetate decarboxylase (ADC) NH10_001776 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NH10_001778 PF07995 Glucose / Sorbosone dehydrogenase NH10_001781 PF00857 Isochorismatase family NH10_001782 PF03466 LysR substrate binding domain NH10_001782 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001783 PF07995 Glucose / Sorbosone dehydrogenase NH10_001784 PF00999 Sodium/hydrogen exchanger family NH10_001784 PF02254 TrkA-N domain NH10_001786 PF01546 Peptidase family M20/M25/M40 NH10_001786 PF07687 Peptidase dimerisation domain NH10_001796 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) NH10_001797 PF07690 Major Facilitator Superfamily NH10_001798 PF04909 Amidohydrolase NH10_001800 PF00392 Bacterial regulatory proteins, gntR family NH10_001800 PF07702 UTRA domain NH10_001801 PF08450 SMP-30/Gluconolactonase/LRE-like region NH10_001803 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001803 PF03466 LysR substrate binding domain NH10_001806 PF00529 HlyD membrane-fusion protein of T1SS NH10_001806 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH10_001809 PF00171 Aldehyde dehydrogenase family NH10_001810 PF00920 Dehydratase family NH10_001812 PF03466 LysR substrate binding domain NH10_001812 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001813 PF01370 NAD dependent epimerase/dehydratase family NH10_001814 PF07690 Major Facilitator Superfamily NH10_001815 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NH10_001815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NH10_001816 PF06719 AraC-type transcriptional regulator N-terminus NH10_001816 PF12833 Helix-turn-helix domain NH10_001817 PF14572 Phosphoribosyl synthetase-associated domain NH10_001817 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NH10_001818 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NH10_001822 PF03472 Autoinducer binding domain NH10_001822 PF00196 Bacterial regulatory proteins, luxR family NH10_001823 PF01425 Amidase NH10_001824 PF13533 Biotin-lipoyl like NH10_001825 PF07690 Major Facilitator Superfamily NH10_001830 PF01975 Survival protein SurE NH10_001832 PF13291 ACT domain NH10_001832 PF04607 Region found in RelA / SpoT proteins NH10_001832 PF02824 TGS domain NH10_001833 PF00271 Helicase conserved C-terminal domain NH10_001833 PF04851 Type III restriction enzyme, res subunit NH10_001833 PF02151 UvrB/uvrC motif NH10_001833 PF12344 Ultra-violet resistance protein B NH10_001833 PF17757 UvrB interaction domain NH10_001838 PF13673 Acetyltransferase (GNAT) domain NH10_001839 PF12146 Serine aminopeptidase, S33 NH10_001840 PF03466 LysR substrate binding domain NH10_001840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001843 PF12146 Serine aminopeptidase, S33 NH10_001844 PF02311 AraC-like ligand binding domain NH10_001844 PF12833 Helix-turn-helix domain NH10_001846 PF16527 Two-component sensor protein CpxA, periplasmic domain NH10_001846 PF00672 HAMP domain NH10_001846 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_001846 PF00512 His Kinase A (phospho-acceptor) domain NH10_001847 PF00072 Response regulator receiver domain NH10_001847 PF00486 Transcriptional regulatory protein, C terminal NH10_001848 PF00529 HlyD membrane-fusion protein of T1SS NH10_001848 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH10_001849 PF00873 AcrB/AcrD/AcrF family NH10_001850 PF02321 Outer membrane efflux protein NH10_001851 PF12146 Serine aminopeptidase, S33 NH10_001852 PF00743 Flavin-binding monooxygenase-like NH10_001854 PF01266 FAD dependent oxidoreductase NH10_001927 PF16970 Type-1 fimbrial protein, A NH10_001928 PF02753 Pili assembly chaperone PapD, C-terminal domain NH10_001928 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NH10_001929 PF13953 PapC C-terminal domain NH10_001929 PF00577 Outer membrane usher protein NH10_001929 PF13954 PapC N-terminal domain NH10_001932 PF00107 Zinc-binding dehydrogenase NH10_001932 PF08240 Alcohol dehydrogenase GroES-like domain NH10_001934 PF00199 Catalase NH10_001937 PF13091 PLD-like domain NH10_001941 PF01244 Membrane dipeptidase (Peptidase family M19) NH10_001942 PF04055 Radical SAM superfamily NH10_001942 PF13186 Iron-sulfur cluster-binding domain NH10_001943 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NH10_001944 PF03070 TENA/THI-4/PQQC family NH10_001945 PF12706 Beta-lactamase superfamily domain NH10_001946 PF13090 Polyphosphate kinase C-terminal domain 2 NH10_001946 PF17941 Polyphosphate kinase C-terminal domain 1 NH10_001946 PF02503 Polyphosphate kinase middle domain NH10_001946 PF13089 Polyphosphate kinase N-terminal domain NH10_001947 PF00149 Calcineurin-like phosphoesterase NH10_001949 PF00550 Phosphopantetheine attachment site NH10_001949 PF00857 Isochorismatase family NH10_001950 PF00106 short chain dehydrogenase NH10_001951 PF03459 TOBE domain NH10_001951 PF00005 ABC transporter NH10_001952 PF00528 Binding-protein-dependent transport system inner membrane component NH10_001954 PF03459 TOBE domain NH10_001954 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001955 PF00355 Rieske [2Fe-2S] domain NH10_001955 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NH10_001956 PF00866 Ring hydroxylating beta subunit NH10_001957 PF00111 2Fe-2S iron-sulfur cluster binding domain NH10_001957 PF00970 Oxidoreductase FAD-binding domain NH10_001957 PF00175 Oxidoreductase NAD-binding domain NH10_001958 PF14525 AraC-binding-like domain NH10_001958 PF12833 Helix-turn-helix domain NH10_001960 PF01613 Flavin reductase like domain NH10_001963 PF01738 Dienelactone hydrolase family NH10_001964 PF07690 Major Facilitator Superfamily NH10_001965 PF12833 Helix-turn-helix domain NH10_001965 PF06719 AraC-type transcriptional regulator N-terminus NH10_001969 PF03466 LysR substrate binding domain NH10_001969 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001970 PF01144 Coenzyme A transferase NH10_001971 PF01144 Coenzyme A transferase NH10_001972 PF02667 Short chain fatty acid transporter NH10_001973 PF02803 Thiolase, C-terminal domain NH10_001973 PF00108 Thiolase, N-terminal domain NH10_001974 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001974 PF03466 LysR substrate binding domain NH10_001975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_001975 PF03466 LysR substrate binding domain NH10_001978 PF00206 Lyase NH10_001978 PF10415 Fumarase C C-terminus NH10_001979 PF07715 TonB-dependent Receptor Plug Domain NH10_001979 PF00593 TonB dependent receptor NH10_001980 PF00083 Sugar (and other) transporter NH10_001983 PF00005 ABC transporter NH10_001984 PF00528 Binding-protein-dependent transport system inner membrane component NH10_001985 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NH10_001988 PF07702 UTRA domain NH10_001988 PF00392 Bacterial regulatory proteins, gntR family NH10_001990 PF02525 Flavodoxin-like fold NH10_001991 PF01638 HxlR-like helix-turn-helix NH10_001992 PF06445 GyrI-like small molecule binding domain NH10_001992 PF12833 Helix-turn-helix domain NH10_001995 PF01925 Sulfite exporter TauE/SafE NH10_001996 PF00753 Metallo-beta-lactamase superfamily NH10_001996 PF04273 Putative phosphatase (DUF442) NH10_001997 PF04273 Putative phosphatase (DUF442) NH10_001997 PF00753 Metallo-beta-lactamase superfamily NH10_001998 PF02954 Bacterial regulatory protein, Fis family NH10_001998 PF00072 Response regulator receiver domain NH10_001998 PF00158 Sigma-54 interaction domain NH10_001999 PF01062 Bestrophin, RFP-TM, chloride channel NH10_002000 PF08240 Alcohol dehydrogenase GroES-like domain NH10_002000 PF00107 Zinc-binding dehydrogenase NH10_002001 PF00106 short chain dehydrogenase NH10_002002 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NH10_002002 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_002003 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NH10_002003 PF02817 e3 binding domain NH10_002003 PF00364 Biotin-requiring enzyme NH10_002004 PF02779 Transketolase, pyrimidine binding domain NH10_002004 PF02780 Transketolase, C-terminal domain NH10_002005 PF00676 Dehydrogenase E1 component NH10_002006 PF04055 Radical SAM superfamily NH10_002009 PF08448 PAS fold NH10_002009 PF00990 Diguanylate cyclase, GGDEF domain NH10_002010 PF01264 Chorismate synthase NH10_002011 PF05175 Methyltransferase small domain NH10_002012 PF00291 Pyridoxal-phosphate dependent enzyme NH10_002014 PF00004 ATPase family associated with various cellular activities (AAA) NH10_002014 PF17862 AAA+ lid domain NH10_002014 PF01434 Peptidase family M41 NH10_002016 PF05166 YcgL domain NH10_002020 PF01612 3'-5' exonuclease NH10_002020 PF00570 HRDC domain NH10_002021 PF02132 RecR protein NH10_002021 PF13662 Toprim domain NH10_002022 PF02575 YbaB/EbfC DNA-binding family NH10_002024 PF01053 Cys/Met metabolism PLP-dependent enzyme NH10_002025 PF00561 alpha/beta hydrolase fold NH10_002026 PF08241 Methyltransferase domain NH10_002032 PF01230 HIT domain NH10_002037 PF02684 Lipid-A-disaccharide synthetase NH10_002038 PF00593 TonB dependent receptor NH10_002038 PF07715 TonB-dependent Receptor Plug Domain NH10_002042 PF01925 Sulfite exporter TauE/SafE NH10_002043 PF00793 DAHP synthetase I family NH10_002044 PF02654 Cobalamin-5-phosphate synthase NH10_002046 PF00300 Histidine phosphatase superfamily (branch 1) NH10_002047 PF02277 Phosphoribosyltransferase NH10_002048 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NH10_002050 PF13419 Haloacid dehalogenase-like hydrolase NH10_002055 PF07715 TonB-dependent Receptor Plug Domain NH10_002055 PF00593 TonB dependent receptor NH10_002056 PF03737 Aldolase/RraA NH10_002058 PF04183 IucA / IucC family NH10_002058 PF06276 Ferric iron reductase FhuF-like transporter NH10_002059 PF06276 Ferric iron reductase FhuF-like transporter NH10_002059 PF04183 IucA / IucC family NH10_002060 PF07690 Major Facilitator Superfamily NH10_002061 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NH10_002062 PF06276 Ferric iron reductase FhuF-like transporter NH10_002062 PF04183 IucA / IucC family NH10_002063 PF04073 Aminoacyl-tRNA editing domain NH10_002065 PF03109 ABC1 family NH10_002066 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_002066 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_002066 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_002067 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_002067 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_002067 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_002068 PF00487 Fatty acid desaturase NH10_002069 PF12852 Cupin NH10_002069 PF12833 Helix-turn-helix domain NH10_002070 PF00639 PPIC-type PPIASE domain NH10_002070 PF09312 SurA N-terminal domain NH10_002071 PF00216 Bacterial DNA-binding protein NH10_002074 PF02082 Transcriptional regulator NH10_002075 PF00266 Aminotransferase class-V NH10_002076 PF01592 NifU-like N terminal domain NH10_002077 PF01521 Iron-sulphur cluster biosynthesis NH10_002078 PF07743 HSCB C-terminal oligomerisation domain NH10_002078 PF00226 DnaJ domain NH10_002079 PF00012 Hsp70 protein NH10_002080 PF00111 2Fe-2S iron-sulfur cluster binding domain NH10_002081 PF00211 Adenylate and Guanylate cyclase catalytic domain NH10_002083 PF02559 CarD-like/TRCF domain NH10_002083 PF00270 DEAD/DEAH box helicase NH10_002083 PF00271 Helicase conserved C-terminal domain NH10_002083 PF03461 TRCF domain NH10_002083 PF17757 UvrB interaction domain NH10_002087 PF03737 Aldolase/RraA NH10_002088 PF13460 NAD(P)H-binding NH10_002089 PF01649 Ribosomal protein S20 NH10_002091 PF00459 Inositol monophosphatase family NH10_002094 PF00005 ABC transporter NH10_002094 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NH10_002095 PF00528 Binding-protein-dependent transport system inner membrane component NH10_002096 PF00528 Binding-protein-dependent transport system inner membrane component NH10_002097 PF01432 Peptidase family M3 NH10_002101 PF00593 TonB dependent receptor NH10_002101 PF07715 TonB-dependent Receptor Plug Domain NH10_002102 PF03544 Gram-negative bacterial TonB protein C-terminal NH10_002103 PF01618 MotA/TolQ/ExbB proton channel family NH10_002104 PF02472 Biopolymer transport protein ExbD/TolR NH10_002105 PF02472 Biopolymer transport protein ExbD/TolR NH10_002106 PF01274 Malate synthase NH10_002107 PF03969 AFG1-like ATPase NH10_002109 PF00743 Flavin-binding monooxygenase-like NH10_002111 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NH10_002113 PF00216 Bacterial DNA-binding protein NH10_002114 PF00575 S1 RNA binding domain NH10_002115 PF02224 Cytidylate kinase NH10_002117 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NH10_002119 PF03167 Uracil DNA glycosylase superfamily NH10_002121 PF03934 Type II secretion system (T2SS), protein K NH10_002122 PF11612 Type II secretion system (T2SS), protein J NH10_002122 PF07963 Prokaryotic N-terminal methylation motif NH10_002123 PF07963 Prokaryotic N-terminal methylation motif NH10_002123 PF02501 Type II secretion system (T2SS), protein I NH10_002126 PF01026 TatD related DNase NH10_002128 PF09115 DNA polymerase III, delta subunit, C terminal NH10_002129 PF02348 Cytidylyltransferase NH10_002130 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NH10_002131 PF00664 ABC transporter transmembrane region NH10_002131 PF00005 ABC transporter NH10_002133 PF01618 MotA/TolQ/ExbB proton channel family NH10_002134 PF17762 HTH domain found in ParB protein NH10_002134 PF02195 ParB-like nuclease domain NH10_002135 PF13614 AAA domain NH10_002136 PF02527 rRNA small subunit methyltransferase G NH10_002137 PF00483 Nucleotidyl transferase NH10_002138 PF01636 Phosphotransferase enzyme family NH10_002139 PF04453 LPS transport system D NH10_002139 PF03968 OstA-like protein NH10_002140 PF00639 PPIC-type PPIASE domain NH10_002140 PF09312 SurA N-terminal domain NH10_002141 PF01116 Fructose-bisphosphate aldolase class-II NH10_002143 PF00162 Phosphoglycerate kinase NH10_002145 PF02545 Maf-like protein NH10_002146 PF08007 Cupin superfamily protein NH10_002149 PF00375 Sodium:dicarboxylate symporter family NH10_002150 PF06912 Protein of unknown function (DUF1275) NH10_002151 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) NH10_002152 PF00005 ABC transporter NH10_002152 PF00664 ABC transporter transmembrane region NH10_002154 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NH10_002154 PF12833 Helix-turn-helix domain NH10_002155 PF01597 Glycine cleavage H-protein NH10_002156 PF02146 Sir2 family NH10_002157 PF00474 Sodium:solute symporter family NH10_002158 PF01037 Lrp/AsnC ligand binding domain NH10_002159 PF01619 Proline dehydrogenase NH10_002159 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NH10_002159 PF00171 Aldehyde dehydrogenase family NH10_002159 PF14850 DNA-binding domain of Proline dehydrogenase NH10_002160 PF04229 GrpB protein NH10_002161 PF05958 tRNA (Uracil-5-)-methyltransferase NH10_002163 PF09992 Phosphodiester glycosidase NH10_002165 PF04264 YceI-like domain NH10_002167 PF02779 Transketolase, pyrimidine binding domain NH10_002167 PF02780 Transketolase, C-terminal domain NH10_002167 PF00456 Transketolase, thiamine diphosphate binding domain NH10_002168 PF00438 S-adenosylmethionine synthetase, N-terminal domain NH10_002168 PF02773 S-adenosylmethionine synthetase, C-terminal domain NH10_002168 PF02772 S-adenosylmethionine synthetase, central domain NH10_002172 PF00905 Penicillin binding protein transpeptidase domain NH10_002175 PF02075 Crossover junction endodeoxyribonuclease RuvC NH10_002176 PF01256 Carbohydrate kinase NH10_002176 PF03853 YjeF-related protein N-terminus NH10_002177 PF08331 Domain of unknown function (DUF1730) NH10_002178 PF06968 Biotin and Thiamin Synthesis associated domain NH10_002178 PF04055 Radical SAM superfamily NH10_002181 PF16970 Type-1 fimbrial protein, A NH10_002182 PF02753 Pili assembly chaperone PapD, C-terminal domain NH10_002182 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NH10_002183 PF00577 Outer membrane usher protein NH10_002183 PF13954 PapC N-terminal domain NH10_002183 PF13953 PapC C-terminal domain NH10_002187 PF00892 EamA-like transporter family NH10_002189 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NH10_002191 PF03466 LysR substrate binding domain NH10_002191 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002195 PF00440 Bacterial regulatory proteins, tetR family NH10_002197 PF01709 Transcriptional regulator NH10_002198 PF01037 Lrp/AsnC ligand binding domain NH10_002200 PF00005 ABC transporter NH10_002201 PF00528 Binding-protein-dependent transport system inner membrane component NH10_002202 PF00528 Binding-protein-dependent transport system inner membrane component NH10_002205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_002205 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NH10_002207 PF00296 Luciferase-like monooxygenase NH10_002208 PF03180 NLPA lipoprotein NH10_002209 PF03180 NLPA lipoprotein NH10_002210 PF09383 NIL domain NH10_002210 PF00005 ABC transporter NH10_002211 PF00528 Binding-protein-dependent transport system inner membrane component NH10_002212 PF06071 Protein of unknown function (DUF933) NH10_002212 PF01926 50S ribosome-binding GTPase NH10_002217 PF03591 AzlC protein NH10_002218 PF05437 Branched-chain amino acid transport protein (AzlD) NH10_002220 PF02222 ATP-grasp domain NH10_002221 PF01909 Nucleotidyltransferase domain NH10_002221 PF08335 GlnD PII-uridylyltransferase NH10_002221 PF01966 HD domain NH10_002222 PF00155 Aminotransferase class I and II NH10_002224 PF12852 Cupin NH10_002224 PF12833 Helix-turn-helix domain NH10_002225 PF00255 Glutathione peroxidase NH10_002226 PF01641 SelR domain NH10_002227 PF00155 Aminotransferase class I and II NH10_002228 PF00375 Sodium:dicarboxylate symporter family NH10_002229 PF00710 Asparaginase, N-terminal NH10_002229 PF17763 Glutaminase/Asparaginase C-terminal domain NH10_002230 PF07733 Bacterial DNA polymerase III alpha NTPase domain NH10_002230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NH10_002230 PF02811 PHP domain NH10_002230 PF14579 Helix-hairpin-helix motif NH10_002230 PF01336 OB-fold nucleic acid binding domain NH10_002231 PF00588 SpoU rRNA Methylase family NH10_002232 PF00132 Bacterial transferase hexapeptide (six repeats) NH10_002235 PF13192 Thioredoxin domain NH10_002235 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_002238 PF03466 LysR substrate binding domain NH10_002238 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002239 PF01758 Sodium Bile acid symporter family NH10_002240 PF01022 Bacterial regulatory protein, arsR family NH10_002241 PF03960 ArsC family NH10_002243 PF01979 Amidohydrolase family NH10_002243 PF13382 Adenine deaminase C-terminal domain NH10_002245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002245 PF03466 LysR substrate binding domain NH10_002247 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NH10_002248 PF01177 Asp/Glu/Hydantoin racemase NH10_002249 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NH10_002250 PF00528 Binding-protein-dependent transport system inner membrane component NH10_002251 PF00005 ABC transporter NH10_002252 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NH10_002254 PF00083 Sugar (and other) transporter NH10_002255 PF00296 Luciferase-like monooxygenase NH10_002258 PF01654 Cytochrome bd terminal oxidase subunit I NH10_002259 PF02322 Cytochrome bd terminal oxidase subunit II NH10_002261 PF00155 Aminotransferase class I and II NH10_002261 PF00392 Bacterial regulatory proteins, gntR family NH10_002262 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002262 PF03466 LysR substrate binding domain NH10_002265 PF00698 Acyl transferase domain NH10_002266 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG NH10_002268 PF01039 Carboxyl transferase domain NH10_002269 PF06857 Malonate decarboxylase delta subunit (MdcD) NH10_002270 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NH10_002271 PF16957 Malonate decarboxylase, alpha subunit, transporter NH10_002272 PF07690 Major Facilitator Superfamily NH10_002275 PF00392 Bacterial regulatory proteins, gntR family NH10_002276 PF04172 LrgB-like family NH10_002277 PF03788 LrgA family NH10_002278 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002278 PF03466 LysR substrate binding domain NH10_002279 PF14834 Glutathione S-transferase, C-terminal domain NH10_002279 PF02798 Glutathione S-transferase, N-terminal domain NH10_002280 PF02798 Glutathione S-transferase, N-terminal domain NH10_002281 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002281 PF03466 LysR substrate binding domain NH10_002283 PF00581 Rhodanese-like domain NH10_002284 PF00132 Bacterial transferase hexapeptide (six repeats) NH10_002286 PF00266 Aminotransferase class-V NH10_002287 PF01810 LysE type translocator NH10_002288 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002288 PF03466 LysR substrate binding domain NH10_002289 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH10_002290 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH10_002291 PF00005 ABC transporter NH10_002292 PF00528 Binding-protein-dependent transport system inner membrane component NH10_002293 PF00528 Binding-protein-dependent transport system inner membrane component NH10_002295 PF00072 Response regulator receiver domain NH10_002296 PF00072 Response regulator receiver domain NH10_002296 PF09308 LuxQ, periplasmic NH10_002296 PF00512 His Kinase A (phospho-acceptor) domain NH10_002296 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_002298 PF13404 AsnC-type helix-turn-helix domain NH10_002298 PF01037 Lrp/AsnC ligand binding domain NH10_002300 PF00717 Peptidase S24-like NH10_002305 PF06628 Catalase-related immune-responsive NH10_002305 PF00199 Catalase NH10_002305 PF18011 C-terminal domain found in long catalases NH10_002307 PF02464 Competence-damaged protein NH10_002307 PF18146 Damage-inducible protein CinA KH domain NH10_002307 PF00994 Probable molybdopterin binding domain NH10_002315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002315 PF03466 LysR substrate binding domain NH10_002319 PF00501 AMP-binding enzyme NH10_002319 PF13193 AMP-binding enzyme C-terminal domain NH10_002320 PF00440 Bacterial regulatory proteins, tetR family NH10_002321 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_002321 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_002321 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_002322 PF01039 Carboxyl transferase domain NH10_002323 PF00378 Enoyl-CoA hydratase/isomerase NH10_002324 PF00289 Biotin carboxylase, N-terminal domain NH10_002324 PF02785 Biotin carboxylase C-terminal domain NH10_002324 PF18140 Propionyl-coenzyme A carboxylase BT domain NH10_002324 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NH10_002324 PF00364 Biotin-requiring enzyme NH10_002325 PF00682 HMGL-like NH10_002326 PF03466 LysR substrate binding domain NH10_002326 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002329 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_002329 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_002329 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_002329 PF12806 Acetyl-CoA dehydrogenase C-terminal like NH10_002331 PF07690 Major Facilitator Superfamily NH10_002333 PF01144 Coenzyme A transferase NH10_002334 PF01144 Coenzyme A transferase NH10_002335 PF07690 Major Facilitator Superfamily NH10_002336 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_002336 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_002336 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_002337 PF00378 Enoyl-CoA hydratase/isomerase NH10_002339 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NH10_002339 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NH10_002339 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NH10_002340 PF02803 Thiolase, C-terminal domain NH10_002340 PF00108 Thiolase, N-terminal domain NH10_002341 PF09339 IclR helix-turn-helix domain NH10_002342 PF07690 Major Facilitator Superfamily NH10_002343 PF03060 Nitronate monooxygenase NH10_002344 PF00378 Enoyl-CoA hydratase/isomerase NH10_002345 PF09339 IclR helix-turn-helix domain NH10_002346 PF02515 CoA-transferase family III NH10_002347 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_002347 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_002347 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_002348 PF07690 Major Facilitator Superfamily NH10_002349 PF13419 Haloacid dehalogenase-like hydrolase NH10_002350 PF00266 Aminotransferase class-V NH10_002351 PF01266 FAD dependent oxidoreductase NH10_002352 PF00528 Binding-protein-dependent transport system inner membrane component NH10_002353 PF00005 ABC transporter NH10_002353 PF08402 TOBE domain NH10_002355 PF00392 Bacterial regulatory proteins, gntR family NH10_002355 PF07702 UTRA domain NH10_002356 PF01494 FAD binding domain NH10_002357 PF01614 Bacterial transcriptional regulator NH10_002357 PF09339 IclR helix-turn-helix domain NH10_002358 PF02525 Flavodoxin-like fold NH10_002359 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002359 PF03466 LysR substrate binding domain NH10_002360 PF02627 Carboxymuconolactone decarboxylase family NH10_002361 PF00171 Aldehyde dehydrogenase family NH10_002363 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NH10_002364 PF00171 Aldehyde dehydrogenase family NH10_002365 PF00296 Luciferase-like monooxygenase NH10_002366 PF01613 Flavin reductase like domain NH10_002367 PF12697 Alpha/beta hydrolase family NH10_002371 PF01292 Prokaryotic cytochrome b561 NH10_002372 PF00199 Catalase NH10_002373 PF07690 Major Facilitator Superfamily NH10_002374 PF00682 HMGL-like NH10_002375 PF02515 CoA-transferase family III NH10_002381 PF00313 'Cold-shock' DNA-binding domain NH10_002382 PF03412 Peptidase C39 family NH10_002382 PF00005 ABC transporter NH10_002382 PF00664 ABC transporter transmembrane region NH10_002389 PF08281 Sigma-70, region 4 NH10_002389 PF00665 Integrase core domain NH10_002390 PF01695 IstB-like ATP binding protein NH10_002396 PF00580 UvrD/REP helicase N-terminal domain NH10_002396 PF13361 UvrD-like helicase C-terminal domain NH10_002397 PF02463 RecF/RecN/SMC N terminal domain NH10_002398 PF03061 Thioesterase superfamily NH10_002399 PF00132 Bacterial transferase hexapeptide (six repeats) NH10_002400 PF08223 PaaX-like protein C-terminal domain NH10_002400 PF07848 PaaX-like protein NH10_002401 PF14535 AMP-binding enzyme C-terminal domain NH10_002401 PF00501 AMP-binding enzyme NH10_002402 PF02803 Thiolase, C-terminal domain NH10_002402 PF00108 Thiolase, N-terminal domain NH10_002403 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NH10_002403 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NH10_002403 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NH10_002404 PF00378 Enoyl-CoA hydratase/isomerase NH10_002405 PF00378 Enoyl-CoA hydratase/isomerase NH10_002406 PF00111 2Fe-2S iron-sulfur cluster binding domain NH10_002406 PF00175 Oxidoreductase NAD-binding domain NH10_002406 PF00970 Oxidoreductase FAD-binding domain NH10_002407 PF01883 Iron-sulfur cluster assembly protein NH10_002408 PF05138 Phenylacetic acid catabolic protein NH10_002409 PF06243 Phenylacetic acid degradation B NH10_002410 PF05138 Phenylacetic acid catabolic protein NH10_002411 PF01575 MaoC like domain NH10_002411 PF00171 Aldehyde dehydrogenase family NH10_002412 PF03313 Serine dehydratase alpha chain NH10_002412 PF03315 Serine dehydratase beta chain NH10_002413 PF13520 Amino acid permease NH10_002414 PF00171 Aldehyde dehydrogenase family NH10_002415 PF00083 Sugar (and other) transporter NH10_002417 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_002417 PF04324 BFD-like [2Fe-2S] binding domain NH10_002419 PF01266 FAD dependent oxidoreductase NH10_002420 PF05544 Proline racemase NH10_002421 PF00392 Bacterial regulatory proteins, gntR family NH10_002423 PF00701 Dihydrodipicolinate synthetase family NH10_002426 PF09278 MerR, DNA binding NH10_002426 PF00376 MerR family regulatory protein NH10_002428 PF02677 Epoxyqueuosine reductase QueH NH10_002431 PF07690 Major Facilitator Superfamily NH10_002432 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NH10_002434 PF03466 LysR substrate binding domain NH10_002434 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002438 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NH10_002439 PF06812 ImpA, N-terminal, type VI secretion system NH10_002440 PF10431 C-terminal, D2-small domain, of ClpB protein NH10_002440 PF17871 AAA lid domain NH10_002440 PF07724 AAA domain (Cdc48 subfamily) NH10_002440 PF00004 ATPase family associated with various cellular activities (AAA) NH10_002442 PF01389 OmpA-like transmembrane domain NH10_002442 PF00691 OmpA family NH10_002444 PF14331 ImcF-related N-terminal domain NH10_002444 PF06761 Intracellular multiplication and human macrophage-killing NH10_002444 PF06744 Type VI secretion protein IcmF C-terminal NH10_002447 PF05947 Type VI secretion system, TssF NH10_002450 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NH10_002455 PF00005 ABC transporter NH10_002456 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH10_002457 PF01425 Amidase NH10_002458 PF08753 NikR C terminal nickel binding domain NH10_002458 PF01402 Ribbon-helix-helix protein, copG family NH10_002460 PF01638 HxlR-like helix-turn-helix NH10_002461 PF02525 Flavodoxin-like fold NH10_002462 PF02785 Biotin carboxylase C-terminal domain NH10_002462 PF00289 Biotin carboxylase, N-terminal domain NH10_002462 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NH10_002465 PF08240 Alcohol dehydrogenase GroES-like domain NH10_002465 PF00107 Zinc-binding dehydrogenase NH10_002465 PF13823 Alcohol dehydrogenase GroES-associated NH10_002467 PF00440 Bacterial regulatory proteins, tetR family NH10_002472 PF00654 Voltage gated chloride channel NH10_002473 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NH10_002473 PF00364 Biotin-requiring enzyme NH10_002473 PF00289 Biotin carboxylase, N-terminal domain NH10_002473 PF02785 Biotin carboxylase C-terminal domain NH10_002475 PF07286 Protein of unknown function (DUF1445) NH10_002476 PF03746 LamB/YcsF family NH10_002477 PF01566 Natural resistance-associated macrophage protein NH10_002478 PF03466 LysR substrate binding domain NH10_002478 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002482 PF05593 RHS Repeat NH10_002482 PF03527 RHS protein NH10_002485 PF05593 RHS Repeat NH10_002485 PF03527 RHS protein NH10_002486 PF13296 Putative type VI secretion system Rhs element Vgr NH10_002486 PF04717 Type VI secretion system, phage-baseplate injector NH10_002486 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NH10_002490 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NH10_002490 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NH10_002494 PF07690 Major Facilitator Superfamily NH10_002496 PF03279 Bacterial lipid A biosynthesis acyltransferase NH10_002497 PF03707 Bacterial signalling protein N terminal repeat NH10_002497 PF00990 Diguanylate cyclase, GGDEF domain NH10_002497 PF00563 EAL domain NH10_002499 PF00892 EamA-like transporter family NH10_002500 PF01037 Lrp/AsnC ligand binding domain NH10_002501 PF05192 MutS domain III NH10_002501 PF01624 MutS domain I NH10_002501 PF05188 MutS domain II NH10_002501 PF00488 MutS domain V NH10_002501 PF05190 MutS family domain IV NH10_002503 PF00037 4Fe-4S binding domain NH10_002503 PF11953 Domain of unknown function (DUF3470) NH10_002505 PF01596 O-methyltransferase NH10_002507 PF00132 Bacterial transferase hexapeptide (six repeats) NH10_002508 PF01205 Uncharacterized protein family UPF0029 NH10_002510 PF00664 ABC transporter transmembrane region NH10_002510 PF03412 Peptidase C39 family NH10_002510 PF00005 ABC transporter NH10_002511 PF02321 Outer membrane efflux protein NH10_002512 PF12399 Branched-chain amino acid ATP-binding cassette transporter NH10_002512 PF00005 ABC transporter NH10_002513 PF03968 OstA-like protein NH10_002516 PF01380 SIS domain NH10_002516 PF00571 CBS domain NH10_002517 PF01406 tRNA synthetases class I (C) catalytic domain NH10_002517 PF09190 DALR domain NH10_002519 PF00589 Phage integrase family NH10_002527 PF13229 Right handed beta helix region NH10_002527 PF12708 Pectate lyase superfamily protein NH10_002531 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) NH10_002535 PF06381 Protein of unknown function (DUF1073) NH10_002548 PF01638 HxlR-like helix-turn-helix NH10_002549 PF07690 Major Facilitator Superfamily NH10_002554 PF14748 Pyrroline-5-carboxylate reductase dimerisation NH10_002554 PF03807 NADP oxidoreductase coenzyme F420-dependent NH10_002556 PF00313 'Cold-shock' DNA-binding domain NH10_002557 PF01810 LysE type translocator NH10_002563 PF13742 OB-fold nucleic acid binding domain NH10_002563 PF02601 Exonuclease VII, large subunit NH10_002570 PF00376 MerR family regulatory protein NH10_002570 PF09278 MerR, DNA binding NH10_002571 PF00403 Heavy-metal-associated domain NH10_002572 PF00403 Heavy-metal-associated domain NH10_002573 PF03466 LysR substrate binding domain NH10_002573 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002574 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NH10_002574 PF00355 Rieske [2Fe-2S] domain NH10_002575 PF00866 Ring hydroxylating beta subunit NH10_002576 PF00111 2Fe-2S iron-sulfur cluster binding domain NH10_002576 PF00970 Oxidoreductase FAD-binding domain NH10_002576 PF00175 Oxidoreductase NAD-binding domain NH10_002577 PF00106 short chain dehydrogenase NH10_002578 PF03594 Benzoate membrane transport protein NH10_002579 PF07690 Major Facilitator Superfamily NH10_002581 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NH10_002581 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NH10_002582 PF00270 DEAD/DEAH box helicase NH10_002582 PF11898 Domain of unknown function (DUF3418) NH10_002582 PF04408 Helicase associated domain (HA2) NH10_002582 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NH10_002582 PF00271 Helicase conserved C-terminal domain NH10_002583 PF10417 C-terminal domain of 1-Cys peroxiredoxin NH10_002583 PF00578 AhpC/TSA family NH10_002587 PF13192 Thioredoxin domain NH10_002587 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_002589 PF00043 Glutathione S-transferase, C-terminal domain NH10_002589 PF02798 Glutathione S-transferase, N-terminal domain NH10_002591 PF02390 Putative methyltransferase NH10_002592 PF00043 Glutathione S-transferase, C-terminal domain NH10_002592 PF13417 Glutathione S-transferase, N-terminal domain NH10_002594 PF00691 OmpA family NH10_002594 PF13488 Glycine zipper NH10_002595 PF01979 Amidohydrolase family NH10_002596 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NH10_002596 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NH10_002598 PF10672 S-adenosylmethionine-dependent methyltransferase NH10_002598 PF01170 Putative RNA methylase family UPF0020 NH10_002598 PF02926 THUMP domain NH10_002601 PF00004 ATPase family associated with various cellular activities (AAA) NH10_002601 PF07724 AAA domain (Cdc48 subfamily) NH10_002601 PF17871 AAA lid domain NH10_002601 PF02861 Clp amino terminal domain, pathogenicity island component NH10_002601 PF10431 C-terminal, D2-small domain, of ClpB protein NH10_002604 PF02566 OsmC-like protein NH10_002605 PF13545 Crp-like helix-turn-helix domain NH10_002605 PF00027 Cyclic nucleotide-binding domain NH10_002606 PF00248 Aldo/keto reductase family NH10_002609 PF00709 Adenylosuccinate synthetase NH10_002610 PF13393 Histidyl-tRNA synthetase NH10_002611 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NH10_002611 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NH10_002612 PF02272 DHHA1 domain NH10_002612 PF01411 tRNA synthetases class II (A) NH10_002612 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NH10_002613 PF00696 Amino acid kinase family NH10_002613 PF01842 ACT domain NH10_002613 PF13840 ACT domain NH10_002614 PF02599 Global regulator protein family NH10_002615 PF01351 Ribonuclease HII NH10_002617 PF01292 Prokaryotic cytochrome b561 NH10_002618 PF00962 Adenosine/AMP deaminase NH10_002619 PF00860 Permease family NH10_002621 PF00743 Flavin-binding monooxygenase-like NH10_002622 PF00106 short chain dehydrogenase NH10_002624 PF17954 Quercetinase C-terminal cupin domain NH10_002624 PF02678 Pirin NH10_002625 PF17932 Tetracyclin repressor-like, C-terminal domain NH10_002625 PF00440 Bacterial regulatory proteins, tetR family NH10_002627 PF00106 short chain dehydrogenase NH10_002628 PF00743 Flavin-binding monooxygenase-like NH10_002629 PF04072 Leucine carboxyl methyltransferase NH10_002630 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NH10_002630 PF12833 Helix-turn-helix domain NH10_002631 PF00743 Flavin-binding monooxygenase-like NH10_002632 PF00106 short chain dehydrogenase NH10_002633 PF07859 alpha/beta hydrolase fold NH10_002634 PF05199 GMC oxidoreductase NH10_002635 PF03573 outer membrane porin, OprD family NH10_002636 PF07690 Major Facilitator Superfamily NH10_002637 PF00355 Rieske [2Fe-2S] domain NH10_002638 PF00111 2Fe-2S iron-sulfur cluster binding domain NH10_002638 PF00175 Oxidoreductase NAD-binding domain NH10_002641 PF07690 Major Facilitator Superfamily NH10_002642 PF00378 Enoyl-CoA hydratase/isomerase NH10_002643 PF00171 Aldehyde dehydrogenase family NH10_002645 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_002645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_002645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_002646 PF03573 outer membrane porin, OprD family NH10_002649 PF07519 Tannase and feruloyl esterase NH10_002650 PF00392 Bacterial regulatory proteins, gntR family NH10_002650 PF07729 FCD domain NH10_002651 PF00171 Aldehyde dehydrogenase family NH10_002652 PF00701 Dihydrodipicolinate synthetase family NH10_002653 PF13378 Enolase C-terminal domain-like NH10_002654 PF07690 Major Facilitator Superfamily NH10_002655 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NH10_002655 PF08666 SAF domain NH10_002656 PF00892 EamA-like transporter family NH10_002657 PF12833 Helix-turn-helix domain NH10_002657 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NH10_002658 PF00171 Aldehyde dehydrogenase family NH10_002662 PF00324 Amino acid permease NH10_002663 PF04958 Arginine N-succinyltransferase beta subunit NH10_002664 PF00202 Aminotransferase class-III NH10_002666 PF00171 Aldehyde dehydrogenase family NH10_002668 PF07729 FCD domain NH10_002668 PF00392 Bacterial regulatory proteins, gntR family NH10_002670 PF00324 Amino acid permease NH10_002671 PF01266 FAD dependent oxidoreductase NH10_002672 PF00324 Amino acid permease NH10_002680 PF05593 RHS Repeat NH10_002680 PF03527 RHS protein NH10_002681 PF13296 Putative type VI secretion system Rhs element Vgr NH10_002681 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NH10_002681 PF04717 Type VI secretion system, phage-baseplate injector NH10_002684 PF03180 NLPA lipoprotein NH10_002685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NH10_002685 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_002686 PF00764 Arginosuccinate synthase NH10_002687 PF00563 EAL domain NH10_002687 PF01590 GAF domain NH10_002687 PF00990 Diguanylate cyclase, GGDEF domain NH10_002687 PF00360 Phytochrome region NH10_002688 PF01979 Amidohydrolase family NH10_002689 PF00929 Exonuclease NH10_002690 PF00593 TonB dependent receptor NH10_002690 PF07715 TonB-dependent Receptor Plug Domain NH10_002697 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_002697 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NH10_002698 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NH10_002698 PF00005 ABC transporter NH10_002699 PF00528 Binding-protein-dependent transport system inner membrane component NH10_002699 PF12911 N-terminal TM domain of oligopeptide transport permease C NH10_002700 PF00528 Binding-protein-dependent transport system inner membrane component NH10_002701 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NH10_002702 PF01476 LysM domain NH10_002702 PF01464 Transglycosylase SLT domain NH10_002702 PF01476 LysM domain NH10_002702 PF01464 Transglycosylase SLT domain NH10_002703 PF00929 Exonuclease NH10_002705 PF00293 NUDIX domain NH10_002705 PF09297 NADH pyrophosphatase zinc ribbon domain NH10_002707 PF04972 BON domain NH10_002708 PF02021 Uncharacterised protein family UPF0102 NH10_002709 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NH10_002711 PF03466 LysR substrate binding domain NH10_002711 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002712 PF01810 LysE type translocator NH10_002714 PF13411 MerR HTH family regulatory protein NH10_002716 PF01494 FAD binding domain NH10_002717 PF01494 FAD binding domain NH10_002718 PF05195 Aminopeptidase P, N-terminal domain NH10_002718 PF00557 Metallopeptidase family M24 NH10_002725 PF01812 5-formyltetrahydrofolate cyclo-ligase family NH10_002726 PF00004 ATPase family associated with various cellular activities (AAA) NH10_002726 PF05362 Lon protease (S16) C-terminal proteolytic domain NH10_002726 PF02190 ATP-dependent protease La (LON) substrate-binding domain NH10_002727 PF02590 Predicted SPOUT methyltransferase NH10_002728 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NH10_002730 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NH10_002730 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NH10_002731 PF04060 Putative Fe-S cluster NH10_002732 PF10576 Iron-sulfur binding domain of endonuclease III NH10_002732 PF00633 Helix-hairpin-helix motif NH10_002732 PF00730 HhH-GPD superfamily base excision DNA repair protein NH10_002733 PF05191 Adenylate kinase, active site lid NH10_002736 PF00905 Penicillin binding protein transpeptidase domain NH10_002736 PF03717 Penicillin-binding Protein dimerisation domain NH10_002739 PF02492 CobW/HypB/UreG, nucleotide-binding domain NH10_002740 PF01730 UreF NH10_002741 PF02814 UreE urease accessory protein, N-terminal domain NH10_002741 PF05194 UreE urease accessory protein, C-terminal domain NH10_002742 PF01979 Amidohydrolase family NH10_002742 PF00449 Urease alpha-subunit, N-terminal domain NH10_002743 PF00699 Urease beta subunit NH10_002744 PF00547 Urease, gamma subunit NH10_002745 PF01774 UreD urease accessory protein NH10_002748 PF00463 Isocitrate lyase family NH10_002749 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002749 PF03466 LysR substrate binding domain NH10_002750 PF00571 CBS domain NH10_002750 PF03471 Transporter associated domain NH10_002750 PF01595 Cyclin M transmembrane N-terminal domain NH10_002751 PF03600 Citrate transporter NH10_002754 PF00009 Elongation factor Tu GTP binding domain NH10_002755 PF01507 Phosphoadenosine phosphosulfate reductase family NH10_002757 PF14052 Capsule assembly protein Wzi NH10_002758 PF00152 tRNA synthetases class II (D, K and N) NH10_002758 PF01336 OB-fold nucleic acid binding domain NH10_002761 PF00301 Rubredoxin NH10_002762 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_002762 PF18113 Rubredoxin binding C-terminal domain NH10_002763 PF00561 alpha/beta hydrolase fold NH10_002764 PF03466 LysR substrate binding domain NH10_002764 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002766 PF02503 Polyphosphate kinase middle domain NH10_002766 PF13090 Polyphosphate kinase C-terminal domain 2 NH10_002766 PF13089 Polyphosphate kinase N-terminal domain NH10_002766 PF17941 Polyphosphate kinase C-terminal domain 1 NH10_002767 PF00912 Transglycosylase NH10_002768 PF01694 Rhomboid family NH10_002770 PF00005 ABC transporter NH10_002771 PF13472 GDSL-like Lipase/Acylhydrolase family NH10_002772 PF00484 Carbonic anhydrase NH10_002775 PF00561 alpha/beta hydrolase fold NH10_002777 PF07715 TonB-dependent Receptor Plug Domain NH10_002777 PF00593 TonB dependent receptor NH10_002778 PF01106 NifU-like domain NH10_002778 PF01521 Iron-sulphur cluster biosynthesis NH10_002780 PF00884 Sulfatase NH10_002781 PF03781 Sulfatase-modifying factor enzyme 1 NH10_002784 PF00291 Pyridoxal-phosphate dependent enzyme NH10_002785 PF01384 Phosphate transporter family NH10_002786 PF02574 Homocysteine S-methyltransferase NH10_002786 PF02310 B12 binding domain NH10_002786 PF02607 B12 binding domain NH10_002786 PF02965 Vitamin B12 dependent methionine synthase, activation domain NH10_002786 PF00809 Pterin binding enzyme NH10_002787 PF02779 Transketolase, pyrimidine binding domain NH10_002787 PF02780 Transketolase, C-terminal domain NH10_002788 PF00456 Transketolase, thiamine diphosphate binding domain NH10_002789 PF07690 Major Facilitator Superfamily NH10_002791 PF03466 LysR substrate binding domain NH10_002791 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002793 PF01263 Aldose 1-epimerase NH10_002794 PF07690 Major Facilitator Superfamily NH10_002795 PF12833 Helix-turn-helix domain NH10_002795 PF02311 AraC-like ligand binding domain NH10_002796 PF04960 Glutaminase NH10_002797 PF01327 Polypeptide deformylase NH10_002799 PF07690 Major Facilitator Superfamily NH10_002801 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NH10_002801 PF00205 Thiamine pyrophosphate enzyme, central domain NH10_002801 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NH10_002802 PF00171 Aldehyde dehydrogenase family NH10_002803 PF01958 Domain of unknown function DUF108 NH10_002803 PF03447 Homoserine dehydrogenase, NAD binding domain NH10_002805 PF12697 Alpha/beta hydrolase family NH10_002807 PF07690 Major Facilitator Superfamily NH10_002808 PF14759 Reductase C-terminal NH10_002808 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_002809 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NH10_002811 PF00355 Rieske [2Fe-2S] domain NH10_002813 PF00355 Rieske [2Fe-2S] domain NH10_002814 PF01614 Bacterial transcriptional regulator NH10_002814 PF09339 IclR helix-turn-helix domain NH10_002817 PF00378 Enoyl-CoA hydratase/isomerase NH10_002819 PF00535 Glycosyl transferase family 2 NH10_002820 PF01522 Polysaccharide deacetylase NH10_002820 PF14883 Hypothetical glycosyl hydrolase family 13 NH10_002821 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH10_002822 PF07152 YaeQ protein NH10_002823 PF00375 Sodium:dicarboxylate symporter family NH10_002824 PF02492 CobW/HypB/UreG, nucleotide-binding domain NH10_002824 PF07683 Cobalamin synthesis protein cobW C-terminal domain NH10_002826 PF03061 Thioesterase superfamily NH10_002828 PF02028 BCCT, betaine/carnitine/choline family transporter NH10_002829 PF02028 BCCT, betaine/carnitine/choline family transporter NH10_002830 PF13977 BetI-type transcriptional repressor, C-terminal NH10_002830 PF00440 Bacterial regulatory proteins, tetR family NH10_002831 PF00171 Aldehyde dehydrogenase family NH10_002832 PF00732 GMC oxidoreductase NH10_002832 PF05199 GMC oxidoreductase NH10_002833 PF06039 Malate:quinone oxidoreductase (Mqo) NH10_002835 PF02574 Homocysteine S-methyltransferase NH10_002836 PF13520 Amino acid permease NH10_002841 PF01126 Heme oxygenase NH10_002843 PF04575 Protein of unknown function (DUF560) NH10_002845 PF07715 TonB-dependent Receptor Plug Domain NH10_002845 PF00593 TonB dependent receptor NH10_002847 PF04542 Sigma-70 region 2 NH10_002847 PF08281 Sigma-70, region 4 NH10_002849 PF00701 Dihydrodipicolinate synthetase family NH10_002850 PF00083 Sugar (and other) transporter NH10_002855 PF01026 TatD related DNase NH10_002858 PF07693 KAP family P-loop domain NH10_002873 PF00589 Phage integrase family NH10_002873 PF13356 Arm DNA-binding domain NH10_002875 PF07690 Major Facilitator Superfamily NH10_002876 PF13533 Biotin-lipoyl like NH10_002877 PF03061 Thioesterase superfamily NH10_002878 PF00490 Delta-aminolevulinic acid dehydratase NH10_002879 PF01266 FAD dependent oxidoreductase NH10_002880 PF08338 Domain of unknown function (DUF1731) NH10_002880 PF01370 NAD dependent epimerase/dehydratase family NH10_002884 PF00149 Calcineurin-like phosphoesterase NH10_002884 PF12320 Type 5 capsule protein repressor C-terminal domain NH10_002886 PF01168 Alanine racemase, N-terminal domain NH10_002887 PF00437 Type II/IV secretion system protein NH10_002888 PF00437 Type II/IV secretion system protein NH10_002889 PF01475 Ferric uptake regulator family NH10_002890 PF04355 SmpA / OmlA family NH10_002891 PF03658 RnfH family Ubiquitin NH10_002893 PF01814 Hemerythrin HHE cation binding domain NH10_002894 PF13230 Glutamine amidotransferases class-II NH10_002896 PF00696 Amino acid kinase family NH10_002897 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NH10_002897 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NH10_002897 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NH10_002897 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NH10_002898 PF00692 dUTPase NH10_002899 PF00580 UvrD/REP helicase N-terminal domain NH10_002899 PF13361 UvrD-like helicase C-terminal domain NH10_002900 PF00691 OmpA family NH10_002900 PF13488 Glycine zipper NH10_002901 PF01553 Acyltransferase NH10_002903 PF03775 Septum formation inhibitor MinC, C-terminal domain NH10_002904 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NH10_002905 PF03776 Septum formation topological specificity factor MinE NH10_002907 PF01810 LysE type translocator NH10_002908 PF17854 FtsK alpha domain NH10_002908 PF09397 Ftsk gamma domain NH10_002908 PF01580 FtsK/SpoIIIE family NH10_002908 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NH10_002909 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_002910 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NH10_002911 PF04377 Arginine-tRNA-protein transferase, C terminus NH10_002911 PF04376 Arginine-tRNA-protein transferase, N terminus NH10_002912 PF00583 Acetyltransferase (GNAT) family NH10_002915 PF00009 Elongation factor Tu GTP binding domain NH10_002915 PF03144 Elongation factor Tu domain 2 NH10_002915 PF03143 Elongation factor Tu C-terminal domain NH10_002916 PF03764 Elongation factor G, domain IV NH10_002916 PF03144 Elongation factor Tu domain 2 NH10_002916 PF00009 Elongation factor Tu GTP binding domain NH10_002916 PF00679 Elongation factor G C-terminus NH10_002916 PF14492 Elongation Factor G, domain II NH10_002917 PF00177 Ribosomal protein S7p/S5e NH10_002918 PF00164 Ribosomal protein S12/S23 NH10_002920 PF00109 Beta-ketoacyl synthase, N-terminal domain NH10_002920 PF02801 Beta-ketoacyl synthase, C-terminal domain NH10_002921 PF03653 Uncharacterised protein family (UPF0093) NH10_002922 PF05726 Pirin C-terminal cupin domain NH10_002922 PF02678 Pirin NH10_002924 PF00795 Carbon-nitrogen hydrolase NH10_002924 PF02540 NAD synthase NH10_002926 PF00970 Oxidoreductase FAD-binding domain NH10_002926 PF00111 2Fe-2S iron-sulfur cluster binding domain NH10_002926 PF00175 Oxidoreductase NAD-binding domain NH10_002927 PF00171 Aldehyde dehydrogenase family NH10_002928 PF00355 Rieske [2Fe-2S] domain NH10_002928 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NH10_002929 PF07859 alpha/beta hydrolase fold NH10_002930 PF02028 BCCT, betaine/carnitine/choline family transporter NH10_002931 PF00180 Isocitrate/isopropylmalate dehydrogenase NH10_002932 PF03466 LysR substrate binding domain NH10_002932 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_002934 PF00037 4Fe-4S binding domain NH10_002935 PF01467 Cytidylyltransferase-like NH10_002936 PF01668 SmpB protein NH10_002937 PF03358 NADPH-dependent FMN reductase NH10_002938 PF02578 Multi-copper polyphenol oxidoreductase laccase NH10_002939 PF01479 S4 domain NH10_002939 PF00849 RNA pseudouridylate synthase NH10_002940 PF13525 Outer membrane lipoprotein NH10_002941 PF10410 DnaB-helicase binding domain of primase NH10_002941 PF08278 DNA primase DnaG DnaB-binding NH10_002941 PF08275 DNA primase catalytic core, N-terminal domain NH10_002941 PF01807 CHC2 zinc finger NH10_002942 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NH10_002942 PF01488 Shikimate / quinate 5-dehydrogenase NH10_002942 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NH10_002944 PF03550 Outer membrane lipoprotein LolB NH10_002945 PF14572 Phosphoribosyl synthetase-associated domain NH10_002945 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NH10_002946 PF01386 Ribosomal L25p family NH10_002947 PF01195 Peptidyl-tRNA hydrolase NH10_002948 PF02261 Aspartate decarboxylase NH10_002951 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NH10_002953 PF08543 Phosphomethylpyrimidine kinase NH10_002953 PF03070 TENA/THI-4/PQQC family NH10_002953 PF02581 Thiamine monophosphate synthase NH10_002954 PF04972 BON domain NH10_002954 PF01476 LysM domain NH10_002955 PF00550 Phosphopantetheine attachment site NH10_002957 PF00698 Acyl transferase domain NH10_002958 PF01783 Ribosomal L32p protein family NH10_002959 PF02620 Large ribosomal RNA subunit accumulation protein YceD NH10_002960 PF04315 Elongation factor P hydroxylase NH10_002961 PF01300 Telomere recombination NH10_002962 PF02616 Segregation and condensation protein ScpA NH10_002963 PF04079 Segregation and condensation complex subunit ScpB NH10_002964 PF00849 RNA pseudouridylate synthase NH10_002964 PF01479 S4 domain NH10_002967 PF00155 Aminotransferase class I and II NH10_002968 PF00202 Aminotransferase class-III NH10_002968 PF04055 Radical SAM superfamily NH10_002968 PF06968 Biotin and Thiamin Synthesis associated domain NH10_002969 PF08241 Methyltransferase domain NH10_002969 PF12697 Alpha/beta hydrolase family NH10_002970 PF02358 Trehalose-phosphatase NH10_002971 PF00982 Glycosyltransferase family 20 NH10_002972 PF07690 Major Facilitator Superfamily NH10_002973 PF00210 Ferritin-like domain NH10_002974 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NH10_002974 PF03120 NAD-dependent DNA ligase OB-fold domain NH10_002974 PF01653 NAD-dependent DNA ligase adenylation domain NH10_002974 PF00533 BRCA1 C Terminus (BRCT) domain NH10_002974 PF12826 Helix-hairpin-helix motif NH10_002976 PF02463 RecF/RecN/SMC N terminal domain NH10_002976 PF06470 SMC proteins Flexible Hinge Domain NH10_002978 PF01925 Sulfite exporter TauE/SafE NH10_002980 PF03309 Type III pantothenate kinase NH10_002981 PF00448 SRP54-type protein, GTPase domain NH10_002981 PF02881 SRP54-type protein, helical bundle domain NH10_002981 PF02978 Signal peptide binding domain NH10_002983 PF01207 Dihydrouridine synthase (Dus) NH10_002989 PF00692 dUTPase NH10_002992 PF01048 Phosphorylase superfamily NH10_002993 PF10609 NUBPL iron-transfer P-loop NTPase NH10_002995 PF09334 tRNA synthetases class I (M) NH10_002995 PF01588 Putative tRNA binding domain NH10_003000 PF13533 Biotin-lipoyl like NH10_003001 PF00291 Pyridoxal-phosphate dependent enzyme NH10_003004 PF05552 Conserved TM helix NH10_003007 PF00175 Oxidoreductase NAD-binding domain NH10_003007 PF00970 Oxidoreductase FAD-binding domain NH10_003008 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_003008 PF03466 LysR substrate binding domain NH10_003010 PF00313 'Cold-shock' DNA-binding domain NH10_003012 PF00361 Proton-conducting membrane transporter NH10_003013 PF00361 Proton-conducting membrane transporter NH10_003014 PF00361 Proton-conducting membrane transporter NH10_003014 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NH10_003015 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NH10_003016 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NH10_003017 PF12838 4Fe-4S dicluster domain NH10_003018 PF00146 NADH dehydrogenase NH10_003019 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NH10_003019 PF00384 Molybdopterin oxidoreductase NH10_003019 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NH10_003020 PF10531 SLBB domain NH10_003020 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NH10_003020 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NH10_003022 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NH10_003022 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NH10_003023 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NH10_003024 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NH10_003025 PF17151 Periplasmic sensor domain NH10_003025 PF00990 Diguanylate cyclase, GGDEF domain NH10_003027 PF00672 HAMP domain NH10_003027 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_003027 PF00512 His Kinase A (phospho-acceptor) domain NH10_003028 PF00486 Transcriptional regulatory protein, C terminal NH10_003028 PF00072 Response regulator receiver domain NH10_003029 PF00317 Ribonucleotide reductase, all-alpha domain NH10_003029 PF02867 Ribonucleotide reductase, barrel domain NH10_003029 PF03477 ATP cone domain NH10_003031 PF00268 Ribonucleotide reductase, small chain NH10_003033 PF02567 Phenazine biosynthesis-like protein NH10_003039 PF16295 Tetracyclin repressor-like, C-terminal domain NH10_003039 PF00440 Bacterial regulatory proteins, tetR family NH10_003040 PF01613 Flavin reductase like domain NH10_003041 PF08267 Cobalamin-independent synthase, N-terminal domain NH10_003041 PF01717 Cobalamin-independent synthase, Catalytic domain NH10_003043 PF03466 LysR substrate binding domain NH10_003043 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_003044 PF01810 LysE type translocator NH10_003046 PF12833 Helix-turn-helix domain NH10_003046 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NH10_003047 PF01546 Peptidase family M20/M25/M40 NH10_003047 PF07687 Peptidase dimerisation domain NH10_003049 PF03466 LysR substrate binding domain NH10_003049 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_003050 PF07690 Major Facilitator Superfamily NH10_003052 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_003052 PF03466 LysR substrate binding domain NH10_003053 PF14537 Cytochrome c3 NH10_003053 PF00890 FAD binding domain NH10_003055 PF02515 CoA-transferase family III NH10_003056 PF07690 Major Facilitator Superfamily NH10_003057 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_003057 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_003057 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_003058 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_003058 PF03466 LysR substrate binding domain NH10_003059 PF08240 Alcohol dehydrogenase GroES-like domain NH10_003059 PF00107 Zinc-binding dehydrogenase NH10_003060 PF00962 Adenosine/AMP deaminase NH10_003061 PF02445 Quinolinate synthetase A protein NH10_003062 PF01960 ArgJ family NH10_003063 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NH10_003063 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NH10_003064 PF00893 Small Multidrug Resistance protein NH10_003066 PF05275 Copper resistance protein B precursor (CopB) NH10_003067 PF07731 Multicopper oxidase NH10_003067 PF07732 Multicopper oxidase NH10_003067 PF00394 Multicopper oxidase NH10_003070 PF00834 Ribulose-phosphate 3 epimerase family NH10_003072 PF00756 Putative esterase NH10_003074 PF04445 Putative SAM-dependent methyltransferase NH10_003075 PF00814 Glycoprotease family NH10_003076 PF00132 Bacterial transferase hexapeptide (six repeats) NH10_003077 PF00293 NUDIX domain NH10_003085 PF00425 chorismate binding enzyme NH10_003085 PF04715 Anthranilate synthase component I, N terminal region NH10_003086 PF00155 Aminotransferase class I and II NH10_003087 PF00815 Histidinol dehydrogenase NH10_003088 PF01634 ATP phosphoribosyltransferase NH10_003089 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NH10_003090 PF01722 BolA-like protein NH10_003091 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NH10_003092 PF00309 Sigma-54 factor, Activator interacting domain (AID) NH10_003092 PF04963 Sigma-54 factor, core binding domain NH10_003092 PF04552 Sigma-54, DNA binding domain NH10_003096 PF00795 Carbon-nitrogen hydrolase NH10_003098 PF01047 MarR family NH10_003099 PF02566 OsmC-like protein NH10_003100 PF00437 Type II/IV secretion system protein NH10_003104 PF00476 DNA polymerase family A NH10_003104 PF01612 3'-5' exonuclease NH10_003104 PF01367 5'-3' exonuclease, C-terminal SAM fold NH10_003104 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NH10_003105 PF02325 YGGT family NH10_003106 PF14748 Pyrroline-5-carboxylate reductase dimerisation NH10_003106 PF03807 NADP oxidoreductase coenzyme F420-dependent NH10_003107 PF01171 PP-loop family NH10_003107 PF09179 TilS substrate binding domain NH10_003107 PF11734 TilS substrate C-terminal domain NH10_003108 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NH10_003109 PF02541 Ppx/GppA phosphatase family NH10_003110 PF00085 Thioredoxin NH10_003111 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NH10_003111 PF07497 Rho termination factor, RNA-binding domain NH10_003111 PF07498 Rho termination factor, N-terminal domain NH10_003113 PF00216 Bacterial DNA-binding protein NH10_003114 PF03483 B3/4 domain NH10_003114 PF03484 tRNA synthetase B5 domain NH10_003114 PF03147 Ferredoxin-fold anticodon binding domain NH10_003114 PF01588 Putative tRNA binding domain NH10_003114 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NH10_003115 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NH10_003115 PF01409 tRNA synthetases class II core domain (F) NH10_003118 PF00453 Ribosomal protein L20 NH10_003119 PF01632 Ribosomal protein L35 NH10_003120 PF07690 Major Facilitator Superfamily NH10_003121 PF09335 SNARE associated Golgi protein NH10_003122 PF00043 Glutathione S-transferase, C-terminal domain NH10_003122 PF02798 Glutathione S-transferase, N-terminal domain NH10_003123 PF05198 Translation initiation factor IF-3, N-terminal domain NH10_003123 PF00707 Translation initiation factor IF-3, C-terminal domain NH10_003124 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NH10_003124 PF03129 Anticodon binding domain NH10_003124 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NH10_003124 PF02824 TGS domain NH10_003125 PF13193 AMP-binding enzyme C-terminal domain NH10_003125 PF00501 AMP-binding enzyme NH10_003126 PF04751 Protein of unknown function (DUF615) NH10_003127 PF00381 PTS HPr component phosphorylation site NH10_003128 PF03668 P-loop ATPase protein family NH10_003129 PF02569 Pantoate-beta-alanine ligase NH10_003130 PF02548 Ketopantoate hydroxymethyltransferase NH10_003131 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NH10_003132 PF01743 Poly A polymerase head domain NH10_003132 PF12626 Polymerase A arginine-rich C-terminus NH10_003132 PF12627 Probable RNA and SrmB- binding site of polymerase A NH10_003134 PF03819 MazG nucleotide pyrophosphohydrolase domain NH10_003136 PF13291 ACT domain NH10_003136 PF04607 Region found in RelA / SpoT proteins NH10_003136 PF02824 TGS domain NH10_003137 PF05958 tRNA (Uracil-5-)-methyltransferase NH10_003139 PF00291 Pyridoxal-phosphate dependent enzyme NH10_003140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_003140 PF00512 His Kinase A (phospho-acceptor) domain NH10_003140 PF01627 Hpt domain NH10_003140 PF00072 Response regulator receiver domain NH10_003140 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NH10_003140 PF00672 HAMP domain NH10_003141 PF00378 Enoyl-CoA hydratase/isomerase NH10_003142 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NH10_003142 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NH10_003143 PF01261 Xylose isomerase-like TIM barrel NH10_003145 PF00106 short chain dehydrogenase NH10_003146 PF02233 NAD(P) transhydrogenase beta subunit NH10_003147 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NH10_003148 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NH10_003148 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NH10_003149 PF00892 EamA-like transporter family NH10_003151 PF07690 Major Facilitator Superfamily NH10_003155 PF00394 Multicopper oxidase NH10_003155 PF07731 Multicopper oxidase NH10_003155 PF07732 Multicopper oxidase NH10_003157 PF00486 Transcriptional regulatory protein, C terminal NH10_003157 PF00072 Response regulator receiver domain NH10_003158 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_003158 PF00512 His Kinase A (phospho-acceptor) domain NH10_003158 PF00672 HAMP domain NH10_003159 PF04945 YHS domain NH10_003174 PF00589 Phage integrase family NH10_003175 PF01207 Dihydrouridine synthase (Dus) NH10_003177 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_003177 PF03466 LysR substrate binding domain NH10_003178 PF00899 ThiF family NH10_003179 PF00694 Aconitase C-terminal domain NH10_003179 PF00330 Aconitase family (aconitate hydratase) NH10_003180 PF01026 TatD related DNase NH10_003183 PF16658 Class II release factor RF3, C-terminal domain NH10_003183 PF03144 Elongation factor Tu domain 2 NH10_003183 PF00009 Elongation factor Tu GTP binding domain NH10_003187 PF00563 EAL domain NH10_003187 PF00990 Diguanylate cyclase, GGDEF domain NH10_003187 PF03707 Bacterial signalling protein N terminal repeat NH10_003188 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NH10_003188 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NH10_003189 PF10369 Small subunit of acetolactate synthase NH10_003190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NH10_003190 PF00205 Thiamine pyrophosphate enzyme, central domain NH10_003190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NH10_003192 PF09334 tRNA synthetases class I (M) NH10_003192 PF13603 Leucyl-tRNA synthetase, Domain 2 NH10_003192 PF08264 Anticodon-binding domain of tRNA NH10_003192 PF00133 tRNA synthetases class I (I, L, M and V) NH10_003195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH10_003196 PF12704 MacB-like periplasmic core domain NH10_003196 PF02687 FtsX-like permease family NH10_003196 PF00005 ABC transporter NH10_003197 PF02321 Outer membrane efflux protein NH10_003200 PF00929 Exonuclease NH10_003201 PF03193 RsgA GTPase NH10_003203 PF00462 Glutaredoxin NH10_003204 PF02556 Preprotein translocase subunit SecB NH10_003206 PF01926 50S ribosome-binding GTPase NH10_003206 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NH10_003207 PF13360 PQQ-like domain NH10_003209 PF13393 Histidyl-tRNA synthetase NH10_003209 PF03129 Anticodon binding domain NH10_003210 PF04551 GcpE protein NH10_003211 PF13464 Domain of unknown function (DUF4115) NH10_003213 PF04055 Radical SAM superfamily NH10_003214 PF00334 Nucleoside diphosphate kinase NH10_003215 PF04384 Iron-sulphur cluster assembly NH10_003216 PF01569 PAP2 superfamily NH10_003217 PF00534 Glycosyl transferases group 1 NH10_003217 PF13439 Glycosyltransferase Family 4 NH10_003218 PF17804 Tail specific protease N-terminal domain NH10_003218 PF03572 Peptidase family S41 NH10_003218 PF00595 PDZ domain NH10_003218 PF11818 C-terminal domain of tail specific protease (DUF3340) NH10_003219 PF00933 Glycosyl hydrolase family 3 N terminal domain NH10_003221 PF00561 alpha/beta hydrolase fold NH10_003222 PF00171 Aldehyde dehydrogenase family NH10_003223 PF00171 Aldehyde dehydrogenase family NH10_003224 PF01202 Shikimate kinase NH10_003225 PF02447 GntP family permease NH10_003226 PF01081 KDPG and KHG aldolase NH10_003227 PF00920 Dehydratase family NH10_003228 PF00871 Acetokinase family NH10_003229 PF01515 Phosphate acetyl/butaryl transferase NH10_003229 PF07085 DRTGG domain NH10_003230 PF05681 Fumarate hydratase (Fumerase) NH10_003230 PF05683 Fumarase C-terminus NH10_003233 PF07724 AAA domain (Cdc48 subfamily) NH10_003233 PF10431 C-terminal, D2-small domain, of ClpB protein NH10_003233 PF06689 ClpX C4-type zinc finger NH10_003234 PF00574 Clp protease NH10_003235 PF05697 Bacterial trigger factor protein (TF) NH10_003235 PF05698 Bacterial trigger factor protein (TF) C-terminus NH10_003235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH10_003236 PF07715 TonB-dependent Receptor Plug Domain NH10_003236 PF00593 TonB dependent receptor NH10_003237 PF13640 2OG-Fe(II) oxygenase superfamily NH10_003237 PF18331 PKHD-type hydroxylase C-terminal domain NH10_003238 PF00682 HMGL-like NH10_003238 PF08502 LeuA allosteric (dimerisation) domain NH10_003239 PF00561 alpha/beta hydrolase fold NH10_003240 PF00561 alpha/beta hydrolase fold NH10_003240 PF07021 Methionine biosynthesis protein MetW NH10_003242 PF01725 Ham1 family NH10_003244 PF02416 mttA/Hcf106 family NH10_003245 PF02416 mttA/Hcf106 family NH10_003246 PF00902 Sec-independent protein translocase protein (TatC) NH10_003250 PF01790 Prolipoprotein diacylglyceryl transferase NH10_003253 PF00303 Thymidylate synthase NH10_003254 PF00186 Dihydrofolate reductase NH10_003256 PF01625 Peptide methionine sulfoxide reductase NH10_003258 PF01618 MotA/TolQ/ExbB proton channel family NH10_003260 PF00551 Formyl transferase NH10_003260 PF01842 ACT domain NH10_003262 PF00171 Aldehyde dehydrogenase family NH10_003263 PF00830 Ribosomal L28 family NH10_003264 PF00471 Ribosomal protein L33 NH10_003265 PF02254 TrkA-N domain NH10_003265 PF00999 Sodium/hydrogen exchanger family NH10_003269 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NH10_003270 PF00580 UvrD/REP helicase N-terminal domain NH10_003270 PF13361 UvrD-like helicase C-terminal domain NH10_003273 PF01396 Topoisomerase DNA binding C4 zinc finger NH10_003273 PF01751 Toprim domain NH10_003273 PF01131 DNA topoisomerase NH10_003273 PF08272 Topoisomerase I zinc-ribbon-like NH10_003275 PF01638 HxlR-like helix-turn-helix NH10_003276 PF08240 Alcohol dehydrogenase GroES-like domain NH10_003276 PF00107 Zinc-binding dehydrogenase NH10_003277 PF04102 SlyX NH10_003278 PF00005 ABC transporter NH10_003278 PF16326 ABC transporter C-terminal domain NH10_003278 PF12848 ABC transporter NH10_003279 PF01810 LysE type translocator NH10_003280 PF03279 Bacterial lipid A biosynthesis acyltransferase NH10_003282 PF00375 Sodium:dicarboxylate symporter family NH10_003284 PF01118 Semialdehyde dehydrogenase, NAD binding domain NH10_003284 PF02774 Semialdehyde dehydrogenase, dimerisation domain NH10_003288 PF01416 tRNA pseudouridine synthase NH10_003290 PF01176 Translation initiation factor 1A / IF-1 NH10_003293 PF00180 Isocitrate/isopropylmalate dehydrogenase NH10_003295 PF00694 Aconitase C-terminal domain NH10_003296 PF00330 Aconitase family (aconitate hydratase) NH10_003298 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_003298 PF03466 LysR substrate binding domain NH10_003300 PF00293 NUDIX domain NH10_003301 PF01590 GAF domain NH10_003301 PF05524 PEP-utilising enzyme, N-terminal NH10_003301 PF00391 PEP-utilising enzyme, mobile domain NH10_003301 PF02896 PEP-utilising enzyme, TIM barrel domain NH10_003302 PF00141 Peroxidase NH10_003303 PF12706 Beta-lactamase superfamily domain NH10_003304 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_003304 PF03466 LysR substrate binding domain NH10_003306 PF02798 Glutathione S-transferase, N-terminal domain NH10_003307 PF08279 HTH domain NH10_003307 PF13280 WYL domain NH10_003308 PF13419 Haloacid dehalogenase-like hydrolase NH10_003309 PF00849 RNA pseudouridylate synthase NH10_003309 PF01479 S4 domain NH10_003310 PF12111 Polyribonucleotide phosphorylase C terminal NH10_003310 PF10150 Ribonuclease E/G family NH10_003310 PF00575 S1 RNA binding domain NH10_003311 PF00501 AMP-binding enzyme NH10_003311 PF13193 AMP-binding enzyme C-terminal domain NH10_003312 PF03466 LysR substrate binding domain NH10_003312 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_003313 PF00106 short chain dehydrogenase NH10_003314 PF06969 HemN C-terminal domain NH10_003314 PF04055 Radical SAM superfamily NH10_003316 PF01554 MatE NH10_003317 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_003317 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NH10_003317 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_003318 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NH10_003318 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_003319 PF03109 ABC1 family NH10_003320 PF01197 Ribosomal protein L31 NH10_003322 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NH10_003324 PF13247 4Fe-4S dicluster domain NH10_003324 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NH10_003324 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_003326 PF03884 DNA gyrase inhibitor YacG NH10_003327 PF00753 Metallo-beta-lactamase superfamily NH10_003328 PF00762 Ferrochelatase NH10_003330 PF01177 Asp/Glu/Hydantoin racemase NH10_003334 PF01206 Sulfurtransferase TusA NH10_003335 PF00571 CBS domain NH10_003335 PF03471 Transporter associated domain NH10_003336 PF00795 Carbon-nitrogen hydrolase NH10_003337 PF01588 Putative tRNA binding domain NH10_003339 PF07963 Prokaryotic N-terminal methylation motif NH10_003339 PF08334 Type II secretion system (T2SS), protein G NH10_003340 PF00482 Type II secretion system (T2SS), protein F NH10_003341 PF00270 DEAD/DEAH box helicase NH10_003341 PF00271 Helicase conserved C-terminal domain NH10_003341 PF17764 3′ DNA-binding domain (3′BD) NH10_003341 PF18074 Primosomal protein N C-terminal domain NH10_003341 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NH10_003342 PF02254 TrkA-N domain NH10_003342 PF00999 Sodium/hydrogen exchanger family NH10_003343 PF01430 Hsp33 protein NH10_003345 PF00226 DnaJ domain NH10_003345 PF01556 DnaJ C terminal domain NH10_003347 PF01544 CorA-like Mg2+ transporter protein NH10_003348 PF00575 S1 RNA binding domain NH10_003348 PF00013 KH domain NH10_003348 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NH10_003348 PF03725 3' exoribonuclease family, domain 2 NH10_003348 PF01138 3' exoribonuclease family, domain 1 NH10_003349 PF00312 Ribosomal protein S15 NH10_003350 PF00144 Beta-lactamase NH10_003351 PF13538 UvrD-like helicase C-terminal domain NH10_003352 PF12705 PD-(D/E)XK nuclease superfamily NH10_003352 PF00580 UvrD/REP helicase N-terminal domain NH10_003352 PF13361 UvrD-like helicase C-terminal domain NH10_003353 PF17946 RecC C-terminal domain NH10_003355 PF03976 Polyphosphate kinase 2 (PPK2) NH10_003357 PF01209 ubiE/COQ5 methyltransferase family NH10_003359 PF03109 ABC1 family NH10_003360 PF01494 FAD binding domain NH10_003361 PF01502 Phosphoribosyl-AMP cyclohydrolase NH10_003364 PF13244 Domain of unknown function (DUF4040) NH10_003364 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NH10_003364 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NH10_003364 PF00361 Proton-conducting membrane transporter NH10_003365 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NH10_003366 PF00361 Proton-conducting membrane transporter NH10_003367 PF01899 Na+/H+ ion antiporter subunit NH10_003368 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NH10_003369 PF03334 Na+/H+ antiporter subunit NH10_003370 PF02033 Ribosome-binding factor A NH10_003371 PF11987 Translation-initiation factor 2 NH10_003371 PF04760 Translation initiation factor IF-2, N-terminal region NH10_003371 PF00009 Elongation factor Tu GTP binding domain NH10_003371 PF08364 Bacterial translation initiation factor IF-2 associated region NH10_003372 PF13184 NusA-like KH domain NH10_003372 PF08529 NusA N-terminal domain NH10_003372 PF00575 S1 RNA binding domain NH10_003373 PF02576 RimP N-terminal domain NH10_003373 PF17384 RimP C-terminal SH3 domain NH10_003374 PF03840 Preprotein translocase SecG subunit NH10_003375 PF00121 Triosephosphate isomerase NH10_003376 PF00437 Type II/IV secretion system protein NH10_003376 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NH10_003377 PF00482 Type II secretion system (T2SS), protein F NH10_003378 PF06750 Bacterial Peptidase A24 N-terminal domain NH10_003378 PF01478 Type IV leader peptidase family NH10_003379 PF01121 Dephospho-CoA kinase NH10_003381 PF08032 RNA 2'-O ribose methyltransferase substrate binding NH10_003381 PF00588 SpoU rRNA Methylase family NH10_003382 PF06865 Pyrimidine/purine nucleoside phosphorylase NH10_003384 PF02463 RecF/RecN/SMC N terminal domain NH10_003385 PF02622 Uncharacterized ACR, COG1678 NH10_003386 PF03652 Holliday junction resolvase NH10_003387 PF13533 Biotin-lipoyl like NH10_003392 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NH10_003392 PF12833 Helix-turn-helix domain NH10_003392 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NH10_003392 PF02805 Metal binding domain of Ada NH10_003393 PF01066 CDP-alcohol phosphatidyltransferase NH10_003395 PF01541 GIY-YIG catalytic domain NH10_003395 PF02151 UvrB/uvrC motif NH10_003395 PF08459 UvrC Helix-hairpin-helix N-terminal NH10_003399 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NH10_003399 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NH10_003399 PF00378 Enoyl-CoA hydratase/isomerase NH10_003400 PF02803 Thiolase, C-terminal domain NH10_003400 PF00108 Thiolase, N-terminal domain NH10_003403 PF09278 MerR, DNA binding NH10_003403 PF00376 MerR family regulatory protein NH10_003405 PF01323 DSBA-like thioredoxin domain NH10_003408 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_003408 PF00183 Hsp90 protein NH10_003411 PF03553 Na+/H+ antiporter family NH10_003411 PF13726 Na+-H+ antiporter family NH10_003416 PF04997 RNA polymerase Rpb1, domain 1 NH10_003416 PF00623 RNA polymerase Rpb1, domain 2 NH10_003416 PF04983 RNA polymerase Rpb1, domain 3 NH10_003416 PF05000 RNA polymerase Rpb1, domain 4 NH10_003416 PF04998 RNA polymerase Rpb1, domain 5 NH10_003417 PF04563 RNA polymerase beta subunit NH10_003417 PF04561 RNA polymerase Rpb2, domain 2 NH10_003417 PF04565 RNA polymerase Rpb2, domain 3 NH10_003417 PF10385 RNA polymerase beta subunit external 1 domain NH10_003417 PF00562 RNA polymerase Rpb2, domain 6 NH10_003417 PF04560 RNA polymerase Rpb2, domain 7 NH10_003418 PF00542 Ribosomal protein L7/L12 C-terminal domain NH10_003418 PF16320 Ribosomal protein L7/L12 dimerisation domain NH10_003419 PF00466 Ribosomal protein L10 NH10_003420 PF00687 Ribosomal protein L1p/L10e family NH10_003421 PF00298 Ribosomal protein L11, RNA binding domain NH10_003421 PF03946 Ribosomal protein L11, N-terminal domain NH10_003422 PF00467 KOW motif NH10_003422 PF02357 Transcription termination factor nusG NH10_003423 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NH10_003424 PF00009 Elongation factor Tu GTP binding domain NH10_003424 PF03143 Elongation factor Tu C-terminal domain NH10_003424 PF03144 Elongation factor Tu domain 2 NH10_003425 PF04715 Anthranilate synthase component I, N terminal region NH10_003425 PF00425 chorismate binding enzyme NH10_003426 PF13419 Haloacid dehalogenase-like hydrolase NH10_003427 PF12401 Protein of unknown function (DUF2662) NH10_003427 PF00498 FHA domain NH10_003428 PF03958 Bacterial type II/III secretion system short domain NH10_003428 PF00263 Bacterial type II and III secretion system protein NH10_003431 PF00816 H-NS histone family NH10_003436 PF03900 Porphobilinogen deaminase, C-terminal domain NH10_003436 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NH10_003437 PF04397 LytTr DNA-binding domain NH10_003437 PF00072 Response regulator receiver domain NH10_003438 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_003438 PF06580 Histidine kinase NH10_003438 PF07694 5TMR of 5TMR-LYT NH10_003439 PF14698 Argininosuccinate lyase C-terminal NH10_003439 PF00206 Lyase NH10_003440 PF04362 Bacterial Fe(2+) trafficking NH10_003441 PF01895 PhoU domain NH10_003442 PF02321 Outer membrane efflux protein NH10_003443 PF00892 EamA-like transporter family NH10_003446 PF13667 ThiC-associated domain NH10_003446 PF01964 Radical SAM ThiC family NH10_003447 PF00293 NUDIX domain NH10_003448 PF00149 Calcineurin-like phosphoesterase NH10_003449 PF01258 Prokaryotic dksA/traR C4-type zinc finger NH10_003450 PF00749 tRNA synthetases class I (E and Q), catalytic domain NH10_003451 PF01098 Cell cycle protein NH10_003452 PF02875 Mur ligase family, glutamate ligase domain NH10_003452 PF08245 Mur ligase middle domain NH10_003454 PF07664 Ferrous iron transport protein B C terminus NH10_003454 PF02421 Ferrous iron transport protein B NH10_003454 PF07670 Nucleoside recognition NH10_003456 PF00589 Phage integrase family NH10_003456 PF02899 Phage integrase, N-terminal SAM-like domain NH10_003457 PF13098 Thioredoxin-like domain NH10_003457 PF10411 Disulfide bond isomerase protein N-terminus NH10_003458 PF03447 Homoserine dehydrogenase, NAD binding domain NH10_003458 PF01842 ACT domain NH10_003458 PF00742 Homoserine dehydrogenase NH10_003459 PF00291 Pyridoxal-phosphate dependent enzyme NH10_003460 PF00768 D-alanyl-D-alanine carboxypeptidase NH10_003461 PF00196 Bacterial regulatory proteins, luxR family NH10_003461 PF00072 Response regulator receiver domain NH10_003462 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH10_003462 PF00512 His Kinase A (phospho-acceptor) domain NH10_003463 PF00072 Response regulator receiver domain NH10_003463 PF00158 Sigma-54 interaction domain NH10_003463 PF02954 Bacterial regulatory protein, Fis family NH10_003464 PF03572 Peptidase family S41 NH10_003464 PF00595 PDZ domain NH10_003465 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NH10_003465 PF01676 Metalloenzyme superfamily NH10_003466 PF03739 Lipopolysaccharide export system permease LptF/LptG NH10_003468 PF00883 Cytosol aminopeptidase family, catalytic domain NH10_003468 PF02789 Cytosol aminopeptidase family, N-terminal domain NH10_003472 PF00677 Lumazine binding domain NH10_003474 PF01872 RibD C-terminal domain NH10_003474 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NH10_003475 PF03477 ATP cone domain NH10_003476 PF00909 Ammonium Transporter Family NH10_003477 PF00543 Nitrogen regulatory protein P-II NH10_003479 PF01078 Magnesium chelatase, subunit ChlI NH10_003479 PF13335 Magnesium chelatase, subunit ChlI C-terminal NH10_003481 PF00916 Sulfate permease family NH10_003481 PF01740 STAS domain NH10_003484 PF01252 Signal peptidase (SPase) II NH10_003486 PF13411 MerR HTH family regulatory protein NH10_003487 PF03743 Bacterial conjugation TrbI-like protein NH10_003488 PF02796 Helix-turn-helix domain of resolvase NH10_003488 PF00239 Resolvase, N terminal domain NH10_003491 PF00809 Pterin binding enzyme NH10_003492 PF00893 Small Multidrug Resistance protein NH10_003493 PF01909 Nucleotidyltransferase domain NH10_003493 PF13427 Domain of unknown function (DUF4111) NH10_003495 PF00583 Acetyltransferase (GNAT) family NH10_003496 PF13495 Phage integrase, N-terminal SAM-like domain NH10_003496 PF00589 Phage integrase family NH10_003497 PF13610 DDE domain NH10_003498 PF01636 Phosphotransferase enzyme family NH10_003499 PF13610 DDE domain NH10_003500 PF02796 Helix-turn-helix domain of resolvase NH10_003500 PF00239 Resolvase, N terminal domain NH10_003501 PF01526 Tn3 transposase DDE domain NH10_003501 PF13700 Domain of unknown function (DUF4158) NH10_003503 PF02796 Helix-turn-helix domain of resolvase NH10_003503 PF00239 Resolvase, N terminal domain NH10_003504 PF13700 Domain of unknown function (DUF4158) NH10_003504 PF01526 Tn3 transposase DDE domain NH10_003505 PF03400 IS1 transposase NH10_003506 PF00302 Chloramphenicol acetyltransferase NH10_003507 PF13700 Domain of unknown function (DUF4158) NH10_003507 PF01526 Tn3 transposase DDE domain NH10_003508 PF00892 EamA-like transporter family NH10_003509 PF07690 Major Facilitator Superfamily NH10_003510 PF02909 Tetracyclin repressor-like, C-terminal domain NH10_003510 PF00440 Bacterial regulatory proteins, tetR family NH10_003511 PF09278 MerR, DNA binding NH10_003511 PF00376 MerR family regulatory protein NH10_003513 PF03203 MerC mercury resistance protein NH10_003514 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_003514 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NH10_003514 PF00403 Heavy-metal-associated domain NH10_003515 PF13411 MerR HTH family regulatory protein NH10_003516 PF11809 Domain of unknown function (DUF3330) NH10_003516 PF00563 EAL domain NH10_003520 PF00809 Pterin binding enzyme NH10_003523 PF01396 Topoisomerase DNA binding C4 zinc finger NH10_003523 PF01131 DNA topoisomerase NH10_003523 PF01751 Toprim domain NH10_003526 PF01252 Signal peptidase (SPase) II NH10_003528 PF13411 MerR HTH family regulatory protein NH10_003529 PF00582 Universal stress protein family NH10_003530 PF03960 ArsC family NH10_003531 PF01022 Bacterial regulatory protein, arsR family NH10_003533 PF01758 Sodium Bile acid symporter family NH10_003534 PF03358 NADPH-dependent FMN reductase NH10_003535 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH10_003540 PF00665 Integrase core domain NH10_003542 PF13335 Magnesium chelatase, subunit ChlI C-terminal NH10_003542 PF01078 Magnesium chelatase, subunit ChlI NH10_003543 PF00155 Aminotransferase class I and II NH10_003543 PF00392 Bacterial regulatory proteins, gntR family NH10_003545 PF00701 Dihydrodipicolinate synthetase family NH10_003547 PF03573 outer membrane porin, OprD family NH10_003548 PF00719 Inorganic pyrophosphatase NH10_003551 PF00501 AMP-binding enzyme NH10_003551 PF13193 AMP-binding enzyme C-terminal domain NH10_003552 PF03989 DNA gyrase C-terminal domain, beta-propeller NH10_003552 PF00521 DNA gyrase/topoisomerase IV, subunit A NH10_003553 PF07690 Major Facilitator Superfamily NH10_003554 PF03458 UPF0126 domain NH10_003555 PF02810 SEC-C motif NH10_003556 PF03741 Integral membrane protein TerC family NH10_003556 PF03471 Transporter associated domain NH10_003557 PF03641 Possible lysine decarboxylase NH10_003558 PF07690 Major Facilitator Superfamily NH10_003560 PF00817 impB/mucB/samB family NH10_003560 PF11798 IMS family HHH motif NH10_003560 PF11799 impB/mucB/samB family C-terminal domain NH10_003563 PF11842 Domain of unknown function (DUF3362) NH10_003563 PF04055 Radical SAM superfamily NH10_003563 PF08497 Radical SAM N-terminal NH10_003567 PF03358 NADPH-dependent FMN reductase NH10_003569 PF00291 Pyridoxal-phosphate dependent enzyme NH10_003576 PF01327 Polypeptide deformylase NH10_003578 PF02481 DNA recombination-mediator protein A NH10_003578 PF17782 DprA winged helix domain NH10_003579 PF01300 Telomere recombination NH10_003580 PF00892 EamA-like transporter family NH10_003581 PF00440 Bacterial regulatory proteins, tetR family NH10_003582 PF07690 Major Facilitator Superfamily NH10_003584 PF00255 Glutathione peroxidase NH10_003586 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NH10_003587 PF02874 ATP synthase alpha/beta family, beta-barrel domain NH10_003587 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NH10_003588 PF00231 ATP synthase NH10_003589 PF02874 ATP synthase alpha/beta family, beta-barrel domain NH10_003589 PF00306 ATP synthase alpha/beta chain, C terminal domain NH10_003589 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NH10_003590 PF00213 ATP synthase delta (OSCP) subunit NH10_003591 PF00430 ATP synthase B/B' CF(0) NH10_003592 PF00137 ATP synthase subunit C NH10_003593 PF00119 ATP synthase A chain NH10_003597 PF00005 ABC transporter NH10_003598 PF00950 ABC 3 transport family NH10_003599 PF01810 LysE type translocator NH10_003600 PF04261 Dyp-type peroxidase family NH10_003601 PF00390 Malic enzyme, N-terminal domain NH10_003601 PF03949 Malic enzyme, NAD binding domain NH10_003602 PF03485 Arginyl tRNA synthetase N terminal domain NH10_003602 PF00750 tRNA synthetases class I (R) NH10_003602 PF05746 DALR anticodon binding domain NH10_003606 PF02678 Pirin NH10_003606 PF05726 Pirin C-terminal cupin domain NH10_003608 PF03551 Transcriptional regulator PadR-like family NH10_003609 PF01909 Nucleotidyltransferase domain NH10_003609 PF13427 Domain of unknown function (DUF4111) NH10_003610 PF02540 NAD synthase NH10_003610 PF00958 GMP synthase C terminal domain NH10_003610 PF00117 Glutamine amidotransferase class-I NH10_003611 PF04286 Protein of unknown function (DUF445) NH10_003612 PF07681 DoxX NH10_003613 PF09335 SNARE associated Golgi protein NH10_003616 PF13614 AAA domain NH10_003618 PF01722 BolA-like protein NH10_003619 PF01648 4'-phosphopantetheinyl transferase superfamily NH10_003620 PF12697 Alpha/beta hydrolase family NH10_003623 PF13193 AMP-binding enzyme C-terminal domain NH10_003623 PF00668 Condensation domain NH10_003623 PF00550 Phosphopantetheine attachment site NH10_003623 PF00975 Thioesterase domain NH10_003623 PF00501 AMP-binding enzyme NH10_003624 PF00975 Thioesterase domain NH10_003624 PF14765 Polyketide synthase dehydratase NH10_003624 PF00550 Phosphopantetheine attachment site NH10_003624 PF08242 Methyltransferase domain NH10_003624 PF02801 Beta-ketoacyl synthase, C-terminal domain NH10_003624 PF00109 Beta-ketoacyl synthase, N-terminal domain NH10_003624 PF16197 Ketoacyl-synthetase C-terminal extension NH10_003625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_003625 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_003625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_003626 PF00501 AMP-binding enzyme NH10_003627 PF00196 Bacterial regulatory proteins, luxR family NH10_003627 PF03472 Autoinducer binding domain NH10_003629 PF00765 Autoinducer synthase NH10_003630 PF00083 Sugar (and other) transporter NH10_003630 PF07690 Major Facilitator Superfamily NH10_003631 PF00378 Enoyl-CoA hydratase/isomerase NH10_003632 PF00378 Enoyl-CoA hydratase/isomerase NH10_003633 PF02770 Acyl-CoA dehydrogenase, middle domain NH10_003633 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH10_003633 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH10_003634 PF00501 AMP-binding enzyme NH10_003634 PF13193 AMP-binding enzyme C-terminal domain NH10_003635 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NH10_003635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NH10_003636 PF00171 Aldehyde dehydrogenase family NH10_003638 PF00324 Amino acid permease NH10_003639 PF00324 Amino acid permease NH10_003640 PF01042 Endoribonuclease L-PSP NH10_003641 PF00842 Alanine racemase, C-terminal domain NH10_003641 PF01168 Alanine racemase, N-terminal domain NH10_003642 PF01266 FAD dependent oxidoreductase NH10_003643 PF01037 Lrp/AsnC ligand binding domain NH10_003645 PF00593 TonB dependent receptor NH10_003645 PF07715 TonB-dependent Receptor Plug Domain NH10_003648 PF00849 RNA pseudouridylate synthase NH10_003651 PF00872 Transposase, Mutator family NH10_003653 PF13737 Transposase DDE domain NH10_003655 PF00330 Aconitase family (aconitate hydratase) NH10_003655 PF00694 Aconitase C-terminal domain NH10_003656 PF00285 Citrate synthase, C-terminal domain NH10_003658 PF00392 Bacterial regulatory proteins, gntR family NH10_003658 PF07729 FCD domain NH10_003659 PF00155 Aminotransferase class I and II NH10_003660 PF09330 D-lactate dehydrogenase, membrane binding NH10_003660 PF01565 FAD binding domain NH10_003661 PF01070 FMN-dependent dehydrogenase NH10_003662 PF00392 Bacterial regulatory proteins, gntR family NH10_003662 PF07729 FCD domain NH10_003663 PF02652 L-lactate permease NH10_003664 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NH10_003664 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NH10_003664 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NH10_003664 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NH10_003665 PF16363 GDP-mannose 4,6 dehydratase NH10_003666 PF00342 Phosphoglucose isomerase NH10_003667 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NH10_003667 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NH10_003667 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NH10_003668 PF00483 Nucleotidyl transferase NH10_003670 PF02719 Polysaccharide biosynthesis protein NH10_003671 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NH10_003672 PF14602 Hexapeptide repeat of succinyl-transferase NH10_003672 PF17836 PglD N-terminal domain NH10_003672 PF00132 Bacterial transferase hexapeptide (six repeats) NH10_003673 PF02397 Bacterial sugar transferase NH10_003679 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NH10_003680 PF00132 Bacterial transferase hexapeptide (six repeats) NH10_003681 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NH10_003681 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NH10_003682 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NH10_003682 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NH10_003682 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NH10_003683 PF18412 Outer-membrane lipoprotein Wza C-terminal domain NH10_003683 PF02563 Polysaccharide biosynthesis/export protein NH10_003683 PF10531 SLBB domain NH10_003684 PF01451 Low molecular weight phosphotyrosine protein phosphatase NH10_003685 PF02706 Chain length determinant protein NH10_003685 PF13807 G-rich domain on putative tyrosine kinase NH10_003685 PF13614 AAA domain NH10_003686 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NH10_003686 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH10_003687 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NH10_003687 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH10_003688 PF03023 Lipid II flippase MurJ NH10_003689 PF01510 N-acetylmuramoyl-L-alanine amidase NH10_003690 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NH10_003690 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NH10_003692 PF04185 Phosphoesterase family NH10_003692 PF05506 Domain of unknown function (DUF756) NH10_003693 PF00487 Fatty acid desaturase NH10_003694 PF00175 Oxidoreductase NAD-binding domain NH10_003695 PF00440 Bacterial regulatory proteins, tetR family NH10_003696 PF00440 Bacterial regulatory proteins, tetR family NH10_003696 PF08360 QacR-like protein, C-terminal region NH10_003697 PF01323 DSBA-like thioredoxin domain NH10_003699 PF13419 Haloacid dehalogenase-like hydrolase NH10_003700 PF00106 short chain dehydrogenase NH10_003703 PF00583 Acetyltransferase (GNAT) family NH10_003703 PF00696 Amino acid kinase family NH10_003704 PF09084 NMT1/THI5 like NH10_003705 PF09084 NMT1/THI5 like NH10_003706 PF00296 Luciferase-like monooxygenase NH10_003707 PF00528 Binding-protein-dependent transport system inner membrane component NH10_003708 PF00005 ABC transporter NH10_003709 PF08362 YcdC-like protein, C-terminal region NH10_003709 PF00440 Bacterial regulatory proteins, tetR family NH10_003710 PF01048 Phosphorylase superfamily NH10_003712 PF01687 Riboflavin kinase NH10_003712 PF06574 FAD synthetase NH10_003713 PF00133 tRNA synthetases class I (I, L, M and V) NH10_003713 PF06827 Zinc finger found in FPG and IleRS NH10_003713 PF08264 Anticodon-binding domain of tRNA NH10_003714 PF01252 Signal peptidase (SPase) II NH10_003715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH10_003718 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NH10_003719 PF07859 alpha/beta hydrolase fold NH10_003723 PF03466 LysR substrate binding domain NH10_003723 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH10_003724 PF01025 GrpE NH10_003725 PF00012 Hsp70 protein NH10_003729 PF13406 Transglycosylase SLT domain NH10_003731 PF02222 ATP-grasp domain NH10_003731 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NH10_003732 PF00731 AIR carboxylase NH10_003734 PF01225 Mur ligase family, catalytic domain NH10_003734 PF02875 Mur ligase family, glutamate ligase domain NH10_003734 PF08245 Mur ligase middle domain NH10_003736 PF01569 PAP2 superfamily NH10_003737 PF03741 Integral membrane protein TerC family NH10_003739 PF03738 Glutathionylspermidine synthase preATP-grasp NH10_003740 PF00355 Rieske [2Fe-2S] domain NH10_003741 PF01979 Amidohydrolase family NH10_003743 PF00156 Phosphoribosyl transferase domain NH10_003745 PF13098 Thioredoxin-like domain NH10_003745 PF10411 Disulfide bond isomerase protein N-terminus NH10_003746 PF01545 Cation efflux family NH10_003746 PF16916 Dimerisation domain of Zinc Transporter NH10_003747 PF02583 Metal-sensitive transcriptional repressor NH10_003748 PF10396 GTP-binding protein TrmE N-terminus NH10_003748 PF01926 50S ribosome-binding GTPase NH10_003748 PF12631 MnmE helical domain NH10_003749 PF14849 YidC periplasmic domain NH10_003749 PF02096 60Kd inner membrane protein NH10_003750 PF01809 Putative membrane protein insertion efficiency factor NH10_003751 PF00825 Ribonuclease P NH10_003752 PF00468 Ribosomal protein L34 NH10_003853 PF07715 TonB-dependent Receptor Plug Domain NH10_003853 PF00593 TonB dependent receptor