locus-tag class description EP560_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site EP560_00005 IPR013317 Chromosomal replication initiator protein DnaA EP560_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal EP560_00005 IPR024633 DnaA N-terminal domain EP560_00005 IPR038454 DnaA, N-terminal domain superfamily EP560_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_00005 IPR003593 AAA+ ATPase domain EP560_00005 IPR020591 Chromosomal replication control, initiator DnaA-like EP560_00005 IPR010921 Trp repressor/replication initiator EP560_00005 IPR001957 Chromosomal replication control, initiator DnaA EP560_00010 IPR001001 DNA polymerase III, beta sliding clamp EP560_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal EP560_00010 IPR022637 DNA polymerase III, beta sliding clamp, central EP560_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal EP560_00015 IPR001238 DNA-binding, RecF EP560_00015 IPR042174 DNA-binding RecF, domain 2 EP560_00015 IPR003395 RecF/RecN/SMC, N-terminal EP560_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_00020 IPR006171 TOPRIM domain EP560_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain EP560_00020 IPR003594 Histidine kinase/HSP90-like ATPase EP560_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 EP560_00020 IPR041423 DNA gyrase subunit B insert domain EP560_00020 IPR011557 DNA gyrase, subunit B EP560_00020 IPR002288 DNA gyrase B subunit, C-terminal EP560_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal EP560_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily EP560_00020 IPR001241 DNA topoisomerase, type IIA EP560_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP560_00020 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_00020 IPR018522 DNA topoisomerase, type IIA, conserved site EP560_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_00030 IPR032818 DedA family EP560_00030 IPR032816 SNARE associated Golgi protein EP560_00035 IPR017871 ABC transporter, conserved site EP560_00035 IPR003439 ABC transporter-like EP560_00035 IPR032781 ABC-transporter extension domain EP560_00035 IPR003593 AAA+ ATPase domain EP560_00035 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_00040 IPR038404 TRAP transporter solute receptor DctP superfamily EP560_00045 IPR038404 TRAP transporter solute receptor DctP superfamily EP560_00050 IPR038404 TRAP transporter solute receptor DctP superfamily EP560_00055 IPR000361 FeS cluster biogenesis EP560_00055 IPR016092 FeS cluster insertion protein EP560_00055 IPR023063 FeS cluster insertion protein ErpA EP560_00055 IPR017870 FeS cluster insertion, C-terminal, conserved site EP560_00055 IPR035903 HesB-like domain superfamily EP560_00060 IPR029058 Alpha/Beta hydrolase fold EP560_00060 IPR000639 Epoxide hydrolase-like EP560_00060 IPR000073 Alpha/beta hydrolase fold-1 EP560_00065 IPR005338 Anhydro-N-acetylmuramic acid kinase EP560_00070 IPR036986 RNA-binding S4 domain superfamily EP560_00070 IPR002942 RNA-binding S4 domain EP560_00070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_00070 IPR002305 Aminoacyl-tRNA synthetase, class Ic EP560_00070 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site EP560_00070 IPR024088 Tyrosine-tRNA ligase, bacterial-type EP560_00070 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 EP560_00070 IPR002307 Tyrosine-tRNA ligase EP560_00110 IPR005856 Cysteine synthase EP560_00110 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP560_00110 IPR001926 Pyridoxal-phosphate dependent enzyme EP560_00110 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site EP560_00110 IPR005859 Cysteine synthase CysK EP560_00120 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic EP560_00120 IPR005025 NADPH-dependent FMN reductase-like EP560_00120 IPR010089 Flavoprotein WrbA-like EP560_00120 IPR029039 Flavoprotein-like superfamily EP560_00120 IPR008254 Flavodoxin/nitric oxide synthase EP560_00140 IPR020612 Methylthiotransferase, conserved site EP560_00140 IPR023404 Radical SAM, alpha/beta horseshoe EP560_00140 IPR022946 Uncharacterised protein family UPF0313 EP560_00140 IPR024560 Uncharacterised protein family UPF0313, C-terminal EP560_00140 IPR013704 Uncharacterised protein family UPF0313, N-terminal EP560_00140 IPR006638 Elp3/MiaB/NifB EP560_00140 IPR007197 Radical SAM EP560_00155 IPR036775 DNA polymerase, Y-family, little finger domain superfamily EP560_00155 IPR022880 DNA polymerase IV EP560_00155 IPR024728 DNA polymerase type-Y, HhH motif EP560_00155 IPR001126 UmuC domain EP560_00155 IPR017961 DNA polymerase, Y-family, little finger domain EP560_00165 IPR011701 Major facilitator superfamily EP560_00165 IPR020846 Major facilitator superfamily domain EP560_00165 IPR036259 MFS transporter superfamily EP560_00165 IPR004638 Drug resistance transporter EmrB-like EP560_00165 IPR023721 Multidrug resistance protein MdtD EP560_00170 IPR031100 LOG family EP560_00170 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG EP560_00175 IPR016169 FAD-binding, type PCMH, subdomain 2 EP560_00175 IPR005496 Integral membrane protein TerC EP560_00175 IPR005170 Transporter-associated domain EP560_00175 IPR036318 FAD-binding, type PCMH-like superfamily EP560_00175 IPR000644 CBS domain EP560_00180 IPR023006 Uncharacterised protein family UPF0225 EP560_00180 IPR032710 NTF2-like domain superfamily EP560_00180 IPR004027 SEC-C motif EP560_00185 IPR005115 Uncharacterised domain UPF0126 EP560_00190 IPR011701 Major facilitator superfamily EP560_00190 IPR020846 Major facilitator superfamily domain EP560_00190 IPR036259 MFS transporter superfamily EP560_00190 IPR005829 Sugar transporter, conserved site EP560_00195 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta EP560_00195 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat EP560_00195 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal EP560_00195 IPR013760 DNA topoisomerase, type IIA-like domain superfamily EP560_00195 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative EP560_00195 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily EP560_00195 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal EP560_00200 IPR000873 AMP-dependent synthetase/ligase EP560_00200 IPR025110 AMP-binding enzyme, C-terminal domain EP560_00200 IPR020845 AMP-binding, conserved site EP560_00200 IPR042099 AMP-dependent synthetase-like superfamily EP560_00215 IPR036649 Inorganic pyrophosphatase superfamily EP560_00215 IPR008162 Inorganic pyrophosphatase EP560_00220 IPR023614 Porin domain superfamily EP560_00220 IPR005318 Outer membrane porin, bacterial EP560_00235 IPR020624 Schiff base-forming aldolase, conserved site EP560_00235 IPR020625 Schiff base-forming aldolase, active site EP560_00235 IPR002220 DapA-like EP560_00235 IPR013785 Aldolase-type TIM barrel EP560_00235 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA EP560_00245 IPR036390 Winged helix DNA-binding domain superfamily EP560_00245 IPR004839 Aminotransferase, class I/classII EP560_00245 IPR000524 Transcription regulator HTH, GntR EP560_00245 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_00245 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_00245 IPR015424 Pyridoxal phosphate-dependent transferase EP560_00250 IPR000523 Magnesium chelatase ChlI domain EP560_00250 IPR025158 Mg chelatase-related protein, C-terminal domain EP560_00250 IPR004482 Mg chelatase-related protein EP560_00250 IPR001208 MCM domain EP560_00250 IPR003593 AAA+ ATPase domain EP560_00250 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_00250 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_00250 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP560_00260 IPR036397 Ribonuclease H superfamily EP560_00260 IPR012337 Ribonuclease H-like superfamily EP560_00260 IPR001584 Integrase, catalytic core EP560_00290 IPR006015 Universal stress protein A family EP560_00290 IPR006016 UspA EP560_00295 IPR018045 Sulphate anion transporter, conserved site EP560_00295 IPR011547 SLC26A/SulP transporter domain EP560_00295 IPR001902 SLC26A/SulP transporter EP560_00295 IPR002645 STAS domain EP560_00295 IPR036513 STAS domain superfamily EP560_00305 IPR020846 Major facilitator superfamily domain EP560_00305 IPR011701 Major facilitator superfamily EP560_00305 IPR005829 Sugar transporter, conserved site EP560_00305 IPR036259 MFS transporter superfamily EP560_00305 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG EP560_00310 IPR023772 DNA-binding HTH domain, TetR-type, conserved site EP560_00310 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP560_00310 IPR003012 Tetracycline transcriptional regulator, TetR EP560_00310 IPR004111 Tetracycline repressor TetR, C-terminal EP560_00310 IPR001647 DNA-binding HTH domain, TetR-type EP560_00310 IPR009057 Homeobox-like domain superfamily EP560_00335 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase EP560_00335 IPR011009 Protein kinase-like domain superfamily EP560_00340 IPR024165 Aminoglycoside 3-phosphotransferase EP560_00340 IPR011009 Protein kinase-like domain superfamily EP560_00340 IPR002575 Aminoglycoside phosphotransferase EP560_00350 IPR000523 Magnesium chelatase ChlI domain EP560_00350 IPR025158 Mg chelatase-related protein, C-terminal domain EP560_00350 IPR004482 Mg chelatase-related protein EP560_00350 IPR003593 AAA+ ATPase domain EP560_00350 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_00350 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_00360 IPR002332 Nitrogen regulatory protein P-II, urydylation site EP560_00360 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal EP560_00360 IPR011322 Nitrogen regulatory PII-like, alpha/beta EP560_00360 IPR002187 Nitrogen regulatory protein PII EP560_00360 IPR017918 Nitrogen regulatory protein PII, conserved site EP560_00365 IPR024041 Ammonium transporter AmtB-like domain EP560_00365 IPR001905 Ammonium transporter EP560_00365 IPR029020 Ammonium/urea transporter EP560_00365 IPR018047 Ammonium transporter, conserved site EP560_00370 IPR003796 Ribonucleotide reductase regulator NrdR-like EP560_00370 IPR005144 ATP-cone domain EP560_00375 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal EP560_00375 IPR002125 Cytidine and deoxycytidylate deaminase domain EP560_00375 IPR016193 Cytidine deaminase-like EP560_00375 IPR024072 Dihydrofolate reductase-like domain superfamily EP560_00375 IPR004794 Riboflavin biosynthesis protein RibD EP560_00375 IPR011549 Riboflavin-specific deaminase, C-terminal EP560_00375 IPR016192 APOBEC/CMP deaminase, zinc-binding EP560_00385 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily EP560_00385 IPR001783 Lumazine-binding protein EP560_00385 IPR026017 Lumazine-binding domain EP560_00385 IPR017938 Riboflavin synthase-like beta-barrel EP560_00405 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B EP560_00405 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal EP560_00405 IPR023042 Peptidase M17, leucine aminopeptidase EP560_00405 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal EP560_00415 IPR005495 Permease LptG/LptF-related EP560_00415 IPR030923 LPS export ABC transporter permease LptG EP560_00420 IPR011258 BPG-independent PGAM, N-terminal EP560_00420 IPR006124 Metalloenzyme EP560_00420 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily EP560_00420 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent EP560_00420 IPR017850 Alkaline-phosphatase-like, core domain superfamily EP560_00425 IPR029045 ClpP/crotonase-like domain superfamily EP560_00425 IPR001478 PDZ domain EP560_00425 IPR036034 PDZ superfamily EP560_00425 IPR004447 C-terminal-processing peptidase S41A EP560_00425 IPR005151 Tail specific protease EP560_00430 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 EP560_00430 IPR025944 Sigma-54 interaction domain, conserved site EP560_00430 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 EP560_00430 IPR002078 RNA polymerase sigma factor 54 interaction domain EP560_00430 IPR001789 Signal transduction response regulator, receiver domain EP560_00430 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_00430 IPR002197 DNA binding HTH domain, Fis-type EP560_00430 IPR009057 Homeobox-like domain superfamily EP560_00430 IPR003593 AAA+ ATPase domain EP560_00430 IPR011006 CheY-like superfamily EP560_00435 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP560_00435 IPR000014 PAS domain EP560_00435 IPR005467 Histidine kinase domain EP560_00435 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP560_00435 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP560_00435 IPR003594 Histidine kinase/HSP90-like ATPase EP560_00435 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_00440 IPR016032 Signal transduction response regulator, C-terminal effector EP560_00440 IPR011006 CheY-like superfamily EP560_00440 IPR001789 Signal transduction response regulator, receiver domain EP560_00440 IPR000792 Transcription regulator LuxR, C-terminal EP560_00445 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal EP560_00445 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A EP560_00445 IPR012338 Beta-lactamase/transpeptidase-like EP560_00450 IPR001926 Pyridoxal-phosphate dependent enzyme EP560_00450 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP560_00450 IPR026260 Threonine synthase, bacterial/archaeal EP560_00450 IPR004450 Threonine synthase-like EP560_00450 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site EP560_00455 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding EP560_00455 IPR016204 Homoserine dehydrogenase EP560_00455 IPR001342 Homoserine dehydrogenase, catalytic EP560_00455 IPR036291 NAD(P)-binding domain superfamily EP560_00455 IPR002912 ACT domain EP560_00455 IPR019811 Homoserine dehydrogenase, conserved site EP560_00460 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily EP560_00460 IPR036249 Thioredoxin-like superfamily EP560_00460 IPR013766 Thioredoxin domain EP560_00460 IPR017937 Thioredoxin, conserved site EP560_00460 IPR012336 Thioredoxin-like fold EP560_00460 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal EP560_00460 IPR033954 Disulphide bond isomerase, DsbC/G EP560_00465 IPR013762 Integrase-like, catalytic domain superfamily EP560_00465 IPR002104 Integrase, catalytic domain EP560_00465 IPR010998 Integrase/recombinase, N-terminal EP560_00465 IPR011010 DNA breaking-rejoining enzyme, catalytic core EP560_00465 IPR011932 Tyrosine recombinase XerD EP560_00465 IPR023009 Tyrosine recombinase XerC/XerD EP560_00465 IPR004107 Integrase, SAM-like, N-terminal EP560_00475 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_00475 IPR006073 GTP binding domain EP560_00475 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain EP560_00475 IPR003373 Ferrous iron transport protein B EP560_00475 IPR030389 FeoB-type guanine nucleotide-binding (G) domain EP560_00475 IPR011640 Ferrous iron transport protein B, C-terminal EP560_00485 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase EP560_00485 IPR013221 Mur ligase, central EP560_00485 IPR036565 Mur-like, catalytic domain superfamily EP560_00485 IPR036615 Mur ligase, C-terminal domain superfamily EP560_00485 IPR004101 Mur ligase, C-terminal EP560_00490 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA EP560_00490 IPR013437 Probable peptidoglycan glycosyltransferase FtsW EP560_00490 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site EP560_00495 IPR022380 Glutamyl-Q tRNA(Asp) synthetase EP560_00495 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_00495 IPR000924 Glutamyl/glutaminyl-tRNA synthetase EP560_00495 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain EP560_00500 IPR020458 Zinc finger, DksA/TraR C4-type conserved site EP560_00500 IPR000962 Zinc finger, DksA/TraR C4-type EP560_00500 IPR037187 DksA, N-terminal domain superfamily EP560_00500 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria EP560_00500 IPR012784 RNA polymerase-binding transcription factor DksA EP560_00505 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA EP560_00505 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type EP560_00505 IPR029052 Metallo-dependent phosphatase-like EP560_00510 IPR000086 NUDIX hydrolase domain EP560_00510 IPR015797 NUDIX hydrolase-like domain superfamily EP560_00510 IPR004385 Nucleoside diphosphate pyrophosphatase EP560_00515 IPR037509 Phosphomethylpyrimidine synthase EP560_00515 IPR025747 ThiC-associated domain EP560_00515 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B EP560_00515 IPR038521 ThiC/Bza superfamily EP560_00530 IPR004779 Carboxylate/Amino Acid/Amine Transporter EP560_00530 IPR000620 EamA domain EP560_00535 IPR003423 Outer membrane efflux protein EP560_00535 IPR010130 Type I secretion outer membrane protein, TolC EP560_00540 IPR026022 PhoU domain EP560_00540 IPR038078 PhoU-like domain superfamily EP560_00540 IPR028366 Phosphate transport system protein PhoU EP560_00545 IPR007457 Fe(II) trafficking protein YggX EP560_00545 IPR036766 Fe(II) trafficking protein YggX superfamily EP560_00550 IPR008948 L-Aspartase-like EP560_00550 IPR020557 Fumarate lyase, conserved site EP560_00550 IPR000362 Fumarate lyase family EP560_00550 IPR009049 Argininosuccinate lyase EP560_00550 IPR029419 Argininosuccinate lyase, C-terminal EP560_00550 IPR022761 Fumarate lyase, N-terminal EP560_00550 IPR024083 Fumarase/histidase, N-terminal EP560_00555 IPR003594 Histidine kinase/HSP90-like ATPase EP560_00555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_00555 IPR010559 Signal transduction histidine kinase, internal region EP560_00555 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region EP560_00555 IPR029016 GAF-like domain superfamily EP560_00560 IPR001789 Signal transduction response regulator, receiver domain EP560_00560 IPR007492 LytTR DNA-binding domain EP560_00560 IPR011006 CheY-like superfamily EP560_00565 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site EP560_00565 IPR022417 Porphobilinogen deaminase, N-terminal EP560_00565 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily EP560_00565 IPR000860 Porphobilinogen deaminase EP560_00565 IPR022418 Porphobilinogen deaminase, C-terminal EP560_00590 IPR001801 Histone-like protein H-NS EP560_00590 IPR027444 Histone-like protein H-NS, C-terminal domain EP560_00590 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily EP560_00605 IPR038591 NolW-like superfamily EP560_00605 IPR001775 GspD/PilQ family EP560_00605 IPR004845 Type II secretion system GspD, conserved site EP560_00605 IPR004846 Type II/III secretion system EP560_00605 IPR013356 Type II secretion system GspD EP560_00605 IPR005644 NolW-like EP560_00610 IPR008984 SMAD/FHA domain superfamily EP560_00610 IPR042287 FhaA, N-terminal EP560_00610 IPR000253 Forkhead-associated (FHA) domain EP560_00610 IPR022128 Domain of unknown function DUF3662 EP560_00615 IPR041492 Haloacid dehalogenase-like hydrolase EP560_00615 IPR036412 HAD-like superfamily EP560_00615 IPR006439 HAD hydrolase, subfamily IA EP560_00615 IPR037512 Phosphoglycolate phosphatase, prokaryotic EP560_00615 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic EP560_00615 IPR023214 HAD superfamily EP560_00615 IPR023198 Phosphoglycolate phosphatase-like, domain 2 EP560_00620 IPR006805 Anthranilate synthase component I, N-terminal EP560_00620 IPR005256 Anthranilate synthase component I, PabB-like EP560_00620 IPR015890 Chorismate-utilising enzyme, C-terminal EP560_00620 IPR005801 ADC synthase EP560_00620 IPR019999 Anthranilate synthase component I-like EP560_00645 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal EP560_00645 IPR000795 Transcription factor, GTP-binding domain EP560_00645 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal EP560_00645 IPR005225 Small GTP-binding protein domain EP560_00645 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle EP560_00645 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain EP560_00645 IPR009000 Translation protein, beta-barrel domain superfamily EP560_00645 IPR033720 Elongation factor Tu, domain 2 EP560_00645 IPR031157 Tr-type G domain, conserved site EP560_00645 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_00645 IPR004161 Translation elongation factor EFTu-like, domain 2 EP560_00655 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit EP560_00655 IPR038379 SecE superfamily EP560_00655 IPR005807 SecE subunit of protein translocation complex, bacterial-like EP560_00660 IPR008991 Translation protein SH3-like domain superfamily EP560_00660 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site EP560_00660 IPR001062 Transcription antitermination protein, NusG EP560_00660 IPR006645 NusG, N-terminal EP560_00660 IPR036735 NusG, N-terminal domain superfamily EP560_00660 IPR014722 Ribosomal protein L2, domain 2 EP560_00660 IPR005824 KOW EP560_00665 IPR020783 Ribosomal protein L11, C-terminal EP560_00665 IPR006519 Ribosomal protein L11, bacterial-type EP560_00665 IPR000911 Ribosomal protein L11/L12 EP560_00665 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily EP560_00665 IPR020784 Ribosomal protein L11, N-terminal EP560_00665 IPR020785 Ribosomal protein L11, conserved site EP560_00665 IPR036769 Ribosomal protein L11, C-terminal domain superfamily EP560_00670 IPR002143 Ribosomal protein L1 EP560_00670 IPR023674 Ribosomal protein L1-like EP560_00670 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich EP560_00670 IPR023673 Ribosomal protein L1, conserved site EP560_00670 IPR005878 Ribosomal protein L1, bacterial-type EP560_00670 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein EP560_00675 IPR022973 Ribosomal protein L10 EP560_00675 IPR002363 Ribosomal protein L10, eubacterial, conserved site EP560_00675 IPR001790 Ribosomal protein L10P EP560_00680 IPR013823 Ribosomal protein L7/L12, C-terminal EP560_00680 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily EP560_00680 IPR008932 Ribosomal protein L7/L12, oligomerisation EP560_00680 IPR000206 Ribosomal protein L7/L12 EP560_00680 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like EP560_00685 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily EP560_00685 IPR014724 RNA polymerase Rpb2, OB-fold EP560_00685 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily EP560_00685 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain EP560_00685 IPR007641 RNA polymerase Rpb2, domain 7 EP560_00685 IPR007645 RNA polymerase Rpb2, domain 3 EP560_00685 IPR007642 RNA polymerase Rpb2, domain 2 EP560_00685 IPR007644 RNA polymerase, beta subunit, protrusion EP560_00685 IPR007121 RNA polymerase, beta subunit, conserved site EP560_00685 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type EP560_00685 IPR015712 DNA-directed RNA polymerase, subunit 2 EP560_00685 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain EP560_00685 IPR037034 RNA polymerase Rpb2, domain 2 superfamily EP560_00690 IPR012754 DNA-directed RNA polymerase, subunit beta-prime EP560_00690 IPR000722 RNA polymerase, alpha subunit EP560_00690 IPR006592 RNA polymerase, N-terminal EP560_00690 IPR007080 RNA polymerase Rpb1, domain 1 EP560_00690 IPR007066 RNA polymerase Rpb1, domain 3 EP560_00690 IPR007083 RNA polymerase Rpb1, domain 4 EP560_00690 IPR038120 RNA polymerase Rpb1, funnel domain superfamily EP560_00690 IPR042102 RNA polymerase Rpb1, domain 3 superfamily EP560_00690 IPR007081 RNA polymerase Rpb1, domain 5 EP560_00715 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase EP560_00715 IPR000073 Alpha/beta hydrolase fold-1 EP560_00715 IPR029058 Alpha/Beta hydrolase fold EP560_00720 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal EP560_00720 IPR032813 Putative Na+/H+ antiporter, N-terminal EP560_00735 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_00735 IPR037196 HSP90, C-terminal domain EP560_00735 IPR001404 Heat shock protein Hsp90 family EP560_00735 IPR020575 Heat shock protein Hsp90, N-terminal EP560_00735 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_00735 IPR003594 Histidine kinase/HSP90-like ATPase EP560_00750 IPR036249 Thioredoxin-like superfamily EP560_00750 IPR001853 DSBA-like thioredoxin domain EP560_00760 IPR015358 Transcription regulator MerR, DNA binding EP560_00760 IPR000551 MerR-type HTH domain EP560_00760 IPR009061 Putative DNA-binding domain superfamily EP560_00760 IPR011789 Cu(I)-responsive transcriptional regulator EP560_00780 IPR020613 Thiolase, conserved site EP560_00780 IPR012805 Acetyl-CoA C-acyltransferase FadA EP560_00780 IPR002155 Thiolase EP560_00780 IPR016039 Thiolase-like EP560_00780 IPR020615 Thiolase, acyl-enzyme intermediate active site EP560_00780 IPR020610 Thiolase, active site EP560_00780 IPR020616 Thiolase, N-terminal EP560_00780 IPR020617 Thiolase, C-terminal EP560_00785 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal EP560_00785 IPR036291 NAD(P)-binding domain superfamily EP560_00785 IPR001753 Enoyl-CoA hydratase/isomerase EP560_00785 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site EP560_00785 IPR029045 ClpP/crotonase-like domain superfamily EP560_00785 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP560_00785 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site EP560_00785 IPR012799 Fatty oxidation complex, alpha subunit FadB EP560_00785 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding EP560_00810 IPR000305 GIY-YIG endonuclease EP560_00810 IPR035901 GIY-YIG endonuclease superfamily EP560_00810 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 EP560_00810 IPR010994 RuvA domain 2-like EP560_00810 IPR001943 UVR domain EP560_00810 IPR036876 UVR domain superfamily EP560_00810 IPR004791 UvrABC system, subunit C EP560_00810 IPR038476 UvrC homology region 2 superfamily EP560_00810 IPR001162 UvrC family homology region EP560_00820 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase EP560_00820 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial EP560_00820 IPR000462 CDP-alcohol phosphatidyltransferase EP560_00825 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain EP560_00825 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily EP560_00825 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_00825 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site EP560_00825 IPR016221 Bifunctional regulatory protein Ada EP560_00825 IPR018060 DNA binding HTH domain, AraC-type EP560_00825 IPR009057 Homeobox-like domain superfamily EP560_00825 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain EP560_00825 IPR004026 Ada DNA repair, metal-binding EP560_00825 IPR035451 Ada-like domain superfamily EP560_00825 IPR018062 HTH domain AraC-type, conserved site EP560_00825 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding EP560_00850 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA EP560_00850 IPR006143 RND efflux pump, membrane fusion protein EP560_00850 IPR039562 Membrane fusion protein, biotin-lipoyl like domain EP560_00855 IPR037027 YqgF/RNase H-like domain superfamily EP560_00855 IPR012337 Ribonuclease H-like superfamily EP560_00855 IPR006641 YqgF/RNase H-like domain EP560_00855 IPR005227 Putative pre-16S rRNA nuclease EP560_00860 IPR003774 Protein of unknown function UPF0301 EP560_00865 IPR003395 RecF/RecN/SMC, N-terminal EP560_00865 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_00865 IPR004604 DNA recombination/repair protein RecN EP560_00875 IPR014710 RmlC-like jelly roll fold EP560_00875 IPR009664 Pyrimidine/purine nucleoside phosphorylase EP560_00875 IPR011051 RmlC-like cupin domain superfamily EP560_00880 IPR029064 50S ribosomal protein L30e-like EP560_00880 IPR004441 RNA methyltransferase TrmH family EP560_00880 IPR029028 Alpha/beta knot methyltransferases EP560_00880 IPR001537 tRNA/rRNA methyltransferase, SpoU type EP560_00880 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB EP560_00880 IPR013123 RNA 2-O ribose methyltransferase, substrate binding EP560_00880 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal EP560_00890 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_00890 IPR001977 Dephospho-CoA kinase EP560_00895 IPR014032 Peptidase A24A, prepilin type IV, bacterial EP560_00895 IPR010627 Peptidase A24A, N-terminal EP560_00895 IPR000045 Prepilin type IV endopeptidase, peptidase domain EP560_00900 IPR003004 GspF/PilC family EP560_00900 IPR042094 Type II secretion system F domain superfamily EP560_00900 IPR018076 Type II secretion system F domain EP560_00900 IPR001992 Type II secretion system conserved site EP560_00905 IPR037257 General secretory system II, protein E, N-terminal superfamily EP560_00905 IPR042181 Type II secretion system, protein E, N-terminal EP560_00905 IPR013374 ATPase, type IV, pilus assembly, PilB EP560_00905 IPR001482 Type II/IV secretion system protein EP560_00905 IPR007831 General secretory system II, protein E, N-terminal EP560_00905 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_00910 IPR013785 Aldolase-type TIM barrel EP560_00910 IPR035990 Triosephosphate isomerase superfamily EP560_00910 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic EP560_00910 IPR000652 Triosephosphate isomerase EP560_00910 IPR020861 Triosephosphate isomerase, active site EP560_00915 IPR004692 Preprotein translocase SecG subunit EP560_00935 IPR035956 RimP, N-terminal domain superfamily EP560_00935 IPR028998 Ribosome maturation factor RimP, C-terminal EP560_00935 IPR003728 Ribosome maturation factor RimP EP560_00935 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily EP560_00935 IPR028989 Ribosome maturation factor RimP, N-terminal EP560_00940 IPR022967 RNA-binding domain, S1 EP560_00940 IPR003029 S1 domain EP560_00940 IPR012340 Nucleic acid-binding, OB-fold EP560_00940 IPR036555 NusA, N-terminal domain superfamily EP560_00940 IPR015946 K homology domain-like, alpha/beta EP560_00940 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical EP560_00940 IPR013735 Transcription factor NusA, N-terminal EP560_00940 IPR010214 Transcription termination factor NusA, C-terminal duplication EP560_00940 IPR010213 Transcription termination factor NusA EP560_00940 IPR030842 Transcription termination/antitermination protein NusA, bacterial EP560_00940 IPR025249 KH domain, NusA-like EP560_00940 IPR009019 K homology domain superfamily, prokaryotic type EP560_00945 IPR006847 Translation initiation factor IF-2, N-terminal EP560_00945 IPR036925 Translation initiation factor IF-2, domain 3 superfamily EP560_00945 IPR009000 Translation protein, beta-barrel domain superfamily EP560_00945 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_00945 IPR009061 Putative DNA-binding domain superfamily EP560_00945 IPR005225 Small GTP-binding protein domain EP560_00945 IPR023115 Translation initiation factor IF- 2, domain 3 EP560_00945 IPR013575 Initiation factor 2 associated domain, bacterial EP560_00945 IPR000795 Transcription factor, GTP-binding domain EP560_00945 IPR000178 Translation initiation factor aIF-2, bacterial-like EP560_00945 IPR015760 Translation initiation factor IF- 2 EP560_00950 IPR023799 Ribosome-binding factor A domain superfamily EP560_00950 IPR015946 K homology domain-like, alpha/beta EP560_00950 IPR000238 Ribosome-binding factor A EP560_00960 IPR007208 Na(+)/H(+) antiporter subunit F-like EP560_00970 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit EP560_00970 IPR004775 Na(+)/H(+) antiporter subunit D1 EP560_00975 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like EP560_00975 IPR006673 Mnh complex subunit C1 EP560_00980 IPR025383 Domain of unknown function DUF4040 EP560_00980 IPR005281 Monovalent cation:proton antiporter, subunit B EP560_00980 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal EP560_00980 IPR005663 Monovalent cation proton antiporter subunit A EP560_00980 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit EP560_00980 IPR007182 Na+/H+ antiporter MnhB subunit-related protein EP560_00995 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily EP560_00995 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain EP560_00995 IPR026660 Phosphoribosyl-AMP cyclohydrolase EP560_01000 IPR002938 FAD-binding domain EP560_01000 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_01005 IPR010232 Probable protein kinase UbiB EP560_01005 IPR004147 UbiB domain EP560_01005 IPR011009 Protein kinase-like domain superfamily EP560_01015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_01015 IPR004033 UbiE/COQ5 methyltransferase EP560_01015 IPR023576 UbiE/COQ5 methyltransferase, conserved site EP560_01025 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_01025 IPR022488 Polyphosphate kinase-2-related EP560_01035 IPR011335 Restriction endonuclease type II-like EP560_01035 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_01035 IPR041500 RecC, C-terminal EP560_01035 IPR006697 RecBCD enzyme subunit RecC EP560_01035 IPR013986 DExx box DNA helicase domain superfamily EP560_01040 IPR014017 UvrD-like DNA helicase, C-terminal EP560_01040 IPR000212 DNA helicase, UvrD/REP type EP560_01040 IPR011604 Exonuclease, phage-type/RecB, C-terminal EP560_01040 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_01040 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type EP560_01040 IPR004586 RecBCD enzyme subunit RecB EP560_01040 IPR014016 UvrD-like helicase, ATP-binding domain EP560_01040 IPR034739 UvrD/AddA helicase, N-terminal EP560_01040 IPR011335 Restriction endonuclease type II-like EP560_01045 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain EP560_01045 IPR003593 AAA+ ATPase domain EP560_01045 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_01045 IPR006344 RecBCD enzyme subunit RecD EP560_01045 IPR027785 UvrD-like helicase C-terminal domain EP560_01055 IPR005290 Ribosomal protein S15, bacterial-type EP560_01055 IPR000589 Ribosomal protein S15 EP560_01055 IPR009068 S15/NS1, RNA-binding EP560_01060 IPR015847 Exoribonuclease, phosphorolytic domain 2 EP560_01060 IPR001247 Exoribonuclease, phosphorolytic domain 1 EP560_01060 IPR004087 K Homology domain EP560_01060 IPR036345 Exoribonuclease, PH domain 2 superfamily EP560_01060 IPR036612 K Homology domain, type 1 superfamily EP560_01060 IPR003029 S1 domain EP560_01060 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_01060 IPR004088 K Homology domain, type 1 EP560_01060 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily EP560_01060 IPR022967 RNA-binding domain, S1 EP560_01060 IPR012340 Nucleic acid-binding, OB-fold EP560_01060 IPR027408 PNPase/RNase PH domain superfamily EP560_01060 IPR012162 Polyribonucleotide nucleotidyltransferase EP560_01060 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain EP560_01065 IPR004488 Magnesium/cobalt transport protein CorA EP560_01065 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB EP560_01070 IPR022835 Chaperone modulatory protein CbpM EP560_01075 IPR001623 DnaJ domain EP560_01075 IPR002939 Chaperone DnaJ, C-terminal EP560_01075 IPR023859 DNA-binding protein, curved-DNA EP560_01075 IPR008971 HSP40/DnaJ peptide-binding EP560_01075 IPR036869 Chaperone J-domain superfamily EP560_01075 IPR018253 DnaJ domain, conserved site EP560_01085 IPR000397 Heat shock protein Hsp33 EP560_01085 IPR016154 Heat shock protein Hsp33, C-terminal EP560_01085 IPR016153 Heat shock protein Hsp33, N-terminal EP560_01085 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily EP560_01090 IPR003148 Regulator of K+ conductance, N-terminal EP560_01090 IPR036291 NAD(P)-binding domain superfamily EP560_01090 IPR006153 Cation/H+ exchanger EP560_01090 IPR020884 Glutathione-regulated potassium-efflux system protein KefB EP560_01090 IPR004771 K+/H+ exchanger EP560_01090 IPR038770 Sodium/solute symporter superfamily EP560_01095 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_01095 IPR005259 Primosomal protein N' EP560_01095 IPR041222 Primosomal protein N', 3' DNA-binding domain EP560_01095 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily EP560_01095 IPR041236 Primosomal protein N, C-terminal domain EP560_01095 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain EP560_01095 IPR011545 DEAD/DEAH box helicase domain EP560_01095 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP560_01095 IPR001650 Helicase, C-terminal EP560_01100 IPR001992 Type II secretion system conserved site EP560_01100 IPR018076 Type II secretion system F domain EP560_01100 IPR042094 Type II secretion system F domain superfamily EP560_01100 IPR011850 General secretion pathway protein F EP560_01100 IPR003004 GspF/PilC family EP560_01105 IPR010054 General secretion pathway protein G EP560_01105 IPR000983 Bacterial general secretion pathway protein G-type pilin EP560_01105 IPR013545 Type II secretion system protein G EP560_01105 IPR012902 Prokaryotic N-terminal methylation site EP560_01115 IPR012340 Nucleic acid-binding, OB-fold EP560_01115 IPR008231 Probable chaperone CsaA EP560_01115 IPR002547 tRNA-binding domain EP560_01120 IPR004563 Apolipoprotein N-acyltransferase EP560_01120 IPR003010 Carbon-nitrogen hydrolase EP560_01120 IPR036526 Carbon-nitrogen hydrolase superfamily EP560_01125 IPR005170 Transporter-associated domain EP560_01125 IPR016169 FAD-binding, type PCMH, subdomain 2 EP560_01125 IPR036318 FAD-binding, type PCMH-like superfamily EP560_01125 IPR000644 CBS domain EP560_01130 IPR036868 TusA-like domain superfamily EP560_01130 IPR022931 Sulfur carrier protein TusA EP560_01130 IPR001455 TusA-like domain EP560_01135 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase EP560_01135 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_01135 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain EP560_01145 IPR018187 Asp/Glu racemase, active site 1 EP560_01145 IPR033134 Asp/Glu racemase, active site 2 EP560_01145 IPR004391 Glutamate racemase EP560_01145 IPR001920 Asp/Glu racemase EP560_01145 IPR015942 Asp/Glu/hydantoin racemase EP560_01155 IPR001015 Ferrochelatase EP560_01155 IPR019772 Ferrochelatase, active site EP560_01155 IPR033644 Ferrochelatase, C-terminal EP560_01155 IPR033659 Ferrochelatase, N-terminal EP560_01160 IPR001279 Metallo-beta-lactamase EP560_01160 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP560_01165 IPR005584 DNA gyrase inhibitor YacG EP560_01165 IPR013088 Zinc finger, NHR/GATA-type EP560_01185 IPR003691 Putative fluoride ion transporter CrcB EP560_01200 IPR002150 Ribosomal protein L31 EP560_01200 IPR042105 Ribosomal protein L31 superfamily EP560_01200 IPR027493 Ribosomal protein L31 type B EP560_01200 IPR034704 L28p-like EP560_01205 IPR011009 Protein kinase-like domain superfamily EP560_01205 IPR004147 UbiB domain EP560_01205 IPR000719 Protein kinase domain EP560_01210 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_01210 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_01210 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_01210 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain EP560_01210 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_01215 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_01215 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain EP560_01215 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_01215 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_01215 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_01215 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_01220 IPR002528 Multi antimicrobial extrusion protein EP560_01230 IPR034505 Anaerobic coproporphyrinogen-III oxidase EP560_01230 IPR023404 Radical SAM, alpha/beta horseshoe EP560_01230 IPR004559 Heme chaperone HemW-like EP560_01230 IPR010723 HemN, C-terminal EP560_01230 IPR007197 Radical SAM EP560_01230 IPR006638 Elp3/MiaB/NifB EP560_01235 IPR036291 NAD(P)-binding domain superfamily EP560_01235 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_01240 IPR000847 Transcription regulator HTH, LysR EP560_01240 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_01240 IPR005119 LysR, substrate-binding EP560_01240 IPR036390 Winged helix DNA-binding domain superfamily EP560_01250 IPR000873 AMP-dependent synthetase/ligase EP560_01250 IPR042099 AMP-dependent synthetase-like superfamily EP560_01250 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 EP560_01250 IPR025110 AMP-binding enzyme, C-terminal domain EP560_01250 IPR020845 AMP-binding, conserved site EP560_01255 IPR003029 S1 domain EP560_01255 IPR022967 RNA-binding domain, S1 EP560_01255 IPR004659 Ribonuclease E/G EP560_01255 IPR028878 Ribonuclease E EP560_01255 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G EP560_01255 IPR021968 Polyribonucleotide phosphorylase C-terminal EP560_01255 IPR012340 Nucleic acid-binding, OB-fold EP560_01265 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP560_01265 IPR002942 RNA-binding S4 domain EP560_01265 IPR006225 Pseudouridine synthase, RluC/RluD EP560_01265 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site EP560_01265 IPR036986 RNA-binding S4 domain superfamily EP560_01265 IPR006145 Pseudouridine synthase, RsuA/RluA EP560_01270 IPR023733 Pyrophosphatase PpaX EP560_01270 IPR036412 HAD-like superfamily EP560_01270 IPR006439 HAD hydrolase, subfamily IA EP560_01270 IPR041492 Haloacid dehalogenase-like hydrolase EP560_01270 IPR023214 HAD superfamily EP560_01270 IPR023198 Phosphoglycolate phosphatase-like, domain 2 EP560_01275 IPR026881 WYL domain EP560_01275 IPR036390 Winged helix DNA-binding domain superfamily EP560_01275 IPR013196 Helix-turn-helix, type 11 EP560_01275 IPR001034 DeoR-type HTH domain EP560_01275 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_01275 IPR028349 Protein PafC EP560_01280 IPR036249 Thioredoxin-like superfamily EP560_01280 IPR004045 Glutathione S-transferase, N-terminal EP560_01280 IPR040079 Glutathione Transferase family EP560_01280 IPR010987 Glutathione S-transferase, C-terminal-like EP560_01280 IPR036282 Glutathione S-transferase, C-terminal domain superfamily EP560_01290 IPR025668 Transposase DDE domain EP560_01295 IPR000847 Transcription regulator HTH, LysR EP560_01295 IPR005119 LysR, substrate-binding EP560_01295 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_01295 IPR036390 Winged helix DNA-binding domain superfamily EP560_01300 IPR001279 Metallo-beta-lactamase EP560_01300 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP560_01300 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D EP560_01305 IPR019794 Peroxidase, active site EP560_01305 IPR010255 Haem peroxidase superfamily EP560_01305 IPR000763 Catalase-peroxidase haem EP560_01305 IPR002016 Haem peroxidase EP560_01310 IPR036618 PtsI, HPr-binding domain superfamily EP560_01310 IPR003018 GAF domain EP560_01310 IPR029016 GAF-like domain superfamily EP560_01310 IPR008279 PEP-utilising enzyme, mobile domain EP560_01310 IPR018274 PEP-utilising enzyme, active site EP560_01310 IPR000121 PEP-utilising enzyme, C-terminal EP560_01310 IPR036637 Phosphohistidine domain superfamily EP560_01310 IPR006318 Phosphotransferase system, enzyme I-like EP560_01310 IPR008731 Phosphotransferase system, enzyme I N-terminal EP560_01310 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily EP560_01310 IPR023151 PEP-utilising enzyme, conserved site EP560_01310 IPR040442 Pyruvate kinase-like domain superfamily EP560_01315 IPR020084 NUDIX hydrolase, conserved site EP560_01315 IPR015797 NUDIX hydrolase-like domain superfamily EP560_01315 IPR020476 NUDIX hydrolase EP560_01315 IPR000086 NUDIX hydrolase domain EP560_01315 IPR022927 RNA pyrophosphohydrolase RppH EP560_01335 IPR036390 Winged helix DNA-binding domain superfamily EP560_01335 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_01335 IPR000847 Transcription regulator HTH, LysR EP560_01335 IPR005119 LysR, substrate-binding EP560_01345 IPR004430 3-isopropylmalate dehydratase, large subunit EP560_01345 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 EP560_01345 IPR018136 Aconitase family, 4Fe-4S cluster binding site EP560_01345 IPR033941 3-Isopropylmalate dehydratase, catalytic domain EP560_01345 IPR036008 Aconitase, iron-sulfur domain EP560_01345 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain EP560_01350 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain EP560_01350 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel EP560_01350 IPR004431 3-isopropylmalate dehydratase, small subunit EP560_01350 IPR033940 3-isopropylmalate dehydratase, swivel domain EP560_01360 IPR004429 Isopropylmalate dehydrogenase EP560_01360 IPR024084 Isopropylmalate dehydrogenase-like domain EP560_01360 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site EP560_01375 IPR004368 Translation initiation factor IF-1 EP560_01375 IPR022967 RNA-binding domain, S1 EP560_01375 IPR006196 RNA-binding domain, S1, IF1 type EP560_01375 IPR012340 Nucleic acid-binding, OB-fold EP560_01385 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain EP560_01385 IPR020095 Pseudouridine synthase I, TruA, C-terminal EP560_01385 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP560_01385 IPR001406 Pseudouridine synthase I, TruA EP560_01405 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site EP560_01405 IPR000534 Semialdehyde dehydrogenase, NAD-binding EP560_01405 IPR012280 Semialdehyde dehydrogenase, dimerisation domain EP560_01405 IPR012080 Aspartate-semialdehyde dehydrogenase EP560_01405 IPR036291 NAD(P)-binding domain superfamily EP560_01405 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type EP560_01415 IPR001991 Sodium:dicarboxylate symporter EP560_01415 IPR018107 Sodium:dicarboxylate symporter, conserved site EP560_01415 IPR036458 Sodium:dicarboxylate symporter superfamily EP560_01415 IPR033380 Glutamate-aspartate symport protein GltP/GltT EP560_01415 IPR034703 Proton/glutamate-aspartate symporter GltP EP560_01425 IPR004960 Bacterial lipid A biosynthesis acyltransferase EP560_01425 IPR011921 Lipid A biosynthesis myristoyltransferase EP560_01430 IPR001123 Amino acid exporter protein, LeuE-type EP560_01430 IPR004778 Homoserine/Threonine efflux protein EP560_01445 IPR036291 NAD(P)-binding domain superfamily EP560_01445 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 EP560_01445 IPR020843 Polyketide synthase, enoylreductase domain EP560_01445 IPR011032 GroES-like superfamily EP560_01445 IPR013149 Alcohol dehydrogenase, C-terminal EP560_01445 IPR013154 Alcohol dehydrogenase, N-terminal EP560_01445 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site EP560_01450 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_01450 IPR036390 Winged helix DNA-binding domain superfamily EP560_01450 IPR002577 Helix-turn-helix, HxlR type EP560_01460 IPR028612 DNA topoisomerase I, type IA EP560_01460 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type EP560_01460 IPR005733 DNA topoisomerase I, bacterial-type EP560_01460 IPR013498 DNA topoisomerase, type IA, zn finger EP560_01460 IPR003602 DNA topoisomerase, type IA, DNA-binding domain EP560_01460 IPR023405 DNA topoisomerase, type IA, core domain EP560_01460 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 EP560_01460 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 EP560_01460 IPR013497 DNA topoisomerase, type IA, central EP560_01460 IPR023406 DNA topoisomerase, type IA, active site EP560_01460 IPR003601 DNA topoisomerase, type IA, domain 2 EP560_01460 IPR000380 DNA topoisomerase, type IA EP560_01460 IPR034149 DNA topoisomerase 1, TOPRIM domain EP560_01460 IPR006171 TOPRIM domain EP560_01460 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 EP560_01475 IPR005751 ATP-dependent DNA helicase PcrA EP560_01475 IPR013986 DExx box DNA helicase domain superfamily EP560_01475 IPR034739 UvrD/AddA helicase, N-terminal EP560_01475 IPR014016 UvrD-like helicase, ATP-binding domain EP560_01475 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_01475 IPR000212 DNA helicase, UvrD/REP type EP560_01475 IPR014017 UvrD-like DNA helicase, C-terminal EP560_01480 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily EP560_01480 IPR035979 RNA-binding domain superfamily EP560_01480 IPR000504 RNA recognition motif domain EP560_01500 IPR038770 Sodium/solute symporter superfamily EP560_01500 IPR004771 K+/H+ exchanger EP560_01500 IPR006153 Cation/H+ exchanger EP560_01500 IPR003148 Regulator of K+ conductance, N-terminal EP560_01500 IPR036291 NAD(P)-binding domain superfamily EP560_01505 IPR038584 Ribosomal protein L33 superfamily EP560_01505 IPR001705 Ribosomal protein L33 EP560_01505 IPR018264 Ribosomal protein L33, conserved site EP560_01505 IPR011332 Zinc-binding ribosomal protein EP560_01510 IPR001383 Ribosomal protein L28 EP560_01510 IPR037147 Ribosomal protein L28/L24 superfamily EP560_01510 IPR026569 Ribosomal protein L28/L24 EP560_01510 IPR034704 L28p-like EP560_01515 IPR015590 Aldehyde dehydrogenase domain EP560_01515 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_01515 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP560_01515 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent EP560_01515 IPR016161 Aldehyde/histidinol dehydrogenase EP560_01515 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_01525 IPR036477 Formyl transferase, N-terminal domain superfamily EP560_01525 IPR002912 ACT domain EP560_01525 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain EP560_01525 IPR002376 Formyl transferase, N-terminal EP560_01525 IPR004810 Formyltetrahydrofolate deformylase EP560_01535 IPR002898 MotA/TolQ/ExbB proton channel EP560_01545 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily EP560_01545 IPR002569 Peptide methionine sulphoxide reductase MsrA EP560_01555 IPR001796 Dihydrofolate reductase domain EP560_01555 IPR017925 Dihydrofolate reductase conserved site EP560_01555 IPR024072 Dihydrofolate reductase-like domain superfamily EP560_01555 IPR012259 Dihydrofolate reductase EP560_01560 IPR020940 Thymidylate synthase, active site EP560_01560 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain EP560_01560 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily EP560_01560 IPR000398 Thymidylate synthase EP560_01575 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt EP560_01595 IPR002033 Sec-independent periplasmic protein translocase TatC EP560_01595 IPR019820 Sec-independent periplasmic protein translocase, conserved site EP560_01600 IPR018448 Twin-arginine translocation protein TatB EP560_01600 IPR003369 Sec-independent protein translocase protein TatA/B/E EP560_01605 IPR006312 Sec-independent protein translocase protein TatA/E EP560_01605 IPR003369 Sec-independent protein translocase protein TatA/B/E EP560_01615 IPR020922 dITP/XTP pyrophosphatase EP560_01615 IPR029001 Inosine triphosphate pyrophosphatase-like EP560_01615 IPR002637 Ham1-like protein EP560_01625 IPR029058 Alpha/Beta hydrolase fold EP560_01625 IPR000073 Alpha/beta hydrolase fold-1 EP560_01625 IPR008220 Homoserine/serine acetyltransferase MetX-like EP560_01625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_01625 IPR010743 Methionine biosynthesis MetW EP560_01630 IPR008220 Homoserine/serine acetyltransferase MetX-like EP560_01630 IPR000073 Alpha/beta hydrolase fold-1 EP560_01630 IPR029058 Alpha/Beta hydrolase fold EP560_01635 IPR000891 Pyruvate carboxyltransferase EP560_01635 IPR039371 LeuA, N-terminal catalytic TIM barrel domain EP560_01635 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily EP560_01635 IPR005668 2-isopropylmalate synthase EP560_01635 IPR013785 Aldolase-type TIM barrel EP560_01635 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site EP560_01635 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain EP560_01640 IPR006620 Prolyl 4-hydroxylase, alpha subunit EP560_01640 IPR005123 Oxoglutarate/iron-dependent dioxygenase EP560_01640 IPR041097 PKHD-type hydroxylase C-terminal domain EP560_01640 IPR023550 PKHD-type hydroxylase EP560_01645 IPR012910 TonB-dependent receptor, plug domain EP560_01645 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_01645 IPR039423 TonB-dependent receptor-like EP560_01645 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_01645 IPR010105 TonB-dependent siderophore receptor EP560_01645 IPR030148 Catecholate siderophore receptor Fiu EP560_01645 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP560_01650 IPR027304 Trigger factor/SurA domain superfamily EP560_01650 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain EP560_01650 IPR036611 Trigger factor ribosome-binding domain superfamily EP560_01650 IPR005215 Trigger factor EP560_01650 IPR008880 Trigger factor, C-terminal EP560_01650 IPR037041 Trigger factor, C-terminal domain superfamily EP560_01650 IPR008881 Trigger factor, ribosome-binding, bacterial EP560_01655 IPR033135 ClpP, histidine active site EP560_01655 IPR018215 ClpP, Ser active site EP560_01655 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA EP560_01655 IPR029045 ClpP/crotonase-like domain superfamily EP560_01655 IPR001907 ATP-dependent Clp protease proteolytic subunit EP560_01660 IPR003959 ATPase, AAA-type, core EP560_01660 IPR019489 Clp ATPase, C-terminal EP560_01660 IPR004487 Clp protease, ATP-binding subunit ClpX EP560_01660 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_01660 IPR010603 Zinc finger, ClpX C4-type EP560_01660 IPR038366 Zinc finger, ClpX C4-type superfamily EP560_01660 IPR003593 AAA+ ATPase domain EP560_01675 IPR020557 Fumarate lyase, conserved site EP560_01675 IPR011167 Iron-dependent fumarate hydratase EP560_01675 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily EP560_01675 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain EP560_01675 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain EP560_01680 IPR016475 Phosphate acetyltransferase, bacteria EP560_01680 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily EP560_01680 IPR010766 DRTGG EP560_01680 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_01680 IPR004614 Phosphate acetyltransferase EP560_01680 IPR002505 Phosphate acetyl/butaryl transferase EP560_01680 IPR042112 Phosphate acetyltransferase, domain 2 EP560_01680 IPR042113 Phosphate acetyltransferase, domain 1 EP560_01685 IPR004372 Acetate/propionate kinase EP560_01685 IPR023865 Aliphatic acid kinase, short-chain, conserved site EP560_01685 IPR000890 Aliphatic acid kinase, short-chain EP560_01690 IPR042096 Dihydroxy-acid dehydratase, C-terminal EP560_01690 IPR037237 IlvD/EDD, N-terminal domain EP560_01690 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site EP560_01690 IPR004786 6-phosphogluconate dehydratase EP560_01690 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase EP560_01695 IPR031338 KDPG/KHG aldolase, active site 2 EP560_01695 IPR031337 KDPG/KHG aldolase, active site 1 EP560_01695 IPR013785 Aldolase-type TIM barrel EP560_01695 IPR000887 KDPG/KHG aldolase EP560_01700 IPR003474 Gluconate transporter EP560_01705 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_01705 IPR031322 Shikimate kinase/gluconokinase EP560_01705 IPR006001 Carbohydrate kinase, thermoresistant glucokinase EP560_01710 IPR016161 Aldehyde/histidinol dehydrogenase EP560_01710 IPR015590 Aldehyde dehydrogenase domain EP560_01710 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_01710 IPR016160 Aldehyde dehydrogenase, cysteine active site EP560_01710 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_01715 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_01715 IPR000965 GPR domain EP560_01715 IPR012134 Glutamate-5-semialdehyde dehydrogenase EP560_01715 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site EP560_01715 IPR015590 Aldehyde dehydrogenase domain EP560_01715 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_01715 IPR016161 Aldehyde/histidinol dehydrogenase EP560_01720 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase EP560_01720 IPR000639 Epoxide hydrolase-like EP560_01720 IPR000073 Alpha/beta hydrolase fold-1 EP560_01720 IPR029058 Alpha/Beta hydrolase fold EP560_01730 IPR001764 Glycoside hydrolase, family 3, N-terminal EP560_01730 IPR019800 Glycoside hydrolase, family 3, active site EP560_01730 IPR022956 Beta-hexosaminidase, bacterial EP560_01730 IPR017853 Glycoside hydrolase superfamily EP560_01730 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily EP560_01735 IPR020992 Tail specific protease, C-terminal EP560_01735 IPR040573 Tail specific protease, N-terminal domain EP560_01735 IPR004447 C-terminal-processing peptidase S41A EP560_01735 IPR036034 PDZ superfamily EP560_01735 IPR001478 PDZ domain EP560_01735 IPR029045 ClpP/crotonase-like domain superfamily EP560_01735 IPR005151 Tail specific protease EP560_01740 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain EP560_01740 IPR001296 Glycosyl transferase, family 1 EP560_01745 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase EP560_01745 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily EP560_01750 IPR007479 ISC system FeS cluster assembly, IscX EP560_01750 IPR036762 IscX-like superfamily EP560_01755 IPR001564 Nucleoside diphosphate kinase EP560_01755 IPR023005 Nucleoside diphosphate kinase, active site EP560_01755 IPR036850 Nucleoside diphosphate kinase-like domain superfamily EP560_01755 IPR034907 Nucleoside diphosphate kinase-like domain EP560_01760 IPR007197 Radical SAM EP560_01760 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr EP560_01760 IPR027492 Dual-specificity RNA methyltransferase RlmN EP560_01760 IPR040072 Methyltransferase (Class A) EP560_01760 IPR013785 Aldolase-type TIM barrel EP560_01770 IPR025194 Domain of unknown function DUF4115 EP560_01770 IPR001387 Cro/C1-type helix-turn-helix domain EP560_01770 IPR010982 Lambda repressor-like, DNA-binding domain superfamily EP560_01775 IPR011005 Dihydropteroate synthase-like EP560_01775 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial EP560_01775 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type EP560_01780 IPR004154 Anticodon-binding EP560_01780 IPR036621 Anticodon-binding domain superfamily EP560_01780 IPR015807 Histidine-tRNA ligase EP560_01780 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain EP560_01780 IPR006195 Aminoacyl-tRNA synthetase, class II EP560_01780 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit EP560_01790 IPR015943 WD40/YVTN repeat-like-containing domain superfamily EP560_01790 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily EP560_01790 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat EP560_01790 IPR017687 Outer membrane protein assembly factor BamB EP560_01790 IPR002372 Pyrrolo-quinoline quinone repeat EP560_01795 IPR032859 GTPase Der, C-terminal KH-domain-like EP560_01795 IPR031166 EngA-type guanine nucleotide-binding (G) domain EP560_01795 IPR016484 GTP-binding protein EngA EP560_01795 IPR005225 Small GTP-binding protein domain EP560_01795 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_01795 IPR006073 GTP binding domain EP560_01795 IPR015946 K homology domain-like, alpha/beta EP560_01810 IPR006162 Phosphopantetheine attachment site EP560_01810 IPR009081 Phosphopantetheine binding ACP domain EP560_01810 IPR036736 ACP-like superfamily EP560_01810 IPR003231 Acyl carrier protein (ACP) EP560_01815 IPR003231 Acyl carrier protein (ACP) EP560_01815 IPR036736 ACP-like superfamily EP560_01815 IPR009081 Phosphopantetheine binding ACP domain EP560_01825 IPR000873 AMP-dependent synthetase/ligase EP560_01825 IPR020845 AMP-binding, conserved site EP560_01825 IPR025110 AMP-binding enzyme, C-terminal domain EP560_01825 IPR042099 AMP-dependent synthetase-like superfamily EP560_01840 IPR022313 Phenylalanine/histidine ammonia-lyases, active site EP560_01840 IPR008948 L-Aspartase-like EP560_01840 IPR005921 Histidine ammonia-lyase EP560_01840 IPR024083 Fumarase/histidase, N-terminal EP560_01840 IPR001106 Aromatic amino acid lyase EP560_01860 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_01860 IPR006905 Flavin-dependent halogenase EP560_01870 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 EP560_01870 IPR014030 Beta-ketoacyl synthase, N-terminal EP560_01870 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain EP560_01870 IPR016039 Thiolase-like EP560_01870 IPR000794 Beta-ketoacyl synthase EP560_01870 IPR018201 Beta-ketoacyl synthase, active site EP560_01870 IPR014031 Beta-ketoacyl synthase, C-terminal EP560_01880 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative EP560_01880 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_01880 IPR036291 NAD(P)-binding domain superfamily EP560_01885 IPR016039 Thiolase-like EP560_01885 IPR014031 Beta-ketoacyl synthase, C-terminal EP560_01885 IPR018201 Beta-ketoacyl synthase, active site EP560_01885 IPR000794 Beta-ketoacyl synthase EP560_01885 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 EP560_01885 IPR014030 Beta-ketoacyl synthase, N-terminal EP560_01885 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain EP560_01900 IPR003708 Bacterial protein export chaperone SecB EP560_01900 IPR035958 SecB-like superfamily EP560_01905 IPR014025 Glutaredoxin subgroup EP560_01905 IPR011900 Glutaredoxin, GrxC EP560_01905 IPR036249 Thioredoxin-like superfamily EP560_01905 IPR011767 Glutaredoxin active site EP560_01905 IPR002109 Glutaredoxin EP560_01915 IPR012340 Nucleic acid-binding, OB-fold EP560_01915 IPR004881 Ribosome biogenesis GTPase RsgA EP560_01915 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_01915 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain EP560_01915 IPR010914 RsgA GTPase domain EP560_01920 IPR022894 Oligoribonuclease EP560_01920 IPR012337 Ribonuclease H-like superfamily EP560_01920 IPR013520 Exonuclease, RNase T/DNA polymerase III EP560_01920 IPR036397 Ribonuclease H superfamily EP560_01930 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_01930 IPR036291 NAD(P)-binding domain superfamily EP560_01930 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) EP560_01935 IPR010131 RND efflux system, outer membrane lipoprotein, NodT EP560_01935 IPR003423 Outer membrane efflux protein EP560_01940 IPR017871 ABC transporter, conserved site EP560_01940 IPR025857 MacB-like periplasmic core domain EP560_01940 IPR003593 AAA+ ATPase domain EP560_01940 IPR003838 ABC transporter permease protein domain EP560_01940 IPR017911 ABC transporter, macrolide export, ATP-binding domain EP560_01940 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_01940 IPR003439 ABC transporter-like EP560_01945 IPR030190 Macrolide export protein MacA EP560_01945 IPR006143 RND efflux pump, membrane fusion protein EP560_01945 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain EP560_01960 IPR002302 Leucine-tRNA ligase EP560_01960 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding EP560_01960 IPR025709 Leucyl-tRNA synthetase, editing domain EP560_01960 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding EP560_01960 IPR002300 Aminoacyl-tRNA synthetase, class Ia EP560_01960 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site EP560_01960 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain EP560_01960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_01960 IPR015413 Methionyl/Leucyl tRNA synthetase EP560_01970 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain EP560_01970 IPR039368 Acetolactate synthase large subunit, TPP binding domain EP560_01970 IPR012846 Acetolactate synthase, large subunit, biosynthetic EP560_01970 IPR012000 Thiamine pyrophosphate enzyme, central domain EP560_01970 IPR029061 Thiamin diphosphate-binding fold EP560_01970 IPR029035 DHS-like NAD/FAD-binding domain superfamily EP560_01970 IPR000399 TPP-binding enzyme, conserved site EP560_01970 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding EP560_01975 IPR019455 Acetolactate synthase, small subunit, C-terminal EP560_01975 IPR004789 Acetolactate synthase, small subunit EP560_01975 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal EP560_01975 IPR002912 ACT domain EP560_01975 IPR039557 AHAS, ACT domain EP560_01980 IPR036291 NAD(P)-binding domain superfamily EP560_01980 IPR014359 Ketol-acid reductoisomerase, prokaryotic EP560_01980 IPR013116 Ketol-acid reductoisomerase, N-terminal EP560_01980 IPR000506 Ketol-acid reductoisomerase, C-terminal EP560_01980 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP560_01980 IPR013023 Ketol-acid reductoisomerase EP560_01985 IPR035919 EAL domain superfamily EP560_01985 IPR005330 MHYT domain EP560_01985 IPR029787 Nucleotide cyclase EP560_01985 IPR001633 EAL domain EP560_01985 IPR000160 GGDEF domain EP560_02010 IPR000795 Transcription factor, GTP-binding domain EP560_02010 IPR005225 Small GTP-binding protein domain EP560_02010 IPR004548 Peptide chain release factor 3 EP560_02010 IPR041732 Peptide chain release factor 3, GTP-binding domain EP560_02010 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily EP560_02010 IPR032090 Peptide chain release factor 3, C-terminal EP560_02010 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_02010 IPR031157 Tr-type G domain, conserved site EP560_02010 IPR004161 Translation elongation factor EFTu-like, domain 2 EP560_02010 IPR035647 EF-G domain III/V-like EP560_02010 IPR009000 Translation protein, beta-barrel domain superfamily EP560_02025 IPR032466 Metal-dependent hydrolase EP560_02025 IPR001130 TatD family EP560_02025 IPR015991 Uncharacterised hydrolase TatD-type EP560_02025 IPR018228 Deoxyribonuclease, TatD-related, conserved site EP560_02030 IPR006249 Aconitase/Iron-responsive element-binding protein 2 EP560_02030 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 EP560_02030 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain EP560_02030 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel EP560_02030 IPR036008 Aconitase, iron-sulfur domain EP560_02030 IPR018136 Aconitase family, 4Fe-4S cluster binding site EP560_02030 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain EP560_02040 IPR035985 Ubiquitin-activating enzyme EP560_02040 IPR000594 THIF-type NAD/FAD binding fold EP560_02050 IPR005119 LysR, substrate-binding EP560_02050 IPR036390 Winged helix DNA-binding domain superfamily EP560_02050 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain EP560_02050 IPR000847 Transcription regulator HTH, LysR EP560_02050 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_02060 IPR013785 Aldolase-type TIM barrel EP560_02060 IPR018517 tRNA-dihydrouridine synthase, conserved site EP560_02060 IPR035587 DUS-like, FMN-binding domain EP560_02060 IPR001269 tRNA-dihydrouridine synthase EP560_02060 IPR004653 tRNA-dihydrouridine(20/20a) synthase EP560_02065 IPR036259 MFS transporter superfamily EP560_02065 IPR020846 Major facilitator superfamily domain EP560_02065 IPR011701 Major facilitator superfamily EP560_02090 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 EP560_02090 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal EP560_02090 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain EP560_02090 IPR036291 NAD(P)-binding domain superfamily EP560_02090 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 EP560_02095 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal EP560_02100 IPR034300 NADP transhydrogenase beta-like domain EP560_02100 IPR012136 NADP transhydrogenase, beta subunit EP560_02100 IPR029035 DHS-like NAD/FAD-binding domain superfamily EP560_02105 IPR036291 NAD(P)-binding domain superfamily EP560_02105 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_02105 IPR005979 Light-dependent protochlorophyllide reductase EP560_02110 IPR004394 Protein Iojap/ribosomal silencing factor RsfS EP560_02115 IPR013022 Xylose isomerase-like, TIM barrel domain EP560_02115 IPR036237 Xylose isomerase-like superfamily EP560_02115 IPR026040 Hydroxypyruvate isomerase-like EP560_02120 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding EP560_02120 IPR036291 NAD(P)-binding domain superfamily EP560_02120 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site EP560_02120 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP560_02120 IPR013328 6-phosphogluconate dehydrogenase, domain 2 EP560_02120 IPR015815 3-hydroxyisobutyrate dehydrogenase-related EP560_02120 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain EP560_02125 IPR001753 Enoyl-CoA hydratase/isomerase EP560_02125 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site EP560_02125 IPR029045 ClpP/crotonase-like domain superfamily EP560_02130 IPR003660 HAMP domain EP560_02130 IPR011006 CheY-like superfamily EP560_02130 IPR005467 Histidine kinase domain EP560_02130 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP560_02130 IPR001789 Signal transduction response regulator, receiver domain EP560_02130 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain EP560_02130 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP560_02130 IPR019247 Histidine kinase BarA, N-terminal EP560_02130 IPR036641 HPT domain superfamily EP560_02130 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP560_02130 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_02130 IPR003594 Histidine kinase/HSP90-like ATPase EP560_02135 IPR005858 Cysteine synthase CysM EP560_02135 IPR005856 Cysteine synthase EP560_02135 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP560_02135 IPR001926 Pyridoxal-phosphate dependent enzyme EP560_02135 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site EP560_02145 IPR012340 Nucleic acid-binding, OB-fold EP560_02145 IPR030390 RNA methyltransferase TrmA, active site EP560_02145 IPR002792 TRAM domain EP560_02145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_02145 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD EP560_02145 IPR010280 (Uracil-5)-methyltransferase family EP560_02150 IPR012675 Beta-grasp domain superfamily EP560_02150 IPR002912 ACT domain EP560_02150 IPR003607 HD/PDEase domain EP560_02150 IPR004811 RelA/SpoT family EP560_02150 IPR007685 RelA/SpoT EP560_02150 IPR004095 TGS EP560_02150 IPR033655 RelA, TGS domain EP560_02150 IPR012676 TGS-like EP560_02155 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_02155 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_02155 IPR036291 NAD(P)-binding domain superfamily EP560_02160 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core EP560_02160 IPR011551 NTP pyrophosphohydrolase MazG EP560_02165 IPR010994 RuvA domain 2-like EP560_02165 IPR004509 Competence protein ComEA, helix-hairpin-helix domain EP560_02170 IPR025866 Polymerase A arginine-rich C-terminal domain EP560_02170 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain EP560_02170 IPR010206 Poly(A) polymerase I EP560_02170 IPR002646 Poly A polymerase, head domain EP560_02175 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily EP560_02175 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK EP560_02180 IPR003700 Ketopantoate hydroxymethyltransferase EP560_02180 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily EP560_02180 IPR040442 Pyruvate kinase-like domain superfamily EP560_02185 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain EP560_02185 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_02185 IPR004821 Cytidyltransferase-like domain EP560_02185 IPR003721 Pantoate-beta-alanine ligase EP560_02190 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_02190 IPR005337 RapZ-like family EP560_02195 IPR035895 HPr-like superfamily EP560_02195 IPR002114 Phosphotransferase system, HPr serine phosphorylation site EP560_02195 IPR000032 Phosphocarrier protein HPr-like EP560_02195 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site EP560_02200 IPR023153 PSPTO4464-like domain superfamily EP560_02200 IPR006839 Ribosome-associated, YjgA EP560_02205 IPR042099 AMP-dependent synthetase-like superfamily EP560_02205 IPR025110 AMP-binding enzyme, C-terminal domain EP560_02205 IPR020845 AMP-binding, conserved site EP560_02205 IPR000873 AMP-dependent synthetase/ligase EP560_02210 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) EP560_02210 IPR004154 Anticodon-binding EP560_02210 IPR006195 Aminoacyl-tRNA synthetase, class II EP560_02210 IPR004095 TGS EP560_02210 IPR012676 TGS-like EP560_02210 IPR002320 Threonine-tRNA ligase, class IIa EP560_02210 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily EP560_02210 IPR033728 Threonine-tRNA ligase catalytic core domain EP560_02210 IPR012947 Threonyl/alanyl tRNA synthetase, SAD EP560_02210 IPR036621 Anticodon-binding domain superfamily EP560_02210 IPR012675 Beta-grasp domain superfamily EP560_02215 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily EP560_02215 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily EP560_02215 IPR001288 Translation initiation factor 3 EP560_02215 IPR019815 Translation initiation factor 3, C-terminal EP560_02215 IPR019814 Translation initiation factor 3, N-terminal EP560_02225 IPR004045 Glutathione S-transferase, N-terminal EP560_02225 IPR036282 Glutathione S-transferase, C-terminal domain superfamily EP560_02225 IPR036249 Thioredoxin-like superfamily EP560_02225 IPR010987 Glutathione S-transferase, C-terminal-like EP560_02225 IPR004046 Glutathione S-transferase, C-terminal EP560_02230 IPR032816 SNARE associated Golgi protein EP560_02235 IPR036259 MFS transporter superfamily EP560_02235 IPR020846 Major facilitator superfamily domain EP560_02235 IPR011701 Major facilitator superfamily EP560_02235 IPR004751 Drug antiporter protein EP560_02240 IPR021137 Ribosomal protein L35 EP560_02240 IPR037229 Ribosomal protein L35 superfamily EP560_02240 IPR018265 Ribosomal protein L35, conserved site EP560_02240 IPR001706 Ribosomal protein L35, non-mitochondrial EP560_02245 IPR005813 Ribosomal protein L20 EP560_02245 IPR035566 Ribosomal protein L20, C-terminal EP560_02265 IPR006195 Aminoacyl-tRNA synthetase, class II EP560_02265 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit EP560_02265 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm EP560_02265 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial EP560_02265 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal EP560_02265 IPR002319 Phenylalanyl-tRNA synthetase EP560_02270 IPR009061 Putative DNA-binding domain superfamily EP560_02270 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain EP560_02270 IPR002547 tRNA-binding domain EP560_02270 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain EP560_02270 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 EP560_02270 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit EP560_02270 IPR005146 B3/B4 tRNA-binding domain EP560_02270 IPR005147 tRNA synthetase, B5-domain EP560_02270 IPR012340 Nucleic acid-binding, OB-fold EP560_02270 IPR005121 Ferrodoxin-fold anticodon-binding domain EP560_02270 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily EP560_02275 IPR005684 Integration host factor, alpha subunit EP560_02275 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily EP560_02275 IPR020816 Histone-like DNA-binding protein, conserved site EP560_02275 IPR000119 Histone-like DNA-binding protein EP560_02290 IPR011113 Rho termination factor, RNA-binding domain EP560_02290 IPR011112 Rho termination factor, N-terminal EP560_02290 IPR041703 Transcription termination factor Rho, ATP binding domain EP560_02290 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_02290 IPR011129 Cold shock domain EP560_02290 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain EP560_02290 IPR003593 AAA+ ATPase domain EP560_02290 IPR004665 Transcription termination factor Rho EP560_02290 IPR036269 Rho termination factor, N-terminal domain superfamily EP560_02290 IPR012340 Nucleic acid-binding, OB-fold EP560_02295 IPR017937 Thioredoxin, conserved site EP560_02295 IPR013766 Thioredoxin domain EP560_02295 IPR036249 Thioredoxin-like superfamily EP560_02295 IPR005746 Thioredoxin EP560_02300 IPR022371 Exopolyphosphatase EP560_02300 IPR003695 Ppx/GppA phosphatase EP560_02300 IPR030673 Pyrophosphatase, GppA/Ppx-type EP560_02305 IPR001095 Acetyl-CoA carboxylase, alpha subunit EP560_02305 IPR029045 ClpP/crotonase-like domain superfamily EP560_02305 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal EP560_02310 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_02310 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain EP560_02310 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal EP560_02310 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal EP560_02310 IPR012094 tRNA(Ile)-lysidine synthase EP560_02310 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal EP560_02315 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain EP560_02315 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal EP560_02315 IPR000304 Pyrroline-5-carboxylate reductase EP560_02315 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP560_02315 IPR036291 NAD(P)-binding domain superfamily EP560_02320 IPR003425 CCB3/YggT EP560_02325 IPR002562 3'-5' exonuclease domain EP560_02325 IPR002421 5'-3' exonuclease, N-terminal EP560_02325 IPR036279 5'-3' exonuclease, C-terminal domain superfamily EP560_02325 IPR036397 Ribonuclease H superfamily EP560_02325 IPR012337 Ribonuclease H-like superfamily EP560_02325 IPR029060 PIN-like domain superfamily EP560_02325 IPR008918 Helix-hairpin-helix motif, class 2 EP560_02325 IPR019760 DNA-directed DNA polymerase, family A, conserved site EP560_02325 IPR001098 DNA-directed DNA polymerase, family A, palm domain EP560_02325 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal EP560_02325 IPR002298 DNA polymerase A EP560_02325 IPR018320 DNA polymerase 1 EP560_02325 IPR020045 DNA polymerase I-like, H3TH domain EP560_02345 IPR042181 Type II secretion system, protein E, N-terminal EP560_02345 IPR001482 Type II/IV secretion system protein EP560_02345 IPR037257 General secretory system II, protein E, N-terminal superfamily EP560_02345 IPR013369 Type II secretion system GspE EP560_02345 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_02350 IPR019953 Organic hydroperoxide resistance protein famiy EP560_02350 IPR036102 OsmC/Ohr superfamily EP560_02350 IPR003718 OsmC/Ohr family EP560_02350 IPR015946 K homology domain-like, alpha/beta EP560_02355 IPR036390 Winged helix DNA-binding domain superfamily EP560_02355 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_02355 IPR000835 MarR-type HTH domain EP560_02365 IPR003010 Carbon-nitrogen hydrolase EP560_02365 IPR001110 Uncharacterised protein family UPF0012, conserved site EP560_02365 IPR036526 Carbon-nitrogen hydrolase superfamily EP560_02410 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily EP560_02410 IPR007046 RNA polymerase sigma factor 54, core-binding domain EP560_02410 IPR007634 RNA polymerase sigma factor 54, DNA-binding EP560_02410 IPR000394 RNA polymerase sigma factor 54 EP560_02415 IPR003489 Ribosome hibernation promoting factor/RaiA EP560_02415 IPR036567 Ribosome hibernation promotion factor-like EP560_02420 IPR036065 BolA-like superfamily EP560_02420 IPR002634 BolA protein EP560_02425 IPR002110 Ankyrin repeat EP560_02425 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta EP560_02425 IPR036968 Enolpyruvate transferase domain superfamily EP560_02425 IPR020683 Ankyrin repeat-containing domain EP560_02425 IPR001986 Enolpyruvate transferase domain EP560_02425 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase EP560_02430 IPR001348 ATP phosphoribosyltransferase HisG EP560_02430 IPR024893 ATP phosphoribosyltransferase HisG, short form EP560_02430 IPR013820 ATP phosphoribosyltransferase, catalytic domain EP560_02430 IPR018198 ATP phosphoribosyltransferase, conserved site EP560_02435 IPR012131 Histidinol dehydrogenase EP560_02435 IPR016161 Aldehyde/histidinol dehydrogenase EP560_02435 IPR001692 Histidinol dehydrogenase, conserved site EP560_02435 IPR022695 Histidinol dehydrogenase, monofunctional EP560_02440 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_02440 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_02440 IPR004839 Aminotransferase, class I/classII EP560_02440 IPR005861 Histidinol-phosphate aminotransferase family EP560_02440 IPR015424 Pyridoxal phosphate-dependent transferase EP560_02445 IPR005802 Aminodeoxychorismate synthase, component I EP560_02445 IPR005801 ADC synthase EP560_02445 IPR019999 Anthranilate synthase component I-like EP560_02445 IPR006805 Anthranilate synthase component I, N-terminal EP560_02445 IPR015890 Chorismate-utilising enzyme, C-terminal EP560_02465 IPR039552 Transposase IS66, C-terminal EP560_02465 IPR004291 Transposase, IS66 EP560_02465 IPR024463 Transposase TnpC, homeodomain EP560_02465 IPR024474 Zinc-finger binding domain of transposase IS66 EP560_02500 IPR000059 NUDIX hydrolase, NudL, conserved site EP560_02500 IPR015797 NUDIX hydrolase-like domain superfamily EP560_02500 IPR023735 Uncharacterised nudix hydrolase NudL EP560_02500 IPR000086 NUDIX hydrolase domain EP560_02505 IPR011004 Trimeric LpxA-like superfamily EP560_02505 IPR001451 Hexapeptide repeat EP560_02510 IPR000905 Gcp-like domain EP560_02510 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB EP560_02515 IPR007536 Ribosomal RNA small subunit methyltransferase J EP560_02515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_02525 IPR029058 Alpha/Beta hydrolase fold EP560_02525 IPR014186 S-formylglutathione hydrolase EP560_02525 IPR000801 Putative esterase EP560_02535 IPR013785 Aldolase-type TIM barrel EP560_02535 IPR000056 Ribulose-phosphate 3-epimerase-like EP560_02535 IPR026019 Ribulose-phosphate 3-epimerase EP560_02535 IPR011060 Ribulose-phosphate binding barrel EP560_02540 IPR006379 HAD-superfamily hydrolase, subfamily IIB EP560_02540 IPR023214 HAD superfamily EP560_02540 IPR000150 Cof family EP560_02540 IPR036412 HAD-like superfamily EP560_02550 IPR008972 Cupredoxin EP560_02550 IPR034284 Copper resistance protein, first cupredoxin domain EP560_02550 IPR034282 Copper resistance protein CopA, second cupredoxin domain EP560_02550 IPR034279 Copper resistance protein, third cupredoxin domain EP560_02550 IPR006311 Twin-arginine translocation pathway, signal sequence EP560_02550 IPR011707 Multicopper oxidase, type 3 EP560_02550 IPR033138 Multicopper oxidases, conserved site EP560_02550 IPR006376 Copper-resistance protein CopA EP560_02550 IPR002355 Multicopper oxidase, copper-binding site EP560_02550 IPR011706 Multicopper oxidase, type 2 EP560_02550 IPR001117 Multicopper oxidase, type 1 EP560_02550 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal EP560_02555 IPR007939 Copper resistance B precursor EP560_02565 IPR000390 Small multidrug resistance protein family EP560_02570 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain EP560_02570 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding EP560_02570 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site EP560_02570 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain EP560_02570 IPR023546 Methylated-DNA--protein-cysteine methyltransferase EP560_02570 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily EP560_02570 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_02575 IPR002813 Arginine biosynthesis protein ArgJ EP560_02575 IPR016117 ArgJ-like domain superfamily EP560_02575 IPR042195 ArgJ beta chain, C-terminal domain EP560_02580 IPR023513 Quinolinate synthase A, type 1 EP560_02580 IPR036094 Quinolinate synthetase A superfamily EP560_02580 IPR003473 Quinolinate synthetase A EP560_02605 IPR032466 Metal-dependent hydrolase EP560_02605 IPR006330 Adenosine/adenine deaminase EP560_02605 IPR028893 Adenosine deaminase EP560_02605 IPR001365 Adenosine/AMP deaminase domain EP560_02605 IPR006650 Adenosine/AMP deaminase active site EP560_02610 IPR011032 GroES-like superfamily EP560_02610 IPR020843 Polyketide synthase, enoylreductase domain EP560_02610 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site EP560_02610 IPR036291 NAD(P)-binding domain superfamily EP560_02610 IPR013149 Alcohol dehydrogenase, C-terminal EP560_02610 IPR013154 Alcohol dehydrogenase, N-terminal EP560_02615 IPR000847 Transcription regulator HTH, LysR EP560_02615 IPR036390 Winged helix DNA-binding domain superfamily EP560_02615 IPR005119 LysR, substrate-binding EP560_02615 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_02620 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_02620 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_02620 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_02620 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_02620 IPR006089 Acyl-CoA dehydrogenase, conserved site EP560_02620 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_02620 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_02625 IPR011701 Major facilitator superfamily EP560_02625 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family EP560_02625 IPR020846 Major facilitator superfamily domain EP560_02625 IPR036259 MFS transporter superfamily EP560_02625 IPR005829 Sugar transporter, conserved site EP560_02630 IPR023606 CoA-transferase family III domain superfamily EP560_02630 IPR003673 CoA-transferase family III EP560_02635 IPR012830 Citrate utilization protein B EP560_02635 IPR036197 NarG-like superfamily EP560_02640 IPR011031 Multihaem cytochrome EP560_02640 IPR036280 Multiheme cytochrome superfamily EP560_02640 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily EP560_02640 IPR010960 Flavocytochrome c EP560_02640 IPR012286 Tetrahaem cytochrome domain EP560_02640 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain EP560_02640 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_02645 IPR005119 LysR, substrate-binding EP560_02645 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_02645 IPR036390 Winged helix DNA-binding domain superfamily EP560_02645 IPR000847 Transcription regulator HTH, LysR EP560_02655 IPR005829 Sugar transporter, conserved site EP560_02655 IPR004736 MFS transporter, metabolite:H symporter EP560_02655 IPR011701 Major facilitator superfamily EP560_02655 IPR020846 Major facilitator superfamily domain EP560_02655 IPR036259 MFS transporter superfamily EP560_02665 IPR005119 LysR, substrate-binding EP560_02665 IPR000847 Transcription regulator HTH, LysR EP560_02665 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_02665 IPR036390 Winged helix DNA-binding domain superfamily EP560_02675 IPR023905 Acetyldiaminopimelate deacetylase EP560_02675 IPR017439 Amidohydrolase EP560_02675 IPR002933 Peptidase M20 EP560_02675 IPR011650 Peptidase M20, dimerisation domain EP560_02675 IPR036264 Bacterial exopeptidase dimerisation domain EP560_02680 IPR020449 Transcription regulator HTH, AraC- type EP560_02680 IPR018060 DNA binding HTH domain, AraC-type EP560_02680 IPR009057 Homeobox-like domain superfamily EP560_02680 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal EP560_02690 IPR001123 Amino acid exporter protein, LeuE-type EP560_02695 IPR036390 Winged helix DNA-binding domain superfamily EP560_02695 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_02695 IPR000847 Transcription regulator HTH, LysR EP560_02695 IPR005119 LysR, substrate-binding EP560_02705 IPR038071 UROD/MetE-like superfamily EP560_02705 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal EP560_02705 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal EP560_02705 IPR006276 Cobalamin-independent methionine synthase EP560_02710 IPR012349 FMN-binding split barrel EP560_02710 IPR019917 FMN reductase (NADH) RutF EP560_02710 IPR002563 Flavin reductase like domain EP560_02730 IPR036397 Ribonuclease H superfamily EP560_02730 IPR012337 Ribonuclease H-like superfamily EP560_02730 IPR001598 Transposase, IS30, conserved site EP560_02730 IPR025246 Transposase IS30-like HTH domain EP560_02730 IPR001584 Integrase, catalytic core EP560_02745 IPR003719 Phenazine biosynthesis PhzF protein EP560_02765 IPR017511 PQQ-dependent membrane bound dehydrogenase EP560_02765 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat EP560_02765 IPR002372 Pyrrolo-quinoline quinone repeat EP560_02765 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily EP560_02765 IPR001479 Quinoprotein dehydrogenase, conserved site EP560_02835 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_02835 IPR003594 Histidine kinase/HSP90-like ATPase EP560_02835 IPR025908 Sensor N-terminal transmembrane domain EP560_02835 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP560_02835 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP560_02835 IPR005467 Histidine kinase domain EP560_02835 IPR003660 HAMP domain EP560_02835 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP560_02835 IPR025919 Stimulus-sensing domain EP560_02845 IPR012348 Ribonucleotide reductase-like EP560_02845 IPR000358 Ribonucleotide reductase small subunit family EP560_02845 IPR033909 Ribonucleotide reductase small subunit EP560_02845 IPR009078 Ferritin-like superfamily EP560_02855 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal EP560_02855 IPR039718 Ribonucleoside-diphosphate reductase large subunit EP560_02855 IPR005144 ATP-cone domain EP560_02855 IPR013509 Ribonucleotide reductase large subunit, N-terminal EP560_02855 IPR000788 Ribonucleotide reductase large subunit, C-terminal EP560_02855 IPR013346 Ribonucleotide reductase, class I , alpha subunit EP560_02865 IPR001789 Signal transduction response regulator, receiver domain EP560_02865 IPR016032 Signal transduction response regulator, C-terminal effector EP560_02865 IPR039420 Transcriptional regulatory protein WalR-like EP560_02865 IPR001867 OmpR/PhoB-type DNA-binding domain EP560_02865 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_02865 IPR011006 CheY-like superfamily EP560_02870 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_02870 IPR003660 HAMP domain EP560_02870 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP560_02870 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP560_02870 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP560_02870 IPR005467 Histidine kinase domain EP560_02870 IPR003594 Histidine kinase/HSP90-like ATPase EP560_02880 IPR029787 Nucleotide cyclase EP560_02880 IPR000160 GGDEF domain EP560_02880 IPR033416 Periplasmic sensor domain CHASE7 EP560_02885 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily EP560_02885 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 EP560_02885 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid EP560_02890 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit EP560_02890 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit EP560_02895 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily EP560_02895 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H EP560_02895 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site EP560_02895 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site EP560_02895 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit EP560_02895 IPR001135 NADH-quinone oxidoreductase, subunit D EP560_02895 IPR023062 NADH dehydrogenase, subunit CD EP560_02895 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily EP560_02895 IPR010218 NADH dehydrogenase, subunit C EP560_02895 IPR029014 [NiFe]-hydrogenase, large subunit EP560_02900 IPR002023 NADH-quinone oxidoreductase subunit E-like EP560_02900 IPR036249 Thioredoxin-like superfamily EP560_02900 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal EP560_02900 IPR042128 NuoE domain EP560_02905 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily EP560_02905 IPR019554 Soluble ligand binding domain EP560_02905 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily EP560_02905 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain EP560_02905 IPR011537 NADH ubiquinone oxidoreductase, F subunit EP560_02905 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site EP560_02905 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain EP560_02910 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP560_02910 IPR036010 2Fe-2S ferredoxin-like superfamily EP560_02910 IPR009010 Aspartate decarboxylase-like domain superfamily EP560_02910 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain EP560_02910 IPR010228 NADH:ubiquinone oxidoreductase, subunit G EP560_02910 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding EP560_02910 IPR006656 Molybdopterin oxidoreductase EP560_02910 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site EP560_02915 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site EP560_02915 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H EP560_02920 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain EP560_02920 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site EP560_02920 IPR010226 NADH-quinone oxidoreductase, chain I EP560_02925 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 EP560_02925 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ EP560_02930 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like EP560_02930 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K EP560_02935 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal EP560_02935 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit EP560_02935 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup EP560_02935 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 EP560_02940 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit EP560_02940 IPR010227 NADH-quinone oxidoreductase, chain M/4 EP560_02940 IPR003918 NADH:ubiquinone oxidoreductase EP560_02945 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit EP560_02945 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 EP560_02950 IPR005765 Uracil phosphoribosyl transferase EP560_02950 IPR029057 Phosphoribosyltransferase-like EP560_02950 IPR000836 Phosphoribosyltransferase domain EP560_02950 IPR034332 Uracil phosphoribosyltransferase, bacterial-type EP560_02955 IPR011129 Cold shock domain EP560_02955 IPR012156 Cold shock, CspA EP560_02955 IPR019844 Cold-shock (CSD) domain EP560_02955 IPR002059 Cold-shock protein, DNA-binding EP560_02955 IPR012340 Nucleic acid-binding, OB-fold EP560_02960 IPR000847 Transcription regulator HTH, LysR EP560_02960 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_02960 IPR005119 LysR, substrate-binding EP560_02960 IPR036390 Winged helix DNA-binding domain superfamily EP560_02965 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain EP560_02965 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP560_02965 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP560_02965 IPR033892 Ferredoxin--NADP reductase, bacteria EP560_02965 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase EP560_02965 IPR017927 FAD-binding domain, ferredoxin reductase-type EP560_02965 IPR017938 Riboflavin synthase-like beta-barrel EP560_02980 IPR008910 Conserved TM helix EP560_02990 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like EP560_02990 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_02990 IPR023166 HI0933-like insert domain superfamily EP560_02995 IPR001926 Pyridoxal-phosphate dependent enzyme EP560_02995 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase EP560_02995 IPR005966 D-cysteine desulfhydrase EP560_02995 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP560_03000 IPR039562 Membrane fusion protein, biotin-lipoyl like domain EP560_03025 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site EP560_03025 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain EP560_03025 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal EP560_03025 IPR023458 Methionine-tRNA ligase, type 1 EP560_03025 IPR014758 Methionyl-tRNA synthetase EP560_03025 IPR015413 Methionyl/Leucyl tRNA synthetase EP560_03025 IPR033911 Methioninyl-tRNA synthetase core domain EP560_03025 IPR029038 Methionyl-tRNA synthetase, Zn-domain EP560_03025 IPR012340 Nucleic acid-binding, OB-fold EP560_03025 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_03025 IPR002547 tRNA-binding domain EP560_03025 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding EP560_03035 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 EP560_03035 IPR034904 Fe-S cluster assembly domain superfamily EP560_03035 IPR019591 Mrp/NBP35 ATP-binding protein EP560_03035 IPR000808 Mrp, conserved site EP560_03035 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_03045 IPR000845 Nucleoside phosphorylase domain EP560_03045 IPR010049 MTA/SAH nucleosidase EP560_03045 IPR035994 Nucleoside phosphorylase superfamily EP560_03060 IPR011962 dCTP deaminase EP560_03060 IPR029054 dUTPase-like EP560_03060 IPR036157 dUTPase-like superfamily EP560_03060 IPR033704 dUTPase, trimeric EP560_03095 IPR035587 DUS-like, FMN-binding domain EP560_03095 IPR032886 tRNA-dihydrouridine(16) synthase EP560_03095 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal EP560_03095 IPR018517 tRNA-dihydrouridine synthase, conserved site EP560_03095 IPR001269 tRNA-dihydrouridine synthase EP560_03095 IPR013785 Aldolase-type TIM barrel EP560_03105 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily EP560_03105 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain EP560_03105 IPR022941 Signal recognition particle, SRP54 subunit EP560_03105 IPR004780 Signal recognition particle protein EP560_03105 IPR004125 Signal recognition particle, SRP54 subunit, M-domain EP560_03105 IPR013822 Signal recognition particle SRP54, helical bundle EP560_03105 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily EP560_03105 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_03105 IPR003593 AAA+ ATPase domain EP560_03110 IPR004619 Type III pantothenate kinase EP560_03120 IPR002781 Transmembrane protein TauE-like EP560_03130 IPR024704 Structural maintenance of chromosomes protein EP560_03130 IPR010935 SMCs flexible hinge EP560_03130 IPR036277 SMCs flexible hinge superfamily EP560_03130 IPR011890 Structural maintenance of chromosomes protein, prokaryotic EP560_03130 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_03130 IPR003395 RecF/RecN/SMC, N-terminal EP560_03140 IPR018239 NAD-dependent DNA ligase, active site EP560_03140 IPR004150 NAD-dependent DNA ligase, OB-fold EP560_03140 IPR012340 Nucleic acid-binding, OB-fold EP560_03140 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 EP560_03140 IPR013840 NAD-dependent DNA ligase, N-terminal EP560_03140 IPR013839 NAD-dependent DNA ligase, adenylation EP560_03140 IPR001357 BRCT domain EP560_03140 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type EP560_03140 IPR001679 NAD-dependent DNA ligase EP560_03140 IPR033136 NAD-dependent DNA ligase, conserved site EP560_03140 IPR036420 BRCT domain superfamily EP560_03140 IPR041663 DisA/LigA, helix-hairpin-helix motif EP560_03140 IPR010994 RuvA domain 2-like EP560_03145 IPR002024 Bacterioferritin EP560_03145 IPR009040 Ferritin-like diiron domain EP560_03145 IPR009078 Ferritin-like superfamily EP560_03145 IPR008331 Ferritin/DPS protein domain EP560_03145 IPR012347 Ferritin-like EP560_03150 IPR020846 Major facilitator superfamily domain EP560_03150 IPR036259 MFS transporter superfamily EP560_03150 IPR011701 Major facilitator superfamily EP560_03155 IPR012766 Alpha,alpha-trehalose-phosphate synthase EP560_03155 IPR001830 Glycosyl transferase, family 20 EP560_03160 IPR036412 HAD-like superfamily EP560_03160 IPR003337 Trehalose-phosphatase EP560_03160 IPR023214 HAD superfamily EP560_03160 IPR006379 HAD-superfamily hydrolase, subfamily IIB EP560_03165 IPR029058 Alpha/Beta hydrolase fold EP560_03165 IPR000073 Alpha/beta hydrolase fold-1 EP560_03165 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC EP560_03165 IPR013216 Methyltransferase type 11 EP560_03165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_03170 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA EP560_03170 IPR010722 Biotin and thiamin synthesis-associated domain EP560_03170 IPR005814 Aminotransferase class-III EP560_03170 IPR015424 Pyridoxal phosphate-dependent transferase EP560_03170 IPR013785 Aldolase-type TIM barrel EP560_03170 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_03170 IPR007197 Radical SAM EP560_03170 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB EP560_03170 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_03170 IPR006638 Elp3/MiaB/NifB EP560_03175 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type EP560_03175 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_03175 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site EP560_03175 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_03175 IPR004839 Aminotransferase, class I/classII EP560_03175 IPR015424 Pyridoxal phosphate-dependent transferase EP560_03180 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC EP560_03180 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_03185 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_03185 IPR004472 Dethiobiotin synthase BioD EP560_03190 IPR006145 Pseudouridine synthase, RsuA/RluA EP560_03190 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP560_03190 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site EP560_03190 IPR036986 RNA-binding S4 domain superfamily EP560_03190 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain EP560_03190 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F EP560_03190 IPR002942 RNA-binding S4 domain EP560_03195 IPR036390 Winged helix DNA-binding domain superfamily EP560_03195 IPR005234 Chromosome segregation/condensation protein ScpB EP560_03195 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_03200 IPR003768 Segregation and condensation protein A EP560_03205 IPR006070 YrdC-like domain EP560_03205 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily EP560_03210 IPR007411 Elongation factor P hydroxylase EP560_03215 IPR003772 Large ribosomal RNA subunit accumulation protein YceD EP560_03215 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria EP560_03220 IPR002677 Ribosomal protein L32p EP560_03220 IPR011332 Zinc-binding ribosomal protein EP560_03225 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding EP560_03225 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type EP560_03225 IPR024925 Malonyl CoA-acyl carrier protein transacylase EP560_03225 IPR014043 Acyl transferase EP560_03225 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase EP560_03225 IPR001227 Acyl transferase domain superfamily EP560_03230 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase EP560_03230 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_03230 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_03230 IPR036291 NAD(P)-binding domain superfamily EP560_03235 IPR003231 Acyl carrier protein (ACP) EP560_03235 IPR006162 Phosphopantetheine attachment site EP560_03235 IPR009081 Phosphopantetheine binding ACP domain EP560_03235 IPR036736 ACP-like superfamily EP560_03240 IPR018392 LysM domain EP560_03240 IPR007055 BON domain EP560_03240 IPR014004 Transport-associated and nodulation domain, bacteria EP560_03240 IPR036779 LysM domain superfamily EP560_03245 IPR013785 Aldolase-type TIM barrel EP560_03245 IPR034291 Thiamine phosphate synthase EP560_03245 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase EP560_03245 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase EP560_03245 IPR004305 Thiaminase-2/PQQC EP560_03245 IPR036206 Thiamin phosphate synthase superfamily EP560_03245 IPR022998 Thiamine phosphate synthase/TenI EP560_03245 IPR029056 Ribokinase-like EP560_03245 IPR016084 Haem oxygenase-like, multi-helical EP560_03255 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB EP560_03255 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily EP560_03270 IPR003190 Aspartate decarboxylase EP560_03270 IPR009010 Aspartate decarboxylase-like domain superfamily EP560_03275 IPR018171 Peptidyl-tRNA hydrolase, conserved site EP560_03275 IPR001328 Peptidyl-tRNA hydrolase EP560_03275 IPR036416 Peptidyl-tRNA hydrolase superfamily EP560_03280 IPR020055 Ribosomal protein L25, short-form EP560_03280 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily EP560_03280 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal EP560_03280 IPR029751 Ribosomal protein L25 EP560_03285 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type EP560_03285 IPR005946 Ribose-phosphate pyrophosphokinase EP560_03285 IPR029057 Phosphoribosyltransferase-like EP560_03285 IPR000836 Phosphoribosyltransferase domain EP560_03285 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain EP560_03285 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site EP560_03310 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase EP560_03310 IPR036554 GHMP kinase, C-terminal domain superfamily EP560_03310 IPR006204 GHMP kinase N-terminal domain EP560_03310 IPR013750 GHMP kinase, C-terminal domain EP560_03310 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_03310 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP560_03315 IPR029046 Lipoprotein localisation LolA/LolB/LppX EP560_03315 IPR004565 Outer membrane lipoprotein LolB EP560_03325 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase EP560_03325 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain EP560_03325 IPR018214 Glutamyl-tRNA reductase, conserved site EP560_03325 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily EP560_03325 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal EP560_03325 IPR036291 NAD(P)-binding domain superfamily EP560_03325 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase EP560_03325 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily EP560_03330 IPR034151 Bacterial DnaG primase, TOPRIM domain EP560_03330 IPR006171 TOPRIM domain EP560_03330 IPR030846 DNA primase DnaG, bacteria EP560_03330 IPR006295 DNA primase, DnaG EP560_03330 IPR019475 DNA primase, DnaB-helicase binding domain EP560_03330 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily EP560_03330 IPR013264 DNA primase, catalytic core, N-terminal EP560_03330 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal EP560_03330 IPR013173 DNA primase DnaG, DnaB-binding domain EP560_03330 IPR002694 Zinc finger, CHC2-type EP560_03330 IPR036977 DNA Primase, CHC2-type zinc finger EP560_03335 IPR011990 Tetratricopeptide-like helical domain superfamily EP560_03335 IPR017689 Outer membrane protein assembly factor BamD EP560_03335 IPR039565 Outer membrane lipoprotein BamD-like EP560_03340 IPR002942 RNA-binding S4 domain EP560_03340 IPR036986 RNA-binding S4 domain superfamily EP560_03340 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP560_03340 IPR006225 Pseudouridine synthase, RluC/RluD EP560_03340 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site EP560_03340 IPR006145 Pseudouridine synthase, RsuA/RluA EP560_03350 IPR005025 NADPH-dependent FMN reductase-like EP560_03350 IPR008254 Flavodoxin/nitric oxide synthase EP560_03350 IPR029039 Flavoprotein-like superfamily EP560_03355 IPR020081 SsrA-binding protein, conserved site EP560_03355 IPR023620 Small protein B EP560_03355 IPR000037 SsrA-binding protein EP560_03360 IPR001980 Phosphopantetheine adenylyltransferase EP560_03360 IPR004821 Cytidyltransferase-like domain EP560_03360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_03365 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain EP560_03365 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site EP560_03385 IPR005119 LysR, substrate-binding EP560_03385 IPR000847 Transcription regulator HTH, LysR EP560_03385 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_03385 IPR036390 Winged helix DNA-binding domain superfamily EP560_03390 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site EP560_03390 IPR024084 Isopropylmalate dehydrogenase-like domain EP560_03390 IPR011829 Tartrate dehydrogenase EP560_03395 IPR000060 BCCT transporter family EP560_03400 IPR029058 Alpha/Beta hydrolase fold EP560_03400 IPR013094 Alpha/beta hydrolase fold-3 EP560_03405 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit EP560_03405 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site EP560_03405 IPR039004 Carnitine monooxygenase oxygenase subunit EP560_03405 IPR017941 Rieske [2Fe-2S] iron-sulphur domain EP560_03405 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain EP560_03405 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP560_03410 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_03410 IPR015590 Aldehyde dehydrogenase domain EP560_03410 IPR016161 Aldehyde/histidinol dehydrogenase EP560_03410 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP560_03410 IPR016160 Aldehyde dehydrogenase, cysteine active site EP560_03410 IPR010102 Succinate semialdehyde dehydrogenase EP560_03410 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_03415 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP560_03415 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP560_03415 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP560_03415 IPR036010 2Fe-2S ferredoxin-like superfamily EP560_03415 IPR000951 Phthalate dioxygenase reductase EP560_03415 IPR017927 FAD-binding domain, ferredoxin reductase-type EP560_03415 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain EP560_03415 IPR039003 Carnitine monooxygenase reductase subunit EP560_03415 IPR012675 Beta-grasp domain superfamily EP560_03415 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site EP560_03415 IPR017938 Riboflavin synthase-like beta-barrel EP560_03430 IPR003010 Carbon-nitrogen hydrolase EP560_03430 IPR036526 Carbon-nitrogen hydrolase superfamily EP560_03430 IPR022310 NAD/GMP synthase EP560_03430 IPR003694 NAD(+) synthetase EP560_03430 IPR000132 Nitrilase/cyanide hydratase, conserved site EP560_03430 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_03430 IPR014445 Glutamine-dependent NAD(+) synthetase EP560_03440 IPR008778 Pirin, C-terminal domain EP560_03440 IPR011051 RmlC-like cupin domain superfamily EP560_03440 IPR014710 RmlC-like jelly roll fold EP560_03440 IPR003829 Pirin, N-terminal domain EP560_03440 IPR012093 Pirin EP560_03450 IPR000794 Beta-ketoacyl synthase EP560_03450 IPR018201 Beta-ketoacyl synthase, active site EP560_03450 IPR014031 Beta-ketoacyl synthase, C-terminal EP560_03450 IPR014030 Beta-ketoacyl synthase, N-terminal EP560_03450 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain EP560_03450 IPR016039 Thiolase-like EP560_03460 IPR006032 Ribosomal protein S12/S23 EP560_03460 IPR005679 Ribosomal protein S12, bacterial-type EP560_03460 IPR012340 Nucleic acid-binding, OB-fold EP560_03465 IPR000235 Ribosomal protein S5/S7 EP560_03465 IPR020606 Ribosomal protein S7, conserved site EP560_03465 IPR023798 Ribosomal protein S7 domain EP560_03465 IPR036823 Ribosomal protein S7 domain superfamily EP560_03465 IPR005717 Ribosomal protein S7, bacterial/organellar-type EP560_03470 IPR041095 Elongation Factor G, domain II EP560_03470 IPR009022 Elongation factor G, domain III EP560_03470 IPR035647 EF-G domain III/V-like EP560_03470 IPR035649 EFG, domain V EP560_03470 IPR000640 Elongation factor EFG, domain V-like EP560_03470 IPR005517 Translation elongation factor EFG/EF2, domain IV EP560_03470 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_03470 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_03470 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP560_03470 IPR005225 Small GTP-binding protein domain EP560_03470 IPR000795 Transcription factor, GTP-binding domain EP560_03470 IPR009000 Translation protein, beta-barrel domain superfamily EP560_03470 IPR004161 Translation elongation factor EFTu-like, domain 2 EP560_03470 IPR004540 Translation elongation factor EFG/EF2 EP560_03470 IPR031157 Tr-type G domain, conserved site EP560_03475 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle EP560_03475 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal EP560_03475 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal EP560_03475 IPR009000 Translation protein, beta-barrel domain superfamily EP560_03475 IPR005225 Small GTP-binding protein domain EP560_03475 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_03475 IPR031157 Tr-type G domain, conserved site EP560_03475 IPR033720 Elongation factor Tu, domain 2 EP560_03475 IPR004161 Translation elongation factor EFTu-like, domain 2 EP560_03475 IPR000795 Transcription factor, GTP-binding domain EP560_03475 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain EP560_03490 IPR016181 Acyl-CoA N-acyltransferase EP560_03490 IPR000182 GNAT domain EP560_03490 IPR006464 N-acetyltransferase RimI/Ard1 EP560_03495 IPR007471 N-end aminoacyl transferase, N-terminal EP560_03495 IPR016181 Acyl-CoA N-acyltransferase EP560_03495 IPR017138 Aspartate/glutamate leucyltransferase EP560_03495 IPR030700 N-end rule aminoacyl transferase EP560_03495 IPR007472 N-end rule aminoacyl transferase, C-terminal EP560_03500 IPR016181 Acyl-CoA N-acyltransferase EP560_03500 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal EP560_03500 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase EP560_03505 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site EP560_03505 IPR023753 FAD/NAD(P)-binding domain EP560_03505 IPR005982 Thioredoxin reductase EP560_03505 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_03510 IPR041027 FtsK alpha domain EP560_03510 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_03510 IPR025199 DNA translocase FtsK, 4TM region EP560_03510 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_03510 IPR036390 Winged helix DNA-binding domain superfamily EP560_03510 IPR002543 FtsK domain EP560_03510 IPR018541 FtsK gamma domain EP560_03515 IPR004291 Transposase, IS66 EP560_03515 IPR024463 Transposase TnpC, homeodomain EP560_03515 IPR024474 Zinc-finger binding domain of transposase IS66 EP560_03515 IPR039552 Transposase IS66, C-terminal EP560_03530 IPR001123 Amino acid exporter protein, LeuE-type EP560_03530 IPR004778 Homoserine/Threonine efflux protein EP560_03545 IPR036707 Cell division topological specificity factor MinE superfamily EP560_03545 IPR005527 Cell division topological specificity factor MinE EP560_03550 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_03550 IPR025501 ATP binding protein MinD EP560_03550 IPR010223 ATP binding protein MinD, bacterial-type EP560_03550 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain EP560_03555 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal EP560_03555 IPR013033 Septum formation inhibitor MinC EP560_03555 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily EP560_03555 IPR005526 Septum formation inhibitor MinC, C-terminal EP560_03565 IPR002123 Phospholipid/glycerol acyltransferase EP560_03570 IPR006665 OmpA-like domain EP560_03570 IPR039567 Glycine zipper domain EP560_03570 IPR006664 Outer membrane protein, bacterial EP560_03570 IPR036737 OmpA-like domain superfamily EP560_03570 IPR006690 Outer membrane protein, OmpA-like, conserved site EP560_03575 IPR034739 UvrD/AddA helicase, N-terminal EP560_03575 IPR005752 ATP-dependent DNA helicase Rep EP560_03575 IPR013986 DExx box DNA helicase domain superfamily EP560_03575 IPR014017 UvrD-like DNA helicase, C-terminal EP560_03575 IPR000212 DNA helicase, UvrD/REP type EP560_03575 IPR014016 UvrD-like helicase, ATP-binding domain EP560_03575 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_03580 IPR029054 dUTPase-like EP560_03580 IPR033704 dUTPase, trimeric EP560_03580 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase EP560_03580 IPR036157 dUTPase-like superfamily EP560_03585 IPR016066 Alpha-D-phosphohexomutase, conserved site EP560_03585 IPR005841 Alpha-D-phosphohexomutase superfamily EP560_03585 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily EP560_03585 IPR005843 Alpha-D-phosphohexomutase, C-terminal EP560_03585 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I EP560_03585 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III EP560_03585 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II EP560_03585 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III EP560_03590 IPR004662 Acetylglutamate kinase family EP560_03590 IPR037528 Acetylglutamate kinase ArgB EP560_03590 IPR001048 Aspartate/glutamate/uridylate kinase EP560_03590 IPR041727 N-Acetyl-L-glutamate kinase, cyclic EP560_03590 IPR036393 Acetylglutamate kinase-like superfamily EP560_03600 IPR017932 Glutamine amidotransferase type 2 domain EP560_03600 IPR029055 Nucleophile aminohydrolases, N-terminal EP560_03600 IPR026869 Putative glutamine amidotransferase type 2 EP560_03605 IPR012312 Haemerythrin-like EP560_03605 IPR016131 Haemerythrin, iron-binding site EP560_03605 IPR035938 Hemerythrin-like superfamily EP560_03605 IPR012827 Haemerythrin, metal-binding domain EP560_03605 IPR023504 Bacteriohemerythrin-like protein EP560_03620 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp EP560_03620 IPR037021 RnfH superfamily EP560_03620 IPR005346 RnfH protein EP560_03625 IPR007450 Lipoprotein SmpA/OmlA EP560_03625 IPR026592 Outer membrane protein assembly factor BamE EP560_03625 IPR037873 BamE-like EP560_03630 IPR002481 Ferric-uptake regulator EP560_03630 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_03630 IPR036390 Winged helix DNA-binding domain superfamily EP560_03635 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_03635 IPR001482 Type II/IV secretion system protein EP560_03635 IPR006321 Pilus retraction protein PilT EP560_03635 IPR003593 AAA+ ATPase domain EP560_03640 IPR001482 Type II/IV secretion system protein EP560_03640 IPR006321 Pilus retraction protein PilT EP560_03640 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_03640 IPR003593 AAA+ ATPase domain EP560_03645 IPR001608 Alanine racemase, N-terminal EP560_03645 IPR029066 PLP-binding barrel EP560_03645 IPR011078 Pyridoxal phosphate homeostasis protein EP560_03650 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_03655 IPR029052 Metallo-dependent phosphatase-like EP560_03655 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain EP560_03655 IPR026843 Nuclease SbcCD subunit D, C-terminal domain EP560_03655 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type EP560_03655 IPR004593 Nuclease SbcCD subunit D EP560_03675 IPR013549 Domain of unknown function DUF1731 EP560_03675 IPR001509 NAD-dependent epimerase/dehydratase EP560_03675 IPR010099 Epimerase family protein SDR39U1 EP560_03675 IPR036291 NAD(P)-binding domain superfamily EP560_03680 IPR012727 Glycine oxidase ThiO EP560_03680 IPR006076 FAD dependent oxidoreductase EP560_03680 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_03685 IPR001731 Delta-aminolevulinic acid dehydratase EP560_03685 IPR030656 Delta-aminolevulinic acid dehydratase, active site EP560_03685 IPR013785 Aldolase-type TIM barrel EP560_03690 IPR003736 Phenylacetic acid degradation-related domain EP560_03690 IPR029069 HotDog domain superfamily EP560_03690 IPR006683 Thioesterase domain EP560_03695 IPR039562 Membrane fusion protein, biotin-lipoyl like domain EP560_03700 IPR020846 Major facilitator superfamily domain EP560_03700 IPR004638 Drug resistance transporter EmrB-like EP560_03700 IPR036259 MFS transporter superfamily EP560_03700 IPR011701 Major facilitator superfamily EP560_03705 IPR000101 Gamma-glutamyltranspeptidase EP560_03705 IPR029055 Nucleophile aminohydrolases, N-terminal EP560_03755 IPR020846 Major facilitator superfamily domain EP560_03755 IPR005828 Major facilitator, sugar transporter-like EP560_03755 IPR005829 Sugar transporter, conserved site EP560_03755 IPR036259 MFS transporter superfamily EP560_03760 IPR002220 DapA-like EP560_03760 IPR020624 Schiff base-forming aldolase, conserved site EP560_03760 IPR013785 Aldolase-type TIM barrel EP560_03760 IPR020625 Schiff base-forming aldolase, active site EP560_03770 IPR007627 RNA polymerase sigma-70 region 2 EP560_03770 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site EP560_03770 IPR014284 RNA polymerase sigma-70 like domain EP560_03770 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 EP560_03770 IPR013325 RNA polymerase sigma factor, region 2 EP560_03770 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_03770 IPR039425 RNA polymerase sigma-70 like EP560_03770 IPR013324 RNA polymerase sigma factor, region 3/4-like EP560_03780 IPR012910 TonB-dependent receptor, plug domain EP560_03780 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_03780 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_03780 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP560_03780 IPR039426 Vitamin B12 transporter BtuB-like EP560_03830 IPR002293 Amino acid/polyamine transporter I EP560_03830 IPR004754 Amino acid antiporter EP560_03835 IPR036589 Homocysteine-binding domain superfamily EP560_03835 IPR003726 Homocysteine-binding domain EP560_03835 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT EP560_03845 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_03845 IPR006231 Malate:quinone-oxidoreductase EP560_03850 IPR012132 Glucose-methanol-choline oxidoreductase EP560_03850 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_03850 IPR011533 Oxygen-dependent choline dehydrogenase EP560_03850 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal EP560_03850 IPR027424 Glucose Oxidase, domain 2 EP560_03850 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal EP560_03855 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_03855 IPR015590 Aldehyde dehydrogenase domain EP560_03855 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP560_03855 IPR011264 Betaine aldehyde dehydrogenase EP560_03855 IPR016160 Aldehyde dehydrogenase, cysteine active site EP560_03855 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_03855 IPR016161 Aldehyde/histidinol dehydrogenase EP560_03860 IPR017757 Transcriptional repressor BetI EP560_03860 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP560_03860 IPR001647 DNA-binding HTH domain, TetR-type EP560_03860 IPR009057 Homeobox-like domain superfamily EP560_03860 IPR039538 BetI-type transcriptional repressor, C-terminal EP560_03865 IPR000060 BCCT transporter family EP560_03865 IPR018093 BCCT transporter, conserved site EP560_03870 IPR018093 BCCT transporter, conserved site EP560_03870 IPR000060 BCCT transporter family EP560_03880 IPR006683 Thioesterase domain EP560_03880 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase EP560_03880 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain EP560_03880 IPR029069 HotDog domain superfamily EP560_03890 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_03890 IPR003495 CobW/HypB/UreG, nucleotide-binding domain EP560_03890 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal EP560_03895 IPR023954 C4-dicarboxylate transport protein EP560_03895 IPR001991 Sodium:dicarboxylate symporter EP560_03895 IPR036458 Sodium:dicarboxylate symporter superfamily EP560_03895 IPR018107 Sodium:dicarboxylate symporter, conserved site EP560_03900 IPR009822 YaeQ EP560_03900 IPR038590 YaeQ superfamily EP560_03900 IPR011335 Restriction endonuclease type II-like EP560_03905 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain EP560_03910 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel EP560_03910 IPR002509 NodB homology domain EP560_03910 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB EP560_03910 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal EP560_03915 IPR001173 Glycosyltransferase 2-like EP560_03915 IPR029044 Nucleotide-diphospho-sugar transferases EP560_03915 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA EP560_03925 IPR022852 Carnitinyl-CoA dehydratase EP560_03925 IPR029045 ClpP/crotonase-like domain superfamily EP560_03925 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site EP560_03925 IPR001753 Enoyl-CoA hydratase/isomerase EP560_03925 IPR014748 Enoyl-CoA hydratase, C-terminal EP560_03940 IPR005471 Transcription regulator IclR, N-terminal EP560_03940 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_03940 IPR029016 GAF-like domain superfamily EP560_03940 IPR036390 Winged helix DNA-binding domain superfamily EP560_03940 IPR014757 Transcription regulator IclR, C-terminal EP560_03945 IPR017941 Rieske [2Fe-2S] iron-sulphur domain EP560_03945 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP560_03955 IPR017941 Rieske [2Fe-2S] iron-sulphur domain EP560_03955 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP560_03960 IPR036291 NAD(P)-binding domain superfamily EP560_03960 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_03960 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_03965 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain EP560_03965 IPR017626 2,3-dihydroxybiphenyl 1,2-dioxygenase EP560_03965 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase EP560_03965 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II EP560_03965 IPR037523 Vicinal oxygen chelate (VOC) domain EP560_03970 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_03970 IPR023753 FAD/NAD(P)-binding domain EP560_03970 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily EP560_03970 IPR023744 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin--NAD(+) reductase subunit EP560_03970 IPR028202 Reductase, C-terminal EP560_03975 IPR036259 MFS transporter superfamily EP560_03975 IPR000849 Sugar phosphate transporter EP560_03975 IPR020846 Major facilitator superfamily domain EP560_03975 IPR011701 Major facilitator superfamily EP560_03985 IPR000073 Alpha/beta hydrolase fold-1 EP560_03985 IPR029058 Alpha/Beta hydrolase fold EP560_03990 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_03990 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_03990 IPR036291 NAD(P)-binding domain superfamily EP560_03995 IPR036291 NAD(P)-binding domain superfamily EP560_03995 IPR011182 L-aspartate dehydrogenase EP560_03995 IPR020626 L-aspartate dehydrogenase, prokaryotic EP560_03995 IPR002811 Aspartate dehydrogenase EP560_03995 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding EP560_04000 IPR011264 Betaine aldehyde dehydrogenase EP560_04000 IPR015590 Aldehyde dehydrogenase domain EP560_04000 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_04000 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP560_04000 IPR016160 Aldehyde dehydrogenase, cysteine active site EP560_04000 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_04000 IPR016161 Aldehyde/histidinol dehydrogenase EP560_04005 IPR029035 DHS-like NAD/FAD-binding domain superfamily EP560_04005 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain EP560_04005 IPR000399 TPP-binding enzyme, conserved site EP560_04005 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding EP560_04005 IPR012846 Acetolactate synthase, large subunit, biosynthetic EP560_04005 IPR039368 Acetolactate synthase large subunit, TPP binding domain EP560_04005 IPR012000 Thiamine pyrophosphate enzyme, central domain EP560_04005 IPR029061 Thiamin diphosphate-binding fold EP560_04015 IPR011701 Major facilitator superfamily EP560_04015 IPR036259 MFS transporter superfamily EP560_04015 IPR020846 Major facilitator superfamily domain EP560_04015 IPR005829 Sugar transporter, conserved site EP560_04020 IPR023635 Peptide deformylase EP560_04020 IPR036821 Peptide deformylase superfamily EP560_04025 IPR036513 STAS domain superfamily EP560_04025 IPR002645 STAS domain EP560_04025 IPR015868 Glutaminase EP560_04025 IPR012338 Beta-lactamase/transpeptidase-like EP560_04030 IPR009057 Homeobox-like domain superfamily EP560_04030 IPR018062 HTH domain AraC-type, conserved site EP560_04030 IPR020449 Transcription regulator HTH, AraC- type EP560_04030 IPR018060 DNA binding HTH domain, AraC-type EP560_04030 IPR003313 AraC-type arabinose-binding/dimerisation domain EP560_04030 IPR037923 Transcription regulator HTH-like EP560_04035 IPR036259 MFS transporter superfamily EP560_04035 IPR020846 Major facilitator superfamily domain EP560_04035 IPR011701 Major facilitator superfamily EP560_04040 IPR015443 Aldose 1-epimerase EP560_04040 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase EP560_04040 IPR011013 Galactose mutarotase-like domain superfamily EP560_04040 IPR014718 Glycoside hydrolase-type carbohydrate-binding EP560_04040 IPR018052 Aldose 1-epimerase, conserved site EP560_04055 IPR005119 LysR, substrate-binding EP560_04055 IPR000847 Transcription regulator HTH, LysR EP560_04055 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_04055 IPR036390 Winged helix DNA-binding domain superfamily EP560_04060 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_04060 IPR036291 NAD(P)-binding domain superfamily EP560_04060 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_04065 IPR011701 Major facilitator superfamily EP560_04065 IPR020846 Major facilitator superfamily domain EP560_04065 IPR036259 MFS transporter superfamily EP560_04070 IPR005474 Transketolase, N-terminal EP560_04070 IPR029061 Thiamin diphosphate-binding fold EP560_04075 IPR033248 Transketolase, C-terminal domain EP560_04075 IPR005475 Transketolase-like, pyrimidine-binding domain EP560_04075 IPR029061 Thiamin diphosphate-binding fold EP560_04075 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II EP560_04080 IPR000489 Pterin-binding domain EP560_04080 IPR036724 Cobalamin-binding domain superfamily EP560_04080 IPR011005 Dihydropteroate synthase-like EP560_04080 IPR006158 Cobalamin (vitamin B12)-binding domain EP560_04080 IPR036589 Homocysteine-binding domain superfamily EP560_04080 IPR033706 Methionine synthase, B12-binding domain EP560_04080 IPR011822 Cobalamin-dependent methionine synthase EP560_04080 IPR036594 Methionine synthase domain EP560_04080 IPR003726 Homocysteine-binding domain EP560_04080 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily EP560_04080 IPR004223 Vitamin B12-dependent methionine synthase, activation domain EP560_04080 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain EP560_04085 IPR001204 Phosphate transporter EP560_04090 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site EP560_04090 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP560_04090 IPR001926 Pyridoxal-phosphate dependent enzyme EP560_04090 IPR011780 D-serine ammonia-lyase EP560_04105 IPR005532 Sulfatase-modifying factor enzyme EP560_04105 IPR042095 Sulfatase-modifying factor enzyme superfamily EP560_04105 IPR016187 C-type lectin fold EP560_04110 IPR024607 Sulfatase, conserved site EP560_04110 IPR017850 Alkaline-phosphatase-like, core domain superfamily EP560_04110 IPR000917 Sulfatase, N-terminal EP560_04120 IPR000361 FeS cluster biogenesis EP560_04120 IPR034904 Fe-S cluster assembly domain superfamily EP560_04120 IPR017726 Fe/S biogenesis protein NfuA EP560_04120 IPR035903 HesB-like domain superfamily EP560_04120 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal EP560_04125 IPR039426 Vitamin B12 transporter BtuB-like EP560_04125 IPR010917 TonB-dependent receptor, conserved site EP560_04125 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_04125 IPR012910 TonB-dependent receptor, plug domain EP560_04125 IPR010105 TonB-dependent siderophore receptor EP560_04125 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_04125 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP560_04140 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site EP560_04140 IPR001765 Carbonic anhydrase EP560_04140 IPR036874 Carbonic anhydrase superfamily EP560_04145 IPR036514 SGNH hydrolase superfamily EP560_04145 IPR013830 SGNH hydrolase-type esterase domain EP560_04150 IPR003439 ABC transporter-like EP560_04150 IPR003593 AAA+ ATPase domain EP560_04150 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_04150 IPR017871 ABC transporter, conserved site EP560_04155 IPR038766 Membrane component of ABC transporter, predicted EP560_04160 IPR022764 Peptidase S54, rhomboid domain EP560_04160 IPR035952 Rhomboid-like superfamily EP560_04165 IPR011812 Biosynthetic peptidoglycan transglycosylase EP560_04165 IPR001264 Glycosyl transferase, family 51 EP560_04165 IPR036950 Penicillin binding protein transglycosylase domain EP560_04165 IPR023346 Lysozyme-like domain superfamily EP560_04170 IPR036832 Polyphosphate kinase N-terminal domain superfamily EP560_04170 IPR041108 Polyphosphate kinase, C-terminal domain 1 EP560_04170 IPR025200 Polyphosphate kinase C-terminal domain 2 EP560_04170 IPR036830 Polyphosphate kinase middle domain superfamily EP560_04170 IPR025198 Polyphosphate kinase N-terminal domain EP560_04170 IPR024953 Polyphosphate kinase middle domain EP560_04170 IPR003414 Polyphosphate kinase EP560_04185 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_04185 IPR000847 Transcription regulator HTH, LysR EP560_04185 IPR005119 LysR, substrate-binding EP560_04185 IPR036390 Winged helix DNA-binding domain superfamily EP560_04190 IPR029058 Alpha/Beta hydrolase fold EP560_04190 IPR011942 Poly(3-hydroxyalkanoate) depolymerase EP560_04190 IPR000073 Alpha/beta hydrolase fold-1 EP560_04195 IPR041364 Rubredoxin binding domain EP560_04195 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_04195 IPR023753 FAD/NAD(P)-binding domain EP560_04200 IPR024934 Rubredoxin-like domain EP560_04200 IPR024935 Rubredoxin domain EP560_04200 IPR024922 Rubredoxin EP560_04200 IPR018527 Rubredoxin, iron-binding site EP560_04215 IPR006195 Aminoacyl-tRNA synthetase, class II EP560_04215 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal EP560_04215 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type EP560_04215 IPR002313 Lysine-tRNA ligase, class II EP560_04215 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) EP560_04215 IPR012340 Nucleic acid-binding, OB-fold EP560_04220 IPR038636 Capsule assembly protein Wzi superfamily EP560_04220 IPR026950 Capsule assembly protein Wzi EP560_04230 IPR002500 Phosphoadenosine phosphosulphate reductase EP560_04230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_04230 IPR011784 Sulphate adenylyltransferase, small subunit EP560_04235 IPR031157 Tr-type G domain, conserved site EP560_04235 IPR000795 Transcription factor, GTP-binding domain EP560_04235 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_04235 IPR002891 Adenylyl-sulfate kinase EP560_04235 IPR009000 Translation protein, beta-barrel domain superfamily EP560_04235 IPR011779 Sulphate adenylyltransferase, large subunit EP560_04235 IPR005225 Small GTP-binding protein domain EP560_04235 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain EP560_04235 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal EP560_04250 IPR004680 Citrate transporter-like domain EP560_04250 IPR014738 Citrate transporter EP560_04260 IPR002550 CNNM, transmembrane domain EP560_04260 IPR005170 Transporter-associated domain EP560_04260 IPR016169 FAD-binding, type PCMH, subdomain 2 EP560_04260 IPR000644 CBS domain EP560_04260 IPR036318 FAD-binding, type PCMH-like superfamily EP560_04265 IPR000847 Transcription regulator HTH, LysR EP560_04265 IPR036390 Winged helix DNA-binding domain superfamily EP560_04265 IPR005119 LysR, substrate-binding EP560_04265 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_04270 IPR006254 Isocitrate lyase EP560_04270 IPR039556 ICL/PEPM domain EP560_04270 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily EP560_04270 IPR040442 Pyruvate kinase-like domain superfamily EP560_04285 IPR002669 Urease accessory protein UreD EP560_04290 IPR012010 Urease, gamma subunit EP560_04290 IPR002026 Urease, gamma/gamma-beta subunit EP560_04290 IPR036463 Urease, gamma subunit superfamily EP560_04295 IPR002019 Urease, beta subunit EP560_04295 IPR036461 Urease, beta subunit superfamily EP560_04305 IPR036118 UreE urease accessory, N-terminal domain superfamily EP560_04305 IPR004029 UreE urease accessory, N-terminal EP560_04305 IPR036675 UreE, C-terminal domain superfamily EP560_04305 IPR012406 Urease accessory protein UreE EP560_04305 IPR007864 Urease accessory protein UreE, C-terminal domain EP560_04310 IPR038277 UreF domain superfamily EP560_04310 IPR002639 Urease accessory protein UreF EP560_04315 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_04315 IPR003495 CobW/HypB/UreG, nucleotide-binding domain EP560_04315 IPR004400 Urease accessory protein UreG EP560_04325 IPR004398 RNA methyltransferase, RsmD EP560_04325 IPR002052 DNA methylase, N-6 adenine-specific, conserved site EP560_04325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_04330 IPR017790 Penicillin-binding protein 2 EP560_04330 IPR001460 Penicillin-binding protein, transpeptidase EP560_04330 IPR036138 Penicillin-binding protein, dimerisation domain superfamily EP560_04330 IPR012338 Beta-lactamase/transpeptidase-like EP560_04330 IPR005311 Penicillin-binding protein, dimerisation domain EP560_04345 IPR033690 Adenylate kinase, conserved site EP560_04345 IPR007862 Adenylate kinase, active site lid domain EP560_04345 IPR006259 Adenylate kinase subfamily EP560_04345 IPR000850 Adenylate kinase/UMP-CMP kinase EP560_04345 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_04355 IPR004035 Endonuclease III, iron-sulphur binding site EP560_04355 IPR003265 HhH-GPD domain EP560_04355 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal EP560_04355 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif EP560_04355 IPR005759 Endonuclease III EP560_04355 IPR011257 DNA glycosylase EP560_04355 IPR004036 Endonuclease III-like, conserved site-2 EP560_04355 IPR000445 Helix-hairpin-helix motif EP560_04360 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain EP560_04360 IPR007202 4Fe-4S domain EP560_04360 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria EP560_04360 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB EP560_04360 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site EP560_04360 IPR011005 Dihydropteroate synthase-like EP560_04365 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain EP560_04365 IPR036291 NAD(P)-binding domain superfamily EP560_04365 IPR033524 Leu/Phe/Val dehydrogenases active site EP560_04365 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal EP560_04365 IPR033922 NAD(P) binding domain of glutamate dehydrogenase EP560_04365 IPR014362 Glutamate dehydrogenase EP560_04365 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase EP560_04375 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B EP560_04375 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type EP560_04380 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal EP560_04380 IPR003742 RNA methyltransferase RlmH EP560_04380 IPR029028 Alpha/beta knot methyltransferases EP560_04385 IPR008268 Peptidase S16, active site EP560_04385 IPR015947 PUA-like superfamily EP560_04385 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_04385 IPR027065 Lon protease EP560_04385 IPR008269 Peptidase S16, Lon proteolytic domain EP560_04385 IPR004815 Lon protease, bacterial/eukaryotic-type EP560_04385 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP560_04385 IPR003593 AAA+ ATPase domain EP560_04385 IPR003959 ATPase, AAA-type, core EP560_04385 IPR027543 Lon protease, bacterial EP560_04385 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_04385 IPR003111 Lon, substrate-binding domain EP560_04390 IPR008635 Coiled stalk of trimeric autotransporter adhesin EP560_04390 IPR008640 Head domain of trimeric autotransporter adhesin EP560_04390 IPR005594 YadA-like, C-terminal EP560_04390 IPR024973 ESPR domain EP560_04390 IPR011049 Serralysin-like metalloprotease, C-terminal EP560_04400 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily EP560_04400 IPR002698 5-formyltetrahydrofolate cyclo-ligase EP560_04400 IPR037171 NagB/RpiA transferase-like EP560_04565 IPR025668 Transposase DDE domain EP560_04785 IPR013762 Integrase-like, catalytic domain superfamily EP560_04785 IPR011010 DNA breaking-rejoining enzyme, catalytic core EP560_04785 IPR025166 Integrase, DNA-binding domain EP560_04785 IPR010998 Integrase/recombinase, N-terminal EP560_04785 IPR038488 Integrase, DNA-binding domain superfamily EP560_04785 IPR002104 Integrase, catalytic domain EP560_04795 IPR000109 Proton-dependent oligopeptide transporter family EP560_04795 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site EP560_04795 IPR020846 Major facilitator superfamily domain EP560_04795 IPR005279 Dipeptide/tripeptide permease EP560_04795 IPR036259 MFS transporter superfamily EP560_04805 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily EP560_04805 IPR007440 Chorismate--pyruvate lyase EP560_04810 IPR006370 4-hydroxybenzoate polyprenyltransferase-like EP560_04810 IPR039653 Prenyltransferase EP560_04810 IPR000537 UbiA prenyltransferase family EP560_04845 IPR001189 Manganese/iron superoxide dismutase EP560_04845 IPR019831 Manganese/iron superoxide dismutase, N-terminal EP560_04845 IPR019833 Manganese/iron superoxide dismutase, binding site EP560_04845 IPR019832 Manganese/iron superoxide dismutase, C-terminal EP560_04845 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily EP560_04845 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily EP560_04850 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily EP560_04850 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 EP560_04855 IPR001478 PDZ domain EP560_04855 IPR036034 PDZ superfamily EP560_04855 IPR011782 Peptidase S1C, Do EP560_04855 IPR009003 Peptidase S1, PA clan EP560_04855 IPR001940 Peptidase S1C EP560_04860 IPR012006 tRNA nucleotidyltransferase, proteobacteria EP560_04860 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain EP560_04860 IPR002646 Poly A polymerase, head domain EP560_04860 IPR003607 HD/PDEase domain EP560_04865 IPR012301 Malic enzyme, N-terminal domain EP560_04865 IPR015884 Malic enzyme, conserved site EP560_04865 IPR012302 Malic enzyme, NAD-binding EP560_04865 IPR037062 Malic enzyme, N-terminal domain superfamily EP560_04865 IPR012188 NAD(P)-dependent malic enzyme EP560_04865 IPR002505 Phosphate acetyl/butaryl transferase EP560_04865 IPR042113 Phosphate acetyltransferase, domain 1 EP560_04865 IPR042112 Phosphate acetyltransferase, domain 2 EP560_04865 IPR036291 NAD(P)-binding domain superfamily EP560_04870 IPR001633 EAL domain EP560_04870 IPR035919 EAL domain superfamily EP560_04870 IPR029787 Nucleotide cyclase EP560_04870 IPR005330 MHYT domain EP560_04870 IPR000160 GGDEF domain EP560_04875 IPR025668 Transposase DDE domain EP560_04880 IPR029028 Alpha/beta knot methyltransferases EP560_04880 IPR015947 PUA-like superfamily EP560_04880 IPR006700 Ribosomal RNA small subunit methyltransferase E EP560_04880 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal EP560_04885 IPR004620 5,10-methylenetetrahydrofolate reductase EP560_04885 IPR003171 Methylenetetrahydrofolate reductase EP560_04885 IPR029041 FAD-linked oxidoreductase-like EP560_04890 IPR036291 NAD(P)-binding domain superfamily EP560_04890 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site EP560_04890 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EP560_04890 IPR000043 Adenosylhomocysteinase-like EP560_04890 IPR042172 Adenosylhomocysteinase-like superfamily EP560_04905 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_04905 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_04905 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type EP560_04905 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_04905 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_04905 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_04910 IPR007197 Radical SAM EP560_04910 IPR003698 Lipoyl synthase EP560_04910 IPR006638 Elp3/MiaB/NifB EP560_04910 IPR013785 Aldolase-type TIM barrel EP560_04915 IPR022962 Soluble pyridine nucleotide transhydrogenase EP560_04915 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EP560_04915 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_04915 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I EP560_04915 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily EP560_04915 IPR023753 FAD/NAD(P)-binding domain EP560_04925 IPR036259 MFS transporter superfamily EP560_04925 IPR020846 Major facilitator superfamily domain EP560_04925 IPR004737 Nitrate transporter EP560_04925 IPR011701 Major facilitator superfamily EP560_04935 IPR001714 Peptidase M24, methionine aminopeptidase EP560_04935 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 EP560_04935 IPR000994 Peptidase M24 EP560_04935 IPR036005 Creatinase/aminopeptidase-like EP560_04940 IPR001865 Ribosomal protein S2 EP560_04940 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid EP560_04940 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily EP560_04940 IPR018130 Ribosomal protein S2, conserved site EP560_04945 IPR001816 Translation elongation factor EFTs/EF1B EP560_04945 IPR036402 Elongation factor Ts, dimerisation domain superfamily EP560_04945 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation EP560_04945 IPR018101 Translation elongation factor Ts, conserved site EP560_04945 IPR009060 UBA-like superfamily EP560_04955 IPR018062 HTH domain AraC-type, conserved site EP560_04955 IPR018060 DNA binding HTH domain, AraC-type EP560_04955 IPR011051 RmlC-like cupin domain superfamily EP560_04955 IPR009057 Homeobox-like domain superfamily EP560_04975 IPR007730 Sporulation-like domain EP560_04975 IPR012997 Rare lipoprotein A EP560_04975 IPR036908 RlpA-like domain superfamily EP560_04975 IPR009009 RlpA-like protein, double-psi beta-barrel domain EP560_04975 IPR034718 Endolytic peptidoglycan transglycosylase RlpA EP560_04980 IPR023346 Lysozyme-like domain superfamily EP560_04980 IPR031304 Transglycosylase SLT domain 2 EP560_04980 IPR011757 Lytic transglycosylase MltB EP560_04985 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB EP560_04985 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site EP560_04985 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA EP560_04995 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal EP560_04995 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 EP560_04995 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF EP560_05000 IPR013525 ABC-2 type transporter EP560_05000 IPR000412 ABC-2 transporter EP560_05005 IPR003593 AAA+ ATPase domain EP560_05005 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_05005 IPR017871 ABC transporter, conserved site EP560_05005 IPR003439 ABC transporter-like EP560_05035 IPR015424 Pyridoxal phosphate-dependent transferase EP560_05035 IPR001085 Serine hydroxymethyltransferase EP560_05035 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site EP560_05035 IPR039429 Serine hydroxymethyltransferase-like domain EP560_05035 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_05035 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_05040 IPR010131 RND efflux system, outer membrane lipoprotein, NodT EP560_05040 IPR003423 Outer membrane efflux protein EP560_05045 IPR001036 Acriflavin resistance protein EP560_05045 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 EP560_05045 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains EP560_05050 IPR006143 RND efflux pump, membrane fusion protein EP560_05050 IPR022824 Multidrug resistance protein MdtA EP560_05050 IPR039562 Membrane fusion protein, biotin-lipoyl like domain EP560_05055 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_05055 IPR036390 Winged helix DNA-binding domain superfamily EP560_05055 IPR005119 LysR, substrate-binding EP560_05055 IPR000847 Transcription regulator HTH, LysR EP560_05060 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP560_05060 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter EP560_05060 IPR018313 Solute-binding protein family 3, conserved site EP560_05065 IPR030199 Histidine transport system permease protein HisQ EP560_05065 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_05065 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain EP560_05065 IPR035906 MetI-like superfamily EP560_05070 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain EP560_05070 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_05070 IPR035906 MetI-like superfamily EP560_05075 IPR017871 ABC transporter, conserved site EP560_05075 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_05075 IPR003593 AAA+ ATPase domain EP560_05075 IPR003439 ABC transporter-like EP560_05075 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type EP560_05080 IPR000390 Small multidrug resistance protein family EP560_05085 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site EP560_05085 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain EP560_05095 IPR015424 Pyridoxal phosphate-dependent transferase EP560_05095 IPR004839 Aminotransferase, class I/classII EP560_05095 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_05095 IPR000524 Transcription regulator HTH, GntR EP560_05095 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_05095 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_05095 IPR036390 Winged helix DNA-binding domain superfamily EP560_05100 IPR003719 Phenazine biosynthesis PhzF protein EP560_05105 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP560_05105 IPR017938 Riboflavin synthase-like beta-barrel EP560_05105 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain EP560_05105 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP560_05105 IPR033892 Ferredoxin--NADP reductase, bacteria EP560_05105 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase EP560_05105 IPR017927 FAD-binding domain, ferredoxin reductase-type EP560_05110 IPR040372 YaeB-like EP560_05110 IPR023368 Uncharacterised protein family UPF0066, conserved site EP560_05110 IPR036413 YaeB-like superfamily EP560_05110 IPR036414 YaeB, N-terminal domain superfamily EP560_05110 IPR023370 TrmO-like, N-terminal domain EP560_05110 IPR041369 TrmO, C-terminal EP560_05120 IPR013369 Type II secretion system GspE EP560_05120 IPR042181 Type II secretion system, protein E, N-terminal EP560_05120 IPR001482 Type II/IV secretion system protein EP560_05120 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_05120 IPR037257 General secretory system II, protein E, N-terminal superfamily EP560_05130 IPR001789 Signal transduction response regulator, receiver domain EP560_05130 IPR001867 OmpR/PhoB-type DNA-binding domain EP560_05130 IPR039420 Transcriptional regulatory protein WalR-like EP560_05130 IPR011006 CheY-like superfamily EP560_05130 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_05135 IPR013727 Two-component sensor kinase, N-terminal EP560_05135 IPR003594 Histidine kinase/HSP90-like ATPase EP560_05135 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_05135 IPR005467 Histidine kinase domain EP560_05135 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP560_05135 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP560_05135 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP560_05145 IPR000086 NUDIX hydrolase domain EP560_05145 IPR015797 NUDIX hydrolase-like domain superfamily EP560_05145 IPR020476 NUDIX hydrolase EP560_05145 IPR003561 Mutator MutT EP560_05145 IPR020084 NUDIX hydrolase, conserved site EP560_05155 IPR001460 Penicillin-binding protein, transpeptidase EP560_05155 IPR036950 Penicillin binding protein transglycosylase domain EP560_05155 IPR011813 Penicillin-binding protein 1B EP560_05155 IPR023346 Lysozyme-like domain superfamily EP560_05155 IPR001264 Glycosyl transferase, family 51 EP560_05155 IPR012338 Beta-lactamase/transpeptidase-like EP560_05155 IPR028166 Bifunctional transglycosylase second domain EP560_05160 IPR002504 NAD kinase EP560_05160 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal EP560_05160 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal EP560_05160 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily EP560_05165 IPR009749 Protein of unknown function DUF1315 EP560_05170 IPR005940 Anthranilate phosphoribosyl transferase EP560_05170 IPR017459 Glycosyl transferase family 3, N-terminal domain EP560_05170 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily EP560_05170 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily EP560_05170 IPR000312 Glycosyl transferase, family 3 EP560_05180 IPR023954 C4-dicarboxylate transport protein EP560_05180 IPR036458 Sodium:dicarboxylate symporter superfamily EP560_05180 IPR018107 Sodium:dicarboxylate symporter, conserved site EP560_05180 IPR001991 Sodium:dicarboxylate symporter EP560_05185 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_05185 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_05185 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_05185 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_05185 IPR006089 Acyl-CoA dehydrogenase, conserved site EP560_05185 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_05185 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_05190 IPR000801 Putative esterase EP560_05190 IPR029058 Alpha/Beta hydrolase fold EP560_05195 IPR018528 Prephenate dehydratase, conserved site EP560_05195 IPR001086 Prephenate dehydratase EP560_05195 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain EP560_05195 IPR036263 Chorismate mutase type II superfamily EP560_05195 IPR002701 Chorismate mutase II, prokaryotic-type EP560_05195 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase EP560_05195 IPR002912 ACT domain EP560_05195 IPR036979 Chorismate mutase domain superfamily EP560_05200 IPR001986 Enolpyruvate transferase domain EP560_05200 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site EP560_05200 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase EP560_05200 IPR036968 Enolpyruvate transferase domain superfamily EP560_05200 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta EP560_05210 IPR002933 Peptidase M20 EP560_05210 IPR011650 Peptidase M20, dimerisation domain EP560_05210 IPR001160 Peptidase M20C, Xaa-His dipeptidase EP560_05215 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP560_05215 IPR001279 Metallo-beta-lactamase EP560_05215 IPR013471 Ribonuclease Z/BN EP560_05225 IPR005583 Peroxide stress protein YaaA EP560_05235 IPR033983 Thiazole synthase ThiG EP560_05235 IPR013785 Aldolase-type TIM barrel EP560_05235 IPR008867 Thiazole synthase EP560_05245 IPR006696 Protein of unknown function DUF423 EP560_05250 IPR014284 RNA polymerase sigma-70 like domain EP560_05250 IPR000943 RNA polymerase sigma-70 EP560_05250 IPR009042 RNA polymerase sigma-70 region 1.2 EP560_05250 IPR007627 RNA polymerase sigma-70 region 2 EP560_05250 IPR013324 RNA polymerase sigma factor, region 3/4-like EP560_05250 IPR013325 RNA polymerase sigma factor, region 2 EP560_05250 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria EP560_05250 IPR007630 RNA polymerase sigma-70 region 4 EP560_05260 IPR011129 Cold shock domain EP560_05260 IPR012156 Cold shock, CspA EP560_05260 IPR002059 Cold-shock protein, DNA-binding EP560_05260 IPR019844 Cold-shock (CSD) domain EP560_05260 IPR012340 Nucleic acid-binding, OB-fold EP560_05265 IPR023554 ATP-dependent RNA helicase RhlB type EP560_05265 IPR014014 RNA helicase, DEAD-box type, Q motif EP560_05265 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site EP560_05265 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_05265 IPR001650 Helicase, C-terminal EP560_05265 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP560_05265 IPR011545 DEAD/DEAH box helicase domain EP560_05275 IPR026021 Putative NAD(P)H nitroreductase YdjA-like EP560_05275 IPR029479 Nitroreductase EP560_05275 IPR000415 Nitroreductase-like EP560_05280 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal EP560_05280 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal EP560_05280 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent EP560_05280 IPR013328 6-phosphogluconate dehydrogenase, domain 2 EP560_05280 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP560_05280 IPR036291 NAD(P)-binding domain superfamily EP560_05300 IPR001295 Dihydroorotate dehydrogenase, conserved site EP560_05300 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 EP560_05300 IPR005720 Dihydroorotate dehydrogenase domain EP560_05300 IPR013785 Aldolase-type TIM barrel EP560_05300 IPR005719 Dihydroorotate dehydrogenase, class 2 EP560_05305 IPR003825 Colicin V production, CvpA EP560_05310 IPR000836 Phosphoribosyltransferase domain EP560_05310 IPR029055 Nucleophile aminohydrolases, N-terminal EP560_05310 IPR029057 Phosphoribosyltransferase-like EP560_05310 IPR035584 Amidophosphoribosyltransferase, N-terminal EP560_05310 IPR017932 Glutamine amidotransferase type 2 domain EP560_05310 IPR005854 Amidophosphoribosyltransferase EP560_05325 IPR036291 NAD(P)-binding domain superfamily EP560_05325 IPR023756 Glyoxylate/hydroxypyruvate reductase B EP560_05325 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain EP560_05325 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site EP560_05325 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EP560_05330 IPR030873 Beta-barrel assembly-enhancing protease EP560_05330 IPR011990 Tetratricopeptide-like helical domain superfamily EP560_05330 IPR001915 Peptidase M48 EP560_05335 IPR019004 Uncharacterised protein YqeY/Aim41 EP560_05335 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like EP560_05335 IPR042184 YqeY/Aim41, N-terminal domain EP560_05335 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 EP560_05340 IPR018278 Ribosomal protein S21, conserved site EP560_05340 IPR038380 Ribosomal protein S21 superfamily EP560_05340 IPR001911 Ribosomal protein S21 EP560_05345 IPR017861 Kae1/TsaD family EP560_05345 IPR017860 Peptidase M22, conserved site EP560_05345 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD EP560_05345 IPR000905 Gcp-like domain EP560_05365 IPR000719 Protein kinase domain EP560_05365 IPR011009 Protein kinase-like domain superfamily EP560_05365 IPR017441 Protein kinase, ATP binding site EP560_05365 IPR008271 Serine/threonine-protein kinase, active site EP560_05390 IPR036390 Winged helix DNA-binding domain superfamily EP560_05390 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_05390 IPR000847 Transcription regulator HTH, LysR EP560_05390 IPR005119 LysR, substrate-binding EP560_05395 IPR005814 Aminotransferase class-III EP560_05395 IPR015424 Pyridoxal phosphate-dependent transferase EP560_05395 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_05395 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_05400 IPR010061 Methylmalonate-semialdehyde dehydrogenase EP560_05400 IPR015590 Aldehyde dehydrogenase domain EP560_05400 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_05400 IPR016161 Aldehyde/histidinol dehydrogenase EP560_05400 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_05400 IPR016160 Aldehyde dehydrogenase, cysteine active site EP560_05405 IPR004840 Amino acid permease, conserved site EP560_05405 IPR004841 Amino acid permease/ SLC12A domain EP560_05405 IPR011265 GABA permease EP560_05435 IPR005220 Bacterial OB-fold EP560_05435 IPR016052 Bacteriophage 933W, L0136 EP560_05435 IPR036700 Bacterial OB-fold superfamily EP560_05460 IPR000073 Alpha/beta hydrolase fold-1 EP560_05460 IPR029058 Alpha/Beta hydrolase fold EP560_05460 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit EP560_05465 IPR004445 Sodium/glutamate symport carrier protein GltS EP560_05475 IPR036390 Winged helix DNA-binding domain superfamily EP560_05475 IPR011711 GntR, C-terminal EP560_05475 IPR008920 Transcription regulator FadR/GntR, C-terminal EP560_05475 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_05475 IPR000524 Transcription regulator HTH, GntR EP560_05525 IPR036259 MFS transporter superfamily EP560_05525 IPR005829 Sugar transporter, conserved site EP560_05525 IPR020846 Major facilitator superfamily domain EP560_05525 IPR004736 MFS transporter, metabolite:H symporter EP560_05525 IPR015041 Osmosensory transporter coiled coil EP560_05525 IPR005828 Major facilitator, sugar transporter-like EP560_05525 IPR036292 Proline/betaine transporter ProP, C-terminal EP560_05550 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site EP560_05550 IPR004839 Aminotransferase, class I/classII EP560_05550 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_05550 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_05550 IPR022518 Aspartate 4-decarboxylase EP560_05550 IPR015424 Pyridoxal phosphate-dependent transferase EP560_05555 IPR006512 YidE/YbjL duplication EP560_05555 IPR006037 Regulator of K+ conductance, C-terminal EP560_05555 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily EP560_05555 IPR022457 Aspartate-alanine antiporter EP560_05565 IPR007498 Intermembrane transport protein PqiA-like EP560_05565 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type EP560_05570 IPR003399 Mce/MlaD EP560_05580 IPR001920 Asp/Glu racemase EP560_05580 IPR015942 Asp/Glu/hydantoin racemase EP560_05580 IPR033134 Asp/Glu racemase, active site 2 EP560_05580 IPR004380 Aspartate racemase EP560_05580 IPR018187 Asp/Glu racemase, active site 1 EP560_05585 IPR000620 EamA domain EP560_05590 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase EP560_05590 IPR012938 Glucose/Sorbosone dehydrogenase EP560_05590 IPR011042 Six-bladed beta-propeller, TolB-like EP560_05610 IPR001991 Sodium:dicarboxylate symporter EP560_05610 IPR018107 Sodium:dicarboxylate symporter, conserved site EP560_05610 IPR023954 C4-dicarboxylate transport protein EP560_05610 IPR036458 Sodium:dicarboxylate symporter superfamily EP560_05620 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP560_05620 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain EP560_05620 IPR017782 Hydroxyacylglutathione hydrolase EP560_05620 IPR001279 Metallo-beta-lactamase EP560_05620 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain EP560_05625 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_05625 IPR035906 MetI-like superfamily EP560_05630 IPR003439 ABC transporter-like EP560_05630 IPR026253 Methionine import ATP-binding protein MetN EP560_05630 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_05630 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain EP560_05630 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal EP560_05630 IPR017871 ABC transporter, conserved site EP560_05630 IPR003593 AAA+ ATPase domain EP560_05630 IPR018449 NIL domain EP560_05635 IPR004872 Lipoprotein NlpA family EP560_05640 IPR013815 ATP-grasp fold, subdomain 1 EP560_05640 IPR020560 Phosphoribosylglycinamide synthetase, C-domain EP560_05640 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily EP560_05640 IPR011054 Rudiment single hybrid motif EP560_05640 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal EP560_05640 IPR020559 Phosphoribosylglycinamide synthetase, conserved site EP560_05640 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EP560_05640 IPR000115 Phosphoribosylglycinamide synthetase EP560_05640 IPR016185 Pre-ATP-grasp domain superfamily EP560_05640 IPR011761 ATP-grasp fold EP560_05645 IPR036914 Methylglyoxal synthase-like domain superfamily EP560_05645 IPR024051 AICAR transformylase, duplicated domain superfamily EP560_05645 IPR016193 Cytidine deaminase-like EP560_05645 IPR011607 Methylglyoxal synthase-like domain EP560_05645 IPR002695 Bifunctional purine biosynthesis protein PurH-like EP560_05650 IPR009057 Homeobox-like domain superfamily EP560_05650 IPR005412 DNA-binding protein Fis EP560_05650 IPR002197 DNA binding HTH domain, Fis-type EP560_05660 IPR004498 Ribosomal protein L11 methyltransferase EP560_05660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_05670 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG EP560_05670 IPR026904 GidA associated domain 3 EP560_05670 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_05670 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related EP560_05670 IPR020595 MnmG-related, conserved site EP560_05680 IPR025841 Circularly permuted ATP-grasp type 2 EP560_05680 IPR016450 Uncharacterised conserved protein UCP005522 EP560_05690 IPR013589 Bacterial transglutaminase-like, N-terminal EP560_05690 IPR038765 Papain-like cysteine peptidase superfamily EP560_05690 IPR002931 Transglutaminase-like EP560_05700 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal EP560_05700 IPR029066 PLP-binding barrel EP560_05700 IPR011079 Alanine racemase, C-terminal EP560_05700 IPR000821 Alanine racemase EP560_05700 IPR001608 Alanine racemase, N-terminal EP560_05705 IPR007694 DNA helicase, DnaB-like, C-terminal EP560_05705 IPR007692 DNA helicase, DnaB type EP560_05705 IPR007693 DNA helicase, DnaB-like, N-terminal EP560_05705 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal EP560_05705 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_05705 IPR003593 AAA+ ATPase domain EP560_05705 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily EP560_05710 IPR020594 Ribosomal protein L9, bacteria/chloroplast EP560_05710 IPR036791 Ribosomal protein L9, C-terminal domain superfamily EP560_05710 IPR000244 Ribosomal protein L9 EP560_05710 IPR009027 Ribosomal protein L9/RNase H1, N-terminal EP560_05710 IPR036935 Ribosomal protein L9, N-terminal domain superfamily EP560_05710 IPR020070 Ribosomal protein L9, N-terminal EP560_05710 IPR020069 Ribosomal protein L9, C-terminal EP560_05715 IPR036870 Ribosomal protein S18 superfamily EP560_05715 IPR018275 Ribosomal protein S18, conserved site EP560_05715 IPR001648 Ribosomal protein S18 EP560_05720 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 EP560_05720 IPR000529 Ribosomal protein S6 EP560_05720 IPR035980 Ribosomal protein S6 superfamily EP560_05720 IPR020814 Ribosomal protein S6, plastid/chloroplast EP560_05720 IPR020815 Ribosomal protein S6, conserved site EP560_05725 IPR000537 UbiA prenyltransferase family EP560_05725 IPR030470 UbiA prenyltransferase conserved site EP560_05725 IPR006369 Protohaem IX farnesyltransferase EP560_05730 IPR014210 Cytochrome o ubiquinol oxidase subunit IV EP560_05730 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes EP560_05735 IPR024791 Cytochrome c oxidase subunit III EP560_05735 IPR000298 Cytochrome c oxidase subunit III-like EP560_05735 IPR035973 Cytochrome c oxidase subunit III-like superfamily EP560_05735 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle EP560_05735 IPR014206 Cytochrome o ubiquinol oxidase, subunit III EP560_05735 IPR033946 Ubiquinol oxidase subunit III domain EP560_05740 IPR023616 Cytochrome c oxidase-like, subunit I domain EP560_05740 IPR036927 Cytochrome c oxidase-like, subunit I superfamily EP560_05740 IPR000883 Cytochrome c oxidase subunit I EP560_05740 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site EP560_05740 IPR014207 Cytochrome o ubiquinol oxidase, subunit I EP560_05745 IPR002429 Cytochrome c oxidase subunit II-like C-terminal EP560_05745 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain EP560_05745 IPR008972 Cupredoxin EP560_05745 IPR010514 COX aromatic rich motif EP560_05745 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily EP560_05745 IPR006333 Cytochrome o ubiquinol oxidase subunit II EP560_05745 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain EP560_05755 IPR008279 PEP-utilising enzyme, mobile domain EP560_05755 IPR006319 Phosphoenolpyruvate synthase EP560_05755 IPR018274 PEP-utilising enzyme, active site EP560_05755 IPR023151 PEP-utilising enzyme, conserved site EP560_05755 IPR036637 Phosphohistidine domain superfamily EP560_05755 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding EP560_05755 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily EP560_05755 IPR040442 Pyruvate kinase-like domain superfamily EP560_05755 IPR000121 PEP-utilising enzyme, C-terminal EP560_05755 IPR013815 ATP-grasp fold, subdomain 1 EP560_05760 IPR005177 Bifunctional kinase-pyrophosphorylase EP560_05760 IPR026530 Phosphoenolpyruvate synthase regulatory protein EP560_05770 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal EP560_05770 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB EP560_05770 IPR002509 NodB homology domain EP560_05770 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel EP560_05775 IPR029044 Nucleotide-diphospho-sugar transferases EP560_05775 IPR001173 Glycosyltransferase 2-like EP560_05775 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA EP560_05780 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD EP560_05790 IPR011251 Luciferase-like domain EP560_05790 IPR036661 Luciferase-like domain superfamily EP560_05790 IPR019949 Luciferase family oxidoreductase, group 1 EP560_05810 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_05810 IPR036390 Winged helix DNA-binding domain superfamily EP560_05810 IPR005119 LysR, substrate-binding EP560_05810 IPR000847 Transcription regulator HTH, LysR EP560_05820 IPR005139 Peptide chain release factor EP560_05820 IPR004373 Peptide chain release factor 1 EP560_05820 IPR000352 Peptide chain release factor class I EP560_05825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_05825 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific EP560_05825 IPR040758 Release factor glutamine methyltransferase, N-terminal domain EP560_05825 IPR025714 Methyltransferase domain EP560_05825 IPR004556 Methyltransferase HemK-like EP560_05825 IPR002052 DNA methylase, N-6 adenine-specific, conserved site EP560_05830 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_05830 IPR035906 MetI-like superfamily EP560_05835 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP560_05835 IPR010067 Aliphatic sulfonates-binding protein EP560_05835 IPR015168 SsuA/THI5-like EP560_05840 IPR018062 HTH domain AraC-type, conserved site EP560_05840 IPR020449 Transcription regulator HTH, AraC- type EP560_05840 IPR018060 DNA binding HTH domain, AraC-type EP560_05840 IPR009057 Homeobox-like domain superfamily EP560_05845 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_05845 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_05845 IPR036291 NAD(P)-binding domain superfamily EP560_05850 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_05850 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_05850 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_05850 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_05850 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_05850 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_05850 IPR006089 Acyl-CoA dehydrogenase, conserved site EP560_05855 IPR042099 AMP-dependent synthetase-like superfamily EP560_05855 IPR020845 AMP-binding, conserved site EP560_05855 IPR025110 AMP-binding enzyme, C-terminal domain EP560_05855 IPR000873 AMP-dependent synthetase/ligase EP560_05860 IPR012349 FMN-binding split barrel EP560_05860 IPR002563 Flavin reductase like domain EP560_05865 IPR012730 Molybdopterin synthase sulfurylase MoeB EP560_05865 IPR000594 THIF-type NAD/FAD binding fold EP560_05865 IPR035985 Ubiquitin-activating enzyme EP560_05870 IPR004147 UbiB domain EP560_05870 IPR000719 Protein kinase domain EP560_05870 IPR011009 Protein kinase-like domain superfamily EP560_05885 IPR023298 P-type ATPase, transmembrane domain superfamily EP560_05885 IPR004623 Potassium-transporting ATPase A chain EP560_05890 IPR023298 P-type ATPase, transmembrane domain superfamily EP560_05890 IPR006391 P-type ATPase, B chain, subfamily IA EP560_05890 IPR018303 P-type ATPase, phosphorylation site EP560_05890 IPR023299 P-type ATPase, cytoplasmic domain N EP560_05890 IPR001757 P-type ATPase EP560_05890 IPR008250 P-type ATPase, A domain superfamily EP560_05890 IPR036412 HAD-like superfamily EP560_05895 IPR003820 Potassium-transporting ATPase C chain EP560_05905 IPR001789 Signal transduction response regulator, receiver domain EP560_05905 IPR011006 CheY-like superfamily EP560_05905 IPR039420 Transcriptional regulatory protein WalR-like EP560_05905 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_05905 IPR001867 OmpR/PhoB-type DNA-binding domain EP560_05910 IPR027303 Glutamine synthetase, glycine-rich site EP560_05910 IPR036651 Glutamine synthetase, N-terminal domain superfamily EP560_05910 IPR008146 Glutamine synthetase, catalytic domain EP560_05910 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain EP560_05920 IPR011566 Ubiquinone biosynthesis protein Coq7 EP560_05920 IPR009078 Ferritin-like superfamily EP560_05925 IPR023727 Lysophospholipid transporter LplT EP560_05925 IPR036259 MFS transporter superfamily EP560_05925 IPR011701 Major facilitator superfamily EP560_05930 IPR000184 Bacterial surface antigen (D15) EP560_05930 IPR035243 TamA, POTRA domain 1 EP560_05930 IPR034746 POTRA domain EP560_05930 IPR039910 Surface antigen D15-like EP560_05930 IPR010827 POTRA domain, BamA/TamA-like EP560_05950 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 EP560_05950 IPR018136 Aconitase family, 4Fe-4S cluster binding site EP560_05950 IPR036008 Aconitase, iron-sulfur domain EP560_05950 IPR004406 Aconitase B EP560_05950 IPR015932 Aconitase, domain 2 EP560_05950 IPR015929 Aconitase B, swivel EP560_05950 IPR015933 Aconitase B, HEAT-like domain EP560_05950 IPR036288 Aconitase B, HEAT-like domain superfamily EP560_05950 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel EP560_05950 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain EP560_05960 IPR014710 RmlC-like jelly roll fold EP560_05960 IPR018490 Cyclic nucleotide-binding-like EP560_05960 IPR018488 Cyclic nucleotide-binding, conserved site EP560_05960 IPR028325 Voltage-gated potassium channel EP560_05960 IPR000595 Cyclic nucleotide-binding domain EP560_05960 IPR005821 Ion transport domain EP560_05965 IPR036259 MFS transporter superfamily EP560_05965 IPR020846 Major facilitator superfamily domain EP560_05965 IPR011701 Major facilitator superfamily EP560_05980 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_05980 IPR000847 Transcription regulator HTH, LysR EP560_05980 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain EP560_05980 IPR005119 LysR, substrate-binding EP560_05980 IPR036390 Winged helix DNA-binding domain superfamily EP560_05985 IPR007382 Uncharacterised protein family UPF0756, transmembrame EP560_05995 IPR036986 RNA-binding S4 domain superfamily EP560_05995 IPR002942 RNA-binding S4 domain EP560_05995 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site EP560_05995 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F EP560_05995 IPR006145 Pseudouridine synthase, RsuA/RluA EP560_05995 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP560_05995 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain EP560_06010 IPR006225 Pseudouridine synthase, RluC/RluD EP560_06010 IPR036986 RNA-binding S4 domain superfamily EP560_06010 IPR002942 RNA-binding S4 domain EP560_06010 IPR006145 Pseudouridine synthase, RsuA/RluA EP560_06010 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site EP560_06010 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP560_06015 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_06015 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE EP560_06020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_06020 IPR020667 DNA mismatch repair protein, MutL EP560_06020 IPR002099 DNA mismatch repair protein family, N-terminal EP560_06020 IPR013507 DNA mismatch repair protein, S5 domain 2-like EP560_06020 IPR014762 DNA mismatch repair, conserved site EP560_06020 IPR014790 MutL, C-terminal, dimerisation EP560_06020 IPR042120 MutL, C-terminal domain, dimerisation subdomain EP560_06020 IPR042121 MutL, C-terminal domain, regulatory subdomain EP560_06020 IPR037198 MutL, C-terminal domain superfamily EP560_06020 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_06020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP560_06020 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms EP560_06025 IPR039657 Dimethylallyltransferase EP560_06025 IPR018022 IPP transferase EP560_06025 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_06030 IPR005001 RNA-binding protein Hfq EP560_06030 IPR010920 LSM domain superfamily EP560_06040 IPR029479 Nitroreductase EP560_06040 IPR033878 Nitroreductase NfsB-like EP560_06040 IPR000415 Nitroreductase-like EP560_06050 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type EP560_06050 IPR010138 UDP-2,3-diacylglucosamine hydrolase EP560_06055 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site EP560_06055 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain EP560_06055 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase EP560_06055 IPR029000 Cyclophilin-like domain superfamily EP560_06060 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal EP560_06060 IPR022861 Glutamine-tRNA ligase, bacterial EP560_06060 IPR004514 Glutamine-tRNA synthetase EP560_06060 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily EP560_06060 IPR000924 Glutamyl/glutaminyl-tRNA synthetase EP560_06060 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain EP560_06060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_06060 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily EP560_06060 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site EP560_06060 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain EP560_06075 IPR017926 Glutamine amidotransferase EP560_06075 IPR029062 Class I glutamine amidotransferase-like EP560_06075 IPR022955 GMP synthase EP560_06075 IPR004739 GMP synthase, glutamine amidotransferase EP560_06075 IPR022310 NAD/GMP synthase EP560_06075 IPR001674 GMP synthase, C-terminal EP560_06075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_06075 IPR025777 GMP synthetase ATP pyrophosphatase domain EP560_06080 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal EP560_06080 IPR009246 Ethanolamine ammonia-lyase light chain EP560_06080 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal EP560_06085 IPR013785 Aldolase-type TIM barrel EP560_06085 IPR010628 Ethanolamine ammonia lyase large subunit EP560_06090 IPR002293 Amino acid/polyamine transporter I EP560_06095 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_06095 IPR016160 Aldehyde dehydrogenase, cysteine active site EP560_06095 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_06095 IPR015590 Aldehyde dehydrogenase domain EP560_06095 IPR016161 Aldehyde/histidinol dehydrogenase EP560_06095 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP560_06100 IPR029016 GAF-like domain superfamily EP560_06110 IPR018211 Alcohol dehydrogenase, iron-type, conserved site EP560_06110 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA EP560_06110 IPR039697 Iron-type alcohol dehydrogenase-like EP560_06115 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_06115 IPR029491 Helicase Helix-turn-helix domain EP560_06115 IPR010285 DNA helicase Pif1-like EP560_06115 IPR003593 AAA+ ATPase domain EP560_06125 IPR011256 Regulatory factor, effector binding domain superfamily EP560_06125 IPR029442 GyrI-like small molecule binding domain EP560_06125 IPR010499 Bacterial transcription activator, effector binding EP560_06130 IPR000417 Hydroxyethylthiazole kinase EP560_06130 IPR029056 Ribokinase-like EP560_06145 IPR014782 Peptidase M1, membrane alanine aminopeptidase EP560_06145 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily EP560_06145 IPR042097 Aminopeptidase N-like , N-terminal EP560_06145 IPR027268 Peptidase M4/M1, CTD superfamily EP560_06145 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold EP560_06145 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily EP560_06145 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal EP560_06145 IPR012779 Peptidase M1, alanyl aminopeptidase EP560_06145 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase EP560_06155 IPR036291 NAD(P)-binding domain superfamily EP560_06155 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_06165 IPR036263 Chorismate mutase type II superfamily EP560_06165 IPR002701 Chorismate mutase II, prokaryotic-type EP560_06165 IPR008240 Chorismate mutase, periplasmic EP560_06170 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP560_06170 IPR019888 Transcription regulator AsnC-type EP560_06170 IPR011008 Dimeric alpha-beta barrel EP560_06170 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP560_06170 IPR000485 AsnC-type HTH domain EP560_06170 IPR011991 ArsR-like helix-turn-helix domain EP560_06170 IPR036390 Winged helix DNA-binding domain superfamily EP560_06170 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_06185 IPR001647 DNA-binding HTH domain, TetR-type EP560_06185 IPR009057 Homeobox-like domain superfamily EP560_06190 IPR012910 TonB-dependent receptor, plug domain EP560_06190 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_06190 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP560_06190 IPR010105 TonB-dependent siderophore receptor EP560_06190 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_06190 IPR039426 Vitamin B12 transporter BtuB-like EP560_06195 IPR010920 LSM domain superfamily EP560_06195 IPR006685 Mechanosensitive ion channel MscS EP560_06195 IPR011066 Mechanosensitive ion channel MscS, C-terminal EP560_06195 IPR030192 Miniconductance mechanosensitive channel YbdG EP560_06230 IPR010105 TonB-dependent siderophore receptor EP560_06230 IPR010917 TonB-dependent receptor, conserved site EP560_06230 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP560_06230 IPR010916 TonB box, conserved site EP560_06230 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_06230 IPR012910 TonB-dependent receptor, plug domain EP560_06230 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_06230 IPR039423 TonB-dependent receptor-like EP560_06250 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_06250 IPR032781 ABC-transporter extension domain EP560_06250 IPR003439 ABC transporter-like EP560_06250 IPR017871 ABC transporter, conserved site EP560_06250 IPR003593 AAA+ ATPase domain EP560_06255 IPR006015 Universal stress protein A family EP560_06255 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_06255 IPR006016 UspA EP560_06270 IPR001757 P-type ATPase EP560_06270 IPR023299 P-type ATPase, cytoplasmic domain N EP560_06270 IPR018303 P-type ATPase, phosphorylation site EP560_06270 IPR023298 P-type ATPase, transmembrane domain superfamily EP560_06270 IPR008250 P-type ATPase, A domain superfamily EP560_06270 IPR036412 HAD-like superfamily EP560_06270 IPR023214 HAD superfamily EP560_06270 IPR006415 P-type ATPase, subfamily IIIB EP560_06270 IPR004014 Cation-transporting P-type ATPase, N-terminal EP560_06270 IPR006068 Cation-transporting P-type ATPase, C-terminal EP560_06275 IPR003416 MgtC/SapB/SrpB/YhiD family EP560_06280 IPR004711 Benzoate transporter EP560_06285 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP560_06285 IPR011991 ArsR-like helix-turn-helix domain EP560_06285 IPR000485 AsnC-type HTH domain EP560_06285 IPR011008 Dimeric alpha-beta barrel EP560_06285 IPR019888 Transcription regulator AsnC-type EP560_06285 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP560_06285 IPR036390 Winged helix DNA-binding domain superfamily EP560_06285 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_06290 IPR004778 Homoserine/Threonine efflux protein EP560_06290 IPR001123 Amino acid exporter protein, LeuE-type EP560_06300 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_06300 IPR036390 Winged helix DNA-binding domain superfamily EP560_06300 IPR005119 LysR, substrate-binding EP560_06300 IPR000847 Transcription regulator HTH, LysR EP560_06310 IPR020613 Thiolase, conserved site EP560_06310 IPR020616 Thiolase, N-terminal EP560_06310 IPR020617 Thiolase, C-terminal EP560_06310 IPR012806 Acetyl-CoA C-acyltransferase FadI EP560_06310 IPR020610 Thiolase, active site EP560_06310 IPR016039 Thiolase-like EP560_06310 IPR002155 Thiolase EP560_06315 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_06315 IPR036291 NAD(P)-binding domain superfamily EP560_06315 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase EP560_06315 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_06335 IPR020846 Major facilitator superfamily domain EP560_06335 IPR036259 MFS transporter superfamily EP560_06335 IPR011701 Major facilitator superfamily EP560_06340 IPR012763 DNA polymerase III, subunit gamma/ tau EP560_06340 IPR003593 AAA+ ATPase domain EP560_06340 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily EP560_06340 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_06340 IPR001270 ClpA/B family EP560_06340 IPR022754 DNA polymerase III, gamma subunit, domain III EP560_06340 IPR021029 DNA polymerase III, tau subunit, domain V EP560_06340 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal EP560_06340 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV EP560_06345 IPR007312 Phosphoesterase EP560_06345 IPR008475 Bacterial phospholipase C, C-terminal domain EP560_06345 IPR017850 Alkaline-phosphatase-like, core domain superfamily EP560_06345 IPR017767 Bacterial phospholipase C, phosphocholine-specific EP560_06345 IPR006311 Twin-arginine translocation pathway, signal sequence EP560_06350 IPR029069 HotDog domain superfamily EP560_06350 IPR006683 Thioesterase domain EP560_06355 IPR018211 Alcohol dehydrogenase, iron-type, conserved site EP560_06355 IPR039697 Iron-type alcohol dehydrogenase-like EP560_06355 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA EP560_06365 IPR017867 Protein-tyrosine phosphatase, low molecular weight EP560_06365 IPR036196 Phosphotyrosine protein phosphatase I superfamily EP560_06365 IPR023485 Phosphotyrosine protein phosphatase I EP560_06370 IPR006094 FAD linked oxidase, N-terminal EP560_06370 IPR016167 FAD-binding, type PCMH, subdomain 1 EP560_06370 IPR016169 FAD-binding, type PCMH, subdomain 2 EP560_06370 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase EP560_06370 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal EP560_06370 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily EP560_06370 IPR016166 FAD-binding domain, PCMH-type EP560_06370 IPR036318 FAD-binding, type PCMH-like superfamily EP560_06385 IPR027283 Glutamate synthase large subunit-like protein, bacteria EP560_06385 IPR024188 Glutamate synthase large subunit-like protein EP560_06385 IPR002932 Glutamate synthase domain EP560_06385 IPR013785 Aldolase-type TIM barrel EP560_06470 IPR001525 C-5 cytosine methyltransferase EP560_06470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_06520 IPR036397 Ribonuclease H superfamily EP560_06520 IPR012337 Ribonuclease H-like superfamily EP560_06520 IPR001598 Transposase, IS30, conserved site EP560_06520 IPR001584 Integrase, catalytic core EP560_06520 IPR025246 Transposase IS30-like HTH domain EP560_06580 IPR039552 Transposase IS66, C-terminal EP560_06580 IPR024463 Transposase TnpC, homeodomain EP560_06580 IPR004291 Transposase, IS66 EP560_06580 IPR024474 Zinc-finger binding domain of transposase IS66 EP560_06660 IPR035069 TTHA1013/TTHA0281-like EP560_06660 IPR031807 HicB-like antitoxin of toxin-antitoxin system EP560_06670 IPR025668 Transposase DDE domain EP560_06675 IPR012549 Phosphoethanolamine transferase, N-terminal EP560_06675 IPR040423 Phosphoethanolamine transferase EP560_06675 IPR000917 Sulfatase, N-terminal EP560_06675 IPR017850 Alkaline-phosphatase-like, core domain superfamily EP560_06685 IPR036259 MFS transporter superfamily EP560_06685 IPR026032 Probable 3-phenylpropionic acid transporter EP560_06685 IPR024989 Major facilitator superfamily associated domain EP560_06695 IPR005481 Biotin carboxylase-like, N-terminal domain EP560_06695 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain EP560_06695 IPR016185 Pre-ATP-grasp domain superfamily EP560_06695 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase EP560_06695 IPR011764 Biotin carboxylation domain EP560_06695 IPR013815 ATP-grasp fold, subdomain 1 EP560_06695 IPR011054 Rudiment single hybrid motif EP560_06695 IPR005482 Biotin carboxylase, C-terminal EP560_06695 IPR011761 ATP-grasp fold EP560_06700 IPR001249 Acetyl-CoA biotin carboxyl carrier EP560_06700 IPR001882 Biotin-binding site EP560_06700 IPR000089 Biotin/lipoyl attachment EP560_06700 IPR011053 Single hybrid motif EP560_06705 IPR036441 Dehydroquinase, class II superfamily EP560_06705 IPR001874 Dehydroquinase, class II EP560_06705 IPR018509 Dehydroquinase, class II, conserved site EP560_06710 IPR025188 Domain of unknown function DUF4113 EP560_06710 IPR017961 DNA polymerase, Y-family, little finger domain EP560_06710 IPR036775 DNA polymerase, Y-family, little finger domain superfamily EP560_06710 IPR001126 UmuC domain EP560_06720 IPR017871 ABC transporter, conserved site EP560_06720 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_06720 IPR005890 Nitrate transport ATP-binding subunit C/D EP560_06720 IPR003439 ABC transporter-like EP560_06720 IPR003593 AAA+ ATPase domain EP560_06725 IPR001789 Signal transduction response regulator, receiver domain EP560_06725 IPR016032 Signal transduction response regulator, C-terminal effector EP560_06725 IPR011006 CheY-like superfamily EP560_06725 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_06725 IPR039420 Transcriptional regulatory protein WalR-like EP560_06725 IPR001867 OmpR/PhoB-type DNA-binding domain EP560_06735 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily EP560_06735 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP560_06735 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB EP560_06735 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain EP560_06735 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site EP560_06735 IPR007419 BFD-like [2Fe-2S]-binding domain EP560_06735 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily EP560_06735 IPR023753 FAD/NAD(P)-binding domain EP560_06735 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_06735 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal EP560_06735 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain EP560_06735 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type EP560_06740 IPR007419 BFD-like [2Fe-2S]-binding domain EP560_06740 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal EP560_06740 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site EP560_06740 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily EP560_06740 IPR017121 Nitrite reductase [NAD(P)H], large subunit EP560_06740 IPR023753 FAD/NAD(P)-binding domain EP560_06740 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB EP560_06740 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_06740 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily EP560_06740 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain EP560_06740 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily EP560_06740 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain EP560_06745 IPR009010 Aspartate decarboxylase-like domain superfamily EP560_06745 IPR006656 Molybdopterin oxidoreductase EP560_06745 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site EP560_06745 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain EP560_06745 IPR006657 Molybdopterin dinucleotide-binding domain EP560_06745 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain EP560_06745 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily EP560_06745 IPR007419 BFD-like [2Fe-2S]-binding domain EP560_06750 IPR025877 MobA-like NTP transferase EP560_06750 IPR029044 Nucleotide-diphospho-sugar transferases EP560_06750 IPR013482 Molybdenum cofactor guanylyltransferase EP560_06755 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain EP560_06755 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain EP560_06755 IPR009010 Aspartate decarboxylase-like domain superfamily EP560_06755 IPR006657 Molybdopterin dinucleotide-binding domain EP560_06755 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site EP560_06755 IPR006656 Molybdopterin oxidoreductase EP560_06760 IPR007197 Radical SAM EP560_06760 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site EP560_06760 IPR013483 Molybdenum cofactor biosynthesis protein A EP560_06760 IPR006638 Elp3/MiaB/NifB EP560_06760 IPR013785 Aldolase-type TIM barrel EP560_06760 IPR010505 Molybdenum cofactor synthesis C-terminal EP560_06770 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily EP560_06770 IPR003448 Molybdopterin biosynthesis MoaE EP560_06775 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA EP560_06775 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain EP560_06775 IPR001453 MoaB/Mog domain EP560_06775 IPR036425 MoaB/Mog-like domain superfamily EP560_06775 IPR023045 Molybdenum cofactor biosynthesis C EP560_06775 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily EP560_06780 IPR008284 Molybdenum cofactor biosynthesis, conserved site EP560_06780 IPR001453 MoaB/Mog domain EP560_06780 IPR036425 MoaB/Mog-like domain superfamily EP560_06780 IPR005110 MoeA, N-terminal and linker domain EP560_06780 IPR036135 MoeA, N-terminal and linker domain superfamily EP560_06780 IPR005111 MoeA, C-terminal, domain IV EP560_06780 IPR036688 MoeA, C-terminal, domain IV superfamily EP560_06780 IPR038987 Molybdopterin biosynthesis protein MoeA-like EP560_06785 IPR036390 Winged helix DNA-binding domain superfamily EP560_06785 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_06785 IPR011991 ArsR-like helix-turn-helix domain EP560_06785 IPR002577 Helix-turn-helix, HxlR type EP560_06790 IPR004839 Aminotransferase, class I/classII EP560_06790 IPR015424 Pyridoxal phosphate-dependent transferase EP560_06790 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_06790 IPR036390 Winged helix DNA-binding domain superfamily EP560_06790 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_06790 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_06790 IPR000524 Transcription regulator HTH, GntR EP560_06795 IPR000620 EamA domain EP560_06815 IPR017463 Sulphur relay, TusD/DsrE EP560_06815 IPR003787 Sulphur relay, DsrE/F-like protein EP560_06815 IPR027396 DsrEFH-like EP560_06820 IPR016040 NAD(P)-binding domain EP560_06820 IPR036291 NAD(P)-binding domain superfamily EP560_06820 IPR005886 UDP-glucose 4-epimerase EP560_06825 IPR022761 Fumarate lyase, N-terminal EP560_06825 IPR008948 L-Aspartase-like EP560_06825 IPR020557 Fumarate lyase, conserved site EP560_06825 IPR018951 Fumarase C, C-terminal EP560_06825 IPR024083 Fumarase/histidase, N-terminal EP560_06825 IPR005677 Fumarate hydratase, class II EP560_06825 IPR000362 Fumarate lyase family EP560_06850 IPR006076 FAD dependent oxidoreductase EP560_06850 IPR023080 D-amino acid dehydrogenase DadA EP560_06850 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_06860 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase EP560_06860 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily EP560_06860 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site EP560_06870 IPR024904 Ornithine carbamoyltransferase EP560_06870 IPR002292 Ornithine/putrescine carbamoyltransferase EP560_06870 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain EP560_06870 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding EP560_06870 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily EP560_06870 IPR006130 Aspartate/ornithine carbamoyltransferase EP560_06875 IPR023772 DNA-binding HTH domain, TetR-type, conserved site EP560_06875 IPR009057 Homeobox-like domain superfamily EP560_06875 IPR001647 DNA-binding HTH domain, TetR-type EP560_06880 IPR002078 RNA polymerase sigma factor 54 interaction domain EP560_06880 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 EP560_06880 IPR001789 Signal transduction response regulator, receiver domain EP560_06880 IPR025944 Sigma-54 interaction domain, conserved site EP560_06880 IPR010114 DNA-binding transcriptional regulator NtrC EP560_06880 IPR003593 AAA+ ATPase domain EP560_06880 IPR011006 CheY-like superfamily EP560_06880 IPR009057 Homeobox-like domain superfamily EP560_06880 IPR002197 DNA binding HTH domain, Fis-type EP560_06880 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_06880 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 EP560_06885 IPR013767 PAS fold EP560_06885 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP560_06885 IPR005467 Histidine kinase domain EP560_06885 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP560_06885 IPR035965 PAS domain superfamily EP560_06885 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_06885 IPR003594 Histidine kinase/HSP90-like ATPase EP560_06885 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP560_06885 IPR000014 PAS domain EP560_06895 IPR023404 Radical SAM, alpha/beta horseshoe EP560_06895 IPR005839 Methylthiotransferase EP560_06895 IPR005840 Ribosomal protein S12 methylthiotransferase RimO EP560_06895 IPR007197 Radical SAM EP560_06895 IPR006638 Elp3/MiaB/NifB EP560_06895 IPR038135 Methylthiotransferase, N-terminal domain superfamily EP560_06895 IPR002792 TRAM domain EP560_06895 IPR013848 Methylthiotransferase, N-terminal EP560_06895 IPR020612 Methylthiotransferase, conserved site EP560_06895 IPR041582 RimO, TRAM domain EP560_06900 IPR015963 Uridylate kinase, bacteria EP560_06900 IPR036393 Acetylglutamate kinase-like superfamily EP560_06900 IPR001048 Aspartate/glutamate/uridylate kinase EP560_06900 IPR011817 Uridylate kinase EP560_06905 IPR002661 Ribosome recycling factor EP560_06905 IPR023584 Ribosome recycling factor domain EP560_06905 IPR036191 RRF superfamily EP560_06910 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site EP560_06910 IPR001441 Decaprenyl diphosphate synthase-like EP560_06910 IPR036424 Decaprenyl diphosphate synthase-like superfamily EP560_06915 IPR000374 Phosphatidate cytidylyltransferase EP560_06920 IPR036169 DXP reductoisomerase, C-terminal domain superfamily EP560_06920 IPR036291 NAD(P)-binding domain superfamily EP560_06920 IPR026877 DXP reductoisomerase C-terminal domain EP560_06920 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal EP560_06920 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal EP560_06920 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase EP560_06925 IPR008915 Peptidase M50 EP560_06925 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase EP560_06925 IPR036034 PDZ superfamily EP560_06925 IPR001478 PDZ domain EP560_06925 IPR041489 PDZ domain 6 EP560_06930 IPR034746 POTRA domain EP560_06930 IPR023707 Outer membrane protein assembly factor BamA EP560_06930 IPR039910 Surface antigen D15-like EP560_06930 IPR000184 Bacterial surface antigen (D15) EP560_06930 IPR010827 POTRA domain, BamA/TamA-like EP560_06940 IPR001451 Hexapeptide repeat EP560_06940 IPR011004 Trimeric LpxA-like superfamily EP560_06940 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD EP560_06940 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region EP560_06945 IPR029069 HotDog domain superfamily EP560_06945 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ EP560_06945 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ EP560_06950 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily EP560_06950 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal EP560_06950 IPR001451 Hexapeptide repeat EP560_06950 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase EP560_06950 IPR018357 Hexapeptide transferase, conserved site EP560_06950 IPR011004 Trimeric LpxA-like superfamily EP560_06965 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_06965 IPR003783 Regulatory protein RecX EP560_06970 IPR013765 DNA recombination and repair protein RecA EP560_06970 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain EP560_06970 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_06970 IPR003593 AAA+ ATPase domain EP560_06970 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface EP560_06970 IPR023400 DNA recombination and repair protein RecA, C-terminal EP560_06970 IPR020584 DNA recombination/repair protein RecA, conserved site EP560_06975 IPR025708 Heat shock protein 15 EP560_06975 IPR002942 RNA-binding S4 domain EP560_06975 IPR036986 RNA-binding S4 domain superfamily EP560_06980 IPR036412 HAD-like superfamily EP560_06980 IPR041492 Haloacid dehalogenase-like hydrolase EP560_06980 IPR023214 HAD superfamily EP560_06980 IPR006439 HAD hydrolase, subfamily IA EP560_07005 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_07005 IPR000485 AsnC-type HTH domain EP560_07005 IPR011008 Dimeric alpha-beta barrel EP560_07005 IPR019888 Transcription regulator AsnC-type EP560_07005 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP560_07005 IPR036390 Winged helix DNA-binding domain superfamily EP560_07005 IPR011991 ArsR-like helix-turn-helix domain EP560_07005 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP560_07010 IPR000192 Aminotransferase class V domain EP560_07010 IPR010111 Kynureninase EP560_07010 IPR015424 Pyridoxal phosphate-dependent transferase EP560_07010 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_07010 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_07015 IPR004840 Amino acid permease, conserved site EP560_07015 IPR004841 Amino acid permease/ SLC12A domain EP560_07025 IPR000209 Peptidase S8/S53 domain EP560_07025 IPR036852 Peptidase S8/S53 domain superfamily EP560_07025 IPR023827 Peptidase S8, subtilisin, Asp-active site EP560_07025 IPR022398 Peptidase S8, subtilisin, His-active site EP560_07025 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily EP560_07025 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 EP560_07025 IPR015500 Peptidase S8, subtilisin-related EP560_07025 IPR023828 Peptidase S8, subtilisin, Ser-active site EP560_07025 IPR034193 Proteinase K-like catalytic domain EP560_07030 IPR036513 STAS domain superfamily EP560_07030 IPR018045 Sulphate anion transporter, conserved site EP560_07030 IPR011547 SLC26A/SulP transporter domain EP560_07030 IPR002645 STAS domain EP560_07030 IPR001902 SLC26A/SulP transporter EP560_07035 IPR036590 SOS response associated peptidase-like EP560_07035 IPR003738 SOS response associated peptidase (SRAP) EP560_07040 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase EP560_07040 IPR012938 Glucose/Sorbosone dehydrogenase EP560_07040 IPR019893 PQQ-dependent dehydrogenase, s-GDH family EP560_07040 IPR011042 Six-bladed beta-propeller, TolB-like EP560_07050 IPR005330 MHYT domain EP560_07050 IPR035965 PAS domain superfamily EP560_07050 IPR000160 GGDEF domain EP560_07050 IPR035919 EAL domain superfamily EP560_07050 IPR029787 Nucleotide cyclase EP560_07050 IPR001633 EAL domain EP560_07070 IPR003352 Phosphotransferase system, EIIC EP560_07070 IPR013014 Phosphotransferase system, EIIC component, type 2 EP560_07070 IPR006327 Phosphotransferase system, fructose IIC component EP560_07070 IPR003501 Phosphotransferase system, EIIB component, type 2/3 EP560_07070 IPR003353 Phosphotransferase system, fructose-specific IIB subunit EP560_07070 IPR036095 PTS system IIB component-like superfamily EP560_07070 IPR013011 Phosphotransferase system, EIIB component, type 2 EP560_07075 IPR022463 Fructose 1-phosphate kinase EP560_07075 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site EP560_07075 IPR011611 Carbohydrate kinase PfkB EP560_07075 IPR029056 Ribokinase-like EP560_07075 IPR017583 Tagatose/fructose phosphokinase EP560_07080 IPR000121 PEP-utilising enzyme, C-terminal EP560_07080 IPR002114 Phosphotransferase system, HPr serine phosphorylation site EP560_07080 IPR036618 PtsI, HPr-binding domain superfamily EP560_07080 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily EP560_07080 IPR040442 Pyruvate kinase-like domain superfamily EP560_07080 IPR008731 Phosphotransferase system, enzyme I N-terminal EP560_07080 IPR002178 PTS EIIA type-2 domain EP560_07080 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site EP560_07080 IPR018274 PEP-utilising enzyme, active site EP560_07080 IPR016152 Phosphotransferase/anion transporter EP560_07080 IPR008279 PEP-utilising enzyme, mobile domain EP560_07080 IPR035895 HPr-like superfamily EP560_07080 IPR000032 Phosphocarrier protein HPr-like EP560_07080 IPR023151 PEP-utilising enzyme, conserved site EP560_07080 IPR036637 Phosphohistidine domain superfamily EP560_07080 IPR006318 Phosphotransferase system, enzyme I-like EP560_07105 IPR004685 Branched-chain amino acid transport system II carrier protein EP560_07110 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 EP560_07110 IPR001714 Peptidase M24, methionine aminopeptidase EP560_07110 IPR036005 Creatinase/aminopeptidase-like EP560_07110 IPR000994 Peptidase M24 EP560_07115 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_07115 IPR005119 LysR, substrate-binding EP560_07115 IPR000847 Transcription regulator HTH, LysR EP560_07115 IPR036390 Winged helix DNA-binding domain superfamily EP560_07125 IPR033658 Glutaredoxin, PICOT-like EP560_07125 IPR002109 Glutaredoxin EP560_07125 IPR014434 Monothiol glutaredoxin EP560_07125 IPR036249 Thioredoxin-like superfamily EP560_07125 IPR004480 Monothiol glutaredoxin-related EP560_07130 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_07130 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_07130 IPR015424 Pyridoxal phosphate-dependent transferase EP560_07130 IPR005814 Aminotransferase class-III EP560_07130 IPR004636 Acetylornithine/Succinylornithine transaminase family EP560_07135 IPR015875 IMP dehydrogenase / GMP reductase, conserved site EP560_07135 IPR001093 IMP dehydrogenase/GMP reductase EP560_07135 IPR005990 Inosine-5'-monophosphate dehydrogenase EP560_07135 IPR013785 Aldolase-type TIM barrel EP560_07135 IPR000644 CBS domain EP560_07160 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_07160 IPR004390 Signal-recognition particle receptor FtsY EP560_07160 IPR036225 SRP/SRP receptor, N-terminal EP560_07160 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain EP560_07160 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily EP560_07160 IPR003593 AAA+ ATPase domain EP560_07160 IPR013822 Signal recognition particle SRP54, helical bundle EP560_07170 IPR018635 Uncharacterised protein family UPF0319 EP560_07185 IPR011724 Cyd operon protein YbgT EP560_07185 IPR012994 Membrane bound YbgT-like EP560_07190 IPR003317 Cytochrome ubiquinol oxidase subunit 2 EP560_07195 IPR002585 Cytochrome ubiquinol oxidase subunit 1 EP560_07205 IPR025668 Transposase DDE domain EP560_07210 IPR001584 Integrase, catalytic core EP560_07210 IPR025246 Transposase IS30-like HTH domain EP560_07210 IPR012337 Ribonuclease H-like superfamily EP560_07210 IPR036397 Ribonuclease H superfamily EP560_07210 IPR001598 Transposase, IS30, conserved site EP560_07215 IPR010840 Protein of unknown function DUF1449 EP560_07225 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site EP560_07225 IPR011611 Carbohydrate kinase PfkB EP560_07225 IPR029056 Ribokinase-like EP560_07230 IPR012910 TonB-dependent receptor, plug domain EP560_07230 IPR010105 TonB-dependent siderophore receptor EP560_07230 IPR010917 TonB-dependent receptor, conserved site EP560_07230 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP560_07230 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_07230 IPR039423 TonB-dependent receptor-like EP560_07230 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_07235 IPR007863 Peptidase M16, C-terminal EP560_07235 IPR011765 Peptidase M16, N-terminal EP560_07235 IPR013578 Peptidase M16C associated EP560_07235 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like EP560_07240 IPR036541 Phospholipase A1 superfamily EP560_07240 IPR003187 Phospholipase A1 EP560_07245 IPR003445 Cation transporter EP560_07245 IPR004772 TrkH potassium transport family EP560_07250 IPR003148 Regulator of K+ conductance, N-terminal EP560_07250 IPR006037 Regulator of K+ conductance, C-terminal EP560_07250 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily EP560_07250 IPR036291 NAD(P)-binding domain superfamily EP560_07255 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP560_07255 IPR005787 Threonine dehydratase, biosynthetic EP560_07255 IPR001926 Pyridoxal-phosphate dependent enzyme EP560_07255 IPR001721 Threonine dehydratase, ACT-like domain EP560_07255 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site EP560_07255 IPR038110 Threonine dehydratase, ACT-like domain superfamily EP560_07260 IPR037171 NagB/RpiA transferase-like EP560_07260 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup EP560_07260 IPR004788 Ribose 5-phosphate isomerase, type A EP560_07275 IPR036291 NAD(P)-binding domain superfamily EP560_07275 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 EP560_07275 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site EP560_07275 IPR000534 Semialdehyde dehydrogenase, NAD-binding EP560_07275 IPR012280 Semialdehyde dehydrogenase, dimerisation domain EP560_07285 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like EP560_07285 IPR022935 ATP-dependent Clp protease adaptor protein ClpS EP560_07285 IPR003769 Adaptor protein ClpS, core EP560_07290 IPR003959 ATPase, AAA-type, core EP560_07290 IPR019489 Clp ATPase, C-terminal EP560_07290 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_07290 IPR036628 Clp, N-terminal domain superfamily EP560_07290 IPR041546 ClpA/ClpB, AAA lid domain EP560_07290 IPR003593 AAA+ ATPase domain EP560_07290 IPR028299 ClpA/B, conserved site 2 EP560_07290 IPR018368 ClpA/B, conserved site 1 EP560_07290 IPR001270 ClpA/B family EP560_07290 IPR004176 Clp, N-terminal EP560_07290 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA EP560_07295 IPR003844 Uncharacterised protein family UPF0060 EP560_07300 IPR006219 DHAP synthase, class 1 EP560_07300 IPR006218 DAHP synthetase I/KDSA EP560_07300 IPR013785 Aldolase-type TIM barrel EP560_07315 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal EP560_07315 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_07315 IPR023753 FAD/NAD(P)-binding domain EP560_07315 IPR013785 Aldolase-type TIM barrel EP560_07345 IPR017926 Glutamine amidotransferase EP560_07345 IPR017456 CTP synthase, N-terminal EP560_07345 IPR004468 CTP synthase EP560_07345 IPR029062 Class I glutamine amidotransferase-like EP560_07345 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_07345 IPR033828 CTP synthase GATase domain EP560_07350 IPR006269 3-deoxy-8-phosphooctulonate synthase EP560_07350 IPR006218 DAHP synthetase I/KDSA EP560_07350 IPR013785 Aldolase-type TIM barrel EP560_07355 IPR036849 Enolase-like, C-terminal domain superfamily EP560_07355 IPR020811 Enolase, N-terminal EP560_07355 IPR029017 Enolase-like, N-terminal EP560_07355 IPR020809 Enolase, conserved site EP560_07355 IPR000941 Enolase EP560_07355 IPR020810 Enolase, C-terminal TIM barrel domain EP560_07360 IPR023090 UPF0702, alpha/beta domain superfamily EP560_07360 IPR007353 Protein of unknown function DUF421 EP560_07365 IPR023081 Cell division protein FtsB EP560_07365 IPR007060 Septum formation initiator FtsL/DivIC EP560_07370 IPR029044 Nucleotide-diphospho-sugar transferases EP560_07370 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EP560_07370 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site EP560_07370 IPR034683 Cytidylyltransferase IspD/TarI EP560_07375 IPR037171 NagB/RpiA transferase-like EP560_07375 IPR012792 3-oxoacid CoA-transferase, subunit A EP560_07375 IPR004165 Coenzyme A transferase family I EP560_07375 IPR004163 Coenzyme A transferase binding site EP560_07380 IPR004164 Coenzyme A transferase active site EP560_07380 IPR012791 3-oxoacid CoA-transferase, subunit B EP560_07380 IPR037171 NagB/RpiA transferase-like EP560_07380 IPR004165 Coenzyme A transferase family I EP560_07385 IPR020610 Thiolase, active site EP560_07385 IPR002155 Thiolase EP560_07385 IPR012793 Beta-ketoadipyl CoA thiolase EP560_07385 IPR020615 Thiolase, acyl-enzyme intermediate active site EP560_07385 IPR020616 Thiolase, N-terminal EP560_07385 IPR020613 Thiolase, conserved site EP560_07385 IPR020617 Thiolase, C-terminal EP560_07385 IPR016039 Thiolase-like EP560_07390 IPR000362 Fumarate lyase family EP560_07390 IPR022761 Fumarate lyase, N-terminal EP560_07390 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase EP560_07390 IPR024083 Fumarase/histidase, N-terminal EP560_07390 IPR008948 L-Aspartase-like EP560_07390 IPR020557 Fumarate lyase, conserved site EP560_07390 IPR019468 Adenylosuccinate lyase C-terminal EP560_07395 IPR000073 Alpha/beta hydrolase fold-1 EP560_07395 IPR029058 Alpha/Beta hydrolase fold EP560_07395 IPR026968 3-oxoadipate enol-lactonase 1/2 EP560_07400 IPR005829 Sugar transporter, conserved site EP560_07400 IPR036259 MFS transporter superfamily EP560_07400 IPR020846 Major facilitator superfamily domain EP560_07400 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family EP560_07400 IPR011701 Major facilitator superfamily EP560_07405 IPR003779 Carboxymuconolactone decarboxylase-like EP560_07405 IPR012788 4-carboxymuconolactone decarboxylase EP560_07405 IPR029032 AhpD-like EP560_07410 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal EP560_07410 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit EP560_07410 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal EP560_07410 IPR015889 Intradiol ring-cleavage dioxygenase, core EP560_07415 IPR015889 Intradiol ring-cleavage dioxygenase, core EP560_07415 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit EP560_07415 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal EP560_07420 IPR018508 3-dehydroquinate dehydratase, active site EP560_07420 IPR013785 Aldolase-type TIM barrel EP560_07420 IPR001381 3-dehydroquinate dehydratase type I EP560_07425 IPR006626 Parallel beta-helix repeat EP560_07425 IPR011050 Pectin lyase fold/virulence factor EP560_07425 IPR012334 Pectin lyase fold EP560_07425 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain EP560_07430 IPR038673 Carbohydrate-selective porin OprB superfamily EP560_07430 IPR007049 Carbohydrate-selective porin OprB EP560_07435 IPR001479 Quinoprotein dehydrogenase, conserved site EP560_07435 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily EP560_07435 IPR002372 Pyrrolo-quinoline quinone repeat EP560_07435 IPR017511 PQQ-dependent membrane bound dehydrogenase EP560_07435 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat EP560_07445 IPR007272 Sulphur transport domain EP560_07455 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP560_07455 IPR001279 Metallo-beta-lactamase EP560_07460 IPR014757 Transcription regulator IclR, C-terminal EP560_07460 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_07460 IPR005471 Transcription regulator IclR, N-terminal EP560_07460 IPR029016 GAF-like domain superfamily EP560_07460 IPR036390 Winged helix DNA-binding domain superfamily EP560_07460 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR EP560_07465 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_07465 IPR036390 Winged helix DNA-binding domain superfamily EP560_07465 IPR037416 Nodulation protein D, PBP2 EP560_07465 IPR005119 LysR, substrate-binding EP560_07465 IPR000847 Transcription regulator HTH, LysR EP560_07470 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_07470 IPR006089 Acyl-CoA dehydrogenase, conserved site EP560_07470 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_07470 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_07470 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_07470 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_07470 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_07485 IPR036291 NAD(P)-binding domain superfamily EP560_07485 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_07485 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_07495 IPR011701 Major facilitator superfamily EP560_07495 IPR020846 Major facilitator superfamily domain EP560_07495 IPR036259 MFS transporter superfamily EP560_07505 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit EP560_07505 IPR036928 Amidase signature (AS) superfamily EP560_07505 IPR000120 Amidase EP560_07505 IPR023631 Amidase signature domain EP560_07505 IPR020556 Amidase, conserved site EP560_07510 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_07510 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_07510 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_07510 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain EP560_07525 IPR017639 Benzoate 1,2-dioxygenase, large subunit EP560_07525 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit EP560_07525 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain EP560_07525 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site EP560_07525 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP560_07525 IPR017941 Rieske [2Fe-2S] iron-sulphur domain EP560_07535 IPR036291 NAD(P)-binding domain superfamily EP560_07535 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_07535 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_07535 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase EP560_07540 IPR012675 Beta-grasp domain superfamily EP560_07540 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site EP560_07540 IPR000951 Phthalate dioxygenase reductase EP560_07540 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP560_07540 IPR036010 2Fe-2S ferredoxin-like superfamily EP560_07540 IPR017927 FAD-binding domain, ferredoxin reductase-type EP560_07540 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP560_07540 IPR017938 Riboflavin synthase-like beta-barrel EP560_07540 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP560_07545 IPR012349 FMN-binding split barrel EP560_07545 IPR002563 Flavin reductase like domain EP560_07545 IPR036390 Winged helix DNA-binding domain superfamily EP560_07545 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_07550 IPR003313 AraC-type arabinose-binding/dimerisation domain EP560_07550 IPR009057 Homeobox-like domain superfamily EP560_07550 IPR023609 Transcription regulator HTH, RhaS EP560_07550 IPR018060 DNA binding HTH domain, AraC-type EP560_07550 IPR020449 Transcription regulator HTH, AraC- type EP560_07550 IPR014710 RmlC-like jelly roll fold EP560_07550 IPR037923 Transcription regulator HTH-like EP560_07555 IPR012854 Copper amine oxidase-like, N-terminal EP560_07555 IPR015798 Copper amine oxidase, catalytic domain EP560_07555 IPR036460 Copper amine oxidase, catalytic domain superfamily EP560_07555 IPR016182 Copper amine oxidase, N-terminal EP560_07555 IPR000269 Copper amine oxidase EP560_07555 IPR015802 Copper amine oxidase, N3-terminal EP560_07555 IPR015800 Copper amine oxidase, N2-terminal EP560_07555 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily EP560_07565 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_07565 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP560_07565 IPR016160 Aldehyde dehydrogenase, cysteine active site EP560_07565 IPR015590 Aldehyde dehydrogenase domain EP560_07565 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_07565 IPR016161 Aldehyde/histidinol dehydrogenase EP560_07570 IPR023343 Penicillin amidase type, domain 1 EP560_07570 IPR029055 Nucleophile aminohydrolases, N-terminal EP560_07570 IPR014395 Penicillin/GL-7-ACA/AHL acylase EP560_07570 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase EP560_07570 IPR033813 Penicillin G acylase, C-terminal EP560_07575 IPR026968 3-oxoadipate enol-lactonase 1/2 EP560_07575 IPR022742 Serine aminopeptidase, S33 EP560_07575 IPR029058 Alpha/Beta hydrolase fold EP560_07575 IPR000073 Alpha/beta hydrolase fold-1 EP560_07580 IPR020617 Thiolase, C-terminal EP560_07580 IPR020613 Thiolase, conserved site EP560_07580 IPR012793 Beta-ketoadipyl CoA thiolase EP560_07580 IPR002155 Thiolase EP560_07580 IPR016039 Thiolase-like EP560_07580 IPR020615 Thiolase, acyl-enzyme intermediate active site EP560_07580 IPR020610 Thiolase, active site EP560_07580 IPR020616 Thiolase, N-terminal EP560_07585 IPR012791 3-oxoacid CoA-transferase, subunit B EP560_07585 IPR004164 Coenzyme A transferase active site EP560_07585 IPR004165 Coenzyme A transferase family I EP560_07585 IPR037171 NagB/RpiA transferase-like EP560_07590 IPR012792 3-oxoacid CoA-transferase, subunit A EP560_07590 IPR004165 Coenzyme A transferase family I EP560_07590 IPR004163 Coenzyme A transferase binding site EP560_07590 IPR037171 NagB/RpiA transferase-like EP560_07595 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal EP560_07595 IPR012801 Catechol 1,2-dioxygenase, proteobacteria EP560_07595 IPR007535 Catechol dioxygenase, N-terminal EP560_07595 IPR015889 Intradiol ring-cleavage dioxygenase, core EP560_07600 IPR011008 Dimeric alpha-beta barrel EP560_07600 IPR026029 Muconolactone isomerase domain EP560_07600 IPR003464 Muconolactone delta-isomerase EP560_07605 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal EP560_07605 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site EP560_07605 IPR029065 Enolase C-terminal domain-like EP560_07605 IPR029017 Enolase-like, N-terminal EP560_07605 IPR036849 Enolase-like, C-terminal domain superfamily EP560_07605 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain EP560_07605 IPR013370 Muconate/chloromuconate cycloisomerase EP560_07610 IPR036390 Winged helix DNA-binding domain superfamily EP560_07610 IPR005119 LysR, substrate-binding EP560_07610 IPR000847 Transcription regulator HTH, LysR EP560_07610 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_07620 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_07620 IPR000524 Transcription regulator HTH, GntR EP560_07620 IPR036390 Winged helix DNA-binding domain superfamily EP560_07620 IPR008920 Transcription regulator FadR/GntR, C-terminal EP560_07620 IPR011711 GntR, C-terminal EP560_07625 IPR042096 Dihydroxy-acid dehydratase, C-terminal EP560_07625 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase EP560_07625 IPR037237 IlvD/EDD, N-terminal domain EP560_07625 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site EP560_07630 IPR011701 Major facilitator superfamily EP560_07630 IPR036259 MFS transporter superfamily EP560_07630 IPR020846 Major facilitator superfamily domain EP560_07640 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_07640 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_07640 IPR015590 Aldehyde dehydrogenase domain EP560_07640 IPR016161 Aldehyde/histidinol dehydrogenase EP560_07660 IPR006089 Acyl-CoA dehydrogenase, conserved site EP560_07660 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_07660 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_07660 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_07660 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_07660 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_07660 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_07665 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase EP560_07665 IPR036291 NAD(P)-binding domain superfamily EP560_07665 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_07665 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_07670 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal EP560_07670 IPR003593 AAA+ ATPase domain EP560_07670 IPR009057 Homeobox-like domain superfamily EP560_07670 IPR025944 Sigma-54 interaction domain, conserved site EP560_07670 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 EP560_07670 IPR002078 RNA polymerase sigma factor 54 interaction domain EP560_07670 IPR002197 DNA binding HTH domain, Fis-type EP560_07670 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_07670 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR EP560_07675 IPR042099 AMP-dependent synthetase-like superfamily EP560_07675 IPR025110 AMP-binding enzyme, C-terminal domain EP560_07675 IPR000873 AMP-dependent synthetase/ligase EP560_07675 IPR020845 AMP-binding, conserved site EP560_07680 IPR007436 Protein of unknown function DUF485 EP560_07685 IPR014083 Cation/acetate symporter ActP EP560_07685 IPR038377 Sodium/glucose symporter superfamily EP560_07685 IPR001734 Sodium/solute symporter EP560_07685 IPR018212 Sodium/solute symporter, conserved site EP560_07690 IPR036291 NAD(P)-binding domain superfamily EP560_07690 IPR020843 Polyketide synthase, enoylreductase domain EP560_07690 IPR013154 Alcohol dehydrogenase, N-terminal EP560_07690 IPR013149 Alcohol dehydrogenase, C-terminal EP560_07690 IPR011032 GroES-like superfamily EP560_07695 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent EP560_07695 IPR015590 Aldehyde dehydrogenase domain EP560_07695 IPR016161 Aldehyde/histidinol dehydrogenase EP560_07695 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_07695 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_07695 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP560_07705 IPR029058 Alpha/Beta hydrolase fold EP560_07705 IPR000639 Epoxide hydrolase-like EP560_07705 IPR000073 Alpha/beta hydrolase fold-1 EP560_07710 IPR020835 Catalase superfamily EP560_07710 IPR010582 Catalase immune-responsive domain EP560_07710 IPR002226 Catalase haem-binding site EP560_07710 IPR037060 Catalase core domain superfamily EP560_07710 IPR018028 Catalase, mono-functional, haem-containing EP560_07710 IPR011614 Catalase core domain EP560_07710 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 EP560_07710 IPR024708 Catalase active site EP560_07710 IPR040333 Catalase, clade 3 EP560_07730 IPR029058 Alpha/Beta hydrolase fold EP560_07730 IPR013094 Alpha/beta hydrolase fold-3 EP560_07735 IPR036390 Winged helix DNA-binding domain superfamily EP560_07735 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_07735 IPR000835 MarR-type HTH domain EP560_07740 IPR023753 FAD/NAD(P)-binding domain EP560_07740 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_07740 IPR013785 Aldolase-type TIM barrel EP560_07740 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal EP560_07745 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_07745 IPR036291 NAD(P)-binding domain superfamily EP560_07750 IPR024072 Dihydrofolate reductase-like domain superfamily EP560_07750 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal EP560_07755 IPR009061 Putative DNA-binding domain superfamily EP560_07755 IPR015358 Transcription regulator MerR, DNA binding EP560_07755 IPR011789 Cu(I)-responsive transcriptional regulator EP560_07755 IPR000551 MerR-type HTH domain EP560_07765 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_07765 IPR023753 FAD/NAD(P)-binding domain EP560_07775 IPR001279 Metallo-beta-lactamase EP560_07775 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D EP560_07775 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP560_07780 IPR013570 Transcription regulator YsiA, C-terminal EP560_07780 IPR001647 DNA-binding HTH domain, TetR-type EP560_07780 IPR009057 Homeobox-like domain superfamily EP560_07780 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP560_07790 IPR025668 Transposase DDE domain EP560_07800 IPR000868 Isochorismatase-like EP560_07800 IPR036380 Isochorismatase-like superfamily EP560_07805 IPR005119 LysR, substrate-binding EP560_07805 IPR000847 Transcription regulator HTH, LysR EP560_07805 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_07805 IPR036390 Winged helix DNA-binding domain superfamily EP560_07810 IPR019893 PQQ-dependent dehydrogenase, s-GDH family EP560_07810 IPR012938 Glucose/Sorbosone dehydrogenase EP560_07810 IPR011042 Six-bladed beta-propeller, TolB-like EP560_07810 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase EP560_07815 IPR036291 NAD(P)-binding domain superfamily EP560_07815 IPR004771 K+/H+ exchanger EP560_07815 IPR006153 Cation/H+ exchanger EP560_07815 IPR003148 Regulator of K+ conductance, N-terminal EP560_07815 IPR038770 Sodium/solute symporter superfamily EP560_07825 IPR017439 Amidohydrolase EP560_07825 IPR036264 Bacterial exopeptidase dimerisation domain EP560_07825 IPR002933 Peptidase M20 EP560_07825 IPR011650 Peptidase M20, dimerisation domain EP560_07840 IPR035251 ShlB, POTRA domain EP560_07840 IPR034746 POTRA domain EP560_07840 IPR013686 Polypeptide-transport-associated, ShlB-type EP560_07840 IPR005565 Haemolysin activator HlyB, C-terminal EP560_07840 IPR027282 Two partner secretion pathway transporter EP560_07845 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat EP560_07845 IPR024973 ESPR domain EP560_07845 IPR008638 Filamentous haemagglutinin, N-terminal EP560_07845 IPR012334 Pectin lyase fold EP560_07845 IPR025157 Hemagglutinin repeat EP560_07845 IPR006914 VENN motif-containing domain EP560_07845 IPR011050 Pectin lyase fold/virulence factor EP560_07860 IPR011701 Major facilitator superfamily EP560_07860 IPR020846 Major facilitator superfamily domain EP560_07860 IPR036259 MFS transporter superfamily EP560_07865 IPR032466 Metal-dependent hydrolase EP560_07865 IPR006680 Amidohydrolase-related EP560_07880 IPR005511 Senescence marker protein-30 (SMP-30) EP560_07880 IPR013658 SMP-30/Gluconolactonase/LRE-like region EP560_07880 IPR011042 Six-bladed beta-propeller, TolB-like EP560_07890 IPR036390 Winged helix DNA-binding domain superfamily EP560_07890 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_07890 IPR000847 Transcription regulator HTH, LysR EP560_07890 IPR005119 LysR, substrate-binding EP560_07910 IPR011701 Major facilitator superfamily EP560_07910 IPR020846 Major facilitator superfamily domain EP560_07910 IPR036259 MFS transporter superfamily EP560_07915 IPR006236 D-3-phosphoglycerate dehydrogenase EP560_07915 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain EP560_07915 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 EP560_07915 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site EP560_07915 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EP560_07915 IPR002912 ACT domain EP560_07915 IPR036291 NAD(P)-binding domain superfamily EP560_07915 IPR029009 Allosteric substrate binding domain superfamily EP560_07920 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily EP560_07920 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein EP560_07940 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain EP560_07940 IPR005694 Efflux pump membrane protein EP560_07955 IPR016161 Aldehyde/histidinol dehydrogenase EP560_07955 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_07955 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_07955 IPR015590 Aldehyde dehydrogenase domain EP560_07960 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase EP560_07960 IPR037237 IlvD/EDD, N-terminal domain EP560_07960 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site EP560_07960 IPR042096 Dihydroxy-acid dehydratase, C-terminal EP560_07970 IPR005119 LysR, substrate-binding EP560_07970 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_07970 IPR036390 Winged helix DNA-binding domain superfamily EP560_07970 IPR000847 Transcription regulator HTH, LysR EP560_07975 IPR036291 NAD(P)-binding domain superfamily EP560_07975 IPR001509 NAD-dependent epimerase/dehydratase EP560_07980 IPR011701 Major facilitator superfamily EP560_07980 IPR020846 Major facilitator superfamily domain EP560_07980 IPR036259 MFS transporter superfamily EP560_07985 IPR013328 6-phosphogluconate dehydrogenase, domain 2 EP560_07985 IPR006398 2-hydroxy-3-oxopropionate reductase EP560_07985 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain EP560_07985 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding EP560_07985 IPR036291 NAD(P)-binding domain superfamily EP560_07985 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP560_07985 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site EP560_07985 IPR015815 3-hydroxyisobutyrate dehydrogenase-related EP560_07990 IPR009057 Homeobox-like domain superfamily EP560_07990 IPR018060 DNA binding HTH domain, AraC-type EP560_07990 IPR009594 Transcription regulator HTH, AraC, N-terminal EP560_08005 IPR020843 Polyketide synthase, enoylreductase domain EP560_08005 IPR013154 Alcohol dehydrogenase, N-terminal EP560_08005 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site EP560_08005 IPR011032 GroES-like superfamily EP560_08005 IPR036291 NAD(P)-binding domain superfamily EP560_08005 IPR013149 Alcohol dehydrogenase, C-terminal EP560_08020 IPR017871 ABC transporter, conserved site EP560_08020 IPR003439 ABC transporter-like EP560_08020 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_08020 IPR003593 AAA+ ATPase domain EP560_08040 IPR029057 Phosphoribosyltransferase-like EP560_08040 IPR000836 Phosphoribosyltransferase domain EP560_08040 IPR005946 Ribose-phosphate pyrophosphokinase EP560_08040 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain EP560_08040 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type EP560_08040 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site EP560_08045 IPR016471 Nicotinamide phosphoribosyl transferase EP560_08045 IPR013785 Aldolase-type TIM barrel EP560_08045 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase EP560_08045 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal EP560_08120 IPR016032 Signal transduction response regulator, C-terminal effector EP560_08120 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_08120 IPR000792 Transcription regulator LuxR, C-terminal EP560_08125 IPR000120 Amidase EP560_08125 IPR020556 Amidase, conserved site EP560_08125 IPR036928 Amidase signature (AS) superfamily EP560_08125 IPR023631 Amidase signature domain EP560_08130 IPR039562 Membrane fusion protein, biotin-lipoyl like domain EP560_08135 IPR020846 Major facilitator superfamily domain EP560_08135 IPR011701 Major facilitator superfamily EP560_08135 IPR036259 MFS transporter superfamily EP560_08135 IPR004638 Drug resistance transporter EmrB-like EP560_08160 IPR002828 Survival protein SurE-like phosphatase/nucleotidase EP560_08160 IPR030048 Survival protein SurE EP560_08160 IPR036523 SurE-like phosphatase/nucleotidase superfamily EP560_08170 IPR002912 ACT domain EP560_08170 IPR033655 RelA, TGS domain EP560_08170 IPR003607 HD/PDEase domain EP560_08170 IPR004811 RelA/SpoT family EP560_08170 IPR007685 RelA/SpoT EP560_08170 IPR004095 TGS EP560_08170 IPR012676 TGS-like EP560_08170 IPR012675 Beta-grasp domain superfamily EP560_08215 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_08215 IPR036291 NAD(P)-binding domain superfamily EP560_08215 IPR023985 Mycofactocin-dependent oxidoreductase EP560_08215 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_08220 IPR036291 NAD(P)-binding domain superfamily EP560_08220 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_08225 IPR029058 Alpha/Beta hydrolase fold EP560_08225 IPR022742 Serine aminopeptidase, S33 EP560_08230 IPR018062 HTH domain AraC-type, conserved site EP560_08230 IPR037923 Transcription regulator HTH-like EP560_08230 IPR018060 DNA binding HTH domain, AraC-type EP560_08230 IPR009057 Homeobox-like domain superfamily EP560_08230 IPR003313 AraC-type arabinose-binding/dimerisation domain EP560_08230 IPR020449 Transcription regulator HTH, AraC- type EP560_08235 IPR038404 TRAP transporter solute receptor DctP superfamily EP560_08245 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_08245 IPR001867 OmpR/PhoB-type DNA-binding domain EP560_08245 IPR011006 CheY-like superfamily EP560_08245 IPR039420 Transcriptional regulatory protein WalR-like EP560_08245 IPR001789 Signal transduction response regulator, receiver domain EP560_08250 IPR006143 RND efflux pump, membrane fusion protein EP560_08250 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain EP560_08255 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 EP560_08255 IPR001036 Acriflavin resistance protein EP560_08255 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains EP560_08260 IPR003423 Outer membrane efflux protein EP560_08260 IPR010131 RND efflux system, outer membrane lipoprotein, NodT EP560_08265 IPR029058 Alpha/Beta hydrolase fold EP560_08265 IPR022742 Serine aminopeptidase, S33 EP560_08270 IPR020946 Flavin monooxygenase-like EP560_08270 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_08275 IPR001613 Flavin amine oxidase EP560_08275 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_08275 IPR002937 Amine oxidase EP560_08290 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_08290 IPR006076 FAD dependent oxidoreductase EP560_08310 IPR036937 Fimbrial-type adhesion domain superfamily EP560_08310 IPR008966 Adhesion domain superfamily EP560_08310 IPR039458 FimA-like EP560_08315 IPR008962 PapD-like superfamily EP560_08315 IPR016147 Pili assembly chaperone, N-terminal EP560_08315 IPR016148 Pili assembly chaperone, C-terminal EP560_08315 IPR001829 Pili assembly chaperone, bacterial EP560_08315 IPR013783 Immunoglobulin-like fold EP560_08315 IPR036316 Pili assembly chaperone, C-terminal domain superfamily EP560_08315 IPR018046 Pili assembly chaperone, conserved site EP560_08320 IPR018030 Fimbrial membrane usher, conserved site EP560_08320 IPR025885 PapC, N-terminal domain EP560_08320 IPR000015 Outer membrane usher protein EP560_08320 IPR042186 Outer membrane usher protein FimD, plug domain EP560_08320 IPR025949 PapC-like, C-terminal domain EP560_08320 IPR037224 PapC, N-terminal domain superfamily EP560_08325 IPR000259 Fimbrial-type adhesion domain EP560_08325 IPR036937 Fimbrial-type adhesion domain superfamily EP560_08325 IPR008966 Adhesion domain superfamily EP560_08335 IPR011032 GroES-like superfamily EP560_08335 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site EP560_08335 IPR020843 Polyketide synthase, enoylreductase domain EP560_08335 IPR036291 NAD(P)-binding domain superfamily EP560_08335 IPR013154 Alcohol dehydrogenase, N-terminal EP560_08335 IPR013149 Alcohol dehydrogenase, C-terminal EP560_08335 IPR014183 Alcohol dehydrogenase class III EP560_08345 IPR020835 Catalase superfamily EP560_08345 IPR011614 Catalase core domain EP560_08350 IPR001584 Integrase, catalytic core EP560_08350 IPR001598 Transposase, IS30, conserved site EP560_08350 IPR012337 Ribonuclease H-like superfamily EP560_08350 IPR025246 Transposase IS30-like HTH domain EP560_08350 IPR036397 Ribonuclease H superfamily EP560_08365 IPR030871 Cardiolipin synthase C EP560_08365 IPR025202 Phospholipase D-like domain EP560_08365 IPR001736 Phospholipase D/Transphosphatidylase EP560_08395 IPR032466 Metal-dependent hydrolase EP560_08395 IPR008257 Peptidase M19 EP560_08395 IPR000180 Membrane dipeptidase, active site EP560_08400 IPR023885 4Fe4S-binding SPASM domain EP560_08400 IPR013785 Aldolase-type TIM barrel EP560_08400 IPR006638 Elp3/MiaB/NifB EP560_08400 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site EP560_08400 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria EP560_08400 IPR017200 Coenzyme PQQ synthesis protein E EP560_08400 IPR007197 Radical SAM EP560_08405 IPR008792 Coenzyme PQQ synthesis protein D EP560_08405 IPR022479 Coenzyme PQQ synthesis D, bacteria EP560_08405 IPR041881 Coenzyme PQQ synthesis protein D superfamily EP560_08410 IPR039068 Pyrroloquinoline-quinone synthase-like EP560_08410 IPR011845 Coenzyme PQQ biosynthesis protein C EP560_08410 IPR004305 Thiaminase-2/PQQC EP560_08410 IPR016084 Haem oxygenase-like, multi-helical EP560_08415 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP560_08415 IPR011842 Coenzyme PQQ biosynthesis protein B EP560_08415 IPR001279 Metallo-beta-lactamase EP560_08420 IPR011725 Coenzyme PQQ biosynthesis protein A EP560_08425 IPR024953 Polyphosphate kinase middle domain EP560_08425 IPR036832 Polyphosphate kinase N-terminal domain superfamily EP560_08425 IPR025198 Polyphosphate kinase N-terminal domain EP560_08425 IPR036830 Polyphosphate kinase middle domain superfamily EP560_08425 IPR041108 Polyphosphate kinase, C-terminal domain 1 EP560_08425 IPR003414 Polyphosphate kinase EP560_08425 IPR025200 Polyphosphate kinase C-terminal domain 2 EP560_08430 IPR006179 5'-Nucleotidase/apyrase EP560_08430 IPR029052 Metallo-dependent phosphatase-like EP560_08430 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type EP560_08440 IPR036736 ACP-like superfamily EP560_08440 IPR016291 Isochorismatase EP560_08440 IPR000868 Isochorismatase-like EP560_08440 IPR036380 Isochorismatase-like superfamily EP560_08440 IPR009081 Phosphopantetheine binding ACP domain EP560_08445 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_08445 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_08445 IPR036291 NAD(P)-binding domain superfamily EP560_08445 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase EP560_08450 IPR015852 ABC transporter, molybdenum import, ModC EP560_08450 IPR003439 ABC transporter-like EP560_08450 IPR003593 AAA+ ATPase domain EP560_08450 IPR008995 Molybdate/tungstate binding, C-terminal EP560_08450 IPR011868 Molybdate ABC transporter, ATP-binding protein EP560_08450 IPR004606 Molybdenum-pterin binding EP560_08450 IPR017871 ABC transporter, conserved site EP560_08450 IPR005116 Transport-associated OB, type 1 EP560_08450 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_08455 IPR011867 Molybdate ABC transporter, permease protein EP560_08455 IPR035906 MetI-like superfamily EP560_08455 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_08460 IPR005950 Molybdate ABC transporter, substrate-binding protein EP560_08465 IPR008995 Molybdate/tungstate binding, C-terminal EP560_08465 IPR005116 Transport-associated OB, type 1 EP560_08465 IPR036390 Winged helix DNA-binding domain superfamily EP560_08465 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_08465 IPR000847 Transcription regulator HTH, LysR EP560_08465 IPR003725 Molybdenum-binding protein ModE, N-terminal EP560_08465 IPR004606 Molybdenum-pterin binding EP560_08465 IPR016462 Molybdate-dependent transcriptional regulator ModE EP560_08470 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP560_08470 IPR017638 Anthranilate 1,2-dioxygenase, large subunit EP560_08470 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit EP560_08470 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain EP560_08470 IPR017941 Rieske [2Fe-2S] iron-sulphur domain EP560_08470 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site EP560_08475 IPR000391 Ring-hydroxylating dioxygenase beta subunit EP560_08475 IPR032710 NTF2-like domain superfamily EP560_08475 IPR017640 Anthranilate 1,2-dioxygenase, small subunit EP560_08480 IPR036010 2Fe-2S ferredoxin-like superfamily EP560_08480 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP560_08480 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site EP560_08480 IPR012675 Beta-grasp domain superfamily EP560_08480 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain EP560_08480 IPR017927 FAD-binding domain, ferredoxin reductase-type EP560_08480 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP560_08480 IPR017938 Riboflavin synthase-like beta-barrel EP560_08480 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP560_08495 IPR002563 Flavin reductase like domain EP560_08495 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_08495 IPR036390 Winged helix DNA-binding domain superfamily EP560_08495 IPR012349 FMN-binding split barrel EP560_08505 IPR036291 NAD(P)-binding domain superfamily EP560_08505 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_08505 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_08510 IPR002925 Dienelactone hydrolase EP560_08510 IPR029058 Alpha/Beta hydrolase fold EP560_08515 IPR011701 Major facilitator superfamily EP560_08515 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family EP560_08515 IPR020846 Major facilitator superfamily domain EP560_08515 IPR036259 MFS transporter superfamily EP560_08515 IPR005829 Sugar transporter, conserved site EP560_08520 IPR018060 DNA binding HTH domain, AraC-type EP560_08520 IPR009057 Homeobox-like domain superfamily EP560_08520 IPR009594 Transcription regulator HTH, AraC, N-terminal EP560_08525 IPR036291 NAD(P)-binding domain superfamily EP560_08525 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_08525 IPR011294 3-hydroxybutyrate dehydrogenase EP560_08525 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_08530 IPR003474 Gluconate transporter EP560_08540 IPR005119 LysR, substrate-binding EP560_08540 IPR000847 Transcription regulator HTH, LysR EP560_08540 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_08540 IPR036390 Winged helix DNA-binding domain superfamily EP560_08545 IPR012792 3-oxoacid CoA-transferase, subunit A EP560_08545 IPR037171 NagB/RpiA transferase-like EP560_08545 IPR004163 Coenzyme A transferase binding site EP560_08545 IPR004165 Coenzyme A transferase family I EP560_08550 IPR012791 3-oxoacid CoA-transferase, subunit B EP560_08550 IPR037171 NagB/RpiA transferase-like EP560_08550 IPR004164 Coenzyme A transferase active site EP560_08550 IPR004165 Coenzyme A transferase family I EP560_08555 IPR006161 Conserved hypothetical protein CHP00336 EP560_08555 IPR006160 Short chain fatty acid transporter AtoE EP560_08560 IPR020610 Thiolase, active site EP560_08560 IPR020617 Thiolase, C-terminal EP560_08560 IPR020613 Thiolase, conserved site EP560_08560 IPR020616 Thiolase, N-terminal EP560_08560 IPR016039 Thiolase-like EP560_08560 IPR002155 Thiolase EP560_08560 IPR020615 Thiolase, acyl-enzyme intermediate active site EP560_08565 IPR036390 Winged helix DNA-binding domain superfamily EP560_08565 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_08565 IPR000847 Transcription regulator HTH, LysR EP560_08565 IPR005119 LysR, substrate-binding EP560_08570 IPR000847 Transcription regulator HTH, LysR EP560_08570 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_08570 IPR036390 Winged helix DNA-binding domain superfamily EP560_08570 IPR005119 LysR, substrate-binding EP560_08585 IPR008948 L-Aspartase-like EP560_08585 IPR022761 Fumarate lyase, N-terminal EP560_08585 IPR000362 Fumarate lyase family EP560_08585 IPR020557 Fumarate lyase, conserved site EP560_08585 IPR018951 Fumarase C, C-terminal EP560_08585 IPR024083 Fumarase/histidase, N-terminal EP560_08585 IPR004708 Aspartate ammonia-lyase EP560_08590 IPR039423 TonB-dependent receptor-like EP560_08590 IPR030149 TonB-dependent siderophore receptor FcuA/FatA EP560_08590 IPR012910 TonB-dependent receptor, plug domain EP560_08590 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_08590 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_08590 IPR010916 TonB box, conserved site EP560_08590 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP560_08590 IPR010917 TonB-dependent receptor, conserved site EP560_08590 IPR010105 TonB-dependent siderophore receptor EP560_08595 IPR020846 Major facilitator superfamily domain EP560_08595 IPR005829 Sugar transporter, conserved site EP560_08595 IPR004736 MFS transporter, metabolite:H symporter EP560_08595 IPR036259 MFS transporter superfamily EP560_08595 IPR005828 Major facilitator, sugar transporter-like EP560_08610 IPR003439 ABC transporter-like EP560_08610 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_08610 IPR015859 ABC transporter, taurine import, TauD EP560_08610 IPR017871 ABC transporter, conserved site EP560_08610 IPR003593 AAA+ ATPase domain EP560_08615 IPR035906 MetI-like superfamily EP560_08615 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_08620 IPR010068 Taurine ABC transporter, substrate-binding protein TauA EP560_08620 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain EP560_08620 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP560_08645 IPR023048 NADH-azoreductase, FMN-dependent EP560_08645 IPR029039 Flavoprotein-like superfamily EP560_08645 IPR003680 Flavodoxin-like fold EP560_08650 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_08650 IPR002577 Helix-turn-helix, HxlR type EP560_08650 IPR036390 Winged helix DNA-binding domain superfamily EP560_08655 IPR011256 Regulatory factor, effector binding domain superfamily EP560_08655 IPR020449 Transcription regulator HTH, AraC- type EP560_08655 IPR018062 HTH domain AraC-type, conserved site EP560_08655 IPR018060 DNA binding HTH domain, AraC-type EP560_08655 IPR010499 Bacterial transcription activator, effector binding EP560_08655 IPR009057 Homeobox-like domain superfamily EP560_08655 IPR029442 GyrI-like small molecule binding domain EP560_08670 IPR002781 Transmembrane protein TauE-like EP560_08675 IPR005939 Beta-lactamase hydrolase-like EP560_08675 IPR029021 Protein-tyrosine phosphatase-like EP560_08675 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP560_08675 IPR001279 Metallo-beta-lactamase EP560_08680 IPR005939 Beta-lactamase hydrolase-like EP560_08680 IPR001279 Metallo-beta-lactamase EP560_08680 IPR029021 Protein-tyrosine phosphatase-like EP560_08680 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP560_08685 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 EP560_08685 IPR009057 Homeobox-like domain superfamily EP560_08685 IPR011006 CheY-like superfamily EP560_08685 IPR001789 Signal transduction response regulator, receiver domain EP560_08685 IPR002078 RNA polymerase sigma factor 54 interaction domain EP560_08685 IPR002197 DNA binding HTH domain, Fis-type EP560_08685 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_08685 IPR003593 AAA+ ATPase domain EP560_08685 IPR010114 DNA-binding transcriptional regulator NtrC EP560_08685 IPR025944 Sigma-54 interaction domain, conserved site EP560_08690 IPR021134 Bestrophin/UPF0187 EP560_08695 IPR013149 Alcohol dehydrogenase, C-terminal EP560_08695 IPR013154 Alcohol dehydrogenase, N-terminal EP560_08695 IPR011032 GroES-like superfamily EP560_08695 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site EP560_08695 IPR036291 NAD(P)-binding domain superfamily EP560_08695 IPR020843 Polyketide synthase, enoylreductase domain EP560_08700 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_08700 IPR036291 NAD(P)-binding domain superfamily EP560_08700 IPR014007 Acetoin reductase EP560_08700 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_08705 IPR023753 FAD/NAD(P)-binding domain EP560_08705 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily EP560_08705 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site EP560_08705 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EP560_08705 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I EP560_08705 IPR006258 Dihydrolipoamide dehydrogenase EP560_08705 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_08710 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily EP560_08710 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex EP560_08710 IPR036625 E3-binding domain superfamily EP560_08710 IPR004167 Peripheral subunit-binding domain EP560_08710 IPR011053 Single hybrid motif EP560_08710 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain EP560_08710 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site EP560_08710 IPR000089 Biotin/lipoyl attachment EP560_08715 IPR029061 Thiamin diphosphate-binding fold EP560_08715 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II EP560_08715 IPR005475 Transketolase-like, pyrimidine-binding domain EP560_08715 IPR033248 Transketolase, C-terminal domain EP560_08720 IPR029061 Thiamin diphosphate-binding fold EP560_08720 IPR001017 Dehydrogenase, E1 component EP560_08725 IPR003698 Lipoyl synthase EP560_08725 IPR006638 Elp3/MiaB/NifB EP560_08725 IPR013785 Aldolase-type TIM barrel EP560_08725 IPR007197 Radical SAM EP560_08745 IPR000453 Chorismate synthase EP560_08745 IPR035904 Chorismate synthase AroC superfamily EP560_08745 IPR020541 Chorismate synthase, conserved site EP560_08750 IPR004556 Methyltransferase HemK-like EP560_08750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_08750 IPR007848 Methyltransferase small domain EP560_08750 IPR002052 DNA methylase, N-6 adenine-specific, conserved site EP560_08750 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase EP560_08755 IPR006653 Tryptophan synthase, beta chain, conserved site EP560_08755 IPR006654 Tryptophan synthase, beta chain EP560_08755 IPR023026 Tryptophan synthase beta chain/beta chain-like EP560_08755 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP560_08755 IPR001926 Pyridoxal-phosphate dependent enzyme EP560_08765 IPR003593 AAA+ ATPase domain EP560_08765 IPR037219 Peptidase M41-like EP560_08765 IPR000642 Peptidase M41 EP560_08765 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_08765 IPR005936 Peptidase, FtsH EP560_08765 IPR003959 ATPase, AAA-type, core EP560_08765 IPR041569 AAA ATPase, AAA+ lid domain EP560_08775 IPR038068 YcgL-like superfamily EP560_08775 IPR027354 YcgL domain EP560_08795 IPR002121 HRDC domain EP560_08795 IPR012337 Ribonuclease H-like superfamily EP560_08795 IPR036397 Ribonuclease H superfamily EP560_08795 IPR010997 HRDC-like superfamily EP560_08795 IPR002562 3'-5' exonuclease domain EP560_08795 IPR006292 Ribonuclease D EP560_08800 IPR034137 RecR, TOPRIM domain EP560_08800 IPR006171 TOPRIM domain EP560_08800 IPR015967 Recombination protein RecR, conserved site EP560_08800 IPR023627 Recombination protein RecR EP560_08800 IPR000093 DNA recombination protein RecR EP560_08800 IPR023628 Recombination protein RecR, C4-type zinc finger EP560_08805 IPR004401 Nucleoid-associated protein YbaB/EbfC family EP560_08805 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily EP560_08815 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_08815 IPR006234 O-succinylhomoserine sulfhydrylase EP560_08815 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme EP560_08815 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_08815 IPR015424 Pyridoxal phosphate-dependent transferase EP560_08820 IPR000073 Alpha/beta hydrolase fold-1 EP560_08820 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit EP560_08820 IPR029058 Alpha/Beta hydrolase fold EP560_08825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_08825 IPR013216 Methyltransferase type 11 EP560_08855 IPR036265 HIT-like superfamily EP560_08855 IPR001310 Histidine triad (HIT) protein EP560_08855 IPR011146 HIT-like domain EP560_08855 IPR019808 Histidine triad, conserved site EP560_08855 IPR039384 HINT family EP560_08880 IPR000412 ABC-2 transporter EP560_08885 IPR000412 ABC-2 transporter EP560_08890 IPR017871 ABC transporter, conserved site EP560_08890 IPR003593 AAA+ ATPase domain EP560_08890 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_08890 IPR003439 ABC transporter-like EP560_08895 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain EP560_08915 IPR039552 Transposase IS66, C-terminal EP560_08915 IPR004291 Transposase, IS66 EP560_08915 IPR024474 Zinc-finger binding domain of transposase IS66 EP560_08915 IPR024463 Transposase TnpC, homeodomain EP560_08925 IPR003835 Glycosyl transferase, family 19 EP560_08930 IPR010916 TonB box, conserved site EP560_08930 IPR010105 TonB-dependent siderophore receptor EP560_08930 IPR010917 TonB-dependent receptor, conserved site EP560_08930 IPR012910 TonB-dependent receptor, plug domain EP560_08930 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP560_08930 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_08930 IPR039423 TonB-dependent receptor-like EP560_08930 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_08950 IPR002781 Transmembrane protein TauE-like EP560_08955 IPR006218 DAHP synthetase I/KDSA EP560_08955 IPR006219 DHAP synthase, class 1 EP560_08955 IPR013785 Aldolase-type TIM barrel EP560_08960 IPR003805 Adenosylcobinamide-GDP ribazoletransferase EP560_08975 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal EP560_08975 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like EP560_08975 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily EP560_08975 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic EP560_08980 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_08980 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase EP560_09020 IPR010917 TonB-dependent receptor, conserved site EP560_09020 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP560_09020 IPR010916 TonB box, conserved site EP560_09020 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_09020 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_09020 IPR039426 Vitamin B12 transporter BtuB-like EP560_09020 IPR010105 TonB-dependent siderophore receptor EP560_09020 IPR012910 TonB-dependent receptor, plug domain EP560_09035 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal EP560_09035 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like EP560_09035 IPR022770 Ferric iron reductase FhuF domain EP560_09040 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal EP560_09040 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like EP560_09040 IPR022770 Ferric iron reductase FhuF domain EP560_09045 IPR004638 Drug resistance transporter EmrB-like EP560_09045 IPR011701 Major facilitator superfamily EP560_09045 IPR036259 MFS transporter superfamily EP560_09045 IPR020846 Major facilitator superfamily domain EP560_09050 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_09050 IPR031043 Putative histamine N-monooxygenase EP560_09050 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase EP560_09055 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal EP560_09055 IPR022770 Ferric iron reductase FhuF domain EP560_09055 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like EP560_09060 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain EP560_09060 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC EP560_09060 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily EP560_09070 IPR004147 UbiB domain EP560_09070 IPR011009 Protein kinase-like domain superfamily EP560_09075 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_09075 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_09075 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_09075 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_09075 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_09075 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_09075 IPR006089 Acyl-CoA dehydrogenase, conserved site EP560_09080 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_09080 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_09080 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_09080 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_09080 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_09080 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_09080 IPR006089 Acyl-CoA dehydrogenase, conserved site EP560_09085 IPR033885 Alkane/xylene monooxygenase EP560_09085 IPR005804 Fatty acid desaturase domain EP560_09090 IPR020449 Transcription regulator HTH, AraC- type EP560_09090 IPR011051 RmlC-like cupin domain superfamily EP560_09090 IPR014710 RmlC-like jelly roll fold EP560_09090 IPR018062 HTH domain AraC-type, conserved site EP560_09090 IPR018060 DNA binding HTH domain, AraC-type EP560_09090 IPR009057 Homeobox-like domain superfamily EP560_09090 IPR032783 AraC-type transcription regulator, ligand-binding domain EP560_09095 IPR027304 Trigger factor/SurA domain superfamily EP560_09095 IPR015391 SurA N-terminal EP560_09095 IPR023034 Peptidyl-prolyl isomerase SurA EP560_09095 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site EP560_09095 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type EP560_09100 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily EP560_09100 IPR000119 Histone-like DNA-binding protein EP560_09100 IPR020816 Histone-like DNA-binding protein, conserved site EP560_09115 IPR036390 Winged helix DNA-binding domain superfamily EP560_09115 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_09115 IPR000944 Transcription regulator Rrf2-type EP560_09115 IPR030489 Transcription regulator Rrf2-type, conserved site EP560_09115 IPR010242 Transcription factor HTH, IscR EP560_09120 IPR000192 Aminotransferase class V domain EP560_09120 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site EP560_09120 IPR010240 Cysteine desulfurase IscS EP560_09120 IPR016454 Cysteine desulfurase EP560_09120 IPR015424 Pyridoxal phosphate-dependent transferase EP560_09120 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_09120 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_09125 IPR011339 ISC system FeS cluster assembly, IscU scaffold EP560_09125 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal EP560_09130 IPR016092 FeS cluster insertion protein EP560_09130 IPR000361 FeS cluster biogenesis EP560_09130 IPR011302 Iron-binding protein IscA, proteobacteria EP560_09130 IPR035903 HesB-like domain superfamily EP560_09130 IPR017870 FeS cluster insertion, C-terminal, conserved site EP560_09135 IPR036869 Chaperone J-domain superfamily EP560_09135 IPR001623 DnaJ domain EP560_09135 IPR004640 Co-chaperone Hsc20 EP560_09135 IPR036386 HscB, C-terminal domain superfamily EP560_09135 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain EP560_09140 IPR010236 ISC system FeS cluster assembly, HscA chaperone EP560_09140 IPR042039 HscA chaperone, nucleotide-binding domain EP560_09140 IPR013126 Heat shock protein 70 family EP560_09140 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily EP560_09140 IPR018181 Heat shock protein 70, conserved site EP560_09140 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily EP560_09145 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria EP560_09145 IPR036010 2Fe-2S ferredoxin-like superfamily EP560_09145 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP560_09145 IPR001055 Adrenodoxin EP560_09145 IPR018298 Adrenodoxin, iron-sulphur binding site EP560_09145 IPR012675 Beta-grasp domain superfamily EP560_09150 IPR029787 Nucleotide cyclase EP560_09150 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase EP560_09160 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_09160 IPR041471 UvrB, interaction domain EP560_09160 IPR005118 Transcription-repair-coupling factor, C-terminal domain EP560_09160 IPR037235 TRCF-like, C-terminal domain EP560_09160 IPR004576 Transcription-repair coupling factor EP560_09160 IPR003711 CarD-like/TRCF domain EP560_09160 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP560_09160 IPR011545 DEAD/DEAH box helicase domain EP560_09160 IPR036101 CarD-like/TRCF domain superfamily EP560_09160 IPR001650 Helicase, C-terminal EP560_09180 IPR010203 Regulator of ribonuclease activity A EP560_09180 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein EP560_09180 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily EP560_09185 IPR016040 NAD(P)-binding domain EP560_09185 IPR036291 NAD(P)-binding domain superfamily EP560_09185 IPR000534 Semialdehyde dehydrogenase, NAD-binding EP560_09190 IPR036510 Ribosomal protein S20 superfamily EP560_09190 IPR002583 Ribosomal protein S20 EP560_09200 IPR020550 Inositol monophosphatase, conserved site EP560_09200 IPR000760 Inositol monophosphatase-like EP560_09200 IPR020583 Inositol monophosphatase, metal-binding site EP560_09200 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ EP560_09215 IPR003593 AAA+ ATPase domain EP560_09215 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_09215 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal EP560_09215 IPR017871 ABC transporter, conserved site EP560_09215 IPR003439 ABC transporter-like EP560_09220 IPR035906 MetI-like superfamily EP560_09220 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_09225 IPR035906 MetI-like superfamily EP560_09225 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_09230 IPR001567 Peptidase M3A/M3B catalytic domain EP560_09230 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 EP560_09250 IPR039426 Vitamin B12 transporter BtuB-like EP560_09250 IPR012910 TonB-dependent receptor, plug domain EP560_09250 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_09250 IPR010917 TonB-dependent receptor, conserved site EP560_09250 IPR010101 TonB-dependent vitamin B12 transporter BtuB EP560_09250 IPR010916 TonB box, conserved site EP560_09250 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP560_09250 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_09260 IPR002898 MotA/TolQ/ExbB proton channel EP560_09265 IPR003400 Biopolymer transport protein ExbD/TolR EP560_09270 IPR003400 Biopolymer transport protein ExbD/TolR EP560_09280 IPR011076 Malate synthase-like superfamily EP560_09280 IPR001465 Malate synthase EP560_09280 IPR006253 Malate synthase G EP560_09280 IPR023310 Malate synthase G, beta sub-domain EP560_09335 IPR000189 Prokaryotic transglycosylase, active site EP560_09335 IPR008258 Transglycosylase SLT domain 1 EP560_09335 IPR010090 Phage tail tape measure protein EP560_09335 IPR016047 Peptidase M23 EP560_09335 IPR023346 Lysozyme-like domain superfamily EP560_09335 IPR011055 Duplicated hybrid motif EP560_09390 IPR006944 Bacteriophage/Gene transfer agent portal protein EP560_09465 IPR007693 DNA helicase, DnaB-like, N-terminal EP560_09465 IPR003593 AAA+ ATPase domain EP560_09465 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily EP560_09465 IPR007692 DNA helicase, DnaB type EP560_09465 IPR007694 DNA helicase, DnaB-like, C-terminal EP560_09465 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal EP560_09465 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_09530 IPR004107 Integrase, SAM-like, N-terminal EP560_09530 IPR010998 Integrase/recombinase, N-terminal EP560_09530 IPR002104 Integrase, catalytic domain EP560_09530 IPR013762 Integrase-like, catalytic domain superfamily EP560_09530 IPR011010 DNA breaking-rejoining enzyme, catalytic core EP560_09530 IPR011931 Tyrosine recombinase XerC EP560_09530 IPR023009 Tyrosine recombinase XerC/XerD EP560_09535 IPR030870 Cell division protein ZapE EP560_09535 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_09535 IPR005654 ATPase, AFG1-like EP560_09545 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_09545 IPR020946 Flavin monooxygenase-like EP560_09555 IPR013785 Aldolase-type TIM barrel EP560_09555 IPR014732 Orotidine 5'-phosphate decarboxylase EP560_09555 IPR001754 Orotidine 5'-phosphate decarboxylase domain EP560_09555 IPR011060 Ribulose-phosphate binding barrel EP560_09555 IPR018089 Orotidine 5'-phosphate decarboxylase, active site EP560_09565 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily EP560_09565 IPR000119 Histone-like DNA-binding protein EP560_09565 IPR020816 Histone-like DNA-binding protein, conserved site EP560_09565 IPR005685 Integration host factor, beta subunit EP560_09570 IPR003029 S1 domain EP560_09570 IPR022967 RNA-binding domain, S1 EP560_09570 IPR000110 Ribosomal protein S1 EP560_09570 IPR012340 Nucleic acid-binding, OB-fold EP560_09575 IPR003136 Cytidylate kinase EP560_09575 IPR011994 Cytidylate kinase domain EP560_09575 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_09585 IPR002125 Cytidine and deoxycytidylate deaminase domain EP560_09585 IPR028883 tRNA-specific adenosine deaminase EP560_09585 IPR016193 Cytidine deaminase-like EP560_09585 IPR016192 APOBEC/CMP deaminase, zinc-binding EP560_09595 IPR036895 Uracil-DNA glycosylase-like domain superfamily EP560_09595 IPR018085 Uracil-DNA glycosylase, active site EP560_09595 IPR002043 Uracil-DNA glycosylase family 1 EP560_09595 IPR005122 Uracil-DNA glycosylase-like EP560_09605 IPR005628 General secretion pathway protein K EP560_09605 IPR038072 GspK, central domain superfamily EP560_09610 IPR010055 Type II secretion system protein J EP560_09610 IPR012902 Prokaryotic N-terminal methylation site EP560_09615 IPR010052 Type II secretion system protein I EP560_09615 IPR003413 Type II secretion system protein I domain EP560_09615 IPR012902 Prokaryotic N-terminal methylation site EP560_09630 IPR032466 Metal-dependent hydrolase EP560_09630 IPR015991 Uncharacterised hydrolase TatD-type EP560_09630 IPR001130 TatD family EP560_09630 IPR018228 Deoxyribonuclease, TatD-related, conserved site EP560_09640 IPR004622 DNA polymerase III, delta prime subunit EP560_09640 IPR015199 DNA polymerase III, delta subunit, C-terminal EP560_09640 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_09645 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase EP560_09645 IPR003329 Acylneuraminate cytidylyltransferase EP560_09645 IPR029044 Nucleotide-diphospho-sugar transferases EP560_09650 IPR003758 Tetraacyldisaccharide 4'-kinase EP560_09650 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_09655 IPR003593 AAA+ ATPase domain EP560_09655 IPR017871 ABC transporter, conserved site EP560_09655 IPR011527 ABC transporter type 1, transmembrane domain EP560_09655 IPR036640 ABC transporter type 1, transmembrane domain superfamily EP560_09655 IPR003439 ABC transporter-like EP560_09655 IPR011917 ABC transporter, lipid A export, MsbA EP560_09655 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_09655 IPR039421 Type I protein exporter EP560_09665 IPR002898 MotA/TolQ/ExbB proton channel EP560_09670 IPR004437 ParB/RepB/Spo0J partition protein EP560_09670 IPR041468 ParB/Spo0J, HTH domain EP560_09670 IPR036086 ParB/Sulfiredoxin superfamily EP560_09670 IPR003115 ParB/Sulfiredoxin EP560_09675 IPR025669 AAA domain EP560_09675 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_09680 IPR003682 rRNA small subunit methyltransferase G EP560_09680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_09685 IPR029044 Nucleotide-diphospho-sugar transferases EP560_09685 IPR005835 Nucleotidyl transferase domain EP560_09690 IPR011009 Protein kinase-like domain superfamily EP560_09690 IPR002575 Aminoglycoside phosphotransferase EP560_09695 IPR007543 LptD, C-terminal EP560_09695 IPR020889 LPS-assembly protein LptD EP560_09695 IPR005653 Organic solvent tolerance-like, N-terminal EP560_09700 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type EP560_09700 IPR027304 Trigger factor/SurA domain superfamily EP560_09700 IPR015391 SurA N-terminal EP560_09700 IPR023034 Peptidyl-prolyl isomerase SurA EP560_09705 IPR013785 Aldolase-type TIM barrel EP560_09705 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype EP560_09705 IPR000771 Fructose-bisphosphate aldolase, class-II EP560_09715 IPR001576 Phosphoglycerate kinase EP560_09715 IPR036043 Phosphoglycerate kinase superfamily EP560_09715 IPR015911 Phosphoglycerate kinase, conserved site EP560_09715 IPR015824 Phosphoglycerate kinase, N-terminal EP560_09725 IPR029001 Inosine triphosphate pyrophosphatase-like EP560_09725 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein EP560_09730 IPR039994 JmjC domain-containing EP560_09730 IPR003347 JmjC domain EP560_09740 IPR001845 HTH ArsR-type DNA-binding domain EP560_09740 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_09740 IPR011991 ArsR-like helix-turn-helix domain EP560_09740 IPR036390 Winged helix DNA-binding domain superfamily EP560_09745 IPR036458 Sodium:dicarboxylate symporter superfamily EP560_09745 IPR001991 Sodium:dicarboxylate symporter EP560_09745 IPR023025 Serine/threonine transporter SstT EP560_09750 IPR010699 Protein of unknown function DUF1275 EP560_09755 IPR018636 Protein of unknown function DUF2058 EP560_09760 IPR011527 ABC transporter type 1, transmembrane domain EP560_09760 IPR036640 ABC transporter type 1, transmembrane domain superfamily EP560_09760 IPR003439 ABC transporter-like EP560_09760 IPR039421 Type I protein exporter EP560_09760 IPR017871 ABC transporter, conserved site EP560_09760 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_09760 IPR003593 AAA+ ATPase domain EP560_09770 IPR020449 Transcription regulator HTH, AraC- type EP560_09770 IPR018060 DNA binding HTH domain, AraC-type EP560_09770 IPR009057 Homeobox-like domain superfamily EP560_09770 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal EP560_09775 IPR000089 Biotin/lipoyl attachment EP560_09775 IPR011053 Single hybrid motif EP560_09775 IPR017453 Glycine cleavage system H-protein, subgroup EP560_09775 IPR033753 Glycine cleavage system H-protein/Simiate EP560_09775 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site EP560_09775 IPR002930 Glycine cleavage system H-protein EP560_09780 IPR027546 Sirtuin, class III EP560_09780 IPR026590 Sirtuin family, catalytic core domain EP560_09780 IPR026591 Sirtuin, catalytic core small domain superfamily EP560_09780 IPR003000 Sirtuin family EP560_09780 IPR029035 DHS-like NAD/FAD-binding domain superfamily EP560_09785 IPR018212 Sodium/solute symporter, conserved site EP560_09785 IPR001734 Sodium/solute symporter EP560_09785 IPR038377 Sodium/glucose symporter superfamily EP560_09785 IPR011851 Sodium/proline symporter EP560_09790 IPR011991 ArsR-like helix-turn-helix domain EP560_09790 IPR000485 AsnC-type HTH domain EP560_09790 IPR011008 Dimeric alpha-beta barrel EP560_09790 IPR019888 Transcription regulator AsnC-type EP560_09790 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP560_09790 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP560_09790 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_09790 IPR036390 Winged helix DNA-binding domain superfamily EP560_09795 IPR015590 Aldehyde dehydrogenase domain EP560_09795 IPR016161 Aldehyde/histidinol dehydrogenase EP560_09795 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_09795 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP560_09795 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_09795 IPR013321 Arc-type ribbon-helix-helix EP560_09795 IPR025703 Bifunctional protein PutA EP560_09795 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 EP560_09795 IPR024082 Proline dehydrogenase PutA, domain II EP560_09795 IPR024089 Proline dehydrogenase PutA, domain I/II EP560_09795 IPR010985 Ribbon-helix-helix EP560_09795 IPR024090 Proline dehydrogenase PutA, domain I EP560_09795 IPR029041 FAD-linked oxidoreductase-like EP560_09795 IPR016160 Aldehyde dehydrogenase, cysteine active site EP560_09795 IPR002872 Proline dehydrogenase domain EP560_09795 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain EP560_09800 IPR007344 GrpB/Dephospho-CoA kinase EP560_09805 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA EP560_09805 IPR030390 RNA methyltransferase TrmA, active site EP560_09805 IPR030391 RNA methyltransferase TrmA, conserved site EP560_09805 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_09805 IPR010280 (Uracil-5)-methyltransferase family EP560_09815 IPR018711 Phosphodiester glycosidase EP560_09825 IPR007372 Lipid/polyisoprenoid-binding, YceI-like EP560_09825 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily EP560_09825 IPR023480 Uncharacterised protein family UPF0312/YceI EP560_09835 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II EP560_09835 IPR005478 Transketolase, bacterial-like EP560_09835 IPR029061 Thiamin diphosphate-binding fold EP560_09835 IPR020826 Transketolase binding site EP560_09835 IPR033248 Transketolase, C-terminal domain EP560_09835 IPR005474 Transketolase, N-terminal EP560_09835 IPR005475 Transketolase-like, pyrimidine-binding domain EP560_09835 IPR033247 Transketolase family EP560_09840 IPR022629 S-adenosylmethionine synthetase, central domain EP560_09840 IPR002133 S-adenosylmethionine synthetase EP560_09840 IPR022636 S-adenosylmethionine synthetase superfamily EP560_09840 IPR022630 S-adenosylmethionine synthetase, C-terminal EP560_09840 IPR022631 S-adenosylmethionine synthetase, conserved site EP560_09840 IPR022628 S-adenosylmethionine synthetase, N-terminal EP560_09865 IPR001460 Penicillin-binding protein, transpeptidase EP560_09865 IPR012338 Beta-lactamase/transpeptidase-like EP560_09870 IPR000182 GNAT domain EP560_09870 IPR016181 Acyl-CoA N-acyltransferase EP560_09880 IPR036397 Ribonuclease H superfamily EP560_09880 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site EP560_09880 IPR012337 Ribonuclease H-like superfamily EP560_09880 IPR002176 Crossover junction endodeoxyribonuclease RuvC EP560_09885 IPR029056 Ribokinase-like EP560_09885 IPR004443 YjeF N-terminal domain EP560_09885 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr EP560_09885 IPR036652 YjeF N-terminal domain superfamily EP560_09885 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase EP560_09890 IPR013542 Domain of unknown function DUF1730 EP560_09890 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain EP560_09890 IPR009051 Alpha-helical ferredoxin EP560_09890 IPR004453 Epoxyqueuosine reductase QueG EP560_09890 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site EP560_09895 IPR013785 Aldolase-type TIM barrel EP560_09895 IPR010722 Biotin and thiamin synthesis-associated domain EP560_09895 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB EP560_09895 IPR024177 Biotin synthase EP560_09895 IPR006638 Elp3/MiaB/NifB EP560_09895 IPR007197 Radical SAM EP560_09910 IPR008966 Adhesion domain superfamily EP560_09910 IPR039458 FimA-like EP560_09910 IPR036937 Fimbrial-type adhesion domain superfamily EP560_09915 IPR016147 Pili assembly chaperone, N-terminal EP560_09915 IPR001829 Pili assembly chaperone, bacterial EP560_09915 IPR036316 Pili assembly chaperone, C-terminal domain superfamily EP560_09915 IPR008962 PapD-like superfamily EP560_09915 IPR018046 Pili assembly chaperone, conserved site EP560_09915 IPR016148 Pili assembly chaperone, C-terminal EP560_09915 IPR013783 Immunoglobulin-like fold EP560_09920 IPR042186 Outer membrane usher protein FimD, plug domain EP560_09920 IPR018030 Fimbrial membrane usher, conserved site EP560_09920 IPR037224 PapC, N-terminal domain superfamily EP560_09920 IPR000015 Outer membrane usher protein EP560_09920 IPR025949 PapC-like, C-terminal domain EP560_09920 IPR025885 PapC, N-terminal domain EP560_09950 IPR000620 EamA domain EP560_09960 IPR038271 Purine-cytosine permease superfamily EP560_09960 IPR026030 Purine-cytosine permease Fcy2/21/22 EP560_09960 IPR001248 Purine-cytosine permease EP560_09970 IPR005119 LysR, substrate-binding EP560_09970 IPR000847 Transcription regulator HTH, LysR EP560_09970 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_09970 IPR036390 Winged helix DNA-binding domain superfamily EP560_09980 IPR025668 Transposase DDE domain EP560_10000 IPR023772 DNA-binding HTH domain, TetR-type, conserved site EP560_10000 IPR009057 Homeobox-like domain superfamily EP560_10000 IPR001647 DNA-binding HTH domain, TetR-type EP560_10010 IPR017856 Integrase-like, N-terminal EP560_10010 IPR029072 YebC-like EP560_10010 IPR026564 Transcriptional regulator TACO1-like, domain 3 EP560_10010 IPR002876 Transcriptional regulator TACO1-like EP560_10015 IPR011991 ArsR-like helix-turn-helix domain EP560_10015 IPR000485 AsnC-type HTH domain EP560_10015 IPR011008 Dimeric alpha-beta barrel EP560_10015 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP560_10015 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP560_10015 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10015 IPR036390 Winged helix DNA-binding domain superfamily EP560_10015 IPR019888 Transcription regulator AsnC-type EP560_10025 IPR017871 ABC transporter, conserved site EP560_10025 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_10025 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type EP560_10025 IPR003593 AAA+ ATPase domain EP560_10025 IPR003439 ABC transporter-like EP560_10030 IPR035906 MetI-like superfamily EP560_10030 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_10030 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM EP560_10030 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain EP560_10035 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ EP560_10035 IPR035906 MetI-like superfamily EP560_10035 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain EP560_10035 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_10050 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_10050 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_10050 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_10050 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_10050 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain EP560_10060 IPR011251 Luciferase-like domain EP560_10060 IPR036661 Luciferase-like domain superfamily EP560_10060 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A EP560_10065 IPR004872 Lipoprotein NlpA family EP560_10070 IPR004872 Lipoprotein NlpA family EP560_10075 IPR003593 AAA+ ATPase domain EP560_10075 IPR026253 Methionine import ATP-binding protein MetN EP560_10075 IPR003439 ABC transporter-like EP560_10075 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain EP560_10075 IPR018449 NIL domain EP560_10075 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_10075 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal EP560_10075 IPR017871 ABC transporter, conserved site EP560_10080 IPR035906 MetI-like superfamily EP560_10080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_10085 IPR012676 TGS-like EP560_10085 IPR023192 TGS-like domain superfamily EP560_10085 IPR004095 TGS EP560_10085 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 EP560_10085 IPR012675 Beta-grasp domain superfamily EP560_10085 IPR031167 OBG-type guanine nucleotide-binding (G) domain EP560_10085 IPR006073 GTP binding domain EP560_10085 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_10085 IPR013029 YchF, C-terminal domain EP560_10085 IPR041706 YchF, N-terminal EP560_10110 IPR011606 Branched-chain amino acid transport, permease EP560_10115 IPR008407 Branched-chain amino acid transport, AzlD EP560_10125 IPR011054 Rudiment single hybrid motif EP560_10125 IPR013815 ATP-grasp fold, subdomain 1 EP560_10125 IPR011761 ATP-grasp fold EP560_10125 IPR016185 Pre-ATP-grasp domain superfamily EP560_10125 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type EP560_10125 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase EP560_10130 IPR002934 Polymerase, nucleotidyl transferase domain EP560_10130 IPR006674 HD domain EP560_10130 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase EP560_10130 IPR002912 ACT domain EP560_10130 IPR003607 HD/PDEase domain EP560_10130 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme EP560_10135 IPR004839 Aminotransferase, class I/classII EP560_10135 IPR015424 Pyridoxal phosphate-dependent transferase EP560_10135 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ EP560_10135 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_10135 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_10145 IPR020449 Transcription regulator HTH, AraC- type EP560_10145 IPR018060 DNA binding HTH domain, AraC-type EP560_10145 IPR014710 RmlC-like jelly roll fold EP560_10145 IPR011051 RmlC-like cupin domain superfamily EP560_10145 IPR009057 Homeobox-like domain superfamily EP560_10145 IPR032783 AraC-type transcription regulator, ligand-binding domain EP560_10150 IPR000889 Glutathione peroxidase EP560_10150 IPR036249 Thioredoxin-like superfamily EP560_10150 IPR029760 Glutathione peroxidase conserved site EP560_10150 IPR029759 Glutathione peroxidase active site EP560_10155 IPR028427 Peptide methionine sulfoxide reductase EP560_10155 IPR011057 Mss4-like superfamily EP560_10155 IPR002579 Peptide methionine sulphoxide reductase MrsB EP560_10160 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_10160 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_10160 IPR015424 Pyridoxal phosphate-dependent transferase EP560_10160 IPR004839 Aminotransferase, class I/classII EP560_10165 IPR025668 Transposase DDE domain EP560_10170 IPR023954 C4-dicarboxylate transport protein EP560_10170 IPR001991 Sodium:dicarboxylate symporter EP560_10170 IPR018107 Sodium:dicarboxylate symporter, conserved site EP560_10170 IPR036458 Sodium:dicarboxylate symporter superfamily EP560_10175 IPR004550 L-asparaginase, type II EP560_10175 IPR027474 L-asparaginase, N-terminal EP560_10175 IPR037152 L-asparaginase, N-terminal domain superfamily EP560_10175 IPR040919 Asparaginase/glutaminase, C-terminal EP560_10175 IPR006034 Asparaginase/glutaminase-like EP560_10175 IPR027475 Asparaginase/glutaminase, active site 2 EP560_10175 IPR027473 L-asparaginase, C-terminal EP560_10175 IPR020827 Asparaginase/glutaminase, active site 1 EP560_10175 IPR036152 Asparaginase/glutaminase-like superfamily EP560_10180 IPR040982 DNA polymerase III alpha subunit finger domain EP560_10180 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type EP560_10180 IPR004013 PHP domain EP560_10180 IPR003141 Polymerase/histidinol phosphatase, N-terminal EP560_10180 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain EP560_10180 IPR016195 Polymerase/histidinol phosphatase-like EP560_10180 IPR029460 DNA polymerase, helix-hairpin-helix motif EP560_10180 IPR004805 DNA polymerase III, alpha subunit EP560_10180 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain EP560_10185 IPR029028 Alpha/beta knot methyltransferases EP560_10185 IPR004384 RNA methyltransferase TrmJ/LasT EP560_10185 IPR001537 tRNA/rRNA methyltransferase, SpoU type EP560_10185 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal EP560_10190 IPR011004 Trimeric LpxA-like superfamily EP560_10190 IPR018357 Hexapeptide transferase, conserved site EP560_10190 IPR042122 Serine acetyltransferase, N-terminal domain superfamily EP560_10190 IPR005881 Serine O-acetyltransferase EP560_10190 IPR001451 Hexapeptide repeat EP560_10205 IPR036249 Thioredoxin-like superfamily EP560_10205 IPR023753 FAD/NAD(P)-binding domain EP560_10205 IPR012081 Alkyl hydroperoxide reductase subunit F EP560_10205 IPR012336 Thioredoxin-like fold EP560_10205 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_10205 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site EP560_10205 IPR002109 Glutaredoxin EP560_10220 IPR005119 LysR, substrate-binding EP560_10220 IPR000847 Transcription regulator HTH, LysR EP560_10220 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10220 IPR036390 Winged helix DNA-binding domain superfamily EP560_10225 IPR004706 Arsenical-resistance protein Acr3 EP560_10225 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 EP560_10225 IPR038770 Sodium/solute symporter superfamily EP560_10230 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10230 IPR011991 ArsR-like helix-turn-helix domain EP560_10230 IPR001845 HTH ArsR-type DNA-binding domain EP560_10230 IPR036390 Winged helix DNA-binding domain superfamily EP560_10235 IPR036249 Thioredoxin-like superfamily EP560_10235 IPR006660 Arsenate reductase-like EP560_10235 IPR006659 Arsenate reductase EP560_10245 IPR006679 Adenine deaminase EP560_10245 IPR026912 Adenine deaminase C-terminal domain EP560_10245 IPR032466 Metal-dependent hydrolase EP560_10245 IPR006680 Amidohydrolase-related EP560_10245 IPR011059 Metal-dependent hydrolase, composite domain superfamily EP560_10255 IPR036390 Winged helix DNA-binding domain superfamily EP560_10255 IPR000847 Transcription regulator HTH, LysR EP560_10255 IPR005119 LysR, substrate-binding EP560_10255 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10265 IPR038271 Purine-cytosine permease superfamily EP560_10265 IPR001248 Purine-cytosine permease EP560_10265 IPR012681 Nucleobase cation symporter-1, NCS1 EP560_10270 IPR015942 Asp/Glu/hydantoin racemase EP560_10275 IPR003819 TauD/TfdA-like domain EP560_10275 IPR042098 Taurine dioxygenase TauD-like superfamily EP560_10280 IPR035906 MetI-like superfamily EP560_10280 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_10285 IPR003439 ABC transporter-like EP560_10285 IPR017871 ABC transporter, conserved site EP560_10285 IPR003593 AAA+ ATPase domain EP560_10285 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_10285 IPR015859 ABC transporter, taurine import, TauD EP560_10290 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP560_10290 IPR010068 Taurine ABC transporter, substrate-binding protein TauA EP560_10290 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain EP560_10310 IPR005829 Sugar transporter, conserved site EP560_10310 IPR036259 MFS transporter superfamily EP560_10310 IPR005828 Major facilitator, sugar transporter-like EP560_10310 IPR020846 Major facilitator superfamily domain EP560_10315 IPR036661 Luciferase-like domain superfamily EP560_10315 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A EP560_10315 IPR011251 Luciferase-like domain EP560_10320 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain EP560_10320 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_10320 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_10320 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_10320 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_10320 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_10335 IPR002585 Cytochrome ubiquinol oxidase subunit 1 EP560_10340 IPR003317 Cytochrome ubiquinol oxidase subunit 2 EP560_10350 IPR015424 Pyridoxal phosphate-dependent transferase EP560_10350 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_10350 IPR036390 Winged helix DNA-binding domain superfamily EP560_10350 IPR004839 Aminotransferase, class I/classII EP560_10350 IPR000524 Transcription regulator HTH, GntR EP560_10350 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10350 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_10355 IPR037400 Malonate utilization transcriptional regulator, PBP2 domain EP560_10355 IPR000847 Transcription regulator HTH, LysR EP560_10355 IPR036390 Winged helix DNA-binding domain superfamily EP560_10355 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10355 IPR005119 LysR, substrate-binding EP560_10370 IPR001227 Acyl transferase domain superfamily EP560_10370 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding EP560_10370 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase EP560_10370 IPR024925 Malonyl CoA-acyl carrier protein transacylase EP560_10370 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type EP560_10370 IPR014043 Acyl transferase EP560_10375 IPR017557 Phosphoribosyl-dephospho-CoA transferase EP560_10380 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit EP560_10380 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal EP560_10380 IPR029045 ClpP/crotonase-like domain superfamily EP560_10385 IPR017556 Biotin-independent malonate decarboxylase, beta subunit EP560_10385 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal EP560_10385 IPR029045 ClpP/crotonase-like domain superfamily EP560_10385 IPR034733 Acetyl-CoA carboxylase EP560_10390 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein EP560_10390 IPR009662 Malonate decarboxylase delta subunit EP560_10395 IPR002736 Triphosphoribosyl-dephospho-CoA protein EP560_10395 IPR017555 Triphosphoribosyl-dephospho-CoA synthase EP560_10400 IPR005777 Acetyl-S-ACP:malonate ACP transferase EP560_10400 IPR037171 NagB/RpiA transferase-like EP560_10405 IPR011701 Major facilitator superfamily EP560_10405 IPR020846 Major facilitator superfamily domain EP560_10405 IPR036259 MFS transporter superfamily EP560_10420 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10420 IPR000524 Transcription regulator HTH, GntR EP560_10420 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_10420 IPR015424 Pyridoxal phosphate-dependent transferase EP560_10420 IPR004839 Aminotransferase, class I/classII EP560_10420 IPR036390 Winged helix DNA-binding domain superfamily EP560_10425 IPR005261 Conserved hypothetical protein CHP00659 EP560_10425 IPR007300 CidB/LrgB family EP560_10430 IPR023760 Holin-like protein CidA EP560_10430 IPR005538 LrgA/CidA family EP560_10435 IPR005119 LysR, substrate-binding EP560_10435 IPR000847 Transcription regulator HTH, LysR EP560_10435 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10435 IPR036390 Winged helix DNA-binding domain superfamily EP560_10440 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal EP560_10440 IPR036249 Thioredoxin-like superfamily EP560_10440 IPR040079 Glutathione Transferase family EP560_10440 IPR036282 Glutathione S-transferase, C-terminal domain superfamily EP560_10440 IPR004045 Glutathione S-transferase, N-terminal EP560_10440 IPR010987 Glutathione S-transferase, C-terminal-like EP560_10445 IPR010987 Glutathione S-transferase, C-terminal-like EP560_10445 IPR036282 Glutathione S-transferase, C-terminal domain superfamily EP560_10445 IPR040079 Glutathione Transferase family EP560_10445 IPR036249 Thioredoxin-like superfamily EP560_10445 IPR004045 Glutathione S-transferase, N-terminal EP560_10450 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10450 IPR036390 Winged helix DNA-binding domain superfamily EP560_10450 IPR000847 Transcription regulator HTH, LysR EP560_10450 IPR005119 LysR, substrate-binding EP560_10455 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_10455 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_10455 IPR036291 NAD(P)-binding domain superfamily EP560_10455 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase EP560_10460 IPR001763 Rhodanese-like domain EP560_10460 IPR023695 Thiosulfate sulfurtransferase, bacterial EP560_10460 IPR036873 Rhodanese-like domain superfamily EP560_10465 IPR001451 Hexapeptide repeat EP560_10465 IPR011004 Trimeric LpxA-like superfamily EP560_10465 IPR042122 Serine acetyltransferase, N-terminal domain superfamily EP560_10475 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_10475 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_10475 IPR000192 Aminotransferase class V domain EP560_10475 IPR015424 Pyridoxal phosphate-dependent transferase EP560_10475 IPR010970 Cysteine desulfurase, SufS EP560_10485 IPR004778 Homoserine/Threonine efflux protein EP560_10485 IPR001123 Amino acid exporter protein, LeuE-type EP560_10490 IPR036390 Winged helix DNA-binding domain superfamily EP560_10490 IPR000847 Transcription regulator HTH, LysR EP560_10490 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10490 IPR005119 LysR, substrate-binding EP560_10500 IPR001320 Ionotropic glutamate receptor EP560_10500 IPR018313 Solute-binding protein family 3, conserved site EP560_10500 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP560_10505 IPR018313 Solute-binding protein family 3, conserved site EP560_10505 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP560_10510 IPR017871 ABC transporter, conserved site EP560_10510 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_10510 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type EP560_10510 IPR003439 ABC transporter-like EP560_10510 IPR003593 AAA+ ATPase domain EP560_10515 IPR035906 MetI-like superfamily EP560_10515 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain EP560_10515 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_10520 IPR035906 MetI-like superfamily EP560_10520 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_10520 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain EP560_10535 IPR037522 HD-GYP domain EP560_10535 IPR003607 HD/PDEase domain EP560_10535 IPR001789 Signal transduction response regulator, receiver domain EP560_10535 IPR011006 CheY-like superfamily EP560_10540 IPR001789 Signal transduction response regulator, receiver domain EP560_10540 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP560_10540 IPR029151 Periplasmic sensor-like domain superfamily EP560_10540 IPR035965 PAS domain superfamily EP560_10540 IPR015387 LuxQ, periplasmic EP560_10540 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP560_10540 IPR005467 Histidine kinase domain EP560_10540 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_10540 IPR003594 Histidine kinase/HSP90-like ATPase EP560_10540 IPR011006 CheY-like superfamily EP560_10540 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP560_10550 IPR036390 Winged helix DNA-binding domain superfamily EP560_10550 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10550 IPR019888 Transcription regulator AsnC-type EP560_10550 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP560_10550 IPR011008 Dimeric alpha-beta barrel EP560_10550 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP560_10550 IPR000485 AsnC-type HTH domain EP560_10550 IPR011991 ArsR-like helix-turn-helix domain EP560_10560 IPR006197 Peptidase S24, LexA-like EP560_10560 IPR015927 Peptidase S24/S26A/S26B/S26C EP560_10560 IPR039418 LexA-like EP560_10560 IPR036286 LexA/Signal peptidase-like superfamily EP560_10580 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_10580 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_10580 IPR036291 NAD(P)-binding domain superfamily EP560_10585 IPR010582 Catalase immune-responsive domain EP560_10585 IPR002226 Catalase haem-binding site EP560_10585 IPR037060 Catalase core domain superfamily EP560_10585 IPR011614 Catalase core domain EP560_10585 IPR020835 Catalase superfamily EP560_10585 IPR024708 Catalase active site EP560_10585 IPR024712 Catalase, mono-functional, haem-containing, clade 2 EP560_10585 IPR018028 Catalase, mono-functional, haem-containing EP560_10585 IPR029062 Class I glutamine amidotransferase-like EP560_10585 IPR041399 Large catalase, C-terminal domain EP560_10595 IPR008135 Competence-induced protein CinA EP560_10595 IPR036425 MoaB/Mog-like domain superfamily EP560_10595 IPR008136 CinA, C-terminal EP560_10595 IPR036653 CinA-like, C-terminal EP560_10595 IPR001453 MoaB/Mog domain EP560_10595 IPR041424 CinA, KH domain EP560_10625 IPR036390 Winged helix DNA-binding domain superfamily EP560_10625 IPR000847 Transcription regulator HTH, LysR EP560_10625 IPR005119 LysR, substrate-binding EP560_10625 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10645 IPR025110 AMP-binding enzyme, C-terminal domain EP560_10645 IPR000873 AMP-dependent synthetase/ligase EP560_10645 IPR020845 AMP-binding, conserved site EP560_10650 IPR009057 Homeobox-like domain superfamily EP560_10650 IPR001647 DNA-binding HTH domain, TetR-type EP560_10655 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_10655 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_10655 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_10655 IPR006089 Acyl-CoA dehydrogenase, conserved site EP560_10655 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_10655 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_10655 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_10660 IPR029045 ClpP/crotonase-like domain superfamily EP560_10660 IPR034733 Acetyl-CoA carboxylase EP560_10660 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal EP560_10660 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal EP560_10665 IPR014748 Enoyl-CoA hydratase, C-terminal EP560_10665 IPR029045 ClpP/crotonase-like domain superfamily EP560_10665 IPR001753 Enoyl-CoA hydratase/isomerase EP560_10665 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site EP560_10670 IPR011761 ATP-grasp fold EP560_10670 IPR005481 Biotin carboxylase-like, N-terminal domain EP560_10670 IPR016185 Pre-ATP-grasp domain superfamily EP560_10670 IPR001882 Biotin-binding site EP560_10670 IPR011764 Biotin carboxylation domain EP560_10670 IPR005482 Biotin carboxylase, C-terminal EP560_10670 IPR011053 Single hybrid motif EP560_10670 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain EP560_10670 IPR000089 Biotin/lipoyl attachment EP560_10670 IPR011054 Rudiment single hybrid motif EP560_10675 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site EP560_10675 IPR000891 Pyruvate carboxyltransferase EP560_10675 IPR013785 Aldolase-type TIM barrel EP560_10675 IPR027167 Hydroxymethylglutaryl-CoA lyase EP560_10680 IPR000847 Transcription regulator HTH, LysR EP560_10680 IPR005119 LysR, substrate-binding EP560_10680 IPR036390 Winged helix DNA-binding domain superfamily EP560_10680 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10695 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_10695 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_10695 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain EP560_10695 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_10695 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_10695 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_10695 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_10705 IPR011701 Major facilitator superfamily EP560_10705 IPR020846 Major facilitator superfamily domain EP560_10705 IPR036259 MFS transporter superfamily EP560_10715 IPR037171 NagB/RpiA transferase-like EP560_10715 IPR012791 3-oxoacid CoA-transferase, subunit B EP560_10715 IPR004165 Coenzyme A transferase family I EP560_10715 IPR004164 Coenzyme A transferase active site EP560_10720 IPR012792 3-oxoacid CoA-transferase, subunit A EP560_10720 IPR004165 Coenzyme A transferase family I EP560_10720 IPR004163 Coenzyme A transferase binding site EP560_10720 IPR037171 NagB/RpiA transferase-like EP560_10725 IPR036259 MFS transporter superfamily EP560_10725 IPR020846 Major facilitator superfamily domain EP560_10725 IPR005829 Sugar transporter, conserved site EP560_10725 IPR011701 Major facilitator superfamily EP560_10725 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family EP560_10730 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_10730 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_10730 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_10730 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_10730 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_10730 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_10730 IPR006089 Acyl-CoA dehydrogenase, conserved site EP560_10735 IPR029045 ClpP/crotonase-like domain superfamily EP560_10735 IPR014748 Enoyl-CoA hydratase, C-terminal EP560_10735 IPR001753 Enoyl-CoA hydratase/isomerase EP560_10735 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site EP560_10740 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase EP560_10740 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_10740 IPR036291 NAD(P)-binding domain superfamily EP560_10740 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_10745 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding EP560_10745 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC EP560_10745 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain EP560_10745 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP560_10745 IPR036291 NAD(P)-binding domain superfamily EP560_10745 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site EP560_10745 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal EP560_10750 IPR002155 Thiolase EP560_10750 IPR012793 Beta-ketoadipyl CoA thiolase EP560_10750 IPR016039 Thiolase-like EP560_10750 IPR020615 Thiolase, acyl-enzyme intermediate active site EP560_10750 IPR020610 Thiolase, active site EP560_10750 IPR020617 Thiolase, C-terminal EP560_10750 IPR020613 Thiolase, conserved site EP560_10750 IPR020616 Thiolase, N-terminal EP560_10755 IPR014757 Transcription regulator IclR, C-terminal EP560_10755 IPR036390 Winged helix DNA-binding domain superfamily EP560_10755 IPR029016 GAF-like domain superfamily EP560_10755 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10755 IPR005471 Transcription regulator IclR, N-terminal EP560_10760 IPR020846 Major facilitator superfamily domain EP560_10760 IPR011701 Major facilitator superfamily EP560_10760 IPR036259 MFS transporter superfamily EP560_10765 IPR013785 Aldolase-type TIM barrel EP560_10765 IPR004136 Nitronate monooxygenase EP560_10770 IPR029045 ClpP/crotonase-like domain superfamily EP560_10770 IPR001753 Enoyl-CoA hydratase/isomerase EP560_10770 IPR014748 Enoyl-CoA hydratase, C-terminal EP560_10770 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB EP560_10775 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10775 IPR005471 Transcription regulator IclR, N-terminal EP560_10775 IPR014757 Transcription regulator IclR, C-terminal EP560_10775 IPR029016 GAF-like domain superfamily EP560_10775 IPR036390 Winged helix DNA-binding domain superfamily EP560_10780 IPR003673 CoA-transferase family III EP560_10780 IPR023606 CoA-transferase family III domain superfamily EP560_10785 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_10785 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_10785 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_10785 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_10785 IPR006089 Acyl-CoA dehydrogenase, conserved site EP560_10785 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_10785 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_10790 IPR036259 MFS transporter superfamily EP560_10790 IPR011701 Major facilitator superfamily EP560_10790 IPR020846 Major facilitator superfamily domain EP560_10790 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family EP560_10790 IPR005829 Sugar transporter, conserved site EP560_10795 IPR041492 Haloacid dehalogenase-like hydrolase EP560_10795 IPR023214 HAD superfamily EP560_10795 IPR023198 Phosphoglycolate phosphatase-like, domain 2 EP560_10795 IPR006323 Phosphonoacetaldehyde hydrolase EP560_10795 IPR006439 HAD hydrolase, subfamily IA EP560_10795 IPR036412 HAD-like superfamily EP560_10800 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_10800 IPR015424 Pyridoxal phosphate-dependent transferase EP560_10800 IPR012703 2-aminoethylphosphonate--pyruvate transaminase EP560_10800 IPR000192 Aminotransferase class V domain EP560_10800 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase EP560_10800 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_10805 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_10805 IPR006281 Sarcosine oxidase, monomeric EP560_10805 IPR006076 FAD dependent oxidoreductase EP560_10810 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_10810 IPR035906 MetI-like superfamily EP560_10815 IPR003439 ABC transporter-like EP560_10815 IPR017871 ABC transporter, conserved site EP560_10815 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 EP560_10815 IPR003593 AAA+ ATPase domain EP560_10815 IPR008995 Molybdate/tungstate binding, C-terminal EP560_10815 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_10815 IPR013611 Transport-associated OB, type 2 EP560_10815 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal EP560_10825 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10825 IPR011663 UbiC transcription regulator-associated EP560_10825 IPR036390 Winged helix DNA-binding domain superfamily EP560_10825 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily EP560_10825 IPR017722 Phosphonate utilization transcriptional regulator PhnR EP560_10825 IPR000524 Transcription regulator HTH, GntR EP560_10830 IPR012733 4-hydroxybenzoate 3-monooxygenase EP560_10830 IPR002938 FAD-binding domain EP560_10830 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_10835 IPR029016 GAF-like domain superfamily EP560_10835 IPR036390 Winged helix DNA-binding domain superfamily EP560_10835 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR EP560_10835 IPR014757 Transcription regulator IclR, C-terminal EP560_10835 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10835 IPR005471 Transcription regulator IclR, N-terminal EP560_10845 IPR032874 DDE domain EP560_10845 IPR001584 Integrase, catalytic core EP560_10845 IPR012337 Ribonuclease H-like superfamily EP560_10845 IPR036397 Ribonuclease H superfamily EP560_10855 IPR002611 IstB-like ATP-binding protein EP560_10855 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein EP560_10855 IPR001270 ClpA/B family EP560_10855 IPR003593 AAA+ ATPase domain EP560_10855 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_10860 IPR016181 Acyl-CoA N-acyltransferase EP560_10870 IPR000489 Pterin-binding domain EP560_10870 IPR011005 Dihydropteroate synthase-like EP560_10870 IPR006390 Dihydropteroate synthase EP560_10875 IPR000390 Small multidrug resistance protein family EP560_10880 IPR024172 Streptomycin 3''-adenylyltransferase EP560_10880 IPR025184 Domain of unknown function DUF4111 EP560_10880 IPR002934 Polymerase, nucleotidyl transferase domain EP560_10885 IPR019646 Aminoglycoside-2''-adenylyltransferase EP560_10890 IPR004107 Integrase, SAM-like, N-terminal EP560_10890 IPR010998 Integrase/recombinase, N-terminal EP560_10890 IPR002104 Integrase, catalytic domain EP560_10890 IPR013762 Integrase-like, catalytic domain superfamily EP560_10890 IPR011946 Integrase, integron-type EP560_10890 IPR011010 DNA breaking-rejoining enzyme, catalytic core EP560_10900 IPR009057 Homeobox-like domain superfamily EP560_10900 IPR006118 Recombinase, conserved site EP560_10900 IPR006119 Resolvase, N-terminal catalytic domain EP560_10900 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily EP560_10900 IPR006120 Resolvase, HTH domain EP560_10905 IPR001584 Integrase, catalytic core EP560_10905 IPR032874 DDE domain EP560_10905 IPR036397 Ribonuclease H superfamily EP560_10905 IPR012337 Ribonuclease H-like superfamily EP560_10915 IPR018060 DNA binding HTH domain, AraC-type EP560_10915 IPR009594 Transcription regulator HTH, AraC, N-terminal EP560_10915 IPR009057 Homeobox-like domain superfamily EP560_10925 IPR012340 Nucleic acid-binding, OB-fold EP560_10925 IPR002059 Cold-shock protein, DNA-binding EP560_10925 IPR019844 Cold-shock (CSD) domain EP560_10925 IPR011129 Cold shock domain EP560_10925 IPR012156 Cold shock, CspA EP560_10965 IPR041471 UvrB, interaction domain EP560_10965 IPR036876 UVR domain superfamily EP560_10965 IPR004807 UvrABC system, subunit B EP560_10965 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP560_10965 IPR024759 UvrB, YAD/RRR-motif-containing domain EP560_10965 IPR001650 Helicase, C-terminal EP560_10965 IPR001943 UVR domain EP560_10965 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_10965 IPR006935 Helicase/UvrB, N-terminal EP560_10975 IPR011973 Phenylacetic acid degradation protein PaaD EP560_10975 IPR029069 HotDog domain superfamily EP560_10975 IPR003736 Phenylacetic acid degradation-related domain EP560_10975 IPR006683 Thioesterase domain EP560_10980 IPR023446 Carnitine operon protein CaiE EP560_10980 IPR011004 Trimeric LpxA-like superfamily EP560_10980 IPR001451 Hexapeptide repeat EP560_10985 IPR013225 PaaX-like, C-terminal EP560_10985 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX EP560_10985 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_10985 IPR012906 PaaX-like, N-terminal EP560_10990 IPR042099 AMP-dependent synthetase-like superfamily EP560_10990 IPR028154 AMP-dependent ligase, C-terminal EP560_10990 IPR000873 AMP-dependent synthetase/ligase EP560_10990 IPR011880 Phenylacetate-CoA ligase EP560_10995 IPR020616 Thiolase, N-terminal EP560_10995 IPR016039 Thiolase-like EP560_10995 IPR020615 Thiolase, acyl-enzyme intermediate active site EP560_10995 IPR020610 Thiolase, active site EP560_10995 IPR020617 Thiolase, C-terminal EP560_10995 IPR020613 Thiolase, conserved site EP560_10995 IPR012793 Beta-ketoadipyl CoA thiolase EP560_10995 IPR002155 Thiolase EP560_11000 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site EP560_11000 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding EP560_11000 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal EP560_11000 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain EP560_11000 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP560_11000 IPR036291 NAD(P)-binding domain superfamily EP560_11000 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC EP560_11005 IPR029045 ClpP/crotonase-like domain superfamily EP560_11005 IPR014748 Enoyl-CoA hydratase, C-terminal EP560_11005 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB EP560_11005 IPR001753 Enoyl-CoA hydratase/isomerase EP560_11010 IPR014748 Enoyl-CoA hydratase, C-terminal EP560_11010 IPR029045 ClpP/crotonase-like domain superfamily EP560_11010 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site EP560_11010 IPR001753 Enoyl-CoA hydratase/isomerase EP560_11015 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site EP560_11015 IPR012675 Beta-grasp domain superfamily EP560_11015 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain EP560_11015 IPR017927 FAD-binding domain, ferredoxin reductase-type EP560_11015 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase EP560_11015 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP560_11015 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP560_11015 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit EP560_11015 IPR036010 2Fe-2S ferredoxin-like superfamily EP560_11015 IPR017938 Riboflavin synthase-like beta-barrel EP560_11015 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP560_11020 IPR034904 Fe-S cluster assembly domain superfamily EP560_11020 IPR002744 MIP18 family-like EP560_11020 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit EP560_11025 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C EP560_11025 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C EP560_11025 IPR009078 Ferritin-like superfamily EP560_11025 IPR012347 Ferritin-like EP560_11030 IPR038693 Phenylacetyl-CoA epoxidase, subunit B EP560_11030 IPR009359 Phenylacetic acid degradation B EP560_11035 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C EP560_11035 IPR009078 Ferritin-like superfamily EP560_11035 IPR012347 Ferritin-like EP560_11035 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A EP560_11040 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_11040 IPR011966 Phenylacetic acid degradation protein PaaN EP560_11040 IPR002539 MaoC-like dehydratase domain EP560_11040 IPR016161 Aldehyde/histidinol dehydrogenase EP560_11040 IPR029069 HotDog domain superfamily EP560_11040 IPR015590 Aldehyde dehydrogenase domain EP560_11040 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_11045 IPR029009 Allosteric substrate binding domain superfamily EP560_11045 IPR005131 Serine dehydratase beta chain EP560_11045 IPR005130 Serine dehydratase-like, alpha subunit EP560_11045 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form EP560_11050 IPR002293 Amino acid/polyamine transporter I EP560_11055 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_11055 IPR016161 Aldehyde/histidinol dehydrogenase EP560_11055 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_11055 IPR015590 Aldehyde dehydrogenase domain EP560_11060 IPR005829 Sugar transporter, conserved site EP560_11060 IPR036259 MFS transporter superfamily EP560_11060 IPR005828 Major facilitator, sugar transporter-like EP560_11060 IPR020846 Major facilitator superfamily domain EP560_11070 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily EP560_11070 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_11070 IPR007419 BFD-like [2Fe-2S]-binding domain EP560_11070 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B EP560_11070 IPR023753 FAD/NAD(P)-binding domain EP560_11080 IPR023080 D-amino acid dehydrogenase DadA EP560_11080 IPR006076 FAD dependent oxidoreductase EP560_11080 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_11085 IPR008794 Proline racemase family EP560_11090 IPR008920 Transcription regulator FadR/GntR, C-terminal EP560_11090 IPR000524 Transcription regulator HTH, GntR EP560_11090 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_11090 IPR036390 Winged helix DNA-binding domain superfamily EP560_11100 IPR013785 Aldolase-type TIM barrel EP560_11100 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA EP560_11100 IPR002220 DapA-like EP560_11100 IPR020625 Schiff base-forming aldolase, active site EP560_11100 IPR020624 Schiff base-forming aldolase, conserved site EP560_11115 IPR015358 Transcription regulator MerR, DNA binding EP560_11115 IPR010211 Redox-sensitive transcriptional activator SoxR EP560_11115 IPR000551 MerR-type HTH domain EP560_11115 IPR009061 Putative DNA-binding domain superfamily EP560_11125 IPR003828 Epoxyqueuosine reductase QueH EP560_11140 IPR011701 Major facilitator superfamily EP560_11140 IPR020846 Major facilitator superfamily domain EP560_11140 IPR004747 Cyanate transport system protein EP560_11140 IPR036259 MFS transporter superfamily EP560_11145 IPR016192 APOBEC/CMP deaminase, zinc-binding EP560_11145 IPR002125 Cytidine and deoxycytidylate deaminase domain EP560_11145 IPR016193 Cytidine deaminase-like EP560_11155 IPR036390 Winged helix DNA-binding domain superfamily EP560_11155 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_11155 IPR000847 Transcription regulator HTH, LysR EP560_11155 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain EP560_11155 IPR005119 LysR, substrate-binding EP560_11185 IPR003593 AAA+ ATPase domain EP560_11185 IPR003959 ATPase, AAA-type, core EP560_11185 IPR017729 Type VI secretion system, ATPase ClpV1 EP560_11185 IPR036628 Clp, N-terminal domain superfamily EP560_11185 IPR004176 Clp, N-terminal EP560_11185 IPR001270 ClpA/B family EP560_11185 IPR018368 ClpA/B, conserved site 1 EP560_11185 IPR041546 ClpA/ClpB, AAA lid domain EP560_11185 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_11185 IPR019489 Clp ATPase, C-terminal EP560_11195 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel EP560_11195 IPR036737 OmpA-like domain superfamily EP560_11195 IPR002368 Outer membrane protein, OmpA EP560_11195 IPR006665 OmpA-like domain EP560_11195 IPR006690 Outer membrane protein, OmpA-like, conserved site EP560_11195 IPR000498 Outer membrane protein OmpA-like, transmembrane domain EP560_11195 IPR006664 Outer membrane protein, bacterial EP560_11270 IPR003439 ABC transporter-like EP560_11270 IPR003593 AAA+ ATPase domain EP560_11270 IPR017871 ABC transporter, conserved site EP560_11270 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_11275 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP560_11275 IPR001320 Ionotropic glutamate receptor EP560_11275 IPR018313 Solute-binding protein family 3, conserved site EP560_11280 IPR023631 Amidase signature domain EP560_11280 IPR036928 Amidase signature (AS) superfamily EP560_11280 IPR014085 Allophanate hydrolase EP560_11285 IPR014864 Transcription factor, NikR, nickel binding C-terminal EP560_11285 IPR010985 Ribbon-helix-helix EP560_11285 IPR022988 Nickel-responsive transcriptional regulator NikR EP560_11285 IPR002145 Ribbon-helix-helix protein, CopG EP560_11285 IPR013321 Arc-type ribbon-helix-helix EP560_11285 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal EP560_11305 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF EP560_11305 IPR003680 Flavodoxin-like fold EP560_11305 IPR029039 Flavoprotein-like superfamily EP560_11310 IPR016185 Pre-ATP-grasp domain superfamily EP560_11310 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain EP560_11310 IPR011764 Biotin carboxylation domain EP560_11310 IPR011054 Rudiment single hybrid motif EP560_11310 IPR005482 Biotin carboxylase, C-terminal EP560_11310 IPR005481 Biotin carboxylase-like, N-terminal domain EP560_11310 IPR011761 ATP-grasp fold EP560_11335 IPR013154 Alcohol dehydrogenase, N-terminal EP560_11335 IPR027399 Alcohol dehydrogenase GroES-associated EP560_11335 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site EP560_11335 IPR013149 Alcohol dehydrogenase, C-terminal EP560_11335 IPR036291 NAD(P)-binding domain superfamily EP560_11335 IPR011032 GroES-like superfamily EP560_11345 IPR009057 Homeobox-like domain superfamily EP560_11345 IPR001647 DNA-binding HTH domain, TetR-type EP560_11370 IPR001807 Chloride channel, voltage gated EP560_11370 IPR014743 Chloride channel, core EP560_11375 IPR011761 ATP-grasp fold EP560_11375 IPR005481 Biotin carboxylase-like, N-terminal domain EP560_11375 IPR000089 Biotin/lipoyl attachment EP560_11375 IPR005482 Biotin carboxylase, C-terminal EP560_11375 IPR011764 Biotin carboxylation domain EP560_11375 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain EP560_11375 IPR011053 Single hybrid motif EP560_11375 IPR011054 Rudiment single hybrid motif EP560_11375 IPR016185 Pre-ATP-grasp domain superfamily EP560_11375 IPR001882 Biotin-binding site EP560_11385 IPR038021 Putative hydro-lyase EP560_11385 IPR009906 D-glutamate cyclase EP560_11385 IPR016938 Uncharacterised protein family UPF0317 EP560_11390 IPR005501 LamB/YcsF/PxpA-like EP560_11390 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel EP560_11395 IPR001046 NRAMP family EP560_11400 IPR005119 LysR, substrate-binding EP560_11400 IPR000847 Transcription regulator HTH, LysR EP560_11400 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_11400 IPR036390 Winged helix DNA-binding domain superfamily EP560_11415 IPR031325 RHS repeat EP560_11415 IPR025479 Domain of unknown function DUF4329 EP560_11415 IPR022385 Rhs repeat-associated core EP560_11415 IPR001826 RHS protein EP560_11415 IPR006530 YD repeat EP560_11420 IPR032074 Actin cross-linking domain EP560_11420 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein EP560_11420 IPR037026 Vgr protein, OB-fold domain superfamily EP560_11420 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset EP560_11420 IPR006531 Gp5 N-terminal EP560_11425 IPR004291 Transposase, IS66 EP560_11425 IPR039552 Transposase IS66, C-terminal EP560_11425 IPR024463 Transposase TnpC, homeodomain EP560_11425 IPR024474 Zinc-finger binding domain of transposase IS66 EP560_11445 IPR036412 HAD-like superfamily EP560_11445 IPR023198 Phosphoglycolate phosphatase-like, domain 2 EP560_11445 IPR006439 HAD hydrolase, subfamily IA EP560_11445 IPR041492 Haloacid dehalogenase-like hydrolase EP560_11445 IPR023214 HAD superfamily EP560_11445 IPR023733 Pyrophosphatase PpaX EP560_11465 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP560_11465 IPR013328 6-phosphogluconate dehydrogenase, domain 2 EP560_11465 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding EP560_11465 IPR036291 NAD(P)-binding domain superfamily EP560_11465 IPR026578 L-carnitine dehydrogenase EP560_11465 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal EP560_11485 IPR020846 Major facilitator superfamily domain EP560_11485 IPR036259 MFS transporter superfamily EP560_11485 IPR005829 Sugar transporter, conserved site EP560_11485 IPR011701 Major facilitator superfamily EP560_11485 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family EP560_11500 IPR004960 Bacterial lipid A biosynthesis acyltransferase EP560_11500 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase EP560_11505 IPR035919 EAL domain superfamily EP560_11505 IPR000160 GGDEF domain EP560_11505 IPR029787 Nucleotide cyclase EP560_11505 IPR005330 MHYT domain EP560_11505 IPR001633 EAL domain EP560_11510 IPR000620 EamA domain EP560_11515 IPR011991 ArsR-like helix-turn-helix domain EP560_11515 IPR000485 AsnC-type HTH domain EP560_11515 IPR011008 Dimeric alpha-beta barrel EP560_11515 IPR019888 Transcription regulator AsnC-type EP560_11515 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP560_11515 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_11515 IPR036390 Winged helix DNA-binding domain superfamily EP560_11515 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP560_11520 IPR007695 DNA mismatch repair protein MutS-like, N-terminal EP560_11520 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_11520 IPR036187 DNA mismatch repair protein MutS, core domain superfamily EP560_11520 IPR016151 DNA mismatch repair protein MutS, N-terminal EP560_11520 IPR007696 DNA mismatch repair protein MutS, core EP560_11520 IPR007861 DNA mismatch repair protein MutS, clamp EP560_11520 IPR000432 DNA mismatch repair protein MutS, C-terminal EP560_11520 IPR017261 DNA mismatch repair protein MutS/MSH EP560_11520 IPR036678 MutS, connector domain superfamily EP560_11520 IPR005748 DNA mismatch repair protein MutS EP560_11520 IPR007860 DNA mismatch repair protein MutS, connector domain EP560_11530 IPR022569 Ferredoxin, C-terminal EP560_11530 IPR000813 7Fe ferredoxin EP560_11530 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site EP560_11530 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain EP560_11540 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_11540 IPR002935 Class I-like SAM-dependent O-methyltransferase EP560_11550 IPR018357 Hexapeptide transferase, conserved site EP560_11550 IPR001451 Hexapeptide repeat EP560_11550 IPR011004 Trimeric LpxA-like superfamily EP560_11555 IPR035647 EF-G domain III/V-like EP560_11555 IPR001498 Impact, N-terminal EP560_11555 IPR023582 Impact family EP560_11555 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site EP560_11555 IPR036956 Impact, N-terminal domain superfamily EP560_11555 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_11560 IPR010129 Type I secretion membrane fusion protein, HlyD family EP560_11560 IPR006144 Secretion protein HlyD, conserved site EP560_11565 IPR005897 Peptidase C39, ABC-type bacteriocin transporter EP560_11565 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_11565 IPR039421 Type I protein exporter EP560_11565 IPR003439 ABC transporter-like EP560_11565 IPR036640 ABC transporter type 1, transmembrane domain superfamily EP560_11565 IPR011527 ABC transporter type 1, transmembrane domain EP560_11565 IPR003593 AAA+ ATPase domain EP560_11565 IPR005074 Peptidase C39, bacteriocin processing EP560_11565 IPR017871 ABC transporter, conserved site EP560_11570 IPR003423 Outer membrane efflux protein EP560_11570 IPR010130 Type I secretion outer membrane protein, TolC EP560_11575 IPR003593 AAA+ ATPase domain EP560_11575 IPR003439 ABC transporter-like EP560_11575 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_11575 IPR030921 LPS export ABC transporter, ATP-binding protein LptB EP560_11575 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal EP560_11575 IPR017871 ABC transporter, conserved site EP560_11580 IPR005653 Organic solvent tolerance-like, N-terminal EP560_11580 IPR014340 Lipopolysaccharide export system protein LptA EP560_11590 IPR010023 KdsC family EP560_11590 IPR023214 HAD superfamily EP560_11590 IPR036412 HAD-like superfamily EP560_11595 IPR001347 Sugar isomerase (SIS) EP560_11595 IPR035474 KpsF-like, SIS domain EP560_11595 IPR000644 CBS domain EP560_11595 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type EP560_11600 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR EP560_11600 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding EP560_11600 IPR015803 Cysteine-tRNA ligase EP560_11600 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase EP560_11600 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_11600 IPR032678 tRNA synthetases class I, catalytic domain EP560_11620 IPR036397 Ribonuclease H superfamily EP560_11620 IPR012337 Ribonuclease H-like superfamily EP560_11620 IPR001598 Transposase, IS30, conserved site EP560_11620 IPR025246 Transposase IS30-like HTH domain EP560_11620 IPR001584 Integrase, catalytic core EP560_11625 IPR011009 Protein kinase-like domain superfamily EP560_11625 IPR024165 Aminoglycoside 3-phosphotransferase EP560_11625 IPR002575 Aminoglycoside phosphotransferase EP560_11630 IPR001598 Transposase, IS30, conserved site EP560_11630 IPR025246 Transposase IS30-like HTH domain EP560_11630 IPR036397 Ribonuclease H superfamily EP560_11630 IPR001584 Integrase, catalytic core EP560_11630 IPR012337 Ribonuclease H-like superfamily EP560_11645 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_11645 IPR002577 Helix-turn-helix, HxlR type EP560_11645 IPR011991 ArsR-like helix-turn-helix domain EP560_11645 IPR036390 Winged helix DNA-binding domain superfamily EP560_11650 IPR036259 MFS transporter superfamily EP560_11650 IPR020846 Major facilitator superfamily domain EP560_11650 IPR011701 Major facilitator superfamily EP560_11680 IPR000304 Pyrroline-5-carboxylate reductase EP560_11680 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain EP560_11680 IPR036291 NAD(P)-binding domain superfamily EP560_11680 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP560_11680 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal EP560_11690 IPR011129 Cold shock domain EP560_11690 IPR002059 Cold-shock protein, DNA-binding EP560_11690 IPR012340 Nucleic acid-binding, OB-fold EP560_11690 IPR012156 Cold shock, CspA EP560_11690 IPR019844 Cold-shock (CSD) domain EP560_11695 IPR001123 Amino acid exporter protein, LeuE-type EP560_11730 IPR003753 Exonuclease VII, large subunit EP560_11730 IPR020579 Exonuclease VII, large subunit, C-terminal EP560_11730 IPR025824 OB-fold nucleic acid binding domain EP560_11760 IPR025668 Transposase DDE domain EP560_11780 IPR000551 MerR-type HTH domain EP560_11780 IPR015358 Transcription regulator MerR, DNA binding EP560_11780 IPR011789 Cu(I)-responsive transcriptional regulator EP560_11780 IPR009061 Putative DNA-binding domain superfamily EP560_11785 IPR006122 Heavy metal-associated domain, copper ion-binding EP560_11785 IPR027256 P-type ATPase, subfamily IB EP560_11785 IPR023298 P-type ATPase, transmembrane domain superfamily EP560_11785 IPR023299 P-type ATPase, cytoplasmic domain N EP560_11785 IPR018303 P-type ATPase, phosphorylation site EP560_11785 IPR001757 P-type ATPase EP560_11785 IPR036412 HAD-like superfamily EP560_11785 IPR017969 Heavy-metal-associated, conserved site EP560_11785 IPR023214 HAD superfamily EP560_11785 IPR006121 Heavy metal-associated domain, HMA EP560_11785 IPR036163 Heavy metal-associated domain superfamily EP560_11785 IPR008250 P-type ATPase, A domain superfamily EP560_11790 IPR036163 Heavy metal-associated domain superfamily EP560_11790 IPR011795 Mercuric transport protein periplasmic component EP560_11790 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ EP560_11790 IPR006121 Heavy metal-associated domain, HMA EP560_11790 IPR017969 Heavy-metal-associated, conserved site EP560_11795 IPR005119 LysR, substrate-binding EP560_11795 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_11795 IPR036390 Winged helix DNA-binding domain superfamily EP560_11795 IPR000847 Transcription regulator HTH, LysR EP560_11800 IPR017941 Rieske [2Fe-2S] iron-sulphur domain EP560_11800 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit EP560_11800 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain EP560_11800 IPR017639 Benzoate 1,2-dioxygenase, large subunit EP560_11800 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site EP560_11800 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP560_11805 IPR032710 NTF2-like domain superfamily EP560_11805 IPR017641 Benzoate 1,2-dioxygenase, small subunit EP560_11805 IPR000391 Ring-hydroxylating dioxygenase beta subunit EP560_11810 IPR036010 2Fe-2S ferredoxin-like superfamily EP560_11810 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase EP560_11810 IPR017927 FAD-binding domain, ferredoxin reductase-type EP560_11810 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP560_11810 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site EP560_11810 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP560_11810 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain EP560_11810 IPR012675 Beta-grasp domain superfamily EP560_11810 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP560_11810 IPR017938 Riboflavin synthase-like beta-barrel EP560_11815 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_11815 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_11815 IPR036291 NAD(P)-binding domain superfamily EP560_11820 IPR004711 Benzoate transporter EP560_11825 IPR036259 MFS transporter superfamily EP560_11825 IPR020846 Major facilitator superfamily domain EP560_11825 IPR005829 Sugar transporter, conserved site EP560_11825 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family EP560_11825 IPR011701 Major facilitator superfamily EP560_11835 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EP560_11835 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal EP560_11835 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 EP560_11835 IPR016039 Thiolase-like EP560_11840 IPR010222 RNA helicase HrpA EP560_11840 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_11840 IPR003593 AAA+ ATPase domain EP560_11840 IPR011545 DEAD/DEAH box helicase domain EP560_11840 IPR011709 Domain of unknown function DUF1605 EP560_11840 IPR007502 Helicase-associated domain EP560_11840 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP560_11840 IPR001650 Helicase, C-terminal EP560_11840 IPR024590 RNA helicase HrpA, C-terminal EP560_11845 IPR017559 Alkyl hydroperoxide reductase subunit C EP560_11845 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant EP560_11845 IPR013766 Thioredoxin domain EP560_11845 IPR024706 Peroxiredoxin, AhpC-type EP560_11845 IPR019479 Peroxiredoxin, C-terminal EP560_11845 IPR036249 Thioredoxin-like superfamily EP560_11855 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_11855 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase EP560_11865 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site EP560_11865 IPR012336 Thioredoxin-like fold EP560_11865 IPR002109 Glutaredoxin EP560_11865 IPR036249 Thioredoxin-like superfamily EP560_11865 IPR023753 FAD/NAD(P)-binding domain EP560_11865 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_11865 IPR012081 Alkyl hydroperoxide reductase subunit F EP560_11875 IPR010987 Glutathione S-transferase, C-terminal-like EP560_11875 IPR036282 Glutathione S-transferase, C-terminal domain superfamily EP560_11875 IPR004045 Glutathione S-transferase, N-terminal EP560_11875 IPR004046 Glutathione S-transferase, C-terminal EP560_11875 IPR036249 Thioredoxin-like superfamily EP560_11885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_11885 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type EP560_11890 IPR010987 Glutathione S-transferase, C-terminal-like EP560_11890 IPR036282 Glutathione S-transferase, C-terminal domain superfamily EP560_11890 IPR036249 Thioredoxin-like superfamily EP560_11890 IPR004046 Glutathione S-transferase, C-terminal EP560_11890 IPR004045 Glutathione S-transferase, N-terminal EP560_11900 IPR006664 Outer membrane protein, bacterial EP560_11900 IPR039567 Glycine zipper domain EP560_11900 IPR006665 OmpA-like domain EP560_11900 IPR006690 Outer membrane protein, OmpA-like, conserved site EP560_11900 IPR036737 OmpA-like domain superfamily EP560_11905 IPR011059 Metal-dependent hydrolase, composite domain superfamily EP560_11905 IPR006680 Amidohydrolase-related EP560_11905 IPR004722 Dihydroorotase EP560_11905 IPR032466 Metal-dependent hydrolase EP560_11910 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain EP560_11910 IPR002082 Aspartate carbamoyltransferase EP560_11910 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily EP560_11910 IPR006130 Aspartate/ornithine carbamoyltransferase EP560_11910 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding EP560_11920 IPR000241 Putative RNA methylase domain EP560_11920 IPR017244 Ribosomal RNA large subunit methyltransferase K/L EP560_11920 IPR002052 DNA methylase, N-6 adenine-specific, conserved site EP560_11920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_11920 IPR004114 THUMP domain EP560_11920 IPR019614 S-adenosylmethionine-dependent methyltransferase EP560_11935 IPR028299 ClpA/B, conserved site 2 EP560_11935 IPR041546 ClpA/ClpB, AAA lid domain EP560_11935 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_11935 IPR036628 Clp, N-terminal domain superfamily EP560_11935 IPR018368 ClpA/B, conserved site 1 EP560_11935 IPR001270 ClpA/B family EP560_11935 IPR019489 Clp ATPase, C-terminal EP560_11935 IPR017730 Chaperonin ClpB EP560_11935 IPR003959 ATPase, AAA-type, core EP560_11935 IPR004176 Clp, N-terminal EP560_11935 IPR003593 AAA+ ATPase domain EP560_11950 IPR036102 OsmC/Ohr superfamily EP560_11950 IPR015946 K homology domain-like, alpha/beta EP560_11950 IPR003718 OsmC/Ohr family EP560_11955 IPR018335 Transcription regulator HTH, Crp-type, conserved site EP560_11955 IPR000595 Cyclic nucleotide-binding domain EP560_11955 IPR014710 RmlC-like jelly roll fold EP560_11955 IPR012318 Crp-type HTH domain EP560_11955 IPR018490 Cyclic nucleotide-binding-like EP560_11955 IPR018488 Cyclic nucleotide-binding, conserved site EP560_11955 IPR036390 Winged helix DNA-binding domain superfamily EP560_11955 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_11960 IPR023210 NADP-dependent oxidoreductase domain EP560_11960 IPR036812 NADP-dependent oxidoreductase domain superfamily EP560_11960 IPR020471 Aldo/keto reductase EP560_11975 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_11975 IPR018220 Adenylosuccinate synthase, GTP-binding site EP560_11975 IPR033128 Adenylosuccinate synthase, active site EP560_11975 IPR001114 Adenylosuccinate synthetase EP560_11975 IPR042109 Adenylosuccinate synthetase, domain 1 EP560_11975 IPR042111 Adenylosuccinate synthetase, domain 3 EP560_11975 IPR042110 Adenylosuccinate synthetase, domain 2 EP560_11980 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain EP560_11980 IPR004517 ATP phosphoribosyltransferase regulatory subunit EP560_11980 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit EP560_11985 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain EP560_11985 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site EP560_11985 IPR036291 NAD(P)-binding domain superfamily EP560_11985 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I EP560_11985 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family EP560_11985 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain EP560_11990 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain EP560_11990 IPR002318 Alanine-tRNA ligase, class IIc EP560_11990 IPR012947 Threonyl/alanyl tRNA synthetase, SAD EP560_11990 IPR009000 Translation protein, beta-barrel domain superfamily EP560_11990 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily EP560_11990 IPR003156 DHHA1 domain EP560_11990 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily EP560_11990 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria EP560_11990 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal EP560_11995 IPR027795 CASTOR, ACT domain EP560_11995 IPR036393 Acetylglutamate kinase-like superfamily EP560_11995 IPR002912 ACT domain EP560_11995 IPR041740 Aspartokinase catalytic domain EP560_11995 IPR001048 Aspartate/glutamate/uridylate kinase EP560_11995 IPR005260 Aspartate kinase, monofunctional class EP560_11995 IPR001341 Aspartate kinase EP560_11995 IPR018042 Aspartate kinase, conserved site EP560_12005 IPR032874 DDE domain EP560_12005 IPR012337 Ribonuclease H-like superfamily EP560_12005 IPR001584 Integrase, catalytic core EP560_12005 IPR036397 Ribonuclease H superfamily EP560_12015 IPR006531 Gp5 N-terminal EP560_12015 IPR037026 Vgr protein, OB-fold domain superfamily EP560_12015 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein EP560_12015 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset EP560_12015 IPR032074 Actin cross-linking domain EP560_12030 IPR004872 Lipoprotein NlpA family EP560_12035 IPR010295 Protein of unknown function DUF898 EP560_12050 IPR013785 Aldolase-type TIM barrel EP560_12050 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_12050 IPR023753 FAD/NAD(P)-binding domain EP560_12050 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal EP560_12055 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_12055 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail EP560_12055 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body EP560_12055 IPR023434 Argininosuccinate synthase, type 1 subfamily EP560_12055 IPR001518 Argininosuccinate synthase EP560_12055 IPR023437 Argininosuccinate synthase, type 2 subfamily EP560_12055 IPR018223 Argininosuccinate synthase, conserved site EP560_12060 IPR029016 GAF-like domain superfamily EP560_12060 IPR003018 GAF domain EP560_12060 IPR000160 GGDEF domain EP560_12060 IPR001633 EAL domain EP560_12060 IPR016132 Phytochrome chromophore attachment domain EP560_12060 IPR001294 Phytochrome EP560_12060 IPR035919 EAL domain superfamily EP560_12060 IPR013515 Phytochrome, central region EP560_12060 IPR029787 Nucleotide cyclase EP560_12065 IPR006680 Amidohydrolase-related EP560_12065 IPR004721 Dihydroorotase homodimeric type EP560_12065 IPR002195 Dihydroorotase, conserved site EP560_12065 IPR032466 Metal-dependent hydrolase EP560_12070 IPR005987 Ribonuclease T EP560_12070 IPR012337 Ribonuclease H-like superfamily EP560_12070 IPR036397 Ribonuclease H superfamily EP560_12070 IPR013520 Exonuclease, RNase T/DNA polymerase III EP560_12080 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_12080 IPR012910 TonB-dependent receptor, plug domain EP560_12080 IPR010105 TonB-dependent siderophore receptor EP560_12080 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP560_12080 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_12080 IPR039423 TonB-dependent receptor-like EP560_12085 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal EP560_12085 IPR013785 Aldolase-type TIM barrel EP560_12085 IPR023753 FAD/NAD(P)-binding domain EP560_12085 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_12090 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal EP560_12090 IPR017871 ABC transporter, conserved site EP560_12090 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_12090 IPR003593 AAA+ ATPase domain EP560_12090 IPR003439 ABC transporter-like EP560_12095 IPR025966 Oligopeptide transport permease C-like, N-terminal domain EP560_12095 IPR035906 MetI-like superfamily EP560_12095 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_12100 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_12100 IPR035906 MetI-like superfamily EP560_12105 IPR039424 Solute-binding protein family 5 EP560_12105 IPR000914 Solute-binding protein family 5 domain EP560_12105 IPR030678 Peptide/nickel binding protein, MppA-type EP560_12110 IPR036779 LysM domain superfamily EP560_12110 IPR008258 Transglycosylase SLT domain 1 EP560_12110 IPR036779 LysM domain superfamily EP560_12110 IPR018392 LysM domain EP560_12110 IPR023346 Lysozyme-like domain superfamily EP560_12110 IPR000189 Prokaryotic transglycosylase, active site EP560_12110 IPR008258 Transglycosylase SLT domain 1 EP560_12110 IPR018392 LysM domain EP560_12110 IPR000189 Prokaryotic transglycosylase, active site EP560_12110 IPR023346 Lysozyme-like domain superfamily EP560_12115 IPR013520 Exonuclease, RNase T/DNA polymerase III EP560_12115 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain EP560_12115 IPR006309 DNA polymerase 3, epsilon subunit EP560_12115 IPR036397 Ribonuclease H superfamily EP560_12115 IPR012337 Ribonuclease H-like superfamily EP560_12125 IPR015376 Zinc ribbon, NADH pyrophosphatase EP560_12125 IPR000086 NUDIX hydrolase domain EP560_12125 IPR020084 NUDIX hydrolase, conserved site EP560_12125 IPR015797 NUDIX hydrolase-like domain superfamily EP560_12125 IPR022925 NADH pyrophosphatase NudC EP560_12135 IPR007055 BON domain EP560_12135 IPR014004 Transport-associated and nodulation domain, bacteria EP560_12140 IPR011335 Restriction endonuclease type II-like EP560_12140 IPR011856 tRNA endonuclease-like domain superfamily EP560_12140 IPR003509 Uncharacterised protein family UPF0102 EP560_12145 IPR000878 Tetrapyrrole methylase EP560_12145 IPR018063 SAM-dependent methyltransferase RsmI, conserved site EP560_12145 IPR035996 Tetrapyrrole methylase superfamily EP560_12145 IPR014776 Tetrapyrrole methylase, subdomain 2 EP560_12145 IPR008189 rRNA small subunit methyltransferase I EP560_12145 IPR014777 Tetrapyrrole methylase, subdomain 1 EP560_12155 IPR036390 Winged helix DNA-binding domain superfamily EP560_12155 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_12155 IPR005119 LysR, substrate-binding EP560_12155 IPR017685 HTH-type transcriptional regulator ArgP EP560_12155 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria EP560_12155 IPR000847 Transcription regulator HTH, LysR EP560_12160 IPR023445 Arginine exporter protein ArgO, enterobacteria EP560_12160 IPR001123 Amino acid exporter protein, LeuE-type EP560_12160 IPR004777 L-lysine exporter/arginine exporter EP560_12170 IPR000551 MerR-type HTH domain EP560_12170 IPR011794 Hg(II)-responsive transcriptional regulator EP560_12170 IPR009061 Putative DNA-binding domain superfamily EP560_12180 IPR002938 FAD-binding domain EP560_12180 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 EP560_12180 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site EP560_12180 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_12185 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_12185 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site EP560_12185 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase EP560_12185 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 EP560_12185 IPR002938 FAD-binding domain EP560_12190 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal EP560_12190 IPR036005 Creatinase/aminopeptidase-like EP560_12190 IPR007865 Aminopeptidase P, N-terminal EP560_12190 IPR000994 Peptidase M24 EP560_12190 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site EP560_12240 IPR035069 TTHA1013/TTHA0281-like EP560_12240 IPR031807 HicB-like antitoxin of toxin-antitoxin system EP560_12535 IPR017926 Glutamine amidotransferase EP560_12535 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain EP560_12535 IPR029062 Class I glutamine amidotransferase-like EP560_12540 IPR014782 Peptidase M1, membrane alanine aminopeptidase EP560_12540 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase EP560_12540 IPR034016 Aminopeptidase N-type EP560_12540 IPR024571 ERAP1-like C-terminal domain EP560_12540 IPR042097 Aminopeptidase N-like , N-terminal EP560_12545 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP560_12545 IPR010101 TonB-dependent vitamin B12 transporter BtuB EP560_12545 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_12545 IPR010916 TonB box, conserved site EP560_12545 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_12545 IPR012910 TonB-dependent receptor, plug domain EP560_12545 IPR039426 Vitamin B12 transporter BtuB-like EP560_12545 IPR010917 TonB-dependent receptor, conserved site EP560_12550 IPR000312 Glycosyl transferase, family 3 EP560_12550 IPR017459 Glycosyl transferase family 3, N-terminal domain EP560_12550 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily EP560_12550 IPR005940 Anthranilate phosphoribosyl transferase EP560_12550 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily EP560_12555 IPR011060 Ribulose-phosphate binding barrel EP560_12555 IPR001468 Indole-3-glycerol phosphate synthase, conserved site EP560_12555 IPR013785 Aldolase-type TIM barrel EP560_12555 IPR013798 Indole-3-glycerol phosphate synthase EP560_12570 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead EP560_12570 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily EP560_12570 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding EP560_12570 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily EP560_12575 IPR012675 Beta-grasp domain superfamily EP560_12575 IPR036010 2Fe-2S ferredoxin-like superfamily EP560_12575 IPR002888 [2Fe-2S]-binding EP560_12575 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site EP560_12575 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP560_12575 IPR036884 [2Fe-2S]-binding domain superfamily EP560_12590 IPR001586 Beta-lactamase, class-C active site EP560_12590 IPR012338 Beta-lactamase/transpeptidase-like EP560_12590 IPR001466 Beta-lactamase-related EP560_12605 IPR008535 Protein of unknown function DUF817 EP560_12610 IPR006361 Uroporphyrinogen decarboxylase HemE EP560_12610 IPR038071 UROD/MetE-like superfamily EP560_12610 IPR000257 Uroporphyrinogen decarboxylase (URO-D) EP560_12620 IPR005801 ADC synthase EP560_12620 IPR004561 Isochorismate synthase EP560_12620 IPR015890 Chorismate-utilising enzyme, C-terminal EP560_12630 IPR001031 Thioesterase EP560_12630 IPR029058 Alpha/Beta hydrolase fold EP560_12630 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS EP560_12635 IPR003593 AAA+ ATPase domain EP560_12635 IPR011527 ABC transporter type 1, transmembrane domain EP560_12635 IPR036640 ABC transporter type 1, transmembrane domain superfamily EP560_12635 IPR003439 ABC transporter-like EP560_12635 IPR017871 ABC transporter, conserved site EP560_12635 IPR011917 ABC transporter, lipid A export, MsbA EP560_12635 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_12640 IPR036640 ABC transporter type 1, transmembrane domain superfamily EP560_12640 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_12640 IPR003593 AAA+ ATPase domain EP560_12640 IPR003439 ABC transporter-like EP560_12640 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC EP560_12640 IPR011527 ABC transporter type 1, transmembrane domain EP560_12650 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_12650 IPR015424 Pyridoxal phosphate-dependent transferase EP560_12650 IPR002129 Pyridoxal phosphate-dependent decarboxylase EP560_12650 IPR023523 Histidine decarboxylase, bacteria EP560_12650 IPR021115 Pyridoxal-phosphate binding site EP560_12655 IPR036736 ACP-like superfamily EP560_12655 IPR036380 Isochorismatase-like superfamily EP560_12655 IPR016291 Isochorismatase EP560_12655 IPR009081 Phosphopantetheine binding ACP domain EP560_12655 IPR000868 Isochorismatase-like EP560_12660 IPR042099 AMP-dependent synthetase-like superfamily EP560_12660 IPR000873 AMP-dependent synthetase/ligase EP560_12660 IPR011963 2,3-dihydroxybenzoate-AMP ligase EP560_12660 IPR025110 AMP-binding enzyme, C-terminal domain EP560_12660 IPR020845 AMP-binding, conserved site EP560_12665 IPR036736 ACP-like superfamily EP560_12665 IPR020845 AMP-binding, conserved site EP560_12665 IPR000873 AMP-dependent synthetase/ligase EP560_12665 IPR029058 Alpha/Beta hydrolase fold EP560_12665 IPR042099 AMP-dependent synthetase-like superfamily EP560_12665 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily EP560_12665 IPR001242 Condensation domain EP560_12665 IPR020806 Polyketide synthase, phosphopantetheine-binding domain EP560_12665 IPR009081 Phosphopantetheine binding ACP domain EP560_12665 IPR010071 Amino acid adenylation domain EP560_12665 IPR006162 Phosphopantetheine attachment site EP560_12670 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_12670 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase EP560_12670 IPR031043 Putative histamine N-monooxygenase EP560_12685 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_12685 IPR010105 TonB-dependent siderophore receptor EP560_12685 IPR012910 TonB-dependent receptor, plug domain EP560_12685 IPR010917 TonB-dependent receptor, conserved site EP560_12685 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP560_12685 IPR010916 TonB box, conserved site EP560_12685 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_12685 IPR039423 TonB-dependent receptor-like EP560_12685 IPR030149 TonB-dependent siderophore receptor FcuA/FatA EP560_12690 IPR033870 FatB domain EP560_12690 IPR002491 ABC transporter periplasmic binding domain EP560_12695 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_12695 IPR017871 ABC transporter, conserved site EP560_12695 IPR003593 AAA+ ATPase domain EP560_12695 IPR003439 ABC transporter-like EP560_12700 IPR000522 ABC transporter, permease protein, BtuC-like EP560_12700 IPR037294 ABC transporter, BtuC-like EP560_12705 IPR000522 ABC transporter, permease protein, BtuC-like EP560_12705 IPR037294 ABC transporter, BtuC-like EP560_12710 IPR001031 Thioesterase EP560_12710 IPR009081 Phosphopantetheine binding ACP domain EP560_12710 IPR020802 Polyketide synthase, thioesterase domain EP560_12710 IPR020806 Polyketide synthase, phosphopantetheine-binding domain EP560_12710 IPR001242 Condensation domain EP560_12710 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily EP560_12710 IPR000873 AMP-dependent synthetase/ligase EP560_12710 IPR020845 AMP-binding, conserved site EP560_12710 IPR025110 AMP-binding enzyme, C-terminal domain EP560_12710 IPR036736 ACP-like superfamily EP560_12710 IPR029058 Alpha/Beta hydrolase fold EP560_12710 IPR042099 AMP-dependent synthetase-like superfamily EP560_12710 IPR010071 Amino acid adenylation domain EP560_12715 IPR042099 AMP-dependent synthetase-like superfamily EP560_12715 IPR009081 Phosphopantetheine binding ACP domain EP560_12715 IPR006162 Phosphopantetheine attachment site EP560_12715 IPR036736 ACP-like superfamily EP560_12715 IPR025110 AMP-binding enzyme, C-terminal domain EP560_12715 IPR020845 AMP-binding, conserved site EP560_12715 IPR000873 AMP-dependent synthetase/ligase EP560_12715 IPR010071 Amino acid adenylation domain EP560_12715 IPR020806 Polyketide synthase, phosphopantetheine-binding domain EP560_12715 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily EP560_12715 IPR010060 Non-ribosomal peptide synthase EP560_12715 IPR001242 Condensation domain EP560_12725 IPR039445 Transcriptional regulator DauR-like, HTH domain EP560_12725 IPR039446 Transcriptional regulator DauR-like EP560_12725 IPR013559 YheO-like EP560_12735 IPR011051 RmlC-like cupin domain superfamily EP560_12735 IPR014710 RmlC-like jelly roll fold EP560_12735 IPR012093 Pirin EP560_12735 IPR003829 Pirin, N-terminal domain EP560_12735 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain EP560_12755 IPR009057 Homeobox-like domain superfamily EP560_12755 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP560_12755 IPR001647 DNA-binding HTH domain, TetR-type EP560_12760 IPR020807 Polyketide synthase, dehydratase domain EP560_12760 IPR042104 Polyketide synthase, dehydratase domain superfamily EP560_12760 IPR032821 Ketoacyl-synthetase, C-terminal extension EP560_12760 IPR013154 Alcohol dehydrogenase, N-terminal EP560_12760 IPR036291 NAD(P)-binding domain superfamily EP560_12760 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding EP560_12760 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain EP560_12760 IPR014031 Beta-ketoacyl synthase, C-terminal EP560_12760 IPR011032 GroES-like superfamily EP560_12760 IPR018201 Beta-ketoacyl synthase, active site EP560_12760 IPR020806 Polyketide synthase, phosphopantetheine-binding domain EP560_12760 IPR015083 Polyketide synthase, docking domain EP560_12760 IPR001227 Acyl transferase domain superfamily EP560_12760 IPR036736 ACP-like superfamily EP560_12760 IPR014043 Acyl transferase EP560_12760 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase EP560_12760 IPR009081 Phosphopantetheine binding ACP domain EP560_12760 IPR020843 Polyketide synthase, enoylreductase domain EP560_12760 IPR014030 Beta-ketoacyl synthase, N-terminal EP560_12760 IPR006162 Phosphopantetheine attachment site EP560_12760 IPR016039 Thiolase-like EP560_12760 IPR013968 Polyketide synthase, ketoreductase domain EP560_12760 IPR015357 Erythronolide synthase, docking EP560_12760 IPR036347 Erythronolide synthase, docking domain superfamily EP560_12765 IPR034620 cis-3-Hydroxy-L-proline dehydratase EP560_12765 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal EP560_12765 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain EP560_12765 IPR029065 Enolase C-terminal domain-like EP560_12765 IPR029017 Enolase-like, N-terminal EP560_12765 IPR036849 Enolase-like, C-terminal domain superfamily EP560_12770 IPR005829 Sugar transporter, conserved site EP560_12770 IPR036259 MFS transporter superfamily EP560_12770 IPR005828 Major facilitator, sugar transporter-like EP560_12770 IPR020846 Major facilitator superfamily domain EP560_12770 IPR003663 Sugar/inositol transporter EP560_12775 IPR036165 YefM-like superfamily EP560_12775 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM EP560_12785 IPR000620 EamA domain EP560_12805 IPR008471 MnmC-like methyltransferase EP560_12805 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC EP560_12805 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_12805 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal EP560_12805 IPR006076 FAD dependent oxidoreductase EP560_12810 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_12810 IPR023753 FAD/NAD(P)-binding domain EP560_12810 IPR041364 Rubredoxin binding domain EP560_12820 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP560_12820 IPR017941 Rieske [2Fe-2S] iron-sulphur domain EP560_12820 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site EP560_12820 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain EP560_12820 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit EP560_12825 IPR000060 BCCT transporter family EP560_12825 IPR018093 BCCT transporter, conserved site EP560_12830 IPR000060 BCCT transporter family EP560_12830 IPR018093 BCCT transporter, conserved site EP560_12835 IPR005119 LysR, substrate-binding EP560_12835 IPR000847 Transcription regulator HTH, LysR EP560_12835 IPR036390 Winged helix DNA-binding domain superfamily EP560_12835 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_12840 IPR004841 Amino acid permease/ SLC12A domain EP560_12840 IPR004840 Amino acid permease, conserved site EP560_12840 IPR011265 GABA permease EP560_12845 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_12845 IPR015590 Aldehyde dehydrogenase domain EP560_12845 IPR016161 Aldehyde/histidinol dehydrogenase EP560_12845 IPR010061 Methylmalonate-semialdehyde dehydrogenase EP560_12845 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_12845 IPR016160 Aldehyde dehydrogenase, cysteine active site EP560_12860 IPR029016 GAF-like domain superfamily EP560_12860 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal EP560_12860 IPR025736 PucR C-terminal helix-turn-helix domain EP560_12860 IPR042070 PucR C-terminal helix-turn-helix domain superfamily EP560_12860 IPR041522 CdaR, GGDEF-like domain EP560_12895 IPR007423 Selenoprotein, putative EP560_12900 IPR025299 CstA, C-terminal domain EP560_12900 IPR003706 CstA, N-terminal domain EP560_12905 IPR008991 Translation protein SH3-like domain superfamily EP560_12905 IPR015365 Elongation factor P, C-terminal EP560_12905 IPR012340 Nucleic acid-binding, OB-fold EP560_12905 IPR014722 Ribosomal protein L2, domain 2 EP560_12905 IPR020599 Translation elongation factor P/YeiP EP560_12905 IPR013185 Translation elongation factor, KOW-like EP560_12905 IPR011768 Translation elongation factor P EP560_12905 IPR001059 Translation elongation factor P/YeiP, central EP560_12910 IPR022462 Lysine-2,3-aminomutase-like EP560_12910 IPR007197 Radical SAM EP560_12910 IPR013785 Aldolase-type TIM barrel EP560_12910 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase EP560_12925 IPR034704 L28p-like EP560_12925 IPR042105 Ribosomal protein L31 superfamily EP560_12925 IPR002150 Ribosomal protein L31 EP560_12925 IPR027491 Ribosomal protein L31 type A EP560_12930 IPR038770 Sodium/solute symporter superfamily EP560_12930 IPR016833 Putative sodium bile acid cotransporter EP560_12935 IPR037523 Vicinal oxygen chelate (VOC) domain EP560_12935 IPR004361 Glyoxalase I EP560_12935 IPR018146 Glyoxalase I, conserved site EP560_12935 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase EP560_12935 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain EP560_12940 IPR036259 MFS transporter superfamily EP560_12940 IPR020846 Major facilitator superfamily domain EP560_12940 IPR011701 Major facilitator superfamily EP560_12940 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 EP560_12945 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_12945 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP560_12945 IPR008269 Peptidase S16, Lon proteolytic domain EP560_12945 IPR027065 Lon protease EP560_12945 IPR041699 Lon protease, AAA domain EP560_12950 IPR005119 LysR, substrate-binding EP560_12950 IPR000847 Transcription regulator HTH, LysR EP560_12950 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_12950 IPR036390 Winged helix DNA-binding domain superfamily EP560_12955 IPR036779 LysM domain superfamily EP560_12955 IPR011055 Duplicated hybrid motif EP560_12955 IPR016047 Peptidase M23 EP560_12955 IPR018392 LysM domain EP560_12960 IPR030048 Survival protein SurE EP560_12960 IPR002828 Survival protein SurE-like phosphatase/nucleotidase EP560_12960 IPR036523 SurE-like phosphatase/nucleotidase superfamily EP560_12975 IPR012338 Beta-lactamase/transpeptidase-like EP560_12975 IPR015956 Penicillin-binding protein, C-terminal domain superfamily EP560_12975 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal EP560_12975 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal EP560_12975 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A EP560_12975 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily EP560_12980 IPR011004 Trimeric LpxA-like superfamily EP560_12980 IPR001451 Hexapeptide repeat EP560_12985 IPR023214 HAD superfamily EP560_12985 IPR000086 NUDIX hydrolase domain EP560_12985 IPR020476 NUDIX hydrolase EP560_12985 IPR015797 NUDIX hydrolase-like domain superfamily EP560_12985 IPR020084 NUDIX hydrolase, conserved site EP560_12985 IPR036412 HAD-like superfamily EP560_12985 IPR006357 HAD-superfamily hydrolase, subfamily IIA EP560_12990 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_12990 IPR023382 Adenine nucleotide alpha hydrolase-like domains EP560_12990 IPR004506 tRNA-specific 2-thiouridylase EP560_12995 IPR007451 High frequency lysogenization protein HflD EP560_12995 IPR035932 HflD-like superfamily EP560_13000 IPR020557 Fumarate lyase, conserved site EP560_13000 IPR013539 Adenylosuccinate lyase PurB, C-terminal EP560_13000 IPR004769 Adenylosuccinate lyase EP560_13000 IPR024083 Fumarase/histidase, N-terminal EP560_13000 IPR008948 L-Aspartase-like EP560_13000 IPR000362 Fumarate lyase family EP560_13000 IPR022761 Fumarate lyase, N-terminal EP560_13015 IPR002142 Peptidase S49 EP560_13015 IPR013703 Peptidase S49, N-terminal proteobacteria EP560_13015 IPR029045 ClpP/crotonase-like domain superfamily EP560_13020 IPR017871 ABC transporter, conserved site EP560_13020 IPR005670 Phosphate transport system permease protein 1 EP560_13020 IPR003439 ABC transporter-like EP560_13020 IPR015850 ABC transporter, phosphate import, PstB EP560_13020 IPR003593 AAA+ ATPase domain EP560_13020 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_13025 IPR035906 MetI-like superfamily EP560_13025 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_13025 IPR005672 Phosphate transport system permease protein PstA EP560_13030 IPR035906 MetI-like superfamily EP560_13030 IPR011864 Phosphate ABC transporter, permease protein PstC EP560_13030 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_13035 IPR011862 Phosphate binding protein EP560_13035 IPR024370 PBP domain EP560_13040 IPR004840 Amino acid permease, conserved site EP560_13040 IPR004841 Amino acid permease/ SLC12A domain EP560_13045 IPR029061 Thiamin diphosphate-binding fold EP560_13045 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme EP560_13045 IPR012000 Thiamine pyrophosphate enzyme, central domain EP560_13045 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain EP560_13045 IPR029035 DHS-like NAD/FAD-binding domain superfamily EP560_13045 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding EP560_13050 IPR011991 ArsR-like helix-turn-helix domain EP560_13050 IPR000485 AsnC-type HTH domain EP560_13050 IPR011008 Dimeric alpha-beta barrel EP560_13050 IPR019888 Transcription regulator AsnC-type EP560_13050 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_13050 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP560_13050 IPR036390 Winged helix DNA-binding domain superfamily EP560_13050 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP560_13055 IPR015590 Aldehyde dehydrogenase domain EP560_13055 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP560_13055 IPR016160 Aldehyde dehydrogenase, cysteine active site EP560_13055 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_13055 IPR016161 Aldehyde/histidinol dehydrogenase EP560_13055 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_13060 IPR015424 Pyridoxal phosphate-dependent transferase EP560_13060 IPR021115 Pyridoxal-phosphate binding site EP560_13060 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_13060 IPR002129 Pyridoxal phosphate-dependent decarboxylase EP560_13065 IPR004637 2,4-diaminobutyrate 4-transaminase EP560_13065 IPR015424 Pyridoxal phosphate-dependent transferase EP560_13065 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_13065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_13065 IPR005814 Aminotransferase class-III EP560_13075 IPR001647 DNA-binding HTH domain, TetR-type EP560_13075 IPR023772 DNA-binding HTH domain, TetR-type, conserved site EP560_13075 IPR009057 Homeobox-like domain superfamily EP560_13075 IPR041347 MftR, C-terminal EP560_13085 IPR005804 Fatty acid desaturase domain EP560_13090 IPR017938 Riboflavin synthase-like beta-barrel EP560_13090 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP560_13090 IPR017927 FAD-binding domain, ferredoxin reductase-type EP560_13090 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain EP560_13090 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP560_13090 IPR012675 Beta-grasp domain superfamily EP560_13090 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP560_13090 IPR036010 2Fe-2S ferredoxin-like superfamily EP560_13090 IPR000951 Phthalate dioxygenase reductase EP560_13095 IPR009057 Homeobox-like domain superfamily EP560_13095 IPR023764 Transcriptional repressor HTH, FabR EP560_13095 IPR001647 DNA-binding HTH domain, TetR-type EP560_13105 IPR038718 SNF2-like, N-terminal domain superfamily EP560_13105 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP560_13105 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_13105 IPR023949 RNA polymerase-associated protein RapA EP560_13105 IPR001650 Helicase, C-terminal EP560_13105 IPR022737 RNA polymerase recycling, bacterial, C-terminal EP560_13105 IPR040766 RapA, N-terminal Tudor-like domain 2 EP560_13105 IPR040765 RapA, N-terminal Tudor like domain 1 EP560_13105 IPR000330 SNF2-related, N-terminal domain EP560_13110 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP560_13110 IPR006145 Pseudouridine synthase, RsuA/RluA EP560_13110 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site EP560_13120 IPR015424 Pyridoxal phosphate-dependent transferase EP560_13120 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_13120 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_13120 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase EP560_13120 IPR005814 Aminotransferase class-III EP560_13125 IPR022998 Thiamine phosphate synthase/TenI EP560_13125 IPR036206 Thiamin phosphate synthase superfamily EP560_13125 IPR034291 Thiamine phosphate synthase EP560_13125 IPR013785 Aldolase-type TIM barrel EP560_13150 IPR001431 Peptidase M16, zinc-binding site EP560_13150 IPR011765 Peptidase M16, N-terminal EP560_13150 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like EP560_13150 IPR007863 Peptidase M16, C-terminal EP560_13155 IPR003719 Phenazine biosynthesis PhzF protein EP560_13165 IPR036390 Winged helix DNA-binding domain superfamily EP560_13165 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_13165 IPR000847 Transcription regulator HTH, LysR EP560_13165 IPR005119 LysR, substrate-binding EP560_13170 IPR036259 MFS transporter superfamily EP560_13170 IPR010645 Uncharacterised MFS-type transporter YbfB EP560_13190 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site EP560_13190 IPR024084 Isopropylmalate dehydrogenase-like domain EP560_13190 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic EP560_13195 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP560_13195 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site EP560_13195 IPR006145 Pseudouridine synthase, RsuA/RluA EP560_13195 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F EP560_13195 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain EP560_13200 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric EP560_13210 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal EP560_13210 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A EP560_13210 IPR015956 Penicillin-binding protein, C-terminal domain superfamily EP560_13210 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily EP560_13210 IPR012338 Beta-lactamase/transpeptidase-like EP560_13210 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal EP560_13215 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_13215 IPR023753 FAD/NAD(P)-binding domain EP560_13220 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain EP560_13225 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain EP560_13225 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_13225 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily EP560_13225 IPR006050 DNA photolyase, N-terminal EP560_13225 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily EP560_13225 IPR002081 Cryptochrome/DNA photolyase class 1 EP560_13225 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal EP560_13240 IPR029044 Nucleotide-diphospho-sugar transferases EP560_13255 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like EP560_13255 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain EP560_13270 IPR004136 Nitronate monooxygenase EP560_13270 IPR013785 Aldolase-type TIM barrel EP560_13275 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal EP560_13275 IPR032887 tRNA-dihydrouridine synthase B EP560_13275 IPR035587 DUS-like, FMN-binding domain EP560_13275 IPR013785 Aldolase-type TIM barrel EP560_13275 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 EP560_13275 IPR001269 tRNA-dihydrouridine synthase EP560_13275 IPR018517 tRNA-dihydrouridine synthase, conserved site EP560_13280 IPR011673 Protein of unknown function DUF1615 EP560_13290 IPR001048 Aspartate/glutamate/uridylate kinase EP560_13290 IPR041739 Glutamate-5-kinase domain EP560_13290 IPR001057 Glutamate/acetylglutamate kinase EP560_13290 IPR011529 Glutamate 5-kinase EP560_13290 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase EP560_13290 IPR019797 Glutamate 5-kinase, conserved site EP560_13290 IPR002478 PUA domain EP560_13290 IPR015947 PUA-like superfamily EP560_13290 IPR036974 PUA domain superfamily EP560_13290 IPR036393 Acetylglutamate kinase-like superfamily EP560_13295 IPR006073 GTP binding domain EP560_13295 IPR006169 GTP1/OBG domain EP560_13295 IPR006074 GTP1/OBG, conserved site EP560_13295 IPR014100 GTP-binding protein Obg/CgtA EP560_13295 IPR035101 GTP-binding protein, Obg-type EP560_13295 IPR036726 GTP1/OBG domain superfamily EP560_13295 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_13295 IPR031167 OBG-type guanine nucleotide-binding (G) domain EP560_13320 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family EP560_13320 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain EP560_13320 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site EP560_13320 IPR036291 NAD(P)-binding domain superfamily EP560_13320 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I EP560_13320 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain EP560_13325 IPR004626 RarD protein EP560_13325 IPR000620 EamA domain EP560_13335 IPR036876 UVR domain superfamily EP560_13335 IPR004807 UvrABC system, subunit B EP560_13335 IPR006935 Helicase/UvrB, N-terminal EP560_13335 IPR001650 Helicase, C-terminal EP560_13335 IPR024759 UvrB, YAD/RRR-motif-containing domain EP560_13335 IPR041471 UvrB, interaction domain EP560_13335 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_13335 IPR001943 UVR domain EP560_13335 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP560_13345 IPR033416 Periplasmic sensor domain CHASE7 EP560_13345 IPR000160 GGDEF domain EP560_13345 IPR029787 Nucleotide cyclase EP560_13385 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_13385 IPR036291 NAD(P)-binding domain superfamily EP560_13385 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_13390 IPR009078 Ferritin-like superfamily EP560_13390 IPR010386 tRNA-hydroxylase MiaE EP560_13390 IPR012347 Ferritin-like EP560_13395 IPR013785 Aldolase-type TIM barrel EP560_13395 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ EP560_13395 IPR036130 Pyridoxine 5'-phosphate synthase EP560_13400 IPR003717 Recombination protein O, RecO EP560_13400 IPR012340 Nucleic acid-binding, OB-fold EP560_13400 IPR022572 DNA replication/recombination mediator RecO, N-terminal EP560_13400 IPR037278 ARFGAP/RecO-like zinc finger EP560_13410 IPR006073 GTP binding domain EP560_13410 IPR005225 Small GTP-binding protein domain EP560_13410 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_13410 IPR009019 K homology domain superfamily, prokaryotic type EP560_13410 IPR005662 GTP-binding protein Era EP560_13410 IPR015946 K homology domain-like, alpha/beta EP560_13410 IPR030388 Era-type guanine nucleotide-binding (G) domain EP560_13410 IPR004044 K Homology domain, type 2 EP560_13415 IPR011907 Ribonuclease III EP560_13415 IPR014720 Double-stranded RNA-binding domain EP560_13415 IPR036389 Ribonuclease III, endonuclease domain superfamily EP560_13415 IPR000999 Ribonuclease III domain EP560_13425 IPR036286 LexA/Signal peptidase-like superfamily EP560_13425 IPR000223 Peptidase S26A, signal peptidase I EP560_13425 IPR019756 Peptidase S26A, signal peptidase I, serine active site EP560_13425 IPR019533 Peptidase S26 EP560_13425 IPR019758 Peptidase S26A, signal peptidase I, conserved site EP560_13425 IPR019757 Peptidase S26A, signal peptidase I, lysine active site EP560_13430 IPR035647 EF-G domain III/V-like EP560_13430 IPR000640 Elongation factor EFG, domain V-like EP560_13430 IPR005225 Small GTP-binding protein domain EP560_13430 IPR000795 Transcription factor, GTP-binding domain EP560_13430 IPR004161 Translation elongation factor EFTu-like, domain 2 EP560_13430 IPR035654 Elongation factor 4, domain IV EP560_13430 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_13430 IPR013842 GTP-binding protein LepA, C-terminal EP560_13430 IPR038363 LepA, C-terminal domain superfamily EP560_13430 IPR031157 Tr-type G domain, conserved site EP560_13430 IPR006297 Elongation factor 4 EP560_13440 IPR001940 Peptidase S1C EP560_13440 IPR011782 Peptidase S1C, Do EP560_13440 IPR036034 PDZ superfamily EP560_13440 IPR001478 PDZ domain EP560_13440 IPR009003 Peptidase S1, PA clan EP560_13445 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_13445 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily EP560_13445 IPR005288 L-aspartate oxidase EP560_13445 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal EP560_13445 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily EP560_13445 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain EP560_13455 IPR039430 Thymidylate kinase-like domain EP560_13455 IPR018094 Thymidylate kinase EP560_13455 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_13460 IPR003770 Endolytic murein transglycosylase EP560_13465 IPR001544 Aminotransferase class IV EP560_13465 IPR036038 Aminotransferase-like, PLP-dependent enzymes EP560_13465 IPR017824 Aminodeoxychorismate lyase, class IV EP560_13465 IPR018300 Aminotransferase, class IV, conserved site EP560_13470 IPR000957 Sulphate/thiosulphate-binding, conserved site EP560_13470 IPR034408 Sulphate/thiosulphate-binding site EP560_13470 IPR005669 Thiosulphate/Sulfate-binding protein EP560_13480 IPR035906 MetI-like superfamily EP560_13480 IPR005667 Sulphate ABC transporter permease protein 2 EP560_13480 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_13480 IPR011865 Sulphate ABC transporter, permease protein CysT EP560_13485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_13485 IPR035906 MetI-like superfamily EP560_13485 IPR005667 Sulphate ABC transporter permease protein 2 EP560_13485 IPR011866 Sulphate ABC transporter, permease protein CysW EP560_13490 IPR024765 TOBE-like domain EP560_13490 IPR003593 AAA+ ATPase domain EP560_13490 IPR003439 ABC transporter-like EP560_13490 IPR017871 ABC transporter, conserved site EP560_13490 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal EP560_13490 IPR005666 Sulphate transport system permease protein 1 EP560_13490 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_13490 IPR008995 Molybdate/tungstate binding, C-terminal EP560_13495 IPR005119 LysR, substrate-binding EP560_13495 IPR000847 Transcription regulator HTH, LysR EP560_13495 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_13495 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain EP560_13495 IPR036390 Winged helix DNA-binding domain superfamily EP560_13505 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily EP560_13505 IPR011004 Trimeric LpxA-like superfamily EP560_13505 IPR018357 Hexapeptide transferase, conserved site EP560_13505 IPR001451 Hexapeptide repeat EP560_13505 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 EP560_13505 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family EP560_13510 IPR024924 7-carboxy-7-deazaguanine synthase-like EP560_13510 IPR013785 Aldolase-type TIM barrel EP560_13510 IPR007197 Radical SAM EP560_13515 IPR018317 Queuosine biosynthesis protein QueC EP560_13515 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_13530 IPR013766 Thioredoxin domain EP560_13530 IPR036249 Thioredoxin-like superfamily EP560_13530 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant EP560_13540 IPR004821 Cytidyltransferase-like domain EP560_13540 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain EP560_13540 IPR015797 NUDIX hydrolase-like domain superfamily EP560_13540 IPR020084 NUDIX hydrolase, conserved site EP560_13540 IPR000086 NUDIX hydrolase domain EP560_13540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_13545 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB EP560_13545 IPR014748 Enoyl-CoA hydratase, C-terminal EP560_13545 IPR029045 ClpP/crotonase-like domain superfamily EP560_13545 IPR001753 Enoyl-CoA hydratase/isomerase EP560_13550 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria EP560_13550 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily EP560_13550 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal EP560_13550 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 EP560_13555 IPR020846 Major facilitator superfamily domain EP560_13555 IPR036259 MFS transporter superfamily EP560_13555 IPR004812 Drug resistance transporter Bcr/CmlA subfamily EP560_13555 IPR011701 Major facilitator superfamily EP560_13560 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily EP560_13560 IPR036921 PurM-like, N-terminal domain superfamily EP560_13560 IPR036676 PurM-like, C-terminal domain superfamily EP560_13560 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain EP560_13560 IPR010073 Phosphoribosylformylglycinamidine synthase PurL EP560_13560 IPR017926 Glutamine amidotransferase EP560_13560 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal EP560_13560 IPR029062 Class I glutamine amidotransferase-like EP560_13560 IPR010918 PurM-like, C-terminal domain EP560_13565 IPR003607 HD/PDEase domain EP560_13565 IPR006674 HD domain EP560_13565 IPR023024 dNTP triphosphohydrolase, type 3 EP560_13565 IPR006261 dNTP triphosphohydrolase EP560_13565 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal EP560_13565 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily EP560_13570 IPR010994 RuvA domain 2-like EP560_13570 IPR000085 Bacterial DNA recombination protein RuvA EP560_13570 IPR012340 Nucleic acid-binding, OB-fold EP560_13570 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 EP560_13570 IPR036267 RuvA, C-terminal domain superfamily EP560_13570 IPR011114 Holliday junction DNA helicase RuvA, C-terminal EP560_13570 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial EP560_13575 IPR003593 AAA+ ATPase domain EP560_13575 IPR008823 RuvB C-terminal winged helix domain EP560_13575 IPR041445 RuvB, AAA lid domain EP560_13575 IPR004605 DNA helicase, Holliday junction RuvB-type EP560_13575 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_13575 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_13575 IPR008824 RuvB-like P-loop domain EP560_13575 IPR036390 Winged helix DNA-binding domain superfamily EP560_13580 IPR002933 Peptidase M20 EP560_13580 IPR011650 Peptidase M20, dimerisation domain EP560_13580 IPR036264 Bacterial exopeptidase dimerisation domain EP560_13580 IPR017439 Amidohydrolase EP560_13585 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site EP560_13585 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family EP560_13585 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase EP560_13585 IPR006683 Thioesterase domain EP560_13585 IPR029069 HotDog domain superfamily EP560_13590 IPR014163 Tol-Pal system, TolQ EP560_13590 IPR002898 MotA/TolQ/ExbB proton channel EP560_13595 IPR003400 Biopolymer transport protein ExbD/TolR EP560_13595 IPR014168 Tol-Pal system protein TolR EP560_13605 IPR011042 Six-bladed beta-propeller, TolB-like EP560_13605 IPR007195 TolB, N-terminal EP560_13605 IPR011659 WD40-like Beta Propeller EP560_13605 IPR014167 Tol-Pal system protein TolB EP560_13605 IPR036752 TolB, N-terminal domain superfamily EP560_13610 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal EP560_13610 IPR039001 Peptidoglycan-associated lipoprotein EP560_13610 IPR036737 OmpA-like domain superfamily EP560_13610 IPR006690 Outer membrane protein, OmpA-like, conserved site EP560_13610 IPR006665 OmpA-like domain EP560_13610 IPR006664 Outer membrane protein, bacterial EP560_13620 IPR000146 Fructose-1,6-bisphosphatase class 1 EP560_13620 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal EP560_13620 IPR028343 Fructose-1,6-bisphosphatase EP560_13625 IPR029028 Alpha/beta knot methyltransferases EP560_13625 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal EP560_13625 IPR013123 RNA 2-O ribose methyltransferase, substrate binding EP560_13625 IPR001537 tRNA/rRNA methyltransferase, SpoU type EP560_13625 IPR029064 50S ribosomal protein L30e-like EP560_13665 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_13665 IPR010921 Trp repressor/replication initiator EP560_13665 IPR001957 Chromosomal replication control, initiator DnaA EP560_13665 IPR020591 Chromosomal replication control, initiator DnaA-like EP560_13665 IPR018312 Chromosomal replication control, initiator DnaA, conserved site EP560_13665 IPR013159 Chromosomal replication initiator, DnaA C-terminal EP560_13665 IPR024633 DnaA N-terminal domain EP560_13665 IPR038454 DnaA, N-terminal domain superfamily EP560_13665 IPR003593 AAA+ ATPase domain EP560_13665 IPR013317 Chromosomal replication initiator protein DnaA EP560_13670 IPR002549 Transmembrane protein TqsA-like EP560_13675 IPR036676 PurM-like, C-terminal domain superfamily EP560_13675 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase EP560_13675 IPR010918 PurM-like, C-terminal domain EP560_13675 IPR016188 PurM-like, N-terminal domain EP560_13675 IPR036921 PurM-like, N-terminal domain superfamily EP560_13680 IPR004607 Phosphoribosylglycinamide formyltransferase EP560_13680 IPR036477 Formyl transferase, N-terminal domain superfamily EP560_13680 IPR001555 Phosphoribosylglycinamide formyltransferase, active site EP560_13680 IPR002376 Formyl transferase, N-terminal EP560_13685 IPR029058 Alpha/Beta hydrolase fold EP560_13685 IPR000073 Alpha/beta hydrolase fold-1 EP560_13690 IPR029045 ClpP/crotonase-like domain superfamily EP560_13690 IPR002142 Peptidase S49 EP560_13690 IPR004670 Na+/H+ antiporter NhaA EP560_13690 IPR023171 Na/H antiporter domain superfamily EP560_13700 IPR035681 ComA-like, MBL domain EP560_13700 IPR004477 ComEC/Rec2-related protein EP560_13700 IPR025405 Domain of unknown function DUF4131 EP560_13700 IPR001279 Metallo-beta-lactamase EP560_13700 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP560_13700 IPR004797 Competence protein ComEC/Rec2 EP560_13705 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_13705 IPR015854 ABC transporter, lipoprotein release, LolD EP560_13705 IPR017871 ABC transporter, conserved site EP560_13705 IPR003439 ABC transporter-like EP560_13705 IPR003593 AAA+ ATPase domain EP560_13710 IPR003838 ABC transporter permease protein domain EP560_13710 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E EP560_13710 IPR025857 MacB-like periplasmic core domain EP560_13720 IPR003791 Protein of unknown function UPF0178 EP560_13730 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_13730 IPR015424 Pyridoxal phosphate-dependent transferase EP560_13730 IPR022278 Phosphoserine aminotransferase EP560_13730 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site EP560_13730 IPR000192 Aminotransferase class V domain EP560_13730 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_13740 IPR039562 Membrane fusion protein, biotin-lipoyl like domain EP560_13760 IPR001173 Glycosyltransferase 2-like EP560_13760 IPR029044 Nucleotide-diphospho-sugar transferases EP560_13775 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily EP560_13775 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta EP560_13775 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal EP560_13775 IPR013760 DNA topoisomerase, type IIA-like domain superfamily EP560_13775 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal EP560_13775 IPR005743 DNA gyrase, subunit A EP560_13775 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat EP560_13780 IPR029035 DHS-like NAD/FAD-binding domain superfamily EP560_13780 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal EP560_13780 IPR001308 Electron transfer flavoprotein alpha subunit/FixB EP560_13780 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site EP560_13780 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_13780 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal EP560_13780 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal EP560_13785 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal EP560_13785 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal EP560_13785 IPR012255 Electron transfer flavoprotein, beta subunit EP560_13785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_13785 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site EP560_13790 IPR023009 Tyrosine recombinase XerC/XerD EP560_13790 IPR011931 Tyrosine recombinase XerC EP560_13790 IPR004107 Integrase, SAM-like, N-terminal EP560_13790 IPR002104 Integrase, catalytic domain EP560_13790 IPR013762 Integrase-like, catalytic domain superfamily EP560_13790 IPR011010 DNA breaking-rejoining enzyme, catalytic core EP560_13790 IPR010998 Integrase/recombinase, N-terminal EP560_13795 IPR004778 Homoserine/Threonine efflux protein EP560_13795 IPR001123 Amino acid exporter protein, LeuE-type EP560_13800 IPR001653 Diaminopimelate epimerase, DapF EP560_13800 IPR018510 Diaminopimelate epimerase, active site EP560_13805 IPR000183 Ornithine/DAP/Arg decarboxylase EP560_13805 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site EP560_13805 IPR002986 Diaminopimelate decarboxylase, LysA EP560_13805 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal EP560_13805 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site EP560_13805 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal EP560_13805 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal EP560_13805 IPR029066 PLP-binding barrel EP560_13815 IPR004841 Amino acid permease/ SLC12A domain EP560_13815 IPR004840 Amino acid permease, conserved site EP560_13820 IPR003593 AAA+ ATPase domain EP560_13820 IPR004504 DNA repair protein RadA EP560_13820 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain EP560_13820 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_13820 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_13820 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP560_13820 IPR041166 LapB, rubredoxin metal binding domain EP560_13830 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal EP560_13830 IPR006195 Aminoacyl-tRNA synthetase, class II EP560_13830 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) EP560_13830 IPR004525 Elongation factor P--(R)-beta-lysine ligase EP560_13835 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain EP560_13835 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain EP560_13835 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EP560_13835 IPR020921 Erythronate-4-phosphate dehydrogenase EP560_13835 IPR036291 NAD(P)-binding domain superfamily EP560_13835 IPR038251 PdxB, dimerisation domain superfamily EP560_13835 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 EP560_13840 IPR010652 Domain of unknown function DUF1232 EP560_13845 IPR003786 Sulfur carrier protein FdhD EP560_13845 IPR016193 Cytidine deaminase-like EP560_13850 IPR009010 Aspartate decarboxylase-like domain superfamily EP560_13850 IPR037951 YdeP-like, MopB domain EP560_13850 IPR006656 Molybdopterin oxidoreductase EP560_13850 IPR010046 Oxidoreductase alpha (molybdopterin) subunit EP560_13850 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain EP560_13855 IPR018197 Glycerate kinase, restriction-enzyme-like fold EP560_13855 IPR018193 Glycerate kinase, flavodoxin-like fold EP560_13855 IPR004381 Glycerate kinase EP560_13855 IPR036129 Glycerate kinase superfamily EP560_13865 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_13865 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_13865 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase EP560_13865 IPR036291 NAD(P)-binding domain superfamily EP560_13870 IPR029479 Nitroreductase EP560_13870 IPR000415 Nitroreductase-like EP560_13895 IPR036397 Ribonuclease H superfamily EP560_13895 IPR012337 Ribonuclease H-like superfamily EP560_13895 IPR025246 Transposase IS30-like HTH domain EP560_13895 IPR001584 Integrase, catalytic core EP560_13895 IPR001598 Transposase, IS30, conserved site EP560_13905 IPR020845 AMP-binding, conserved site EP560_13905 IPR025110 AMP-binding enzyme, C-terminal domain EP560_13905 IPR036736 ACP-like superfamily EP560_13905 IPR000873 AMP-dependent synthetase/ligase EP560_13905 IPR029058 Alpha/Beta hydrolase fold EP560_13905 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily EP560_13905 IPR001242 Condensation domain EP560_13905 IPR020806 Polyketide synthase, phosphopantetheine-binding domain EP560_13905 IPR020802 Polyketide synthase, thioesterase domain EP560_13905 IPR009081 Phosphopantetheine binding ACP domain EP560_13905 IPR010071 Amino acid adenylation domain EP560_13905 IPR001031 Thioesterase EP560_13905 IPR042099 AMP-dependent synthetase-like superfamily EP560_13920 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal EP560_13920 IPR018151 Transcription elongation factor, GreA/GreB, conserved site EP560_13920 IPR023459 Transcription elongation factor GreA/GreB family EP560_13920 IPR006358 Transcription elongation factor GreB EP560_13920 IPR028624 Transcription elongation factor GreA/GreB EP560_13920 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily EP560_13920 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal EP560_13920 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily EP560_13925 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP560_13925 IPR000189 Prokaryotic transglycosylase, active site EP560_13925 IPR023346 Lysozyme-like domain superfamily EP560_13925 IPR023703 Membrane-bound lytic murein transglycosylase F EP560_13925 IPR008258 Transglycosylase SLT domain 1 EP560_13935 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal EP560_13935 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_13935 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase EP560_13935 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type EP560_13945 IPR023346 Lysozyme-like domain superfamily EP560_13945 IPR008258 Transglycosylase SLT domain 1 EP560_13945 IPR000189 Prokaryotic transglycosylase, active site EP560_13950 IPR001915 Peptidase M48 EP560_13950 IPR022919 Peptidase M48, protease HtpX, putative EP560_13960 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 EP560_13960 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains EP560_13960 IPR001036 Acriflavin resistance protein EP560_13965 IPR030395 Glycerophosphodiester phosphodiesterase domain EP560_13965 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily EP560_13970 IPR001279 Metallo-beta-lactamase EP560_13970 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP560_13975 IPR000829 DAGK family EP560_13975 IPR033718 Diacylglycerol kinase, prokaryotic EP560_13975 IPR036945 Diacylglycerol kinase (DAGK) superfamily EP560_13980 IPR018370 Chaperonin Cpn60, conserved site EP560_13980 IPR002423 Chaperonin Cpn60/TCP-1 family EP560_13980 IPR027409 GroEL-like apical domain superfamily EP560_13980 IPR027413 GroEL-like equatorial domain superfamily EP560_13980 IPR027410 TCP-1-like chaperonin intermediate domain superfamily EP560_13980 IPR001844 Chaperonin Cpn60 EP560_13985 IPR018369 Chaperonin GroES, conserved site EP560_13985 IPR011032 GroES-like superfamily EP560_13985 IPR020818 GroES chaperonin family EP560_13985 IPR037124 GroES chaperonin superfamily EP560_13995 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type EP560_13995 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA EP560_13995 IPR042281 GpdQ, beta-strand dimerisation domain EP560_13995 IPR042283 GpdQ, catalytic alpha/beta sandwich domain EP560_14000 IPR001206 Diacylglycerol kinase, catalytic domain EP560_14000 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily EP560_14000 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal EP560_14000 IPR005218 Diacylglycerol/lipid kinase EP560_14005 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site EP560_14005 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal EP560_14005 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising EP560_14005 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain EP560_14005 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal EP560_14005 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal EP560_14010 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_14010 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily EP560_14010 IPR031656 Alpha-glycerophosphate oxidase, C-terminal EP560_14010 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase EP560_14010 IPR006076 FAD dependent oxidoreductase EP560_14015 IPR005999 Glycerol kinase EP560_14015 IPR018484 Carbohydrate kinase, FGGY, N-terminal EP560_14015 IPR000577 Carbohydrate kinase, FGGY EP560_14015 IPR018485 Carbohydrate kinase, FGGY, C-terminal EP560_14015 IPR018483 Carbohydrate kinase, FGGY, conserved site EP560_14020 IPR020846 Major facilitator superfamily domain EP560_14020 IPR005828 Major facilitator, sugar transporter-like EP560_14020 IPR004736 MFS transporter, metabolite:H symporter EP560_14020 IPR005829 Sugar transporter, conserved site EP560_14020 IPR036259 MFS transporter superfamily EP560_14030 IPR004498 Ribosomal protein L11 methyltransferase EP560_14030 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_14035 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EP560_14035 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EP560_14035 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site EP560_14035 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase EP560_14035 IPR036291 NAD(P)-binding domain superfamily EP560_14050 IPR032093 Phospholipase D, N-terminal EP560_14050 IPR008963 Purple acid phosphatase-like, N-terminal EP560_14050 IPR006311 Twin-arginine translocation pathway, signal sequence EP560_14050 IPR038607 PhoD-like superfamily EP560_14050 IPR018946 Alkaline phosphatase D-related EP560_14075 IPR000489 Pterin-binding domain EP560_14075 IPR011005 Dihydropteroate synthase-like EP560_14075 IPR006390 Dihydropteroate synthase EP560_14080 IPR011546 Peptidase M41, FtsH extracellular EP560_14080 IPR003593 AAA+ ATPase domain EP560_14080 IPR003960 ATPase, AAA-type, conserved site EP560_14080 IPR005936 Peptidase, FtsH EP560_14080 IPR003959 ATPase, AAA-type, core EP560_14080 IPR041569 AAA ATPase, AAA+ lid domain EP560_14080 IPR000642 Peptidase M41 EP560_14080 IPR037219 Peptidase M41-like EP560_14080 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_14085 IPR015507 Ribosomal RNA large subunit methyltransferase E EP560_14085 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_14085 IPR002877 Ribosomal RNA methyltransferase FtsJ domain EP560_14090 IPR001890 RNA-binding, CRM domain EP560_14090 IPR017924 RNA-binding protein YhbY EP560_14090 IPR035920 YhbY-like superfamily EP560_14105 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain EP560_14105 IPR006274 Carbamoyl-phosphate synthase, small subunit EP560_14105 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain EP560_14105 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily EP560_14105 IPR017926 Glutamine amidotransferase EP560_14105 IPR029062 Class I glutamine amidotransferase-like EP560_14110 IPR011761 ATP-grasp fold EP560_14110 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain EP560_14110 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily EP560_14110 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain EP560_14110 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain EP560_14110 IPR011607 Methylglyoxal synthase-like domain EP560_14110 IPR036914 Methylglyoxal synthase-like domain superfamily EP560_14110 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain EP560_14110 IPR016185 Pre-ATP-grasp domain superfamily EP560_14110 IPR006275 Carbamoyl-phosphate synthase, large subunit EP560_14115 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily EP560_14115 IPR023459 Transcription elongation factor GreA/GreB family EP560_14115 IPR028624 Transcription elongation factor GreA/GreB EP560_14115 IPR006359 Transcription elongation factor GreA EP560_14115 IPR018151 Transcription elongation factor, GreA/GreB, conserved site EP560_14115 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal EP560_14115 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily EP560_14115 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal EP560_14120 IPR001451 Hexapeptide repeat EP560_14120 IPR018357 Hexapeptide transferase, conserved site EP560_14120 IPR011004 Trimeric LpxA-like superfamily EP560_14125 IPR006016 UspA EP560_14125 IPR006015 Universal stress protein A family EP560_14125 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_14130 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_14130 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding EP560_14130 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain EP560_14140 IPR029052 Metallo-dependent phosphatase-like EP560_14140 IPR019079 Capsule synthesis protein, CapA EP560_14155 IPR018422 Cation/H+ exchanger, CPA1 family EP560_14155 IPR006153 Cation/H+ exchanger EP560_14155 IPR038770 Sodium/solute symporter superfamily EP560_14160 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative EP560_14165 IPR008526 Inner membrane protein YedI EP560_14170 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site EP560_14170 IPR002305 Aminoacyl-tRNA synthetase, class Ic EP560_14170 IPR024109 Tryptophan-tRNA ligase, bacterial-type EP560_14170 IPR002306 Tryptophan-tRNA ligase EP560_14170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_14175 IPR003781 CoA-binding EP560_14175 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site EP560_14175 IPR016102 Succinyl-CoA synthetase-like EP560_14175 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site EP560_14175 IPR005810 Succinyl-CoA ligase, alpha subunit EP560_14175 IPR005811 ATP-citrate lyase/succinyl-CoA ligase EP560_14175 IPR036291 NAD(P)-binding domain superfamily EP560_14180 IPR011761 ATP-grasp fold EP560_14180 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type EP560_14180 IPR013815 ATP-grasp fold, subdomain 1 EP560_14180 IPR005811 ATP-citrate lyase/succinyl-CoA ligase EP560_14180 IPR005809 Succinate--CoA synthetase, beta subunit EP560_14180 IPR016102 Succinyl-CoA synthetase-like EP560_14180 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site EP560_14185 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I EP560_14185 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EP560_14185 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily EP560_14185 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site EP560_14185 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_14185 IPR023753 FAD/NAD(P)-binding domain EP560_14185 IPR006258 Dihydrolipoamide dehydrogenase EP560_14190 IPR036625 E3-binding domain superfamily EP560_14190 IPR011053 Single hybrid motif EP560_14190 IPR006255 Dihydrolipoamide succinyltransferase EP560_14190 IPR004167 Peripheral subunit-binding domain EP560_14190 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site EP560_14190 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain EP560_14190 IPR000089 Biotin/lipoyl attachment EP560_14190 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily EP560_14195 IPR001017 Dehydrogenase, E1 component EP560_14195 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal EP560_14195 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily EP560_14195 IPR029061 Thiamin diphosphate-binding fold EP560_14195 IPR005475 Transketolase-like, pyrimidine-binding domain EP560_14195 IPR011603 2-oxoglutarate dehydrogenase E1 component EP560_14195 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain EP560_14210 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site EP560_14210 IPR036010 2Fe-2S ferredoxin-like superfamily EP560_14210 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein EP560_14210 IPR009051 Alpha-helical ferredoxin EP560_14210 IPR012675 Beta-grasp domain superfamily EP560_14210 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP560_14210 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal EP560_14210 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain EP560_14215 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain EP560_14215 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit EP560_14215 IPR011281 Succinate dehydrogenase, flavoprotein subunit EP560_14215 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily EP560_14215 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal EP560_14215 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily EP560_14215 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_14215 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site EP560_14220 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit EP560_14220 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor EP560_14220 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit EP560_14225 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site EP560_14225 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit EP560_14225 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit EP560_14225 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit EP560_14230 IPR016142 Citrate synthase-like, large alpha subdomain EP560_14230 IPR010953 Citrate synthase, type I EP560_14230 IPR036969 Citrate synthase superfamily EP560_14230 IPR024176 Citrate synthase, bacterial-type EP560_14230 IPR019810 Citrate synthase active site EP560_14230 IPR002020 Citrate synthase EP560_14230 IPR016143 Citrate synthase-like, small alpha subdomain EP560_14260 IPR009042 RNA polymerase sigma-70 region 1.2 EP560_14260 IPR000943 RNA polymerase sigma-70 EP560_14260 IPR007627 RNA polymerase sigma-70 region 2 EP560_14260 IPR007624 RNA polymerase sigma-70 region 3 EP560_14260 IPR007630 RNA polymerase sigma-70 region 4 EP560_14260 IPR014284 RNA polymerase sigma-70 like domain EP560_14260 IPR007127 RNA polymerase sigma factor 70, region 1.1 EP560_14260 IPR042189 Sigma-70 factor, region 1.1 superfamily EP560_14260 IPR013325 RNA polymerase sigma factor, region 2 EP560_14260 IPR013324 RNA polymerase sigma factor, region 3/4-like EP560_14260 IPR012760 RNA polymerase sigma factor RpoD, C-terminal EP560_14260 IPR028630 RNA polymerase sigma factor RpoD EP560_14260 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_14260 IPR007631 RNA polymerase sigma factor 70, non-essential domain EP560_14265 IPR007454 Uncharacterised protein family UPF0250 EP560_14265 IPR027471 YbeD-like domain superfamily EP560_14270 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain EP560_14270 IPR000544 Octanoyltransferase EP560_14270 IPR020605 Octanoyltransferase, conserved site EP560_14280 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA EP560_14280 IPR018211 Alcohol dehydrogenase, iron-type, conserved site EP560_14280 IPR039697 Iron-type alcohol dehydrogenase-like EP560_14285 IPR002293 Amino acid/polyamine transporter I EP560_14290 IPR008254 Flavodoxin/nitric oxide synthase EP560_14290 IPR005025 NADPH-dependent FMN reductase-like EP560_14290 IPR029039 Flavoprotein-like superfamily EP560_14295 IPR036390 Winged helix DNA-binding domain superfamily EP560_14295 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_14295 IPR002577 Helix-turn-helix, HxlR type EP560_14300 IPR001537 tRNA/rRNA methyltransferase, SpoU type EP560_14300 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal EP560_14300 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase EP560_14300 IPR029028 Alpha/beta knot methyltransferases EP560_14305 IPR019478 Sirohaem synthase, dimerisation domain EP560_14305 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site EP560_14305 IPR000878 Tetrapyrrole methylase EP560_14305 IPR035996 Tetrapyrrole methylase superfamily EP560_14305 IPR014777 Tetrapyrrole methylase, subdomain 1 EP560_14305 IPR006367 Sirohaem synthase, N-terminal EP560_14305 IPR014776 Tetrapyrrole methylase, subdomain 2 EP560_14305 IPR028281 Siroheme synthase, central domain EP560_14305 IPR012409 Sirohaem synthase EP560_14305 IPR037115 Sirohaem synthase, dimerisation domain superfamily EP560_14305 IPR036291 NAD(P)-binding domain superfamily EP560_14305 IPR006366 Uroporphyrin-III C-methyltransferase EP560_14310 IPR015866 Serine-tRNA synthetase, type1, N-terminal EP560_14310 IPR033729 Serine-tRNA ligase catalytic core domain EP560_14310 IPR006195 Aminoacyl-tRNA synthetase, class II EP560_14310 IPR002317 Serine-tRNA ligase, type1 EP560_14310 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily EP560_14310 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) EP560_14310 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm EP560_14320 IPR004564 Outer membrane lipoprotein carrier protein LolA-like EP560_14320 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria EP560_14320 IPR029046 Lipoprotein localisation LolA/LolB/LppX EP560_14325 IPR001684 Ribosomal protein L27 EP560_14325 IPR018261 Ribosomal protein L27, conserved site EP560_14330 IPR018258 Ribosomal protein L21, conserved site EP560_14330 IPR001787 Ribosomal protein L21 EP560_14330 IPR028909 Ribosomal protein L21-like EP560_14330 IPR036164 L21-like superfamily EP560_14340 IPR000092 Polyprenyl synthetase EP560_14340 IPR033749 Polyprenyl synthetase, conserved site EP560_14340 IPR008949 Isoprenoid synthase domain superfamily EP560_14350 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily EP560_14350 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase EP560_14355 IPR006143 RND efflux pump, membrane fusion protein EP560_14355 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain EP560_14360 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains EP560_14360 IPR001036 Acriflavin resistance protein EP560_14360 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 EP560_14365 IPR003423 Outer membrane efflux protein EP560_14365 IPR010131 RND efflux system, outer membrane lipoprotein, NodT EP560_14370 IPR002765 Uncharacterised protein family UPF0145 EP560_14370 IPR035439 UPF0145 domain superfamily EP560_14375 IPR002765 Uncharacterised protein family UPF0145 EP560_14375 IPR035439 UPF0145 domain superfamily EP560_14385 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_14385 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_14385 IPR036291 NAD(P)-binding domain superfamily EP560_14385 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase EP560_14395 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm EP560_14395 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding EP560_14395 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm EP560_14395 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_14395 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding EP560_14395 IPR033705 Valyl tRNA synthetase, anticodon-binding domain EP560_14395 IPR002300 Aminoacyl-tRNA synthetase, class Ia EP560_14395 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site EP560_14395 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain EP560_14395 IPR002303 Valine-tRNA ligase EP560_14395 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily EP560_14415 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_14415 IPR000847 Transcription regulator HTH, LysR EP560_14415 IPR005119 LysR, substrate-binding EP560_14415 IPR036390 Winged helix DNA-binding domain superfamily EP560_14425 IPR024041 Ammonium transporter AmtB-like domain EP560_14425 IPR018047 Ammonium transporter, conserved site EP560_14425 IPR001905 Ammonium transporter EP560_14425 IPR029020 Ammonium/urea transporter EP560_14435 IPR013727 Two-component sensor kinase, N-terminal EP560_14435 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP560_14435 IPR003660 HAMP domain EP560_14435 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP560_14435 IPR003594 Histidine kinase/HSP90-like ATPase EP560_14435 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP560_14435 IPR005467 Histidine kinase domain EP560_14435 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_14440 IPR011006 CheY-like superfamily EP560_14440 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_14440 IPR001789 Signal transduction response regulator, receiver domain EP560_14440 IPR039420 Transcriptional regulatory protein WalR-like EP560_14440 IPR001867 OmpR/PhoB-type DNA-binding domain EP560_14445 IPR000917 Sulfatase, N-terminal EP560_14445 IPR040423 Phosphoethanolamine transferase EP560_14445 IPR012549 Phosphoethanolamine transferase, N-terminal EP560_14445 IPR017850 Alkaline-phosphatase-like, core domain superfamily EP560_14465 IPR001423 Lysophospholipase patatin, conserved site EP560_14465 IPR002641 Patatin-like phospholipase domain EP560_14465 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase EP560_14475 IPR001972 Stomatin family EP560_14475 IPR018080 Band 7/stomatin-like, conserved site EP560_14475 IPR036013 Band 7/SPFH domain superfamily EP560_14475 IPR001107 Band 7 domain EP560_14480 IPR038056 YjbR-like superfamily EP560_14480 IPR007351 Uncharacterised protein YjbR EP560_14485 IPR008949 Isoprenoid synthase domain superfamily EP560_14485 IPR000092 Polyprenyl synthetase EP560_14485 IPR033749 Polyprenyl synthetase, conserved site EP560_14490 IPR012709 2-methyl-aconitate isomerase PrpF EP560_14490 IPR007400 PrpF protein EP560_14495 IPR004840 Amino acid permease, conserved site EP560_14495 IPR004841 Amino acid permease/ SLC12A domain EP560_14505 IPR002818 DJ-1/PfpI EP560_14505 IPR029062 Class I glutamine amidotransferase-like EP560_14505 IPR017283 Protein/nucleic acid deglycase HchA EP560_14510 IPR013154 Alcohol dehydrogenase, N-terminal EP560_14510 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase EP560_14510 IPR014030 Beta-ketoacyl synthase, N-terminal EP560_14510 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding EP560_14510 IPR036291 NAD(P)-binding domain superfamily EP560_14510 IPR036347 Erythronolide synthase, docking domain superfamily EP560_14510 IPR001227 Acyl transferase domain superfamily EP560_14510 IPR032821 Ketoacyl-synthetase, C-terminal extension EP560_14510 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain EP560_14510 IPR020807 Polyketide synthase, dehydratase domain EP560_14510 IPR042104 Polyketide synthase, dehydratase domain superfamily EP560_14510 IPR020843 Polyketide synthase, enoylreductase domain EP560_14510 IPR013968 Polyketide synthase, ketoreductase domain EP560_14510 IPR036736 ACP-like superfamily EP560_14510 IPR020806 Polyketide synthase, phosphopantetheine-binding domain EP560_14510 IPR014043 Acyl transferase EP560_14510 IPR014031 Beta-ketoacyl synthase, C-terminal EP560_14510 IPR015083 Polyketide synthase, docking domain EP560_14510 IPR009081 Phosphopantetheine binding ACP domain EP560_14510 IPR016039 Thiolase-like EP560_14510 IPR006162 Phosphopantetheine attachment site EP560_14510 IPR018201 Beta-ketoacyl synthase, active site EP560_14510 IPR015357 Erythronolide synthase, docking EP560_14510 IPR011032 GroES-like superfamily EP560_14515 IPR018060 DNA binding HTH domain, AraC-type EP560_14515 IPR009594 Transcription regulator HTH, AraC, N-terminal EP560_14515 IPR009057 Homeobox-like domain superfamily EP560_14520 IPR003824 Undecaprenyl-diphosphatase UppP EP560_14540 IPR003680 Flavodoxin-like fold EP560_14540 IPR029039 Flavoprotein-like superfamily EP560_14550 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein EP560_14550 IPR036412 HAD-like superfamily EP560_14550 IPR023214 HAD superfamily EP560_14555 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_14555 IPR002500 Phosphoadenosine phosphosulphate reductase EP560_14555 IPR011798 Adenosine 5'-phosphosulphate reductase EP560_14555 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase EP560_14560 IPR014292 Acyltransferase, WS/DGAT/MGAT EP560_14560 IPR004255 O-acyltransferase, WSD1, N-terminal EP560_14560 IPR009721 O-acyltransferase WSD1, C-terminal EP560_14570 IPR003029 S1 domain EP560_14570 IPR022967 RNA-binding domain, S1 EP560_14570 IPR004659 Ribonuclease E/G EP560_14570 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G EP560_14570 IPR012340 Nucleic acid-binding, OB-fold EP560_14575 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein EP560_14575 IPR029001 Inosine triphosphate pyrophosphatase-like EP560_14580 IPR026034 Cell shape-determining protein MreD, proteobacterial type EP560_14580 IPR007227 Cell shape-determining protein MreD EP560_14585 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 EP560_14585 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 EP560_14585 IPR007221 Rod shape-determining protein MreC EP560_14590 IPR004753 Cell shape determining protein MreB EP560_14595 IPR003837 Glu-tRNAGln amidotransferase C subunit EP560_14595 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C EP560_14600 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit EP560_14600 IPR000120 Amidase EP560_14600 IPR020556 Amidase, conserved site EP560_14600 IPR023631 Amidase signature domain EP560_14600 IPR036928 Amidase signature (AS) superfamily EP560_14605 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 EP560_14605 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E EP560_14605 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit EP560_14605 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic EP560_14605 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain EP560_14605 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site EP560_14605 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 EP560_14605 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like EP560_14605 IPR018027 Asn/Gln amidotransferase EP560_14635 IPR036640 ABC transporter type 1, transmembrane domain superfamily EP560_14635 IPR009248 SbmA/BacA-like EP560_14640 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP560_14640 IPR005789 Threonine dehydratase, catabolic EP560_14640 IPR001926 Pyridoxal-phosphate dependent enzyme EP560_14640 IPR002912 ACT domain EP560_14640 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site EP560_14645 IPR002641 Patatin-like phospholipase domain EP560_14645 IPR001423 Lysophospholipase patatin, conserved site EP560_14645 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase EP560_14650 IPR001463 Sodium:alanine symporter EP560_14665 IPR000415 Nitroreductase-like EP560_14665 IPR029479 Nitroreductase EP560_14670 IPR004734 Multidrug resistance protein EP560_14670 IPR036259 MFS transporter superfamily EP560_14670 IPR020846 Major facilitator superfamily domain EP560_14670 IPR011701 Major facilitator superfamily EP560_14670 IPR004812 Drug resistance transporter Bcr/CmlA subfamily EP560_14675 IPR032692 Integral membrane protein YccS, N-terminal EP560_14675 IPR010020 Integral membrane protein, YccS/YhfK EP560_14675 IPR010019 Integral membrane protein, YccS EP560_14685 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria EP560_14685 IPR029039 Flavoprotein-like superfamily EP560_14685 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase EP560_14685 IPR008254 Flavodoxin/nitric oxide synthase EP560_14685 IPR001094 Flavodoxin-like EP560_14685 IPR017927 FAD-binding domain, ferredoxin reductase-type EP560_14685 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP560_14685 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding EP560_14685 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain EP560_14685 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP560_14685 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily EP560_14685 IPR017938 Riboflavin synthase-like beta-barrel EP560_14700 IPR038063 L,D-transpeptidase catalytic domain-like EP560_14700 IPR005490 L,D-transpeptidase catalytic domain EP560_14700 IPR041597 L,D-transpeptidase C-terminal domain EP560_14705 IPR007401 Protein of unknown function DUF454 EP560_14715 IPR012556 Entericidin A/B EP560_14720 IPR036264 Bacterial exopeptidase dimerisation domain EP560_14720 IPR011650 Peptidase M20, dimerisation domain EP560_14720 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria EP560_14720 IPR002933 Peptidase M20 EP560_14735 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain EP560_14735 IPR004090 Chemotaxis methyl-accepting receptor EP560_14735 IPR003660 HAMP domain EP560_14735 IPR029095 NarX-like, N-terminal EP560_14740 IPR036061 CheW-like domain superfamily EP560_14740 IPR002545 CheW-like domain EP560_14740 IPR039315 Chemotaxis protein CheW EP560_14745 IPR001789 Signal transduction response regulator, receiver domain EP560_14745 IPR011006 CheY-like superfamily EP560_14750 IPR001789 Signal transduction response regulator, receiver domain EP560_14750 IPR011006 CheY-like superfamily EP560_14765 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains EP560_14765 IPR001036 Acriflavin resistance protein EP560_14770 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type EP560_14770 IPR004154 Anticodon-binding EP560_14770 IPR006195 Aminoacyl-tRNA synthetase, class II EP560_14770 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) EP560_14770 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 EP560_14770 IPR033730 Prokaryote proline-tRNA ligase core domain EP560_14770 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily EP560_14770 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain EP560_14770 IPR036621 Anticodon-binding domain superfamily EP560_14770 IPR002316 Proline-tRNA ligase, class IIa EP560_14775 IPR010879 Domain of unknown function DUF1508 EP560_14775 IPR036913 YegP-like superfamily EP560_14780 IPR004624 PhnA protein EP560_14780 IPR013988 PhnA protein, C-terminal EP560_14780 IPR013987 PhnA protein, N-terminal EP560_14785 IPR007438 Protein of unknown function DUF488 EP560_14795 IPR028896 Aminomethyltransferase-like EP560_14795 IPR006222 Aminomethyltransferase, folate-binding domain EP560_14795 IPR017703 YgfZ/GcvT conserved site EP560_14795 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal EP560_14800 IPR033954 Disulphide bond isomerase, DsbC/G EP560_14800 IPR017937 Thioredoxin, conserved site EP560_14800 IPR036249 Thioredoxin-like superfamily EP560_14800 IPR012336 Thioredoxin-like fold EP560_14800 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily EP560_14800 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal EP560_14810 IPR004776 Membrane transport protein EP560_14815 IPR023663 NADPH dehydrogenase EP560_14815 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal EP560_14815 IPR013785 Aldolase-type TIM barrel EP560_14825 IPR036995 Methylpurine-DNA glycosylase superfamily EP560_14825 IPR003180 Methylpurine-DNA glycosylase EP560_14825 IPR011034 Formyl transferase-like, C-terminal domain superfamily EP560_14830 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain EP560_14830 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding EP560_14830 IPR020629 Formamidopyrimidine-DNA glycosylase EP560_14830 IPR010663 Zinc finger, FPG/IleRS-type EP560_14830 IPR035937 MutM-like, N-terminal EP560_14830 IPR010979 Ribosomal protein S13-like, H2TH EP560_14830 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type EP560_14835 IPR023059 Foldase protein PrsA EP560_14835 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type EP560_14835 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site EP560_14835 IPR027304 Trigger factor/SurA domain superfamily EP560_14845 IPR036019 Gated mechanosensitive channel EP560_14845 IPR019823 Large-conductance mechanosensitive channel, conserved site EP560_14845 IPR001185 Large-conductance mechanosensitive channel EP560_14845 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L EP560_14855 IPR006042 Xanthine/uracil permease EP560_14855 IPR006043 Xanthine/uracil/vitamin C permease EP560_14860 IPR007848 Methyltransferase small domain EP560_14860 IPR002052 DNA methylase, N-6 adenine-specific, conserved site EP560_14860 IPR013675 Methyltransferase small, N-terminal EP560_14860 IPR023543 rRNA small subunit methyltransferase C EP560_14860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_14865 IPR004841 Amino acid permease/ SLC12A domain EP560_14865 IPR004840 Amino acid permease, conserved site EP560_14870 IPR036025 tRNA-splicing ligase RtcB-like superfamily EP560_14870 IPR001233 tRNA-splicing ligase, RtcB EP560_14875 IPR027385 Outer membrane protein beta-barrel domain EP560_14875 IPR006664 Outer membrane protein, bacterial EP560_14875 IPR006665 OmpA-like domain EP560_14875 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel EP560_14875 IPR036737 OmpA-like domain superfamily EP560_14885 IPR002155 Thiolase EP560_14885 IPR016039 Thiolase-like EP560_14885 IPR020615 Thiolase, acyl-enzyme intermediate active site EP560_14885 IPR020610 Thiolase, active site EP560_14885 IPR020617 Thiolase, C-terminal EP560_14885 IPR020613 Thiolase, conserved site EP560_14885 IPR020616 Thiolase, N-terminal EP560_14895 IPR000390 Small multidrug resistance protein family EP560_14905 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site EP560_14905 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain EP560_14905 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily EP560_14905 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain EP560_14910 IPR001479 Quinoprotein dehydrogenase, conserved site EP560_14910 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily EP560_14910 IPR002372 Pyrrolo-quinoline quinone repeat EP560_14910 IPR017511 PQQ-dependent membrane bound dehydrogenase EP560_14910 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat EP560_14915 IPR038673 Carbohydrate-selective porin OprB superfamily EP560_14915 IPR007049 Carbohydrate-selective porin OprB EP560_14920 IPR023606 CoA-transferase family III domain superfamily EP560_14920 IPR003673 CoA-transferase family III EP560_14925 IPR003313 AraC-type arabinose-binding/dimerisation domain EP560_14925 IPR009057 Homeobox-like domain superfamily EP560_14925 IPR037923 Transcription regulator HTH-like EP560_14925 IPR018060 DNA binding HTH domain, AraC-type EP560_14925 IPR018062 HTH domain AraC-type, conserved site EP560_14925 IPR020449 Transcription regulator HTH, AraC- type EP560_14930 IPR002155 Thiolase EP560_14930 IPR020615 Thiolase, acyl-enzyme intermediate active site EP560_14930 IPR020616 Thiolase, N-terminal EP560_14930 IPR020613 Thiolase, conserved site EP560_14930 IPR020617 Thiolase, C-terminal EP560_14930 IPR020610 Thiolase, active site EP560_14930 IPR016039 Thiolase-like EP560_14935 IPR029045 ClpP/crotonase-like domain superfamily EP560_14935 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP560_14935 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal EP560_14935 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding EP560_14935 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site EP560_14935 IPR036291 NAD(P)-binding domain superfamily EP560_14935 IPR001753 Enoyl-CoA hydratase/isomerase EP560_14935 IPR012802 Fatty oxidation complex, alpha subunit FadJ EP560_14960 IPR004254 AdipoR/Haemolysin-III-related EP560_14960 IPR005744 Hly-III EP560_14965 IPR005829 Sugar transporter, conserved site EP560_14965 IPR004736 MFS transporter, metabolite:H symporter EP560_14965 IPR036259 MFS transporter superfamily EP560_14965 IPR020846 Major facilitator superfamily domain EP560_14965 IPR011701 Major facilitator superfamily EP560_14965 IPR005828 Major facilitator, sugar transporter-like EP560_14975 IPR036670 SecA, preprotein cross-linking domain superfamily EP560_14975 IPR011116 SecA Wing/Scaffold EP560_14975 IPR011130 SecA, preprotein cross-linking domain EP560_14975 IPR014018 SecA motor DEAD EP560_14975 IPR011115 SecA DEAD-like, N-terminal EP560_14975 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_14975 IPR004027 SEC-C motif EP560_14975 IPR020937 SecA conserved site EP560_14975 IPR036266 SecA, Wing/Scaffold superfamily EP560_14975 IPR000185 Protein translocase subunit SecA EP560_14980 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant EP560_14980 IPR013766 Thioredoxin domain EP560_14980 IPR036249 Thioredoxin-like superfamily EP560_14980 IPR022915 Peroxiredoxin, TDXH subfamily EP560_14980 IPR019479 Peroxiredoxin, C-terminal EP560_14980 IPR024706 Peroxiredoxin, AhpC-type EP560_14985 IPR001279 Metallo-beta-lactamase EP560_14985 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP560_15000 IPR001645 Folylpolyglutamate synthetase EP560_15000 IPR004101 Mur ligase, C-terminal EP560_15000 IPR013221 Mur ligase, central EP560_15000 IPR036615 Mur ligase, C-terminal domain superfamily EP560_15000 IPR036565 Mur-like, catalytic domain superfamily EP560_15000 IPR018109 Folylpolyglutamate synthetase, conserved site EP560_15005 IPR034733 Acetyl-CoA carboxylase EP560_15005 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit EP560_15005 IPR029045 ClpP/crotonase-like domain superfamily EP560_15005 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal EP560_15010 IPR011060 Ribulose-phosphate binding barrel EP560_15010 IPR013785 Aldolase-type TIM barrel EP560_15010 IPR002028 Tryptophan synthase, alpha chain EP560_15010 IPR018204 Tryptophan synthase, alpha chain, active site EP560_15035 IPR023026 Tryptophan synthase beta chain/beta chain-like EP560_15035 IPR006653 Tryptophan synthase, beta chain, conserved site EP560_15035 IPR001926 Pyridoxal-phosphate dependent enzyme EP560_15035 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP560_15035 IPR006654 Tryptophan synthase, beta chain EP560_15040 IPR011060 Ribulose-phosphate binding barrel EP560_15040 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) EP560_15040 IPR013785 Aldolase-type TIM barrel EP560_15045 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_15045 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP560_15045 IPR010916 TonB box, conserved site EP560_15045 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_15045 IPR012910 TonB-dependent receptor, plug domain EP560_15045 IPR010917 TonB-dependent receptor, conserved site EP560_15045 IPR010101 TonB-dependent vitamin B12 transporter BtuB EP560_15045 IPR039426 Vitamin B12 transporter BtuB-like EP560_15050 IPR016030 Cobalamin adenosyltransferase-like EP560_15050 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type EP560_15050 IPR036451 Cobalamin adenosyltransferase-like superfamily EP560_15055 IPR030395 Glycerophosphodiester phosphodiesterase domain EP560_15055 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily EP560_15070 IPR003846 Protein adenylyltransferase SelO EP560_15075 IPR001789 Signal transduction response regulator, receiver domain EP560_15075 IPR011006 CheY-like superfamily EP560_15075 IPR001867 OmpR/PhoB-type DNA-binding domain EP560_15075 IPR016032 Signal transduction response regulator, C-terminal effector EP560_15075 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_15075 IPR039420 Transcriptional regulatory protein WalR-like EP560_15080 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP560_15080 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP560_15080 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP560_15080 IPR005467 Histidine kinase domain EP560_15080 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_15080 IPR003660 HAMP domain EP560_15080 IPR003594 Histidine kinase/HSP90-like ATPase EP560_15090 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_15090 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_15090 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_15090 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_15090 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_15090 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_15090 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain EP560_15095 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_15095 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_15095 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_15095 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_15095 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_15095 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain EP560_15095 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_15100 IPR020948 Phosphate-starvation-induced PsiE-like EP560_15100 IPR009315 Phosphate-starvation-induced PsiE EP560_15120 IPR039426 Vitamin B12 transporter BtuB-like EP560_15120 IPR012910 TonB-dependent receptor, plug domain EP560_15120 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_15120 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_15130 IPR004524 Aspartate-tRNA ligase, type 1 EP560_15130 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb EP560_15130 IPR004115 GAD-like domain superfamily EP560_15130 IPR029351 GAD domain EP560_15130 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) EP560_15130 IPR012340 Nucleic acid-binding, OB-fold EP560_15130 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type EP560_15130 IPR006195 Aminoacyl-tRNA synthetase, class II EP560_15145 IPR025668 Transposase DDE domain EP560_15160 IPR036397 Ribonuclease H superfamily EP560_15160 IPR001584 Integrase, catalytic core EP560_15160 IPR012337 Ribonuclease H-like superfamily EP560_15160 IPR001598 Transposase, IS30, conserved site EP560_15160 IPR025246 Transposase IS30-like HTH domain EP560_15180 IPR001296 Glycosyl transferase, family 1 EP560_15180 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain EP560_15185 IPR029044 Nucleotide-diphospho-sugar transferases EP560_15185 IPR001173 Glycosyltransferase 2-like EP560_15190 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel EP560_15190 IPR002509 NodB homology domain EP560_15205 IPR005785 Branched-chain amino acid aminotransferase I EP560_15205 IPR036038 Aminotransferase-like, PLP-dependent enzymes EP560_15205 IPR033939 Branched-chain aminotransferase EP560_15205 IPR018300 Aminotransferase, class IV, conserved site EP560_15205 IPR001544 Aminotransferase class IV EP560_15210 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme EP560_15210 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase EP560_15210 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain EP560_15215 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP560_15215 IPR036249 Thioredoxin-like superfamily EP560_15215 IPR011649 KaiB domain EP560_15215 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP560_15215 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP560_15215 IPR005467 Histidine kinase domain EP560_15215 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_15215 IPR003594 Histidine kinase/HSP90-like ATPase EP560_15215 IPR023527 Adaptive-response sensory-kinase SasA EP560_15225 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily EP560_15225 IPR042119 QueA, domain 2 EP560_15225 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA EP560_15225 IPR042118 QueA, domain 1 EP560_15240 IPR002616 tRNA-guanine(15) transglycosylase-like EP560_15240 IPR036511 Queuine tRNA-ribosyltransferase-like EP560_15240 IPR004803 tRNA-guanine transglycosylase EP560_15245 IPR003849 Preprotein translocase YajC EP560_15250 IPR027398 SecD export protein N-terminal TM domain EP560_15250 IPR005791 Protein translocase subunit SecD EP560_15250 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial EP560_15250 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site EP560_15250 IPR022645 Protein-export membrane protein SecD/SecF, bacterial EP560_15255 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site EP560_15255 IPR005665 Protein-export membrane protein SecF, bacterial EP560_15255 IPR022645 Protein-export membrane protein SecD/SecF, bacterial EP560_15255 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial EP560_15260 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal EP560_15260 IPR036551 Flavin prenyltransferase-like EP560_15260 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC EP560_15260 IPR003382 Flavoprotein EP560_15260 IPR035929 CoaB-like superfamily EP560_15265 IPR025657 RadC-like JAB domain EP560_15265 IPR037518 MPN domain EP560_15265 IPR010994 RuvA domain 2-like EP560_15265 IPR001405 Uncharacterised protein family UPF0758 EP560_15270 IPR021134 Bestrophin/UPF0187 EP560_15275 IPR016195 Polymerase/histidinol phosphatase-like EP560_15275 IPR004013 PHP domain EP560_15275 IPR003141 Polymerase/histidinol phosphatase, N-terminal EP560_15280 IPR006008 Intracellular septation protein A EP560_15285 IPR011008 Dimeric alpha-beta barrel EP560_15285 IPR005545 YCII-related EP560_15295 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC EP560_15295 IPR006076 FAD dependent oxidoreductase EP560_15295 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal EP560_15295 IPR008471 MnmC-like methyltransferase EP560_15295 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_15305 IPR035571 UPF0234-like, C-terminal EP560_15305 IPR035570 UPF0234, N-terminal EP560_15305 IPR036183 YajQ-like superfamily EP560_15305 IPR007551 Protein of unknown function DUF520 EP560_15315 IPR006683 Thioesterase domain EP560_15315 IPR029069 HotDog domain superfamily EP560_15315 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain EP560_15315 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase EP560_15320 IPR036249 Thioredoxin-like superfamily EP560_15320 IPR005746 Thioredoxin EP560_15320 IPR017937 Thioredoxin, conserved site EP560_15320 IPR013766 Thioredoxin domain EP560_15325 IPR000073 Alpha/beta hydrolase fold-1 EP560_15325 IPR029058 Alpha/Beta hydrolase fold EP560_15330 IPR005939 Beta-lactamase hydrolase-like EP560_15330 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP560_15330 IPR029021 Protein-tyrosine phosphatase-like EP560_15330 IPR001279 Metallo-beta-lactamase EP560_15340 IPR006258 Dihydrolipoamide dehydrogenase EP560_15340 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I EP560_15340 IPR023753 FAD/NAD(P)-binding domain EP560_15340 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_15340 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EP560_15340 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site EP560_15340 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily EP560_15375 IPR003660 HAMP domain EP560_15375 IPR000160 GGDEF domain EP560_15375 IPR029787 Nucleotide cyclase EP560_15375 IPR033417 Periplasmic sensor domain CHASE8 EP560_15385 IPR036737 OmpA-like domain superfamily EP560_15385 IPR006665 OmpA-like domain EP560_15385 IPR000498 Outer membrane protein OmpA-like, transmembrane domain EP560_15385 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel EP560_15385 IPR006664 Outer membrane protein, bacterial EP560_15385 IPR002368 Outer membrane protein, OmpA EP560_15385 IPR006690 Outer membrane protein, OmpA-like, conserved site EP560_15390 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type EP560_15390 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal EP560_15390 IPR029052 Metallo-dependent phosphatase-like EP560_15390 IPR006311 Twin-arginine translocation pathway, signal sequence EP560_15395 IPR030871 Cardiolipin synthase C EP560_15395 IPR025202 Phospholipase D-like domain EP560_15395 IPR001736 Phospholipase D/Transphosphatidylase EP560_15405 IPR030394 HflX-type guanine nucleotide-binding (G) domain EP560_15405 IPR032305 GTP-binding protein, middle domain EP560_15405 IPR042108 GTPase HflX, N-terminal domain superfamily EP560_15405 IPR016496 GTPase HflX EP560_15405 IPR025121 GTPase HflX, N-terminal EP560_15405 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_15405 IPR035647 EF-G domain III/V-like EP560_15405 IPR006073 GTP binding domain EP560_15425 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) EP560_15425 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type EP560_15425 IPR029052 Metallo-dependent phosphatase-like EP560_15430 IPR011530 Ribosomal RNA adenine dimethylase EP560_15430 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal EP560_15430 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site EP560_15430 IPR023165 rRNA adenine dimethylase-like EP560_15430 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm EP560_15430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_15435 IPR005255 PdxA family EP560_15435 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase EP560_15440 IPR036899 Ribosomal protein L13 superfamily EP560_15440 IPR005823 Ribosomal protein L13, bacterial-type EP560_15440 IPR005822 Ribosomal protein L13 EP560_15445 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_15445 IPR020574 Ribosomal protein S9, conserved site EP560_15445 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP560_15445 IPR000754 Ribosomal protein S9 EP560_15445 IPR023035 Ribosomal protein S9, bacterial/plastid EP560_15450 IPR010987 Glutathione S-transferase, C-terminal-like EP560_15450 IPR036249 Thioredoxin-like superfamily EP560_15450 IPR034341 Stringent starvation protein A, N-terminal EP560_15450 IPR004046 Glutathione S-transferase, C-terminal EP560_15450 IPR004045 Glutathione S-transferase, N-terminal EP560_15450 IPR040079 Glutathione Transferase family EP560_15450 IPR036282 Glutathione S-transferase, C-terminal domain superfamily EP560_15455 IPR007481 Stringent starvation protein B EP560_15455 IPR036760 SspB-like superfamily EP560_15465 IPR011053 Single hybrid motif EP560_15465 IPR011054 Rudiment single hybrid motif EP560_15465 IPR016185 Pre-ATP-grasp domain superfamily EP560_15465 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain EP560_15465 IPR005482 Biotin carboxylase, C-terminal EP560_15465 IPR011764 Biotin carboxylation domain EP560_15465 IPR001882 Biotin-binding site EP560_15465 IPR011761 ATP-grasp fold EP560_15465 IPR000089 Biotin/lipoyl attachment EP560_15465 IPR005481 Biotin carboxylase-like, N-terminal domain EP560_15475 IPR006089 Acyl-CoA dehydrogenase, conserved site EP560_15475 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_15475 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_15475 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_15475 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_15475 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_15475 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_15480 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal EP560_15480 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal EP560_15480 IPR034733 Acetyl-CoA carboxylase EP560_15480 IPR029045 ClpP/crotonase-like domain superfamily EP560_15485 IPR036291 NAD(P)-binding domain superfamily EP560_15485 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_15495 IPR001647 DNA-binding HTH domain, TetR-type EP560_15495 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal EP560_15495 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP560_15495 IPR009057 Homeobox-like domain superfamily EP560_15500 IPR006089 Acyl-CoA dehydrogenase, conserved site EP560_15500 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_15500 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_15500 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_15500 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_15500 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_15500 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_15545 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase EP560_15545 IPR000462 CDP-alcohol phosphatidyltransferase EP560_15550 IPR007473 Ribosomal RNA large subunit methyltransferase J EP560_15550 IPR002052 DNA methylase, N-6 adenine-specific, conserved site EP560_15550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_15570 IPR022383 Lactate/malate dehydrogenase, C-terminal EP560_15570 IPR001557 L-lactate/malate dehydrogenase EP560_15570 IPR036291 NAD(P)-binding domain superfamily EP560_15570 IPR001236 Lactate/malate dehydrogenase, N-terminal EP560_15570 IPR010945 Malate dehydrogenase, type 2 EP560_15570 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal EP560_15580 IPR023346 Lysozyme-like domain superfamily EP560_15580 IPR016047 Peptidase M23 EP560_15580 IPR010090 Phage tail tape measure protein EP560_15580 IPR000189 Prokaryotic transglycosylase, active site EP560_15580 IPR008258 Transglycosylase SLT domain 1 EP560_15580 IPR011055 Duplicated hybrid motif EP560_15585 IPR007197 Radical SAM EP560_15585 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB EP560_15585 IPR023404 Radical SAM, alpha/beta horseshoe EP560_15585 IPR006638 Elp3/MiaB/NifB EP560_15585 IPR005839 Methylthiotransferase EP560_15585 IPR020612 Methylthiotransferase, conserved site EP560_15585 IPR013848 Methylthiotransferase, N-terminal EP560_15585 IPR038135 Methylthiotransferase, N-terminal domain superfamily EP560_15585 IPR002792 TRAM domain EP560_15590 IPR003714 PhoH-like protein EP560_15590 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_15595 IPR002036 Endoribonuclease YbeY EP560_15595 IPR023091 Metalloprotease catalytic domain superfamily, predicted EP560_15595 IPR020549 Endoribonuclease YbeY, conserved site EP560_15615 IPR029057 Phosphoribosyltransferase-like EP560_15615 IPR010079 Xanthine phosphoribosyltransferase EP560_15615 IPR000836 Phosphoribosyltransferase domain EP560_15620 IPR005025 NADPH-dependent FMN reductase-like EP560_15620 IPR010089 Flavoprotein WrbA-like EP560_15620 IPR029039 Flavoprotein-like superfamily EP560_15620 IPR001226 Flavodoxin, conserved site EP560_15620 IPR008254 Flavodoxin/nitric oxide synthase EP560_15625 IPR023679 Uncharacterised protein family UPF0761, bacterial EP560_15625 IPR017039 Virulence factor BrkB EP560_15630 IPR000620 EamA domain EP560_15635 IPR009057 Homeobox-like domain superfamily EP560_15635 IPR020449 Transcription regulator HTH, AraC- type EP560_15635 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily EP560_15635 IPR011051 RmlC-like cupin domain superfamily EP560_15635 IPR014710 RmlC-like jelly roll fold EP560_15635 IPR018062 HTH domain AraC-type, conserved site EP560_15635 IPR018060 DNA binding HTH domain, AraC-type EP560_15640 IPR011234 Fumarylacetoacetase-like, C-terminal EP560_15640 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily EP560_15685 IPR022967 RNA-binding domain, S1 EP560_15685 IPR003029 S1 domain EP560_15685 IPR022966 Ribonuclease II/R, conserved site EP560_15685 IPR001900 Ribonuclease II/R EP560_15685 IPR004476 Ribonuclease II/ribonuclease R EP560_15685 IPR013223 Ribonuclease B, N-terminal OB domain EP560_15685 IPR013668 Ribonuclease R winged-helix domain EP560_15685 IPR011805 Ribonuclease R EP560_15685 IPR012340 Nucleic acid-binding, OB-fold EP560_15685 IPR040476 RNase II/RNase R, cold shock domain EP560_15685 IPR011129 Cold shock domain EP560_15690 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 EP560_15690 IPR001567 Peptidase M3A/M3B catalytic domain EP560_15695 IPR012658 Conserved hypothetical protein CHP02443 EP560_15725 IPR005631 Flavinator of succinate dehydrogenase EP560_15725 IPR036714 Flavinator of succinate dehydrogenase superfamily EP560_15730 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_15730 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_15730 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_15730 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_15730 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_15730 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_15730 IPR006089 Acyl-CoA dehydrogenase, conserved site EP560_15735 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_15735 IPR020946 Flavin monooxygenase-like EP560_15740 IPR036373 Ribosomal protein L17 superfamily EP560_15740 IPR000456 Ribosomal protein L17 EP560_15745 IPR036603 RNA polymerase, RBP11-like subunit EP560_15745 IPR011260 RNA polymerase, alpha subunit, C-terminal EP560_15745 IPR036643 DNA-directed RNA polymerase, insert domain superfamily EP560_15745 IPR011262 DNA-directed RNA polymerase, insert domain EP560_15745 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type EP560_15745 IPR011773 DNA-directed RNA polymerase, alpha subunit EP560_15750 IPR022801 Ribosomal protein S4/S9 EP560_15750 IPR036986 RNA-binding S4 domain superfamily EP560_15750 IPR001912 Ribosomal protein S4/S9, N-terminal EP560_15750 IPR005709 Ribosomal protein S4, bacterial-type EP560_15750 IPR018079 Ribosomal protein S4, conserved site EP560_15750 IPR002942 RNA-binding S4 domain EP560_15755 IPR018102 Ribosomal S11, conserved site EP560_15755 IPR001971 Ribosomal protein S11 EP560_15755 IPR019981 Ribosomal protein S11, bacterial-type EP560_15755 IPR036967 Ribosomal protein S11 superfamily EP560_15760 IPR019980 Ribosomal protein S13, bacterial-type EP560_15760 IPR010979 Ribosomal protein S13-like, H2TH EP560_15760 IPR001892 Ribosomal protein S13 EP560_15760 IPR027437 30s ribosomal protein S13, C-terminal EP560_15760 IPR018269 Ribosomal protein S13, conserved site EP560_15765 IPR035977 Ribosomal protein L36 superfamily EP560_15765 IPR000473 Ribosomal protein L36 EP560_15770 IPR002208 SecY/SEC61-alpha family EP560_15770 IPR023201 SecY domain superfamily EP560_15770 IPR026593 Protein translocase subunit SecY EP560_15770 IPR030659 SecY conserved site EP560_15775 IPR036227 Ribosomal L18e/L15P superfamily EP560_15775 IPR030878 Ribosomal protein L15 EP560_15775 IPR005749 Ribosomal protein L15, bacterial-type EP560_15775 IPR001196 Ribosomal protein L15, conserved site EP560_15775 IPR021131 Ribosomal protein L18e/L15P EP560_15780 IPR005996 Ribosomal protein L30, bacterial-type EP560_15780 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily EP560_15780 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain EP560_15785 IPR013810 Ribosomal protein S5, N-terminal EP560_15785 IPR018192 Ribosomal protein S5, N-terminal, conserved site EP560_15785 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP560_15785 IPR005712 Ribosomal protein S5, bacterial-type EP560_15785 IPR000851 Ribosomal protein S5 EP560_15785 IPR005324 Ribosomal protein S5, C-terminal EP560_15785 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_15790 IPR005484 Ribosomal protein L18 EP560_15790 IPR004389 Ribosomal protein L18, bacterial-type EP560_15795 IPR000702 Ribosomal protein L6 EP560_15795 IPR020040 Ribosomal protein L6, alpha-beta domain EP560_15795 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily EP560_15795 IPR019906 Ribosomal protein L6, bacterial-type EP560_15795 IPR002358 Ribosomal protein L6, conserved site EP560_15800 IPR035987 Ribosomal protein S8 superfamily EP560_15800 IPR000630 Ribosomal protein S8 EP560_15805 IPR018271 Ribosomal protein S14, conserved site EP560_15805 IPR001209 Ribosomal protein S14 EP560_15805 IPR023036 Ribosomal protein S14, bacterial/plastid EP560_15810 IPR020929 Ribosomal protein L5, conserved site EP560_15810 IPR031309 Ribosomal protein L5, C-terminal EP560_15810 IPR022803 Ribosomal protein L5 domain superfamily EP560_15810 IPR002132 Ribosomal protein L5 EP560_15810 IPR020930 Ribosomal protein L5, bacterial-type EP560_15810 IPR031310 Ribosomal protein L5, N-terminal EP560_15815 IPR003256 Ribosomal protein L24 EP560_15815 IPR008991 Translation protein SH3-like domain superfamily EP560_15815 IPR005824 KOW EP560_15815 IPR005825 Ribosomal protein L24/L26, conserved site EP560_15815 IPR014722 Ribosomal protein L2, domain 2 EP560_15815 IPR041988 Ribosomal Protein L26/L24, KOW domain EP560_15820 IPR000218 Ribosomal protein L14P EP560_15820 IPR036853 Ribosomal protein L14 superfamily EP560_15820 IPR019972 Ribosomal protein L14P, conserved site EP560_15820 IPR005745 Ribosomal protein L14P, bacterial-type EP560_15825 IPR019984 30S ribosomal protein S17 EP560_15825 IPR019979 Ribosomal protein S17, conserved site EP560_15825 IPR000266 Ribosomal protein S17/S11 EP560_15825 IPR012340 Nucleic acid-binding, OB-fold EP560_15830 IPR036049 Ribosomal protein L29/L35 superfamily EP560_15830 IPR001854 Ribosomal protein L29/L35 EP560_15835 IPR000114 Ribosomal protein L16 EP560_15835 IPR036920 Ribosomal protein L10e/L16 superfamily EP560_15835 IPR016180 Ribosomal protein L10e/L16 EP560_15835 IPR020798 Ribosomal protein L16, conserved site EP560_15840 IPR005704 Ribosomal protein S3, bacterial-type EP560_15840 IPR009019 K homology domain superfamily, prokaryotic type EP560_15840 IPR004044 K Homology domain, type 2 EP560_15840 IPR015946 K homology domain-like, alpha/beta EP560_15840 IPR004087 K Homology domain EP560_15840 IPR036419 Ribosomal protein S3, C-terminal domain superfamily EP560_15840 IPR018280 Ribosomal protein S3, conserved site EP560_15840 IPR001351 Ribosomal protein S3, C-terminal EP560_15845 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type EP560_15845 IPR036394 Ribosomal protein L22/L17 superfamily EP560_15845 IPR001063 Ribosomal protein L22/L17 EP560_15845 IPR018260 Ribosomal protein L22/L17, conserved site EP560_15850 IPR002222 Ribosomal protein S19/S15 EP560_15850 IPR005732 Ribosomal protein S19, bacterial-type EP560_15850 IPR020934 Ribosomal protein S19 conserved site EP560_15850 IPR023575 Ribosomal protein S19, superfamily EP560_15855 IPR014726 Ribosomal protein L2, domain 3 EP560_15855 IPR005880 Ribosomal protein L2, bacterial/organellar-type EP560_15855 IPR022666 Ribosomal Proteins L2, RNA binding domain EP560_15855 IPR012340 Nucleic acid-binding, OB-fold EP560_15855 IPR008991 Translation protein SH3-like domain superfamily EP560_15855 IPR014722 Ribosomal protein L2, domain 2 EP560_15855 IPR002171 Ribosomal protein L2 EP560_15855 IPR022669 Ribosomal protein L2, C-terminal EP560_15860 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily EP560_15860 IPR012678 Ribosomal protein L23/L15e core domain superfamily EP560_15860 IPR013025 Ribosomal protein L25/L23 EP560_15865 IPR013005 50S ribosomal protein uL4 EP560_15865 IPR023574 Ribosomal protein L4 domain superfamily EP560_15865 IPR002136 Ribosomal protein L4/L1e EP560_15870 IPR009000 Translation protein, beta-barrel domain superfamily EP560_15870 IPR000597 Ribosomal protein L3 EP560_15870 IPR019927 Ribosomal protein L3, bacterial/organelle-type EP560_15870 IPR019926 Ribosomal protein L3, conserved site EP560_15875 IPR018268 Ribosomal protein S10, conserved site EP560_15875 IPR027486 Ribosomal protein S10 domain EP560_15875 IPR036838 Ribosomal protein S10 domain superfamily EP560_15875 IPR001848 Ribosomal protein S10 EP560_15880 IPR017926 Glutamine amidotransferase EP560_15880 IPR029062 Class I glutamine amidotransferase-like EP560_15885 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_15885 IPR015424 Pyridoxal phosphate-dependent transferase EP560_15885 IPR006233 Cystathionine beta-lyase, bacterial EP560_15885 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme EP560_15885 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_15890 IPR033186 Helicase HerA-like C-terminal EP560_15890 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_15895 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP560_15895 IPR023950 Flavohemoprotein EP560_15895 IPR012292 Globin/Protoglobin EP560_15895 IPR009050 Globin-like superfamily EP560_15895 IPR017938 Riboflavin synthase-like beta-barrel EP560_15895 IPR000971 Globin EP560_15895 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP560_15895 IPR017927 FAD-binding domain, ferredoxin reductase-type EP560_15895 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain EP560_15900 IPR030489 Transcription regulator Rrf2-type, conserved site EP560_15900 IPR036390 Winged helix DNA-binding domain superfamily EP560_15900 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_15900 IPR000944 Transcription regulator Rrf2-type EP560_15900 IPR023761 Transcriptional repressor HTH, NsrR EP560_15905 IPR030393 EngB-type guanine nucleotide-binding (G) domain EP560_15905 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_15905 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC EP560_15905 IPR006073 GTP binding domain EP560_15915 IPR018107 Sodium:dicarboxylate symporter, conserved site EP560_15915 IPR033380 Glutamate-aspartate symport protein GltP/GltT EP560_15915 IPR034703 Proton/glutamate-aspartate symporter GltP EP560_15915 IPR001991 Sodium:dicarboxylate symporter EP560_15915 IPR036458 Sodium:dicarboxylate symporter superfamily EP560_15920 IPR029069 HotDog domain superfamily EP560_15920 IPR003703 Acyl-CoA thioesterase EP560_15925 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase EP560_15925 IPR002123 Phospholipid/glycerol acyltransferase EP560_15925 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB EP560_15925 IPR041728 GPAT/DHAPAT, acyltransferase domain EP560_15930 IPR038404 TRAP transporter solute receptor DctP superfamily EP560_15940 IPR001650 Helicase, C-terminal EP560_15940 IPR033454 RecG, wedge domain EP560_15940 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP560_15940 IPR004609 ATP-dependent DNA helicase RecG EP560_15940 IPR012340 Nucleic acid-binding, OB-fold EP560_15940 IPR011545 DEAD/DEAH box helicase domain EP560_15940 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_15945 IPR029057 Phosphoribosyltransferase-like EP560_15945 IPR005222 Competence protein ComF EP560_15945 IPR000836 Phosphoribosyltransferase domain EP560_15950 IPR000086 NUDIX hydrolase domain EP560_15950 IPR020476 NUDIX hydrolase EP560_15950 IPR015797 NUDIX hydrolase-like domain superfamily EP560_15950 IPR020084 NUDIX hydrolase, conserved site EP560_15955 IPR031100 LOG family EP560_15955 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG EP560_15960 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB EP560_15960 IPR004488 Magnesium/cobalt transport protein CorA EP560_15970 IPR042245 Tgt2/MlaC superfamily EP560_15970 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC EP560_15980 IPR030802 ABC transporter permease MalE EP560_15980 IPR003453 ABC transport permease subunit MlaE, Proteobacteria EP560_15985 IPR003593 AAA+ ATPase domain EP560_15985 IPR003439 ABC transporter-like EP560_15985 IPR017871 ABC transporter, conserved site EP560_15985 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl EP560_15985 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_15995 IPR014014 RNA helicase, DEAD-box type, Q motif EP560_15995 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site EP560_15995 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP560_15995 IPR021046 Cold-shock protein, DEAD box A, C-terminal EP560_15995 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_15995 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily EP560_15995 IPR001650 Helicase, C-terminal EP560_15995 IPR028618 ATP-dependent RNA helicase DeaD EP560_15995 IPR011545 DEAD/DEAH box helicase domain EP560_15995 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain EP560_15995 IPR034415 CsdA, RNA recognition motif EP560_16000 IPR020550 Inositol monophosphatase, conserved site EP560_16000 IPR000760 Inositol monophosphatase-like EP560_16000 IPR020583 Inositol monophosphatase, metal-binding site EP560_16000 IPR033942 Inositol monophosphatase EP560_16000 IPR022337 Inositol monophosphatase, SuhB EP560_16005 IPR005477 Deoxyxylulose-5-phosphate synthase EP560_16005 IPR029061 Thiamin diphosphate-binding fold EP560_16005 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II EP560_16005 IPR033248 Transketolase, C-terminal domain EP560_16005 IPR020826 Transketolase binding site EP560_16005 IPR005475 Transketolase-like, pyrimidine-binding domain EP560_16010 IPR000926 GTP cyclohydrolase II, RibA EP560_16010 IPR036144 RibA-like superfamily EP560_16010 IPR032677 GTP cyclohydrolase II EP560_16015 IPR018375 Coproporphyrinogen III oxidase, conserved site EP560_16015 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily EP560_16015 IPR001260 Coproporphyrinogen III oxidase, aerobic EP560_16020 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal EP560_16020 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase EP560_16020 IPR011342 Shikimate dehydrogenase EP560_16020 IPR041121 SDH, C-terminal EP560_16020 IPR036291 NAD(P)-binding domain superfamily EP560_16020 IPR022893 Shikimate dehydrogenase family EP560_16030 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_16030 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_16030 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_16030 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain EP560_16030 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_16030 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_16030 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_16040 IPR007168 Phage shock protein, PspC, N-terminal EP560_16045 IPR000644 CBS domain EP560_16070 IPR002310 Glycine-tRNA ligase, alpha subunit EP560_16070 IPR006194 Glycine-tRNA synthetase, heterodimeric EP560_16075 IPR006194 Glycine-tRNA synthetase, heterodimeric EP560_16075 IPR008909 DALR anticodon binding EP560_16075 IPR015944 Glycine-tRNA ligase, beta subunit EP560_16090 IPR000620 EamA domain EP560_16095 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_16095 IPR036390 Winged helix DNA-binding domain superfamily EP560_16095 IPR000847 Transcription regulator HTH, LysR EP560_16095 IPR005119 LysR, substrate-binding EP560_16125 IPR007036 Succinylglutamate desuccinylase/aspartoacylase EP560_16125 IPR016681 Succinylglutamate desuccinylase EP560_16130 IPR037031 Succinylarginine dihydrolase superfamily EP560_16130 IPR007079 Succinylarginine dihydrolase EP560_16135 IPR016161 Aldehyde/histidinol dehydrogenase EP560_16135 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_16135 IPR016160 Aldehyde dehydrogenase, cysteine active site EP560_16135 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP560_16135 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_16135 IPR015590 Aldehyde dehydrogenase domain EP560_16135 IPR017649 Succinylglutamate-semialdehyde dehydrogenase EP560_16140 IPR017650 Arginine N-succinyltransferase EP560_16140 IPR016181 Acyl-CoA N-acyltransferase EP560_16140 IPR007041 Arginine N-succinyltransferase AstA/AruG EP560_16145 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria EP560_16145 IPR004636 Acetylornithine/Succinylornithine transaminase family EP560_16145 IPR005814 Aminotransferase class-III EP560_16145 IPR026330 Succinylornithine transaminase EP560_16145 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_16145 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_16145 IPR015424 Pyridoxal phosphate-dependent transferase EP560_16150 IPR033922 NAD(P) binding domain of glutamate dehydrogenase EP560_16150 IPR014362 Glutamate dehydrogenase EP560_16150 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain EP560_16150 IPR036291 NAD(P)-binding domain superfamily EP560_16150 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal EP560_16150 IPR033524 Leu/Phe/Val dehydrogenases active site EP560_16150 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase EP560_16155 IPR004840 Amino acid permease, conserved site EP560_16155 IPR004841 Amino acid permease/ SLC12A domain EP560_16165 IPR013216 Methyltransferase type 11 EP560_16165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_16185 IPR025669 AAA domain EP560_16185 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_16190 IPR002549 Transmembrane protein TqsA-like EP560_16195 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily EP560_16195 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone EP560_16195 IPR018152 Superoxide dismutase, copper/zinc, binding site EP560_16195 IPR001424 Superoxide dismutase, copper/zinc binding domain EP560_16215 IPR020846 Major facilitator superfamily domain EP560_16215 IPR011701 Major facilitator superfamily EP560_16215 IPR036259 MFS transporter superfamily EP560_16215 IPR005829 Sugar transporter, conserved site EP560_16225 IPR029039 Flavoprotein-like superfamily EP560_16225 IPR003680 Flavodoxin-like fold EP560_16230 IPR011008 Dimeric alpha-beta barrel EP560_16230 IPR007138 Antibiotic biosynthesis monooxygenase domain EP560_16240 IPR016164 FAD-linked oxidase-like, C-terminal EP560_16240 IPR036318 FAD-binding, type PCMH-like superfamily EP560_16240 IPR016166 FAD-binding domain, PCMH-type EP560_16240 IPR004490 Glycolate oxidase subunit GlcD EP560_16240 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 EP560_16240 IPR006094 FAD linked oxidase, N-terminal EP560_16240 IPR004113 FAD-linked oxidase, C-terminal EP560_16245 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EP560_16245 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site EP560_16245 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 EP560_16245 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain EP560_16245 IPR036291 NAD(P)-binding domain superfamily EP560_16245 IPR002912 ACT domain EP560_16250 IPR000620 EamA domain EP560_16255 IPR000620 EamA domain EP560_16265 IPR002781 Transmembrane protein TauE-like EP560_16270 IPR002501 Pseudouridine synthase II, N-terminal EP560_16270 IPR015947 PUA-like superfamily EP560_16270 IPR014780 tRNA pseudouridine synthase II, TruB EP560_16270 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal EP560_16270 IPR032819 tRNA pseudouridylate synthase B, C-terminal EP560_16270 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP560_16275 IPR004961 Lipase chaperone EP560_16280 IPR000073 Alpha/beta hydrolase fold-1 EP560_16280 IPR029058 Alpha/Beta hydrolase fold EP560_16285 IPR008991 Translation protein SH3-like domain superfamily EP560_16285 IPR018257 Ribosomal protein L19, conserved site EP560_16285 IPR001857 Ribosomal protein L19 EP560_16285 IPR038657 Ribosomal protein L19 superfamily EP560_16290 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal EP560_16290 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria EP560_16290 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain EP560_16290 IPR029028 Alpha/beta knot methyltransferases EP560_16290 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal EP560_16295 IPR002676 RimM, N-terminal EP560_16295 IPR011033 PRC-barrel-like superfamily EP560_16295 IPR009000 Translation protein, beta-barrel domain superfamily EP560_16295 IPR027275 PRC-barrel domain EP560_16295 IPR036976 RimM, N-terminal domain superfamily EP560_16295 IPR011961 16S rRNA processing protein RimM EP560_16300 IPR023803 Ribosomal protein S16 domain superfamily EP560_16300 IPR000307 Ribosomal protein S16 EP560_16300 IPR020592 Ribosomal protein S16, conserved site EP560_16340 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase EP560_16345 IPR020590 Guanylate kinase, conserved site EP560_16345 IPR017665 Guanylate kinase EP560_16345 IPR008144 Guanylate kinase-like domain EP560_16345 IPR008145 Guanylate kinase/L-type calcium channel beta subunit EP560_16345 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_16350 IPR006110 RNA polymerase, subunit omega/K/RPB6 EP560_16350 IPR012293 RNA polymerase subunit, RPB6/omega EP560_16350 IPR036161 RPB6/omega subunit-like superfamily EP560_16350 IPR003716 DNA-directed RNA polymerase, omega subunit EP560_16360 IPR002912 ACT domain EP560_16360 IPR033655 RelA, TGS domain EP560_16360 IPR012676 TGS-like EP560_16360 IPR004095 TGS EP560_16360 IPR007685 RelA/SpoT EP560_16360 IPR004811 RelA/SpoT family EP560_16360 IPR012675 Beta-grasp domain superfamily EP560_16360 IPR003607 HD/PDEase domain EP560_16365 IPR006175 YjgF/YER057c/UK114 family EP560_16365 IPR035959 RutC-like superfamily EP560_16365 IPR019897 RidA, conserved site EP560_16365 IPR006056 RidA family EP560_16370 IPR007419 BFD-like [2Fe-2S]-binding domain EP560_16370 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily EP560_16375 IPR002024 Bacterioferritin EP560_16375 IPR012347 Ferritin-like EP560_16375 IPR009040 Ferritin-like diiron domain EP560_16375 IPR009078 Ferritin-like superfamily EP560_16375 IPR008331 Ferritin/DPS protein domain EP560_16380 IPR021797 Virulence factor membrane-bound polymerase, C-terminal EP560_16380 IPR007016 O-antigen ligase-related EP560_16380 IPR031726 Protein glycosylation ligase domain EP560_16385 IPR012902 Prokaryotic N-terminal methylation site EP560_16385 IPR001082 Fimbrial protein pilin EP560_16395 IPR007621 TPM domain EP560_16400 IPR007156 LemA EP560_16400 IPR023353 LemA-like domain superfamily EP560_16410 IPR023753 FAD/NAD(P)-binding domain EP560_16410 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_16410 IPR028261 Dihydroprymidine dehydrogenase domain II EP560_16410 IPR009051 Alpha-helical ferredoxin EP560_16410 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 EP560_16415 IPR017932 Glutamine amidotransferase type 2 domain EP560_16415 IPR002489 Glutamate synthase, alpha subunit, C-terminal EP560_16415 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily EP560_16415 IPR006982 Glutamate synthase, central-N EP560_16415 IPR002932 Glutamate synthase domain EP560_16415 IPR029055 Nucleophile aminohydrolases, N-terminal EP560_16415 IPR013785 Aldolase-type TIM barrel EP560_16425 IPR030963 3-dehydroquinate synthase family EP560_16425 IPR016037 3-dehydroquinate synthase AroB EP560_16425 IPR030960 3-dehydroquinate synthase domain EP560_16430 IPR023000 Shikimate kinase, conserved site EP560_16430 IPR000623 Shikimate kinase/Threonine synthase-like 1 EP560_16430 IPR031322 Shikimate kinase/gluconokinase EP560_16430 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_16435 IPR021731 AMIN domain EP560_16435 IPR038591 NolW-like superfamily EP560_16435 IPR013355 Type IV pilus secretin PilQ EP560_16435 IPR011662 Secretin/TonB, short N-terminal domain EP560_16435 IPR004846 Type II/III secretion system EP560_16435 IPR004845 Type II secretion system GspD, conserved site EP560_16435 IPR001775 GspD/PilQ family EP560_16435 IPR005644 NolW-like EP560_16460 IPR031376 Penicillin-binding protein, OB-like domain EP560_16460 IPR001460 Penicillin-binding protein, transpeptidase EP560_16460 IPR036950 Penicillin binding protein transglycosylase domain EP560_16460 IPR023346 Lysozyme-like domain superfamily EP560_16460 IPR001264 Glycosyl transferase, family 51 EP560_16460 IPR012338 Beta-lactamase/transpeptidase-like EP560_16465 IPR025714 Methyltransferase domain EP560_16465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_16465 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted EP560_16475 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase EP560_16475 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site EP560_16475 IPR000715 Glycosyl transferase, family 4 EP560_16480 IPR036615 Mur ligase, C-terminal domain superfamily EP560_16480 IPR013221 Mur ligase, central EP560_16480 IPR000713 Mur ligase, N-terminal catalytic domain EP560_16480 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase EP560_16480 IPR035911 MurE/MurF, N-terminal EP560_16480 IPR004101 Mur ligase, C-terminal EP560_16480 IPR036565 Mur-like, catalytic domain superfamily EP560_16485 IPR035911 MurE/MurF, N-terminal EP560_16485 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase EP560_16485 IPR000713 Mur ligase, N-terminal catalytic domain EP560_16485 IPR013221 Mur ligase, central EP560_16485 IPR036615 Mur ligase, C-terminal domain superfamily EP560_16485 IPR004101 Mur ligase, C-terminal EP560_16485 IPR036565 Mur-like, catalytic domain superfamily EP560_16490 IPR001460 Penicillin-binding protein, transpeptidase EP560_16490 IPR037532 Peptidoglycan D,D-transpeptidase FtsI EP560_16490 IPR012338 Beta-lactamase/transpeptidase-like EP560_16490 IPR036138 Penicillin-binding protein, dimerisation domain superfamily EP560_16490 IPR005311 Penicillin-binding protein, dimerisation domain EP560_16500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_16500 IPR002903 Ribosomal RNA small subunit methyltransferase H EP560_16500 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily EP560_16505 IPR000957 Sulphate/thiosulphate-binding, conserved site EP560_16505 IPR034408 Sulphate/thiosulphate-binding site EP560_16505 IPR005669 Thiosulphate/Sulfate-binding protein EP560_16515 IPR000924 Glutamyl/glutaminyl-tRNA synthetase EP560_16515 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding EP560_16515 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 EP560_16515 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial EP560_16515 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site EP560_16515 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain EP560_16515 IPR033910 Glutamyl-tRNA synthetase EP560_16515 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_16530 IPR004840 Amino acid permease, conserved site EP560_16530 IPR004841 Amino acid permease/ SLC12A domain EP560_16560 IPR036837 Cation efflux protein, cytoplasmic domain superfamily EP560_16560 IPR002524 Cation efflux protein EP560_16560 IPR027469 Cation efflux transmembrane domain superfamily EP560_16565 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA EP560_16565 IPR001036 Acriflavin resistance protein EP560_16565 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains EP560_16570 IPR006143 RND efflux pump, membrane fusion protein EP560_16570 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain EP560_16570 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB EP560_16590 IPR007318 Phospholipid methyltransferase EP560_16615 IPR003593 AAA+ ATPase domain EP560_16615 IPR003439 ABC transporter-like EP560_16615 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_16615 IPR032781 ABC-transporter extension domain EP560_16615 IPR022374 Energy-dependent translational throttle protein EttA EP560_16615 IPR017871 ABC transporter, conserved site EP560_16620 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase EP560_16620 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_16620 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_16620 IPR015424 Pyridoxal phosphate-dependent transferase EP560_16620 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme EP560_16625 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_16625 IPR036291 NAD(P)-binding domain superfamily EP560_16625 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_16630 IPR001902 SLC26A/SulP transporter EP560_16630 IPR011547 SLC26A/SulP transporter domain EP560_16630 IPR002645 STAS domain EP560_16630 IPR036513 STAS domain superfamily EP560_16635 IPR006641 YqgF/RNase H-like domain EP560_16635 IPR037027 YqgF/RNase H-like domain superfamily EP560_16635 IPR012340 Nucleic acid-binding, OB-fold EP560_16635 IPR018974 Tex-like protein, N-terminal EP560_16635 IPR023319 Tex-like protein, HTH domain superfamily EP560_16635 IPR023323 Tex-like domain superfamily EP560_16635 IPR003029 S1 domain EP560_16635 IPR032639 Tex protein, YqgF-like domain EP560_16635 IPR022967 RNA-binding domain, S1 EP560_16635 IPR010994 RuvA domain 2-like EP560_16635 IPR012337 Ribonuclease H-like superfamily EP560_16635 IPR041692 HHH domain 9 EP560_16640 IPR016032 Signal transduction response regulator, C-terminal effector EP560_16640 IPR001789 Signal transduction response regulator, receiver domain EP560_16640 IPR039420 Transcriptional regulatory protein WalR-like EP560_16640 IPR011006 CheY-like superfamily EP560_16640 IPR001867 OmpR/PhoB-type DNA-binding domain EP560_16640 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_16645 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP560_16645 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP560_16645 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP560_16645 IPR005467 Histidine kinase domain EP560_16645 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_16645 IPR003594 Histidine kinase/HSP90-like ATPase EP560_16645 IPR003660 HAMP domain EP560_16655 IPR003702 Acetyl-CoA hydrolase/transferase EP560_16655 IPR037171 NagB/RpiA transferase-like EP560_16655 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily EP560_16655 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain EP560_16655 IPR017821 Succinate CoA transferase EP560_16660 IPR000182 GNAT domain EP560_16660 IPR016181 Acyl-CoA N-acyltransferase EP560_16660 IPR023072 Acetyltransferase, YpeA EP560_16660 IPR017255 Acetyltransferase, GNAT, predicted EP560_16680 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily EP560_16680 IPR000807 Imidazoleglycerol-phosphate dehydratase EP560_16680 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site EP560_16680 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_16685 IPR010139 Imidazole glycerol phosphate synthase, subunit H EP560_16685 IPR017926 Glutamine amidotransferase EP560_16685 IPR029062 Class I glutamine amidotransferase-like EP560_16700 IPR011060 Ribulose-phosphate binding barrel EP560_16700 IPR013785 Aldolase-type TIM barrel EP560_16700 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA EP560_16700 IPR006062 Histidine biosynthesis EP560_16700 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase EP560_16715 IPR011008 Dimeric alpha-beta barrel EP560_16715 IPR007138 Antibiotic biosynthesis monooxygenase domain EP560_16730 IPR002575 Aminoglycoside phosphotransferase EP560_16730 IPR005280 Homoserine kinase, type II EP560_16730 IPR011009 Protein kinase-like domain superfamily EP560_16735 IPR013785 Aldolase-type TIM barrel EP560_16735 IPR011060 Ribulose-phosphate binding barrel EP560_16735 IPR006062 Histidine biosynthesis EP560_16735 IPR004651 Histidine biosynthesis, HisF EP560_16750 IPR023743 Aquaporin Z EP560_16750 IPR023271 Aquaporin-like EP560_16750 IPR000425 Major intrinsic protein EP560_16750 IPR034294 Aquaporin transporter EP560_16750 IPR022357 Major intrinsic protein, conserved site EP560_16775 IPR023051 Potassium uptake protein, low affinity, Kup EP560_16775 IPR003855 Potassium transporter EP560_16795 IPR029039 Flavoprotein-like superfamily EP560_16795 IPR003680 Flavodoxin-like fold EP560_16805 IPR036390 Winged helix DNA-binding domain superfamily EP560_16805 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_16805 IPR002577 Helix-turn-helix, HxlR type EP560_16805 IPR011991 ArsR-like helix-turn-helix domain EP560_16835 IPR018060 DNA binding HTH domain, AraC-type EP560_16835 IPR037923 Transcription regulator HTH-like EP560_16835 IPR009057 Homeobox-like domain superfamily EP560_16835 IPR018062 HTH domain AraC-type, conserved site EP560_16835 IPR014710 RmlC-like jelly roll fold EP560_16835 IPR003313 AraC-type arabinose-binding/dimerisation domain EP560_16835 IPR023699 Transcription activator HTH, RhaR EP560_16835 IPR020449 Transcription regulator HTH, AraC- type EP560_16840 IPR018170 Aldo/keto reductase, conserved site EP560_16840 IPR020471 Aldo/keto reductase EP560_16840 IPR023210 NADP-dependent oxidoreductase domain EP560_16840 IPR036812 NADP-dependent oxidoreductase domain superfamily EP560_16860 IPR005119 LysR, substrate-binding EP560_16860 IPR036390 Winged helix DNA-binding domain superfamily EP560_16860 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_16860 IPR000847 Transcription regulator HTH, LysR EP560_16865 IPR020846 Major facilitator superfamily domain EP560_16865 IPR011701 Major facilitator superfamily EP560_16865 IPR036259 MFS transporter superfamily EP560_16865 IPR005829 Sugar transporter, conserved site EP560_16905 IPR014105 Carotenoid/retinoid oxidoreductase EP560_16905 IPR002937 Amine oxidase EP560_16905 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_16910 IPR012093 Pirin EP560_16910 IPR008778 Pirin, C-terminal domain EP560_16910 IPR014710 RmlC-like jelly roll fold EP560_16910 IPR011051 RmlC-like cupin domain superfamily EP560_16910 IPR003829 Pirin, N-terminal domain EP560_16915 IPR000868 Isochorismatase-like EP560_16915 IPR036380 Isochorismatase-like superfamily EP560_16920 IPR000847 Transcription regulator HTH, LysR EP560_16920 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_16920 IPR036390 Winged helix DNA-binding domain superfamily EP560_16925 IPR010102 Succinate semialdehyde dehydrogenase EP560_16925 IPR015590 Aldehyde dehydrogenase domain EP560_16925 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_16925 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP560_16925 IPR016160 Aldehyde dehydrogenase, cysteine active site EP560_16925 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_16925 IPR016161 Aldehyde/histidinol dehydrogenase EP560_16930 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_16930 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_16930 IPR015424 Pyridoxal phosphate-dependent transferase EP560_16930 IPR005814 Aminotransferase class-III EP560_16930 IPR004632 4-aminobutyrate aminotransferase, bacterial EP560_16935 IPR036390 Winged helix DNA-binding domain superfamily EP560_16935 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_16935 IPR000524 Transcription regulator HTH, GntR EP560_16935 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_16935 IPR015424 Pyridoxal phosphate-dependent transferase EP560_16935 IPR004839 Aminotransferase, class I/classII EP560_16940 IPR004841 Amino acid permease/ SLC12A domain EP560_16940 IPR004840 Amino acid permease, conserved site EP560_16940 IPR011265 GABA permease EP560_16950 IPR011606 Branched-chain amino acid transport, permease EP560_16950 IPR004471 Branched-chain amino acid transport, AzlC EP560_16960 IPR011344 Single-stranded DNA-binding protein EP560_16960 IPR012340 Nucleic acid-binding, OB-fold EP560_16960 IPR000424 Primosome PriB/single-strand DNA-binding EP560_16965 IPR036259 MFS transporter superfamily EP560_16965 IPR020846 Major facilitator superfamily domain EP560_16965 IPR011701 Major facilitator superfamily EP560_16975 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase EP560_16975 IPR029056 Ribokinase-like EP560_16975 IPR016084 Haem oxygenase-like, multi-helical EP560_16975 IPR013785 Aldolase-type TIM barrel EP560_16975 IPR004305 Thiaminase-2/PQQC EP560_16975 IPR036206 Thiamin phosphate synthase superfamily EP560_16975 IPR034291 Thiamine phosphate synthase EP560_16975 IPR022998 Thiamine phosphate synthase/TenI EP560_16975 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase EP560_16980 IPR009707 Membrane protein GlpM/YdgC EP560_16995 IPR009057 Homeobox-like domain superfamily EP560_16995 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP560_16995 IPR011075 Tetracyclin repressor-like, C-terminal domain EP560_16995 IPR001647 DNA-binding HTH domain, TetR-type EP560_17000 IPR003439 ABC transporter-like EP560_17000 IPR017871 ABC transporter, conserved site EP560_17000 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_17000 IPR004602 UvrABC system subunit A EP560_17000 IPR041552 UvrA DNA-binding domain EP560_17000 IPR041102 UvrA, interaction domain EP560_17010 IPR033424 Membrane-associated sensor domain EP560_17010 IPR000160 GGDEF domain EP560_17010 IPR029787 Nucleotide cyclase EP560_17020 IPR000060 BCCT transporter family EP560_17020 IPR018093 BCCT transporter, conserved site EP560_17030 IPR014083 Cation/acetate symporter ActP EP560_17030 IPR038377 Sodium/glucose symporter superfamily EP560_17030 IPR001734 Sodium/solute symporter EP560_17030 IPR018212 Sodium/solute symporter, conserved site EP560_17035 IPR007436 Protein of unknown function DUF485 EP560_17040 IPR037952 Sensor histidine kinase TorS, sensor domain EP560_17040 IPR011006 CheY-like superfamily EP560_17040 IPR003660 HAMP domain EP560_17040 IPR003594 Histidine kinase/HSP90-like ATPase EP560_17040 IPR001789 Signal transduction response regulator, receiver domain EP560_17040 IPR038188 TorS, sensor domain superfamily EP560_17040 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_17040 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain EP560_17040 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP560_17040 IPR036641 HPT domain superfamily EP560_17040 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP560_17040 IPR005467 Histidine kinase domain EP560_17040 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP560_17050 IPR011006 CheY-like superfamily EP560_17050 IPR016032 Signal transduction response regulator, C-terminal effector EP560_17050 IPR000792 Transcription regulator LuxR, C-terminal EP560_17050 IPR001789 Signal transduction response regulator, receiver domain EP560_17055 IPR019912 FMN reductase, MsuE-like EP560_17055 IPR029039 Flavoprotein-like superfamily EP560_17055 IPR005025 NADPH-dependent FMN reductase-like EP560_17060 IPR011251 Luciferase-like domain EP560_17060 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG EP560_17060 IPR036661 Luciferase-like domain superfamily EP560_17065 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_17065 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP560_17065 IPR036390 Winged helix DNA-binding domain superfamily EP560_17065 IPR011008 Dimeric alpha-beta barrel EP560_17065 IPR000485 AsnC-type HTH domain EP560_17065 IPR019888 Transcription regulator AsnC-type EP560_17070 IPR000868 Isochorismatase-like EP560_17070 IPR036380 Isochorismatase-like superfamily EP560_17075 IPR000873 AMP-dependent synthetase/ligase EP560_17075 IPR042099 AMP-dependent synthetase-like superfamily EP560_17075 IPR011904 Acetate-CoA ligase EP560_17075 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain EP560_17075 IPR020845 AMP-binding, conserved site EP560_17075 IPR025110 AMP-binding enzyme, C-terminal domain EP560_17085 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 EP560_17085 IPR023408 Mechanosensitive ion channel MscS domain superfamily EP560_17085 IPR011066 Mechanosensitive ion channel MscS, C-terminal EP560_17085 IPR006685 Mechanosensitive ion channel MscS EP560_17085 IPR010920 LSM domain superfamily EP560_17085 IPR006686 Mechanosensitive ion channel MscS, conserved site EP560_17090 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal EP560_17090 IPR006700 Ribosomal RNA small subunit methyltransferase E EP560_17090 IPR029028 Alpha/beta knot methyltransferases EP560_17095 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal EP560_17095 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily EP560_17095 IPR039901 3-deoxy-D-manno-octulosonic acid transferase EP560_17100 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal EP560_17100 IPR013785 Aldolase-type TIM barrel EP560_17120 IPR003156 DHHA1 domain EP560_17120 IPR001667 DDH domain EP560_17120 IPR004610 Bacterial RecJ exonuclease EP560_17120 IPR041122 RecJ, OB domain EP560_17120 IPR038763 DHH phosphoesterase superfamily EP560_17125 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site EP560_17125 IPR012349 FMN-binding split barrel EP560_17125 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal EP560_17125 IPR000659 Pyridoxamine 5'-phosphate oxidase EP560_17125 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative EP560_17130 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I EP560_17130 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III EP560_17130 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II EP560_17130 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III EP560_17130 IPR006352 Phosphoglucosamine mutase, bacterial type EP560_17130 IPR005843 Alpha-D-phosphohexomutase, C-terminal EP560_17130 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily EP560_17130 IPR005841 Alpha-D-phosphohexomutase superfamily EP560_17130 IPR016066 Alpha-D-phosphohexomutase, conserved site EP560_17135 IPR015875 IMP dehydrogenase / GMP reductase, conserved site EP560_17135 IPR005990 Inosine-5'-monophosphate dehydrogenase EP560_17135 IPR000644 CBS domain EP560_17135 IPR013785 Aldolase-type TIM barrel EP560_17135 IPR001093 IMP dehydrogenase/GMP reductase EP560_17140 IPR005358 Putative zinc- or iron-chelating domain containing protein EP560_17145 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP560_17145 IPR001279 Metallo-beta-lactamase EP560_17145 IPR008254 Flavodoxin/nitric oxide synthase EP560_17145 IPR029039 Flavoprotein-like superfamily EP560_17145 IPR002563 Flavin reductase like domain EP560_17145 IPR001226 Flavodoxin, conserved site EP560_17145 IPR012349 FMN-binding split barrel EP560_17150 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_17150 IPR039423 TonB-dependent receptor-like EP560_17150 IPR012910 TonB-dependent receptor, plug domain EP560_17150 IPR010105 TonB-dependent siderophore receptor EP560_17150 IPR010917 TonB-dependent receptor, conserved site EP560_17150 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP560_17150 IPR010916 TonB box, conserved site EP560_17150 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_17155 IPR001727 Gdt1 family EP560_17165 IPR000089 Biotin/lipoyl attachment EP560_17165 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain EP560_17165 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily EP560_17165 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site EP560_17165 IPR036625 E3-binding domain superfamily EP560_17165 IPR004167 Peripheral subunit-binding domain EP560_17165 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex EP560_17165 IPR011053 Single hybrid motif EP560_17170 IPR041621 Pyruvate dehydrogenase E1 component, middle domain EP560_17170 IPR005474 Transketolase, N-terminal EP560_17170 IPR004660 Pyruvate dehydrogenase E1 component EP560_17170 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal EP560_17170 IPR029061 Thiamin diphosphate-binding fold EP560_17170 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II EP560_17175 IPR016047 Peptidase M23 EP560_17175 IPR011055 Duplicated hybrid motif EP560_17185 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase EP560_17185 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal EP560_17185 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_17185 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal EP560_17190 IPR003008 Tubulin/FtsZ, GTPase domain EP560_17190 IPR020805 Cell division protein FtsZ, conserved site EP560_17190 IPR024757 Cell division protein FtsZ, C-terminal EP560_17190 IPR008280 Tubulin/FtsZ, C-terminal EP560_17190 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain EP560_17190 IPR036525 Tubulin/FtsZ, GTPase domain superfamily EP560_17190 IPR000158 Cell division protein FtsZ EP560_17195 IPR003494 SHS2 domain inserted in FtsA EP560_17195 IPR020823 Cell division protein FtsA EP560_17200 IPR013685 POTRA domain, FtsQ-type EP560_17200 IPR026579 Cell division protein FtsQ EP560_17200 IPR005548 Cell division protein FtsQ/DivIB EP560_17200 IPR034746 POTRA domain EP560_17205 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site EP560_17205 IPR016185 Pre-ATP-grasp domain superfamily EP560_17205 IPR011127 D-alanine--D-alanine ligase, N-terminal domain EP560_17205 IPR005905 D-alanine--D-alanine ligase EP560_17205 IPR011095 D-alanine--D-alanine ligase, C-terminal EP560_17205 IPR011761 ATP-grasp fold EP560_17205 IPR013815 ATP-grasp fold, subdomain 1 EP560_17210 IPR004101 Mur ligase, C-terminal EP560_17210 IPR036615 Mur ligase, C-terminal domain superfamily EP560_17210 IPR000713 Mur ligase, N-terminal catalytic domain EP560_17210 IPR013221 Mur ligase, central EP560_17210 IPR036565 Mur-like, catalytic domain superfamily EP560_17210 IPR005758 UDP-N-acetylmuramate--L-alanine ligase EP560_17215 IPR004276 Glycosyltransferase family 28, N-terminal domain EP560_17215 IPR007235 Glycosyl transferase, family 28, C-terminal EP560_17215 IPR006009 N-acetylglucosaminyltransferase, MurG EP560_17220 IPR011761 ATP-grasp fold EP560_17220 IPR006284 Glutathione synthetase, prokaryotic EP560_17220 IPR004218 Prokaryotic glutathione synthetase, ATP-binding EP560_17220 IPR016185 Pre-ATP-grasp domain superfamily EP560_17220 IPR013815 ATP-grasp fold, subdomain 1 EP560_17220 IPR004215 Prokaryotic glutathione synthetase, N-terminal EP560_17235 IPR023031 Orotate phosphoribosyltransferase EP560_17235 IPR029057 Phosphoribosyltransferase-like EP560_17235 IPR000836 Phosphoribosyltransferase domain EP560_17235 IPR004467 Orotate phosphoribosyl transferase domain EP560_17240 IPR020848 AP endonuclease 1, conserved site EP560_17240 IPR036691 Endonuclease/exonuclease/phosphatase superfamily EP560_17240 IPR004808 AP endonuclease 1 EP560_17240 IPR020847 AP endonuclease 1, binding site EP560_17240 IPR005135 Endonuclease/exonuclease/phosphatase EP560_17245 IPR006504 Transcriptional regulator Spx/MgsR EP560_17245 IPR036249 Thioredoxin-like superfamily EP560_17245 IPR006660 Arsenate reductase-like EP560_17255 IPR002168 Lipase, GDXG, putative histidine active site EP560_17255 IPR029058 Alpha/Beta hydrolase fold EP560_17255 IPR033140 Lipase, GDXG, putative serine active site EP560_17255 IPR013094 Alpha/beta hydrolase fold-3 EP560_17260 IPR029787 Nucleotide cyclase EP560_17260 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region EP560_17260 IPR000160 GGDEF domain EP560_17265 IPR017937 Thioredoxin, conserved site EP560_17265 IPR035671 DsbD gamma EP560_17265 IPR013766 Thioredoxin domain EP560_17265 IPR036249 Thioredoxin-like superfamily EP560_17265 IPR022910 Thiol:disulphide interchange protein DsbD EP560_17265 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily EP560_17265 IPR003834 Cytochrome C biogenesis protein, transmembrane domain EP560_17265 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain EP560_17295 IPR014306 Hydroxyisourate hydrolase EP560_17295 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily EP560_17295 IPR023418 Transthyretin, thyroxine binding site EP560_17295 IPR023419 Transthyretin, conserved site EP560_17295 IPR023416 Transthyretin/hydroxyisourate hydrolase domain EP560_17300 IPR006042 Xanthine/uracil permease EP560_17300 IPR017588 Uric acid permease UacT-like EP560_17300 IPR006043 Xanthine/uracil/vitamin C permease EP560_17310 IPR002938 FAD-binding domain EP560_17310 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_17315 IPR008979 Galactose-binding-like domain superfamily EP560_17315 IPR015908 Allantoicase domain EP560_17315 IPR005164 Allantoicase EP560_17320 IPR024060 Ureidoglycolate lyase domain superfamily EP560_17320 IPR023525 Ureidoglycolate lyase, bacterial EP560_17320 IPR011051 RmlC-like cupin domain superfamily EP560_17320 IPR007247 Ureidoglycolate lyase EP560_17325 IPR036291 NAD(P)-binding domain superfamily EP560_17325 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_17330 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative EP560_17330 IPR006171 TOPRIM domain EP560_17330 IPR003594 Histidine kinase/HSP90-like ATPase EP560_17330 IPR018522 DNA topoisomerase, type IIA, conserved site EP560_17330 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 EP560_17330 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_17330 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal EP560_17330 IPR013760 DNA topoisomerase, type IIA-like domain superfamily EP560_17330 IPR001241 DNA topoisomerase, type IIA EP560_17330 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP560_17330 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_17330 IPR002288 DNA gyrase B subunit, C-terminal EP560_17335 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA EP560_17335 IPR029058 Alpha/Beta hydrolase fold EP560_17355 IPR024474 Zinc-finger binding domain of transposase IS66 EP560_17355 IPR024463 Transposase TnpC, homeodomain EP560_17355 IPR039552 Transposase IS66, C-terminal EP560_17355 IPR004291 Transposase, IS66 EP560_17365 IPR036779 LysM domain superfamily EP560_17365 IPR003132 Protein A, Ig-binding domain EP560_17365 IPR005038 Octapeptide repeat EP560_17365 IPR005877 YSIRK Gram-positive signal peptide EP560_17365 IPR019948 Gram-positive LPXTG cell wall anchor EP560_17365 IPR018392 LysM domain EP560_17365 IPR009063 Immunoglobulin/albumin-binding domain superfamily EP560_17365 IPR019931 LPXTG cell wall anchor domain EP560_17375 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset EP560_17375 IPR006531 Gp5 N-terminal EP560_17375 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein EP560_17375 IPR037026 Vgr protein, OB-fold domain superfamily EP560_17380 IPR023380 DsbB-like superfamily EP560_17380 IPR022920 Disulphide bond formation protein DsbB EP560_17380 IPR003752 Disulphide bond formation protein DsbB/BdbC EP560_17385 IPR006334 Glutamate--cysteine ligase, monofunctional EP560_17385 IPR007370 Glutamate--cysteine ligase EP560_17385 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain EP560_17400 IPR007383 Protein of unknown function DUF445 EP560_17405 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_17405 IPR004839 Aminotransferase, class I/classII EP560_17405 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_17405 IPR015424 Pyridoxal phosphate-dependent transferase EP560_17410 IPR002528 Multi antimicrobial extrusion protein EP560_17415 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_17415 IPR036291 NAD(P)-binding domain superfamily EP560_17415 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_17425 IPR016032 Signal transduction response regulator, C-terminal effector EP560_17425 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB EP560_17425 IPR001789 Signal transduction response regulator, receiver domain EP560_17425 IPR011006 CheY-like superfamily EP560_17425 IPR039420 Transcriptional regulatory protein WalR-like EP560_17425 IPR001867 OmpR/PhoB-type DNA-binding domain EP560_17425 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_17430 IPR035965 PAS domain superfamily EP560_17430 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR EP560_17430 IPR003594 Histidine kinase/HSP90-like ATPase EP560_17430 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP560_17430 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP560_17430 IPR013767 PAS fold EP560_17430 IPR021766 Phosphate regulon sensor protein PhoR EP560_17430 IPR000014 PAS domain EP560_17430 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP560_17430 IPR005467 Histidine kinase domain EP560_17430 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP560_17440 IPR006061 Solute-binding family 1, conserved site EP560_17440 IPR006059 Bacterial extracellular solute-binding protein EP560_17440 IPR026045 Ferric binding protein EP560_17445 IPR004304 Acetamidase/Formamidase EP560_17450 IPR033177 Phosphatidylserine decarboxylase EP560_17450 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 EP560_17450 IPR003817 Phosphatidylserine decarboxylase-related EP560_17455 IPR036873 Rhodanese-like domain superfamily EP560_17455 IPR001307 Thiosulphate sulfurtransferase, conserved site EP560_17455 IPR001763 Rhodanese-like domain EP560_17460 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal EP560_17460 IPR007229 Nicotinate phosphoribosyltransferase family EP560_17460 IPR006406 Nicotinate phosphoribosyltransferase EP560_17460 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase EP560_17460 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain EP560_17470 IPR024708 Catalase active site EP560_17470 IPR018028 Catalase, mono-functional, haem-containing EP560_17470 IPR020835 Catalase superfamily EP560_17470 IPR037060 Catalase core domain superfamily EP560_17470 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 EP560_17470 IPR002226 Catalase haem-binding site EP560_17470 IPR010582 Catalase immune-responsive domain EP560_17470 IPR011614 Catalase core domain EP560_17475 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily EP560_17475 IPR003732 D-aminoacyl-tRNA deacylase DTD EP560_17495 IPR023214 HAD superfamily EP560_17495 IPR023190 Phosphoserine phosphatase, domain 2 EP560_17495 IPR002912 ACT domain EP560_17495 IPR036412 HAD-like superfamily EP560_17505 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily EP560_17505 IPR036144 RibA-like superfamily EP560_17505 IPR032677 GTP cyclohydrolase II EP560_17505 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB EP560_17510 IPR034964 Lumazine synthase EP560_17510 IPR002180 Lumazine/riboflavin synthase EP560_17510 IPR036467 Lumazine/riboflavin synthase superfamily EP560_17515 IPR006027 NusB/RsmB/TIM44 EP560_17515 IPR011605 NusB antitermination factor EP560_17515 IPR035926 NusB-like superfamily EP560_17520 IPR036921 PurM-like, N-terminal domain superfamily EP560_17520 IPR010918 PurM-like, C-terminal domain EP560_17520 IPR006283 Thiamine-monophosphate kinase EP560_17520 IPR016188 PurM-like, N-terminal domain EP560_17520 IPR036676 PurM-like, C-terminal domain superfamily EP560_17525 IPR036681 PgpA-like superfamily EP560_17525 IPR026037 Phosphatidylglycerophosphatase A EP560_17525 IPR007686 YutG/PgpA domain EP560_17530 IPR029044 Nucleotide-diphospho-sugar transferases EP560_17530 IPR001451 Hexapeptide repeat EP560_17530 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase EP560_17530 IPR038009 GlmU, C-terminal LbH domain EP560_17530 IPR011004 Trimeric LpxA-like superfamily EP560_17530 IPR025877 MobA-like NTP transferase EP560_17530 IPR018357 Hexapeptide transferase, conserved site EP560_17535 IPR001347 Sugar isomerase (SIS) EP560_17535 IPR017932 Glutamine amidotransferase type 2 domain EP560_17535 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising EP560_17535 IPR029055 Nucleophile aminohydrolases, N-terminal EP560_17535 IPR035466 GlmS/AgaS, SIS domain 1 EP560_17535 IPR035490 GlmS/FrlB, SIS domain 2 EP560_17540 IPR011335 Restriction endonuclease type II-like EP560_17540 IPR014832 TnsA endonuclease C-terminal EP560_17540 IPR036390 Winged helix DNA-binding domain superfamily EP560_17540 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_17540 IPR014833 TnsA endonuclease, N-terminal EP560_17540 IPR011856 tRNA endonuclease-like domain superfamily EP560_17545 IPR036397 Ribonuclease H superfamily EP560_17545 IPR012337 Ribonuclease H-like superfamily EP560_17545 IPR001584 Integrase, catalytic core EP560_17550 IPR003593 AAA+ ATPase domain EP560_17550 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_17550 IPR021542 Tn7 transposition regulator TnsC EP560_17555 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl EP560_17555 IPR009492 TniQ EP560_17570 IPR012327 D12 class N6 adenine-specific DNA methyltransferase EP560_17570 IPR023095 Adenine-specific methyltransferase, domain 2 EP560_17570 IPR002052 DNA methylase, N-6 adenine-specific, conserved site EP560_17570 IPR012263 Adenine modification methylase, M.EcoRV-type EP560_17570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_17580 IPR018187 Asp/Glu racemase, active site 1 EP560_17580 IPR033134 Asp/Glu racemase, active site 2 EP560_17580 IPR004391 Glutamate racemase EP560_17580 IPR001920 Asp/Glu racemase EP560_17580 IPR015942 Asp/Glu/hydantoin racemase EP560_17595 IPR023696 Ureohydrolase domain superfamily EP560_17595 IPR005923 Formiminoglutamase EP560_17595 IPR006035 Ureohydrolase EP560_17595 IPR020855 Ureohydrolase, manganese-binding site EP560_17600 IPR032466 Metal-dependent hydrolase EP560_17600 IPR005920 Imidazolonepropionase EP560_17600 IPR006680 Amidohydrolase-related EP560_17600 IPR011059 Metal-dependent hydrolase, composite domain superfamily EP560_17605 IPR004841 Amino acid permease/ SLC12A domain EP560_17605 IPR004840 Amino acid permease, conserved site EP560_17610 IPR024083 Fumarase/histidase, N-terminal EP560_17610 IPR001106 Aromatic amino acid lyase EP560_17610 IPR008948 L-Aspartase-like EP560_17610 IPR022313 Phenylalanine/histidine ammonia-lyases, active site EP560_17610 IPR005921 Histidine ammonia-lyase EP560_17615 IPR035400 Urocanase, N-terminal domain EP560_17615 IPR035085 Urocanase, Rossmann-like domain EP560_17615 IPR036190 Urocanase superfamily EP560_17615 IPR023637 Urocanase EP560_17615 IPR035401 Urocanase, C-terminal domain EP560_17615 IPR038364 Urocanase, central domain superfamily EP560_17615 IPR023636 Urocanase conserved site EP560_17620 IPR011051 RmlC-like cupin domain superfamily EP560_17620 IPR010282 Uncharacterised protein family HutD/Ves EP560_17620 IPR014710 RmlC-like jelly roll fold EP560_17625 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily EP560_17625 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_17625 IPR011663 UbiC transcription regulator-associated EP560_17625 IPR000524 Transcription regulator HTH, GntR EP560_17625 IPR010248 Histidine utilization repressor EP560_17625 IPR036390 Winged helix DNA-binding domain superfamily EP560_17635 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal EP560_17635 IPR003495 CobW/HypB/UreG, nucleotide-binding domain EP560_17635 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_17645 IPR004840 Amino acid permease, conserved site EP560_17645 IPR004841 Amino acid permease/ SLC12A domain EP560_17655 IPR036282 Glutathione S-transferase, C-terminal domain superfamily EP560_17655 IPR036249 Thioredoxin-like superfamily EP560_17655 IPR034333 Glutathione S-transferases, class Zeta , N-terminal EP560_17655 IPR005955 Glutathione S-transferases, class Zeta EP560_17655 IPR040079 Glutathione Transferase family EP560_17655 IPR010987 Glutathione S-transferase, C-terminal-like EP560_17655 IPR004045 Glutathione S-transferase, N-terminal EP560_17655 IPR004046 Glutathione S-transferase, C-terminal EP560_17655 IPR034330 Glutathione S-transferases, class Zeta , C-terminal EP560_17660 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase EP560_17660 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain EP560_17660 IPR022858 Metallothiol transferase FosB EP560_17660 IPR037523 Vicinal oxygen chelate (VOC) domain EP560_17670 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal EP560_17670 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal EP560_17670 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase EP560_17670 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain EP560_17670 IPR005956 4-hydroxyphenylpyruvate dioxygenase EP560_17670 IPR037523 Vicinal oxygen chelate (VOC) domain EP560_17675 IPR007553 Domain of unknown function DUF523 EP560_17680 IPR002528 Multi antimicrobial extrusion protein EP560_17685 IPR038770 Sodium/solute symporter superfamily EP560_17685 IPR004710 Bile acid:sodium symporter EP560_17685 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 EP560_17690 IPR036380 Isochorismatase-like superfamily EP560_17690 IPR000868 Isochorismatase-like EP560_17695 IPR020624 Schiff base-forming aldolase, conserved site EP560_17695 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA EP560_17695 IPR002220 DapA-like EP560_17695 IPR013785 Aldolase-type TIM barrel EP560_17695 IPR020625 Schiff base-forming aldolase, active site EP560_17705 IPR028923 SAICAR synthetase/ADE2, N-terminal EP560_17705 IPR018236 SAICAR synthetase, conserved site EP560_17705 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase EP560_17705 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase EP560_17720 IPR023271 Aquaporin-like EP560_17720 IPR000292 Formate/nitrite transporter EP560_17725 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal EP560_17725 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_17725 IPR003959 ATPase, AAA-type, core EP560_17725 IPR003593 AAA+ ATPase domain EP560_17725 IPR032423 AAA C-terminal domain EP560_17725 IPR021886 MgsA AAA+ ATPase C-terminal EP560_17730 IPR011042 Six-bladed beta-propeller, TolB-like EP560_17730 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase EP560_17730 IPR012938 Glucose/Sorbosone dehydrogenase EP560_17735 IPR008228 Uncharacterised conserved protein UCP006173 EP560_17735 IPR005358 Putative zinc- or iron-chelating domain containing protein EP560_17740 IPR009760 Protein of unknown function DUF1328 EP560_17745 IPR029058 Alpha/Beta hydrolase fold EP560_17745 IPR003140 Phospholipase/carboxylesterase/thioesterase EP560_17755 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif EP560_17755 IPR011257 DNA glycosylase EP560_17755 IPR003265 HhH-GPD domain EP560_17755 IPR004035 Endonuclease III, iron-sulphur binding site EP560_17755 IPR029119 MutY, C-terminal EP560_17755 IPR015797 NUDIX hydrolase-like domain superfamily EP560_17755 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal EP560_17755 IPR000445 Helix-hairpin-helix motif EP560_17755 IPR005760 A/G-specific adenine glycosylase MutY EP560_17755 IPR004036 Endonuclease III-like, conserved site-2 EP560_17770 IPR005019 Methyladenine glycosylase EP560_17770 IPR004597 DNA-3-methyladenine glycosylase I EP560_17770 IPR011257 DNA glycosylase EP560_17775 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site EP560_17775 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 EP560_17775 IPR011032 GroES-like superfamily EP560_17775 IPR036291 NAD(P)-binding domain superfamily EP560_17775 IPR020843 Polyketide synthase, enoylreductase domain EP560_17775 IPR013154 Alcohol dehydrogenase, N-terminal EP560_17775 IPR013149 Alcohol dehydrogenase, C-terminal EP560_17780 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_17780 IPR000524 Transcription regulator HTH, GntR EP560_17780 IPR036390 Winged helix DNA-binding domain superfamily EP560_17780 IPR004839 Aminotransferase, class I/classII EP560_17780 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_17780 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_17780 IPR015424 Pyridoxal phosphate-dependent transferase EP560_17795 IPR036390 Winged helix DNA-binding domain superfamily EP560_17795 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_17795 IPR000847 Transcription regulator HTH, LysR EP560_17795 IPR005119 LysR, substrate-binding EP560_17800 IPR023210 NADP-dependent oxidoreductase domain EP560_17800 IPR018170 Aldo/keto reductase, conserved site EP560_17800 IPR036812 NADP-dependent oxidoreductase domain superfamily EP560_17800 IPR020471 Aldo/keto reductase EP560_17805 IPR011701 Major facilitator superfamily EP560_17805 IPR020846 Major facilitator superfamily domain EP560_17805 IPR036259 MFS transporter superfamily EP560_17815 IPR036291 NAD(P)-binding domain superfamily EP560_17815 IPR000846 Dihydrodipicolinate reductase, N-terminal EP560_17815 IPR022663 Dihydrodipicolinate reductase, C-terminal EP560_17815 IPR023940 Dihydrodipicolinate reductase EP560_17815 IPR022664 Dihydrodipicolinate reductase, conserved site EP560_17825 IPR018253 DnaJ domain, conserved site EP560_17825 IPR036869 Chaperone J-domain superfamily EP560_17825 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily EP560_17825 IPR001305 Heat shock protein DnaJ, cysteine-rich domain EP560_17825 IPR008971 HSP40/DnaJ peptide-binding EP560_17825 IPR001623 DnaJ domain EP560_17825 IPR002939 Chaperone DnaJ, C-terminal EP560_17825 IPR012724 Chaperone DnaJ EP560_17835 IPR001036 Acriflavin resistance protein EP560_17835 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains EP560_17840 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain EP560_17840 IPR030190 Macrolide export protein MacA EP560_17840 IPR006143 RND efflux pump, membrane fusion protein EP560_17845 IPR013572 Transcription regulator MAATS, C-terminal EP560_17845 IPR023772 DNA-binding HTH domain, TetR-type, conserved site EP560_17845 IPR001647 DNA-binding HTH domain, TetR-type EP560_17845 IPR009057 Homeobox-like domain superfamily EP560_17845 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP560_17850 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily EP560_17850 IPR033129 Phosphoenolpyruvate carboxylase, His active site EP560_17850 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site EP560_17850 IPR021135 Phosphoenolpyruvate carboxylase EP560_17850 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type EP560_17855 IPR006043 Xanthine/uracil/vitamin C permease EP560_17855 IPR006042 Xanthine/uracil permease EP560_17855 IPR019918 Pyrimidine permease RutG, predicted EP560_17860 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_17860 IPR005119 LysR, substrate-binding EP560_17860 IPR036390 Winged helix DNA-binding domain superfamily EP560_17860 IPR000847 Transcription regulator HTH, LysR EP560_17875 IPR037237 IlvD/EDD, N-terminal domain EP560_17875 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase EP560_17875 IPR004404 Dihydroxy-acid dehydratase EP560_17875 IPR042096 Dihydroxy-acid dehydratase, C-terminal EP560_17875 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site EP560_17880 IPR011034 Formyl transferase-like, C-terminal domain superfamily EP560_17880 IPR005794 Methionyl-tRNA formyltransferase EP560_17880 IPR005793 Formyl transferase, C-terminal EP560_17880 IPR037022 Formyl transferase, C-terminal domain superfamily EP560_17880 IPR002376 Formyl transferase, N-terminal EP560_17880 IPR036477 Formyl transferase, N-terminal domain superfamily EP560_17880 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain EP560_17885 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site EP560_17885 IPR035926 NusB-like superfamily EP560_17885 IPR006027 NusB/RsmB/TIM44 EP560_17885 IPR023267 RNA (C5-cytosine) methyltransferase EP560_17885 IPR004573 rRNA small subunit methyltransferase B EP560_17885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_17885 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type EP560_17895 IPR037272 Sodium:neurotransmitter symporter superfamily EP560_17895 IPR000175 Sodium:neurotransmitter symporter EP560_17935 IPR001647 DNA-binding HTH domain, TetR-type EP560_17935 IPR009057 Homeobox-like domain superfamily EP560_17935 IPR023772 DNA-binding HTH domain, TetR-type, conserved site EP560_17960 IPR036821 Peptide deformylase superfamily EP560_17960 IPR023635 Peptide deformylase EP560_17970 IPR003488 DNA recombination-mediator protein A EP560_17970 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_17970 IPR041614 DprA, winged helix domain EP560_17975 IPR006070 YrdC-like domain EP560_17975 IPR023535 Threonylcarbamoyl-AMP synthase EP560_17975 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily EP560_17980 IPR000620 EamA domain EP560_17985 IPR009057 Homeobox-like domain superfamily EP560_17985 IPR001647 DNA-binding HTH domain, TetR-type EP560_17985 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP560_17990 IPR036259 MFS transporter superfamily EP560_17990 IPR020846 Major facilitator superfamily domain EP560_17990 IPR011701 Major facilitator superfamily EP560_18000 IPR033674 Thioredoxin/glutathione peroxidase BtuE EP560_18000 IPR000889 Glutathione peroxidase EP560_18000 IPR029760 Glutathione peroxidase conserved site EP560_18000 IPR036249 Thioredoxin-like superfamily EP560_18000 IPR029759 Glutathione peroxidase active site EP560_18010 IPR022548 Domain of unknown function DUF2846 EP560_18010 IPR016596 Protein of unknown function UCP012335 EP560_18015 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal EP560_18015 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal EP560_18015 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit EP560_18015 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily EP560_18020 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain EP560_18020 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site EP560_18020 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain EP560_18020 IPR005722 ATP synthase, F1 complex, beta subunit EP560_18020 IPR003593 AAA+ ATPase domain EP560_18020 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal EP560_18020 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily EP560_18020 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_18025 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily EP560_18025 IPR000131 ATP synthase, F1 complex, gamma subunit EP560_18025 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site EP560_18030 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily EP560_18030 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site EP560_18030 IPR005294 ATP synthase, F1 complex, alpha subunit EP560_18030 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain EP560_18030 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily EP560_18030 IPR000793 ATP synthase, alpha subunit, C-terminal EP560_18030 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily EP560_18030 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain EP560_18030 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain EP560_18030 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_18035 IPR000711 ATPase, OSCP/delta subunit EP560_18035 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily EP560_18035 IPR020781 ATPase, OSCP/delta subunit, conserved site EP560_18040 IPR005864 ATP synthase, F0 complex, subunit b, bacterial EP560_18040 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily EP560_18040 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast EP560_18045 IPR000454 ATP synthase, F0 complex, subunit C EP560_18045 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast EP560_18045 IPR038662 F1F0 ATP synthase subunit C superfamily EP560_18045 IPR002379 V-ATPase proteolipid subunit C-like domain EP560_18045 IPR035921 F/V-ATP synthase subunit C superfamily EP560_18045 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site EP560_18050 IPR000568 ATP synthase, F0 complex, subunit A EP560_18050 IPR035908 ATP synthase, F0 complex, subunit A superfamily EP560_18050 IPR023011 ATP synthase, F0 complex, subunit A, active site EP560_18070 IPR003439 ABC transporter-like EP560_18070 IPR017871 ABC transporter, conserved site EP560_18070 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_18070 IPR017882 Zinc import ATP-binding protein ZnuC EP560_18070 IPR003593 AAA+ ATPase domain EP560_18075 IPR037294 ABC transporter, BtuC-like EP560_18075 IPR001626 ABC transporter, TroCD-like EP560_18080 IPR001123 Amino acid exporter protein, LeuE-type EP560_18080 IPR004778 Homoserine/Threonine efflux protein EP560_18085 IPR011008 Dimeric alpha-beta barrel EP560_18085 IPR006314 Dyp-type peroxidase EP560_18090 IPR012301 Malic enzyme, N-terminal domain EP560_18090 IPR023667 NAD-dependent malic enzyme, proteobacteria EP560_18090 IPR036291 NAD(P)-binding domain superfamily EP560_18090 IPR001891 Malic oxidoreductase EP560_18090 IPR012302 Malic enzyme, NAD-binding EP560_18090 IPR037062 Malic enzyme, N-terminal domain superfamily EP560_18090 IPR015884 Malic enzyme, conserved site EP560_18095 IPR005148 Arginyl tRNA synthetase N-terminal domain EP560_18095 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding EP560_18095 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily EP560_18095 IPR008909 DALR anticodon binding EP560_18095 IPR001278 Arginine-tRNA ligase EP560_18095 IPR035684 Arginyl-tRNA synthetase, catalytic core domain EP560_18115 IPR014710 RmlC-like jelly roll fold EP560_18115 IPR011051 RmlC-like cupin domain superfamily EP560_18115 IPR008778 Pirin, C-terminal domain EP560_18115 IPR003829 Pirin, N-terminal domain EP560_18115 IPR012093 Pirin EP560_18125 IPR005149 Transcription regulator PadR, N-terminal EP560_18125 IPR036390 Winged helix DNA-binding domain superfamily EP560_18125 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_18145 IPR002934 Polymerase, nucleotidyl transferase domain EP560_18145 IPR025184 Domain of unknown function DUF4111 EP560_18145 IPR024172 Streptomycin 3''-adenylyltransferase EP560_18150 IPR017926 Glutamine amidotransferase EP560_18150 IPR022955 GMP synthase EP560_18150 IPR025777 GMP synthetase ATP pyrophosphatase domain EP560_18150 IPR022310 NAD/GMP synthase EP560_18150 IPR004739 GMP synthase, glutamine amidotransferase EP560_18150 IPR001674 GMP synthase, C-terminal EP560_18150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_18150 IPR029062 Class I glutamine amidotransferase-like EP560_18155 IPR016991 Protein of unknown function UCP032178 EP560_18155 IPR007383 Protein of unknown function DUF445 EP560_18160 IPR032808 DoxX family EP560_18165 IPR032818 DedA family EP560_18165 IPR032816 SNARE associated Golgi protein EP560_18180 IPR025669 AAA domain EP560_18180 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_18190 IPR036065 BolA-like superfamily EP560_18190 IPR002634 BolA protein EP560_18205 IPR008278 4'-phosphopantetheinyl transferase domain EP560_18205 IPR037143 4'-phosphopantetheinyl transferase domain superfamily EP560_18205 IPR004568 Phosphopantetheine-protein transferase domain EP560_18210 IPR016040 NAD(P)-binding domain EP560_18210 IPR036291 NAD(P)-binding domain superfamily EP560_18210 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_18210 IPR005888 dTDP-glucose 4,6-dehydratase EP560_18230 IPR014030 Beta-ketoacyl synthase, N-terminal EP560_18230 IPR042104 Polyketide synthase, dehydratase domain superfamily EP560_18230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_18230 IPR020807 Polyketide synthase, dehydratase domain EP560_18230 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain EP560_18230 IPR020615 Thiolase, acyl-enzyme intermediate active site EP560_18230 IPR032821 Ketoacyl-synthetase, C-terminal extension EP560_18230 IPR029058 Alpha/Beta hydrolase fold EP560_18230 IPR001031 Thioesterase EP560_18230 IPR036736 ACP-like superfamily EP560_18230 IPR018201 Beta-ketoacyl synthase, active site EP560_18230 IPR014031 Beta-ketoacyl synthase, C-terminal EP560_18230 IPR009081 Phosphopantetheine binding ACP domain EP560_18230 IPR016039 Thiolase-like EP560_18230 IPR013217 Methyltransferase type 12 EP560_18230 IPR020806 Polyketide synthase, phosphopantetheine-binding domain EP560_18230 IPR006162 Phosphopantetheine attachment site EP560_18235 IPR006089 Acyl-CoA dehydrogenase, conserved site EP560_18235 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_18235 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_18235 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_18235 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_18235 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_18235 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_18240 IPR000873 AMP-dependent synthetase/ligase EP560_18240 IPR042099 AMP-dependent synthetase-like superfamily EP560_18245 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain EP560_18245 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily EP560_18245 IPR000792 Transcription regulator LuxR, C-terminal EP560_18245 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_18245 IPR016032 Signal transduction response regulator, C-terminal effector EP560_18255 IPR001690 Autoinducer synthase EP560_18255 IPR016181 Acyl-CoA N-acyltransferase EP560_18260 IPR004736 MFS transporter, metabolite:H symporter EP560_18260 IPR036259 MFS transporter superfamily EP560_18260 IPR005828 Major facilitator, sugar transporter-like EP560_18260 IPR011701 Major facilitator superfamily EP560_18260 IPR005829 Sugar transporter, conserved site EP560_18260 IPR020846 Major facilitator superfamily domain EP560_18265 IPR001753 Enoyl-CoA hydratase/isomerase EP560_18265 IPR014748 Enoyl-CoA hydratase, C-terminal EP560_18265 IPR029045 ClpP/crotonase-like domain superfamily EP560_18265 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site EP560_18270 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site EP560_18270 IPR014748 Enoyl-CoA hydratase, C-terminal EP560_18270 IPR029045 ClpP/crotonase-like domain superfamily EP560_18270 IPR001753 Enoyl-CoA hydratase/isomerase EP560_18275 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP560_18275 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP560_18275 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP560_18275 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP560_18275 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP560_18275 IPR006089 Acyl-CoA dehydrogenase, conserved site EP560_18275 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP560_18280 IPR042099 AMP-dependent synthetase-like superfamily EP560_18280 IPR000873 AMP-dependent synthetase/ligase EP560_18280 IPR025110 AMP-binding enzyme, C-terminal domain EP560_18280 IPR020845 AMP-binding, conserved site EP560_18285 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain EP560_18285 IPR036291 NAD(P)-binding domain superfamily EP560_18285 IPR015815 3-hydroxyisobutyrate dehydrogenase-related EP560_18285 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site EP560_18285 IPR013328 6-phosphogluconate dehydrogenase, domain 2 EP560_18285 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP560_18285 IPR011548 3-hydroxyisobutyrate dehydrogenase EP560_18285 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding EP560_18290 IPR015590 Aldehyde dehydrogenase domain EP560_18290 IPR010061 Methylmalonate-semialdehyde dehydrogenase EP560_18290 IPR016160 Aldehyde dehydrogenase, cysteine active site EP560_18290 IPR016161 Aldehyde/histidinol dehydrogenase EP560_18290 IPR016162 Aldehyde dehydrogenase, N-terminal EP560_18290 IPR016163 Aldehyde dehydrogenase, C-terminal EP560_18300 IPR004841 Amino acid permease/ SLC12A domain EP560_18300 IPR004840 Amino acid permease, conserved site EP560_18305 IPR004840 Amino acid permease, conserved site EP560_18305 IPR004841 Amino acid permease/ SLC12A domain EP560_18310 IPR006175 YjgF/YER057c/UK114 family EP560_18310 IPR035709 RutC family, YoaB-like EP560_18310 IPR019897 RidA, conserved site EP560_18310 IPR035959 RutC-like superfamily EP560_18315 IPR000821 Alanine racemase EP560_18315 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal EP560_18315 IPR011079 Alanine racemase, C-terminal EP560_18315 IPR001608 Alanine racemase, N-terminal EP560_18315 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site EP560_18315 IPR029066 PLP-binding barrel EP560_18320 IPR023080 D-amino acid dehydrogenase DadA EP560_18320 IPR006076 FAD dependent oxidoreductase EP560_18320 IPR036188 FAD/NAD(P)-binding domain superfamily EP560_18325 IPR011991 ArsR-like helix-turn-helix domain EP560_18325 IPR019888 Transcription regulator AsnC-type EP560_18325 IPR036390 Winged helix DNA-binding domain superfamily EP560_18325 IPR000485 AsnC-type HTH domain EP560_18325 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_18325 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP560_18325 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP560_18325 IPR011008 Dimeric alpha-beta barrel EP560_18335 IPR039423 TonB-dependent receptor-like EP560_18335 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_18335 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP560_18335 IPR010105 TonB-dependent siderophore receptor EP560_18335 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_18335 IPR012910 TonB-dependent receptor, plug domain EP560_18350 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP560_18350 IPR006225 Pseudouridine synthase, RluC/RluD EP560_18350 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site EP560_18350 IPR006145 Pseudouridine synthase, RsuA/RluA EP560_18400 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain EP560_18400 IPR036008 Aconitase, iron-sulfur domain EP560_18400 IPR006249 Aconitase/Iron-responsive element-binding protein 2 EP560_18400 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel EP560_18400 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain EP560_18400 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 EP560_18400 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent EP560_18405 IPR002020 Citrate synthase EP560_18405 IPR016142 Citrate synthase-like, large alpha subdomain EP560_18405 IPR016143 Citrate synthase-like, small alpha subdomain EP560_18405 IPR019810 Citrate synthase active site EP560_18405 IPR024176 Citrate synthase, bacterial-type EP560_18405 IPR036969 Citrate synthase superfamily EP560_18405 IPR011278 2-methylcitrate synthase/citrate synthase type I EP560_18410 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily EP560_18410 IPR040442 Pyruvate kinase-like domain superfamily EP560_18410 IPR012695 2-methylisocitrate lyase EP560_18410 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site EP560_18410 IPR039556 ICL/PEPM domain EP560_18415 IPR008920 Transcription regulator FadR/GntR, C-terminal EP560_18415 IPR011711 GntR, C-terminal EP560_18415 IPR000485 AsnC-type HTH domain EP560_18415 IPR000524 Transcription regulator HTH, GntR EP560_18415 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_18415 IPR036390 Winged helix DNA-binding domain superfamily EP560_18425 IPR000796 Aspartate/other aminotransferase EP560_18425 IPR004839 Aminotransferase, class I/classII EP560_18425 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_18425 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site EP560_18425 IPR015424 Pyridoxal phosphate-dependent transferase EP560_18425 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_18430 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 EP560_18430 IPR006094 FAD linked oxidase, N-terminal EP560_18430 IPR016167 FAD-binding, type PCMH, subdomain 1 EP560_18430 IPR016164 FAD-linked oxidase-like, C-terminal EP560_18430 IPR016169 FAD-binding, type PCMH, subdomain 2 EP560_18430 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 EP560_18430 IPR012256 D-lactate dehydrogenase EP560_18430 IPR036318 FAD-binding, type PCMH-like superfamily EP560_18430 IPR016166 FAD-binding domain, PCMH-type EP560_18430 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal EP560_18435 IPR020920 L-lactate dehydrogenase, bacterial EP560_18435 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent EP560_18435 IPR000262 FMN-dependent dehydrogenase EP560_18435 IPR037396 FMN hydroxy acid dehydrogenase domain EP560_18435 IPR013785 Aldolase-type TIM barrel EP560_18435 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site EP560_18440 IPR036390 Winged helix DNA-binding domain superfamily EP560_18440 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_18440 IPR000524 Transcription regulator HTH, GntR EP560_18440 IPR008920 Transcription regulator FadR/GntR, C-terminal EP560_18440 IPR011711 GntR, C-terminal EP560_18445 IPR003804 L-lactate permease EP560_18450 IPR005843 Alpha-D-phosphohexomutase, C-terminal EP560_18450 IPR005841 Alpha-D-phosphohexomutase superfamily EP560_18450 IPR016066 Alpha-D-phosphohexomutase, conserved site EP560_18450 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily EP560_18450 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III EP560_18450 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I EP560_18450 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III EP560_18450 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II EP560_18460 IPR016040 NAD(P)-binding domain EP560_18460 IPR005886 UDP-glucose 4-epimerase EP560_18460 IPR036291 NAD(P)-binding domain superfamily EP560_18465 IPR035482 Phosphoglucose isomerase, SIS domain 2 EP560_18465 IPR035476 Phosphoglucose isomerase, SIS domain 1 EP560_18465 IPR018189 Phosphoglucose isomerase, conserved site EP560_18465 IPR023096 Phosphoglucose isomerase, C-terminal EP560_18465 IPR001672 Phosphoglucose isomerase (PGI) EP560_18470 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation EP560_18470 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal EP560_18470 IPR017476 UDP-glucose/GDP-mannose dehydrogenase EP560_18470 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type EP560_18470 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP560_18470 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal EP560_18470 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily EP560_18470 IPR036291 NAD(P)-binding domain superfamily EP560_18475 IPR005835 Nucleotidyl transferase domain EP560_18475 IPR029044 Nucleotide-diphospho-sugar transferases EP560_18475 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type EP560_18480 IPR003362 Bacterial sugar transferase EP560_18485 IPR001173 Glycosyltransferase 2-like EP560_18485 IPR029044 Nucleotide-diphospho-sugar transferases EP560_18490 IPR001296 Glycosyl transferase, family 1 EP560_18505 IPR017814 Mycothiol biosynthesis protein, MshA EP560_18505 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain EP560_18505 IPR001296 Glycosyl transferase, family 1 EP560_18510 IPR001451 Hexapeptide repeat EP560_18510 IPR011004 Trimeric LpxA-like superfamily EP560_18510 IPR024688 Maltose/galactoside acetyltransferase EP560_18510 IPR039369 Galactoside O-acetyltransferase LacA-like EP560_18520 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase EP560_18520 IPR015424 Pyridoxal phosphate-dependent transferase EP560_18520 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP560_18520 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP560_18525 IPR011004 Trimeric LpxA-like superfamily EP560_18525 IPR001451 Hexapeptide repeat EP560_18530 IPR004104 Oxidoreductase, C-terminal EP560_18530 IPR036291 NAD(P)-binding domain superfamily EP560_18530 IPR000683 Oxidoreductase, N-terminal EP560_18535 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation EP560_18535 IPR036291 NAD(P)-binding domain superfamily EP560_18535 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal EP560_18535 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal EP560_18535 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase EP560_18535 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily EP560_18535 IPR017476 UDP-glucose/GDP-mannose dehydrogenase EP560_18535 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP560_18540 IPR003715 Polysaccharide export protein EP560_18540 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain EP560_18540 IPR019554 Soluble ligand binding domain EP560_18545 IPR036196 Phosphotyrosine protein phosphatase I superfamily EP560_18545 IPR023485 Phosphotyrosine protein phosphatase I EP560_18545 IPR017867 Protein-tyrosine phosphatase, low molecular weight EP560_18550 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_18550 IPR003856 Polysaccharide chain length determinant N-terminal domain EP560_18550 IPR032807 Tyrosine kinase, G-rich domain EP560_18550 IPR005702 Exopolysaccharide synthesis protein EP560_18550 IPR025669 AAA domain EP560_18555 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal EP560_18555 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain EP560_18555 IPR008104 Macrophage infectivity potentiator EP560_18555 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily EP560_18560 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily EP560_18560 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal EP560_18560 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain EP560_18560 IPR008104 Macrophage infectivity potentiator EP560_18565 IPR004268 Peptidoglycan biosynthesis protein MurJ EP560_18570 IPR002502 N-acetylmuramoyl-L-alanine amidase domain EP560_18570 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily EP560_18575 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily EP560_18575 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal EP560_18575 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD EP560_18575 IPR004393 Nicotinate-nucleotide pyrophosphorylase EP560_18575 IPR013785 Aldolase-type TIM barrel EP560_18575 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal EP560_18575 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal EP560_18585 IPR006311 Twin-arginine translocation pathway, signal sequence EP560_18585 IPR017850 Alkaline-phosphatase-like, core domain superfamily EP560_18585 IPR017767 Bacterial phospholipase C, phosphocholine-specific EP560_18585 IPR007312 Phosphoesterase EP560_18585 IPR008475 Bacterial phospholipase C, C-terminal domain EP560_18590 IPR001247 Exoribonuclease, phosphorolytic domain 1 EP560_18590 IPR018336 Ribonuclease PH, conserved site EP560_18590 IPR002381 Ribonuclease PH, bacterial-type EP560_18590 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_18590 IPR015847 Exoribonuclease, phosphorolytic domain 2 EP560_18590 IPR036345 Exoribonuclease, PH domain 2 superfamily EP560_18590 IPR027408 PNPase/RNase PH domain superfamily EP560_18595 IPR005804 Fatty acid desaturase domain EP560_18600 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP560_18600 IPR017938 Riboflavin synthase-like beta-barrel EP560_18600 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP560_18605 IPR023764 Transcriptional repressor HTH, FabR EP560_18605 IPR009057 Homeobox-like domain superfamily EP560_18605 IPR001647 DNA-binding HTH domain, TetR-type EP560_18610 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP560_18610 IPR013571 Transcription regulator QacR, C-terminal EP560_18610 IPR009057 Homeobox-like domain superfamily EP560_18610 IPR023772 DNA-binding HTH domain, TetR-type, conserved site EP560_18610 IPR001647 DNA-binding HTH domain, TetR-type EP560_18615 IPR036249 Thioredoxin-like superfamily EP560_18615 IPR001853 DSBA-like thioredoxin domain EP560_18615 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL EP560_18615 IPR017937 Thioredoxin, conserved site EP560_18615 IPR013766 Thioredoxin domain EP560_18620 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP560_18620 IPR010233 Ubiquinone biosynthesis O-methyltransferase EP560_18625 IPR041492 Haloacid dehalogenase-like hydrolase EP560_18625 IPR023214 HAD superfamily EP560_18625 IPR023198 Phosphoglycolate phosphatase-like, domain 2 EP560_18625 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic EP560_18625 IPR006439 HAD hydrolase, subfamily IA EP560_18625 IPR036412 HAD-like superfamily EP560_18630 IPR036291 NAD(P)-binding domain superfamily EP560_18630 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP560_18630 IPR002347 Short-chain dehydrogenase/reductase SDR EP560_18645 IPR033719 N-acetylglutamate synthase, kinase-like domain EP560_18645 IPR010167 Amino-acid N-acetyltransferase EP560_18645 IPR036393 Acetylglutamate kinase-like superfamily EP560_18645 IPR016181 Acyl-CoA N-acyltransferase EP560_18645 IPR001048 Aspartate/glutamate/uridylate kinase EP560_18645 IPR000182 GNAT domain EP560_18650 IPR015168 SsuA/THI5-like EP560_18650 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP560_18650 IPR010067 Aliphatic sulfonates-binding protein EP560_18655 IPR015168 SsuA/THI5-like EP560_18655 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP560_18655 IPR010067 Aliphatic sulfonates-binding protein EP560_18660 IPR036661 Luciferase-like domain superfamily EP560_18660 IPR011251 Luciferase-like domain EP560_18660 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent EP560_18665 IPR035906 MetI-like superfamily EP560_18665 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP560_18670 IPR003439 ABC transporter-like EP560_18670 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_18670 IPR003593 AAA+ ATPase domain EP560_18670 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB EP560_18675 IPR013573 Transcription regulator YcdC, C-terminal EP560_18675 IPR019915 Transcription regulator, pyrimidine utilisation, RutR EP560_18675 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP560_18675 IPR009057 Homeobox-like domain superfamily EP560_18675 IPR001647 DNA-binding HTH domain, TetR-type EP560_18680 IPR010049 MTA/SAH nucleosidase EP560_18680 IPR000845 Nucleoside phosphorylase domain EP560_18680 IPR035994 Nucleoside phosphorylase superfamily EP560_18690 IPR002606 Riboflavin kinase, bacterial EP560_18690 IPR023465 Riboflavin kinase domain superfamily EP560_18690 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_18690 IPR015864 FAD synthetase EP560_18690 IPR023468 Riboflavin kinase EP560_18690 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic EP560_18695 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding EP560_18695 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site EP560_18695 IPR002300 Aminoacyl-tRNA synthetase, class Ia EP560_18695 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain EP560_18695 IPR002301 Isoleucine-tRNA ligase EP560_18695 IPR023585 Isoleucine-tRNA ligase, type 1 EP560_18695 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP560_18695 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain EP560_18695 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding EP560_18695 IPR010663 Zinc finger, FPG/IleRS-type EP560_18700 IPR001872 Peptidase A8, signal peptidase II EP560_18705 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain EP560_18745 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site EP560_18745 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain EP560_18745 IPR029000 Cyclophilin-like domain superfamily EP560_18750 IPR029058 Alpha/Beta hydrolase fold EP560_18750 IPR013094 Alpha/beta hydrolase fold-3 EP560_18775 IPR009012 GrpE nucleotide exchange factor, head EP560_18775 IPR013805 GrpE nucleotide exchange factor, coiled-coil EP560_18775 IPR000740 GrpE nucleotide exchange factor EP560_18780 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily EP560_18780 IPR012725 Chaperone DnaK EP560_18780 IPR018181 Heat shock protein 70, conserved site EP560_18780 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily EP560_18780 IPR013126 Heat shock protein 70 family EP560_18800 IPR011757 Lytic transglycosylase MltB EP560_18800 IPR031304 Transglycosylase SLT domain 2 EP560_18800 IPR023346 Lysozyme-like domain superfamily EP560_18805 IPR011054 Rudiment single hybrid motif EP560_18805 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain EP560_18805 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit EP560_18805 IPR013815 ATP-grasp fold, subdomain 1 EP560_18805 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type EP560_18805 IPR011761 ATP-grasp fold EP560_18805 IPR016185 Pre-ATP-grasp domain superfamily EP560_18810 IPR000031 PurE domain EP560_18810 IPR035893 PurE domain superfamily EP560_18810 IPR033747 Class I PurE EP560_18810 IPR024694 PurE, prokaryotic type EP560_18825 IPR005757 Murein peptide ligase EP560_18825 IPR013221 Mur ligase, central EP560_18825 IPR000713 Mur ligase, N-terminal catalytic domain EP560_18825 IPR036615 Mur ligase, C-terminal domain superfamily EP560_18825 IPR004101 Mur ligase, C-terminal EP560_18825 IPR036565 Mur-like, catalytic domain superfamily EP560_18835 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily EP560_18835 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase EP560_18835 IPR033879 Undecaprenyl-diphosphatase EP560_18840 IPR022369 Integral membrane protein TerC, riboswitch-linked EP560_18840 IPR005496 Integral membrane protein TerC EP560_18850 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain EP560_18850 IPR016185 Pre-ATP-grasp domain superfamily EP560_18855 IPR017941 Rieske [2Fe-2S] iron-sulphur domain EP560_18855 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP560_18855 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site EP560_18860 IPR032466 Metal-dependent hydrolase EP560_18860 IPR014311 Guanine deaminase EP560_18860 IPR006680 Amidohydrolase-related EP560_18860 IPR011059 Metal-dependent hydrolase, composite domain superfamily EP560_18865 IPR005904 Hypoxanthine phosphoribosyl transferase EP560_18865 IPR029057 Phosphoribosyltransferase-like EP560_18865 IPR000836 Phosphoribosyltransferase domain EP560_18875 IPR017937 Thioredoxin, conserved site EP560_18875 IPR036249 Thioredoxin-like superfamily EP560_18875 IPR012336 Thioredoxin-like fold EP560_18875 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily EP560_18875 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal EP560_18875 IPR033954 Disulphide bond isomerase, DsbC/G EP560_18880 IPR002524 Cation efflux protein EP560_18880 IPR027469 Cation efflux transmembrane domain superfamily EP560_18880 IPR036837 Cation efflux protein, cytoplasmic domain superfamily EP560_18880 IPR027470 Cation efflux protein, cytoplasmic domain EP560_18885 IPR038390 Metal-sensitive transcriptional repressor superfamily EP560_18885 IPR003735 Metal-sensitive transcriptional repressor EP560_18890 IPR006073 GTP binding domain EP560_18890 IPR005225 Small GTP-binding protein domain EP560_18890 IPR027368 tRNA modification GTPase MnmE domain 2 EP560_18890 IPR025867 MnmE, helical domain EP560_18890 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_18890 IPR018948 GTP-binding protein TrmE, N-terminal EP560_18890 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 EP560_18890 IPR004520 tRNA modification GTPase MnmE EP560_18890 IPR031168 TrmE-type guanine nucleotide-binding domain EP560_18895 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 EP560_18895 IPR038221 YidC, periplasmic domain superfamily EP560_18895 IPR038210 Membrane insertase YidC, periplasmic domain EP560_18895 IPR028053 Membrane insertase YidC, N-terminal EP560_18895 IPR019998 Membrane insertase YidC EP560_18895 IPR028055 Membrane insertase YidC/Oxa1, C-terminal EP560_18900 IPR002696 Putative membrane protein insertion efficiency factor EP560_18905 IPR000100 Ribonuclease P EP560_18905 IPR020539 Ribonuclease P, conserved site EP560_18905 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP560_18905 IPR020568 Ribosomal protein S5 domain 2-type fold EP560_18910 IPR020939 Ribosomal protein L34, conserved site EP560_18910 IPR000271 Ribosomal protein L34 EP560_18935 IPR006171 TOPRIM domain EP560_18935 IPR013264 DNA primase, catalytic core, N-terminal EP560_18935 IPR034151 Bacterial DnaG primase, TOPRIM domain EP560_18935 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily EP560_18935 IPR019475 DNA primase, DnaB-helicase binding domain EP560_18935 IPR036977 DNA Primase, CHC2-type zinc finger EP560_18935 IPR030846 DNA primase DnaG, bacteria EP560_18935 IPR002694 Zinc finger, CHC2-type EP560_18935 IPR006295 DNA primase, DnaG EP560_18975 IPR008144 Guanylate kinase-like domain EP560_18975 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_18975 IPR008145 Guanylate kinase/L-type calcium channel beta subunit EP560_18975 IPR017665 Guanylate kinase EP560_18975 IPR020590 Guanylate kinase, conserved site EP560_19000 IPR011010 DNA breaking-rejoining enzyme, catalytic core EP560_19000 IPR002104 Integrase, catalytic domain EP560_19000 IPR004107 Integrase, SAM-like, N-terminal EP560_19000 IPR010998 Integrase/recombinase, N-terminal EP560_19000 IPR013762 Integrase-like, catalytic domain superfamily EP560_19000 IPR023009 Tyrosine recombinase XerC/XerD EP560_19035 IPR040982 DNA polymerase III alpha subunit finger domain EP560_19035 IPR004013 PHP domain EP560_19035 IPR029460 DNA polymerase, helix-hairpin-helix motif EP560_19035 IPR036895 Uracil-DNA glycosylase-like domain superfamily EP560_19035 IPR003141 Polymerase/histidinol phosphatase, N-terminal EP560_19035 IPR004805 DNA polymerase III, alpha subunit EP560_19035 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain EP560_19055 IPR023400 DNA recombination and repair protein RecA, C-terminal EP560_19055 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain EP560_19055 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_19055 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface EP560_19055 IPR020584 DNA recombination/repair protein RecA, conserved site EP560_19055 IPR013765 DNA recombination and repair protein RecA EP560_19055 IPR003593 AAA+ ATPase domain EP560_19100 IPR038729 Rad50/SbcC-type AAA domain EP560_19100 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_19125 IPR005144 ATP-cone domain EP560_19125 IPR013346 Ribonucleotide reductase, class I , alpha subunit EP560_19125 IPR000788 Ribonucleotide reductase large subunit, C-terminal EP560_19125 IPR013509 Ribonucleotide reductase large subunit, N-terminal EP560_19125 IPR039718 Ribonucleoside-diphosphate reductase large subunit EP560_19125 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal EP560_19130 IPR012348 Ribonucleotide reductase-like EP560_19130 IPR033909 Ribonucleotide reductase small subunit EP560_19130 IPR000358 Ribonucleotide reductase small subunit family EP560_19130 IPR030475 Ribonucleotide reductase small subunit, acitve site EP560_19130 IPR009078 Ferritin-like superfamily EP560_19155 IPR036157 dUTPase-like superfamily EP560_19155 IPR033704 dUTPase, trimeric EP560_19155 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase EP560_19155 IPR029054 dUTPase-like EP560_19255 IPR006309 DNA polymerase 3, epsilon subunit EP560_19255 IPR036397 Ribonuclease H superfamily EP560_19255 IPR012337 Ribonuclease H-like superfamily EP560_19255 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain EP560_19255 IPR013520 Exonuclease, RNase T/DNA polymerase III EP560_19400 IPR036086 ParB/Sulfiredoxin superfamily EP560_19400 IPR003115 ParB/Sulfiredoxin EP560_19405 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_19405 IPR018449 NIL domain EP560_19405 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain EP560_19405 IPR017871 ABC transporter, conserved site EP560_19405 IPR003439 ABC transporter-like EP560_19405 IPR026253 Methionine import ATP-binding protein MetN EP560_19405 IPR003593 AAA+ ATPase domain EP560_19405 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal EP560_19515 IPR000064 Endopeptidase, NLPC/P60 domain EP560_19515 IPR038765 Papain-like cysteine peptidase superfamily EP560_19595 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold EP560_19595 IPR002071 Thermonuclease active site EP560_19595 IPR035437 SNase-like, OB-fold superfamily EP560_19605 IPR001460 Penicillin-binding protein, transpeptidase EP560_19605 IPR012338 Beta-lactamase/transpeptidase-like EP560_19615 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily EP560_19615 IPR027444 Histone-like protein H-NS, C-terminal domain EP560_19615 IPR001801 Histone-like protein H-NS EP560_19670 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_19670 IPR025669 AAA domain EP560_19675 IPR004437 ParB/RepB/Spo0J partition protein EP560_19675 IPR003115 ParB/Sulfiredoxin EP560_19675 IPR036086 ParB/Sulfiredoxin superfamily EP560_19675 IPR041468 ParB/Spo0J, HTH domain EP560_19695 IPR008863 Toxic anion resistance EP560_19800 IPR012724 Chaperone DnaJ EP560_19800 IPR002939 Chaperone DnaJ, C-terminal EP560_19800 IPR036869 Chaperone J-domain superfamily EP560_19800 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily EP560_19800 IPR001305 Heat shock protein DnaJ, cysteine-rich domain EP560_19800 IPR008971 HSP40/DnaJ peptide-binding EP560_19800 IPR001623 DnaJ domain EP560_19800 IPR018253 DnaJ domain, conserved site EP560_19835 IPR040668 TraI, 2B/2B-like domain EP560_19835 IPR009767 DNA helicase, TraI type EP560_19835 IPR014129 Conjugative transfer relaxase protein TraI EP560_19835 IPR014059 Conjugative relaxase, N-terminal EP560_19835 IPR040987 TraI, N-terminal subdomain EP560_19835 IPR014862 TrwC relaxase EP560_19835 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP560_19870 IPR001598 Transposase, IS30, conserved site EP560_19870 IPR012337 Ribonuclease H-like superfamily EP560_19870 IPR025246 Transposase IS30-like HTH domain EP560_19870 IPR001584 Integrase, catalytic core EP560_19870 IPR036397 Ribonuclease H superfamily EP560_19875 IPR011009 Protein kinase-like domain superfamily EP560_19875 IPR024165 Aminoglycoside 3-phosphotransferase EP560_19875 IPR002575 Aminoglycoside phosphotransferase EP560_19880 IPR001598 Transposase, IS30, conserved site EP560_19880 IPR036397 Ribonuclease H superfamily EP560_19880 IPR012337 Ribonuclease H-like superfamily EP560_19880 IPR025246 Transposase IS30-like HTH domain EP560_19880 IPR001584 Integrase, catalytic core EP560_19895 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily EP560_19895 IPR006120 Resolvase, HTH domain EP560_19895 IPR006118 Recombinase, conserved site EP560_19895 IPR006119 Resolvase, N-terminal catalytic domain EP560_19910 IPR023346 Lysozyme-like domain superfamily EP560_19910 IPR008258 Transglycosylase SLT domain 1 EP560_19945 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal EP560_19945 IPR033954 Disulphide bond isomerase, DsbC/G EP560_19945 IPR012336 Thioredoxin-like fold EP560_19945 IPR036249 Thioredoxin-like superfamily EP560_19945 IPR017937 Thioredoxin, conserved site EP560_19980 IPR009649 TraU EP560_19990 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN EP560_20005 IPR010927 Type IV conjugative transfer system protein TraH EP560_20025 IPR036775 DNA polymerase, Y-family, little finger domain superfamily EP560_20025 IPR001126 UmuC domain EP560_20025 IPR024728 DNA polymerase type-Y, HhH motif EP560_20025 IPR017961 DNA polymerase, Y-family, little finger domain EP560_20025 IPR025188 Domain of unknown function DUF4113 EP560_20045 IPR000525 Initiator Rep protein EP560_20045 IPR036388 Winged helix-like DNA-binding domain superfamily EP560_20045 IPR036390 Winged helix DNA-binding domain superfamily EP560_20070 IPR000531 TonB-dependent receptor-like, beta-barrel EP560_20070 IPR037066 TonB-dependent receptor, plug domain superfamily EP560_20070 IPR039426 Vitamin B12 transporter BtuB-like EP560_20070 IPR012910 TonB-dependent receptor, plug domain EP560_20080 IPR001584 Integrase, catalytic core EP560_20080 IPR025246 Transposase IS30-like HTH domain EP560_20080 IPR012337 Ribonuclease H-like superfamily EP560_20080 IPR036397 Ribonuclease H superfamily EP560_20080 IPR001598 Transposase, IS30, conserved site