locus-tag class description EP550_00005 IPR013317 Chromosomal replication initiator protein DnaA EP550_00005 IPR020591 Chromosomal replication control, initiator DnaA-like EP550_00005 IPR001957 Chromosomal replication control, initiator DnaA EP550_00005 IPR003593 AAA+ ATPase domain EP550_00005 IPR010921 Trp repressor/replication initiator EP550_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal EP550_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site EP550_00005 IPR038454 DnaA, N-terminal domain superfamily EP550_00005 IPR024633 DnaA N-terminal domain EP550_00010 IPR022637 DNA polymerase III, beta sliding clamp, central EP550_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal EP550_00010 IPR001001 DNA polymerase III, beta sliding clamp EP550_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal EP550_00015 IPR042174 DNA-binding RecF, domain 2 EP550_00015 IPR003395 RecF/RecN/SMC, N-terminal EP550_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_00015 IPR001238 DNA-binding, RecF EP550_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain EP550_00020 IPR041423 DNA gyrase subunit B insert domain EP550_00020 IPR006171 TOPRIM domain EP550_00020 IPR018522 DNA topoisomerase, type IIA, conserved site EP550_00020 IPR011557 DNA gyrase, subunit B EP550_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal EP550_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily EP550_00020 IPR001241 DNA topoisomerase, type IIA EP550_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP550_00020 IPR002288 DNA gyrase B subunit, C-terminal EP550_00020 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_00020 IPR003594 Histidine kinase/HSP90-like ATPase EP550_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 EP550_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_00030 IPR032816 SNARE associated Golgi protein EP550_00030 IPR032818 DedA family EP550_00035 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_00035 IPR003593 AAA+ ATPase domain EP550_00035 IPR032781 ABC-transporter extension domain EP550_00035 IPR003439 ABC transporter-like EP550_00035 IPR017871 ABC transporter, conserved site EP550_00040 IPR038404 TRAP transporter solute receptor DctP superfamily EP550_00045 IPR038404 TRAP transporter solute receptor DctP superfamily EP550_00050 IPR038404 TRAP transporter solute receptor DctP superfamily EP550_00055 IPR000361 FeS cluster biogenesis EP550_00055 IPR016092 FeS cluster insertion protein EP550_00055 IPR017870 FeS cluster insertion, C-terminal, conserved site EP550_00055 IPR023063 FeS cluster insertion protein ErpA EP550_00055 IPR035903 HesB-like domain superfamily EP550_00060 IPR000639 Epoxide hydrolase-like EP550_00060 IPR029058 Alpha/Beta hydrolase fold EP550_00060 IPR000073 Alpha/beta hydrolase fold-1 EP550_00065 IPR005338 Anhydro-N-acetylmuramic acid kinase EP550_00070 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 EP550_00070 IPR002307 Tyrosine-tRNA ligase EP550_00070 IPR024088 Tyrosine-tRNA ligase, bacterial-type EP550_00070 IPR036986 RNA-binding S4 domain superfamily EP550_00070 IPR002942 RNA-binding S4 domain EP550_00070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_00070 IPR002305 Aminoacyl-tRNA synthetase, class Ic EP550_00070 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site EP550_00115 IPR037272 Sodium:neurotransmitter symporter superfamily EP550_00115 IPR000175 Sodium:neurotransmitter symporter EP550_00125 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site EP550_00125 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type EP550_00125 IPR035926 NusB-like superfamily EP550_00125 IPR006027 NusB/RsmB/TIM44 EP550_00125 IPR023267 RNA (C5-cytosine) methyltransferase EP550_00125 IPR004573 rRNA small subunit methyltransferase B EP550_00125 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_00130 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain EP550_00130 IPR011034 Formyl transferase-like, C-terminal domain superfamily EP550_00130 IPR036477 Formyl transferase, N-terminal domain superfamily EP550_00130 IPR005794 Methionyl-tRNA formyltransferase EP550_00130 IPR005793 Formyl transferase, C-terminal EP550_00130 IPR037022 Formyl transferase, C-terminal domain superfamily EP550_00130 IPR002376 Formyl transferase, N-terminal EP550_00135 IPR037237 IlvD/EDD, N-terminal domain EP550_00135 IPR042096 Dihydroxy-acid dehydratase, C-terminal EP550_00135 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site EP550_00135 IPR004404 Dihydroxy-acid dehydratase EP550_00135 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase EP550_00150 IPR005119 LysR, substrate-binding EP550_00150 IPR036390 Winged helix DNA-binding domain superfamily EP550_00150 IPR000847 Transcription regulator HTH, LysR EP550_00150 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_00155 IPR019918 Pyrimidine permease RutG, predicted EP550_00155 IPR006042 Xanthine/uracil permease EP550_00155 IPR006043 Xanthine/uracil/vitamin C permease EP550_00160 IPR033129 Phosphoenolpyruvate carboxylase, His active site EP550_00160 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site EP550_00160 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily EP550_00160 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type EP550_00160 IPR021135 Phosphoenolpyruvate carboxylase EP550_00165 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP550_00165 IPR013572 Transcription regulator MAATS, C-terminal EP550_00165 IPR001647 DNA-binding HTH domain, TetR-type EP550_00165 IPR023772 DNA-binding HTH domain, TetR-type, conserved site EP550_00165 IPR009057 Homeobox-like domain superfamily EP550_00170 IPR006143 RND efflux pump, membrane fusion protein EP550_00170 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain EP550_00170 IPR030190 Macrolide export protein MacA EP550_00175 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains EP550_00175 IPR001036 Acriflavin resistance protein EP550_00185 IPR001623 DnaJ domain EP550_00185 IPR002939 Chaperone DnaJ, C-terminal EP550_00185 IPR012724 Chaperone DnaJ EP550_00185 IPR008971 HSP40/DnaJ peptide-binding EP550_00185 IPR001305 Heat shock protein DnaJ, cysteine-rich domain EP550_00185 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily EP550_00185 IPR036869 Chaperone J-domain superfamily EP550_00185 IPR018253 DnaJ domain, conserved site EP550_00195 IPR022663 Dihydrodipicolinate reductase, C-terminal EP550_00195 IPR036291 NAD(P)-binding domain superfamily EP550_00195 IPR000846 Dihydrodipicolinate reductase, N-terminal EP550_00195 IPR022664 Dihydrodipicolinate reductase, conserved site EP550_00195 IPR023940 Dihydrodipicolinate reductase EP550_00205 IPR036259 MFS transporter superfamily EP550_00205 IPR020846 Major facilitator superfamily domain EP550_00205 IPR011701 Major facilitator superfamily EP550_00210 IPR036812 NADP-dependent oxidoreductase domain superfamily EP550_00210 IPR023210 NADP-dependent oxidoreductase domain EP550_00210 IPR020471 Aldo/keto reductase EP550_00210 IPR018170 Aldo/keto reductase, conserved site EP550_00215 IPR036390 Winged helix DNA-binding domain superfamily EP550_00215 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_00215 IPR000847 Transcription regulator HTH, LysR EP550_00215 IPR005119 LysR, substrate-binding EP550_00230 IPR004839 Aminotransferase, class I/classII EP550_00230 IPR015424 Pyridoxal phosphate-dependent transferase EP550_00230 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_00230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_00230 IPR000524 Transcription regulator HTH, GntR EP550_00230 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_00230 IPR036390 Winged helix DNA-binding domain superfamily EP550_00235 IPR013154 Alcohol dehydrogenase, N-terminal EP550_00235 IPR020843 Polyketide synthase, enoylreductase domain EP550_00235 IPR036291 NAD(P)-binding domain superfamily EP550_00235 IPR011032 GroES-like superfamily EP550_00235 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 EP550_00235 IPR013149 Alcohol dehydrogenase, C-terminal EP550_00235 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site EP550_00240 IPR005019 Methyladenine glycosylase EP550_00240 IPR011257 DNA glycosylase EP550_00240 IPR004597 DNA-3-methyladenine glycosylase I EP550_00255 IPR011257 DNA glycosylase EP550_00255 IPR005760 A/G-specific adenine glycosylase MutY EP550_00255 IPR003265 HhH-GPD domain EP550_00255 IPR029119 MutY, C-terminal EP550_00255 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal EP550_00255 IPR000445 Helix-hairpin-helix motif EP550_00255 IPR015797 NUDIX hydrolase-like domain superfamily EP550_00255 IPR004035 Endonuclease III, iron-sulphur binding site EP550_00255 IPR004036 Endonuclease III-like, conserved site-2 EP550_00255 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif EP550_00265 IPR003140 Phospholipase/carboxylesterase/thioesterase EP550_00265 IPR029058 Alpha/Beta hydrolase fold EP550_00270 IPR009760 Protein of unknown function DUF1328 EP550_00275 IPR008228 Uncharacterised conserved protein UCP006173 EP550_00275 IPR005358 Putative zinc- or iron-chelating domain containing protein EP550_00280 IPR012938 Glucose/Sorbosone dehydrogenase EP550_00280 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase EP550_00280 IPR011042 Six-bladed beta-propeller, TolB-like EP550_00285 IPR032423 AAA C-terminal domain EP550_00285 IPR003959 ATPase, AAA-type, core EP550_00285 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal EP550_00285 IPR021886 MgsA AAA+ ATPase C-terminal EP550_00285 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_00285 IPR003593 AAA+ ATPase domain EP550_00290 IPR000292 Formate/nitrite transporter EP550_00290 IPR023271 Aquaporin-like EP550_00305 IPR028923 SAICAR synthetase/ADE2, N-terminal EP550_00305 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase EP550_00305 IPR018236 SAICAR synthetase, conserved site EP550_00305 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase EP550_00315 IPR013785 Aldolase-type TIM barrel EP550_00315 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA EP550_00315 IPR002220 DapA-like EP550_00315 IPR020625 Schiff base-forming aldolase, active site EP550_00315 IPR020624 Schiff base-forming aldolase, conserved site EP550_00320 IPR000868 Isochorismatase-like EP550_00320 IPR036380 Isochorismatase-like superfamily EP550_00325 IPR038770 Sodium/solute symporter superfamily EP550_00325 IPR004710 Bile acid:sodium symporter EP550_00325 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 EP550_00330 IPR002528 Multi antimicrobial extrusion protein EP550_00335 IPR007553 Domain of unknown function DUF523 EP550_00340 IPR005956 4-hydroxyphenylpyruvate dioxygenase EP550_00340 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal EP550_00340 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase EP550_00340 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain EP550_00340 IPR037523 Vicinal oxygen chelate (VOC) domain EP550_00340 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal EP550_00350 IPR037523 Vicinal oxygen chelate (VOC) domain EP550_00350 IPR022858 Metallothiol transferase FosB EP550_00350 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain EP550_00350 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase EP550_00355 IPR034333 Glutathione S-transferases, class Zeta , N-terminal EP550_00355 IPR036249 Thioredoxin-like superfamily EP550_00355 IPR005955 Glutathione S-transferases, class Zeta EP550_00355 IPR004046 Glutathione S-transferase, C-terminal EP550_00355 IPR004045 Glutathione S-transferase, N-terminal EP550_00355 IPR040079 Glutathione Transferase family EP550_00355 IPR036282 Glutathione S-transferase, C-terminal domain superfamily EP550_00355 IPR034330 Glutathione S-transferases, class Zeta , C-terminal EP550_00355 IPR010987 Glutathione S-transferase, C-terminal-like EP550_00365 IPR004841 Amino acid permease/ SLC12A domain EP550_00365 IPR004840 Amino acid permease, conserved site EP550_00375 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_00375 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal EP550_00375 IPR003495 CobW/HypB/UreG, nucleotide-binding domain EP550_00385 IPR010248 Histidine utilization repressor EP550_00385 IPR011663 UbiC transcription regulator-associated EP550_00385 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_00385 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily EP550_00385 IPR036390 Winged helix DNA-binding domain superfamily EP550_00385 IPR000524 Transcription regulator HTH, GntR EP550_00390 IPR010282 Uncharacterised protein family HutD/Ves EP550_00390 IPR011051 RmlC-like cupin domain superfamily EP550_00390 IPR014710 RmlC-like jelly roll fold EP550_00395 IPR023636 Urocanase conserved site EP550_00395 IPR023637 Urocanase EP550_00395 IPR035401 Urocanase, C-terminal domain EP550_00395 IPR038364 Urocanase, central domain superfamily EP550_00395 IPR035400 Urocanase, N-terminal domain EP550_00395 IPR035085 Urocanase, Rossmann-like domain EP550_00395 IPR036190 Urocanase superfamily EP550_00400 IPR022313 Phenylalanine/histidine ammonia-lyases, active site EP550_00400 IPR008948 L-Aspartase-like EP550_00400 IPR024083 Fumarase/histidase, N-terminal EP550_00400 IPR005921 Histidine ammonia-lyase EP550_00400 IPR001106 Aromatic amino acid lyase EP550_00405 IPR004840 Amino acid permease, conserved site EP550_00405 IPR004841 Amino acid permease/ SLC12A domain EP550_00410 IPR032466 Metal-dependent hydrolase EP550_00410 IPR006680 Amidohydrolase-related EP550_00410 IPR005920 Imidazolonepropionase EP550_00410 IPR011059 Metal-dependent hydrolase, composite domain superfamily EP550_00415 IPR020855 Ureohydrolase, manganese-binding site EP550_00415 IPR023696 Ureohydrolase domain superfamily EP550_00415 IPR006035 Ureohydrolase EP550_00415 IPR005923 Formiminoglutamase EP550_00430 IPR015942 Asp/Glu/hydantoin racemase EP550_00430 IPR001920 Asp/Glu racemase EP550_00430 IPR033134 Asp/Glu racemase, active site 2 EP550_00430 IPR018187 Asp/Glu racemase, active site 1 EP550_00430 IPR004391 Glutamate racemase EP550_00440 IPR012263 Adenine modification methylase, M.EcoRV-type EP550_00440 IPR023095 Adenine-specific methyltransferase, domain 2 EP550_00440 IPR002052 DNA methylase, N-6 adenine-specific, conserved site EP550_00440 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_00440 IPR012327 D12 class N6 adenine-specific DNA methyltransferase EP550_00455 IPR009492 TniQ EP550_00455 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl EP550_00460 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_00460 IPR003593 AAA+ ATPase domain EP550_00460 IPR021542 Tn7 transposition regulator TnsC EP550_00465 IPR001584 Integrase, catalytic core EP550_00465 IPR012337 Ribonuclease H-like superfamily EP550_00465 IPR036397 Ribonuclease H superfamily EP550_00470 IPR036390 Winged helix DNA-binding domain superfamily EP550_00470 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_00470 IPR011856 tRNA endonuclease-like domain superfamily EP550_00470 IPR014832 TnsA endonuclease C-terminal EP550_00470 IPR014833 TnsA endonuclease, N-terminal EP550_00470 IPR011335 Restriction endonuclease type II-like EP550_00475 IPR035466 GlmS/AgaS, SIS domain 1 EP550_00475 IPR035490 GlmS/FrlB, SIS domain 2 EP550_00475 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising EP550_00475 IPR029055 Nucleophile aminohydrolases, N-terminal EP550_00475 IPR001347 Sugar isomerase (SIS) EP550_00475 IPR017932 Glutamine amidotransferase type 2 domain EP550_00480 IPR038009 GlmU, C-terminal LbH domain EP550_00480 IPR001451 Hexapeptide repeat EP550_00480 IPR029044 Nucleotide-diphospho-sugar transferases EP550_00480 IPR025877 MobA-like NTP transferase EP550_00480 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase EP550_00480 IPR018357 Hexapeptide transferase, conserved site EP550_00480 IPR011004 Trimeric LpxA-like superfamily EP550_00485 IPR026037 Phosphatidylglycerophosphatase A EP550_00485 IPR036681 PgpA-like superfamily EP550_00485 IPR007686 YutG/PgpA domain EP550_00490 IPR036676 PurM-like, C-terminal domain superfamily EP550_00490 IPR006283 Thiamine-monophosphate kinase EP550_00490 IPR016188 PurM-like, N-terminal domain EP550_00490 IPR036921 PurM-like, N-terminal domain superfamily EP550_00490 IPR010918 PurM-like, C-terminal domain EP550_00495 IPR006027 NusB/RsmB/TIM44 EP550_00495 IPR011605 NusB antitermination factor EP550_00495 IPR035926 NusB-like superfamily EP550_00500 IPR034964 Lumazine synthase EP550_00500 IPR036467 Lumazine/riboflavin synthase superfamily EP550_00500 IPR002180 Lumazine/riboflavin synthase EP550_00505 IPR032677 GTP cyclohydrolase II EP550_00505 IPR036144 RibA-like superfamily EP550_00505 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB EP550_00505 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily EP550_00515 IPR036412 HAD-like superfamily EP550_00515 IPR023214 HAD superfamily EP550_00515 IPR023190 Phosphoserine phosphatase, domain 2 EP550_00515 IPR002912 ACT domain EP550_00535 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily EP550_00535 IPR003732 D-aminoacyl-tRNA deacylase DTD EP550_00540 IPR010582 Catalase immune-responsive domain EP550_00540 IPR018028 Catalase, mono-functional, haem-containing EP550_00540 IPR020835 Catalase superfamily EP550_00540 IPR011614 Catalase core domain EP550_00540 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 EP550_00540 IPR024708 Catalase active site EP550_00540 IPR037060 Catalase core domain superfamily EP550_00540 IPR002226 Catalase haem-binding site EP550_00550 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain EP550_00550 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase EP550_00550 IPR006406 Nicotinate phosphoribosyltransferase EP550_00550 IPR007229 Nicotinate phosphoribosyltransferase family EP550_00550 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal EP550_00555 IPR036873 Rhodanese-like domain superfamily EP550_00555 IPR001763 Rhodanese-like domain EP550_00555 IPR001307 Thiosulphate sulfurtransferase, conserved site EP550_00560 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 EP550_00560 IPR033177 Phosphatidylserine decarboxylase EP550_00560 IPR003817 Phosphatidylserine decarboxylase-related EP550_00565 IPR025668 Transposase DDE domain EP550_00570 IPR004304 Acetamidase/Formamidase EP550_00575 IPR026045 Ferric binding protein EP550_00575 IPR006061 Solute-binding family 1, conserved site EP550_00575 IPR006059 Bacterial extracellular solute-binding protein EP550_00585 IPR000014 PAS domain EP550_00585 IPR035965 PAS domain superfamily EP550_00585 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP550_00585 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP550_00585 IPR005467 Histidine kinase domain EP550_00585 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_00585 IPR003594 Histidine kinase/HSP90-like ATPase EP550_00585 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP550_00585 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR EP550_00585 IPR021766 Phosphate regulon sensor protein PhoR EP550_00585 IPR013767 PAS fold EP550_00590 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_00590 IPR001789 Signal transduction response regulator, receiver domain EP550_00590 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB EP550_00590 IPR016032 Signal transduction response regulator, C-terminal effector EP550_00590 IPR001867 OmpR/PhoB-type DNA-binding domain EP550_00590 IPR039420 Transcriptional regulatory protein WalR-like EP550_00590 IPR011006 CheY-like superfamily EP550_00600 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_00600 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_00600 IPR036291 NAD(P)-binding domain superfamily EP550_00605 IPR002528 Multi antimicrobial extrusion protein EP550_00610 IPR004839 Aminotransferase, class I/classII EP550_00610 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_00610 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_00610 IPR015424 Pyridoxal phosphate-dependent transferase EP550_00615 IPR007383 Protein of unknown function DUF445 EP550_00630 IPR006334 Glutamate--cysteine ligase, monofunctional EP550_00630 IPR007370 Glutamate--cysteine ligase EP550_00630 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain EP550_00635 IPR003752 Disulphide bond formation protein DsbB/BdbC EP550_00635 IPR022920 Disulphide bond formation protein DsbB EP550_00635 IPR023380 DsbB-like superfamily EP550_00640 IPR006531 Gp5 N-terminal EP550_00640 IPR037026 Vgr protein, OB-fold domain superfamily EP550_00640 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein EP550_00640 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset EP550_00650 IPR019948 Gram-positive LPXTG cell wall anchor EP550_00650 IPR009063 Immunoglobulin/albumin-binding domain superfamily EP550_00650 IPR019931 LPXTG cell wall anchor domain EP550_00650 IPR018392 LysM domain EP550_00650 IPR005038 Octapeptide repeat EP550_00650 IPR003132 Protein A, Ig-binding domain EP550_00650 IPR036779 LysM domain superfamily EP550_00650 IPR005877 YSIRK Gram-positive signal peptide EP550_00660 IPR004291 Transposase, IS66 EP550_00660 IPR024474 Zinc-finger binding domain of transposase IS66 EP550_00660 IPR039552 Transposase IS66, C-terminal EP550_00660 IPR024463 Transposase TnpC, homeodomain EP550_00680 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA EP550_00680 IPR029058 Alpha/Beta hydrolase fold EP550_00685 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal EP550_00685 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_00685 IPR018522 DNA topoisomerase, type IIA, conserved site EP550_00685 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative EP550_00685 IPR006171 TOPRIM domain EP550_00685 IPR013760 DNA topoisomerase, type IIA-like domain superfamily EP550_00685 IPR001241 DNA topoisomerase, type IIA EP550_00685 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP550_00685 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_00685 IPR002288 DNA gyrase B subunit, C-terminal EP550_00685 IPR003594 Histidine kinase/HSP90-like ATPase EP550_00685 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 EP550_00690 IPR036291 NAD(P)-binding domain superfamily EP550_00690 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_00695 IPR023525 Ureidoglycolate lyase, bacterial EP550_00695 IPR011051 RmlC-like cupin domain superfamily EP550_00695 IPR024060 Ureidoglycolate lyase domain superfamily EP550_00695 IPR007247 Ureidoglycolate lyase EP550_00700 IPR008979 Galactose-binding-like domain superfamily EP550_00700 IPR015908 Allantoicase domain EP550_00700 IPR005164 Allantoicase EP550_00705 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_00705 IPR002938 FAD-binding domain EP550_00715 IPR006043 Xanthine/uracil/vitamin C permease EP550_00715 IPR006042 Xanthine/uracil permease EP550_00715 IPR017588 Uric acid permease UacT-like EP550_00720 IPR023419 Transthyretin, conserved site EP550_00720 IPR014306 Hydroxyisourate hydrolase EP550_00720 IPR023418 Transthyretin, thyroxine binding site EP550_00720 IPR023416 Transthyretin/hydroxyisourate hydrolase domain EP550_00720 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily EP550_00750 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain EP550_00750 IPR003834 Cytochrome C biogenesis protein, transmembrane domain EP550_00750 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily EP550_00750 IPR022910 Thiol:disulphide interchange protein DsbD EP550_00750 IPR036249 Thioredoxin-like superfamily EP550_00750 IPR017937 Thioredoxin, conserved site EP550_00750 IPR035671 DsbD gamma EP550_00750 IPR013766 Thioredoxin domain EP550_00755 IPR000160 GGDEF domain EP550_00755 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region EP550_00755 IPR029787 Nucleotide cyclase EP550_00760 IPR029058 Alpha/Beta hydrolase fold EP550_00760 IPR013094 Alpha/beta hydrolase fold-3 EP550_00760 IPR002168 Lipase, GDXG, putative histidine active site EP550_00760 IPR033140 Lipase, GDXG, putative serine active site EP550_00770 IPR006660 Arsenate reductase-like EP550_00770 IPR036249 Thioredoxin-like superfamily EP550_00770 IPR006504 Transcriptional regulator Spx/MgsR EP550_00775 IPR036691 Endonuclease/exonuclease/phosphatase superfamily EP550_00775 IPR005135 Endonuclease/exonuclease/phosphatase EP550_00775 IPR020847 AP endonuclease 1, binding site EP550_00775 IPR004808 AP endonuclease 1 EP550_00775 IPR020848 AP endonuclease 1, conserved site EP550_00780 IPR000836 Phosphoribosyltransferase domain EP550_00780 IPR023031 Orotate phosphoribosyltransferase EP550_00780 IPR004467 Orotate phosphoribosyl transferase domain EP550_00780 IPR029057 Phosphoribosyltransferase-like EP550_00795 IPR013815 ATP-grasp fold, subdomain 1 EP550_00795 IPR011761 ATP-grasp fold EP550_00795 IPR004215 Prokaryotic glutathione synthetase, N-terminal EP550_00795 IPR004218 Prokaryotic glutathione synthetase, ATP-binding EP550_00795 IPR016185 Pre-ATP-grasp domain superfamily EP550_00795 IPR006284 Glutathione synthetase, prokaryotic EP550_00800 IPR004276 Glycosyltransferase family 28, N-terminal domain EP550_00800 IPR006009 N-acetylglucosaminyltransferase, MurG EP550_00800 IPR007235 Glycosyl transferase, family 28, C-terminal EP550_00805 IPR013221 Mur ligase, central EP550_00805 IPR000713 Mur ligase, N-terminal catalytic domain EP550_00805 IPR005758 UDP-N-acetylmuramate--L-alanine ligase EP550_00805 IPR036615 Mur ligase, C-terminal domain superfamily EP550_00805 IPR036565 Mur-like, catalytic domain superfamily EP550_00805 IPR004101 Mur ligase, C-terminal EP550_00810 IPR011127 D-alanine--D-alanine ligase, N-terminal domain EP550_00810 IPR016185 Pre-ATP-grasp domain superfamily EP550_00810 IPR005905 D-alanine--D-alanine ligase EP550_00810 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site EP550_00810 IPR013815 ATP-grasp fold, subdomain 1 EP550_00810 IPR011761 ATP-grasp fold EP550_00810 IPR011095 D-alanine--D-alanine ligase, C-terminal EP550_00815 IPR026579 Cell division protein FtsQ EP550_00815 IPR034746 POTRA domain EP550_00815 IPR013685 POTRA domain, FtsQ-type EP550_00815 IPR005548 Cell division protein FtsQ/DivIB EP550_00820 IPR020823 Cell division protein FtsA EP550_00820 IPR003494 SHS2 domain inserted in FtsA EP550_00825 IPR000158 Cell division protein FtsZ EP550_00825 IPR036525 Tubulin/FtsZ, GTPase domain superfamily EP550_00825 IPR003008 Tubulin/FtsZ, GTPase domain EP550_00825 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain EP550_00825 IPR020805 Cell division protein FtsZ, conserved site EP550_00825 IPR024757 Cell division protein FtsZ, C-terminal EP550_00825 IPR008280 Tubulin/FtsZ, C-terminal EP550_00830 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal EP550_00830 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal EP550_00830 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase EP550_00830 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_00840 IPR016047 Peptidase M23 EP550_00840 IPR011055 Duplicated hybrid motif EP550_00845 IPR029061 Thiamin diphosphate-binding fold EP550_00845 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II EP550_00845 IPR041621 Pyruvate dehydrogenase E1 component, middle domain EP550_00845 IPR005474 Transketolase, N-terminal EP550_00845 IPR004660 Pyruvate dehydrogenase E1 component EP550_00845 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal EP550_00850 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site EP550_00850 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex EP550_00850 IPR000089 Biotin/lipoyl attachment EP550_00850 IPR004167 Peripheral subunit-binding domain EP550_00850 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily EP550_00850 IPR036625 E3-binding domain superfamily EP550_00850 IPR011053 Single hybrid motif EP550_00850 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain EP550_00860 IPR001727 Gdt1 family EP550_00865 IPR010105 TonB-dependent siderophore receptor EP550_00865 IPR010917 TonB-dependent receptor, conserved site EP550_00865 IPR012910 TonB-dependent receptor, plug domain EP550_00865 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_00865 IPR039423 TonB-dependent receptor-like EP550_00865 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_00865 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP550_00865 IPR010916 TonB box, conserved site EP550_00870 IPR029039 Flavoprotein-like superfamily EP550_00870 IPR001279 Metallo-beta-lactamase EP550_00870 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP550_00870 IPR012349 FMN-binding split barrel EP550_00870 IPR008254 Flavodoxin/nitric oxide synthase EP550_00870 IPR001226 Flavodoxin, conserved site EP550_00870 IPR002563 Flavin reductase like domain EP550_00875 IPR005358 Putative zinc- or iron-chelating domain containing protein EP550_00880 IPR005990 Inosine-5'-monophosphate dehydrogenase EP550_00880 IPR015875 IMP dehydrogenase / GMP reductase, conserved site EP550_00880 IPR000644 CBS domain EP550_00880 IPR013785 Aldolase-type TIM barrel EP550_00880 IPR001093 IMP dehydrogenase/GMP reductase EP550_00885 IPR016066 Alpha-D-phosphohexomutase, conserved site EP550_00885 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I EP550_00885 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III EP550_00885 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II EP550_00885 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III EP550_00885 IPR005843 Alpha-D-phosphohexomutase, C-terminal EP550_00885 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily EP550_00885 IPR006352 Phosphoglucosamine mutase, bacterial type EP550_00885 IPR005841 Alpha-D-phosphohexomutase superfamily EP550_00890 IPR012349 FMN-binding split barrel EP550_00890 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal EP550_00890 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative EP550_00890 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site EP550_00890 IPR000659 Pyridoxamine 5'-phosphate oxidase EP550_00895 IPR041122 RecJ, OB domain EP550_00895 IPR004610 Bacterial RecJ exonuclease EP550_00895 IPR003156 DHHA1 domain EP550_00895 IPR038763 DHH phosphoesterase superfamily EP550_00895 IPR001667 DDH domain EP550_00915 IPR013785 Aldolase-type TIM barrel EP550_00915 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal EP550_00920 IPR039901 3-deoxy-D-manno-octulosonic acid transferase EP550_00920 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily EP550_00920 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal EP550_00925 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal EP550_00925 IPR006700 Ribosomal RNA small subunit methyltransferase E EP550_00925 IPR029028 Alpha/beta knot methyltransferases EP550_00930 IPR023408 Mechanosensitive ion channel MscS domain superfamily EP550_00930 IPR010920 LSM domain superfamily EP550_00930 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 EP550_00930 IPR006686 Mechanosensitive ion channel MscS, conserved site EP550_00930 IPR006685 Mechanosensitive ion channel MscS EP550_00930 IPR011066 Mechanosensitive ion channel MscS, C-terminal EP550_00940 IPR020845 AMP-binding, conserved site EP550_00940 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain EP550_00940 IPR011904 Acetate-CoA ligase EP550_00940 IPR000873 AMP-dependent synthetase/ligase EP550_00940 IPR042099 AMP-dependent synthetase-like superfamily EP550_00940 IPR025110 AMP-binding enzyme, C-terminal domain EP550_00945 IPR036380 Isochorismatase-like superfamily EP550_00945 IPR000868 Isochorismatase-like EP550_00950 IPR036390 Winged helix DNA-binding domain superfamily EP550_00950 IPR000485 AsnC-type HTH domain EP550_00950 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_00950 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP550_00950 IPR019888 Transcription regulator AsnC-type EP550_00950 IPR011008 Dimeric alpha-beta barrel EP550_00955 IPR036661 Luciferase-like domain superfamily EP550_00955 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG EP550_00955 IPR011251 Luciferase-like domain EP550_00960 IPR005025 NADPH-dependent FMN reductase-like EP550_00960 IPR029039 Flavoprotein-like superfamily EP550_00960 IPR019912 FMN reductase, MsuE-like EP550_00965 IPR016032 Signal transduction response regulator, C-terminal effector EP550_00965 IPR000792 Transcription regulator LuxR, C-terminal EP550_00965 IPR001789 Signal transduction response regulator, receiver domain EP550_00965 IPR011006 CheY-like superfamily EP550_00975 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP550_00975 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP550_00975 IPR005467 Histidine kinase domain EP550_00975 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_00975 IPR003594 Histidine kinase/HSP90-like ATPase EP550_00975 IPR003660 HAMP domain EP550_00975 IPR011006 CheY-like superfamily EP550_00975 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP550_00975 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain EP550_00975 IPR038188 TorS, sensor domain superfamily EP550_00975 IPR036641 HPT domain superfamily EP550_00975 IPR001789 Signal transduction response regulator, receiver domain EP550_00975 IPR037952 Sensor histidine kinase TorS, sensor domain EP550_00980 IPR007436 Protein of unknown function DUF485 EP550_00985 IPR014083 Cation/acetate symporter ActP EP550_00985 IPR038377 Sodium/glucose symporter superfamily EP550_00985 IPR001734 Sodium/solute symporter EP550_00985 IPR018212 Sodium/solute symporter, conserved site EP550_00995 IPR018093 BCCT transporter, conserved site EP550_00995 IPR000060 BCCT transporter family EP550_01005 IPR000160 GGDEF domain EP550_01005 IPR033424 Membrane-associated sensor domain EP550_01005 IPR029787 Nucleotide cyclase EP550_01015 IPR017871 ABC transporter, conserved site EP550_01015 IPR003439 ABC transporter-like EP550_01015 IPR041102 UvrA, interaction domain EP550_01015 IPR004602 UvrABC system subunit A EP550_01015 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_01015 IPR041552 UvrA DNA-binding domain EP550_01020 IPR011075 Tetracyclin repressor-like, C-terminal domain EP550_01020 IPR009057 Homeobox-like domain superfamily EP550_01020 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP550_01020 IPR001647 DNA-binding HTH domain, TetR-type EP550_01035 IPR009707 Membrane protein GlpM/YdgC EP550_01040 IPR029056 Ribokinase-like EP550_01040 IPR034291 Thiamine phosphate synthase EP550_01040 IPR022998 Thiamine phosphate synthase/TenI EP550_01040 IPR004305 Thiaminase-2/PQQC EP550_01040 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase EP550_01040 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase EP550_01040 IPR016084 Haem oxygenase-like, multi-helical EP550_01040 IPR036206 Thiamin phosphate synthase superfamily EP550_01040 IPR013785 Aldolase-type TIM barrel EP550_01050 IPR011701 Major facilitator superfamily EP550_01050 IPR020846 Major facilitator superfamily domain EP550_01050 IPR036259 MFS transporter superfamily EP550_01055 IPR012340 Nucleic acid-binding, OB-fold EP550_01055 IPR011344 Single-stranded DNA-binding protein EP550_01055 IPR000424 Primosome PriB/single-strand DNA-binding EP550_01065 IPR004471 Branched-chain amino acid transport, AzlC EP550_01065 IPR011606 Branched-chain amino acid transport, permease EP550_01075 IPR011265 GABA permease EP550_01075 IPR004840 Amino acid permease, conserved site EP550_01075 IPR004841 Amino acid permease/ SLC12A domain EP550_01080 IPR004839 Aminotransferase, class I/classII EP550_01080 IPR015424 Pyridoxal phosphate-dependent transferase EP550_01080 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_01080 IPR000524 Transcription regulator HTH, GntR EP550_01080 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_01080 IPR036390 Winged helix DNA-binding domain superfamily EP550_01085 IPR004632 4-aminobutyrate aminotransferase, bacterial EP550_01085 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_01085 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_01085 IPR005814 Aminotransferase class-III EP550_01085 IPR015424 Pyridoxal phosphate-dependent transferase EP550_01090 IPR015590 Aldehyde dehydrogenase domain EP550_01090 IPR010102 Succinate semialdehyde dehydrogenase EP550_01090 IPR016160 Aldehyde dehydrogenase, cysteine active site EP550_01090 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_01090 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_01090 IPR016161 Aldehyde/histidinol dehydrogenase EP550_01090 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP550_01095 IPR036390 Winged helix DNA-binding domain superfamily EP550_01095 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_01095 IPR000847 Transcription regulator HTH, LysR EP550_01100 IPR000868 Isochorismatase-like EP550_01100 IPR036380 Isochorismatase-like superfamily EP550_01105 IPR003829 Pirin, N-terminal domain EP550_01105 IPR011051 RmlC-like cupin domain superfamily EP550_01105 IPR014710 RmlC-like jelly roll fold EP550_01105 IPR012093 Pirin EP550_01105 IPR008778 Pirin, C-terminal domain EP550_01110 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_01110 IPR002937 Amine oxidase EP550_01110 IPR014105 Carotenoid/retinoid oxidoreductase EP550_01115 IPR004291 Transposase, IS66 EP550_01115 IPR024474 Zinc-finger binding domain of transposase IS66 EP550_01115 IPR024463 Transposase TnpC, homeodomain EP550_01115 IPR039552 Transposase IS66, C-terminal EP550_01150 IPR011701 Major facilitator superfamily EP550_01150 IPR020846 Major facilitator superfamily domain EP550_01150 IPR036259 MFS transporter superfamily EP550_01150 IPR005829 Sugar transporter, conserved site EP550_01155 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_01155 IPR000847 Transcription regulator HTH, LysR EP550_01155 IPR036390 Winged helix DNA-binding domain superfamily EP550_01155 IPR005119 LysR, substrate-binding EP550_01175 IPR023210 NADP-dependent oxidoreductase domain EP550_01175 IPR036812 NADP-dependent oxidoreductase domain superfamily EP550_01175 IPR020471 Aldo/keto reductase EP550_01175 IPR018170 Aldo/keto reductase, conserved site EP550_01180 IPR009057 Homeobox-like domain superfamily EP550_01180 IPR003313 AraC-type arabinose-binding/dimerisation domain EP550_01180 IPR018062 HTH domain AraC-type, conserved site EP550_01180 IPR018060 DNA binding HTH domain, AraC-type EP550_01180 IPR020449 Transcription regulator HTH, AraC- type EP550_01180 IPR023699 Transcription activator HTH, RhaR EP550_01180 IPR037923 Transcription regulator HTH-like EP550_01180 IPR014710 RmlC-like jelly roll fold EP550_01210 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_01210 IPR036390 Winged helix DNA-binding domain superfamily EP550_01210 IPR002577 Helix-turn-helix, HxlR type EP550_01210 IPR011991 ArsR-like helix-turn-helix domain EP550_01220 IPR003680 Flavodoxin-like fold EP550_01220 IPR029039 Flavoprotein-like superfamily EP550_01240 IPR003855 Potassium transporter EP550_01240 IPR023051 Potassium uptake protein, low affinity, Kup EP550_01265 IPR000425 Major intrinsic protein EP550_01265 IPR023271 Aquaporin-like EP550_01265 IPR022357 Major intrinsic protein, conserved site EP550_01265 IPR023743 Aquaporin Z EP550_01265 IPR034294 Aquaporin transporter EP550_01280 IPR011060 Ribulose-phosphate binding barrel EP550_01280 IPR013785 Aldolase-type TIM barrel EP550_01280 IPR006062 Histidine biosynthesis EP550_01280 IPR004651 Histidine biosynthesis, HisF EP550_01285 IPR002575 Aminoglycoside phosphotransferase EP550_01285 IPR011009 Protein kinase-like domain superfamily EP550_01285 IPR005280 Homoserine kinase, type II EP550_01300 IPR011008 Dimeric alpha-beta barrel EP550_01300 IPR007138 Antibiotic biosynthesis monooxygenase domain EP550_01315 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase EP550_01315 IPR011060 Ribulose-phosphate binding barrel EP550_01315 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA EP550_01315 IPR013785 Aldolase-type TIM barrel EP550_01315 IPR006062 Histidine biosynthesis EP550_01330 IPR010139 Imidazole glycerol phosphate synthase, subunit H EP550_01330 IPR029062 Class I glutamine amidotransferase-like EP550_01330 IPR017926 Glutamine amidotransferase EP550_01335 IPR000807 Imidazoleglycerol-phosphate dehydratase EP550_01335 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily EP550_01335 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site EP550_01335 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_01355 IPR017255 Acetyltransferase, GNAT, predicted EP550_01355 IPR023072 Acetyltransferase, YpeA EP550_01355 IPR000182 GNAT domain EP550_01355 IPR016181 Acyl-CoA N-acyltransferase EP550_01360 IPR003702 Acetyl-CoA hydrolase/transferase EP550_01360 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain EP550_01360 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily EP550_01360 IPR037171 NagB/RpiA transferase-like EP550_01360 IPR017821 Succinate CoA transferase EP550_01370 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP550_01370 IPR003594 Histidine kinase/HSP90-like ATPase EP550_01370 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_01370 IPR005467 Histidine kinase domain EP550_01370 IPR003660 HAMP domain EP550_01370 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP550_01370 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP550_01375 IPR001789 Signal transduction response regulator, receiver domain EP550_01375 IPR011006 CheY-like superfamily EP550_01375 IPR001867 OmpR/PhoB-type DNA-binding domain EP550_01375 IPR016032 Signal transduction response regulator, C-terminal effector EP550_01375 IPR039420 Transcriptional regulatory protein WalR-like EP550_01375 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_01380 IPR022967 RNA-binding domain, S1 EP550_01380 IPR012337 Ribonuclease H-like superfamily EP550_01380 IPR041692 HHH domain 9 EP550_01380 IPR012340 Nucleic acid-binding, OB-fold EP550_01380 IPR010994 RuvA domain 2-like EP550_01380 IPR023323 Tex-like domain superfamily EP550_01380 IPR037027 YqgF/RNase H-like domain superfamily EP550_01380 IPR003029 S1 domain EP550_01380 IPR023319 Tex-like protein, HTH domain superfamily EP550_01380 IPR032639 Tex protein, YqgF-like domain EP550_01380 IPR018974 Tex-like protein, N-terminal EP550_01380 IPR006641 YqgF/RNase H-like domain EP550_01385 IPR036513 STAS domain superfamily EP550_01385 IPR002645 STAS domain EP550_01385 IPR011547 SLC26A/SulP transporter domain EP550_01385 IPR001902 SLC26A/SulP transporter EP550_01390 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_01390 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_01390 IPR036291 NAD(P)-binding domain superfamily EP550_01395 IPR015424 Pyridoxal phosphate-dependent transferase EP550_01395 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_01395 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme EP550_01395 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase EP550_01395 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_01400 IPR003439 ABC transporter-like EP550_01400 IPR017871 ABC transporter, conserved site EP550_01400 IPR022374 Energy-dependent translational throttle protein EttA EP550_01400 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_01400 IPR003593 AAA+ ATPase domain EP550_01400 IPR032781 ABC-transporter extension domain EP550_01425 IPR007318 Phospholipid methyltransferase EP550_01445 IPR006143 RND efflux pump, membrane fusion protein EP550_01445 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain EP550_01445 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB EP550_01450 IPR001036 Acriflavin resistance protein EP550_01450 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains EP550_01450 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA EP550_01455 IPR027469 Cation efflux transmembrane domain superfamily EP550_01455 IPR036837 Cation efflux protein, cytoplasmic domain superfamily EP550_01455 IPR002524 Cation efflux protein EP550_01485 IPR004840 Amino acid permease, conserved site EP550_01485 IPR004841 Amino acid permease/ SLC12A domain EP550_01500 IPR000924 Glutamyl/glutaminyl-tRNA synthetase EP550_01500 IPR033910 Glutamyl-tRNA synthetase EP550_01500 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_01500 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain EP550_01500 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial EP550_01500 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site EP550_01500 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 EP550_01500 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding EP550_01510 IPR005669 Thiosulphate/Sulfate-binding protein EP550_01510 IPR000957 Sulphate/thiosulphate-binding, conserved site EP550_01510 IPR034408 Sulphate/thiosulphate-binding site EP550_01515 IPR002903 Ribosomal RNA small subunit methyltransferase H EP550_01515 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily EP550_01515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_01525 IPR036138 Penicillin-binding protein, dimerisation domain superfamily EP550_01525 IPR005311 Penicillin-binding protein, dimerisation domain EP550_01525 IPR001460 Penicillin-binding protein, transpeptidase EP550_01525 IPR012338 Beta-lactamase/transpeptidase-like EP550_01525 IPR037532 Peptidoglycan D,D-transpeptidase FtsI EP550_01530 IPR036565 Mur-like, catalytic domain superfamily EP550_01530 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase EP550_01530 IPR035911 MurE/MurF, N-terminal EP550_01530 IPR000713 Mur ligase, N-terminal catalytic domain EP550_01530 IPR013221 Mur ligase, central EP550_01530 IPR036615 Mur ligase, C-terminal domain superfamily EP550_01530 IPR004101 Mur ligase, C-terminal EP550_01535 IPR013221 Mur ligase, central EP550_01535 IPR000713 Mur ligase, N-terminal catalytic domain EP550_01535 IPR036565 Mur-like, catalytic domain superfamily EP550_01535 IPR004101 Mur ligase, C-terminal EP550_01535 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase EP550_01535 IPR035911 MurE/MurF, N-terminal EP550_01535 IPR036615 Mur ligase, C-terminal domain superfamily EP550_01540 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase EP550_01540 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site EP550_01540 IPR000715 Glycosyl transferase, family 4 EP550_01550 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted EP550_01550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_01550 IPR025714 Methyltransferase domain EP550_01555 IPR023346 Lysozyme-like domain superfamily EP550_01555 IPR031376 Penicillin-binding protein, OB-like domain EP550_01555 IPR001460 Penicillin-binding protein, transpeptidase EP550_01555 IPR001264 Glycosyl transferase, family 51 EP550_01555 IPR012338 Beta-lactamase/transpeptidase-like EP550_01555 IPR036950 Penicillin binding protein transglycosylase domain EP550_01580 IPR013355 Type IV pilus secretin PilQ EP550_01580 IPR021731 AMIN domain EP550_01580 IPR038591 NolW-like superfamily EP550_01580 IPR001775 GspD/PilQ family EP550_01580 IPR005644 NolW-like EP550_01580 IPR004846 Type II/III secretion system EP550_01580 IPR011662 Secretin/TonB, short N-terminal domain EP550_01580 IPR004845 Type II secretion system GspD, conserved site EP550_01585 IPR023000 Shikimate kinase, conserved site EP550_01585 IPR000623 Shikimate kinase/Threonine synthase-like 1 EP550_01585 IPR031322 Shikimate kinase/gluconokinase EP550_01585 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_01590 IPR030963 3-dehydroquinate synthase family EP550_01590 IPR016037 3-dehydroquinate synthase AroB EP550_01590 IPR030960 3-dehydroquinate synthase domain EP550_01600 IPR006982 Glutamate synthase, central-N EP550_01600 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily EP550_01600 IPR002489 Glutamate synthase, alpha subunit, C-terminal EP550_01600 IPR017932 Glutamine amidotransferase type 2 domain EP550_01600 IPR002932 Glutamate synthase domain EP550_01600 IPR029055 Nucleophile aminohydrolases, N-terminal EP550_01600 IPR013785 Aldolase-type TIM barrel EP550_01605 IPR028261 Dihydroprymidine dehydrogenase domain II EP550_01605 IPR023753 FAD/NAD(P)-binding domain EP550_01605 IPR009051 Alpha-helical ferredoxin EP550_01605 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 EP550_01605 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_01615 IPR023353 LemA-like domain superfamily EP550_01615 IPR007156 LemA EP550_01620 IPR007621 TPM domain EP550_01630 IPR001082 Fimbrial protein pilin EP550_01630 IPR012902 Prokaryotic N-terminal methylation site EP550_01635 IPR031726 Protein glycosylation ligase domain EP550_01635 IPR007016 O-antigen ligase-related EP550_01635 IPR021797 Virulence factor membrane-bound polymerase, C-terminal EP550_01640 IPR012347 Ferritin-like EP550_01640 IPR009040 Ferritin-like diiron domain EP550_01640 IPR009078 Ferritin-like superfamily EP550_01640 IPR008331 Ferritin/DPS protein domain EP550_01640 IPR002024 Bacterioferritin EP550_01645 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily EP550_01645 IPR007419 BFD-like [2Fe-2S]-binding domain EP550_01650 IPR006175 YjgF/YER057c/UK114 family EP550_01650 IPR035959 RutC-like superfamily EP550_01650 IPR019897 RidA, conserved site EP550_01650 IPR006056 RidA family EP550_01655 IPR012675 Beta-grasp domain superfamily EP550_01655 IPR002912 ACT domain EP550_01655 IPR003607 HD/PDEase domain EP550_01655 IPR004811 RelA/SpoT family EP550_01655 IPR007685 RelA/SpoT EP550_01655 IPR012676 TGS-like EP550_01655 IPR033655 RelA, TGS domain EP550_01655 IPR004095 TGS EP550_01665 IPR012293 RNA polymerase subunit, RPB6/omega EP550_01665 IPR036161 RPB6/omega subunit-like superfamily EP550_01665 IPR003716 DNA-directed RNA polymerase, omega subunit EP550_01665 IPR006110 RNA polymerase, subunit omega/K/RPB6 EP550_01670 IPR008144 Guanylate kinase-like domain EP550_01670 IPR008145 Guanylate kinase/L-type calcium channel beta subunit EP550_01670 IPR020590 Guanylate kinase, conserved site EP550_01670 IPR017665 Guanylate kinase EP550_01670 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_01675 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase EP550_01715 IPR000307 Ribosomal protein S16 EP550_01715 IPR023803 Ribosomal protein S16 domain superfamily EP550_01715 IPR020592 Ribosomal protein S16, conserved site EP550_01720 IPR036976 RimM, N-terminal domain superfamily EP550_01720 IPR009000 Translation protein, beta-barrel domain superfamily EP550_01720 IPR002676 RimM, N-terminal EP550_01720 IPR011033 PRC-barrel-like superfamily EP550_01720 IPR027275 PRC-barrel domain EP550_01720 IPR011961 16S rRNA processing protein RimM EP550_01725 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain EP550_01725 IPR029028 Alpha/beta knot methyltransferases EP550_01725 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal EP550_01725 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal EP550_01725 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria EP550_01730 IPR018257 Ribosomal protein L19, conserved site EP550_01730 IPR038657 Ribosomal protein L19 superfamily EP550_01730 IPR001857 Ribosomal protein L19 EP550_01730 IPR008991 Translation protein SH3-like domain superfamily EP550_01735 IPR029058 Alpha/Beta hydrolase fold EP550_01735 IPR000073 Alpha/beta hydrolase fold-1 EP550_01740 IPR004961 Lipase chaperone EP550_01745 IPR002501 Pseudouridine synthase II, N-terminal EP550_01745 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP550_01745 IPR015947 PUA-like superfamily EP550_01745 IPR014780 tRNA pseudouridine synthase II, TruB EP550_01745 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal EP550_01745 IPR032819 tRNA pseudouridylate synthase B, C-terminal EP550_01750 IPR002781 Transmembrane protein TauE-like EP550_01760 IPR000620 EamA domain EP550_01765 IPR000620 EamA domain EP550_01770 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 EP550_01770 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site EP550_01770 IPR036291 NAD(P)-binding domain superfamily EP550_01770 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain EP550_01770 IPR002912 ACT domain EP550_01770 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EP550_01775 IPR016164 FAD-linked oxidase-like, C-terminal EP550_01775 IPR036318 FAD-binding, type PCMH-like superfamily EP550_01775 IPR004113 FAD-linked oxidase, C-terminal EP550_01775 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 EP550_01775 IPR016166 FAD-binding domain, PCMH-type EP550_01775 IPR006094 FAD linked oxidase, N-terminal EP550_01775 IPR004490 Glycolate oxidase subunit GlcD EP550_01785 IPR011008 Dimeric alpha-beta barrel EP550_01785 IPR007138 Antibiotic biosynthesis monooxygenase domain EP550_01790 IPR029039 Flavoprotein-like superfamily EP550_01790 IPR003680 Flavodoxin-like fold EP550_01800 IPR005829 Sugar transporter, conserved site EP550_01800 IPR011701 Major facilitator superfamily EP550_01800 IPR020846 Major facilitator superfamily domain EP550_01800 IPR036259 MFS transporter superfamily EP550_01820 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone EP550_01820 IPR018152 Superoxide dismutase, copper/zinc, binding site EP550_01820 IPR001424 Superoxide dismutase, copper/zinc binding domain EP550_01820 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily EP550_01825 IPR002549 Transmembrane protein TqsA-like EP550_01830 IPR025669 AAA domain EP550_01830 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_01850 IPR013216 Methyltransferase type 11 EP550_01850 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_01860 IPR004840 Amino acid permease, conserved site EP550_01860 IPR004841 Amino acid permease/ SLC12A domain EP550_01865 IPR033524 Leu/Phe/Val dehydrogenases active site EP550_01865 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain EP550_01865 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal EP550_01865 IPR014362 Glutamate dehydrogenase EP550_01865 IPR033922 NAD(P) binding domain of glutamate dehydrogenase EP550_01865 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase EP550_01865 IPR036291 NAD(P)-binding domain superfamily EP550_01870 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_01870 IPR015424 Pyridoxal phosphate-dependent transferase EP550_01870 IPR005814 Aminotransferase class-III EP550_01870 IPR026330 Succinylornithine transaminase EP550_01870 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria EP550_01870 IPR004636 Acetylornithine/Succinylornithine transaminase family EP550_01870 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_01875 IPR016181 Acyl-CoA N-acyltransferase EP550_01875 IPR017650 Arginine N-succinyltransferase EP550_01875 IPR007041 Arginine N-succinyltransferase AstA/AruG EP550_01880 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_01880 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP550_01880 IPR016160 Aldehyde dehydrogenase, cysteine active site EP550_01880 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_01880 IPR016161 Aldehyde/histidinol dehydrogenase EP550_01880 IPR015590 Aldehyde dehydrogenase domain EP550_01880 IPR017649 Succinylglutamate-semialdehyde dehydrogenase EP550_01885 IPR007079 Succinylarginine dihydrolase EP550_01885 IPR037031 Succinylarginine dihydrolase superfamily EP550_01890 IPR016681 Succinylglutamate desuccinylase EP550_01890 IPR007036 Succinylglutamate desuccinylase/aspartoacylase EP550_01920 IPR005119 LysR, substrate-binding EP550_01920 IPR036390 Winged helix DNA-binding domain superfamily EP550_01920 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_01920 IPR000847 Transcription regulator HTH, LysR EP550_01925 IPR000620 EamA domain EP550_01940 IPR006194 Glycine-tRNA synthetase, heterodimeric EP550_01940 IPR008909 DALR anticodon binding EP550_01940 IPR015944 Glycine-tRNA ligase, beta subunit EP550_01945 IPR002310 Glycine-tRNA ligase, alpha subunit EP550_01945 IPR006194 Glycine-tRNA synthetase, heterodimeric EP550_01970 IPR000644 CBS domain EP550_01975 IPR007168 Phage shock protein, PspC, N-terminal EP550_01985 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_01985 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain EP550_01985 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_01985 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_01985 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_01985 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_01985 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_01995 IPR036291 NAD(P)-binding domain superfamily EP550_01995 IPR041121 SDH, C-terminal EP550_01995 IPR011342 Shikimate dehydrogenase EP550_01995 IPR022893 Shikimate dehydrogenase family EP550_01995 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase EP550_01995 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal EP550_02000 IPR001260 Coproporphyrinogen III oxidase, aerobic EP550_02000 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily EP550_02000 IPR018375 Coproporphyrinogen III oxidase, conserved site EP550_02005 IPR036144 RibA-like superfamily EP550_02005 IPR032677 GTP cyclohydrolase II EP550_02005 IPR000926 GTP cyclohydrolase II, RibA EP550_02010 IPR029061 Thiamin diphosphate-binding fold EP550_02010 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II EP550_02010 IPR005475 Transketolase-like, pyrimidine-binding domain EP550_02010 IPR033248 Transketolase, C-terminal domain EP550_02010 IPR020826 Transketolase binding site EP550_02010 IPR005477 Deoxyxylulose-5-phosphate synthase EP550_02015 IPR033942 Inositol monophosphatase EP550_02015 IPR020583 Inositol monophosphatase, metal-binding site EP550_02015 IPR000760 Inositol monophosphatase-like EP550_02015 IPR020550 Inositol monophosphatase, conserved site EP550_02015 IPR022337 Inositol monophosphatase, SuhB EP550_02020 IPR014014 RNA helicase, DEAD-box type, Q motif EP550_02020 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site EP550_02020 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_02020 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP550_02020 IPR034415 CsdA, RNA recognition motif EP550_02020 IPR021046 Cold-shock protein, DEAD box A, C-terminal EP550_02020 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily EP550_02020 IPR028618 ATP-dependent RNA helicase DeaD EP550_02020 IPR001650 Helicase, C-terminal EP550_02020 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain EP550_02020 IPR011545 DEAD/DEAH box helicase domain EP550_02030 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl EP550_02030 IPR017871 ABC transporter, conserved site EP550_02030 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_02030 IPR003439 ABC transporter-like EP550_02030 IPR003593 AAA+ ATPase domain EP550_02035 IPR030802 ABC transporter permease MalE EP550_02035 IPR003453 ABC transport permease subunit MlaE, Proteobacteria EP550_02045 IPR042245 Tgt2/MlaC superfamily EP550_02045 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC EP550_02055 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB EP550_02055 IPR004488 Magnesium/cobalt transport protein CorA EP550_02060 IPR031100 LOG family EP550_02060 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG EP550_02065 IPR020476 NUDIX hydrolase EP550_02065 IPR015797 NUDIX hydrolase-like domain superfamily EP550_02065 IPR020084 NUDIX hydrolase, conserved site EP550_02065 IPR000086 NUDIX hydrolase domain EP550_02070 IPR005222 Competence protein ComF EP550_02070 IPR000836 Phosphoribosyltransferase domain EP550_02070 IPR029057 Phosphoribosyltransferase-like EP550_02075 IPR004609 ATP-dependent DNA helicase RecG EP550_02075 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_02075 IPR011545 DEAD/DEAH box helicase domain EP550_02075 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP550_02075 IPR001650 Helicase, C-terminal EP550_02075 IPR033454 RecG, wedge domain EP550_02075 IPR012340 Nucleic acid-binding, OB-fold EP550_02085 IPR038404 TRAP transporter solute receptor DctP superfamily EP550_02090 IPR002123 Phospholipid/glycerol acyltransferase EP550_02090 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB EP550_02090 IPR041728 GPAT/DHAPAT, acyltransferase domain EP550_02090 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase EP550_02095 IPR003703 Acyl-CoA thioesterase EP550_02095 IPR029069 HotDog domain superfamily EP550_02100 IPR033380 Glutamate-aspartate symport protein GltP/GltT EP550_02100 IPR034703 Proton/glutamate-aspartate symporter GltP EP550_02100 IPR001991 Sodium:dicarboxylate symporter EP550_02100 IPR018107 Sodium:dicarboxylate symporter, conserved site EP550_02100 IPR036458 Sodium:dicarboxylate symporter superfamily EP550_02110 IPR030393 EngB-type guanine nucleotide-binding (G) domain EP550_02110 IPR006073 GTP binding domain EP550_02110 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_02110 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC EP550_02115 IPR030489 Transcription regulator Rrf2-type, conserved site EP550_02115 IPR036390 Winged helix DNA-binding domain superfamily EP550_02115 IPR023761 Transcriptional repressor HTH, NsrR EP550_02115 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_02115 IPR000944 Transcription regulator Rrf2-type EP550_02120 IPR012292 Globin/Protoglobin EP550_02120 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP550_02120 IPR000971 Globin EP550_02120 IPR009050 Globin-like superfamily EP550_02120 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP550_02120 IPR017938 Riboflavin synthase-like beta-barrel EP550_02120 IPR017927 FAD-binding domain, ferredoxin reductase-type EP550_02120 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain EP550_02120 IPR023950 Flavohemoprotein EP550_02125 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_02125 IPR033186 Helicase HerA-like C-terminal EP550_02130 IPR006233 Cystathionine beta-lyase, bacterial EP550_02130 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme EP550_02130 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_02130 IPR015424 Pyridoxal phosphate-dependent transferase EP550_02130 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_02135 IPR029062 Class I glutamine amidotransferase-like EP550_02135 IPR017926 Glutamine amidotransferase EP550_02140 IPR018268 Ribosomal protein S10, conserved site EP550_02140 IPR027486 Ribosomal protein S10 domain EP550_02140 IPR001848 Ribosomal protein S10 EP550_02140 IPR036838 Ribosomal protein S10 domain superfamily EP550_02145 IPR009000 Translation protein, beta-barrel domain superfamily EP550_02145 IPR019926 Ribosomal protein L3, conserved site EP550_02145 IPR019927 Ribosomal protein L3, bacterial/organelle-type EP550_02145 IPR000597 Ribosomal protein L3 EP550_02150 IPR013005 50S ribosomal protein uL4 EP550_02150 IPR023574 Ribosomal protein L4 domain superfamily EP550_02150 IPR002136 Ribosomal protein L4/L1e EP550_02155 IPR013025 Ribosomal protein L25/L23 EP550_02155 IPR012678 Ribosomal protein L23/L15e core domain superfamily EP550_02155 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily EP550_02160 IPR008991 Translation protein SH3-like domain superfamily EP550_02160 IPR014726 Ribosomal protein L2, domain 3 EP550_02160 IPR022669 Ribosomal protein L2, C-terminal EP550_02160 IPR005880 Ribosomal protein L2, bacterial/organellar-type EP550_02160 IPR002171 Ribosomal protein L2 EP550_02160 IPR014722 Ribosomal protein L2, domain 2 EP550_02160 IPR022666 Ribosomal Proteins L2, RNA binding domain EP550_02160 IPR012340 Nucleic acid-binding, OB-fold EP550_02165 IPR023575 Ribosomal protein S19, superfamily EP550_02165 IPR005732 Ribosomal protein S19, bacterial-type EP550_02165 IPR002222 Ribosomal protein S19/S15 EP550_02165 IPR020934 Ribosomal protein S19 conserved site EP550_02170 IPR036394 Ribosomal protein L22/L17 superfamily EP550_02170 IPR018260 Ribosomal protein L22/L17, conserved site EP550_02170 IPR001063 Ribosomal protein L22/L17 EP550_02170 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type EP550_02175 IPR015946 K homology domain-like, alpha/beta EP550_02175 IPR004044 K Homology domain, type 2 EP550_02175 IPR005704 Ribosomal protein S3, bacterial-type EP550_02175 IPR001351 Ribosomal protein S3, C-terminal EP550_02175 IPR004087 K Homology domain EP550_02175 IPR009019 K homology domain superfamily, prokaryotic type EP550_02175 IPR018280 Ribosomal protein S3, conserved site EP550_02175 IPR036419 Ribosomal protein S3, C-terminal domain superfamily EP550_02180 IPR020798 Ribosomal protein L16, conserved site EP550_02180 IPR000114 Ribosomal protein L16 EP550_02180 IPR036920 Ribosomal protein L10e/L16 superfamily EP550_02180 IPR016180 Ribosomal protein L10e/L16 EP550_02185 IPR036049 Ribosomal protein L29/L35 superfamily EP550_02185 IPR001854 Ribosomal protein L29/L35 EP550_02190 IPR019979 Ribosomal protein S17, conserved site EP550_02190 IPR012340 Nucleic acid-binding, OB-fold EP550_02190 IPR019984 30S ribosomal protein S17 EP550_02190 IPR000266 Ribosomal protein S17/S11 EP550_02195 IPR036853 Ribosomal protein L14 superfamily EP550_02195 IPR019972 Ribosomal protein L14P, conserved site EP550_02195 IPR005745 Ribosomal protein L14P, bacterial-type EP550_02195 IPR000218 Ribosomal protein L14P EP550_02200 IPR003256 Ribosomal protein L24 EP550_02200 IPR005824 KOW EP550_02200 IPR014722 Ribosomal protein L2, domain 2 EP550_02200 IPR041988 Ribosomal Protein L26/L24, KOW domain EP550_02200 IPR005825 Ribosomal protein L24/L26, conserved site EP550_02200 IPR008991 Translation protein SH3-like domain superfamily EP550_02205 IPR002132 Ribosomal protein L5 EP550_02205 IPR020930 Ribosomal protein L5, bacterial-type EP550_02205 IPR031309 Ribosomal protein L5, C-terminal EP550_02205 IPR031310 Ribosomal protein L5, N-terminal EP550_02205 IPR022803 Ribosomal protein L5 domain superfamily EP550_02205 IPR020929 Ribosomal protein L5, conserved site EP550_02210 IPR001209 Ribosomal protein S14 EP550_02210 IPR023036 Ribosomal protein S14, bacterial/plastid EP550_02210 IPR018271 Ribosomal protein S14, conserved site EP550_02215 IPR000630 Ribosomal protein S8 EP550_02215 IPR035987 Ribosomal protein S8 superfamily EP550_02220 IPR000702 Ribosomal protein L6 EP550_02220 IPR002358 Ribosomal protein L6, conserved site EP550_02220 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily EP550_02220 IPR020040 Ribosomal protein L6, alpha-beta domain EP550_02220 IPR019906 Ribosomal protein L6, bacterial-type EP550_02225 IPR005484 Ribosomal protein L18 EP550_02225 IPR004389 Ribosomal protein L18, bacterial-type EP550_02230 IPR005712 Ribosomal protein S5, bacterial-type EP550_02230 IPR005324 Ribosomal protein S5, C-terminal EP550_02230 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_02230 IPR013810 Ribosomal protein S5, N-terminal EP550_02230 IPR018192 Ribosomal protein S5, N-terminal, conserved site EP550_02230 IPR000851 Ribosomal protein S5 EP550_02230 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP550_02235 IPR005996 Ribosomal protein L30, bacterial-type EP550_02235 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain EP550_02235 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily EP550_02240 IPR036227 Ribosomal L18e/L15P superfamily EP550_02240 IPR005749 Ribosomal protein L15, bacterial-type EP550_02240 IPR021131 Ribosomal protein L18e/L15P EP550_02240 IPR001196 Ribosomal protein L15, conserved site EP550_02240 IPR030878 Ribosomal protein L15 EP550_02245 IPR026593 Protein translocase subunit SecY EP550_02245 IPR002208 SecY/SEC61-alpha family EP550_02245 IPR030659 SecY conserved site EP550_02245 IPR023201 SecY domain superfamily EP550_02250 IPR000473 Ribosomal protein L36 EP550_02250 IPR035977 Ribosomal protein L36 superfamily EP550_02255 IPR010979 Ribosomal protein S13-like, H2TH EP550_02255 IPR027437 30s ribosomal protein S13, C-terminal EP550_02255 IPR001892 Ribosomal protein S13 EP550_02255 IPR019980 Ribosomal protein S13, bacterial-type EP550_02255 IPR018269 Ribosomal protein S13, conserved site EP550_02260 IPR036967 Ribosomal protein S11 superfamily EP550_02260 IPR001971 Ribosomal protein S11 EP550_02260 IPR019981 Ribosomal protein S11, bacterial-type EP550_02260 IPR018102 Ribosomal S11, conserved site EP550_02265 IPR036986 RNA-binding S4 domain superfamily EP550_02265 IPR001912 Ribosomal protein S4/S9, N-terminal EP550_02265 IPR002942 RNA-binding S4 domain EP550_02265 IPR018079 Ribosomal protein S4, conserved site EP550_02265 IPR022801 Ribosomal protein S4/S9 EP550_02265 IPR005709 Ribosomal protein S4, bacterial-type EP550_02270 IPR011262 DNA-directed RNA polymerase, insert domain EP550_02270 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type EP550_02270 IPR011260 RNA polymerase, alpha subunit, C-terminal EP550_02270 IPR036643 DNA-directed RNA polymerase, insert domain superfamily EP550_02270 IPR011773 DNA-directed RNA polymerase, alpha subunit EP550_02270 IPR036603 RNA polymerase, RBP11-like subunit EP550_02275 IPR036373 Ribosomal protein L17 superfamily EP550_02275 IPR000456 Ribosomal protein L17 EP550_02280 IPR020946 Flavin monooxygenase-like EP550_02280 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_02285 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_02285 IPR006089 Acyl-CoA dehydrogenase, conserved site EP550_02285 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_02285 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_02285 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_02285 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_02285 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_02290 IPR005631 Flavinator of succinate dehydrogenase EP550_02290 IPR036714 Flavinator of succinate dehydrogenase superfamily EP550_02320 IPR012658 Conserved hypothetical protein CHP02443 EP550_02325 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 EP550_02325 IPR001567 Peptidase M3A/M3B catalytic domain EP550_02330 IPR001900 Ribonuclease II/R EP550_02330 IPR011129 Cold shock domain EP550_02330 IPR022966 Ribonuclease II/R, conserved site EP550_02330 IPR040476 RNase II/RNase R, cold shock domain EP550_02330 IPR004476 Ribonuclease II/ribonuclease R EP550_02330 IPR011805 Ribonuclease R EP550_02330 IPR022967 RNA-binding domain, S1 EP550_02330 IPR012340 Nucleic acid-binding, OB-fold EP550_02330 IPR003029 S1 domain EP550_02330 IPR013223 Ribonuclease B, N-terminal OB domain EP550_02330 IPR013668 Ribonuclease R winged-helix domain EP550_02370 IPR011234 Fumarylacetoacetase-like, C-terminal EP550_02370 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily EP550_02375 IPR011051 RmlC-like cupin domain superfamily EP550_02375 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily EP550_02375 IPR009057 Homeobox-like domain superfamily EP550_02375 IPR014710 RmlC-like jelly roll fold EP550_02375 IPR020449 Transcription regulator HTH, AraC- type EP550_02375 IPR018062 HTH domain AraC-type, conserved site EP550_02375 IPR018060 DNA binding HTH domain, AraC-type EP550_02380 IPR000620 EamA domain EP550_02385 IPR023679 Uncharacterised protein family UPF0761, bacterial EP550_02385 IPR017039 Virulence factor BrkB EP550_02390 IPR005025 NADPH-dependent FMN reductase-like EP550_02390 IPR008254 Flavodoxin/nitric oxide synthase EP550_02390 IPR001226 Flavodoxin, conserved site EP550_02390 IPR029039 Flavoprotein-like superfamily EP550_02390 IPR010089 Flavoprotein WrbA-like EP550_02395 IPR010079 Xanthine phosphoribosyltransferase EP550_02395 IPR029057 Phosphoribosyltransferase-like EP550_02395 IPR000836 Phosphoribosyltransferase domain EP550_02415 IPR002036 Endoribonuclease YbeY EP550_02415 IPR020549 Endoribonuclease YbeY, conserved site EP550_02415 IPR023091 Metalloprotease catalytic domain superfamily, predicted EP550_02420 IPR003714 PhoH-like protein EP550_02420 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_02425 IPR013848 Methylthiotransferase, N-terminal EP550_02425 IPR006638 Elp3/MiaB/NifB EP550_02425 IPR020612 Methylthiotransferase, conserved site EP550_02425 IPR005839 Methylthiotransferase EP550_02425 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB EP550_02425 IPR038135 Methylthiotransferase, N-terminal domain superfamily EP550_02425 IPR007197 Radical SAM EP550_02425 IPR023404 Radical SAM, alpha/beta horseshoe EP550_02425 IPR002792 TRAM domain EP550_02430 IPR011055 Duplicated hybrid motif EP550_02430 IPR023346 Lysozyme-like domain superfamily EP550_02430 IPR016047 Peptidase M23 EP550_02430 IPR010090 Phage tail tape measure protein EP550_02430 IPR000189 Prokaryotic transglycosylase, active site EP550_02430 IPR008258 Transglycosylase SLT domain 1 EP550_02440 IPR001557 L-lactate/malate dehydrogenase EP550_02440 IPR022383 Lactate/malate dehydrogenase, C-terminal EP550_02440 IPR001236 Lactate/malate dehydrogenase, N-terminal EP550_02440 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal EP550_02440 IPR010945 Malate dehydrogenase, type 2 EP550_02440 IPR036291 NAD(P)-binding domain superfamily EP550_02460 IPR002052 DNA methylase, N-6 adenine-specific, conserved site EP550_02460 IPR007473 Ribosomal RNA large subunit methyltransferase J EP550_02460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_02465 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase EP550_02465 IPR000462 CDP-alcohol phosphatidyltransferase EP550_02510 IPR006089 Acyl-CoA dehydrogenase, conserved site EP550_02510 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_02510 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_02510 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_02510 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_02510 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_02510 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_02515 IPR001647 DNA-binding HTH domain, TetR-type EP550_02515 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal EP550_02515 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP550_02515 IPR009057 Homeobox-like domain superfamily EP550_02525 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_02525 IPR036291 NAD(P)-binding domain superfamily EP550_02530 IPR034733 Acetyl-CoA carboxylase EP550_02530 IPR029045 ClpP/crotonase-like domain superfamily EP550_02530 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal EP550_02530 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal EP550_02535 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_02535 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_02535 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_02535 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_02535 IPR006089 Acyl-CoA dehydrogenase, conserved site EP550_02535 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_02535 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_02545 IPR005482 Biotin carboxylase, C-terminal EP550_02545 IPR011764 Biotin carboxylation domain EP550_02545 IPR011054 Rudiment single hybrid motif EP550_02545 IPR011761 ATP-grasp fold EP550_02545 IPR001882 Biotin-binding site EP550_02545 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain EP550_02545 IPR000089 Biotin/lipoyl attachment EP550_02545 IPR016185 Pre-ATP-grasp domain superfamily EP550_02545 IPR005481 Biotin carboxylase-like, N-terminal domain EP550_02545 IPR011053 Single hybrid motif EP550_02555 IPR036760 SspB-like superfamily EP550_02555 IPR007481 Stringent starvation protein B EP550_02560 IPR036282 Glutathione S-transferase, C-terminal domain superfamily EP550_02560 IPR040079 Glutathione Transferase family EP550_02560 IPR004045 Glutathione S-transferase, N-terminal EP550_02560 IPR004046 Glutathione S-transferase, C-terminal EP550_02560 IPR034341 Stringent starvation protein A, N-terminal EP550_02560 IPR036249 Thioredoxin-like superfamily EP550_02560 IPR010987 Glutathione S-transferase, C-terminal-like EP550_02565 IPR023035 Ribosomal protein S9, bacterial/plastid EP550_02565 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP550_02565 IPR000754 Ribosomal protein S9 EP550_02565 IPR020574 Ribosomal protein S9, conserved site EP550_02565 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_02570 IPR005823 Ribosomal protein L13, bacterial-type EP550_02570 IPR005822 Ribosomal protein L13 EP550_02570 IPR036899 Ribosomal protein L13 superfamily EP550_02575 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase EP550_02575 IPR005255 PdxA family EP550_02580 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm EP550_02580 IPR023165 rRNA adenine dimethylase-like EP550_02580 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site EP550_02580 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal EP550_02580 IPR011530 Ribosomal RNA adenine dimethylase EP550_02580 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_02585 IPR029052 Metallo-dependent phosphatase-like EP550_02585 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type EP550_02585 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) EP550_02605 IPR006073 GTP binding domain EP550_02605 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_02605 IPR030394 HflX-type guanine nucleotide-binding (G) domain EP550_02605 IPR032305 GTP-binding protein, middle domain EP550_02605 IPR016496 GTPase HflX EP550_02605 IPR035647 EF-G domain III/V-like EP550_02605 IPR042108 GTPase HflX, N-terminal domain superfamily EP550_02605 IPR025121 GTPase HflX, N-terminal EP550_02615 IPR001736 Phospholipase D/Transphosphatidylase EP550_02615 IPR030871 Cardiolipin synthase C EP550_02615 IPR025202 Phospholipase D-like domain EP550_02620 IPR029052 Metallo-dependent phosphatase-like EP550_02620 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type EP550_02620 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal EP550_02620 IPR006311 Twin-arginine translocation pathway, signal sequence EP550_02625 IPR006665 OmpA-like domain EP550_02625 IPR000498 Outer membrane protein OmpA-like, transmembrane domain EP550_02625 IPR036737 OmpA-like domain superfamily EP550_02625 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel EP550_02625 IPR002368 Outer membrane protein, OmpA EP550_02625 IPR006690 Outer membrane protein, OmpA-like, conserved site EP550_02625 IPR006664 Outer membrane protein, bacterial EP550_02635 IPR033417 Periplasmic sensor domain CHASE8 EP550_02635 IPR000160 GGDEF domain EP550_02635 IPR003660 HAMP domain EP550_02635 IPR029787 Nucleotide cyclase EP550_02680 IPR023753 FAD/NAD(P)-binding domain EP550_02680 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site EP550_02680 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EP550_02680 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I EP550_02680 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_02680 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily EP550_02680 IPR006258 Dihydrolipoamide dehydrogenase EP550_02690 IPR005939 Beta-lactamase hydrolase-like EP550_02690 IPR001279 Metallo-beta-lactamase EP550_02690 IPR029021 Protein-tyrosine phosphatase-like EP550_02690 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP550_02695 IPR029058 Alpha/Beta hydrolase fold EP550_02695 IPR000073 Alpha/beta hydrolase fold-1 EP550_02700 IPR036249 Thioredoxin-like superfamily EP550_02700 IPR017937 Thioredoxin, conserved site EP550_02700 IPR013766 Thioredoxin domain EP550_02700 IPR005746 Thioredoxin EP550_02705 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain EP550_02705 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase EP550_02705 IPR029069 HotDog domain superfamily EP550_02705 IPR006683 Thioesterase domain EP550_02715 IPR035571 UPF0234-like, C-terminal EP550_02715 IPR035570 UPF0234, N-terminal EP550_02715 IPR036183 YajQ-like superfamily EP550_02715 IPR007551 Protein of unknown function DUF520 EP550_02725 IPR006076 FAD dependent oxidoreductase EP550_02725 IPR008471 MnmC-like methyltransferase EP550_02725 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC EP550_02725 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal EP550_02725 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_02735 IPR011008 Dimeric alpha-beta barrel EP550_02735 IPR005545 YCII-related EP550_02740 IPR006008 Intracellular septation protein A EP550_02745 IPR004013 PHP domain EP550_02745 IPR003141 Polymerase/histidinol phosphatase, N-terminal EP550_02745 IPR016195 Polymerase/histidinol phosphatase-like EP550_02750 IPR021134 Bestrophin/UPF0187 EP550_02755 IPR001405 Uncharacterised protein family UPF0758 EP550_02755 IPR010994 RuvA domain 2-like EP550_02755 IPR025657 RadC-like JAB domain EP550_02755 IPR037518 MPN domain EP550_02760 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal EP550_02760 IPR035929 CoaB-like superfamily EP550_02760 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC EP550_02760 IPR003382 Flavoprotein EP550_02760 IPR036551 Flavin prenyltransferase-like EP550_02765 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site EP550_02765 IPR005665 Protein-export membrane protein SecF, bacterial EP550_02765 IPR022645 Protein-export membrane protein SecD/SecF, bacterial EP550_02765 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial EP550_02770 IPR027398 SecD export protein N-terminal TM domain EP550_02770 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site EP550_02770 IPR022645 Protein-export membrane protein SecD/SecF, bacterial EP550_02770 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial EP550_02770 IPR005791 Protein translocase subunit SecD EP550_02775 IPR003849 Preprotein translocase YajC EP550_02780 IPR036511 Queuine tRNA-ribosyltransferase-like EP550_02780 IPR002616 tRNA-guanine(15) transglycosylase-like EP550_02780 IPR004803 tRNA-guanine transglycosylase EP550_02795 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily EP550_02795 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA EP550_02795 IPR042118 QueA, domain 1 EP550_02795 IPR042119 QueA, domain 2 EP550_02805 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP550_02805 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP550_02805 IPR011649 KaiB domain EP550_02805 IPR023527 Adaptive-response sensory-kinase SasA EP550_02805 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP550_02805 IPR036249 Thioredoxin-like superfamily EP550_02805 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_02805 IPR003594 Histidine kinase/HSP90-like ATPase EP550_02805 IPR005467 Histidine kinase domain EP550_02810 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain EP550_02810 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase EP550_02810 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme EP550_02815 IPR018300 Aminotransferase, class IV, conserved site EP550_02815 IPR036038 Aminotransferase-like, PLP-dependent enzymes EP550_02815 IPR033939 Branched-chain aminotransferase EP550_02815 IPR001544 Aminotransferase class IV EP550_02815 IPR005785 Branched-chain amino acid aminotransferase I EP550_02830 IPR002509 NodB homology domain EP550_02830 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel EP550_02835 IPR029044 Nucleotide-diphospho-sugar transferases EP550_02835 IPR001173 Glycosyltransferase 2-like EP550_02840 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain EP550_02840 IPR001296 Glycosyl transferase, family 1 EP550_02865 IPR025668 Transposase DDE domain EP550_02880 IPR012340 Nucleic acid-binding, OB-fold EP550_02880 IPR029351 GAD domain EP550_02880 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type EP550_02880 IPR004115 GAD-like domain superfamily EP550_02880 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb EP550_02880 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) EP550_02880 IPR004524 Aspartate-tRNA ligase, type 1 EP550_02880 IPR006195 Aminoacyl-tRNA synthetase, class II EP550_02890 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_02890 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_02890 IPR039426 Vitamin B12 transporter BtuB-like EP550_02890 IPR012910 TonB-dependent receptor, plug domain EP550_02910 IPR020948 Phosphate-starvation-induced PsiE-like EP550_02910 IPR009315 Phosphate-starvation-induced PsiE EP550_02915 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_02915 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_02915 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_02915 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_02915 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_02915 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain EP550_02915 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_02920 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_02920 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain EP550_02920 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_02920 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_02920 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_02920 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_02920 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_02930 IPR005467 Histidine kinase domain EP550_02930 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP550_02930 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP550_02930 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_02930 IPR003594 Histidine kinase/HSP90-like ATPase EP550_02930 IPR003660 HAMP domain EP550_02930 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP550_02935 IPR011006 CheY-like superfamily EP550_02935 IPR001867 OmpR/PhoB-type DNA-binding domain EP550_02935 IPR016032 Signal transduction response regulator, C-terminal effector EP550_02935 IPR001789 Signal transduction response regulator, receiver domain EP550_02935 IPR039420 Transcriptional regulatory protein WalR-like EP550_02935 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_02940 IPR003846 Protein adenylyltransferase SelO EP550_02955 IPR030395 Glycerophosphodiester phosphodiesterase domain EP550_02955 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily EP550_02960 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type EP550_02960 IPR036451 Cobalamin adenosyltransferase-like superfamily EP550_02960 IPR016030 Cobalamin adenosyltransferase-like EP550_02965 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_02965 IPR039426 Vitamin B12 transporter BtuB-like EP550_02965 IPR010917 TonB-dependent receptor, conserved site EP550_02965 IPR010101 TonB-dependent vitamin B12 transporter BtuB EP550_02965 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_02965 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP550_02965 IPR012910 TonB-dependent receptor, plug domain EP550_02965 IPR010916 TonB box, conserved site EP550_02970 IPR013785 Aldolase-type TIM barrel EP550_02970 IPR011060 Ribulose-phosphate binding barrel EP550_02970 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) EP550_02975 IPR023026 Tryptophan synthase beta chain/beta chain-like EP550_02975 IPR006654 Tryptophan synthase, beta chain EP550_02975 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP550_02975 IPR001926 Pyridoxal-phosphate dependent enzyme EP550_02975 IPR006653 Tryptophan synthase, beta chain, conserved site EP550_03000 IPR013785 Aldolase-type TIM barrel EP550_03000 IPR018204 Tryptophan synthase, alpha chain, active site EP550_03000 IPR002028 Tryptophan synthase, alpha chain EP550_03000 IPR011060 Ribulose-phosphate binding barrel EP550_03005 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit EP550_03005 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal EP550_03005 IPR029045 ClpP/crotonase-like domain superfamily EP550_03005 IPR034733 Acetyl-CoA carboxylase EP550_03010 IPR013221 Mur ligase, central EP550_03010 IPR036615 Mur ligase, C-terminal domain superfamily EP550_03010 IPR036565 Mur-like, catalytic domain superfamily EP550_03010 IPR004101 Mur ligase, C-terminal EP550_03010 IPR001645 Folylpolyglutamate synthetase EP550_03010 IPR018109 Folylpolyglutamate synthetase, conserved site EP550_03025 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP550_03025 IPR001279 Metallo-beta-lactamase EP550_03030 IPR024706 Peroxiredoxin, AhpC-type EP550_03030 IPR019479 Peroxiredoxin, C-terminal EP550_03030 IPR013766 Thioredoxin domain EP550_03030 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant EP550_03030 IPR036249 Thioredoxin-like superfamily EP550_03030 IPR022915 Peroxiredoxin, TDXH subfamily EP550_03035 IPR000185 Protein translocase subunit SecA EP550_03035 IPR014018 SecA motor DEAD EP550_03035 IPR011130 SecA, preprotein cross-linking domain EP550_03035 IPR020937 SecA conserved site EP550_03035 IPR011116 SecA Wing/Scaffold EP550_03035 IPR036266 SecA, Wing/Scaffold superfamily EP550_03035 IPR011115 SecA DEAD-like, N-terminal EP550_03035 IPR036670 SecA, preprotein cross-linking domain superfamily EP550_03035 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_03035 IPR004027 SEC-C motif EP550_03045 IPR036259 MFS transporter superfamily EP550_03045 IPR011701 Major facilitator superfamily EP550_03045 IPR020846 Major facilitator superfamily domain EP550_03045 IPR004736 MFS transporter, metabolite:H symporter EP550_03045 IPR005828 Major facilitator, sugar transporter-like EP550_03045 IPR005829 Sugar transporter, conserved site EP550_03050 IPR004254 AdipoR/Haemolysin-III-related EP550_03050 IPR005744 Hly-III EP550_03075 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site EP550_03075 IPR012802 Fatty oxidation complex, alpha subunit FadJ EP550_03075 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal EP550_03075 IPR036291 NAD(P)-binding domain superfamily EP550_03075 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP550_03075 IPR029045 ClpP/crotonase-like domain superfamily EP550_03075 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding EP550_03075 IPR001753 Enoyl-CoA hydratase/isomerase EP550_03080 IPR020615 Thiolase, acyl-enzyme intermediate active site EP550_03080 IPR020613 Thiolase, conserved site EP550_03080 IPR020617 Thiolase, C-terminal EP550_03080 IPR020610 Thiolase, active site EP550_03080 IPR002155 Thiolase EP550_03080 IPR016039 Thiolase-like EP550_03080 IPR020616 Thiolase, N-terminal EP550_03085 IPR018062 HTH domain AraC-type, conserved site EP550_03085 IPR018060 DNA binding HTH domain, AraC-type EP550_03085 IPR037923 Transcription regulator HTH-like EP550_03085 IPR009057 Homeobox-like domain superfamily EP550_03085 IPR003313 AraC-type arabinose-binding/dimerisation domain EP550_03085 IPR020449 Transcription regulator HTH, AraC- type EP550_03090 IPR023606 CoA-transferase family III domain superfamily EP550_03090 IPR003673 CoA-transferase family III EP550_03095 IPR007049 Carbohydrate-selective porin OprB EP550_03095 IPR038673 Carbohydrate-selective porin OprB superfamily EP550_03100 IPR002372 Pyrrolo-quinoline quinone repeat EP550_03100 IPR017511 PQQ-dependent membrane bound dehydrogenase EP550_03100 IPR001479 Quinoprotein dehydrogenase, conserved site EP550_03100 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat EP550_03100 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily EP550_03105 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain EP550_03105 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily EP550_03105 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain EP550_03105 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site EP550_03115 IPR000390 Small multidrug resistance protein family EP550_03125 IPR020610 Thiolase, active site EP550_03125 IPR020617 Thiolase, C-terminal EP550_03125 IPR020616 Thiolase, N-terminal EP550_03125 IPR002155 Thiolase EP550_03125 IPR020615 Thiolase, acyl-enzyme intermediate active site EP550_03125 IPR016039 Thiolase-like EP550_03125 IPR020613 Thiolase, conserved site EP550_03135 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel EP550_03135 IPR006665 OmpA-like domain EP550_03135 IPR006664 Outer membrane protein, bacterial EP550_03135 IPR027385 Outer membrane protein beta-barrel domain EP550_03135 IPR036737 OmpA-like domain superfamily EP550_03140 IPR001233 tRNA-splicing ligase, RtcB EP550_03140 IPR036025 tRNA-splicing ligase RtcB-like superfamily EP550_03145 IPR004840 Amino acid permease, conserved site EP550_03145 IPR004841 Amino acid permease/ SLC12A domain EP550_03150 IPR023543 rRNA small subunit methyltransferase C EP550_03150 IPR013675 Methyltransferase small, N-terminal EP550_03150 IPR007848 Methyltransferase small domain EP550_03150 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_03150 IPR002052 DNA methylase, N-6 adenine-specific, conserved site EP550_03155 IPR006042 Xanthine/uracil permease EP550_03155 IPR006043 Xanthine/uracil/vitamin C permease EP550_03165 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L EP550_03165 IPR036019 Gated mechanosensitive channel EP550_03165 IPR019823 Large-conductance mechanosensitive channel, conserved site EP550_03165 IPR001185 Large-conductance mechanosensitive channel EP550_03175 IPR027304 Trigger factor/SurA domain superfamily EP550_03175 IPR023059 Foldase protein PrsA EP550_03175 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site EP550_03175 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type EP550_03180 IPR010663 Zinc finger, FPG/IleRS-type EP550_03180 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type EP550_03180 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding EP550_03180 IPR020629 Formamidopyrimidine-DNA glycosylase EP550_03180 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain EP550_03180 IPR035937 MutM-like, N-terminal EP550_03180 IPR010979 Ribosomal protein S13-like, H2TH EP550_03185 IPR003180 Methylpurine-DNA glycosylase EP550_03185 IPR036995 Methylpurine-DNA glycosylase superfamily EP550_03185 IPR011034 Formyl transferase-like, C-terminal domain superfamily EP550_03195 IPR013785 Aldolase-type TIM barrel EP550_03195 IPR023663 NADPH dehydrogenase EP550_03195 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal EP550_03210 IPR033954 Disulphide bond isomerase, DsbC/G EP550_03210 IPR017937 Thioredoxin, conserved site EP550_03210 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal EP550_03210 IPR036249 Thioredoxin-like superfamily EP550_03210 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily EP550_03210 IPR012336 Thioredoxin-like fold EP550_03215 IPR017703 YgfZ/GcvT conserved site EP550_03215 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal EP550_03215 IPR028896 Aminomethyltransferase-like EP550_03215 IPR006222 Aminomethyltransferase, folate-binding domain EP550_03225 IPR007438 Protein of unknown function DUF488 EP550_03230 IPR004624 PhnA protein EP550_03230 IPR013988 PhnA protein, C-terminal EP550_03230 IPR013987 PhnA protein, N-terminal EP550_03235 IPR010879 Domain of unknown function DUF1508 EP550_03235 IPR036913 YegP-like superfamily EP550_03240 IPR036621 Anticodon-binding domain superfamily EP550_03240 IPR004154 Anticodon-binding EP550_03240 IPR006195 Aminoacyl-tRNA synthetase, class II EP550_03240 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) EP550_03240 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 EP550_03240 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily EP550_03240 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type EP550_03240 IPR033730 Prokaryote proline-tRNA ligase core domain EP550_03240 IPR002316 Proline-tRNA ligase, class IIa EP550_03240 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain EP550_03245 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains EP550_03245 IPR001036 Acriflavin resistance protein EP550_03260 IPR001789 Signal transduction response regulator, receiver domain EP550_03260 IPR011006 CheY-like superfamily EP550_03265 IPR011006 CheY-like superfamily EP550_03265 IPR001789 Signal transduction response regulator, receiver domain EP550_03270 IPR002545 CheW-like domain EP550_03270 IPR036061 CheW-like domain superfamily EP550_03270 IPR039315 Chemotaxis protein CheW EP550_03275 IPR029095 NarX-like, N-terminal EP550_03275 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain EP550_03275 IPR003660 HAMP domain EP550_03275 IPR004090 Chemotaxis methyl-accepting receptor EP550_03290 IPR036264 Bacterial exopeptidase dimerisation domain EP550_03290 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria EP550_03290 IPR011650 Peptidase M20, dimerisation domain EP550_03290 IPR002933 Peptidase M20 EP550_03295 IPR012556 Entericidin A/B EP550_03305 IPR007401 Protein of unknown function DUF454 EP550_03310 IPR038063 L,D-transpeptidase catalytic domain-like EP550_03310 IPR041597 L,D-transpeptidase C-terminal domain EP550_03310 IPR005490 L,D-transpeptidase catalytic domain EP550_03335 IPR008254 Flavodoxin/nitric oxide synthase EP550_03335 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding EP550_03335 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria EP550_03335 IPR001094 Flavodoxin-like EP550_03335 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain EP550_03335 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase EP550_03335 IPR017927 FAD-binding domain, ferredoxin reductase-type EP550_03335 IPR029039 Flavoprotein-like superfamily EP550_03335 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP550_03335 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily EP550_03335 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP550_03335 IPR017938 Riboflavin synthase-like beta-barrel EP550_03345 IPR010020 Integral membrane protein, YccS/YhfK EP550_03345 IPR010019 Integral membrane protein, YccS EP550_03345 IPR032692 Integral membrane protein YccS, N-terminal EP550_03350 IPR004734 Multidrug resistance protein EP550_03350 IPR036259 MFS transporter superfamily EP550_03350 IPR020846 Major facilitator superfamily domain EP550_03350 IPR011701 Major facilitator superfamily EP550_03350 IPR004812 Drug resistance transporter Bcr/CmlA subfamily EP550_03355 IPR029479 Nitroreductase EP550_03355 IPR000415 Nitroreductase-like EP550_03370 IPR001463 Sodium:alanine symporter EP550_03375 IPR002641 Patatin-like phospholipase domain EP550_03375 IPR001423 Lysophospholipase patatin, conserved site EP550_03375 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase EP550_03380 IPR001926 Pyridoxal-phosphate dependent enzyme EP550_03380 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site EP550_03380 IPR005789 Threonine dehydratase, catabolic EP550_03380 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP550_03380 IPR002912 ACT domain EP550_03385 IPR036640 ABC transporter type 1, transmembrane domain superfamily EP550_03385 IPR009248 SbmA/BacA-like EP550_03415 IPR025668 Transposase DDE domain EP550_03425 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site EP550_03425 IPR018027 Asn/Gln amidotransferase EP550_03425 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 EP550_03425 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like EP550_03425 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 EP550_03425 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit EP550_03425 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E EP550_03425 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain EP550_03425 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic EP550_03430 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit EP550_03430 IPR036928 Amidase signature (AS) superfamily EP550_03430 IPR023631 Amidase signature domain EP550_03430 IPR020556 Amidase, conserved site EP550_03430 IPR000120 Amidase EP550_03435 IPR003837 Glu-tRNAGln amidotransferase C subunit EP550_03435 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C EP550_03440 IPR004753 Cell shape determining protein MreB EP550_03445 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 EP550_03445 IPR007221 Rod shape-determining protein MreC EP550_03445 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 EP550_03450 IPR026034 Cell shape-determining protein MreD, proteobacterial type EP550_03450 IPR007227 Cell shape-determining protein MreD EP550_03455 IPR029001 Inosine triphosphate pyrophosphatase-like EP550_03455 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein EP550_03460 IPR022967 RNA-binding domain, S1 EP550_03460 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G EP550_03460 IPR012340 Nucleic acid-binding, OB-fold EP550_03460 IPR004659 Ribonuclease E/G EP550_03460 IPR003029 S1 domain EP550_03470 IPR004255 O-acyltransferase, WSD1, N-terminal EP550_03470 IPR009721 O-acyltransferase WSD1, C-terminal EP550_03470 IPR014292 Acyltransferase, WS/DGAT/MGAT EP550_03475 IPR002500 Phosphoadenosine phosphosulphate reductase EP550_03475 IPR011798 Adenosine 5'-phosphosulphate reductase EP550_03475 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_03475 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase EP550_03480 IPR036412 HAD-like superfamily EP550_03480 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein EP550_03480 IPR023214 HAD superfamily EP550_03490 IPR003680 Flavodoxin-like fold EP550_03490 IPR029039 Flavoprotein-like superfamily EP550_03510 IPR003824 Undecaprenyl-diphosphatase UppP EP550_03515 IPR009057 Homeobox-like domain superfamily EP550_03515 IPR009594 Transcription regulator HTH, AraC, N-terminal EP550_03515 IPR018060 DNA binding HTH domain, AraC-type EP550_03520 IPR001227 Acyl transferase domain superfamily EP550_03520 IPR020807 Polyketide synthase, dehydratase domain EP550_03520 IPR036736 ACP-like superfamily EP550_03520 IPR014043 Acyl transferase EP550_03520 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase EP550_03520 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding EP550_03520 IPR014030 Beta-ketoacyl synthase, N-terminal EP550_03520 IPR011032 GroES-like superfamily EP550_03520 IPR032821 Ketoacyl-synthetase, C-terminal extension EP550_03520 IPR013154 Alcohol dehydrogenase, N-terminal EP550_03520 IPR018201 Beta-ketoacyl synthase, active site EP550_03520 IPR014031 Beta-ketoacyl synthase, C-terminal EP550_03520 IPR036347 Erythronolide synthase, docking domain superfamily EP550_03520 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain EP550_03520 IPR036291 NAD(P)-binding domain superfamily EP550_03520 IPR015083 Polyketide synthase, docking domain EP550_03520 IPR016039 Thiolase-like EP550_03520 IPR006162 Phosphopantetheine attachment site EP550_03520 IPR009081 Phosphopantetheine binding ACP domain EP550_03520 IPR042104 Polyketide synthase, dehydratase domain superfamily EP550_03520 IPR015357 Erythronolide synthase, docking EP550_03520 IPR013968 Polyketide synthase, ketoreductase domain EP550_03520 IPR020843 Polyketide synthase, enoylreductase domain EP550_03520 IPR020806 Polyketide synthase, phosphopantetheine-binding domain EP550_03525 IPR017283 Protein/nucleic acid deglycase HchA EP550_03525 IPR002818 DJ-1/PfpI EP550_03525 IPR029062 Class I glutamine amidotransferase-like EP550_03535 IPR004841 Amino acid permease/ SLC12A domain EP550_03535 IPR004840 Amino acid permease, conserved site EP550_03540 IPR012709 2-methyl-aconitate isomerase PrpF EP550_03540 IPR007400 PrpF protein EP550_03545 IPR033749 Polyprenyl synthetase, conserved site EP550_03545 IPR000092 Polyprenyl synthetase EP550_03545 IPR008949 Isoprenoid synthase domain superfamily EP550_03550 IPR038056 YjbR-like superfamily EP550_03550 IPR007351 Uncharacterised protein YjbR EP550_03555 IPR001972 Stomatin family EP550_03555 IPR036013 Band 7/SPFH domain superfamily EP550_03555 IPR018080 Band 7/stomatin-like, conserved site EP550_03555 IPR001107 Band 7 domain EP550_03565 IPR002641 Patatin-like phospholipase domain EP550_03565 IPR001423 Lysophospholipase patatin, conserved site EP550_03565 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase EP550_03585 IPR000917 Sulfatase, N-terminal EP550_03585 IPR040423 Phosphoethanolamine transferase EP550_03585 IPR012549 Phosphoethanolamine transferase, N-terminal EP550_03585 IPR017850 Alkaline-phosphatase-like, core domain superfamily EP550_03590 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_03590 IPR039420 Transcriptional regulatory protein WalR-like EP550_03590 IPR011006 CheY-like superfamily EP550_03590 IPR001789 Signal transduction response regulator, receiver domain EP550_03590 IPR001867 OmpR/PhoB-type DNA-binding domain EP550_03595 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP550_03595 IPR013727 Two-component sensor kinase, N-terminal EP550_03595 IPR003660 HAMP domain EP550_03595 IPR003594 Histidine kinase/HSP90-like ATPase EP550_03595 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_03595 IPR005467 Histidine kinase domain EP550_03595 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP550_03595 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP550_03605 IPR018047 Ammonium transporter, conserved site EP550_03605 IPR024041 Ammonium transporter AmtB-like domain EP550_03605 IPR001905 Ammonium transporter EP550_03605 IPR029020 Ammonium/urea transporter EP550_03615 IPR005119 LysR, substrate-binding EP550_03615 IPR036390 Winged helix DNA-binding domain superfamily EP550_03615 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_03615 IPR000847 Transcription regulator HTH, LysR EP550_03635 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site EP550_03635 IPR002300 Aminoacyl-tRNA synthetase, class Ia EP550_03635 IPR033705 Valyl tRNA synthetase, anticodon-binding domain EP550_03635 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding EP550_03635 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_03635 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm EP550_03635 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding EP550_03635 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain EP550_03635 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm EP550_03635 IPR002303 Valine-tRNA ligase EP550_03635 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily EP550_03645 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_03645 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_03645 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase EP550_03645 IPR036291 NAD(P)-binding domain superfamily EP550_03655 IPR002765 Uncharacterised protein family UPF0145 EP550_03655 IPR035439 UPF0145 domain superfamily EP550_03660 IPR035439 UPF0145 domain superfamily EP550_03660 IPR002765 Uncharacterised protein family UPF0145 EP550_03665 IPR003423 Outer membrane efflux protein EP550_03665 IPR010131 RND efflux system, outer membrane lipoprotein, NodT EP550_03670 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 EP550_03670 IPR001036 Acriflavin resistance protein EP550_03670 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains EP550_03675 IPR006143 RND efflux pump, membrane fusion protein EP550_03675 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain EP550_03680 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase EP550_03680 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily EP550_03690 IPR033749 Polyprenyl synthetase, conserved site EP550_03690 IPR008949 Isoprenoid synthase domain superfamily EP550_03690 IPR000092 Polyprenyl synthetase EP550_03700 IPR036164 L21-like superfamily EP550_03700 IPR028909 Ribosomal protein L21-like EP550_03700 IPR001787 Ribosomal protein L21 EP550_03700 IPR018258 Ribosomal protein L21, conserved site EP550_03705 IPR018261 Ribosomal protein L27, conserved site EP550_03705 IPR001684 Ribosomal protein L27 EP550_03710 IPR004564 Outer membrane lipoprotein carrier protein LolA-like EP550_03710 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria EP550_03710 IPR029046 Lipoprotein localisation LolA/LolB/LppX EP550_03720 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm EP550_03720 IPR033729 Serine-tRNA ligase catalytic core domain EP550_03720 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) EP550_03720 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily EP550_03720 IPR015866 Serine-tRNA synthetase, type1, N-terminal EP550_03720 IPR002317 Serine-tRNA ligase, type1 EP550_03720 IPR006195 Aminoacyl-tRNA synthetase, class II EP550_03725 IPR035996 Tetrapyrrole methylase superfamily EP550_03725 IPR014776 Tetrapyrrole methylase, subdomain 2 EP550_03725 IPR006366 Uroporphyrin-III C-methyltransferase EP550_03725 IPR012409 Sirohaem synthase EP550_03725 IPR028281 Siroheme synthase, central domain EP550_03725 IPR037115 Sirohaem synthase, dimerisation domain superfamily EP550_03725 IPR036291 NAD(P)-binding domain superfamily EP550_03725 IPR019478 Sirohaem synthase, dimerisation domain EP550_03725 IPR014777 Tetrapyrrole methylase, subdomain 1 EP550_03725 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site EP550_03725 IPR006367 Sirohaem synthase, N-terminal EP550_03725 IPR000878 Tetrapyrrole methylase EP550_03730 IPR029028 Alpha/beta knot methyltransferases EP550_03730 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase EP550_03730 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal EP550_03730 IPR001537 tRNA/rRNA methyltransferase, SpoU type EP550_03735 IPR036390 Winged helix DNA-binding domain superfamily EP550_03735 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_03735 IPR002577 Helix-turn-helix, HxlR type EP550_03740 IPR008254 Flavodoxin/nitric oxide synthase EP550_03740 IPR029039 Flavoprotein-like superfamily EP550_03740 IPR005025 NADPH-dependent FMN reductase-like EP550_03745 IPR002293 Amino acid/polyamine transporter I EP550_03750 IPR018211 Alcohol dehydrogenase, iron-type, conserved site EP550_03750 IPR039697 Iron-type alcohol dehydrogenase-like EP550_03750 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA EP550_03760 IPR000544 Octanoyltransferase EP550_03760 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain EP550_03760 IPR020605 Octanoyltransferase, conserved site EP550_03765 IPR007454 Uncharacterised protein family UPF0250 EP550_03765 IPR027471 YbeD-like domain superfamily EP550_03770 IPR013324 RNA polymerase sigma factor, region 3/4-like EP550_03770 IPR013325 RNA polymerase sigma factor, region 2 EP550_03770 IPR042189 Sigma-70 factor, region 1.1 superfamily EP550_03770 IPR007127 RNA polymerase sigma factor 70, region 1.1 EP550_03770 IPR007631 RNA polymerase sigma factor 70, non-essential domain EP550_03770 IPR007630 RNA polymerase sigma-70 region 4 EP550_03770 IPR028630 RNA polymerase sigma factor RpoD EP550_03770 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_03770 IPR007627 RNA polymerase sigma-70 region 2 EP550_03770 IPR012760 RNA polymerase sigma factor RpoD, C-terminal EP550_03770 IPR007624 RNA polymerase sigma-70 region 3 EP550_03770 IPR009042 RNA polymerase sigma-70 region 1.2 EP550_03770 IPR000943 RNA polymerase sigma-70 EP550_03770 IPR014284 RNA polymerase sigma-70 like domain EP550_03800 IPR016142 Citrate synthase-like, large alpha subdomain EP550_03800 IPR010953 Citrate synthase, type I EP550_03800 IPR036969 Citrate synthase superfamily EP550_03800 IPR016143 Citrate synthase-like, small alpha subdomain EP550_03800 IPR002020 Citrate synthase EP550_03800 IPR019810 Citrate synthase active site EP550_03800 IPR024176 Citrate synthase, bacterial-type EP550_03805 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit EP550_03805 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit EP550_03805 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site EP550_03805 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit EP550_03810 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit EP550_03810 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor EP550_03810 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit EP550_03815 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit EP550_03815 IPR011281 Succinate dehydrogenase, flavoprotein subunit EP550_03815 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_03815 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal EP550_03815 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily EP550_03815 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site EP550_03815 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain EP550_03815 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily EP550_03820 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP550_03820 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal EP550_03820 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein EP550_03820 IPR009051 Alpha-helical ferredoxin EP550_03820 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site EP550_03820 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain EP550_03820 IPR036010 2Fe-2S ferredoxin-like superfamily EP550_03820 IPR012675 Beta-grasp domain superfamily EP550_03835 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily EP550_03835 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal EP550_03835 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain EP550_03835 IPR005475 Transketolase-like, pyrimidine-binding domain EP550_03835 IPR029061 Thiamin diphosphate-binding fold EP550_03835 IPR011603 2-oxoglutarate dehydrogenase E1 component EP550_03835 IPR001017 Dehydrogenase, E1 component EP550_03840 IPR000089 Biotin/lipoyl attachment EP550_03840 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily EP550_03840 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site EP550_03840 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain EP550_03840 IPR006255 Dihydrolipoamide succinyltransferase EP550_03840 IPR036625 E3-binding domain superfamily EP550_03840 IPR004167 Peripheral subunit-binding domain EP550_03840 IPR011053 Single hybrid motif EP550_03845 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily EP550_03845 IPR023753 FAD/NAD(P)-binding domain EP550_03845 IPR006258 Dihydrolipoamide dehydrogenase EP550_03845 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_03845 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EP550_03845 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I EP550_03845 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site EP550_03850 IPR005809 Succinate--CoA synthetase, beta subunit EP550_03850 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type EP550_03850 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site EP550_03850 IPR011761 ATP-grasp fold EP550_03850 IPR005811 ATP-citrate lyase/succinyl-CoA ligase EP550_03850 IPR016102 Succinyl-CoA synthetase-like EP550_03850 IPR013815 ATP-grasp fold, subdomain 1 EP550_03855 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site EP550_03855 IPR003781 CoA-binding EP550_03855 IPR005810 Succinyl-CoA ligase, alpha subunit EP550_03855 IPR005811 ATP-citrate lyase/succinyl-CoA ligase EP550_03855 IPR036291 NAD(P)-binding domain superfamily EP550_03855 IPR016102 Succinyl-CoA synthetase-like EP550_03855 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site EP550_03860 IPR002306 Tryptophan-tRNA ligase EP550_03860 IPR024109 Tryptophan-tRNA ligase, bacterial-type EP550_03860 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_03860 IPR002305 Aminoacyl-tRNA synthetase, class Ic EP550_03860 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site EP550_03865 IPR008526 Inner membrane protein YedI EP550_03870 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative EP550_03875 IPR018422 Cation/H+ exchanger, CPA1 family EP550_03875 IPR038770 Sodium/solute symporter superfamily EP550_03875 IPR006153 Cation/H+ exchanger EP550_03945 IPR019079 Capsule synthesis protein, CapA EP550_03945 IPR029052 Metallo-dependent phosphatase-like EP550_03955 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding EP550_03955 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain EP550_03955 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_03960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_03960 IPR006015 Universal stress protein A family EP550_03960 IPR006016 UspA EP550_03965 IPR018357 Hexapeptide transferase, conserved site EP550_03965 IPR001451 Hexapeptide repeat EP550_03965 IPR011004 Trimeric LpxA-like superfamily EP550_03970 IPR028624 Transcription elongation factor GreA/GreB EP550_03970 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal EP550_03970 IPR023459 Transcription elongation factor GreA/GreB family EP550_03970 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal EP550_03970 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily EP550_03970 IPR006359 Transcription elongation factor GreA EP550_03970 IPR018151 Transcription elongation factor, GreA/GreB, conserved site EP550_03970 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily EP550_03975 IPR016185 Pre-ATP-grasp domain superfamily EP550_03975 IPR036914 Methylglyoxal synthase-like domain superfamily EP550_03975 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain EP550_03975 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain EP550_03975 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain EP550_03975 IPR011761 ATP-grasp fold EP550_03975 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain EP550_03975 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily EP550_03975 IPR011607 Methylglyoxal synthase-like domain EP550_03975 IPR006275 Carbamoyl-phosphate synthase, large subunit EP550_03980 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily EP550_03980 IPR006274 Carbamoyl-phosphate synthase, small subunit EP550_03980 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain EP550_03980 IPR017926 Glutamine amidotransferase EP550_03980 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain EP550_03980 IPR029062 Class I glutamine amidotransferase-like EP550_03995 IPR001890 RNA-binding, CRM domain EP550_03995 IPR017924 RNA-binding protein YhbY EP550_03995 IPR035920 YhbY-like superfamily EP550_04000 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_04000 IPR002877 Ribosomal RNA methyltransferase FtsJ domain EP550_04000 IPR015507 Ribosomal RNA large subunit methyltransferase E EP550_04005 IPR003960 ATPase, AAA-type, conserved site EP550_04005 IPR003593 AAA+ ATPase domain EP550_04005 IPR000642 Peptidase M41 EP550_04005 IPR041569 AAA ATPase, AAA+ lid domain EP550_04005 IPR011546 Peptidase M41, FtsH extracellular EP550_04005 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_04005 IPR005936 Peptidase, FtsH EP550_04005 IPR037219 Peptidase M41-like EP550_04005 IPR003959 ATPase, AAA-type, core EP550_04010 IPR000489 Pterin-binding domain EP550_04010 IPR011005 Dihydropteroate synthase-like EP550_04010 IPR006390 Dihydropteroate synthase EP550_04035 IPR018946 Alkaline phosphatase D-related EP550_04035 IPR038607 PhoD-like superfamily EP550_04035 IPR032093 Phospholipase D, N-terminal EP550_04035 IPR008963 Purple acid phosphatase-like, N-terminal EP550_04035 IPR006311 Twin-arginine translocation pathway, signal sequence EP550_04050 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EP550_04050 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site EP550_04050 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EP550_04050 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase EP550_04050 IPR036291 NAD(P)-binding domain superfamily EP550_04055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_04055 IPR004498 Ribosomal protein L11 methyltransferase EP550_04065 IPR004736 MFS transporter, metabolite:H symporter EP550_04065 IPR020846 Major facilitator superfamily domain EP550_04065 IPR005828 Major facilitator, sugar transporter-like EP550_04065 IPR036259 MFS transporter superfamily EP550_04065 IPR005829 Sugar transporter, conserved site EP550_04070 IPR000577 Carbohydrate kinase, FGGY EP550_04070 IPR018485 Carbohydrate kinase, FGGY, C-terminal EP550_04070 IPR018483 Carbohydrate kinase, FGGY, conserved site EP550_04070 IPR005999 Glycerol kinase EP550_04070 IPR018484 Carbohydrate kinase, FGGY, N-terminal EP550_04075 IPR006076 FAD dependent oxidoreductase EP550_04075 IPR031656 Alpha-glycerophosphate oxidase, C-terminal EP550_04075 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_04075 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily EP550_04075 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase EP550_04080 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal EP550_04080 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising EP550_04080 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site EP550_04080 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal EP550_04080 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal EP550_04080 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain EP550_04085 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily EP550_04085 IPR001206 Diacylglycerol kinase, catalytic domain EP550_04085 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal EP550_04085 IPR005218 Diacylglycerol/lipid kinase EP550_04090 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type EP550_04090 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA EP550_04090 IPR042281 GpdQ, beta-strand dimerisation domain EP550_04090 IPR042283 GpdQ, catalytic alpha/beta sandwich domain EP550_04100 IPR011032 GroES-like superfamily EP550_04100 IPR020818 GroES chaperonin family EP550_04100 IPR037124 GroES chaperonin superfamily EP550_04100 IPR018369 Chaperonin GroES, conserved site EP550_04105 IPR027413 GroEL-like equatorial domain superfamily EP550_04105 IPR018370 Chaperonin Cpn60, conserved site EP550_04105 IPR027410 TCP-1-like chaperonin intermediate domain superfamily EP550_04105 IPR027409 GroEL-like apical domain superfamily EP550_04105 IPR002423 Chaperonin Cpn60/TCP-1 family EP550_04105 IPR001844 Chaperonin Cpn60 EP550_04110 IPR036945 Diacylglycerol kinase (DAGK) superfamily EP550_04110 IPR000829 DAGK family EP550_04110 IPR033718 Diacylglycerol kinase, prokaryotic EP550_04115 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP550_04115 IPR001279 Metallo-beta-lactamase EP550_04120 IPR030395 Glycerophosphodiester phosphodiesterase domain EP550_04120 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily EP550_04125 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains EP550_04125 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 EP550_04125 IPR001036 Acriflavin resistance protein EP550_04135 IPR001915 Peptidase M48 EP550_04135 IPR022919 Peptidase M48, protease HtpX, putative EP550_04140 IPR000189 Prokaryotic transglycosylase, active site EP550_04140 IPR008258 Transglycosylase SLT domain 1 EP550_04140 IPR023346 Lysozyme-like domain superfamily EP550_04150 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type EP550_04150 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase EP550_04150 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal EP550_04150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_04160 IPR008258 Transglycosylase SLT domain 1 EP550_04160 IPR000189 Prokaryotic transglycosylase, active site EP550_04160 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP550_04160 IPR023703 Membrane-bound lytic murein transglycosylase F EP550_04160 IPR023346 Lysozyme-like domain superfamily EP550_04165 IPR023459 Transcription elongation factor GreA/GreB family EP550_04165 IPR006358 Transcription elongation factor GreB EP550_04165 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily EP550_04165 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal EP550_04165 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal EP550_04165 IPR028624 Transcription elongation factor GreA/GreB EP550_04165 IPR018151 Transcription elongation factor, GreA/GreB, conserved site EP550_04165 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily EP550_04180 IPR036736 ACP-like superfamily EP550_04180 IPR020802 Polyketide synthase, thioesterase domain EP550_04180 IPR020806 Polyketide synthase, phosphopantetheine-binding domain EP550_04180 IPR001242 Condensation domain EP550_04180 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily EP550_04180 IPR042099 AMP-dependent synthetase-like superfamily EP550_04180 IPR000873 AMP-dependent synthetase/ligase EP550_04180 IPR020845 AMP-binding, conserved site EP550_04180 IPR025110 AMP-binding enzyme, C-terminal domain EP550_04180 IPR029058 Alpha/Beta hydrolase fold EP550_04180 IPR001031 Thioesterase EP550_04180 IPR010071 Amino acid adenylation domain EP550_04180 IPR009081 Phosphopantetheine binding ACP domain EP550_04210 IPR000415 Nitroreductase-like EP550_04210 IPR029479 Nitroreductase EP550_04215 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_04215 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_04215 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase EP550_04215 IPR036291 NAD(P)-binding domain superfamily EP550_04225 IPR018193 Glycerate kinase, flavodoxin-like fold EP550_04225 IPR004381 Glycerate kinase EP550_04225 IPR018197 Glycerate kinase, restriction-enzyme-like fold EP550_04225 IPR036129 Glycerate kinase superfamily EP550_04230 IPR037951 YdeP-like, MopB domain EP550_04230 IPR009010 Aspartate decarboxylase-like domain superfamily EP550_04230 IPR010046 Oxidoreductase alpha (molybdopterin) subunit EP550_04230 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain EP550_04230 IPR006656 Molybdopterin oxidoreductase EP550_04235 IPR003786 Sulfur carrier protein FdhD EP550_04235 IPR016193 Cytidine deaminase-like EP550_04240 IPR010652 Domain of unknown function DUF1232 EP550_04245 IPR036291 NAD(P)-binding domain superfamily EP550_04245 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 EP550_04245 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EP550_04245 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain EP550_04245 IPR038251 PdxB, dimerisation domain superfamily EP550_04245 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain EP550_04245 IPR020921 Erythronate-4-phosphate dehydrogenase EP550_04250 IPR006195 Aminoacyl-tRNA synthetase, class II EP550_04250 IPR004525 Elongation factor P--(R)-beta-lysine ligase EP550_04250 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal EP550_04250 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) EP550_04260 IPR003593 AAA+ ATPase domain EP550_04260 IPR004504 DNA repair protein RadA EP550_04260 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_04260 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain EP550_04260 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP550_04260 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_04260 IPR041166 LapB, rubredoxin metal binding domain EP550_04265 IPR004840 Amino acid permease, conserved site EP550_04265 IPR004841 Amino acid permease/ SLC12A domain EP550_04275 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site EP550_04275 IPR000183 Ornithine/DAP/Arg decarboxylase EP550_04275 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal EP550_04275 IPR029066 PLP-binding barrel EP550_04275 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal EP550_04275 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal EP550_04275 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site EP550_04275 IPR002986 Diaminopimelate decarboxylase, LysA EP550_04280 IPR001653 Diaminopimelate epimerase, DapF EP550_04280 IPR018510 Diaminopimelate epimerase, active site EP550_04285 IPR004778 Homoserine/Threonine efflux protein EP550_04285 IPR001123 Amino acid exporter protein, LeuE-type EP550_04290 IPR013762 Integrase-like, catalytic domain superfamily EP550_04290 IPR011010 DNA breaking-rejoining enzyme, catalytic core EP550_04290 IPR011931 Tyrosine recombinase XerC EP550_04290 IPR023009 Tyrosine recombinase XerC/XerD EP550_04290 IPR002104 Integrase, catalytic domain EP550_04290 IPR010998 Integrase/recombinase, N-terminal EP550_04290 IPR004107 Integrase, SAM-like, N-terminal EP550_04295 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_04295 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal EP550_04295 IPR012255 Electron transfer flavoprotein, beta subunit EP550_04295 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site EP550_04295 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal EP550_04300 IPR029035 DHS-like NAD/FAD-binding domain superfamily EP550_04300 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal EP550_04300 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_04300 IPR001308 Electron transfer flavoprotein alpha subunit/FixB EP550_04300 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal EP550_04300 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site EP550_04300 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal EP550_04305 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal EP550_04305 IPR013760 DNA topoisomerase, type IIA-like domain superfamily EP550_04305 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal EP550_04305 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat EP550_04305 IPR005743 DNA gyrase, subunit A EP550_04305 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily EP550_04305 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta EP550_04320 IPR029044 Nucleotide-diphospho-sugar transferases EP550_04320 IPR001173 Glycosyltransferase 2-like EP550_04340 IPR039562 Membrane fusion protein, biotin-lipoyl like domain EP550_04350 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_04350 IPR000192 Aminotransferase class V domain EP550_04350 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site EP550_04350 IPR022278 Phosphoserine aminotransferase EP550_04350 IPR015424 Pyridoxal phosphate-dependent transferase EP550_04350 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_04360 IPR003791 Protein of unknown function UPF0178 EP550_04370 IPR003838 ABC transporter permease protein domain EP550_04370 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E EP550_04370 IPR025857 MacB-like periplasmic core domain EP550_04375 IPR003439 ABC transporter-like EP550_04375 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_04375 IPR015854 ABC transporter, lipoprotein release, LolD EP550_04375 IPR017871 ABC transporter, conserved site EP550_04375 IPR003593 AAA+ ATPase domain EP550_04380 IPR001279 Metallo-beta-lactamase EP550_04380 IPR025405 Domain of unknown function DUF4131 EP550_04380 IPR004477 ComEC/Rec2-related protein EP550_04380 IPR035681 ComA-like, MBL domain EP550_04380 IPR004797 Competence protein ComEC/Rec2 EP550_04380 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP550_04390 IPR029045 ClpP/crotonase-like domain superfamily EP550_04390 IPR023171 Na/H antiporter domain superfamily EP550_04390 IPR002142 Peptidase S49 EP550_04390 IPR004670 Na+/H+ antiporter NhaA EP550_04395 IPR000073 Alpha/beta hydrolase fold-1 EP550_04395 IPR029058 Alpha/Beta hydrolase fold EP550_04400 IPR002376 Formyl transferase, N-terminal EP550_04400 IPR036477 Formyl transferase, N-terminal domain superfamily EP550_04400 IPR004607 Phosphoribosylglycinamide formyltransferase EP550_04400 IPR001555 Phosphoribosylglycinamide formyltransferase, active site EP550_04405 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase EP550_04405 IPR036921 PurM-like, N-terminal domain superfamily EP550_04405 IPR016188 PurM-like, N-terminal domain EP550_04405 IPR036676 PurM-like, C-terminal domain superfamily EP550_04405 IPR010918 PurM-like, C-terminal domain EP550_04410 IPR002549 Transmembrane protein TqsA-like EP550_04415 IPR001957 Chromosomal replication control, initiator DnaA EP550_04415 IPR018312 Chromosomal replication control, initiator DnaA, conserved site EP550_04415 IPR020591 Chromosomal replication control, initiator DnaA-like EP550_04415 IPR010921 Trp repressor/replication initiator EP550_04415 IPR013159 Chromosomal replication initiator, DnaA C-terminal EP550_04415 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_04415 IPR038454 DnaA, N-terminal domain superfamily EP550_04415 IPR024633 DnaA N-terminal domain EP550_04415 IPR003593 AAA+ ATPase domain EP550_04415 IPR013317 Chromosomal replication initiator protein DnaA EP550_04455 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal EP550_04455 IPR013123 RNA 2-O ribose methyltransferase, substrate binding EP550_04455 IPR001537 tRNA/rRNA methyltransferase, SpoU type EP550_04455 IPR029064 50S ribosomal protein L30e-like EP550_04455 IPR029028 Alpha/beta knot methyltransferases EP550_04460 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal EP550_04460 IPR000146 Fructose-1,6-bisphosphatase class 1 EP550_04460 IPR028343 Fructose-1,6-bisphosphatase EP550_04470 IPR036737 OmpA-like domain superfamily EP550_04470 IPR006664 Outer membrane protein, bacterial EP550_04470 IPR006690 Outer membrane protein, OmpA-like, conserved site EP550_04470 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal EP550_04470 IPR006665 OmpA-like domain EP550_04470 IPR039001 Peptidoglycan-associated lipoprotein EP550_04475 IPR011659 WD40-like Beta Propeller EP550_04475 IPR011042 Six-bladed beta-propeller, TolB-like EP550_04475 IPR007195 TolB, N-terminal EP550_04475 IPR036752 TolB, N-terminal domain superfamily EP550_04475 IPR014167 Tol-Pal system protein TolB EP550_04485 IPR003400 Biopolymer transport protein ExbD/TolR EP550_04485 IPR014168 Tol-Pal system protein TolR EP550_04490 IPR014163 Tol-Pal system, TolQ EP550_04490 IPR002898 MotA/TolQ/ExbB proton channel EP550_04495 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site EP550_04495 IPR029069 HotDog domain superfamily EP550_04495 IPR006683 Thioesterase domain EP550_04495 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase EP550_04495 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family EP550_04500 IPR002933 Peptidase M20 EP550_04500 IPR011650 Peptidase M20, dimerisation domain EP550_04500 IPR036264 Bacterial exopeptidase dimerisation domain EP550_04500 IPR017439 Amidohydrolase EP550_04505 IPR004605 DNA helicase, Holliday junction RuvB-type EP550_04505 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_04505 IPR008824 RuvB-like P-loop domain EP550_04505 IPR008823 RuvB C-terminal winged helix domain EP550_04505 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_04505 IPR041445 RuvB, AAA lid domain EP550_04505 IPR036390 Winged helix DNA-binding domain superfamily EP550_04505 IPR003593 AAA+ ATPase domain EP550_04510 IPR012340 Nucleic acid-binding, OB-fold EP550_04510 IPR010994 RuvA domain 2-like EP550_04510 IPR000085 Bacterial DNA recombination protein RuvA EP550_04510 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 EP550_04510 IPR036267 RuvA, C-terminal domain superfamily EP550_04510 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial EP550_04510 IPR011114 Holliday junction DNA helicase RuvA, C-terminal EP550_04515 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily EP550_04515 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal EP550_04515 IPR006261 dNTP triphosphohydrolase EP550_04515 IPR023024 dNTP triphosphohydrolase, type 3 EP550_04515 IPR003607 HD/PDEase domain EP550_04515 IPR006674 HD domain EP550_04520 IPR029062 Class I glutamine amidotransferase-like EP550_04520 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal EP550_04520 IPR010073 Phosphoribosylformylglycinamidine synthase PurL EP550_04520 IPR017926 Glutamine amidotransferase EP550_04520 IPR010918 PurM-like, C-terminal domain EP550_04520 IPR036676 PurM-like, C-terminal domain superfamily EP550_04520 IPR036921 PurM-like, N-terminal domain superfamily EP550_04520 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily EP550_04520 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain EP550_04525 IPR004812 Drug resistance transporter Bcr/CmlA subfamily EP550_04525 IPR020846 Major facilitator superfamily domain EP550_04525 IPR011701 Major facilitator superfamily EP550_04525 IPR036259 MFS transporter superfamily EP550_04530 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal EP550_04530 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria EP550_04530 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily EP550_04530 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 EP550_04535 IPR014748 Enoyl-CoA hydratase, C-terminal EP550_04535 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB EP550_04535 IPR001753 Enoyl-CoA hydratase/isomerase EP550_04535 IPR029045 ClpP/crotonase-like domain superfamily EP550_04540 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain EP550_04540 IPR020084 NUDIX hydrolase, conserved site EP550_04540 IPR004821 Cytidyltransferase-like domain EP550_04540 IPR000086 NUDIX hydrolase domain EP550_04540 IPR015797 NUDIX hydrolase-like domain superfamily EP550_04540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_04550 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant EP550_04550 IPR013766 Thioredoxin domain EP550_04550 IPR036249 Thioredoxin-like superfamily EP550_04565 IPR018317 Queuosine biosynthesis protein QueC EP550_04565 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_04570 IPR013785 Aldolase-type TIM barrel EP550_04570 IPR024924 7-carboxy-7-deazaguanine synthase-like EP550_04570 IPR007197 Radical SAM EP550_04575 IPR011004 Trimeric LpxA-like superfamily EP550_04575 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family EP550_04575 IPR001451 Hexapeptide repeat EP550_04575 IPR018357 Hexapeptide transferase, conserved site EP550_04575 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 EP550_04575 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily EP550_04585 IPR036390 Winged helix DNA-binding domain superfamily EP550_04585 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain EP550_04585 IPR005119 LysR, substrate-binding EP550_04585 IPR000847 Transcription regulator HTH, LysR EP550_04585 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_04590 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_04590 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal EP550_04590 IPR017871 ABC transporter, conserved site EP550_04590 IPR024765 TOBE-like domain EP550_04590 IPR005666 Sulphate transport system permease protein 1 EP550_04590 IPR008995 Molybdate/tungstate binding, C-terminal EP550_04590 IPR003593 AAA+ ATPase domain EP550_04590 IPR003439 ABC transporter-like EP550_04595 IPR011866 Sulphate ABC transporter, permease protein CysW EP550_04595 IPR035906 MetI-like superfamily EP550_04595 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_04595 IPR005667 Sulphate ABC transporter permease protein 2 EP550_04600 IPR011865 Sulphate ABC transporter, permease protein CysT EP550_04600 IPR035906 MetI-like superfamily EP550_04600 IPR005667 Sulphate ABC transporter permease protein 2 EP550_04600 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_04610 IPR034408 Sulphate/thiosulphate-binding site EP550_04610 IPR005669 Thiosulphate/Sulfate-binding protein EP550_04610 IPR000957 Sulphate/thiosulphate-binding, conserved site EP550_04615 IPR018300 Aminotransferase, class IV, conserved site EP550_04615 IPR001544 Aminotransferase class IV EP550_04615 IPR017824 Aminodeoxychorismate lyase, class IV EP550_04615 IPR036038 Aminotransferase-like, PLP-dependent enzymes EP550_04620 IPR003770 Endolytic murein transglycosylase EP550_04625 IPR039430 Thymidylate kinase-like domain EP550_04625 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_04625 IPR018094 Thymidylate kinase EP550_04635 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal EP550_04635 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain EP550_04635 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_04635 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily EP550_04635 IPR005288 L-aspartate oxidase EP550_04635 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily EP550_04640 IPR001478 PDZ domain EP550_04640 IPR009003 Peptidase S1, PA clan EP550_04640 IPR011782 Peptidase S1C, Do EP550_04640 IPR036034 PDZ superfamily EP550_04640 IPR001940 Peptidase S1C EP550_04650 IPR035647 EF-G domain III/V-like EP550_04650 IPR000640 Elongation factor EFG, domain V-like EP550_04650 IPR038363 LepA, C-terminal domain superfamily EP550_04650 IPR006297 Elongation factor 4 EP550_04650 IPR013842 GTP-binding protein LepA, C-terminal EP550_04650 IPR035654 Elongation factor 4, domain IV EP550_04650 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_04650 IPR005225 Small GTP-binding protein domain EP550_04650 IPR000795 Transcription factor, GTP-binding domain EP550_04650 IPR031157 Tr-type G domain, conserved site EP550_04650 IPR004161 Translation elongation factor EFTu-like, domain 2 EP550_04655 IPR019756 Peptidase S26A, signal peptidase I, serine active site EP550_04655 IPR000223 Peptidase S26A, signal peptidase I EP550_04655 IPR019757 Peptidase S26A, signal peptidase I, lysine active site EP550_04655 IPR036286 LexA/Signal peptidase-like superfamily EP550_04655 IPR019758 Peptidase S26A, signal peptidase I, conserved site EP550_04655 IPR019533 Peptidase S26 EP550_04665 IPR000999 Ribonuclease III domain EP550_04665 IPR014720 Double-stranded RNA-binding domain EP550_04665 IPR011907 Ribonuclease III EP550_04665 IPR036389 Ribonuclease III, endonuclease domain superfamily EP550_04670 IPR006073 GTP binding domain EP550_04670 IPR030388 Era-type guanine nucleotide-binding (G) domain EP550_04670 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_04670 IPR005662 GTP-binding protein Era EP550_04670 IPR015946 K homology domain-like, alpha/beta EP550_04670 IPR009019 K homology domain superfamily, prokaryotic type EP550_04670 IPR004044 K Homology domain, type 2 EP550_04670 IPR005225 Small GTP-binding protein domain EP550_04680 IPR003717 Recombination protein O, RecO EP550_04680 IPR037278 ARFGAP/RecO-like zinc finger EP550_04680 IPR022572 DNA replication/recombination mediator RecO, N-terminal EP550_04680 IPR012340 Nucleic acid-binding, OB-fold EP550_04685 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ EP550_04685 IPR013785 Aldolase-type TIM barrel EP550_04685 IPR036130 Pyridoxine 5'-phosphate synthase EP550_04690 IPR010386 tRNA-hydroxylase MiaE EP550_04690 IPR009078 Ferritin-like superfamily EP550_04690 IPR012347 Ferritin-like EP550_04695 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_04695 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_04695 IPR036291 NAD(P)-binding domain superfamily EP550_04735 IPR029787 Nucleotide cyclase EP550_04735 IPR000160 GGDEF domain EP550_04735 IPR033416 Periplasmic sensor domain CHASE7 EP550_04745 IPR001943 UVR domain EP550_04745 IPR004807 UvrABC system, subunit B EP550_04745 IPR041471 UvrB, interaction domain EP550_04745 IPR001650 Helicase, C-terminal EP550_04745 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_04745 IPR006935 Helicase/UvrB, N-terminal EP550_04745 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP550_04745 IPR036876 UVR domain superfamily EP550_04745 IPR024759 UvrB, YAD/RRR-motif-containing domain EP550_04755 IPR000620 EamA domain EP550_04755 IPR004626 RarD protein EP550_04760 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family EP550_04760 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I EP550_04760 IPR036291 NAD(P)-binding domain superfamily EP550_04760 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain EP550_04760 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain EP550_04760 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site EP550_04785 IPR035101 GTP-binding protein, Obg-type EP550_04785 IPR014100 GTP-binding protein Obg/CgtA EP550_04785 IPR036726 GTP1/OBG domain superfamily EP550_04785 IPR031167 OBG-type guanine nucleotide-binding (G) domain EP550_04785 IPR006169 GTP1/OBG domain EP550_04785 IPR006074 GTP1/OBG, conserved site EP550_04785 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_04785 IPR006073 GTP binding domain EP550_04790 IPR015947 PUA-like superfamily EP550_04790 IPR036393 Acetylglutamate kinase-like superfamily EP550_04790 IPR001057 Glutamate/acetylglutamate kinase EP550_04790 IPR001048 Aspartate/glutamate/uridylate kinase EP550_04790 IPR041739 Glutamate-5-kinase domain EP550_04790 IPR019797 Glutamate 5-kinase, conserved site EP550_04790 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase EP550_04790 IPR011529 Glutamate 5-kinase EP550_04790 IPR036974 PUA domain superfamily EP550_04790 IPR002478 PUA domain EP550_04800 IPR011673 Protein of unknown function DUF1615 EP550_04805 IPR032887 tRNA-dihydrouridine synthase B EP550_04805 IPR013785 Aldolase-type TIM barrel EP550_04805 IPR035587 DUS-like, FMN-binding domain EP550_04805 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal EP550_04805 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 EP550_04805 IPR001269 tRNA-dihydrouridine synthase EP550_04805 IPR018517 tRNA-dihydrouridine synthase, conserved site EP550_04810 IPR013785 Aldolase-type TIM barrel EP550_04810 IPR004136 Nitronate monooxygenase EP550_04825 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like EP550_04825 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain EP550_04840 IPR029044 Nucleotide-diphospho-sugar transferases EP550_04855 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain EP550_04855 IPR006050 DNA photolyase, N-terminal EP550_04855 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily EP550_04855 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_04855 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily EP550_04855 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal EP550_04855 IPR002081 Cryptochrome/DNA photolyase class 1 EP550_04860 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain EP550_04865 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_04865 IPR023753 FAD/NAD(P)-binding domain EP550_04870 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal EP550_04870 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily EP550_04870 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A EP550_04870 IPR015956 Penicillin-binding protein, C-terminal domain superfamily EP550_04870 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal EP550_04870 IPR012338 Beta-lactamase/transpeptidase-like EP550_04880 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric EP550_04885 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F EP550_04885 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site EP550_04885 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain EP550_04885 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP550_04885 IPR006145 Pseudouridine synthase, RsuA/RluA EP550_04890 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic EP550_04890 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site EP550_04890 IPR024084 Isopropylmalate dehydrogenase-like domain EP550_04910 IPR010645 Uncharacterised MFS-type transporter YbfB EP550_04910 IPR036259 MFS transporter superfamily EP550_04915 IPR000847 Transcription regulator HTH, LysR EP550_04915 IPR005119 LysR, substrate-binding EP550_04915 IPR036390 Winged helix DNA-binding domain superfamily EP550_04915 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_04925 IPR003719 Phenazine biosynthesis PhzF protein EP550_04930 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like EP550_04930 IPR011765 Peptidase M16, N-terminal EP550_04930 IPR001431 Peptidase M16, zinc-binding site EP550_04930 IPR007863 Peptidase M16, C-terminal EP550_04955 IPR036206 Thiamin phosphate synthase superfamily EP550_04955 IPR013785 Aldolase-type TIM barrel EP550_04955 IPR034291 Thiamine phosphate synthase EP550_04955 IPR022998 Thiamine phosphate synthase/TenI EP550_04960 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase EP550_04960 IPR005814 Aminotransferase class-III EP550_04960 IPR015424 Pyridoxal phosphate-dependent transferase EP550_04960 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_04960 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_04970 IPR006145 Pseudouridine synthase, RsuA/RluA EP550_04970 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP550_04970 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site EP550_04975 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP550_04975 IPR000330 SNF2-related, N-terminal domain EP550_04975 IPR038718 SNF2-like, N-terminal domain superfamily EP550_04975 IPR022737 RNA polymerase recycling, bacterial, C-terminal EP550_04975 IPR023949 RNA polymerase-associated protein RapA EP550_04975 IPR040765 RapA, N-terminal Tudor like domain 1 EP550_04975 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_04975 IPR001650 Helicase, C-terminal EP550_04975 IPR040766 RapA, N-terminal Tudor-like domain 2 EP550_04985 IPR001647 DNA-binding HTH domain, TetR-type EP550_04985 IPR023764 Transcriptional repressor HTH, FabR EP550_04985 IPR009057 Homeobox-like domain superfamily EP550_04990 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP550_04990 IPR012675 Beta-grasp domain superfamily EP550_04990 IPR036010 2Fe-2S ferredoxin-like superfamily EP550_04990 IPR017938 Riboflavin synthase-like beta-barrel EP550_04990 IPR000951 Phthalate dioxygenase reductase EP550_04990 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain EP550_04990 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP550_04990 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP550_04990 IPR017927 FAD-binding domain, ferredoxin reductase-type EP550_04995 IPR005804 Fatty acid desaturase domain EP550_05005 IPR041347 MftR, C-terminal EP550_05005 IPR001647 DNA-binding HTH domain, TetR-type EP550_05005 IPR023772 DNA-binding HTH domain, TetR-type, conserved site EP550_05005 IPR009057 Homeobox-like domain superfamily EP550_05015 IPR015424 Pyridoxal phosphate-dependent transferase EP550_05015 IPR005814 Aminotransferase class-III EP550_05015 IPR004637 2,4-diaminobutyrate 4-transaminase EP550_05015 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_05015 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_05020 IPR002129 Pyridoxal phosphate-dependent decarboxylase EP550_05020 IPR015424 Pyridoxal phosphate-dependent transferase EP550_05020 IPR021115 Pyridoxal-phosphate binding site EP550_05020 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_05025 IPR015590 Aldehyde dehydrogenase domain EP550_05025 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_05025 IPR016161 Aldehyde/histidinol dehydrogenase EP550_05025 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP550_05025 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_05025 IPR016160 Aldehyde dehydrogenase, cysteine active site EP550_05030 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP550_05030 IPR011991 ArsR-like helix-turn-helix domain EP550_05030 IPR019888 Transcription regulator AsnC-type EP550_05030 IPR011008 Dimeric alpha-beta barrel EP550_05030 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP550_05030 IPR000485 AsnC-type HTH domain EP550_05030 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_05030 IPR036390 Winged helix DNA-binding domain superfamily EP550_05035 IPR029035 DHS-like NAD/FAD-binding domain superfamily EP550_05035 IPR029061 Thiamin diphosphate-binding fold EP550_05035 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme EP550_05035 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding EP550_05035 IPR012000 Thiamine pyrophosphate enzyme, central domain EP550_05035 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain EP550_05040 IPR004841 Amino acid permease/ SLC12A domain EP550_05040 IPR004840 Amino acid permease, conserved site EP550_05045 IPR011862 Phosphate binding protein EP550_05045 IPR024370 PBP domain EP550_05050 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_05050 IPR035906 MetI-like superfamily EP550_05050 IPR011864 Phosphate ABC transporter, permease protein PstC EP550_05055 IPR035906 MetI-like superfamily EP550_05055 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_05055 IPR005672 Phosphate transport system permease protein PstA EP550_05060 IPR003593 AAA+ ATPase domain EP550_05060 IPR003439 ABC transporter-like EP550_05060 IPR017871 ABC transporter, conserved site EP550_05060 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_05060 IPR015850 ABC transporter, phosphate import, PstB EP550_05060 IPR005670 Phosphate transport system permease protein 1 EP550_05065 IPR002142 Peptidase S49 EP550_05065 IPR013703 Peptidase S49, N-terminal proteobacteria EP550_05065 IPR029045 ClpP/crotonase-like domain superfamily EP550_05080 IPR020557 Fumarate lyase, conserved site EP550_05080 IPR008948 L-Aspartase-like EP550_05080 IPR013539 Adenylosuccinate lyase PurB, C-terminal EP550_05080 IPR024083 Fumarase/histidase, N-terminal EP550_05080 IPR004769 Adenylosuccinate lyase EP550_05080 IPR022761 Fumarate lyase, N-terminal EP550_05080 IPR000362 Fumarate lyase family EP550_05085 IPR007451 High frequency lysogenization protein HflD EP550_05085 IPR035932 HflD-like superfamily EP550_05090 IPR004506 tRNA-specific 2-thiouridylase EP550_05090 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_05090 IPR023382 Adenine nucleotide alpha hydrolase-like domains EP550_05095 IPR000086 NUDIX hydrolase domain EP550_05095 IPR020084 NUDIX hydrolase, conserved site EP550_05095 IPR015797 NUDIX hydrolase-like domain superfamily EP550_05095 IPR023214 HAD superfamily EP550_05095 IPR006357 HAD-superfamily hydrolase, subfamily IIA EP550_05095 IPR036412 HAD-like superfamily EP550_05095 IPR020476 NUDIX hydrolase EP550_05100 IPR001451 Hexapeptide repeat EP550_05100 IPR011004 Trimeric LpxA-like superfamily EP550_05105 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A EP550_05105 IPR015956 Penicillin-binding protein, C-terminal domain superfamily EP550_05105 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily EP550_05105 IPR012338 Beta-lactamase/transpeptidase-like EP550_05105 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal EP550_05105 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal EP550_05120 IPR036523 SurE-like phosphatase/nucleotidase superfamily EP550_05120 IPR030048 Survival protein SurE EP550_05120 IPR002828 Survival protein SurE-like phosphatase/nucleotidase EP550_05125 IPR011055 Duplicated hybrid motif EP550_05125 IPR018392 LysM domain EP550_05125 IPR036779 LysM domain superfamily EP550_05125 IPR016047 Peptidase M23 EP550_05130 IPR005119 LysR, substrate-binding EP550_05130 IPR000847 Transcription regulator HTH, LysR EP550_05130 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_05130 IPR036390 Winged helix DNA-binding domain superfamily EP550_05135 IPR041699 Lon protease, AAA domain EP550_05135 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_05135 IPR008269 Peptidase S16, Lon proteolytic domain EP550_05135 IPR027065 Lon protease EP550_05135 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP550_05140 IPR036259 MFS transporter superfamily EP550_05140 IPR020846 Major facilitator superfamily domain EP550_05140 IPR011701 Major facilitator superfamily EP550_05140 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 EP550_05145 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase EP550_05145 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain EP550_05145 IPR037523 Vicinal oxygen chelate (VOC) domain EP550_05145 IPR018146 Glyoxalase I, conserved site EP550_05145 IPR004361 Glyoxalase I EP550_05150 IPR016833 Putative sodium bile acid cotransporter EP550_05150 IPR038770 Sodium/solute symporter superfamily EP550_05155 IPR034704 L28p-like EP550_05155 IPR027491 Ribosomal protein L31 type A EP550_05155 IPR042105 Ribosomal protein L31 superfamily EP550_05155 IPR002150 Ribosomal protein L31 EP550_05170 IPR007197 Radical SAM EP550_05170 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase EP550_05170 IPR013785 Aldolase-type TIM barrel EP550_05170 IPR022462 Lysine-2,3-aminomutase-like EP550_05175 IPR020599 Translation elongation factor P/YeiP EP550_05175 IPR012340 Nucleic acid-binding, OB-fold EP550_05175 IPR015365 Elongation factor P, C-terminal EP550_05175 IPR014722 Ribosomal protein L2, domain 2 EP550_05175 IPR013185 Translation elongation factor, KOW-like EP550_05175 IPR001059 Translation elongation factor P/YeiP, central EP550_05175 IPR008991 Translation protein SH3-like domain superfamily EP550_05175 IPR011768 Translation elongation factor P EP550_05180 IPR025299 CstA, C-terminal domain EP550_05180 IPR003706 CstA, N-terminal domain EP550_05185 IPR007423 Selenoprotein, putative EP550_05220 IPR029016 GAF-like domain superfamily EP550_05220 IPR025736 PucR C-terminal helix-turn-helix domain EP550_05220 IPR041522 CdaR, GGDEF-like domain EP550_05220 IPR042070 PucR C-terminal helix-turn-helix domain superfamily EP550_05220 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal EP550_05235 IPR015590 Aldehyde dehydrogenase domain EP550_05235 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_05235 IPR016160 Aldehyde dehydrogenase, cysteine active site EP550_05235 IPR016161 Aldehyde/histidinol dehydrogenase EP550_05235 IPR010061 Methylmalonate-semialdehyde dehydrogenase EP550_05235 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_05240 IPR011265 GABA permease EP550_05240 IPR004840 Amino acid permease, conserved site EP550_05240 IPR004841 Amino acid permease/ SLC12A domain EP550_05245 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_05245 IPR036390 Winged helix DNA-binding domain superfamily EP550_05245 IPR005119 LysR, substrate-binding EP550_05245 IPR000847 Transcription regulator HTH, LysR EP550_05250 IPR000060 BCCT transporter family EP550_05250 IPR018093 BCCT transporter, conserved site EP550_05255 IPR000060 BCCT transporter family EP550_05255 IPR018093 BCCT transporter, conserved site EP550_05260 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site EP550_05260 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit EP550_05260 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain EP550_05260 IPR017941 Rieske [2Fe-2S] iron-sulphur domain EP550_05260 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP550_05270 IPR023753 FAD/NAD(P)-binding domain EP550_05270 IPR041364 Rubredoxin binding domain EP550_05270 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_05275 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal EP550_05275 IPR006076 FAD dependent oxidoreductase EP550_05275 IPR008471 MnmC-like methyltransferase EP550_05275 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_05275 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC EP550_05295 IPR000620 EamA domain EP550_05305 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM EP550_05305 IPR036165 YefM-like superfamily EP550_05310 IPR005829 Sugar transporter, conserved site EP550_05310 IPR036259 MFS transporter superfamily EP550_05310 IPR005828 Major facilitator, sugar transporter-like EP550_05310 IPR020846 Major facilitator superfamily domain EP550_05310 IPR003663 Sugar/inositol transporter EP550_05315 IPR034620 cis-3-Hydroxy-L-proline dehydratase EP550_05315 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain EP550_05315 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal EP550_05315 IPR036849 Enolase-like, C-terminal domain superfamily EP550_05315 IPR029065 Enolase C-terminal domain-like EP550_05315 IPR029017 Enolase-like, N-terminal EP550_05320 IPR016039 Thiolase-like EP550_05320 IPR036291 NAD(P)-binding domain superfamily EP550_05320 IPR009081 Phosphopantetheine binding ACP domain EP550_05320 IPR006162 Phosphopantetheine attachment site EP550_05320 IPR015357 Erythronolide synthase, docking EP550_05320 IPR036347 Erythronolide synthase, docking domain superfamily EP550_05320 IPR013154 Alcohol dehydrogenase, N-terminal EP550_05320 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase EP550_05320 IPR014043 Acyl transferase EP550_05320 IPR036736 ACP-like superfamily EP550_05320 IPR014031 Beta-ketoacyl synthase, C-terminal EP550_05320 IPR014030 Beta-ketoacyl synthase, N-terminal EP550_05320 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding EP550_05320 IPR011032 GroES-like superfamily EP550_05320 IPR018201 Beta-ketoacyl synthase, active site EP550_05320 IPR032821 Ketoacyl-synthetase, C-terminal extension EP550_05320 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain EP550_05320 IPR020807 Polyketide synthase, dehydratase domain EP550_05320 IPR042104 Polyketide synthase, dehydratase domain superfamily EP550_05320 IPR020843 Polyketide synthase, enoylreductase domain EP550_05320 IPR013968 Polyketide synthase, ketoreductase domain EP550_05320 IPR020806 Polyketide synthase, phosphopantetheine-binding domain EP550_05320 IPR015083 Polyketide synthase, docking domain EP550_05320 IPR001227 Acyl transferase domain superfamily EP550_05325 IPR009057 Homeobox-like domain superfamily EP550_05325 IPR001647 DNA-binding HTH domain, TetR-type EP550_05325 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP550_05345 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain EP550_05345 IPR012093 Pirin EP550_05345 IPR014710 RmlC-like jelly roll fold EP550_05345 IPR003829 Pirin, N-terminal domain EP550_05345 IPR011051 RmlC-like cupin domain superfamily EP550_05355 IPR039446 Transcriptional regulator DauR-like EP550_05355 IPR039445 Transcriptional regulator DauR-like, HTH domain EP550_05355 IPR013559 YheO-like EP550_05365 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily EP550_05365 IPR042099 AMP-dependent synthetase-like superfamily EP550_05365 IPR000873 AMP-dependent synthetase/ligase EP550_05365 IPR010060 Non-ribosomal peptide synthase EP550_05365 IPR020806 Polyketide synthase, phosphopantetheine-binding domain EP550_05365 IPR020845 AMP-binding, conserved site EP550_05365 IPR009081 Phosphopantetheine binding ACP domain EP550_05365 IPR006162 Phosphopantetheine attachment site EP550_05365 IPR025110 AMP-binding enzyme, C-terminal domain EP550_05365 IPR010071 Amino acid adenylation domain EP550_05365 IPR001242 Condensation domain EP550_05365 IPR036736 ACP-like superfamily EP550_05370 IPR010071 Amino acid adenylation domain EP550_05370 IPR020802 Polyketide synthase, thioesterase domain EP550_05370 IPR020806 Polyketide synthase, phosphopantetheine-binding domain EP550_05370 IPR001242 Condensation domain EP550_05370 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily EP550_05370 IPR042099 AMP-dependent synthetase-like superfamily EP550_05370 IPR000873 AMP-dependent synthetase/ligase EP550_05370 IPR009081 Phosphopantetheine binding ACP domain EP550_05370 IPR020845 AMP-binding, conserved site EP550_05370 IPR036736 ACP-like superfamily EP550_05370 IPR029058 Alpha/Beta hydrolase fold EP550_05370 IPR025110 AMP-binding enzyme, C-terminal domain EP550_05370 IPR001031 Thioesterase EP550_05375 IPR000522 ABC transporter, permease protein, BtuC-like EP550_05375 IPR037294 ABC transporter, BtuC-like EP550_05380 IPR037294 ABC transporter, BtuC-like EP550_05380 IPR000522 ABC transporter, permease protein, BtuC-like EP550_05385 IPR003593 AAA+ ATPase domain EP550_05385 IPR017871 ABC transporter, conserved site EP550_05385 IPR003439 ABC transporter-like EP550_05385 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_05390 IPR033870 FatB domain EP550_05390 IPR002491 ABC transporter periplasmic binding domain EP550_05395 IPR010105 TonB-dependent siderophore receptor EP550_05395 IPR010917 TonB-dependent receptor, conserved site EP550_05395 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP550_05395 IPR010916 TonB box, conserved site EP550_05395 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_05395 IPR039423 TonB-dependent receptor-like EP550_05395 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_05395 IPR030149 TonB-dependent siderophore receptor FcuA/FatA EP550_05395 IPR012910 TonB-dependent receptor, plug domain EP550_05410 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase EP550_05410 IPR031043 Putative histamine N-monooxygenase EP550_05410 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_05415 IPR042099 AMP-dependent synthetase-like superfamily EP550_05415 IPR006162 Phosphopantetheine attachment site EP550_05415 IPR009081 Phosphopantetheine binding ACP domain EP550_05415 IPR020806 Polyketide synthase, phosphopantetheine-binding domain EP550_05415 IPR010071 Amino acid adenylation domain EP550_05415 IPR029058 Alpha/Beta hydrolase fold EP550_05415 IPR036736 ACP-like superfamily EP550_05415 IPR020845 AMP-binding, conserved site EP550_05415 IPR000873 AMP-dependent synthetase/ligase EP550_05415 IPR001242 Condensation domain EP550_05415 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily EP550_05420 IPR042099 AMP-dependent synthetase-like superfamily EP550_05420 IPR011963 2,3-dihydroxybenzoate-AMP ligase EP550_05420 IPR000873 AMP-dependent synthetase/ligase EP550_05420 IPR020845 AMP-binding, conserved site EP550_05420 IPR025110 AMP-binding enzyme, C-terminal domain EP550_05425 IPR036736 ACP-like superfamily EP550_05425 IPR016291 Isochorismatase EP550_05425 IPR000868 Isochorismatase-like EP550_05425 IPR036380 Isochorismatase-like superfamily EP550_05425 IPR009081 Phosphopantetheine binding ACP domain EP550_05430 IPR023523 Histidine decarboxylase, bacteria EP550_05430 IPR021115 Pyridoxal-phosphate binding site EP550_05430 IPR002129 Pyridoxal phosphate-dependent decarboxylase EP550_05430 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_05430 IPR015424 Pyridoxal phosphate-dependent transferase EP550_05440 IPR003439 ABC transporter-like EP550_05440 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_05440 IPR011527 ABC transporter type 1, transmembrane domain EP550_05440 IPR036640 ABC transporter type 1, transmembrane domain superfamily EP550_05440 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC EP550_05440 IPR003593 AAA+ ATPase domain EP550_05445 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_05445 IPR011917 ABC transporter, lipid A export, MsbA EP550_05445 IPR017871 ABC transporter, conserved site EP550_05445 IPR036640 ABC transporter type 1, transmembrane domain superfamily EP550_05445 IPR011527 ABC transporter type 1, transmembrane domain EP550_05445 IPR003593 AAA+ ATPase domain EP550_05445 IPR003439 ABC transporter-like EP550_05450 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS EP550_05450 IPR001031 Thioesterase EP550_05450 IPR029058 Alpha/Beta hydrolase fold EP550_05460 IPR015890 Chorismate-utilising enzyme, C-terminal EP550_05460 IPR005801 ADC synthase EP550_05460 IPR004561 Isochorismate synthase EP550_05470 IPR038071 UROD/MetE-like superfamily EP550_05470 IPR006361 Uroporphyrinogen decarboxylase HemE EP550_05470 IPR000257 Uroporphyrinogen decarboxylase (URO-D) EP550_05475 IPR008535 Protein of unknown function DUF817 EP550_05490 IPR012338 Beta-lactamase/transpeptidase-like EP550_05490 IPR001586 Beta-lactamase, class-C active site EP550_05490 IPR001466 Beta-lactamase-related EP550_05505 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP550_05505 IPR036010 2Fe-2S ferredoxin-like superfamily EP550_05505 IPR036884 [2Fe-2S]-binding domain superfamily EP550_05505 IPR002888 [2Fe-2S]-binding EP550_05505 IPR012675 Beta-grasp domain superfamily EP550_05505 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site EP550_05510 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily EP550_05510 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding EP550_05510 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily EP550_05510 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead EP550_05525 IPR013785 Aldolase-type TIM barrel EP550_05525 IPR013798 Indole-3-glycerol phosphate synthase EP550_05525 IPR001468 Indole-3-glycerol phosphate synthase, conserved site EP550_05525 IPR011060 Ribulose-phosphate binding barrel EP550_05530 IPR000312 Glycosyl transferase, family 3 EP550_05530 IPR017459 Glycosyl transferase family 3, N-terminal domain EP550_05530 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily EP550_05530 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily EP550_05530 IPR005940 Anthranilate phosphoribosyl transferase EP550_05535 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP550_05535 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_05535 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_05535 IPR012910 TonB-dependent receptor, plug domain EP550_05535 IPR039426 Vitamin B12 transporter BtuB-like EP550_05535 IPR010101 TonB-dependent vitamin B12 transporter BtuB EP550_05535 IPR010917 TonB-dependent receptor, conserved site EP550_05535 IPR010916 TonB box, conserved site EP550_05540 IPR024571 ERAP1-like C-terminal domain EP550_05540 IPR034016 Aminopeptidase N-type EP550_05540 IPR042097 Aminopeptidase N-like , N-terminal EP550_05540 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase EP550_05540 IPR014782 Peptidase M1, membrane alanine aminopeptidase EP550_05545 IPR029062 Class I glutamine amidotransferase-like EP550_05545 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain EP550_05545 IPR017926 Glutamine amidotransferase EP550_05760 IPR039552 Transposase IS66, C-terminal EP550_05760 IPR004291 Transposase, IS66 EP550_05760 IPR024474 Zinc-finger binding domain of transposase IS66 EP550_05760 IPR024463 Transposase TnpC, homeodomain EP550_05840 IPR031807 HicB-like antitoxin of toxin-antitoxin system EP550_05840 IPR035069 TTHA1013/TTHA0281-like EP550_05850 IPR025668 Transposase DDE domain EP550_05855 IPR000917 Sulfatase, N-terminal EP550_05855 IPR040423 Phosphoethanolamine transferase EP550_05855 IPR012549 Phosphoethanolamine transferase, N-terminal EP550_05855 IPR017850 Alkaline-phosphatase-like, core domain superfamily EP550_05890 IPR007865 Aminopeptidase P, N-terminal EP550_05890 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal EP550_05890 IPR036005 Creatinase/aminopeptidase-like EP550_05890 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site EP550_05890 IPR000994 Peptidase M24 EP550_05895 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 EP550_05895 IPR002938 FAD-binding domain EP550_05895 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_05895 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site EP550_05895 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase EP550_05900 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 EP550_05900 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site EP550_05900 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_05900 IPR002938 FAD-binding domain EP550_05910 IPR009061 Putative DNA-binding domain superfamily EP550_05910 IPR011794 Hg(II)-responsive transcriptional regulator EP550_05910 IPR000551 MerR-type HTH domain EP550_05920 IPR023445 Arginine exporter protein ArgO, enterobacteria EP550_05920 IPR001123 Amino acid exporter protein, LeuE-type EP550_05920 IPR004777 L-lysine exporter/arginine exporter EP550_05925 IPR000847 Transcription regulator HTH, LysR EP550_05925 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_05925 IPR005119 LysR, substrate-binding EP550_05925 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria EP550_05925 IPR017685 HTH-type transcriptional regulator ArgP EP550_05925 IPR036390 Winged helix DNA-binding domain superfamily EP550_05935 IPR018063 SAM-dependent methyltransferase RsmI, conserved site EP550_05935 IPR008189 rRNA small subunit methyltransferase I EP550_05935 IPR000878 Tetrapyrrole methylase EP550_05935 IPR014777 Tetrapyrrole methylase, subdomain 1 EP550_05935 IPR014776 Tetrapyrrole methylase, subdomain 2 EP550_05935 IPR035996 Tetrapyrrole methylase superfamily EP550_05940 IPR003509 Uncharacterised protein family UPF0102 EP550_05940 IPR011856 tRNA endonuclease-like domain superfamily EP550_05940 IPR011335 Restriction endonuclease type II-like EP550_05945 IPR007055 BON domain EP550_05945 IPR014004 Transport-associated and nodulation domain, bacteria EP550_05955 IPR022925 NADH pyrophosphatase NudC EP550_05955 IPR015797 NUDIX hydrolase-like domain superfamily EP550_05955 IPR020084 NUDIX hydrolase, conserved site EP550_05955 IPR015376 Zinc ribbon, NADH pyrophosphatase EP550_05955 IPR000086 NUDIX hydrolase domain EP550_05965 IPR036397 Ribonuclease H superfamily EP550_05965 IPR012337 Ribonuclease H-like superfamily EP550_05965 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain EP550_05965 IPR006309 DNA polymerase 3, epsilon subunit EP550_05965 IPR013520 Exonuclease, RNase T/DNA polymerase III EP550_05970 IPR008258 Transglycosylase SLT domain 1 EP550_05970 IPR018392 LysM domain EP550_05970 IPR023346 Lysozyme-like domain superfamily EP550_05970 IPR036779 LysM domain superfamily EP550_05970 IPR000189 Prokaryotic transglycosylase, active site EP550_05970 IPR008258 Transglycosylase SLT domain 1 EP550_05970 IPR018392 LysM domain EP550_05970 IPR036779 LysM domain superfamily EP550_05970 IPR023346 Lysozyme-like domain superfamily EP550_05970 IPR000189 Prokaryotic transglycosylase, active site EP550_05975 IPR039424 Solute-binding protein family 5 EP550_05975 IPR030678 Peptide/nickel binding protein, MppA-type EP550_05975 IPR000914 Solute-binding protein family 5 domain EP550_05980 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_05980 IPR035906 MetI-like superfamily EP550_05985 IPR025966 Oligopeptide transport permease C-like, N-terminal domain EP550_05985 IPR035906 MetI-like superfamily EP550_05985 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_05990 IPR003593 AAA+ ATPase domain EP550_05990 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_05990 IPR017871 ABC transporter, conserved site EP550_05990 IPR003439 ABC transporter-like EP550_05990 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal EP550_05995 IPR013785 Aldolase-type TIM barrel EP550_05995 IPR023753 FAD/NAD(P)-binding domain EP550_05995 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal EP550_05995 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_06000 IPR012910 TonB-dependent receptor, plug domain EP550_06000 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_06000 IPR039423 TonB-dependent receptor-like EP550_06000 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_06000 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP550_06000 IPR010105 TonB-dependent siderophore receptor EP550_06010 IPR005987 Ribonuclease T EP550_06010 IPR012337 Ribonuclease H-like superfamily EP550_06010 IPR013520 Exonuclease, RNase T/DNA polymerase III EP550_06010 IPR036397 Ribonuclease H superfamily EP550_06015 IPR006680 Amidohydrolase-related EP550_06015 IPR004721 Dihydroorotase homodimeric type EP550_06015 IPR002195 Dihydroorotase, conserved site EP550_06015 IPR032466 Metal-dependent hydrolase EP550_06020 IPR001294 Phytochrome EP550_06020 IPR001633 EAL domain EP550_06020 IPR013515 Phytochrome, central region EP550_06020 IPR035919 EAL domain superfamily EP550_06020 IPR003018 GAF domain EP550_06020 IPR029016 GAF-like domain superfamily EP550_06020 IPR000160 GGDEF domain EP550_06020 IPR016132 Phytochrome chromophore attachment domain EP550_06020 IPR029787 Nucleotide cyclase EP550_06025 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_06025 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail EP550_06025 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body EP550_06025 IPR023434 Argininosuccinate synthase, type 1 subfamily EP550_06025 IPR023437 Argininosuccinate synthase, type 2 subfamily EP550_06025 IPR001518 Argininosuccinate synthase EP550_06025 IPR018223 Argininosuccinate synthase, conserved site EP550_06030 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal EP550_06030 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_06030 IPR013785 Aldolase-type TIM barrel EP550_06030 IPR023753 FAD/NAD(P)-binding domain EP550_06045 IPR010295 Protein of unknown function DUF898 EP550_06050 IPR004872 Lipoprotein NlpA family EP550_06065 IPR032074 Actin cross-linking domain EP550_06065 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset EP550_06065 IPR037026 Vgr protein, OB-fold domain superfamily EP550_06065 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein EP550_06065 IPR006531 Gp5 N-terminal EP550_06075 IPR032874 DDE domain EP550_06075 IPR036397 Ribonuclease H superfamily EP550_06075 IPR012337 Ribonuclease H-like superfamily EP550_06075 IPR001584 Integrase, catalytic core EP550_06085 IPR009057 Homeobox-like domain superfamily EP550_06085 IPR001647 DNA-binding HTH domain, TetR-type EP550_06085 IPR023772 DNA-binding HTH domain, TetR-type, conserved site EP550_06085 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal EP550_06085 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP550_06090 IPR012093 Pirin EP550_06090 IPR003829 Pirin, N-terminal domain EP550_06090 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain EP550_06090 IPR014710 RmlC-like jelly roll fold EP550_06090 IPR011051 RmlC-like cupin domain superfamily EP550_06100 IPR001598 Transposase, IS30, conserved site EP550_06100 IPR001584 Integrase, catalytic core EP550_06100 IPR025246 Transposase IS30-like HTH domain EP550_06100 IPR012337 Ribonuclease H-like superfamily EP550_06100 IPR036397 Ribonuclease H superfamily EP550_06105 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_06105 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_06105 IPR036291 NAD(P)-binding domain superfamily EP550_06110 IPR020946 Flavin monooxygenase-like EP550_06110 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_06120 IPR006043 Xanthine/uracil/vitamin C permease EP550_06120 IPR026033 Azaguanine-like transporters EP550_06125 IPR001365 Adenosine/AMP deaminase domain EP550_06125 IPR006330 Adenosine/adenine deaminase EP550_06125 IPR028892 Adenine deaminase type 2 EP550_06125 IPR032466 Metal-dependent hydrolase EP550_06130 IPR016174 Di-haem cytochrome, transmembrane EP550_06130 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase EP550_06140 IPR001352 Ribonuclease HII/HIII EP550_06140 IPR022898 Ribonuclease HII EP550_06140 IPR012337 Ribonuclease H-like superfamily EP550_06140 IPR036397 Ribonuclease H superfamily EP550_06140 IPR024567 Ribonuclease HII/HIII domain EP550_06145 IPR036107 Carbon storage regulator superfamily EP550_06145 IPR003751 Translational regulator CsrA EP550_06150 IPR041740 Aspartokinase catalytic domain EP550_06150 IPR002912 ACT domain EP550_06150 IPR036393 Acetylglutamate kinase-like superfamily EP550_06150 IPR027795 CASTOR, ACT domain EP550_06150 IPR018042 Aspartate kinase, conserved site EP550_06150 IPR001341 Aspartate kinase EP550_06150 IPR005260 Aspartate kinase, monofunctional class EP550_06150 IPR001048 Aspartate/glutamate/uridylate kinase EP550_06155 IPR009000 Translation protein, beta-barrel domain superfamily EP550_06155 IPR002318 Alanine-tRNA ligase, class IIc EP550_06155 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily EP550_06155 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain EP550_06155 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal EP550_06155 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria EP550_06155 IPR003156 DHHA1 domain EP550_06155 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily EP550_06155 IPR012947 Threonyl/alanyl tRNA synthetase, SAD EP550_06160 IPR036291 NAD(P)-binding domain superfamily EP550_06160 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site EP550_06160 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family EP550_06160 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I EP550_06160 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain EP550_06160 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain EP550_06165 IPR004517 ATP phosphoribosyltransferase regulatory subunit EP550_06165 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain EP550_06165 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit EP550_06170 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_06170 IPR001114 Adenylosuccinate synthetase EP550_06170 IPR033128 Adenylosuccinate synthase, active site EP550_06170 IPR042109 Adenylosuccinate synthetase, domain 1 EP550_06170 IPR042111 Adenylosuccinate synthetase, domain 3 EP550_06170 IPR018220 Adenylosuccinate synthase, GTP-binding site EP550_06170 IPR042110 Adenylosuccinate synthetase, domain 2 EP550_06185 IPR036812 NADP-dependent oxidoreductase domain superfamily EP550_06185 IPR023210 NADP-dependent oxidoreductase domain EP550_06185 IPR020471 Aldo/keto reductase EP550_06190 IPR036390 Winged helix DNA-binding domain superfamily EP550_06190 IPR018335 Transcription regulator HTH, Crp-type, conserved site EP550_06190 IPR014710 RmlC-like jelly roll fold EP550_06190 IPR012318 Crp-type HTH domain EP550_06190 IPR000595 Cyclic nucleotide-binding domain EP550_06190 IPR018488 Cyclic nucleotide-binding, conserved site EP550_06190 IPR018490 Cyclic nucleotide-binding-like EP550_06190 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_06195 IPR015946 K homology domain-like, alpha/beta EP550_06195 IPR003718 OsmC/Ohr family EP550_06195 IPR036102 OsmC/Ohr superfamily EP550_06210 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_06210 IPR041546 ClpA/ClpB, AAA lid domain EP550_06210 IPR017730 Chaperonin ClpB EP550_06210 IPR019489 Clp ATPase, C-terminal EP550_06210 IPR001270 ClpA/B family EP550_06210 IPR003959 ATPase, AAA-type, core EP550_06210 IPR003593 AAA+ ATPase domain EP550_06210 IPR018368 ClpA/B, conserved site 1 EP550_06210 IPR028299 ClpA/B, conserved site 2 EP550_06210 IPR036628 Clp, N-terminal domain superfamily EP550_06210 IPR004176 Clp, N-terminal EP550_06225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_06225 IPR019614 S-adenosylmethionine-dependent methyltransferase EP550_06225 IPR000241 Putative RNA methylase domain EP550_06225 IPR002052 DNA methylase, N-6 adenine-specific, conserved site EP550_06225 IPR017244 Ribosomal RNA large subunit methyltransferase K/L EP550_06225 IPR004114 THUMP domain EP550_06235 IPR002082 Aspartate carbamoyltransferase EP550_06235 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily EP550_06235 IPR006130 Aspartate/ornithine carbamoyltransferase EP550_06235 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding EP550_06235 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain EP550_06240 IPR032466 Metal-dependent hydrolase EP550_06240 IPR004722 Dihydroorotase EP550_06240 IPR011059 Metal-dependent hydrolase, composite domain superfamily EP550_06240 IPR006680 Amidohydrolase-related EP550_06245 IPR006665 OmpA-like domain EP550_06245 IPR006664 Outer membrane protein, bacterial EP550_06245 IPR006690 Outer membrane protein, OmpA-like, conserved site EP550_06245 IPR039567 Glycine zipper domain EP550_06245 IPR036737 OmpA-like domain superfamily EP550_06255 IPR036249 Thioredoxin-like superfamily EP550_06255 IPR010987 Glutathione S-transferase, C-terminal-like EP550_06255 IPR036282 Glutathione S-transferase, C-terminal domain superfamily EP550_06255 IPR004045 Glutathione S-transferase, N-terminal EP550_06255 IPR004046 Glutathione S-transferase, C-terminal EP550_06260 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type EP550_06260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_06270 IPR010987 Glutathione S-transferase, C-terminal-like EP550_06270 IPR036249 Thioredoxin-like superfamily EP550_06270 IPR004046 Glutathione S-transferase, C-terminal EP550_06270 IPR004045 Glutathione S-transferase, N-terminal EP550_06270 IPR036282 Glutathione S-transferase, C-terminal domain superfamily EP550_06280 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_06280 IPR036249 Thioredoxin-like superfamily EP550_06280 IPR012336 Thioredoxin-like fold EP550_06280 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site EP550_06280 IPR002109 Glutaredoxin EP550_06280 IPR023753 FAD/NAD(P)-binding domain EP550_06280 IPR012081 Alkyl hydroperoxide reductase subunit F EP550_06290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_06290 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase EP550_06300 IPR036249 Thioredoxin-like superfamily EP550_06300 IPR013766 Thioredoxin domain EP550_06300 IPR019479 Peroxiredoxin, C-terminal EP550_06300 IPR024706 Peroxiredoxin, AhpC-type EP550_06300 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant EP550_06300 IPR017559 Alkyl hydroperoxide reductase subunit C EP550_06305 IPR010222 RNA helicase HrpA EP550_06305 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP550_06305 IPR011545 DEAD/DEAH box helicase domain EP550_06305 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_06305 IPR003593 AAA+ ATPase domain EP550_06305 IPR007502 Helicase-associated domain EP550_06305 IPR011709 Domain of unknown function DUF1605 EP550_06305 IPR001650 Helicase, C-terminal EP550_06305 IPR024590 RNA helicase HrpA, C-terminal EP550_06310 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EP550_06310 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 EP550_06310 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal EP550_06310 IPR016039 Thiolase-like EP550_06320 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family EP550_06320 IPR036259 MFS transporter superfamily EP550_06320 IPR011701 Major facilitator superfamily EP550_06320 IPR005829 Sugar transporter, conserved site EP550_06320 IPR020846 Major facilitator superfamily domain EP550_06325 IPR004711 Benzoate transporter EP550_06330 IPR036291 NAD(P)-binding domain superfamily EP550_06330 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_06330 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_06335 IPR036010 2Fe-2S ferredoxin-like superfamily EP550_06335 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site EP550_06335 IPR017938 Riboflavin synthase-like beta-barrel EP550_06335 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP550_06335 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase EP550_06335 IPR012675 Beta-grasp domain superfamily EP550_06335 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP550_06335 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain EP550_06335 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP550_06335 IPR017927 FAD-binding domain, ferredoxin reductase-type EP550_06340 IPR017641 Benzoate 1,2-dioxygenase, small subunit EP550_06340 IPR032710 NTF2-like domain superfamily EP550_06340 IPR000391 Ring-hydroxylating dioxygenase beta subunit EP550_06345 IPR017941 Rieske [2Fe-2S] iron-sulphur domain EP550_06345 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP550_06345 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site EP550_06345 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit EP550_06345 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain EP550_06345 IPR017639 Benzoate 1,2-dioxygenase, large subunit EP550_06350 IPR005119 LysR, substrate-binding EP550_06350 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_06350 IPR036390 Winged helix DNA-binding domain superfamily EP550_06350 IPR000847 Transcription regulator HTH, LysR EP550_06360 IPR023299 P-type ATPase, cytoplasmic domain N EP550_06360 IPR036412 HAD-like superfamily EP550_06360 IPR001757 P-type ATPase EP550_06360 IPR027256 P-type ATPase, subfamily IB EP550_06360 IPR036163 Heavy metal-associated domain superfamily EP550_06360 IPR018303 P-type ATPase, phosphorylation site EP550_06360 IPR006121 Heavy metal-associated domain, HMA EP550_06360 IPR008250 P-type ATPase, A domain superfamily EP550_06360 IPR006122 Heavy metal-associated domain, copper ion-binding EP550_06360 IPR023298 P-type ATPase, transmembrane domain superfamily EP550_06360 IPR017969 Heavy-metal-associated, conserved site EP550_06360 IPR023214 HAD superfamily EP550_06365 IPR000551 MerR-type HTH domain EP550_06365 IPR009061 Putative DNA-binding domain superfamily EP550_06365 IPR015358 Transcription regulator MerR, DNA binding EP550_06365 IPR011789 Cu(I)-responsive transcriptional regulator EP550_06385 IPR025668 Transposase DDE domain EP550_06415 IPR003753 Exonuclease VII, large subunit EP550_06415 IPR020579 Exonuclease VII, large subunit, C-terminal EP550_06415 IPR025824 OB-fold nucleic acid binding domain EP550_06450 IPR001123 Amino acid exporter protein, LeuE-type EP550_06455 IPR012340 Nucleic acid-binding, OB-fold EP550_06455 IPR012156 Cold shock, CspA EP550_06455 IPR011129 Cold shock domain EP550_06455 IPR019844 Cold-shock (CSD) domain EP550_06455 IPR002059 Cold-shock protein, DNA-binding EP550_06465 IPR036291 NAD(P)-binding domain superfamily EP550_06465 IPR000304 Pyrroline-5-carboxylate reductase EP550_06465 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain EP550_06465 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal EP550_06465 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP550_06495 IPR036259 MFS transporter superfamily EP550_06495 IPR020846 Major facilitator superfamily domain EP550_06495 IPR011701 Major facilitator superfamily EP550_06500 IPR002577 Helix-turn-helix, HxlR type EP550_06500 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_06500 IPR036390 Winged helix DNA-binding domain superfamily EP550_06500 IPR011991 ArsR-like helix-turn-helix domain EP550_06515 IPR001598 Transposase, IS30, conserved site EP550_06515 IPR036397 Ribonuclease H superfamily EP550_06515 IPR012337 Ribonuclease H-like superfamily EP550_06515 IPR025246 Transposase IS30-like HTH domain EP550_06515 IPR001584 Integrase, catalytic core EP550_06535 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding EP550_06535 IPR015803 Cysteine-tRNA ligase EP550_06535 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase EP550_06535 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_06535 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR EP550_06535 IPR032678 tRNA synthetases class I, catalytic domain EP550_06540 IPR000644 CBS domain EP550_06540 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type EP550_06540 IPR001347 Sugar isomerase (SIS) EP550_06540 IPR035474 KpsF-like, SIS domain EP550_06545 IPR036412 HAD-like superfamily EP550_06545 IPR010023 KdsC family EP550_06545 IPR023214 HAD superfamily EP550_06555 IPR014340 Lipopolysaccharide export system protein LptA EP550_06555 IPR005653 Organic solvent tolerance-like, N-terminal EP550_06560 IPR003593 AAA+ ATPase domain EP550_06560 IPR030921 LPS export ABC transporter, ATP-binding protein LptB EP550_06560 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_06560 IPR017871 ABC transporter, conserved site EP550_06560 IPR003439 ABC transporter-like EP550_06560 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal EP550_06565 IPR010130 Type I secretion outer membrane protein, TolC EP550_06565 IPR003423 Outer membrane efflux protein EP550_06570 IPR011527 ABC transporter type 1, transmembrane domain EP550_06570 IPR003593 AAA+ ATPase domain EP550_06570 IPR005074 Peptidase C39, bacteriocin processing EP550_06570 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_06570 IPR017871 ABC transporter, conserved site EP550_06570 IPR003439 ABC transporter-like EP550_06570 IPR005897 Peptidase C39, ABC-type bacteriocin transporter EP550_06570 IPR036640 ABC transporter type 1, transmembrane domain superfamily EP550_06570 IPR039421 Type I protein exporter EP550_06575 IPR010129 Type I secretion membrane fusion protein, HlyD family EP550_06575 IPR006144 Secretion protein HlyD, conserved site EP550_06580 IPR023582 Impact family EP550_06580 IPR035647 EF-G domain III/V-like EP550_06580 IPR036956 Impact, N-terminal domain superfamily EP550_06580 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_06580 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site EP550_06580 IPR001498 Impact, N-terminal EP550_06585 IPR001451 Hexapeptide repeat EP550_06585 IPR018357 Hexapeptide transferase, conserved site EP550_06585 IPR011004 Trimeric LpxA-like superfamily EP550_06595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_06595 IPR002935 Class I-like SAM-dependent O-methyltransferase EP550_06605 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site EP550_06605 IPR000813 7Fe ferredoxin EP550_06605 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain EP550_06605 IPR022569 Ferredoxin, C-terminal EP550_06615 IPR007696 DNA mismatch repair protein MutS, core EP550_06615 IPR005748 DNA mismatch repair protein MutS EP550_06615 IPR007860 DNA mismatch repair protein MutS, connector domain EP550_06615 IPR036678 MutS, connector domain superfamily EP550_06615 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_06615 IPR007861 DNA mismatch repair protein MutS, clamp EP550_06615 IPR000432 DNA mismatch repair protein MutS, C-terminal EP550_06615 IPR017261 DNA mismatch repair protein MutS/MSH EP550_06615 IPR007695 DNA mismatch repair protein MutS-like, N-terminal EP550_06615 IPR016151 DNA mismatch repair protein MutS, N-terminal EP550_06615 IPR036187 DNA mismatch repair protein MutS, core domain superfamily EP550_06620 IPR019888 Transcription regulator AsnC-type EP550_06620 IPR011008 Dimeric alpha-beta barrel EP550_06620 IPR000485 AsnC-type HTH domain EP550_06620 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP550_06620 IPR011991 ArsR-like helix-turn-helix domain EP550_06620 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_06620 IPR036390 Winged helix DNA-binding domain superfamily EP550_06620 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP550_06625 IPR000620 EamA domain EP550_06630 IPR001633 EAL domain EP550_06630 IPR035919 EAL domain superfamily EP550_06630 IPR000160 GGDEF domain EP550_06630 IPR005330 MHYT domain EP550_06630 IPR029787 Nucleotide cyclase EP550_06635 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase EP550_06635 IPR004960 Bacterial lipid A biosynthesis acyltransferase EP550_06650 IPR005829 Sugar transporter, conserved site EP550_06650 IPR036259 MFS transporter superfamily EP550_06650 IPR020846 Major facilitator superfamily domain EP550_06650 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family EP550_06650 IPR011701 Major facilitator superfamily EP550_06670 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal EP550_06670 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP550_06670 IPR013328 6-phosphogluconate dehydrogenase, domain 2 EP550_06670 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding EP550_06670 IPR026578 L-carnitine dehydrogenase EP550_06670 IPR036291 NAD(P)-binding domain superfamily EP550_06690 IPR023214 HAD superfamily EP550_06690 IPR023733 Pyrophosphatase PpaX EP550_06690 IPR023198 Phosphoglycolate phosphatase-like, domain 2 EP550_06690 IPR041492 Haloacid dehalogenase-like hydrolase EP550_06690 IPR006439 HAD hydrolase, subfamily IA EP550_06690 IPR036412 HAD-like superfamily EP550_06705 IPR032074 Actin cross-linking domain EP550_06705 IPR006531 Gp5 N-terminal EP550_06705 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset EP550_06705 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein EP550_06705 IPR037026 Vgr protein, OB-fold domain superfamily EP550_06710 IPR006530 YD repeat EP550_06710 IPR031325 RHS repeat EP550_06710 IPR001826 RHS protein EP550_06710 IPR022385 Rhs repeat-associated core EP550_06710 IPR025479 Domain of unknown function DUF4329 EP550_06725 IPR036390 Winged helix DNA-binding domain superfamily EP550_06725 IPR005119 LysR, substrate-binding EP550_06725 IPR000847 Transcription regulator HTH, LysR EP550_06725 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_06730 IPR001046 NRAMP family EP550_06735 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel EP550_06735 IPR005501 LamB/YcsF/PxpA-like EP550_06740 IPR009906 D-glutamate cyclase EP550_06740 IPR038021 Putative hydro-lyase EP550_06740 IPR016938 Uncharacterised protein family UPF0317 EP550_06750 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain EP550_06750 IPR000089 Biotin/lipoyl attachment EP550_06750 IPR011053 Single hybrid motif EP550_06750 IPR016185 Pre-ATP-grasp domain superfamily EP550_06750 IPR011761 ATP-grasp fold EP550_06750 IPR005481 Biotin carboxylase-like, N-terminal domain EP550_06750 IPR011054 Rudiment single hybrid motif EP550_06750 IPR001882 Biotin-binding site EP550_06750 IPR005482 Biotin carboxylase, C-terminal EP550_06750 IPR011764 Biotin carboxylation domain EP550_06755 IPR001807 Chloride channel, voltage gated EP550_06755 IPR014743 Chloride channel, core EP550_06770 IPR025668 Transposase DDE domain EP550_06785 IPR001647 DNA-binding HTH domain, TetR-type EP550_06785 IPR009057 Homeobox-like domain superfamily EP550_06820 IPR011761 ATP-grasp fold EP550_06820 IPR011054 Rudiment single hybrid motif EP550_06820 IPR011764 Biotin carboxylation domain EP550_06820 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain EP550_06820 IPR005482 Biotin carboxylase, C-terminal EP550_06820 IPR016185 Pre-ATP-grasp domain superfamily EP550_06820 IPR005481 Biotin carboxylase-like, N-terminal domain EP550_06825 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF EP550_06825 IPR029039 Flavoprotein-like superfamily EP550_06825 IPR003680 Flavodoxin-like fold EP550_06845 IPR013321 Arc-type ribbon-helix-helix EP550_06845 IPR010985 Ribbon-helix-helix EP550_06845 IPR022988 Nickel-responsive transcriptional regulator NikR EP550_06845 IPR002145 Ribbon-helix-helix protein, CopG EP550_06845 IPR014864 Transcription factor, NikR, nickel binding C-terminal EP550_06845 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal EP550_06850 IPR023631 Amidase signature domain EP550_06850 IPR014085 Allophanate hydrolase EP550_06850 IPR036928 Amidase signature (AS) superfamily EP550_06855 IPR001320 Ionotropic glutamate receptor EP550_06855 IPR018313 Solute-binding protein family 3, conserved site EP550_06855 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP550_06860 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_06860 IPR003593 AAA+ ATPase domain EP550_06860 IPR003439 ABC transporter-like EP550_06860 IPR017871 ABC transporter, conserved site EP550_06935 IPR006690 Outer membrane protein, OmpA-like, conserved site EP550_06935 IPR036737 OmpA-like domain superfamily EP550_06935 IPR000498 Outer membrane protein OmpA-like, transmembrane domain EP550_06935 IPR006665 OmpA-like domain EP550_06935 IPR002368 Outer membrane protein, OmpA EP550_06935 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel EP550_06935 IPR006664 Outer membrane protein, bacterial EP550_06945 IPR019489 Clp ATPase, C-terminal EP550_06945 IPR036628 Clp, N-terminal domain superfamily EP550_06945 IPR003593 AAA+ ATPase domain EP550_06945 IPR003959 ATPase, AAA-type, core EP550_06945 IPR017729 Type VI secretion system, ATPase ClpV1 EP550_06945 IPR004176 Clp, N-terminal EP550_06945 IPR001270 ClpA/B family EP550_06945 IPR018368 ClpA/B, conserved site 1 EP550_06945 IPR041546 ClpA/ClpB, AAA lid domain EP550_06945 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_06975 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain EP550_06975 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_06975 IPR000847 Transcription regulator HTH, LysR EP550_06975 IPR005119 LysR, substrate-binding EP550_06975 IPR036390 Winged helix DNA-binding domain superfamily EP550_06985 IPR016193 Cytidine deaminase-like EP550_06985 IPR002125 Cytidine and deoxycytidylate deaminase domain EP550_06985 IPR016192 APOBEC/CMP deaminase, zinc-binding EP550_06990 IPR020846 Major facilitator superfamily domain EP550_06990 IPR011701 Major facilitator superfamily EP550_06990 IPR036259 MFS transporter superfamily EP550_06990 IPR004747 Cyanate transport system protein EP550_07005 IPR003828 Epoxyqueuosine reductase QueH EP550_07015 IPR015358 Transcription regulator MerR, DNA binding EP550_07015 IPR009061 Putative DNA-binding domain superfamily EP550_07015 IPR000551 MerR-type HTH domain EP550_07015 IPR010211 Redox-sensitive transcriptional activator SoxR EP550_07030 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA EP550_07030 IPR020625 Schiff base-forming aldolase, active site EP550_07030 IPR020624 Schiff base-forming aldolase, conserved site EP550_07030 IPR002220 DapA-like EP550_07030 IPR013785 Aldolase-type TIM barrel EP550_07040 IPR008920 Transcription regulator FadR/GntR, C-terminal EP550_07040 IPR000524 Transcription regulator HTH, GntR EP550_07040 IPR036390 Winged helix DNA-binding domain superfamily EP550_07040 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07045 IPR008794 Proline racemase family EP550_07050 IPR006076 FAD dependent oxidoreductase EP550_07050 IPR023080 D-amino acid dehydrogenase DadA EP550_07050 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_07060 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B EP550_07060 IPR023753 FAD/NAD(P)-binding domain EP550_07060 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_07060 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily EP550_07060 IPR007419 BFD-like [2Fe-2S]-binding domain EP550_07070 IPR036259 MFS transporter superfamily EP550_07070 IPR020846 Major facilitator superfamily domain EP550_07070 IPR005828 Major facilitator, sugar transporter-like EP550_07070 IPR005829 Sugar transporter, conserved site EP550_07075 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_07075 IPR016161 Aldehyde/histidinol dehydrogenase EP550_07075 IPR015590 Aldehyde dehydrogenase domain EP550_07075 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_07080 IPR002293 Amino acid/polyamine transporter I EP550_07085 IPR029009 Allosteric substrate binding domain superfamily EP550_07085 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form EP550_07085 IPR005130 Serine dehydratase-like, alpha subunit EP550_07085 IPR005131 Serine dehydratase beta chain EP550_07090 IPR002539 MaoC-like dehydratase domain EP550_07090 IPR011966 Phenylacetic acid degradation protein PaaN EP550_07090 IPR016161 Aldehyde/histidinol dehydrogenase EP550_07090 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_07090 IPR015590 Aldehyde dehydrogenase domain EP550_07090 IPR029069 HotDog domain superfamily EP550_07090 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_07095 IPR012347 Ferritin-like EP550_07095 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C EP550_07095 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A EP550_07095 IPR009078 Ferritin-like superfamily EP550_07100 IPR038693 Phenylacetyl-CoA epoxidase, subunit B EP550_07100 IPR009359 Phenylacetic acid degradation B EP550_07105 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C EP550_07105 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C EP550_07105 IPR009078 Ferritin-like superfamily EP550_07105 IPR012347 Ferritin-like EP550_07110 IPR034904 Fe-S cluster assembly domain superfamily EP550_07110 IPR002744 MIP18 family-like EP550_07110 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit EP550_07115 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP550_07115 IPR036010 2Fe-2S ferredoxin-like superfamily EP550_07115 IPR012675 Beta-grasp domain superfamily EP550_07115 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain EP550_07115 IPR017927 FAD-binding domain, ferredoxin reductase-type EP550_07115 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit EP550_07115 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP550_07115 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP550_07115 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase EP550_07115 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site EP550_07115 IPR017938 Riboflavin synthase-like beta-barrel EP550_07120 IPR001753 Enoyl-CoA hydratase/isomerase EP550_07120 IPR029045 ClpP/crotonase-like domain superfamily EP550_07120 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site EP550_07120 IPR014748 Enoyl-CoA hydratase, C-terminal EP550_07125 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB EP550_07125 IPR029045 ClpP/crotonase-like domain superfamily EP550_07125 IPR001753 Enoyl-CoA hydratase/isomerase EP550_07125 IPR014748 Enoyl-CoA hydratase, C-terminal EP550_07130 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC EP550_07130 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding EP550_07130 IPR036291 NAD(P)-binding domain superfamily EP550_07130 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP550_07130 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain EP550_07130 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal EP550_07130 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site EP550_07135 IPR020616 Thiolase, N-terminal EP550_07135 IPR020617 Thiolase, C-terminal EP550_07135 IPR020610 Thiolase, active site EP550_07135 IPR020615 Thiolase, acyl-enzyme intermediate active site EP550_07135 IPR016039 Thiolase-like EP550_07135 IPR020613 Thiolase, conserved site EP550_07135 IPR012793 Beta-ketoadipyl CoA thiolase EP550_07135 IPR002155 Thiolase EP550_07140 IPR011880 Phenylacetate-CoA ligase EP550_07140 IPR042099 AMP-dependent synthetase-like superfamily EP550_07140 IPR000873 AMP-dependent synthetase/ligase EP550_07140 IPR028154 AMP-dependent ligase, C-terminal EP550_07145 IPR012906 PaaX-like, N-terminal EP550_07145 IPR013225 PaaX-like, C-terminal EP550_07145 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX EP550_07145 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07150 IPR001451 Hexapeptide repeat EP550_07150 IPR023446 Carnitine operon protein CaiE EP550_07150 IPR011004 Trimeric LpxA-like superfamily EP550_07155 IPR006683 Thioesterase domain EP550_07155 IPR029069 HotDog domain superfamily EP550_07155 IPR003736 Phenylacetic acid degradation-related domain EP550_07155 IPR011973 Phenylacetic acid degradation protein PaaD EP550_07165 IPR041471 UvrB, interaction domain EP550_07165 IPR004807 UvrABC system, subunit B EP550_07165 IPR036876 UVR domain superfamily EP550_07165 IPR006935 Helicase/UvrB, N-terminal EP550_07165 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_07165 IPR001650 Helicase, C-terminal EP550_07165 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP550_07165 IPR001943 UVR domain EP550_07165 IPR024759 UvrB, YAD/RRR-motif-containing domain EP550_07205 IPR012340 Nucleic acid-binding, OB-fold EP550_07205 IPR002059 Cold-shock protein, DNA-binding EP550_07205 IPR019844 Cold-shock (CSD) domain EP550_07205 IPR011129 Cold shock domain EP550_07205 IPR012156 Cold shock, CspA EP550_07215 IPR018060 DNA binding HTH domain, AraC-type EP550_07215 IPR009057 Homeobox-like domain superfamily EP550_07215 IPR009594 Transcription regulator HTH, AraC, N-terminal EP550_07225 IPR032874 DDE domain EP550_07225 IPR001584 Integrase, catalytic core EP550_07225 IPR012337 Ribonuclease H-like superfamily EP550_07225 IPR036397 Ribonuclease H superfamily EP550_07230 IPR009057 Homeobox-like domain superfamily EP550_07230 IPR006118 Recombinase, conserved site EP550_07230 IPR006119 Resolvase, N-terminal catalytic domain EP550_07230 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily EP550_07230 IPR006120 Resolvase, HTH domain EP550_07240 IPR010998 Integrase/recombinase, N-terminal EP550_07240 IPR011946 Integrase, integron-type EP550_07240 IPR011010 DNA breaking-rejoining enzyme, catalytic core EP550_07240 IPR013762 Integrase-like, catalytic domain superfamily EP550_07240 IPR004107 Integrase, SAM-like, N-terminal EP550_07240 IPR002104 Integrase, catalytic domain EP550_07245 IPR019646 Aminoglycoside-2''-adenylyltransferase EP550_07250 IPR025184 Domain of unknown function DUF4111 EP550_07250 IPR002934 Polymerase, nucleotidyl transferase domain EP550_07250 IPR024172 Streptomycin 3''-adenylyltransferase EP550_07255 IPR000390 Small multidrug resistance protein family EP550_07260 IPR011005 Dihydropteroate synthase-like EP550_07260 IPR000489 Pterin-binding domain EP550_07260 IPR006390 Dihydropteroate synthase EP550_07270 IPR016181 Acyl-CoA N-acyltransferase EP550_07275 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein EP550_07275 IPR001270 ClpA/B family EP550_07275 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_07275 IPR002611 IstB-like ATP-binding protein EP550_07275 IPR003593 AAA+ ATPase domain EP550_07285 IPR012337 Ribonuclease H-like superfamily EP550_07285 IPR036397 Ribonuclease H superfamily EP550_07285 IPR032874 DDE domain EP550_07285 IPR001584 Integrase, catalytic core EP550_07295 IPR014757 Transcription regulator IclR, C-terminal EP550_07295 IPR029016 GAF-like domain superfamily EP550_07295 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR EP550_07295 IPR036390 Winged helix DNA-binding domain superfamily EP550_07295 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07295 IPR005471 Transcription regulator IclR, N-terminal EP550_07300 IPR002938 FAD-binding domain EP550_07300 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_07300 IPR012733 4-hydroxybenzoate 3-monooxygenase EP550_07305 IPR000524 Transcription regulator HTH, GntR EP550_07305 IPR017722 Phosphonate utilization transcriptional regulator PhnR EP550_07305 IPR011663 UbiC transcription regulator-associated EP550_07305 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07305 IPR036390 Winged helix DNA-binding domain superfamily EP550_07305 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily EP550_07315 IPR017871 ABC transporter, conserved site EP550_07315 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal EP550_07315 IPR003439 ABC transporter-like EP550_07315 IPR003593 AAA+ ATPase domain EP550_07315 IPR013611 Transport-associated OB, type 2 EP550_07315 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 EP550_07315 IPR008995 Molybdate/tungstate binding, C-terminal EP550_07315 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_07320 IPR035906 MetI-like superfamily EP550_07320 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_07325 IPR006281 Sarcosine oxidase, monomeric EP550_07325 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_07325 IPR006076 FAD dependent oxidoreductase EP550_07330 IPR015424 Pyridoxal phosphate-dependent transferase EP550_07330 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_07330 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_07330 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase EP550_07330 IPR012703 2-aminoethylphosphonate--pyruvate transaminase EP550_07330 IPR000192 Aminotransferase class V domain EP550_07335 IPR023214 HAD superfamily EP550_07335 IPR006323 Phosphonoacetaldehyde hydrolase EP550_07335 IPR023198 Phosphoglycolate phosphatase-like, domain 2 EP550_07335 IPR041492 Haloacid dehalogenase-like hydrolase EP550_07335 IPR036412 HAD-like superfamily EP550_07335 IPR006439 HAD hydrolase, subfamily IA EP550_07340 IPR011701 Major facilitator superfamily EP550_07340 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family EP550_07340 IPR020846 Major facilitator superfamily domain EP550_07340 IPR036259 MFS transporter superfamily EP550_07340 IPR005829 Sugar transporter, conserved site EP550_07345 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_07345 IPR006089 Acyl-CoA dehydrogenase, conserved site EP550_07345 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_07345 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_07345 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_07345 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_07345 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_07350 IPR003673 CoA-transferase family III EP550_07350 IPR023606 CoA-transferase family III domain superfamily EP550_07355 IPR005471 Transcription regulator IclR, N-terminal EP550_07355 IPR014757 Transcription regulator IclR, C-terminal EP550_07355 IPR029016 GAF-like domain superfamily EP550_07355 IPR036390 Winged helix DNA-binding domain superfamily EP550_07355 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07360 IPR014748 Enoyl-CoA hydratase, C-terminal EP550_07360 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB EP550_07360 IPR001753 Enoyl-CoA hydratase/isomerase EP550_07360 IPR029045 ClpP/crotonase-like domain superfamily EP550_07365 IPR004136 Nitronate monooxygenase EP550_07365 IPR013785 Aldolase-type TIM barrel EP550_07370 IPR036259 MFS transporter superfamily EP550_07370 IPR011701 Major facilitator superfamily EP550_07370 IPR020846 Major facilitator superfamily domain EP550_07375 IPR029016 GAF-like domain superfamily EP550_07375 IPR014757 Transcription regulator IclR, C-terminal EP550_07375 IPR036390 Winged helix DNA-binding domain superfamily EP550_07375 IPR005471 Transcription regulator IclR, N-terminal EP550_07375 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07380 IPR020615 Thiolase, acyl-enzyme intermediate active site EP550_07380 IPR016039 Thiolase-like EP550_07380 IPR012793 Beta-ketoadipyl CoA thiolase EP550_07380 IPR020613 Thiolase, conserved site EP550_07380 IPR020616 Thiolase, N-terminal EP550_07380 IPR002155 Thiolase EP550_07380 IPR020610 Thiolase, active site EP550_07380 IPR020617 Thiolase, C-terminal EP550_07385 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding EP550_07385 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site EP550_07385 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC EP550_07385 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal EP550_07385 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain EP550_07385 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP550_07385 IPR036291 NAD(P)-binding domain superfamily EP550_07390 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_07390 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_07390 IPR036291 NAD(P)-binding domain superfamily EP550_07390 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase EP550_07395 IPR029045 ClpP/crotonase-like domain superfamily EP550_07395 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site EP550_07395 IPR001753 Enoyl-CoA hydratase/isomerase EP550_07395 IPR014748 Enoyl-CoA hydratase, C-terminal EP550_07400 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_07400 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_07400 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_07400 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_07400 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_07400 IPR006089 Acyl-CoA dehydrogenase, conserved site EP550_07400 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_07405 IPR011701 Major facilitator superfamily EP550_07405 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family EP550_07405 IPR020846 Major facilitator superfamily domain EP550_07405 IPR036259 MFS transporter superfamily EP550_07405 IPR005829 Sugar transporter, conserved site EP550_07410 IPR037171 NagB/RpiA transferase-like EP550_07410 IPR004163 Coenzyme A transferase binding site EP550_07410 IPR004165 Coenzyme A transferase family I EP550_07410 IPR012792 3-oxoacid CoA-transferase, subunit A EP550_07415 IPR037171 NagB/RpiA transferase-like EP550_07415 IPR004164 Coenzyme A transferase active site EP550_07415 IPR004165 Coenzyme A transferase family I EP550_07415 IPR012791 3-oxoacid CoA-transferase, subunit B EP550_07425 IPR011701 Major facilitator superfamily EP550_07425 IPR036259 MFS transporter superfamily EP550_07425 IPR020846 Major facilitator superfamily domain EP550_07435 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain EP550_07435 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_07435 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_07435 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_07435 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_07435 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_07435 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_07450 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07450 IPR036390 Winged helix DNA-binding domain superfamily EP550_07450 IPR000847 Transcription regulator HTH, LysR EP550_07450 IPR005119 LysR, substrate-binding EP550_07455 IPR027167 Hydroxymethylglutaryl-CoA lyase EP550_07455 IPR013785 Aldolase-type TIM barrel EP550_07455 IPR000891 Pyruvate carboxyltransferase EP550_07455 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site EP550_07460 IPR005482 Biotin carboxylase, C-terminal EP550_07460 IPR001882 Biotin-binding site EP550_07460 IPR011764 Biotin carboxylation domain EP550_07460 IPR005481 Biotin carboxylase-like, N-terminal domain EP550_07460 IPR000089 Biotin/lipoyl attachment EP550_07460 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain EP550_07460 IPR011761 ATP-grasp fold EP550_07460 IPR016185 Pre-ATP-grasp domain superfamily EP550_07460 IPR011054 Rudiment single hybrid motif EP550_07460 IPR011053 Single hybrid motif EP550_07465 IPR014748 Enoyl-CoA hydratase, C-terminal EP550_07465 IPR001753 Enoyl-CoA hydratase/isomerase EP550_07465 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site EP550_07465 IPR029045 ClpP/crotonase-like domain superfamily EP550_07470 IPR029045 ClpP/crotonase-like domain superfamily EP550_07470 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal EP550_07470 IPR034733 Acetyl-CoA carboxylase EP550_07470 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal EP550_07475 IPR006089 Acyl-CoA dehydrogenase, conserved site EP550_07475 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_07475 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_07475 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_07475 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_07475 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_07475 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_07480 IPR009057 Homeobox-like domain superfamily EP550_07480 IPR001647 DNA-binding HTH domain, TetR-type EP550_07485 IPR000873 AMP-dependent synthetase/ligase EP550_07485 IPR025110 AMP-binding enzyme, C-terminal domain EP550_07485 IPR020845 AMP-binding, conserved site EP550_07505 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07505 IPR036390 Winged helix DNA-binding domain superfamily EP550_07505 IPR005119 LysR, substrate-binding EP550_07505 IPR000847 Transcription regulator HTH, LysR EP550_07535 IPR001453 MoaB/Mog domain EP550_07535 IPR008135 Competence-induced protein CinA EP550_07535 IPR036425 MoaB/Mog-like domain superfamily EP550_07535 IPR036653 CinA-like, C-terminal EP550_07535 IPR008136 CinA, C-terminal EP550_07535 IPR041424 CinA, KH domain EP550_07545 IPR037060 Catalase core domain superfamily EP550_07545 IPR041399 Large catalase, C-terminal domain EP550_07545 IPR018028 Catalase, mono-functional, haem-containing EP550_07545 IPR024712 Catalase, mono-functional, haem-containing, clade 2 EP550_07545 IPR024708 Catalase active site EP550_07545 IPR020835 Catalase superfamily EP550_07545 IPR029062 Class I glutamine amidotransferase-like EP550_07545 IPR011614 Catalase core domain EP550_07545 IPR010582 Catalase immune-responsive domain EP550_07545 IPR002226 Catalase haem-binding site EP550_07550 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_07550 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_07550 IPR036291 NAD(P)-binding domain superfamily EP550_07570 IPR036286 LexA/Signal peptidase-like superfamily EP550_07570 IPR006197 Peptidase S24, LexA-like EP550_07570 IPR015927 Peptidase S24/S26A/S26B/S26C EP550_07570 IPR039418 LexA-like EP550_07580 IPR000485 AsnC-type HTH domain EP550_07580 IPR036390 Winged helix DNA-binding domain superfamily EP550_07580 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07580 IPR019888 Transcription regulator AsnC-type EP550_07580 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP550_07580 IPR011991 ArsR-like helix-turn-helix domain EP550_07580 IPR011008 Dimeric alpha-beta barrel EP550_07580 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP550_07590 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP550_07590 IPR003594 Histidine kinase/HSP90-like ATPase EP550_07590 IPR001789 Signal transduction response regulator, receiver domain EP550_07590 IPR029151 Periplasmic sensor-like domain superfamily EP550_07590 IPR011006 CheY-like superfamily EP550_07590 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP550_07590 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_07590 IPR005467 Histidine kinase domain EP550_07590 IPR035965 PAS domain superfamily EP550_07590 IPR015387 LuxQ, periplasmic EP550_07590 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP550_07595 IPR001789 Signal transduction response regulator, receiver domain EP550_07595 IPR037522 HD-GYP domain EP550_07595 IPR011006 CheY-like superfamily EP550_07595 IPR003607 HD/PDEase domain EP550_07610 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_07610 IPR035906 MetI-like superfamily EP550_07610 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain EP550_07615 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain EP550_07615 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_07615 IPR035906 MetI-like superfamily EP550_07620 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type EP550_07620 IPR003439 ABC transporter-like EP550_07620 IPR017871 ABC transporter, conserved site EP550_07620 IPR003593 AAA+ ATPase domain EP550_07620 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_07625 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP550_07625 IPR018313 Solute-binding protein family 3, conserved site EP550_07630 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP550_07630 IPR018313 Solute-binding protein family 3, conserved site EP550_07630 IPR001320 Ionotropic glutamate receptor EP550_07640 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07640 IPR036390 Winged helix DNA-binding domain superfamily EP550_07640 IPR000847 Transcription regulator HTH, LysR EP550_07640 IPR005119 LysR, substrate-binding EP550_07645 IPR004778 Homoserine/Threonine efflux protein EP550_07645 IPR001123 Amino acid exporter protein, LeuE-type EP550_07655 IPR010970 Cysteine desulfurase, SufS EP550_07655 IPR015424 Pyridoxal phosphate-dependent transferase EP550_07655 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_07655 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_07655 IPR000192 Aminotransferase class V domain EP550_07665 IPR001451 Hexapeptide repeat EP550_07665 IPR042122 Serine acetyltransferase, N-terminal domain superfamily EP550_07665 IPR011004 Trimeric LpxA-like superfamily EP550_07670 IPR001763 Rhodanese-like domain EP550_07670 IPR036873 Rhodanese-like domain superfamily EP550_07670 IPR023695 Thiosulfate sulfurtransferase, bacterial EP550_07675 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_07675 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_07675 IPR036291 NAD(P)-binding domain superfamily EP550_07675 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase EP550_07680 IPR036390 Winged helix DNA-binding domain superfamily EP550_07680 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07680 IPR000847 Transcription regulator HTH, LysR EP550_07680 IPR005119 LysR, substrate-binding EP550_07685 IPR040079 Glutathione Transferase family EP550_07685 IPR036249 Thioredoxin-like superfamily EP550_07685 IPR004045 Glutathione S-transferase, N-terminal EP550_07685 IPR010987 Glutathione S-transferase, C-terminal-like EP550_07685 IPR036282 Glutathione S-transferase, C-terminal domain superfamily EP550_07690 IPR010987 Glutathione S-transferase, C-terminal-like EP550_07690 IPR036282 Glutathione S-transferase, C-terminal domain superfamily EP550_07690 IPR036249 Thioredoxin-like superfamily EP550_07690 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal EP550_07690 IPR040079 Glutathione Transferase family EP550_07690 IPR004045 Glutathione S-transferase, N-terminal EP550_07695 IPR036390 Winged helix DNA-binding domain superfamily EP550_07695 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07695 IPR000847 Transcription regulator HTH, LysR EP550_07695 IPR005119 LysR, substrate-binding EP550_07700 IPR023760 Holin-like protein CidA EP550_07700 IPR005538 LrgA/CidA family EP550_07705 IPR007300 CidB/LrgB family EP550_07705 IPR005261 Conserved hypothetical protein CHP00659 EP550_07710 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07710 IPR015424 Pyridoxal phosphate-dependent transferase EP550_07710 IPR004839 Aminotransferase, class I/classII EP550_07710 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_07710 IPR036390 Winged helix DNA-binding domain superfamily EP550_07710 IPR000524 Transcription regulator HTH, GntR EP550_07725 IPR011701 Major facilitator superfamily EP550_07725 IPR036259 MFS transporter superfamily EP550_07725 IPR020846 Major facilitator superfamily domain EP550_07730 IPR037171 NagB/RpiA transferase-like EP550_07730 IPR005777 Acetyl-S-ACP:malonate ACP transferase EP550_07735 IPR017555 Triphosphoribosyl-dephospho-CoA synthase EP550_07735 IPR002736 Triphosphoribosyl-dephospho-CoA protein EP550_07740 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein EP550_07740 IPR009662 Malonate decarboxylase delta subunit EP550_07745 IPR017556 Biotin-independent malonate decarboxylase, beta subunit EP550_07745 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal EP550_07745 IPR034733 Acetyl-CoA carboxylase EP550_07745 IPR029045 ClpP/crotonase-like domain superfamily EP550_07750 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit EP550_07750 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal EP550_07750 IPR029045 ClpP/crotonase-like domain superfamily EP550_07755 IPR017557 Phosphoribosyl-dephospho-CoA transferase EP550_07760 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase EP550_07760 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding EP550_07760 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type EP550_07760 IPR024925 Malonyl CoA-acyl carrier protein transacylase EP550_07760 IPR014043 Acyl transferase EP550_07760 IPR001227 Acyl transferase domain superfamily EP550_07775 IPR036390 Winged helix DNA-binding domain superfamily EP550_07775 IPR000847 Transcription regulator HTH, LysR EP550_07775 IPR037400 Malonate utilization transcriptional regulator, PBP2 domain EP550_07775 IPR005119 LysR, substrate-binding EP550_07775 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07780 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07780 IPR000524 Transcription regulator HTH, GntR EP550_07780 IPR004839 Aminotransferase, class I/classII EP550_07780 IPR036390 Winged helix DNA-binding domain superfamily EP550_07780 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_07780 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_07780 IPR015424 Pyridoxal phosphate-dependent transferase EP550_07790 IPR003317 Cytochrome ubiquinol oxidase subunit 2 EP550_07795 IPR002585 Cytochrome ubiquinol oxidase subunit 1 EP550_07810 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_07810 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_07810 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain EP550_07810 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_07810 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_07810 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_07815 IPR036661 Luciferase-like domain superfamily EP550_07815 IPR011251 Luciferase-like domain EP550_07815 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A EP550_07820 IPR005828 Major facilitator, sugar transporter-like EP550_07820 IPR020846 Major facilitator superfamily domain EP550_07820 IPR005829 Sugar transporter, conserved site EP550_07820 IPR036259 MFS transporter superfamily EP550_07840 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain EP550_07840 IPR010068 Taurine ABC transporter, substrate-binding protein TauA EP550_07840 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP550_07845 IPR003593 AAA+ ATPase domain EP550_07845 IPR017871 ABC transporter, conserved site EP550_07845 IPR015859 ABC transporter, taurine import, TauD EP550_07845 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_07845 IPR003439 ABC transporter-like EP550_07850 IPR035906 MetI-like superfamily EP550_07850 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_07855 IPR003819 TauD/TfdA-like domain EP550_07855 IPR042098 Taurine dioxygenase TauD-like superfamily EP550_07860 IPR015942 Asp/Glu/hydantoin racemase EP550_07865 IPR038271 Purine-cytosine permease superfamily EP550_07865 IPR012681 Nucleobase cation symporter-1, NCS1 EP550_07865 IPR001248 Purine-cytosine permease EP550_07875 IPR036390 Winged helix DNA-binding domain superfamily EP550_07875 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07875 IPR000847 Transcription regulator HTH, LysR EP550_07875 IPR005119 LysR, substrate-binding EP550_07885 IPR006679 Adenine deaminase EP550_07885 IPR006680 Amidohydrolase-related EP550_07885 IPR011059 Metal-dependent hydrolase, composite domain superfamily EP550_07885 IPR026912 Adenine deaminase C-terminal domain EP550_07885 IPR032466 Metal-dependent hydrolase EP550_07895 IPR006659 Arsenate reductase EP550_07895 IPR036249 Thioredoxin-like superfamily EP550_07895 IPR006660 Arsenate reductase-like EP550_07900 IPR036390 Winged helix DNA-binding domain superfamily EP550_07900 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07900 IPR001845 HTH ArsR-type DNA-binding domain EP550_07900 IPR011991 ArsR-like helix-turn-helix domain EP550_07905 IPR038770 Sodium/solute symporter superfamily EP550_07905 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 EP550_07905 IPR004706 Arsenical-resistance protein Acr3 EP550_07910 IPR005119 LysR, substrate-binding EP550_07910 IPR036390 Winged helix DNA-binding domain superfamily EP550_07910 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_07910 IPR000847 Transcription regulator HTH, LysR EP550_07925 IPR036249 Thioredoxin-like superfamily EP550_07925 IPR012336 Thioredoxin-like fold EP550_07925 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site EP550_07925 IPR002109 Glutaredoxin EP550_07925 IPR023753 FAD/NAD(P)-binding domain EP550_07925 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_07925 IPR012081 Alkyl hydroperoxide reductase subunit F EP550_07940 IPR011004 Trimeric LpxA-like superfamily EP550_07940 IPR005881 Serine O-acetyltransferase EP550_07940 IPR001451 Hexapeptide repeat EP550_07940 IPR042122 Serine acetyltransferase, N-terminal domain superfamily EP550_07940 IPR018357 Hexapeptide transferase, conserved site EP550_07945 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal EP550_07945 IPR029028 Alpha/beta knot methyltransferases EP550_07945 IPR004384 RNA methyltransferase TrmJ/LasT EP550_07945 IPR001537 tRNA/rRNA methyltransferase, SpoU type EP550_07950 IPR029460 DNA polymerase, helix-hairpin-helix motif EP550_07950 IPR004805 DNA polymerase III, alpha subunit EP550_07950 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain EP550_07950 IPR016195 Polymerase/histidinol phosphatase-like EP550_07950 IPR003141 Polymerase/histidinol phosphatase, N-terminal EP550_07950 IPR004013 PHP domain EP550_07950 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type EP550_07950 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain EP550_07950 IPR040982 DNA polymerase III alpha subunit finger domain EP550_07955 IPR027475 Asparaginase/glutaminase, active site 2 EP550_07955 IPR020827 Asparaginase/glutaminase, active site 1 EP550_07955 IPR040919 Asparaginase/glutaminase, C-terminal EP550_07955 IPR037152 L-asparaginase, N-terminal domain superfamily EP550_07955 IPR004550 L-asparaginase, type II EP550_07955 IPR036152 Asparaginase/glutaminase-like superfamily EP550_07955 IPR006034 Asparaginase/glutaminase-like EP550_07955 IPR027473 L-asparaginase, C-terminal EP550_07955 IPR027474 L-asparaginase, N-terminal EP550_07960 IPR023954 C4-dicarboxylate transport protein EP550_07960 IPR001991 Sodium:dicarboxylate symporter EP550_07960 IPR018107 Sodium:dicarboxylate symporter, conserved site EP550_07960 IPR036458 Sodium:dicarboxylate symporter superfamily EP550_07965 IPR025668 Transposase DDE domain EP550_07970 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_07970 IPR015424 Pyridoxal phosphate-dependent transferase EP550_07970 IPR004839 Aminotransferase, class I/classII EP550_07970 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_07975 IPR002579 Peptide methionine sulphoxide reductase MrsB EP550_07975 IPR011057 Mss4-like superfamily EP550_07975 IPR028427 Peptide methionine sulfoxide reductase EP550_07980 IPR000889 Glutathione peroxidase EP550_07980 IPR029759 Glutathione peroxidase active site EP550_07980 IPR029760 Glutathione peroxidase conserved site EP550_07980 IPR036249 Thioredoxin-like superfamily EP550_07985 IPR011051 RmlC-like cupin domain superfamily EP550_07985 IPR018060 DNA binding HTH domain, AraC-type EP550_07985 IPR032783 AraC-type transcription regulator, ligand-binding domain EP550_07985 IPR009057 Homeobox-like domain superfamily EP550_07985 IPR020449 Transcription regulator HTH, AraC- type EP550_07985 IPR014710 RmlC-like jelly roll fold EP550_07995 IPR004839 Aminotransferase, class I/classII EP550_07995 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_07995 IPR015424 Pyridoxal phosphate-dependent transferase EP550_07995 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_07995 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ EP550_08000 IPR002912 ACT domain EP550_08000 IPR002934 Polymerase, nucleotidyl transferase domain EP550_08000 IPR003607 HD/PDEase domain EP550_08000 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase EP550_08000 IPR006674 HD domain EP550_08000 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme EP550_08005 IPR011054 Rudiment single hybrid motif EP550_08005 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase EP550_08005 IPR011761 ATP-grasp fold EP550_08005 IPR016185 Pre-ATP-grasp domain superfamily EP550_08005 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type EP550_08005 IPR013815 ATP-grasp fold, subdomain 1 EP550_08015 IPR008407 Branched-chain amino acid transport, AzlD EP550_08020 IPR011606 Branched-chain amino acid transport, permease EP550_08045 IPR041706 YchF, N-terminal EP550_08045 IPR006073 GTP binding domain EP550_08045 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_08045 IPR004095 TGS EP550_08045 IPR012676 TGS-like EP550_08045 IPR012675 Beta-grasp domain superfamily EP550_08045 IPR031167 OBG-type guanine nucleotide-binding (G) domain EP550_08045 IPR023192 TGS-like domain superfamily EP550_08045 IPR013029 YchF, C-terminal domain EP550_08045 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 EP550_08050 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_08050 IPR035906 MetI-like superfamily EP550_08055 IPR003593 AAA+ ATPase domain EP550_08055 IPR026253 Methionine import ATP-binding protein MetN EP550_08055 IPR003439 ABC transporter-like EP550_08055 IPR017871 ABC transporter, conserved site EP550_08055 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal EP550_08055 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain EP550_08055 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_08055 IPR018449 NIL domain EP550_08060 IPR004872 Lipoprotein NlpA family EP550_08065 IPR004872 Lipoprotein NlpA family EP550_08070 IPR036661 Luciferase-like domain superfamily EP550_08070 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A EP550_08070 IPR011251 Luciferase-like domain EP550_08080 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_08080 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_08080 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain EP550_08080 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_08080 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_08095 IPR035906 MetI-like superfamily EP550_08095 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain EP550_08095 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ EP550_08095 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_08100 IPR035906 MetI-like superfamily EP550_08100 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_08100 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM EP550_08100 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain EP550_08105 IPR003439 ABC transporter-like EP550_08105 IPR017871 ABC transporter, conserved site EP550_08105 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_08105 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type EP550_08105 IPR003593 AAA+ ATPase domain EP550_08115 IPR036390 Winged helix DNA-binding domain superfamily EP550_08115 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_08115 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP550_08115 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP550_08115 IPR019888 Transcription regulator AsnC-type EP550_08115 IPR011008 Dimeric alpha-beta barrel EP550_08115 IPR000485 AsnC-type HTH domain EP550_08115 IPR011991 ArsR-like helix-turn-helix domain EP550_08120 IPR026564 Transcriptional regulator TACO1-like, domain 3 EP550_08120 IPR029072 YebC-like EP550_08120 IPR017856 Integrase-like, N-terminal EP550_08120 IPR002876 Transcriptional regulator TACO1-like EP550_08130 IPR001647 DNA-binding HTH domain, TetR-type EP550_08130 IPR009057 Homeobox-like domain superfamily EP550_08130 IPR023772 DNA-binding HTH domain, TetR-type, conserved site EP550_08150 IPR025668 Transposase DDE domain EP550_08160 IPR005119 LysR, substrate-binding EP550_08160 IPR036390 Winged helix DNA-binding domain superfamily EP550_08160 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_08160 IPR000847 Transcription regulator HTH, LysR EP550_08170 IPR038271 Purine-cytosine permease superfamily EP550_08170 IPR026030 Purine-cytosine permease Fcy2/21/22 EP550_08170 IPR001248 Purine-cytosine permease EP550_08180 IPR000620 EamA domain EP550_08210 IPR018030 Fimbrial membrane usher, conserved site EP550_08210 IPR000015 Outer membrane usher protein EP550_08210 IPR042186 Outer membrane usher protein FimD, plug domain EP550_08210 IPR025949 PapC-like, C-terminal domain EP550_08210 IPR025885 PapC, N-terminal domain EP550_08210 IPR037224 PapC, N-terminal domain superfamily EP550_08215 IPR013783 Immunoglobulin-like fold EP550_08215 IPR008962 PapD-like superfamily EP550_08215 IPR036316 Pili assembly chaperone, C-terminal domain superfamily EP550_08215 IPR001829 Pili assembly chaperone, bacterial EP550_08215 IPR016147 Pili assembly chaperone, N-terminal EP550_08215 IPR016148 Pili assembly chaperone, C-terminal EP550_08215 IPR018046 Pili assembly chaperone, conserved site EP550_08220 IPR036937 Fimbrial-type adhesion domain superfamily EP550_08220 IPR008966 Adhesion domain superfamily EP550_08220 IPR039458 FimA-like EP550_08235 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB EP550_08235 IPR007197 Radical SAM EP550_08235 IPR006638 Elp3/MiaB/NifB EP550_08235 IPR024177 Biotin synthase EP550_08235 IPR010722 Biotin and thiamin synthesis-associated domain EP550_08235 IPR013785 Aldolase-type TIM barrel EP550_08240 IPR004453 Epoxyqueuosine reductase QueG EP550_08240 IPR009051 Alpha-helical ferredoxin EP550_08240 IPR013542 Domain of unknown function DUF1730 EP550_08240 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site EP550_08240 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain EP550_08245 IPR029056 Ribokinase-like EP550_08245 IPR004443 YjeF N-terminal domain EP550_08245 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr EP550_08245 IPR036652 YjeF N-terminal domain superfamily EP550_08245 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase EP550_08250 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site EP550_08250 IPR036397 Ribonuclease H superfamily EP550_08250 IPR012337 Ribonuclease H-like superfamily EP550_08250 IPR002176 Crossover junction endodeoxyribonuclease RuvC EP550_08260 IPR016181 Acyl-CoA N-acyltransferase EP550_08260 IPR000182 GNAT domain EP550_08265 IPR012338 Beta-lactamase/transpeptidase-like EP550_08265 IPR001460 Penicillin-binding protein, transpeptidase EP550_08290 IPR022636 S-adenosylmethionine synthetase superfamily EP550_08290 IPR022628 S-adenosylmethionine synthetase, N-terminal EP550_08290 IPR022630 S-adenosylmethionine synthetase, C-terminal EP550_08290 IPR022629 S-adenosylmethionine synthetase, central domain EP550_08290 IPR022631 S-adenosylmethionine synthetase, conserved site EP550_08290 IPR002133 S-adenosylmethionine synthetase EP550_08295 IPR029061 Thiamin diphosphate-binding fold EP550_08295 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II EP550_08295 IPR005474 Transketolase, N-terminal EP550_08295 IPR020826 Transketolase binding site EP550_08295 IPR033248 Transketolase, C-terminal domain EP550_08295 IPR033247 Transketolase family EP550_08295 IPR005478 Transketolase, bacterial-like EP550_08295 IPR005475 Transketolase-like, pyrimidine-binding domain EP550_08305 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily EP550_08305 IPR023480 Uncharacterised protein family UPF0312/YceI EP550_08305 IPR007372 Lipid/polyisoprenoid-binding, YceI-like EP550_08315 IPR018711 Phosphodiester glycosidase EP550_08325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_08325 IPR030391 RNA methyltransferase TrmA, conserved site EP550_08325 IPR030390 RNA methyltransferase TrmA, active site EP550_08325 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA EP550_08325 IPR010280 (Uracil-5)-methyltransferase family EP550_08330 IPR007344 GrpB/Dephospho-CoA kinase EP550_08335 IPR016161 Aldehyde/histidinol dehydrogenase EP550_08335 IPR016160 Aldehyde dehydrogenase, cysteine active site EP550_08335 IPR010985 Ribbon-helix-helix EP550_08335 IPR002872 Proline dehydrogenase domain EP550_08335 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP550_08335 IPR024082 Proline dehydrogenase PutA, domain II EP550_08335 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_08335 IPR024089 Proline dehydrogenase PutA, domain I/II EP550_08335 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain EP550_08335 IPR029041 FAD-linked oxidoreductase-like EP550_08335 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 EP550_08335 IPR025703 Bifunctional protein PutA EP550_08335 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_08335 IPR013321 Arc-type ribbon-helix-helix EP550_08335 IPR024090 Proline dehydrogenase PutA, domain I EP550_08335 IPR015590 Aldehyde dehydrogenase domain EP550_08340 IPR036390 Winged helix DNA-binding domain superfamily EP550_08340 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_08340 IPR011991 ArsR-like helix-turn-helix domain EP550_08340 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP550_08340 IPR011008 Dimeric alpha-beta barrel EP550_08340 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP550_08340 IPR000485 AsnC-type HTH domain EP550_08340 IPR019888 Transcription regulator AsnC-type EP550_08345 IPR011851 Sodium/proline symporter EP550_08345 IPR038377 Sodium/glucose symporter superfamily EP550_08345 IPR018212 Sodium/solute symporter, conserved site EP550_08345 IPR001734 Sodium/solute symporter EP550_08350 IPR003000 Sirtuin family EP550_08350 IPR026591 Sirtuin, catalytic core small domain superfamily EP550_08350 IPR029035 DHS-like NAD/FAD-binding domain superfamily EP550_08350 IPR026590 Sirtuin family, catalytic core domain EP550_08350 IPR027546 Sirtuin, class III EP550_08355 IPR033753 Glycine cleavage system H-protein/Simiate EP550_08355 IPR002930 Glycine cleavage system H-protein EP550_08355 IPR000089 Biotin/lipoyl attachment EP550_08355 IPR017453 Glycine cleavage system H-protein, subgroup EP550_08355 IPR011053 Single hybrid motif EP550_08355 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site EP550_08360 IPR018060 DNA binding HTH domain, AraC-type EP550_08360 IPR009057 Homeobox-like domain superfamily EP550_08360 IPR020449 Transcription regulator HTH, AraC- type EP550_08360 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal EP550_08370 IPR039421 Type I protein exporter EP550_08370 IPR003593 AAA+ ATPase domain EP550_08370 IPR036640 ABC transporter type 1, transmembrane domain superfamily EP550_08370 IPR017871 ABC transporter, conserved site EP550_08370 IPR011527 ABC transporter type 1, transmembrane domain EP550_08370 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_08370 IPR003439 ABC transporter-like EP550_08375 IPR018636 Protein of unknown function DUF2058 EP550_08380 IPR010699 Protein of unknown function DUF1275 EP550_08385 IPR023025 Serine/threonine transporter SstT EP550_08385 IPR036458 Sodium:dicarboxylate symporter superfamily EP550_08385 IPR001991 Sodium:dicarboxylate symporter EP550_08390 IPR001845 HTH ArsR-type DNA-binding domain EP550_08390 IPR036390 Winged helix DNA-binding domain superfamily EP550_08390 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_08390 IPR011991 ArsR-like helix-turn-helix domain EP550_08400 IPR039994 JmjC domain-containing EP550_08400 IPR003347 JmjC domain EP550_08405 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein EP550_08405 IPR029001 Inosine triphosphate pyrophosphatase-like EP550_08415 IPR015911 Phosphoglycerate kinase, conserved site EP550_08415 IPR015824 Phosphoglycerate kinase, N-terminal EP550_08415 IPR001576 Phosphoglycerate kinase EP550_08415 IPR036043 Phosphoglycerate kinase superfamily EP550_08425 IPR013785 Aldolase-type TIM barrel EP550_08425 IPR000771 Fructose-bisphosphate aldolase, class-II EP550_08425 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype EP550_08430 IPR023034 Peptidyl-prolyl isomerase SurA EP550_08430 IPR015391 SurA N-terminal EP550_08430 IPR027304 Trigger factor/SurA domain superfamily EP550_08430 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type EP550_08435 IPR007543 LptD, C-terminal EP550_08435 IPR020889 LPS-assembly protein LptD EP550_08435 IPR005653 Organic solvent tolerance-like, N-terminal EP550_08440 IPR011009 Protein kinase-like domain superfamily EP550_08440 IPR002575 Aminoglycoside phosphotransferase EP550_08445 IPR005835 Nucleotidyl transferase domain EP550_08445 IPR029044 Nucleotide-diphospho-sugar transferases EP550_08450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_08450 IPR003682 rRNA small subunit methyltransferase G EP550_08455 IPR025669 AAA domain EP550_08455 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_08460 IPR036086 ParB/Sulfiredoxin superfamily EP550_08460 IPR041468 ParB/Spo0J, HTH domain EP550_08460 IPR004437 ParB/RepB/Spo0J partition protein EP550_08460 IPR003115 ParB/Sulfiredoxin EP550_08465 IPR002898 MotA/TolQ/ExbB proton channel EP550_08475 IPR039421 Type I protein exporter EP550_08475 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_08475 IPR003593 AAA+ ATPase domain EP550_08475 IPR011527 ABC transporter type 1, transmembrane domain EP550_08475 IPR011917 ABC transporter, lipid A export, MsbA EP550_08475 IPR017871 ABC transporter, conserved site EP550_08475 IPR003439 ABC transporter-like EP550_08475 IPR036640 ABC transporter type 1, transmembrane domain superfamily EP550_08480 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_08480 IPR003758 Tetraacyldisaccharide 4'-kinase EP550_08485 IPR029044 Nucleotide-diphospho-sugar transferases EP550_08485 IPR003329 Acylneuraminate cytidylyltransferase EP550_08485 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase EP550_08490 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_08490 IPR004622 DNA polymerase III, delta prime subunit EP550_08490 IPR015199 DNA polymerase III, delta subunit, C-terminal EP550_08500 IPR032466 Metal-dependent hydrolase EP550_08500 IPR015991 Uncharacterised hydrolase TatD-type EP550_08500 IPR001130 TatD family EP550_08500 IPR018228 Deoxyribonuclease, TatD-related, conserved site EP550_08515 IPR012902 Prokaryotic N-terminal methylation site EP550_08515 IPR010052 Type II secretion system protein I EP550_08515 IPR003413 Type II secretion system protein I domain EP550_08520 IPR012902 Prokaryotic N-terminal methylation site EP550_08520 IPR010055 Type II secretion system protein J EP550_08525 IPR005628 General secretion pathway protein K EP550_08525 IPR038072 GspK, central domain superfamily EP550_08535 IPR018085 Uracil-DNA glycosylase, active site EP550_08535 IPR005122 Uracil-DNA glycosylase-like EP550_08535 IPR036895 Uracil-DNA glycosylase-like domain superfamily EP550_08535 IPR002043 Uracil-DNA glycosylase family 1 EP550_08545 IPR028883 tRNA-specific adenosine deaminase EP550_08545 IPR016193 Cytidine deaminase-like EP550_08545 IPR002125 Cytidine and deoxycytidylate deaminase domain EP550_08545 IPR016192 APOBEC/CMP deaminase, zinc-binding EP550_08555 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_08555 IPR003136 Cytidylate kinase EP550_08555 IPR011994 Cytidylate kinase domain EP550_08560 IPR012340 Nucleic acid-binding, OB-fold EP550_08560 IPR022967 RNA-binding domain, S1 EP550_08560 IPR003029 S1 domain EP550_08560 IPR000110 Ribosomal protein S1 EP550_08565 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily EP550_08565 IPR000119 Histone-like DNA-binding protein EP550_08565 IPR020816 Histone-like DNA-binding protein, conserved site EP550_08565 IPR005685 Integration host factor, beta subunit EP550_08575 IPR014732 Orotidine 5'-phosphate decarboxylase EP550_08575 IPR001754 Orotidine 5'-phosphate decarboxylase domain EP550_08575 IPR011060 Ribulose-phosphate binding barrel EP550_08575 IPR013785 Aldolase-type TIM barrel EP550_08575 IPR018089 Orotidine 5'-phosphate decarboxylase, active site EP550_08585 IPR020946 Flavin monooxygenase-like EP550_08585 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_08595 IPR005654 ATPase, AFG1-like EP550_08595 IPR030870 Cell division protein ZapE EP550_08595 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_08600 IPR010998 Integrase/recombinase, N-terminal EP550_08600 IPR004107 Integrase, SAM-like, N-terminal EP550_08600 IPR023009 Tyrosine recombinase XerC/XerD EP550_08600 IPR011010 DNA breaking-rejoining enzyme, catalytic core EP550_08600 IPR013762 Integrase-like, catalytic domain superfamily EP550_08600 IPR002104 Integrase, catalytic domain EP550_08600 IPR011931 Tyrosine recombinase XerC EP550_08665 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_08665 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal EP550_08665 IPR007693 DNA helicase, DnaB-like, N-terminal EP550_08665 IPR007694 DNA helicase, DnaB-like, C-terminal EP550_08665 IPR007692 DNA helicase, DnaB type EP550_08665 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily EP550_08665 IPR003593 AAA+ ATPase domain EP550_08740 IPR006944 Bacteriophage/Gene transfer agent portal protein EP550_08795 IPR008258 Transglycosylase SLT domain 1 EP550_08795 IPR000189 Prokaryotic transglycosylase, active site EP550_08795 IPR023346 Lysozyme-like domain superfamily EP550_08795 IPR011055 Duplicated hybrid motif EP550_08795 IPR010090 Phage tail tape measure protein EP550_08795 IPR016047 Peptidase M23 EP550_08850 IPR006253 Malate synthase G EP550_08850 IPR001465 Malate synthase EP550_08850 IPR023310 Malate synthase G, beta sub-domain EP550_08850 IPR011076 Malate synthase-like superfamily EP550_08860 IPR003400 Biopolymer transport protein ExbD/TolR EP550_08865 IPR003400 Biopolymer transport protein ExbD/TolR EP550_08870 IPR002898 MotA/TolQ/ExbB proton channel EP550_08880 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_08880 IPR012910 TonB-dependent receptor, plug domain EP550_08880 IPR039426 Vitamin B12 transporter BtuB-like EP550_08880 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_08880 IPR010101 TonB-dependent vitamin B12 transporter BtuB EP550_08880 IPR010917 TonB-dependent receptor, conserved site EP550_08880 IPR010916 TonB box, conserved site EP550_08880 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP550_08900 IPR001567 Peptidase M3A/M3B catalytic domain EP550_08900 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 EP550_08905 IPR035906 MetI-like superfamily EP550_08905 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_08910 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_08910 IPR035906 MetI-like superfamily EP550_08915 IPR003439 ABC transporter-like EP550_08915 IPR003593 AAA+ ATPase domain EP550_08915 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_08915 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal EP550_08915 IPR017871 ABC transporter, conserved site EP550_08930 IPR020583 Inositol monophosphatase, metal-binding site EP550_08930 IPR000760 Inositol monophosphatase-like EP550_08930 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ EP550_08930 IPR020550 Inositol monophosphatase, conserved site EP550_08940 IPR002583 Ribosomal protein S20 EP550_08940 IPR036510 Ribosomal protein S20 superfamily EP550_08945 IPR036291 NAD(P)-binding domain superfamily EP550_08945 IPR000534 Semialdehyde dehydrogenase, NAD-binding EP550_08945 IPR016040 NAD(P)-binding domain EP550_08950 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily EP550_08950 IPR010203 Regulator of ribonuclease activity A EP550_08950 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein EP550_08970 IPR041471 UvrB, interaction domain EP550_08970 IPR005118 Transcription-repair-coupling factor, C-terminal domain EP550_08970 IPR004576 Transcription-repair coupling factor EP550_08970 IPR001650 Helicase, C-terminal EP550_08970 IPR037235 TRCF-like, C-terminal domain EP550_08970 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP550_08970 IPR011545 DEAD/DEAH box helicase domain EP550_08970 IPR003711 CarD-like/TRCF domain EP550_08970 IPR036101 CarD-like/TRCF domain superfamily EP550_08970 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_08980 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase EP550_08980 IPR029787 Nucleotide cyclase EP550_08985 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria EP550_08985 IPR018298 Adrenodoxin, iron-sulphur binding site EP550_08985 IPR001055 Adrenodoxin EP550_08985 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP550_08985 IPR036010 2Fe-2S ferredoxin-like superfamily EP550_08985 IPR012675 Beta-grasp domain superfamily EP550_08990 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily EP550_08990 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily EP550_08990 IPR042039 HscA chaperone, nucleotide-binding domain EP550_08990 IPR010236 ISC system FeS cluster assembly, HscA chaperone EP550_08990 IPR013126 Heat shock protein 70 family EP550_08990 IPR018181 Heat shock protein 70, conserved site EP550_08995 IPR004640 Co-chaperone Hsc20 EP550_08995 IPR036386 HscB, C-terminal domain superfamily EP550_08995 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain EP550_08995 IPR036869 Chaperone J-domain superfamily EP550_08995 IPR001623 DnaJ domain EP550_09000 IPR000361 FeS cluster biogenesis EP550_09000 IPR035903 HesB-like domain superfamily EP550_09000 IPR017870 FeS cluster insertion, C-terminal, conserved site EP550_09000 IPR016092 FeS cluster insertion protein EP550_09000 IPR011302 Iron-binding protein IscA, proteobacteria EP550_09005 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal EP550_09005 IPR011339 ISC system FeS cluster assembly, IscU scaffold EP550_09010 IPR010240 Cysteine desulfurase IscS EP550_09010 IPR016454 Cysteine desulfurase EP550_09010 IPR015424 Pyridoxal phosphate-dependent transferase EP550_09010 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_09010 IPR000192 Aminotransferase class V domain EP550_09010 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site EP550_09010 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_09015 IPR036390 Winged helix DNA-binding domain superfamily EP550_09015 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_09015 IPR000944 Transcription regulator Rrf2-type EP550_09015 IPR030489 Transcription regulator Rrf2-type, conserved site EP550_09015 IPR010242 Transcription factor HTH, IscR EP550_09030 IPR020816 Histone-like DNA-binding protein, conserved site EP550_09030 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily EP550_09030 IPR000119 Histone-like DNA-binding protein EP550_09035 IPR027304 Trigger factor/SurA domain superfamily EP550_09035 IPR023034 Peptidyl-prolyl isomerase SurA EP550_09035 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site EP550_09035 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type EP550_09035 IPR015391 SurA N-terminal EP550_09040 IPR009057 Homeobox-like domain superfamily EP550_09040 IPR018060 DNA binding HTH domain, AraC-type EP550_09040 IPR014710 RmlC-like jelly roll fold EP550_09040 IPR011051 RmlC-like cupin domain superfamily EP550_09040 IPR020449 Transcription regulator HTH, AraC- type EP550_09040 IPR032783 AraC-type transcription regulator, ligand-binding domain EP550_09040 IPR018062 HTH domain AraC-type, conserved site EP550_09045 IPR005804 Fatty acid desaturase domain EP550_09045 IPR033885 Alkane/xylene monooxygenase EP550_09050 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_09050 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_09050 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_09050 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_09050 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_09050 IPR006089 Acyl-CoA dehydrogenase, conserved site EP550_09050 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_09055 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_09055 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_09055 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_09055 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_09055 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_09055 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_09055 IPR006089 Acyl-CoA dehydrogenase, conserved site EP550_09060 IPR011009 Protein kinase-like domain superfamily EP550_09060 IPR004147 UbiB domain EP550_09070 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC EP550_09070 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain EP550_09070 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily EP550_09075 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like EP550_09075 IPR022770 Ferric iron reductase FhuF domain EP550_09075 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal EP550_09080 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase EP550_09080 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_09080 IPR031043 Putative histamine N-monooxygenase EP550_09085 IPR036259 MFS transporter superfamily EP550_09085 IPR011701 Major facilitator superfamily EP550_09085 IPR020846 Major facilitator superfamily domain EP550_09085 IPR004638 Drug resistance transporter EmrB-like EP550_09090 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal EP550_09090 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like EP550_09090 IPR022770 Ferric iron reductase FhuF domain EP550_09095 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal EP550_09095 IPR022770 Ferric iron reductase FhuF domain EP550_09095 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like EP550_09110 IPR010105 TonB-dependent siderophore receptor EP550_09110 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP550_09110 IPR010916 TonB box, conserved site EP550_09110 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_09110 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_09110 IPR012910 TonB-dependent receptor, plug domain EP550_09110 IPR039426 Vitamin B12 transporter BtuB-like EP550_09110 IPR010917 TonB-dependent receptor, conserved site EP550_09150 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase EP550_09150 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_09155 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic EP550_09155 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal EP550_09155 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like EP550_09155 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily EP550_09170 IPR003805 Adenosylcobinamide-GDP ribazoletransferase EP550_09175 IPR013785 Aldolase-type TIM barrel EP550_09175 IPR006218 DAHP synthetase I/KDSA EP550_09175 IPR006219 DHAP synthase, class 1 EP550_09180 IPR002781 Transmembrane protein TauE-like EP550_09200 IPR010105 TonB-dependent siderophore receptor EP550_09200 IPR010917 TonB-dependent receptor, conserved site EP550_09200 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP550_09200 IPR010916 TonB box, conserved site EP550_09200 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_09200 IPR039423 TonB-dependent receptor-like EP550_09200 IPR012910 TonB-dependent receptor, plug domain EP550_09200 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_09205 IPR003835 Glycosyl transferase, family 19 EP550_09215 IPR039552 Transposase IS66, C-terminal EP550_09215 IPR004291 Transposase, IS66 EP550_09215 IPR024463 Transposase TnpC, homeodomain EP550_09215 IPR024474 Zinc-finger binding domain of transposase IS66 EP550_09235 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain EP550_09240 IPR003593 AAA+ ATPase domain EP550_09240 IPR003439 ABC transporter-like EP550_09240 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_09240 IPR017871 ABC transporter, conserved site EP550_09245 IPR000412 ABC-2 transporter EP550_09250 IPR000412 ABC-2 transporter EP550_09275 IPR011146 HIT-like domain EP550_09275 IPR039384 HINT family EP550_09275 IPR001310 Histidine triad (HIT) protein EP550_09275 IPR019808 Histidine triad, conserved site EP550_09275 IPR036265 HIT-like superfamily EP550_09305 IPR013216 Methyltransferase type 11 EP550_09305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_09310 IPR029058 Alpha/Beta hydrolase fold EP550_09310 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit EP550_09310 IPR000073 Alpha/beta hydrolase fold-1 EP550_09315 IPR006234 O-succinylhomoserine sulfhydrylase EP550_09315 IPR015424 Pyridoxal phosphate-dependent transferase EP550_09315 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_09315 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_09315 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme EP550_09325 IPR004401 Nucleoid-associated protein YbaB/EbfC family EP550_09325 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily EP550_09330 IPR034137 RecR, TOPRIM domain EP550_09330 IPR006171 TOPRIM domain EP550_09330 IPR015967 Recombination protein RecR, conserved site EP550_09330 IPR023628 Recombination protein RecR, C4-type zinc finger EP550_09330 IPR023627 Recombination protein RecR EP550_09330 IPR000093 DNA recombination protein RecR EP550_09335 IPR012337 Ribonuclease H-like superfamily EP550_09335 IPR036397 Ribonuclease H superfamily EP550_09335 IPR006292 Ribonuclease D EP550_09335 IPR002562 3'-5' exonuclease domain EP550_09335 IPR002121 HRDC domain EP550_09335 IPR010997 HRDC-like superfamily EP550_09355 IPR038068 YcgL-like superfamily EP550_09355 IPR027354 YcgL domain EP550_09365 IPR000642 Peptidase M41 EP550_09365 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_09365 IPR003593 AAA+ ATPase domain EP550_09365 IPR005936 Peptidase, FtsH EP550_09365 IPR041569 AAA ATPase, AAA+ lid domain EP550_09365 IPR037219 Peptidase M41-like EP550_09365 IPR003959 ATPase, AAA-type, core EP550_09375 IPR023026 Tryptophan synthase beta chain/beta chain-like EP550_09375 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP550_09375 IPR006654 Tryptophan synthase, beta chain EP550_09375 IPR006653 Tryptophan synthase, beta chain, conserved site EP550_09375 IPR001926 Pyridoxal-phosphate dependent enzyme EP550_09380 IPR007848 Methyltransferase small domain EP550_09380 IPR002052 DNA methylase, N-6 adenine-specific, conserved site EP550_09380 IPR004556 Methyltransferase HemK-like EP550_09380 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase EP550_09380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_09385 IPR035904 Chorismate synthase AroC superfamily EP550_09385 IPR000453 Chorismate synthase EP550_09385 IPR020541 Chorismate synthase, conserved site EP550_09405 IPR003698 Lipoyl synthase EP550_09405 IPR007197 Radical SAM EP550_09405 IPR006638 Elp3/MiaB/NifB EP550_09405 IPR013785 Aldolase-type TIM barrel EP550_09410 IPR001017 Dehydrogenase, E1 component EP550_09410 IPR029061 Thiamin diphosphate-binding fold EP550_09415 IPR033248 Transketolase, C-terminal domain EP550_09415 IPR029061 Thiamin diphosphate-binding fold EP550_09415 IPR005475 Transketolase-like, pyrimidine-binding domain EP550_09415 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II EP550_09420 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site EP550_09420 IPR004167 Peripheral subunit-binding domain EP550_09420 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain EP550_09420 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex EP550_09420 IPR011053 Single hybrid motif EP550_09420 IPR036625 E3-binding domain superfamily EP550_09420 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily EP550_09420 IPR000089 Biotin/lipoyl attachment EP550_09425 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily EP550_09425 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I EP550_09425 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EP550_09425 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site EP550_09425 IPR023753 FAD/NAD(P)-binding domain EP550_09425 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_09425 IPR006258 Dihydrolipoamide dehydrogenase EP550_09430 IPR014007 Acetoin reductase EP550_09430 IPR036291 NAD(P)-binding domain superfamily EP550_09430 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_09430 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_09435 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site EP550_09435 IPR013154 Alcohol dehydrogenase, N-terminal EP550_09435 IPR013149 Alcohol dehydrogenase, C-terminal EP550_09435 IPR020843 Polyketide synthase, enoylreductase domain EP550_09435 IPR011032 GroES-like superfamily EP550_09435 IPR036291 NAD(P)-binding domain superfamily EP550_09440 IPR021134 Bestrophin/UPF0187 EP550_09445 IPR002197 DNA binding HTH domain, Fis-type EP550_09445 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 EP550_09445 IPR009057 Homeobox-like domain superfamily EP550_09445 IPR011006 CheY-like superfamily EP550_09445 IPR001789 Signal transduction response regulator, receiver domain EP550_09445 IPR010114 DNA-binding transcriptional regulator NtrC EP550_09445 IPR002078 RNA polymerase sigma factor 54 interaction domain EP550_09445 IPR025944 Sigma-54 interaction domain, conserved site EP550_09445 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_09445 IPR003593 AAA+ ATPase domain EP550_09450 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP550_09450 IPR001279 Metallo-beta-lactamase EP550_09450 IPR005939 Beta-lactamase hydrolase-like EP550_09450 IPR029021 Protein-tyrosine phosphatase-like EP550_09455 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP550_09455 IPR029021 Protein-tyrosine phosphatase-like EP550_09455 IPR001279 Metallo-beta-lactamase EP550_09455 IPR005939 Beta-lactamase hydrolase-like EP550_09460 IPR002781 Transmembrane protein TauE-like EP550_09475 IPR020449 Transcription regulator HTH, AraC- type EP550_09475 IPR011256 Regulatory factor, effector binding domain superfamily EP550_09475 IPR010499 Bacterial transcription activator, effector binding EP550_09475 IPR018062 HTH domain AraC-type, conserved site EP550_09475 IPR018060 DNA binding HTH domain, AraC-type EP550_09475 IPR009057 Homeobox-like domain superfamily EP550_09475 IPR029442 GyrI-like small molecule binding domain EP550_09480 IPR002577 Helix-turn-helix, HxlR type EP550_09480 IPR036390 Winged helix DNA-binding domain superfamily EP550_09480 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_09485 IPR003680 Flavodoxin-like fold EP550_09485 IPR023048 NADH-azoreductase, FMN-dependent EP550_09485 IPR029039 Flavoprotein-like superfamily EP550_09510 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP550_09510 IPR010068 Taurine ABC transporter, substrate-binding protein TauA EP550_09510 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain EP550_09515 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_09515 IPR035906 MetI-like superfamily EP550_09520 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_09520 IPR015859 ABC transporter, taurine import, TauD EP550_09520 IPR017871 ABC transporter, conserved site EP550_09520 IPR003439 ABC transporter-like EP550_09520 IPR003593 AAA+ ATPase domain EP550_09535 IPR020846 Major facilitator superfamily domain EP550_09535 IPR005828 Major facilitator, sugar transporter-like EP550_09535 IPR036259 MFS transporter superfamily EP550_09535 IPR004736 MFS transporter, metabolite:H symporter EP550_09535 IPR005829 Sugar transporter, conserved site EP550_09540 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP550_09540 IPR010917 TonB-dependent receptor, conserved site EP550_09540 IPR010105 TonB-dependent siderophore receptor EP550_09540 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_09540 IPR039423 TonB-dependent receptor-like EP550_09540 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_09540 IPR012910 TonB-dependent receptor, plug domain EP550_09540 IPR030149 TonB-dependent siderophore receptor FcuA/FatA EP550_09540 IPR010916 TonB box, conserved site EP550_09545 IPR008948 L-Aspartase-like EP550_09545 IPR024083 Fumarase/histidase, N-terminal EP550_09545 IPR004708 Aspartate ammonia-lyase EP550_09545 IPR018951 Fumarase C, C-terminal EP550_09545 IPR020557 Fumarate lyase, conserved site EP550_09545 IPR000362 Fumarate lyase family EP550_09545 IPR022761 Fumarate lyase, N-terminal EP550_09560 IPR036390 Winged helix DNA-binding domain superfamily EP550_09560 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_09560 IPR000847 Transcription regulator HTH, LysR EP550_09560 IPR005119 LysR, substrate-binding EP550_09565 IPR036390 Winged helix DNA-binding domain superfamily EP550_09565 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_09565 IPR005119 LysR, substrate-binding EP550_09565 IPR000847 Transcription regulator HTH, LysR EP550_09570 IPR020616 Thiolase, N-terminal EP550_09570 IPR020610 Thiolase, active site EP550_09570 IPR020615 Thiolase, acyl-enzyme intermediate active site EP550_09570 IPR016039 Thiolase-like EP550_09570 IPR002155 Thiolase EP550_09570 IPR020613 Thiolase, conserved site EP550_09570 IPR020617 Thiolase, C-terminal EP550_09575 IPR006160 Short chain fatty acid transporter AtoE EP550_09575 IPR006161 Conserved hypothetical protein CHP00336 EP550_09580 IPR004164 Coenzyme A transferase active site EP550_09580 IPR012791 3-oxoacid CoA-transferase, subunit B EP550_09580 IPR037171 NagB/RpiA transferase-like EP550_09580 IPR004165 Coenzyme A transferase family I EP550_09585 IPR012792 3-oxoacid CoA-transferase, subunit A EP550_09585 IPR004165 Coenzyme A transferase family I EP550_09585 IPR037171 NagB/RpiA transferase-like EP550_09585 IPR004163 Coenzyme A transferase binding site EP550_09590 IPR036390 Winged helix DNA-binding domain superfamily EP550_09590 IPR000847 Transcription regulator HTH, LysR EP550_09590 IPR005119 LysR, substrate-binding EP550_09590 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_09600 IPR003474 Gluconate transporter EP550_09605 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_09605 IPR036291 NAD(P)-binding domain superfamily EP550_09605 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_09605 IPR011294 3-hydroxybutyrate dehydrogenase EP550_09610 IPR009057 Homeobox-like domain superfamily EP550_09610 IPR018060 DNA binding HTH domain, AraC-type EP550_09610 IPR009594 Transcription regulator HTH, AraC, N-terminal EP550_09615 IPR020846 Major facilitator superfamily domain EP550_09615 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family EP550_09615 IPR005829 Sugar transporter, conserved site EP550_09615 IPR011701 Major facilitator superfamily EP550_09615 IPR036259 MFS transporter superfamily EP550_09620 IPR002925 Dienelactone hydrolase EP550_09620 IPR029058 Alpha/Beta hydrolase fold EP550_09625 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_09625 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_09625 IPR036291 NAD(P)-binding domain superfamily EP550_09635 IPR002563 Flavin reductase like domain EP550_09635 IPR012349 FMN-binding split barrel EP550_09635 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_09635 IPR036390 Winged helix DNA-binding domain superfamily EP550_09650 IPR036010 2Fe-2S ferredoxin-like superfamily EP550_09650 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP550_09650 IPR017927 FAD-binding domain, ferredoxin reductase-type EP550_09650 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain EP550_09650 IPR012675 Beta-grasp domain superfamily EP550_09650 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP550_09650 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site EP550_09650 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP550_09650 IPR017938 Riboflavin synthase-like beta-barrel EP550_09655 IPR032710 NTF2-like domain superfamily EP550_09655 IPR017640 Anthranilate 1,2-dioxygenase, small subunit EP550_09655 IPR000391 Ring-hydroxylating dioxygenase beta subunit EP550_09660 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP550_09660 IPR017638 Anthranilate 1,2-dioxygenase, large subunit EP550_09660 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site EP550_09660 IPR017941 Rieske [2Fe-2S] iron-sulphur domain EP550_09660 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit EP550_09660 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain EP550_09665 IPR003725 Molybdenum-binding protein ModE, N-terminal EP550_09665 IPR004606 Molybdenum-pterin binding EP550_09665 IPR005116 Transport-associated OB, type 1 EP550_09665 IPR000847 Transcription regulator HTH, LysR EP550_09665 IPR016462 Molybdate-dependent transcriptional regulator ModE EP550_09665 IPR036390 Winged helix DNA-binding domain superfamily EP550_09665 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_09665 IPR008995 Molybdate/tungstate binding, C-terminal EP550_09670 IPR005950 Molybdate ABC transporter, substrate-binding protein EP550_09675 IPR035906 MetI-like superfamily EP550_09675 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_09675 IPR011867 Molybdate ABC transporter, permease protein EP550_09680 IPR015852 ABC transporter, molybdenum import, ModC EP550_09680 IPR008995 Molybdate/tungstate binding, C-terminal EP550_09680 IPR017871 ABC transporter, conserved site EP550_09680 IPR005116 Transport-associated OB, type 1 EP550_09680 IPR003439 ABC transporter-like EP550_09680 IPR003593 AAA+ ATPase domain EP550_09680 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_09680 IPR004606 Molybdenum-pterin binding EP550_09680 IPR011868 Molybdate ABC transporter, ATP-binding protein EP550_09685 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase EP550_09685 IPR036291 NAD(P)-binding domain superfamily EP550_09685 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_09685 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_09690 IPR016291 Isochorismatase EP550_09690 IPR000868 Isochorismatase-like EP550_09690 IPR036380 Isochorismatase-like superfamily EP550_09690 IPR036736 ACP-like superfamily EP550_09690 IPR009081 Phosphopantetheine binding ACP domain EP550_09700 IPR006179 5'-Nucleotidase/apyrase EP550_09700 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type EP550_09700 IPR029052 Metallo-dependent phosphatase-like EP550_09705 IPR025198 Polyphosphate kinase N-terminal domain EP550_09705 IPR025200 Polyphosphate kinase C-terminal domain 2 EP550_09705 IPR036830 Polyphosphate kinase middle domain superfamily EP550_09705 IPR024953 Polyphosphate kinase middle domain EP550_09705 IPR041108 Polyphosphate kinase, C-terminal domain 1 EP550_09705 IPR003414 Polyphosphate kinase EP550_09705 IPR036832 Polyphosphate kinase N-terminal domain superfamily EP550_09710 IPR011725 Coenzyme PQQ biosynthesis protein A EP550_09715 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP550_09715 IPR011842 Coenzyme PQQ biosynthesis protein B EP550_09715 IPR001279 Metallo-beta-lactamase EP550_09720 IPR004305 Thiaminase-2/PQQC EP550_09720 IPR016084 Haem oxygenase-like, multi-helical EP550_09720 IPR039068 Pyrroloquinoline-quinone synthase-like EP550_09720 IPR011845 Coenzyme PQQ biosynthesis protein C EP550_09725 IPR041881 Coenzyme PQQ synthesis protein D superfamily EP550_09725 IPR008792 Coenzyme PQQ synthesis protein D EP550_09725 IPR022479 Coenzyme PQQ synthesis D, bacteria EP550_09730 IPR017200 Coenzyme PQQ synthesis protein E EP550_09730 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria EP550_09730 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site EP550_09730 IPR006638 Elp3/MiaB/NifB EP550_09730 IPR023885 4Fe4S-binding SPASM domain EP550_09730 IPR007197 Radical SAM EP550_09730 IPR013785 Aldolase-type TIM barrel EP550_09735 IPR000180 Membrane dipeptidase, active site EP550_09735 IPR008257 Peptidase M19 EP550_09735 IPR032466 Metal-dependent hydrolase EP550_09770 IPR030871 Cardiolipin synthase C EP550_09770 IPR025202 Phospholipase D-like domain EP550_09770 IPR001736 Phospholipase D/Transphosphatidylase EP550_09785 IPR020835 Catalase superfamily EP550_09785 IPR011614 Catalase core domain EP550_09795 IPR020843 Polyketide synthase, enoylreductase domain EP550_09795 IPR036291 NAD(P)-binding domain superfamily EP550_09795 IPR013149 Alcohol dehydrogenase, C-terminal EP550_09795 IPR014183 Alcohol dehydrogenase class III EP550_09795 IPR013154 Alcohol dehydrogenase, N-terminal EP550_09795 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site EP550_09795 IPR011032 GroES-like superfamily EP550_09805 IPR008966 Adhesion domain superfamily EP550_09805 IPR036937 Fimbrial-type adhesion domain superfamily EP550_09805 IPR000259 Fimbrial-type adhesion domain EP550_09810 IPR037224 PapC, N-terminal domain superfamily EP550_09810 IPR025885 PapC, N-terminal domain EP550_09810 IPR025949 PapC-like, C-terminal domain EP550_09810 IPR000015 Outer membrane usher protein EP550_09810 IPR018030 Fimbrial membrane usher, conserved site EP550_09810 IPR042186 Outer membrane usher protein FimD, plug domain EP550_09815 IPR008962 PapD-like superfamily EP550_09815 IPR036316 Pili assembly chaperone, C-terminal domain superfamily EP550_09815 IPR016148 Pili assembly chaperone, C-terminal EP550_09815 IPR001829 Pili assembly chaperone, bacterial EP550_09815 IPR016147 Pili assembly chaperone, N-terminal EP550_09815 IPR018046 Pili assembly chaperone, conserved site EP550_09815 IPR013783 Immunoglobulin-like fold EP550_09820 IPR008966 Adhesion domain superfamily EP550_09820 IPR039458 FimA-like EP550_09820 IPR036937 Fimbrial-type adhesion domain superfamily EP550_09840 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_09840 IPR006076 FAD dependent oxidoreductase EP550_09855 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_09855 IPR002937 Amine oxidase EP550_09855 IPR001613 Flavin amine oxidase EP550_09860 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_09860 IPR020946 Flavin monooxygenase-like EP550_09865 IPR029058 Alpha/Beta hydrolase fold EP550_09865 IPR022742 Serine aminopeptidase, S33 EP550_09870 IPR003423 Outer membrane efflux protein EP550_09870 IPR010131 RND efflux system, outer membrane lipoprotein, NodT EP550_09875 IPR001036 Acriflavin resistance protein EP550_09875 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 EP550_09875 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains EP550_09880 IPR006143 RND efflux pump, membrane fusion protein EP550_09880 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain EP550_09885 IPR001789 Signal transduction response regulator, receiver domain EP550_09885 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_09885 IPR039420 Transcriptional regulatory protein WalR-like EP550_09885 IPR011006 CheY-like superfamily EP550_09885 IPR001867 OmpR/PhoB-type DNA-binding domain EP550_09890 IPR003594 Histidine kinase/HSP90-like ATPase EP550_09890 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_09890 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP550_09890 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP550_09890 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP550_09890 IPR005467 Histidine kinase domain EP550_09890 IPR003660 HAMP domain EP550_09890 IPR038515 CpxA, periplasmic domain superfamily EP550_09890 IPR032404 Two-component sensor protein CpxA, periplasmic domain EP550_09895 IPR038404 TRAP transporter solute receptor DctP superfamily EP550_09900 IPR020449 Transcription regulator HTH, AraC- type EP550_09900 IPR003313 AraC-type arabinose-binding/dimerisation domain EP550_09900 IPR009057 Homeobox-like domain superfamily EP550_09900 IPR037923 Transcription regulator HTH-like EP550_09900 IPR018060 DNA binding HTH domain, AraC-type EP550_09900 IPR018062 HTH domain AraC-type, conserved site EP550_09905 IPR029058 Alpha/Beta hydrolase fold EP550_09905 IPR022742 Serine aminopeptidase, S33 EP550_09910 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_09910 IPR036291 NAD(P)-binding domain superfamily EP550_09915 IPR036291 NAD(P)-binding domain superfamily EP550_09915 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_09915 IPR023985 Mycofactocin-dependent oxidoreductase EP550_09915 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_09960 IPR012675 Beta-grasp domain superfamily EP550_09960 IPR003607 HD/PDEase domain EP550_09960 IPR004811 RelA/SpoT family EP550_09960 IPR007685 RelA/SpoT EP550_09960 IPR004095 TGS EP550_09960 IPR012676 TGS-like EP550_09960 IPR033655 RelA, TGS domain EP550_09960 IPR002912 ACT domain EP550_09970 IPR002828 Survival protein SurE-like phosphatase/nucleotidase EP550_09970 IPR036523 SurE-like phosphatase/nucleotidase superfamily EP550_09970 IPR030048 Survival protein SurE EP550_09995 IPR011701 Major facilitator superfamily EP550_09995 IPR036259 MFS transporter superfamily EP550_09995 IPR020846 Major facilitator superfamily domain EP550_09995 IPR004638 Drug resistance transporter EmrB-like EP550_10000 IPR039562 Membrane fusion protein, biotin-lipoyl like domain EP550_10005 IPR036928 Amidase signature (AS) superfamily EP550_10005 IPR023631 Amidase signature domain EP550_10005 IPR020556 Amidase, conserved site EP550_10005 IPR000120 Amidase EP550_10010 IPR000792 Transcription regulator LuxR, C-terminal EP550_10010 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_10010 IPR016032 Signal transduction response regulator, C-terminal effector EP550_10085 IPR013785 Aldolase-type TIM barrel EP550_10085 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase EP550_10085 IPR016471 Nicotinamide phosphoribosyl transferase EP550_10085 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal EP550_10090 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain EP550_10090 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site EP550_10090 IPR029057 Phosphoribosyltransferase-like EP550_10090 IPR005946 Ribose-phosphate pyrophosphokinase EP550_10090 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type EP550_10090 IPR000836 Phosphoribosyltransferase domain EP550_10110 IPR003439 ABC transporter-like EP550_10110 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_10110 IPR017871 ABC transporter, conserved site EP550_10110 IPR003593 AAA+ ATPase domain EP550_10125 IPR013154 Alcohol dehydrogenase, N-terminal EP550_10125 IPR020843 Polyketide synthase, enoylreductase domain EP550_10125 IPR036291 NAD(P)-binding domain superfamily EP550_10125 IPR011032 GroES-like superfamily EP550_10125 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site EP550_10125 IPR013149 Alcohol dehydrogenase, C-terminal EP550_10140 IPR009057 Homeobox-like domain superfamily EP550_10140 IPR018060 DNA binding HTH domain, AraC-type EP550_10140 IPR009594 Transcription regulator HTH, AraC, N-terminal EP550_10145 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP550_10145 IPR013328 6-phosphogluconate dehydrogenase, domain 2 EP550_10145 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding EP550_10145 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site EP550_10145 IPR036291 NAD(P)-binding domain superfamily EP550_10145 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain EP550_10145 IPR006398 2-hydroxy-3-oxopropionate reductase EP550_10145 IPR015815 3-hydroxyisobutyrate dehydrogenase-related EP550_10150 IPR020846 Major facilitator superfamily domain EP550_10150 IPR011701 Major facilitator superfamily EP550_10150 IPR036259 MFS transporter superfamily EP550_10155 IPR001509 NAD-dependent epimerase/dehydratase EP550_10155 IPR036291 NAD(P)-binding domain superfamily EP550_10160 IPR005119 LysR, substrate-binding EP550_10160 IPR000847 Transcription regulator HTH, LysR EP550_10160 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_10160 IPR036390 Winged helix DNA-binding domain superfamily EP550_10170 IPR042096 Dihydroxy-acid dehydratase, C-terminal EP550_10170 IPR037237 IlvD/EDD, N-terminal domain EP550_10170 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase EP550_10170 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site EP550_10175 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_10175 IPR016161 Aldehyde/histidinol dehydrogenase EP550_10175 IPR015590 Aldehyde dehydrogenase domain EP550_10175 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_10190 IPR005694 Efflux pump membrane protein EP550_10190 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain EP550_10210 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein EP550_10210 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily EP550_10215 IPR036291 NAD(P)-binding domain superfamily EP550_10215 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site EP550_10215 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain EP550_10215 IPR006236 D-3-phosphoglycerate dehydrogenase EP550_10215 IPR002912 ACT domain EP550_10215 IPR029009 Allosteric substrate binding domain superfamily EP550_10215 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 EP550_10215 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EP550_10220 IPR020846 Major facilitator superfamily domain EP550_10220 IPR036259 MFS transporter superfamily EP550_10220 IPR011701 Major facilitator superfamily EP550_10240 IPR005119 LysR, substrate-binding EP550_10240 IPR000847 Transcription regulator HTH, LysR EP550_10240 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_10240 IPR036390 Winged helix DNA-binding domain superfamily EP550_10250 IPR005511 Senescence marker protein-30 (SMP-30) EP550_10250 IPR013658 SMP-30/Gluconolactonase/LRE-like region EP550_10250 IPR011042 Six-bladed beta-propeller, TolB-like EP550_10265 IPR032466 Metal-dependent hydrolase EP550_10265 IPR006680 Amidohydrolase-related EP550_10270 IPR036259 MFS transporter superfamily EP550_10270 IPR020846 Major facilitator superfamily domain EP550_10270 IPR011701 Major facilitator superfamily EP550_10285 IPR008638 Filamentous haemagglutinin, N-terminal EP550_10285 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat EP550_10285 IPR025157 Hemagglutinin repeat EP550_10285 IPR024973 ESPR domain EP550_10285 IPR011050 Pectin lyase fold/virulence factor EP550_10285 IPR006914 VENN motif-containing domain EP550_10285 IPR012334 Pectin lyase fold EP550_10290 IPR027282 Two partner secretion pathway transporter EP550_10290 IPR034746 POTRA domain EP550_10290 IPR035251 ShlB, POTRA domain EP550_10290 IPR013686 Polypeptide-transport-associated, ShlB-type EP550_10290 IPR005565 Haemolysin activator HlyB, C-terminal EP550_10305 IPR002933 Peptidase M20 EP550_10305 IPR011650 Peptidase M20, dimerisation domain EP550_10305 IPR017439 Amidohydrolase EP550_10305 IPR036264 Bacterial exopeptidase dimerisation domain EP550_10315 IPR006153 Cation/H+ exchanger EP550_10315 IPR004771 K+/H+ exchanger EP550_10315 IPR038770 Sodium/solute symporter superfamily EP550_10315 IPR003148 Regulator of K+ conductance, N-terminal EP550_10315 IPR036291 NAD(P)-binding domain superfamily EP550_10320 IPR019893 PQQ-dependent dehydrogenase, s-GDH family EP550_10320 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase EP550_10320 IPR012938 Glucose/Sorbosone dehydrogenase EP550_10320 IPR011042 Six-bladed beta-propeller, TolB-like EP550_10325 IPR036390 Winged helix DNA-binding domain superfamily EP550_10325 IPR005119 LysR, substrate-binding EP550_10325 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_10325 IPR000847 Transcription regulator HTH, LysR EP550_10330 IPR000868 Isochorismatase-like EP550_10330 IPR036380 Isochorismatase-like superfamily EP550_10340 IPR025668 Transposase DDE domain EP550_10350 IPR009057 Homeobox-like domain superfamily EP550_10350 IPR013570 Transcription regulator YsiA, C-terminal EP550_10350 IPR001647 DNA-binding HTH domain, TetR-type EP550_10350 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP550_10355 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D EP550_10355 IPR001279 Metallo-beta-lactamase EP550_10355 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP550_10365 IPR023753 FAD/NAD(P)-binding domain EP550_10365 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_10375 IPR009061 Putative DNA-binding domain superfamily EP550_10375 IPR000551 MerR-type HTH domain EP550_10375 IPR015358 Transcription regulator MerR, DNA binding EP550_10375 IPR011789 Cu(I)-responsive transcriptional regulator EP550_10380 IPR024072 Dihydrofolate reductase-like domain superfamily EP550_10380 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal EP550_10385 IPR036291 NAD(P)-binding domain superfamily EP550_10385 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_10390 IPR013785 Aldolase-type TIM barrel EP550_10390 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_10390 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal EP550_10390 IPR023753 FAD/NAD(P)-binding domain EP550_10395 IPR036390 Winged helix DNA-binding domain superfamily EP550_10395 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_10395 IPR000835 MarR-type HTH domain EP550_10400 IPR029058 Alpha/Beta hydrolase fold EP550_10400 IPR013094 Alpha/beta hydrolase fold-3 EP550_10420 IPR011614 Catalase core domain EP550_10420 IPR020835 Catalase superfamily EP550_10420 IPR018028 Catalase, mono-functional, haem-containing EP550_10420 IPR010582 Catalase immune-responsive domain EP550_10420 IPR002226 Catalase haem-binding site EP550_10420 IPR040333 Catalase, clade 3 EP550_10420 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 EP550_10420 IPR024708 Catalase active site EP550_10420 IPR037060 Catalase core domain superfamily EP550_10425 IPR029058 Alpha/Beta hydrolase fold EP550_10425 IPR000639 Epoxide hydrolase-like EP550_10425 IPR000073 Alpha/beta hydrolase fold-1 EP550_10435 IPR016161 Aldehyde/histidinol dehydrogenase EP550_10435 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent EP550_10435 IPR015590 Aldehyde dehydrogenase domain EP550_10435 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_10435 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP550_10435 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_10440 IPR020843 Polyketide synthase, enoylreductase domain EP550_10440 IPR013154 Alcohol dehydrogenase, N-terminal EP550_10440 IPR011032 GroES-like superfamily EP550_10440 IPR013149 Alcohol dehydrogenase, C-terminal EP550_10440 IPR036291 NAD(P)-binding domain superfamily EP550_10445 IPR001734 Sodium/solute symporter EP550_10445 IPR014083 Cation/acetate symporter ActP EP550_10445 IPR018212 Sodium/solute symporter, conserved site EP550_10445 IPR038377 Sodium/glucose symporter superfamily EP550_10450 IPR007436 Protein of unknown function DUF485 EP550_10455 IPR000873 AMP-dependent synthetase/ligase EP550_10455 IPR025110 AMP-binding enzyme, C-terminal domain EP550_10455 IPR042099 AMP-dependent synthetase-like superfamily EP550_10455 IPR020845 AMP-binding, conserved site EP550_10460 IPR025944 Sigma-54 interaction domain, conserved site EP550_10460 IPR003593 AAA+ ATPase domain EP550_10460 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR EP550_10460 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 EP550_10460 IPR009057 Homeobox-like domain superfamily EP550_10460 IPR002197 DNA binding HTH domain, Fis-type EP550_10460 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_10460 IPR002078 RNA polymerase sigma factor 54 interaction domain EP550_10460 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal EP550_10465 IPR036291 NAD(P)-binding domain superfamily EP550_10465 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase EP550_10465 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_10465 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_10470 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_10470 IPR006089 Acyl-CoA dehydrogenase, conserved site EP550_10470 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_10470 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_10470 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_10470 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_10470 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_10490 IPR016161 Aldehyde/histidinol dehydrogenase EP550_10490 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_10490 IPR015590 Aldehyde dehydrogenase domain EP550_10490 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_10500 IPR020846 Major facilitator superfamily domain EP550_10500 IPR011701 Major facilitator superfamily EP550_10500 IPR036259 MFS transporter superfamily EP550_10505 IPR042096 Dihydroxy-acid dehydratase, C-terminal EP550_10505 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase EP550_10505 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site EP550_10505 IPR037237 IlvD/EDD, N-terminal domain EP550_10510 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_10510 IPR000524 Transcription regulator HTH, GntR EP550_10510 IPR008920 Transcription regulator FadR/GntR, C-terminal EP550_10510 IPR011711 GntR, C-terminal EP550_10510 IPR036390 Winged helix DNA-binding domain superfamily EP550_10520 IPR036390 Winged helix DNA-binding domain superfamily EP550_10520 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_10520 IPR005119 LysR, substrate-binding EP550_10520 IPR000847 Transcription regulator HTH, LysR EP550_10525 IPR036849 Enolase-like, C-terminal domain superfamily EP550_10525 IPR029017 Enolase-like, N-terminal EP550_10525 IPR013370 Muconate/chloromuconate cycloisomerase EP550_10525 IPR029065 Enolase C-terminal domain-like EP550_10525 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal EP550_10525 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain EP550_10525 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site EP550_10530 IPR003464 Muconolactone delta-isomerase EP550_10530 IPR026029 Muconolactone isomerase domain EP550_10530 IPR011008 Dimeric alpha-beta barrel EP550_10535 IPR012801 Catechol 1,2-dioxygenase, proteobacteria EP550_10535 IPR015889 Intradiol ring-cleavage dioxygenase, core EP550_10535 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal EP550_10535 IPR007535 Catechol dioxygenase, N-terminal EP550_10540 IPR012792 3-oxoacid CoA-transferase, subunit A EP550_10540 IPR004165 Coenzyme A transferase family I EP550_10540 IPR004163 Coenzyme A transferase binding site EP550_10540 IPR037171 NagB/RpiA transferase-like EP550_10545 IPR004165 Coenzyme A transferase family I EP550_10545 IPR004164 Coenzyme A transferase active site EP550_10545 IPR012791 3-oxoacid CoA-transferase, subunit B EP550_10545 IPR037171 NagB/RpiA transferase-like EP550_10550 IPR012793 Beta-ketoadipyl CoA thiolase EP550_10550 IPR002155 Thiolase EP550_10550 IPR016039 Thiolase-like EP550_10550 IPR020617 Thiolase, C-terminal EP550_10550 IPR020613 Thiolase, conserved site EP550_10550 IPR020615 Thiolase, acyl-enzyme intermediate active site EP550_10550 IPR020616 Thiolase, N-terminal EP550_10550 IPR020610 Thiolase, active site EP550_10555 IPR022742 Serine aminopeptidase, S33 EP550_10555 IPR029058 Alpha/Beta hydrolase fold EP550_10555 IPR026968 3-oxoadipate enol-lactonase 1/2 EP550_10555 IPR000073 Alpha/beta hydrolase fold-1 EP550_10560 IPR029055 Nucleophile aminohydrolases, N-terminal EP550_10560 IPR014395 Penicillin/GL-7-ACA/AHL acylase EP550_10560 IPR023343 Penicillin amidase type, domain 1 EP550_10560 IPR033813 Penicillin G acylase, C-terminal EP550_10560 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase EP550_10565 IPR015590 Aldehyde dehydrogenase domain EP550_10565 IPR016161 Aldehyde/histidinol dehydrogenase EP550_10565 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP550_10565 IPR016160 Aldehyde dehydrogenase, cysteine active site EP550_10565 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_10565 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_10575 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily EP550_10575 IPR015802 Copper amine oxidase, N3-terminal EP550_10575 IPR036460 Copper amine oxidase, catalytic domain superfamily EP550_10575 IPR015800 Copper amine oxidase, N2-terminal EP550_10575 IPR012854 Copper amine oxidase-like, N-terminal EP550_10575 IPR000269 Copper amine oxidase EP550_10575 IPR015798 Copper amine oxidase, catalytic domain EP550_10575 IPR016182 Copper amine oxidase, N-terminal EP550_10580 IPR009057 Homeobox-like domain superfamily EP550_10580 IPR037923 Transcription regulator HTH-like EP550_10580 IPR018060 DNA binding HTH domain, AraC-type EP550_10580 IPR003313 AraC-type arabinose-binding/dimerisation domain EP550_10580 IPR014710 RmlC-like jelly roll fold EP550_10580 IPR020449 Transcription regulator HTH, AraC- type EP550_10580 IPR023609 Transcription regulator HTH, RhaS EP550_10585 IPR036390 Winged helix DNA-binding domain superfamily EP550_10585 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_10585 IPR012349 FMN-binding split barrel EP550_10585 IPR002563 Flavin reductase like domain EP550_10590 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP550_10590 IPR036010 2Fe-2S ferredoxin-like superfamily EP550_10590 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site EP550_10590 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP550_10590 IPR012675 Beta-grasp domain superfamily EP550_10590 IPR017927 FAD-binding domain, ferredoxin reductase-type EP550_10590 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP550_10590 IPR017938 Riboflavin synthase-like beta-barrel EP550_10590 IPR000951 Phthalate dioxygenase reductase EP550_10595 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase EP550_10595 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_10595 IPR036291 NAD(P)-binding domain superfamily EP550_10595 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_10605 IPR017941 Rieske [2Fe-2S] iron-sulphur domain EP550_10605 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site EP550_10605 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP550_10605 IPR017639 Benzoate 1,2-dioxygenase, large subunit EP550_10605 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit EP550_10605 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain EP550_10620 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain EP550_10620 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_10620 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_10620 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_10625 IPR000120 Amidase EP550_10625 IPR020556 Amidase, conserved site EP550_10625 IPR023631 Amidase signature domain EP550_10625 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit EP550_10625 IPR036928 Amidase signature (AS) superfamily EP550_10635 IPR036259 MFS transporter superfamily EP550_10635 IPR011701 Major facilitator superfamily EP550_10635 IPR020846 Major facilitator superfamily domain EP550_10645 IPR036291 NAD(P)-binding domain superfamily EP550_10645 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_10645 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_10660 IPR006089 Acyl-CoA dehydrogenase, conserved site EP550_10660 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_10660 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_10660 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_10660 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_10660 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_10660 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_10665 IPR036390 Winged helix DNA-binding domain superfamily EP550_10665 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_10665 IPR000847 Transcription regulator HTH, LysR EP550_10665 IPR037416 Nodulation protein D, PBP2 EP550_10665 IPR005119 LysR, substrate-binding EP550_10670 IPR029016 GAF-like domain superfamily EP550_10670 IPR036390 Winged helix DNA-binding domain superfamily EP550_10670 IPR014757 Transcription regulator IclR, C-terminal EP550_10670 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_10670 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR EP550_10670 IPR005471 Transcription regulator IclR, N-terminal EP550_10675 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP550_10675 IPR001279 Metallo-beta-lactamase EP550_10685 IPR007272 Sulphur transport domain EP550_10695 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat EP550_10695 IPR017511 PQQ-dependent membrane bound dehydrogenase EP550_10695 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily EP550_10695 IPR001479 Quinoprotein dehydrogenase, conserved site EP550_10695 IPR002372 Pyrrolo-quinoline quinone repeat EP550_10700 IPR007049 Carbohydrate-selective porin OprB EP550_10700 IPR038673 Carbohydrate-selective porin OprB superfamily EP550_10705 IPR011050 Pectin lyase fold/virulence factor EP550_10705 IPR012334 Pectin lyase fold EP550_10705 IPR006626 Parallel beta-helix repeat EP550_10705 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain EP550_10710 IPR018508 3-dehydroquinate dehydratase, active site EP550_10710 IPR013785 Aldolase-type TIM barrel EP550_10710 IPR001381 3-dehydroquinate dehydratase type I EP550_10715 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit EP550_10715 IPR015889 Intradiol ring-cleavage dioxygenase, core EP550_10715 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal EP550_10720 IPR015889 Intradiol ring-cleavage dioxygenase, core EP550_10720 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal EP550_10720 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal EP550_10720 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit EP550_10725 IPR012788 4-carboxymuconolactone decarboxylase EP550_10725 IPR029032 AhpD-like EP550_10725 IPR003779 Carboxymuconolactone decarboxylase-like EP550_10730 IPR020846 Major facilitator superfamily domain EP550_10730 IPR036259 MFS transporter superfamily EP550_10730 IPR011701 Major facilitator superfamily EP550_10730 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family EP550_10730 IPR005829 Sugar transporter, conserved site EP550_10735 IPR026968 3-oxoadipate enol-lactonase 1/2 EP550_10735 IPR029058 Alpha/Beta hydrolase fold EP550_10735 IPR000073 Alpha/beta hydrolase fold-1 EP550_10740 IPR008948 L-Aspartase-like EP550_10740 IPR000362 Fumarate lyase family EP550_10740 IPR022761 Fumarate lyase, N-terminal EP550_10740 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase EP550_10740 IPR024083 Fumarase/histidase, N-terminal EP550_10740 IPR020557 Fumarate lyase, conserved site EP550_10740 IPR019468 Adenylosuccinate lyase C-terminal EP550_10745 IPR002155 Thiolase EP550_10745 IPR012793 Beta-ketoadipyl CoA thiolase EP550_10745 IPR020615 Thiolase, acyl-enzyme intermediate active site EP550_10745 IPR016039 Thiolase-like EP550_10745 IPR020610 Thiolase, active site EP550_10745 IPR020616 Thiolase, N-terminal EP550_10745 IPR020613 Thiolase, conserved site EP550_10745 IPR020617 Thiolase, C-terminal EP550_10750 IPR004165 Coenzyme A transferase family I EP550_10750 IPR012791 3-oxoacid CoA-transferase, subunit B EP550_10750 IPR004164 Coenzyme A transferase active site EP550_10750 IPR037171 NagB/RpiA transferase-like EP550_10755 IPR012792 3-oxoacid CoA-transferase, subunit A EP550_10755 IPR037171 NagB/RpiA transferase-like EP550_10755 IPR004163 Coenzyme A transferase binding site EP550_10755 IPR004165 Coenzyme A transferase family I EP550_10760 IPR034683 Cytidylyltransferase IspD/TarI EP550_10760 IPR029044 Nucleotide-diphospho-sugar transferases EP550_10760 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EP550_10760 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site EP550_10765 IPR007060 Septum formation initiator FtsL/DivIC EP550_10765 IPR023081 Cell division protein FtsB EP550_10770 IPR023090 UPF0702, alpha/beta domain superfamily EP550_10770 IPR007353 Protein of unknown function DUF421 EP550_10775 IPR036849 Enolase-like, C-terminal domain superfamily EP550_10775 IPR000941 Enolase EP550_10775 IPR020809 Enolase, conserved site EP550_10775 IPR029017 Enolase-like, N-terminal EP550_10775 IPR020810 Enolase, C-terminal TIM barrel domain EP550_10775 IPR020811 Enolase, N-terminal EP550_10780 IPR006269 3-deoxy-8-phosphooctulonate synthase EP550_10780 IPR013785 Aldolase-type TIM barrel EP550_10780 IPR006218 DAHP synthetase I/KDSA EP550_10785 IPR033828 CTP synthase GATase domain EP550_10785 IPR029062 Class I glutamine amidotransferase-like EP550_10785 IPR004468 CTP synthase EP550_10785 IPR017456 CTP synthase, N-terminal EP550_10785 IPR017926 Glutamine amidotransferase EP550_10785 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_10815 IPR023753 FAD/NAD(P)-binding domain EP550_10815 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal EP550_10815 IPR013785 Aldolase-type TIM barrel EP550_10815 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_10830 IPR006219 DHAP synthase, class 1 EP550_10830 IPR006218 DAHP synthetase I/KDSA EP550_10830 IPR013785 Aldolase-type TIM barrel EP550_10835 IPR003844 Uncharacterised protein family UPF0060 EP550_10840 IPR004176 Clp, N-terminal EP550_10840 IPR019489 Clp ATPase, C-terminal EP550_10840 IPR036628 Clp, N-terminal domain superfamily EP550_10840 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA EP550_10840 IPR001270 ClpA/B family EP550_10840 IPR018368 ClpA/B, conserved site 1 EP550_10840 IPR003593 AAA+ ATPase domain EP550_10840 IPR028299 ClpA/B, conserved site 2 EP550_10840 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_10840 IPR041546 ClpA/ClpB, AAA lid domain EP550_10840 IPR003959 ATPase, AAA-type, core EP550_10845 IPR022935 ATP-dependent Clp protease adaptor protein ClpS EP550_10845 IPR003769 Adaptor protein ClpS, core EP550_10845 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like EP550_10855 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site EP550_10855 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 EP550_10855 IPR036291 NAD(P)-binding domain superfamily EP550_10855 IPR012280 Semialdehyde dehydrogenase, dimerisation domain EP550_10855 IPR000534 Semialdehyde dehydrogenase, NAD-binding EP550_10870 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup EP550_10870 IPR037171 NagB/RpiA transferase-like EP550_10870 IPR004788 Ribose 5-phosphate isomerase, type A EP550_10875 IPR001721 Threonine dehydratase, ACT-like domain EP550_10875 IPR038110 Threonine dehydratase, ACT-like domain superfamily EP550_10875 IPR005787 Threonine dehydratase, biosynthetic EP550_10875 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site EP550_10875 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP550_10875 IPR001926 Pyridoxal-phosphate dependent enzyme EP550_10880 IPR036291 NAD(P)-binding domain superfamily EP550_10880 IPR006037 Regulator of K+ conductance, C-terminal EP550_10880 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily EP550_10880 IPR003148 Regulator of K+ conductance, N-terminal EP550_10885 IPR003445 Cation transporter EP550_10885 IPR004772 TrkH potassium transport family EP550_10890 IPR003187 Phospholipase A1 EP550_10890 IPR036541 Phospholipase A1 superfamily EP550_10895 IPR013578 Peptidase M16C associated EP550_10895 IPR011765 Peptidase M16, N-terminal EP550_10895 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like EP550_10895 IPR007863 Peptidase M16, C-terminal EP550_10900 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_10900 IPR012910 TonB-dependent receptor, plug domain EP550_10900 IPR010105 TonB-dependent siderophore receptor EP550_10900 IPR039423 TonB-dependent receptor-like EP550_10900 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_10900 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP550_10900 IPR010917 TonB-dependent receptor, conserved site EP550_10905 IPR029056 Ribokinase-like EP550_10905 IPR011611 Carbohydrate kinase PfkB EP550_10905 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site EP550_10915 IPR010840 Protein of unknown function DUF1449 EP550_10920 IPR036397 Ribonuclease H superfamily EP550_10920 IPR012337 Ribonuclease H-like superfamily EP550_10920 IPR001598 Transposase, IS30, conserved site EP550_10920 IPR025246 Transposase IS30-like HTH domain EP550_10920 IPR001584 Integrase, catalytic core EP550_10925 IPR025668 Transposase DDE domain EP550_10935 IPR002585 Cytochrome ubiquinol oxidase subunit 1 EP550_10940 IPR003317 Cytochrome ubiquinol oxidase subunit 2 EP550_10945 IPR012994 Membrane bound YbgT-like EP550_10945 IPR011724 Cyd operon protein YbgT EP550_10960 IPR018635 Uncharacterised protein family UPF0319 EP550_10970 IPR003593 AAA+ ATPase domain EP550_10970 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_10970 IPR004390 Signal-recognition particle receptor FtsY EP550_10970 IPR036225 SRP/SRP receptor, N-terminal EP550_10970 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily EP550_10970 IPR013822 Signal recognition particle SRP54, helical bundle EP550_10970 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain EP550_10995 IPR000644 CBS domain EP550_10995 IPR013785 Aldolase-type TIM barrel EP550_10995 IPR001093 IMP dehydrogenase/GMP reductase EP550_10995 IPR015875 IMP dehydrogenase / GMP reductase, conserved site EP550_10995 IPR005990 Inosine-5'-monophosphate dehydrogenase EP550_11000 IPR004636 Acetylornithine/Succinylornithine transaminase family EP550_11000 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_11000 IPR015424 Pyridoxal phosphate-dependent transferase EP550_11000 IPR005814 Aminotransferase class-III EP550_11000 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_11005 IPR014434 Monothiol glutaredoxin EP550_11005 IPR002109 Glutaredoxin EP550_11005 IPR033658 Glutaredoxin, PICOT-like EP550_11005 IPR004480 Monothiol glutaredoxin-related EP550_11005 IPR036249 Thioredoxin-like superfamily EP550_11015 IPR036390 Winged helix DNA-binding domain superfamily EP550_11015 IPR000847 Transcription regulator HTH, LysR EP550_11015 IPR005119 LysR, substrate-binding EP550_11015 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_11020 IPR001714 Peptidase M24, methionine aminopeptidase EP550_11020 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 EP550_11020 IPR036005 Creatinase/aminopeptidase-like EP550_11020 IPR000994 Peptidase M24 EP550_11025 IPR004685 Branched-chain amino acid transport system II carrier protein EP550_11050 IPR002114 Phosphotransferase system, HPr serine phosphorylation site EP550_11050 IPR016152 Phosphotransferase/anion transporter EP550_11050 IPR040442 Pyruvate kinase-like domain superfamily EP550_11050 IPR036618 PtsI, HPr-binding domain superfamily EP550_11050 IPR036637 Phosphohistidine domain superfamily EP550_11050 IPR000121 PEP-utilising enzyme, C-terminal EP550_11050 IPR000032 Phosphocarrier protein HPr-like EP550_11050 IPR035895 HPr-like superfamily EP550_11050 IPR006318 Phosphotransferase system, enzyme I-like EP550_11050 IPR008279 PEP-utilising enzyme, mobile domain EP550_11050 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site EP550_11050 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily EP550_11050 IPR002178 PTS EIIA type-2 domain EP550_11050 IPR008731 Phosphotransferase system, enzyme I N-terminal EP550_11050 IPR023151 PEP-utilising enzyme, conserved site EP550_11050 IPR018274 PEP-utilising enzyme, active site EP550_11055 IPR011611 Carbohydrate kinase PfkB EP550_11055 IPR029056 Ribokinase-like EP550_11055 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site EP550_11055 IPR017583 Tagatose/fructose phosphokinase EP550_11055 IPR022463 Fructose 1-phosphate kinase EP550_11060 IPR003353 Phosphotransferase system, fructose-specific IIB subunit EP550_11060 IPR006327 Phosphotransferase system, fructose IIC component EP550_11060 IPR036095 PTS system IIB component-like superfamily EP550_11060 IPR013011 Phosphotransferase system, EIIB component, type 2 EP550_11060 IPR003352 Phosphotransferase system, EIIC EP550_11060 IPR003501 Phosphotransferase system, EIIB component, type 2/3 EP550_11060 IPR013014 Phosphotransferase system, EIIC component, type 2 EP550_11080 IPR001633 EAL domain EP550_11080 IPR035919 EAL domain superfamily EP550_11080 IPR000160 GGDEF domain EP550_11080 IPR005330 MHYT domain EP550_11080 IPR035965 PAS domain superfamily EP550_11080 IPR029787 Nucleotide cyclase EP550_11090 IPR012938 Glucose/Sorbosone dehydrogenase EP550_11090 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase EP550_11090 IPR011042 Six-bladed beta-propeller, TolB-like EP550_11090 IPR019893 PQQ-dependent dehydrogenase, s-GDH family EP550_11095 IPR036590 SOS response associated peptidase-like EP550_11095 IPR003738 SOS response associated peptidase (SRAP) EP550_11100 IPR001902 SLC26A/SulP transporter EP550_11100 IPR002645 STAS domain EP550_11100 IPR036513 STAS domain superfamily EP550_11100 IPR011547 SLC26A/SulP transporter domain EP550_11100 IPR018045 Sulphate anion transporter, conserved site EP550_11105 IPR036852 Peptidase S8/S53 domain superfamily EP550_11105 IPR023827 Peptidase S8, subtilisin, Asp-active site EP550_11105 IPR022398 Peptidase S8, subtilisin, His-active site EP550_11105 IPR023828 Peptidase S8, subtilisin, Ser-active site EP550_11105 IPR015500 Peptidase S8, subtilisin-related EP550_11105 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 EP550_11105 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily EP550_11105 IPR000209 Peptidase S8/S53 domain EP550_11105 IPR034193 Proteinase K-like catalytic domain EP550_11115 IPR004841 Amino acid permease/ SLC12A domain EP550_11115 IPR004840 Amino acid permease, conserved site EP550_11120 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_11120 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_11120 IPR000192 Aminotransferase class V domain EP550_11120 IPR015424 Pyridoxal phosphate-dependent transferase EP550_11120 IPR010111 Kynureninase EP550_11125 IPR011008 Dimeric alpha-beta barrel EP550_11125 IPR000485 AsnC-type HTH domain EP550_11125 IPR011991 ArsR-like helix-turn-helix domain EP550_11125 IPR019888 Transcription regulator AsnC-type EP550_11125 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_11125 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP550_11125 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP550_11125 IPR036390 Winged helix DNA-binding domain superfamily EP550_11150 IPR023214 HAD superfamily EP550_11150 IPR041492 Haloacid dehalogenase-like hydrolase EP550_11150 IPR036412 HAD-like superfamily EP550_11150 IPR006439 HAD hydrolase, subfamily IA EP550_11155 IPR025708 Heat shock protein 15 EP550_11155 IPR036986 RNA-binding S4 domain superfamily EP550_11155 IPR002942 RNA-binding S4 domain EP550_11160 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_11160 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain EP550_11160 IPR023400 DNA recombination and repair protein RecA, C-terminal EP550_11160 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface EP550_11160 IPR013765 DNA recombination and repair protein RecA EP550_11160 IPR003593 AAA+ ATPase domain EP550_11160 IPR020584 DNA recombination/repair protein RecA, conserved site EP550_11165 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_11165 IPR003783 Regulatory protein RecX EP550_11180 IPR011004 Trimeric LpxA-like superfamily EP550_11180 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily EP550_11180 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal EP550_11180 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase EP550_11180 IPR018357 Hexapeptide transferase, conserved site EP550_11180 IPR001451 Hexapeptide repeat EP550_11185 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ EP550_11185 IPR029069 HotDog domain superfamily EP550_11185 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ EP550_11190 IPR011004 Trimeric LpxA-like superfamily EP550_11190 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region EP550_11190 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD EP550_11190 IPR001451 Hexapeptide repeat EP550_11200 IPR023707 Outer membrane protein assembly factor BamA EP550_11200 IPR034746 POTRA domain EP550_11200 IPR000184 Bacterial surface antigen (D15) EP550_11200 IPR010827 POTRA domain, BamA/TamA-like EP550_11200 IPR039910 Surface antigen D15-like EP550_11205 IPR001478 PDZ domain EP550_11205 IPR041489 PDZ domain 6 EP550_11205 IPR036034 PDZ superfamily EP550_11205 IPR008915 Peptidase M50 EP550_11205 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase EP550_11210 IPR036169 DXP reductoisomerase, C-terminal domain superfamily EP550_11210 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal EP550_11210 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal EP550_11210 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase EP550_11210 IPR036291 NAD(P)-binding domain superfamily EP550_11210 IPR026877 DXP reductoisomerase C-terminal domain EP550_11215 IPR000374 Phosphatidate cytidylyltransferase EP550_11220 IPR036424 Decaprenyl diphosphate synthase-like superfamily EP550_11220 IPR001441 Decaprenyl diphosphate synthase-like EP550_11220 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site EP550_11225 IPR002661 Ribosome recycling factor EP550_11225 IPR023584 Ribosome recycling factor domain EP550_11225 IPR036191 RRF superfamily EP550_11230 IPR001048 Aspartate/glutamate/uridylate kinase EP550_11230 IPR011817 Uridylate kinase EP550_11230 IPR036393 Acetylglutamate kinase-like superfamily EP550_11230 IPR015963 Uridylate kinase, bacteria EP550_11235 IPR006638 Elp3/MiaB/NifB EP550_11235 IPR038135 Methylthiotransferase, N-terminal domain superfamily EP550_11235 IPR005840 Ribosomal protein S12 methylthiotransferase RimO EP550_11235 IPR041582 RimO, TRAM domain EP550_11235 IPR005839 Methylthiotransferase EP550_11235 IPR020612 Methylthiotransferase, conserved site EP550_11235 IPR002792 TRAM domain EP550_11235 IPR007197 Radical SAM EP550_11235 IPR023404 Radical SAM, alpha/beta horseshoe EP550_11235 IPR013848 Methylthiotransferase, N-terminal EP550_11245 IPR003594 Histidine kinase/HSP90-like ATPase EP550_11245 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP550_11245 IPR013767 PAS fold EP550_11245 IPR035965 PAS domain superfamily EP550_11245 IPR000014 PAS domain EP550_11245 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP550_11245 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP550_11245 IPR005467 Histidine kinase domain EP550_11245 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_11250 IPR025944 Sigma-54 interaction domain, conserved site EP550_11250 IPR002197 DNA binding HTH domain, Fis-type EP550_11250 IPR009057 Homeobox-like domain superfamily EP550_11250 IPR011006 CheY-like superfamily EP550_11250 IPR003593 AAA+ ATPase domain EP550_11250 IPR002078 RNA polymerase sigma factor 54 interaction domain EP550_11250 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 EP550_11250 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_11250 IPR010114 DNA-binding transcriptional regulator NtrC EP550_11250 IPR001789 Signal transduction response regulator, receiver domain EP550_11250 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 EP550_11255 IPR023772 DNA-binding HTH domain, TetR-type, conserved site EP550_11255 IPR009057 Homeobox-like domain superfamily EP550_11255 IPR001647 DNA-binding HTH domain, TetR-type EP550_11260 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily EP550_11260 IPR006130 Aspartate/ornithine carbamoyltransferase EP550_11260 IPR024904 Ornithine carbamoyltransferase EP550_11260 IPR002292 Ornithine/putrescine carbamoyltransferase EP550_11260 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain EP550_11260 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding EP550_11270 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily EP550_11270 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site EP550_11270 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase EP550_11280 IPR023080 D-amino acid dehydrogenase DadA EP550_11280 IPR006076 FAD dependent oxidoreductase EP550_11280 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_11305 IPR000362 Fumarate lyase family EP550_11305 IPR008948 L-Aspartase-like EP550_11305 IPR020557 Fumarate lyase, conserved site EP550_11305 IPR018951 Fumarase C, C-terminal EP550_11305 IPR024083 Fumarase/histidase, N-terminal EP550_11305 IPR005677 Fumarate hydratase, class II EP550_11305 IPR022761 Fumarate lyase, N-terminal EP550_11310 IPR016040 NAD(P)-binding domain EP550_11310 IPR005886 UDP-glucose 4-epimerase EP550_11310 IPR036291 NAD(P)-binding domain superfamily EP550_11315 IPR017463 Sulphur relay, TusD/DsrE EP550_11315 IPR003787 Sulphur relay, DsrE/F-like protein EP550_11315 IPR027396 DsrEFH-like EP550_11335 IPR000620 EamA domain EP550_11340 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_11340 IPR004839 Aminotransferase, class I/classII EP550_11340 IPR015424 Pyridoxal phosphate-dependent transferase EP550_11340 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_11340 IPR036390 Winged helix DNA-binding domain superfamily EP550_11340 IPR000524 Transcription regulator HTH, GntR EP550_11340 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_11345 IPR011991 ArsR-like helix-turn-helix domain EP550_11345 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_11345 IPR002577 Helix-turn-helix, HxlR type EP550_11345 IPR036390 Winged helix DNA-binding domain superfamily EP550_11350 IPR005110 MoeA, N-terminal and linker domain EP550_11350 IPR036135 MoeA, N-terminal and linker domain superfamily EP550_11350 IPR036688 MoeA, C-terminal, domain IV superfamily EP550_11350 IPR038987 Molybdopterin biosynthesis protein MoeA-like EP550_11350 IPR005111 MoeA, C-terminal, domain IV EP550_11350 IPR036425 MoaB/Mog-like domain superfamily EP550_11350 IPR001453 MoaB/Mog domain EP550_11350 IPR008284 Molybdenum cofactor biosynthesis, conserved site EP550_11355 IPR023045 Molybdenum cofactor biosynthesis C EP550_11355 IPR036425 MoaB/Mog-like domain superfamily EP550_11355 IPR001453 MoaB/Mog domain EP550_11355 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA EP550_11355 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily EP550_11355 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain EP550_11360 IPR003448 Molybdopterin biosynthesis MoaE EP550_11360 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily EP550_11370 IPR010505 Molybdenum cofactor synthesis C-terminal EP550_11370 IPR006638 Elp3/MiaB/NifB EP550_11370 IPR013483 Molybdenum cofactor biosynthesis protein A EP550_11370 IPR013785 Aldolase-type TIM barrel EP550_11370 IPR007197 Radical SAM EP550_11370 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site EP550_11375 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site EP550_11375 IPR006657 Molybdopterin dinucleotide-binding domain EP550_11375 IPR006656 Molybdopterin oxidoreductase EP550_11375 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain EP550_11375 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain EP550_11375 IPR009010 Aspartate decarboxylase-like domain superfamily EP550_11380 IPR025877 MobA-like NTP transferase EP550_11380 IPR013482 Molybdenum cofactor guanylyltransferase EP550_11380 IPR029044 Nucleotide-diphospho-sugar transferases EP550_11385 IPR006656 Molybdopterin oxidoreductase EP550_11385 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily EP550_11385 IPR007419 BFD-like [2Fe-2S]-binding domain EP550_11385 IPR006657 Molybdopterin dinucleotide-binding domain EP550_11385 IPR009010 Aspartate decarboxylase-like domain superfamily EP550_11385 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain EP550_11385 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site EP550_11385 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain EP550_11390 IPR017121 Nitrite reductase [NAD(P)H], large subunit EP550_11390 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily EP550_11390 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain EP550_11390 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily EP550_11390 IPR007419 BFD-like [2Fe-2S]-binding domain EP550_11390 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain EP550_11390 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily EP550_11390 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_11390 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site EP550_11390 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB EP550_11390 IPR023753 FAD/NAD(P)-binding domain EP550_11390 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal EP550_11395 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_11395 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal EP550_11395 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily EP550_11395 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type EP550_11395 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site EP550_11395 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB EP550_11395 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily EP550_11395 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain EP550_11395 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain EP550_11395 IPR007419 BFD-like [2Fe-2S]-binding domain EP550_11395 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP550_11395 IPR023753 FAD/NAD(P)-binding domain EP550_11405 IPR039420 Transcriptional regulatory protein WalR-like EP550_11405 IPR001789 Signal transduction response regulator, receiver domain EP550_11405 IPR016032 Signal transduction response regulator, C-terminal effector EP550_11405 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_11405 IPR001867 OmpR/PhoB-type DNA-binding domain EP550_11405 IPR011006 CheY-like superfamily EP550_11410 IPR017871 ABC transporter, conserved site EP550_11410 IPR005890 Nitrate transport ATP-binding subunit C/D EP550_11410 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_11410 IPR003439 ABC transporter-like EP550_11410 IPR003593 AAA+ ATPase domain EP550_11420 IPR001126 UmuC domain EP550_11420 IPR025188 Domain of unknown function DUF4113 EP550_11420 IPR036775 DNA polymerase, Y-family, little finger domain superfamily EP550_11420 IPR017961 DNA polymerase, Y-family, little finger domain EP550_11425 IPR036441 Dehydroquinase, class II superfamily EP550_11425 IPR018509 Dehydroquinase, class II, conserved site EP550_11425 IPR001874 Dehydroquinase, class II EP550_11430 IPR001249 Acetyl-CoA biotin carboxyl carrier EP550_11430 IPR000089 Biotin/lipoyl attachment EP550_11430 IPR011053 Single hybrid motif EP550_11430 IPR001882 Biotin-binding site EP550_11435 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase EP550_11435 IPR011764 Biotin carboxylation domain EP550_11435 IPR005482 Biotin carboxylase, C-terminal EP550_11435 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain EP550_11435 IPR016185 Pre-ATP-grasp domain superfamily EP550_11435 IPR011054 Rudiment single hybrid motif EP550_11435 IPR005481 Biotin carboxylase-like, N-terminal domain EP550_11435 IPR011761 ATP-grasp fold EP550_11435 IPR013815 ATP-grasp fold, subdomain 1 EP550_11445 IPR024989 Major facilitator superfamily associated domain EP550_11445 IPR026032 Probable 3-phenylpropionic acid transporter EP550_11445 IPR036259 MFS transporter superfamily EP550_11470 IPR031807 HicB-like antitoxin of toxin-antitoxin system EP550_11470 IPR035069 TTHA1013/TTHA0281-like EP550_11660 IPR001525 C-5 cytosine methyltransferase EP550_11660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_11745 IPR027283 Glutamate synthase large subunit-like protein, bacteria EP550_11745 IPR002932 Glutamate synthase domain EP550_11745 IPR013785 Aldolase-type TIM barrel EP550_11745 IPR024188 Glutamate synthase large subunit-like protein EP550_11760 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily EP550_11760 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase EP550_11760 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal EP550_11760 IPR006094 FAD linked oxidase, N-terminal EP550_11760 IPR016166 FAD-binding domain, PCMH-type EP550_11760 IPR016169 FAD-binding, type PCMH, subdomain 2 EP550_11760 IPR016167 FAD-binding, type PCMH, subdomain 1 EP550_11760 IPR036318 FAD-binding, type PCMH-like superfamily EP550_11765 IPR023485 Phosphotyrosine protein phosphatase I EP550_11765 IPR036196 Phosphotyrosine protein phosphatase I superfamily EP550_11765 IPR017867 Protein-tyrosine phosphatase, low molecular weight EP550_11775 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA EP550_11775 IPR018211 Alcohol dehydrogenase, iron-type, conserved site EP550_11775 IPR039697 Iron-type alcohol dehydrogenase-like EP550_11780 IPR029069 HotDog domain superfamily EP550_11780 IPR006683 Thioesterase domain EP550_11785 IPR008475 Bacterial phospholipase C, C-terminal domain EP550_11785 IPR017850 Alkaline-phosphatase-like, core domain superfamily EP550_11785 IPR017767 Bacterial phospholipase C, phosphocholine-specific EP550_11785 IPR007312 Phosphoesterase EP550_11785 IPR006311 Twin-arginine translocation pathway, signal sequence EP550_11790 IPR022754 DNA polymerase III, gamma subunit, domain III EP550_11790 IPR001270 ClpA/B family EP550_11790 IPR012763 DNA polymerase III, subunit gamma/ tau EP550_11790 IPR021029 DNA polymerase III, tau subunit, domain V EP550_11790 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_11790 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily EP550_11790 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal EP550_11790 IPR003593 AAA+ ATPase domain EP550_11790 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV EP550_11795 IPR020846 Major facilitator superfamily domain EP550_11795 IPR011701 Major facilitator superfamily EP550_11795 IPR036259 MFS transporter superfamily EP550_11815 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_11815 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_11815 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase EP550_11815 IPR036291 NAD(P)-binding domain superfamily EP550_11820 IPR016039 Thiolase-like EP550_11820 IPR012806 Acetyl-CoA C-acyltransferase FadI EP550_11820 IPR002155 Thiolase EP550_11820 IPR020617 Thiolase, C-terminal EP550_11820 IPR020610 Thiolase, active site EP550_11820 IPR020616 Thiolase, N-terminal EP550_11820 IPR020613 Thiolase, conserved site EP550_11830 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_11830 IPR000847 Transcription regulator HTH, LysR EP550_11830 IPR036390 Winged helix DNA-binding domain superfamily EP550_11830 IPR005119 LysR, substrate-binding EP550_11840 IPR004778 Homoserine/Threonine efflux protein EP550_11840 IPR001123 Amino acid exporter protein, LeuE-type EP550_11845 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP550_11845 IPR036390 Winged helix DNA-binding domain superfamily EP550_11845 IPR019888 Transcription regulator AsnC-type EP550_11845 IPR011008 Dimeric alpha-beta barrel EP550_11845 IPR000485 AsnC-type HTH domain EP550_11845 IPR011991 ArsR-like helix-turn-helix domain EP550_11845 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP550_11845 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_11850 IPR004711 Benzoate transporter EP550_11855 IPR003416 MgtC/SapB/SrpB/YhiD family EP550_11860 IPR036412 HAD-like superfamily EP550_11860 IPR008250 P-type ATPase, A domain superfamily EP550_11860 IPR023298 P-type ATPase, transmembrane domain superfamily EP550_11860 IPR018303 P-type ATPase, phosphorylation site EP550_11860 IPR023299 P-type ATPase, cytoplasmic domain N EP550_11860 IPR004014 Cation-transporting P-type ATPase, N-terminal EP550_11860 IPR006068 Cation-transporting P-type ATPase, C-terminal EP550_11860 IPR001757 P-type ATPase EP550_11860 IPR023214 HAD superfamily EP550_11860 IPR006415 P-type ATPase, subfamily IIIB EP550_11875 IPR006015 Universal stress protein A family EP550_11875 IPR006016 UspA EP550_11875 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_11880 IPR017871 ABC transporter, conserved site EP550_11880 IPR003439 ABC transporter-like EP550_11880 IPR032781 ABC-transporter extension domain EP550_11880 IPR003593 AAA+ ATPase domain EP550_11880 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_11900 IPR010105 TonB-dependent siderophore receptor EP550_11900 IPR010917 TonB-dependent receptor, conserved site EP550_11900 IPR012910 TonB-dependent receptor, plug domain EP550_11900 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_11900 IPR039423 TonB-dependent receptor-like EP550_11900 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_11900 IPR010916 TonB box, conserved site EP550_11900 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP550_11935 IPR010920 LSM domain superfamily EP550_11935 IPR011066 Mechanosensitive ion channel MscS, C-terminal EP550_11935 IPR006685 Mechanosensitive ion channel MscS EP550_11935 IPR030192 Miniconductance mechanosensitive channel YbdG EP550_11940 IPR039426 Vitamin B12 transporter BtuB-like EP550_11940 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_11940 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_11940 IPR012910 TonB-dependent receptor, plug domain EP550_11940 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP550_11940 IPR010105 TonB-dependent siderophore receptor EP550_11945 IPR001647 DNA-binding HTH domain, TetR-type EP550_11945 IPR009057 Homeobox-like domain superfamily EP550_11960 IPR036390 Winged helix DNA-binding domain superfamily EP550_11960 IPR011991 ArsR-like helix-turn-helix domain EP550_11960 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP550_11960 IPR019888 Transcription regulator AsnC-type EP550_11960 IPR011008 Dimeric alpha-beta barrel EP550_11960 IPR000485 AsnC-type HTH domain EP550_11960 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP550_11960 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_11965 IPR002701 Chorismate mutase II, prokaryotic-type EP550_11965 IPR008240 Chorismate mutase, periplasmic EP550_11965 IPR036263 Chorismate mutase type II superfamily EP550_11975 IPR036291 NAD(P)-binding domain superfamily EP550_11975 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_11985 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase EP550_11985 IPR042097 Aminopeptidase N-like , N-terminal EP550_11985 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily EP550_11985 IPR027268 Peptidase M4/M1, CTD superfamily EP550_11985 IPR012779 Peptidase M1, alanyl aminopeptidase EP550_11985 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal EP550_11985 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily EP550_11985 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold EP550_11985 IPR014782 Peptidase M1, membrane alanine aminopeptidase EP550_12000 IPR000417 Hydroxyethylthiazole kinase EP550_12000 IPR029056 Ribokinase-like EP550_12005 IPR029442 GyrI-like small molecule binding domain EP550_12005 IPR010499 Bacterial transcription activator, effector binding EP550_12005 IPR011256 Regulatory factor, effector binding domain superfamily EP550_12015 IPR003593 AAA+ ATPase domain EP550_12015 IPR010285 DNA helicase Pif1-like EP550_12015 IPR029491 Helicase Helix-turn-helix domain EP550_12015 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_12020 IPR039697 Iron-type alcohol dehydrogenase-like EP550_12020 IPR018211 Alcohol dehydrogenase, iron-type, conserved site EP550_12020 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA EP550_12030 IPR029016 GAF-like domain superfamily EP550_12035 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_12035 IPR016161 Aldehyde/histidinol dehydrogenase EP550_12035 IPR015590 Aldehyde dehydrogenase domain EP550_12035 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_12035 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP550_12035 IPR016160 Aldehyde dehydrogenase, cysteine active site EP550_12040 IPR002293 Amino acid/polyamine transporter I EP550_12045 IPR010628 Ethanolamine ammonia lyase large subunit EP550_12045 IPR013785 Aldolase-type TIM barrel EP550_12050 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal EP550_12050 IPR009246 Ethanolamine ammonia-lyase light chain EP550_12050 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal EP550_12055 IPR022955 GMP synthase EP550_12055 IPR017926 Glutamine amidotransferase EP550_12055 IPR022310 NAD/GMP synthase EP550_12055 IPR004739 GMP synthase, glutamine amidotransferase EP550_12055 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_12055 IPR001674 GMP synthase, C-terminal EP550_12055 IPR029062 Class I glutamine amidotransferase-like EP550_12055 IPR025777 GMP synthetase ATP pyrophosphatase domain EP550_12070 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily EP550_12070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_12070 IPR022861 Glutamine-tRNA ligase, bacterial EP550_12070 IPR000924 Glutamyl/glutaminyl-tRNA synthetase EP550_12070 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal EP550_12070 IPR004514 Glutamine-tRNA synthetase EP550_12070 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily EP550_12070 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain EP550_12070 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site EP550_12070 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain EP550_12075 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain EP550_12075 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site EP550_12075 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase EP550_12075 IPR029000 Cyclophilin-like domain superfamily EP550_12080 IPR010138 UDP-2,3-diacylglucosamine hydrolase EP550_12080 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type EP550_12090 IPR033878 Nitroreductase NfsB-like EP550_12090 IPR000415 Nitroreductase-like EP550_12090 IPR029479 Nitroreductase EP550_12100 IPR005001 RNA-binding protein Hfq EP550_12100 IPR010920 LSM domain superfamily EP550_12105 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_12105 IPR018022 IPP transferase EP550_12105 IPR039657 Dimethylallyltransferase EP550_12110 IPR013507 DNA mismatch repair protein, S5 domain 2-like EP550_12110 IPR014762 DNA mismatch repair, conserved site EP550_12110 IPR042120 MutL, C-terminal domain, dimerisation subdomain EP550_12110 IPR020667 DNA mismatch repair protein, MutL EP550_12110 IPR014790 MutL, C-terminal, dimerisation EP550_12110 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms EP550_12110 IPR002099 DNA mismatch repair protein family, N-terminal EP550_12110 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP550_12110 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_12110 IPR042121 MutL, C-terminal domain, regulatory subdomain EP550_12110 IPR037198 MutL, C-terminal domain superfamily EP550_12110 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_12115 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE EP550_12115 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_12120 IPR036986 RNA-binding S4 domain superfamily EP550_12120 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site EP550_12120 IPR006225 Pseudouridine synthase, RluC/RluD EP550_12120 IPR002942 RNA-binding S4 domain EP550_12120 IPR006145 Pseudouridine synthase, RsuA/RluA EP550_12120 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP550_12135 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site EP550_12135 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain EP550_12135 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F EP550_12135 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP550_12135 IPR006145 Pseudouridine synthase, RsuA/RluA EP550_12135 IPR036986 RNA-binding S4 domain superfamily EP550_12135 IPR002942 RNA-binding S4 domain EP550_12145 IPR007382 Uncharacterised protein family UPF0756, transmembrame EP550_12150 IPR036390 Winged helix DNA-binding domain superfamily EP550_12150 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain EP550_12150 IPR005119 LysR, substrate-binding EP550_12150 IPR000847 Transcription regulator HTH, LysR EP550_12150 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_12165 IPR036259 MFS transporter superfamily EP550_12165 IPR020846 Major facilitator superfamily domain EP550_12165 IPR011701 Major facilitator superfamily EP550_12170 IPR028325 Voltage-gated potassium channel EP550_12170 IPR014710 RmlC-like jelly roll fold EP550_12170 IPR000595 Cyclic nucleotide-binding domain EP550_12170 IPR018490 Cyclic nucleotide-binding-like EP550_12170 IPR018488 Cyclic nucleotide-binding, conserved site EP550_12170 IPR005821 Ion transport domain EP550_12180 IPR015929 Aconitase B, swivel EP550_12180 IPR015932 Aconitase, domain 2 EP550_12180 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 EP550_12180 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain EP550_12180 IPR004406 Aconitase B EP550_12180 IPR018136 Aconitase family, 4Fe-4S cluster binding site EP550_12180 IPR036288 Aconitase B, HEAT-like domain superfamily EP550_12180 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel EP550_12180 IPR015933 Aconitase B, HEAT-like domain EP550_12180 IPR036008 Aconitase, iron-sulfur domain EP550_12200 IPR035243 TamA, POTRA domain 1 EP550_12200 IPR034746 POTRA domain EP550_12200 IPR000184 Bacterial surface antigen (D15) EP550_12200 IPR039910 Surface antigen D15-like EP550_12200 IPR010827 POTRA domain, BamA/TamA-like EP550_12205 IPR023727 Lysophospholipid transporter LplT EP550_12205 IPR011701 Major facilitator superfamily EP550_12205 IPR036259 MFS transporter superfamily EP550_12210 IPR009078 Ferritin-like superfamily EP550_12210 IPR011566 Ubiquinone biosynthesis protein Coq7 EP550_12220 IPR008146 Glutamine synthetase, catalytic domain EP550_12220 IPR036651 Glutamine synthetase, N-terminal domain superfamily EP550_12220 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain EP550_12220 IPR027303 Glutamine synthetase, glycine-rich site EP550_12225 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_12225 IPR011006 CheY-like superfamily EP550_12225 IPR001867 OmpR/PhoB-type DNA-binding domain EP550_12225 IPR039420 Transcriptional regulatory protein WalR-like EP550_12225 IPR001789 Signal transduction response regulator, receiver domain EP550_12230 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_12230 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_12230 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal EP550_12230 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP550_12230 IPR005467 Histidine kinase domain EP550_12230 IPR029016 GAF-like domain superfamily EP550_12230 IPR003594 Histidine kinase/HSP90-like ATPase EP550_12230 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP550_12230 IPR025201 Sensor protein KdpD, transmembrane domain EP550_12230 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP550_12230 IPR038318 KdpD, transmembrane domain superfamily EP550_12235 IPR003820 Potassium-transporting ATPase C chain EP550_12240 IPR023299 P-type ATPase, cytoplasmic domain N EP550_12240 IPR018303 P-type ATPase, phosphorylation site EP550_12240 IPR023298 P-type ATPase, transmembrane domain superfamily EP550_12240 IPR008250 P-type ATPase, A domain superfamily EP550_12240 IPR036412 HAD-like superfamily EP550_12240 IPR001757 P-type ATPase EP550_12240 IPR006391 P-type ATPase, B chain, subfamily IA EP550_12245 IPR004623 Potassium-transporting ATPase A chain EP550_12245 IPR023298 P-type ATPase, transmembrane domain superfamily EP550_12260 IPR011009 Protein kinase-like domain superfamily EP550_12260 IPR000719 Protein kinase domain EP550_12260 IPR004147 UbiB domain EP550_12265 IPR035985 Ubiquitin-activating enzyme EP550_12265 IPR000594 THIF-type NAD/FAD binding fold EP550_12265 IPR012730 Molybdopterin synthase sulfurylase MoeB EP550_12270 IPR002563 Flavin reductase like domain EP550_12270 IPR012349 FMN-binding split barrel EP550_12275 IPR025110 AMP-binding enzyme, C-terminal domain EP550_12275 IPR020845 AMP-binding, conserved site EP550_12275 IPR042099 AMP-dependent synthetase-like superfamily EP550_12275 IPR000873 AMP-dependent synthetase/ligase EP550_12280 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_12280 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_12280 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_12280 IPR006089 Acyl-CoA dehydrogenase, conserved site EP550_12280 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_12280 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_12280 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_12285 IPR036291 NAD(P)-binding domain superfamily EP550_12285 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_12285 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_12290 IPR009057 Homeobox-like domain superfamily EP550_12290 IPR018060 DNA binding HTH domain, AraC-type EP550_12290 IPR018062 HTH domain AraC-type, conserved site EP550_12290 IPR020449 Transcription regulator HTH, AraC- type EP550_12295 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP550_12295 IPR015168 SsuA/THI5-like EP550_12295 IPR010067 Aliphatic sulfonates-binding protein EP550_12300 IPR035906 MetI-like superfamily EP550_12300 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_12305 IPR004556 Methyltransferase HemK-like EP550_12305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_12305 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific EP550_12305 IPR002052 DNA methylase, N-6 adenine-specific, conserved site EP550_12305 IPR025714 Methyltransferase domain EP550_12305 IPR040758 Release factor glutamine methyltransferase, N-terminal domain EP550_12310 IPR004373 Peptide chain release factor 1 EP550_12310 IPR000352 Peptide chain release factor class I EP550_12310 IPR005139 Peptide chain release factor EP550_12320 IPR000847 Transcription regulator HTH, LysR EP550_12320 IPR005119 LysR, substrate-binding EP550_12320 IPR036390 Winged helix DNA-binding domain superfamily EP550_12320 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_12340 IPR036661 Luciferase-like domain superfamily EP550_12340 IPR019949 Luciferase family oxidoreductase, group 1 EP550_12340 IPR011251 Luciferase-like domain EP550_12350 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD EP550_12355 IPR001173 Glycosyltransferase 2-like EP550_12355 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA EP550_12355 IPR029044 Nucleotide-diphospho-sugar transferases EP550_12360 IPR002509 NodB homology domain EP550_12360 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel EP550_12360 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB EP550_12360 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal EP550_12370 IPR005177 Bifunctional kinase-pyrophosphorylase EP550_12370 IPR026530 Phosphoenolpyruvate synthase regulatory protein EP550_12375 IPR006319 Phosphoenolpyruvate synthase EP550_12375 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily EP550_12375 IPR008279 PEP-utilising enzyme, mobile domain EP550_12375 IPR018274 PEP-utilising enzyme, active site EP550_12375 IPR000121 PEP-utilising enzyme, C-terminal EP550_12375 IPR013815 ATP-grasp fold, subdomain 1 EP550_12375 IPR023151 PEP-utilising enzyme, conserved site EP550_12375 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding EP550_12375 IPR036637 Phosphohistidine domain superfamily EP550_12375 IPR040442 Pyruvate kinase-like domain superfamily EP550_12385 IPR002429 Cytochrome c oxidase subunit II-like C-terminal EP550_12385 IPR010514 COX aromatic rich motif EP550_12385 IPR008972 Cupredoxin EP550_12385 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain EP550_12385 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily EP550_12385 IPR006333 Cytochrome o ubiquinol oxidase subunit II EP550_12385 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain EP550_12390 IPR014207 Cytochrome o ubiquinol oxidase, subunit I EP550_12390 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site EP550_12390 IPR000883 Cytochrome c oxidase subunit I EP550_12390 IPR036927 Cytochrome c oxidase-like, subunit I superfamily EP550_12390 IPR023616 Cytochrome c oxidase-like, subunit I domain EP550_12395 IPR033946 Ubiquinol oxidase subunit III domain EP550_12395 IPR024791 Cytochrome c oxidase subunit III EP550_12395 IPR000298 Cytochrome c oxidase subunit III-like EP550_12395 IPR035973 Cytochrome c oxidase subunit III-like superfamily EP550_12395 IPR014206 Cytochrome o ubiquinol oxidase, subunit III EP550_12395 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle EP550_12400 IPR014210 Cytochrome o ubiquinol oxidase subunit IV EP550_12400 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes EP550_12405 IPR006369 Protohaem IX farnesyltransferase EP550_12405 IPR030470 UbiA prenyltransferase conserved site EP550_12405 IPR000537 UbiA prenyltransferase family EP550_12410 IPR020815 Ribosomal protein S6, conserved site EP550_12410 IPR020814 Ribosomal protein S6, plastid/chloroplast EP550_12410 IPR000529 Ribosomal protein S6 EP550_12410 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 EP550_12410 IPR035980 Ribosomal protein S6 superfamily EP550_12415 IPR001648 Ribosomal protein S18 EP550_12415 IPR036870 Ribosomal protein S18 superfamily EP550_12415 IPR018275 Ribosomal protein S18, conserved site EP550_12420 IPR020594 Ribosomal protein L9, bacteria/chloroplast EP550_12420 IPR036935 Ribosomal protein L9, N-terminal domain superfamily EP550_12420 IPR036791 Ribosomal protein L9, C-terminal domain superfamily EP550_12420 IPR000244 Ribosomal protein L9 EP550_12420 IPR020069 Ribosomal protein L9, C-terminal EP550_12420 IPR020070 Ribosomal protein L9, N-terminal EP550_12420 IPR009027 Ribosomal protein L9/RNase H1, N-terminal EP550_12425 IPR007693 DNA helicase, DnaB-like, N-terminal EP550_12425 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal EP550_12425 IPR007694 DNA helicase, DnaB-like, C-terminal EP550_12425 IPR007692 DNA helicase, DnaB type EP550_12425 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_12425 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily EP550_12425 IPR003593 AAA+ ATPase domain EP550_12430 IPR029066 PLP-binding barrel EP550_12430 IPR001608 Alanine racemase, N-terminal EP550_12430 IPR011079 Alanine racemase, C-terminal EP550_12430 IPR000821 Alanine racemase EP550_12430 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal EP550_12440 IPR002931 Transglutaminase-like EP550_12440 IPR013589 Bacterial transglutaminase-like, N-terminal EP550_12440 IPR038765 Papain-like cysteine peptidase superfamily EP550_12450 IPR016450 Uncharacterised conserved protein UCP005522 EP550_12450 IPR025841 Circularly permuted ATP-grasp type 2 EP550_12460 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_12460 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG EP550_12460 IPR020595 MnmG-related, conserved site EP550_12460 IPR026904 GidA associated domain 3 EP550_12460 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related EP550_12470 IPR004498 Ribosomal protein L11 methyltransferase EP550_12470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_12480 IPR005412 DNA-binding protein Fis EP550_12480 IPR009057 Homeobox-like domain superfamily EP550_12480 IPR002197 DNA binding HTH domain, Fis-type EP550_12485 IPR036914 Methylglyoxal synthase-like domain superfamily EP550_12485 IPR016193 Cytidine deaminase-like EP550_12485 IPR011607 Methylglyoxal synthase-like domain EP550_12485 IPR002695 Bifunctional purine biosynthesis protein PurH-like EP550_12485 IPR024051 AICAR transformylase, duplicated domain superfamily EP550_12490 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily EP550_12490 IPR020560 Phosphoribosylglycinamide synthetase, C-domain EP550_12490 IPR000115 Phosphoribosylglycinamide synthetase EP550_12490 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EP550_12490 IPR011761 ATP-grasp fold EP550_12490 IPR020559 Phosphoribosylglycinamide synthetase, conserved site EP550_12490 IPR016185 Pre-ATP-grasp domain superfamily EP550_12490 IPR011054 Rudiment single hybrid motif EP550_12490 IPR013815 ATP-grasp fold, subdomain 1 EP550_12490 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal EP550_12495 IPR004872 Lipoprotein NlpA family EP550_12500 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_12500 IPR018449 NIL domain EP550_12500 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain EP550_12500 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal EP550_12500 IPR017871 ABC transporter, conserved site EP550_12500 IPR003439 ABC transporter-like EP550_12500 IPR026253 Methionine import ATP-binding protein MetN EP550_12500 IPR003593 AAA+ ATPase domain EP550_12505 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_12505 IPR035906 MetI-like superfamily EP550_12510 IPR001279 Metallo-beta-lactamase EP550_12510 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP550_12510 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain EP550_12510 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain EP550_12510 IPR017782 Hydroxyacylglutathione hydrolase EP550_12520 IPR023954 C4-dicarboxylate transport protein EP550_12520 IPR036458 Sodium:dicarboxylate symporter superfamily EP550_12520 IPR018107 Sodium:dicarboxylate symporter, conserved site EP550_12520 IPR001991 Sodium:dicarboxylate symporter EP550_12540 IPR011042 Six-bladed beta-propeller, TolB-like EP550_12540 IPR012938 Glucose/Sorbosone dehydrogenase EP550_12540 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase EP550_12545 IPR000620 EamA domain EP550_12550 IPR004380 Aspartate racemase EP550_12550 IPR033134 Asp/Glu racemase, active site 2 EP550_12550 IPR015942 Asp/Glu/hydantoin racemase EP550_12550 IPR001920 Asp/Glu racemase EP550_12550 IPR018187 Asp/Glu racemase, active site 1 EP550_12560 IPR003399 Mce/MlaD EP550_12565 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type EP550_12565 IPR007498 Intermembrane transport protein PqiA-like EP550_12575 IPR006512 YidE/YbjL duplication EP550_12575 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily EP550_12575 IPR006037 Regulator of K+ conductance, C-terminal EP550_12575 IPR022457 Aspartate-alanine antiporter EP550_12580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_12580 IPR015424 Pyridoxal phosphate-dependent transferase EP550_12580 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site EP550_12580 IPR004839 Aminotransferase, class I/classII EP550_12580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_12580 IPR022518 Aspartate 4-decarboxylase EP550_12605 IPR004736 MFS transporter, metabolite:H symporter EP550_12605 IPR036259 MFS transporter superfamily EP550_12605 IPR005828 Major facilitator, sugar transporter-like EP550_12605 IPR020846 Major facilitator superfamily domain EP550_12605 IPR036292 Proline/betaine transporter ProP, C-terminal EP550_12605 IPR005829 Sugar transporter, conserved site EP550_12605 IPR015041 Osmosensory transporter coiled coil EP550_12645 IPR025668 Transposase DDE domain EP550_12660 IPR011711 GntR, C-terminal EP550_12660 IPR008920 Transcription regulator FadR/GntR, C-terminal EP550_12660 IPR000524 Transcription regulator HTH, GntR EP550_12660 IPR036390 Winged helix DNA-binding domain superfamily EP550_12660 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_12670 IPR004445 Sodium/glutamate symport carrier protein GltS EP550_12675 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit EP550_12675 IPR000073 Alpha/beta hydrolase fold-1 EP550_12675 IPR029058 Alpha/Beta hydrolase fold EP550_12700 IPR005220 Bacterial OB-fold EP550_12700 IPR016052 Bacteriophage 933W, L0136 EP550_12700 IPR036700 Bacterial OB-fold superfamily EP550_12730 IPR011265 GABA permease EP550_12730 IPR004840 Amino acid permease, conserved site EP550_12730 IPR004841 Amino acid permease/ SLC12A domain EP550_12735 IPR015590 Aldehyde dehydrogenase domain EP550_12735 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_12735 IPR016160 Aldehyde dehydrogenase, cysteine active site EP550_12735 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_12735 IPR016161 Aldehyde/histidinol dehydrogenase EP550_12735 IPR010061 Methylmalonate-semialdehyde dehydrogenase EP550_12740 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_12740 IPR005814 Aminotransferase class-III EP550_12740 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_12740 IPR015424 Pyridoxal phosphate-dependent transferase EP550_12745 IPR000847 Transcription regulator HTH, LysR EP550_12745 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_12745 IPR036390 Winged helix DNA-binding domain superfamily EP550_12745 IPR005119 LysR, substrate-binding EP550_12770 IPR008271 Serine/threonine-protein kinase, active site EP550_12770 IPR017441 Protein kinase, ATP binding site EP550_12770 IPR000719 Protein kinase domain EP550_12770 IPR011009 Protein kinase-like domain superfamily EP550_12790 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD EP550_12790 IPR000905 Gcp-like domain EP550_12790 IPR017860 Peptidase M22, conserved site EP550_12790 IPR017861 Kae1/TsaD family EP550_12795 IPR001911 Ribosomal protein S21 EP550_12795 IPR018278 Ribosomal protein S21, conserved site EP550_12795 IPR038380 Ribosomal protein S21 superfamily EP550_12800 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like EP550_12800 IPR042184 YqeY/Aim41, N-terminal domain EP550_12800 IPR019004 Uncharacterised protein YqeY/Aim41 EP550_12800 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 EP550_12805 IPR001915 Peptidase M48 EP550_12805 IPR030873 Beta-barrel assembly-enhancing protease EP550_12805 IPR011990 Tetratricopeptide-like helical domain superfamily EP550_12810 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain EP550_12810 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EP550_12810 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site EP550_12810 IPR023756 Glyoxylate/hydroxypyruvate reductase B EP550_12810 IPR036291 NAD(P)-binding domain superfamily EP550_12825 IPR035584 Amidophosphoribosyltransferase, N-terminal EP550_12825 IPR005854 Amidophosphoribosyltransferase EP550_12825 IPR029057 Phosphoribosyltransferase-like EP550_12825 IPR000836 Phosphoribosyltransferase domain EP550_12825 IPR029055 Nucleophile aminohydrolases, N-terminal EP550_12825 IPR017932 Glutamine amidotransferase type 2 domain EP550_12830 IPR003825 Colicin V production, CvpA EP550_12835 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 EP550_12835 IPR013785 Aldolase-type TIM barrel EP550_12835 IPR001295 Dihydroorotate dehydrogenase, conserved site EP550_12835 IPR005720 Dihydroorotate dehydrogenase domain EP550_12835 IPR005719 Dihydroorotate dehydrogenase, class 2 EP550_12855 IPR036291 NAD(P)-binding domain superfamily EP550_12855 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent EP550_12855 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP550_12855 IPR013328 6-phosphogluconate dehydrogenase, domain 2 EP550_12855 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal EP550_12855 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal EP550_12860 IPR000415 Nitroreductase-like EP550_12860 IPR029479 Nitroreductase EP550_12860 IPR026021 Putative NAD(P)H nitroreductase YdjA-like EP550_12870 IPR001650 Helicase, C-terminal EP550_12870 IPR023554 ATP-dependent RNA helicase RhlB type EP550_12870 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site EP550_12870 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_12870 IPR011545 DEAD/DEAH box helicase domain EP550_12870 IPR014014 RNA helicase, DEAD-box type, Q motif EP550_12870 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP550_12875 IPR002059 Cold-shock protein, DNA-binding EP550_12875 IPR012156 Cold shock, CspA EP550_12875 IPR012340 Nucleic acid-binding, OB-fold EP550_12875 IPR011129 Cold shock domain EP550_12875 IPR019844 Cold-shock (CSD) domain EP550_12885 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria EP550_12885 IPR013324 RNA polymerase sigma factor, region 3/4-like EP550_12885 IPR007627 RNA polymerase sigma-70 region 2 EP550_12885 IPR009042 RNA polymerase sigma-70 region 1.2 EP550_12885 IPR000943 RNA polymerase sigma-70 EP550_12885 IPR014284 RNA polymerase sigma-70 like domain EP550_12885 IPR007630 RNA polymerase sigma-70 region 4 EP550_12885 IPR013325 RNA polymerase sigma factor, region 2 EP550_12890 IPR006696 Protein of unknown function DUF423 EP550_12900 IPR033983 Thiazole synthase ThiG EP550_12900 IPR008867 Thiazole synthase EP550_12900 IPR013785 Aldolase-type TIM barrel EP550_12910 IPR005583 Peroxide stress protein YaaA EP550_12920 IPR013471 Ribonuclease Z/BN EP550_12920 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP550_12920 IPR001279 Metallo-beta-lactamase EP550_12925 IPR001160 Peptidase M20C, Xaa-His dipeptidase EP550_12925 IPR011650 Peptidase M20, dimerisation domain EP550_12925 IPR002933 Peptidase M20 EP550_12935 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta EP550_12935 IPR001986 Enolpyruvate transferase domain EP550_12935 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site EP550_12935 IPR036968 Enolpyruvate transferase domain superfamily EP550_12935 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase EP550_12940 IPR036979 Chorismate mutase domain superfamily EP550_12940 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase EP550_12940 IPR001086 Prephenate dehydratase EP550_12940 IPR002912 ACT domain EP550_12940 IPR036263 Chorismate mutase type II superfamily EP550_12940 IPR002701 Chorismate mutase II, prokaryotic-type EP550_12940 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain EP550_12940 IPR018528 Prephenate dehydratase, conserved site EP550_12945 IPR000801 Putative esterase EP550_12945 IPR029058 Alpha/Beta hydrolase fold EP550_12950 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_12950 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_12950 IPR006089 Acyl-CoA dehydrogenase, conserved site EP550_12950 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_12950 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_12950 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_12950 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_12955 IPR036458 Sodium:dicarboxylate symporter superfamily EP550_12955 IPR018107 Sodium:dicarboxylate symporter, conserved site EP550_12955 IPR001991 Sodium:dicarboxylate symporter EP550_12955 IPR023954 C4-dicarboxylate transport protein EP550_12965 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily EP550_12965 IPR017459 Glycosyl transferase family 3, N-terminal domain EP550_12965 IPR000312 Glycosyl transferase, family 3 EP550_12965 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily EP550_12965 IPR005940 Anthranilate phosphoribosyl transferase EP550_12970 IPR009749 Protein of unknown function DUF1315 EP550_12975 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal EP550_12975 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal EP550_12975 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily EP550_12975 IPR002504 NAD kinase EP550_12980 IPR001264 Glycosyl transferase, family 51 EP550_12980 IPR028166 Bifunctional transglycosylase second domain EP550_12980 IPR012338 Beta-lactamase/transpeptidase-like EP550_12980 IPR001460 Penicillin-binding protein, transpeptidase EP550_12980 IPR036950 Penicillin binding protein transglycosylase domain EP550_12980 IPR023346 Lysozyme-like domain superfamily EP550_12980 IPR011813 Penicillin-binding protein 1B EP550_12990 IPR003561 Mutator MutT EP550_12990 IPR020476 NUDIX hydrolase EP550_12990 IPR020084 NUDIX hydrolase, conserved site EP550_12990 IPR000086 NUDIX hydrolase domain EP550_12990 IPR015797 NUDIX hydrolase-like domain superfamily EP550_13000 IPR005467 Histidine kinase domain EP550_13000 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP550_13000 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP550_13000 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_13000 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP550_13000 IPR013727 Two-component sensor kinase, N-terminal EP550_13000 IPR003594 Histidine kinase/HSP90-like ATPase EP550_13005 IPR011006 CheY-like superfamily EP550_13005 IPR039420 Transcriptional regulatory protein WalR-like EP550_13005 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_13005 IPR001867 OmpR/PhoB-type DNA-binding domain EP550_13005 IPR001789 Signal transduction response regulator, receiver domain EP550_13015 IPR013369 Type II secretion system GspE EP550_13015 IPR037257 General secretory system II, protein E, N-terminal superfamily EP550_13015 IPR042181 Type II secretion system, protein E, N-terminal EP550_13015 IPR001482 Type II/IV secretion system protein EP550_13015 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_13025 IPR023370 TrmO-like, N-terminal domain EP550_13025 IPR036414 YaeB, N-terminal domain superfamily EP550_13025 IPR036413 YaeB-like superfamily EP550_13025 IPR040372 YaeB-like EP550_13025 IPR023368 Uncharacterised protein family UPF0066, conserved site EP550_13025 IPR041369 TrmO, C-terminal EP550_13030 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP550_13030 IPR017927 FAD-binding domain, ferredoxin reductase-type EP550_13030 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain EP550_13030 IPR017938 Riboflavin synthase-like beta-barrel EP550_13030 IPR033892 Ferredoxin--NADP reductase, bacteria EP550_13030 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase EP550_13030 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP550_13035 IPR003719 Phenazine biosynthesis PhzF protein EP550_13040 IPR015424 Pyridoxal phosphate-dependent transferase EP550_13040 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_13040 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_13040 IPR000524 Transcription regulator HTH, GntR EP550_13040 IPR036390 Winged helix DNA-binding domain superfamily EP550_13040 IPR004839 Aminotransferase, class I/classII EP550_13040 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_13050 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site EP550_13050 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain EP550_13055 IPR000390 Small multidrug resistance protein family EP550_13060 IPR017871 ABC transporter, conserved site EP550_13060 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_13060 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type EP550_13060 IPR003593 AAA+ ATPase domain EP550_13060 IPR003439 ABC transporter-like EP550_13065 IPR035906 MetI-like superfamily EP550_13065 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain EP550_13065 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_13070 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain EP550_13070 IPR030199 Histidine transport system permease protein HisQ EP550_13070 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_13070 IPR035906 MetI-like superfamily EP550_13075 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP550_13075 IPR018313 Solute-binding protein family 3, conserved site EP550_13075 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter EP550_13080 IPR036390 Winged helix DNA-binding domain superfamily EP550_13080 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_13080 IPR005119 LysR, substrate-binding EP550_13080 IPR000847 Transcription regulator HTH, LysR EP550_13085 IPR006143 RND efflux pump, membrane fusion protein EP550_13085 IPR022824 Multidrug resistance protein MdtA EP550_13085 IPR039562 Membrane fusion protein, biotin-lipoyl like domain EP550_13090 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 EP550_13090 IPR001036 Acriflavin resistance protein EP550_13090 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains EP550_13095 IPR010131 RND efflux system, outer membrane lipoprotein, NodT EP550_13095 IPR003423 Outer membrane efflux protein EP550_13100 IPR015424 Pyridoxal phosphate-dependent transferase EP550_13100 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_13100 IPR001085 Serine hydroxymethyltransferase EP550_13100 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site EP550_13100 IPR039429 Serine hydroxymethyltransferase-like domain EP550_13100 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_13130 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_13130 IPR017871 ABC transporter, conserved site EP550_13130 IPR003593 AAA+ ATPase domain EP550_13130 IPR003439 ABC transporter-like EP550_13135 IPR013525 ABC-2 type transporter EP550_13135 IPR000412 ABC-2 transporter EP550_13140 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 EP550_13140 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal EP550_13140 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF EP550_13150 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB EP550_13150 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site EP550_13150 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA EP550_13155 IPR023346 Lysozyme-like domain superfamily EP550_13155 IPR031304 Transglycosylase SLT domain 2 EP550_13155 IPR011757 Lytic transglycosylase MltB EP550_13160 IPR012997 Rare lipoprotein A EP550_13160 IPR036908 RlpA-like domain superfamily EP550_13160 IPR009009 RlpA-like protein, double-psi beta-barrel domain EP550_13160 IPR034718 Endolytic peptidoglycan transglycosylase RlpA EP550_13160 IPR007730 Sporulation-like domain EP550_13180 IPR009057 Homeobox-like domain superfamily EP550_13180 IPR018060 DNA binding HTH domain, AraC-type EP550_13180 IPR018062 HTH domain AraC-type, conserved site EP550_13180 IPR011051 RmlC-like cupin domain superfamily EP550_13190 IPR018101 Translation elongation factor Ts, conserved site EP550_13190 IPR009060 UBA-like superfamily EP550_13190 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation EP550_13190 IPR036402 Elongation factor Ts, dimerisation domain superfamily EP550_13190 IPR001816 Translation elongation factor EFTs/EF1B EP550_13195 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid EP550_13195 IPR001865 Ribosomal protein S2 EP550_13195 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily EP550_13195 IPR018130 Ribosomal protein S2, conserved site EP550_13200 IPR001714 Peptidase M24, methionine aminopeptidase EP550_13200 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 EP550_13200 IPR036005 Creatinase/aminopeptidase-like EP550_13200 IPR000994 Peptidase M24 EP550_13210 IPR011701 Major facilitator superfamily EP550_13210 IPR036259 MFS transporter superfamily EP550_13210 IPR004737 Nitrate transporter EP550_13210 IPR020846 Major facilitator superfamily domain EP550_13220 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_13220 IPR023753 FAD/NAD(P)-binding domain EP550_13220 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily EP550_13220 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I EP550_13220 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EP550_13220 IPR022962 Soluble pyridine nucleotide transhydrogenase EP550_13225 IPR007197 Radical SAM EP550_13225 IPR003698 Lipoyl synthase EP550_13225 IPR006638 Elp3/MiaB/NifB EP550_13225 IPR013785 Aldolase-type TIM barrel EP550_13230 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_13230 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_13230 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_13230 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_13230 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_13230 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type EP550_13245 IPR000043 Adenosylhomocysteinase-like EP550_13245 IPR042172 Adenosylhomocysteinase-like superfamily EP550_13245 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site EP550_13245 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EP550_13245 IPR036291 NAD(P)-binding domain superfamily EP550_13250 IPR003171 Methylenetetrahydrofolate reductase EP550_13250 IPR004620 5,10-methylenetetrahydrofolate reductase EP550_13250 IPR029041 FAD-linked oxidoreductase-like EP550_13255 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal EP550_13255 IPR006700 Ribosomal RNA small subunit methyltransferase E EP550_13255 IPR015947 PUA-like superfamily EP550_13255 IPR029028 Alpha/beta knot methyltransferases EP550_13260 IPR029787 Nucleotide cyclase EP550_13260 IPR000160 GGDEF domain EP550_13260 IPR001633 EAL domain EP550_13260 IPR005330 MHYT domain EP550_13260 IPR035919 EAL domain superfamily EP550_13265 IPR012188 NAD(P)-dependent malic enzyme EP550_13265 IPR037062 Malic enzyme, N-terminal domain superfamily EP550_13265 IPR012301 Malic enzyme, N-terminal domain EP550_13265 IPR002505 Phosphate acetyl/butaryl transferase EP550_13265 IPR012302 Malic enzyme, NAD-binding EP550_13265 IPR042113 Phosphate acetyltransferase, domain 1 EP550_13265 IPR042112 Phosphate acetyltransferase, domain 2 EP550_13265 IPR015884 Malic enzyme, conserved site EP550_13265 IPR036291 NAD(P)-binding domain superfamily EP550_13270 IPR002646 Poly A polymerase, head domain EP550_13270 IPR003607 HD/PDEase domain EP550_13270 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain EP550_13270 IPR012006 tRNA nucleotidyltransferase, proteobacteria EP550_13275 IPR001940 Peptidase S1C EP550_13275 IPR011782 Peptidase S1C, Do EP550_13275 IPR036034 PDZ superfamily EP550_13275 IPR001478 PDZ domain EP550_13275 IPR009003 Peptidase S1, PA clan EP550_13280 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 EP550_13280 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily EP550_13285 IPR001189 Manganese/iron superoxide dismutase EP550_13285 IPR019833 Manganese/iron superoxide dismutase, binding site EP550_13285 IPR019831 Manganese/iron superoxide dismutase, N-terminal EP550_13285 IPR019832 Manganese/iron superoxide dismutase, C-terminal EP550_13285 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily EP550_13285 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily EP550_13320 IPR039653 Prenyltransferase EP550_13320 IPR006370 4-hydroxybenzoate polyprenyltransferase-like EP550_13320 IPR000537 UbiA prenyltransferase family EP550_13325 IPR007440 Chorismate--pyruvate lyase EP550_13325 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily EP550_13335 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site EP550_13335 IPR000109 Proton-dependent oligopeptide transporter family EP550_13335 IPR036259 MFS transporter superfamily EP550_13335 IPR005279 Dipeptide/tripeptide permease EP550_13335 IPR020846 Major facilitator superfamily domain EP550_13345 IPR013762 Integrase-like, catalytic domain superfamily EP550_13345 IPR011010 DNA breaking-rejoining enzyme, catalytic core EP550_13345 IPR010998 Integrase/recombinase, N-terminal EP550_13345 IPR025166 Integrase, DNA-binding domain EP550_13345 IPR038488 Integrase, DNA-binding domain superfamily EP550_13345 IPR002104 Integrase, catalytic domain EP550_13565 IPR025668 Transposase DDE domain EP550_13730 IPR037171 NagB/RpiA transferase-like EP550_13730 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily EP550_13730 IPR002698 5-formyltetrahydrofolate cyclo-ligase EP550_13740 IPR005594 YadA-like, C-terminal EP550_13740 IPR011049 Serralysin-like metalloprotease, C-terminal EP550_13740 IPR024973 ESPR domain EP550_13740 IPR008640 Head domain of trimeric autotransporter adhesin EP550_13740 IPR008635 Coiled stalk of trimeric autotransporter adhesin EP550_13745 IPR003959 ATPase, AAA-type, core EP550_13745 IPR003111 Lon, substrate-binding domain EP550_13745 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_13745 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP550_13745 IPR003593 AAA+ ATPase domain EP550_13745 IPR027543 Lon protease, bacterial EP550_13745 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_13745 IPR008269 Peptidase S16, Lon proteolytic domain EP550_13745 IPR027065 Lon protease EP550_13745 IPR015947 PUA-like superfamily EP550_13745 IPR008268 Peptidase S16, active site EP550_13745 IPR004815 Lon protease, bacterial/eukaryotic-type EP550_13750 IPR029028 Alpha/beta knot methyltransferases EP550_13750 IPR003742 RNA methyltransferase RlmH EP550_13750 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal EP550_13755 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B EP550_13755 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type EP550_13765 IPR036291 NAD(P)-binding domain superfamily EP550_13765 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal EP550_13765 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase EP550_13765 IPR014362 Glutamate dehydrogenase EP550_13765 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain EP550_13765 IPR033922 NAD(P) binding domain of glutamate dehydrogenase EP550_13765 IPR033524 Leu/Phe/Val dehydrogenases active site EP550_13770 IPR007202 4Fe-4S domain EP550_13770 IPR011005 Dihydropteroate synthase-like EP550_13770 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site EP550_13770 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB EP550_13770 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria EP550_13770 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain EP550_13775 IPR011257 DNA glycosylase EP550_13775 IPR004036 Endonuclease III-like, conserved site-2 EP550_13775 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif EP550_13775 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal EP550_13775 IPR003265 HhH-GPD domain EP550_13775 IPR000445 Helix-hairpin-helix motif EP550_13775 IPR005759 Endonuclease III EP550_13775 IPR004035 Endonuclease III, iron-sulphur binding site EP550_13785 IPR006259 Adenylate kinase subfamily EP550_13785 IPR000850 Adenylate kinase/UMP-CMP kinase EP550_13785 IPR033690 Adenylate kinase, conserved site EP550_13785 IPR007862 Adenylate kinase, active site lid domain EP550_13785 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_13800 IPR017790 Penicillin-binding protein 2 EP550_13800 IPR001460 Penicillin-binding protein, transpeptidase EP550_13800 IPR036138 Penicillin-binding protein, dimerisation domain superfamily EP550_13800 IPR005311 Penicillin-binding protein, dimerisation domain EP550_13800 IPR012338 Beta-lactamase/transpeptidase-like EP550_13805 IPR004398 RNA methyltransferase, RsmD EP550_13805 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_13805 IPR002052 DNA methylase, N-6 adenine-specific, conserved site EP550_13815 IPR004400 Urease accessory protein UreG EP550_13815 IPR003495 CobW/HypB/UreG, nucleotide-binding domain EP550_13815 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_13820 IPR038277 UreF domain superfamily EP550_13820 IPR002639 Urease accessory protein UreF EP550_13825 IPR012406 Urease accessory protein UreE EP550_13825 IPR036118 UreE urease accessory, N-terminal domain superfamily EP550_13825 IPR004029 UreE urease accessory, N-terminal EP550_13825 IPR036675 UreE, C-terminal domain superfamily EP550_13825 IPR007864 Urease accessory protein UreE, C-terminal domain EP550_13830 IPR017950 Urease active site EP550_13830 IPR029754 Urease nickel binding site EP550_13830 IPR017951 Urease alpha subunit, C-terminal EP550_13830 IPR006680 Amidohydrolase-related EP550_13830 IPR005848 Urease, alpha subunit EP550_13830 IPR011612 Urease alpha-subunit, N-terminal domain EP550_13830 IPR032466 Metal-dependent hydrolase EP550_13830 IPR011059 Metal-dependent hydrolase, composite domain superfamily EP550_13835 IPR002019 Urease, beta subunit EP550_13835 IPR036461 Urease, beta subunit superfamily EP550_13840 IPR012010 Urease, gamma subunit EP550_13840 IPR002026 Urease, gamma/gamma-beta subunit EP550_13840 IPR036463 Urease, gamma subunit superfamily EP550_13845 IPR002669 Urease accessory protein UreD EP550_13860 IPR039556 ICL/PEPM domain EP550_13860 IPR006254 Isocitrate lyase EP550_13860 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily EP550_13860 IPR040442 Pyruvate kinase-like domain superfamily EP550_13865 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_13865 IPR005119 LysR, substrate-binding EP550_13865 IPR036390 Winged helix DNA-binding domain superfamily EP550_13865 IPR000847 Transcription regulator HTH, LysR EP550_13870 IPR002550 CNNM, transmembrane domain EP550_13870 IPR036318 FAD-binding, type PCMH-like superfamily EP550_13870 IPR016169 FAD-binding, type PCMH, subdomain 2 EP550_13870 IPR000644 CBS domain EP550_13870 IPR005170 Transporter-associated domain EP550_13880 IPR014738 Citrate transporter EP550_13880 IPR004680 Citrate transporter-like domain EP550_13895 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal EP550_13895 IPR002891 Adenylyl-sulfate kinase EP550_13895 IPR009000 Translation protein, beta-barrel domain superfamily EP550_13895 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain EP550_13895 IPR000795 Transcription factor, GTP-binding domain EP550_13895 IPR005225 Small GTP-binding protein domain EP550_13895 IPR011779 Sulphate adenylyltransferase, large subunit EP550_13895 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_13895 IPR031157 Tr-type G domain, conserved site EP550_13900 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_13900 IPR011784 Sulphate adenylyltransferase, small subunit EP550_13900 IPR002500 Phosphoadenosine phosphosulphate reductase EP550_13910 IPR026950 Capsule assembly protein Wzi EP550_13910 IPR038636 Capsule assembly protein Wzi superfamily EP550_13915 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type EP550_13915 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal EP550_13915 IPR006195 Aminoacyl-tRNA synthetase, class II EP550_13915 IPR002313 Lysine-tRNA ligase, class II EP550_13915 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) EP550_13915 IPR012340 Nucleic acid-binding, OB-fold EP550_13930 IPR024935 Rubredoxin domain EP550_13930 IPR024922 Rubredoxin EP550_13930 IPR024934 Rubredoxin-like domain EP550_13930 IPR018527 Rubredoxin, iron-binding site EP550_13935 IPR023753 FAD/NAD(P)-binding domain EP550_13935 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_13935 IPR041364 Rubredoxin binding domain EP550_13940 IPR000073 Alpha/beta hydrolase fold-1 EP550_13940 IPR011942 Poly(3-hydroxyalkanoate) depolymerase EP550_13940 IPR029058 Alpha/Beta hydrolase fold EP550_13945 IPR036390 Winged helix DNA-binding domain superfamily EP550_13945 IPR005119 LysR, substrate-binding EP550_13945 IPR000847 Transcription regulator HTH, LysR EP550_13945 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_13960 IPR003414 Polyphosphate kinase EP550_13960 IPR024953 Polyphosphate kinase middle domain EP550_13960 IPR036830 Polyphosphate kinase middle domain superfamily EP550_13960 IPR036832 Polyphosphate kinase N-terminal domain superfamily EP550_13960 IPR025198 Polyphosphate kinase N-terminal domain EP550_13960 IPR041108 Polyphosphate kinase, C-terminal domain 1 EP550_13960 IPR025200 Polyphosphate kinase C-terminal domain 2 EP550_13965 IPR023346 Lysozyme-like domain superfamily EP550_13965 IPR036950 Penicillin binding protein transglycosylase domain EP550_13965 IPR011812 Biosynthetic peptidoglycan transglycosylase EP550_13965 IPR001264 Glycosyl transferase, family 51 EP550_13970 IPR035952 Rhomboid-like superfamily EP550_13970 IPR022764 Peptidase S54, rhomboid domain EP550_13975 IPR038766 Membrane component of ABC transporter, predicted EP550_13980 IPR017871 ABC transporter, conserved site EP550_13980 IPR003439 ABC transporter-like EP550_13980 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_13980 IPR003593 AAA+ ATPase domain EP550_13985 IPR013830 SGNH hydrolase-type esterase domain EP550_13985 IPR036514 SGNH hydrolase superfamily EP550_13990 IPR036874 Carbonic anhydrase superfamily EP550_13990 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site EP550_13990 IPR001765 Carbonic anhydrase EP550_13995 IPR029058 Alpha/Beta hydrolase fold EP550_13995 IPR000073 Alpha/beta hydrolase fold-1 EP550_13995 IPR000639 Epoxide hydrolase-like EP550_14005 IPR010917 TonB-dependent receptor, conserved site EP550_14005 IPR010105 TonB-dependent siderophore receptor EP550_14005 IPR012910 TonB-dependent receptor, plug domain EP550_14005 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_14005 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP550_14005 IPR039426 Vitamin B12 transporter BtuB-like EP550_14005 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_14010 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal EP550_14010 IPR000361 FeS cluster biogenesis EP550_14010 IPR017726 Fe/S biogenesis protein NfuA EP550_14010 IPR035903 HesB-like domain superfamily EP550_14010 IPR034904 Fe-S cluster assembly domain superfamily EP550_14020 IPR000917 Sulfatase, N-terminal EP550_14020 IPR024607 Sulfatase, conserved site EP550_14020 IPR017850 Alkaline-phosphatase-like, core domain superfamily EP550_14025 IPR005532 Sulfatase-modifying factor enzyme EP550_14025 IPR042095 Sulfatase-modifying factor enzyme superfamily EP550_14025 IPR016187 C-type lectin fold EP550_14040 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP550_14040 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site EP550_14040 IPR001926 Pyridoxal-phosphate dependent enzyme EP550_14040 IPR011780 D-serine ammonia-lyase EP550_14045 IPR001204 Phosphate transporter EP550_14050 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain EP550_14050 IPR011005 Dihydropteroate synthase-like EP550_14050 IPR036724 Cobalamin-binding domain superfamily EP550_14050 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily EP550_14050 IPR006158 Cobalamin (vitamin B12)-binding domain EP550_14050 IPR000489 Pterin-binding domain EP550_14050 IPR036594 Methionine synthase domain EP550_14050 IPR011822 Cobalamin-dependent methionine synthase EP550_14050 IPR033706 Methionine synthase, B12-binding domain EP550_14050 IPR004223 Vitamin B12-dependent methionine synthase, activation domain EP550_14050 IPR003726 Homocysteine-binding domain EP550_14050 IPR036589 Homocysteine-binding domain superfamily EP550_14055 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II EP550_14055 IPR029061 Thiamin diphosphate-binding fold EP550_14055 IPR033248 Transketolase, C-terminal domain EP550_14055 IPR005475 Transketolase-like, pyrimidine-binding domain EP550_14060 IPR029061 Thiamin diphosphate-binding fold EP550_14060 IPR005474 Transketolase, N-terminal EP550_14065 IPR036259 MFS transporter superfamily EP550_14065 IPR020846 Major facilitator superfamily domain EP550_14065 IPR011701 Major facilitator superfamily EP550_14070 IPR036291 NAD(P)-binding domain superfamily EP550_14070 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_14070 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_14075 IPR005119 LysR, substrate-binding EP550_14075 IPR000847 Transcription regulator HTH, LysR EP550_14075 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_14075 IPR036390 Winged helix DNA-binding domain superfamily EP550_14090 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase EP550_14090 IPR015443 Aldose 1-epimerase EP550_14090 IPR018052 Aldose 1-epimerase, conserved site EP550_14090 IPR014718 Glycoside hydrolase-type carbohydrate-binding EP550_14090 IPR011013 Galactose mutarotase-like domain superfamily EP550_14095 IPR020846 Major facilitator superfamily domain EP550_14095 IPR036259 MFS transporter superfamily EP550_14095 IPR011701 Major facilitator superfamily EP550_14100 IPR020449 Transcription regulator HTH, AraC- type EP550_14100 IPR003313 AraC-type arabinose-binding/dimerisation domain EP550_14100 IPR018062 HTH domain AraC-type, conserved site EP550_14100 IPR018060 DNA binding HTH domain, AraC-type EP550_14100 IPR037923 Transcription regulator HTH-like EP550_14100 IPR009057 Homeobox-like domain superfamily EP550_14105 IPR015868 Glutaminase EP550_14105 IPR002645 STAS domain EP550_14105 IPR012338 Beta-lactamase/transpeptidase-like EP550_14105 IPR036513 STAS domain superfamily EP550_14110 IPR036821 Peptide deformylase superfamily EP550_14110 IPR023635 Peptide deformylase EP550_14115 IPR020846 Major facilitator superfamily domain EP550_14115 IPR036259 MFS transporter superfamily EP550_14115 IPR005829 Sugar transporter, conserved site EP550_14115 IPR011701 Major facilitator superfamily EP550_14125 IPR039368 Acetolactate synthase large subunit, TPP binding domain EP550_14125 IPR029035 DHS-like NAD/FAD-binding domain superfamily EP550_14125 IPR029061 Thiamin diphosphate-binding fold EP550_14125 IPR000399 TPP-binding enzyme, conserved site EP550_14125 IPR012846 Acetolactate synthase, large subunit, biosynthetic EP550_14125 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding EP550_14125 IPR012000 Thiamine pyrophosphate enzyme, central domain EP550_14125 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain EP550_14130 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_14130 IPR011264 Betaine aldehyde dehydrogenase EP550_14130 IPR015590 Aldehyde dehydrogenase domain EP550_14130 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_14130 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP550_14130 IPR016161 Aldehyde/histidinol dehydrogenase EP550_14130 IPR016160 Aldehyde dehydrogenase, cysteine active site EP550_14135 IPR036291 NAD(P)-binding domain superfamily EP550_14135 IPR002811 Aspartate dehydrogenase EP550_14135 IPR020626 L-aspartate dehydrogenase, prokaryotic EP550_14135 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding EP550_14135 IPR011182 L-aspartate dehydrogenase EP550_14140 IPR036291 NAD(P)-binding domain superfamily EP550_14140 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_14140 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_14145 IPR029058 Alpha/Beta hydrolase fold EP550_14145 IPR000073 Alpha/beta hydrolase fold-1 EP550_14155 IPR020846 Major facilitator superfamily domain EP550_14155 IPR000849 Sugar phosphate transporter EP550_14155 IPR011701 Major facilitator superfamily EP550_14155 IPR036259 MFS transporter superfamily EP550_14160 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily EP550_14160 IPR023753 FAD/NAD(P)-binding domain EP550_14160 IPR028202 Reductase, C-terminal EP550_14160 IPR023744 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin--NAD(+) reductase subunit EP550_14160 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_14165 IPR017626 2,3-dihydroxybiphenyl 1,2-dioxygenase EP550_14165 IPR037523 Vicinal oxygen chelate (VOC) domain EP550_14165 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II EP550_14165 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase EP550_14165 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain EP550_14170 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_14170 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_14170 IPR036291 NAD(P)-binding domain superfamily EP550_14175 IPR017941 Rieske [2Fe-2S] iron-sulphur domain EP550_14175 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP550_14185 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP550_14185 IPR017941 Rieske [2Fe-2S] iron-sulphur domain EP550_14190 IPR029016 GAF-like domain superfamily EP550_14190 IPR005471 Transcription regulator IclR, N-terminal EP550_14190 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_14190 IPR036390 Winged helix DNA-binding domain superfamily EP550_14190 IPR014757 Transcription regulator IclR, C-terminal EP550_14205 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site EP550_14205 IPR001753 Enoyl-CoA hydratase/isomerase EP550_14205 IPR014748 Enoyl-CoA hydratase, C-terminal EP550_14205 IPR022852 Carnitinyl-CoA dehydratase EP550_14205 IPR029045 ClpP/crotonase-like domain superfamily EP550_14215 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA EP550_14215 IPR001173 Glycosyltransferase 2-like EP550_14215 IPR029044 Nucleotide-diphospho-sugar transferases EP550_14220 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB EP550_14220 IPR002509 NodB homology domain EP550_14220 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel EP550_14220 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal EP550_14225 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain EP550_14230 IPR038590 YaeQ superfamily EP550_14230 IPR011335 Restriction endonuclease type II-like EP550_14230 IPR009822 YaeQ EP550_14235 IPR018107 Sodium:dicarboxylate symporter, conserved site EP550_14235 IPR036458 Sodium:dicarboxylate symporter superfamily EP550_14235 IPR023954 C4-dicarboxylate transport protein EP550_14235 IPR001991 Sodium:dicarboxylate symporter EP550_14240 IPR003495 CobW/HypB/UreG, nucleotide-binding domain EP550_14240 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_14240 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal EP550_14250 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain EP550_14250 IPR006683 Thioesterase domain EP550_14250 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase EP550_14250 IPR029069 HotDog domain superfamily EP550_14260 IPR000060 BCCT transporter family EP550_14260 IPR018093 BCCT transporter, conserved site EP550_14265 IPR018093 BCCT transporter, conserved site EP550_14265 IPR000060 BCCT transporter family EP550_14270 IPR001647 DNA-binding HTH domain, TetR-type EP550_14270 IPR009057 Homeobox-like domain superfamily EP550_14270 IPR039538 BetI-type transcriptional repressor, C-terminal EP550_14270 IPR017757 Transcriptional repressor BetI EP550_14270 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP550_14275 IPR011264 Betaine aldehyde dehydrogenase EP550_14275 IPR016161 Aldehyde/histidinol dehydrogenase EP550_14275 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_14275 IPR016160 Aldehyde dehydrogenase, cysteine active site EP550_14275 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP550_14275 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_14275 IPR015590 Aldehyde dehydrogenase domain EP550_14280 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_14280 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal EP550_14280 IPR012132 Glucose-methanol-choline oxidoreductase EP550_14280 IPR027424 Glucose Oxidase, domain 2 EP550_14280 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal EP550_14280 IPR011533 Oxygen-dependent choline dehydrogenase EP550_14285 IPR006231 Malate:quinone-oxidoreductase EP550_14285 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_14295 IPR003726 Homocysteine-binding domain EP550_14295 IPR036589 Homocysteine-binding domain superfamily EP550_14295 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT EP550_14300 IPR004754 Amino acid antiporter EP550_14300 IPR002293 Amino acid/polyamine transporter I EP550_14350 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP550_14350 IPR039426 Vitamin B12 transporter BtuB-like EP550_14350 IPR012910 TonB-dependent receptor, plug domain EP550_14350 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_14350 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_14360 IPR007627 RNA polymerase sigma-70 region 2 EP550_14360 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_14360 IPR013324 RNA polymerase sigma factor, region 3/4-like EP550_14360 IPR013325 RNA polymerase sigma factor, region 2 EP550_14360 IPR014284 RNA polymerase sigma-70 like domain EP550_14360 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site EP550_14360 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 EP550_14360 IPR039425 RNA polymerase sigma-70 like EP550_14370 IPR020624 Schiff base-forming aldolase, conserved site EP550_14370 IPR020625 Schiff base-forming aldolase, active site EP550_14370 IPR002220 DapA-like EP550_14370 IPR013785 Aldolase-type TIM barrel EP550_14375 IPR020846 Major facilitator superfamily domain EP550_14375 IPR005829 Sugar transporter, conserved site EP550_14375 IPR036259 MFS transporter superfamily EP550_14375 IPR005828 Major facilitator, sugar transporter-like EP550_14425 IPR029055 Nucleophile aminohydrolases, N-terminal EP550_14425 IPR000101 Gamma-glutamyltranspeptidase EP550_14430 IPR036259 MFS transporter superfamily EP550_14430 IPR011701 Major facilitator superfamily EP550_14430 IPR004638 Drug resistance transporter EmrB-like EP550_14430 IPR020846 Major facilitator superfamily domain EP550_14435 IPR039562 Membrane fusion protein, biotin-lipoyl like domain EP550_14440 IPR029069 HotDog domain superfamily EP550_14440 IPR003736 Phenylacetic acid degradation-related domain EP550_14440 IPR006683 Thioesterase domain EP550_14445 IPR013785 Aldolase-type TIM barrel EP550_14445 IPR030656 Delta-aminolevulinic acid dehydratase, active site EP550_14445 IPR001731 Delta-aminolevulinic acid dehydratase EP550_14450 IPR006076 FAD dependent oxidoreductase EP550_14450 IPR012727 Glycine oxidase ThiO EP550_14450 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_14455 IPR013549 Domain of unknown function DUF1731 EP550_14455 IPR001509 NAD-dependent epimerase/dehydratase EP550_14455 IPR036291 NAD(P)-binding domain superfamily EP550_14455 IPR010099 Epimerase family protein SDR39U1 EP550_14475 IPR026843 Nuclease SbcCD subunit D, C-terminal domain EP550_14475 IPR004593 Nuclease SbcCD subunit D EP550_14475 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain EP550_14475 IPR029052 Metallo-dependent phosphatase-like EP550_14475 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type EP550_14480 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_14485 IPR029066 PLP-binding barrel EP550_14485 IPR001608 Alanine racemase, N-terminal EP550_14485 IPR011078 Pyridoxal phosphate homeostasis protein EP550_14490 IPR001482 Type II/IV secretion system protein EP550_14490 IPR006321 Pilus retraction protein PilT EP550_14490 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_14490 IPR003593 AAA+ ATPase domain EP550_14495 IPR003593 AAA+ ATPase domain EP550_14495 IPR006321 Pilus retraction protein PilT EP550_14495 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_14495 IPR001482 Type II/IV secretion system protein EP550_14500 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_14500 IPR036390 Winged helix DNA-binding domain superfamily EP550_14500 IPR002481 Ferric-uptake regulator EP550_14505 IPR037873 BamE-like EP550_14505 IPR026592 Outer membrane protein assembly factor BamE EP550_14505 IPR007450 Lipoprotein SmpA/OmlA EP550_14510 IPR005346 RnfH protein EP550_14510 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp EP550_14510 IPR037021 RnfH superfamily EP550_14525 IPR016131 Haemerythrin, iron-binding site EP550_14525 IPR012827 Haemerythrin, metal-binding domain EP550_14525 IPR035938 Hemerythrin-like superfamily EP550_14525 IPR012312 Haemerythrin-like EP550_14525 IPR023504 Bacteriohemerythrin-like protein EP550_14530 IPR026869 Putative glutamine amidotransferase type 2 EP550_14530 IPR029055 Nucleophile aminohydrolases, N-terminal EP550_14530 IPR017932 Glutamine amidotransferase type 2 domain EP550_14540 IPR041727 N-Acetyl-L-glutamate kinase, cyclic EP550_14540 IPR001048 Aspartate/glutamate/uridylate kinase EP550_14540 IPR037528 Acetylglutamate kinase ArgB EP550_14540 IPR004662 Acetylglutamate kinase family EP550_14540 IPR036393 Acetylglutamate kinase-like superfamily EP550_14545 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I EP550_14545 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily EP550_14545 IPR005841 Alpha-D-phosphohexomutase superfamily EP550_14545 IPR005843 Alpha-D-phosphohexomutase, C-terminal EP550_14545 IPR016066 Alpha-D-phosphohexomutase, conserved site EP550_14545 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III EP550_14545 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III EP550_14545 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II EP550_14550 IPR029054 dUTPase-like EP550_14550 IPR033704 dUTPase, trimeric EP550_14550 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase EP550_14550 IPR036157 dUTPase-like superfamily EP550_14555 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_14555 IPR005752 ATP-dependent DNA helicase Rep EP550_14555 IPR000212 DNA helicase, UvrD/REP type EP550_14555 IPR014017 UvrD-like DNA helicase, C-terminal EP550_14555 IPR013986 DExx box DNA helicase domain superfamily EP550_14555 IPR014016 UvrD-like helicase, ATP-binding domain EP550_14555 IPR034739 UvrD/AddA helicase, N-terminal EP550_14560 IPR039567 Glycine zipper domain EP550_14560 IPR036737 OmpA-like domain superfamily EP550_14560 IPR006665 OmpA-like domain EP550_14560 IPR006664 Outer membrane protein, bacterial EP550_14560 IPR006690 Outer membrane protein, OmpA-like, conserved site EP550_14565 IPR002123 Phospholipid/glycerol acyltransferase EP550_14575 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily EP550_14575 IPR013033 Septum formation inhibitor MinC EP550_14575 IPR005526 Septum formation inhibitor MinC, C-terminal EP550_14575 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal EP550_14580 IPR025501 ATP binding protein MinD EP550_14580 IPR010223 ATP binding protein MinD, bacterial-type EP550_14580 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain EP550_14580 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_14585 IPR005527 Cell division topological specificity factor MinE EP550_14585 IPR036707 Cell division topological specificity factor MinE superfamily EP550_14600 IPR004778 Homoserine/Threonine efflux protein EP550_14600 IPR001123 Amino acid exporter protein, LeuE-type EP550_14615 IPR024474 Zinc-finger binding domain of transposase IS66 EP550_14615 IPR039552 Transposase IS66, C-terminal EP550_14615 IPR024463 Transposase TnpC, homeodomain EP550_14615 IPR004291 Transposase, IS66 EP550_14620 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_14620 IPR018541 FtsK gamma domain EP550_14620 IPR025199 DNA translocase FtsK, 4TM region EP550_14620 IPR041027 FtsK alpha domain EP550_14620 IPR002543 FtsK domain EP550_14620 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_14620 IPR036390 Winged helix DNA-binding domain superfamily EP550_14625 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_14625 IPR023753 FAD/NAD(P)-binding domain EP550_14625 IPR005982 Thioredoxin reductase EP550_14625 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site EP550_14630 IPR016181 Acyl-CoA N-acyltransferase EP550_14630 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase EP550_14630 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal EP550_14635 IPR007472 N-end rule aminoacyl transferase, C-terminal EP550_14635 IPR030700 N-end rule aminoacyl transferase EP550_14635 IPR017138 Aspartate/glutamate leucyltransferase EP550_14635 IPR016181 Acyl-CoA N-acyltransferase EP550_14635 IPR007471 N-end aminoacyl transferase, N-terminal EP550_14640 IPR000182 GNAT domain EP550_14640 IPR006464 N-acetyltransferase RimI/Ard1 EP550_14640 IPR016181 Acyl-CoA N-acyltransferase EP550_14655 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal EP550_14655 IPR031157 Tr-type G domain, conserved site EP550_14655 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal EP550_14655 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle EP550_14655 IPR009000 Translation protein, beta-barrel domain superfamily EP550_14655 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain EP550_14655 IPR004161 Translation elongation factor EFTu-like, domain 2 EP550_14655 IPR000795 Transcription factor, GTP-binding domain EP550_14655 IPR005225 Small GTP-binding protein domain EP550_14655 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_14655 IPR033720 Elongation factor Tu, domain 2 EP550_14660 IPR041095 Elongation Factor G, domain II EP550_14660 IPR009022 Elongation factor G, domain III EP550_14660 IPR035647 EF-G domain III/V-like EP550_14660 IPR035649 EFG, domain V EP550_14660 IPR000640 Elongation factor EFG, domain V-like EP550_14660 IPR004161 Translation elongation factor EFTu-like, domain 2 EP550_14660 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP550_14660 IPR031157 Tr-type G domain, conserved site EP550_14660 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_14660 IPR005517 Translation elongation factor EFG/EF2, domain IV EP550_14660 IPR004540 Translation elongation factor EFG/EF2 EP550_14660 IPR009000 Translation protein, beta-barrel domain superfamily EP550_14660 IPR000795 Transcription factor, GTP-binding domain EP550_14660 IPR005225 Small GTP-binding protein domain EP550_14660 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_14665 IPR036823 Ribosomal protein S7 domain superfamily EP550_14665 IPR023798 Ribosomal protein S7 domain EP550_14665 IPR000235 Ribosomal protein S5/S7 EP550_14665 IPR005717 Ribosomal protein S7, bacterial/organellar-type EP550_14665 IPR020606 Ribosomal protein S7, conserved site EP550_14670 IPR006032 Ribosomal protein S12/S23 EP550_14670 IPR012340 Nucleic acid-binding, OB-fold EP550_14670 IPR005679 Ribosomal protein S12, bacterial-type EP550_14680 IPR018201 Beta-ketoacyl synthase, active site EP550_14680 IPR016039 Thiolase-like EP550_14680 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain EP550_14680 IPR000794 Beta-ketoacyl synthase EP550_14680 IPR014030 Beta-ketoacyl synthase, N-terminal EP550_14680 IPR014031 Beta-ketoacyl synthase, C-terminal EP550_14690 IPR011051 RmlC-like cupin domain superfamily EP550_14690 IPR012093 Pirin EP550_14690 IPR008778 Pirin, C-terminal domain EP550_14690 IPR003829 Pirin, N-terminal domain EP550_14690 IPR014710 RmlC-like jelly roll fold EP550_14700 IPR014445 Glutamine-dependent NAD(+) synthetase EP550_14700 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_14700 IPR003010 Carbon-nitrogen hydrolase EP550_14700 IPR036526 Carbon-nitrogen hydrolase superfamily EP550_14700 IPR003694 NAD(+) synthetase EP550_14700 IPR022310 NAD/GMP synthase EP550_14700 IPR000132 Nitrilase/cyanide hydratase, conserved site EP550_14715 IPR036010 2Fe-2S ferredoxin-like superfamily EP550_14715 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP550_14715 IPR000951 Phthalate dioxygenase reductase EP550_14715 IPR012675 Beta-grasp domain superfamily EP550_14715 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site EP550_14715 IPR017938 Riboflavin synthase-like beta-barrel EP550_14715 IPR017927 FAD-binding domain, ferredoxin reductase-type EP550_14715 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP550_14715 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP550_14715 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain EP550_14715 IPR039003 Carnitine monooxygenase reductase subunit EP550_14720 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_14720 IPR016161 Aldehyde/histidinol dehydrogenase EP550_14720 IPR010102 Succinate semialdehyde dehydrogenase EP550_14720 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP550_14720 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_14720 IPR016160 Aldehyde dehydrogenase, cysteine active site EP550_14720 IPR015590 Aldehyde dehydrogenase domain EP550_14725 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain EP550_14725 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP550_14725 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit EP550_14725 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site EP550_14725 IPR039004 Carnitine monooxygenase oxygenase subunit EP550_14725 IPR017941 Rieske [2Fe-2S] iron-sulphur domain EP550_14730 IPR029058 Alpha/Beta hydrolase fold EP550_14730 IPR013094 Alpha/beta hydrolase fold-3 EP550_14735 IPR000060 BCCT transporter family EP550_14740 IPR011829 Tartrate dehydrogenase EP550_14740 IPR024084 Isopropylmalate dehydrogenase-like domain EP550_14740 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site EP550_14745 IPR036390 Winged helix DNA-binding domain superfamily EP550_14745 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_14745 IPR005119 LysR, substrate-binding EP550_14745 IPR000847 Transcription regulator HTH, LysR EP550_14765 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site EP550_14765 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain EP550_14770 IPR004821 Cytidyltransferase-like domain EP550_14770 IPR001980 Phosphopantetheine adenylyltransferase EP550_14770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_14775 IPR000037 SsrA-binding protein EP550_14775 IPR020081 SsrA-binding protein, conserved site EP550_14775 IPR023620 Small protein B EP550_14780 IPR008254 Flavodoxin/nitric oxide synthase EP550_14780 IPR005025 NADPH-dependent FMN reductase-like EP550_14780 IPR029039 Flavoprotein-like superfamily EP550_14790 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP550_14790 IPR036986 RNA-binding S4 domain superfamily EP550_14790 IPR002942 RNA-binding S4 domain EP550_14790 IPR006145 Pseudouridine synthase, RsuA/RluA EP550_14790 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site EP550_14790 IPR006225 Pseudouridine synthase, RluC/RluD EP550_14795 IPR011990 Tetratricopeptide-like helical domain superfamily EP550_14795 IPR039565 Outer membrane lipoprotein BamD-like EP550_14795 IPR017689 Outer membrane protein assembly factor BamD EP550_14800 IPR002694 Zinc finger, CHC2-type EP550_14800 IPR006171 TOPRIM domain EP550_14800 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily EP550_14800 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal EP550_14800 IPR013264 DNA primase, catalytic core, N-terminal EP550_14800 IPR036977 DNA Primase, CHC2-type zinc finger EP550_14800 IPR013173 DNA primase DnaG, DnaB-binding domain EP550_14800 IPR019475 DNA primase, DnaB-helicase binding domain EP550_14800 IPR030846 DNA primase DnaG, bacteria EP550_14800 IPR034151 Bacterial DnaG primase, TOPRIM domain EP550_14800 IPR006295 DNA primase, DnaG EP550_14805 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase EP550_14805 IPR036291 NAD(P)-binding domain superfamily EP550_14805 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase EP550_14805 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain EP550_14805 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily EP550_14805 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal EP550_14805 IPR018214 Glutamyl-tRNA reductase, conserved site EP550_14805 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily EP550_14815 IPR004565 Outer membrane lipoprotein LolB EP550_14815 IPR029046 Lipoprotein localisation LolA/LolB/LppX EP550_14820 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_14820 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase EP550_14820 IPR006204 GHMP kinase N-terminal domain EP550_14820 IPR036554 GHMP kinase, C-terminal domain superfamily EP550_14820 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP550_14820 IPR013750 GHMP kinase, C-terminal domain EP550_14835 IPR029057 Phosphoribosyltransferase-like EP550_14835 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site EP550_14835 IPR005946 Ribose-phosphate pyrophosphokinase EP550_14835 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain EP550_14835 IPR000836 Phosphoribosyltransferase domain EP550_14835 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type EP550_14840 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal EP550_14840 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily EP550_14840 IPR029751 Ribosomal protein L25 EP550_14840 IPR020055 Ribosomal protein L25, short-form EP550_14845 IPR001328 Peptidyl-tRNA hydrolase EP550_14845 IPR018171 Peptidyl-tRNA hydrolase, conserved site EP550_14845 IPR036416 Peptidyl-tRNA hydrolase superfamily EP550_14850 IPR009010 Aspartate decarboxylase-like domain superfamily EP550_14850 IPR003190 Aspartate decarboxylase EP550_14865 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB EP550_14865 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily EP550_14875 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase EP550_14875 IPR013785 Aldolase-type TIM barrel EP550_14875 IPR016084 Haem oxygenase-like, multi-helical EP550_14875 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase EP550_14875 IPR029056 Ribokinase-like EP550_14875 IPR036206 Thiamin phosphate synthase superfamily EP550_14875 IPR022998 Thiamine phosphate synthase/TenI EP550_14875 IPR034291 Thiamine phosphate synthase EP550_14875 IPR004305 Thiaminase-2/PQQC EP550_14880 IPR007055 BON domain EP550_14880 IPR014004 Transport-associated and nodulation domain, bacteria EP550_14880 IPR036779 LysM domain superfamily EP550_14880 IPR018392 LysM domain EP550_14885 IPR003231 Acyl carrier protein (ACP) EP550_14885 IPR036736 ACP-like superfamily EP550_14885 IPR006162 Phosphopantetheine attachment site EP550_14885 IPR009081 Phosphopantetheine binding ACP domain EP550_14890 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_14890 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_14890 IPR036291 NAD(P)-binding domain superfamily EP550_14890 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase EP550_14895 IPR024925 Malonyl CoA-acyl carrier protein transacylase EP550_14895 IPR001227 Acyl transferase domain superfamily EP550_14895 IPR014043 Acyl transferase EP550_14895 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase EP550_14895 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type EP550_14895 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding EP550_14900 IPR002677 Ribosomal protein L32p EP550_14900 IPR011332 Zinc-binding ribosomal protein EP550_14905 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria EP550_14905 IPR003772 Large ribosomal RNA subunit accumulation protein YceD EP550_14910 IPR007411 Elongation factor P hydroxylase EP550_14915 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily EP550_14915 IPR006070 YrdC-like domain EP550_14920 IPR003768 Segregation and condensation protein A EP550_14925 IPR005234 Chromosome segregation/condensation protein ScpB EP550_14925 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_14925 IPR036390 Winged helix DNA-binding domain superfamily EP550_14930 IPR036986 RNA-binding S4 domain superfamily EP550_14930 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain EP550_14930 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP550_14930 IPR002942 RNA-binding S4 domain EP550_14930 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site EP550_14930 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F EP550_14930 IPR006145 Pseudouridine synthase, RsuA/RluA EP550_14935 IPR004472 Dethiobiotin synthase BioD EP550_14935 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_14940 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC EP550_14940 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_14945 IPR004839 Aminotransferase, class I/classII EP550_14945 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_14945 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type EP550_14945 IPR015424 Pyridoxal phosphate-dependent transferase EP550_14945 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site EP550_14945 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_14950 IPR015424 Pyridoxal phosphate-dependent transferase EP550_14950 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_14950 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_14950 IPR007197 Radical SAM EP550_14950 IPR006638 Elp3/MiaB/NifB EP550_14950 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB EP550_14950 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA EP550_14950 IPR010722 Biotin and thiamin synthesis-associated domain EP550_14950 IPR005814 Aminotransferase class-III EP550_14950 IPR013785 Aldolase-type TIM barrel EP550_14955 IPR029058 Alpha/Beta hydrolase fold EP550_14955 IPR000073 Alpha/beta hydrolase fold-1 EP550_14955 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_14955 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC EP550_14955 IPR013216 Methyltransferase type 11 EP550_14960 IPR036412 HAD-like superfamily EP550_14960 IPR006379 HAD-superfamily hydrolase, subfamily IIB EP550_14960 IPR023214 HAD superfamily EP550_14960 IPR003337 Trehalose-phosphatase EP550_14965 IPR012766 Alpha,alpha-trehalose-phosphate synthase EP550_14965 IPR001830 Glycosyl transferase, family 20 EP550_14970 IPR020846 Major facilitator superfamily domain EP550_14970 IPR036259 MFS transporter superfamily EP550_14970 IPR011701 Major facilitator superfamily EP550_14975 IPR012347 Ferritin-like EP550_14975 IPR002024 Bacterioferritin EP550_14975 IPR008331 Ferritin/DPS protein domain EP550_14975 IPR009078 Ferritin-like superfamily EP550_14975 IPR009040 Ferritin-like diiron domain EP550_14980 IPR012340 Nucleic acid-binding, OB-fold EP550_14980 IPR004150 NAD-dependent DNA ligase, OB-fold EP550_14980 IPR001357 BRCT domain EP550_14980 IPR001679 NAD-dependent DNA ligase EP550_14980 IPR041663 DisA/LigA, helix-hairpin-helix motif EP550_14980 IPR013839 NAD-dependent DNA ligase, adenylation EP550_14980 IPR013840 NAD-dependent DNA ligase, N-terminal EP550_14980 IPR036420 BRCT domain superfamily EP550_14980 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type EP550_14980 IPR033136 NAD-dependent DNA ligase, conserved site EP550_14980 IPR010994 RuvA domain 2-like EP550_14980 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 EP550_14980 IPR018239 NAD-dependent DNA ligase, active site EP550_14990 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_14990 IPR003395 RecF/RecN/SMC, N-terminal EP550_14990 IPR010935 SMCs flexible hinge EP550_14990 IPR011890 Structural maintenance of chromosomes protein, prokaryotic EP550_14990 IPR036277 SMCs flexible hinge superfamily EP550_14990 IPR024704 Structural maintenance of chromosomes protein EP550_15000 IPR002781 Transmembrane protein TauE-like EP550_15010 IPR004619 Type III pantothenate kinase EP550_15015 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_15015 IPR004780 Signal recognition particle protein EP550_15015 IPR003593 AAA+ ATPase domain EP550_15015 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily EP550_15015 IPR013822 Signal recognition particle SRP54, helical bundle EP550_15015 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain EP550_15015 IPR004125 Signal recognition particle, SRP54 subunit, M-domain EP550_15015 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily EP550_15015 IPR022941 Signal recognition particle, SRP54 subunit EP550_15025 IPR035587 DUS-like, FMN-binding domain EP550_15025 IPR018517 tRNA-dihydrouridine synthase, conserved site EP550_15025 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal EP550_15025 IPR013785 Aldolase-type TIM barrel EP550_15025 IPR001269 tRNA-dihydrouridine synthase EP550_15025 IPR032886 tRNA-dihydrouridine(16) synthase EP550_15060 IPR033704 dUTPase, trimeric EP550_15060 IPR036157 dUTPase-like superfamily EP550_15060 IPR029054 dUTPase-like EP550_15060 IPR011962 dCTP deaminase EP550_15075 IPR010049 MTA/SAH nucleosidase EP550_15075 IPR000845 Nucleoside phosphorylase domain EP550_15075 IPR035994 Nucleoside phosphorylase superfamily EP550_15085 IPR034904 Fe-S cluster assembly domain superfamily EP550_15085 IPR000808 Mrp, conserved site EP550_15085 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_15085 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 EP550_15085 IPR019591 Mrp/NBP35 ATP-binding protein EP550_15095 IPR015413 Methionyl/Leucyl tRNA synthetase EP550_15095 IPR023458 Methionine-tRNA ligase, type 1 EP550_15095 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_15095 IPR014758 Methionyl-tRNA synthetase EP550_15095 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal EP550_15095 IPR033911 Methioninyl-tRNA synthetase core domain EP550_15095 IPR029038 Methionyl-tRNA synthetase, Zn-domain EP550_15095 IPR012340 Nucleic acid-binding, OB-fold EP550_15095 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain EP550_15095 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site EP550_15095 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding EP550_15095 IPR002547 tRNA-binding domain EP550_15120 IPR039562 Membrane fusion protein, biotin-lipoyl like domain EP550_15125 IPR005966 D-cysteine desulfhydrase EP550_15125 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase EP550_15125 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP550_15125 IPR001926 Pyridoxal-phosphate dependent enzyme EP550_15130 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_15130 IPR023166 HI0933-like insert domain superfamily EP550_15130 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like EP550_15140 IPR008910 Conserved TM helix EP550_15155 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase EP550_15155 IPR017938 Riboflavin synthase-like beta-barrel EP550_15155 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP550_15155 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP550_15155 IPR033892 Ferredoxin--NADP reductase, bacteria EP550_15155 IPR017927 FAD-binding domain, ferredoxin reductase-type EP550_15155 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain EP550_15160 IPR005119 LysR, substrate-binding EP550_15160 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_15160 IPR036390 Winged helix DNA-binding domain superfamily EP550_15160 IPR000847 Transcription regulator HTH, LysR EP550_15165 IPR012156 Cold shock, CspA EP550_15165 IPR002059 Cold-shock protein, DNA-binding EP550_15165 IPR012340 Nucleic acid-binding, OB-fold EP550_15165 IPR019844 Cold-shock (CSD) domain EP550_15165 IPR011129 Cold shock domain EP550_15170 IPR000836 Phosphoribosyltransferase domain EP550_15170 IPR029057 Phosphoribosyltransferase-like EP550_15170 IPR034332 Uracil phosphoribosyltransferase, bacterial-type EP550_15170 IPR005765 Uracil phosphoribosyl transferase EP550_15175 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 EP550_15175 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit EP550_15180 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit EP550_15180 IPR003918 NADH:ubiquinone oxidoreductase EP550_15180 IPR010227 NADH-quinone oxidoreductase, chain M/4 EP550_15185 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 EP550_15185 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup EP550_15185 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit EP550_15185 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal EP550_15190 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like EP550_15190 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K EP550_15195 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 EP550_15195 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ EP550_15200 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site EP550_15200 IPR010226 NADH-quinone oxidoreductase, chain I EP550_15200 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain EP550_15205 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H EP550_15205 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site EP550_15210 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain EP550_15210 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding EP550_15210 IPR010228 NADH:ubiquinone oxidoreductase, subunit G EP550_15210 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site EP550_15210 IPR036010 2Fe-2S ferredoxin-like superfamily EP550_15210 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain EP550_15210 IPR006656 Molybdopterin oxidoreductase EP550_15210 IPR009010 Aspartate decarboxylase-like domain superfamily EP550_15215 IPR011537 NADH ubiquinone oxidoreductase, F subunit EP550_15215 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site EP550_15215 IPR019554 Soluble ligand binding domain EP550_15215 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain EP550_15215 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily EP550_15215 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain EP550_15215 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily EP550_15220 IPR036249 Thioredoxin-like superfamily EP550_15220 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal EP550_15220 IPR042128 NuoE domain EP550_15220 IPR002023 NADH-quinone oxidoreductase subunit E-like EP550_15225 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H EP550_15225 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site EP550_15225 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site EP550_15225 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit EP550_15225 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily EP550_15225 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily EP550_15225 IPR001135 NADH-quinone oxidoreductase, subunit D EP550_15225 IPR023062 NADH dehydrogenase, subunit CD EP550_15225 IPR010218 NADH dehydrogenase, subunit C EP550_15225 IPR029014 [NiFe]-hydrogenase, large subunit EP550_15230 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit EP550_15230 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit EP550_15235 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily EP550_15235 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 EP550_15235 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid EP550_15240 IPR029787 Nucleotide cyclase EP550_15240 IPR000160 GGDEF domain EP550_15240 IPR033416 Periplasmic sensor domain CHASE7 EP550_15250 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_15250 IPR005467 Histidine kinase domain EP550_15250 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP550_15250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP550_15250 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP550_15250 IPR003660 HAMP domain EP550_15250 IPR003594 Histidine kinase/HSP90-like ATPase EP550_15255 IPR039420 Transcriptional regulatory protein WalR-like EP550_15255 IPR001789 Signal transduction response regulator, receiver domain EP550_15255 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_15255 IPR016032 Signal transduction response regulator, C-terminal effector EP550_15255 IPR011006 CheY-like superfamily EP550_15255 IPR001867 OmpR/PhoB-type DNA-binding domain EP550_15265 IPR000788 Ribonucleotide reductase large subunit, C-terminal EP550_15265 IPR039718 Ribonucleoside-diphosphate reductase large subunit EP550_15265 IPR013346 Ribonucleotide reductase, class I , alpha subunit EP550_15265 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal EP550_15265 IPR005144 ATP-cone domain EP550_15265 IPR013509 Ribonucleotide reductase large subunit, N-terminal EP550_15275 IPR000358 Ribonucleotide reductase small subunit family EP550_15275 IPR033909 Ribonucleotide reductase small subunit EP550_15275 IPR012348 Ribonucleotide reductase-like EP550_15275 IPR009078 Ferritin-like superfamily EP550_15285 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_15285 IPR003594 Histidine kinase/HSP90-like ATPase EP550_15285 IPR025919 Stimulus-sensing domain EP550_15285 IPR025908 Sensor N-terminal transmembrane domain EP550_15285 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP550_15285 IPR005467 Histidine kinase domain EP550_15285 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP550_15285 IPR003660 HAMP domain EP550_15285 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP550_15355 IPR017511 PQQ-dependent membrane bound dehydrogenase EP550_15355 IPR001479 Quinoprotein dehydrogenase, conserved site EP550_15355 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily EP550_15355 IPR002372 Pyrrolo-quinoline quinone repeat EP550_15355 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat EP550_15375 IPR025668 Transposase DDE domain EP550_15385 IPR003719 Phenazine biosynthesis PhzF protein EP550_15400 IPR036397 Ribonuclease H superfamily EP550_15400 IPR012337 Ribonuclease H-like superfamily EP550_15400 IPR001598 Transposase, IS30, conserved site EP550_15400 IPR025246 Transposase IS30-like HTH domain EP550_15400 IPR001584 Integrase, catalytic core EP550_15420 IPR012349 FMN-binding split barrel EP550_15420 IPR019917 FMN reductase (NADH) RutF EP550_15420 IPR002563 Flavin reductase like domain EP550_15425 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal EP550_15425 IPR038071 UROD/MetE-like superfamily EP550_15425 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal EP550_15425 IPR006276 Cobalamin-independent methionine synthase EP550_15435 IPR005119 LysR, substrate-binding EP550_15435 IPR000847 Transcription regulator HTH, LysR EP550_15435 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_15435 IPR036390 Winged helix DNA-binding domain superfamily EP550_15440 IPR001123 Amino acid exporter protein, LeuE-type EP550_15450 IPR009057 Homeobox-like domain superfamily EP550_15450 IPR018060 DNA binding HTH domain, AraC-type EP550_15450 IPR020449 Transcription regulator HTH, AraC- type EP550_15450 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal EP550_15455 IPR017439 Amidohydrolase EP550_15455 IPR023905 Acetyldiaminopimelate deacetylase EP550_15455 IPR036264 Bacterial exopeptidase dimerisation domain EP550_15455 IPR002933 Peptidase M20 EP550_15455 IPR011650 Peptidase M20, dimerisation domain EP550_15465 IPR000847 Transcription regulator HTH, LysR EP550_15465 IPR005119 LysR, substrate-binding EP550_15465 IPR036390 Winged helix DNA-binding domain superfamily EP550_15465 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_15475 IPR011701 Major facilitator superfamily EP550_15475 IPR020846 Major facilitator superfamily domain EP550_15475 IPR036259 MFS transporter superfamily EP550_15475 IPR005829 Sugar transporter, conserved site EP550_15475 IPR004736 MFS transporter, metabolite:H symporter EP550_15485 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_15485 IPR036390 Winged helix DNA-binding domain superfamily EP550_15485 IPR000847 Transcription regulator HTH, LysR EP550_15485 IPR005119 LysR, substrate-binding EP550_15490 IPR012286 Tetrahaem cytochrome domain EP550_15490 IPR010960 Flavocytochrome c EP550_15490 IPR036280 Multiheme cytochrome superfamily EP550_15490 IPR011031 Multihaem cytochrome EP550_15490 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_15490 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily EP550_15490 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain EP550_15495 IPR012830 Citrate utilization protein B EP550_15495 IPR036197 NarG-like superfamily EP550_15500 IPR023606 CoA-transferase family III domain superfamily EP550_15500 IPR003673 CoA-transferase family III EP550_15505 IPR036259 MFS transporter superfamily EP550_15505 IPR020846 Major facilitator superfamily domain EP550_15505 IPR011701 Major facilitator superfamily EP550_15505 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family EP550_15505 IPR005829 Sugar transporter, conserved site EP550_15510 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_15510 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_15510 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_15510 IPR006089 Acyl-CoA dehydrogenase, conserved site EP550_15510 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_15510 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_15510 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_15515 IPR005119 LysR, substrate-binding EP550_15515 IPR036390 Winged helix DNA-binding domain superfamily EP550_15515 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_15515 IPR000847 Transcription regulator HTH, LysR EP550_15520 IPR011032 GroES-like superfamily EP550_15520 IPR013154 Alcohol dehydrogenase, N-terminal EP550_15520 IPR013149 Alcohol dehydrogenase, C-terminal EP550_15520 IPR020843 Polyketide synthase, enoylreductase domain EP550_15520 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site EP550_15520 IPR036291 NAD(P)-binding domain superfamily EP550_15525 IPR006330 Adenosine/adenine deaminase EP550_15525 IPR028893 Adenosine deaminase EP550_15525 IPR001365 Adenosine/AMP deaminase domain EP550_15525 IPR006650 Adenosine/AMP deaminase active site EP550_15525 IPR032466 Metal-dependent hydrolase EP550_15550 IPR036094 Quinolinate synthetase A superfamily EP550_15550 IPR003473 Quinolinate synthetase A EP550_15550 IPR023513 Quinolinate synthase A, type 1 EP550_15555 IPR002813 Arginine biosynthesis protein ArgJ EP550_15555 IPR042195 ArgJ beta chain, C-terminal domain EP550_15555 IPR016117 ArgJ-like domain superfamily EP550_15560 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain EP550_15560 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_15560 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily EP550_15560 IPR023546 Methylated-DNA--protein-cysteine methyltransferase EP550_15560 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding EP550_15560 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain EP550_15560 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site EP550_15565 IPR000390 Small multidrug resistance protein family EP550_15575 IPR007939 Copper resistance B precursor EP550_15580 IPR033138 Multicopper oxidases, conserved site EP550_15580 IPR034279 Copper resistance protein, third cupredoxin domain EP550_15580 IPR034284 Copper resistance protein, first cupredoxin domain EP550_15580 IPR034282 Copper resistance protein CopA, second cupredoxin domain EP550_15580 IPR006311 Twin-arginine translocation pathway, signal sequence EP550_15580 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal EP550_15580 IPR008972 Cupredoxin EP550_15580 IPR006376 Copper-resistance protein CopA EP550_15580 IPR002355 Multicopper oxidase, copper-binding site EP550_15580 IPR011707 Multicopper oxidase, type 3 EP550_15580 IPR001117 Multicopper oxidase, type 1 EP550_15580 IPR011706 Multicopper oxidase, type 2 EP550_15590 IPR036412 HAD-like superfamily EP550_15590 IPR006379 HAD-superfamily hydrolase, subfamily IIB EP550_15590 IPR023214 HAD superfamily EP550_15590 IPR000150 Cof family EP550_15595 IPR013785 Aldolase-type TIM barrel EP550_15595 IPR011060 Ribulose-phosphate binding barrel EP550_15595 IPR026019 Ribulose-phosphate 3-epimerase EP550_15595 IPR000056 Ribulose-phosphate 3-epimerase-like EP550_15605 IPR029058 Alpha/Beta hydrolase fold EP550_15605 IPR014186 S-formylglutathione hydrolase EP550_15605 IPR000801 Putative esterase EP550_15615 IPR007536 Ribosomal RNA small subunit methyltransferase J EP550_15615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_15620 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB EP550_15620 IPR000905 Gcp-like domain EP550_15625 IPR011004 Trimeric LpxA-like superfamily EP550_15625 IPR001451 Hexapeptide repeat EP550_15630 IPR015797 NUDIX hydrolase-like domain superfamily EP550_15630 IPR000059 NUDIX hydrolase, NudL, conserved site EP550_15630 IPR000086 NUDIX hydrolase domain EP550_15630 IPR023735 Uncharacterised nudix hydrolase NudL EP550_15665 IPR024463 Transposase TnpC, homeodomain EP550_15665 IPR004291 Transposase, IS66 EP550_15665 IPR024474 Zinc-finger binding domain of transposase IS66 EP550_15665 IPR039552 Transposase IS66, C-terminal EP550_15685 IPR019999 Anthranilate synthase component I-like EP550_15685 IPR015890 Chorismate-utilising enzyme, C-terminal EP550_15685 IPR005801 ADC synthase EP550_15685 IPR005802 Aminodeoxychorismate synthase, component I EP550_15685 IPR006805 Anthranilate synthase component I, N-terminal EP550_15690 IPR015424 Pyridoxal phosphate-dependent transferase EP550_15690 IPR005861 Histidinol-phosphate aminotransferase family EP550_15690 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_15690 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_15690 IPR004839 Aminotransferase, class I/classII EP550_15695 IPR016161 Aldehyde/histidinol dehydrogenase EP550_15695 IPR001692 Histidinol dehydrogenase, conserved site EP550_15695 IPR022695 Histidinol dehydrogenase, monofunctional EP550_15695 IPR012131 Histidinol dehydrogenase EP550_15700 IPR013820 ATP phosphoribosyltransferase, catalytic domain EP550_15700 IPR018198 ATP phosphoribosyltransferase, conserved site EP550_15700 IPR024893 ATP phosphoribosyltransferase HisG, short form EP550_15700 IPR001348 ATP phosphoribosyltransferase HisG EP550_15705 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase EP550_15705 IPR002110 Ankyrin repeat EP550_15705 IPR001986 Enolpyruvate transferase domain EP550_15705 IPR020683 Ankyrin repeat-containing domain EP550_15705 IPR036968 Enolpyruvate transferase domain superfamily EP550_15705 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta EP550_15710 IPR002634 BolA protein EP550_15710 IPR036065 BolA-like superfamily EP550_15715 IPR003489 Ribosome hibernation promoting factor/RaiA EP550_15715 IPR036567 Ribosome hibernation promotion factor-like EP550_15720 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily EP550_15720 IPR007634 RNA polymerase sigma factor 54, DNA-binding EP550_15720 IPR007046 RNA polymerase sigma factor 54, core-binding domain EP550_15720 IPR000394 RNA polymerase sigma factor 54 EP550_15765 IPR001110 Uncharacterised protein family UPF0012, conserved site EP550_15765 IPR036526 Carbon-nitrogen hydrolase superfamily EP550_15765 IPR003010 Carbon-nitrogen hydrolase EP550_15775 IPR036390 Winged helix DNA-binding domain superfamily EP550_15775 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_15775 IPR000835 MarR-type HTH domain EP550_15780 IPR015946 K homology domain-like, alpha/beta EP550_15780 IPR019953 Organic hydroperoxide resistance protein famiy EP550_15780 IPR003718 OsmC/Ohr family EP550_15780 IPR036102 OsmC/Ohr superfamily EP550_15785 IPR001482 Type II/IV secretion system protein EP550_15785 IPR013369 Type II secretion system GspE EP550_15785 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_15785 IPR037257 General secretory system II, protein E, N-terminal superfamily EP550_15785 IPR042181 Type II secretion system, protein E, N-terminal EP550_15805 IPR002421 5'-3' exonuclease, N-terminal EP550_15805 IPR002298 DNA polymerase A EP550_15805 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal EP550_15805 IPR002562 3'-5' exonuclease domain EP550_15805 IPR019760 DNA-directed DNA polymerase, family A, conserved site EP550_15805 IPR001098 DNA-directed DNA polymerase, family A, palm domain EP550_15805 IPR020045 DNA polymerase I-like, H3TH domain EP550_15805 IPR018320 DNA polymerase 1 EP550_15805 IPR008918 Helix-hairpin-helix motif, class 2 EP550_15805 IPR029060 PIN-like domain superfamily EP550_15805 IPR012337 Ribonuclease H-like superfamily EP550_15805 IPR036397 Ribonuclease H superfamily EP550_15805 IPR036279 5'-3' exonuclease, C-terminal domain superfamily EP550_15810 IPR003425 CCB3/YggT EP550_15815 IPR036291 NAD(P)-binding domain superfamily EP550_15815 IPR000304 Pyrroline-5-carboxylate reductase EP550_15815 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain EP550_15815 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP550_15815 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal EP550_15820 IPR012094 tRNA(Ile)-lysidine synthase EP550_15820 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal EP550_15820 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain EP550_15820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_15820 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal EP550_15820 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal EP550_15825 IPR029045 ClpP/crotonase-like domain superfamily EP550_15825 IPR001095 Acetyl-CoA carboxylase, alpha subunit EP550_15825 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal EP550_15830 IPR003695 Ppx/GppA phosphatase EP550_15830 IPR022371 Exopolyphosphatase EP550_15830 IPR030673 Pyrophosphatase, GppA/Ppx-type EP550_15835 IPR013766 Thioredoxin domain EP550_15835 IPR005746 Thioredoxin EP550_15835 IPR017937 Thioredoxin, conserved site EP550_15835 IPR036249 Thioredoxin-like superfamily EP550_15840 IPR003593 AAA+ ATPase domain EP550_15840 IPR004665 Transcription termination factor Rho EP550_15840 IPR011113 Rho termination factor, RNA-binding domain EP550_15840 IPR036269 Rho termination factor, N-terminal domain superfamily EP550_15840 IPR011112 Rho termination factor, N-terminal EP550_15840 IPR041703 Transcription termination factor Rho, ATP binding domain EP550_15840 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_15840 IPR012340 Nucleic acid-binding, OB-fold EP550_15840 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain EP550_15840 IPR011129 Cold shock domain EP550_15855 IPR000119 Histone-like DNA-binding protein EP550_15855 IPR020816 Histone-like DNA-binding protein, conserved site EP550_15855 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily EP550_15855 IPR005684 Integration host factor, alpha subunit EP550_15860 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain EP550_15860 IPR002547 tRNA-binding domain EP550_15860 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 EP550_15860 IPR005147 tRNA synthetase, B5-domain EP550_15860 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit EP550_15860 IPR012340 Nucleic acid-binding, OB-fold EP550_15860 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily EP550_15860 IPR005121 Ferrodoxin-fold anticodon-binding domain EP550_15860 IPR009061 Putative DNA-binding domain superfamily EP550_15860 IPR005146 B3/B4 tRNA-binding domain EP550_15860 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain EP550_15865 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm EP550_15865 IPR002319 Phenylalanyl-tRNA synthetase EP550_15865 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial EP550_15865 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal EP550_15865 IPR006195 Aminoacyl-tRNA synthetase, class II EP550_15865 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit EP550_15885 IPR005813 Ribosomal protein L20 EP550_15885 IPR035566 Ribosomal protein L20, C-terminal EP550_15890 IPR037229 Ribosomal protein L35 superfamily EP550_15890 IPR021137 Ribosomal protein L35 EP550_15890 IPR001706 Ribosomal protein L35, non-mitochondrial EP550_15890 IPR018265 Ribosomal protein L35, conserved site EP550_15895 IPR020846 Major facilitator superfamily domain EP550_15895 IPR011701 Major facilitator superfamily EP550_15895 IPR004751 Drug antiporter protein EP550_15895 IPR036259 MFS transporter superfamily EP550_15900 IPR032816 SNARE associated Golgi protein EP550_15905 IPR010987 Glutathione S-transferase, C-terminal-like EP550_15905 IPR036282 Glutathione S-transferase, C-terminal domain superfamily EP550_15905 IPR036249 Thioredoxin-like superfamily EP550_15905 IPR004046 Glutathione S-transferase, C-terminal EP550_15905 IPR004045 Glutathione S-transferase, N-terminal EP550_15915 IPR019814 Translation initiation factor 3, N-terminal EP550_15915 IPR001288 Translation initiation factor 3 EP550_15915 IPR019815 Translation initiation factor 3, C-terminal EP550_15915 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily EP550_15915 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily EP550_15920 IPR012947 Threonyl/alanyl tRNA synthetase, SAD EP550_15920 IPR012676 TGS-like EP550_15920 IPR004154 Anticodon-binding EP550_15920 IPR006195 Aminoacyl-tRNA synthetase, class II EP550_15920 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) EP550_15920 IPR004095 TGS EP550_15920 IPR036621 Anticodon-binding domain superfamily EP550_15920 IPR002320 Threonine-tRNA ligase, class IIa EP550_15920 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily EP550_15920 IPR033728 Threonine-tRNA ligase catalytic core domain EP550_15920 IPR012675 Beta-grasp domain superfamily EP550_15925 IPR042099 AMP-dependent synthetase-like superfamily EP550_15925 IPR000873 AMP-dependent synthetase/ligase EP550_15925 IPR025110 AMP-binding enzyme, C-terminal domain EP550_15925 IPR020845 AMP-binding, conserved site EP550_15930 IPR006839 Ribosome-associated, YjgA EP550_15930 IPR023153 PSPTO4464-like domain superfamily EP550_15935 IPR035895 HPr-like superfamily EP550_15935 IPR000032 Phosphocarrier protein HPr-like EP550_15935 IPR002114 Phosphotransferase system, HPr serine phosphorylation site EP550_15935 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site EP550_15940 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_15940 IPR005337 RapZ-like family EP550_15945 IPR003721 Pantoate-beta-alanine ligase EP550_15945 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain EP550_15945 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_15945 IPR004821 Cytidyltransferase-like domain EP550_15950 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily EP550_15950 IPR003700 Ketopantoate hydroxymethyltransferase EP550_15950 IPR040442 Pyruvate kinase-like domain superfamily EP550_15955 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK EP550_15955 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily EP550_15960 IPR002646 Poly A polymerase, head domain EP550_15960 IPR025866 Polymerase A arginine-rich C-terminal domain EP550_15960 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain EP550_15960 IPR010206 Poly(A) polymerase I EP550_15965 IPR004509 Competence protein ComEA, helix-hairpin-helix domain EP550_15965 IPR010994 RuvA domain 2-like EP550_15970 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core EP550_15970 IPR011551 NTP pyrophosphohydrolase MazG EP550_15975 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_15975 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_15975 IPR036291 NAD(P)-binding domain superfamily EP550_15980 IPR002912 ACT domain EP550_15980 IPR012675 Beta-grasp domain superfamily EP550_15980 IPR003607 HD/PDEase domain EP550_15980 IPR004811 RelA/SpoT family EP550_15980 IPR007685 RelA/SpoT EP550_15980 IPR004095 TGS EP550_15980 IPR012676 TGS-like EP550_15980 IPR033655 RelA, TGS domain EP550_15985 IPR002792 TRAM domain EP550_15985 IPR010280 (Uracil-5)-methyltransferase family EP550_15985 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_15985 IPR012340 Nucleic acid-binding, OB-fold EP550_15985 IPR030390 RNA methyltransferase TrmA, active site EP550_15985 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD EP550_15995 IPR005858 Cysteine synthase CysM EP550_15995 IPR005856 Cysteine synthase EP550_15995 IPR001926 Pyridoxal-phosphate dependent enzyme EP550_15995 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP550_15995 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site EP550_16000 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain EP550_16000 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP550_16000 IPR005467 Histidine kinase domain EP550_16000 IPR019247 Histidine kinase BarA, N-terminal EP550_16000 IPR001789 Signal transduction response regulator, receiver domain EP550_16000 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP550_16000 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_16000 IPR003660 HAMP domain EP550_16000 IPR011006 CheY-like superfamily EP550_16000 IPR036641 HPT domain superfamily EP550_16000 IPR003594 Histidine kinase/HSP90-like ATPase EP550_16000 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP550_16005 IPR001753 Enoyl-CoA hydratase/isomerase EP550_16005 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site EP550_16005 IPR029045 ClpP/crotonase-like domain superfamily EP550_16010 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site EP550_16010 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain EP550_16010 IPR036291 NAD(P)-binding domain superfamily EP550_16010 IPR015815 3-hydroxyisobutyrate dehydrogenase-related EP550_16010 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding EP550_16010 IPR013328 6-phosphogluconate dehydrogenase, domain 2 EP550_16010 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP550_16015 IPR013022 Xylose isomerase-like, TIM barrel domain EP550_16015 IPR026040 Hydroxypyruvate isomerase-like EP550_16015 IPR036237 Xylose isomerase-like superfamily EP550_16020 IPR004394 Protein Iojap/ribosomal silencing factor RsfS EP550_16025 IPR036291 NAD(P)-binding domain superfamily EP550_16025 IPR005979 Light-dependent protochlorophyllide reductase EP550_16025 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_16030 IPR012136 NADP transhydrogenase, beta subunit EP550_16030 IPR034300 NADP transhydrogenase beta-like domain EP550_16030 IPR029035 DHS-like NAD/FAD-binding domain superfamily EP550_16035 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal EP550_16040 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain EP550_16040 IPR036291 NAD(P)-binding domain superfamily EP550_16040 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 EP550_16040 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 EP550_16040 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal EP550_16065 IPR011701 Major facilitator superfamily EP550_16065 IPR036259 MFS transporter superfamily EP550_16065 IPR020846 Major facilitator superfamily domain EP550_16070 IPR004653 tRNA-dihydrouridine(20/20a) synthase EP550_16070 IPR035587 DUS-like, FMN-binding domain EP550_16070 IPR013785 Aldolase-type TIM barrel EP550_16070 IPR018517 tRNA-dihydrouridine synthase, conserved site EP550_16070 IPR001269 tRNA-dihydrouridine synthase EP550_16080 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain EP550_16080 IPR005119 LysR, substrate-binding EP550_16080 IPR000847 Transcription regulator HTH, LysR EP550_16080 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_16080 IPR036390 Winged helix DNA-binding domain superfamily EP550_16090 IPR000594 THIF-type NAD/FAD binding fold EP550_16090 IPR035985 Ubiquitin-activating enzyme EP550_16100 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel EP550_16100 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain EP550_16100 IPR018136 Aconitase family, 4Fe-4S cluster binding site EP550_16100 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain EP550_16100 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 EP550_16100 IPR036008 Aconitase, iron-sulfur domain EP550_16100 IPR006249 Aconitase/Iron-responsive element-binding protein 2 EP550_16105 IPR018228 Deoxyribonuclease, TatD-related, conserved site EP550_16105 IPR001130 TatD family EP550_16105 IPR032466 Metal-dependent hydrolase EP550_16105 IPR015991 Uncharacterised hydrolase TatD-type EP550_16120 IPR041732 Peptide chain release factor 3, GTP-binding domain EP550_16120 IPR000795 Transcription factor, GTP-binding domain EP550_16120 IPR032090 Peptide chain release factor 3, C-terminal EP550_16120 IPR004548 Peptide chain release factor 3 EP550_16120 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_16120 IPR031157 Tr-type G domain, conserved site EP550_16120 IPR004161 Translation elongation factor EFTu-like, domain 2 EP550_16120 IPR035647 EF-G domain III/V-like EP550_16120 IPR009000 Translation protein, beta-barrel domain superfamily EP550_16120 IPR005225 Small GTP-binding protein domain EP550_16120 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily EP550_16145 IPR001633 EAL domain EP550_16145 IPR029787 Nucleotide cyclase EP550_16145 IPR005330 MHYT domain EP550_16145 IPR000160 GGDEF domain EP550_16145 IPR035919 EAL domain superfamily EP550_16150 IPR013116 Ketol-acid reductoisomerase, N-terminal EP550_16150 IPR014359 Ketol-acid reductoisomerase, prokaryotic EP550_16150 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP550_16150 IPR036291 NAD(P)-binding domain superfamily EP550_16150 IPR013023 Ketol-acid reductoisomerase EP550_16150 IPR000506 Ketol-acid reductoisomerase, C-terminal EP550_16155 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal EP550_16155 IPR004789 Acetolactate synthase, small subunit EP550_16155 IPR019455 Acetolactate synthase, small subunit, C-terminal EP550_16155 IPR002912 ACT domain EP550_16155 IPR039557 AHAS, ACT domain EP550_16160 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding EP550_16160 IPR012846 Acetolactate synthase, large subunit, biosynthetic EP550_16160 IPR000399 TPP-binding enzyme, conserved site EP550_16160 IPR029035 DHS-like NAD/FAD-binding domain superfamily EP550_16160 IPR029061 Thiamin diphosphate-binding fold EP550_16160 IPR012000 Thiamine pyrophosphate enzyme, central domain EP550_16160 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain EP550_16160 IPR039368 Acetolactate synthase large subunit, TPP binding domain EP550_16170 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding EP550_16170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_16170 IPR015413 Methionyl/Leucyl tRNA synthetase EP550_16170 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding EP550_16170 IPR025709 Leucyl-tRNA synthetase, editing domain EP550_16170 IPR002302 Leucine-tRNA ligase EP550_16170 IPR002300 Aminoacyl-tRNA synthetase, class Ia EP550_16170 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site EP550_16170 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain EP550_16185 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain EP550_16185 IPR006143 RND efflux pump, membrane fusion protein EP550_16185 IPR030190 Macrolide export protein MacA EP550_16190 IPR003838 ABC transporter permease protein domain EP550_16190 IPR003439 ABC transporter-like EP550_16190 IPR017911 ABC transporter, macrolide export, ATP-binding domain EP550_16190 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_16190 IPR003593 AAA+ ATPase domain EP550_16190 IPR025857 MacB-like periplasmic core domain EP550_16190 IPR017871 ABC transporter, conserved site EP550_16195 IPR010131 RND efflux system, outer membrane lipoprotein, NodT EP550_16195 IPR003423 Outer membrane efflux protein EP550_16200 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_16200 IPR036291 NAD(P)-binding domain superfamily EP550_16200 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) EP550_16210 IPR012337 Ribonuclease H-like superfamily EP550_16210 IPR022894 Oligoribonuclease EP550_16210 IPR013520 Exonuclease, RNase T/DNA polymerase III EP550_16210 IPR036397 Ribonuclease H superfamily EP550_16215 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain EP550_16215 IPR010914 RsgA GTPase domain EP550_16215 IPR004881 Ribosome biogenesis GTPase RsgA EP550_16215 IPR012340 Nucleic acid-binding, OB-fold EP550_16215 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_16225 IPR014025 Glutaredoxin subgroup EP550_16225 IPR011900 Glutaredoxin, GrxC EP550_16225 IPR036249 Thioredoxin-like superfamily EP550_16225 IPR002109 Glutaredoxin EP550_16225 IPR011767 Glutaredoxin active site EP550_16230 IPR003708 Bacterial protein export chaperone SecB EP550_16230 IPR035958 SecB-like superfamily EP550_16245 IPR000794 Beta-ketoacyl synthase EP550_16245 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 EP550_16245 IPR018201 Beta-ketoacyl synthase, active site EP550_16245 IPR014031 Beta-ketoacyl synthase, C-terminal EP550_16245 IPR016039 Thiolase-like EP550_16245 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain EP550_16245 IPR014030 Beta-ketoacyl synthase, N-terminal EP550_16250 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_16250 IPR036291 NAD(P)-binding domain superfamily EP550_16250 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative EP550_16260 IPR000794 Beta-ketoacyl synthase EP550_16260 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain EP550_16260 IPR018201 Beta-ketoacyl synthase, active site EP550_16260 IPR014031 Beta-ketoacyl synthase, C-terminal EP550_16260 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 EP550_16260 IPR014030 Beta-ketoacyl synthase, N-terminal EP550_16260 IPR016039 Thiolase-like EP550_16270 IPR006905 Flavin-dependent halogenase EP550_16270 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_16290 IPR024083 Fumarase/histidase, N-terminal EP550_16290 IPR001106 Aromatic amino acid lyase EP550_16290 IPR022313 Phenylalanine/histidine ammonia-lyases, active site EP550_16290 IPR008948 L-Aspartase-like EP550_16290 IPR005921 Histidine ammonia-lyase EP550_16305 IPR000873 AMP-dependent synthetase/ligase EP550_16305 IPR042099 AMP-dependent synthetase-like superfamily EP550_16305 IPR020845 AMP-binding, conserved site EP550_16305 IPR025110 AMP-binding enzyme, C-terminal domain EP550_16315 IPR036736 ACP-like superfamily EP550_16315 IPR003231 Acyl carrier protein (ACP) EP550_16315 IPR009081 Phosphopantetheine binding ACP domain EP550_16320 IPR003231 Acyl carrier protein (ACP) EP550_16320 IPR006162 Phosphopantetheine attachment site EP550_16320 IPR036736 ACP-like superfamily EP550_16320 IPR009081 Phosphopantetheine binding ACP domain EP550_16335 IPR015946 K homology domain-like, alpha/beta EP550_16335 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_16335 IPR031166 EngA-type guanine nucleotide-binding (G) domain EP550_16335 IPR005225 Small GTP-binding protein domain EP550_16335 IPR032859 GTPase Der, C-terminal KH-domain-like EP550_16335 IPR006073 GTP binding domain EP550_16335 IPR016484 GTP-binding protein EngA EP550_16340 IPR015943 WD40/YVTN repeat-like-containing domain superfamily EP550_16340 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily EP550_16340 IPR002372 Pyrrolo-quinoline quinone repeat EP550_16340 IPR017687 Outer membrane protein assembly factor BamB EP550_16340 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat EP550_16350 IPR015807 Histidine-tRNA ligase EP550_16350 IPR006195 Aminoacyl-tRNA synthetase, class II EP550_16350 IPR036621 Anticodon-binding domain superfamily EP550_16350 IPR004154 Anticodon-binding EP550_16350 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain EP550_16350 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit EP550_16355 IPR011005 Dihydropteroate synthase-like EP550_16355 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial EP550_16355 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type EP550_16360 IPR001387 Cro/C1-type helix-turn-helix domain EP550_16360 IPR025194 Domain of unknown function DUF4115 EP550_16360 IPR010982 Lambda repressor-like, DNA-binding domain superfamily EP550_16370 IPR027492 Dual-specificity RNA methyltransferase RlmN EP550_16370 IPR007197 Radical SAM EP550_16370 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr EP550_16370 IPR040072 Methyltransferase (Class A) EP550_16370 IPR013785 Aldolase-type TIM barrel EP550_16375 IPR023005 Nucleoside diphosphate kinase, active site EP550_16375 IPR036850 Nucleoside diphosphate kinase-like domain superfamily EP550_16375 IPR001564 Nucleoside diphosphate kinase EP550_16375 IPR034907 Nucleoside diphosphate kinase-like domain EP550_16380 IPR036762 IscX-like superfamily EP550_16380 IPR007479 ISC system FeS cluster assembly, IscX EP550_16385 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily EP550_16385 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase EP550_16390 IPR001296 Glycosyl transferase, family 1 EP550_16390 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain EP550_16395 IPR029045 ClpP/crotonase-like domain superfamily EP550_16395 IPR001478 PDZ domain EP550_16395 IPR036034 PDZ superfamily EP550_16395 IPR004447 C-terminal-processing peptidase S41A EP550_16395 IPR005151 Tail specific protease EP550_16395 IPR020992 Tail specific protease, C-terminal EP550_16395 IPR040573 Tail specific protease, N-terminal domain EP550_16400 IPR022956 Beta-hexosaminidase, bacterial EP550_16400 IPR017853 Glycoside hydrolase superfamily EP550_16400 IPR001764 Glycoside hydrolase, family 3, N-terminal EP550_16400 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily EP550_16400 IPR019800 Glycoside hydrolase, family 3, active site EP550_16410 IPR029058 Alpha/Beta hydrolase fold EP550_16410 IPR000073 Alpha/beta hydrolase fold-1 EP550_16410 IPR000639 Epoxide hydrolase-like EP550_16410 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase EP550_16415 IPR015590 Aldehyde dehydrogenase domain EP550_16415 IPR016161 Aldehyde/histidinol dehydrogenase EP550_16415 IPR000965 GPR domain EP550_16415 IPR012134 Glutamate-5-semialdehyde dehydrogenase EP550_16415 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site EP550_16415 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_16415 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_16420 IPR016161 Aldehyde/histidinol dehydrogenase EP550_16420 IPR016160 Aldehyde dehydrogenase, cysteine active site EP550_16420 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_16420 IPR015590 Aldehyde dehydrogenase domain EP550_16420 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_16425 IPR006001 Carbohydrate kinase, thermoresistant glucokinase EP550_16425 IPR031322 Shikimate kinase/gluconokinase EP550_16425 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_16430 IPR003474 Gluconate transporter EP550_16435 IPR000887 KDPG/KHG aldolase EP550_16435 IPR013785 Aldolase-type TIM barrel EP550_16435 IPR031337 KDPG/KHG aldolase, active site 1 EP550_16435 IPR031338 KDPG/KHG aldolase, active site 2 EP550_16440 IPR004786 6-phosphogluconate dehydratase EP550_16440 IPR042096 Dihydroxy-acid dehydratase, C-terminal EP550_16440 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase EP550_16440 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site EP550_16440 IPR037237 IlvD/EDD, N-terminal domain EP550_16450 IPR001460 Penicillin-binding protein, transpeptidase EP550_16450 IPR012338 Beta-lactamase/transpeptidase-like EP550_16460 IPR000890 Aliphatic acid kinase, short-chain EP550_16460 IPR004372 Acetate/propionate kinase EP550_16460 IPR023865 Aliphatic acid kinase, short-chain, conserved site EP550_16465 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_16465 IPR002505 Phosphate acetyl/butaryl transferase EP550_16465 IPR004614 Phosphate acetyltransferase EP550_16465 IPR042113 Phosphate acetyltransferase, domain 1 EP550_16465 IPR042112 Phosphate acetyltransferase, domain 2 EP550_16465 IPR016475 Phosphate acetyltransferase, bacteria EP550_16465 IPR010766 DRTGG EP550_16465 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily EP550_16470 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain EP550_16470 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain EP550_16470 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily EP550_16470 IPR011167 Iron-dependent fumarate hydratase EP550_16470 IPR020557 Fumarate lyase, conserved site EP550_16485 IPR003593 AAA+ ATPase domain EP550_16485 IPR019489 Clp ATPase, C-terminal EP550_16485 IPR004487 Clp protease, ATP-binding subunit ClpX EP550_16485 IPR010603 Zinc finger, ClpX C4-type EP550_16485 IPR003959 ATPase, AAA-type, core EP550_16485 IPR038366 Zinc finger, ClpX C4-type superfamily EP550_16485 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_16490 IPR018215 ClpP, Ser active site EP550_16490 IPR033135 ClpP, histidine active site EP550_16490 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA EP550_16490 IPR001907 ATP-dependent Clp protease proteolytic subunit EP550_16490 IPR029045 ClpP/crotonase-like domain superfamily EP550_16495 IPR037041 Trigger factor, C-terminal domain superfamily EP550_16495 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain EP550_16495 IPR008880 Trigger factor, C-terminal EP550_16495 IPR005215 Trigger factor EP550_16495 IPR008881 Trigger factor, ribosome-binding, bacterial EP550_16495 IPR036611 Trigger factor ribosome-binding domain superfamily EP550_16495 IPR027304 Trigger factor/SurA domain superfamily EP550_16500 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_16500 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP550_16500 IPR010105 TonB-dependent siderophore receptor EP550_16500 IPR039423 TonB-dependent receptor-like EP550_16500 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_16500 IPR012910 TonB-dependent receptor, plug domain EP550_16500 IPR030148 Catecholate siderophore receptor Fiu EP550_16505 IPR006620 Prolyl 4-hydroxylase, alpha subunit EP550_16505 IPR041097 PKHD-type hydroxylase C-terminal domain EP550_16505 IPR023550 PKHD-type hydroxylase EP550_16505 IPR005123 Oxoglutarate/iron-dependent dioxygenase EP550_16510 IPR013785 Aldolase-type TIM barrel EP550_16510 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily EP550_16510 IPR039371 LeuA, N-terminal catalytic TIM barrel domain EP550_16510 IPR000891 Pyruvate carboxyltransferase EP550_16510 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site EP550_16510 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain EP550_16510 IPR005668 2-isopropylmalate synthase EP550_16515 IPR008220 Homoserine/serine acetyltransferase MetX-like EP550_16515 IPR029058 Alpha/Beta hydrolase fold EP550_16515 IPR000073 Alpha/beta hydrolase fold-1 EP550_16520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_16520 IPR010743 Methionine biosynthesis MetW EP550_16520 IPR008220 Homoserine/serine acetyltransferase MetX-like EP550_16520 IPR000073 Alpha/beta hydrolase fold-1 EP550_16520 IPR029058 Alpha/Beta hydrolase fold EP550_16530 IPR020922 dITP/XTP pyrophosphatase EP550_16530 IPR002637 Ham1-like protein EP550_16530 IPR029001 Inosine triphosphate pyrophosphatase-like EP550_16540 IPR003369 Sec-independent protein translocase protein TatA/B/E EP550_16540 IPR006312 Sec-independent protein translocase protein TatA/E EP550_16545 IPR018448 Twin-arginine translocation protein TatB EP550_16545 IPR003369 Sec-independent protein translocase protein TatA/B/E EP550_16550 IPR019820 Sec-independent periplasmic protein translocase, conserved site EP550_16550 IPR002033 Sec-independent periplasmic protein translocase TatC EP550_16570 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt EP550_16585 IPR000398 Thymidylate synthase EP550_16585 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily EP550_16585 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain EP550_16585 IPR020940 Thymidylate synthase, active site EP550_16590 IPR012259 Dihydrofolate reductase EP550_16590 IPR024072 Dihydrofolate reductase-like domain superfamily EP550_16590 IPR017925 Dihydrofolate reductase conserved site EP550_16590 IPR001796 Dihydrofolate reductase domain EP550_16600 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily EP550_16600 IPR002569 Peptide methionine sulphoxide reductase MsrA EP550_16610 IPR002898 MotA/TolQ/ExbB proton channel EP550_16620 IPR002912 ACT domain EP550_16620 IPR036477 Formyl transferase, N-terminal domain superfamily EP550_16620 IPR002376 Formyl transferase, N-terminal EP550_16620 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain EP550_16620 IPR004810 Formyltetrahydrofolate deformylase EP550_16630 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_16630 IPR015590 Aldehyde dehydrogenase domain EP550_16630 IPR016161 Aldehyde/histidinol dehydrogenase EP550_16630 IPR029510 Aldehyde dehydrogenase, glutamic acid active site EP550_16630 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_16630 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent EP550_16635 IPR001383 Ribosomal protein L28 EP550_16635 IPR034704 L28p-like EP550_16635 IPR037147 Ribosomal protein L28/L24 superfamily EP550_16635 IPR026569 Ribosomal protein L28/L24 EP550_16640 IPR011332 Zinc-binding ribosomal protein EP550_16640 IPR038584 Ribosomal protein L33 superfamily EP550_16640 IPR001705 Ribosomal protein L33 EP550_16640 IPR018264 Ribosomal protein L33, conserved site EP550_16645 IPR004771 K+/H+ exchanger EP550_16645 IPR003148 Regulator of K+ conductance, N-terminal EP550_16645 IPR036291 NAD(P)-binding domain superfamily EP550_16645 IPR038770 Sodium/solute symporter superfamily EP550_16645 IPR006153 Cation/H+ exchanger EP550_16665 IPR000504 RNA recognition motif domain EP550_16665 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily EP550_16665 IPR035979 RNA-binding domain superfamily EP550_16670 IPR013986 DExx box DNA helicase domain superfamily EP550_16670 IPR005751 ATP-dependent DNA helicase PcrA EP550_16670 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_16670 IPR014017 UvrD-like DNA helicase, C-terminal EP550_16670 IPR000212 DNA helicase, UvrD/REP type EP550_16670 IPR034739 UvrD/AddA helicase, N-terminal EP550_16670 IPR014016 UvrD-like helicase, ATP-binding domain EP550_16685 IPR013497 DNA topoisomerase, type IA, central EP550_16685 IPR000380 DNA topoisomerase, type IA EP550_16685 IPR003601 DNA topoisomerase, type IA, domain 2 EP550_16685 IPR034149 DNA topoisomerase 1, TOPRIM domain EP550_16685 IPR028612 DNA topoisomerase I, type IA EP550_16685 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type EP550_16685 IPR023406 DNA topoisomerase, type IA, active site EP550_16685 IPR005733 DNA topoisomerase I, bacterial-type EP550_16685 IPR003602 DNA topoisomerase, type IA, DNA-binding domain EP550_16685 IPR023405 DNA topoisomerase, type IA, core domain EP550_16685 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 EP550_16685 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 EP550_16685 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 EP550_16685 IPR013498 DNA topoisomerase, type IA, zn finger EP550_16685 IPR006171 TOPRIM domain EP550_16695 IPR036390 Winged helix DNA-binding domain superfamily EP550_16695 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_16695 IPR002577 Helix-turn-helix, HxlR type EP550_16700 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site EP550_16700 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 EP550_16700 IPR011032 GroES-like superfamily EP550_16700 IPR036291 NAD(P)-binding domain superfamily EP550_16700 IPR020843 Polyketide synthase, enoylreductase domain EP550_16700 IPR013154 Alcohol dehydrogenase, N-terminal EP550_16700 IPR013149 Alcohol dehydrogenase, C-terminal EP550_16715 IPR001123 Amino acid exporter protein, LeuE-type EP550_16715 IPR004778 Homoserine/Threonine efflux protein EP550_16720 IPR004960 Bacterial lipid A biosynthesis acyltransferase EP550_16720 IPR011921 Lipid A biosynthesis myristoyltransferase EP550_16730 IPR018107 Sodium:dicarboxylate symporter, conserved site EP550_16730 IPR001991 Sodium:dicarboxylate symporter EP550_16730 IPR034703 Proton/glutamate-aspartate symporter GltP EP550_16730 IPR033380 Glutamate-aspartate symport protein GltP/GltT EP550_16730 IPR036458 Sodium:dicarboxylate symporter superfamily EP550_16740 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site EP550_16740 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type EP550_16740 IPR036291 NAD(P)-binding domain superfamily EP550_16740 IPR012080 Aspartate-semialdehyde dehydrogenase EP550_16740 IPR012280 Semialdehyde dehydrogenase, dimerisation domain EP550_16740 IPR000534 Semialdehyde dehydrogenase, NAD-binding EP550_16760 IPR020095 Pseudouridine synthase I, TruA, C-terminal EP550_16760 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain EP550_16760 IPR001406 Pseudouridine synthase I, TruA EP550_16760 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP550_16770 IPR004368 Translation initiation factor IF-1 EP550_16770 IPR022967 RNA-binding domain, S1 EP550_16770 IPR006196 RNA-binding domain, S1, IF1 type EP550_16770 IPR012340 Nucleic acid-binding, OB-fold EP550_16785 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site EP550_16785 IPR004429 Isopropylmalate dehydrogenase EP550_16785 IPR024084 Isopropylmalate dehydrogenase-like domain EP550_16795 IPR033940 3-isopropylmalate dehydratase, swivel domain EP550_16795 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain EP550_16795 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel EP550_16795 IPR004431 3-isopropylmalate dehydratase, small subunit EP550_16800 IPR036008 Aconitase, iron-sulfur domain EP550_16800 IPR018136 Aconitase family, 4Fe-4S cluster binding site EP550_16800 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain EP550_16800 IPR004430 3-isopropylmalate dehydratase, large subunit EP550_16800 IPR033941 3-Isopropylmalate dehydratase, catalytic domain EP550_16800 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 EP550_16810 IPR005119 LysR, substrate-binding EP550_16810 IPR000847 Transcription regulator HTH, LysR EP550_16810 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_16810 IPR036390 Winged helix DNA-binding domain superfamily EP550_16830 IPR022927 RNA pyrophosphohydrolase RppH EP550_16830 IPR020476 NUDIX hydrolase EP550_16830 IPR015797 NUDIX hydrolase-like domain superfamily EP550_16830 IPR020084 NUDIX hydrolase, conserved site EP550_16830 IPR000086 NUDIX hydrolase domain EP550_16835 IPR006318 Phosphotransferase system, enzyme I-like EP550_16835 IPR008731 Phosphotransferase system, enzyme I N-terminal EP550_16835 IPR036618 PtsI, HPr-binding domain superfamily EP550_16835 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily EP550_16835 IPR040442 Pyruvate kinase-like domain superfamily EP550_16835 IPR000121 PEP-utilising enzyme, C-terminal EP550_16835 IPR018274 PEP-utilising enzyme, active site EP550_16835 IPR008279 PEP-utilising enzyme, mobile domain EP550_16835 IPR029016 GAF-like domain superfamily EP550_16835 IPR003018 GAF domain EP550_16835 IPR023151 PEP-utilising enzyme, conserved site EP550_16835 IPR036637 Phosphohistidine domain superfamily EP550_16840 IPR002016 Haem peroxidase EP550_16840 IPR010255 Haem peroxidase superfamily EP550_16840 IPR019794 Peroxidase, active site EP550_16840 IPR000763 Catalase-peroxidase haem EP550_16845 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP550_16845 IPR001279 Metallo-beta-lactamase EP550_16845 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D EP550_16850 IPR000847 Transcription regulator HTH, LysR EP550_16850 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_16850 IPR036390 Winged helix DNA-binding domain superfamily EP550_16850 IPR005119 LysR, substrate-binding EP550_16855 IPR025668 Transposase DDE domain EP550_16865 IPR010987 Glutathione S-transferase, C-terminal-like EP550_16865 IPR036282 Glutathione S-transferase, C-terminal domain superfamily EP550_16865 IPR036249 Thioredoxin-like superfamily EP550_16865 IPR004045 Glutathione S-transferase, N-terminal EP550_16865 IPR040079 Glutathione Transferase family EP550_16870 IPR001034 DeoR-type HTH domain EP550_16870 IPR036390 Winged helix DNA-binding domain superfamily EP550_16870 IPR028349 Protein PafC EP550_16870 IPR026881 WYL domain EP550_16870 IPR013196 Helix-turn-helix, type 11 EP550_16870 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_16875 IPR006439 HAD hydrolase, subfamily IA EP550_16875 IPR023733 Pyrophosphatase PpaX EP550_16875 IPR023198 Phosphoglycolate phosphatase-like, domain 2 EP550_16875 IPR023214 HAD superfamily EP550_16875 IPR041492 Haloacid dehalogenase-like hydrolase EP550_16875 IPR036412 HAD-like superfamily EP550_16880 IPR006225 Pseudouridine synthase, RluC/RluD EP550_16880 IPR036986 RNA-binding S4 domain superfamily EP550_16880 IPR006145 Pseudouridine synthase, RsuA/RluA EP550_16880 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site EP550_16880 IPR002942 RNA-binding S4 domain EP550_16880 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP550_16890 IPR003029 S1 domain EP550_16890 IPR022967 RNA-binding domain, S1 EP550_16890 IPR004659 Ribonuclease E/G EP550_16890 IPR028878 Ribonuclease E EP550_16890 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G EP550_16890 IPR021968 Polyribonucleotide phosphorylase C-terminal EP550_16890 IPR012340 Nucleic acid-binding, OB-fold EP550_16895 IPR042099 AMP-dependent synthetase-like superfamily EP550_16895 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 EP550_16895 IPR000873 AMP-dependent synthetase/ligase EP550_16895 IPR020845 AMP-binding, conserved site EP550_16895 IPR025110 AMP-binding enzyme, C-terminal domain EP550_16905 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_16905 IPR000847 Transcription regulator HTH, LysR EP550_16905 IPR005119 LysR, substrate-binding EP550_16905 IPR036390 Winged helix DNA-binding domain superfamily EP550_16910 IPR036291 NAD(P)-binding domain superfamily EP550_16910 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_16915 IPR034505 Anaerobic coproporphyrinogen-III oxidase EP550_16915 IPR006638 Elp3/MiaB/NifB EP550_16915 IPR023404 Radical SAM, alpha/beta horseshoe EP550_16915 IPR010723 HemN, C-terminal EP550_16915 IPR004559 Heme chaperone HemW-like EP550_16915 IPR007197 Radical SAM EP550_16925 IPR002528 Multi antimicrobial extrusion protein EP550_16930 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain EP550_16930 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_16930 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_16930 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_16930 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_16930 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_16935 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_16935 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_16935 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_16935 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain EP550_16935 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_16940 IPR011009 Protein kinase-like domain superfamily EP550_16940 IPR000719 Protein kinase domain EP550_16940 IPR004147 UbiB domain EP550_16945 IPR034704 L28p-like EP550_16945 IPR042105 Ribosomal protein L31 superfamily EP550_16945 IPR002150 Ribosomal protein L31 EP550_16945 IPR027493 Ribosomal protein L31 type B EP550_16960 IPR003691 Putative fluoride ion transporter CrcB EP550_16980 IPR005584 DNA gyrase inhibitor YacG EP550_16980 IPR013088 Zinc finger, NHR/GATA-type EP550_16985 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like EP550_16985 IPR001279 Metallo-beta-lactamase EP550_16990 IPR033659 Ferrochelatase, N-terminal EP550_16990 IPR001015 Ferrochelatase EP550_16990 IPR033644 Ferrochelatase, C-terminal EP550_16990 IPR019772 Ferrochelatase, active site EP550_17000 IPR015942 Asp/Glu/hydantoin racemase EP550_17000 IPR033134 Asp/Glu racemase, active site 2 EP550_17000 IPR004391 Glutamate racemase EP550_17000 IPR018187 Asp/Glu racemase, active site 1 EP550_17000 IPR001920 Asp/Glu racemase EP550_17010 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_17010 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase EP550_17010 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain EP550_17015 IPR036868 TusA-like domain superfamily EP550_17015 IPR022931 Sulfur carrier protein TusA EP550_17015 IPR001455 TusA-like domain EP550_17020 IPR000644 CBS domain EP550_17020 IPR036318 FAD-binding, type PCMH-like superfamily EP550_17020 IPR005170 Transporter-associated domain EP550_17020 IPR016169 FAD-binding, type PCMH, subdomain 2 EP550_17025 IPR036526 Carbon-nitrogen hydrolase superfamily EP550_17025 IPR003010 Carbon-nitrogen hydrolase EP550_17025 IPR004563 Apolipoprotein N-acyltransferase EP550_17030 IPR012340 Nucleic acid-binding, OB-fold EP550_17030 IPR008231 Probable chaperone CsaA EP550_17030 IPR002547 tRNA-binding domain EP550_17040 IPR013545 Type II secretion system protein G EP550_17040 IPR010054 General secretion pathway protein G EP550_17040 IPR012902 Prokaryotic N-terminal methylation site EP550_17040 IPR000983 Bacterial general secretion pathway protein G-type pilin EP550_17045 IPR003004 GspF/PilC family EP550_17045 IPR042094 Type II secretion system F domain superfamily EP550_17045 IPR011850 General secretion pathway protein F EP550_17045 IPR001992 Type II secretion system conserved site EP550_17045 IPR018076 Type II secretion system F domain EP550_17050 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_17050 IPR005259 Primosomal protein N' EP550_17050 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily EP550_17050 IPR001650 Helicase, C-terminal EP550_17050 IPR041236 Primosomal protein N, C-terminal domain EP550_17050 IPR014001 Helicase superfamily 1/2, ATP-binding domain EP550_17050 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain EP550_17050 IPR041222 Primosomal protein N', 3' DNA-binding domain EP550_17050 IPR011545 DEAD/DEAH box helicase domain EP550_17055 IPR038770 Sodium/solute symporter superfamily EP550_17055 IPR020884 Glutathione-regulated potassium-efflux system protein KefB EP550_17055 IPR036291 NAD(P)-binding domain superfamily EP550_17055 IPR004771 K+/H+ exchanger EP550_17055 IPR003148 Regulator of K+ conductance, N-terminal EP550_17055 IPR006153 Cation/H+ exchanger EP550_17060 IPR016154 Heat shock protein Hsp33, C-terminal EP550_17060 IPR000397 Heat shock protein Hsp33 EP550_17060 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily EP550_17060 IPR016153 Heat shock protein Hsp33, N-terminal EP550_17070 IPR002939 Chaperone DnaJ, C-terminal EP550_17070 IPR036869 Chaperone J-domain superfamily EP550_17070 IPR023859 DNA-binding protein, curved-DNA EP550_17070 IPR008971 HSP40/DnaJ peptide-binding EP550_17070 IPR018253 DnaJ domain, conserved site EP550_17070 IPR001623 DnaJ domain EP550_17075 IPR022835 Chaperone modulatory protein CbpM EP550_17080 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB EP550_17080 IPR004488 Magnesium/cobalt transport protein CorA EP550_17085 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily EP550_17085 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain EP550_17085 IPR003029 S1 domain EP550_17085 IPR012162 Polyribonucleotide nucleotidyltransferase EP550_17085 IPR001247 Exoribonuclease, phosphorolytic domain 1 EP550_17085 IPR015847 Exoribonuclease, phosphorolytic domain 2 EP550_17085 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_17085 IPR027408 PNPase/RNase PH domain superfamily EP550_17085 IPR004088 K Homology domain, type 1 EP550_17085 IPR004087 K Homology domain EP550_17085 IPR022967 RNA-binding domain, S1 EP550_17085 IPR036612 K Homology domain, type 1 superfamily EP550_17085 IPR012340 Nucleic acid-binding, OB-fold EP550_17085 IPR036345 Exoribonuclease, PH domain 2 superfamily EP550_17090 IPR000589 Ribosomal protein S15 EP550_17090 IPR005290 Ribosomal protein S15, bacterial-type EP550_17090 IPR009068 S15/NS1, RNA-binding EP550_17100 IPR027785 UvrD-like helicase C-terminal domain EP550_17100 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain EP550_17100 IPR006344 RecBCD enzyme subunit RecD EP550_17100 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_17100 IPR003593 AAA+ ATPase domain EP550_17105 IPR011604 Exonuclease, phage-type/RecB, C-terminal EP550_17105 IPR014017 UvrD-like DNA helicase, C-terminal EP550_17105 IPR000212 DNA helicase, UvrD/REP type EP550_17105 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_17105 IPR034739 UvrD/AddA helicase, N-terminal EP550_17105 IPR014016 UvrD-like helicase, ATP-binding domain EP550_17105 IPR011335 Restriction endonuclease type II-like EP550_17105 IPR004586 RecBCD enzyme subunit RecB EP550_17105 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type EP550_17110 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_17110 IPR006697 RecBCD enzyme subunit RecC EP550_17110 IPR041500 RecC, C-terminal EP550_17110 IPR011335 Restriction endonuclease type II-like EP550_17110 IPR013986 DExx box DNA helicase domain superfamily EP550_17120 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_17120 IPR022488 Polyphosphate kinase-2-related EP550_17130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_17130 IPR023576 UbiE/COQ5 methyltransferase, conserved site EP550_17130 IPR004033 UbiE/COQ5 methyltransferase EP550_17140 IPR004147 UbiB domain EP550_17140 IPR010232 Probable protein kinase UbiB EP550_17140 IPR011009 Protein kinase-like domain superfamily EP550_17145 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_17145 IPR002938 FAD-binding domain EP550_17150 IPR026660 Phosphoribosyl-AMP cyclohydrolase EP550_17150 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily EP550_17150 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain EP550_17165 IPR005281 Monovalent cation:proton antiporter, subunit B EP550_17165 IPR025383 Domain of unknown function DUF4040 EP550_17165 IPR007182 Na+/H+ antiporter MnhB subunit-related protein EP550_17165 IPR005663 Monovalent cation proton antiporter subunit A EP550_17165 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit EP550_17165 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal EP550_17170 IPR006673 Mnh complex subunit C1 EP550_17170 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like EP550_17175 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit EP550_17175 IPR004775 Na(+)/H(+) antiporter subunit D1 EP550_17185 IPR007208 Na(+)/H(+) antiporter subunit F-like EP550_17195 IPR023799 Ribosome-binding factor A domain superfamily EP550_17195 IPR000238 Ribosome-binding factor A EP550_17195 IPR015946 K homology domain-like, alpha/beta EP550_17200 IPR009000 Translation protein, beta-barrel domain superfamily EP550_17200 IPR006847 Translation initiation factor IF-2, N-terminal EP550_17200 IPR036925 Translation initiation factor IF-2, domain 3 superfamily EP550_17200 IPR023115 Translation initiation factor IF- 2, domain 3 EP550_17200 IPR015760 Translation initiation factor IF- 2 EP550_17200 IPR000178 Translation initiation factor aIF-2, bacterial-like EP550_17200 IPR000795 Transcription factor, GTP-binding domain EP550_17200 IPR005225 Small GTP-binding protein domain EP550_17200 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_17200 IPR013575 Initiation factor 2 associated domain, bacterial EP550_17200 IPR009061 Putative DNA-binding domain superfamily EP550_17205 IPR030842 Transcription termination/antitermination protein NusA, bacterial EP550_17205 IPR003029 S1 domain EP550_17205 IPR022967 RNA-binding domain, S1 EP550_17205 IPR013735 Transcription factor NusA, N-terminal EP550_17205 IPR010213 Transcription termination factor NusA EP550_17205 IPR012340 Nucleic acid-binding, OB-fold EP550_17205 IPR009019 K homology domain superfamily, prokaryotic type EP550_17205 IPR025249 KH domain, NusA-like EP550_17205 IPR015946 K homology domain-like, alpha/beta EP550_17205 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical EP550_17205 IPR010214 Transcription termination factor NusA, C-terminal duplication EP550_17205 IPR036555 NusA, N-terminal domain superfamily EP550_17210 IPR035956 RimP, N-terminal domain superfamily EP550_17210 IPR028989 Ribosome maturation factor RimP, N-terminal EP550_17210 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily EP550_17210 IPR028998 Ribosome maturation factor RimP, C-terminal EP550_17210 IPR003728 Ribosome maturation factor RimP EP550_17230 IPR004692 Preprotein translocase SecG subunit EP550_17235 IPR020861 Triosephosphate isomerase, active site EP550_17235 IPR000652 Triosephosphate isomerase EP550_17235 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic EP550_17235 IPR035990 Triosephosphate isomerase superfamily EP550_17235 IPR013785 Aldolase-type TIM barrel EP550_17240 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_17240 IPR001482 Type II/IV secretion system protein EP550_17240 IPR037257 General secretory system II, protein E, N-terminal superfamily EP550_17240 IPR013374 ATPase, type IV, pilus assembly, PilB EP550_17240 IPR042181 Type II secretion system, protein E, N-terminal EP550_17240 IPR007831 General secretory system II, protein E, N-terminal EP550_17245 IPR042094 Type II secretion system F domain superfamily EP550_17245 IPR018076 Type II secretion system F domain EP550_17245 IPR001992 Type II secretion system conserved site EP550_17245 IPR003004 GspF/PilC family EP550_17250 IPR014032 Peptidase A24A, prepilin type IV, bacterial EP550_17250 IPR000045 Prepilin type IV endopeptidase, peptidase domain EP550_17250 IPR010627 Peptidase A24A, N-terminal EP550_17255 IPR001977 Dephospho-CoA kinase EP550_17255 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_17265 IPR013123 RNA 2-O ribose methyltransferase, substrate binding EP550_17265 IPR001537 tRNA/rRNA methyltransferase, SpoU type EP550_17265 IPR004441 RNA methyltransferase TrmH family EP550_17265 IPR029064 50S ribosomal protein L30e-like EP550_17265 IPR029028 Alpha/beta knot methyltransferases EP550_17265 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal EP550_17265 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB EP550_17270 IPR009664 Pyrimidine/purine nucleoside phosphorylase EP550_17270 IPR014710 RmlC-like jelly roll fold EP550_17270 IPR011051 RmlC-like cupin domain superfamily EP550_17280 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_17280 IPR003395 RecF/RecN/SMC, N-terminal EP550_17280 IPR004604 DNA recombination/repair protein RecN EP550_17285 IPR003774 Protein of unknown function UPF0301 EP550_17290 IPR037027 YqgF/RNase H-like domain superfamily EP550_17290 IPR012337 Ribonuclease H-like superfamily EP550_17290 IPR005227 Putative pre-16S rRNA nuclease EP550_17290 IPR006641 YqgF/RNase H-like domain EP550_17295 IPR006143 RND efflux pump, membrane fusion protein EP550_17295 IPR039562 Membrane fusion protein, biotin-lipoyl like domain EP550_17295 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA EP550_17320 IPR016221 Bifunctional regulatory protein Ada EP550_17320 IPR009057 Homeobox-like domain superfamily EP550_17320 IPR004026 Ada DNA repair, metal-binding EP550_17320 IPR035451 Ada-like domain superfamily EP550_17320 IPR018060 DNA binding HTH domain, AraC-type EP550_17320 IPR018062 HTH domain AraC-type, conserved site EP550_17320 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_17320 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily EP550_17320 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain EP550_17320 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site EP550_17320 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain EP550_17320 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding EP550_17325 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase EP550_17325 IPR000462 CDP-alcohol phosphatidyltransferase EP550_17325 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial EP550_17335 IPR000305 GIY-YIG endonuclease EP550_17335 IPR035901 GIY-YIG endonuclease superfamily EP550_17335 IPR010994 RuvA domain 2-like EP550_17335 IPR001943 UVR domain EP550_17335 IPR036876 UVR domain superfamily EP550_17335 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 EP550_17335 IPR001162 UvrC family homology region EP550_17335 IPR038476 UvrC homology region 2 superfamily EP550_17335 IPR004791 UvrABC system, subunit C EP550_17360 IPR001753 Enoyl-CoA hydratase/isomerase EP550_17360 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site EP550_17360 IPR029045 ClpP/crotonase-like domain superfamily EP550_17360 IPR012799 Fatty oxidation complex, alpha subunit FadB EP550_17360 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP550_17360 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal EP550_17360 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding EP550_17360 IPR036291 NAD(P)-binding domain superfamily EP550_17360 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site EP550_17365 IPR012805 Acetyl-CoA C-acyltransferase FadA EP550_17365 IPR020616 Thiolase, N-terminal EP550_17365 IPR002155 Thiolase EP550_17365 IPR016039 Thiolase-like EP550_17365 IPR020615 Thiolase, acyl-enzyme intermediate active site EP550_17365 IPR020617 Thiolase, C-terminal EP550_17365 IPR020613 Thiolase, conserved site EP550_17365 IPR020610 Thiolase, active site EP550_17385 IPR000551 MerR-type HTH domain EP550_17385 IPR009061 Putative DNA-binding domain superfamily EP550_17385 IPR015358 Transcription regulator MerR, DNA binding EP550_17385 IPR011789 Cu(I)-responsive transcriptional regulator EP550_17395 IPR001853 DSBA-like thioredoxin domain EP550_17395 IPR036249 Thioredoxin-like superfamily EP550_17410 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_17410 IPR001404 Heat shock protein Hsp90 family EP550_17410 IPR037196 HSP90, C-terminal domain EP550_17410 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_17410 IPR020575 Heat shock protein Hsp90, N-terminal EP550_17410 IPR003594 Histidine kinase/HSP90-like ATPase EP550_17425 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal EP550_17425 IPR032813 Putative Na+/H+ antiporter, N-terminal EP550_17430 IPR000073 Alpha/beta hydrolase fold-1 EP550_17430 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase EP550_17430 IPR029058 Alpha/Beta hydrolase fold EP550_17455 IPR038120 RNA polymerase Rpb1, funnel domain superfamily EP550_17455 IPR007066 RNA polymerase Rpb1, domain 3 EP550_17455 IPR007083 RNA polymerase Rpb1, domain 4 EP550_17455 IPR007080 RNA polymerase Rpb1, domain 1 EP550_17455 IPR042102 RNA polymerase Rpb1, domain 3 superfamily EP550_17455 IPR000722 RNA polymerase, alpha subunit EP550_17455 IPR012754 DNA-directed RNA polymerase, subunit beta-prime EP550_17455 IPR007081 RNA polymerase Rpb1, domain 5 EP550_17455 IPR006592 RNA polymerase, N-terminal EP550_17460 IPR007641 RNA polymerase Rpb2, domain 7 EP550_17460 IPR007645 RNA polymerase Rpb2, domain 3 EP550_17460 IPR037034 RNA polymerase Rpb2, domain 2 superfamily EP550_17460 IPR007642 RNA polymerase Rpb2, domain 2 EP550_17460 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain EP550_17460 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type EP550_17460 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily EP550_17460 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain EP550_17460 IPR015712 DNA-directed RNA polymerase, subunit 2 EP550_17460 IPR007644 RNA polymerase, beta subunit, protrusion EP550_17460 IPR007121 RNA polymerase, beta subunit, conserved site EP550_17460 IPR014724 RNA polymerase Rpb2, OB-fold EP550_17460 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily EP550_17465 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily EP550_17465 IPR008932 Ribosomal protein L7/L12, oligomerisation EP550_17465 IPR013823 Ribosomal protein L7/L12, C-terminal EP550_17465 IPR000206 Ribosomal protein L7/L12 EP550_17465 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like EP550_17470 IPR001790 Ribosomal protein L10P EP550_17470 IPR022973 Ribosomal protein L10 EP550_17470 IPR002363 Ribosomal protein L10, eubacterial, conserved site EP550_17475 IPR023673 Ribosomal protein L1, conserved site EP550_17475 IPR005878 Ribosomal protein L1, bacterial-type EP550_17475 IPR002143 Ribosomal protein L1 EP550_17475 IPR023674 Ribosomal protein L1-like EP550_17475 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich EP550_17475 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein EP550_17480 IPR020783 Ribosomal protein L11, C-terminal EP550_17480 IPR020784 Ribosomal protein L11, N-terminal EP550_17480 IPR036769 Ribosomal protein L11, C-terminal domain superfamily EP550_17480 IPR000911 Ribosomal protein L11/L12 EP550_17480 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily EP550_17480 IPR020785 Ribosomal protein L11, conserved site EP550_17480 IPR006519 Ribosomal protein L11, bacterial-type EP550_17485 IPR008991 Translation protein SH3-like domain superfamily EP550_17485 IPR014722 Ribosomal protein L2, domain 2 EP550_17485 IPR006645 NusG, N-terminal EP550_17485 IPR005824 KOW EP550_17485 IPR001062 Transcription antitermination protein, NusG EP550_17485 IPR036735 NusG, N-terminal domain superfamily EP550_17485 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site EP550_17490 IPR005807 SecE subunit of protein translocation complex, bacterial-like EP550_17490 IPR038379 SecE superfamily EP550_17490 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit EP550_17500 IPR009000 Translation protein, beta-barrel domain superfamily EP550_17500 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain EP550_17500 IPR004161 Translation elongation factor EFTu-like, domain 2 EP550_17500 IPR033720 Elongation factor Tu, domain 2 EP550_17500 IPR031157 Tr-type G domain, conserved site EP550_17500 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal EP550_17500 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle EP550_17500 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_17500 IPR005225 Small GTP-binding protein domain EP550_17500 IPR000795 Transcription factor, GTP-binding domain EP550_17500 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal EP550_17525 IPR019999 Anthranilate synthase component I-like EP550_17525 IPR005801 ADC synthase EP550_17525 IPR006805 Anthranilate synthase component I, N-terminal EP550_17525 IPR005256 Anthranilate synthase component I, PabB-like EP550_17525 IPR015890 Chorismate-utilising enzyme, C-terminal EP550_17530 IPR041492 Haloacid dehalogenase-like hydrolase EP550_17530 IPR006439 HAD hydrolase, subfamily IA EP550_17530 IPR023214 HAD superfamily EP550_17530 IPR023198 Phosphoglycolate phosphatase-like, domain 2 EP550_17530 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic EP550_17530 IPR037512 Phosphoglycolate phosphatase, prokaryotic EP550_17530 IPR036412 HAD-like superfamily EP550_17535 IPR022128 Domain of unknown function DUF3662 EP550_17535 IPR042287 FhaA, N-terminal EP550_17535 IPR008984 SMAD/FHA domain superfamily EP550_17535 IPR000253 Forkhead-associated (FHA) domain EP550_17540 IPR004845 Type II secretion system GspD, conserved site EP550_17540 IPR001775 GspD/PilQ family EP550_17540 IPR005644 NolW-like EP550_17540 IPR038591 NolW-like superfamily EP550_17540 IPR004846 Type II/III secretion system EP550_17540 IPR013356 Type II secretion system GspD EP550_17555 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily EP550_17555 IPR001801 Histone-like protein H-NS EP550_17555 IPR027444 Histone-like protein H-NS, C-terminal domain EP550_17580 IPR022418 Porphobilinogen deaminase, C-terminal EP550_17580 IPR000860 Porphobilinogen deaminase EP550_17580 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site EP550_17580 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily EP550_17580 IPR022417 Porphobilinogen deaminase, N-terminal EP550_17585 IPR011006 CheY-like superfamily EP550_17585 IPR001789 Signal transduction response regulator, receiver domain EP550_17585 IPR007492 LytTR DNA-binding domain EP550_17590 IPR029016 GAF-like domain superfamily EP550_17590 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region EP550_17590 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_17590 IPR010559 Signal transduction histidine kinase, internal region EP550_17590 IPR003594 Histidine kinase/HSP90-like ATPase EP550_17595 IPR029419 Argininosuccinate lyase, C-terminal EP550_17595 IPR009049 Argininosuccinate lyase EP550_17595 IPR024083 Fumarase/histidase, N-terminal EP550_17595 IPR020557 Fumarate lyase, conserved site EP550_17595 IPR000362 Fumarate lyase family EP550_17595 IPR022761 Fumarate lyase, N-terminal EP550_17595 IPR008948 L-Aspartase-like EP550_17600 IPR036766 Fe(II) trafficking protein YggX superfamily EP550_17600 IPR007457 Fe(II) trafficking protein YggX EP550_17605 IPR026022 PhoU domain EP550_17605 IPR028366 Phosphate transport system protein PhoU EP550_17605 IPR038078 PhoU-like domain superfamily EP550_17610 IPR003423 Outer membrane efflux protein EP550_17610 IPR010130 Type I secretion outer membrane protein, TolC EP550_17615 IPR000620 EamA domain EP550_17615 IPR004779 Carboxylate/Amino Acid/Amine Transporter EP550_17630 IPR037509 Phosphomethylpyrimidine synthase EP550_17630 IPR025747 ThiC-associated domain EP550_17630 IPR038521 ThiC/Bza superfamily EP550_17630 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B EP550_17635 IPR015797 NUDIX hydrolase-like domain superfamily EP550_17635 IPR000086 NUDIX hydrolase domain EP550_17635 IPR004385 Nucleoside diphosphate pyrophosphatase EP550_17640 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type EP550_17640 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA EP550_17640 IPR029052 Metallo-dependent phosphatase-like EP550_17645 IPR020458 Zinc finger, DksA/TraR C4-type conserved site EP550_17645 IPR037187 DksA, N-terminal domain superfamily EP550_17645 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria EP550_17645 IPR000962 Zinc finger, DksA/TraR C4-type EP550_17645 IPR012784 RNA polymerase-binding transcription factor DksA EP550_17650 IPR022380 Glutamyl-Q tRNA(Asp) synthetase EP550_17650 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain EP550_17650 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_17650 IPR000924 Glutamyl/glutaminyl-tRNA synthetase EP550_17655 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA EP550_17655 IPR013437 Probable peptidoglycan glycosyltransferase FtsW EP550_17655 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site EP550_17660 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase EP550_17660 IPR036615 Mur ligase, C-terminal domain superfamily EP550_17660 IPR013221 Mur ligase, central EP550_17660 IPR036565 Mur-like, catalytic domain superfamily EP550_17660 IPR004101 Mur ligase, C-terminal EP550_17670 IPR003373 Ferrous iron transport protein B EP550_17670 IPR011640 Ferrous iron transport protein B, C-terminal EP550_17670 IPR030389 FeoB-type guanine nucleotide-binding (G) domain EP550_17670 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain EP550_17670 IPR006073 GTP binding domain EP550_17670 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_17680 IPR011932 Tyrosine recombinase XerD EP550_17680 IPR013762 Integrase-like, catalytic domain superfamily EP550_17680 IPR002104 Integrase, catalytic domain EP550_17680 IPR010998 Integrase/recombinase, N-terminal EP550_17680 IPR004107 Integrase, SAM-like, N-terminal EP550_17680 IPR023009 Tyrosine recombinase XerC/XerD EP550_17680 IPR011010 DNA breaking-rejoining enzyme, catalytic core EP550_17685 IPR013766 Thioredoxin domain EP550_17685 IPR017937 Thioredoxin, conserved site EP550_17685 IPR036249 Thioredoxin-like superfamily EP550_17685 IPR012336 Thioredoxin-like fold EP550_17685 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily EP550_17685 IPR033954 Disulphide bond isomerase, DsbC/G EP550_17685 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal EP550_17690 IPR016204 Homoserine dehydrogenase EP550_17690 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding EP550_17690 IPR002912 ACT domain EP550_17690 IPR019811 Homoserine dehydrogenase, conserved site EP550_17690 IPR001342 Homoserine dehydrogenase, catalytic EP550_17690 IPR036291 NAD(P)-binding domain superfamily EP550_17695 IPR001926 Pyridoxal-phosphate dependent enzyme EP550_17695 IPR004450 Threonine synthase-like EP550_17695 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP550_17695 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site EP550_17695 IPR026260 Threonine synthase, bacterial/archaeal EP550_17700 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal EP550_17700 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A EP550_17700 IPR012338 Beta-lactamase/transpeptidase-like EP550_17705 IPR000792 Transcription regulator LuxR, C-terminal EP550_17705 IPR001789 Signal transduction response regulator, receiver domain EP550_17705 IPR011006 CheY-like superfamily EP550_17705 IPR016032 Signal transduction response regulator, C-terminal effector EP550_17710 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily EP550_17710 IPR000014 PAS domain EP550_17710 IPR004358 Signal transduction histidine kinase-related protein, C-terminal EP550_17710 IPR036890 Histidine kinase/HSP90-like ATPase superfamily EP550_17710 IPR005467 Histidine kinase domain EP550_17710 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain EP550_17710 IPR003594 Histidine kinase/HSP90-like ATPase EP550_17715 IPR009057 Homeobox-like domain superfamily EP550_17715 IPR002197 DNA binding HTH domain, Fis-type EP550_17715 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_17715 IPR001789 Signal transduction response regulator, receiver domain EP550_17715 IPR002078 RNA polymerase sigma factor 54 interaction domain EP550_17715 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 EP550_17715 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 EP550_17715 IPR025944 Sigma-54 interaction domain, conserved site EP550_17715 IPR011006 CheY-like superfamily EP550_17715 IPR003593 AAA+ ATPase domain EP550_17720 IPR029045 ClpP/crotonase-like domain superfamily EP550_17720 IPR001478 PDZ domain EP550_17720 IPR036034 PDZ superfamily EP550_17720 IPR004447 C-terminal-processing peptidase S41A EP550_17720 IPR005151 Tail specific protease EP550_17725 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily EP550_17725 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent EP550_17725 IPR006124 Metalloenzyme EP550_17725 IPR011258 BPG-independent PGAM, N-terminal EP550_17725 IPR017850 Alkaline-phosphatase-like, core domain superfamily EP550_17730 IPR030923 LPS export ABC transporter permease LptG EP550_17730 IPR005495 Permease LptG/LptF-related EP550_17740 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B EP550_17740 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal EP550_17740 IPR023042 Peptidase M17, leucine aminopeptidase EP550_17740 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal EP550_17760 IPR001783 Lumazine-binding protein EP550_17760 IPR026017 Lumazine-binding domain EP550_17760 IPR017938 Riboflavin synthase-like beta-barrel EP550_17760 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily EP550_17770 IPR002125 Cytidine and deoxycytidylate deaminase domain EP550_17770 IPR016193 Cytidine deaminase-like EP550_17770 IPR024072 Dihydrofolate reductase-like domain superfamily EP550_17770 IPR004794 Riboflavin biosynthesis protein RibD EP550_17770 IPR016192 APOBEC/CMP deaminase, zinc-binding EP550_17770 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal EP550_17770 IPR011549 Riboflavin-specific deaminase, C-terminal EP550_17775 IPR003796 Ribonucleotide reductase regulator NrdR-like EP550_17775 IPR005144 ATP-cone domain EP550_17780 IPR001905 Ammonium transporter EP550_17780 IPR029020 Ammonium/urea transporter EP550_17780 IPR024041 Ammonium transporter AmtB-like domain EP550_17780 IPR018047 Ammonium transporter, conserved site EP550_17785 IPR017918 Nitrogen regulatory protein PII, conserved site EP550_17785 IPR002332 Nitrogen regulatory protein P-II, urydylation site EP550_17785 IPR011322 Nitrogen regulatory PII-like, alpha/beta EP550_17785 IPR002187 Nitrogen regulatory protein PII EP550_17785 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal EP550_17795 IPR004482 Mg chelatase-related protein EP550_17795 IPR025158 Mg chelatase-related protein, C-terminal domain EP550_17795 IPR000523 Magnesium chelatase ChlI domain EP550_17795 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_17795 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_17795 IPR003593 AAA+ ATPase domain EP550_17805 IPR024165 Aminoglycoside 3-phosphotransferase EP550_17805 IPR011009 Protein kinase-like domain superfamily EP550_17805 IPR002575 Aminoglycoside phosphotransferase EP550_17810 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase EP550_17810 IPR011009 Protein kinase-like domain superfamily EP550_17835 IPR023772 DNA-binding HTH domain, TetR-type, conserved site EP550_17835 IPR009057 Homeobox-like domain superfamily EP550_17835 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP550_17835 IPR001647 DNA-binding HTH domain, TetR-type EP550_17835 IPR004111 Tetracycline repressor TetR, C-terminal EP550_17835 IPR003012 Tetracycline transcriptional regulator, TetR EP550_17840 IPR036259 MFS transporter superfamily EP550_17840 IPR005829 Sugar transporter, conserved site EP550_17840 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG EP550_17840 IPR011701 Major facilitator superfamily EP550_17840 IPR020846 Major facilitator superfamily domain EP550_17850 IPR011547 SLC26A/SulP transporter domain EP550_17850 IPR001902 SLC26A/SulP transporter EP550_17850 IPR002645 STAS domain EP550_17850 IPR036513 STAS domain superfamily EP550_17850 IPR018045 Sulphate anion transporter, conserved site EP550_17855 IPR006015 Universal stress protein A family EP550_17855 IPR006016 UspA EP550_17885 IPR036397 Ribonuclease H superfamily EP550_17885 IPR012337 Ribonuclease H-like superfamily EP550_17885 IPR001584 Integrase, catalytic core EP550_17895 IPR001208 MCM domain EP550_17895 IPR004482 Mg chelatase-related protein EP550_17895 IPR025158 Mg chelatase-related protein, C-terminal domain EP550_17895 IPR000523 Magnesium chelatase ChlI domain EP550_17895 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_17895 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_17895 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP550_17895 IPR003593 AAA+ ATPase domain EP550_17900 IPR015424 Pyridoxal phosphate-dependent transferase EP550_17900 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_17900 IPR036390 Winged helix DNA-binding domain superfamily EP550_17900 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_17900 IPR004839 Aminotransferase, class I/classII EP550_17900 IPR000524 Transcription regulator HTH, GntR EP550_17910 IPR020625 Schiff base-forming aldolase, active site EP550_17910 IPR002220 DapA-like EP550_17910 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA EP550_17910 IPR013785 Aldolase-type TIM barrel EP550_17910 IPR020624 Schiff base-forming aldolase, conserved site EP550_17925 IPR023614 Porin domain superfamily EP550_17925 IPR005318 Outer membrane porin, bacterial EP550_17930 IPR008162 Inorganic pyrophosphatase EP550_17930 IPR036649 Inorganic pyrophosphatase superfamily EP550_17945 IPR000873 AMP-dependent synthetase/ligase EP550_17945 IPR042099 AMP-dependent synthetase-like superfamily EP550_17945 IPR020845 AMP-binding, conserved site EP550_17945 IPR025110 AMP-binding enzyme, C-terminal domain EP550_17950 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily EP550_17950 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat EP550_17950 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal EP550_17950 IPR013760 DNA topoisomerase, type IIA-like domain superfamily EP550_17950 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal EP550_17950 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative EP550_17950 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta EP550_17955 IPR011701 Major facilitator superfamily EP550_17955 IPR005829 Sugar transporter, conserved site EP550_17955 IPR036259 MFS transporter superfamily EP550_17955 IPR020846 Major facilitator superfamily domain EP550_17960 IPR005115 Uncharacterised domain UPF0126 EP550_17965 IPR004027 SEC-C motif EP550_17965 IPR032710 NTF2-like domain superfamily EP550_17965 IPR023006 Uncharacterised protein family UPF0225 EP550_17970 IPR036318 FAD-binding, type PCMH-like superfamily EP550_17970 IPR000644 CBS domain EP550_17970 IPR016169 FAD-binding, type PCMH, subdomain 2 EP550_17970 IPR005496 Integral membrane protein TerC EP550_17970 IPR005170 Transporter-associated domain EP550_17975 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG EP550_17975 IPR031100 LOG family EP550_17980 IPR023721 Multidrug resistance protein MdtD EP550_17980 IPR036259 MFS transporter superfamily EP550_17980 IPR020846 Major facilitator superfamily domain EP550_17980 IPR011701 Major facilitator superfamily EP550_17980 IPR004638 Drug resistance transporter EmrB-like EP550_17990 IPR001126 UmuC domain EP550_17990 IPR017961 DNA polymerase, Y-family, little finger domain EP550_17990 IPR024728 DNA polymerase type-Y, HhH motif EP550_17990 IPR022880 DNA polymerase IV EP550_17990 IPR036775 DNA polymerase, Y-family, little finger domain superfamily EP550_18005 IPR022946 Uncharacterised protein family UPF0313 EP550_18005 IPR006638 Elp3/MiaB/NifB EP550_18005 IPR020612 Methylthiotransferase, conserved site EP550_18005 IPR007197 Radical SAM EP550_18005 IPR013704 Uncharacterised protein family UPF0313, N-terminal EP550_18005 IPR023404 Radical SAM, alpha/beta horseshoe EP550_18005 IPR024560 Uncharacterised protein family UPF0313, C-terminal EP550_18025 IPR008254 Flavodoxin/nitric oxide synthase EP550_18025 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic EP550_18025 IPR005025 NADPH-dependent FMN reductase-like EP550_18025 IPR010089 Flavoprotein WrbA-like EP550_18025 IPR029039 Flavoprotein-like superfamily EP550_18035 IPR005856 Cysteine synthase EP550_18035 IPR005859 Cysteine synthase CysK EP550_18035 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site EP550_18035 IPR001926 Pyridoxal-phosphate dependent enzyme EP550_18035 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme EP550_18070 IPR009057 Homeobox-like domain superfamily EP550_18070 IPR001647 DNA-binding HTH domain, TetR-type EP550_18070 IPR023772 DNA-binding HTH domain, TetR-type, conserved site EP550_18095 IPR023635 Peptide deformylase EP550_18095 IPR036821 Peptide deformylase superfamily EP550_18105 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_18105 IPR003488 DNA recombination-mediator protein A EP550_18105 IPR041614 DprA, winged helix domain EP550_18110 IPR023535 Threonylcarbamoyl-AMP synthase EP550_18110 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily EP550_18110 IPR006070 YrdC-like domain EP550_18115 IPR000620 EamA domain EP550_18120 IPR001647 DNA-binding HTH domain, TetR-type EP550_18120 IPR009057 Homeobox-like domain superfamily EP550_18120 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP550_18125 IPR011701 Major facilitator superfamily EP550_18125 IPR036259 MFS transporter superfamily EP550_18125 IPR020846 Major facilitator superfamily domain EP550_18135 IPR036249 Thioredoxin-like superfamily EP550_18135 IPR029760 Glutathione peroxidase conserved site EP550_18135 IPR000889 Glutathione peroxidase EP550_18135 IPR029759 Glutathione peroxidase active site EP550_18135 IPR033674 Thioredoxin/glutathione peroxidase BtuE EP550_18145 IPR022548 Domain of unknown function DUF2846 EP550_18145 IPR016596 Protein of unknown function UCP012335 EP550_18150 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal EP550_18150 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal EP550_18150 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily EP550_18150 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit EP550_18155 IPR003593 AAA+ ATPase domain EP550_18155 IPR005722 ATP synthase, F1 complex, beta subunit EP550_18155 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily EP550_18155 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain EP550_18155 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain EP550_18155 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal EP550_18155 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_18155 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site EP550_18160 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily EP550_18160 IPR000131 ATP synthase, F1 complex, gamma subunit EP550_18160 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site EP550_18165 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain EP550_18165 IPR000793 ATP synthase, alpha subunit, C-terminal EP550_18165 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily EP550_18165 IPR005294 ATP synthase, F1 complex, alpha subunit EP550_18165 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site EP550_18165 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain EP550_18165 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily EP550_18165 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain EP550_18165 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily EP550_18165 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_18170 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily EP550_18170 IPR000711 ATPase, OSCP/delta subunit EP550_18170 IPR020781 ATPase, OSCP/delta subunit, conserved site EP550_18175 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily EP550_18175 IPR005864 ATP synthase, F0 complex, subunit b, bacterial EP550_18175 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast EP550_18180 IPR000454 ATP synthase, F0 complex, subunit C EP550_18180 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site EP550_18180 IPR038662 F1F0 ATP synthase subunit C superfamily EP550_18180 IPR002379 V-ATPase proteolipid subunit C-like domain EP550_18180 IPR035921 F/V-ATP synthase subunit C superfamily EP550_18180 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast EP550_18185 IPR023011 ATP synthase, F0 complex, subunit A, active site EP550_18185 IPR000568 ATP synthase, F0 complex, subunit A EP550_18185 IPR035908 ATP synthase, F0 complex, subunit A superfamily EP550_18205 IPR017882 Zinc import ATP-binding protein ZnuC EP550_18205 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_18205 IPR017871 ABC transporter, conserved site EP550_18205 IPR003439 ABC transporter-like EP550_18205 IPR003593 AAA+ ATPase domain EP550_18210 IPR001626 ABC transporter, TroCD-like EP550_18210 IPR037294 ABC transporter, BtuC-like EP550_18215 IPR004778 Homoserine/Threonine efflux protein EP550_18215 IPR001123 Amino acid exporter protein, LeuE-type EP550_18220 IPR006314 Dyp-type peroxidase EP550_18220 IPR011008 Dimeric alpha-beta barrel EP550_18225 IPR012301 Malic enzyme, N-terminal domain EP550_18225 IPR023667 NAD-dependent malic enzyme, proteobacteria EP550_18225 IPR036291 NAD(P)-binding domain superfamily EP550_18225 IPR015884 Malic enzyme, conserved site EP550_18225 IPR012302 Malic enzyme, NAD-binding EP550_18225 IPR037062 Malic enzyme, N-terminal domain superfamily EP550_18225 IPR001891 Malic oxidoreductase EP550_18230 IPR001278 Arginine-tRNA ligase EP550_18230 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily EP550_18230 IPR008909 DALR anticodon binding EP550_18230 IPR005148 Arginyl tRNA synthetase N-terminal domain EP550_18230 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding EP550_18230 IPR035684 Arginyl-tRNA synthetase, catalytic core domain EP550_18250 IPR012093 Pirin EP550_18250 IPR008778 Pirin, C-terminal domain EP550_18250 IPR003829 Pirin, N-terminal domain EP550_18250 IPR014710 RmlC-like jelly roll fold EP550_18250 IPR011051 RmlC-like cupin domain superfamily EP550_18260 IPR005149 Transcription regulator PadR, N-terminal EP550_18260 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_18260 IPR036390 Winged helix DNA-binding domain superfamily EP550_18280 IPR025184 Domain of unknown function DUF4111 EP550_18280 IPR024172 Streptomycin 3''-adenylyltransferase EP550_18280 IPR002934 Polymerase, nucleotidyl transferase domain EP550_18285 IPR029062 Class I glutamine amidotransferase-like EP550_18285 IPR001674 GMP synthase, C-terminal EP550_18285 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_18285 IPR022310 NAD/GMP synthase EP550_18285 IPR025777 GMP synthetase ATP pyrophosphatase domain EP550_18285 IPR022955 GMP synthase EP550_18285 IPR004739 GMP synthase, glutamine amidotransferase EP550_18285 IPR017926 Glutamine amidotransferase EP550_18290 IPR007383 Protein of unknown function DUF445 EP550_18290 IPR016991 Protein of unknown function UCP032178 EP550_18295 IPR032808 DoxX family EP550_18300 IPR032816 SNARE associated Golgi protein EP550_18300 IPR032818 DedA family EP550_18315 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_18315 IPR025669 AAA domain EP550_18325 IPR036065 BolA-like superfamily EP550_18325 IPR002634 BolA protein EP550_18335 IPR004568 Phosphopantetheine-protein transferase domain EP550_18335 IPR037143 4'-phosphopantetheinyl transferase domain superfamily EP550_18335 IPR008278 4'-phosphopantetheinyl transferase domain EP550_18340 IPR036291 NAD(P)-binding domain superfamily EP550_18340 IPR016040 NAD(P)-binding domain EP550_18340 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_18340 IPR005888 dTDP-glucose 4,6-dehydratase EP550_18355 IPR009081 Phosphopantetheine binding ACP domain EP550_18355 IPR006162 Phosphopantetheine attachment site EP550_18355 IPR001031 Thioesterase EP550_18355 IPR020806 Polyketide synthase, phosphopantetheine-binding domain EP550_18355 IPR029058 Alpha/Beta hydrolase fold EP550_18355 IPR001242 Condensation domain EP550_18355 IPR010071 Amino acid adenylation domain EP550_18355 IPR042099 AMP-dependent synthetase-like superfamily EP550_18355 IPR036736 ACP-like superfamily EP550_18355 IPR025110 AMP-binding enzyme, C-terminal domain EP550_18355 IPR020845 AMP-binding, conserved site EP550_18355 IPR000873 AMP-dependent synthetase/ligase EP550_18355 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily EP550_18360 IPR016039 Thiolase-like EP550_18360 IPR029058 Alpha/Beta hydrolase fold EP550_18360 IPR036736 ACP-like superfamily EP550_18360 IPR018201 Beta-ketoacyl synthase, active site EP550_18360 IPR014031 Beta-ketoacyl synthase, C-terminal EP550_18360 IPR014030 Beta-ketoacyl synthase, N-terminal EP550_18360 IPR013217 Methyltransferase type 12 EP550_18360 IPR020615 Thiolase, acyl-enzyme intermediate active site EP550_18360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_18360 IPR032821 Ketoacyl-synthetase, C-terminal extension EP550_18360 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain EP550_18360 IPR020807 Polyketide synthase, dehydratase domain EP550_18360 IPR042104 Polyketide synthase, dehydratase domain superfamily EP550_18360 IPR020806 Polyketide synthase, phosphopantetheine-binding domain EP550_18360 IPR001031 Thioesterase EP550_18360 IPR006162 Phosphopantetheine attachment site EP550_18360 IPR009081 Phosphopantetheine binding ACP domain EP550_18365 IPR006089 Acyl-CoA dehydrogenase, conserved site EP550_18365 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_18365 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_18365 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_18365 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_18365 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_18365 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_18370 IPR000873 AMP-dependent synthetase/ligase EP550_18370 IPR042099 AMP-dependent synthetase-like superfamily EP550_18375 IPR000792 Transcription regulator LuxR, C-terminal EP550_18375 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_18375 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily EP550_18375 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain EP550_18375 IPR016032 Signal transduction response regulator, C-terminal effector EP550_18385 IPR016181 Acyl-CoA N-acyltransferase EP550_18385 IPR001690 Autoinducer synthase EP550_18390 IPR020846 Major facilitator superfamily domain EP550_18390 IPR005828 Major facilitator, sugar transporter-like EP550_18390 IPR036259 MFS transporter superfamily EP550_18390 IPR004736 MFS transporter, metabolite:H symporter EP550_18390 IPR005829 Sugar transporter, conserved site EP550_18390 IPR011701 Major facilitator superfamily EP550_18395 IPR001753 Enoyl-CoA hydratase/isomerase EP550_18395 IPR014748 Enoyl-CoA hydratase, C-terminal EP550_18395 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site EP550_18395 IPR029045 ClpP/crotonase-like domain superfamily EP550_18400 IPR029045 ClpP/crotonase-like domain superfamily EP550_18400 IPR014748 Enoyl-CoA hydratase, C-terminal EP550_18400 IPR001753 Enoyl-CoA hydratase/isomerase EP550_18400 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site EP550_18405 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal EP550_18405 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal EP550_18405 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain EP550_18405 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal EP550_18405 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily EP550_18405 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily EP550_18405 IPR006089 Acyl-CoA dehydrogenase, conserved site EP550_18410 IPR020845 AMP-binding, conserved site EP550_18410 IPR025110 AMP-binding enzyme, C-terminal domain EP550_18410 IPR042099 AMP-dependent synthetase-like superfamily EP550_18410 IPR000873 AMP-dependent synthetase/ligase EP550_18415 IPR036291 NAD(P)-binding domain superfamily EP550_18415 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain EP550_18415 IPR015815 3-hydroxyisobutyrate dehydrogenase-related EP550_18415 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding EP550_18415 IPR013328 6-phosphogluconate dehydrogenase, domain 2 EP550_18415 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP550_18415 IPR011548 3-hydroxyisobutyrate dehydrogenase EP550_18415 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site EP550_18420 IPR010061 Methylmalonate-semialdehyde dehydrogenase EP550_18420 IPR015590 Aldehyde dehydrogenase domain EP550_18420 IPR016162 Aldehyde dehydrogenase, N-terminal EP550_18420 IPR016160 Aldehyde dehydrogenase, cysteine active site EP550_18420 IPR016163 Aldehyde dehydrogenase, C-terminal EP550_18420 IPR016161 Aldehyde/histidinol dehydrogenase EP550_18430 IPR004840 Amino acid permease, conserved site EP550_18430 IPR004841 Amino acid permease/ SLC12A domain EP550_18435 IPR004840 Amino acid permease, conserved site EP550_18435 IPR004841 Amino acid permease/ SLC12A domain EP550_18440 IPR006175 YjgF/YER057c/UK114 family EP550_18440 IPR035959 RutC-like superfamily EP550_18440 IPR019897 RidA, conserved site EP550_18440 IPR035709 RutC family, YoaB-like EP550_18445 IPR000821 Alanine racemase EP550_18445 IPR001608 Alanine racemase, N-terminal EP550_18445 IPR011079 Alanine racemase, C-terminal EP550_18445 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site EP550_18445 IPR029066 PLP-binding barrel EP550_18445 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal EP550_18450 IPR036188 FAD/NAD(P)-binding domain superfamily EP550_18450 IPR006076 FAD dependent oxidoreductase EP550_18450 IPR023080 D-amino acid dehydrogenase DadA EP550_18455 IPR011991 ArsR-like helix-turn-helix domain EP550_18455 IPR000485 AsnC-type HTH domain EP550_18455 IPR011008 Dimeric alpha-beta barrel EP550_18455 IPR019885 Transcription regulator HTH, AsnC-type, conserved site EP550_18455 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_18455 IPR036390 Winged helix DNA-binding domain superfamily EP550_18455 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain EP550_18455 IPR019888 Transcription regulator AsnC-type EP550_18465 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily EP550_18465 IPR010105 TonB-dependent siderophore receptor EP550_18465 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_18465 IPR039423 TonB-dependent receptor-like EP550_18465 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_18465 IPR012910 TonB-dependent receptor, plug domain EP550_18480 IPR006225 Pseudouridine synthase, RluC/RluD EP550_18480 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site EP550_18480 IPR020103 Pseudouridine synthase, catalytic domain superfamily EP550_18480 IPR006145 Pseudouridine synthase, RsuA/RluA EP550_18530 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent EP550_18530 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 EP550_18530 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel EP550_18530 IPR006249 Aconitase/Iron-responsive element-binding protein 2 EP550_18530 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain EP550_18530 IPR036008 Aconitase, iron-sulfur domain EP550_18530 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain EP550_18535 IPR011278 2-methylcitrate synthase/citrate synthase type I EP550_18535 IPR019810 Citrate synthase active site EP550_18535 IPR016142 Citrate synthase-like, large alpha subdomain EP550_18535 IPR036969 Citrate synthase superfamily EP550_18535 IPR016143 Citrate synthase-like, small alpha subdomain EP550_18535 IPR002020 Citrate synthase EP550_18535 IPR024176 Citrate synthase, bacterial-type EP550_18540 IPR040442 Pyruvate kinase-like domain superfamily EP550_18540 IPR039556 ICL/PEPM domain EP550_18540 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site EP550_18540 IPR012695 2-methylisocitrate lyase EP550_18540 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily EP550_18545 IPR036390 Winged helix DNA-binding domain superfamily EP550_18545 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_18545 IPR008920 Transcription regulator FadR/GntR, C-terminal EP550_18545 IPR000485 AsnC-type HTH domain EP550_18545 IPR011711 GntR, C-terminal EP550_18545 IPR000524 Transcription regulator HTH, GntR EP550_18555 IPR015424 Pyridoxal phosphate-dependent transferase EP550_18555 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_18555 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_18555 IPR004839 Aminotransferase, class I/classII EP550_18555 IPR000796 Aspartate/other aminotransferase EP550_18555 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site EP550_18560 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal EP550_18560 IPR016164 FAD-linked oxidase-like, C-terminal EP550_18560 IPR016169 FAD-binding, type PCMH, subdomain 2 EP550_18560 IPR016167 FAD-binding, type PCMH, subdomain 1 EP550_18560 IPR036318 FAD-binding, type PCMH-like superfamily EP550_18560 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 EP550_18560 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 EP550_18560 IPR012256 D-lactate dehydrogenase EP550_18560 IPR016166 FAD-binding domain, PCMH-type EP550_18560 IPR006094 FAD linked oxidase, N-terminal EP550_18565 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent EP550_18565 IPR000262 FMN-dependent dehydrogenase EP550_18565 IPR037396 FMN hydroxy acid dehydrogenase domain EP550_18565 IPR020920 L-lactate dehydrogenase, bacterial EP550_18565 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site EP550_18565 IPR013785 Aldolase-type TIM barrel EP550_18570 IPR011711 GntR, C-terminal EP550_18570 IPR008920 Transcription regulator FadR/GntR, C-terminal EP550_18570 IPR000524 Transcription regulator HTH, GntR EP550_18570 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_18570 IPR036390 Winged helix DNA-binding domain superfamily EP550_18575 IPR003804 L-lactate permease EP550_18580 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I EP550_18580 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II EP550_18580 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III EP550_18580 IPR005843 Alpha-D-phosphohexomutase, C-terminal EP550_18580 IPR005841 Alpha-D-phosphohexomutase superfamily EP550_18580 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily EP550_18580 IPR016066 Alpha-D-phosphohexomutase, conserved site EP550_18580 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III EP550_18590 IPR016040 NAD(P)-binding domain EP550_18590 IPR005886 UDP-glucose 4-epimerase EP550_18590 IPR036291 NAD(P)-binding domain superfamily EP550_18595 IPR001672 Phosphoglucose isomerase (PGI) EP550_18595 IPR023096 Phosphoglucose isomerase, C-terminal EP550_18595 IPR018189 Phosphoglucose isomerase, conserved site EP550_18595 IPR035476 Phosphoglucose isomerase, SIS domain 1 EP550_18595 IPR035482 Phosphoglucose isomerase, SIS domain 2 EP550_18600 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type EP550_18600 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation EP550_18600 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal EP550_18600 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal EP550_18600 IPR017476 UDP-glucose/GDP-mannose dehydrogenase EP550_18600 IPR036291 NAD(P)-binding domain superfamily EP550_18600 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP550_18600 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily EP550_18605 IPR029044 Nucleotide-diphospho-sugar transferases EP550_18605 IPR005835 Nucleotidyl transferase domain EP550_18605 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type EP550_18610 IPR003362 Bacterial sugar transferase EP550_18615 IPR029044 Nucleotide-diphospho-sugar transferases EP550_18615 IPR001173 Glycosyltransferase 2-like EP550_18620 IPR001296 Glycosyl transferase, family 1 EP550_18635 IPR017814 Mycothiol biosynthesis protein, MshA EP550_18635 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain EP550_18635 IPR001296 Glycosyl transferase, family 1 EP550_18640 IPR011004 Trimeric LpxA-like superfamily EP550_18640 IPR001451 Hexapeptide repeat EP550_18640 IPR024688 Maltose/galactoside acetyltransferase EP550_18640 IPR039369 Galactoside O-acetyltransferase LacA-like EP550_18650 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase EP550_18650 IPR015424 Pyridoxal phosphate-dependent transferase EP550_18650 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 EP550_18650 IPR015421 Pyridoxal phosphate-dependent transferase, major domain EP550_18655 IPR001451 Hexapeptide repeat EP550_18655 IPR011004 Trimeric LpxA-like superfamily EP550_18660 IPR004104 Oxidoreductase, C-terminal EP550_18660 IPR036291 NAD(P)-binding domain superfamily EP550_18660 IPR000683 Oxidoreductase, N-terminal EP550_18665 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily EP550_18665 IPR036291 NAD(P)-binding domain superfamily EP550_18665 IPR017476 UDP-glucose/GDP-mannose dehydrogenase EP550_18665 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal EP550_18665 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily EP550_18665 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase EP550_18665 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal EP550_18665 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation EP550_18670 IPR003715 Polysaccharide export protein EP550_18670 IPR019554 Soluble ligand binding domain EP550_18670 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain EP550_18675 IPR023485 Phosphotyrosine protein phosphatase I EP550_18675 IPR017867 Protein-tyrosine phosphatase, low molecular weight EP550_18675 IPR036196 Phosphotyrosine protein phosphatase I superfamily EP550_18680 IPR025669 AAA domain EP550_18680 IPR005702 Exopolysaccharide synthesis protein EP550_18680 IPR032807 Tyrosine kinase, G-rich domain EP550_18680 IPR003856 Polysaccharide chain length determinant N-terminal domain EP550_18680 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_18685 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily EP550_18685 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal EP550_18685 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain EP550_18685 IPR008104 Macrophage infectivity potentiator EP550_18690 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily EP550_18690 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain EP550_18690 IPR008104 Macrophage infectivity potentiator EP550_18690 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal EP550_18695 IPR004268 Peptidoglycan biosynthesis protein MurJ EP550_18700 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily EP550_18700 IPR002502 N-acetylmuramoyl-L-alanine amidase domain EP550_18705 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal EP550_18705 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD EP550_18705 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal EP550_18705 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal EP550_18705 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily EP550_18705 IPR013785 Aldolase-type TIM barrel EP550_18705 IPR004393 Nicotinate-nucleotide pyrophosphorylase EP550_18715 IPR017767 Bacterial phospholipase C, phosphocholine-specific EP550_18715 IPR007312 Phosphoesterase EP550_18715 IPR008475 Bacterial phospholipase C, C-terminal domain EP550_18715 IPR017850 Alkaline-phosphatase-like, core domain superfamily EP550_18715 IPR006311 Twin-arginine translocation pathway, signal sequence EP550_18720 IPR002381 Ribonuclease PH, bacterial-type EP550_18720 IPR018336 Ribonuclease PH, conserved site EP550_18720 IPR027408 PNPase/RNase PH domain superfamily EP550_18720 IPR036345 Exoribonuclease, PH domain 2 superfamily EP550_18720 IPR015847 Exoribonuclease, phosphorolytic domain 2 EP550_18720 IPR001247 Exoribonuclease, phosphorolytic domain 1 EP550_18720 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_18725 IPR005804 Fatty acid desaturase domain EP550_18730 IPR001433 Oxidoreductase FAD/NAD(P)-binding EP550_18730 IPR017938 Riboflavin synthase-like beta-barrel EP550_18730 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain EP550_18735 IPR023764 Transcriptional repressor HTH, FabR EP550_18735 IPR001647 DNA-binding HTH domain, TetR-type EP550_18735 IPR009057 Homeobox-like domain superfamily EP550_18740 IPR013571 Transcription regulator QacR, C-terminal EP550_18740 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP550_18740 IPR009057 Homeobox-like domain superfamily EP550_18740 IPR001647 DNA-binding HTH domain, TetR-type EP550_18740 IPR023772 DNA-binding HTH domain, TetR-type, conserved site EP550_18745 IPR017937 Thioredoxin, conserved site EP550_18745 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL EP550_18745 IPR001853 DSBA-like thioredoxin domain EP550_18745 IPR036249 Thioredoxin-like superfamily EP550_18745 IPR013766 Thioredoxin domain EP550_18750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase EP550_18750 IPR010233 Ubiquinone biosynthesis O-methyltransferase EP550_18755 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic EP550_18755 IPR006439 HAD hydrolase, subfamily IA EP550_18755 IPR041492 Haloacid dehalogenase-like hydrolase EP550_18755 IPR023198 Phosphoglycolate phosphatase-like, domain 2 EP550_18755 IPR023214 HAD superfamily EP550_18755 IPR036412 HAD-like superfamily EP550_18760 IPR036291 NAD(P)-binding domain superfamily EP550_18760 IPR020904 Short-chain dehydrogenase/reductase, conserved site EP550_18760 IPR002347 Short-chain dehydrogenase/reductase SDR EP550_18775 IPR016181 Acyl-CoA N-acyltransferase EP550_18775 IPR036393 Acetylglutamate kinase-like superfamily EP550_18775 IPR010167 Amino-acid N-acetyltransferase EP550_18775 IPR033719 N-acetylglutamate synthase, kinase-like domain EP550_18775 IPR001048 Aspartate/glutamate/uridylate kinase EP550_18775 IPR000182 GNAT domain EP550_18780 IPR015168 SsuA/THI5-like EP550_18780 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP550_18780 IPR010067 Aliphatic sulfonates-binding protein EP550_18785 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF EP550_18785 IPR015168 SsuA/THI5-like EP550_18785 IPR010067 Aliphatic sulfonates-binding protein EP550_18790 IPR036661 Luciferase-like domain superfamily EP550_18790 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent EP550_18790 IPR011251 Luciferase-like domain EP550_18795 IPR035906 MetI-like superfamily EP550_18795 IPR000515 ABC transporter type 1, transmembrane domain MetI-like EP550_18800 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_18800 IPR003439 ABC transporter-like EP550_18800 IPR003593 AAA+ ATPase domain EP550_18800 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB EP550_18805 IPR001647 DNA-binding HTH domain, TetR-type EP550_18805 IPR009057 Homeobox-like domain superfamily EP550_18805 IPR019915 Transcription regulator, pyrimidine utilisation, RutR EP550_18805 IPR013573 Transcription regulator YcdC, C-terminal EP550_18805 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily EP550_18810 IPR010049 MTA/SAH nucleosidase EP550_18810 IPR000845 Nucleoside phosphorylase domain EP550_18810 IPR035994 Nucleoside phosphorylase superfamily EP550_18820 IPR015864 FAD synthetase EP550_18820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_18820 IPR023465 Riboflavin kinase domain superfamily EP550_18820 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic EP550_18820 IPR002606 Riboflavin kinase, bacterial EP550_18820 IPR023468 Riboflavin kinase EP550_18825 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding EP550_18825 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain EP550_18825 IPR010663 Zinc finger, FPG/IleRS-type EP550_18825 IPR023585 Isoleucine-tRNA ligase, type 1 EP550_18825 IPR002301 Isoleucine-tRNA ligase EP550_18825 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain EP550_18825 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding EP550_18825 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold EP550_18825 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site EP550_18825 IPR002300 Aminoacyl-tRNA synthetase, class Ia EP550_18830 IPR001872 Peptidase A8, signal peptidase II EP550_18835 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain EP550_18875 IPR029000 Cyclophilin-like domain superfamily EP550_18875 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site EP550_18875 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain EP550_18880 IPR029058 Alpha/Beta hydrolase fold EP550_18880 IPR013094 Alpha/beta hydrolase fold-3 EP550_18905 IPR000740 GrpE nucleotide exchange factor EP550_18905 IPR013805 GrpE nucleotide exchange factor, coiled-coil EP550_18905 IPR009012 GrpE nucleotide exchange factor, head EP550_18910 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily EP550_18910 IPR018181 Heat shock protein 70, conserved site EP550_18910 IPR012725 Chaperone DnaK EP550_18910 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily EP550_18910 IPR013126 Heat shock protein 70 family EP550_18930 IPR031304 Transglycosylase SLT domain 2 EP550_18930 IPR023346 Lysozyme-like domain superfamily EP550_18930 IPR011757 Lytic transglycosylase MltB EP550_18935 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain EP550_18935 IPR011761 ATP-grasp fold EP550_18935 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit EP550_18935 IPR011054 Rudiment single hybrid motif EP550_18935 IPR016185 Pre-ATP-grasp domain superfamily EP550_18935 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type EP550_18935 IPR013815 ATP-grasp fold, subdomain 1 EP550_18940 IPR024694 PurE, prokaryotic type EP550_18940 IPR000031 PurE domain EP550_18940 IPR033747 Class I PurE EP550_18940 IPR035893 PurE domain superfamily EP550_18955 IPR005757 Murein peptide ligase EP550_18955 IPR036565 Mur-like, catalytic domain superfamily EP550_18955 IPR004101 Mur ligase, C-terminal EP550_18955 IPR036615 Mur ligase, C-terminal domain superfamily EP550_18955 IPR013221 Mur ligase, central EP550_18955 IPR000713 Mur ligase, N-terminal catalytic domain EP550_18965 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase EP550_18965 IPR033879 Undecaprenyl-diphosphatase EP550_18965 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily EP550_18970 IPR005496 Integral membrane protein TerC EP550_18970 IPR022369 Integral membrane protein TerC, riboswitch-linked EP550_18980 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain EP550_18980 IPR016185 Pre-ATP-grasp domain superfamily EP550_18985 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily EP550_18985 IPR017941 Rieske [2Fe-2S] iron-sulphur domain EP550_18985 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site EP550_18990 IPR032466 Metal-dependent hydrolase EP550_18990 IPR006680 Amidohydrolase-related EP550_18990 IPR014311 Guanine deaminase EP550_18990 IPR011059 Metal-dependent hydrolase, composite domain superfamily EP550_18995 IPR000836 Phosphoribosyltransferase domain EP550_18995 IPR005904 Hypoxanthine phosphoribosyl transferase EP550_18995 IPR029057 Phosphoribosyltransferase-like EP550_19010 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily EP550_19010 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal EP550_19010 IPR036249 Thioredoxin-like superfamily EP550_19010 IPR017937 Thioredoxin, conserved site EP550_19010 IPR012336 Thioredoxin-like fold EP550_19010 IPR033954 Disulphide bond isomerase, DsbC/G EP550_19015 IPR036837 Cation efflux protein, cytoplasmic domain superfamily EP550_19015 IPR027469 Cation efflux transmembrane domain superfamily EP550_19015 IPR027470 Cation efflux protein, cytoplasmic domain EP550_19015 IPR002524 Cation efflux protein EP550_19020 IPR038390 Metal-sensitive transcriptional repressor superfamily EP550_19020 IPR003735 Metal-sensitive transcriptional repressor EP550_19025 IPR031168 TrmE-type guanine nucleotide-binding domain EP550_19025 IPR027368 tRNA modification GTPase MnmE domain 2 EP550_19025 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 EP550_19025 IPR025867 MnmE, helical domain EP550_19025 IPR027417 P-loop containing nucleoside triphosphate hydrolase EP550_19025 IPR006073 GTP binding domain EP550_19025 IPR004520 tRNA modification GTPase MnmE EP550_19025 IPR018948 GTP-binding protein TrmE, N-terminal EP550_19025 IPR005225 Small GTP-binding protein domain EP550_19030 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 EP550_19030 IPR028053 Membrane insertase YidC, N-terminal EP550_19030 IPR028055 Membrane insertase YidC/Oxa1, C-terminal EP550_19030 IPR038221 YidC, periplasmic domain superfamily EP550_19030 IPR038210 Membrane insertase YidC, periplasmic domain EP550_19030 IPR019998 Membrane insertase YidC EP550_19035 IPR002696 Putative membrane protein insertion efficiency factor EP550_19040 IPR020539 Ribonuclease P, conserved site EP550_19040 IPR000100 Ribonuclease P EP550_19040 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup EP550_19040 IPR020568 Ribosomal protein S5 domain 2-type fold EP550_19045 IPR020939 Ribosomal protein L34, conserved site EP550_19045 IPR000271 Ribosomal protein L34 EP550_19050 IPR000525 Initiator Rep protein EP550_19050 IPR036388 Winged helix-like DNA-binding domain superfamily EP550_19050 IPR036390 Winged helix DNA-binding domain superfamily EP550_19075 IPR000531 TonB-dependent receptor-like, beta-barrel EP550_19075 IPR037066 TonB-dependent receptor, plug domain superfamily EP550_19075 IPR012910 TonB-dependent receptor, plug domain EP550_19075 IPR039426 Vitamin B12 transporter BtuB-like EP550_19085 IPR001584 Integrase, catalytic core EP550_19085 IPR001598 Transposase, IS30, conserved site EP550_19085 IPR036397 Ribonuclease H superfamily EP550_19085 IPR012337 Ribonuclease H-like superfamily EP550_19085 IPR025246 Transposase IS30-like HTH domain EP550_19090 IPR002575 Aminoglycoside phosphotransferase EP550_19090 IPR024165 Aminoglycoside 3-phosphotransferase EP550_19090 IPR011009 Protein kinase-like domain superfamily EP550_19095 IPR001598 Transposase, IS30, conserved site EP550_19095 IPR036397 Ribonuclease H superfamily EP550_19095 IPR012337 Ribonuclease H-like superfamily EP550_19095 IPR025246 Transposase IS30-like HTH domain EP550_19095 IPR001584 Integrase, catalytic core