BL01_00015 SM00530 Helix-turn-helix XRE-family like proteins BL01_00345 SM01040 BRO family, N-terminal domain BL01_00445 SM01264 BL01_00445 BL01_00485 SM00859 Semialdehyde dehydrogenase, NAD binding domain BL01_00500 SM00382 ATPases associated with a variety of cellular activities BL01_00500 SM01086 C-terminal, D2-small domain, of ClpB protein BL01_00565 SM01192 BL01_00565 BL01_00565 SM01193 BL01_00565 BL01_00585 SM00882 Coenzyme A transferase BL01_00590 SM00882 Coenzyme A transferase BL01_00600 SM00998 Adenylosuccinate lyase C-terminus BL01_00635 SM00710 Parallel beta-helix repeats BL01_00645 SM00564 beta-propeller repeat BL01_00665 SM00849 Metallo-beta-lactamase superfamily BL01_00670 SM00346 helix_turn_helix isocitrate lyase regulation BL01_00690 SM00855 Phosphoglycerate mutase family BL01_00715 SM00347 helix_turn_helix multiple antibiotic resistance protein BL01_00760 SM00903 Flavin reductase like domain BL01_00765 SM00342 helix_turn_helix, arabinose operon control protein BL01_00800 SM00882 Coenzyme A transferase BL01_00805 SM00882 Coenzyme A transferase BL01_00820 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BL01_00835 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_00835 SM00895 BL01_00835 BL01_00920 SM00342 helix_turn_helix, arabinose operon control protein BL01_00940 SM00382 ATPases associated with a variety of cellular activities BL01_00990 SM00382 ATPases associated with a variety of cellular activities BL01_01015 SM00919 Malic enzyme, NAD binding domain BL01_01015 SM01274 BL01_01015 BL01_01020 SM00836 DALR anticodon binding domain BL01_01020 SM01016 Arginyl tRNA synthetase N terminal dom BL01_01135 SM00823 Phosphopantetheine attachment site BL01_01135 SM00824 Thioesterase BL01_01145 SM00823 Phosphopantetheine attachment site BL01_01145 SM01294 BL01_01145 BL01_01160 SM00421 helix_turn_helix, Lux Regulon BL01_01230 SM01005 Alanine racemase, C-terminal domain BL01_01240 SM00344 helix_turn_helix ASNC type BL01_01290 SM00825 Beta-ketoacyl synthase BL01_01340 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_01340 SM00895 BL01_01340 BL01_01360 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_01360 SM00895 BL01_01360 BL01_01385 SM00984 UDP binding domain BL01_01450 SM00984 UDP binding domain BL01_01460 SM00226 Low molecular weight phosphatase family BL01_01485 SM00644 BL01_01485 BL01_01570 SM00062 Bacterial periplasmic substrate-binding proteins BL01_01575 SM00062 Bacterial periplasmic substrate-binding proteins BL01_01590 SM00382 ATPases associated with a variety of cellular activities BL01_01610 SM00904 Riboflavin kinase BL01_01635 SM00248 ankyrin repeats BL01_01680 SM00843 BL01_01680 BL01_01735 SM00829 Enoylreductase BL01_01765 SM00155 Phospholipase D. Active site motifs. BL01_01790 SM00729 Elongator protein 3, MiaB family, Radical SAM BL01_01835 SM00382 ATPases associated with a variety of cellular activities BL01_01870 SM00342 helix_turn_helix, arabinose operon control protein BL01_01880 SM00903 Flavin reductase like domain BL01_01905 SM00342 helix_turn_helix, arabinose operon control protein BL01_01930 SM01060 BL01_01930 BL01_01945 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_01945 SM00895 BL01_01945 BL01_01960 SM00903 Flavin reductase like domain BL01_02010 SM00346 helix_turn_helix isocitrate lyase regulation BL01_02020 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_02020 SM00866 BL01_02020 BL01_02030 SM00382 ATPases associated with a variety of cellular activities BL01_02075 SM00346 helix_turn_helix isocitrate lyase regulation BL01_02095 SM00346 helix_turn_helix isocitrate lyase regulation BL01_02130 SM00882 Coenzyme A transferase BL01_02135 SM00882 Coenzyme A transferase BL01_02180 SM00878 Biotin carboxylase C-terminal domain BL01_02265 SM01236 BL01_02265 BL01_02270 SM01060 BL01_02270 BL01_02285 SM00384 DNA binding domain with preference for A/T rich regions BL01_02305 SM00344 helix_turn_helix ASNC type BL01_02315 SM00387 Histidine kinase-like ATPases BL01_02315 SM00388 His Kinase A (phosphoacceptor) domain BL01_02315 SM00448 cheY-homologous receiver domain BL01_02320 SM00421 helix_turn_helix, Lux Regulon BL01_02320 SM00448 cheY-homologous receiver domain BL01_02340 SM00382 ATPases associated with a variety of cellular activities BL01_02345 SM00062 Bacterial periplasmic substrate-binding proteins BL01_02350 SM00062 Bacterial periplasmic substrate-binding proteins BL01_02380 SM00450 Rhodanese Homology Domain BL01_02385 SM00822 BL01_02385 BL01_02425 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_02480 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BL01_02500 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_02545 SM00062 Bacterial periplasmic substrate-binding proteins BL01_02550 SM00382 ATPases associated with a variety of cellular activities BL01_02575 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_02575 SM00895 BL01_02575 BL01_02605 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BL01_02655 SM00481 DNA polymerase alpha chain like domain BL01_02660 SM00870 BL01_02660 BL01_02685 SM00342 helix_turn_helix, arabinose operon control protein BL01_02700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BL01_02735 SM00100 Cyclic nucleotide-monophosphate binding domain BL01_02735 SM00419 helix_turn_helix, cAMP Regulatory protein BL01_02755 SM00382 ATPases associated with a variety of cellular activities BL01_02755 SM00930 BL01_02755 BL01_02810 SM00363 S4 RNA-binding domain BL01_02815 SM00316 Ribosomal protein S1-like RNA-binding domain BL01_02845 SM00729 Elongator protein 3, MiaB family, Radical SAM BL01_02910 SM00849 Metallo-beta-lactamase superfamily BL01_02945 SM00116 Domain in cystathionine beta-synthase and other proteins. BL01_02945 SM01091 Transporter associated domain BL01_02975 SM00487 DEAD-like helicases superfamily BL01_02975 SM00490 helicase superfamily c-terminal domain BL01_02995 SM00271 DnaJ molecular chaperone homology domain BL01_03010 SM00316 Ribosomal protein S1-like RNA-binding domain BL01_03010 SM00322 K homology RNA-binding domain BL01_03015 SM01387 BL01_03015 BL01_03025 SM00382 ATPases associated with a variety of cellular activities BL01_03130 SM00316 Ribosomal protein S1-like RNA-binding domain BL01_03190 SM00967 RNA 2'-O ribose methyltransferase substrate binding BL01_03215 SM00732 Likely ribonuclease with RNase H fold. BL01_03235 SM00346 helix_turn_helix isocitrate lyase regulation BL01_03245 SM00342 helix_turn_helix, arabinose operon control protein BL01_03260 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BL01_03260 SM00465 GIY-YIG type nucleases (URI domain) BL01_03310 SM00422 helix_turn_helix, mercury resistance BL01_03335 SM00387 Histidine kinase-like ATPases BL01_03375 SM00663 RNA polymerase I subunit A N-terminus BL01_03400 SM00649 Ribosomal protein L11/L12 BL01_03405 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BL01_03405 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BL01_03450 SM00226 Low molecular weight phosphatase family BL01_03485 SM01236 BL01_03485 BL01_03550 SM00530 Helix-turn-helix XRE-family like proteins BL01_03575 SM00316 Ribosomal protein S1-like RNA-binding domain BL01_03575 SM00955 BL01_03575 BL01_03645 SM00662 RNA polymerases D BL01_03650 SM00363 S4 RNA-binding domain BL01_03650 SM01390 BL01_03650 BL01_03715 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BL01_03720 SM01374 BL01_03720 BL01_03740 SM00322 K homology RNA-binding domain BL01_03755 SM01382 BL01_03755 BL01_03755 SM01383 BL01_03755 BL01_03775 SM01403 BL01_03775 BL01_03825 SM00563 Phosphate acyltransferases BL01_03840 SM00487 DEAD-like helicases superfamily BL01_03840 SM00490 helicase superfamily c-terminal domain BL01_03885 SM00382 ATPases associated with a variety of cellular activities BL01_03895 SM00487 DEAD-like helicases superfamily BL01_03895 SM00490 helicase superfamily c-terminal domain BL01_03905 SM00861 Transketolase, pyrimidine binding domain BL01_03945 SM00116 Domain in cystathionine beta-synthase and other proteins. BL01_04045 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BL01_04090 SM00382 ATPases associated with a variety of cellular activities BL01_04090 SM00962 SRP54-type protein, GTPase domain BL01_04090 SM00963 SRP54-type protein, helical bundle domain BL01_04120 SM00116 Domain in cystathionine beta-synthase and other proteins. BL01_04200 SM00347 helix_turn_helix multiple antibiotic resistance protein BL01_04210 SM00052 Putative diguanylate phosphodiesterase BL01_04210 SM00091 PAS domain BL01_04210 SM00267 diguanylate cyclase BL01_04255 SM00344 helix_turn_helix ASNC type BL01_04285 SM00363 S4 RNA-binding domain BL01_04290 SM00382 ATPases associated with a variety of cellular activities BL01_04320 SM00935 Outer membrane protein (OmpH-like) BL01_04330 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BL01_04360 SM00729 Elongator protein 3, MiaB family, Radical SAM BL01_04365 SM00091 PAS domain BL01_04365 SM00387 Histidine kinase-like ATPases BL01_04365 SM00388 His Kinase A (phosphoacceptor) domain BL01_04370 SM00382 ATPases associated with a variety of cellular activities BL01_04370 SM00448 cheY-homologous receiver domain BL01_04455 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_04465 SM00852 Probable molybdopterin binding domain BL01_04470 SM00852 Probable molybdopterin binding domain BL01_04485 SM00729 Elongator protein 3, MiaB family, Radical SAM BL01_04490 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BL01_04500 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BL01_04520 SM00448 cheY-homologous receiver domain BL01_04520 SM01012 BL01_04520 BL01_04545 SM00878 Biotin carboxylase C-terminal domain BL01_04590 SM00062 Bacterial periplasmic substrate-binding proteins BL01_04605 SM00382 ATPases associated with a variety of cellular activities BL01_04615 SM00344 helix_turn_helix ASNC type BL01_04625 SM00563 Phosphate acyltransferases BL01_04680 SM00382 ATPases associated with a variety of cellular activities BL01_04685 SM00382 ATPases associated with a variety of cellular activities BL01_04730 SM00382 ATPases associated with a variety of cellular activities BL01_04800 SM00829 Enoylreductase BL01_04805 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BL01_04945 SM00841 Elongation factor P, C-terminal BL01_04945 SM01185 BL01_04945 BL01_04960 SM00052 Putative diguanylate phosphodiesterase BL01_04995 SM00257 Lysin motif BL01_05015 SM00936 Penicillin-binding protein 5, C-terminal domain BL01_05070 SM00881 CoA binding domain BL01_05090 SM00861 Transketolase, pyrimidine binding domain BL01_05125 SM00450 Rhodanese Homology Domain BL01_05240 SM00014 Acid phosphatase homologues BL01_05275 SM00822 BL01_05275 BL01_05320 SM00387 Histidine kinase-like ATPases BL01_05320 SM00388 His Kinase A (phosphoacceptor) domain BL01_05325 SM00448 cheY-homologous receiver domain BL01_05325 SM00862 Transcriptional regulatory protein, C terminal BL01_05350 SM00563 Phosphate acyltransferases BL01_05365 SM00244 prohibitin homologues BL01_05400 SM00829 Enoylreductase BL01_05405 SM00342 helix_turn_helix, arabinose operon control protein BL01_05425 SM00342 helix_turn_helix, arabinose operon control protein BL01_05465 SM00316 Ribosomal protein S1-like RNA-binding domain BL01_05500 SM00845 GatB domain BL01_05515 SM00854 Bacterial capsule synthesis protein PGA_cap BL01_05545 SM00851 MGS-like domain BL01_05545 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BL01_05550 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BL01_05565 SM01103 BL01_05565 BL01_05575 SM00382 ATPases associated with a variety of cellular activities BL01_05650 SM00046 Diacylglycerol kinase catalytic domain (presumed) BL01_05665 SM00883 Chaperonin 10 Kd subunit BL01_05680 SM00849 Metallo-beta-lactamase superfamily BL01_05810 SM00978 BL01_05810 BL01_05815 SM00382 ATPases associated with a variety of cellular activities BL01_05850 SM00893 Electron transfer flavoprotein domain BL01_05855 SM00893 Electron transfer flavoprotein domain BL01_05860 SM00434 DNA Topoisomerase IV BL01_05930 SM00382 ATPases associated with a variety of cellular activities BL01_05935 SM00849 Metallo-beta-lactamase superfamily BL01_06050 SM00382 ATPases associated with a variety of cellular activities BL01_06055 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BL01_06060 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BL01_06065 SM01211 BL01_06065 BL01_06140 SM00382 ATPases associated with a variety of cellular activities BL01_06190 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BL01_06200 SM00838 Elongation factor G C-terminus BL01_06215 SM00358 Double-stranded RNA binding motif BL01_06215 SM00535 Ribonuclease III family BL01_06280 SM00267 diguanylate cyclase BL01_06290 SM00487 DEAD-like helicases superfamily BL01_06290 SM00490 helicase superfamily c-terminal domain BL01_06305 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BL01_06325 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BL01_06425 SM01329 BL01_06425 BL01_06475 SM00880 BL01_06475 BL01_06475 SM01118 BL01_06475 BL01_06505 SM00487 DEAD-like helicases superfamily BL01_06505 SM00490 helicase superfamily c-terminal domain BL01_06560 SM00344 helix_turn_helix ASNC type BL01_06590 SM00382 ATPases associated with a variety of cellular activities BL01_06690 SM00271 DnaJ molecular chaperone homology domain BL01_06730 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_06735 SM00829 Enoylreductase BL01_06755 SM00478 endonuclease III BL01_06755 SM00525 BL01_06755 BL01_06785 SM00382 ATPases associated with a variety of cellular activities BL01_06815 SM01130 BL01_06815 BL01_06845 SM00346 helix_turn_helix isocitrate lyase regulation BL01_06875 SM00833 Cobalamin synthesis protein cobW C-terminal domain BL01_06885 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_06885 SM00866 BL01_06885 BL01_07000 SM00450 Rhodanese Homology Domain BL01_07030 SM00387 Histidine kinase-like ATPases BL01_07030 SM00388 His Kinase A (phosphoacceptor) domain BL01_07035 SM00448 cheY-homologous receiver domain BL01_07035 SM00862 Transcriptional regulatory protein, C terminal BL01_07090 SM00257 Lysin motif BL01_07110 SM00387 Histidine kinase-like ATPases BL01_07110 SM00433 TopoisomeraseII BL01_07185 SM00267 diguanylate cyclase BL01_07250 SM00842 Cell division protein FtsA BL01_07255 SM00864 Tubulin/FtsZ family, GTPase domain BL01_07255 SM00865 Tubulin/FtsZ family, C-terminal domain BL01_07300 SM00849 Metallo-beta-lactamase superfamily BL01_07310 SM00116 Domain in cystathionine beta-synthase and other proteins. BL01_07310 SM01240 BL01_07310 BL01_07335 SM00937 BL01_07335 BL01_07340 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BL01_07380 SM00344 helix_turn_helix ASNC type BL01_07405 SM00387 Histidine kinase-like ATPases BL01_07435 SM00448 cheY-homologous receiver domain BL01_07435 SM00862 Transcriptional regulatory protein, C terminal BL01_07440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BL01_07440 SM00387 Histidine kinase-like ATPases BL01_07440 SM00388 His Kinase A (phosphoacceptor) domain BL01_07450 SM00267 diguanylate cyclase BL01_07475 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BL01_07480 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BL01_07480 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BL01_07525 SM00357 Cold shock protein domain BL01_07665 SM00382 ATPases associated with a variety of cellular activities BL01_07665 SM00962 SRP54-type protein, GTPase domain BL01_07665 SM00963 SRP54-type protein, helical bundle domain BL01_07685 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_07695 SM00771 ZipA, C-terminal domain (FtsZ-binding) BL01_07700 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BL01_07700 SM00292 breast cancer carboxy-terminal domain BL01_07700 SM00532 Ligase N family BL01_07750 SM00363 S4 RNA-binding domain BL01_07785 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BL01_07790 SM00822 BL01_07790 BL01_07800 SM00257 Lysin motif BL01_07845 SM01400 BL01_07845 BL01_07880 SM00028 Tetratricopeptide repeats BL01_07890 SM00400 zinc finger BL01_07890 SM00493 BL01_07890 BL01_07900 SM00363 S4 RNA-binding domain BL01_07945 SM01329 BL01_07945 BL01_08005 SM00825 Beta-ketoacyl synthase BL01_08025 SM00838 Elongation factor G C-terminus BL01_08025 SM00889 Elongation factor G, domain IV BL01_08040 SM00882 Coenzyme A transferase BL01_08045 SM00882 Coenzyme A transferase BL01_08100 SM00567 E-Z type HEAT repeats BL01_08105 SM00382 ATPases associated with a variety of cellular activities BL01_08130 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_08130 SM00866 BL01_08130 BL01_08150 SM00342 helix_turn_helix, arabinose operon control protein BL01_08175 SM00849 Metallo-beta-lactamase superfamily BL01_08180 SM00382 ATPases associated with a variety of cellular activities BL01_08190 SM00829 Enoylreductase BL01_08210 SM00861 Transketolase, pyrimidine binding domain BL01_08220 SM00729 Elongator protein 3, MiaB family, Radical SAM BL01_08235 SM00267 diguanylate cyclase BL01_08260 SM00382 ATPases associated with a variety of cellular activities BL01_08290 SM00341 Helicase and RNase D C-terminal BL01_08290 SM00474 3'-5' exonuclease BL01_08295 SM00493 BL01_08295 BL01_08345 SM01324 BL01_08345 BL01_08385 SM00382 ATPases associated with a variety of cellular activities BL01_08445 SM00855 Phosphoglycerate mutase family BL01_08475 SM01006 Siderophore biosynthesis protein domain BL01_08565 SM00342 helix_turn_helix, arabinose operon control protein BL01_08575 SM00411 bacterial (prokaryotic) histone like domain BL01_08610 SM00271 DnaJ molecular chaperone homology domain BL01_08625 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BL01_08635 SM00487 DEAD-like helicases superfamily BL01_08635 SM00490 helicase superfamily c-terminal domain BL01_08635 SM00982 BL01_08635 BL01_08635 SM01058 CarD-like/TRCF domain BL01_08690 SM00382 ATPases associated with a variety of cellular activities BL01_08725 SM01092 CO dehydrogenase flavoprotein C-terminal domain BL01_08730 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BL01_08740 SM00463 Small MutS-related domain BL01_08780 SM01230 BL01_08780 BL01_08835 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BL01_08845 SM00919 Malic enzyme, NAD binding domain BL01_08845 SM01274 BL01_08845 BL01_08850 SM00052 Putative diguanylate phosphodiesterase BL01_08850 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BL01_08850 SM00091 PAS domain BL01_08850 SM00267 diguanylate cyclase BL01_08865 SM00996 S-adenosyl-L-homocysteine hydrolase BL01_08865 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BL01_08885 SM00729 Elongator protein 3, MiaB family, Radical SAM BL01_08935 SM00342 helix_turn_helix, arabinose operon control protein BL01_08985 SM00382 ATPases associated with a variety of cellular activities BL01_09000 SM00479 BL01_09000 BL01_09045 SM00062 Bacterial periplasmic substrate-binding proteins BL01_09060 SM00382 ATPases associated with a variety of cellular activities BL01_09080 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_09105 SM00382 ATPases associated with a variety of cellular activities BL01_09115 SM00448 cheY-homologous receiver domain BL01_09115 SM00862 Transcriptional regulatory protein, C terminal BL01_09120 SM00387 Histidine kinase-like ATPases BL01_09120 SM00388 His Kinase A (phosphoacceptor) domain BL01_09175 SM00830 Chorismate mutase type II BL01_09240 SM00357 Cold shock protein domain BL01_09245 SM00487 DEAD-like helicases superfamily BL01_09245 SM00490 helicase superfamily c-terminal domain BL01_09265 SM00855 Phosphoglycerate mutase family BL01_09345 SM00220 Serine/Threonine protein kinases, catalytic domain BL01_09420 SM01034 Sensors of blue-light using FAD BL01_09435 SM00342 helix_turn_helix, arabinose operon control protein BL01_09455 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_09455 SM00895 BL01_09455 BL01_09570 SM00530 Helix-turn-helix XRE-family like proteins BL01_09590 SM00421 helix_turn_helix, Lux Regulon BL01_09590 SM00448 cheY-homologous receiver domain BL01_09600 SM00387 Histidine kinase-like ATPases BL01_09600 SM00388 His Kinase A (phosphoacceptor) domain BL01_09600 SM00448 cheY-homologous receiver domain BL01_09630 SM00267 diguanylate cyclase BL01_09650 SM00829 Enoylreductase BL01_09695 SM00530 Helix-turn-helix XRE-family like proteins BL01_09705 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_09785 SM00342 helix_turn_helix, arabinose operon control protein BL01_09800 SM00671 Sel1-like repeats. BL01_09855 SM00477 DNA/RNA non-specific endonuclease BL01_09855 SM00892 DNA/RNA non-specific endonuclease BL01_09875 SM00342 helix_turn_helix, arabinose operon control protein BL01_09895 SM00357 Cold shock protein domain BL01_09915 SM00530 Helix-turn-helix XRE-family like proteins BL01_09925 SM00474 3'-5' exonuclease BL01_09970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BL01_09970 SM00387 Histidine kinase-like ATPases BL01_09970 SM00388 His Kinase A (phosphoacceptor) domain BL01_09975 SM00448 cheY-homologous receiver domain BL01_09975 SM00862 Transcriptional regulatory protein, C terminal BL01_09980 SM00316 Ribosomal protein S1-like RNA-binding domain BL01_09980 SM00732 Likely ribonuclease with RNase H fold. BL01_09985 SM00947 Carbonic anhydrase BL01_10000 SM00382 ATPases associated with a variety of cellular activities BL01_10005 SM00671 Sel1-like repeats. BL01_10170 SM00842 Cell division protein FtsA BL01_10190 SM00965 Secretin and TonB N terminus short domain BL01_10270 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BL01_10270 SM00954 Region found in RelA / SpoT proteins BL01_10275 SM01409 BL01_10275 BL01_10280 SM00072 Guanylate kinase homologues. BL01_10470 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BL01_10470 SM01232 BL01_10470 BL01_10490 SM00838 Elongation factor G C-terminus BL01_10555 SM00564 beta-propeller repeat BL01_10570 SM00342 helix_turn_helix, arabinose operon control protein BL01_10620 SM00957 SecA DEAD-like domain BL01_10620 SM00958 SecA preprotein cross-linking domain BL01_10630 SM00849 Metallo-beta-lactamase superfamily BL01_10660 SM00342 helix_turn_helix, arabinose operon control protein BL01_10720 SM00448 cheY-homologous receiver domain BL01_10720 SM00862 Transcriptional regulatory protein, C terminal BL01_10725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BL01_10725 SM00387 Histidine kinase-like ATPases BL01_10725 SM00388 His Kinase A (phosphoacceptor) domain BL01_10850 SM00387 Histidine kinase-like ATPases BL01_10850 SM00388 His Kinase A (phosphoacceptor) domain BL01_10880 SM01323 BL01_10880 BL01_10910 SM00481 DNA polymerase alpha chain like domain BL01_10935 SM00450 Rhodanese Homology Domain BL01_11170 SM00342 helix_turn_helix, arabinose operon control protein BL01_11200 SM00903 Flavin reductase like domain BL01_11250 SM01130 BL01_11250 BL01_11270 SM00965 Secretin and TonB N terminus short domain BL01_11390 SM01322 BL01_11390 BL01_11430 SM00346 helix_turn_helix isocitrate lyase regulation BL01_11450 SM00822 BL01_11450 BL01_11525 SM00342 helix_turn_helix, arabinose operon control protein BL01_11550 SM00822 BL01_11550 BL01_11565 SM00861 Transketolase, pyrimidine binding domain BL01_11570 SM01018 B12 binding domain BL01_11630 SM00947 Carbonic anhydrase BL01_11640 SM00382 ATPases associated with a variety of cellular activities BL01_11735 SM00563 Phosphate acyltransferases BL01_11805 SM00382 ATPases associated with a variety of cellular activities BL01_11855 SM01004 Delta-aminolevulinic acid dehydratase BL01_11895 SM00901 BL01_11895 BL01_11945 SM00479 BL01_11945 BL01_12040 SM00382 ATPases associated with a variety of cellular activities BL01_12225 SM00342 helix_turn_helix, arabinose operon control protein BL01_12240 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BL01_12250 SM00411 bacterial (prokaryotic) histone like domain BL01_12255 SM00316 Ribosomal protein S1-like RNA-binding domain BL01_12280 SM00986 Uracil DNA glycosylase superfamily BL01_12280 SM00987 UreE urease accessory protein, C-terminal domain BL01_12340 SM00382 ATPases associated with a variety of cellular activities BL01_12355 SM00470 ParB-like nuclease domain BL01_12415 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BL01_12425 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BL01_12485 SM00448 cheY-homologous receiver domain BL01_12485 SM00862 Transcriptional regulatory protein, C terminal BL01_12490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BL01_12490 SM00387 Histidine kinase-like ATPases BL01_12490 SM00388 His Kinase A (phosphoacceptor) domain BL01_12500 SM00342 helix_turn_helix, arabinose operon control protein BL01_12510 SM00822 BL01_12510 BL01_12515 SM00822 BL01_12515 BL01_12555 SM00530 Helix-turn-helix XRE-family like proteins BL01_12615 SM00849 Metallo-beta-lactamase superfamily BL01_12625 SM00382 ATPases associated with a variety of cellular activities BL01_12625 SM00930 BL01_12625 BL01_12635 SM01209 BL01_12635 BL01_12635 SM01210 BL01_12635 BL01_12640 SM00798 AICARFT/IMPCHase bienzyme BL01_12640 SM00851 MGS-like domain BL01_12665 SM01228 BL01_12665 BL01_12690 SM00460 Transglutaminase/protease-like homologues BL01_12700 SM01005 Alanine racemase, C-terminal domain BL01_12790 SM00382 ATPases associated with a variety of cellular activities BL01_12790 SM00994 ClpX C4-type zinc finger BL01_12790 SM01086 C-terminal, D2-small domain, of ClpB protein BL01_12810 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BL01_12815 SM00917 LeuA allosteric (dimerisation) domain BL01_12830 SM00671 Sel1-like repeats. BL01_12970 SM00360 RNA recognition motif BL01_12990 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BL01_12990 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BL01_12990 SM00493 BL01_12990 BL01_13005 SM00829 Enoylreductase BL01_13015 SM00382 ATPases associated with a variety of cellular activities BL01_13045 SM00859 Semialdehyde dehydrogenase, NAD binding domain BL01_13060 SM00870 BL01_13060 BL01_13070 SM00342 helix_turn_helix, arabinose operon control protein BL01_13075 SM00316 Ribosomal protein S1-like RNA-binding domain BL01_13090 SM01329 BL01_13090 BL01_13140 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BL01_13185 SM00248 ankyrin repeats BL01_13220 SM00382 ATPases associated with a variety of cellular activities BL01_13220 SM01086 C-terminal, D2-small domain, of ClpB protein BL01_13295 SM00382 ATPases associated with a variety of cellular activities BL01_13335 SM00796 Allophanate hydrolase subunit 1 BL01_13335 SM00797 Allophanate hydrolase subunit 2 BL01_13335 SM00878 Biotin carboxylase C-terminal domain BL01_13350 SM00829 Enoylreductase BL01_13380 SM00671 Sel1-like repeats. BL01_13390 SM00878 Biotin carboxylase C-terminal domain BL01_13395 SM00796 Allophanate hydrolase subunit 1 BL01_13395 SM00797 Allophanate hydrolase subunit 2 BL01_13470 SM00422 helix_turn_helix, mercury resistance BL01_13495 SM00052 Putative diguanylate phosphodiesterase BL01_13505 SM00344 helix_turn_helix ASNC type BL01_13515 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BL01_13515 SM00534 ATPase domain of DNA mismatch repair MUTS family BL01_13560 SM00382 ATPases associated with a variety of cellular activities BL01_13570 SM00382 ATPases associated with a variety of cellular activities BL01_13590 SM00116 Domain in cystathionine beta-synthase and other proteins. BL01_13595 SM00840 BL01_13595 BL01_13665 SM00357 Cold shock protein domain BL01_13690 SM00530 Helix-turn-helix XRE-family like proteins BL01_13740 SM00422 helix_turn_helix, mercury resistance BL01_13800 SM00382 ATPases associated with a variety of cellular activities BL01_13800 SM00487 DEAD-like helicases superfamily BL01_13800 SM00490 helicase superfamily c-terminal domain BL01_13800 SM00847 Helicase associated domain (HA2) Add an annotation BL01_13880 SM00981 BL01_13880 BL01_13895 SM00382 ATPases associated with a variety of cellular activities BL01_13895 SM01086 C-terminal, D2-small domain, of ClpB protein BL01_14065 SM00073 Histidine Phosphotransfer domain BL01_14065 SM00260 Two component signalling adaptor domain BL01_14065 SM00387 Histidine kinase-like ATPases BL01_14065 SM00448 cheY-homologous receiver domain BL01_14065 SM01231 BL01_14065 BL01_14070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BL01_14075 SM00260 Two component signalling adaptor domain BL01_14080 SM00448 cheY-homologous receiver domain BL01_14085 SM00448 cheY-homologous receiver domain BL01_14140 SM00671 Sel1-like repeats. BL01_14160 SM00382 ATPases associated with a variety of cellular activities BL01_14160 SM00464 Found in ATP-dependent protease La (LON) BL01_14180 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BL01_14190 SM00478 endonuclease III BL01_14240 SM00988 UreE urease accessory protein, N-terminal domain BL01_14290 SM01091 Transporter associated domain BL01_14355 SM00822 BL01_14355 BL01_14385 SM00344 helix_turn_helix ASNC type BL01_14400 SM00831 Cation transporter/ATPase, N-terminus BL01_14425 SM00382 ATPases associated with a variety of cellular activities BL01_14485 SM01011 Aminopeptidase P, N-terminal domain BL01_14505 SM00422 helix_turn_helix, mercury resistance BL01_14560 SM00479 BL01_14560 BL01_14565 SM00257 Lysin motif BL01_14585 SM00382 ATPases associated with a variety of cellular activities BL01_14605 SM00479 BL01_14605 BL01_14615 SM00267 diguanylate cyclase BL01_14860 SM00849 Metallo-beta-lactamase superfamily BL01_14885 SM00235 Zinc-dependent metalloprotease BL01_14890 SM00235 Zinc-dependent metalloprotease BL01_14910 SM01001 AIR carboxylase BL01_14935 SM00014 Acid phosphatase homologues BL01_15005 SM01234 BL01_15005 BL01_15020 SM00382 ATPases associated with a variety of cellular activities BL01_15020 SM00760 Bacterial dnaA protein helix-turn-helix domain BL01_15025 SM00480 DNA polymerase III beta subunit BL01_15035 SM00387 Histidine kinase-like ATPases BL01_15035 SM00433 TopoisomeraseII BL01_15050 SM00382 ATPases associated with a variety of cellular activities BL01_15570 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BL01_15575 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BL01_15585 SM00788 Adenylosuccinate synthetase BL01_15610 SM00267 diguanylate cyclase BL01_15625 SM00155 Phospholipase D. Active site motifs. BL01_15630 SM00563 Phosphate acyltransferases BL01_15660 SM00650 Ribosomal RNA adenine dimethylases BL01_15695 SM00878 Biotin carboxylase C-terminal domain BL01_15745 SM01236 BL01_15745 BL01_15820 SM00422 helix_turn_helix, mercury resistance BL01_15830 SM00729 Elongator protein 3, MiaB family, Radical SAM BL01_15850 SM00641 Glycosyl hydrolases family 25 BL01_15865 SM01091 Transporter associated domain BL01_15885 SM00434 DNA Topoisomerase IV BL01_15920 SM00421 helix_turn_helix, Lux Regulon BL01_16000 SM01400 BL01_16000 BL01_16010 SM00342 helix_turn_helix, arabinose operon control protein BL01_16020 SM00382 ATPases associated with a variety of cellular activities BL01_16035 SM00829 Enoylreductase BL01_16050 SM00342 helix_turn_helix, arabinose operon control protein BL01_16100 SM00855 Phosphoglycerate mutase family BL01_16115 SM00091 PAS domain BL01_16115 SM00382 ATPases associated with a variety of cellular activities BL01_16135 SM00829 Enoylreductase BL01_16155 SM01060 BL01_16155 BL01_16180 SM00347 helix_turn_helix multiple antibiotic resistance protein BL01_16200 SM00422 helix_turn_helix, mercury resistance BL01_16275 SM00912 haemagglutination activity domain BL01_16310 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_16310 SM00866 BL01_16310 BL01_16340 SM00346 helix_turn_helix isocitrate lyase regulation BL01_16405 SM00342 helix_turn_helix, arabinose operon control protein BL01_16405 SM00871 Bacterial transcription activator, effector binding domain BL01_16415 SM00382 ATPases associated with a variety of cellular activities BL01_16430 SM00862 Transcriptional regulatory protein, C terminal BL01_16495 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BL01_16495 SM00474 3'-5' exonuclease BL01_16495 SM00475 5'-3' exonuclease BL01_16495 SM00482 DNA polymerase A domain BL01_16510 SM00977 TilS substrate C-terminal domain BL01_16530 SM00357 Cold shock protein domain BL01_16530 SM00382 ATPases associated with a variety of cellular activities BL01_16530 SM00959 Rho termination factor, N-terminal domain BL01_16540 SM00411 bacterial (prokaryotic) histone like domain BL01_16545 SM00873 B3/4 domain BL01_16545 SM00874 tRNA synthetase B5 domain BL01_16545 SM00896 Ferredoxin-fold anticodon binding domain BL01_16600 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BL01_16645 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BL01_16660 SM00954 Region found in RelA / SpoT proteins BL01_16680 SM00073 Histidine Phosphotransfer domain BL01_16680 SM00387 Histidine kinase-like ATPases BL01_16680 SM00388 His Kinase A (phosphoacceptor) domain BL01_16680 SM00448 cheY-homologous receiver domain BL01_16720 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BL01_16720 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BL01_16790 SM01236 BL01_16790 BL01_16805 SM00052 Putative diguanylate phosphodiesterase BL01_16805 SM00267 diguanylate cyclase BL01_16850 SM00382 ATPases associated with a variety of cellular activities BL01_16870 SM00479 BL01_16870 BL01_16880 SM00450 Rhodanese Homology Domain BL01_16905 SM00825 Beta-ketoacyl synthase BL01_16910 SM00822 BL01_16910 BL01_16920 SM00825 Beta-ketoacyl synthase BL01_16985 SM00563 Phosphate acyltransferases BL01_17000 SM00564 beta-propeller repeat BL01_17025 SM00028 Tetratricopeptide repeats BL01_17035 SM00562 BL01_17035 BL01_17045 SM00014 Acid phosphatase homologues BL01_17055 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BL01_17055 SM00245 tail specific protease BL01_17160 SM00937 BL01_17160 BL01_17175 SM00062 Bacterial periplasmic substrate-binding proteins BL01_17180 SM00342 helix_turn_helix, arabinose operon control protein BL01_17185 SM00822 BL01_17185 BL01_17200 SM00903 Flavin reductase like domain BL01_17215 SM00905 Dihydroneopterin aldolase BL01_17240 SM00387 Histidine kinase-like ATPases BL01_17240 SM00388 His Kinase A (phosphoacceptor) domain BL01_17245 SM00448 cheY-homologous receiver domain BL01_17245 SM00862 Transcriptional regulatory protein, C terminal BL01_17250 SM01230 BL01_17250 BL01_17330 SM00363 S4 RNA-binding domain BL01_17355 SM00853 MutL C terminal dimerisation domain BL01_17355 SM01340 BL01_17355 BL01_17440 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BL01_17470 SM00729 Elongator protein 3, MiaB family, Radical SAM BL01_17520 SM00342 helix_turn_helix, arabinose operon control protein BL01_17630 SM00938 Nitrogen regulatory protein P-II BL01_17695 SM00245 tail specific protease BL01_17700 SM00382 ATPases associated with a variety of cellular activities BL01_17700 SM00448 cheY-homologous receiver domain BL01_17705 SM00387 Histidine kinase-like ATPases BL01_17705 SM00388 His Kinase A (phosphoacceptor) domain BL01_17710 SM00421 helix_turn_helix, Lux Regulon BL01_17710 SM00448 cheY-homologous receiver domain BL01_17740 SM00899 BL01_17740 BL01_17830 SM00448 cheY-homologous receiver domain BL01_17830 SM00850 LytTr DNA-binding domain BL01_17860 SM00528 Domain in histone-like proteins of HNS family BL01_17870 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BL01_17880 SM00240 Forkhead associated domain BL01_18080 SM00342 helix_turn_helix, arabinose operon control protein BL01_18105 SM00345 helix_turn_helix gluconate operon transcriptional repressor BL01_18105 SM00895 BL01_18105 BL01_18115 SM01130 BL01_18115 BL01_18130 SM00422 helix_turn_helix, mercury resistance BL01_18185 SM00344 helix_turn_helix ASNC type BL01_18220 SM00867 YceI-like domain BL01_18230 SM00861 Transketolase, pyrimidine binding domain BL01_18265 SM00530 Helix-turn-helix XRE-family like proteins BL01_18285 SM00729 Elongator protein 3, MiaB family, Radical SAM BL01_18285 SM00876 Biotin and Thiamin Synthesis associated domain BL01_18290 SM00564 beta-propeller repeat BL01_18350 SM00382 ATPases associated with a variety of cellular activities BL01_18435 SM00972 Spore Coat Protein U domain BL01_18460 SM00972 Spore Coat Protein U domain BL01_18470 SM00331 Sigma factor PP2C-like phosphatases BL01_18490 SM00347 helix_turn_helix multiple antibiotic resistance protein BL01_18500 SM00382 ATPases associated with a variety of cellular activities BL01_18540 SM00530 Helix-turn-helix XRE-family like proteins BL01_18570 SM00287 Bacterial SH3 domain homologues BL01_18805 SM00342 helix_turn_helix, arabinose operon control protein BL01_18815 SM00382 ATPases associated with a variety of cellular activities BL01_18845 SM00857 Resolvase, N terminal domain BL01_18910 SM01007 Class II Aldolase and Adducin N-terminal domain BL01_18915 SM01130 BL01_18915 BL01_18990 SM00530 Helix-turn-helix XRE-family like proteins BL01_19110 SM00857 Resolvase, N terminal domain BL01_19390 SM00100 Cyclic nucleotide-monophosphate binding domain BL01_19390 SM00419 helix_turn_helix, cAMP Regulatory protein BL01_p0010 SM00671 Sel1-like repeats. BL01_p0145 SM00470 ParB-like nuclease domain BL01_p0200 SM00528 Domain in histone-like proteins of HNS family BL01_p0210 SM00318 Staphylococcal nuclease homologues BL01_p0410 SM00857 Resolvase, N terminal domain BL01_p0520 SM00344 helix_turn_helix ASNC type BL01_p0525 SM00830 Chorismate mutase type II